80	36.0	1.3	3.1	chr1	888310	888696	(248067726)	+	A-rich	Low_complexity	1	392	(0)	1126
860	15.2	0.8	0.0	chr1	1019128	1019259	(247937163)	C	AluJr4	SINE/Alu	(179)	133	1	1289
20	16.6	0.0	0.0	chr1	1019467	1019507	(247936915)	+	G-rich	Low_complexity	1	41	(0)	1290
636	23.7	9.9	0.0	chr1	1148309	1148481	(247807941)	+	L1MC4	LINE/L1	6737	6928	(1114)	1411
212	29.0	2.0	1.8	chr1	2155082	2155347	(246801075)	+	(TGGTGA)n	Simple_repeat	1	266	(0)	2937
28	11.1	1.6	1.6	chr1	2155348	2155409	(246801013)	+	(GGTGATGAC)n	Simple_repeat	1	63	(0)	2938
212	29.0	2.0	1.8	chr1	2155410	2155848	(246800574)	+	(TGGTGA)n	Simple_repeat	6	439	(0)	2939
604	25.1	7.3	0.6	chr1	2525516	2525721	(246430701)	+	MIR	SINE/MIR	11	227	(35)	3280
2393	9.5	0.0	0.0	chr1	2536642	2536946	(246419476)	C	AluSq2	SINE/Alu	(8)	305	1	3295
66	34.3	0.0	0.9	chr1	2536970	2537200	(246419222)	+	(TG)n	Simple_repeat	1	231	(0)	3296
335	24.5	0.1	0.4	chr1	4647039	4647789	(244308633)	+	(TGG)n	Simple_repeat	1	752	(0)	5634
254	35.0	8.8	0.6	chr1	4652992	4653169	(244303253)	C	MIRb	SINE/MIR	(71)	197	4	5642
173	20.9	3.2	2.3	chr1	5829419	5829880	(243126542)	+	(GATGGT)n	Simple_repeat	1	477	(0)	7338
11810	21.5	2.7	3.5	chr1	6568483	6570024	(242386398)	C	HERVFH21-int	LTR/ERV1	(5011)	1518	48	8471
2480	7.4	0.0	0.0	chr1	6936711	6937006	(242019416)	+	AluY	SINE/Alu	5	300	(11)	9151
384	14.5	3.2	4.3	chr1	6937033	6937918	(242018504)	+	(CACCAT)n	Simple_repeat	1	914	(0)	9152
69	12.4	0.0	0.0	chr1	7932654	7932761	(241023661)	+	(CACA)n	Simple_repeat	1	108	(0)	10592
806	20.5	3.2	5.0	chr1	7932833	7933053	(241023369)	C	MER20	DNA/hAT-Charlie	(0)	219	3	10593
24	7.7	2.2	4.3	chr1	8789298	8789325	(240167097)	+	(TA)n	Simple_repeat	1	28	(0)	12253
395	27.9	17.4	4.5	chr1	9017868	9018179	(239938243)	+	L2	LINE/L2	1726	2086	(1333)	12761
2455	6.9	1.3	0.3	chr1	9258984	9259287	(239697135)	C	AluY	SINE/Alu	(4)	307	1	13263
2159	10.5	1.7	0.0	chr1	9266825	9267119	(239689303)	C	AluSx1	SINE/Alu	(12)	300	1	13270
46	14.3	1.1	3.2	chr1	9587856	9587949	(239368473)	+	(CTTT)n	Simple_repeat	1	95	(0)	13953
2590	3.0	0.0	0.3	chr1	9587953	9588249	(239368173)	C	AluY	SINE/Alu	(15)	296	1	13954
12	20.2	0.0	6.7	chr1	9823796	9823840	(239132582)	+	G-rich	Low_complexity	1	45	(0)	14454
15	0.0	0.0	0.0	chr1	9823863	9823881	(239132541)	+	(GCC)n	Simple_repeat	1	19	(0)	14455
662	28.2	13.9	3.0	chr1	10799724	10800195	(238156227)	+	L2a	LINE/L2	2865	3401	(25)	16357
180	30.6	1.2	2.0	chr1	11702057	11702705	(237253717)	+	(CA)n	Simple_repeat	1	657	(0)	18271
75	22.8	5.4	1.2	chr1	11730176	11730416	(237226006)	+	(GCACAT)n	Simple_repeat	1	254	(0)	18338
527	28.1	12.0	1.5	chr1	11798612	11798728	(237157694)	C	Charlie16a	DNA/hAT-Charlie	(0)	342	210	18477
2368	9.3	0.0	1.0	chr1	11798729	11799041	(237157381)	C	AluSg	SINE/Alu	(0)	310	1	18478
2374	8.8	0.0	0.0	chr1	11804183	11804478	(237151944)	+	AluSq2	SINE/Alu	18	313	(0)	18486
1932	20.8	9.1	3.2	chr1	11851172	11851669	(237104753)	C	MLT1F2	LTR/ERVL-MaLR	(26)	534	5	18562
14	6.5	5.6	5.3	chr1	11882816	11882854	(237073568)	+	(CTCCT)n	Simple_repeat	1	39	(0)	18639
2297	9.2	0.3	0.0	chr1	12013800	12014093	(236942329)	C	AluSg7	SINE/Alu	(6)	303	9	18953
16	5.3	0.0	0.0	chr1	12014094	12014113	(236942309)	+	(T)n	Simple_repeat	1	20	(0)	18954
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
33	3.1	0.0	0.0	chr1	12433918	12433950	(236522472)	+	(GA)n	Simple_repeat	1	33	(0)	19789
18	0.0	0.0	0.0	chr1	12433951	12433970	(236522452)	+	(TG)n	Simple_repeat	1	20	(0)	19790
14	0.0	0.0	0.0	chr1	12433970	12433987	(236522435)	+	(GGA)n	Simple_repeat	1	18	(0)	19791
184	41.2	5.7	2.0	chr1	13681919	13682069	(235274353)	C	L2b	LINE/L2	(181)	3194	3038	21887
113	21.1	4.4	0.6	chr1	14474881	14475178	(234481244)	+	(ATGG)n	Simple_repeat	1	311	(0)	23251
348	29.5	11.3	1.3	chr1	14777445	14777701	(234178721)	+	L2a	LINE/L2	2845	3122	(304)	23835
3108	11.8	0.2	0.4	chr1	14777711	14778169	(234178253)	C	MER41B	LTR/ERV1	(155)	479	22	23836
292	26.7	1.2	0.4	chr1	14844992	14845599	(234110823)	+	(TGGA)n	Simple_repeat	2	615	(0)	23983
1240	28.3	9.0	0.9	chr1	15543052	15543759	(233412663)	C	L2a	LINE/L2	(20)	3406	2647	25505
436	29.3	4.2	3.8	chr1	15543761	15543998	(233412424)	C	L2-1_AMi	LINE/L2	(540)	695	457	25506
371	31.2	8.3	0.7	chr1	15952815	15952969	(233003453)	+	MLT1H	LTR/ERVL-MaLR	321	488	(1)	26388
286	19.5	4.7	2.4	chr1	15952974	15953057	(233003365)	+	L1ME3D	LINE/L1	5983	6068	(174)	26389
57	23.6	4.6	1.1	chr1	15988958	15989131	(232967291)	+	(CT)n	Simple_repeat	1	182	(0)	26467
44	32.8	0.0	0.0	chr1	16111915	16112057	(232844365)	+	(CA)n	Simple_repeat	1	143	(0)	26714
13	9.3	0.0	0.0	chr1	16221505	16221527	(232734895)	+	(TGGA)n	Simple_repeat	1	23	(0)	26956
31	0.0	3.0	0.0	chr1	16221577	16221609	(232734813)	+	(GGAT)n	Simple_repeat	1	34	(0)	26957
60	30.3	3.5	1.7	chr1	16221635	16221658	(232734764)	+	(TGGA)n	Simple_repeat	1	24	(0)	26958
35	9.1	1.7	0.0	chr1	16221659	16221717	(232734705)	+	(GGAT)n	Simple_repeat	1	60	(0)	26959
60	30.3	3.5	1.7	chr1	16221718	16221976	(232734446)	+	(TGGA)n	Simple_repeat	1	264	(0)	26960
328	33.2	10.0	0.0	chr1	16221979	16222266	(232734156)	C	L2a	LINE/L2	(0)	3426	3036	26961
603	30.5	12.7	4.5	chr1	17352256	17352897	(231603525)	C	L2	LINE/L2	(419)	3000	2299	29231
294	35.5	6.8	1.6	chr1	17520778	17520970	(231435452)	C	MIR3	SINE/MIR	(3)	205	6	29621
222	38.6	2.2	1.7	chr1	18801296	18802679	(230153743)	+	(AACACC)n	Simple_repeat	3	1396	(0)	32449
488	19.9	0.9	10.2	chr1	19870336	19870422	(229086000)	+	L1ME3Cz	LINE/L1	558	611	(386)	34678
1832	13.4	6.2	2.0	chr1	20184872	20185163	(228771259)	+	AluJb	SINE/Alu	1	305	(7)	35260
353	33.3	10.2	3.8	chr1	21320235	21320418	(227636004)	+	MIRb	SINE/MIR	66	262	(6)	37659
28	21.0	4.2	4.0	chr1	21346056	21346150	(227610272)	+	(TG)n	Simple_repeat	1	99	(0)	37720
47	0.0	0.0	0.0	chr1	21346175	21346214	(227610208)	+	(GT)n	Simple_repeat	1	40	(0)	37721
455	34.5	3.3	9.7	chr1	21642814	21642875	(227313547)	+	L2b	LINE/L2	3040	3097	(278)	38363
47	0.0	0.0	0.0	chr1	21642876	21642915	(227313507)	+	(AC)n	Simple_repeat	1	40	(0)	38364
455	34.5	3.3	9.7	chr1	21642916	21643212	(227313210)	+	L2b	LINE/L2	3098	3375	(0)	38363
3255	15.4	3.0	4.9	chr1	21791392	21791926	(227164496)	C	MER41B	LTR/ERV1	(37)	597	73	38679
2017	9.4	0.0	0.4	chr1	21791927	21792182	(227164240)	+	AluY	SINE/Alu	1	255	(56)	38680
678	31.1	12.2	3.1	chr1	21811591	21811978	(227144444)	C	L2a	LINE/L2	(0)	3426	2999	38742
195	36.1	3.2	14.8	chr1	21905067	21905149	(227051273)	+	L2a	LINE/L2	2842	2921	(498)	38919
43	5.8	1.9	0.0	chr1	21905150	21905203	(227051219)	+	(AC)n	Simple_repeat	1	55	(0)	38920
195	36.1	3.2	14.8	chr1	21905204	21905236	(227051186)	+	L2a	LINE/L2	2922	2935	(484)	38919
36	7.2	0.0	0.0	chr1	21905237	21905280	(227051142)	+	(AC)n	Simple_repeat	1	44	(0)	38921
274	28.8	7.9	3.7	chr1	21905281	21905457	(227050965)	+	L2a	LINE/L2	2936	3145	(281)	38919
188	20.0	1.3	2.8	chr1	22333591	22334043	(226622379)	+	(TGGA)n	Simple_repeat	1	459	(0)	39927
50	3.2	1.5	2.9	chr1	22334071	22334137	(226622285)	+	(TGGA)n	Simple_repeat	1	68	(0)	39927
819	30.7	11.5	3.6	chr1	22403832	22404270	(226552152)	C	L2c	LINE/L2	(0)	3387	2910	40090
1186	16.2	9.7	2.3	chr1	23920659	23920924	(225035498)	+	MER31B	LTR/ERV1	1	288	(178)	43715
1094	17.2	4.0	0.5	chr1	23920924	23921139	(225035283)	+	LTR54	LTR/ERV1	8	231	(279)	43716
1939	13.4	1.7	4.4	chr1	23921148	23921445	(225034977)	C	AluSz	SINE/Alu	(22)	290	1	43717
2420	9.2	0.3	0.0	chr1	25285130	25285433	(223670989)	C	AluSp	SINE/Alu	(8)	305	1	46783
1011	29.1	12.0	0.6	chr1	26070420	26070913	(222885509)	+	MLT1L	LTR/ERVL-MaLR	41	598	(12)	48480
58	35.2	1.2	0.4	chr1	26352182	26352425	(222603997)	+	(CA)n	Simple_repeat	1	247	(0)	49133
1688	15.8	0.0	0.0	chr1	26399253	26399493	(222556929)	C	AluJb	SINE/Alu	(71)	241	1	49257
1402	10.9	0.0	0.0	chr1	26399502	26399684	(222556738)	C	AluSx1	SINE/Alu	(5)	307	125	49258
1856	16.4	1.0	0.3	chr1	27073914	27074200	(221882222)	+	AluJo	SINE/Alu	1	289	(23)	50861
349	26.0	17.3	2.9	chr1	27074201	27074352	(221882070)	+	ERVL-E-int	LTR/ERVL	4702	4878	(789)	50855
403	30.4	16.9	0.2	chr1	27542523	27542734	(221413688)	C	MIRb	SINE/MIR	(4)	258	8	52004
374	33.5	12.3	4.7	chr1	27608251	27608699	(221347723)	+	L2c	LINE/L2	2820	3320	(67)	52111
49	0.0	0.0	0.0	chr1	27608842	27608883	(221347539)	+	(GT)n	Simple_repeat	1	42	(0)	52113
30	0.0	0.0	0.0	chr1	27608903	27608928	(221347494)	+	(GT)n	Simple_repeat	1	26	(0)	52113
16	5.3	0.0	0.0	chr1	27608948	27608967	(221347455)	+	(GT)n	Simple_repeat	1	20	(0)	52113
49	0.0	0.0	0.0	chr1	27608987	27609028	(221347394)	+	(GT)n	Simple_repeat	1	42	(0)	52113
81	39.1	0.2	0.7	chr1	27624471	27624876	(221331546)	+	(TG)n	Simple_repeat	1	407	(0)	52148
1561	30.6	10.7	5.9	chr1	27719942	27720396	(221236026)	+	L2b	LINE/L2	2804	3288	(87)	52377
24	26.6	2.3	6.0	chr1	28176933	28177063	(220779359)	+	G-rich	Low_complexity	1	134	(0)	53455
16	17.2	0.0	7.5	chr1	28177123	28177175	(220779247)	+	(GACAA)n	Simple_repeat	1	53	(0)	53456
1252	9.7	0.0	0.6	chr1	28506775	28506950	(220449472)	C	AluSg	SINE/Alu	(85)	225	51	54375
523	28.9	6.8	0.0	chr1	28511132	28511292	(220445130)	+	MIR	SINE/MIR	34	206	(56)	54385
1874	7.9	10.4	0.4	chr1	28511390	28511667	(220444755)	C	AluYj4	SINE/Alu	(1)	310	2	54386
1722	8.1	2.3	3.1	chr1	28511977	28512235	(220444187)	C	AluSx1	SINE/Alu	(10)	302	46	54388
916	11.1	0.0	0.7	chr1	28515765	28515899	(220440523)	+	AluSx	SINE/Alu	1	134	(178)	54402
1972	8.8	0.0	0.4	chr1	28515900	28516162	(220440260)	+	AluSq2	SINE/Alu	1	262	(51)	54403
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1568	8.5	0.0	1.5	chr1	28884201	28884400	(220072022)	+	AluSx3	SINE/Alu	105	301	(10)	55400
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
14	19.3	6.4	0.0	chr1	29237124	29237170	(219719252)	+	(GTGTTGT)n	Simple_repeat	1	50	(0)	56234
970	24.3	2.3	2.3	chr1	30756373	30756636	(218199786)	C	MIR	SINE/MIR	(4)	258	2	58992
242	28.4	1.1	4.3	chr1	30756720	30756811	(218199611)	+	L3b	LINE/CR1	4990	5078	(154)	58991
182	30.6	0.0	0.0	chr1	30756942	30756990	(218199432)	C	MIR3	SINE/MIR	(104)	104	56	58993
247	19.8	1.0	0.4	chr1	30839828	30840325	(218116097)	+	(TGGA)n	Simple_repeat	1	503	(0)	59195
2502	16.8	5.4	1.7	chr1	31072137	31072657	(217883765)	C	LTR27C	LTR/ERV1	(226)	541	1	59706
501	16.7	3.6	4.4	chr1	31072661	31072773	(217883649)	+	AluJb	SINE/Alu	198	309	(3)	59702
15	25.6	2.4	0.0	chr1	31739762	31739803	(217216619)	+	(AC)n	Simple_repeat	1	43	(0)	61233
1790	14.4	0.0	2.7	chr1	31803467	31803758	(217152664)	+	AluJr	SINE/Alu	17	300	(12)	61343
38	17.2	1.1	3.4	chr1	31803759	31803846	(217152576)	+	A-rich	Low_complexity	1	89	(0)	61344
766	22.6	4.9	0.1	chr1	31803848	31804127	(217152295)	+	L1MEd	LINE/L1	1082	1392	(5711)	61342
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
1967	11.9	0.0	10.1	chr1	32021613	32021949	(216934473)	C	AluSx	SINE/Alu	(8)	304	2	61891
1754	7.7	4.4	16.6	chr1	32021956	32022293	(216934129)	C	AluSc	SINE/Alu	(10)	299	5	61892
1528	19.9	2.6	3.6	chr1	32133399	32133705	(216822717)	+	AluJo	SINE/Alu	1	304	(8)	62177
717	17.0	1.1	17.8	chr1	32133706	32133762	(216822660)	+	L1M4c	LINE/L1	1582	1629	(4755)	62176
1484	10.6	0.5	0.0	chr1	32133763	32133960	(216822462)	+	AluSx1	SINE/Alu	5	203	(109)	62178
2058	11.5	0.3	4.8	chr1	32133961	32134272	(216822150)	+	AluSx1	SINE/Alu	1	298	(14)	62179
424	26.6	2.6	0.9	chr1	32291676	32291811	(216664611)	+	MIR3	SINE/MIR	37	170	(38)	62538
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
243	28.8	2.6	2.6	chr1	32391107	32391220	(216565202)	C	L2-1_AMi	LINE/L2	(991)	244	131	62768
932	16.5	7.7	0.6	chr1	32722261	32722418	(216234004)	+	FRAM	SINE/Alu	6	175	(1)	63578
58	23.5	1.3	3.5	chr1	32722419	32722598	(216233824)	+	GA-rich	Low_complexity	1	176	(0)	63579
1631	18.8	0.6	8.8	chr1	32722607	32722751	(216233671)	+	AluJb	SINE/Alu	1	145	(167)	63580
268	34.0	4.1	6.4	chr1	32757259	32757556	(216198866)	C	L2	LINE/L2	(556)	2863	2573	63665
85	34.2	1.1	1.8	chr1	34928692	34929068	(214027354)	+	(AC)n	Simple_repeat	1	381	(0)	67682
26889	14.4	4.6	2.4	chr1	35132579	35137611	(213818811)	C	HERVH-int	LTR/ERV1	(2564)	5149	1	68105
60	16.3	3.2	4.3	chr1	35261590	35261745	(213694677)	+	(TTCTCC)n	Simple_repeat	1	161	(0)	68406
512	19.3	23.5	2.1	chr1	35261748	35261887	(213694535)	C	FAM	SINE/Alu	(6)	179	1	68407
13	20.8	2.1	4.1	chr1	36321239	36321286	(212635136)	+	(GGCCTG)n	Simple_repeat	1	49	(0)	70645
3084	21.9	1.3	1.3	chr1	36330791	36331549	(212624873)	+	HERVFH21-int	LTR/ERV1	536	1247	(5282)	70661
283	36.6	7.7	3.3	chr1	36421349	36421681	(212534741)	+	L2c	LINE/L2	3039	3387	(0)	70838
21	4.0	0.0	0.0	chr1	36557735	36557760	(212398662)	+	(TG)n	Simple_repeat	1	26	(0)	71129
1892	17.2	0.0	0.0	chr1	36557761	36558045	(212398377)	C	AluJb	SINE/Alu	(27)	285	1	71130
673	15.0	10.3	0.0	chr1	39711642	39711781	(209244641)	+	LTR50	LTR/ERVL	1	156	(639)	77269
2165	21.4	2.2	2.8	chr1	39711807	39712350	(209244072)	C	MER74A	LTR/ERVL	(17)	541	1	77270
1988	11.2	1.7	6.4	chr1	39733717	39734030	(209222392)	+	AluJb	SINE/Alu	2	300	(12)	77313
81	19.1	3.6	1.0	chr1	39964635	39964827	(208991595)	+	(TG)n	Simple_repeat	1	200	(0)	77802
78	36.3	1.8	2.0	chr1	42146090	42146531	(206809891)	+	(CA)n	Simple_repeat	1	450	(0)	81994
503	29.4	9.3	0.8	chr1	42963300	42963546	(205992876)	+	L2b	LINE/L2	2363	2632	(787)	83439
47	26.7	5.5	3.3	chr1	43057583	43057843	(205898579)	+	(GGTGAT)n	Simple_repeat	1	266	(0)	83687
670	36.8	4.4	2.0	chr1	43143133	43143534	(205812888)	C	L2	LINE/L2	(2783)	636	225	83839
607	34.0	9.0	3.3	chr1	43343872	43344697	(205611725)	+	L2c	LINE/L2	2496	3384	(3)	84182
911	32.5	9.6	1.9	chr1	43345150	43345769	(205610653)	C	L2a	LINE/L2	(91)	3335	2667	84184
1267	32.1	13.1	2.3	chr1	43522548	43523633	(205432789)	C	L2c	LINE/L2	(154)	3233	2005	84451
17	16.9	5.2	8.9	chr1	44074048	44074143	(204882279)	+	(TCTCAT)n	Simple_repeat	1	101	(0)	85376
17	13.5	0.0	0.0	chr1	44610414	44610446	(204345976)	+	(CCCATC)n	Simple_repeat	1	33	(0)	86365
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
731	16.3	0.0	2.8	chr1	44730545	44730685	(204225737)	+	AluJr	SINE/Alu	175	311	(1)	86587
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
581	20.9	3.5	0.0	chr1	44819555	44819664	(204136758)	C	AluSx3	SINE/Alu	(17)	294	181	86770
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
2218	10.6	0.0	0.0	chr1	46158807	46159088	(202797334)	+	AluSx3	SINE/Alu	2	283	(28)	89450
20	6.7	0.0	2.9	chr1	46489707	46489740	(202466682)	+	(GCGGG)n	Simple_repeat	1	34	(0)	90134
19	22.7	0.0	0.0	chr1	46522733	46522773	(202433649)	+	(TG)n	Simple_repeat	1	41	(0)	90191
201	32.9	1.4	2.7	chr1	46544914	46544988	(202411434)	C	MIRb	SINE/MIR	(77)	191	118	90225
201	27.7	0.0	0.0	chr1	46545134	46545180	(202411242)	+	L2b	LINE/L2	3291	3337	(38)	90226
348	31.6	6.9	8.2	chr1	47333318	47333668	(201622754)	+	L2a	LINE/L2	2989	3336	(39)	91367
17	8.3	3.9	0.0	chr1	50959622	50959647	(197996775)	+	(CA)n	Simple_repeat	1	27	(0)	97703
2210	24.5	7.7	4.8	chr1	51128725	51128855	(197827567)	C	L1ME2	LINE/L1	(716)	5448	5299	97993
2341	10.8	0.0	0.6	chr1	51128871	51129184	(197827238)	C	AluSx	SINE/Alu	(0)	312	1	97997
662	16.1	16.4	0.8	chr1	51129188	51129305	(197827117)	C	AluJr4	SINE/Alu	(172)	140	1	97998
622	19.9	10.4	0.0	chr1	51129306	51129451	(197826971)	C	L1MD2	LINE/L1	(316)	6043	5881	97999
12	23.2	0.0	4.5	chr1	51878751	51878794	(197077628)	+	(CCCTCCG)n	Simple_repeat	1	44	(0)	99630
257	31.3	8.0	8.0	chr1	51963965	51964467	(196991955)	+	L2-3_Crp	LINE/L2	586	1088	(1008)	99837
17	6.8	9.7	0.0	chr1	53093681	53093711	(195862711)	+	(CT)n	Simple_repeat	1	34	(0)	102439
245	36.0	27.9	4.0	chr1	53093896	53094208	(195862214)	+	L2b	LINE/L2	2934	3321	(66)	102440
335	25.6	13.0	3.5	chr1	53167038	53167277	(195789145)	C	L2c	LINE/L2	(5)	3370	3070	102578
161	24.2	4.5	4.3	chr1	54119771	54120464	(194835958)	+	(CACAAC)n	Simple_repeat	1	725	(0)	104453
366	32.8	10.6	3.8	chr1	54409151	54409467	(194546955)	+	L2c	LINE/L2	3034	3374	(13)	105004
466	30.6	5.8	1.7	chr1	54415452	54415684	(194540738)	C	L2c	LINE/L2	(235)	3152	2910	105018
311	27.8	2.2	0.0	chr1	54463249	54463338	(194493084)	C	MIR3	SINE/MIR	(61)	147	56	105136
203	28.3	2.6	8.9	chr1	54463373	54463496	(194492926)	+	MIR3	SINE/MIR	21	136	(72)	105137
36	20.2	2.5	0.0	chr1	54476197	54476275	(194480147)	+	(CA)n	Simple_repeat	1	81	(0)	105165
21	3.7	3.6	0.0	chr1	54476321	54476348	(194480074)	+	(CA)n	Simple_repeat	1	29	(0)	105165
20	26.2	3.7	2.4	chr1	54476356	54476399	(194480023)	+	(CT)n	Simple_repeat	1	44	(0)	105166
32	5.3	2.5	0.0	chr1	54476400	54476439	(194479983)	+	(CA)n	Simple_repeat	1	41	(0)	105167
20	26.2	3.7	2.4	chr1	54476440	54476476	(194479946)	+	(CT)n	Simple_repeat	1	38	(0)	105168
15	14.4	0.0	0.0	chr1	54476526	54476549	(194479873)	+	(TC)n	Simple_repeat	1	24	(0)	105169
571	29.4	8.0	0.9	chr1	55287216	55287435	(193668987)	C	MIRc	SINE/MIR	(13)	255	19	106793
148	17.2	2.1	4.7	chr1	58799640	58800016	(190156406)	+	(TCCT)n	Simple_repeat	1	385	(0)	113543
278	36.1	1.0	0.0	chr1	58800018	58800114	(190156308)	C	L2b	LINE/L2	(19)	3356	3259	113544
78	6.6	3.6	0.0	chr1	61588982	61589093	(187367329)	+	(TC)n	Simple_repeat	1	116	(0)	118399
18	0.0	4.3	0.0	chr1	65231336	65231358	(183725064)	+	(TG)n	Simple_repeat	1	24	(0)	125377
59	1.8	0.0	0.0	chr1	67695107	67695161	(181261261)	+	(TG)n	Simple_repeat	1	55	(0)	129426
199	29.9	1.5	0.0	chr1	67695165	67695231	(181261191)	C	L2c	LINE/L2	(222)	3165	3098	129427
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
2101	20.8	4.7	4.5	chr1	70675661	70676168	(178280254)	C	LTR53	LTR/ERVL	(7)	512	4	133816
2378	13.0	0.8	0.0	chr1	75690477	75690845	(173265577)	+	MER41E	LTR/ERV1	1	372	(223)	140290
829	16.1	0.0	0.0	chr1	75690846	75690963	(173265459)	+	AluSz	SINE/Alu	1	118	(194)	140292
414	29.1	14.0	4.2	chr1	83918921	83919228	(165037194)	+	MLT1H1	LTR/ERVL-MaLR	187	514	(65)	151813
40	0.0	0.0	0.0	chr1	83919260	83919293	(165037129)	+	(GT)n	Simple_repeat	1	34	(0)	151814
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
698	23.0	8.0	0.5	chr1	85279066	85279262	(163677160)	C	L2a	LINE/L2	(547)	2872	2660	153924
5432	11.6	3.0	3.8	chr1	93728200	93729025	(155227397)	C	LTR1A2	LTR/ERV1	(0)	837	18	166753
412	22.7	0.0	0.0	chr1	93729087	93729160	(155227262)	C	LTR16A	LTR/ERVL	(4)	434	361	166754
180	31.0	1.7	0.0	chr1	100347403	100347460	(148608962)	+	L3	LINE/CR1	4038	4096	(3)	176437
214	33.7	12.7	2.8	chr1	108080471	108080977	(140875445)	+	L2b	LINE/L2	688	1252	(2167)	186325
1608	17.8	4.0	2.4	chr1	108668723	108668915	(140287507)	+	AluJr	SINE/Alu	97	297	(15)	187107
34	34.7	2.0	1.9	chr1	108668919	108669069	(140287353)	+	GA-rich	Low_complexity	1	154	(0)	187109
348	16.4	1.5	1.5	chr1	108669072	108669139	(140287283)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	495	187110
2223	11.2	0.3	0.6	chr1	109100807	109101119	(139855303)	C	AluJb	SINE/Alu	(0)	312	1	187986
1096	15.7	1.2	0.0	chr1	109101130	109101295	(139855127)	C	AluJb	SINE/Alu	(4)	308	141	187987
29	18.2	1.6	0.0	chr1	109484573	109484634	(139471788)	+	(TCCA)n	Simple_repeat	1	63	(0)	188669
1381	29.5	14.8	3.3	chr1	109918041	109919101	(139037321)	C	L2c	LINE/L2	(179)	3208	2013	189278
84	23.6	4.3	4.4	chr1	110722201	110722545	(138233877)	+	(GT)n	Simple_repeat	1	360	(0)	190630
572	15.2	0.0	2.0	chr1	111589703	111589803	(137366619)	C	AluJb	SINE/Alu	(5)	307	209	191759
1381	16.4	0.0	4.4	chr1	111589841	111590069	(137366353)	C	AluJb	SINE/Alu	(93)	219	1	191759
85	0.0	4.5	0.0	chr1	112881243	112881331	(136075091)	+	(TTTC)n	Simple_repeat	1	93	(0)	193973
69	1.9	9.5	0.0	chr1	112881332	112881436	(136074986)	+	(CT)n	Simple_repeat	1	115	(0)	193974
5281	7.4	2.3	0.0	chr1	112903940	112904611	(136051811)	C	LTR8	LTR/ERV1	(3)	688	1	194023
3204	15.8	4.3	7.1	chr1	114367506	114369149	(134587273)	C	Harlequin-int	LTR/ERV1	(3752)	1350	1	196466
2251	11.8	0.0	1.9	chr1	114379670	114379983	(134576439)	+	AluSq2	SINE/Alu	1	308	(5)	196478
1186	17.8	21.8	11.7	chr1	114379984	114380421	(134576001)	+	LTR36	LTR/ERV1	123	611	(0)	196475
1721	15.5	0.0	7.1	chr1	114521768	114522089	(134434333)	C	AluJr	SINE/Alu	(13)	299	1	196754
253	25.5	14.0	3.0	chr1	114522111	114522211	(134434211)	+	MamGypLTR3	LTR/Gypsy	219	332	(649)	196755
454	22.3	6.6	7.5	chr1	114522275	114522530	(134433892)	+	MamGypLTR3	LTR/Gypsy	732	981	(0)	196755
16	25.7	1.8	1.7	chr1	114670043	114670115	(134286307)	+	(CCCCAG)n	Simple_repeat	1	73	(0)	197085
22	0.0	0.0	0.0	chr1	115641538	115641561	(133314861)	+	(TG)n	Simple_repeat	1	24	(0)	198478
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
1093	31.5	10.7	1.9	chr1	116131794	116132668	(132823754)	C	L2b	LINE/L2	(643)	2776	1816	199206
535	30.0	14.3	1.3	chr1	116148812	116149312	(132807110)	+	L2a	LINE/L2	2817	3421	(5)	199223
389	23.0	0.0	0.0	chr1	116415632	116415705	(132540717)	C	MER112	DNA/hAT-Charlie	(187)	74	1	199654
21	42.9	0.0	1.7	chr1	116466898	116467012	(132489410)	+	(TGG)n	Simple_repeat	1	115	(0)	199743
50	2.2	0.0	0.0	chr1	116687595	116687641	(132268781)	+	(GT)n	Simple_repeat	1	47	(0)	200110
12	22.4	0.0	2.6	chr1	116826141	116826178	(132130244)	+	G-rich	Low_complexity	1	38	(0)	200328
536	8.2	14.2	0.5	chr1	121400102	121401446	(127554976)	+	A-rich	Low_complexity	1	1536	(0)	207020
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
18	14.2	0.0	6.5	chr1	145996795	145996840	(102959582)	+	GA-rich	Low_complexity	1	46	(0)	211892
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
2155	10.0	3.2	0.7	chr1	150255202	150255500	(98700922)	C	AluSz6	SINE/Alu	(0)	312	6	218640
12	13.9	11.9	3.0	chr1	152048316	152048374	(96908048)	+	(GGCTGT)n	Simple_repeat	1	66	(0)	222321
4089	9.7	2.2	0.2	chr1	153343705	153344272	(95612150)	+	LTR19B	LTR/ERV1	1	580	(0)	223933
1866	21.9	8.5	0.5	chr1	153433357	153433947	(95522475)	+	MER77B	LTR/ERVL	1	681	(19)	224065
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
38	0.0	0.0	0.0	chr1	156435324	156435356	(92521066)	+	(GT)n	Simple_repeat	1	33	(0)	230123
5033	14.3	2.8	0.6	chr1	157274376	157275504	(91680918)	C	HERVFH21-int	LTR/ERV1	(1727)	4802	3586	231519
2771	12.7	1.4	5.8	chr1	157279384	157279886	(91676536)	C	LTR21A	LTR/ERV1	(0)	481	1	231522
232	28.1	0.0	0.0	chr1	157312426	157312482	(91643940)	+	LTR85c	LTR/Gypsy?	493	549	(274)	231559
271	10.5	0.0	0.0	chr1	160989981	160990018	(87966404)	C	L1MC4a	LINE/L1	(2397)	5485	5448	236635
2426	8.2	0.0	1.0	chr1	160990101	160990406	(87966016)	+	AluSq2	SINE/Alu	1	303	(10)	236639
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
62	0.0	0.0	0.0	chr1	161311399	161311451	(87644971)	+	(TG)n	Simple_repeat	1	53	(0)	237273
19	12.4	0.0	0.0	chr1	161399246	161399280	(87557142)	+	(GCCGGA)n	Simple_repeat	1	35	(0)	237469
31	26.4	1.1	1.1	chr1	161481655	161481696	(87474726)	+	(CT)n	Simple_repeat	1	42	(0)	237609
35	5.3	0.0	0.0	chr1	161481697	161481735	(87474687)	+	(CA)n	Simple_repeat	1	39	(0)	237610
31	26.4	1.1	1.1	chr1	161481736	161481785	(87474637)	+	(CT)n	Simple_repeat	1	50	(0)	237611
138	22.1	2.5	1.9	chr1	162839672	162839896	(86116526)	+	GA-rich	Low_complexity	1	226	(0)	239831
2465	7.4	0.0	0.6	chr1	162839897	162840209	(86116213)	+	AluY	SINE/Alu	1	311	(0)	239832
2588	5.9	0.0	0.0	chr1	165924416	165924722	(83031700)	C	AluSc	SINE/Alu	(2)	307	1	244542
206	20.2	17.6	3.5	chr1	165924942	165925028	(83031394)	C	L2c	LINE/L2	(8)	3379	3278	244543
890	27.8	8.9	4.0	chr1	166489343	166489960	(82466462)	C	L2a	LINE/L2	(1)	3425	2762	245349
699	25.9	0.8	8.2	chr1	166490006	166490287	(82466135)	C	LTR12F	LTR/ERV1	(22)	497	237	245350
746	32.3	13.1	3.3	chr1	166705221	166705697	(82250725)	C	LTR16E1	LTR/ERVL	(12)	526	3	245632
402	28.4	0.9	0.0	chr1	166705698	166705806	(82250616)	C	L2a	LINE/L2	(269)	3157	3048	245633
233	35.5	4.7	2.4	chr1	166705812	166705935	(82250487)	C	L2a	LINE/L2	(544)	2875	2749	245633
302	9.8	6.7	3.5	chr1	167056409	167057078	(81899344)	+	(GT)n	Simple_repeat	1	715	(0)	246072
249	29.7	3.9	1.3	chr1	167057131	167057205	(81899217)	+	MIRc	SINE/MIR	94	170	(98)	246073
26	24.4	1.2	3.5	chr1	167620965	167620992	(81335430)	+	(TC)n	Simple_repeat	1	28	(0)	247002
46	2.3	0.0	0.0	chr1	167620993	167621036	(81335386)	+	(TG)n	Simple_repeat	1	44	(0)	247003
26	24.4	1.2	3.5	chr1	167621037	167621091	(81335331)	+	(TC)n	Simple_repeat	1	53	(0)	247004
1351	25.5	6.4	6.3	chr1	168476395	168477070	(80479352)	C	L2a	LINE/L2	(1)	3425	2740	248462
2039	16.1	0.0	0.3	chr1	173611962	173612266	(75344156)	+	AluJb	SINE/Alu	1	304	(8)	255854
76	4.9	0.0	0.0	chr1	173612278	173612362	(75344060)	+	(AGGA)n	Simple_repeat	1	85	(0)	255855
801	14.3	3.0	3.6	chr1	173612402	173612568	(75343854)	+	L1MB7	LINE/L1	5319	5484	(690)	255852
5630	7.5	1.9	2.6	chr1	173612573	173614262	(75342160)	+	SVA_D	Retroposon/SVA	11	1363	(23)	255856
67	0.0	5.6	0.0	chr1	175030000	175030070	(73926352)	+	(AC)n	Simple_repeat	1	75	(0)	258118
2749	16.5	1.6	2.6	chr1	175030163	175030654	(73925768)	C	MER45B	DNA/hAT-Tip100	(0)	1040	554	258119
1110	27.7	11.1	3.1	chr1	180131593	180132269	(68824153)	C	L2a	LINE/L2	(1281)	2138	1401	265922
2434	6.9	1.9	0.3	chr1	186288619	186288921	(62667501)	+	AluY	SINE/Alu	1	308	(3)	275393
4624	13.3	5.3	1.1	chr1	189149550	189150337	(59806085)	+	LTR1A2	LTR/ERV1	15	837	(0)	279202
8278	9.9	1.6	0.7	chr1	192977227	192978516	(55977906)	+	Charlie3	DNA/hAT-Charlie	1	1348	(1358)	284173
6214	29.0	8.4	3.7	chr1	192985411	192986727	(55969695)	C	L2a	LINE/L2	(1)	3425	2095	284178
2570	11.4	4.4	0.2	chr1	194862048	194862478	(54093944)	C	L1PA13	LINE/L1	(2)	6161	5712	286685
1574	20.4	4.5	0.0	chr1	195720689	195720982	(53235440)	+	AluJb	SINE/Alu	1	308	(4)	287763
882	20.7	1.9	1.2	chr1	195721307	195721489	(53234933)	+	MER57C2	LTR/ERV1	102	272	(139)	287762
4172	19.6	1.9	2.3	chr1	196181086	196181880	(52774542)	+	MER54B	LTR/ERVL	2	793	(0)	288328
738	25.5	8.4	1.8	chr1	198598678	198598953	(50357469)	C	MLT1I	LTR/ERVL-MaLR	(7)	404	109	291433
99	28.6	1.9	0.6	chr1	201611893	201612106	(47344316)	+	(TG)n	Simple_repeat	1	216	(0)	296359
1916	18.1	3.0	3.0	chr1	201612107	201612168	(47344254)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	306	296360
46	21.2	3.1	4.8	chr1	201955119	201955207	(47001215)	+	A-rich	Low_complexity	71	157	(0)	296924
513	28.7	2.9	0.6	chr1	202204190	202205936	(46750486)	+	(CA)n	Simple_repeat	1	1797	(0)	297476
1679	12.8	5.3	2.7	chr1	202927401	202927696	(46028726)	+	AluJb	SINE/Alu	1	304	(8)	298768
187	29.6	11.1	4.3	chr1	203134090	203134181	(45822241)	C	MIR3	SINE/MIR	(24)	184	86	299106
1972	9.2	0.0	0.8	chr1	204507593	204507852	(44448570)	C	AluSx1	SINE/Alu	(2)	310	53	301660
91	2.3	1.1	0.0	chr1	204693045	204693134	(44263288)	+	(AG)n	Simple_repeat	1	91	(0)	302080
876	28.2	18.9	2.5	chr1	206466734	206467377	(42489045)	C	L2a	LINE/L2	(1211)	2208	1420	305137
18	23.3	5.4	4.1	chr1	206501248	206501340	(42455082)	+	(GAGAGAT)n	Simple_repeat	1	98	(0)	305196
41	4.8	0.0	0.0	chr1	206673167	206673210	(42283212)	+	(GT)n	Simple_repeat	1	44	(0)	305496
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
1256	26.9	4.4	5.8	chr1	206997824	206998047	(41958375)	+	L1ME3D	LINE/L1	5421	5650	(592)	306044
1701	18.2	0.3	3.6	chr1	206998048	206998355	(41958067)	C	AluJo	SINE/Alu	(14)	298	1	306053
2166	16.7	1.4	4.7	chr1	207520092	207520538	(41435884)	+	MER54A	LTR/ERVL	3	434	(467)	306770
70	0.0	0.0	0.0	chr1	208022028	208022087	(40934335)	+	(GT)n	Simple_repeat	1	60	(0)	307493
157	21.5	5.7	1.0	chr1	208149145	208149602	(40806820)	+	(TG)n	Simple_repeat	1	484	(0)	307680
12	26.9	2.7	6.6	chr1	208245524	208245597	(40710825)	+	GA-rich	Low_complexity	1	76	(0)	307826
31	31.6	2.6	4.0	chr1	211123453	211123645	(37832777)	+	(GACA)n	Simple_repeat	1	198	(0)	312135
19	0.0	6.7	0.0	chr1	211382660	211382689	(37573733)	+	(CCCCT)n	Simple_repeat	1	32	(0)	312613
539	29.6	8.4	0.0	chr1	211529333	211529518	(37426904)	+	MIRb	SINE/MIR	60	262	(6)	312869
576	34.3	2.8	12.6	chr1	211529846	211530289	(37426133)	+	L2b	LINE/L2	2977	3375	(0)	312870
661	33.9	14.6	2.6	chr1	211682919	211683777	(37272645)	C	L2c	LINE/L2	(547)	2872	1893	313183
8776	6.6	1.2	1.5	chr1	211687892	211689054	(37267368)	+	Harlequin-int	LTR/ERV1	263	1422	(5474)	313200
181	15.2	13.2	6.1	chr1	212152525	212152573	(36803849)	C	L2	LINE/L2	(518)	2901	2849	313999
1355	30.1	10.2	6.3	chr1	212793491	212793998	(36162424)	C	L2c	LINE/L2	(582)	2837	2344	315150
340	29.4	9.7	6.2	chr1	212860542	212860795	(36095627)	+	L2a	LINE/L2	3142	3386	(1)	315334
362	33.8	9.3	3.4	chr1	212860888	212861363	(36095059)	+	L2c	LINE/L2	2656	3161	(214)	315335
569	20.6	11.0	0.7	chr1	213593809	213593870	(35362552)	+	Charlie5	DNA/hAT-Charlie	37	105	(2519)	316483
272	26.6	3.5	9.2	chr1	213904770	213904889	(35051533)	+	L2c	LINE/L2	3274	3386	(1)	316917
74	22.0	2.2	4.3	chr1	213904934	213905159	(35051263)	+	GA-rich	Low_complexity	1	231	(0)	316918
18	17.9	2.3	0.0	chr1	214603356	214603399	(34353023)	+	(GGCGGCG)n	Simple_repeat	1	45	(0)	317968
121	16.3	0.0	0.9	chr1	219941475	219941743	(29014679)	+	(CCTT)n	Simple_repeat	1	266	(0)	325358
3784	8.5	0.2	0.2	chr1	221958165	221958635	(26997787)	+	LTR7C	LTR/ERV1	1	471	(0)	328430
461	33.6	4.2	5.0	chr1	224105178	224105613	(24850809)	C	L2-3_Crp	LINE/L2	(1090)	1006	575	331800
569	26.0	10.7	0.0	chr1	224105614	224105821	(24850601)	+	L2	LINE/L2	1519	1751	(1668)	331801
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
11	7.4	10.3	0.0	chr1	225928519	225928547	(23027875)	+	(CTGCTT)n	Simple_repeat	1	32	(0)	334828
198	34.0	0.0	8.6	chr1	226014683	226014715	(22941707)	+	L2a	LINE/L2	3266	3293	(82)	335016
2151	10.6	1.0	1.9	chr1	226014716	226015027	(22941395)	C	AluSq2	SINE/Alu	(3)	310	2	335017
1954	13.5	0.0	7.5	chr1	226032036	226032369	(22924053)	+	AluSx	SINE/Alu	1	309	(3)	335058
329	38.4	3.6	0.0	chr1	226032406	226032616	(22923806)	C	L2	LINE/L2	(785)	2634	2416	335059
86	18.1	4.2	2.2	chr1	226199989	226200205	(22756217)	+	(TTC)n	Simple_repeat	1	221	(0)	335427
1523	18.4	0.0	0.0	chr1	226200208	226200452	(22755970)	C	AluJo	SINE/Alu	(32)	280	36	335428
296	21.4	5.0	9.1	chr1	226207036	226207150	(22749272)	+	MIRc	SINE/MIR	5	112	(156)	335448
953	15.5	2.4	0.6	chr1	226207159	226207356	(22749066)	+	L1MB8	LINE/L1	5740	5945	(2050)	335449
34	4.9	2.4	0.0	chr1	226785600	226785641	(22170781)	+	(TG)n	Simple_repeat	1	43	(0)	336470
347	27.4	5.4	1.9	chr1	227351338	227351445	(21604977)	C	MIRb	SINE/MIR	(62)	206	95	337363
52	34.3	1.7	1.3	chr1	227559169	227559403	(21397019)	+	(CT)n	Simple_repeat	1	239	(0)	337638
19	13.6	0.0	4.5	chr1	227559373	227559416	(21397006)	+	(TGTCTG)n	Simple_repeat	1	44	(0)	337639
14	25.0	2.1	0.0	chr1	227560016	227560062	(21396360)	+	(CTCTCT)n	Simple_repeat	1	48	(0)	337641
30	10.3	1.9	0.0	chr1	227560096	227560147	(21396275)	+	(TC)n	Simple_repeat	1	53	(0)	337642
39	34.1	1.1	1.7	chr1	227560177	227560355	(21396067)	+	(CTCTTT)n	Simple_repeat	1	181	(0)	337643
77	25.5	1.4	0.5	chr1	227899566	227899776	(21056646)	+	(CTCTCT)n	Simple_repeat	1	214	(0)	338030
43	0.0	0.0	0.0	chr1	227919687	227919723	(21036699)	+	(AC)n	Simple_repeat	1	37	(0)	338055
41	21.4	5.9	2.1	chr1	227919746	227919880	(21036542)	+	(AC)n	Simple_repeat	1	143	(0)	338055
417	27.6	7.3	0.8	chr1	228446836	228446963	(20509459)	C	L2a	LINE/L2	(9)	3417	3281	338726
1702	16.4	0.3	8.8	chr1	228447202	228447399	(20509023)	C	L1M3	LINE/L1	(705)	5607	5410	338727
63	31.5	1.7	0.8	chr1	228622248	228622488	(20333934)	+	GA-rich	Low_complexity	1	245	(0)	338916
18	24.5	0.0	0.0	chr1	228646795	228646837	(20309585)	+	(CA)n	Simple_repeat	1	43	(0)	338981
21	11.2	0.0	0.0	chr1	229559386	229559415	(19397007)	+	(T)n	Simple_repeat	1	30	(0)	340497
1886	8.9	0.4	0.0	chr1	229559420	229559656	(19396766)	C	AluSx	SINE/Alu	(74)	238	1	340498
127	21.2	1.0	2.5	chr1	231202005	231202317	(17754105)	+	GA-rich	Low_complexity	1	316	(0)	343099
