13	15.9	2.7	2.6	chr1	1033359	1033395	(247923027)	+	(GCACAC)n	Simple_repeat	1	38	(0)	1304
104	20.7	5.1	3.2	chr1	1033499	1033852	(247922570)	+	(CCAGCC)n	Simple_repeat	1	372	(0)	1305
17	10.8	0.0	0.0	chr1	1080049	1080078	(247876344)	+	(CCCCG)n	Simple_repeat	1	30	(0)	1337
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
12	15.7	2.6	5.0	chr1	1273983	1274021	(247682401)	+	G-rich	Low_complexity	1	40	(0)	1544
18	10.3	4.9	7.8	chr1	1296965	1297025	(247659397)	+	(GCACAT)n	Simple_repeat	1	64	(0)	1563
14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
15	19.8	7.5	2.8	chr1	1407559	1407625	(247548797)	+	G-rich	Low_complexity	1	72	(0)	1698
15	9.1	0.0	0.0	chr1	1512238	1512261	(247444161)	+	(CGG)n	Simple_repeat	1	24	(0)	1881
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
11	24.6	0.0	2.5	chr1	1599236	1599275	(247357147)	+	G-rich	Low_complexity	1	40	(0)	2033
15	23.1	1.9	3.6	chr1	1599531	1599584	(247356838)	+	(GGC)n	Simple_repeat	1	55	(0)	2034
15	27.4	5.0	3.6	chr1	1599643	1599722	(247356700)	+	(GC)n	Simple_repeat	1	84	(0)	2035
17	29.0	1.0	6.1	chr1	1891399	1891496	(247064926)	+	G-rich	Low_complexity	1	99	(0)	2572
12	21.1	0.0	4.8	chr1	1920053	1920094	(247036328)	+	G-rich	Low_complexity	1	42	(0)	2618
12	25.0	0.0	4.3	chr1	2019496	2019542	(246936880)	+	G-rich	Low_complexity	1	47	(0)	2779
46	33.9	1.4	2.7	chr1	2045229	2045262	(246911160)	+	(CA)n	Simple_repeat	1	34	(0)	2813
1841	16.0	2.3	1.3	chr1	2045263	2045569	(246910853)	+	AluJb	SINE/Alu	1	310	(2)	2814
21	24.3	0.0	4.1	chr1	2279575	2279647	(246676775)	+	G-rich	Low_complexity	1	73	(0)	3086
696	17.6	0.8	4.4	chr1	2279718	2279853	(246676569)	C	FLAM_C	SINE/Alu	(12)	131	1	3087
158	33.1	0.4	1.0	chr1	3114139	3114510	(245841912)	+	(CA)n	Simple_repeat	1	368	(0)	3750
26	8.5	4.0	0.0	chr1	3114511	3114560	(245841862)	+	(CACACATG)n	Simple_repeat	1	52	(0)	3751
158	33.1	0.4	1.0	chr1	3114561	3114704	(245841718)	+	(CA)n	Simple_repeat	1	145	(0)	3752
12	18.4	0.0	3.0	chr1	3471528	3471560	(245484862)	+	G-rich	Low_complexity	1	33	(0)	4027
15	14.9	2.6	2.5	chr1	3502203	3502241	(245454181)	+	G-rich	Low_complexity	1	40	(0)	4063
13	16.5	11.1	0.0	chr1	3747455	3747508	(245208914)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	4292
21	25.2	1.2	4.8	chr1	6148996	6149077	(242807345)	+	(TCC)n	Simple_repeat	1	83	(0)	7738
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
13	11.4	0.0	6.2	chr1	6249419	6249450	(242706972)	+	(GCC)n	Simple_repeat	1	32	(0)	7903
17	10.5	0.0	10.0	chr1	6393473	6393525	(242562897)	+	(CCGCC)n	Simple_repeat	1	47	(0)	8133
14	24.0	1.5	6.0	chr1	6393526	6393533	(242562889)	+	(CGCGC)n	Simple_repeat	6	67	(0)	8134