318	27.7	4.7	1.6	chr1	231202318	231202464	(17753958)	C	L2a	LINE/L2	(310)	3116	2961	343098
1533	26.0	7.4	3.2	chr1	233635662	233636668	(15319754)	C	L2a	LINE/L2	(0)	3426	2378	346694
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
29	30.8	2.7	0.9	chr1	233722772	233722882	(15233540)	+	(TTTC)n	Simple_repeat	1	114	(0)	346819
2745	16.1	6.9	0.2	chr1	233722911	233723400	(15233022)	C	LTR45	LTR/ERV1	(0)	525	1	346820
60	6.2	5.7	1.8	chr1	234495839	234495848	(14460574)	+	(CTTTC)n	Simple_repeat	1	111	(0)	347961
31	21.4	1.1	5.2	chr1	234495849	234495943	(14460479)	+	(TTTCTT)n	Simple_repeat	1	96	(0)	347962
2348	13.0	0.0	1.3	chr1	234495946	234496295	(14460127)	C	AluSx1	SINE/Alu	(0)	312	1	347963
55	0.0	0.0	0.0	chr1	234545000	234545046	(14411376)	+	(GT)n	Simple_repeat	1	47	(0)	348059
34	26.1	1.6	1.4	chr1	234546919	234547040	(14409382)	+	GA-rich	Low_complexity	1	122	(0)	348062
346	30.9	11.7	5.5	chr1	234547192	234547390	(14409032)	+	MIRb	SINE/MIR	25	237	(25)	348063
93	18.4	4.7	3.8	chr1	234680436	234680713	(14275709)	+	A-rich	Low_complexity	1	291	(0)	348273
959	24.9	8.4	10.8	chr1	234680761	234681442	(14274980)	C	L2a	LINE/L2	(216)	3210	2540	348271
2098	27.4	8.7	4.4	chr1	234681446	234682399	(14274023)	C	L2a	LINE/L2	(2349)	1070	72	348271
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
2060	14.2	1.0	0.0	chr1	234865972	234866281	(14090141)	C	AluSq	SINE/Alu	(0)	313	1	348567
2036	23.4	5.5	3.5	chr1	234866282	234866450	(14089972)	C	MLT1F	LTR/ERVL-MaLR	(382)	166	1	348566
242	33.3	0.0	0.0	chr1	234975375	234975449	(13980973)	+	LFSINE_Vert	SINE/tRNA	2	76	(383)	348765
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
27	22.0	4.6	4.4	chr1	235098417	235098524	(13857898)	+	GA-rich	Low_complexity	1	113	(0)	349026
4874	6.0	6.8	9.6	chr1	236349320	236349832	(12606590)	C	MER4E	LTR/ERV1	(0)	766	276	351439
2138	11.9	2.3	0.0	chr1	236349833	236350127	(12606295)	+	AluSx	SINE/Alu	4	305	(7)	351440
4051	11.5	0.8	2.0	chr1	236351728	236352219	(12604203)	C	MER41E	LTR/ERV1	(99)	496	1	351444
1369	13.1	3.3	3.7	chr1	236352220	236352422	(12604000)	C	LTR54	LTR/ERV1	(306)	204	1	351441
1827	17.0	0.0	3.5	chr1	236352423	236352565	(12603857)	+	AluJr	SINE/Alu	1	141	(171)	351446
4382	12.6	0.0	0.3	chr1	241696323	241696958	(7259464)	C	MER41B	LTR/ERV1	(0)	634	1	359670
288	29.7	10.2	5.4	chr1	241698525	241698766	(7257656)	+	L2c	LINE/L2	2911	3165	(222)	359672
2014	10.6	0.0	0.0	chr1	241735534	241735788	(7220634)	C	AluSz	SINE/Alu	(11)	301	47	359748
42	21.2	0.0	2.9	chr1	241735789	241735855	(7220567)	+	(CT)n	Simple_repeat	2	67	(0)	359749
41	0.0	0.0	0.0	chr1	241735856	241735890	(7220532)	+	(TG)n	Simple_repeat	1	35	(0)	359750
42	21.2	0.0	2.9	chr1	241735891	241735904	(7220518)	+	(CT)n	Simple_repeat	2	14	(0)	359751
437	24.6	4.2	3.3	chr1	244346249	244346393	(4610029)	+	FLAM_C	SINE/Alu	42	283	(19)	364023
30	0.0	0.0	0.0	chr1	244346394	244346422	(4610000)	+	(AAAAC)n	Simple_repeat	1	29	(0)	364024
55	0.0	0.0	0.0	chr1	244346453	244346499	(4609923)	+	(AC)n	Simple_repeat	1	47	(0)	364025
267	28.3	0.0	1.1	chr1	244346558	244346650	(4609772)	C	MLT1L	LTR/ERVL-MaLR	(518)	92	1	364026
830	31.6	17.1	5.2	chr1	244636948	244639404	(4317018)	+	L2c	LINE/L2	360	3196	(191)	364484
41	0.0	0.0	0.0	chr1	245169329	245169363	(3787059)	+	(GT)n	Simple_repeat	1	35	(0)	365588
17	25.1	6.7	0.0	chr10	3785252	3785326	(130012096)	+	(CCCGCC)n	Simple_repeat	1	80	(0)	375557
246	23.6	1.2	0.3	chr10	3802462	3803048	(129994374)	+	(AC)n	Simple_repeat	1	594	(0)	375580
758	23.0	3.5	1.0	chr10	4849563	4849760	(128947662)	+	L1MA6	LINE/L1	5943	6145	(155)	377001
1475	26.2	9.0	0.7	chr10	4867250	4867706	(128929716)	C	L1MD2	LINE/L1	(139)	6220	5722	377029
1148	16.4	0.9	1.8	chr10	5568845	5568992	(128228430)	C	Tigger17a	DNA/TcMar-Tigger	(68)	586	440	377934
155	19.3	4.6	0.0	chr10	5569005	5569375	(128228047)	+	(GTTG)n	Simple_repeat	1	388	(0)	377936
252	24.4	0.0	4.4	chr10	13306241	13306330	(120491092)	C	PRIMA4-int	LTR/ERV1	(7687)	583	498	390513
257	26.4	7.0	9.4	chr10	15091263	15091379	(118706043)	C	MER5B	DNA/hAT-Charlie	(6)	172	59	393606
19	28.5	2.5	2.5	chr10	15091611	15091689	(118705733)	+	(TTTC)n	Simple_repeat	1	81	(0)	393607
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
48	0.0	0.0	0.0	chr10	15434587	15434627	(118362795)	+	(CA)n	Simple_repeat	1	41	(0)	394254
1864	17.2	1.3	0.3	chr10	17425287	17425582	(116371840)	+	AluSx	SINE/Alu	2	300	(12)	397357
89	12.5	2.2	4.2	chr10	17425586	17425770	(116371652)	+	GA-rich	Low_complexity	1	189	(0)	397358
994	26.2	7.6	4.9	chr10	17425771	17425838	(116371584)	C	LTR16C	LTR/ERVL	(48)	441	374	397356
2706	18.6	2.5	0.2	chr10	17425839	17426344	(116371078)	+	LTR53	LTR/ERVL	2	519	(0)	397359
470	34.3	4.3	7.8	chr10	18699325	18699732	(115097690)	C	L2b	LINE/L2	(16)	3359	2967	399515
230	33.8	0.0	2.4	chr10	24902341	24902422	(108895000)	+	MamSINE1	SINE/tRNA-RTE	78	157	(133)	409362
2078	16.1	0.3	1.0	chr10	24944503	24944807	(108852615)	+	AluJr	SINE/Alu	2	304	(8)	409440
873	29.7	11.8	3.9	chr10	24944808	24945301	(108852121)	+	L2b	LINE/L2	2820	3375	(0)	409439
249	27.8	7.6	3.6	chr10	28494493	28494630	(105302792)	+	L2c	LINE/L2	3241	3384	(3)	415236
4627	12.4	4.5	5.3	chr10	29142531	29143374	(104654048)	+	LTR1A2	LTR/ERV1	1	837	(0)	416380
771	24.8	0.0	5.9	chr10	30437331	30437549	(103359873)	C	MIR	SINE/MIR	(26)	236	31	418709
264	18.8	0.0	0.2	chr10	35412984	35413034	(98384388)	+	L2a	LINE/L2	3284	3384	(42)	426554
246	28.7	0.1	0.4	chr10	43087868	43088543	(90708879)	+	(GTGGTG)n	Simple_repeat	1	677	(0)	432938
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
1271	19.7	9.7	0.0	chr10	43424418	43424707	(90372715)	+	Tigger6b	DNA/TcMar-Tigger	1	321	(1276)	433477
1212	14.8	3.4	4.8	chr10	43424719	43424771	(90372651)	+	Tigger6a	DNA/TcMar-Tigger	802	844	(239)	433478
2280	13.1	0.0	0.6	chr10	43424772	43425085	(90372337)	C	AluSx1	SINE/Alu	(0)	312	1	433479
135	17.9	3.4	0.3	chr10	45416683	45416975	(88380447)	+	(GATG)n	Simple_repeat	1	303	(0)	436032
24	27.6	5.6	1.8	chr10	46106989	46107149	(87690273)	+	(TC)n	Simple_repeat	1	167	(0)	437211
57	24.9	0.6	3.4	chr10	46218020	46218193	(87579229)	+	(TGTG)n	Simple_repeat	1	175	(0)	437366
589	32.1	10.1	6.1	chr10	46219213	46219620	(87577802)	C	L1MEd	LINE/L1	(6139)	947	522	437367
456	19.5	3.7	3.3	chr10	46525398	46526683	(87270739)	+	(CA)n	Simple_repeat	1	1334	(0)	437801
208	25.9	6.3	1.1	chr10	46526684	46526773	(87270649)	+	L2c	LINE/L2	2984	3078	(309)	437802
298	24.8	1.8	8.4	chr10	46526819	46526937	(87270485)	C	MER5B	DNA/hAT-Charlie	(67)	111	1	437803
351	27.6	10.7	6.0	chr10	46530800	46530864	(87266558)	C	L1MC4	LINE/L1	(5863)	352	288	437808
26	0.0	5.4	2.6	chr10	46530873	46530909	(87266513)	+	(TTTGT)n	Simple_repeat	1	39	(0)	437810
1570	13.9	0.0	0.0	chr10	46530910	46531145	(87266277)	C	AluSx	SINE/Alu	(28)	284	49	437811
351	27.6	10.7	6.0	chr10	46531146	46531345	(87266077)	C	L1MC4	LINE/L1	(5928)	287	73	437808
92	16.7	3.7	0.0	chr10	46535268	46535455	(87261967)	+	(TC)n	Simple_repeat	1	195	(0)	437820
23	3.7	0.0	0.0	chr10	47296010	47296037	(86501385)	+	(CT)n	Simple_repeat	1	28	(0)	438997
52	2.1	0.0	0.0	chr10	47296038	47296086	(86501336)	+	(CA)n	Simple_repeat	1	49	(0)	438998
271	14.9	7.2	3.4	chr10	47894344	47895118	(85902304)	+	(CA)n	Simple_repeat	1	831	(0)	439771
1139	28.4	11.4	2.8	chr10	48471460	48471926	(85325496)	+	L2a	LINE/L2	2376	2889	(530)	440582
102	20.1	0.9	0.5	chr10	49212695	49212899	(84584523)	+	GA-rich	Low_complexity	9	213	(0)	441603
2018	14.4	0.0	0.3	chr10	50734411	50734728	(83062694)	C	AluSz	SINE/Alu	(0)	312	1	443805
2284	29.9	12.8	7.1	chr10	58185931	58186479	(75610943)	C	L2a	LINE/L2	(1159)	2260	1704	453766
1746	18.1	0.3	2.0	chr10	58186480	58186771	(75610651)	C	AluJb	SINE/Alu	(25)	287	1	453775
16	0.0	0.0	4.8	chr10	58512570	58512590	(75284832)	+	(GT)n	Simple_repeat	1	21	(0)	454283
9690	6.8	2.4	10.2	chr10	59732008	59732977	(74064445)	C	Harlequin-int	LTR/ERV1	(5474)	1422	464	456005
41	2.6	0.0	0.0	chr10	59732978	59733017	(74064405)	+	(CA)n	Simple_repeat	1	40	(0)	456006
9690	6.8	2.4	10.2	chr10	59733018	59733592	(74063830)	C	Harlequin-int	LTR/ERV1	(6433)	463	2	456005
373	31.4	2.2	2.2	chr10	60852235	60852371	(72945051)	C	LTR88b	LTR/Gypsy?	(154)	683	547	457722
583	35.3	6.8	3.3	chr10	63641957	63642131	(70155291)	C	LTR81C	LTR/Gypsy	(646)	507	316	462151
115	3.5	0.0	0.0	chr10	63642132	63642249	(70155173)	+	(TTCC)n	Simple_repeat	1	118	(0)	462152
2325	7.5	1.0	1.4	chr10	63642250	63642543	(70154879)	C	AluSp	SINE/Alu	(20)	293	1	462153
2248	9.7	0.0	0.0	chr10	69235141	69235419	(64562003)	+	AluSx1	SINE/Alu	2	280	(32)	471161
35	2.0	7.8	0.0	chr10	69235422	69235472	(64561950)	+	(AAAC)n	Simple_repeat	1	55	(0)	471162
265	36.3	2.1	0.0	chr10	69674699	69674789	(64122633)	+	MIR3	SINE/MIR	31	123	(85)	472042
72	29.4	1.6	1.5	chr10	69674810	69675064	(64122358)	+	(TGG)n	Simple_repeat	1	259	(0)	472043
900	26.0	2.4	5.4	chr10	69881714	69881968	(63915454)	C	MIR	SINE/MIR	(1)	261	10	472436
328	28.5	0.7	0.5	chr10	70960248	70961190	(62836232)	+	(GT)n	Simple_repeat	1	950	(0)	474411
4960	8.8	1.7	1.9	chr10	71920666	71921357	(61876065)	C	LTR8	LTR/ERV1	(0)	691	1	476197
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
1832	13.7	1.4	2.1	chr10	73635386	73635669	(60161753)	C	AluJb	SINE/Alu	(16)	296	15	479693
18	15.3	5.3	0.0	chr10	73635788	73635825	(60161597)	+	(CT)n	Simple_repeat	1	40	(0)	479694
19	18.9	2.4	0.0	chr10	73991945	73991991	(59805431)	+	G-rich	Low_complexity	1	48	(0)	480343
43	6.3	0.0	0.0	chr10	73992121	73992170	(59805252)	+	(GT)n	Simple_repeat	1	50	(0)	480344
2588	17.3	1.4	3.4	chr10	74051772	74052267	(59745155)	C	MER66B	LTR/ERV1	(0)	486	1	480481
2070	13.6	0.3	0.7	chr10	74052375	74052676	(59744746)	C	AluSx3	SINE/Alu	(10)	301	1	480482
495	18.3	5.4	3.7	chr10	77470983	77472174	(56325248)	+	(AC)n	Simple_repeat	1	1230	(0)	485983
29	6.5	4.0	1.9	chr10	77472175	77472224	(56325198)	+	(CA)n	Simple_repeat	1	52	(0)	485984
495	18.3	5.4	3.7	chr10	77472225	77472523	(56324899)	+	(AC)n	Simple_repeat	1	283	(0)	485985
303	24.6	11.3	6.5	chr10	79318820	79318994	(54478428)	+	L2	LINE/L2	1925	2122	(1297)	489414
1750	19.5	13.6	1.9	chr10	79318995	79319371	(54478051)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	489415
1752	21.2	4.6	3.5	chr10	79333665	79334142	(54463280)	C	L1ME2	LINE/L1	(499)	5663	5169	489434
39	14.4	0.0	1.4	chr10	79334143	79334214	(54463208)	+	(CTTC)n	Simple_repeat	1	72	(0)	489439
1385	18.4	1.5	5.0	chr10	79334221	79334498	(54462924)	C	AluJr4	SINE/Alu	(44)	268	1	489440
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
1210	20.2	0.4	3.3	chr10	80545074	80545318	(53252104)	C	L1MB5	LINE/L1	(0)	6174	5937	491377
63	22.9	1.1	4.3	chr10	80545326	80545507	(53251915)	+	(TTC)n	Simple_repeat	1	184	(0)	491378
228	32.8	10.6	0.5	chr10	80545508	80545694	(53251728)	+	L2a	LINE/L2	3184	3391	(35)	491379
387	27.1	7.0	1.5	chr10	80772072	80772206	(53025216)	C	MIRc	SINE/MIR	(24)	244	102	491743
264	21.0	2.4	3.7	chr10	84177927	84178670	(49618752)	+	(CA)n	Simple_repeat	1	762	(0)	496437
193	33.8	2.4	2.4	chr10	91607909	91607990	(42189432)	+	L2c	LINE/L2	2672	2753	(666)	507573
239	29.3	1.2	1.0	chr10	95532128	95532233	(38265189)	+	MIRb	SINE/MIR	51	156	(112)	514437
1249	27.5	8.8	4.7	chr10	96614827	96615609	(37181813)	C	L2a	LINE/L2	(46)	3380	2555	516278
19	23.8	0.0	0.0	chr10	97318957	97319005	(36478417)	+	(GTGT)n	Simple_repeat	1	49	(0)	517718
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
34	0.0	0.0	0.0	chr10	101830682	101830710	(31966712)	+	(CA)n	Simple_repeat	1	29	(0)	525757
12	10.8	6.7	0.0	chr10	101830872	101830901	(31966521)	+	(GCACAT)n	Simple_repeat	1	32	(0)	525758
768	27.2	10.1	3.7	chr10	110426299	110426706	(23370716)	+	HAL1	LINE/L1	2071	2507	(0)	539485
4797	21.9	8.6	4.6	chr10	110664781	110664886	(23132536)	+	L1MC5a	LINE/L1	1691	1825	(952)	539951
1726	17.0	0.7	0.7	chr10	110664887	110665174	(23132248)	C	AluJr	SINE/Alu	(24)	288	1	539954
4797	23.1	9.2	4.8	chr10	110665175	110665631	(23131791)	+	L1MC5a	LINE/L1	1826	2050	(727)	539951
13	25.8	0.0	0.0	chr10	123137598	123137634	(10659788)	+	(CGG)n	Simple_repeat	1	37	(0)	559854
261	22.7	3.1	0.7	chr10	132392087	132392753	(1404669)	+	(GTGATG)n	Simple_repeat	1	688	(0)	571602
5146	12.2	4.7	2.4	chr10	132967129	132967946	(829476)	C	LTR1A2	LTR/ERV1	(0)	837	1	572090
685	24.9	2.1	13.2	chr10	132967947	132968108	(829314)	C	L1MEf	LINE/L1	(2906)	3240	3077	572087
4421	9.9	2.8	0.7	chr11	329237	329833	(134756789)	+	LTR71B	LTR/ERV1	1	610	(0)	573257
1791	13.3	3.0	3.0	chr11	349106	349504	(134737118)	C	MER41-int	LTR/ERV1	(3974)	3842	3468	573310
393	6.1	6.8	0.0	chr11	349505	350170	(134736452)	+	(AC)n	Simple_repeat	1	711	(0)	573311
605	21.6	4.3	1.0	chr11	356451	358039	(134728583)	+	(CA)n	Simple_repeat	1	1658	(0)	573321
1388	26.7	13.2	6.9	chr11	358056	358892	(134727730)	+	L1MC3	LINE/L1	6889	7785	(0)	573322
37	27.3	2.1	7.7	chr11	407173	407415	(134679207)	+	G-rich	Low_complexity	1	248	(0)	573356
13	9.9	2.6	7.7	chr11	842875	842912	(134243710)	+	(GCG)n	Simple_repeat	1	39	(0)	574013
218	17.6	2.7	3.9	chr11	1844916	1845472	(133241150)	+	(GAGACA)n	Simple_repeat	1	572	(0)	575167
386	33.8	0.5	0.7	chr11	2428421	2429753	(132656869)	+	(GTG)n	Simple_repeat	1	1339	(0)	575789
270	29.3	9.2	1.0	chr11	2930009	2930108	(132156514)	+	MIRc	SINE/MIR	55	163	(105)	576323
358	37.5	3.3	3.3	chr11	3169332	3169571	(131917051)	C	MIRb	SINE/MIR	(14)	254	15	576663
13	24.2	2.3	0.0	chr11	3642034	3642077	(131444545)	+	(CCCGCCC)n	Simple_repeat	1	45	(0)	577375
1918	14.5	1.7	5.8	chr11	6554997	6555199	(128531423)	+	MER54B	LTR/ERVL	118	306	(487)	581506
34	9.0	0.0	0.0	chr11	6555200	6555246	(128531376)	+	(CT)n	Simple_repeat	1	47	(0)	581507
1918	14.5	1.7	5.8	chr11	6555247	6555401	(128531221)	+	MER54B	LTR/ERVL	307	461	(332)	581506
2407	6.2	2.7	0.0	chr11	8687631	8687919	(126398703)	C	AluY	SINE/Alu	(14)	297	1	584344
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
21	22.6	10.3	0.0	chr11	10913569	10913665	(124172957)	+	(CTCTT)n	Simple_repeat	1	107	(0)	588364
72	1.5	0.0	0.0	chr11	10913840	10913905	(124172717)	+	(TG)n	Simple_repeat	1	66	(0)	588365
11	14.8	4.9	4.7	chr11	13277392	13277432	(121809190)	+	G-rich	Low_complexity	1	43	(0)	592124
13	33.7	1.4	1.4	chr11	13277699	13277770	(121808852)	+	G-rich	Low_complexity	1	73	(0)	592125
1040	26.9	4.5	0.9	chr11	13740836	13741158	(121345464)	+	LTR33	LTR/ERVL	1	335	(180)	592756
63	6.8	0.0	0.0	chr11	27472969	27473046	(107613576)	+	(GGT)n	Simple_repeat	1	78	(0)	613999
288	25.0	7.5	4.9	chr11	34603454	34603596	(100483026)	C	MER5B	DNA/hAT-Charlie	(6)	172	26	625569
281	21.6	4.5	2.4	chr11	47383259	47383352	(87703270)	C	MIR3	SINE/MIR	(139)	129	35	645786
16	24.8	6.8	3.6	chr11	47383369	47383471	(87703151)	+	G-rich	Low_complexity	1	110	(0)	645787
4278	14.0	3.0	0.9	chr11	59545239	59545914	(75540708)	C	LTR8	LTR/ERV1	(0)	691	1	656933
2334	11.2	0.0	0.6	chr11	59547464	59547777	(75538845)	+	AluSx	SINE/Alu	1	312	(0)	656939
4754	8.6	0.3	2.8	chr11	59547778	59548302	(75538320)	C	MER41B	LTR/ERV1	(124)	510	1	656938
15	18.3	0.0	2.6	chr11	59706870	59706908	(75379714)	+	A-rich	Low_complexity	1	39	(0)	657271
3242	8.6	0.2	0.0	chr11	59706910	59707327	(75379295)	+	LTR3	LTR/ERVK	5	423	(9)	657272
449	20.0	5.0	0.0	chr11	61162162	61162256	(73924366)	+	MER57-int	LTR/ERV1	7437	7536	(1)	659605
877	11.9	15.8	0.0	chr11	61162263	61162422	(73924200)	+	MER57B2	LTR/ERV1	11	200	(203)	659605
2099	17.3	7.1	1.2	chr11	61162462	61162883	(73923739)	C	LTR45B	LTR/ERV1	(40)	449	1	659606
237	30.2	3.0	0.2	chr11	61342264	61342338	(73744284)	+	L2c	LINE/L2	3228	3334	(53)	659962
2410	7.9	0.3	0.0	chr11	61920646	61920949	(73165673)	+	AluSp	SINE/Alu	5	309	(4)	661074
321	16.9	0.0	1.5	chr11	61944098	61944163	(73142459)	+	L1M4	LINE/L1	5153	5217	(929)	661135
84	2.2	0.0	4.0	chr11	61944177	61944277	(73142345)	+	(TCCT)n	Simple_repeat	1	101	(0)	661136
822	18.7	0.0	5.2	chr11	61944280	61944434	(73142188)	C	FRAM	SINE/Alu	(28)	148	2	661137
285	18.8	8.0	0.0	chr11	61944437	61944505	(73142117)	C	MER5A1	DNA/hAT-Charlie	(91)	75	1	661138
2267	10.2	0.3	0.3	chr11	62041758	62042052	(73044570)	C	AluSx1	SINE/Alu	(17)	295	1	661345
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
625	29.9	13.6	2.1	chr11	62889212	62889536	(72197086)	C	L2a	LINE/L2	(2)	3424	3057	663048
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
2265	7.4	1.0	0.0	chr11	63812212	63812508	(71274114)	+	AluSc	SINE/Alu	1	300	(9)	664463
331	34.7	3.4	3.4	chr11	64225936	64226114	(70860508)	C	MIR3	SINE/MIR	(1)	207	29	665220
11	23.1	3.2	6.2	chr11	64285814	64285831	(70800791)	+	(CGGAGC)n	Simple_repeat	1	63	(0)	665323
12	18.1	0.0	7.0	chr11	64285832	64285874	(70800748)	+	G-rich	Low_complexity	1	43	(0)	665324
2078	15.5	0.0	0.3	chr11	64331256	64331559	(70755063)	C	AluJo	SINE/Alu	(9)	303	1	665404
30	8.2	0.0	0.0	chr11	64331620	64331658	(70754964)	+	(GT)n	Simple_repeat	1	39	(0)	665405
24	32.9	0.0	1.2	chr11	64331663	64331747	(70754875)	+	(TG)n	Simple_repeat	1	85	(0)	665406
255	26.3	19.1	0.0	chr11	64331763	64331952	(70754670)	C	L2	LINE/L2	(348)	3071	2837	665407
450	30.8	13.7	5.0	chr11	65428988	65429477	(69657145)	C	L1ME4a	LINE/L1	(251)	5873	5367	667515
40	2.4	2.4	0.0	chr11	65429478	65429519	(69657103)	+	(TG)n	Simple_repeat	1	43	(0)	667516
450	30.8	13.7	5.0	chr11	65429520	65429591	(69657031)	C	L1ME4a	LINE/L1	(758)	5366	5254	667515
505	31.0	12.1	3.3	chr11	65429593	65429862	(69656760)	C	L1ME4a	LINE/L1	(891)	5255	4959	667515
48	0.0	0.0	0.0	chr11	65472426	65472466	(69614156)	+	(GT)n	Simple_repeat	1	41	(0)	667604
2437	8.1	0.0	0.3	chr11	65472556	65472853	(69613769)	+	AluSq2	SINE/Alu	1	297	(16)	667605
2317	9.0	0.7	0.3	chr11	65494195	65494493	(69592129)	C	AluSc	SINE/Alu	(8)	301	2	667656
332	31.3	6.2	8.0	chr11	65499662	65499925	(69586697)	+	L1M4c	LINE/L1	949	1207	(5177)	667663
13	8.5	4.0	0.0	chr11	65500555	65500579	(69586043)	+	(GAAG)n	Simple_repeat	1	26	(0)	667664
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
247	10.8	6.5	0.6	chr11	65516229	65516702	(69569920)	+	GA-rich	Low_complexity	1	505	(0)	667692
304	31.1	15.2	3.9	chr11	66549075	66549435	(68537187)	+	L2c	LINE/L2	2913	3321	(66)	669764
9575	6.2	16.2	0.2	chr11	67475910	67477234	(67609388)	+	LTR12C	LTR/ERV1	3	1579	(0)	671715
528	23.7	0.7	1.4	chr11	67477411	67477551	(67609071)	C	LTR5_Hs	LTR/ERVK	(135)	833	694	671716
5047	2.6	0.2	0.1	chr11	67477431	67478073	(67608549)	C	SVA_D	Retroposon/SVA	(0)	1386	449	671717
226	30.3	0.0	0.0	chr11	67507869	67507934	(67578688)	C	MIRc	SINE/MIR	(120)	148	83	671763
112	22.6	2.5	0.0	chr11	69300750	69301024	(65785598)	+	(TGGA)n	Simple_repeat	1	282	(0)	674864
148	26.9	0.9	1.4	chr11	69575266	69575692	(65510930)	+	(CT)n	Simple_repeat	1	431	(0)	675312
79	2.6	0.0	0.0	chr11	70196357	70196435	(64890187)	+	(TGTTG)n	Simple_repeat	1	79	(0)	676412
2312	8.1	0.0	0.0	chr11	70196436	70196720	(64889902)	C	AluSx4	SINE/Alu	(25)	285	1	676413
74	26.3	1.0	0.5	chr11	71556124	71556320	(63530302)	+	(TG)n	Simple_repeat	1	199	(0)	678436
385	34.1	6.7	0.0	chr11	71556321	71556528	(63530094)	C	L1MA7	LINE/L1	(136)	6155	5933	678437
2071	11.7	3.9	0.0	chr11	73982305	73982603	(61104019)	+	AluSx1	SINE/Alu	1	311	(1)	683164
239	30.8	13.1	0.8	chr11	75031344	75031611	(60055011)	+	L2	LINE/L2	2704	3009	(410)	685219
27394	7.2	1.8	1.3	chr11	75040758	75044423	(60042199)	+	Harlequin-int	LTR/ERV1	263	3949	(2947)	685240
27	15.2	0.0	0.0	chr11	75351828	75351872	(59734750)	+	(GT)n	Simple_repeat	1	45	(0)	685855
28	5.6	12.5	0.0	chr11	75351972	75351979	(59734643)	+	(GT)n	Simple_repeat	1	30	(33)	685856
21	0.0	2.4	9.3	chr11	75351980	75352021	(59734601)	+	(GTG)n	Simple_repeat	1	43	(0)	685857
28	5.6	12.5	0.0	chr11	75352022	75352027	(59734595)	+	(GT)n	Simple_repeat	31	63	(0)	685856
1157	19.4	6.7	1.7	chr11	75534516	75534879	(59551743)	+	MER54B	LTR/ERVL	30	425	(476)	686278
269	32.5	0.2	0.7	chr11	77192727	77193604	(57893018)	+	(TGG)n	Simple_repeat	1	880	(0)	689418
434	24.3	0.9	0.9	chr11	77193611	77193718	(57892904)	C	MamRep38	DNA/hAT	(8)	287	180	689419
4888	12.7	5.6	1.7	chr11	78605423	78606226	(56480396)	+	LTR1A2	LTR/ERV1	1	837	(0)	692346
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
27	11.0	0.0	0.0	chr11	88174614	88174652	(46911970)	+	(A)n	Simple_repeat	1	39	(0)	708173
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
340	30.3	11.9	2.2	chr11	94515340	94515521	(40571101)	C	L3	LINE/CR1	(1184)	2915	2714	717262
66	12.0	4.5	6.0	chr11	94515522	94515697	(40570925)	+	(CCTTT)n	Simple_repeat	1	184	(0)	717263
360	37.3	11.2	0.0	chr11	94515751	94516034	(40570588)	C	L3	LINE/CR1	(1371)	2728	2409	717262
216	38.4	7.0	0.0	chr11	95153386	95153518	(39933104)	C	MIRc	SINE/MIR	(61)	207	65	718205
538	29.6	8.5	0.9	chr11	95153531	95153758	(39932864)	C	MIRb	SINE/MIR	(20)	248	2	718206
1629	28.9	5.4	0.8	chr11	95734076	95734566	(39352056)	C	LTR33A_	LTR/ERVL	(0)	531	17	719074
1920	15.8	3.5	17.0	chr11	96506969	96506999	(38579623)	+	LTR46	LTR/ERV1	1	34	(426)	720203
26	0.0	0.0	0.0	chr11	96507000	96507024	(38579598)	+	(C)n	Simple_repeat	1	25	(0)	720204
1920	15.8	3.5	17.0	chr11	96507025	96507527	(38579095)	+	LTR46	LTR/ERV1	35	459	(1)	720203
3170	9.2	1.8	2.5	chr11	102384957	102385453	(32701169)	C	LTR15	LTR/ERV1	(0)	559	1	727853
1595	8.6	4.3	0.0	chr11	102385454	102385699	(32700923)	C	LTR1A2	LTR/ERV1	(593)	244	1	727854
658	27.7	7.0	9.0	chr11	116807562	116807725	(18278897)	+	L1MEd	LINE/L1	2416	2602	(3544)	749967
55	23.8	5.1	4.0	chr11	117875103	117875337	(17211285)	+	(TG)n	Simple_repeat	1	247	(0)	751890
250	13.7	0.0	3.8	chr11	117914200	117914252	(17172370)	C	MER4-int	LTR/ERV1	(5437)	1161	1111	751958
42	28.0	0.0	0.0	chr11	117914253	117914381	(17172241)	+	(ACACAC)n	Simple_repeat	1	129	(0)	751959
18	29.9	0.0	0.0	chr11	117986112	117986158	(17100464)	+	(CA)n	Simple_repeat	1	47	(0)	752104
247	33.0	5.9	13.2	chr11	118052720	118053024	(17033598)	+	L2b	LINE/L2	3035	3325	(50)	752220
2064	10.5	0.0	0.7	chr11	118053025	118053301	(17033321)	+	AluSx1	SINE/Alu	2	276	(36)	752221
470	33.6	13.0	2.9	chr11	124667872	124668501	(10418121)	+	L2b	LINE/L2	2650	3373	(2)	763387
2461	18.9	3.0	0.2	chr11	125551738	125552166	(9534456)	+	LTR8	LTR/ERV1	1	441	(250)	764725
6271	9.9	1.8	1.3	chr11	125552167	125553314	(9533308)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	1769	764722
22	22.0	0.0	8.6	chr11	126063337	126063429	(9023193)	+	(GCCCC)n	Simple_repeat	1	93	(0)	765436
17	6.3	2.7	5.3	chr11	134513139	134513175	(573447)	+	(AAACC)n	Simple_repeat	1	38	(0)	777324
23	16.8	0.0	0.0	chr11	134513182	134513221	(573401)	+	(CA)n	Simple_repeat	1	40	(0)	777325
21	26.1	2.5	2.4	chr12	2795036	2795116	(130480193)	+	(CCGCGC)n	Simple_repeat	1	83	(0)	782670
166	28.6	0.2	0.2	chr12	5796126	5796581	(127478728)	+	(CA)n	Simple_repeat	1	457	(0)	787541
805	24.0	10.0	0.0	chr12	7126216	7126457	(126148852)	C	MER33	DNA/hAT-Charlie	(55)	269	1	789989
17	0.0	0.0	0.0	chr12	7126490	7126510	(126148799)	+	(GTG)n	Simple_repeat	1	21	(0)	789990
57	0.0	0.0	0.0	chr12	7126511	7126559	(126148750)	+	(GT)n	Simple_repeat	1	49	(0)	789991
205	31.7	10.9	2.4	chr12	7126574	7126699	(126148610)	C	L2	LINE/L2	(829)	2590	2453	789987
843	19.5	13.3	10.4	chr12	7126701	7126819	(126148490)	C	MER2	DNA/TcMar-Tigger	(8)	337	224	789992
2231	12.1	0.7	0.0	chr12	7677706	7678011	(125597298)	C	AluSx1	SINE/Alu	(0)	312	5	790692
2248	9.5	1.4	1.4	chr12	9650527	9650822	(123624487)	+	AluY	SINE/Alu	1	296	(15)	794134
267	29.0	4.5	0.0	chr12	9650944	9651050	(123624259)	C	MER92A	LTR/ERV1	(299)	113	2	794135
2101	17.0	6.3	1.2	chr12	9751687	9751892	(123523417)	C	MSTA	LTR/ERVL-MaLR	(0)	428	221	794270
31	3.3	0.0	0.0	chr12	9751893	9751923	(123523386)	+	(AG)n	Simple_repeat	1	31	(0)	794271
2101	17.0	6.3	1.2	chr12	9751924	9752122	(123523187)	C	MSTA	LTR/ERVL-MaLR	(208)	220	2	794270
1912	15.9	5.0	2.3	chr12	24951767	24952257	(108323052)	C	LTR27B	LTR/ERV1	(5)	589	17	815698
59	22.4	5.5	3.6	chr12	28122323	28122559	(105152750)	+	GA-rich	Low_complexity	1	250	(0)	820638
1506	32.8	9.1	3.0	chr12	30529434	30530366	(102744943)	C	L3	LINE/CR1	(378)	3721	2726	823832
3758	13.3	2.7	0.0	chr12	31618391	31618969	(101656340)	C	MER41E	LTR/ERV1	(0)	595	1	825643
5096	10.8	4.5	6.2	chr12	31781961	31782812	(101492497)	+	LTR1A2	LTR/ERV1	1	837	(0)	826042
1260	9.2	0.6	0.0	chr12	32005392	32005554	(101269755)	+	AluSx1	SINE/Alu	133	296	(16)	826558
2131	23.9	4.1	1.5	chr12	33588101	33588643	(99686666)	+	LTR73	LTR/ERV1	1	558	(14)	829198
2219	29.7	8.3	4.0	chr12	33588688	33589855	(99685454)	C	L2a	LINE/L2	(78)	3348	2137	829195
272	28.1	5.9	0.6	chr12	34346699	34346859	(98928450)	C	GSATII	Satellite/centr	(24)	192	23	830075
90	19.0	0.0	1.1	chr12	44972803	44972980	(88302329)	+	(TCCT)n	Simple_repeat	1	178	(0)	840131
50	2.2	0.0	0.0	chr12	49337717	49337763	(83937546)	+	(GT)n	Simple_repeat	1	47	(0)	846989
35	0.0	0.0	0.0	chr12	49337764	49337793	(83937516)	+	(GA)n	Simple_repeat	1	30	(0)	846990
25	24.8	1.8	9.0	chr12	49337821	49337992	(83937317)	+	(AGAGAC)n	Simple_repeat	1	159	(0)	846991
22	21.4	1.3	6.2	chr12	49367401	49367479	(83907830)	+	(GGC)n	Simple_repeat	1	80	(0)	847046
2226	8.9	3.6	0.3	chr12	49767944	49768236	(83507073)	+	AluSp	SINE/Alu	2	304	(9)	847762
320	23.1	4.4	20.2	chr12	49768246	49768286	(83507023)	+	L1MC5a	LINE/L1	8540	8574	(730)	847763
2362	10.1	0.0	0.7	chr12	49883940	49884245	(83391064)	+	AluSx	SINE/Alu	1	304	(8)	847982
2009	25.1	17.7	4.6	chr12	49884246	49884540	(83390769)	C	L2a	LINE/L2	(1450)	1969	1693	847981
20	14.9	0.0	0.0	chr12	52680167	52680203	(80595106)	+	(CCA)n	Simple_repeat	1	37	(0)	853259
20	17.8	5.9	5.6	chr12	53047081	53047165	(80228144)	+	GA-rich	Low_complexity	1	90	(0)	853986
237	35.8	10.8	0.0	chr12	53441353	53441500	(79833809)	+	L2c	LINE/L2	3184	3349	(38)	854770
12	24.1	2.6	0.0	chr12	53441508	53441546	(79833763)	+	(GCCCC)n	Simple_repeat	1	40	(0)	854771
48	31.8	4.5	1.8	chr12	55742749	55743013	(77532296)	+	(TC)n	Simple_repeat	1	277	(0)	858161
7015	4.2	2.2	1.4	chr12	79942727	79943385	(53331924)	C	L1PA6	LINE/L1	(0)	6154	5492	894300
2443	7.4	0.0	3.2	chr12	79943386	79943697	(53331612)	C	AluY	SINE/Alu	(9)	302	1	894301
249	19.6	0.0	0.0	chr12	83173213	83173258	(50102051)	C	L2a	LINE/L2	(0)	3426	3381	898769
2939	19.8	23.0	0.2	chr12	83335712	83335985	(49939324)	C	LTR28	LTR/ERV1	(658)	362	2	898973
9931	8.2	1.3	13.2	chr12	91633761	91635553	(41639756)	+	LTR12C	LTR/ERV1	2	1579	(0)	910212
1791	23.0	9.3	2.1	chr12	93043793	93044303	(40231006)	+	MER74B	LTR/ERVL	56	606	(16)	912617
19	24.7	0.0	0.0	chr12	95204692	95204732	(38070577)	+	(AC)n	Simple_repeat	1	41	(0)	916746
533	22.0	9.6	0.8	chr12	95204801	95204933	(38070376)	+	Tigger16a	DNA/TcMar-Tigger	811	956	(1)	916747
2272	11.3	0.3	0.0	chr12	103804771	103805072	(29470237)	+	AluSq	SINE/Alu	2	304	(9)	931325
565	27.7	13.4	7.7	chr12	103805073	103805277	(29470032)	+	HAL1	LINE/L1	2115	2338	(169)	931324
2322	11.5	0.0	0.0	chr12	103805566	103805870	(29469439)	+	AluSz	SINE/Alu	3	307	(5)	931326
1997	27.7	11.8	3.1	chr12	103994592	103995720	(29279589)	+	L2b	LINE/L2	2144	3372	(3)	931669
245	16.9	2.1	20.2	chr12	104598514	104598632	(28676677)	+	MER5A	DNA/hAT-Charlie	50	146	(43)	932910
23	28.5	1.3	0.0	chr12	106774607	106774682	(26500627)	+	GA-rich	Low_complexity	1	77	(0)	936818
2401	11.1	3.3	2.5	chr12	108485196	108485556	(24789753)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	940399
1798	16.6	3.4	7.3	chr12	108485557	108485784	(24789525)	+	MLT1B	LTR/ERVL-MaLR	180	390	(0)	940398
194	23.5	2.7	0.9	chr12	108595193	108595708	(24679601)	+	(CA)n	Simple_repeat	1	530	(0)	940617
1947	15.5	0.3	1.6	chr12	108628114	108628284	(24647025)	+	AluJb	SINE/Alu	137	304	(8)	940701
777	28.9	1.6	2.9	chr12	108628285	108628317	(24646992)	+	MIR	SINE/MIR	221	251	(11)	940700
54	0.0	0.0	0.0	chr12	108628319	108628364	(24646945)	+	(AC)n	Simple_repeat	1	46	(0)	940703
77	35.1	1.7	1.4	chr12	109683344	109683381	(23591928)	+	(GGAT)n	Simple_repeat	1	39	(0)	943063
58	0.0	0.0	0.0	chr12	109683382	109683433	(23591876)	+	(ATGG)n	Simple_repeat	1	52	(0)	943064
77	35.1	1.7	1.4	chr12	109683434	109683746	(23591563)	+	(GGAT)n	Simple_repeat	4	316	(0)	943065
3373	6.6	3.2	0.0	chr12	110055530	110055952	(23219357)	C	LTR8	LTR/ERV1	(0)	691	255	943887
1049	11.8	0.0	0.0	chr12	110055953	110056088	(23219221)	+	AluSx	SINE/Alu	163	298	(14)	943888
1385	32.0	4.0	10.8	chr12	110060237	110060753	(23214556)	+	L2	LINE/L2	1817	2353	(1066)	943900
475	28.4	4.1	2.1	chr12	111404740	111404883	(21870426)	C	MIRb	SINE/MIR	(22)	246	100	947028
13	19.0	0.0	5.0	chr12	111766958	111766997	(21508312)	+	(GCCCGCT)n	Simple_repeat	1	40	(0)	947853
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
33	5.3	0.0	0.0	chr12	113589460	113589499	(19685810)	+	(CATC)n	Simple_repeat	1	40	(0)	951962
66	3.0	0.0	0.0	chr12	113589701	113589768	(19685541)	+	(TCCA)n	Simple_repeat	1	68	(0)	951963
396	30.1	15.3	0.4	chr12	113805717	113805989	(19469320)	C	L2c	LINE/L2	(12)	3375	3055	952536
2064	9.4	2.0	3.0	chr12	113809204	113809500	(19465809)	C	AluSz6	SINE/Alu	(17)	295	2	952544
1030	9.7	0.7	0.0	chr12	113809501	113809634	(19465675)	C	AluSz	SINE/Alu	(176)	136	2	952545
288	26.0	1.3	0.0	chr12	113809640	113809716	(19465593)	+	L2b	LINE/L2	3288	3365	(10)	952543
368	18.9	12.6	2.6	chr12	113809749	113809862	(19465447)	+	MLT1C	LTR/ERVL-MaLR	8	134	(371)	952546
317	25.7	0.0	1.3	chr12	116197137	116197211	(17078098)	+	UCON94	Unknown	43	116	(17)	957508
232	31.6	7.1	0.0	chr12	116197364	116197480	(17077829)	C	UCON94	Unknown	(0)	133	8	957509
2450	9.1	0.7	0.0	chr12	116197485	116197793	(17077516)	+	AluSp	SINE/Alu	1	311	(2)	957510
145	15.9	5.0	0.6	chr12	116295360	116295677	(16979632)	+	(ATGG)n	Simple_repeat	1	334	(0)	957672
230	28.4	0.0	0.0	chr12	116493008	116493074	(16782235)	+	MLT1M	LTR/ERVL-MaLR	370	436	(236)	958199
917	15.4	1.5	0.0	chr12	116493176	116493305	(16782004)	+	AluJr4	SINE/Alu	1	132	(180)	958200
356	24.6	15.9	0.8	chr12	116551090	116551212	(16724097)	+	L2b	LINE/L2	3231	3375	(0)	958355
120	24.7	1.0	1.3	chr12	116551214	116551521	(16723788)	+	(GATG)n	Simple_repeat	1	311	(0)	958356
102	23.5	0.8	0.4	chr12	116587314	116587556	(16687753)	+	(TCCA)n	Simple_repeat	1	245	(0)	958450
193	19.0	0.8	1.0	chr12	116595654	116596045	(16679264)	+	(TGGA)n	Simple_repeat	1	395	(0)	958474
1534	17.5	1.1	0.7	chr12	116673623	116673892	(16601417)	C	MER66B	LTR/ERV1	(215)	271	1	958664
411	21.5	5.3	4.5	chr12	116673925	116674036	(16601273)	+	LTR16	LTR/ERVL	320	432	(6)	958665
172	15.9	4.9	4.2	chr12	116737305	116737777	(16537532)	+	GA-rich	Low_complexity	1	496	(0)	958800
263	36.1	2.5	2.5	chr12	117098632	117098827	(16176482)	C	MIRb	SINE/MIR	(37)	231	36	959562
279	21.2	6.1	0.0	chr12	117099045	117099163	(16176146)	C	MIRc	SINE/MIR	(75)	193	56	959563
2428	8.5	0.0	0.7	chr12	120540851	120541156	(12734153)	C	AluSp	SINE/Alu	(9)	304	1	967338
36	0.0	0.0	0.0	chr12	121659138	121659168	(11616141)	+	(CA)n	Simple_repeat	1	31	(0)	969965
1005	15.9	6.1	1.2	chr12	122092897	122095314	(11179995)	+	(GT)n	Simple_repeat	1	2566	(0)	971084
514	34.5	9.0	3.3	chr12	122887199	122887803	(10387506)	+	L2b	LINE/L2	2727	3374	(1)	972869
2007	10.2	0.3	1.4	chr12	123711762	123712046	(9563263)	+	AluSx	SINE/Alu	1	282	(30)	974779
22	3.4	0.0	5.9	chr12	123712062	123712095	(9563214)	+	(CA)n	Simple_repeat	1	34	(0)	974780
16	9.9	0.0	5.6	chr12	125049863	125049898	(8225411)	+	G-rich	Low_complexity	1	36	(0)	977468
3510	7.7	1.3	0.6	chr12	127157602	127158069	(6117240)	+	LTR7C	LTR/ERV1	1	471	(0)	981004
144	19.8	0.0	0.0	chr12	130881115	130881391	(2393918)	+	(TG)n	Simple_repeat	1	277	(0)	987395