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
353	25.7	8.4	5.5	chr1	7075272	7075477	(241880945)	C	MER112	DNA/hAT-Charlie	(35)	226	15	9358
2328	11.0	0.0	0.0	chr1	7075663	7075962	(241880460)	C	AluSx	SINE/Alu	(12)	300	1	9359
203	26.6	2.0	5.3	chr1	7506406	7507273	(241449149)	+	(CACTCA)n	Simple_repeat	1	885	(0)	9916
12	13.7	0.0	0.0	chr1	7961691	7961714	(240994708)	+	(GCGT)n	Simple_repeat	1	24	(0)	10655
14	16.5	5.9	3.7	chr1	8026245	8026295	(240930127)	+	(TCGCGC)n	Simple_repeat	1	54	(0)	10773
17	11.2	0.0	0.0	chr1	8026302	8026330	(240930092)	+	(CCG)n	Simple_repeat	1	29	(0)	10774
46	0.0	0.0	0.0	chr1	8167512	8167550	(240788872)	+	(CA)n	Simple_repeat	1	39	(0)	11067
2020	6.0	2.0	8.2	chr1	8877574	8877891	(240078531)	+	AluSp	SINE/Alu	1	298	(15)	12445
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
15	8.2	12.7	3.2	chr1	8879289	8879343	(240077079)	+	(CGCCTG)n	Simple_repeat	1	62	(0)	12447
2028	19.4	4.3	2.4	chr1	9495641	9496093	(239460329)	C	L1MC1	LINE/L1	(99)	6234	5773	13716
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
252	30.2	13.8	0.8	chr1	10431043	10431162	(238525260)	+	MIRb	SINE/MIR	51	188	(80)	15780
15	20.4	0.0	2.4	chr1	10475135	10475175	(238481247)	+	(GCCCC)n	Simple_repeat	1	41	(0)	15885
39	11.9	0.0	0.0	chr1	10794135	10794199	(238162223)	+	(GT)n	Simple_repeat	1	65	(0)	16349
909	27.6	9.3	0.6	chr1	10979423	10979765	(237976657)	+	L1ME3A	LINE/L1	5459	5834	(339)	16755
2298	10.9	0.3	0.0	chr1	10979766	10980067	(237976355)	+	AluSq2	SINE/Alu	1	303	(10)	16756
12	15.6	7.3	5.1	chr1	10980159	10980213	(237976209)	+	G-rich	Low_complexity	1	59	(0)	16757
322	34.1	10.6	5.3	chr1	11013213	11013515	(237942907)	+	L2c	LINE/L2	3066	3386	(1)	16859
1532	15.4	5.4	0.4	chr1	11473431	11473676	(237482746)	+	AluJb	SINE/Alu	37	295	(17)	17786
18	9.8	3.0	0.0	chr1	11806284	11806316	(237150106)	+	(CTG)n	Simple_repeat	1	34	(0)	18488
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
2515	5.6	0.0	3.4	chr1	11909187	11909506	(237046916)	+	AluSx	SINE/Alu	1	309	(3)	18709
52	0.0	0.0	0.0	chr1	11909549	11909596	(237046826)	+	(GCCCCGCCGT)n	Simple_repeat	1	48	(0)	18710
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
275	30.5	4.5	0.0	chr1	11934297	11934401	(237022021)	C	MIR	SINE/MIR	(36)	226	117	18775
37	0.0	0.0	0.0	chr1	11944423	11944454	(237011968)	+	(AC)n	Simple_repeat	1	32	(0)	18805
570	23.0	8.3	0.7	chr1	12021451	12021628	(236934794)	C	MIR	SINE/MIR	(59)	209	24	18971
278	28.4	3.8	2.3	chr1	12021902	12022043	(236934379)	C	MIR3	SINE/MIR	(35)	173	33	18975
921	24.7	1.8	0.5	chr1	12046354	12046577	(236909845)	C	MIRb	SINE/MIR	(38)	230	4	19034