201	20.9	2.3	0.2	chr12	131271643	131272084	(2003225)	+	(TCA)n	Simple_repeat	1	452	(0)	987937
107	23.0	3.1	4.3	chr12	131283485	131283868	(1991441)	+	(ACACA)n	Simple_repeat	1	396	(0)	987945
679	14.4	3.4	0.0	chr12	132463438	132464676	(810633)	+	(CATCAC)n	Simple_repeat	1	1281	(0)	989492
101	33.6	0.6	0.8	chr12	132544539	132544892	(730417)	+	(ATGATG)n	Simple_repeat	1	356	(0)	989581
494	28.7	1.9	5.4	chr12	132544899	132545064	(730245)	C	MIR	SINE/MIR	(11)	251	92	989582
279	25.0	11.1	0.0	chr12	132589237	132589316	(685993)	C	MLT1D	LTR/ERVL-MaLR	(181)	429	340	989627
2491	16.0	4.5	1.3	chr13	21010614	21011062	(93353266)	+	MER101	LTR/ERV1	11	474	(0)	995306
168	20.2	2.4	0.5	chr13	28531565	28531941	(85832387)	+	(TG)n	Simple_repeat	1	386	(0)	1006902
346	23.4	1.3	0.0	chr13	29582051	29582127	(84782201)	C	MIR	SINE/MIR	(74)	188	111	1008332
395	31.6	8.7	0.0	chr13	29582153	29582361	(84781967)	C	Tigger15a	DNA/TcMar-Tigger	(271)	444	216	1008333
214	22.6	12.2	5.0	chr13	29582454	29582574	(84781754)	C	L2a	LINE/L2	(1)	3425	3295	1008334
215	36.1	10.6	8.4	chr13	41382234	41382850	(72981478)	+	L2	LINE/L2	245	876	(2543)	1025777
18	10.0	4.1	5.9	chr13	41457466	41457515	(72906813)	+	(GCCCCG)n	Simple_repeat	1	49	(0)	1025879
2628	7.0	0.3	1.3	chr13	48095346	48095659	(66268669)	C	AluY	SINE/Alu	(0)	311	1	1036247
11137	5.0	1.2	0.0	chr13	80673900	80676046	(33688282)	+	L1PA5	LINE/L1	3985	6154	(0)	1080607
21998	10.2	1.4	1.3	chr13	80689597	80695750	(33668578)	+	L1PA7	LINE/L1	328	6469	(0)	1080621
1064	20.1	0.0	6.4	chr13	80736003	80736236	(33628092)	C	AluJr4	SINE/Alu	(0)	312	94	1080664
4801	17.6	1.7	3.8	chr13	90100961	90102668	(24261660)	C	L1MA4A	LINE/L1	(92)	6913	5230	1092508
2243	12.9	0.0	1.9	chr13	90227871	90228188	(24136140)	+	AluSx	SINE/Alu	1	312	(0)	1092666
15	5.6	0.0	0.0	chr13	90273465	90273483	(24090845)	+	(A)n	Simple_repeat	1	19	(0)	1092720
2324	12.2	0.0	0.0	chr13	90273488	90273789	(24090539)	+	AluSx	SINE/Alu	1	302	(10)	1092721
282	26.8	10.9	5.1	chr13	90273794	90273912	(24090416)	+	L1ME3A	LINE/L1	3738	3867	(2279)	1092722
274	34.8	1.4	0.7	chr13	90382453	90382591	(23981737)	C	L1M5	LINE/L1	(1038)	5108	4969	1092857
24	26.9	2.8	3.6	chr13	90382601	90382709	(23981619)	+	(TTTGGTT)n	Simple_repeat	1	112	(0)	1092858
16358	18.6	4.7	2.3	chr13	90519268	90524989	(23839339)	+	L1PREC2	LINE/L1	1107	7020	(1121)	1093036
2087	15.4	0.0	0.0	chr13	90579696	90579994	(23784334)	+	AluSq2	SINE/Alu	1	299	(14)	1093093
693	36.5	11.2	0.0	chr13	90580036	90580424	(23783904)	C	MamGyp-int	LTR/Gypsy	(4076)	1027	590	1093088
306	38.4	2.8	2.8	chr13	90607663	90607914	(23756414)	+	L1MEd	LINE/L1	1789	2040	(5063)	1093130
231	26.8	10.5	1.7	chr13	90607919	90608153	(23756175)	+	L1MEd	LINE/L1	1953	2232	(4871)	1093130
22364	10.6	1.1	0.3	chr13	90812907	90819339	(23544989)	+	L1PA7	LINE/L1	8	6466	(3)	1093424
37	5.1	0.0	0.0	chr13	91029045	91029085	(23335243)	+	(CA)n	Simple_repeat	1	41	(0)	1093674
1882	10.5	7.8	4.4	chr13	91057371	91057665	(23306663)	+	AluSz6	SINE/Alu	1	306	(6)	1093710
109	5.6	0.6	2.5	chr13	91057667	91057824	(23306504)	+	(GGAAA)n	Simple_repeat	1	159	(0)	1093711
17	25.4	0.0	0.0	chr13	91134251	91134297	(23230031)	+	(TTTTT)n	Simple_repeat	1	47	(0)	1093836
644	28.0	4.6	0.0	chr13	91245221	91245406	(23118922)	+	L2a	LINE/L2	2500	2694	(725)	1093982
511	29.1	6.1	3.3	chr13	91245421	91245699	(23118629)	+	L2a	LINE/L2	2873	3155	(271)	1093982
1049	26.1	9.2	4.1	chr13	91261087	91261426	(23102902)	+	LTR33	LTR/ERVL	15	373	(142)	1094011
870	29.2	7.7	3.1	chr13	91511137	91512090	(22852238)	C	L1MEg	LINE/L1	(4701)	2336	1129	1094353
286	32.6	5.6	3.2	chr13	91512641	91512954	(22851374)	C	L1MEg	LINE/L1	(6071)	352	31	1094353
66	27.4	1.6	0.5	chr13	91554219	91554430	(22809898)	+	(AC)n	Simple_repeat	1	214	(0)	1094409
2277	11.6	0.0	0.0	chr13	91680169	91680471	(22683857)	+	AluSg	SINE/Alu	1	303	(7)	1094596
2938	22.9	9.8	1.7	chr13	91680472	91680591	(22683737)	+	Charlie1a	DNA/hAT-Charlie	729	888	(567)	1094595
1698	21.2	2.8	4.7	chr13	91680586	91681134	(22683194)	+	Charlie1	DNA/hAT-Charlie	2244	2781	(0)	1094597
399	33.8	4.2	7.1	chr13	91748525	91748989	(22615339)	C	L2c	LINE/L2	(8)	3379	2929	1094688
3257	5.7	0.7	0.1	chr13	92539149	92539654	(21824674)	C	L1P3	LINE/L1	(477)	5677	5170	1095703
14	12.8	2.6	5.0	chr13	94662631	94662669	(19701659)	+	A-rich	Low_complexity	1	40	(0)	1098687
2410	6.6	0.0	0.0	chr13	95270814	95271100	(19093228)	+	AluY	SINE/Alu	1	287	(24)	1099676
1476	25.1	5.1	4.2	chr13	95274225	95274738	(19089590)	+	MER74B	LTR/ERVL	46	540	(82)	1099683
2467	8.1	0.0	2.9	chr13	95683645	95683951	(18680377)	+	AluSg7	SINE/Alu	1	298	(11)	1100536
2587	10.7	8.2	3.9	chr13	95683952	95684002	(18680326)	+	MSTA	LTR/ERVL-MaLR	387	428	(0)	1100535
10932	12.5	2.9	0.9	chr13	95684003	95685600	(18678728)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1100535
205	29.0	13.1	2.0	chr13	99058846	99059137	(15305191)	+	L2b	LINE/L2	1986	2314	(1105)	1105626
3159	8.7	5.3	3.7	chr13	110602237	110602423	(3761905)	+	MER4A1	LTR/ERV1	1	189	(283)	1121488
2324	9.3	0.0	0.7	chr13	110602424	110602723	(3761605)	+	AluSp	SINE/Alu	1	298	(15)	1121489
3341	7.5	0.8	13.0	chr13	110965260	110965842	(3398486)	+	LTR10F	LTR/ERV1	1	511	(0)	1121994
2358	4.0	0.7	0.0	chr13	113363228	113363503	(1000825)	C	AluSx3	SINE/Alu	(32)	279	2	1124587
2495	6.0	0.0	6.3	chr14	20177106	20177436	(86866282)	+	AluY	SINE/Alu	1	310	(1)	1127627
2101	11.5	1.3	9.9	chr14	20177437	20177742	(86865976)	C	HERV1_LTRe	LTR/ERV1	(120)	417	143	1127626
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
624	2.7	0.0	0.0	chr14	20613790	20613862	(86429856)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	1128344
2159	10.0	2.4	4.9	chr14	20682388	20682735	(86360983)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1128458
13	19.7	4.0	3.9	chr14	22983129	22983178	(84060540)	+	GA-rich	Low_complexity	1	52	(0)	1132085
17	9.4	2.6	5.1	chr14	23113045	23113082	(83930636)	+	(GGT)n	Simple_repeat	1	39	(0)	1132311
19	10.2	7.1	0.0	chr14	23306619	23306660	(83737058)	+	(AGCCC)n	Simple_repeat	1	45	(0)	1132674
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
3051	17.6	1.0	0.0	chr14	30822085	30822591	(76221127)	+	LTR53	LTR/ERVL	8	519	(0)	1142373
64	1.7	0.0	0.0	chr14	31058518	31058576	(75985142)	+	(TG)n	Simple_repeat	1	59	(0)	1142831
1512	19.3	0.0	4.7	chr14	31058580	31058875	(75984843)	C	AluJo	SINE/Alu	(30)	282	1	1142832
16894	15.2	0.7	1.7	chr14	34651989	34654107	(72389611)	+	HERVH-int	LTR/ERV1	5110	7210	(503)	1148337
296	32.4	9.5	7.5	chr14	35353250	35353580	(71690138)	+	MamGypLTR1d	LTR/Gypsy	108	445	(368)	1149856
627	25.7	4.9	0.0	chr14	36264598	36264772	(70778946)	+	MLT1J	LTR/ERVL-MaLR	1	184	(328)	1151352
275	29.5	14.0	4.9	chr14	36264798	36265043	(70778675)	+	MLT1J	LTR/ERVL-MaLR	241	512	(0)	1151352
278	30.5	2.8	2.8	chr14	37168563	37168670	(69875048)	+	MLT1O	LTR/ERVL-MaLR	115	222	(320)	1152588
2302	20.2	8.0	5.3	chr14	37168797	37169377	(69874341)	+	LTR75B	LTR/ERVL	4	601	(7)	1152589
201	34.6	10.6	0.8	chr14	54755032	54755159	(52288559)	C	L2	LINE/L2	(613)	2806	2665	1176401
247	32.6	9.0	0.8	chr14	54755235	54755367	(52288351)	C	L2	LINE/L2	(907)	2512	2368	1176401
313	27.9	4.9	1.4	chr14	58395685	58395822	(48647896)	+	MIRb	SINE/MIR	1	143	(125)	1182162
2363	6.2	0.3	4.5	chr14	63101881	63102189	(43941529)	+	AluY	SINE/Alu	1	296	(15)	1188735
228	32.3	13.3	3.1	chr14	63102387	63102514	(43941204)	+	L2c	LINE/L2	3241	3383	(4)	1188736
2341	8.8	0.7	0.7	chr14	92120880	92121185	(14922533)	+	AluSq2	SINE/Alu	1	306	(7)	1236927
1161	13.3	0.0	1.2	chr14	96764053	96764220	(10279498)	+	MER1A	DNA/hAT-Charlie	66	231	(298)	1245478
969	23.9	9.0	0.0	chr14	96764221	96764489	(10279229)	+	MLT1E1A	LTR/ERVL-MaLR	338	633	(47)	1245479
90	33.6	2.7	0.5	chr14	100590372	100590782	(6452936)	+	(TAACCC)n	Simple_repeat	1	422	(0)	1252107
1390	11.4	11.2	1.8	chr14	101230187	101230462	(5813256)	C	LTR1A2	LTR/ERV1	(532)	305	1	1252900
29	0.0	0.0	0.0	chr14	103105359	103105383	(3938335)	+	(TG)n	Simple_repeat	1	25	(0)	1256205
18	7.2	3.2	3.1	chr14	103314649	103314679	(3729039)	+	(AC)n	Simple_repeat	1	32	(0)	1256544
1855	13.6	2.9	1.6	chr14	103314884	103315191	(3728527)	+	AluJb	SINE/Alu	1	312	(0)	1256545
2230	7.8	0.0	0.0	chr14	103731028	103731295	(3312423)	+	AluSx1	SINE/Alu	1	268	(44)	1257378
1233	12.1	0.0	0.0	chr15	20340075	20340239	(81650950)	+	AluSx	SINE/Alu	96	260	(52)	1263200
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
63	0.0	0.0	0.0	chr15	20350667	20350720	(81640469)	+	(GT)n	Simple_repeat	1	54	(0)	1263214
153	18.8	5.5	2.6	chr15	22251361	22251796	(79739393)	+	(CA)n	Simple_repeat	1	460	(0)	1265530
285	27.3	0.3	1.1	chr15	28099778	28100560	(73890629)	+	(CA)n	Simple_repeat	1	785	(0)	1273402
321	18.8	8.2	2.1	chr15	28914928	28916005	(73075184)	+	(AC)n	Simple_repeat	1	1166	(0)	1274732
182	28.8	11.1	2.4	chr15	36428039	36428120	(65563069)	+	MIR	SINE/MIR	173	262	(0)	1285640
1134	21.1	6.9	11.6	chr15	38602014	38602393	(63388796)	+	MER39	LTR/ERV1	306	666	(41)	1288568
47	16.5	3.5	5.4	chr15	40440994	40441136	(61550053)	+	(GCCC)n	Simple_repeat	1	148	(0)	1291194
1640	15.8	2.2	2.5	chr15	40559108	40559386	(61431803)	C	AluJr4	SINE/Alu	(33)	279	2	1291423
2336	12.1	0.3	0.3	chr15	40665028	40665332	(61325857)	C	AluSx	SINE/Alu	(7)	305	1	1291676
2831	16.7	9.9	2.8	chr15	45048640	45049244	(56941945)	C	MER61F	LTR/ERV1	(23)	653	1	1299989
12225	14.8	1.6	3.5	chr15	45049247	45050086	(56941103)	C	LTR25-int	LTR/ERV1	(1)	7187	6359	1299989
308	24.9	5.3	3.0	chr15	50260631	50260754	(51730435)	C	MIR	SINE/MIR	(56)	212	82	1307370
3487	11.4	3.3	0.2	chr15	51634545	51635069	(50356120)	C	MER41B	LTR/ERV1	(88)	546	5	1309786
3682	8.6	3.3	0.6	chr15	51635073	51635601	(50355588)	C	MER41-int	LTR/ERV1	(0)	5946	5403	1309786
1601	19.6	4.4	0.6	chr15	51646967	51647294	(50343895)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	1309812
1481	23.8	8.3	4.7	chr15	51647295	51647579	(50343610)	C	L2a	LINE/L2	(318)	3108	2816	1309811
205	33.8	4.0	7.2	chr15	57322339	57322491	(44668698)	+	L2b	LINE/L2	3023	3170	(205)	1318501
69	31.7	1.6	0.4	chr15	63897116	63897361	(38093828)	+	(AC)n	Simple_repeat	1	250	(0)	1329352
55	0.0	0.0	0.0	chr15	63897420	63897466	(38093723)	+	(AC)n	Simple_repeat	1	47	(0)	1329352
227	30.2	5.6	1.6	chr15	65252387	65252507	(36738682)	+	MamRep434	DNA/TcMar-Tigger	268	393	(33)	1332219
337	28.8	8.1	0.6	chr15	68053723	68053883	(33937306)	+	MIRc	SINE/MIR	95	268	(0)	1337660
3327	13.9	4.1	11.8	chr15	68991613	68992346	(32998843)	C	LTR76	LTR/ERV1	(0)	675	1	1339417
31	11.2	2.0	0.0	chr15	70097767	70097815	(31893374)	+	(AC)n	Simple_repeat	1	50	(0)	1341464
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
51	35.5	0.0	0.0	chr15	74173270	74173468	(27817721)	+	(ACACAC)n	Simple_repeat	1	199	(0)	1348387
282	34.2	15.6	1.2	chr15	74389383	74389628	(27601561)	C	L2a	LINE/L2	(85)	3341	3054	1348752
3945	13.8	9.0	4.3	chr15	75065784	75066524	(26924665)	C	LTR19C	LTR/ERV1	(0)	779	1	1350108
16	27.1	0.0	3.3	chr15	76337212	76337229	(25653960)	+	(TTTGGTT)n	Simple_repeat	1	33	(28)	1352422
13	7.0	10.0	0.0	chr15	76337230	76337259	(25653930)	+	(GTTT)n	Simple_repeat	1	33	(0)	1352423
16	27.1	0.0	3.3	chr15	76337260	76337272	(25653917)	+	(TTTGGTT)n	Simple_repeat	34	61	(0)	1352422
346	25.7	10.8	4.5	chr15	77737501	77737810	(24253379)	+	L2a	LINE/L2	631	962	(1134)	1354569
2514	23.7	12.8	2.4	chr15	82018199	82019017	(19972172)	C	MLT1J1-int	LTR/ERVL-MaLR	(5)	1382	467	1362193
413	22.8	25.6	0.0	chr15	82540917	82541131	(19450058)	+	L2a	LINE/L2	3105	3393	(33)	1363031
4485	6.1	1.3	3.5	chr15	88920334	88920868	(13070321)	+	LTR8	LTR/ERV1	1	530	(161)	1373257
969	16.0	1.2	3.0	chr15	89659252	89659420	(12331769)	+	AluJo	SINE/Alu	137	302	(10)	1374638
46	22.1	2.5	1.6	chr15	89659421	89659540	(12331649)	+	GA-rich	Low_complexity	1	123	(0)	1374639
979	26.1	11.9	4.6	chr15	89659542	89659914	(12331275)	+	L1M5	LINE/L1	5313	5729	(513)	1374634
33	20.1	5.2	2.0	chr15	90062142	90062237	(11928952)	+	(TC)n	Simple_repeat	1	101	(0)	1375522
27	24.7	4.9	3.1	chr15	90062238	90062263	(11928926)	+	(TCCCTC)n	Simple_repeat	1	128	(0)	1375523
456	31.5	5.6	4.5	chr15	90901701	90901818	(11089371)	+	L1ME4c	LINE/L1	282	409	(421)	1377331
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
2023	12.8	4.1	0.0	chr15	96273355	96273636	(5717553)	C	AluJb	SINE/Alu	(18)	294	1	1385646
234	33.7	7.3	4.5	chr15	96273842	96274040	(5717149)	+	L2b	LINE/L2	3148	3352	(23)	1385647
29	25.4	0.0	4.1	chr15	96357557	96357653	(5633536)	+	(TTTCC)n	Simple_repeat	1	97	(0)	1385754
40	0.0	0.0	0.0	chr15	96357693	96357726	(5633463)	+	(TG)n	Simple_repeat	1	34	(0)	1385755
36	14.7	0.0	0.0	chr15	96357727	96357786	(5633403)	+	(AG)n	Simple_repeat	1	60	(0)	1385756
1959	17.4	0.5	4.9	chr15	101107736	101108121	(883068)	+	MLT1B	LTR/ERVL-MaLR	1	369	(21)	1392331
5212	12.1	22.1	0.7	chr15	101979520	101980763	(10426)	+	TAR1	Satellite/telo	483	2068	(43)	1393518
328	3.1	1.9	3.2	chr15	101980765	101981189	(10000)	+	(GGTTAG)n	Simple_repeat	1	433	(0)	1393519
15	8.2	0.0	3.6	chr16	175571	175598	(90162747)	+	(CCT)n	Simple_repeat	1	28	(0)	1394301
1101	14.7	0.0	0.0	chr16	396531	396693	(89941652)	+	AluJo	SINE/Alu	14	176	(136)	1394689
906	13.1	0.0	0.0	chr16	396819	396940	(89941405)	C	AluJb	SINE/Alu	(21)	291	170	1394690
13	14.2	5.6	7.0	chr16	788596	788649	(89549696)	+	(GGC)n	Simple_repeat	1	57	(0)	1395212
22	13.6	1.9	3.8	chr16	1277967	1278018	(89060327)	+	G-rich	Low_complexity	1	53	(0)	1395679
67	1.4	0.0	3.9	chr16	1329122	1329199	(89009146)	+	(AATTCACCA)n	Simple_repeat	1	78	(0)	1395751
13	7.2	3.0	5.9	chr16	1379919	1379951	(88958394)	+	(CCTGCA)n	Simple_repeat	1	34	(0)	1395812
1544	13.6	0.0	3.0	chr16	1472834	1473069	(88865276)	C	AluJb	SINE/Alu	(83)	229	1	1395963
31	19.3	0.0	0.0	chr16	1473081	1473139	(88865206)	+	(AC)n	Simple_repeat	1	59	(0)	1395964
2471	8.1	0.3	0.0	chr16	1611534	1611840	(88726505)	+	AluSz	SINE/Alu	2	309	(3)	1396169
17	13.7	0.0	0.0	chr16	1773265	1773296	(88565049)	+	(GCCGGG)n	Simple_repeat	1	32	(0)	1396373
12	18.6	5.4	0.0	chr16	1832759	1832795	(88505550)	+	(CTCCT)n	Simple_repeat	1	39	(0)	1396451
4838	8.3	0.4	11.7	chr16	1944109	1944737	(88393608)	+	LTR8	LTR/ERV1	146	691	(0)	1396686
2036	13.7	0.0	0.3	chr16	2981187	2981478	(87356867)	C	AluSz	SINE/Alu	(21)	291	1	1398285
13	24.8	4.2	0.0	chr16	3023699	3023746	(87314599)	+	(CCCCAG)n	Simple_repeat	1	50	(0)	1398347
332	33.1	4.6	4.0	chr16	3101322	3101494	(87236851)	+	MIRb	SINE/MIR	70	243	(25)	1398495
1013	20.8	3.8	4.1	chr16	3101602	3101691	(87236654)	C	MER33	DNA/hAT-Charlie	(8)	316	232	1398496
2509	6.6	0.3	0.0	chr16	3101692	3101994	(87236351)	C	AluSp	SINE/Alu	(9)	304	1	1398497
307	24.8	3.5	9.2	chr16	3131837	3131956	(87206389)	+	LTR41C	LTR/ERVL	56	168	(533)	1398564
205	31.3	2.0	5.7	chr16	3132017	3132121	(87206224)	+	MIRb	SINE/MIR	53	153	(115)	1398565
622	0.0	0.0	0.0	chr16	3189634	3189705	(87148640)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	1398695
16	9.8	0.0	0.0	chr16	8183108	8183129	(82155216)	+	(T)n	Simple_repeat	1	22	(0)	1408491
5201	10.4	0.8	2.5	chr16	9077735	9078085	(81260260)	C	MER4E1	LTR/ERV1	(0)	781	431	1410537
2343	11.2	0.0	0.0	chr16	9078086	9078397	(81259948)	+	AluSx	SINE/Alu	1	312	(0)	1410538
3338	15.1	6.6	1.7	chr16	10313281	10313885	(80024460)	+	L1MC3	LINE/L1	7114	7750	(35)	1413189
332	30.3	1.6	1.2	chr16	11224051	11224193	(79114152)	C	MIRb	SINE/MIR	(79)	189	45	1415154
14	11.9	2.4	7.0	chr16	11796979	11797020	(78541325)	+	(GCCCCC)n	Simple_repeat	1	43	(0)	1416499
984	15.8	0.0	0.0	chr16	14296620	14296777	(76041568)	C	AluJr	SINE/Alu	(18)	294	137	1421800
90	33.0	1.8	2.8	chr16	14296778	14297157	(76041188)	+	(TTTC)n	Simple_repeat	1	387	(0)	1421801
121	25.4	3.8	0.0	chr16	15495944	15496288	(74842057)	+	(TGATGG)n	Simple_repeat	1	358	(0)	1424531
347	32.8	5.8	9.4	chr16	18535594	18535802	(71802543)	+	L2	LINE/L2	2648	2842	(577)	1431322
2110	13.7	0.0	0.0	chr16	18535803	18536095	(71802250)	C	AluSx3	SINE/Alu	(18)	293	1	1431323
2281	11.1	0.0	0.0	chr16	18927069	18927375	(71410970)	+	AluSq2	SINE/Alu	1	307	(6)	1432182
33	14.0	2.5	4.8	chr16	18927376	18927456	(71410889)	+	GA-rich	Low_complexity	1	83	(0)	1432183
2542	5.7	0.0	0.0	chr16	18927462	18927762	(71410583)	+	AluY	SINE/Alu	1	301	(10)	1432184
2733	14.9	7.5	3.7	chr16	19487759	19488251	(70850094)	C	MER74A	LTR/ERVL	(39)	519	2	1433687
2071	15.1	0.0	2.2	chr16	21564232	21564549	(68773796)	+	AluSz6	SINE/Alu	1	311	(1)	1438158
47	11.3	2.1	4.1	chr16	21564550	21564645	(68773700)	+	GA-rich	Low_complexity	1	98	(0)	1438159
2037	15.9	0.0	0.3	chr16	21564662	21564963	(68773382)	+	AluJb	SINE/Alu	5	305	(7)	1438160
463	24.0	11.7	0.0	chr16	23803742	23803870	(66534475)	C	L1ME3G	LINE/L1	(710)	214	69	1443172
16	0.0	0.0	0.0	chr16	24136097	24136113	(66202232)	+	(T)n	Simple_repeat	1	17	(0)	1443948
20	10.8	5.0	0.0	chr16	24539917	24539956	(65798389)	+	(GGC)n	Simple_repeat	1	42	(0)	1444971
752	19.8	22.2	0.0	chr16	25771982	25772153	(64566192)	C	MER58A	DNA/hAT-Charlie	(2)	222	2	1447679
36	16.8	0.0	0.0	chr16	27449416	27449477	(62888868)	+	(GT)n	Simple_repeat	1	62	(0)	1451181
432	26.3	1.7	0.8	chr16	27458847	27458965	(62879380)	+	MER102c	DNA/hAT-Charlie	212	331	(0)	1451205
141	21.6	0.3	0.0	chr16	27459025	27459310	(62879035)	+	(TGGA)n	Simple_repeat	1	287	(0)	1451206
225	35.1	5.1	4.3	chr16	29739859	29739974	(60598371)	C	L2b	LINE/L2	(0)	3375	3259	1456452
120	21.0	0.0	0.4	chr16	29739982	29740225	(60598120)	+	(ATCC)n	Simple_repeat	1	244	(0)	1456453
6251	14.2	2.2	0.5	chr16	29740241	29741225	(60597120)	+	LTR5B	LTR/ERVK	1	1002	(0)	1456454
2219	9.3	0.7	0.0	chr16	29943143	29943443	(60394902)	+	AluSg	SINE/Alu	1	303	(7)	1456930
3478	12.0	7.8	2.0	chr16	29943444	29943749	(60394596)	+	LTR19B	LTR/ERV1	240	580	(0)	1456931
13	7.0	6.2	2.9	chr16	30090488	30090519	(60247826)	+	(CCTGAC)n	Simple_repeat	1	34	(0)	1457244
177	8.1	0.4	2.2	chr16	30749000	30749272	(59589073)	+	(GGT)n	Simple_repeat	1	274	(0)	1458791
20	4.1	0.0	0.0	chr16	30749273	30749297	(59589048)	+	(TG)n	Simple_repeat	1	25	(0)	1458792
2407	6.6	1.0	0.3	chr16	30749340	30749641	(59588704)	C	AluSg	SINE/Alu	(4)	306	3	1458793
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
1244	24.9	7.5	3.1	chr16	31253625	31254108	(59084237)	C	L2a	LINE/L2	(1152)	2267	1761	1459954
12	15.5	5.3	2.5	chr16	46563275	46563312	(43775033)	+	A-rich	Low_complexity	1	40	(0)	1465615
5387	13.7	9.1	0.9	chr16	46633073	46634052	(43704293)	C	MER52C	LTR/ERV1	(210)	1068	1	1465721
421	10.7	0.0	0.0	chr16	47008782	47008837	(43329508)	C	MLT1E3	LTR/ERVL-MaLR	(411)	213	158	1466534
2070	13.5	0.0	0.0	chr16	47008950	47009270	(43329075)	C	AluSx1	SINE/Alu	(0)	312	1	1466535
2400	9.3	0.3	0.0	chr16	48458115	48458415	(41879930)	C	AluSx1	SINE/Alu	(10)	302	1	1468844
3394	24.0	8.1	5.8	chr16	48458416	48458791	(41879554)	C	L1ME3A	LINE/L1	(576)	6095	5724	1468843
290	26.9	0.0	1.1	chr16	50273959	50274052	(40064293)	C	L2c	LINE/L2	(211)	3176	3084	1472184
112	28.6	0.3	0.7	chr16	55465598	55465891	(34872454)	+	(AC)n	Simple_repeat	1	295	(0)	1481479
444	32.0	23.1	4.3	chr16	56289865	56290412	(34047933)	+	L2b	LINE/L2	2708	3361	(14)	1482837
29	32.1	0.0	1.0	chr16	57057784	57057886	(33280459)	+	(GTG)n	Simple_repeat	1	103	(0)	1484259
39	6.3	0.0	0.0	chr16	57057891	57057940	(33280405)	+	(TGGTGATGG)n	Simple_repeat	1	50	(0)	1484260
1996	13.5	0.0	6.3	chr16	57508888	57509220	(32829125)	+	AluSz	SINE/Alu	1	312	(0)	1485206
133	13.0	2.3	2.9	chr16	57628843	57629108	(32709237)	+	(AGTGTG)n	Simple_repeat	1	272	(0)	1485455
741	24.6	3.4	1.2	chr16	57690204	57690376	(32647969)	+	MIRb	SINE/MIR	45	221	(47)	1485580
21	20.2	0.0	4.8	chr16	58025806	58025867	(32312478)	+	(CGCT)n	Simple_repeat	1	62	(0)	1486285
2413	10.4	0.0	0.0	chr16	58055313	58055621	(32282724)	+	AluSp	SINE/Alu	1	309	(4)	1486336
215	30.3	8.4	7.6	chr16	58055622	58055664	(32282681)	C	L2a	LINE/L2	(91)	3335	3294	1486335
379	25.9	15.9	4.6	chr16	58055655	58055893	(32282452)	C	L2a	LINE/L2	(337)	3082	2812	1486335
2427	5.9	0.0	2.3	chr16	58055896	58056198	(32282147)	C	AluYj4	SINE/Alu	(15)	296	1	1486337
19	12.9	0.0	2.7	chr16	68085612	68085648	(22252697)	+	(GCC)n	Simple_repeat	1	37	(0)	1502902
11	24.2	5.5	1.7	chr16	68085649	68085665	(22252680)	+	(AGCTGC)n	Simple_repeat	2	58	(0)	1502903
2212	11.2	0.7	0.0	chr16	70435847	70436140	(19902205)	+	AluSx1	SINE/Alu	2	297	(15)	1507974
2203	9.0	0.0	6.9	chr16	70436146	70436477	(19901868)	+	AluSx	SINE/Alu	1	309	(3)	1507975
34	24.6	0.0	2.3	chr16	75234052	75234138	(15104207)	+	(CA)n	Simple_repeat	1	87	(0)	1516365
44	0.0	0.0	0.0	chr16	75234165	75234202	(15104143)	+	(AC)n	Simple_repeat	1	38	(0)	1516366
158	40.3	0.1	0.1	chr16	79786429	79787076	(10551269)	+	(CCA)n	Simple_repeat	1	649	(0)	1524150
74	20.5	3.2	3.6	chr16	79964148	79964199	(10374146)	+	(TTTC)n	Simple_repeat	1	93	(131)	1524498
28	22.0	3.2	4.1	chr16	79964200	79964294	(10374051)	+	(TCC)n	Simple_repeat	1	98	(0)	1524499
74	20.5	3.2	3.6	chr16	79964295	79964364	(10373981)	+	(TTTC)n	Simple_repeat	94	224	(0)	1524498
2005	15.9	0.0	0.0	chr16	79964370	79964658	(10373687)	C	AluJb	SINE/Alu	(23)	289	1	1524500
36	35.2	2.5	4.5	chr16	79982917	79983152	(10355193)	+	(TTCT)n	Simple_repeat	1	242	(0)	1524529
1421	16.5	11.8	5.3	chr16	81410088	81410372	(8927973)	+	AluJo	SINE/Alu	1	306	(6)	1527192
2406	8.7	0.7	0.0	chr16	81410381	81410680	(8927665)	+	AluSz	SINE/Alu	1	302	(10)	1527193
196	18.6	10.6	0.0	chr16	81495883	81495941	(8842404)	+	MIR3	SINE/MIR	119	184	(24)	1527393
430	28.1	8.8	0.0	chr16	81496100	81496234	(8842111)	+	MIR	SINE/MIR	115	262	(0)	1527394
355	27.8	9.1	3.4	chr16	81496245	81496419	(8841926)	C	L2a	LINE/L2	(3)	3423	3238	1527395
168	20.8	1.7	0.0	chr16	81733326	81733681	(8604664)	+	(CCAT)n	Simple_repeat	1	362	(0)	1527889
326	18.8	2.0	1.0	chr16	83967365	83968058	(6370287)	+	(GGAT)n	Simple_repeat	1	708	(0)	1531949
360	29.3	13.8	2.2	chr16	84629968	84630152	(5708193)	+	L3	LINE/CR1	3756	3965	(134)	1533243
27	20.5	0.0	5.0	chr16	85150421	85150500	(5187845)	+	G-rich	Low_complexity	1	80	(0)	1534285
64	6.8	0.0	0.0	chr16	85150657	85150733	(5187612)	+	(TG)n	Simple_repeat	1	77	(0)	1534286
120	26.6	2.1	1.2	chr16	85156858	85157340	(5181005)	+	(ATCC)n	Simple_repeat	1	487	(0)	1534296
50	33.5	1.8	1.3	chr16	85245870	85246089	(5092256)	+	(TG)n	Simple_repeat	1	224	(0)	1534483
389	36.9	2.5	0.0	chr16	85359414	85359611	(4978734)	+	MIR	SINE/MIR	35	237	(25)	1534708
146	38.6	1.1	2.3	chr16	85382708	85383522	(4954823)	+	(CA)n	Simple_repeat	1	824	(0)	1534748
230	21.9	2.4	1.2	chr16	85400250	85400915	(4937430)	+	(TG)n	Simple_repeat	1	674	(0)	1534780
1216	24.5	11.0	4.6	chr16	85402930	85403412	(4934933)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	1	1534781
2116	12.1	0.0	3.8	chr16	85403508	85403820	(4934525)	+	AluJb	SINE/Alu	1	301	(11)	1534783
96	24.7	3.5	1.6	chr16	85433564	85433588	(4904757)	+	(GATG)n	Simple_repeat	1	25	(0)	1534830
48	0.0	0.0	0.0	chr16	85433589	85433632	(4904713)	+	(TGGA)n	Simple_repeat	1	44	(0)	1534831
96	24.7	3.5	1.6	chr16	85433633	85433918	(4904427)	+	(GATG)n	Simple_repeat	2	293	(0)	1534832
255	17.6	3.3	1.5	chr16	85519198	85519771	(4818574)	+	(CATCAC)n	Simple_repeat	1	593	(0)	1534997
628	25.0	0.7	0.0	chr16	85565951	85566098	(4772247)	+	MIR	SINE/MIR	48	196	(66)	1535072
264	11.0	7.2	1.5	chr16	85572020	85572574	(4765771)	+	(AC)n	Simple_repeat	1	595	(0)	1535081
114	23.4	5.1	4.7	chr16	85716249	85716734	(4621611)	+	GA-rich	Low_complexity	1	511	(0)	1535286
441	26.5	3.8	0.5	chr16	85728702	85728872	(4609473)	C	MIRb	SINE/MIR	(22)	208	33	1535317
357	26.7	4.1	1.4	chr16	85728880	85729041	(4609304)	C	MER5A	DNA/hAT-Charlie	(0)	166	4	1535318
217	31.3	2.9	0.0	chr16	85729161	85729227	(4609118)	+	MIR	SINE/MIR	73	141	(121)	1535319
237	38.4	6.7	0.0	chr16	86591220	86591344	(3747001)	C	L2b	LINE/L2	(21)	3354	3221	1536890
142	20.5	0.7	0.7	chr16	86591347	86591642	(3746703)	+	(TGA)n	Simple_repeat	1	298	(0)	1536891
325	27.5	2.1	0.0	chr16	86591647	86591737	(3746608)	C	MIRb	SINE/MIR	(34)	234	142	1536892
518	18.7	1.1	1.1	chr16	87221591	87222632	(3115713)	+	(ATCACC)n	Simple_repeat	1	1054	(0)	1538036
1170	16.9	14.7	0.0	chr16	87384639	87384881	(2953464)	+	AluJr	SINE/Alu	20	304	(8)	1538341
448	32.3	3.0	3.0	chr16	88373072	88373237	(1965108)	C	MIR	SINE/MIR	(33)	229	64	1539879
44	27.4	1.8	4.0	chr16	88492082	88492252	(1846093)	+	(CCCT)n	Simple_repeat	1	174	(0)	1540027
11	9.1	2.3	11.1	chr16	88663355	88663398	(1674947)	+	(GGCGTC)n	Simple_repeat	1	45	(0)	1540289
370	35.1	6.6	1.2	chr16	89068600	89068772	(1269573)	C	MIR	SINE/MIR	(37)	225	43	1540764
50	24.0	0.6	4.8	chr17	1179471	1179636	(82077805)	+	(TCCCGA)n	Simple_repeat	1	167	(0)	1546511
2160	9.6	1.0	1.0	chr17	1704710	1705001	(81552440)	C	AluSc8	SINE/Alu	(19)	292	1	1547644
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
1913	9.8	1.8	0.0	chr17	4730911	4731186	(78526255)	+	AluSx1	SINE/Alu	15	295	(17)	1553636
13	28.0	0.0	2.0	chr17	7405165	7405213	(75852228)	+	G-rich	Low_complexity	1	49	(0)	1558789
18	5.5	10.5	0.0	chr17	8126628	8126665	(75130776)	+	G-rich	Low_complexity	1	42	(0)	1560138
4156	13.4	7.3	0.6	chr17	11908402	11909062	(71348379)	C	LTR62	LTR/ERVL	(0)	709	1	1567241
1192	13.5	0.0	2.9	chr17	11909063	11909172	(71348269)	C	L1MA5A	LINE/L1	(95)	6202	6094	1567240
3383	14.5	8.8	4.6	chr17	17417877	17418549	(65838892)	+	LTR62	LTR/ERVL	3	706	(3)	1576640
874	19.1	4.9	11.6	chr17	17418550	17418780	(65838661)	+	MLT1H	LTR/ERVL-MaLR	66	283	(266)	1576639
200	19.5	16.6	1.2	chr17	17663084	17663176	(65594265)	C	MIR1_Amn	SINE/MIR	(56)	152	45	1577101
196	30.7	4.3	0.0	chr17	18038688	18038775	(65218666)	+	MIR3	SINE/MIR	75	166	(42)	1577826
19	12.8	2.9	0.0	chr17	28527409	28527442	(54729999)	+	(GT)n	Simple_repeat	1	35	(0)	1588856
190	36.6	1.0	2.9	chr17	35734905	35735008	(47522433)	C	L2b	LINE/L2	(328)	3098	2997	1602694
29	14.9	0.0	7.7	chr17	36545398	36545475	(46711966)	+	(GGCG)n	Simple_repeat	1	78	(0)	1604134
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
229	17.5	0.0	0.0	chr17	37834174	37834213	(45423228)	C	L2c	LINE/L2	(226)	3161	3122	1606637
74	31.3	1.8	1.1	chr17	37834257	37834530	(45422911)	+	(CA)n	Simple_repeat	1	279	(0)	1606638
15	19.8	5.6	1.8	chr17	39667519	39667572	(43589869)	+	(CCTGCC)n	Simple_repeat	1	57	(0)	1610552
259	31.3	4.3	0.4	chr17	39903426	39903600	(43353841)	C	L1ME3B	LINE/L1	(5560)	682	464	1610964
322	31.3	6.9	1.2	chr17	40098568	40098726	(43158715)	+	MIR3	SINE/MIR	8	175	(87)	1611347
37	28.7	0.0	0.9	chr17	40104699	40104805	(43152636)	+	(TG)n	Simple_repeat	1	107	(0)	1611357
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
12	16.8	5.8	5.5	chr17	40536660	40536711	(42720730)	+	GA-rich	Low_complexity	1	55	(0)	1612266
2342	7.4	1.7	0.0	chr17	41528711	41529006	(41728435)	C	AluSz	SINE/Alu	(11)	301	1	1613756
2039	8.1	0.7	0.0	chr17	42561315	42561586	(40695855)	C	AluSp	SINE/Alu	(35)	278	5	1615898
197	16.9	7.1	2.6	chr17	42561692	42561760	(40695681)	+	MIR1_Amn	SINE/MIR	121	195	(73)	1615899
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
339	23.8	16.2	2.1	chr17	44266426	44266611	(38990830)	+	MIRb	SINE/MIR	7	219	(49)	1619566
208	24.7	6.1	3.8	chr17	44288574	44288653	(38968788)	+	L2b	LINE/L2	2482	2563	(856)	1619617
5141	12.3	2.1	2.5	chr17	44628816	44629655	(38627786)	+	LTR1A2	LTR/ERV1	1	837	(0)	1620371
4664	8.4	14.3	3.9	chr17	44795554	44796299	(38461142)	C	LTR1A2	LTR/ERV1	(0)	837	1	1620732
3495	5.4	3.4	0.0	chr17	46250325	46250752	(37006689)	+	MLT2A1	LTR/ERVL	1	443	(1)	1623695
489	15.3	0.0	0.0	chr17	46250753	46250824	(37006617)	+	AluJo	SINE/Alu	7	78	(234)	1623696
29	13.0	3.2	1.6	chr17	46250825	46250886	(37006555)	+	(CTTCTC)n	Simple_repeat	1	64	(0)	1623697
349	28.2	2.4	2.4	chr17	46250887	46251013	(37006428)	+	SVA_A	Retroposon/SVA	1	127	(1260)	1623698
390	25.5	1.1	0.0	chr17	46250923	46251016	(37006425)	C	AluJb	SINE/Alu	(1)	301	207	1623699
737	11.2	0.0	0.0	chr17	46251018	46251115	(37006326)	+	AluJo	SINE/Alu	202	299	(13)	1623700
113	5.0	2.7	0.7	chr17	46265247	46265394	(36992047)	+	(TTC)n	Simple_repeat	1	152	(0)	1623742
45	10.2	1.3	2.5	chr17	46265395	46265468	(36991973)	+	(TCC)n	Simple_repeat	2	75	(0)	1623743
2084	13.3	1.6	1.0	chr17	46265469	46265777	(36991664)	C	AluJb	SINE/Alu	(1)	311	1	1623744
2142	13.2	1.0	0.0	chr17	46779761	46780056	(36477385)	C	AluSz	SINE/Alu	(13)	299	1	1624700
34	0.0	0.0	0.0	chr17	46847968	46847996	(36409445)	+	(GT)n	Simple_repeat	1	29	(0)	1624839
53	2.0	0.0	0.0	chr17	47706829	47706878	(35550563)	+	(AC)n	Simple_repeat	1	50	(0)	1626590
567	31.7	14.6	3.9	chr17	48442580	48443218	(34814223)	+	L2c	LINE/L2	2483	3204	(183)	1627847
16	28.3	0.0	0.0	chr17	48548322	48548372	(34709069)	+	(TTTTT)n	Simple_repeat	1	51	(0)	1628083
12	17.5	0.0	5.6	chr17	48555184	48555219	(34702222)	+	GA-rich	Low_complexity	1	36	(0)	1628090
65	12.5	4.7	0.8	chr17	48555273	48555400	(34702041)	+	GA-rich	Low_complexity	1	134	(0)	1628090
18	19.6	0.0	0.0	chr17	48626377	48626411	(34631030)	+	(C)n	Simple_repeat	1	35	(0)	1628157
36	2.9	0.0	0.0	chr17	49241970	49242004	(34015437)	+	(AC)n	Simple_repeat	1	35	(0)	1629504
4677	9.0	0.0	1.6	chr17	49242060	49242704	(34014737)	C	LTR8	LTR/ERV1	(0)	691	57	1629505
501	21.6	0.0	1.1	chr17	50153599	50153710	(33103731)	+	MIR	SINE/MIR	10	120	(88)	1631244
14	12.7	0.0	0.0	chr17	50208846	50208871	(33048570)	+	(GACA)n	Simple_repeat	1	26	(0)	1631316
2313	10.5	0.0	0.0	chr17	50933329	50933624	(32323817)	+	AluSg	SINE/Alu	1	296	(14)	1632769
34	0.0	0.0	0.0	chr17	51166116	51166144	(32091297)	+	(TG)n	Simple_repeat	1	29	(0)	1633281
23	19.4	3.6	0.0	chr17	54861112	54861172	(28396269)	+	(TACATA)n	Simple_repeat	1	63	(0)	1638661
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
2077	11.9	0.0	0.0	chr17	59842843	59843145	(23414296)	C	AluSx1	SINE/Alu	(0)	312	5	1648069
517	18.1	0.0	1.2	chr17	59843641	59843723	(23413718)	+	AluJr	SINE/Alu	1	82	(230)	1648070
2192	8.6	3.6	0.3	chr17	59843731	59844022	(23413419)	+	AluSp	SINE/Alu	1	302	(11)	1648071
318	14.8	3.2	0.0	chr17	62143601	62143661	(21113780)	C	Alu	SINE/Alu	(0)	301	239	1652361
4052	10.4	1.9	2.1	chr17	62143664	62143828	(21113613)	+	MER61E	LTR/ERV1	1	161	(408)	1652362
2278	8.5	0.0	2.9	chr17	62143829	62144135	(21113306)	+	AluSg	SINE/Alu	1	298	(12)	1652363
2400	6.8	1.6	1.6	chr17	62173104	62173414	(21084027)	C	AluSp	SINE/Alu	(0)	313	3	1652432
3006	14.2	1.2	2.2	chr17	64406857	64407347	(18850094)	+	MER66B	LTR/ERV1	1	486	(0)	1656518
60	5.6	2.0	3.9	chr17	64458113	64458213	(18799228)	+	(TTCC)n	Simple_repeat	1	103	(0)	1656631
2173	12.9	1.3	0.3	chr17	64458214	64458512	(18798929)	C	AluSz6	SINE/Alu	(9)	303	1	1656632
243	23.2	6.8	0.8	chr17	67025956	67026806	(16230635)	+	(GT)n	Simple_repeat	1	909	(0)	1661264
75	29.9	0.4	0.9	chr17	67257681	67257909	(15999532)	+	(TG)n	Simple_repeat	1	230	(0)	1661618
594	33.0	6.5	3.1	chr17	68011257	68011406	(15246035)	C	L1M7	LINE/L1	(5873)	345	188	1663314
26	0.0	6.2	0.0	chr17	68011407	68011438	(15246003)	+	(TGT)n	Simple_repeat	1	34	(0)	1663315
2212	10.1	0.7	0.3	chr17	68011441	68011737	(15245704)	C	AluSx1	SINE/Alu	(14)	298	1	1663316
58	30.2	1.8	9.6	chr17	74514143	74514815	(8742626)	+	(TGACAGG)n	Simple_repeat	1	685	(0)	1674300
1988	12.0	0.0	9.4	chr17	75367873	75368213	(7889228)	C	AluSz6	SINE/Alu	(2)	310	2	1675964
2048	11.1	0.3	3.9	chr17	75368216	75368521	(7888920)	C	AluSg4	SINE/Alu	(14)	296	2	1675965
462	11.8	23.4	0.0	chr17	75775853	75775937	(7481504)	+	FLAM_C	SINE/Alu	17	127	(16)	1676748
2309	9.0	0.0	0.0	chr17	75775945	75776234	(7481207)	+	AluSc	SINE/Alu	2	291	(18)	1676749
1148	14.5	1.1	0.0	chr17	76601435	76601613	(6655828)	C	MER41A	LTR/ERV1	(0)	554	374	1678370
660	9.6	0.0	1.1	chr17	76601617	76601711	(6655730)	C	Alu	SINE/Alu	(178)	133	40	1678371