12	13.7	6.8	4.3	chr1	12166722	12166765	(236789657)	+	(GCAGG)n	Simple_repeat	1	47	(0)	19302
12	19.5	5.9	3.7	chr1	13749182	13749232	(235207190)	+	(CCGG)n	Simple_repeat	1	54	(0)	21985
13	29.7	2.3	5.6	chr1	13749236	13749322	(235207100)	+	(CGC)n	Simple_repeat	1	89	(0)	21986
17840	7.4	0.7	0.2	chr1	14287381	14291820	(234664602)	C	L1P2	LINE/L1	(1694)	4625	177	22923
16	21.0	1.4	7.1	chr1	15153699	15153767	(233802655)	+	(CCGCCTC)n	Simple_repeat	1	70	(0)	24655
200	37.7	11.5	1.7	chr1	15186196	15186546	(233769876)	C	L2	LINE/L2	(528)	2891	2502	24736
329	24.4	12.2	1.7	chr1	15186540	15186656	(233769766)	+	MIRb	SINE/MIR	99	229	(39)	24737
280	31.0	11.1	2.5	chr1	15186650	15186887	(233769535)	C	L2	LINE/L2	(475)	2944	2684	24738
345	18.7	1.3	3.9	chr1	15409471	15409548	(233546874)	C	UCON78	DNA	(215)	228	153	25190
2308	7.2	0.3	2.6	chr1	15584144	15584448	(233371974)	C	AluSx3	SINE/Alu	(13)	298	1	25593
894	24.1	14.4	3.0	chr1	16270803	16271220	(232685202)	C	L2a	LINE/L2	(19)	3407	2896	27069
60	1.6	3.2	0.0	chr1	16271240	16271302	(232685120)	+	(TG)n	Simple_repeat	1	65	(0)	27070
2188	9.9	0.0	0.0	chr1	16271308	16271580	(232684842)	C	AluSx1	SINE/Alu	(39)	273	1	27071
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
621	32.2	9.4	6.1	chr1	18255653	18256379	(230700043)	+	L2c	LINE/L2	2525	3285	(102)	31254
272	20.6	1.4	5.6	chr1	18298314	18298385	(230658037)	C	MER39	LTR/ERV1	(634)	73	5	31343
24	30.2	0.0	0.0	chr1	18949753	18949819	(230006603)	+	(GT)n	Simple_repeat	1	67	(0)	32761
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
274	23.8	0.0	0.0	chr1	19289215	19289277	(229667145)	+	L1MEc	LINE/L1	1650	1712	(4703)	33367
236	25.9	16.8	6.1	chr1	19353577	19353724	(229602698)	+	L2	LINE/L2	2684	2850	(569)	33490
12	22.5	2.3	2.3	chr1	20343348	20343390	(228613032)	+	(CGCGAG)n	Simple_repeat	1	44	(0)	35571
24	21.6	1.2	4.8	chr1	20717769	20717850	(228238572)	+	G-rich	Low_complexity	1	83	(0)	36420
44	2.3	0.0	0.0	chr1	21176568	21176611	(227779811)	+	(CGC)n	Simple_repeat	1	44	(0)	37302
42	0.0	0.0	0.0	chr1	21345885	21345920	(227610502)	+	(TG)n	Simple_repeat	1	36	(0)	37718
20	0.0	0.0	0.0	chr1	21345921	21345942	(227610480)	+	(CG)n	Simple_repeat	1	22	(0)	37719
380	32.0	3.2	0.8	chr1	21648172	21648294	(227308128)	C	MIR3	SINE/MIR	(62)	146	21	38377
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
603	25.9	6.5	1.3	chr1	21946714	21946961	(227009461)	+	MIRb	SINE/MIR	2	262	(6)	39020
1985	8.3	0.0	4.0	chr1	22451392	22451668	(226504754)	+	AluSq	SINE/Alu	40	305	(8)	40206
283	19.6	3.5	0.0	chr1	22611353	22611408	(226345014)	C	MIRc	SINE/MIR	(110)	158	101	40490
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
17	15.1	6.8	0.0	chr1	23168708	23168751	(225787671)	+	(CCG)n	Simple_repeat	1	47	(0)	41760
294	29.5	6.2	11.4	chr1	23555708	23555948	(225400474)	+	MIRb	SINE/MIR	2	232	(36)	42733
228	14.6	2.4	0.0	chr1	23556221	23556261	(225400161)	C	MIR1_Amn	SINE/MIR	(105)	125	84	42734
297	22.2	8.0	0.0	chr1	23556663	23556743	(225399679)	+	Charlie24	DNA/hAT-Charlie	2363	2450	(0)	42735
195	36.1	0.9	0.0	chr1	23557087	23557194	(225399228)	+	MIR1_Amn	SINE/MIR	57	165	(65)	42736
426	20.4	4.2	0.4	chr1	23566530	23566643	(225389779)	C	MIRc	SINE/MIR	(106)	162	49	42753
1930	10.8	0.7	3.4	chr1	23566723	23566858	(225389564)	+	AluSx	SINE/Alu	1	130	(182)	42754
2230	7.6	0.0	0.7	chr1	23566859	23567160	(225389262)	+	AluY	SINE/Alu	1	300	(11)	42755
1930	10.8	0.7	3.4	chr1	23567161	23567320	(225389102)	+	AluSx	SINE/Alu	131	289	(23)	42754
13	15.2	2.5	4.9	chr1	23743733	23743772	(225212650)	+	G-rich	Low_complexity	1	41	(0)	43265
186	36.8	2.9	0.0	chr1	23825554	23825621	(225130801)	C	L2b	LINE/L2	(24)	3351	3282	43449
1721	9.4	0.7	9.8	chr1	23825628	23825945	(225130477)	+	AluSx1	SINE/Alu	24	312	(0)	43450
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
302	16.3	11.3	2.8	chr1	25239653	25239750	(223716672)	C	FRAM	SINE/Alu	(10)	156	79	46682
19	22.9	3.6	0.0	chr1	26161955	26162010	(222794412)	+	(GGC)n	Simple_repeat	1	58	(0)	48719
15	20.0	2.5	0.0	chr1	26170107	26170146	(222786276)	+	(CGACCC)n	Simple_repeat	1	41	(0)	48734
46	0.0	0.0	0.0	chr1	26410378	26410416	(222546006)	+	(GT)n	Simple_repeat	1	39	(0)	49288
13	22.4	0.0	4.4	chr1	26410838	26410882	(222545540)	+	G-rich	Low_complexity	1	45	(0)	49289
19	8.2	0.0	0.0	chr1	26993578	26993603	(221962819)	+	(G)n	Simple_repeat	1	26	(0)	50663
18	19.9	0.0	0.0	chr1	26993890	26993930	(221962492)	+	(CCCCGA)n	Simple_repeat	1	41	(0)	50664
12	11.3	6.9	0.0	chr1	27012628	27012656	(221943766)	+	(CCGCT)n	Simple_repeat	1	31	(0)	50691
15	22.2	4.3	0.0	chr1	27031863	27031909	(221924513)	+	(CCCT)n	Simple_repeat	1	49	(0)	50749
15	13.4	0.0	10.0	chr1	27234576	27234625	(221721797)	+	(CGCAGG)n	Simple_repeat	1	50	(0)	51286
16	32.7	0.0	0.0	chr1	27234693	27234745	(221721677)	+	(GT)n	Simple_repeat	1	53	(0)	51287
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
12	32.9	0.0	4.1	chr1	27360882	27360954	(221595468)	+	(CCCCTC)n	Simple_repeat	1	73	(0)	51575
14	18.4	2.7	0.0	chr1	27392530	27392566	(221563856)	+	(GCCGC)n	Simple_repeat	1	38	(0)	51639
34	0.0	0.0	0.0	chr1	27405600	27405631	(221550791)	+	(T)n	Simple_repeat	1	32	(0)	51656
187	23.2	17.2	0.0	chr1	27525729	27525810	(221430612)	+	L2b	LINE/L2	3067	3165	(210)	51964
374	33.5	12.3	4.7	chr1	27608251	27608699	(221347723)	+	L2c	LINE/L2	2820	3320	(67)	52111