2818	13.1	3.6	0.0	chr17	76601713	76602163	(6655278)	C	MER41B	LTR/ERV1	(166)	468	1	1678372
1905	16.7	3.9	0.0	chr17	76913829	76914128	(6343313)	+	AluJb	SINE/Alu	1	312	(0)	1679025
20	17.8	0.0	0.0	chr17	76914129	76914168	(6343273)	+	GA-rich	Low_complexity	1	40	(0)	1679026
338	30.8	2.6	5.1	chr17	76914169	76914363	(6343078)	C	L2	LINE/L2	(1392)	2027	1838	1679024
14	17.7	2.5	2.4	chr17	77279803	77279842	(5977599)	+	G-rich	Low_complexity	1	41	(0)	1679794
206	27.1	0.2	0.2	chr17	77809785	77810280	(5447161)	+	(TGATGA)n	Simple_repeat	1	497	(0)	1680683
11	12.8	8.8	0.0	chr17	78272988	78273021	(4984420)	+	(AGGAATG)n	Simple_repeat	1	37	(0)	1681539
102	18.5	2.8	0.0	chr17	78290011	78290224	(4967217)	+	(GT)n	Simple_repeat	1	220	(0)	1681578
17	7.3	3.5	0.0	chr17	78315835	78315863	(4941578)	+	(CCT)n	Simple_repeat	1	30	(0)	1681637
214	31.2	7.4	1.8	chr17	78316046	78316159	(4941282)	C	L2a	LINE/L2	(20)	3355	3235	1681636
88	18.3	0.5	3.9	chr17	80254220	80254423	(3003018)	+	(CCTT)n	Simple_repeat	1	205	(0)	1684748
1270	16.2	1.9	0.9	chr17	80254452	80254661	(3002780)	C	AluJo	SINE/Alu	(100)	212	1	1684749
114	26.6	2.4	1.8	chr17	80497450	80497560	(2759881)	+	(GT)n	Simple_repeat	1	109	(0)	1685101
1715	17.0	3.4	2.1	chr17	80497561	80497849	(2759592)	+	AluJo	SINE/Alu	1	293	(19)	1685102
268	18.5	6.7	2.0	chr17	80511054	80511848	(2745593)	+	(CA)n	Simple_repeat	1	848	(0)	1685123
2252	11.4	0.0	1.3	chr17	80988481	80988786	(2268655)	+	AluSx1	SINE/Alu	3	304	(8)	1685746
541	24.4	1.0	14.5	chr17	80988787	80988884	(2268557)	C	MER58C	DNA/hAT-Charlie	(31)	184	105	1685745
49	0.0	0.0	0.0	chr17	80988885	80988926	(2268515)	+	(GT)n	Simple_repeat	1	42	(0)	1685747
541	24.4	1.0	14.5	chr17	80988927	80989032	(2268409)	C	MER58C	DNA/hAT-Charlie	(111)	104	1	1685745
885	15.9	7.2	1.2	chr17	81507712	81507965	(1749476)	C	L1M4	LINE/L1	(684)	5496	5232	1686347
1112	16.1	1.4	7.1	chr17	81507980	81508165	(1749276)	C	AluJr	SINE/Alu	(13)	299	126	1686348
12	13.9	0.0	0.0	chr17	81960867	81960890	(1296551)	+	(GCA)n	Simple_repeat	1	24	(0)	1686968
1685	7.4	2.8	0.0	chr17	82367747	82367988	(889453)	C	LTR71B	LTR/ERV1	(0)	610	362	1687533
603	13.1	0.0	0.0	chr17	82367985	82368083	(889358)	C	LTR71B	LTR/ERV1	(150)	460	362	1687534
3098	7.6	2.0	0.0	chr17	82368081	82368530	(888911)	C	LTR71B	LTR/ERV1	(151)	459	1	1687535
17	25.5	5.9	6.2	chr17	82387926	82388078	(869363)	+	G-rich	Low_complexity	1	162	(0)	1687560
447	28.2	4.7	1.2	chr18	711298	711507	(79661778)	C	L1ME3C	LINE/L1	(47)	6195	5974	1690296
12	22.1	0.0	0.0	chr18	712651	712682	(79660603)	+	GA-rich	Low_complexity	1	32	(0)	1690298
2455	5.5	0.7	0.0	chr18	3038341	3038632	(77334653)	+	AluY	SINE/Alu	1	294	(17)	1693657
1819	15.4	0.0	3.4	chr18	3038635	3038926	(77334359)	C	AluJb	SINE/Alu	(30)	282	1	1693658
85	26.0	3.3	4.7	chr18	3583108	3583143	(76790142)	+	(TTCC)n	Simple_repeat	2	35	(0)	1694690
48	0.0	0.0	0.0	chr18	3583144	3583187	(76790098)	+	(ACCT)n	Simple_repeat	1	44	(0)	1694691
85	26.0	3.3	4.7	chr18	3583188	3583447	(76789838)	+	(TTCC)n	Simple_repeat	1	256	(0)	1694692
56	0.0	0.0	0.0	chr18	6676183	6676230	(73697055)	+	(CA)n	Simple_repeat	1	48	(0)	1698892
93	15.4	0.9	5.7	chr18	6920265	6920489	(73452796)	+	(GGTGGT)n	Simple_repeat	1	227	(0)	1699241
20968	7.0	1.1	2.1	chr18	8877339	8881515	(71491770)	C	HERVIP10FH-int	LTR/ERV1	(2)	7735	687	1702053
3444	9.6	2.5	5.3	chr18	8882794	8883319	(71489966)	C	LTR10F	LTR/ERV1	(0)	511	1	1702053
3390	9.7	2.1	0.0	chr18	11925665	11926139	(68447146)	C	LTR19A	LTR/ERV1	(1)	485	1	1706590
1782	17.0	0.7	1.4	chr18	12897234	12897516	(67475769)	C	AluJb	SINE/Alu	(31)	281	1	1708330
2256	11.6	0.0	0.0	chr18	12897574	12897866	(67475419)	+	AluSx1	SINE/Alu	1	293	(19)	1708331
15	4.8	0.0	0.0	chr18	12948064	12948085	(67425200)	+	(CGC)n	Simple_repeat	1	22	(0)	1708433
1931	17.7	0.0	0.0	chr18	23049226	23049524	(57323761)	+	AluJb	SINE/Alu	2	300	(12)	1715480
1798	14.1	0.0	9.2	chr18	23049525	23049695	(57323590)	+	AluJr	SINE/Alu	134	296	(16)	1715479
15	8.0	3.7	0.0	chr18	23049696	23049722	(57323563)	+	(GGA)n	Simple_repeat	1	28	(0)	1715481
239	34.9	13.5	1.1	chr18	23500777	23501222	(56872063)	C	L2	LINE/L2	(1953)	1466	957	1716337
2256	10.9	0.0	1.0	chr18	31949617	31949928	(48423357)	C	AluSx3	SINE/Alu	(2)	309	1	1728497
2219	10.7	0.3	0.7	chr18	31949929	31950061	(48423224)	C	AluSc8	SINE/Alu	(178)	133	1	1728496
4201	10.0	7.9	10.8	chr18	31950062	31950334	(48422951)	C	MER4E1	LTR/ERV1	(507)	274	1	1728492
885	24.5	12.1	2.4	chr18	34972934	34973230	(45400055)	+	MLT1I	LTR/ERVL-MaLR	82	411	(0)	1732679
12	13.7	0.0	0.0	chr18	35948409	35948432	(44424853)	+	(TTGG)n	Simple_repeat	1	24	(0)	1734020
2413	9.0	0.0	0.7	chr18	35948434	35948722	(44424563)	C	AluSc	SINE/Alu	(22)	287	1	1734021
13	20.2	9.4	1.4	chr18	37326236	37326299	(43046986)	+	(GAGCCAG)n	Simple_repeat	1	70	(0)	1735893
68	3.4	0.0	4.0	chr18	41936769	41936867	(38436418)	+	(AGGA)n	Simple_repeat	1	99	(0)	1742094
2595	19.1	0.7	0.2	chr18	41944926	41945381	(38427904)	+	MLT1C	LTR/ERVL-MaLR	10	467	(0)	1742113
265	27.4	5.1	13.9	chr18	41945434	41945649	(38427636)	+	L2c	LINE/L2	3047	3242	(145)	1742114
5229	12.8	3.0	1.5	chr18	51123625	51124448	(29248837)	C	LTR1A2	LTR/ERV1	(0)	837	1	1756386
1745	11.8	1.1	3.3	chr18	51124449	51124617	(29248668)	C	AluJo	SINE/Alu	(119)	193	28	1756385
32	10.8	0.0	0.0	chr18	55096557	55096606	(25276679)	+	(TC)n	Simple_repeat	1	50	(0)	1762215
43	4.5	0.0	0.0	chr18	55096612	55096657	(25276628)	+	(CA)n	Simple_repeat	1	46	(0)	1762216
385	37.4	14.3	2.6	chr18	70025665	70026255	(10347030)	+	L2	LINE/L2	1471	2156	(1263)	1783995
2061	10.4	4.0	1.7	chr18	77991869	77992165	(2381120)	C	AluSz	SINE/Alu	(8)	304	1	1794141
126	29.1	3.2	0.6	chr19	544737	545138	(58072478)	+	(ATCC)n	Simple_repeat	4	415	(0)	1797111
1234	29.8	2.9	0.6	chr19	834189	834661	(57782955)	C	L1MB5	LINE/L1	(46)	6128	5645	1797707
199	16.8	3.5	2.4	chr19	1180840	1181083	(57436533)	+	(TCTGTC)n	Simple_repeat	1	242	(0)	1798339
2525	3.1	0.0	0.0	chr19	1194867	1195189	(57422427)	C	AluYb8	SINE/Alu	(0)	318	1	1798384
2135	14.7	0.0	0.0	chr19	1202819	1203117	(57414499)	+	AluSx	SINE/Alu	1	299	(13)	1798403
11	17.5	1.9	9.1	chr19	1208019	1208072	(57409544)	+	(CTGCC)n	Simple_repeat	1	55	(0)	1798411
2034	10.5	0.0	0.0	chr19	1443080	1443345	(57174271)	C	AluSx	SINE/Alu	(15)	297	32	1798786
287	4.0	7.4	0.0	chr19	1443348	1443397	(57174219)	+	Alu	SINE/Alu	248	301	(0)	1798787
1880	12.0	5.5	0.0	chr19	1546488	1546763	(57070853)	C	AluSp	SINE/Alu	(21)	292	1	1798991
511	23.9	1.2	0.6	chr19	1704307	1704722	(56912894)	+	(ATGG)n	Simple_repeat	1	423	(0)	1799343
1634	17.4	13.7	6.5	chr19	1704723	1704811	(56912805)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	361	1799344
511	12.2	0.0	2.5	chr19	1725298	1725408	(56892208)	C	FLAM_C	SINE/Alu	(178)	124	23	1799396
35	30.5	2.5	3.1	chr19	1826378	1826536	(56791080)	+	G-rich	Low_complexity	1	163	(0)	1799583
327	27.6	5.8	3.9	chr19	2345958	2346059	(56271557)	C	L1MEd	LINE/L1	(5011)	2075	1972	1800587
337	34.4	11.0	2.4	chr19	2785868	2786206	(55831410)	C	L2a	LINE/L2	(1)	3425	3054	1801656
2682	2.9	0.7	0.3	chr19	2900006	2900314	(55717302)	+	AluY	SINE/Alu	1	310	(1)	1801886
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
2064	10.0	3.0	4.8	chr19	3039074	3039244	(55578372)	+	AluSq2	SINE/Alu	137	303	(10)	1802234
492	23.9	15.1	5.2	chr19	3039245	3039543	(55578073)	+	L2b	LINE/L2	2821	3157	(218)	1802233
688	22.5	0.9	0.7	chr19	3153278	3154797	(55462819)	+	(GATG)n	Simple_repeat	1	1534	(0)	1802521
1400	18.1	0.8	0.8	chr19	3266108	3266369	(55351247)	C	MER66B	LTR/ERV1	(224)	262	1	1802790
427	16.2	1.2	0.0	chr19	3266370	3266449	(55351167)	+	AluJb	SINE/Alu	230	310	(2)	1802789
521	30.4	7.2	0.0	chr19	3266458	3266664	(55350952)	C	L1ME3	LINE/L1	(304)	5858	5636	1802785
46	0.0	0.0	0.0	chr19	3314381	3314419	(55303197)	+	(CA)n	Simple_repeat	1	39	(0)	1802907
56	4.3	4.2	0.0	chr19	3314510	3314581	(55303035)	+	(CT)n	Simple_repeat	1	75	(0)	1802908
272	35.0	10.1	4.3	chr19	3324348	3324580	(55293036)	C	MIRb	SINE/MIR	(8)	260	13	1802933
1027	27.5	4.9	2.4	chr19	3324536	3324991	(55292625)	+	L2b	LINE/L2	2749	3217	(158)	1802934
130	29.7	2.1	2.4	chr19	3368949	3369416	(55248200)	+	(TCTCTC)n	Simple_repeat	1	467	(0)	1803077
123	21.5	2.8	0.0	chr19	3370477	3370763	(55246853)	+	(TCTC)n	Simple_repeat	1	295	(0)	1803081
2343	8.8	0.7	0.7	chr19	3565001	3565307	(55052309)	C	AluSx1	SINE/Alu	(5)	307	1	1803541
684	27.0	0.5	2.4	chr19	3565323	3565527	(55052089)	C	MER49	LTR/ERV1	(637)	286	86	1803542
2242	11.1	0.0	0.7	chr19	3565531	3565837	(55051779)	C	AluSx	SINE/Alu	(7)	305	1	1803543
1021	27.6	9.7	3.8	chr19	4139518	4140150	(54477466)	C	L2a	LINE/L2	(238)	3188	2499	1804841
1311	27.2	9.3	1.2	chr19	4233349	4233922	(54383694)	+	L2a	LINE/L2	2573	3186	(240)	1805107
2153	12.5	0.3	0.0	chr19	4399039	4399342	(54218274)	+	AluSz	SINE/Alu	1	305	(7)	1805506
53	12.8	1.8	4.3	chr19	4399384	4399497	(54218119)	+	GA-rich	Low_complexity	1	116	(0)	1805507
730	22.0	4.3	2.2	chr19	4399507	4399687	(54217929)	+	MER20	DNA/hAT-Charlie	35	219	(0)	1805508
817	26.3	6.6	1.2	chr19	4557686	4558016	(54059600)	+	L2	LINE/L2	2658	3007	(412)	1805855
1287	26.9	8.8	1.8	chr19	4576003	4576774	(54040842)	+	L2a	LINE/L2	2584	3419	(7)	1805910
317	36.3	4.5	6.8	chr19	4577162	4577454	(54040162)	+	L2b	LINE/L2	3088	3373	(2)	1805912
1070	28.1	2.0	0.3	chr19	4633083	4633448	(53984168)	C	L2a	LINE/L2	(319)	3107	2736	1806060
249	27.3	6.1	5.4	chr19	4633392	4633538	(53984078)	+	MIR3	SINE/MIR	8	155	(53)	1806072
1616	28.9	11.2	5.9	chr19	4730736	4731314	(53886302)	+	L2a	LINE/L2	2643	3224	(202)	1806282
826	18.5	0.0	0.7	chr19	4743613	4743747	(53873869)	+	AluJr4	SINE/Alu	6	139	(173)	1806328
1040	23.4	5.8	0.4	chr19	5170244	5170722	(53446894)	C	L2a	LINE/L2	(254)	3172	2659	1807269
2194	8.4	0.0	0.4	chr19	5170757	5171031	(53446585)	+	AluSx1	SINE/Alu	1	274	(38)	1807271
216	22.3	0.4	0.6	chr19	5681430	5681899	(52935717)	+	(CCAT)n	Simple_repeat	1	472	(0)	1808577
18	11.7	0.0	0.0	chr19	5798385	5798412	(52819204)	+	(TC)n	Simple_repeat	1	28	(0)	1808875
43	6.7	3.1	0.0	chr19	5798420	5798483	(52819133)	+	(TCCT)n	Simple_repeat	1	66	(0)	1808876
2246	12.8	0.0	0.3	chr19	5798484	5798795	(52818821)	C	AluSx1	SINE/Alu	(1)	311	1	1808877
60	0.0	0.0	0.0	chr19	6166281	6166331	(52451285)	+	(TG)n	Simple_repeat	1	51	(0)	1809599
2259	8.2	1.4	0.0	chr19	6166332	6166612	(52451004)	C	AluSx1	SINE/Alu	(27)	285	1	1809600
2334	7.6	0.0	1.0	chr19	6371910	6372210	(52245406)	C	AluSx	SINE/Alu	(14)	298	1	1810085
655	23.1	6.2	7.6	chr19	6372211	6372265	(52245351)	C	L1MC5	LINE/L1	(230)	9074	9015	1810084
260	20.9	4.5	5.4	chr19	6530257	6530479	(52087137)	+	HERVIP10FH-int	LTR/ERV1	778	998	(4104)	1810497
50	18.0	6.4	2.4	chr19	6530484	6530640	(52086976)	+	(AGACAG)n	Simple_repeat	1	167	(0)	1810498
171	22.6	0.0	0.0	chr19	6532267	6532635	(52084981)	+	(GTGTGT)n	Simple_repeat	1	369	(0)	1810500
192	13.4	3.3	3.5	chr19	6717444	6717863	(51899753)	+	(GTGTGTT)n	Simple_repeat	1	434	(0)	1810986
33	8.1	4.3	2.7	chr19	6717893	6717962	(51899654)	+	(TG)n	Simple_repeat	1	73	(0)	1810987
12	33.2	0.0	3.0	chr19	6717980	6718046	(51899570)	+	(TCTCTG)n	Simple_repeat	1	67	(0)	1810988
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
1825	15.6	1.8	0.0	chr19	7359874	7360143	(51257473)	+	AluSx	SINE/Alu	2	276	(36)	1812742
13	26.6	2.9	4.3	chr19	7904129	7904196	(50713420)	+	(GCCCC)n	Simple_repeat	1	70	(0)	1813953
3817	11.9	1.4	6.8	chr19	8033232	8033694	(50583922)	C	LTR19B	LTR/ERV1	(140)	440	1	1814222
913	11.7	1.9	7.2	chr19	8033696	8033861	(50583755)	C	HERVFH19-int	LTR/ERV1	(1)	7718	7562	1814222
2490	7.9	0.0	0.0	chr19	8033898	8034200	(50583416)	C	AluY	SINE/Alu	(8)	303	1	1814224
248	22.5	4.1	0.8	chr19	8371610	8371706	(50245910)	+	MIRc	SINE/MIR	52	149	(81)	1815164
2446	8.0	0.0	1.0	chr19	8371744	8372057	(50245559)	C	AluY	SINE/Alu	(0)	311	1	1815165
2201	12.9	0.7	0.7	chr19	9923274	9923583	(48694033)	+	AluSz	SINE/Alu	2	311	(1)	1818457
57	10.4	1.7	6.2	chr19	9923584	9923704	(48693912)	+	A-rich	Low_complexity	1	115	(0)	1818458
1116	14.0	10.8	7.8	chr19	9923705	9923818	(48693798)	C	AluJo	SINE/Alu	(61)	251	126	1818459
26	9.3	0.0	2.1	chr19	10010012	10010059	(48607557)	+	(ATGCACACAC)n	Simple_repeat	1	48	(0)	1818679
1772	16.7	2.8	0.4	chr19	10076280	10076560	(48541056)	+	AluJb	SINE/Alu	3	290	(22)	1818838
55	9.7	5.7	3.9	chr19	10076640	10076762	(48540854)	+	GA-rich	Low_complexity	1	130	(0)	1818839
1415	19.7	7.3	1.5	chr19	10076815	10077235	(48540381)	C	L1M4	LINE/L1	(2521)	3625	3177	1818830
275	34.1	5.7	2.3	chr19	10431109	10431279	(48186337)	+	MIRc	SINE/MIR	53	229	(39)	1819722
200	30.6	2.7	0.6	chr19	10431372	10431465	(48186151)	+	MIRc	SINE/MIR	93	189	(79)	1819723
1650	14.9	3.1	4.5	chr19	10515646	10515934	(48101682)	+	AluJb	SINE/Alu	1	285	(27)	1819955
38	27.5	3.2	2.5	chr19	10515935	10516073	(48101543)	+	(CA)n	Simple_repeat	2	140	(0)	1819956
2094	14.2	1.6	0.3	chr19	11139654	11139956	(47477660)	C	AluSz	SINE/Alu	(0)	312	6	1821548
23	30.3	1.6	4.8	chr19	11139957	11139987	(47477629)	+	(TTTC)n	Simple_repeat	3	31	(0)	1821549
37	2.1	4.0	1.9	chr19	11139988	11140037	(47477579)	+	(TTCC)n	Simple_repeat	1	52	(0)	1821550
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
12	16.4	7.8	3.6	chr19	11578557	11578607	(47039009)	+	(CCTG)n	Simple_repeat	1	55	(0)	1822701
1195	12.4	3.6	1.6	chr19	12890415	12890586	(45727030)	+	AluJo	SINE/Alu	134	312	(0)	1825458
54	5.2	0.0	0.0	chr19	12890616	12890675	(45726941)	+	(CA)n	Simple_repeat	1	60	(0)	1825460
1383	11.8	4.5	14.5	chr19	12919616	12919786	(45697830)	C	AluJb	SINE/Alu	(15)	297	131	1825530
18	14.7	0.0	0.0	chr19	13023167	13023196	(45594420)	+	(GA)n	Simple_repeat	1	30	(0)	1825768
18	12.2	0.0	0.0	chr19	13023241	13023267	(45594349)	+	(CA)n	Simple_repeat	1	27	(0)	1825769
29	23.1	1.2	2.3	chr19	13023271	13023355	(45594261)	+	(CCCT)n	Simple_repeat	1	86	(0)	1825770
232	3.5	0.0	0.0	chr19	13155390	13155418	(45462198)	+	MIRc	SINE/MIR	120	148	(120)	1825988
1700	24.4	6.5	5.0	chr19	13318248	13318873	(45298743)	C	L2a	LINE/L2	(345)	3074	2439	1826422
12	21.6	0.0	0.0	chr19	14136479	14136510	(44481106)	+	G-rich	Low_complexity	1	32	(0)	1828671
130	28.3	3.7	1.0	chr19	14384673	14384958	(44232658)	+	(TC)n	Simple_repeat	1	333	(15)	1829366
21	16.3	0.0	0.0	chr19	14384959	14384997	(44232619)	+	(T)n	Simple_repeat	1	39	(0)	1829367
130	28.3	3.7	1.0	chr19	14384998	14385008	(44232608)	+	(TC)n	Simple_repeat	334	348	(0)	1829366
2298	9.9	1.3	0.3	chr19	14385009	14385311	(44232305)	C	AluSx	SINE/Alu	(6)	306	1	1829368
3565	5.0	1.7	3.5	chr19	15835691	15836170	(42781446)	+	LTR7C	LTR/ERV1	1	471	(0)	1832599
969	11.2	1.4	2.2	chr19	16874270	16875902	(41741714)	+	(CTGGT)n	Simple_repeat	1	1655	(0)	1835001
2325	6.5	0.0	1.0	chr19	17308673	17308966	(41308650)	C	AluY	SINE/Alu	(19)	292	2	1835997
1957	7.2	12.0	0.0	chr19	17308971	17309234	(41308382)	C	AluSq2	SINE/Alu	(13)	300	1	1835998
24	28.9	0.0	0.0	chr19	17309575	17309645	(41307971)	+	(GGC)n	Simple_repeat	1	71	(0)	1835999
1078	8.7	0.0	0.0	chr19	17394822	17394959	(41222657)	C	FLAM_C	SINE/Alu	(5)	138	1	1836216
33	25.9	1.0	2.0	chr19	17395197	17395295	(41222321)	+	(CTCCTC)n	Simple_repeat	1	100	(0)	1836217
2225	13.8	0.0	0.0	chr19	17518519	17518830	(41098786)	C	AluSx1	SINE/Alu	(0)	312	1	1836572
619	23.3	7.4	5.2	chr19	17518857	17519028	(41098588)	+	AluJo	SINE/Alu	120	295	(17)	1836573
1125	14.0	0.6	0.0	chr19	17763103	17763259	(40854357)	C	AluJo	SINE/Alu	(18)	294	137	1837216
2299	12.2	0.0	0.0	chr19	17763260	17763563	(40854053)	C	AluSq2	SINE/Alu	(9)	304	1	1837217
379	24.2	6.9	7.5	chr19	18063565	18063738	(40553878)	C	L2c	LINE/L2	(224)	3163	2991	1837983
2340	9.1	0.0	0.3	chr19	18064477	18064772	(40552844)	C	AluSx1	SINE/Alu	(16)	296	2	1837985
268	28.2	2.5	4.9	chr19	18064773	18064802	(40552814)	+	MIR1_Amn	SINE/MIR	80	110	(120)	1837986
2502	17.5	7.0	0.4	chr19	18064803	18065256	(40552360)	+	MER66B	LTR/ERV1	1	486	(0)	1837987
16	13.4	0.0	2.9	chr19	18280050	18280084	(40337532)	+	A-rich	Low_complexity	1	35	(0)	1838526
31	11.4	0.0	0.0	chr19	18415571	18415619	(40201997)	+	(GGA)n	Simple_repeat	1	49	(0)	1838862
254	38.0	0.0	0.0	chr19	18415660	18415772	(40201844)	C	L2a	LINE/L2	(308)	3118	3006	1838863
16	24.2	1.8	1.8	chr19	18895318	18895372	(39722244)	+	G-rich	Low_complexity	1	56	(0)	1839788
207	27.3	3.8	2.5	chr19	21852189	21852267	(36765349)	C	MIRc	SINE/MIR	(122)	146	67	1844652
420	22.5	6.2	0.8	chr19	32675569	32675689	(25941927)	+	MIR3	SINE/MIR	27	154	(54)	1855283
854	32.0	11.4	3.0	chr19	34962755	34963409	(23654207)	+	L2	LINE/L2	2366	3082	(337)	1859399
21	21.4	1.3	6.2	chr19	35041244	35041322	(23576294)	+	G-rich	Low_complexity	1	80	(0)	1859572
282	23.8	7.0	0.0	chr19	35105210	35105289	(23512327)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	326	1859732
234	33.3	0.9	0.1	chr19	35105327	35106078	(23511538)	+	(CAC)n	Simple_repeat	1	759	(0)	1859733
115	25.7	3.8	1.9	chr19	35562774	35563184	(23054432)	+	(TCTC)n	Simple_repeat	1	418	(0)	1860656
2360	10.1	0.3	1.9	chr19	38317563	38317879	(20299737)	C	AluSx	SINE/Alu	(0)	312	1	1866383
106	34.9	2.1	2.7	chr19	38800725	38801334	(19816282)	+	(GATG)n	Simple_repeat	1	623	(0)	1867476
876	24.5	1.9	4.0	chr19	38882763	38883069	(19734547)	+	LTR82A	LTR/ERVL	10	297	(533)	1867661
2443	8.5	0.0	2.5	chr19	38883070	38883388	(19734228)	C	AluSq2	SINE/Alu	(2)	311	1	1867662
6192	16.0	2.8	1.3	chr19	38979964	38980181	(19637435)	+	LTR28C	LTR/ERV1	1	219	(910)	1867902
2307	10.1	0.0	0.0	chr19	38980182	38980489	(19637127)	C	AluSx1	SINE/Alu	(4)	308	1	1867903
64	30.8	2.6	1.8	chr19	39197363	39197584	(19420032)	+	(TC)n	Simple_repeat	1	222	(0)	1868508
1639	11.7	0.9	2.2	chr19	39197585	39197814	(19419802)	C	AluSx	SINE/Alu	(18)	294	68	1868509
757	26.2	0.0	3.7	chr19	39546544	39546713	(19070903)	+	MLT1H	LTR/ERVL-MaLR	8	174	(381)	1869315
2060	16.2	8.4	0.7	chr19	39546714	39547161	(19070455)	+	MER66B	LTR/ERV1	1	486	(0)	1869321
57	24.5	4.6	1.0	chr19	39878439	39878633	(18738983)	+	(TCTC)n	Simple_repeat	1	204	(0)	1869809
59	26.4	3.4	1.4	chr19	39894698	39894905	(18722711)	+	(TCTC)n	Simple_repeat	1	215	(0)	1869845
681	28.0	3.9	5.2	chr19	40272786	40273054	(18344562)	+	MIR	SINE/MIR	2	261	(1)	1870625
2301	9.5	0.3	0.0	chr19	40273062	40273356	(18344260)	+	AluSg	SINE/Alu	1	296	(14)	1870626
33	25.9	5.2	2.5	chr19	40614100	40614253	(18003363)	+	(CTCCT)n	Simple_repeat	1	162	(0)	1871515
1448	15.2	11.6	0.7	chr19	40639426	40639694	(17977922)	C	AluJb	SINE/Alu	(10)	302	1	1871584
913	25.6	4.8	5.1	chr19	40639695	40639924	(17977692)	+	L2a	LINE/L2	2863	3091	(335)	1871572
402	27.6	8.7	2.9	chr19	40663937	40664141	(17953475)	C	L2b	LINE/L2	(23)	3352	3135	1871652
36	28.6	2.5	3.7	chr19	40689350	40689507	(17928109)	+	(CA)n	Simple_repeat	1	162	(0)	1871709
17	30.2	0.0	1.8	chr19	41225808	41225862	(17391754)	+	(TG)n	Simple_repeat	1	55	(0)	1872925
2599	5.8	0.0	0.0	chr19	41262758	41263068	(17354548)	+	AluSq	SINE/Alu	1	311	(2)	1873026
27	0.0	0.0	3.3	chr19	41325557	41325586	(17292030)	+	(CTCC)n	Simple_repeat	1	30	(0)	1873155
14	20.8	1.6	7.7	chr19	41350889	41350952	(17266664)	+	G-rich	Low_complexity	1	65	(0)	1873222
18	23.3	5.2	1.6	chr19	42283181	42283238	(16334378)	+	(TG)n	Simple_repeat	1	61	(0)	1874955
12	8.4	0.0	6.9	chr19	43774647	43774675	(14842941)	+	(GGTCA)n	Simple_repeat	1	29	(0)	1877645
240	32.2	5.9	0.0	chr19	44682845	44682987	(13934629)	C	MIR3	SINE/MIR	(54)	154	3	1879323
34	0.0	0.0	0.0	chr19	44683056	44683084	(13934532)	+	(CT)n	Simple_repeat	1	29	(0)	1879324
11	25.1	2.2	2.2	chr19	44753586	44753630	(13863986)	+	(ACCGGC)n	Simple_repeat	1	46	(0)	1879532
56	25.0	4.0	1.1	chr19	44848657	44848829	(13768787)	+	(CT)n	Simple_repeat	1	180	(0)	1879792
833	26.2	0.6	0.0	chr19	45313880	45314043	(13303573)	+	FRAM	SINE/Alu	1	165	(11)	1880977
81	10.4	0.7	4.6	chr19	45314044	45314194	(13303422)	+	GA-rich	Low_complexity	1	152	(0)	1880978
1184	15.2	3.4	1.3	chr19	45314195	45314421	(13303195)	+	Tigger1	DNA/TcMar-Tigger	2078	2309	(109)	1880979
615	22.7	3.9	3.9	chr19	45326209	45326387	(13291229)	+	MLT1N2	LTR/ERVL-MaLR	17	195	(367)	1881010
265	24.5	2.0	12.5	chr19	45326711	45326765	(13290851)	C	LTR67B	LTR/ERVL	(16)	604	555	1881011
373	32.5	1.9	5.0	chr19	45442449	45442607	(13175009)	C	MIRb	SINE/MIR	(15)	253	100	1881329
47	26.9	5.2	4.9	chr19	45668352	45668659	(12948957)	+	(GTCTCT)n	Simple_repeat	1	324	(0)	1881954
11	18.1	6.3	6.0	chr19	45876293	45876355	(12741261)	+	(TCTGTG)n	Simple_repeat	1	67	(0)	1882472
1970	11.7	0.0	14.5	chr19	45888946	45889148	(12728468)	+	AluSx	SINE/Alu	127	302	(0)	1882491
237	21.9	21.3	1.3	chr19	45889184	45889302	(12728314)	C	MIRc	SINE/MIR	(108)	160	20	1882494
1993	16.7	0.6	1.0	chr19	45889425	45889736	(12727880)	+	AluJo	SINE/Alu	2	312	(0)	1882495
2333	9.2	0.6	1.3	chr19	46810228	46810541	(11807075)	C	AluSp	SINE/Alu	(1)	312	1	1884616
2366	10.2	0.3	0.0	chr19	46810556	46810860	(11806756)	C	AluSz	SINE/Alu	(0)	312	7	1884617
2409	4.4	0.3	5.7	chr19	46810865	46811182	(11806434)	C	AluY	SINE/Alu	(9)	302	2	1884618
935	23.4	8.3	6.5	chr19	46818704	46819179	(11798437)	C	MER51A	LTR/ERV1	(61)	573	1	1884644
2267	8.7	2.4	0.0	chr19	46843916	46844202	(11773414)	C	AluSg	SINE/Alu	(16)	294	1	1884722
664	25.6	9.5	3.3	chr19	46844212	46844511	(11773105)	+	L2a	LINE/L2	2843	3180	(246)	1884719
1900	16.7	1.6	0.3	chr19	47047569	47047874	(11569742)	+	AluJo	SINE/Alu	1	310	(2)	1885143
64	2.4	6.9	0.0	chr19	47048969	47049055	(11568561)	+	(TCTT)n	Simple_repeat	1	93	(0)	1885144
25	7.9	0.0	4.4	chr19	47049057	47049101	(11568515)	+	(TCCC)n	Simple_repeat	1	45	(0)	1885145
2415	8.9	0.0	0.0	chr19	47049102	47049404	(11568212)	C	AluSz	SINE/Alu	(9)	303	1	1885146
20	23.6	2.9	4.2	chr19	47241456	47241525	(11376091)	+	(TG)n	Simple_repeat	1	72	(0)	1885628
13	17.1	11.5	3.5	chr19	47241691	47241768	(11375848)	+	(TGTGC)n	Simple_repeat	1	87	(0)	1885629
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
2337	11.8	0.0	0.0	chr19	47262211	47262516	(11355100)	C	AluSz6	SINE/Alu	(6)	306	1	1885691
428	28.4	4.8	5.3	chr19	47262517	47262752	(11354864)	C	MLT1J	LTR/ERVL-MaLR	(161)	287	70	1885690
2081	9.8	0.3	1.4	chr19	47312979	47313274	(11304342)	C	AluSg	SINE/Alu	(16)	294	2	1885838
14	16.1	10.5	1.6	chr19	47713361	47713368	(10904248)	+	(CGTCC)n	Simple_repeat	1	22	(41)	1886851
15	18.4	2.7	0.0	chr19	47713369	47713405	(10904211)	+	(CCCT)n	Simple_repeat	1	38	(0)	1886852
14	16.1	10.5	1.6	chr19	47713406	47713417	(10904199)	+	(CGTCC)n	Simple_repeat	23	63	(0)	1886851
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
2350	8.0	0.3	0.7	chr19	48399286	48399585	(10218031)	+	AluSx1	SINE/Alu	3	301	(11)	1888661
312	21.4	1.4	0.3	chr19	48548166	48548854	(10068762)	+	(TGGA)n	Simple_repeat	1	699	(0)	1889028
1415	26.7	11.0	2.6	chr19	48588604	48589545	(10028071)	C	L2a	LINE/L2	(133)	3293	2253	1889155
2020	13.5	0.3	2.0	chr19	48633819	48634122	(9983494)	+	AluSx1	SINE/Alu	1	299	(13)	1889248
294	27.2	6.4	0.0	chr19	48634137	48634239	(9983377)	C	MIR3	SINE/MIR	(25)	183	74	1889249
300	0.0	0.0	0.0	chr19	48634251	48634286	(9983330)	C	U2	snRNA	(152)	36	1	1889250
18	11.7	8.0	3.7	chr19	48645813	48645862	(9971754)	+	(CT)n	Simple_repeat	1	54	(0)	1889271
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
64	28.7	3.2	1.6	chr19	48868148	48868393	(9749223)	+	(TC)n	Simple_repeat	1	254	(0)	1889821
404	20.0	0.8	6.4	chr19	48868422	48868672	(9748944)	C	HERVIP10FH-int	LTR/ERV1	(4122)	980	744	1889822
2111	12.9	0.0	1.6	chr19	48874919	48875229	(9742387)	C	AluSz6	SINE/Alu	(5)	307	2	1889839
2143	12.0	1.3	1.0	chr19	48878238	48878538	(9739078)	C	AluSz	SINE/Alu	(4)	308	7	1889844
3556	14.0	3.9	3.4	chr19	48878539	48878917	(9738699)	C	MER41E	LTR/ERV1	(229)	366	1	1889843
775	14.5	0.0	3.1	chr19	48967917	48968044	(9649572)	+	FLAM_C	SINE/Alu	5	128	(5)	1890083
26	11.2	0.0	0.0	chr19	49021405	49021443	(9596173)	+	(GA)n	Simple_repeat	1	39	(0)	1890205
21	7.6	0.0	0.0	chr19	49021443	49021470	(9596146)	+	(GT)n	Simple_repeat	1	28	(0)	1890206
25	8.3	0.0	0.0	chr19	49021536	49021573	(9596043)	+	(AGAG)n	Simple_repeat	1	38	(0)	1890207
24	6.6	0.0	0.0	chr19	49021573	49021604	(9596012)	+	(GT)n	Simple_repeat	1	32	(0)	1890208
18	4.7	0.0	0.0	chr19	49021665	49021686	(9595930)	+	(AG)n	Simple_repeat	1	22	(0)	1890209
20	13.7	0.0	0.0	chr19	49021682	49021713	(9595903)	+	(GT)n	Simple_repeat	1	32	(0)	1890210
73	16.7	0.0	0.0	chr19	49141514	49141640	(9475976)	+	(GT)n	Simple_repeat	1	127	(0)	1890460
42	11.9	7.6	5.8	chr19	49141641	49141657	(9475959)	+	(GTGGTGT)n	Simple_repeat	1	155	(0)	1890461
368	33.8	7.0	1.8	chr19	49422761	49422923	(9194693)	+	L2b	LINE/L2	3204	3375	(0)	1891074
31	29.9	4.2	2.3	chr19	49423747	49423913	(9193703)	+	GA-rich	Low_complexity	1	174	(0)	1891076
380	36.2	3.2	0.0	chr19	49676362	49676513	(8941103)	C	L2b	LINE/L2	(219)	3156	3000	1891671
183	18.2	4.3	0.0	chr19	49938057	49938100	(8679516)	C	L2b	LINE/L2	(92)	3283	3238	1892252
2332	11.5	0.0	0.0	chr19	50329985	50330296	(8287320)	+	AluSx1	SINE/Alu	1	312	(0)	1893283
15	18.3	0.0	2.6	chr19	50330364	50330402	(8287214)	+	G-rich	Low_complexity	1	39	(0)	1893284
11	16.3	4.3	6.1	chr19	50330651	50330697	(8286919)	+	(GAGGCAGA)n	Simple_repeat	1	49	(0)	1893285
35	35.9	0.0	2.2	chr19	50444100	50444121	(8173495)	+	(TCCA)n	Simple_repeat	1	21	(0)	1893521
131	5.7	1.8	4.0	chr19	50444122	50444339	(8173277)	+	(CATC)n	Simple_repeat	1	222	(0)	1893522
35	35.9	0.0	2.2	chr19	50444340	50444497	(8173119)	+	(TCCA)n	Simple_repeat	2	156	(0)	1893523
538	32.4	8.3	5.8	chr19	50637906	50638387	(7979229)	C	L2a	LINE/L2	(0)	3426	2932	1893981
12	20.9	0.0	7.8	chr19	50638388	50638438	(7979178)	+	(TGGAGG)n	Simple_repeat	1	51	(0)	1893982
13	13.6	4.3	6.2	chr19	50725315	50725360	(7892256)	+	(GCCCA)n	Simple_repeat	1	48	(0)	1894171
37	30.2	0.6	4.7	chr19	50826134	50826194	(7791422)	+	(CAACC)n	Simple_repeat	2	170	(0)	1894410
12	21.1	8.7	2.7	chr19	50826267	50826335	(7791281)	+	(ATCTCA)n	Simple_repeat	1	75	(0)	1894411
17	30.7	1.2	3.5	chr19	50826423	50826507	(7791109)	+	(TCCAAC)n	Simple_repeat	1	86	(0)	1894412
336	31.3	16.6	0.5	chr19	51107789	51108000	(7509616)	+	L2b	LINE/L2	3123	3375	(0)	1895024
2173	11.0	4.6	0.0	chr19	51350479	51350770	(7266846)	C	AluSx1	SINE/Alu	(6)	306	1	1895439
988	24.1	6.3	1.0	chr19	51350771	51350979	(7266637)	C	MER58A	DNA/hAT-Charlie	(3)	221	1	1895440
843	11.9	12.8	1.4	chr19	51546780	51546918	(7070698)	+	MER54B	LTR/ERVL	1	158	(635)	1895798
610	16.9	4.0	4.0	chr19	51546919	51547042	(7070574)	+	AluJo	SINE/Alu	4	127	(185)	1895799
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
217	29.5	5.2	5.8	chr19	51690676	51690812	(6926804)	+	MIR3	SINE/MIR	58	193	(15)	1896053
96	28.0	5.8	1.5	chr19	51691175	51691606	(6926010)	+	GA-rich	Low_complexity	1	457	(0)	1896055
3394	12.9	0.9	6.5	chr19	52688725	52689313	(5928303)	+	LTR61	LTR/ERV1	4	559	(0)	1897970
12	20.9	3.1	7.6	chr19	52689433	52689496	(5928120)	+	(CTGCT)n	Simple_repeat	1	66	(0)	1897971
750	23.1	11.1	0.7	chr19	53161159	53161441	(5456175)	+	LTR52	LTR/ERVL	9	324	(97)	1898893
3054	4.8	52.4	0.4	chr19	54998653	54999161	(3618455)	C	SVA_D	Retroposon/SVA	(20)	1366	624	1902760
860	19.9	3.0	0.0	chr19	55028854	55029014	(3588602)	+	FRAM	SINE/Alu	1	166	(10)	1902813
26	14.1	2.0	0.0	chr19	55029089	55029137	(3588479)	+	GA-rich	Low_complexity	1	50	(0)	1902814
667	14.3	0.0	0.0	chr19	55152321	55152432	(3465184)	+	MER44D	DNA/TcMar-Tigger	2	113	(592)	1903109
16	21.6	0.0	0.0	chr19	55166913	55166944	(3450672)	+	(T)n	Simple_repeat	1	32	(0)	1903140
14	32.1	1.8	6.1	chr19	55370816	55370928	(3246688)	+	G-rich	Low_complexity	1	115	(0)	1903599
420	30.8	16.1	1.5	chr19	55453433	55453775	(3163841)	+	L2a	LINE/L2	2007	2409	(1010)	1903765
193	31.4	0.9	2.8	chr19	55519505	55519999	(3097617)	+	(TGA)n	Simple_repeat	2	481	(0)	1903903
2410	7.9	0.0	1.9	chr19	56175035	56175350	(2442266)	+	AluY	SINE/Alu	2	311	(0)	1905290
429	27.6	2.7	2.2	chr19	56175351	56175381	(2442235)	C	MER20	DNA/hAT-Charlie	(155)	64	32	1905289
197	26.0	4.0	14.3	chr19	56175434	56175545	(2442071)	C	L2a	LINE/L2	(61)	3365	3266	1905288
633	24.4	5.6	2.4	chr19	56403620	56403825	(2213791)	+	L2a	LINE/L2	3212	3424	(2)	1905744
16	10.8	0.0	3.1	chr19	56403838	56403869	(2213747)	+	(GAGAAA)n	Simple_repeat	1	32	(0)	1905745
16815	20.1	1.4	1.9	chr19	57653419	57656645	(960971)	+	LTR46-int	LTR/ERV1	1465	4675	(2310)	1908103
5313	11.1	8.3	0.3	chr2	6846889	6847664	(235345865)	C	LTR25	LTR/ERV1	(0)	844	1	1919104
116	25.7	0.6	2.1	chr2	8626737	8627062	(233566467)	+	(GT)n	Simple_repeat	1	328	(0)	1921662
489	25.2	0.4	1.4	chr2	10311756	10312946	(231880583)	+	(CATCAT)n	Simple_repeat	1	1196	(0)	1924554
3435	14.9	4.9	4.4	chr2	10879529	10880159	(231313370)	+	MER51A	LTR/ERV1	1	634	(0)	1925654
31	4.8	4.7	0.0	chr2	12162347	12162389	(230031140)	+	(AC)n	Simple_repeat	1	45	(0)	1927863
93	22.7	5.0	2.1	chr2	12162390	12162558	(230030971)	+	(CA)n	Simple_repeat	2	178	(0)	1927864
26	2.6	7.5	0.0	chr2	12162559	12162598	(230030931)	+	(ATACCAC)n	Simple_repeat	1	43	(0)	1927865
93	22.7	5.0	2.1	chr2	12162599	12162676	(230030853)	+	(CA)n	Simple_repeat	1	81	(0)	1927866
3414	18.8	2.7	0.9	chr2	20236579	20237260	(221956269)	C	L1MC2	LINE/L1	(8)	6336	5642	1939994
29	8.6	4.0	0.0	chr2	20379113	20379162	(221814367)	+	(CT)n	Simple_repeat	1	52	(0)	1940268
249	20.4	2.6	0.4	chr2	29876276	29876821	(212316708)	+	(GTGATG)n	Simple_repeat	1	560	(0)	1955990
948	31.8	13.7	6.6	chr2	30278419	30279387	(211914142)	+	L2c	LINE/L2	1317	2371	(1048)	1956689
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
108	14.7	0.9	3.2	chr2	38386316	38386530	(203806999)	+	GA-rich	Low_complexity	1	217	(0)	1969119
327	29.9	14.1	4.8	chr2	42562771	42563230	(199630299)	+	L2	LINE/L2	2348	2857	(562)	1975870
36	33.4	1.8	4.4	chr2	45005688	45005910	(197187619)	+	A-rich	Low_complexity	1	227	(0)	1980084
210	23.3	0.2	0.0	chr2	46879466	46879911	(195313618)	+	(TGGA)n	Simple_repeat	1	447	(0)	1982980
2340	11.0	0.0	0.0	chr2	47319423	47319730	(194873799)	C	AluSz	SINE/Alu	(3)	309	2	1983806
44	0.0	0.0	0.0	chr2	48106425	48106462	(194087067)	+	(GT)n	Simple_repeat	1	38	(0)	1985375
347	34.8	7.7	3.0	chr2	55697690	55698026	(186495503)	+	L2c	LINE/L2	2771	3114	(261)	1996421
13	20.9	0.0	0.0	chr2	55698087	55698119	(186495410)	+	(TTTA)n	Simple_repeat	1	33	(0)	1996422
889	27.6	1.5	1.4	chr2	55698137	55698399	(186495130)	+	MIR	SINE/MIR	4	268	(0)	1996423
24	8.9	2.8	0.0	chr2	68135537	68135572	(174057957)	+	(GA)n	Simple_repeat	1	37	(0)	2015107
5220	11.7	1.4	1.4	chr2	69798832	69799610	(172393919)	C	LTR19C	LTR/ERV1	(0)	779	1	2017771
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
677	33.9	5.7	5.4	chr2	73068622	73069516	(169124013)	C	L2b	LINE/L2	(0)	3375	2470	2023051
184	28.6	14.4	0.8	chr2	73737577	73737696	(168455833)	+	MIR3	SINE/MIR	30	168	(40)	2024107
2072	8.9	0.4	0.0	chr2	73737719	73737987	(168455542)	C	AluY	SINE/Alu	(16)	295	26	2024108
1999	12.9	0.0	0.4	chr2	74242690	74242953	(167950576)	C	AluSz	SINE/Alu	(49)	263	1	2025069
324	30.6	1.1	0.4	chr2	84909186	84910150	(157283379)	+	(ACC)n	Simple_repeat	1	976	(0)	2039639
1271	16.4	5.3	2.3	chr2	85329163	85329381	(156864148)	+	AluSx3	SINE/Alu	82	307	(4)	2040535
1909	12.0	1.4	6.3	chr2	85329384	85329654	(156863875)	+	L1MA4	LINE/L1	5323	5581	(719)	2040534
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
1612	10.5	11.8	0.4	chr2	85546187	85546425	(156647104)	+	AluY	SINE/Alu	21	290	(21)	2041002
1873	11.4	5.2	0.0	chr2	85546437	85546707	(156646822)	+	AluSx1	SINE/Alu	3	288	(24)	2041003
1468	12.9	2.0	5.1	chr2	85933968	85934223	(156259306)	+	AluJb	SINE/Alu	54	301	(11)	2041775
1294	18.9	6.4	2.8	chr2	85934224	85934506	(156259023)	+	LTR64	LTR/ERV1	27	320	(208)	2041776