49	0.0	0.0	0.0	chr1	27608842	27608883	(221347539)	+	(GT)n	Simple_repeat	1	42	(0)	52113
30	0.0	0.0	0.0	chr1	27608903	27608928	(221347494)	+	(GT)n	Simple_repeat	1	26	(0)	52113
16	5.3	0.0	0.0	chr1	27608948	27608967	(221347455)	+	(GT)n	Simple_repeat	1	20	(0)	52113
49	0.0	0.0	0.0	chr1	27608987	27609028	(221347394)	+	(GT)n	Simple_repeat	1	42	(0)	52113
17	34.1	3.0	1.0	chr1	27662454	27662554	(221293868)	+	G-rich	Low_complexity	1	104	(0)	52250
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
2667	3.7	0.3	0.0	chr1	28089010	28089306	(220867116)	C	AluSp	SINE/Alu	(11)	302	5	53210
278	19.1	0.0	1.6	chr1	28236203	28236266	(220720156)	C	LTR16D1	LTR/ERVL	(484)	191	129	53615
41	15.7	0.0	2.4	chr1	28260101	28260183	(220696239)	+	(CCCCTC)n	Simple_repeat	1	83	(0)	53685
2302	10.5	0.0	1.3	chr1	28290039	28290344	(220666078)	C	AluSx1	SINE/Alu	(10)	302	1	53771
2317	10.6	0.0	0.0	chr1	28290345	28290647	(220665775)	C	AluSz	SINE/Alu	(9)	303	1	53772
527	26.3	0.7	4.4	chr1	28290756	28290914	(220665508)	+	L2a	LINE/L2	3271	3423	(3)	53773
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
488	10.0	3.6	4.8	chr1	28514783	28514866	(220441556)	+	Alu	SINE/Alu	1	83	(228)	54398
268	21.2	5.9	2.4	chr1	28514895	28514976	(220441446)	C	L1MEc	LINE/L1	(4368)	2032	1948	54389
1926	12.2	0.3	4.3	chr1	28514997	28515300	(220441122)	+	AluSx	SINE/Alu	2	293	(19)	54399
742	12.3	16.9	4.5	chr1	28515301	28515434	(220440988)	+	AluSx3	SINE/Alu	133	292	(19)	54400
2179	12.5	0.0	0.0	chr1	28515435	28515745	(220440677)	+	AluSz	SINE/Alu	1	311	(1)	54401
310	31.2	6.9	4.3	chr1	28519028	28519305	(220437117)	C	L2b	LINE/L2	(161)	3214	2910	54412
234	31.4	3.7	4.5	chr1	28519443	28519552	(220436870)	+	MIRc	SINE/MIR	41	149	(59)	54413
2103	8.6	1.0	3.0	chr1	28519571	28519872	(220436550)	C	AluSq	SINE/Alu	(17)	296	1	54414
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
19	23.4	1.9	8.3	chr1	28812179	28812284	(220144138)	+	G-rich	Low_complexity	1	108	(0)	55208
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
206	24.5	4.3	2.9	chr1	28885388	28885477	(220070945)	C	MIR	SINE/MIR	(33)	235	135	55403
16	22.7	3.6	3.5	chr1	29237289	29237343	(219719079)	+	(GT)n	Simple_repeat	1	57	(0)	56235
16	22.6	0.0	0.0	chr1	29237551	29237583	(219718839)	+	(GT)n	Simple_repeat	1	33	(0)	56236
438	26.9	7.1	0.0	chr1	29248966	29249095	(219707327)	C	MIR3	SINE/MIR	(35)	173	34	56247
20	16.6	0.0	0.0	chr1	29249159	29249199	(219707223)	+	(CACACA)n	Simple_repeat	1	41	(0)	56248
1059	26.9	0.8	0.4	chr1	29271537	29271786	(219684636)	+	MER102b	DNA/hAT-Charlie	49	299	(42)	56296
372	29.4	0.7	0.3	chr1	29825189	29826254	(219130168)	+	(CA)n	Simple_repeat	1	1073	(0)	57350