13	23.0	2.0	4.0	chr2	88003239	88003287	(154190242)	+	(CTC)n	Simple_repeat	1	50	(0)	2045100
420	30.6	0.2	0.3	chr2	100015822	100015917	(142177612)	+	(GTGGTG)n	Simple_repeat	1	93	(0)	2057275
34	8.6	0.0	0.0	chr2	100015918	100015967	(142177562)	+	(TGATGGTGA)n	Simple_repeat	1	50	(0)	2057276
420	30.6	0.2	0.3	chr2	100015968	100016590	(142176939)	+	(GTGGTG)n	Simple_repeat	4	628	(0)	2057277
240	29.8	6.0	0.0	chr2	102069667	102069760	(140123769)	C	MIRb	SINE/MIR	(82)	186	87	2060598
2264	10.4	1.0	0.0	chr2	105477141	105477437	(136716092)	C	AluSz	SINE/Alu	(12)	300	1	2065011
435	23.8	4.7	4.7	chr2	105477438	105477483	(136716046)	C	MER5A1	DNA/hAT-Charlie	(91)	75	30	2065010
287	28.2	15.5	2.4	chr2	105669580	105669786	(136523743)	C	LTR33A	LTR/ERVL	(1)	519	281	2065311
3061	8.5	7.4	0.5	chr2	110691825	110692262	(131501267)	+	LTR7C	LTR/ERV1	1	471	(0)	2072579
77	24.7	2.2	1.8	chr2	113058678	113058900	(129134629)	+	GA-rich	Low_complexity	1	228	(0)	2076152
16	25.4	5.1	2.4	chr2	119544396	119544473	(122649056)	+	(GCGCCG)n	Simple_repeat	1	82	(0)	2085553
4734	12.3	4.9	5.2	chr2	126307724	126308563	(115884966)	C	LTR1A2	LTR/ERV1	(0)	837	1	2095747
2510	5.6	0.0	0.0	chr2	126308579	126308865	(115884664)	+	AluY	SINE/Alu	1	287	(24)	2095748
160	30.7	0.2	0.4	chr2	126677107	126677594	(115515935)	+	(TG)n	Simple_repeat	1	489	(0)	2096228
5756	14.8	8.1	2.5	chr2	129318487	129319626	(112873903)	C	MER52C	LTR/ERV1	(67)	1211	3	2100313
28	3.3	0.0	0.0	chr2	137931201	137931231	(104262298)	+	(GAAG)n	Simple_repeat	1	31	(0)	2112737
1809	17.8	3.5	0.7	chr2	137931232	137931245	(104262284)	+	AluJr	SINE/Alu	299	312	(0)	2112736
153	6.2	2.8	3.1	chr2	137931246	137931495	(104262034)	+	(AGAA)n	Simple_repeat	1	257	(0)	2112738
909	31.7	12.0	5.5	chr2	144019484	144020105	(98173424)	+	HAL1	LINE/L1	227	921	(1586)	2120811
2021	13.2	5.7	0.0	chr2	144020106	144020422	(98173107)	+	LTR1A2	LTR/ERV1	1	336	(501)	2120813
629	31.6	6.7	5.9	chr2	144533012	144533407	(97660122)	+	L2a	LINE/L2	2403	2805	(614)	2121510
3880	10.9	3.2	0.2	chr2	144533408	144533920	(97659609)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2121511
203	32.2	13.6	6.8	chr2	148626220	148626662	(93566867)	C	L2c	LINE/L2	(0)	3387	2910	2126905
198	33.6	0.7	12.4	chr2	148626683	148626835	(93566694)	C	L2c	LINE/L2	(580)	2839	2705	2126905
2302	11.8	0.0	0.0	chr2	148880123	148880419	(93313110)	C	AluSx	SINE/Alu	(14)	298	2	2127299
699	25.3	1.7	0.0	chr2	149004681	149004858	(93188671)	C	MIR	SINE/MIR	(1)	261	81	2127466
333	28.5	14.6	6.0	chr2	149618101	149618350	(92575179)	C	LTR78	LTR/ERV1	(46)	1258	984	2128318
49	20.3	0.8	0.0	chr2	149618351	149618488	(92575041)	+	(GT)n	Simple_repeat	1	139	(0)	2128319
2324	6.9	3.9	6.6	chr2	151409228	151409547	(90783982)	C	AluSx	SINE/Alu	(1)	311	1	2130855
164	37.1	1.1	1.4	chr2	152074182	152074945	(90118584)	+	(ACC)n	Simple_repeat	1	772	(0)	2131802
651	27.3	7.5	0.9	chr2	159001609	159001819	(83191710)	C	MIRb	SINE/MIR	(14)	254	29	2140967
653	24.1	2.0	4.0	chr2	169033185	169033383	(73160146)	C	L2a	LINE/L2	(36)	3390	3196	2154419
21	23.2	0.0	1.9	chr2	169033384	169033435	(73160094)	+	(TG)n	Simple_repeat	1	52	(0)	2154420
476	26.7	11.8	1.5	chr2	169033440	169033701	(73159828)	C	L2a	LINE/L2	(222)	3204	2895	2154419
1330	16.2	0.9	1.4	chr2	169656087	169656296	(72537233)	+	AluJb	SINE/Alu	81	289	(23)	2155363
83	23.2	2.5	2.4	chr2	169656297	169656536	(72536993)	+	GA-rich	Low_complexity	1	246	(0)	2155364
1302	18.8	5.0	18.6	chr2	169717196	169717593	(72475936)	C	LTR18B	LTR/ERVL	(4)	341	1	2155456
1841	13.5	0.0	0.4	chr2	169717684	169717927	(72475602)	C	AluSp	SINE/Alu	(70)	243	1	2155457
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
15	14.9	2.6	2.5	chr2	170714767	170714805	(71478724)	+	(GTGCGG)n	Simple_repeat	1	40	(0)	2157102
23	3.7	0.0	0.0	chr2	170714945	170714972	(71478557)	+	(GT)n	Simple_repeat	1	28	(0)	2157103
1354	28.3	5.8	0.6	chr2	171516649	171517125	(70676404)	C	LTR33	LTR/ERVL	(12)	503	1	2158567
51	38.6	0.4	0.4	chr2	173750898	173751141	(68442388)	+	(GT)n	Simple_repeat	1	245	(0)	2162109
17	25.1	5.6	0.0	chr2	191571327	191571380	(50622149)	+	(TC)n	Simple_repeat	1	57	(0)	2186072
22	13.4	3.9	1.9	chr2	191571383	191571433	(50622096)	+	(TTGTT)n	Simple_repeat	1	53	(0)	2186073
5356	17.1	2.7	0.2	chr2	195595306	195596180	(46597349)	C	MER54A	LTR/ERVL	(4)	897	1	2191162
242	25.0	0.0	0.0	chr2	197452973	197453024	(44740505)	C	MIRc	SINE/MIR	(64)	204	153	2194055
235	30.6	2.7	0.0	chr2	200655993	200656064	(41537465)	+	MamGypsy2-I	LTR/Gypsy	2738	2811	(1355)	2198652
256	25.2	18.0	6.8	chr2	200656101	200656334	(41537195)	+	MamGypsy2-I	LTR/Gypsy	3893	4158	(8)	2198652
373	24.6	13.1	0.8	chr2	218398217	218398343	(23795186)	+	MIRb	SINE/MIR	54	198	(70)	2226035
58	32.1	2.6	0.4	chr2	218831443	218831674	(23361855)	+	(AC)n	Simple_repeat	1	238	(0)	2226888
51	0.0	0.0	0.0	chr20	348485	348528	(64095639)	+	(GT)n	Simple_repeat	1	44	(0)	2262726
2101	15.7	8.5	3.7	chr20	415676	416078	(64028089)	C	MSTA	LTR/ERVL-MaLR	(0)	428	5	2262895
1236	21.6	10.5	2.5	chr20	416079	416147	(64028020)	C	L1MC5a	LINE/L1	(544)	2233	2152	2262893
2242	6.8	0.0	1.8	chr20	416155	416433	(64027734)	C	AluY	SINE/Alu	(11)	300	27	2262896
5727	15.5	6.2	2.7	chr20	1188184	1188411	(63255756)	+	L1MC3	LINE/L1	6625	6854	(931)	2264572
120	6.3	5.5	3.9	chr20	1188412	1188682	(63255485)	+	(AC)n	Simple_repeat	1	286	(0)	2264574
5727	15.5	6.2	2.7	chr20	1188683	1189495	(63254672)	+	L1MC3	LINE/L1	6855	7703	(82)	2264572
17	16.0	0.0	0.0	chr20	3470925	3470959	(60973208)	+	(CGCA)n	Simple_repeat	1	35	(0)	2268952
2561	4.9	0.0	1.6	chr20	4015793	4016099	(60428068)	+	AluY	SINE/Alu	1	302	(9)	2269959
13	26.9	2.0	1.9	chr20	5126688	5126738	(59317429)	+	(CGCTC)n	Simple_repeat	1	52	(0)	2272075
4822	11.3	7.9	2.5	chr20	25749855	25750645	(38693522)	C	LTR1A2	LTR/ERV1	(0)	837	1	2302644
56	31.6	2.0	1.0	chr20	30595541	30595741	(33848426)	+	(CAT)n	Simple_repeat	1	205	(0)	2305242
280	10.9	2.1	0.0	chr20	30595745	30595790	(33848377)	+	Alu	SINE/Alu	178	224	(78)	2305243
71	29.2	1.7	2.1	chr20	30595809	30596045	(33848122)	+	(CAT)n	Simple_repeat	1	241	(0)	2305244
18	19.8	1.7	6.7	chr20	31594582	31594653	(32849514)	+	(GT)n	Simple_repeat	1	68	(0)	2306358
16	12.0	4.6	8.8	chr20	31594811	31594875	(32849292)	+	(CTGTTGG)n	Simple_repeat	1	68	(0)	2306359
14	11.6	3.6	0.0	chr20	31675922	31675949	(32768218)	+	(CCT)n	Simple_repeat	1	29	(0)	2306601
17	13.3	7.8	1.8	chr20	31869841	31869891	(32574276)	+	GA-rich	Low_complexity	1	55	(0)	2307057
291	33.6	23.6	1.0	chr20	32567607	32567800	(31876367)	+	MIR	SINE/MIR	15	256	(6)	2308695
136	27.3	1.4	0.0	chr20	32567836	32568193	(31875974)	+	(CAT)n	Simple_repeat	1	363	(0)	2308696
198	13.8	3.8	1.7	chr20	33334125	33334524	(31109643)	+	(GATG)n	Simple_repeat	1	415	(0)	2310452
514	31.8	2.0	2.4	chr20	33401075	33401325	(31042842)	C	MIR	SINE/MIR	(10)	252	3	2310617
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
376	31.4	17.3	0.8	chr20	33674895	33675282	(30768885)	+	L2c	LINE/L2	2742	3209	(178)	2311316
2451	6.8	1.0	0.0	chr20	35616634	35616929	(28827238)	C	AluSp	SINE/Alu	(14)	299	1	2315686
996	25.4	13.8	2.6	chr20	36051234	36051650	(28392517)	C	L2a	LINE/L2	(0)	3426	2956	2316727
431	30.5	0.0	0.8	chr20	36051671	36051799	(28392368)	C	L2a	LINE/L2	(648)	2771	2644	2316727
468	29.4	7.6	7.1	chr20	36051816	36052360	(28391807)	C	L2-3_Crp	LINE/L2	(864)	1232	841	2316728
15	37.3	3.0	2.9	chr20	36924253	36924352	(27519815)	+	G-rich	Low_complexity	1	103	(0)	2318801
46	18.6	2.0	7.1	chr20	36924353	36924438	(27519729)	+	A-rich	Low_complexity	4	179	(0)	2318802
900	18.2	12.6	6.0	chr20	36924454	36924734	(27519433)	C	LTR56	LTR/ERV1	(135)	310	9	2318803
30	21.0	5.3	4.2	chr20	37415861	37415973	(27028194)	+	(GT)n	Simple_repeat	1	119	(0)	2319992
24	11.8	7.2	2.7	chr20	38159208	38159231	(26284936)	+	A-rich	Low_complexity	1	23	(0)	2321518
2125	9.9	0.0	0.0	chr20	38159232	38159525	(26284642)	+	L1PREC2	LINE/L1	5867	6160	(0)	2321519
19	24.3	0.0	2.0	chr20	38165543	38165592	(26278575)	+	(AC)n	Simple_repeat	1	50	(0)	2321533
44	4.4	0.0	0.0	chr20	38165672	38165718	(26278449)	+	(AC)n	Simple_repeat	1	47	(0)	2321534
18	21.4	2.3	0.0	chr20	38165779	38165821	(26278346)	+	(AC)n	Simple_repeat	1	44	(0)	2321534
191	13.1	5.0	1.7	chr20	38356059	38356455	(26087712)	+	(AC)n	Simple_repeat	1	417	(0)	2322001
1780	18.0	0.0	3.5	chr20	44185342	44185652	(20258515)	+	AluJb	SINE/Alu	1	300	(12)	2332873
127	20.8	1.1	0.4	chr20	44185656	44185927	(20258240)	+	(ATGG)n	Simple_repeat	1	275	(0)	2332874
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
12	19.1	2.6	2.6	chr20	49319422	49319459	(15124708)	+	(CAAGGAG)n	Simple_repeat	1	39	(0)	2344098
181	25.4	7.8	0.0	chr20	49319531	49319589	(15124578)	C	MIR	SINE/MIR	(172)	90	27	2344099
74	23.0	4.9	1.6	chr20	50404213	50404258	(14039909)	+	GA-rich	Low_complexity	1	254	(0)	2346828
64	8.8	11.7	3.6	chr20	50404259	50404454	(14039713)	+	(GAGACA)n	Simple_repeat	1	219	(0)	2346829
77	16.6	3.1	3.5	chr20	50468507	50468678	(13975489)	+	(TCT)n	Simple_repeat	1	169	(0)	2347019
1788	17.5	1.6	2.2	chr20	50468679	50468992	(13975175)	C	AluJo	SINE/Alu	(0)	312	1	2347020
671	30.3	14.1	4.1	chr20	51383569	51384456	(13059711)	C	L2a	LINE/L2	(1)	3425	2378	2349041
2128	9.3	0.7	0.4	chr20	53175162	53175440	(11268727)	C	AluSq2	SINE/Alu	(33)	280	1	2352942
2523	14.8	14.2	3.8	chr20	55094383	55094930	(9349237)	+	LTR18B	LTR/ERVL	1	614	(0)	2356831
377	14.3	0.0	0.0	chr20	62083384	62083439	(2360728)	C	AluSz6	SINE/Alu	(12)	300	245	2368092
967	20.4	9.5	2.9	chr20	62083599	62083905	(2360262)	+	MLT2B3	LTR/ERVL	385	717	(0)	2368093
36	35.1	1.9	4.1	chr20	62776953	62777214	(1666953)	+	G-rich	Low_complexity	1	267	(0)	2368932
16	24.7	0.0	3.6	chr20	63520473	63520528	(923639)	+	G-rich	Low_complexity	1	56	(0)	2369660
182	22.1	4.1	2.9	chr21	6070007	6070596	(40639387)	+	(GTGTGTG)n	Simple_repeat	1	614	(0)	2371506
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
88	3.4	0.0	0.0	chr21	10542531	10542621	(36167362)	+	(CCAT)n	Simple_repeat	1	91	(0)	2375722
2179	8.0	0.0	2.8	chr21	29722307	29722593	(16987390)	+	AluY	SINE/Alu	33	311	(0)	2398751
213	33.6	7.6	7.6	chr21	29870729	29871044	(16838939)	+	L2c	LINE/L2	2767	3082	(337)	2398978
204	29.8	3.1	12.2	chr21	29871147	29871253	(16838730)	+	L2c	LINE/L2	3268	3364	(23)	2398978
604	31.1	0.9	5.9	chr21	29871267	29871502	(16838481)	C	MIRb	SINE/MIR	(0)	268	45	2398979
45	5.2	1.6	1.6	chr21	31761061	31761123	(14948860)	+	(CCTT)n	Simple_repeat	1	64	(0)	2402022
44	20.8	0.0	0.0	chr21	31761124	31761210	(14948773)	+	(TCTC)n	Simple_repeat	3	89	(0)	2402023
2348	10.5	0.3	0.0	chr21	31761211	31761516	(14948467)	C	AluSz	SINE/Alu	(5)	307	1	2402024
2266	9.5	0.3	0.0	chr21	33367955	33368237	(13341746)	C	AluSx1	SINE/Alu	(28)	284	1	2404807
18	0.0	0.0	0.0	chr21	33368257	33368276	(13341707)	+	(TG)n	Simple_repeat	1	20	(0)	2404808
3105	13.8	4.9	2.5	chr21	33368314	33368965	(13341018)	+	LTR28C	LTR/ERV1	1	634	(2)	2404809
965	26.7	12.4	5.5	chr21	34665507	34665963	(12044020)	C	L2a	LINE/L2	(250)	3176	2649	2406988
34	5.5	0.0	0.0	chr21	34665964	34666001	(12043982)	+	(GT)n	Simple_repeat	1	38	(0)	2406990
746	15.7	1.6	1.6	chr21	34666004	34666124	(12043859)	C	FLAM_A	SINE/Alu	(21)	121	1	2406991
2015	10.6	8.7	0.0	chr21	36437585	36437857	(10272126)	+	AluSq2	SINE/Alu	1	299	(14)	2409882
941	30.1	15.9	1.3	chr21	36437858	36438072	(10271911)	C	L2	LINE/L2	(1165)	2254	1986	2409881
17	0.0	0.0	0.0	chr21	36438131	36438149	(10271834)	+	(T)n	Simple_repeat	1	19	(0)	2409883
534	31.3	4.0	0.0	chr21	36438186	36438402	(10271581)	C	L1ME3G	LINE/L1	(441)	483	258	2409884
171	31.5	0.0	0.4	chr21	38115742	38116229	(8593754)	+	(CTA)n	Simple_repeat	1	488	(0)	2412599
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
133	15.6	11.9	5.1	chr21	42670034	42670824	(4039159)	+	(TTCACAC)n	Simple_repeat	1	885	(0)	2419161
1966	12.3	0.3	3.9	chr21	43659016	43659324	(3050659)	+	AluJr	SINE/Alu	1	298	(14)	2420579
2048	12.3	0.0	0.7	chr21	43782242	43782525	(2927458)	+	AluSq	SINE/Alu	1	282	(31)	2420796
33	0.0	0.0	0.0	chr21	43782527	43782557	(2927426)	+	(AAAC)n	Simple_repeat	1	31	(0)	2420797
1580	19.7	7.6	8.7	chr21	43782558	43782666	(2927317)	+	LTR56	LTR/ERV1	336	443	(2)	2420794
4857	11.3	5.8	3.7	chr21	44485340	44486157	(2223826)	+	LTR1A2	LTR/ERV1	1	837	(0)	2421815
225	27.2	6.1	3.2	chr21	44893767	44893861	(1816122)	+	L2c	LINE/L2	3281	3378	(9)	2422289
260	21.1	6.2	1.2	chr21	44893868	44894035	(1815948)	+	HERVIP10FH-int	LTR/ERV1	822	998	(4104)	2422290
19	16.5	0.0	0.0	chr21	45033696	45033729	(1676254)	+	(TC)n	Simple_repeat	1	34	(0)	2422429
4420	26.2	7.0	1.9	chr21	45065695	45067517	(1642466)	+	L1ME3A	LINE/L1	3795	5710	(463)	2422486
921	28.0	3.1	2.2	chr21	45067523	45067840	(1642143)	+	L1ME3A	LINE/L1	5850	6170	(3)	2422486
20	3.1	6.1	0.0	chr21	45073746	45073778	(1636205)	+	(AAAC)n	Simple_repeat	1	35	(0)	2422492
387	18.9	1.9	7.8	chr21	45360498	45360543	(1349440)	+	MLT1D	LTR/ERVL-MaLR	573	616	(64)	2422787
2322	7.8	2.3	0.0	chr21	45360544	45360837	(1349146)	C	AluSx1	SINE/Alu	(11)	301	1	2422788
191	30.9	1.9	0.0	chr21	45507964	45508543	(1201440)	+	(GGTG)n	Simple_repeat	1	591	(0)	2422900
294	19.4	6.9	1.1	chr21	45591254	45592117	(1117866)	+	(CA)n	Simple_repeat	1	924	(0)	2422970
8118	4.3	0.0	0.7	chr21	46225021	46226027	(483956)	+	LTR13	LTR/ERVK	6	1005	(2)	2423633
726	11.2	0.0	2.8	chr21	46320431	46320537	(389446)	+	AluSq	SINE/Alu	205	308	(5)	2423803
1353	15.5	17.6	0.0	chr21	46320538	46320992	(388991)	+	LTR62	LTR/ERVL	65	604	(105)	2423801
3245	10.9	5.1	2.6	chr22	16558245	16561621	(34256847)	+	(CAAGCCAGC)n	Simple_repeat	1	3499	(0)	2427518
977	15.3	1.3	1.3	chr22	16594146	16594302	(34224166)	+	AluJb	SINE/Alu	134	290	(22)	2427565
15	28.7	0.0	0.0	chr22	16748009	16748050	(34070418)	+	(CA)n	Simple_repeat	1	42	(0)	2427757
25	23.3	1.7	0.0	chr22	16748044	16748103	(34070365)	+	GA-rich	Low_complexity	1	61	(0)	2427758
952	28.3	8.6	3.3	chr22	16748130	16748787	(34069681)	C	SST1	Satellite/centr	(7)	1556	861	2427759
7295	7.0	0.0	0.4	chr22	16766369	16767295	(34051173)	+	L1PA4	LINE/L1	1	923	(5232)	2427794
26741	4.0	0.0	0.4	chr22	16767306	16772131	(34046337)	+	L1PA4	LINE/L1	1347	6155	(0)	2427794
227	39.9	5.1	3.5	chr22	19128975	19129262	(31689206)	+	L2c	LINE/L2	2917	3209	(178)	2431487
351	36.9	4.5	1.4	chr22	19151881	19152163	(31666305)	+	L2	LINE/L2	2246	2537	(882)	2431513
660	28.5	7.5	9.3	chr22	19153185	19153729	(31664739)	+	MLT1G1	LTR/ERVL-MaLR	3	578	(1)	2431517
296	25.9	13.7	4.8	chr22	19155020	19155185	(31663283)	C	ERV3-16A3_I-int	LTR/ERVL	(1816)	3941	3759	2431523
2040	14.2	0.0	2.6	chr22	19155343	19155651	(31662817)	+	AluJo	SINE/Alu	1	301	(11)	2431524
2253	9.4	0.0	0.3	chr22	19160675	19160962	(31657506)	+	AluY	SINE/Alu	1	287	(24)	2431542
100	27.2	0.0	0.0	chr22	19160963	19161191	(31657277)	+	(TA)n	Simple_repeat	1	229	(0)	2431543
2294	9.0	1.0	2.6	chr22	19166267	19166578	(31651890)	+	AluSq4	SINE/Alu	1	307	(4)	2431560
5250	11.8	4.4	2.3	chr22	19296357	19297175	(31521293)	C	LTR1A2	LTR/ERV1	(0)	837	1	2431753
2190	12.8	0.3	2.8	chr22	19303066	19303385	(31515083)	+	AluSx	SINE/Alu	1	312	(0)	2431763
6924	12.8	2.6	6.9	chr22	19303386	19303599	(31514869)	+	PRIMAX-int	LTR/ERV1	1611	1787	(2315)	2431757
9531	13.2	2.0	2.6	chr22	19305447	19306571	(31511897)	+	PRIMAX-int	LTR/ERV1	2387	3510	(592)	2431757
807	17.2	0.0	0.0	chr22	19306572	19306705	(31511763)	C	AluSq	SINE/Alu	(4)	309	176	2431769
1750	8.5	11.6	1.2	chr22	19306711	19306957	(31511511)	C	AluSq	SINE/Alu	(33)	280	5	2431770
279	10.4	0.0	4.0	chr22	19306959	19307008	(31511460)	C	MLT1-int	LTR/ERVL-MaLR	(1311)	60	13	2431771
575	14.3	6.2	3.7	chr22	19307009	19307117	(31511351)	C	MLT2B4	LTR/ERVL	(444)	112	1	2431772
2200	12.0	0.0	1.9	chr22	19322675	19322983	(31495485)	+	AluSq	SINE/Alu	1	303	(10)	2431803
1915	13.7	1.7	1.0	chr22	19323451	19323742	(31494726)	+	AluJb	SINE/Alu	1	294	(18)	2431805
2129	12.2	0.0	1.0	chr22	19323746	19324039	(31494429)	+	AluSx1	SINE/Alu	2	292	(20)	2431806
3534	19.3	4.4	5.2	chr22	19325948	19326556	(31491912)	+	L1MB8	LINE/L1	5480	6072	(106)	2431809
463	21.1	0.0	1.9	chr22	19326555	19326660	(31491808)	+	L1MB8	LINE/L1	6015	6118	(60)	2431811
7452	19.7	7.4	12.1	chr22	19530462	19531290	(31287178)	+	L1MDa	LINE/L1	195	1081	(5552)	2432143
2151	11.3	0.3	0.3	chr22	19531291	19531599	(31286869)	+	AluSc8	SINE/Alu	1	309	(2)	2432145
1804	14.6	0.3	1.0	chr22	19533385	19533678	(31284790)	C	AluSx	SINE/Alu	(20)	292	1	2432151
7452	19.7	7.4	12.1	chr22	19533679	19534242	(31284226)	+	L1MDa	LINE/L1	1699	2263	(4370)	2432143
29	5.3	2.5	0.0	chr22	19535468	19535507	(31282961)	+	(TTAT)n	Simple_repeat	1	41	(0)	2432155
1971	12.9	0.0	0.0	chr22	19535508	19535786	(31282682)	C	AluSg	SINE/Alu	(30)	280	2	2432156
815	15.0	0.0	0.0	chr22	19535792	19535918	(31282550)	C	FLAM_C	SINE/Alu	(15)	128	2	2432157
1159	17.3	7.1	0.0	chr22	19551310	19551558	(31266910)	C	L1MB5	LINE/L1	(210)	6462	6195	2432196
2198	10.6	0.0	0.7	chr22	19551559	19551861	(31266607)	C	AluSx1	SINE/Alu	(11)	301	1	2432197
507	32.2	10.8	5.6	chr22	19567985	19568342	(31250126)	C	L2b	LINE/L2	(23)	3352	2974	2432234
13	32.7	0.8	1.6	chr22	19568544	19568610	(31249858)	+	G-rich	Low_complexity	1	66	(0)	2432235
395	25.2	5.3	0.9	chr22	19570007	19570114	(31248354)	C	MIR	SINE/MIR	(49)	213	101	2432240
745	29.5	10.2	3.7	chr22	19574976	19575220	(31243248)	C	L1ME3G	LINE/L1	(372)	552	338	2432246
2076	11.3	0.3	1.1	chr22	19575221	19575534	(31242934)	C	AluSz	SINE/Alu	(0)	312	1	2432247
745	29.1	11.2	3.6	chr22	19575535	19575816	(31242652)	C	L1ME3G	LINE/L1	(587)	337	9	2432246
4132	12.8	5.8	0.4	chr22	19632293	19633000	(31185468)	C	LTR1A2	LTR/ERV1	(1)	836	89	2432348
886	19.4	3.7	0.0	chr22	19633009	19633163	(31185305)	+	AluJo	SINE/Alu	37	197	(115)	2432349
11811	16.2	4.5	2.1	chr22	19653151	19653386	(31165082)	+	L1M4	LINE/L1	5046	5295	(1349)	2432369
1516	11.8	3.9	0.0	chr22	19653387	19653607	(31164861)	+	AluSx	SINE/Alu	1	230	(82)	2432378
16	10.0	0.0	0.0	chr22	19653620	19653641	(31164827)	+	(A)n	Simple_repeat	1	22	(0)	2432379
1504	8.1	1.0	0.0	chr22	19653642	19653839	(31164629)	+	AluSx	SINE/Alu	104	303	(9)	2432380
5563	10.4	3.6	3.4	chr22	19667218	19668050	(31150418)	+	LTR1A2	LTR/ERV1	3	837	(0)	2432397
1928	15.5	3.9	1.0	chr22	19682760	19683062	(31135406)	+	AluJr4	SINE/Alu	1	312	(0)	2432426
8325	17.0	5.5	5.3	chr22	19683063	19683198	(31135270)	+	L1MDa	LINE/L1	2391	2504	(4129)	2432423
2327	7.8	0.0	0.0	chr22	19683199	19683480	(31134988)	+	AluYm1	SINE/Alu	2	283	(28)	2432427
1955	14.5	0.7	1.7	chr22	19689954	19690249	(31128219)	C	AluJo	SINE/Alu	(15)	297	5	2432435
348	21.2	1.2	0.0	chr22	19690257	19690336	(31128132)	C	L1MC4	LINE/L1	(727)	7155	7075	2432436
478	30.3	8.6	4.9	chr22	19690431	19690552	(31127916)	C	L1MC4	LINE/L1	(1110)	6932	6809	2432436
294	25.3	4.8	0.0	chr22	19703011	19703089	(31115379)	+	HAL1	LINE/L1	2215	2297	(210)	2432463
1833	15.4	1.6	1.6	chr22	19703133	19703437	(31115031)	C	AluJb	SINE/Alu	(6)	306	2	2432464
11	20.0	0.0	8.3	chr22	19710442	19710489	(31107979)	+	(AGCAGG)n	Simple_repeat	1	48	(0)	2432470
18	4.0	0.0	0.0	chr22	19717641	19717666	(31100802)	+	(CCCTT)n	Simple_repeat	1	26	(0)	2432478
58	31.0	1.1	1.1	chr22	19717763	19717945	(31100523)	+	(CA)n	Simple_repeat	1	185	(0)	2432479
13	11.2	3.2	3.1	chr22	19723472	19723502	(31094966)	+	G-rich	Low_complexity	1	32	(0)	2432483
346	35.0	4.1	3.6	chr22	19816434	19816821	(31001647)	C	L1MC4	LINE/L1	(1191)	6851	6462	2432568
322	24.6	4.3	2.9	chr22	19909288	19909426	(30909042)	+	L1ME3G	LINE/L1	5679	5798	(2084)	2432667
255	7.3	6.4	1.1	chr22	19909490	19910005	(30908463)	+	(AC)n	Simple_repeat	1	549	(0)	2432668
275	30.0	4.2	2.3	chr22	19994077	19995352	(30823116)	+	(GATG)n	Simple_repeat	1	1330	(0)	2432773
14	25.2	0.0	5.3	chr22	20116722	20116778	(30701690)	+	(CCCTC)n	Simple_repeat	1	57	(0)	2432923
14	18.7	2.2	4.3	chr22	20117136	20117181	(30701287)	+	(CCGC)n	Simple_repeat	1	47	(0)	2432924
2112	11.3	0.0	7.2	chr22	20189126	20189460	(30629008)	+	AluY	SINE/Alu	1	311	(0)	2432998
1220	10.9	0.5	11.8	chr22	20189461	20189639	(30628829)	+	L1MA3	LINE/L1	6145	6298	(7)	2432997
1724	15.2	5.2	4.5	chr22	20189653	20189961	(30628507)	+	AluJr	SINE/Alu	1	311	(1)	2432999
2300	10.7	0.0	0.0	chr22	20190154	20190452	(30628016)	+	AluSx1	SINE/Alu	1	299	(13)	2433001
5194	11.0	5.7	1.6	chr22	20190453	20191190	(30627278)	+	LTR1A2	LTR/ERV1	65	836	(1)	2433000
37	7.6	2.7	2.7	chr22	20199436	20199508	(30618960)	+	(ATCC)n	Simple_repeat	1	75	(0)	2433007
2482	9.0	0.0	0.0	chr22	20201052	20201361	(30617107)	+	AluSz	SINE/Alu	1	310	(2)	2433009
53	17.7	0.9	1.8	chr22	20201374	20201483	(30616985)	+	(TCCC)n	Simple_repeat	1	111	(0)	2433010
16	8.6	4.9	4.7	chr22	20203597	20203637	(30614831)	+	(CAGGAG)n	Simple_repeat	1	43	(0)	2433012
299	29.7	3.7	7.2	chr22	20238056	20238243	(30580225)	+	MIR	SINE/MIR	6	186	(82)	2433035
307	25.2	0.3	0.3	chr22	20251479	20252202	(30566266)	+	(ATCATC)n	Simple_repeat	1	726	(0)	2433047
213	31.2	12.3	0.0	chr22	20276458	20276550	(30541918)	+	MIR1_Amn	SINE/MIR	65	170	(60)	2433068
4326	11.8	7.1	1.8	chr22	20286924	20287707	(30530761)	+	LTR1A2	LTR/ERV1	9	837	(0)	2433073
2392	7.8	2.0	0.0	chr22	20288531	20288825	(30529643)	C	AluSc5	SINE/Alu	(7)	302	2	2433074
424	30.3	5.2	4.8	chr22	20295533	20295761	(30522707)	C	L1M4c	LINE/L1	(6129)	255	26	2433084
2055	12.5	0.3	0.7	chr22	20378836	20379124	(30439344)	+	AluSp	SINE/Alu	24	311	(2)	2433201
2218	11.4	0.3	1.3	chr22	20383270	20383577	(30434891)	C	AluSp	SINE/Alu	(7)	306	2	2433215
2501	21.4	3.3	3.2	chr22	20383578	20384060	(30434408)	C	L1MA7	LINE/L1	(345)	5829	5392	2433206
960	31.1	11.1	1.4	chr22	20414335	20414829	(30403639)	+	LTR53-int	LTR/ERVL	918	1466	(1863)	2433272
14	19.6	0.0	6.4	chr22	20419562	20419608	(30398860)	+	(CCTAAC)n	Simple_repeat	1	47	(0)	2433287
30	0.0	0.0	0.0	chr22	20421203	20421228	(30397240)	+	(GT)n	Simple_repeat	1	26	(0)	2433292
2336	11.5	0.0	0.6	chr22	20421295	20421608	(30396860)	C	AluSz	SINE/Alu	(0)	312	1	2433293
2268	10.5	0.3	0.7	chr22	20421818	20422123	(30396345)	C	AluSx1	SINE/Alu	(7)	305	1	2433294
11	11.5	10.0	2.3	chr22	20423791	20423830	(30394638)	+	(GGCAGGA)n	Simple_repeat	1	44	(0)	2433296
23	3.3	0.0	0.0	chr22	20428211	20428241	(30390227)	+	(CCTC)n	Simple_repeat	1	31	(0)	2433300
31	10.2	10.3	1.2	chr22	20428242	20428285	(30390183)	+	(TCTCC)n	Simple_repeat	4	86	(0)	2433301
2137	10.1	1.6	5.4	chr22	20428286	20428602	(30389866)	C	AluSp	SINE/Alu	(7)	306	2	2433302
11	15.4	8.9	2.0	chr22	20430862	20430906	(30387562)	+	(GGCCACT)n	Simple_repeat	1	49	(0)	2433305
12	31.0	0.0	1.9	chr22	20430944	20430996	(30387472)	+	(CCCCCCT)n	Simple_repeat	1	53	(0)	2433306
929	29.8	11.4	3.7	chr22	20434919	20435760	(30382708)	+	L2a	LINE/L2	2252	3208	(218)	2433311
234	32.2	11.4	3.2	chr22	20437106	20437385	(30381083)	+	L2b	LINE/L2	2931	3237	(150)	2433314
2109	12.4	1.7	1.0	chr22	20594278	20594576	(30223892)	+	AluSz	SINE/Alu	12	312	(0)	2433593
2223	12.3	0.0	0.0	chr22	20594598	20594897	(30223571)	+	AluSx	SINE/Alu	1	300	(12)	2433594
1513	14.6	12.2	0.4	chr22	20594898	20595150	(30223318)	+	AluJo	SINE/Alu	1	287	(25)	2433595
1701	13.9	4.2	0.4	chr22	20595699	20595950	(30222518)	C	AluJo	SINE/Alu	(48)	264	3	2433597
1142	24.8	1.6	5.5	chr22	20595957	20596284	(30222184)	C	L1M4c	LINE/L1	(5822)	562	248	2433598
1670	13.8	5.8	6.4	chr22	20617452	20617613	(30200855)	C	AluSc8	SINE/Alu	(16)	295	132	2433633
2234	12.3	0.3	0.0	chr22	20617614	20617922	(30200546)	C	AluSx3	SINE/Alu	(0)	311	2	2433634
1670	13.8	5.8	6.4	chr22	20617923	20618056	(30200412)	C	AluSc8	SINE/Alu	(180)	131	1	2433633
1948	17.0	0.3	0.0	chr22	20618117	20618410	(30200058)	C	AluSx	SINE/Alu	(17)	295	1	2433635
2369	10.5	0.0	1.0	chr22	20624735	20625047	(30193421)	+	AluSx3	SINE/Alu	1	310	(1)	2433645
18	3.4	10.0	0.0	chr22	20625050	20625079	(30193389)	+	(AC)n	Simple_repeat	1	33	(0)	2433646
2018	13.8	0.6	5.2	chr22	20628057	20628383	(30190085)	+	AluSz	SINE/Alu	1	312	(0)	2433654
54	23.0	1.4	1.9	chr22	20628386	20628515	(30189953)	+	GA-rich	Low_complexity	1	129	(0)	2433655
2532	5.8	0.7	0.0	chr22	20630070	20630364	(30188104)	C	AluY	SINE/Alu	(14)	297	1	2433657
1190	25.6	9.8	0.8	chr22	20642953	20643306	(30175162)	+	MLT1K	LTR/ERVL-MaLR	199	587	(8)	2433678
2596	4.1	0.0	0.3	chr22	20649576	20649870	(30168598)	C	AluY	SINE/Alu	(17)	294	1	2433698
2314	16.2	6.9	1.4	chr22	20655240	20655828	(30162640)	C	MER41-int	LTR/ERV1	(2717)	3229	2715	2433706
611	14.0	5.2	10.4	chr22	20655804	20655950	(30162518)	C	MER41-int	LTR/ERV1	(6109)	2011	1872	2433706
2424	9.7	0.3	0.0	chr22	20655951	20656259	(30162209)	C	AluSp	SINE/Alu	(1)	312	3	2433707
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
13432	11.8	2.6	1.7	chr22	20674853	20677098	(30141370)	C	L1PB	LINE/L1	(459)	5692	3454	2433724
2095	14.5	0.0	0.7	chr22	20677099	20677401	(30141067)	C	AluSz6	SINE/Alu	(9)	303	3	2433725
2454	9.1	0.0	0.0	chr22	20898932	20899240	(29919228)	C	AluY	SINE/Alu	(2)	309	1	2434165
2144	11.5	0.3	2.6	chr22	20901458	20901769	(29916699)	C	AluSp	SINE/Alu	(7)	306	2	2434173
1331	15.7	1.7	2.5	chr22	20901771	20901819	(29916649)	+	AluJb	SINE/Alu	68	116	(196)	2434172
44	2.4	0.0	0.0	chr22	20901820	20901861	(29916607)	+	(CA)n	Simple_repeat	1	42	(0)	2434174
1331	15.7	1.7	2.5	chr22	20901862	20902052	(29916416)	+	AluJb	SINE/Alu	117	306	(6)	2434172
1013	17.4	0.0	0.0	chr22	20960462	20960616	(29857852)	+	FRAM	SINE/Alu	2	156	(20)	2434331
325	32.5	7.5	1.9	chr22	20968268	20968446	(29850022)	+	MIRb	SINE/MIR	9	202	(66)	2434341
234	22.9	14.4	1.2	chr22	20968665	20968748	(29849720)	C	MIRc	SINE/MIR	(59)	209	113	2434342
296	31.3	8.1	6.4	chr22	20970223	20970278	(29848190)	C	MIRb	SINE/MIR	(59)	209	157	2434346
1889	15.8	1.9	2.9	chr22	20970279	20970446	(29848022)	C	AluJr	SINE/Alu	(4)	308	137	2434347
2299	11.5	0.0	1.0	chr22	20970447	20970760	(29847708)	C	AluSz6	SINE/Alu	(1)	311	1	2434348
2128	13.5	0.0	1.0	chr22	21023956	21024258	(29794210)	C	AluSx1	SINE/Alu	(12)	300	1	2434414
209	31.8	13.2	7.2	chr22	21025338	21025683	(29792785)	+	L2b	LINE/L2	2971	3340	(35)	2434418
1071	23.2	0.5	0.5	chr22	21054044	21054254	(29764214)	+	AluJr4	SINE/Alu	1	211	(101)	2434467
801	20.5	5.7	0.7	chr22	21065101	21065251	(29753217)	C	FRAM	SINE/Alu	(17)	159	1	2434496
452	22.6	4.2	4.9	chr22	21065252	21065292	(29753176)	+	LTR23	LTR/ERV1	390	434	(3)	2434492
13	0.0	0.0	0.0	chr22	21071493	21071509	(29746959)	+	(AGC)n	Simple_repeat	1	17	(0)	2434500
1107	19.4	11.2	5.0	chr22	21076401	21076683	(29741785)	C	AluJr4	SINE/Alu	(8)	304	2	2434508
695	18.6	4.9	5.8	chr22	21076684	21076722	(29741746)	C	Charlie5	DNA/hAT-Charlie	(190)	2434	2394	2434506
2005	13.4	4.3	0.0	chr22	21077620	21077790	(29740678)	C	AluSx	SINE/Alu	(8)	304	134	2434509
2074	13.4	1.0	0.0	chr22	21079806	21080097	(29738371)	C	AluSz	SINE/Alu	(17)	295	1	2434511
14	14.0	4.7	4.4	chr22	21080601	21080643	(29737825)	+	GA-rich	Low_complexity	1	45	(0)	2434515
1191	10.4	0.6	0.0	chr22	21087719	21087882	(29730586)	C	AluSq2	SINE/Alu	(12)	301	137	2434535
1710	9.7	0.3	18.6	chr22	21087886	21088246	(29730222)	C	AluSz	SINE/Alu	(17)	295	1	2434536
2452	7.0	0.0	1.0	chr22	21090349	21090646	(29727822)	+	AluSx1	SINE/Alu	1	295	(17)	2434544
968	24.9	7.5	5.0	chr22	21090647	21090899	(29727569)	+	HAL1ME	LINE/L1	1878	2141	(324)	2434542
1539	13.8	11.8	2.6	chr22	21092342	21092609	(29725859)	C	AluJb	SINE/Alu	(15)	297	2	2434548
278	31.7	0.0	0.0	chr22	21092801	21092882	(29725586)	+	L2c	LINE/L2	3246	3327	(60)	2434549
1661	14.9	0.0	9.5	chr22	21556426	21556761	(29261707)	C	AluJb	SINE/Alu	(8)	304	1	2435412
2150	10.5	1.3	0.0	chr22	21556778	21557073	(29261395)	+	AluSg	SINE/Alu	1	300	(10)	2435413
2491	6.4	0.0	0.3	chr22	22119705	22120002	(28698466)	+	AluY	SINE/Alu	1	297	(14)	2436499
5512	23.3	7.7	8.2	chr22	22122815	22125410	(28693058)	+	REP522	Satellite/telo	1	2582	(1255)	2436505
12698	5.0	0.5	1.0	chr22	22172779	22174704	(28643764)	C	L1PA5	LINE/L1	(0)	6154	4252	2436559
3990	19.2	2.8	0.5	chr22	22176209	22176973	(28641495)	+	LTR39	LTR/ERV1	1	783	(0)	2436562
17	14.2	0.0	0.0	chr22	22182411	22182441	(28636027)	+	(CTC)n	Simple_repeat	1	31	(0)	2436565
2290	11.7	0.0	0.0	chr22	22247972	22248280	(28570188)	+	AluSx1	SINE/Alu	1	309	(3)	2436664
24	22.7	1.2	4.7	chr22	22249758	22249841	(28568627)	+	A-rich	Low_complexity	1	85	(0)	2436667
21	7.5	0.0	0.0	chr22	22341308	22341335	(28477133)	+	(TC)n	Simple_repeat	1	28	(0)	2436771
26	9.1	0.0	0.0	chr22	22341336	22341371	(28477097)	+	(GT)n	Simple_repeat	1	36	(0)	2436772
8721	14.6	4.3	1.9	chr22	22359339	22361738	(28456730)	C	L1PB1	LINE/L1	(0)	6151	3590	2436786
346	30.2	4.0	5.6	chr22	22397875	22398052	(28420416)	C	L2b	LINE/L2	(18)	3408	3228	2436818
204	34.5	6.4	4.5	chr22	22398054	22398253	(28420215)	C	L2b	LINE/L2	(550)	2869	2666	2436818
1917	15.8	0.0	4.9	chr22	22402230	22402438	(28416030)	C	AluSz	SINE/Alu	(0)	312	116	2436821
2124	11.5	0.0	0.0	chr22	22402439	22402742	(28415726)	C	AluSc	SINE/Alu	(0)	309	1	2436822
1622	18.0	6.4	1.0	chr22	22571633	22571926	(28246542)	+	AluJr	SINE/Alu	1	311	(1)	2437098
56	20.8	1.1	6.6	chr22	22571927	22572105	(28246363)	+	A-rich	Low_complexity	1	181	(0)	2437099
264	18.0	6.2	6.2	chr22	22572221	22572285	(28246183)	+	HERV16-int	LTR/ERVL	1282	1346	(4321)	2437097
49	9.6	0.0	0.0	chr22	22623359	22623427	(28195041)	+	(AC)n	Simple_repeat	1	69	(0)	2437189
1175	14.5	0.0	0.0	chr22	22623446	22623611	(28194857)	C	AluSx1	SINE/Alu	(13)	299	134	2437190
2126	14.0	0.0	0.7	chr22	22623612	22623918	(28194550)	C	AluSx	SINE/Alu	(7)	305	1	2437191
446	23.1	6.5	0.0	chr22	22706119	22706304	(28112164)	+	Charlie5	DNA/hAT-Charlie	2426	2624	(0)	2437279
2405	7.4	0.0	2.6	chr22	22764833	22765143	(28053325)	C	AluY	SINE/Alu	(8)	303	1	2437357
810	30.6	11.2	4.3	chr22	22765144	22765274	(28053194)	C	ERVL-E-int	LTR/ERVL	(2810)	2857	2719	2437356
12	3.7	6.2	5.9	chr22	22907095	22907126	(27911342)	+	(TGTGTC)n	Simple_repeat	1	34	(0)	2437529
849	34.2	7.9	4.4	chr22	22908806	22909896	(27908572)	C	L1MC5	LINE/L1	(163)	9141	8010	2437532
1617	21.6	4.8	13.9	chr22	22924229	22924787	(27893681)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2437538
301	28.6	4.9	3.5	chr22	22927699	22927849	(27890619)	C	MIRb	SINE/MIR	(69)	199	46	2437543
34	7.5	0.0	0.0	chr22	22932697	22932739	(27885729)	+	(CA)n	Simple_repeat	1	43	(0)	2437550
557	31.9	18.5	1.5	chr22	23090180	23090953	(27727515)	+	L2a	LINE/L2	2466	3419	(7)	2437749
20	14.8	10.3	2.3	chr22	23095295	23095372	(27723096)	+	(AGCACACC)n	Simple_repeat	1	86	(0)	2437753
185	29.2	0.0	4.0	chr22	23102656	23102705	(27715763)	C	L3	LINE/CR1	(816)	3283	3236	2437758
266	36.7	7.9	0.0	chr22	23102791	23102918	(27715550)	C	L3	LINE/CR1	(1073)	3026	2888	2437758
82	30.7	3.3	1.6	chr22	26617569	26617931	(24200537)	+	(TCTC)n	Simple_repeat	1	375	(0)	2444766
26	0.0	0.0	0.0	chr22	29838204	29838228	(20980240)	+	(GCC)n	Simple_repeat	1	25	(0)	2451452
453	24.8	8.7	0.7	chr22	30356405	30356542	(20461926)	C	MER5A1	DNA/hAT-Charlie	(0)	166	17	2452430
345	30.6	5.9	0.0	chr22	30532279	30532422	(20286046)	+	MIRb	SINE/MIR	1	153	(115)	2452834
2251	7.0	0.4	2.1	chr22	30739821	30740144	(20078324)	C	AluSx	SINE/Alu	(0)	312	1	2453308
5210	7.6	2.3	2.5	chr22	30740145	30740667	(20077801)	C	LTR8	LTR/ERV1	(156)	535	2	2453307
2320	9.7	0.3	0.3	chr22	36479883	36480182	(14338286)	C	AluSq2	SINE/Alu	(13)	300	1	2465153
65	24.6	3.5	2.9	chr22	37212205	37212435	(13606033)	+	GA-rich	Low_complexity	1	239	(0)	2466724
212	30.7	10.7	0.0	chr22	37242846	37242920	(13575548)	+	MIR3	SINE/MIR	110	193	(15)	2466792
184	28.6	4.9	5.8	chr22	37553077	37553180	(13265288)	+	L2c	LINE/L2	3108	3210	(177)	2467508