556	23.9	5.0	4.6	chr1	29974899	29975085	(218981337)	C	MIR3	SINE/MIR	(27)	181	1	57616
355	28.5	12.7	1.2	chr1	29975407	29975573	(218980849)	C	L1ME1	LINE/L1	(1)	6178	5990	57617
301	28.5	8.1	4.9	chr1	31373524	31373667	(217582755)	C	MIRb	SINE/MIR	(113)	155	7	60524
199	30.9	6.7	0.0	chr1	31714336	31714419	(217242003)	+	MIR3	SINE/MIR	85	174	(34)	61198
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
78	5.0	0.0	0.0	chr1	32272574	32272657	(216683765)	+	(AG)n	Simple_repeat	1	84	(0)	62487
391	31.4	0.7	7.3	chr1	32272658	32272749	(216683673)	C	L2c	LINE/L2	(313)	3074	2989	62485
225	28.2	1.0	1.0	chr1	32272759	32273434	(216682988)	+	(TG)n	Simple_repeat	1	683	(0)	62488
18	16.6	2.0	3.9	chr1	32361673	32361723	(216594699)	+	G-rich	Low_complexity	1	52	(0)	62708
13	19.1	4.5	2.2	chr1	32361906	32361949	(216594473)	+	G-rich	Low_complexity	1	46	(0)	62709
2292	7.9	3.2	0.7	chr1	32611640	32611942	(216344480)	+	AluSq2	SINE/Alu	1	311	(2)	63290
15	12.2	6.0	5.7	chr1	32886433	32886482	(216069940)	+	(CCG)n	Simple_repeat	1	53	(0)	63958
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
331	25.8	11.8	2.2	chr1	32984633	32984779	(215971643)	+	MIR3	SINE/MIR	2	156	(52)	64167
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
690	28.8	5.3	2.7	chr1	33119620	33119840	(215836582)	+	MIRb	SINE/MIR	28	254	(14)	64483
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
556	22.9	8.1	2.3	chr1	34860116	34860289	(214096133)	+	MIRb	SINE/MIR	84	268	(0)	67557
85	34.2	1.1	1.8	chr1	34928692	34929068	(214027354)	+	(AC)n	Simple_repeat	1	381	(0)	67682
39	32.2	0.0	0.0	chr1	35192740	35192869	(213763553)	+	(GCG)n	Simple_repeat	1	130	(0)	68203
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
43	4.5	0.0	0.0	chr1	35661187	35661232	(213295190)	+	(TG)n	Simple_repeat	1	46	(0)	69172
2056	11.8	1.0	2.0	chr1	35661234	35661537	(213294885)	C	AluJr	SINE/Alu	(9)	303	3	69173
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
276	32.5	2.4	0.0	chr1	36125716	36125838	(212830584)	C	L2	LINE/L2	(553)	2866	2741	70183
331	25.6	6.5	6.5	chr1	36397465	36397602	(212558820)	+	MIRc	SINE/MIR	11	148	(120)	70781
607	17.2	2.3	3.0	chr1	37020549	37020680	(211935742)	C	Charlie22a	DNA/hAT-Charlie	(256)	235	105	71963
38	2.8	0.0	0.0	chr1	37021092	37021128	(211935294)	+	(GT)n	Simple_repeat	1	37	(0)	71964
23	0.0	0.0	0.0	chr1	37021129	37021153	(211935269)	+	(AG)n	Simple_repeat	1	25	(0)	71965
13	19.4	0.0	2.7	chr1	37033072	37033108	(211923314)	+	(GCCCG)n	Simple_repeat	1	37	(0)	71985
18	23.1	1.2	7.2	chr1	37034550	37034631	(211921791)	+	(CTCCCCC)n	Simple_repeat	1	83	(0)	71986
14	16.9	0.0	2.9	chr1	37034623	37034657	(211921765)	+	(CACTCA)n	Simple_repeat	1	35	(0)	71987