14	21.3	2.6	0.0	chr22	38272954	38272991	(12545477)	+	(CGC)n	Simple_repeat	1	39	(0)	2469147
15	23.5	1.9	1.9	chr22	38273101	38273152	(12545316)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	2469148
12	19.3	4.7	2.2	chr22	38656630	38656672	(12161796)	+	(GGCAGGC)n	Simple_repeat	1	45	(0)	2470029
2253	11.8	0.3	0.0	chr22	39606528	39606831	(11211637)	C	AluSz	SINE/Alu	(7)	305	1	2472009
484	31.8	4.3	2.8	chr22	39606832	39606979	(11211489)	C	L3	LINE/CR1	(1049)	3050	2904	2472006
23	14.4	0.0	6.6	chr22	39947967	39948027	(10870441)	+	(CCTGATC)n	Simple_repeat	1	61	(0)	2472574
13	14.6	0.0	3.1	chr22	46934918	46934949	(3883519)	+	G-rich	Low_complexity	1	32	(0)	2486249
129	22.1	7.1	1.0	chr22	50628611	50629058	(189410)	+	(GT)n	Simple_repeat	1	480	(0)	2490988
544	27.2	0.0	0.0	chr3	3695286	3695399	(194600160)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2497857
1000	28.3	11.9	4.1	chr3	4739661	4740169	(193555390)	C	MLT1G1	LTR/ERVL-MaLR	(7)	572	19	2499522
1928	21.5	3.0	2.6	chr3	5115526	5115955	(193179604)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	36	2500243
33	19.9	1.2	2.4	chr3	5115956	5115997	(193179562)	+	(CTCCCT)n	Simple_repeat	1	42	(0)	2500244
60	4.4	1.4	0.0	chr3	5115998	5116068	(193179491)	+	(TTCC)n	Simple_repeat	1	72	(0)	2500245
33	19.9	1.2	2.4	chr3	5116069	5116107	(193179452)	+	(CTCCCT)n	Simple_repeat	1	39	(0)	2500246
539	12.7	0.0	0.0	chr3	5116109	5116179	(193179380)	C	AluSq10	SINE/Alu	(236)	77	7	2500247
39	14.6	2.5	0.0	chr3	5116188	5116262	(193179297)	+	(TTCCCC)n	Simple_repeat	1	77	(0)	2500248
2416	7.5	0.0	0.0	chr3	9645701	9645992	(188649567)	C	AluSq10	SINE/Alu	(21)	292	1	2507662
2145	11.8	0.0	1.0	chr3	9645993	9646120	(188649439)	C	AluSx1	SINE/Alu	(179)	133	8	2507661
1509	17.0	4.5	9.8	chr3	9646121	9646175	(188649384)	C	LTR54	LTR/ERV1	(134)	376	327	2507660
2402	7.7	0.0	2.6	chr3	9646176	9646486	(188649073)	C	AluY	SINE/Alu	(8)	303	1	2507663
2191	11.2	0.3	0.0	chr3	9648896	9649190	(188646369)	C	AluSz	SINE/Alu	(15)	297	2	2507671
51	42.1	3.9	0.8	chr3	9713213	9713722	(188581837)	+	(GGAT)n	Simple_repeat	1	530	(0)	2507791
2208	15.0	5.4	3.0	chr3	9844232	9844663	(188450896)	+	LTR8A	LTR/ERV1	1	443	(284)	2508088
2023	3.2	0.4	0.4	chr3	9844665	9844911	(188450648)	+	AluY	SINE/Alu	64	310	(1)	2508089
18	3.3	6.5	0.0	chr3	10191879	10191909	(188103650)	+	(AATG)n	Simple_repeat	1	33	(0)	2508885
54	0.0	3.8	0.0	chr3	10192024	10192076	(188103483)	+	(GT)n	Simple_repeat	1	55	(0)	2508886
83	18.2	3.2	5.0	chr3	11245902	11246153	(187049406)	+	(CTCACA)n	Simple_repeat	1	260	(0)	2511090
548	32.9	6.9	6.8	chr3	11757798	11758234	(186537325)	C	L2c	LINE/L2	(2)	3385	2934	2512032
2436	9.2	0.3	1.0	chr3	11758337	11758650	(186536909)	C	AluSx	SINE/Alu	(0)	312	1	2512033
295	33.6	5.7	5.0	chr3	12999058	12999241	(185296318)	+	MIR3	SINE/MIR	4	187	(21)	2514445
232	31.6	4.9	0.2	chr3	12999257	12999387	(185296172)	+	L3b	LINE/CR1	3897	3991	(108)	2514446
1991	9.9	0.0	0.0	chr3	13431300	13431571	(184863988)	C	AluSg4	SINE/Alu	(16)	294	23	2515224
1459	10.4	10.0	7.0	chr3	13431572	13431693	(184863866)	C	MER41A	LTR/ERV1	(175)	379	246	2515222
1123	10.6	3.0	0.0	chr3	13431694	13431854	(184863705)	+	AluSx1	SINE/Alu	137	302	(10)	2515225
184	13.8	0.0	0.0	chr3	13873629	13873657	(184421902)	C	L2a	LINE/L2	(91)	3335	3307	2516069
390	29.4	6.0	2.6	chr3	13873842	13874068	(184421491)	C	L2	LINE/L2	(455)	2964	2730	2516070
328	30.9	4.7	0.0	chr3	14232962	14233084	(184062475)	+	L3	LINE/CR1	3898	4026	(73)	2516500
55	0.0	0.0	0.0	chr3	14403078	14403124	(183892435)	+	(GT)n	Simple_repeat	1	47	(0)	2516884
23	31.8	1.0	3.0	chr3	14403274	14403371	(183892188)	+	(TG)n	Simple_repeat	1	99	(0)	2516885
263	33.8	8.4	5.3	chr3	14764234	14764383	(183531176)	+	L3	LINE/CR1	2680	2834	(1265)	2517561
16	22.1	0.0	0.0	chr3	16936519	16936550	(181359009)	+	A-rich	Low_complexity	1	32	(0)	2521224
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
110	16.8	5.7	1.1	chr3	19934289	19934551	(178361008)	+	(TC)n	Simple_repeat	1	278	(0)	2525330
10355	23.4	5.2	2.4	chr3	24661051	24663754	(173631805)	C	L1MA5A	LINE/L1	(3977)	2868	65	2532209
44478	4.7	0.4	0.8	chr3	33447027	33453275	(164842284)	+	HERV9NC-int	LTR/ERV1	1	6118	(0)	2545880
74	27.0	3.4	7.3	chr3	33885457	33885962	(164409597)	+	(GGT)n	Simple_repeat	1	523	(0)	2546623
44	2.4	0.0	0.0	chr3	33895153	33895194	(164400365)	+	(GT)n	Simple_repeat	1	42	(0)	2546637
35	0.0	0.0	0.0	chr3	33908627	33908656	(164386903)	+	(GT)n	Simple_repeat	1	30	(0)	2546664
46	5.4	0.0	0.0	chr3	33908657	33908714	(164386845)	+	(AG)n	Simple_repeat	1	58	(0)	2546665
212	28.0	1.3	2.6	chr3	33908867	33908943	(164386616)	C	MIR3	SINE/MIR	(38)	170	95	2546666
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
208	29.2	5.3	0.0	chr3	39152296	39152367	(159143192)	C	L2b	LINE/L2	(541)	2878	2803	2554040
12	33.5	1.4	2.7	chr3	39152612	39152685	(159142874)	+	(GTGTGG)n	Simple_repeat	1	75	(0)	2554041
972	19.9	12.4	1.8	chr3	39159756	39160123	(159135436)	C	L1ME4b	LINE/L1	(478)	414	106	2554058
440	34.6	8.3	2.2	chr3	39160175	39160223	(159135336)	C	L1M5	LINE/L1	(937)	5209	5161	2554059
1655	15.8	0.3	3.0	chr3	39160224	39160520	(159135039)	C	AluJo	SINE/Alu	(9)	303	15	2554060
2400	9.6	0.0	0.3	chr3	41254600	41254912	(157040647)	+	AluSx1	SINE/Alu	1	312	(0)	2557243
3794	25.7	3.3	7.4	chr3	41254913	41255129	(157040430)	+	L1MEf	LINE/L1	3481	3506	(3038)	2557242
56	39.8	2.0	0.3	chr3	42530265	42530564	(155764995)	+	(TGGA)n	Simple_repeat	1	306	(0)	2559259
2454	7.3	1.0	0.3	chr3	44517928	44518230	(153777329)	C	AluSp	SINE/Alu	(7)	306	2	2562239
666	13.9	1.0	1.0	chr3	44518237	44518338	(153777221)	+	MER74C	LTR/ERVL	1	102	(358)	2562240
1978	22.9	4.1	5.3	chr3	44518339	44518887	(153776672)	C	MER92B	LTR/ERV1	(94)	542	1	2562241
303	36.5	3.1	0.0	chr3	45037293	45037418	(153258141)	C	MIRc	SINE/MIR	(137)	131	2	2563097
19	7.2	0.0	0.0	chr3	45037442	45037471	(153258088)	+	(GTTTT)n	Simple_repeat	1	30	(0)	2563098
2498	7.1	0.0	0.0	chr3	45037473	45037782	(153257777)	C	AluY	SINE/Alu	(0)	311	2	2563099
236	30.4	3.8	1.0	chr3	45133937	45134039	(153161520)	+	MamRep1527	LTR	296	401	(568)	2563292
2260	6.4	6.3	0.0	chr3	45134142	45134423	(153161136)	C	AluY	SINE/Alu	(10)	301	1	2563293
1478	18.7	4.1	5.2	chr3	45999657	46000000	(152295559)	C	MER21A	LTR/ERVL	(3)	928	589	2564754
1121	18.9	26.6	0.7	chr3	46508869	46509177	(151786382)	C	MER47B	DNA/TcMar-Tigger	(0)	418	1	2565503
294	17.2	0.0	4.9	chr3	46509178	46509197	(151786362)	C	MLT2B2	LTR/ERVL	(43)	519	500	2565502
834	11.5	0.0	0.0	chr3	46509199	46509311	(151786248)	+	MER83	LTR/ERV1	1	113	(335)	2565504
1667	13.3	8.2	6.7	chr3	46509386	46509731	(151785828)	+	MER83	LTR/ERV1	97	448	(0)	2565504
184	34.2	3.8	1.3	chr3	46884978	46885054	(151410505)	C	MIRc	SINE/MIR	(126)	142	64	2566066
371	25.2	7.8	0.0	chr3	46885351	46885457	(151410102)	C	MIR	SINE/MIR	(10)	252	137	2566067
49	10.7	0.0	0.0	chr3	48087706	48087778	(150207781)	+	(CA)n	Simple_repeat	1	73	(0)	2568627
2213	10.9	1.4	0.0	chr3	49361601	49361893	(148933666)	+	AluSp	SINE/Alu	3	299	(14)	2571167
17	6.3	2.7	5.3	chr3	49724202	49724238	(148571321)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	2571830
813	4.6	6.9	0.9	chr3	52279087	52279195	(146016364)	C	AluSg	SINE/Alu	(152)	158	43	2575688
19	19.5	2.1	0.0	chr3	52533909	52533955	(145761604)	+	G-rich	Low_complexity	1	48	(0)	2575997
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
12	11.1	6.9	0.0	chr3	98584064	98584092	(99711467)	+	A-rich	Low_complexity	1	31	(0)	2639125
12	27.6	3.4	3.3	chr3	121752899	121752957	(76542602)	+	A-rich	Low_complexity	1	61	(0)	2670949
6394	16.4	5.7	1.9	chr3	121753139	121754548	(76541011)	+	L1MC2	LINE/L1	3928	5394	(752)	2670950
230	22.4	13.0	0.0	chr3	122383436	122383502	(75912057)	C	MIR3	SINE/MIR	(8)	200	124	2671933
200	32.3	6.9	8.7	chr3	124879045	124879251	(73416308)	+	L2	LINE/L2	2570	2772	(647)	2676020
462	23.3	0.1	0.0	chr3	128445327	128446393	(69849166)	+	(GGTGGT)n	Simple_repeat	1	1068	(0)	2681742
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
115	37.2	0.0	0.5	chr3	130236424	130236850	(68058709)	+	(CAC)n	Simple_repeat	1	427	(0)	2685214
2395	6.8	0.7	1.3	chr3	138832546	138832854	(59462705)	+	AluSp	SINE/Alu	1	307	(6)	2698262
1877	12.9	0.0	4.0	chr3	138832855	138833023	(59462536)	+	AluSx	SINE/Alu	136	294	(18)	2698261
318	22.1	0.0	6.9	chr3	138875617	138875718	(59419841)	+	L2a	LINE/L2	3332	3426	(0)	2698396
290	31.2	0.9	1.8	chr3	138875928	138876041	(59419518)	C	CR1-3_Croc	LINE/CR1	(1636)	1969	1857	2698397
128	18.9	3.9	3.1	chr3	141804823	141805143	(56490416)	+	(ACACAT)n	Simple_repeat	1	326	(0)	2702886
322	32.5	13.8	3.0	chr3	141805152	141805319	(56490240)	+	L2c	LINE/L2	3186	3386	(1)	2702887
180	27.4	3.8	0.0	chr3	141805298	141805348	(56490211)	C	L3b	LINE/CR1	(260)	4972	4920	2702888
199	25.5	4.0	7.5	chr3	141805345	141805453	(56490106)	C	L2c	LINE/L2	(2)	3373	3258	2702889
2259	9.2	0.0	0.0	chr3	141848850	141849157	(56446402)	C	AluSz	SINE/Alu	(0)	312	1	2703000
254	34.0	16.9	3.9	chr3	142583485	142583657	(55711902)	+	L2	LINE/L2	1906	2082	(1337)	2704351
3870	10.2	3.6	0.0	chr3	142583658	142584166	(55711393)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	2704352
3869	18.2	3.3	4.6	chr3	143084616	143085413	(55210146)	C	MER54A	LTR/ERVL	(126)	775	1	2705164
71	19.6	1.3	0.6	chr3	143183744	143183897	(55111662)	+	GA-rich	Low_complexity	1	156	(0)	2705317
1158	31.7	3.9	1.5	chr3	143189190	143189592	(55105967)	+	L2a	LINE/L2	289	701	(2718)	2705326
15	20.2	4.8	4.6	chr3	148991651	148991712	(49303847)	+	(CCG)n	Simple_repeat	1	65	(0)	2712870
260	31.8	8.5	1.3	chr3	149151791	149151943	(49143616)	C	Tigger16b	DNA/TcMar-Tigger	(0)	336	172	2713138
198	27.9	7.6	0.0	chr3	150733838	150733898	(47561661)	C	L2b	LINE/L2	(17)	3358	3293	2715762
1281	13.3	5.8	0.0	chr3	151504627	151504836	(46790723)	+	MER57B1	LTR/ERV1	1	223	(178)	2716875
1878	9.2	0.0	0.4	chr3	151504854	151505114	(46790445)	C	THE1C-int	LTR/ERVL-MaLR	(1369)	262	3	2716876
1945	18.5	4.3	4.9	chr3	151725761	151726249	(46569310)	C	L1MB4	LINE/L1	(1)	6179	5694	2717183
3129	20.2	0.8	6.4	chr3	151726255	151726631	(46568928)	C	L1MB4	LINE/L1	(2734)	3412	3037	2717183
808	18.6	0.0	2.9	chr3	153081417	153081556	(45214003)	+	AluJo	SINE/Alu	1	136	(176)	2719182
2246	12.6	1.3	0.0	chr3	153081580	153081880	(45213679)	+	AluSz	SINE/Alu	1	305	(7)	2719183
320	36.6	2.4	1.2	chr3	153220093	153220255	(45075304)	+	L2a	LINE/L2	2969	3133	(293)	2719452
15	18.3	2.4	2.4	chr3	153220359	153220399	(45075160)	+	(TCCC)n	Simple_repeat	1	42	(0)	2719454
21	24.6	3.9	2.5	chr3	153220381	153220458	(45075101)	+	(CTTT)n	Simple_repeat	1	81	(0)	2719455
226	35.4	6.6	0.9	chr3	153220466	153220579	(45074980)	+	L2a	LINE/L2	3266	3386	(1)	2719452
3495	8.7	0.4	0.0	chr3	155282777	155283245	(43012314)	C	LTR7C	LTR/ERV1	(0)	471	1	2722264
35	11.8	1.8	0.0	chr3	169147711	169147766	(29147793)	+	(GT)n	Simple_repeat	1	57	(0)	2740986
395	34.6	8.7	2.9	chr3	170730348	170730585	(27564974)	+	L2b	LINE/L2	2936	3188	(187)	2743507
33	12.9	0.0	0.0	chr3	170868804	170868854	(27426705)	+	(A)n	Simple_repeat	1	51	(0)	2743737
1897	12.2	2.6	0.0	chr3	170868867	170869128	(27426431)	+	AluSx	SINE/Alu	29	297	(15)	2743738
307	32.8	12.8	3.4	chr3	172841054	172841141	(25454418)	C	HAL1ME	LINE/L1	(2116)	349	240	2746786
70	6.9	0.0	1.1	chr3	172841142	172841235	(25454324)	+	(TCCT)n	Simple_repeat	1	94	(0)	2746787
307	32.8	12.8	3.4	chr3	172841236	172841351	(25454208)	C	HAL1ME	LINE/L1	(2226)	239	123	2746786
11099	11.8	3.6	3.3	chr3	173012124	173013370	(25282189)	+	L1PA16	LINE/L1	4332	5596	(570)	2747010
4984	5.0	3.0	1.1	chr3	173013371	173014032	(25281527)	C	LTR76	LTR/ERV1	(0)	675	1	2747013
202	29.2	7.7	6.8	chr3	184154877	184154979	(14140580)	C	L2c	LINE/L2	(7)	3380	3277	2764119
22	32.0	1.0	2.0	chr3	184155299	184155395	(14140164)	+	G-rich	Low_complexity	1	98	(0)	2764120
12	14.9	6.0	5.7	chr3	184569120	184569169	(13726390)	+	G-rich	Low_complexity	1	53	(0)	2764921
20	21.6	0.0	3.5	chr3	184569184	184569240	(13726319)	+	(GGCG)n	Simple_repeat	1	57	(0)	2764922
242	25.9	1.1	1.4	chr3	186355107	186355693	(11939866)	+	(CCA)n	Simple_repeat	1	588	(0)	2768203
393	14.3	3.1	0.0	chr3	196047770	196047832	(2247727)	+	MER33	DNA/hAT-Charlie	17	81	(243)	2784089
1002	15.3	1.3	0.0	chr3	196047869	196048018	(2247541)	+	AluSz6	SINE/Alu	148	299	(13)	2784090
1913	14.1	0.7	1.3	chr3	196141756	196142034	(2153525)	+	AluSz	SINE/Alu	7	285	(27)	2784329
30	3.5	0.0	0.0	chr3	196142035	196142064	(2153495)	+	(AG)n	Simple_repeat	1	30	(0)	2784330
1913	14.1	0.7	1.3	chr3	196142065	196142089	(2153470)	+	AluSz	SINE/Alu	286	309	(3)	2784329
14	21.4	2.4	2.3	chr3	196142090	196142131	(2153428)	+	GA-rich	Low_complexity	1	43	(0)	2784331
1661	12.8	0.3	9.1	chr3	196217251	196217570	(2077989)	+	AluJb	SINE/Alu	20	311	(1)	2784519
48	14.8	5.8	5.5	chr3	196217571	196217725	(2077834)	+	GA-rich	Low_complexity	1	164	(0)	2784520
1423	8.7	0.0	1.1	chr3	197739227	197739411	(556148)	+	AluYh3	SINE/Alu	119	301	(10)	2787432
2325	4.1	0.0	7.9	chr3	197739412	197739726	(555833)	+	AluY	SINE/Alu	1	290	(21)	2787433
77	29.1	3.4	0.0	chr4	790806	791071	(189423484)	+	(CT)n	Simple_repeat	1	275	(0)	2789526
118	26.8	0.6	0.9	chr4	822125	822523	(189392032)	+	(TCTCTC)n	Simple_repeat	1	397	(0)	2789579
497	30.5	0.6	0.6	chr4	1514072	1515491	(188699064)	+	(GATGAT)n	Simple_repeat	1	1428	(0)	2790273
180	3.7	0.0	0.0	chr4	1809460	1809486	(188405069)	C	L2c	LINE/L2	(227)	3160	3134	2790623
25	6.0	2.9	0.0	chr4	1872557	1872591	(188341964)	+	(GT)n	Simple_repeat	1	36	(0)	2790726
53	0.0	0.0	0.0	chr4	1872592	1872636	(188341919)	+	(GA)n	Simple_repeat	1	45	(0)	2790727
302	20.2	4.8	11.6	chr4	1882928	1882947	(188331608)	+	MLT1I	LTR/ERVL-MaLR	398	409	(2)	2790751
226	33.9	3.9	5.1	chr4	1882948	1883183	(188331372)	C	L2b	LINE/L2	(681)	2738	2506	2790750
351	23.3	3.2	0.0	chr4	2395852	2395941	(187818614)	C	MER20	DNA/hAT-Charlie	(5)	214	122	2791500
413	27.4	8.1	0.5	chr4	3660502	3660717	(186553838)	+	MER89	LTR/ERV1	1	234	(325)	2793441
99	3.9	4.0	4.9	chr4	3660718	3660893	(186553662)	+	(TG)n	Simple_repeat	1	183	(0)	2793442
17	13.7	0.0	0.0	chr4	3660895	3660926	(186553629)	+	(TGACCC)n	Simple_repeat	1	32	(0)	2793443
402	19.5	2.4	0.9	chr4	6578916	6579798	(183634757)	+	(CCATCA)n	Simple_repeat	1	904	(0)	2798655
184	26.8	2.7	7.8	chr4	6753399	6753475	(183461080)	+	MIRb	SINE/MIR	116	188	(80)	2799018
15	21.7	3.5	3.4	chr4	8303671	8303727	(181910828)	+	(TCTG)n	Simple_repeat	1	59	(0)	2801560
31	0.0	0.0	0.0	chr4	8303901	8303929	(181910626)	+	(CATC)n	Simple_repeat	1	29	(0)	2801561
512	19.8	2.3	0.6	chr4	8841736	8842838	(181371717)	+	(TGGTGA)n	Simple_repeat	1	1128	(0)	2802351
155	22.6	3.5	0.9	chr4	9980962	9981367	(180233188)	+	(TGATGG)n	Simple_repeat	1	420	(0)	2804004
1568	20.4	6.3	0.7	chr4	25050467	25050900	(165163655)	C	LTR43	LTR/ERV1	(2)	763	127	2828185
307	15.7	0.0	0.0	chr4	25051003	25051053	(165163502)	C	LTR43	LTR/ERV1	(714)	51	1	2828185
62	18.3	3.0	4.1	chr4	38281775	38281941	(151932614)	+	(CCT)n	Simple_repeat	1	172	(0)	2847527
20	35.0	6.1	0.0	chr4	38328617	38328666	(151885889)	+	(TCTC)n	Simple_repeat	1	53	(0)	2847594
41	0.0	0.0	0.0	chr4	38328667	38328704	(151885851)	+	(TTCC)n	Simple_repeat	1	38	(0)	2847595
20	35.0	6.1	0.0	chr4	38328705	38328801	(151885754)	+	(TCTC)n	Simple_repeat	2	104	(0)	2847596
55	0.0	0.0	0.0	chr4	38328821	38328867	(151885688)	+	(TG)n	Simple_repeat	1	47	(0)	2847597
263	6.5	0.0	0.0	chr4	38328870	38328900	(151885655)	C	U2	snRNA	(152)	36	6	2847598
678	19.2	0.1	0.2	chr4	38733105	38734383	(151480172)	+	(GGT)n	Simple_repeat	1	1280	(0)	2848314
26	6.3	0.0	0.0	chr4	40055708	40055741	(150158814)	+	(ACC)n	Simple_repeat	1	34	(0)	2851168
355	24.5	2.1	1.1	chr4	40515636	40515730	(149698825)	+	MIRc	SINE/MIR	50	145	(123)	2852179
2805	12.1	7.3	4.7	chr4	42179092	42179767	(148034788)	C	MER51A	LTR/ERV1	(9)	625	1	2855197
13	23.3	0.0	2.4	chr4	48269813	48269854	(141944701)	+	(GAGCCCA)n	Simple_repeat	1	42	(0)	2863589
22	31.4	3.0	2.9	chr4	48269850	48269981	(141944574)	+	(CGCCC)n	Simple_repeat	1	136	(0)	2863590
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
20	20.2	3.8	1.8	chr4	52418848	52418900	(137795655)	+	(CA)n	Simple_repeat	1	55	(0)	2866164
30	18.5	1.6	0.0	chr4	52418953	52419013	(137795542)	+	(CA)n	Simple_repeat	1	62	(0)	2866164
26	18.9	1.9	0.0	chr4	52419085	52419138	(137795417)	+	(CA)n	Simple_repeat	1	55	(0)	2866165
610	11.7	17.9	0.0	chr4	52714634	52714761	(137499794)	+	MSTA	LTR/ERVL-MaLR	37	192	(236)	2866620
805	14.5	1.6	0.0	chr4	52714767	52714890	(137499665)	+	AluJb	SINE/Alu	1	126	(186)	2866621
4187	5.8	4.3	0.0	chr4	67552082	67552636	(122661919)	C	LTR19B	LTR/ERV1	(0)	580	1	2887116
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
12276	11.7	3.1	1.3	chr4	71856267	71857844	(118356711)	C	MER4B-int	LTR/ERV1	(0)	6758	5081	2892753
3240	9.4	0.6	5.7	chr4	71857845	71858351	(118356204)	+	LTR21A	LTR/ERV1	1	481	(0)	2892754
659	27.5	0.9	2.4	chr4	73036748	73036962	(117177593)	+	LTR27D	LTR/ERV1	5	223	(906)	2894275
1702	23.1	5.1	0.2	chr4	73037053	73037469	(117177086)	+	LTR27D	LTR/ERV1	207	613	(2)	2894275
25	22.1	6.3	4.4	chr4	76949773	76949899	(113264656)	+	(AGCCGG)n	Simple_repeat	1	135	(0)	2900137
14	16.4	2.9	0.0	chr4	84965922	84965955	(105248600)	+	(CCGACC)n	Simple_repeat	1	35	(0)	2911909
17	22.6	4.1	4.0	chr4	87811396	87811468	(102403087)	+	GA-rich	Low_complexity	1	76	(0)	2916082
15	26.6	0.0	0.0	chr4	102345350	102345394	(87869161)	+	(CTGT)n	Simple_repeat	1	45	(0)	2935547
2032	13.5	5.1	1.6	chr4	109395781	109396103	(80818452)	+	MER1B	DNA/hAT-Charlie	5	339	(0)	2944870
18	20.1	0.0	5.3	chr4	109703447	109703455	(80511100)	+	(GGCCCC)n	Simple_repeat	1	27	(30)	2945395
12	18.1	2.4	4.8	chr4	109703456	109703496	(80511059)	+	(GCCCC)n	Simple_repeat	1	42	(0)	2945396
3946	14.7	3.9	3.6	chr4	110248492	110249142	(79965413)	C	LTR62	LTR/ERVL	(1)	708	48	2946273
2100	12.6	1.0	0.3	chr4	110249143	110249435	(79965120)	C	AluSg4	SINE/Alu	(15)	295	1	2946274
1220	19.2	14.4	0.0	chr4	118277837	118278158	(71936397)	C	L1MC3	LINE/L1	(0)	7785	7410	2956657
1885	11.3	0.0	0.0	chr4	118278166	118278404	(71936151)	C	AluSz	SINE/Alu	(73)	239	1	2956658
4252	17.1	5.9	3.2	chr4	122775712	122776580	(67437975)	C	MER54A	LTR/ERVL	(7)	894	1	2963003
6578	17.5	10.9	4.6	chr4	126955323	126956872	(63257683)	+	MER52A	LTR/ERV1	1	1755	(0)	2968477
1595	30.2	13.2	1.6	chr4	137905539	137906272	(52308283)	C	L2a	LINE/L2	(478)	2941	2110	2982248
325	28.2	2.8	0.0	chr4	137906284	137906386	(52308169)	C	L1MEd	LINE/L1	(5946)	1140	1035	2982249
917	21.5	4.8	9.5	chr4	139214206	139214488	(51000067)	C	MLT1B	LTR/ERVL-MaLR	(121)	269	1	2984188
2905	15.4	5.7	4.8	chr4	143854522	143855126	(46359429)	C	LTR36	LTR/ERV1	(0)	611	1	2990840
53	19.4	3.4	6.0	chr4	144016306	144016484	(46198071)	+	(TTCC)n	Simple_repeat	1	185	(0)	2991069
212	24.0	11.8	7.4	chr4	144016487	144016567	(46197988)	C	L2a	LINE/L2	(6)	3420	3336	2991070
2808	15.6	6.4	4.8	chr4	144078627	144079227	(46135328)	C	LTR36	LTR/ERV1	(0)	611	1	2991157
315	16.5	4.8	0.0	chr4	144104542	144104620	(46109935)	C	L1MB4	LINE/L1	(1)	6179	6097	2991194
548	18.7	1.3	6.9	chr4	144104622	144104785	(46109770)	C	L1PA8	LINE/L1	(257)	6040	5880	2991193
49	23.7	2.8	4.9	chr4	144137666	144137843	(46076712)	+	(TTCC)n	Simple_repeat	1	183	(0)	2991246
224	22.7	11.8	7.4	chr4	144137846	144137926	(46076629)	C	L2a	LINE/L2	(6)	3420	3336	2991247
4364	15.1	3.2	1.8	chr4	163195102	163195866	(27018689)	C	LTR19C	LTR/ERV1	(0)	779	4	3017697
350	36.8	4.9	3.4	chr4	172998488	172998808	(17215747)	+	L2	LINE/L2	1864	2189	(1230)	3030997
139	11.6	2.2	4.3	chr4	173416889	173417164	(16797391)	+	(CA)n	Simple_repeat	1	282	(0)	3031589
78	0.0	0.0	0.0	chr4	183399075	183399143	(6815412)	+	(ACATA)n	Simple_repeat	1	69	(0)	3044871
32	3.7	1.5	8.8	chr4	183407631	183407697	(6806858)	+	(TCTTT)n	Simple_repeat	1	68	(0)	3044895
465	32.2	9.5	6.6	chr4	183407704	183408082	(6806473)	C	L1MC4	LINE/L1	(4879)	1336	946	3044896
206	31.9	1.4	0.0	chr4	188061117	188061188	(2153367)	C	L2c	LINE/L2	(226)	3161	3089	3051915
591	24.6	8.2	0.0	chr4	188061365	188061555	(2153000)	C	L1MC	LINE/L1	(2362)	5520	5313	3051918
78	30.5	0.4	0.4	chr5	190314	190562	(181347697)	+	(CTCT)n	Simple_repeat	1	250	(0)	3055130
114	19.9	0.8	0.8	chr5	1160101	1160344	(180377915)	+	GA-rich	Low_complexity	1	246	(0)	3055998
284	29.2	1.4	0.8	chr5	1388279	1389151	(180149108)	+	(CCAT)n	Simple_repeat	1	885	(0)	3056207
38	4.6	0.0	0.0	chr5	1433925	1433969	(180104290)	+	(CCATCCACAG)n	Simple_repeat	1	45	(0)	3056238
138	17.8	3.8	1.2	chr5	6681681	6681994	(174856265)	+	(GT)n	Simple_repeat	1	326	(0)	3062173
40	25.7	2.9	7.5	chr5	10307850	10308095	(171230164)	+	G-rich	Low_complexity	1	253	(0)	3066658
60	27.0	0.6	2.2	chr5	10530775	10530951	(171007308)	+	(TG)n	Simple_repeat	1	178	(0)	3067078
1576	19.1	10.4	0.9	chr5	10539801	10540138	(170998121)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3067095
22	20.0	3.0	2.9	chr5	16936307	16936373	(164601886)	+	(CCCG)n	Simple_repeat	1	69	(0)	3075812
2472	7.7	0.0	0.0	chr5	27220349	27220658	(154317601)	C	AluY	SINE/Alu	(1)	310	1	3089597
300	35.7	7.3	2.5	chr5	29993334	29993695	(151544564)	C	L2	LINE/L2	(974)	2445	2065	3093107
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
5707	11.0	2.5	3.0	chr5	38797352	38798192	(142740067)	C	LTR1A2	LTR/ERV1	(0)	837	1	3106688
1549	15.7	6.2	3.9	chr5	42908845	42909175	(138629084)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3112242
3541	9.2	1.3	0.6	chr5	43320823	43321290	(138216969)	C	LTR7C	LTR/ERV1	(0)	471	1	3112925
12	21.3	2.5	2.4	chr5	56037558	56037597	(125500662)	+	GA-rich	Low_complexity	1	41	(0)	3124327
14	4.3	0.0	7.1	chr5	56161999	56162026	(125376233)	+	(CTTT)n	Simple_repeat	1	28	(0)	3124591
973	22.4	15.9	4.9	chr5	56162274	56162601	(125375658)	+	LTR33	LTR/ERVL	1	371	(144)	3124592
329	32.5	7.3	3.4	chr5	56289064	56289327	(125248932)	+	L2c	LINE/L2	2640	2914	(505)	3124803
43	3.9	3.8	0.0	chr5	66344955	66345007	(115193252)	+	(GT)n	Simple_repeat	1	55	(0)	3139307
284	17.3	1.9	0.0	chr5	66345018	66345069	(115193190)	+	MER5A	DNA/hAT-Charlie	132	184	(5)	3139308
2855	16.8	9.4	5.0	chr5	71586451	71587046	(109951213)	C	MER51A	LTR/ERV1	(9)	625	1	3147717
3391	11.0	0.5	0.0	chr5	95709910	95710748	(85827511)	C	HERVS71-int	LTR/ERV1	(3305)	5673	4803	3181554
87	0.0	0.0	0.0	chr5	96808188	96808261	(84729998)	+	(GT)n	Simple_repeat	1	74	(0)	3183133
18	12.0	0.0	0.0	chr5	96808270	96808296	(84729963)	+	(T)n	Simple_repeat	1	27	(0)	3183134
11	16.7	5.9	0.0	chr5	111512568	111512601	(70025658)	+	(CCCAGCC)n	Simple_repeat	1	36	(0)	3201527
1676	25.8	7.8	2.9	chr5	122862972	122863516	(58674743)	C	L2a	LINE/L2	(0)	3426	2885	3216571
1727	17.5	0.3	9.8	chr5	122863517	122863854	(58674405)	C	AluJb	SINE/Alu	(6)	306	1	3216572
1773	17.2	7.6	5.4	chr5	126514727	126515151	(55023108)	C	MER54B	LTR/ERVL	(358)	435	1	3221317
463	28.9	1.4	0.7	chr5	126515186	126515328	(55022931)	C	MER21C	LTR/ERVL	(777)	161	18	3221313
19	29.5	0.9	5.7	chr5	131855401	131855505	(49682754)	+	(ACAG)n	Simple_repeat	1	106	(0)	3228638
36	21.5	6.1	4.6	chr5	131855537	131855699	(49682560)	+	GA-rich	Low_complexity	1	173	(0)	3228639
35	0.0	0.0	0.0	chr5	134371474	134371505	(47166754)	+	(CGG)n	Simple_repeat	1	32	(0)	3232422
278	35.0	5.7	0.5	chr5	135134317	135134500	(46403759)	+	L3	LINE/CR1	3754	3947	(152)	3233930
129	31.1	1.8	0.6	chr5	135481825	135482282	(46055977)	+	(GT)n	Simple_repeat	1	466	(0)	3234355
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
1192	18.0	4.5	0.5	chr5	138469469	138469662	(43068597)	C	AluJb	SINE/Alu	(26)	286	85	3238922
237	16.2	0.0	0.0	chr5	138469763	138469799	(43068460)	C	MER77B	LTR/ERVL	(282)	418	382	3238923
299	27.8	14.2	1.2	chr5	138470322	138470492	(43067767)	C	L2c	LINE/L2	(104)	3283	3087	3238924
15	24.6	0.0	2.5	chr5	139752197	139752236	(41786023)	+	(TC)n	Simple_repeat	1	40	(0)	3241446
17	34.5	1.1	3.3	chr5	139752434	139752522	(41785737)	+	(AC)n	Simple_repeat	1	90	(0)	3241447
17	31.4	0.0	3.0	chr5	139755551	139755616	(41782643)	+	(TG)n	Simple_repeat	1	66	(0)	3241458
37	0.0	0.0	0.0	chr5	139755636	139755667	(41782592)	+	(TG)n	Simple_repeat	1	32	(0)	3241458
1319	28.5	8.7	3.8	chr5	140309431	140310242	(41228017)	C	L2a	LINE/L2	(4)	3422	2557	3242349
46	6.0	0.0	0.0	chr5	140648008	140648060	(40890199)	+	(GT)n	Simple_repeat	1	53	(0)	3242991
371	30.6	5.8	7.7	chr5	140648156	140648448	(40889811)	+	L2c	LINE/L2	3035	3356	(19)	3242992
1423	28.4	13.1	3.7	chr5	148639077	148639617	(32898642)	+	L2a	LINE/L2	2646	3246	(180)	3256198
728	22.9	0.0	5.9	chr5	149456446	149456615	(32081644)	+	AluJo	SINE/Alu	138	297	(15)	3257778
65	20.1	3.0	1.8	chr5	149456635	149456799	(32081460)	+	GA-rich	Low_complexity	1	170	(0)	3257779
263	21.7	6.7	2.4	chr5	149456800	149456884	(32081375)	+	MER103C	DNA/hAT-Charlie	139	227	(70)	3257780
240	30.8	0.0	0.0	chr5	149457038	149457102	(32081157)	C	MER102c	DNA/hAT-Charlie	(144)	187	123	3257781
294	31.2	12.5	0.7	chr5	151157894	151158048	(30380211)	C	MIR3	SINE/MIR	(3)	205	30	3261276
254	34.9	5.2	0.0	chr5	153742128	153742236	(27796023)	C	L2b	LINE/L2	(189)	3186	3072	3265814
395	30.7	3.5	0.7	chr5	153742374	153742384	(27795875)	C	MIR	SINE/MIR	(104)	158	146	3265815
1937	27.0	8.2	3.9	chr5	153742385	153742981	(27795278)	C	MLT1E2	LTR/ERVL-MaLR	(2)	625	1	3265816
197	28.6	9.5	3.7	chr5	154653888	154653996	(26884263)	C	MIR3	SINE/MIR	(77)	131	16	3267691
61	3.4	0.0	0.0	chr5	160197922	160197982	(21340277)	+	(GT)n	Simple_repeat	1	61	(0)	3277630
27	25.1	5.5	3.6	chr5	160197983	160198009	(21340250)	+	GA-rich	Low_complexity	1	55	(70)	3277631
19	14.8	0.0	9.4	chr5	160198010	160198073	(21340186)	+	G-rich	Low_complexity	1	64	(0)	3277632
27	25.1	5.5	3.6	chr5	160198074	160198105	(21340154)	+	GA-rich	Low_complexity	56	125	(0)	3277631
3640	16.6	5.8	1.4	chr5	168477060	168477748	(13060511)	+	MER72	LTR/ERV1	1	721	(1)	3290137
60	28.1	4.7	1.7	chr5	172707629	172707902	(8830357)	+	(GAGTGT)n	Simple_repeat	1	287	(0)	3298018
28	2.9	2.8	0.0	chr5	172707908	172707943	(8830316)	+	(AG)n	Simple_repeat	1	37	(0)	3298019
132	24.5	0.3	0.9	chr5	172787127	172787448	(8750811)	+	(CA)n	Simple_repeat	1	323	(0)	3298194
388	23.4	1.4	2.5	chr5	173810548	173811575	(7726684)	+	(TGGTGA)n	Simple_repeat	1	1042	(0)	3300340
548	31.3	10.2	5.4	chr5	177445441	177445757	(4092502)	+	MLT1K	LTR/ERVL-MaLR	207	540	(55)	3307430
303	29.3	7.4	0.0	chr5	177445760	177445834	(4092425)	C	L1MEd	LINE/L1	(5027)	2059	1979	3307431
875	14.8	0.0	0.0	chr5	177445843	177445964	(4092295)	C	AluSz6	SINE/Alu	(0)	312	191	3307432
187	26.7	7.7	0.0	chr5	178127662	178127721	(3410538)	C	L2b	LINE/L2	(24)	3351	3287	3308606
2288	11.1	0.0	3.7	chr5	178127741	178128064	(3410195)	C	AluSx1	SINE/Alu	(0)	312	1	3308607
467	15.7	0.0	1.2	chr5	178449142	178449225	(3089034)	+	MLT1A1	LTR/ERVL-MaLR	324	406	(2)	3309190
121	15.5	0.5	0.0	chr5	180670182	180670389	(867870)	+	(GTGTGT)n	Simple_repeat	1	209	(0)	3313068
345	17.0	0.0	1.1	chr5	180670390	180670484	(867775)	+	PRIMA4-int	LTR/ERV1	488	581	(7689)	3313069
1037	20.8	10.3	3.4	chr5	180873772	180874188	(664071)	+	MLT2B4	LTR/ERVL	1	414	(0)	3313386
497	6.7	0.0	0.0	chr5	180874249	180874308	(663951)	C	FLAM_A	SINE/Alu	(63)	79	20	3313387
4377	16.9	14.6	3.1	chr5	181069831	181070864	(467395)	C	MER52C	LTR/ERV1	(105)	1173	1	3313602
16148	15.6	6.0	2.7	chr6	921339	924118	(169881861)	+	HUERS-P2-int	LTR/ERV1	210	3088	(0)	3315399
5331	11.6	4.1	3.0	chr6	924119	924946	(169881033)	+	LTR1A2	LTR/ERV1	1	837	(0)	3315399
19	11.2	0.0	0.0	chr6	2917241	2917269	(167888710)	+	(AC)n	Simple_repeat	1	29	(0)	3318105
1651	23.9	11.1	1.2	chr6	2989587	2990082	(167815897)	C	LTR73	LTR/ERV1	(21)	551	1	3318211
398	32.3	6.2	2.6	chr6	3658007	3658270	(167147709)	C	L2c	LINE/L2	(196)	3191	2918	3319243
1520	17.5	9.1	2.6	chr6	3658292	3658672	(167147307)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3319244
19	9.7	2.9	2.8	chr6	6522047	6522081	(164283898)	+	GA-rich	Low_complexity	1	36	(0)	3323513
56	30.8	0.6	0.6	chr6	6522172	6522348	(164283631)	+	(CA)n	Simple_repeat	1	178	(0)	3323514
136	29.9	0.7	0.2	chr6	6746973	6747376	(164058603)	+	(CA)n	Simple_repeat	1	407	(0)	3323841
67	24.6	2.2	1.1	chr6	6800403	6800587	(164005392)	+	(TC)n	Simple_repeat	1	189	(0)	3323936
53	0.0	0.0	0.0	chr6	6800590	6800634	(164005345)	+	(CA)n	Simple_repeat	1	45	(0)	3323937
16	28.2	2.6	2.6	chr6	6956553	6956628	(163849351)	+	(CTCTCCA)n	Simple_repeat	1	78	(0)	3324276
792	14.8	0.0	1.6	chr6	7078862	7078983	(163726996)	+	FLAM_C	SINE/Alu	3	122	(21)	3324554
55	18.8	2.4	5.8	chr6	7078989	7079156	(163726823)	+	GA-rich	Low_complexity	1	172	(0)	3324555
2299	11.2	0.0	0.0	chr6	7079194	7079498	(163726481)	+	AluSx1	SINE/Alu	1	305	(7)	3324556
760	17.3	0.8	2.4	chr6	7099042	7099168	(163706811)	C	FLAM_A	SINE/Alu	(17)	125	1	3324605
866	16.9	1.5	0.0	chr6	7259749	7259878	(163546101)	+	FLAM_A	SINE/Alu	1	132	(10)	3324838
17	14.1	2.4	2.4	chr6	11688061	11688101	(159117878)	+	(CTCT)n	Simple_repeat	1	42	(0)	3331590
49	2.2	0.0	0.0	chr6	11688102	11688147	(159117832)	+	(TG)n	Simple_repeat	1	46	(0)	3331591
2258	10.7	0.7	0.3	chr6	11926231	11926529	(158879450)	+	AluSz	SINE/Alu	3	302	(10)	3331920
28	1.9	8.3	4.6	chr6	11926531	11926590	(158879389)	+	(GAAGA)n	Simple_repeat	1	65	(0)	3331921
900	11.6	3.0	0.0	chr6	11926591	11926719	(158879260)	+	AluSx3	SINE/Alu	175	307	(4)	3331922
77	19.0	3.2	2.0	chr6	11926727	11926915	(158879064)	+	GA-rich	Low_complexity	1	195	(0)	3331923
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
211	16.4	3.9	8.1	chr6	13590420	13591191	(157214788)	+	(TG)n	Simple_repeat	1	802	(0)	3334544
1525	10.1	0.5	1.9	chr6	15019798	15020004	(155785975)	C	AluSx	SINE/Alu	(108)	204	1	3337021
4371	10.3	2.4	3.4	chr6	15020005	15020558	(155785421)	+	MER41B	LTR/ERV1	101	633	(1)	3337019
1597	16.6	7.1	0.3	chr6	15124839	15125128	(155680851)	+	AluJo	SINE/Alu	2	312	(0)	3337299
73	12.2	0.0	4.9	chr6	15125129	15125270	(155680709)	+	GA-rich	Low_complexity	1	142	(0)	3337300
336	27.9	8.2	3.7	chr6	15125271	15125482	(155680497)	+	L1MEd	LINE/L1	1979	2207	(4018)	3337301
4095	10.7	3.5	5.1	chr6	16019753	16020362	(154785617)	+	MER4A1_	LTR/ERV1	1	600	(0)	3338852
106	25.3	1.9	2.4	chr6	16020363	16020524	(154785455)	+	(CA)n	Simple_repeat	2	165	(0)	3338853
337	24.7	0.0	1.2	chr6	16031246	16031331	(154774648)	+	MER61E	LTR/ERV1	1	85	(484)	3338877
248	15.4	0.0	5.5	chr6	16031311	16031365	(154774614)	+	LTR9D	LTR/ERV1	104	155	(490)	3338878
2444	19.0	3.0	4.1	chr6	16031415	16031909	(154774070)	+	MER61E	LTR/ERV1	85	531	(38)	3338877
2037	16.3	0.0	0.0	chr6	16035292	16035579	(154770400)	+	AluJo	SINE/Alu	4	291	(21)	3338886
58	25.4	1.0	4.6	chr6	16035586	16035778	(154770201)	+	GA-rich	Low_complexity	1	195	(0)	3338887
68	12.7	5.0	3.5	chr6	16063617	16063777	(154742202)	+	GA-rich	Low_complexity	1	169	(0)	3338936
16315	9.2	1.5	3.5	chr6	16261312	16264479	(154541500)	C	HERVH-int	LTR/ERV1	(4720)	2993	1	3339247
2351	10.1	0.7	1.0	chr6	20323936	20323950	(150482029)	C	AluSx	SINE/Alu	(17)	295	282	3345816
30	0.0	5.7	0.0	chr6	20323951	20323985	(150481994)	+	(GTTT)n	Simple_repeat	1	37	(0)	3345817
2351	10.1	0.7	1.0	chr6	20323986	20324265	(150481714)	C	AluSx	SINE/Alu	(31)	281	1	3345816
2063	11.6	0.0	0.7	chr6	24493215	24493506	(146312473)	+	AluSz	SINE/Alu	22	311	(1)	3352036
16	16.8	0.0	0.0	chr6	24493515	24493541	(146312438)	+	A-rich	Low_complexity	1	27	(0)	3352037
2605	15.5	2.6	3.5	chr6	24658847	24659355	(146146624)	+	LTR26C	LTR/ERV1	1	504	(35)	3352321
2002	20.2	5.8	1.4	chr6	25793874	25794319	(145011660)	+	MER101	LTR/ERV1	6	472	(2)	3354124
1530	13.8	2.7	9.3	chr6	26033994	26034305	(144771674)	+	AluSx3	SINE/Alu	4	294	(17)	3354518