13	12.9	11.6	0.0	chr1	37034806	37034848	(211921574)	+	(GCGAGAGC)n	Simple_repeat	1	48	(0)	71988
218	27.1	0.0	2.0	chr1	37235534	37235582	(211720840)	C	MIR	SINE/MIR	(195)	67	20	72322
199	23.4	9.4	4.9	chr1	37235589	37235706	(211720716)	+	UCON132b	DNA/hAT-Tip100	29	211	(94)	72323
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
16	8.2	0.0	0.0	chr1	37808747	37808772	(211147650)	+	(TGGGG)n	Simple_repeat	1	26	(0)	73489
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
13	22.0	4.8	0.0	chr1	38046030	38046071	(210910351)	+	(GCC)n	Simple_repeat	1	44	(0)	73970
275	32.6	2.1	0.0	chr1	38076052	38076146	(210880276)	+	MIR3	SINE/MIR	82	178	(30)	74035
269	34.0	3.6	0.0	chr1	38076336	38076441	(210879981)	C	MIRb	SINE/MIR	(6)	262	153	74036
22	9.8	4.8	6.2	chr1	38140398	38140459	(210815963)	+	(CACACT)n	Simple_repeat	1	65	(0)	74152
18	11.2	0.0	0.0	chr1	38270715	38270744	(210685678)	+	(GCA)n	Simple_repeat	1	30	(0)	74401
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
1987	10.3	7.6	0.7	chr1	39001284	39001565	(209954857)	C	AluSp	SINE/Alu	(10)	303	1	75827
453	22.6	2.3	5.3	chr1	39001571	39001703	(209954719)	C	AluSz6	SINE/Alu	(181)	131	3	75828
14	12.8	0.0	7.5	chr1	39491528	39491567	(209464855)	+	(CGGCCC)n	Simple_repeat	1	40	(0)	76793
15	16.9	0.0	0.0	chr1	39491773	39491805	(209464617)	+	(AGCGTC)n	Simple_repeat	1	33	(0)	76794
13	11.6	0.0	6.2	chr1	39639687	39639718	(209316704)	+	(CCCGG)n	Simple_repeat	1	32	(0)	77114
55	0.0	0.0	0.0	chr1	39701576	39701622	(209254800)	+	(CA)n	Simple_repeat	1	47	(0)	77236
298	16.0	0.0	0.0	chr1	39701653	39701702	(209254720)	+	MLT1O	LTR/ERVL-MaLR	146	195	(347)	77237
587	24.4	5.2	3.9	chr1	39702165	39702421	(209254001)	+	MIRb	SINE/MIR	3	262	(0)	77238
20	29.3	0.0	2.6	chr1	39788923	39789000	(209167422)	+	G-rich	Low_complexity	1	78	(0)	77403
13	20.1	2.0	5.8	chr1	39789020	39789070	(209167352)	+	G-rich	Low_complexity	1	52	(0)	77403
190	21.1	1.9	1.9	chr1	39799240	39799292	(209157130)	+	MIRb	SINE/MIR	118	170	(98)	77428
313	29.8	2.1	4.7	chr1	39799621	39799768	(209156654)	+	MIR3	SINE/MIR	33	176	(32)	77429
492	26.0	2.9	0.4	chr1	39799888	39800055	(209156367)	+	MIR	SINE/MIR	81	261	(7)	77430
582	33.5	1.5	1.5	chr1	39882993	39883198	(209073224)	+	MIRb	SINE/MIR	56	261	(7)	77620
512	16.5	3.0	3.0	chr1	39902544	39902643	(209053779)	+	MIRb	SINE/MIR	109	208	(60)	77653
37	2.6	0.0	0.0	chr1	40477027	40477065	(208479357)	+	(TGAA)n	Simple_repeat	1	39	(0)	78889
13	3.6	2.9	8.6	chr1	40665612	40665645	(208290777)	+	(GCTCC)n	Simple_repeat	1	35	(0)	79269
385	34.1	1.4	4.4	chr1	40773858	40774084	(208182338)	C	MIRc	SINE/MIR	(11)	257	38	79474