391	23.6	8.9	6.3	chr6	26034359	26034653	(144771326)	C	LTR48	LTR/ERV1	(164)	623	163	3354519
2145	9.0	8.1	1.4	chr6	26125750	26126038	(144679941)	C	AluSq	SINE/Alu	(3)	310	1	3354669
2264	10.4	0.0	0.0	chr6	26200925	26201222	(144604757)	C	AluSp	SINE/Alu	(15)	298	1	3354814
11	29.3	1.3	6.2	chr6	26201298	26201376	(144604603)	+	A-rich	Low_complexity	1	80	(0)	3354815
238	29.7	3.3	4.8	chr6	26201453	26201576	(144604403)	+	Charlie4z	DNA/hAT-Charlie	11	132	(35)	3354816
15	13.6	0.0	2.9	chr6	26206244	26206277	(144599702)	+	(TTTTG)n	Simple_repeat	1	34	(0)	3354821
234	33.3	6.2	0.7	chr6	26206283	26206433	(144599546)	C	L1MC5a	LINE/L1	(552)	2225	2066	3354822
805	28.3	15.0	3.1	chr6	26209718	26209988	(144595991)	+	L2a	LINE/L2	2557	2881	(538)	3354827
2456	6.3	0.0	0.3	chr6	26209989	26210289	(144595690)	+	AluYk3	SINE/Alu	1	300	(11)	3354828
2232	20.6	6.0	2.7	chr6	26296882	26297395	(144508584)	C	LTR53B	LTR/ERVL	(0)	533	2	3354960
664	1.4	0.0	0.0	chr6	26322818	26322890	(144483089)	+	tRNA-Arg-CGA	tRNA	1	73	(3)	3355024
443	24.1	3.3	12.6	chr6	26323092	26323290	(144482689)	+	MER5A	DNA/hAT-Charlie	9	188	(1)	3355025
744	29.3	6.3	6.6	chr6	26336934	26337236	(144468743)	C	LTR33A	LTR/ERVL	(126)	394	93	3355051
3988	15.5	4.7	0.1	chr6	26351430	26352101	(144453878)	+	MER44D	DNA/TcMar-Tigger	1	704	(1)	3355089
2713	5.4	0.0	0.0	chr6	27134616	27134912	(143671067)	C	AluY	SINE/Alu	(14)	297	1	3356345
583	22.9	16.5	5.2	chr6	27134946	27135350	(143670629)	C	Charlie4a	DNA/hAT-Charlie	(12)	496	37	3356346
50	0.0	0.0	0.0	chr6	27145296	27145338	(143660641)	+	(AC)n	Simple_repeat	1	43	(0)	3356366
27	0.0	3.5	0.0	chr6	27177039	27177067	(143628912)	+	(AAGAAAA)n	Simple_repeat	1	30	(0)	3356431
22	17.3	0.0	0.0	chr6	27177166	27177204	(143628775)	+	A-rich	Low_complexity	1	39	(0)	3356432
677	0.0	0.0	0.0	chr6	27177214	27177288	(143628691)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356433
20582	9.6	0.8	3.9	chr6	27188071	27190816	(143615163)	+	HERVKC4-int	LTR/ERVK	1	2671	(2591)	3356439
639	13.9	8.6	0.4	chr6	27212362	27212479	(143593500)	C	FLAM_C	SINE/Alu	(91)	211	1	3356482
2308	9.3	1.3	1.3	chr6	27212520	27212853	(143593126)	C	AluSq2	SINE/Alu	(0)	313	1	3356483
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
2389	9.7	0.0	0.3	chr6	27561021	27561360	(143244619)	C	AluSg	SINE/Alu	(0)	310	2	3357113
590	0.0	0.0	22.9	chr6	27605637	27605745	(143200234)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357208
5225	7.6	2.5	0.3	chr6	27800536	27801211	(143004768)	+	LTR8	LTR/ERV1	1	691	(0)	3357619
2135	13.2	1.0	0.0	chr6	27812871	27813174	(142992805)	+	AluJr	SINE/Alu	1	307	(5)	3357638
639	19.5	0.8	0.8	chr6	27823704	27823821	(142982158)	C	AluJo	SINE/Alu	(194)	118	1	3357656
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
4965	11.3	3.9	2.0	chr6	27825846	27826625	(142979354)	C	LTR5_Hs	LTR/ERVK	(172)	796	2	3357661
5817	8.0	4.2	6.0	chr6	27826626	27828514	(142977465)	C	SVA_D	Retroposon/SVA	(450)	936	8	3357662
606	13.7	2.1	0.0	chr6	27834878	27834972	(142971007)	+	LTR49	LTR/ERV1	1	97	(525)	3357677
680	14.5	18.5	1.9	chr6	27835019	27835292	(142970687)	+	LTR49	LTR/ERV1	227	615	(29)	3357677
1262	15.7	8.8	0.9	chr6	27836797	27837025	(142968954)	C	AluJo	SINE/Alu	(27)	285	37	3357679
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
2194	9.6	2.3	1.0	chr6	27890943	27891243	(142914736)	C	AluSz	SINE/Alu	(7)	305	1	3357782
2168	14.6	0.0	0.0	chr6	27996288	27996596	(142809383)	+	AluSx1	SINE/Alu	1	309	(3)	3357936
3123	24.5	9.1	2.9	chr6	27996597	27997738	(142808241)	+	L1MEc	LINE/L1	3260	4490	(1829)	3357935
13	30.1	1.4	1.3	chr6	28261672	28261712	(142544267)	+	A-rich	Low_complexity	1	41	(0)	3358348
684	19.3	3.5	0.0	chr6	28261713	28261821	(142544158)	+	AluJr	SINE/Alu	3	115	(197)	3358349
56	0.0	0.0	0.0	chr6	28261822	28261869	(142544110)	+	(CA)n	Simple_repeat	1	48	(0)	3358350
2457	14.4	12.2	1.2	chr6	28261872	28262280	(142543699)	C	LTR46	LTR/ERV1	(0)	460	1	3358351
16	21.6	4.2	0.0	chr6	28709587	28709634	(142096345)	+	(TCT)n	Simple_repeat	1	50	(0)	3359063
180	26.7	0.0	3.2	chr6	28709755	28709816	(142096163)	C	MER5A	DNA/hAT-Charlie	(26)	163	104	3359064
631	23.5	2.9	0.0	chr6	28803352	28803487	(142002492)	+	AluJo	SINE/Alu	134	273	(39)	3359251
18	0.0	0.0	0.0	chr6	28803489	28803511	(142002468)	+	(AAGC)n	Simple_repeat	1	23	(0)	3359252
47	24.6	0.7	3.5	chr6	28803519	28803658	(142002321)	+	G-rich	Low_complexity	1	141	(0)	3359253
13	29.9	2.2	5.4	chr6	29628296	29628385	(141177594)	+	GA-rich	Low_complexity	1	92	(0)	3360367
391	16.9	3.5	2.4	chr6	29965034	29965118	(140840861)	+	LTR18B	LTR/ERVL	268	353	(261)	3360892
182	34.2	13.0	0.0	chr6	29965436	29965555	(140840424)	+	L3	LINE/CR1	3930	4067	(32)	3360893
778	30.6	12.0	2.3	chr6	29982882	29983601	(140822378)	+	L2a	LINE/L2	2618	3420	(6)	3360913
2542	7.4	0.3	0.0	chr6	30484733	30485042	(140320937)	+	AluY	SINE/Alu	1	311	(0)	3361663
1333	19.4	7.0	2.8	chr6	30876796	30876939	(139929040)	+	AluJr	SINE/Alu	1	137	(175)	3362428
2389	9.6	0.0	0.0	chr6	30876940	30877242	(139928737)	+	AluSg	SINE/Alu	1	303	(7)	3362429
2511	7.0	0.0	0.0	chr6	31030236	31030533	(139775446)	+	AluY	SINE/Alu	1	298	(13)	3362669
14	31.5	4.2	0.0	chr6	31547178	31547249	(139258730)	+	(TTTTGT)n	Simple_repeat	1	75	(0)	3363480
22	31.5	2.2	5.7	chr6	31575984	31576120	(139229859)	+	GA-rich	Low_complexity	1	140	(0)	3363536
247	18.9	0.0	3.6	chr6	31576121	31576175	(139229804)	+	L2b	LINE/L2	3323	3375	(0)	3363537
50	26.5	3.4	2.2	chr6	31588064	31588242	(139217737)	+	GA-rich	Low_complexity	1	185	(0)	3363555
678	21.9	0.8	0.0	chr6	31588252	31588374	(139217605)	+	FLAM_A	SINE/Alu	2	125	(17)	3363556
54	3.8	0.0	0.0	chr6	31588375	31588429	(139217550)	+	(AG)n	Simple_repeat	1	55	(0)	3363557
47	0.0	0.0	0.0	chr6	31652321	31652360	(139153619)	+	(AC)n	Simple_repeat	1	40	(0)	3363672
520	20.8	22.6	0.6	chr6	31678011	31678189	(139127790)	+	MIR	SINE/MIR	12	241	(21)	3363704
245	39.1	9.3	0.0	chr6	31678265	31678507	(139127472)	C	L2	LINE/L2	(1005)	2414	2147	3363705
50	0.0	0.0	0.0	chr6	31735808	31735850	(139070129)	+	(CA)n	Simple_repeat	1	43	(0)	3363796
183	21.1	2.6	0.0	chr6	31796137	31796174	(139009805)	+	MIR3	SINE/MIR	109	147	(61)	3363904
2228	11.0	0.7	1.9	chr6	31796179	31796291	(139009688)	+	AluSx	SINE/Alu	1	113	(199)	3363905
2003	7.2	0.4	0.0	chr6	31796292	31796541	(139009438)	+	AluSg7	SINE/Alu	16	266	(43)	3363906
12	16.8	3.7	7.1	chr6	31806831	31806884	(138999095)	+	(AGCGCG)n	Simple_repeat	1	56	(0)	3363932
1943	9.3	0.0	0.4	chr6	32131345	32131602	(138674377)	+	AluSx1	SINE/Alu	51	307	(5)	3364432
12	23.6	1.8	5.4	chr6	32254977	32255031	(138550948)	+	G-rich	Low_complexity	1	56	(0)	3364642
13	13.2	0.0	0.0	chr6	33190345	33190369	(137615610)	+	(CAC)n	Simple_repeat	1	25	(0)	3365958
14	16.9	2.9	0.0	chr6	33190595	33190628	(137615351)	+	G-rich	Low_complexity	1	35	(0)	3365959
16	26.1	4.6	3.3	chr6	33208607	33208693	(137597286)	+	(GGCGGC)n	Simple_repeat	1	91	(0)	3365977
457	24.6	3.9	0.0	chr6	33209010	33209131	(137596848)	C	MIRc	SINE/MIR	(13)	255	129	3365978
1407	9.1	5.0	5.9	chr6	33318225	33318444	(137487535)	+	AluJb	SINE/Alu	88	305	(7)	3366189
2175	12.4	1.9	0.0	chr6	33375692	33375997	(137429982)	C	AluSx	SINE/Alu	(0)	312	1	3366330
4844	7.7	2.0	8.4	chr6	33375998	33376289	(137429690)	C	LTR8	LTR/ERV1	(155)	536	247	3366329
2365	11.5	0.0	0.0	chr6	33376290	33376602	(137429377)	C	AluSq2	SINE/Alu	(0)	313	1	3366331
36	28.3	3.9	2.5	chr6	33440376	33440528	(137365451)	+	(TC)n	Simple_repeat	1	159	(0)	3366449
14	22.2	4.9	3.1	chr6	33440574	33440634	(137365345)	+	(TCCC)n	Simple_repeat	1	64	(0)	3366450
24	6.5	0.0	0.0	chr6	33440679	33440710	(137365269)	+	(TC)n	Simple_repeat	1	32	(0)	3366451
1684	18.4	1.3	1.0	chr6	33494424	33494727	(137311252)	+	AluJr	SINE/Alu	7	311	(1)	3366561
953	27.2	1.3	5.1	chr6	33494728	33494874	(137311105)	+	ERVL-E-int	LTR/ERVL	2011	2151	(3563)	3366556
37	2.8	0.0	0.0	chr6	33494890	33494925	(137311054)	+	(GT)n	Simple_repeat	1	36	(0)	3366562
2323	9.7	0.0	0.0	chr6	33600330	33600628	(137205351)	C	AluSc	SINE/Alu	(9)	300	2	3366819
112	29.8	0.9	0.3	chr6	33864136	33864382	(136941597)	+	(GT)n	Simple_repeat	1	247	(0)	3367246
4344	19.2	9.2	4.6	chr6	33864383	33865309	(136940670)	+	LTR28B	LTR/ERV1	1	974	(0)	3367247
4499	20.2	2.4	0.9	chr6	35564771	35565703	(135240276)	C	HERVIP10B3-int	LTR/ERV1	(5601)	1989	1082	3370660
181	9.4	0.0	11.1	chr6	35726433	35726468	(135079511)	+	MIRb	SINE/MIR	188	219	(49)	3371012
54	0.0	0.0	0.0	chr6	35726537	35726582	(135079397)	+	(CA)n	Simple_repeat	1	46	(0)	3371013
16	8.3	0.0	0.0	chr6	35728127	35728152	(135077827)	+	(CGGG)n	Simple_repeat	1	26	(0)	3371015
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
674	28.9	7.2	0.0	chr6	35788476	35788655	(135017324)	C	MIR	SINE/MIR	(11)	251	58	3371153
19	7.4	0.0	0.0	chr6	35788684	35788712	(135017267)	+	(AAGG)n	Simple_repeat	1	29	(0)	3371154
825	27.1	18.0	2.4	chr6	36331826	36332545	(134473434)	+	L2a	LINE/L2	2573	3426	(0)	3372267
2146	10.0	3.7	0.0	chr6	36782523	36782811	(134023168)	+	AluSq	SINE/Alu	1	300	(13)	3373275
62	0.0	0.0	0.0	chr6	36782817	36782869	(134023110)	+	(AC)n	Simple_repeat	1	53	(0)	3373276
346	31.9	5.4	1.4	chr6	36782882	36783069	(134022910)	+	MIRb	SINE/MIR	38	241	(27)	3373277
12	30.5	1.3	5.2	chr6	36793551	36793626	(134012353)	+	(TCCC)n	Simple_repeat	1	77	(0)	3373305
184	25.2	5.7	7.5	chr6	36817401	36817507	(133988472)	+	MIR3	SINE/MIR	104	208	(0)	3373355
695	26.1	1.1	2.6	chr6	36817604	36817792	(133988187)	+	LTR33	LTR/ERVL	1	186	(329)	3373356
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
138	22.7	0.3	0.0	chr6	37020873	37021168	(133784811)	+	(GTGT)n	Simple_repeat	1	297	(0)	3373744
414	26.0	3.8	0.8	chr6	37021234	37021361	(133784618)	+	MIRb	SINE/MIR	38	169	(99)	3373745
2536	7.7	0.3	0.0	chr6	37151051	37151362	(133654617)	C	AluSq2	SINE/Alu	(0)	313	1	3374081
18	0.0	6.9	0.0	chr6	37151368	37151396	(133654583)	+	(TTCCCT)n	Simple_repeat	1	31	(0)	3374082
44	6.3	0.0	0.0	chr6	37151399	37151449	(133654530)	+	(TC)n	Simple_repeat	1	51	(0)	3374083
1754	13.2	4.8	4.2	chr6	37151454	37151741	(133654238)	C	AluSz	SINE/Alu	(22)	290	1	3374084
35	20.9	0.0	0.0	chr6	37170434	37170510	(133635469)	+	(CAGCCA)n	Simple_repeat	1	77	(0)	3374138
117	25.5	1.6	3.1	chr6	37204029	37204411	(133601568)	+	(ACACAA)n	Simple_repeat	1	389	(0)	3374229
1037	13.7	0.0	0.6	chr6	37204431	37204592	(133601387)	+	L1PA15	LINE/L1	5870	6030	(135)	3374230
557	24.9	5.5	3.4	chr6	40647541	40647719	(130158260)	C	L1M5	LINE/L1	(354)	5769	5587	3379842
46	4.3	0.0	0.0	chr6	40647940	40647987	(130157992)	+	(GT)n	Simple_repeat	1	48	(0)	3379843
262	28.2	10.4	0.0	chr6	40647988	40648090	(130157889)	+	L2a	LINE/L2	3312	3426	(0)	3379844
1720	8.5	0.0	0.0	chr6	41466188	41466398	(129339581)	+	AluSp	SINE/Alu	1	211	(102)	3381214
86	20.2	4.7	3.5	chr6	41466431	41466704	(129339275)	+	GA-rich	Low_complexity	1	287	(0)	3381215
2399	9.3	0.7	0.3	chr6	41500244	41500553	(129305426)	+	AluSz	SINE/Alu	1	311	(1)	3381281
54	3.7	0.0	0.0	chr6	41656187	41656241	(129149738)	+	(CA)n	Simple_repeat	1	55	(0)	3381563
35	27.6	3.7	2.1	chr6	41656256	41656391	(129149588)	+	(CA)n	Simple_repeat	1	141	(0)	3381563
2371	9.5	0.3	0.0	chr6	41761024	41761328	(129044651)	+	AluSp	SINE/Alu	1	306	(7)	3381773
1151	29.2	6.8	6.8	chr6	41761329	41761707	(129044272)	+	L2a	LINE/L2	2814	3209	(217)	3381772
13	18.4	5.7	3.6	chr6	41780087	41780139	(129025840)	+	(GCGCGGAG)n	Simple_repeat	1	56	(0)	3381804
12	21.8	2.7	0.0	chr6	41780265	41780301	(129025678)	+	G-rich	Low_complexity	1	38	(0)	3381805
2142	11.6	0.3	0.0	chr6	42050104	42050397	(128755582)	+	AluSz	SINE/Alu	6	300	(12)	3382426
351	24.3	5.3	0.0	chr6	42136878	42136984	(128668995)	+	MER5A1	DNA/hAT-Charlie	46	158	(8)	3382616
1408	30.5	13.3	2.3	chr6	42197671	42198492	(128607487)	+	L2a	LINE/L2	906	1831	(1588)	3382770
1151	23.3	17.9	7.2	chr6	42199452	42199870	(128606109)	+	MLT1G3	LTR/ERVL-MaLR	79	577	(2)	3382776
53	36.8	1.2	0.0	chr6	42922765	42922933	(127883046)	+	(TGGA)n	Simple_repeat	4	175	(0)	3384351
245	29.5	5.4	4.7	chr6	42982009	42982136	(127823843)	+	L2c	LINE/L2	2559	2687	(732)	3384471
2335	10.2	0.3	0.0	chr6	42982176	42982480	(127823499)	C	AluSx1	SINE/Alu	(6)	306	1	3384472
2595	17.2	8.9	6.0	chr6	43093678	43094304	(127711675)	C	MER51A	LTR/ERV1	(0)	640	1	3384674
47	2.2	0.0	0.0	chr6	43183693	43183739	(127622240)	+	(CCTT)n	Simple_repeat	1	47	(0)	3384874
2331	11.7	0.7	0.0	chr6	43183743	43184050	(127621929)	C	AluSg	SINE/Alu	(0)	310	1	3384875
322	30.2	3.4	0.3	chr6	43293872	43294963	(127511016)	+	(CAC)n	Simple_repeat	1	1129	(0)	3385083
4584	25.5	10.8	3.1	chr6	43461959	43462962	(127343017)	+	L2a	LINE/L2	1241	2393	(1026)	3385398
767	12.8	0.0	11.4	chr6	43462963	43463111	(127342868)	+	FLAM_C	SINE/Alu	1	132	(11)	3385404
47	4.2	0.0	0.0	chr6	43702713	43702761	(127103218)	+	(TG)n	Simple_repeat	1	49	(0)	3385855
22	29.6	2.6	3.4	chr6	43891260	43891373	(126914606)	+	(CTCTCT)n	Simple_repeat	1	117	(0)	3386198
2168	12.0	0.3	0.0	chr6	44177477	44177785	(126628194)	C	AluSx	SINE/Alu	(1)	311	2	3386705
1189	31.5	7.4	1.3	chr6	50962297	50963046	(119842933)	C	L2a	LINE/L2	(8)	3418	2610	3396392
18	4.8	0.0	0.0	chr6	51050701	51050722	(119755257)	+	(T)n	Simple_repeat	1	22	(0)	3396518
14	13.6	0.0	5.6	chr6	57089809	57089844	(113716135)	+	(AACCA)n	Simple_repeat	1	36	(0)	3405115
7791	1.8	0.0	0.0	chr6	67879824	67880939	(102925040)	+	L1PA2	LINE/L1	5032	6147	(8)	3416015
13473	28.8	5.7	5.1	chr6	67881437	67888662	(102917317)	C	HERVH-int	LTR/ERV1	(0)	7713	596	3416017
1477	24.3	8.7	1.0	chr6	67889062	67889473	(102916506)	C	LTR7C	LTR/ERV1	(0)	471	25	3416018
16	13.2	0.0	0.0	chr6	70337466	70337490	(100468489)	+	(T)n	Simple_repeat	1	25	(0)	3419066
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
313	19.3	22.0	1.4	chr6	85680344	85680490	(85125489)	C	L1ME4b	LINE/L1	(128)	764	579	3439434
973	17.6	4.8	1.1	chr6	85680495	85680676	(85125303)	C	AluJb	SINE/Alu	(20)	292	104	3439435
188	35.8	3.9	1.6	chr6	85680725	85680849	(85125130)	+	MER5B	DNA/hAT-Charlie	1	128	(50)	3439436
5610	18.4	7.6	5.1	chr6	95518595	95520168	(75285811)	C	LTR2752	LTR/ERV1	(174)	1581	1	3452570
62	0.0	0.0	0.0	chr6	100107643	100107695	(70698284)	+	(TG)n	Simple_repeat	1	53	(0)	3458584
15	14.4	0.0	3.0	chr6	105849989	105850021	(64955958)	+	(CATT)n	Simple_repeat	1	33	(0)	3466001
258	34.8	5.9	6.3	chr6	105850036	105850274	(64955705)	C	L2b	LINE/L2	(5)	3370	3133	3466002
32	26.9	0.0	3.7	chr6	116616035	116616141	(54189838)	+	(TCCC)n	Simple_repeat	1	107	(0)	3482821
17	8.2	3.9	0.0	chr6	116616124	116616149	(54189830)	+	(CA)n	Simple_repeat	1	27	(0)	3482822
3141	14.4	3.6	5.9	chr6	123590093	123590482	(47215497)	+	MER1A	DNA/hAT-Charlie	3	406	(123)	3491877
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
1780	15.1	7.6	14.2	chr6	126335141	126335296	(44470683)	+	MER65A	LTR/ERV1	311	445	(0)	3495536
1181	20.2	11.0	0.0	chr6	126335297	126335554	(44470425)	+	MLT1D	LTR/ERVL-MaLR	216	505	(0)	3495539
296	25.8	9.6	9.0	chr6	131646135	131646274	(39159705)	C	HAL1	LINE/L1	(1400)	1107	970	3502657
41	0.0	0.0	0.0	chr6	131646275	131646309	(39159670)	+	(TG)n	Simple_repeat	1	35	(0)	3502659
296	25.8	9.6	9.0	chr6	131646310	131646458	(39159521)	C	HAL1	LINE/L1	(1538)	969	816	3502657
54	0.0	0.0	0.0	chr6	134052251	134052296	(36753683)	+	(AC)n	Simple_repeat	1	46	(0)	3506090
31	0.0	0.0	0.0	chr6	139516484	139516512	(31289467)	+	(T)n	Simple_repeat	1	29	(0)	3514810
1602	34.0	10.5	4.6	chr6	139551357	139552258	(31253721)	+	L3	LINE/CR1	459	1397	(2702)	3514876
1128	31.4	4.5	6.0	chr6	139648766	139649218	(31156761)	+	L3	LINE/CR1	2339	2784	(1315)	3515012
49	0.0	0.0	0.0	chr6	139754690	139754731	(31051248)	+	(TG)n	Simple_repeat	1	42	(0)	3515170
6124	10.2	0.3	0.1	chr6	140147769	140148683	(30657296)	C	LTR12C	LTR/ERV1	(660)	919	3	3515720
451	31.9	6.9	0.0	chr6	143578429	143578563	(27227416)	+	MER91A	DNA/hAT-Tip100	1	145	(51)	3520111
31	15.3	4.0	2.5	chr6	143578635	143578710	(27227269)	+	GA-rich	Low_complexity	1	79	(0)	3520112
54	0.0	0.0	0.0	chr6	146028233	146028278	(24777701)	+	(GT)n	Simple_repeat	1	46	(0)	3523493
2098	8.4	0.0	0.3	chr6	149941241	149941559	(20864420)	+	AluSq	SINE/Alu	1	313	(0)	3529419
13	17.3	2.3	4.5	chr6	149988558	149988600	(20817379)	+	G-rich	Low_complexity	1	44	(0)	3529488
3071	17.9	0.7	0.2	chr6	150015478	150016069	(20789910)	C	MER41E	LTR/ERV1	(0)	595	1	3529518
526	34.4	5.5	9.3	chr6	150150789	150151509	(20654470)	+	L2b	LINE/L2	2039	2730	(689)	3529758
268	31.2	6.0	0.8	chr6	150269744	150269869	(20536110)	+	L2b	LINE/L2	3241	3373	(2)	3529945
13	17.4	0.0	2.9	chr6	150269924	150269957	(20536022)	+	(GGAGGT)n	Simple_repeat	1	34	(0)	3529946
4562	18.1	6.0	0.9	chr6	150560014	150560865	(20245114)	+	MER54A	LTR/ERVL	1	898	(3)	3530419
35	11.3	5.8	1.4	chr6	150900037	150900044	(19905935)	+	(AT)n	Simple_repeat	5	70	(0)	3530944
939	29.0	3.3	9.1	chr6	152879397	152879912	(17926067)	C	L2a	LINE/L2	(1)	3425	2941	3534151
18249	8.2	1.1	2.6	chr6	152879913	152882748	(17923231)	+	L1PA6	LINE/L1	2752	5543	(625)	3534152
438	27.6	3.5	2.4	chr6	154615686	154615852	(16190127)	+	LTR16A1	LTR/ERVL	1	169	(287)	3536707
69	37.0	0.4	0.0	chr6	157221601	157221868	(13584111)	+	(CA)n	Simple_repeat	1	269	(0)	3540567
202	23.1	3.0	1.2	chr6	157270154	157270710	(13535269)	+	(CCATCA)n	Simple_repeat	1	574	(0)	3540644
141	39.0	0.1	1.0	chr6	157630423	157631135	(13174844)	+	(AC)n	Simple_repeat	1	714	(0)	3541206
774	24.4	1.1	6.0	chr6	157696873	157697131	(13108848)	+	MLT1H2	LTR/ERVL-MaLR	282	555	(0)	3541307
471	32.7	4.8	9.1	chr6	157697151	157697534	(13108445)	+	L2c	LINE/L2	3014	3387	(0)	3541310
104	25.1	6.1	2.2	chr6	158852933	158853360	(11952619)	+	(CA)n	Simple_repeat	1	454	(0)	3543240
26	9.9	5.4	1.7	chr6	159693321	159693376	(11112603)	+	(CCGCC)n	Simple_repeat	1	59	(0)	3544447
261	28.7	3.7	8.5	chr6	161194734	161194874	(9611105)	+	L2c	LINE/L2	3254	3387	(0)	3546317
3259	5.5	0.8	21.5	chr6	161224870	161225515	(9580464)	+	LTR10F	LTR/ERV1	1	511	(0)	3546358
246	15.4	5.7	2.4	chr6	161374165	161374761	(9431218)	+	(GT)n	Simple_repeat	1	631	(0)	3546590
708	23.5	4.3	0.6	chr6	163777362	163777541	(7028438)	+	MER58A	DNA/hAT-Charlie	34	220	(4)	3549910
705	18.8	1.5	0.0	chr6	166353470	166353597	(4452382)	+	LTR54B	LTR/ERV1	1	130	(368)	3553152
91	18.7	2.2	3.4	chr6	166353602	166353829	(4452150)	+	(TCCT)n	Simple_repeat	1	233	(0)	3553153
16	11.3	5.0	2.4	chr6	167801377	167801416	(3004563)	+	(TGTCCC)n	Simple_repeat	1	42	(0)	3554803
277	34.4	3.8	9.5	chr6	167801432	167801913	(3004066)	+	L2	LINE/L2	1807	2259	(1160)	3554804
52	23.4	3.1	3.0	chr6	169786989	169787151	(1018828)	+	(CTCTTC)n	Simple_repeat	1	168	(0)	3556853
382	22.4	0.0	0.0	chr6	169787162	169787228	(1018751)	C	AluJo	SINE/Alu	(44)	268	202	3556854
2395	10.3	0.6	0.0	chr6	169787264	169787574	(1018405)	C	AluSq	SINE/Alu	(0)	313	1	3556855
2051	15.8	5.8	0.0	chr6	170183219	170183591	(622388)	C	MER57B2	LTR/ERV1	(0)	403	8	3557208
150	24.2	0.6	0.3	chr6	170183595	170183939	(622040)	+	(TGATGA)n	Simple_repeat	1	347	(0)	3557209
1389	20.5	1.9	0.4	chr6	170597209	170597471	(208508)	+	AluJo	SINE/Alu	43	309	(3)	3557630
47	20.6	2.9	3.5	chr6	170597474	170597610	(208369)	+	GA-rich	Low_complexity	1	141	(0)	3557631
2196	13.0	0.0	1.3	chr6	170597716	170598031	(207948)	C	AluSx	SINE/Alu	(0)	312	1	3557632
203	20.2	3.2	0.2	chr7	451176	451641	(158894332)	+	(CT)n	Simple_repeat	1	481	(0)	3558364
2247	19.8	3.0	10.3	chr7	725511	726196	(158619777)	+	LTR8	LTR/ERV1	57	690	(1)	3558808
5503	17.9	4.5	1.9	chr7	2022586	2023666	(157322307)	+	L1MCa	LINE/L1	2173	3294	(3027)	3560721
318	36.0	4.0	0.8	chr7	2059788	2060031	(157285942)	+	L1ME3A	LINE/L1	4285	4536	(1610)	3560765
181	34.4	0.4	1.9	chr7	2102151	2102836	(157243137)	+	(CCACCA)n	Simple_repeat	1	689	(0)	3560807
6394	7.3	1.8	5.2	chr7	2302090	2303968	(157042005)	+	SVA_D	Retroposon/SVA	17	1386	(0)	3561092
118	12.0	4.0	1.3	chr7	2657281	2657505	(156688468)	+	(GTGATG)n	Simple_repeat	1	234	(0)	3561790
477	27.4	10.1	2.0	chr7	2657516	2657716	(156688257)	+	MIRb	SINE/MIR	1	219	(49)	3561791
21	16.3	4.5	4.3	chr7	2894257	2894301	(156451672)	+	(TGTTTC)n	Simple_repeat	1	194	(0)	3562231
24	25.5	8.1	2.5	chr7	2894302	2894450	(156451523)	+	(CCCTCT)n	Simple_repeat	1	161	(0)	3562232
330	7.2	0.0	5.8	chr7	4680999	4681468	(154664505)	+	(GGAA)n	Simple_repeat	3	442	(0)	3565382
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
27	22.1	0.0	0.0	chr7	5525625	5525687	(153820286)	+	(ATGA)n	Simple_repeat	1	63	(0)	3567251
208	25.4	7.3	3.1	chr7	5525688	5525752	(153820221)	+	LFSINE_Vert	SINE/tRNA	251	318	(141)	3567252
339	32.7	2.6	0.0	chr7	5525715	5525827	(153820146)	+	L2c	LINE/L2	3272	3387	(0)	3567253
1011	15.2	3.0	1.2	chr7	5526205	5526368	(153819605)	+	AluJo	SINE/Alu	132	298	(14)	3567254
46	0.0	0.0	0.0	chr7	5554790	5554828	(153791145)	+	(TG)n	Simple_repeat	1	39	(0)	3567324
44	0.0	0.0	0.0	chr7	6448189	6448228	(152897745)	+	(T)n	Simple_repeat	1	40	(0)	3569391
2159	7.2	1.8	0.4	chr7	6448232	6448507	(152897466)	C	AluSz	SINE/Alu	(32)	280	1	3569392
844	16.4	0.6	10.9	chr7	6448511	6448693	(152897280)	C	AluJr	SINE/Alu	(15)	297	134	3569393
312	16.4	20.1	6.5	chr7	6451225	6451394	(152894579)	C	MER51E	LTR/ERV1	(34)	448	250	3569403
994	7.4	0.0	6.3	chr7	6451397	6451554	(152894419)	C	MER51E	LTR/ERV1	(334)	148	1	3569403
2150	13.3	0.7	0.3	chr7	6451555	6451855	(152894118)	C	AluSz	SINE/Alu	(10)	302	1	3569404
13	21.9	2.3	2.2	chr7	16646094	16646137	(142699836)	+	G-rich	Low_complexity	1	45	(0)	3582782
32	3.0	0.0	0.0	chr7	16646203	16646236	(142699737)	+	(CTG)n	Simple_repeat	1	34	(0)	3582783
700	31.9	7.2	5.6	chr7	20219895	20220355	(139125618)	+	MLT1N2	LTR/ERVL-MaLR	93	561	(1)	3587458
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
2932	8.1	5.1	2.8	chr7	23802066	23802522	(135543451)	C	LTR21A	LTR/ERV1	(0)	481	14	3592993
2270	11.4	0.0	0.0	chr7	23802523	23802812	(135543161)	C	AluSx1	SINE/Alu	(21)	291	2	3592994
40	2.6	0.0	0.0	chr7	29723690	29723728	(129622245)	+	(AC)n	Simple_repeat	1	39	(0)	3602023
30	32.7	1.4	2.8	chr7	29723750	29723889	(129622084)	+	(CA)n	Simple_repeat	1	142	(0)	3602024
20	7.8	0.0	0.0	chr7	29723930	29723956	(129622017)	+	(CT)n	Simple_repeat	1	27	(0)	3602025
12	12.7	8.5	3.9	chr7	30284482	30284528	(129061445)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	3602921
357	30.4	7.1	11.4	chr7	38009558	38009777	(121336196)	+	HAL1	LINE/L1	1003	1202	(1305)	3614534
18	28.5	4.8	2.3	chr7	38009783	38009866	(121336107)	+	GA-rich	Low_complexity	1	88	(0)	3614538
14	30.0	4.0	1.3	chr7	38009969	38010044	(121335929)	+	A-rich	Low_complexity	1	79	(0)	3614539
184	35.8	12.3	6.5	chr7	42986609	42986898	(116359075)	C	L2c	LINE/L2	(5)	3382	3074	3621946
415	29.6	0.6	9.1	chr7	43838757	43838931	(115507042)	C	TAR1	Satellite/telo	(181)	1930	1771	3623257
42	19.8	1.2	0.0	chr7	47380706	47380788	(111965185)	+	(CA)n	Simple_repeat	1	84	(0)	3628450
148	11.4	6.7	3.0	chr7	47946351	47946692	(111399281)	+	(CA)n	Simple_repeat	1	365	(0)	3629282
380	30.2	12.0	0.9	chr7	56107124	56107409	(103238564)	C	L2a	LINE/L2	(8)	3367	3029	3639947
2209	10.2	1.4	0.0	chr7	56107443	56107735	(103238238)	C	AluSx	SINE/Alu	(15)	297	1	3639948
2893	1.9	0.0	0.0	chr7	65490169	65490477	(93855496)	C	AluYa5	SINE/Alu	(2)	309	1	3647906
48	19.0	0.9	2.6	chr7	65490478	65490541	(93855432)	+	(CTCCA)n	Simple_repeat	4	67	(0)	3647907
54	8.2	2.1	2.0	chr7	65490543	65490638	(93855335)	+	(CATTC)n	Simple_repeat	1	98	(0)	3647908
30	0.0	0.0	0.0	chr7	66100213	66100240	(93245733)	+	(AGG)n	Simple_repeat	1	28	(0)	3649226
12	5.6	0.0	0.0	chr7	66100275	66100293	(93245680)	+	(AGG)n	Simple_repeat	1	19	(0)	3649226
200	26.9	3.7	0.0	chr7	66639819	66639870	(92706103)	+	MamRTE1	LINE/RTE-BovB	1989	2042	(1770)	3650479
43	31.3	2.8	5.0	chr7	66920826	66921080	(92424893)	+	(CA)n	Simple_repeat	1	262	(0)	3651108
12	15.8	0.0	3.3	chr7	66921065	66921094	(92424879)	+	(CACG)n	Simple_repeat	1	30	(0)	3651109
10967	15.7	7.7	4.1	chr7	67128989	67129689	(92216284)	C	L1MC1	LINE/L1	(5824)	684	3	3651558
1409	9.4	1.0	4.2	chr7	71576339	71576529	(87769444)	C	L1P4	LINE/L1	(495)	5671	5481	3660502
43	0.0	0.0	0.0	chr7	71576530	71576566	(87769407)	+	(TG)n	Simple_repeat	1	37	(0)	3660503
2114	13.0	1.3	0.0	chr7	71576567	71576866	(87769107)	C	AluSz	SINE/Alu	(8)	304	1	3660504
3635	10.1	5.7	2.8	chr7	72710928	72711473	(86634500)	+	LTR19B	LTR/ERV1	1	566	(14)	3662913
527	35.0	3.8	0.9	chr7	72805694	72806027	(86539946)	C	L2	LINE/L2	(2511)	908	565	3663098
2532	5.5	0.0	0.3	chr7	73433200	73433506	(85912467)	+	AluSq2	SINE/Alu	2	307	(6)	3664623
889	25.0	6.2	2.8	chr7	73561973	73562250	(85783723)	+	L2a	LINE/L2	2855	3142	(284)	3664916
2156	10.7	0.0	3.6	chr7	73562251	73562558	(85783415)	+	AluSc	SINE/Alu	1	297	(12)	3664917
889	26.7	3.3	4.1	chr7	73562559	73562677	(85783296)	+	L2a	LINE/L2	3143	3249	(177)	3664916
3128	10.0	2.9	0.5	chr7	73562678	73563067	(85782906)	+	MLT2A1	LTR/ERVL	1	401	(43)	3664918
113	32.3	3.3	2.3	chr7	73597997	73598578	(85747395)	+	(ATCC)n	Simple_repeat	1	601	(0)	3665015
149	17.8	0.4	0.0	chr7	73726185	73726462	(85619511)	+	(TGTGTG)n	Simple_repeat	1	279	(0)	3665312
31	23.6	6.8	2.5	chr7	73818421	73818556	(85527417)	+	(TCCTTCT)n	Simple_repeat	1	141	(0)	3665550
2136	13.0	0.7	0.0	chr7	73818557	73818855	(85527118)	C	AluSx	SINE/Alu	(11)	301	1	3665551
2063	14.7	1.0	0.3	chr7	73885809	73886115	(85459858)	+	AluJr	SINE/Alu	1	309	(3)	3665709
806	19.4	2.2	5.3	chr7	73886116	73886239	(85459734)	C	MER5A	DNA/hAT-Charlie	(56)	133	6	3665708
194	22.7	0.0	4.3	chr7	73886247	73886292	(85459681)	+	UCON132b	DNA/hAT-Tip100	103	146	(2)	3665710
2167	13.1	0.6	1.0	chr7	74005648	74005959	(85340014)	+	AluJr	SINE/Alu	1	311	(1)	3665973
25	22.1	3.3	4.3	chr7	74005960	74006051	(85339922)	+	GA-rich	Low_complexity	1	91	(0)	3665974
151	18.8	1.1	3.6	chr7	74058001	74058342	(85287631)	+	(TTC)n	Simple_repeat	1	335	(0)	3666076
1948	16.6	0.6	1.0	chr7	74058343	74058655	(85287318)	C	AluJo	SINE/Alu	(0)	312	1	3666077
2364	9.8	0.3	0.0	chr7	74079564	74079869	(85266104)	+	AluSx1	SINE/Alu	1	307	(5)	3666135
86	29.7	3.2	0.3	chr7	74371508	74371787	(84974186)	+	GA-rich	Low_complexity	1	289	(0)	3666909
1847	9.5	0.0	0.0	chr7	75074130	75074360	(84271613)	C	AluSz	SINE/Alu	(81)	231	1	3668726
2094	11.8	4.2	1.6	chr7	75755768	75755887	(83590086)	+	AluJb	SINE/Alu	1	119	(193)	3670449
53	0.0	0.0	0.0	chr7	75755888	75755932	(83590041)	+	(AC)n	Simple_repeat	1	45	(0)	3670450
2094	11.8	4.2	1.6	chr7	75755933	75756115	(83589858)	+	AluJb	SINE/Alu	120	312	(0)	3670449
2314	6.9	1.0	4.7	chr7	75990604	75990920	(83355053)	+	AluSx1	SINE/Alu	1	305	(7)	3671063
342	34.6	5.3	6.3	chr7	75991201	75991393	(83354580)	+	L2b	LINE/L2	2926	3102	(285)	3671064
347	19.0	6.8	1.0	chr7	76049638	76049724	(83296249)	C	L2a	LINE/L2	(1)	3386	3288	3671215
2379	8.3	0.0	1.0	chr7	76395694	76395994	(82949979)	C	AluSq2	SINE/Alu	(15)	298	1	3672043
15	13.9	0.0	0.0	chr7	76396118	76396141	(82949832)	+	(A)n	Simple_repeat	1	24	(0)	3672044
2597	19.1	3.1	1.3	chr7	76396162	76396638	(82949335)	+	MER66B	LTR/ERV1	1	486	(0)	3672045
375	23.4	1.8	6.7	chr7	87140319	87140437	(72205536)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	399	3686846
4671	28.9	9.5	9.5	chr7	88531570	88532394	(70813579)	C	L2	LINE/L2	(2104)	1315	405	3688682
15	13.6	0.0	5.6	chr7	91264241	91264276	(68081697)	+	(TCC)n	Simple_repeat	1	36	(0)	3692226
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
6377	26.2	10.6	2.2	chr7	91299350	91301208	(68044765)	+	L2a	LINE/L2	774	2827	(592)	3692277
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
114	21.5	4.7	0.9	chr7	92423632	92423948	(66922025)	+	(TG)n	Simple_repeat	1	332	(0)	3693856
3379	26.4	8.7	2.2	chr7	92597718	92598504	(66747469)	+	L2a	LINE/L2	2572	3426	(0)	3694152
370	32.6	13.0	1.4	chr7	92598511	92598855	(66747118)	+	L2a	LINE/L2	1547	1937	(1482)	3694155
486	31.9	17.7	4.5	chr7	92598824	92599250	(66746723)	+	L2a	LINE/L2	2931	3426	(0)	3694155
148	16.2	1.3	3.1	chr7	92997788	92998085	(66347888)	+	(TTCC)n	Simple_repeat	1	293	(0)	3694702
193	34.9	6.6	7.4	chr7	97105080	97105149	(62240824)	C	L2	LINE/L2	(1413)	2006	1937	3700272
1987	8.5	7.2	0.7	chr7	97105150	97105420	(62240553)	+	AluSz	SINE/Alu	1	290	(22)	3700273
1963	19.9	16.5	3.3	chr7	97130371	97131072	(62214901)	C	LTR27E	LTR/ERV1	(430)	833	1	3700311
228	15.2	0.3	0.0	chr7	98817243	98817628	(60528345)	+	(GTGT)n	Simple_repeat	1	387	(0)	3703466
21	9.8	0.0	0.0	chr7	99408550	99408582	(59937391)	+	(GCG)n	Simple_repeat	1	33	(0)	3704671
18141	9.4	0.2	0.4	chr7	99833671	99836055	(59509918)	C	HERV15-int	LTR/ERV1	(5)	8730	6349	3705357
260	27.9	11.2	5.4	chr7	99996896	99997062	(59348911)	+	MIRc	SINE/MIR	2	179	(89)	3705630
51	3.2	3.0	1.4	chr7	99997129	99997195	(59348778)	+	(TTCC)n	Simple_repeat	1	69	(0)	3705631
23	13.8	4.1	0.0	chr7	99997196	99997244	(59348729)	+	(CTCC)n	Simple_repeat	1	51	(0)	3705632
1965	15.8	0.3	0.7	chr7	99997247	99997550	(59348423)	C	AluJr	SINE/Alu	(7)	305	3	3705633
1831	12.3	7.7	0.4	chr7	100011951	100012226	(59333747)	+	AluSq2	SINE/Alu	1	298	(15)	3705678
2355	8.1	0.0	2.6	chr7	100125762	100125904	(59220069)	+	AluSx1	SINE/Alu	1	143	(169)	3705908
2426	6.9	0.0	0.0	chr7	100125905	100126195	(59219778)	+	AluY	SINE/Alu	1	291	(20)	3705909
29	2.2	5.9	3.7	chr7	100479256	100479306	(58866667)	+	(CTC)n	Simple_repeat	1	54	(0)	3706677
17	30.0	0.0	0.0	chr7	100479352	100479408	(58866565)	+	(CTGCTG)n	Simple_repeat	1	57	(0)	3706678
7382	6.9	2.4	1.0	chr7	100839970	100841080	(58504893)	+	Harlequin-int	LTR/ERV1	286	1412	(5484)	3707495
15	27.6	0.0	4.5	chr7	101154651	101154716	(58191257)	+	G-rich	Low_complexity	1	66	(0)	3708122
2022	13.6	1.0	1.0	chr7	101265589	101265896	(58080077)	C	AluJo	SINE/Alu	(0)	312	5	3708370
846	11.2	13.8	5.9	chr7	101265916	101266067	(58079906)	C	AluSx	SINE/Alu	(10)	302	137	3708371
339	23.9	1.4	0.0	chr7	101266075	101266145	(58079828)	C	MER2	DNA/TcMar-Tigger	(273)	72	1	3708372
96	31.6	0.6	0.9	chr7	101687114	101687438	(57658535)	+	(CA)n	Simple_repeat	1	327	(0)	3709416
2162	12.2	0.3	0.3	chr7	101697308	101697603	(57648370)	+	AluSx1	SINE/Alu	1	296	(16)	3709443
319	27.6	11.1	2.6	chr7	101697740	101697895	(57648078)	C	L4_A_Mam	LINE/RTE-X	(191)	4799	4629	3709444
14	14.2	3.2	0.0	chr7	101914277	101914307	(57431666)	+	(TTG)n	Simple_repeat	1	32	(0)	3709929
87	16.5	0.7	0.0	chr7	101914341	101914495	(57431478)	+	(TTCC)n	Simple_repeat	1	156	(0)	3709930
232	30.8	5.1	1.5	chr7	102081087	102081218	(57264755)	+	L2	LINE/L2	2148	2284	(1135)	3710262
533	26.9	10.7	3.7	chr7	102081219	102081316	(57264657)	+	L2	LINE/L2	2434	2550	(869)	3710262
19732	10.2	2.4	1.4	chr7	102974409	102977040	(56368933)	+	HERVH48-int	LTR/ERV1	485	3158	(3496)	3712026
22398	7.7	0.6	0.5	chr7	103037830	103043543	(56302430)	+	L1P2	LINE/L1	5	5710	(444)	3712117
835	27.6	8.7	3.1	chr7	103995599	103996117	(55349856)	C	L1ME3A	LINE/L1	(7)	6166	5616	3713473
308	28.2	6.5	8.6	chr7	103996121	103996341	(55349632)	+	L1MEd	LINE/L1	90	305	(6781)	3713474
682	23.6	5.8	1.0	chr7	103996353	103996549	(55349424)	+	MER5C1	DNA/hAT-Charlie	2	208	(55)	3713475
1776	14.8	5.6	0.4	chr7	105392526	105392795	(53953178)	C	AluSz	SINE/Alu	(25)	287	3	3715705
2239	10.6	0.0	1.3	chr7	105392808	105392979	(53952994)	C	AluSx	SINE/Alu	(7)	305	137	3715706
2252	9.8	0.0	2.9	chr7	105392980	105393295	(53952678)	C	AluSx1	SINE/Alu	(5)	307	1	3715707
602	23.5	19.4	12.0	chr7	105401300	105401387	(53944586)	+	LTR50	LTR/ERVL	9	88	(707)	3715735
2019	11.9	0.0	0.3	chr7	105401388	105401673	(53944300)	C	AluSz	SINE/Alu	(0)	312	28	3715736
1897	22.8	12.7	10.1	chr7	105526576	105526724	(53819249)	C	HAL1	LINE/L1	(0)	2507	2381	3716053
2264	11.4	0.0	0.0	chr7	105526725	105527022	(53818951)	C	AluSx	SINE/Alu	(14)	298	1	3716054
1016	23.2	8.7	8.5	chr7	106038216	106038810	(53307163)	C	L2a	LINE/L2	(174)	3252	2668	3716999
356	32.5	6.1	7.5	chr7	106427251	106427929	(52918044)	+	L2a	LINE/L2	2448	3114	(261)	3717571
18	0.0	3.5	3.3	chr7	106427947	106427975	(52917998)	+	(TGT)n	Simple_repeat	1	30	(0)	3717572
2218	10.3	5.1	0.0	chr7	107010443	107010723	(52335250)	C	AluSz	SINE/Alu	(11)	301	6	3718439
332	23.6	10.2	3.6	chr7	107659762	107659871	(51686102)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	49	3719410
301	32.3	3.8	3.8	chr7	108080614	108080745	(51265228)	C	L2c	LINE/L2	(5)	3382	3251	3720074
1229	27.4	9.3	1.7	chr7	108377939	108378632	(50967341)	+	L1MEd	LINE/L1	534	1285	(5801)	3720440
67	0.0	0.0	0.0	chr7	108378633	108378689	(50967284)	+	(AC)n	Simple_repeat	1	57	(0)	3720441
1229	27.4	9.3	1.7	chr7	108378690	108378762	(50967211)	+	L1MEd	LINE/L1	1286	1364	(5722)	3720440
2440	28.6	13.2	8.5	chr7	108585867	108586633	(50759340)	+	L2a	LINE/L2	1472	2261	(1158)	3720757
31	2.6	0.0	4.7	chr7	108586634	108586676	(50759297)	+	(CCTTT)n	Simple_repeat	1	43	(0)	3720758
2244	12.1	0.3	0.0	chr7	111567556	111567853	(47778120)	+	AluSz	SINE/Alu	1	299	(13)	3724515
3140	25.4	6.0	6.2	chr7	111567854	111568398	(47777575)	+	L1MC5a	LINE/L1	2237	2773	(4)	3724514
230	28.4	7.6	3.7	chr7	111712758	111712947	(47633026)	+	L2	LINE/L2	869	1066	(2353)	3724743
349	38.8	10.0	0.7	chr7	111712997	111713411	(47632562)	+	L2	LINE/L2	1243	1700	(1719)	3724743
323	26.7	9.5	9.7	chr7	111756805	111757194	(47588779)	C	L2b	LINE/L2	(74)	3301	2913	3724796
1911	9.3	6.2	1.2	chr7	112388271	112388529	(46957444)	+	AluSz6	SINE/Alu	25	297	(15)	3725717
1727	19.3	0.0	0.4	chr7	112388530	112388838	(46957135)	+	L1MB7	LINE/L1	5825	6130	(54)	3725716
570	33.1	9.8	6.6	chr7	113148880	113149213	(46196760)	C	L2c	LINE/L2	(1539)	1880	1524	3726770
1514	25.2	6.7	1.1	chr7	113149216	113149596	(46196377)	+	MLT1I	LTR/ERVL-MaLR	1	404	(7)	3726772
2300	12.1	0.3	1.0	chr7	116949892	116950196	(42395777)	C	AluSz	SINE/Alu	(9)	303	1	3731842
64	36.5	4.4	0.0	chr7	116950227	116950247	(42395726)	+	(CTCT)n	Simple_repeat	1	23	(0)	3731843
27	2.4	4.3	4.2	chr7	116950248	116950293	(42395680)	+	(CCTT)n	Simple_repeat	1	48	(0)	3731844
64	36.5	4.4	0.0	chr7	116950294	116950587	(42395386)	+	(CTCT)n	Simple_repeat	4	310	(0)	3731845
242	25.1	1.6	3.3	chr7	117212939	117213011	(42132962)	+	MIRc	SINE/MIR	11	85	(183)	3732248
32	0.0	3.2	0.0	chr7	117871788	117871818	(41474155)	+	(AC)n	Simple_repeat	1	32	(0)	3733123
12	23.9	2.3	2.3	chr7	117871835	117871844	(41474129)	+	(CCTTCC)n	Simple_repeat	1	10	(0)	3733124
36	0.0	0.0	0.0	chr7	117871845	117871875	(41474098)	+	(CA)n	Simple_repeat	1	31	(0)	3733125
12	23.9	2.3	2.3	chr7	117871876	117871907	(41474066)	+	(CCTTCC)n	Simple_repeat	5	37	(0)	3733126
2551	4.7	3.2	0.0	chr7	119906798	119907096	(39438877)	C	AluYk4	SINE/Alu	(1)	310	2	3735708
1524	21.3	3.4	4.5	chr7	119907097	119907174	(39438799)	C	L1MA5	LINE/L1	(334)	5966	5888	3735707
48	0.0	0.0	0.0	chr7	119907179	119907219	(39438754)	+	(TG)n	Simple_repeat	1	41	(0)	3735709
1951	10.9	0.7	1.4	chr7	119907220	119907508	(39438465)	C	THE1A	LTR/ERVL-MaLR	(3)	352	66	3735710
1945	22.7	12.4	0.5	chr7	123826752	123827327	(35518646)	C	L2	LINE/L2	(674)	2745	2092	3741045
13	21.4	5.9	1.9	chr7	123827437	123827487	(35518486)	+	(TCCT)n	Simple_repeat	1	54	(0)	3741046
14	4.3	0.0	7.1	chr7	123849159	123849186	(35496787)	+	(TATG)n	Simple_repeat	1	28	(0)	3741068
46	6.0	0.0	0.0	chr7	123849266	123849318	(35496655)	+	(TC)n	Simple_repeat	1	53	(0)	3741069
2047	13.8	0.7	0.3	chr7	123849319	123849601	(35496372)	C	AluSx1	SINE/Alu	(28)	284	1	3741070
127	26.2	1.5	0.9	chr7	127418498	127418835	(31927138)	+	(ACC)n	Simple_repeat	1	343	(0)	3745716
464	30.8	0.9	0.0	chr7	127516571	127516674	(31829299)	+	L2b	LINE/L2	3238	3342	(33)	3745851
26	11.2	0.0	0.0	chr7	127516772	127516810	(31829163)	+	(AC)n	Simple_repeat	1	39	(0)	3745853
902	4.7	0.0	0.0	chr7	128697452	128697558	(30648415)	+	5S	rRNA	15	121	(0)	3747813
445	3.7	0.0	0.0	chr7	128697691	128697744	(30648229)	+	5S	rRNA	3	56	(65)	3747814
2151	21.5	3.9	2.7	chr7	128707752	128707863	(30638110)	C	L1MA10	LINE/L1	(392)	5942	5818	3747834
50	22.6	2.5	3.6	chr7	128707865	128707972	(30638001)	+	(CTTT)n	Simple_repeat	1	137	(0)	3747837
17	14.9	3.2	0.0	chr7	128707973	128708003	(30637970)	+	(TC)n	Simple_repeat	1	32	(0)	3747838
1559	20.1	2.6	4.4	chr7	128708009	128708326	(30637647)	C	AluJo	SINE/Alu	(0)	312	1	3747839
26	18.8	2.9	1.4	chr7	128860480	128860547	(30485426)	+	(CCCTCA)n	Simple_repeat	1	70	(0)	3748060
499	30.6	8.9	0.0	chr7	128860658	128860830	(30485143)	C	MIRb	SINE/MIR	(47)	221	32	3748061
12	20.7	0.0	2.9	chr7	129134775	129134809	(30211164)	+	(CTTCC)n	Simple_repeat	1	35	(0)	3748565
677	27.3	11.0	0.3	chr7	129150501	129150729	(30195244)	+	MIRb	SINE/MIR	1	257	(11)	3748600
160	28.1	3.2	4.6	chr7	130152141	130152602	(29193371)	+	A-rich	Low_complexity	70	522	(0)	3750677
235	15.2	7.6	3.2	chr7	130152603	130152803	(29193170)	+	(CA)n	Simple_repeat	800	1152	(96)	3750676
160	28.1	3.2	4.6	chr7	130152804	130152831	(29193142)	+	A-rich	Low_complexity	721	746	(0)	3750678
235	15.2	7.6	3.2	chr7	130152832	130152882	(29193091)	+	(CA)n	Simple_repeat	1153	1248	(0)	3750676
2511	21.2	2.1	7.8	chr7	131229356	131229566	(28116407)	C	MER4D	LTR/ERV1	(273)	630	438	3752412
1561	19.2	1.1	1.4	chr7	131229567	131229847	(28116126)	C	AluJb	SINE/Alu	(26)	286	7	3752414
1702	19.2	0.0	0.7	chr7	134129494	134129774	(25216199)	C	AluJo	SINE/Alu	(33)	279	1	3757007
11	25.1	2.2	2.2	chr7	134130050	134130094	(25215879)	+	(TTTCTCT)n	Simple_repeat	1	46	(0)	3757008
423	31.4	2.5	1.3	chr7	134633505	134633659	(24712314)	C	MIRc	SINE/MIR	(63)	205	49	3757776
21	29.7	4.2	3.2	chr7	134633698	134633817	(24712156)	+	(TCCT)n	Simple_repeat	1	125	(0)	3757777
238	19.1	10.0	0.0	chr7	134633848	134633910	(24712063)	C	L1ME3A	LINE/L1	(80)	6162	6093	3757778
2354	9.3	0.0	1.0	chr7	135513236	135513535	(23832438)	+	AluSq	SINE/Alu	1	297	(16)	3759077
1782	13.7	1.0	8.1	chr7	135513545	135513879	(23832094)	+	AluJb	SINE/Alu	1	311	(1)	3759078
695	23.7	12.6	2.4	chr7	136079359	136079613	(23266360)	C	L2a	LINE/L2	(0)	3426	3142	3760107
708	24.9	0.0	0.0	chr7	136079687	136079865	(23266108)	+	L4_A_Mam	LINE/RTE-X	4551	4758	(232)	3760098
1272	25.2	9.9	0.2	chr7	138049411	138049839	(21296134)	+	L1MD	LINE/L1	4479	4953	(1193)	3762794
788	20.0	0.0	0.0	chr7	138049881	138050005	(21295968)	+	AluJr	SINE/Alu	158	282	(30)	3762795
32	0.0	2.9	0.0	chr7	138050008	138050041	(21295932)	+	(AAAAC)n	Simple_repeat	1	35	(0)	3762796
2361	12.8	3.1	0.4	chr7	138050042	138050552	(21295421)	+	L1MC	LINE/L1	4949	5471	(873)	3762792
508	19.9	21.9	4.5	chr7	138225884	138226062	(21119911)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3763160
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
838	23.8	5.3	2.2	chr7	138263170	138263227	(21082746)	C	L1ME3Cz	LINE/L1	(709)	288	229	3763242
2153	12.6	0.0	4.3	chr7	138263228	138263552	(21082421)	C	AluSx	SINE/Alu	(1)	311	1	3763243
565	27.5	16.7	1.6	chr7	138352588	138352874	(20993099)	+	MLT1G	LTR/ERVL-MaLR	1	287	(304)	3763419
247	25.0	2.9	3.9	chr7	138352906	138353009	(20992964)	+	MLT1G	LTR/ERVL-MaLR	366	468	(101)	3763419
3420	8.1	5.3	0.6	chr7	138439157	138439643	(20906330)	C	LTR10F	LTR/ERV1	(0)	511	1	3763648
2140	9.5	0.4	0.4	chr7	138618379	138618652	(20727321)	+	AluSx1	SINE/Alu	1	274	(38)	3763934
38	22.1	3.4	1.9	chr7	138618653	138618833	(20727140)	+	A-rich	Low_complexity	1	183	(0)	3763935
2137	11.5	0.0	1.0	chr7	138632150	138632444	(20713529)	+	AluSx	SINE/Alu	1	292	(20)	3763962
46	28.8	5.8	1.6	chr7	138632526	138632768	(20713205)	+	G-rich	Low_complexity	1	257	(0)	3763963
2086	5.2	10.3	0.0	chr7	139091218	139091486	(20254487)	+	AluY	SINE/Alu	1	300	(11)	3764898
1603	17.7	1.1	2.8	chr7	139111661	139111942	(20234031)	+	AluJr	SINE/Alu	1	277	(35)	3764948
128	13.8	5.2	2.0	chr7	139111946	139112231	(20233742)	+	A-rich	Low_complexity	1	301	(0)	3764949
34	11.5	9.0	0.0	chr7	139218959	139219036	(20126937)	+	(CTTTC)n	Simple_repeat	1	85	(0)	3765135
2339	11.4	1.3	0.0	chr7	139219037	139219342	(20126631)	C	AluSx	SINE/Alu	(2)	310	1	3765136
258	31.9	10.0	7.7	chr7	139785843	139786076	(19559897)	+	L2c	LINE/L2	3038	3277	(110)	3766176
2236	10.5	0.7	0.0	chr7	140182523	140182816	(19163157)	+	AluSx1	SINE/Alu	1	296	(16)	3766836
28	0.0	0.0	0.0	chr7	140182817	140182843	(19163130)	+	(AAAG)n	Simple_repeat	1	27	(0)	3766837
2272	9.8	0.0	0.0	chr7	140307751	140308035	(19037938)	+	AluSq2	SINE/Alu	2	286	(27)	3767139
27	0.0	8.1	0.0	chr7	140308036	140308072	(19037901)	+	(AAAAC)n	Simple_repeat	1	40	(0)	3767140
2834	7.7	0.8	2.8	chr7	140485776	140486162	(18859811)	C	LTR8	LTR/ERV1	(0)	691	313	3767562
1959	15.0	1.6	0.7	chr7	140586237	140586366	(18759607)	+	AluSx1	SINE/Alu	1	131	(181)	3767812
48	0.0	0.0	0.0	chr7	140586367	140586407	(18759566)	+	(AC)n	Simple_repeat	1	41	(0)	3767813
1959	15.0	1.6	0.7	chr7	140586408	140586583	(18759390)	+	AluSx1	SINE/Alu	132	310	(2)	3767812
104	26.7	5.2	3.3	chr7	142887201	142887685	(16458288)	+	(GT)n	Simple_repeat	1	510	(0)	3771113
205	29.0	4.9	9.7	chr7	142932689	142932813	(16413160)	+	L2c	LINE/L2	3224	3367	(20)	3771176
557	30.7	10.9	2.1	chr7	143280415	143280647	(16065326)	+	MIR	SINE/MIR	6	261	(1)	3771683
12	25.8	5.5	0.0	chr7	143380491	143380545	(15965428)	+	(GCAGTCC)n	Simple_repeat	1	58	(0)	3771836
11	25.1	0.0	4.3	chr7	143380536	143380581	(15965392)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3771837
1737	9.1	0.0	0.4	chr7	143385714	143385944	(15960029)	C	AluSz	SINE/Alu	(82)	230	1	3771845
117	32.2	4.2	1.0	chr7	143385945	143386132	(15959841)	+	(TG)n	Simple_repeat	1	201	(0)	3771846
33	3.1	0.0	0.0	chr7	143405430	143405462	(15940511)	+	(TG)n	Simple_repeat	1	33	(0)	3771870
1609	20.4	5.1	1.4	chr7	148953064	148953421	(10392552)	+	MLT1A	LTR/ERVL-MaLR	3	374	(0)	3779683
1732	16.0	2.2	1.3	chr7	149125674	149125986	(10219987)	C	7SLRNA	srpRNA	(4)	316	1	3780093
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
3837	26.0	8.8	7.9	chr7	149465840	149466727	(9879246)	C	L1MEd	LINE/L1	(4889)	2214	1305	3780742
721	14.9	0.0	1.6	chr7	149501509	149501631	(9844342)	C	LTR1A1	LTR/ERV1	(0)	837	717	3780784
3431	13.6	0.8	1.1	chr7	149501630	149502165	(9843808)	C	LTR1A1	LTR/ERV1	(265)	534	1	3780784
1028	20.4	0.8	13.2	chr7	149696108	149696411	(9649562)	+	MER101	LTR/ERV1	7	272	(202)	3781051
411	14.1	0.0	1.6	chr7	149696411	149696474	(9649499)	+	AluJo	SINE/Alu	90	152	(160)	3781052
1496	13.9	2.7	1.2	chr7	149696462	149696716	(9649257)	+	MER101	LTR/ERV1	216	474	(0)	3781053
17	21.1	0.0	2.5	chr7	149781533	149781572	(9564401)	+	(AC)n	Simple_repeat	1	40	(0)	3781165
31	0.0	0.0	0.0	chr7	149781608	149781634	(9564339)	+	(AC)n	Simple_repeat	1	27	(0)	3781165
29	35.8	0.0	1.6	chr7	149781667	149781787	(9564186)	+	(AC)n	Simple_repeat	1	121	(0)	3781165
463	27.9	12.5	7.8	chr7	149850537	149850870	(9495103)	C	L2c	LINE/L2	(0)	3387	3036	3781237
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
473	12.1	9.2	0.8	chr7	150359153	150360260	(8985713)	+	(CA)n	Simple_repeat	1	1210	(0)	3781942
1183	17.8	6.2	3.2	chr7	150360262	150360511	(8985462)	C	MER67C	LTR/ERV1	(220)	491	234	3781941
627	33.5	1.6	7.0	chr7	150960369	150960472	(8385501)	+	MIR	SINE/MIR	173	262	(0)	3782707
466	24.7	15.7	0.0	chr7	150960522	150960687	(8385286)	+	MER5C1	DNA/hAT-Charlie	67	263	(0)	3782709
343	18.4	16.3	6.4	chr7	151008469	151008578	(8337395)	C	MIRb	SINE/MIR	(22)	246	124	3782781
18	27.5	7.3	0.0	chr7	151061675	151061774	(8284199)	+	(CTCCTCT)n	Simple_repeat	1	107	(0)	3782840
935	25.5	11.2	8.8	chr7	151965896	151966255	(7379718)	C	L1ME3C	LINE/L1	(87)	6036	5730	3784335
2508	8.9	0.0	0.3	chr7	151966256	151966568	(7379405)	C	AluSq	SINE/Alu	(1)	312	1	3784337
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
2266	11.1	0.0	1.3	chr7	152525141	152525447	(6820526)	+	AluSq2	SINE/Alu	1	303	(10)	3785358
2245	11.0	0.0	1.7	chr7	152525448	152525610	(6820363)	+	AluSx	SINE/Alu	137	296	(16)	3785357
2025	14.4	0.3	1.7	chr7	152525625	152525923	(6820050)	+	AluSz	SINE/Alu	2	296	(16)	3785359
142	31.6	0.2	0.8	chr7	152737827	152738297	(6607676)	+	(CACA)n	Simple_repeat	1	472	(0)	3785886
2931	3.8	0.0	0.0	chr7	153413808	153414153	(5931820)	C	HERV-Fc1_LTR1	LTR/ERV1	(0)	346	1	3786891
710	24.1	3.6	1.9	chr7	153414228	153414505	(5931468)	C	L1MD3	LINE/L1	(0)	7995	7784	3786892
89	18.4	5.9	5.0	chr7	153530869	153531189	(5814784)	+	(CA)n	Simple_repeat	1	340	(0)	3787054
162	23.7	2.9	0.2	chr7	154780821	154781232	(4564741)	+	(ATGG)n	Simple_repeat	1	424	(0)	3788733
688	27.3	1.3	4.2	chr7	154858142	154858382	(4487591)	C	MIR	SINE/MIR	(6)	256	23	3788838
1299	14.3	5.0	1.0	chr7	155009057	155009265	(4336708)	+	AluSz6	SINE/Alu	85	302	(10)	3789028
607	30.1	1.0	8.0	chr7	155009320	155009543	(4336430)	+	LTR33	LTR/ERVL	1	208	(307)	3789029
155	24.9	0.3	0.5	chr7	155205936	155206308	(4139665)	+	(TG)n	Simple_repeat	1	374	(0)	3789350
2088	16.9	3.1	0.5	chr7	155206545	155206954	(4139019)	C	MSTB	LTR/ERVL-MaLR	(4)	422	2	3789352
1822	21.2	1.6	0.0	chr7	155206955	155207101	(4138872)	C	MLT1B	LTR/ERVL-MaLR	(225)	165	16	3789351
401	26.3	3.3	0.0	chr7	155324002	155324119	(4021854)	+	MER94	DNA/hAT-Blackjack	2	123	(11)	3789511
322	13.7	0.0	0.0	chr7	156949057	156949107	(2396866)	C	MLT1C	LTR/ERVL-MaLR	(364)	103	53	3791612
2135	6.2	2.9	1.1	chr7	156949219	156949490	(2396483)	C	AluSx	SINE/Alu	(35)	277	1	3791613
297	27.8	8.0	0.0	chr7	157033043	157033177	(2312796)	C	MIRb	SINE/MIR	(98)	170	13	3791732
246	34.7	13.4	2.0	chr7	157033247	157033443	(2312530)	C	MIR	SINE/MIR	(1)	261	39	3791733
579	26.2	7.0	7.0	chr7	157284251	157284344	(2061629)	+	MER99	DNA/hAT?	599	682	(149)	3792193
1726	15.6	0.3	6.4	chr7	157284345	157284658	(2061315)	C	AluJo	SINE/Alu	(16)	296	2	3792194
78	31.4	1.5	0.4	chr7	157292351	157292609	(2053364)	+	(TG)n	Simple_repeat	1	263	(0)	3792210
402	7.2	10.2	2.5	chr7	157298928	157299839	(2046134)	+	(TG)n	Simple_repeat	1	981	(0)	3792224
236	36.4	0.4	0.5	chr7	158594002	158594717	(751256)	+	(GGTGGT)n	Simple_repeat	1	717	(0)	3793406
3948	13.0	3.1	0.6	chr7	158716253	158717097	(628876)	+	L1MC1	LINE/L1	4713	5581	(752)	3793598
468	15.2	0.0	2.4	chr7	158717098	158717944	(628029)	+	(CCT)n	Simple_repeat	1	847	(0)	3793599
2278	19.5	0.8	1.9	chr7	159335248	159335741	(10232)	+	TAR1	Satellite/telo	1	488	(313)	3794336
2234	13.5	0.3	0.0	chr8	8777339	8777649	(136360987)	C	AluSx1	SINE/Alu	(0)	312	1	3805321
1993	14.7	10.3	5.3	chr8	8777650	8777687	(136360949)	+	MSTA	LTR/ERVL-MaLR	395	427	(1)	3805320
4032	14.0	6.4	0.3	chr8	8777730	8778091	(136360545)	+	LTR62	LTR/ERVL	8	402	(307)	3805322
21	25.2	0.0	5.1	chr8	8893692	8893772	(136244864)	+	G-rich	Low_complexity	1	76	(0)	3805523
2336	19.0	2.9	1.7	chr8	11796765	11797241	(133341395)	C	MER66B	LTR/ERV1	(3)	483	1	3810168
184	26.7	15.1	1.9	chr8	11879363	11879465	(133259171)	C	L2b	LINE/L2	(31)	3344	3226	3810320
87	33.9	1.5	0.3	chr8	12585816	12586139	(132552497)	+	(GATG)n	Simple_repeat	1	329	(0)	3811255
36	9.5	0.0	0.0	chr8	12586142	12586197	(132552439)	+	(TGGA)n	Simple_repeat	1	56	(0)	3811256
2938	11.1	3.9	0.2	chr8	15533602	15534069	(129604567)	C	LTR19A	LTR/ERV1	(0)	486	1	3815537
2071	10.5	0.8	6.2	chr8	15534070	15534167	(129604469)	C	MER4A	LTR/ERV1	(570)	94	1	3815534
1738	25.3	3.6	1.6	chr8	18122056	18122665	(127015971)	C	MLT1B-int	LTR/ERVL-MaLR	(635)	736	1	3819211
970	25.1	0.8	2.3	chr8	18122672	18122936	(127015700)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	124	3819211
1010	18.8	0.0	0.0	chr8	18122940	18123099	(127015537)	C	AluJb	SINE/Alu	(17)	295	136	3819212
643	19.1	0.0	10.2	chr8	19769448	19769552	(125369084)	+	L1ME1	LINE/L1	5607	5702	(477)	3821746
2746	19.4	0.0	1.4	chr8	19769580	19770066	(125368570)	+	MER66B	LTR/ERV1	7	486	(0)	3821748
2017	13.9	3.7	0.0	chr8	23347037	23347158	(121791478)	+	AluSz	SINE/Alu	1	122	(190)	3827751
53	2.0	0.0	0.0	chr8	23347159	23347208	(121791428)	+	(AC)n	Simple_repeat	1	50	(0)	3827752
2017	13.9	3.7	0.0	chr8	23347209	23347373	(121791263)	+	AluSz	SINE/Alu	135	299	(13)	3827751
322	2.9	0.0	0.0	chr8	27774167	27774228	(117364408)	C	AluSc	SINE/Alu	(0)	309	247	3834964
2425	8.1	0.3	0.0	chr8	30743147	30743453	(114395183)	C	AluSg	SINE/Alu	(2)	308	1	3840345
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
355	28.8	3.7	0.6	chr8	38768661	38770089	(106368547)	+	(GT)n	Simple_repeat	1	1473	(0)	3852935
138	26.5	1.1	0.5	chr8	41827625	41827993	(103310643)	+	(CA)n	Simple_repeat	1	373	(0)	3857667
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
2339	5.2	0.0	2.1	chr8	55847662	55847976	(89290660)	C	AluY	SINE/Alu	(0)	311	1	3873033
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
180	30.4	5.5	0.0	chr8	58647361	58647429	(86491207)	C	L3	LINE/CR1	(921)	3178	3106	3876876
2428	15.9	2.6	0.5	chr8	58647445	58647861	(86490775)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3876877
1087	28.3	13.7	6.0	chr8	67054774	67055502	(78083134)	C	L2a	LINE/L2	(0)	3426	2620	3888627
4914	8.4	0.2	1.9	chr8	67366343	67366533	(77772103)	+	MER41B	LTR/ERV1	1	190	(444)	3889130
2081	11.2	0.3	2.3	chr8	67366534	67366836	(77771800)	+	AluSz	SINE/Alu	4	300	(12)	3889131
12	14.1	3.0	2.9	chr8	92095469	92095501	(53043135)	+	(GTGA)n	Simple_repeat	1	34	(0)	3923409
31	23.9	2.3	5.3	chr8	92095573	92095704	(53042932)	+	G-rich	Low_complexity	1	128	(0)	3923410
546	37.6	6.8	1.0	chr8	93501860	93502259	(51636377)	+	L2c	LINE/L2	1912	2336	(1083)	3925304
103	16.1	1.6	0.0	chr8	94233394	94233580	(50905056)	+	(CA)n	Simple_repeat	1	190	(0)	3926507
409	23.1	4.4	1.8	chr8	95226660	95226769	(49911867)	+	LTR85b	LTR/Gypsy?	65	177	(607)	3928440
465	19.2	4.8	4.8	chr8	97586994	97587097	(47551539)	+	MER96B	DNA/hAT-Tip100	1	104	(313)	3931956
3742	8.6	5.7	0.8	chr8	97778363	97778898	(47359738)	+	LTR6A	LTR/ERV1	1	564	(0)	3932416
260	32.0	6.8	3.1	chr8	100505522	100505776	(44632860)	+	L2-3_Crp	LINE/L2	744	1008	(1088)	3936915
1250	26.1	9.9	2.8	chr8	100505804	100506194	(44632442)	+	L2a	LINE/L2	2262	2683	(736)	3936912
57	7.0	4.4	0.0	chr8	101017031	101017120	(44121516)	+	(GT)n	Simple_repeat	1	94	(0)	3937987
751	13.9	1.7	1.7	chr8	101017125	101017239	(44121397)	C	AluJo	SINE/Alu	(197)	115	1	3937988
447	29.7	5.0	0.6	chr8	104622780	104622937	(40515699)	+	L2c	LINE/L2	3212	3385	(2)	3943978
55	1.8	1.8	0.0	chr8	106170690	106170744	(38967892)	+	(GT)n	Simple_repeat	1	56	(0)	3946134
15	11.1	0.0	3.2	chr8	106657558	106657588	(38481048)	+	(GCGGG)n	Simple_repeat	1	31	(0)	3946882
30	0.0	0.0	0.0	chr8	109643148	109643173	(35495463)	+	(CA)n	Simple_repeat	1	26	(0)	3951136
226	32.2	8.2	10.6	chr8	125312776	125313001	(19825635)	C	L2b	LINE/L2	(162)	3213	2994	3975308
828	9.0	0.0	1.8	chr8	125313002	125313114	(19825522)	+	L1PA8	LINE/L1	6058	6168	(4)	3975309
63	22.9	2.9	1.7	chr8	125313116	125313287	(19825349)	+	GA-rich	Low_complexity	1	177	(0)	3975310
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
290	30.6	5.0	4.1	chr8	127960208	127960333	(17178303)	C	MIR3	SINE/MIR	(52)	156	36	3980488
337	24.7	2.5	0.0	chr8	128164612	128164688	(16973948)	+	MER63B	DNA/hAT-Blackjack	308	386	(50)	3980940
22	13.0	0.0	0.0	chr8	128164697	128164730	(16973906)	+	(TG)n	Simple_repeat	1	34	(0)	3980941
449	18.9	3.5	8.3	chr8	132853352	132853449	(12285187)	C	L1MC	LINE/L1	(810)	5534	5438	3989307
2260	11.9	0.3	0.0	chr8	132853450	132853760	(12284876)	C	AluSx	SINE/Alu	(0)	312	1	3989308
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
18	18.5	4.7	6.7	chr8	141375964	141376048	(3762588)	+	(GGATCAG)n	Simple_repeat	1	89	(0)	4003560
13	14.5	3.2	0.0	chr8	141444308	141444338	(3694298)	+	(GATGAG)n	Simple_repeat	1	32	(0)	4003646
258	33.3	0.1	0.1	chr8	141469061	141469853	(3668783)	+	(GGT)n	Simple_repeat	1	794	(0)	4003674
2248	15.3	23.7	1.4	chr8	141573362	141573852	(3564784)	+	MER51A	LTR/ERV1	1	634	(0)	4003827
15	31.1	0.0	1.6	chr8	142727285	142727345	(2411291)	+	(CGCCGC)n	Simple_repeat	1	61	(0)	4005232
274	35.1	0.4	0.7	chr8	142808357	142809452	(2329184)	+	(TGTGTG)n	Simple_repeat	1	1100	(0)	4005328
2262	10.2	0.6	1.3	chr8	143247805	143248117	(1890519)	C	AluSc8	SINE/Alu	(0)	311	1	4005973
13	20.2	0.0	6.7	chr8	143294085	143294129	(1844507)	+	(CCT)n	Simple_repeat	1	45	(0)	4006030
2113	11.4	5.9	0.0	chr8	143294377	143294665	(1843971)	C	AluSc	SINE/Alu	(2)	307	1	4006031
263	28.1	0.4	0.3	chr8	143410314	143410698	(1727938)	+	(GTG)n	Simple_repeat	1	387	(0)	4006180
28	8.1	0.0	0.0	chr8	143410699	143410738	(1727898)	+	(TGG)n	Simple_repeat	1	40	(0)	4006181
263	28.1	0.4	0.3	chr8	143410739	143411029	(1727607)	+	(GTG)n	Simple_repeat	1	290	(0)	4006182
249	26.4	2.2	0.9	chr8	143418073	143418692	(1719944)	+	(CCAC)n	Simple_repeat	1	631	(0)	4006193
28	5.5	0.0	2.5	chr8	143418693	143418732	(1719904)	+	(CCAT)n	Simple_repeat	1	40	(0)	4006194
249	26.4	2.2	0.9	chr8	143418733	143418834	(1719802)	+	(CCAC)n	Simple_repeat	4	104	(0)	4006195
2957	10.0	13.7	0.0	chr8	143545687	143546127	(1592509)	+	LTR10F	LTR/ERV1	1	511	(0)	4006311
2006	20.3	1.1	6.5	chr8	143547254	143547574	(1591062)	C	MER41B	LTR/ERV1	(115)	519	201	4006313
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
236	33.3	7.5	0.0	chr9	4852487	4852597	(133542120)	+	MIRb	SINE/MIR	27	146	(122)	4015768
30	0.0	0.0	0.0	chr9	14395727	14395754	(123998963)	+	(T)n	Simple_repeat	1	28	(0)	4028919
11	20.2	2.9	0.0	chr9	14395884	14395917	(123998800)	+	G-rich	Low_complexity	1	35	(0)	4028920
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
14	13.7	3.1	0.0	chr9	15511251	15511282	(122883435)	+	(TGTGTA)n	Simple_repeat	1	33	(0)	4030659
83	26.4	0.8	3.5	chr9	19174480	19174734	(119219983)	+	(TTTC)n	Simple_repeat	1	257	(0)	4035768
37	4.9	0.0	0.0	chr9	19174746	19174788	(119219929)	+	(TTTC)n	Simple_repeat	1	43	(0)	4035768
1086	17.3	0.0	0.0	chr9	19174793	19174954	(119219763)	C	AluJb	SINE/Alu	(32)	280	119	4035769
321	38.6	2.8	0.6	chr9	27462742	27462913	(110931804)	+	L3	LINE/CR1	2542	2717	(1382)	4047195
463	19.1	2.2	0.0	chr9	36216124	36216212	(102178505)	+	L1MA10	LINE/L1	6191	6281	(53)	4060176
54	31.6	0.5	2.0	chr9	37692941	37693141	(100701576)	+	(AC)n	Simple_repeat	1	202	(0)	4063202
104	38.5	0.6	2.9	chr9	38128824	38129331	(100265386)	+	(GTG)n	Simple_repeat	1	494	(0)	4063990
551	27.3	5.0	7.1	chr9	68508320	68508587	(69886130)	C	MamTip1	DNA/hAT-Tip100	(0)	267	6	4079956
1998	11.1	6.4	0.0	chr9	72500991	72501270	(65893447)	+	AluSz	SINE/Alu	6	304	(8)	4086656
987	13.6	7.7	0.6	chr9	72586972	72587141	(65807576)	+	MER20	DNA/hAT-Charlie	34	216	(3)	4086835
656	33.6	2.6	8.0	chr9	72587143	72587160	(65807557)	C	MLT1I	LTR/ERVL-MaLR	(21)	390	377	4086836
13	21.1	0.0	6.1	chr9	76394000	76394048	(62000669)	+	(CCCCGCT)n	Simple_repeat	1	49	(0)	4092454
239	22.4	4.6	1.4	chr9	87712774	87713467	(50681250)	+	(GT)n	Simple_repeat	1	726	(0)	4109894
259	16.8	7.7	2.1	chr9	91904914	91905671	(46489046)	+	(CA)n	Simple_repeat	1	816	(0)	4115897
37	25.8	3.9	1.5	chr9	92147241	92147368	(46247349)	+	(CTTC)n	Simple_repeat	1	133	(0)	4116258
14	27.6	0.0	6.8	chr9	93808627	93808700	(44586017)	+	G-rich	Low_complexity	1	74	(0)	4118589
2290	5.1	0.0	1.1	chr9	95433840	95434114	(42960603)	C	AluY	SINE/Alu	(39)	272	1	4121231
160	22.3	0.0	1.1	chr9	95705714	95706061	(42688656)	+	(CAC)n	Simple_repeat	1	348	(0)	4121608
325	20.3	1.5	0.0	chr9	95706064	95706127	(42688590)	+	MER5A	DNA/hAT-Charlie	28	92	(97)	4121609
2105	9.5	0.3	7.0	chr9	97960587	97960913	(40433804)	C	AluSz	SINE/Alu	(7)	305	1	4125486
290	25.0	9.3	2.2	chr9	98225508	98225597	(40169120)	+	MIRc	SINE/MIR	30	126	(142)	4126108
830	30.8	6.0	4.9	chr9	98341531	98341895	(40052822)	C	L4_C_Mam	LINE/RTE-X	(171)	4967	4599	4126339
401	26.1	22.1	0.6	chr9	98833359	98833701	(39561016)	C	L2	LINE/L2	(433)	2986	2549	4127310
16	19.1	0.0	4.3	chr9	100098878	100098923	(38295794)	+	(GGCTG)n	Simple_repeat	1	46	(0)	4129547
3029	17.9	1.0	0.2	chr9	101840667	101841181	(36553536)	C	LTR53	LTR/ERVL	(0)	519	1	4132282
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
342	21.6	3.4	0.0	chr9	108094355	108094465	(30300252)	C	MIRb	SINE/MIR	(91)	177	64	4142184
699	33.4	7.9	5.4	chr9	110371462	110371977	(28022740)	+	L2	LINE/L2	2330	2859	(560)	4146188
44	0.0	0.0	0.0	chr9	112181157	112181194	(26213523)	+	(CA)n	Simple_repeat	1	38	(0)	4149324
116	31.6	0.0	0.3	chr9	114369620	114369955	(24024762)	+	(TCATCA)n	Simple_repeat	1	336	(0)	4153521
2268	9.5	1.0	0.7	chr9	120766453	120766758	(17627959)	C	AluSc	SINE/Alu	(1)	308	2	4165663
186	26.2	14.2	5.2	chr9	120766759	120766855	(17627862)	C	MIRb	SINE/MIR	(73)	195	85	4165662
474	15.4	8.8	1.9	chr9	122332051	122332156	(16062561)	+	LTR9B	LTR/ERV1	445	558	(86)	4168824
12	21.4	2.1	4.2	chr9	122332216	122332262	(16062455)	+	GA-rich	Low_complexity	1	48	(0)	4168825
2691	15.2	2.8	2.2	chr9	123309474	123309937	(15084780)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	4170466
191	28.5	9.9	1.0	chr9	124500755	124500956	(13893761)	+	L2	LINE/L2	2760	2981	(438)	4172697
344	9.4	6.6	0.3	chr9	125409649	125410266	(12984451)	+	(CA)n	Simple_repeat	1	659	(0)	4174630
229	32.3	8.7	3.2	chr9	127930409	127930556	(10464161)	C	MIR	SINE/MIR	(7)	261	92	4179358
422	26.5	16.0	1.7	chr9	127931274	127931738	(10462979)	+	L2b	LINE/L2	2785	3332	(43)	4179361
219	39.3	0.0	0.0	chr9	127935950	127936038	(10458679)	C	L2b	LINE/L2	(3)	3372	3284	4179369
23	26.9	1.4	1.3	chr9	127936072	127936145	(10458572)	+	(CCAC)n	Simple_repeat	1	75	(0)	4179370
202	33.1	12.1	4.9	chr9	127936154	127936504	(10458213)	C	L2b	LINE/L2	(0)	3387	3034	4179371
1711	27.6	11.8	1.7	chr9	128206395	128207382	(10187335)	C	L2b	LINE/L2	(0)	3375	2261	4179975
2564	6.9	0.0	0.0	chr9	128238649	128238954	(10155763)	C	AluY	SINE/Alu	(5)	306	1	4180059
1971	15.3	1.6	1.3	chr9	128238964	128238981	(10155736)	C	AluJo	SINE/Alu	(3)	309	294	4180060
28	0.0	0.0	0.0	chr9	128238982	128239008	(10155709)	+	(TCCTC)n	Simple_repeat	1	27	(0)	4180061
1971	15.3	1.6	1.3	chr9	128239009	128239296	(10155421)	C	AluJo	SINE/Alu	(19)	293	2	4180060
67	19.3	1.3	2.5	chr9	128246676	128246830	(10147887)	+	(CTCC)n	Simple_repeat	1	157	(0)	4180070
201	33.8	5.8	5.9	chr9	129069600	129069801	(9324916)	C	MIRb	SINE/MIR	(33)	235	22	4182027
16	22.6	0.0	0.0	chr9	129175064	129175096	(9219621)	+	A-rich	Low_complexity	1	33	(0)	4182242
290	37.5	10.0	0.9	chr9	129246744	129246969	(9147748)	+	L3	LINE/CR1	3224	3472	(627)	4182413
2428	7.9	0.0	0.7	chr9	129595734	129596036	(8798681)	C	AluSq2	SINE/Alu	(12)	301	1	4183212
2388	8.6	0.0	0.3	chr9	129710452	129710752	(8683965)	+	AluSc	SINE/Alu	1	300	(9)	4183457
742	20.7	7.0	5.9	chr9	129734768	129734936	(8659781)	+	FAM	SINE/Alu	1	171	(14)	4183512
166	21.5	4.2	1.1	chr9	129779560	129779992	(8614725)	+	A-rich	Low_complexity	1	451	(0)	4183616
1799	12.2	3.0	0.0	chr9	129780024	129780277	(8614440)	+	AluSx	SINE/Alu	4	265	(47)	4183617
499	34.2	1.1	2.1	chr9	129863365	129863555	(8531162)	C	MIRb	SINE/MIR	(19)	249	61	4183807
1893	13.7	0.0	5.9	chr9	129899429	129899735	(8494982)	+	AluJo	SINE/Alu	1	289	(23)	4183855
71	6.9	7.7	5.0	chr9	129899736	129899904	(8494813)	+	GA-rich	Low_complexity	1	182	(0)	4183856
434	22.6	0.0	6.2	chr9	131762816	131762928	(6631789)	+	MIR	SINE/MIR	60	165	(97)	4187648
61	27.5	2.5	4.9	chr9	132799481	132799758	(5594959)	+	(CA)n	Simple_repeat	1	285	(0)	4189526
54	15.1	1.0	1.0	chr9	132999464	132999560	(5395157)	+	GA-rich	Low_complexity	1	98	(0)	4189890
6283	15.0	1.3	0.8	chr9	133283398	133284394	(5110323)	+	LTR5B	LTR/ERVK	1	1002	(0)	4190352
490	28.8	1.7	0.1	chr9	133382445	133383799	(5010918)	+	(GTG)n	Simple_repeat	1	1378	(0)	4190491
1661	20.3	4.2	3.0	chr9	133420374	133420800	(4973917)	C	MER101	LTR/ERV1	(32)	442	11	4190547
1981	17.9	0.0	1.3	chr9	133869324	133869635	(4525082)	+	AluJr	SINE/Alu	1	308	(4)	4191190
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
397	24.8	0.1	0.2	chr9	134305527	134306423	(4088294)	+	(ATG)n	Simple_repeat	1	898	(0)	4191875
43615	7.8	0.6	0.9	chr9	135440177	135444140	(2950577)	C	HERVE-int	LTR/ERV1	(3837)	3976	1	4193232
47	6.5	1.6	0.0	chr9	135572047	135572110	(2822607)	+	(GATG)n	Simple_repeat	1	65	(0)	4193390
173	25.1	2.0	1.8	chr9	135572256	135572531	(2822186)	+	(CCAT)n	Simple_repeat	1	281	(0)	4193391
4096	11.6	4.1	0.9	chr9	135572532	135573167	(2821550)	C	MER51D	LTR/ERV1	(0)	657	1	4193392
186	39.1	0.2	0.8	chr9	136630737	136631565	(1763152)	+	(ACAC)n	Simple_repeat	1	831	(0)	4194567
307	25.0	8.8	6.8	chr9	136674425	136674557	(1720160)	+	MIRb	SINE/MIR	46	181	(87)	4194629
124	26.7	0.6	0.6	chr9	136983926	136984254	(1410463)	+	(GT)n	Simple_repeat	1	331	(0)	4195073
233	26.6	12.2	2.1	chr9	136991413	136991508	(1403209)	+	L2b	LINE/L2	3242	3348	(27)	4195077
2096	7.9	7.3	0.7	chr9	136991578	136991857	(1402860)	C	AluSx	SINE/Alu	(12)	300	1	4195088
30	0.0	3.1	0.0	chr9	137033242	137033273	(1361444)	+	(GTTT)n	Simple_repeat	1	33	(0)	4195131
420	9.3	0.0	0.0	chr9	137033301	137033354	(1361363)	+	AluSq10	SINE/Alu	23	76	(237)	4195132
1924	10.6	0.0	0.0	chr9	137033358	137033602	(1361115)	C	AluSx1	SINE/Alu	(67)	245	1	4195133
379	13.6	6.3	3.7	chr9	137900401	137901391	(493326)	+	(TGTGTC)n	Simple_repeat	1	1053	(0)	4196300
895	10.5	0.0	3.2	chr9	137901397	137901520	(493197)	C	AluSx	SINE/Alu	(87)	225	106	4196301
1226	22.5	1.1	1.1	chrX	2252903	2253169	(153787726)	+	AluJb	SINE/Alu	1	267	(45)	4362489
280	20.6	0.0	0.0	chrX	2253204	2253266	(153787629)	+	AluSx	SINE/Alu	205	267	(35)	4362484
277	21.9	0.0	0.0	chrX	2253246	2253309	(153787586)	+	Alu	SINE/Alu	197	260	(42)	4362490
334	17.2	0.0	0.0	chrX	2253352	2253409	(153787486)	+	AluSq	SINE/Alu	203	260	(53)	4362491
16	16.8	0.0	0.0	chrX	37716795	37716821	(118324074)	+	(T)n	Simple_repeat	1	27	(0)	4417834
401	30.1	1.3	4.9	chrX	38653016	38653179	(117387716)	+	MIRb	SINE/MIR	4	161	(107)	4419308
40	0.0	0.0	0.0	chrX	44899005	44899038	(111141857)	+	(GT)n	Simple_repeat	1	34	(0)	4429979
53	3.9	0.0	0.0	chrX	44899211	44899264	(111141631)	+	(GT)n	Simple_repeat	1	54	(0)	4429980
3061	24.4	5.4	10.1	chrX	48531342	48532203	(107508692)	C	MLT1B-int	LTR/ERVL-MaLR	(304)	1067	241	4436264
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
4890	11.1	2.8	7.0	chrX	80512010	80512823	(75528072)	C	LTR19C	LTR/ERV1	(0)	779	1	4471904
4734	3.8	4.3	0.0	chrX	103101559	103102113	(52938782)	+	LTR19B	LTR/ERV1	1	580	(0)	4498060
64	1.7	0.0	0.0	chrX	107742261	107742319	(48298576)	+	(GA)n	Simple_repeat	1	59	(0)	4504742
28	19.5	1.6	0.0	chrX	107742346	107742406	(48298489)	+	G-rich	Low_complexity	1	62	(0)	4504743
2288	11.9	0.0	0.3	chrX	119410606	119410917	(36629978)	+	AluSx1	SINE/Alu	1	311	(1)	4521000
2750	14.9	11.9	9.4	chrX	123846525	123846912	(32193983)	+	LTR8B	LTR/ERV1	210	654	(166)	4527500
767	12.2	19.6	0.0	chrX	123846913	123847043	(32193852)	+	AluSx3	SINE/Alu	136	298	(13)	4527501
2750	14.9	11.9	9.4	chrX	123847044	123847248	(32193647)	+	LTR8B	LTR/ERV1	655	820	(0)	4527500
13	16.3	2.8	2.7	chrX	130179784	130179819	(25861076)	+	(TGA)n	Simple_repeat	1	37	(0)	4536100
2422	7.8	0.0	0.0	chrX	136884619	136884914	(19155981)	C	AluSx1	SINE/Alu	(16)	296	1	4546781
291	31.4	0.7	1.9	chrX	136884928	136885083	(19155812)	C	L2	LINE/L2	(575)	2844	2691	4546782
14	16.4	2.9	0.0	chrX	150898886	150898919	(5141976)	+	G-rich	Low_complexity	1	35	(0)	4566676
307	38.5	7.8	1.1	chrX	152177050	152177398	(3863497)	C	L2a	LINE/L2	(2778)	641	268	4568621
424	32.6	7.2	5.1	chrX	153339691	153339819	(2701076)	C	L2b	LINE/L2	(273)	3102	2976	4570135
1020	21.2	4.4	1.8	chrX	153897815	153898135	(2142760)	C	MLT1G1	LTR/ERVL-MaLR	(302)	289	1	4570906
3294	23.8	12.7	1.7	chrX	153898137	153899030	(2141865)	+	L1MCc	LINE/L1	2962	3878	(3063)	4570905
320	12.2	0.5	0.5	chrX	156008859	156009450	(31445)	+	(GT)n	Simple_repeat	1	595	(0)	4574064