12	21.8	2.7	0.0	chr1	40818399	40818435	(208137987)	+	(CCCTCC)n	Simple_repeat	1	38	(0)	79568
19	23.2	0.0	3.4	chr1	40979621	40979679	(207976743)	+	(CCCGC)n	Simple_repeat	1	59	(0)	79990
919	25.4	3.4	4.5	chr1	41526225	41529535	(207426887)	+	(CACCCT)n	Simple_repeat	6	3273	(0)	80966
37	2.9	0.0	0.0	chr1	42147141	42147176	(206809246)	+	(GT)n	Simple_repeat	1	36	(0)	81995
253	23.6	1.0	0.5	chr1	42147265	42147335	(206809087)	C	L4_B_Mam	LINE/RTE-X	(201)	4740	4695	81996
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
925	27.8	13.8	0.7	chr1	43009014	43009600	(205946822)	+	L1ME4a	LINE/L1	5292	5967	(157)	83569
14	24.5	2.9	4.3	chr1	43349055	43349122	(205607300)	+	G-rich	Low_complexity	1	70	(0)	84191
209	26.6	5.3	20.6	chr1	43885793	43885895	(205070527)	C	L2c	LINE/L2	(173)	3214	3108	85098
13	24.9	0.0	0.0	chr1	43946812	43946849	(205009573)	+	(GCCGG)n	Simple_repeat	1	38	(0)	85206
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
17	18.6	3.1	7.6	chr1	44524575	44524638	(204431784)	+	(TC)n	Simple_repeat	1	66	(0)	86194
19	17.3	2.4	2.3	chr1	44543534	44543575	(204412847)	+	GA-rich	Low_complexity	1	43	(0)	86231
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
1929	12.3	1.7	0.3	chr1	44777086	44777370	(204179052)	C	AluSz	SINE/Alu	(23)	289	1	86691
12	19.3	0.0	5.1	chr1	44784486	44784524	(204171898)	+	(GCGG)n	Simple_repeat	1	39	(0)	86706
13	15.5	0.0	3.2	chr1	44813962	44813992	(204142430)	+	G-rich	Low_complexity	1	31	(0)	86752
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
2050	12.3	2.0	0.0	chr1	44843552	44843843	(204112579)	C	AluSx	SINE/Alu	(14)	298	1	86817
20	3.8	0.0	0.0	chr1	44987000	44987026	(203969396)	+	(TTG)n	Simple_repeat	1	27	(0)	87149
2598	3.0	0.0	1.3	chr1	44987027	44987330	(203969092)	C	AluY	SINE/Alu	(11)	300	1	87150
19	13.9	2.3	2.3	chr1	46133199	46133241	(202823181)	+	A-rich	Low_complexity	1	44	(0)	89405
21	20.1	0.0	0.0	chr1	46247477	46247516	(202708906)	+	(C)n	Simple_repeat	1	40	(0)	89651
20	18.5	0.0	0.0	chr1	46467374	46467416	(202489006)	+	(GTGTGT)n	Simple_repeat	1	43	(0)	90104
16	24.5	0.0	0.0	chr1	46718973	46719016	(202237406)	+	(CTCCGG)n	Simple_repeat	1	44	(0)	90530
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
281	35.5	7.1	3.1	chr1	47984594	47984972	(200971450)	+	L2c	LINE/L2	2978	3366	(9)	92683
250	29.0	0.0	1.5	chr1	48226941	48227682	(200728740)	+	(GT)n	Simple_repeat	1	742	(0)	93042
12	28.8	0.0	0.0	chr1	50420998	50421039	(198535383)	+	(GCTCCC)n	Simple_repeat	1	42	(0)	96744
35	28.8	1.5	2.3	chr1	50421374	50421504	(198534918)	+	(GCC)n	Simple_repeat	1	133	(0)	96745
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
17	4.3	0.0	0.0	chr1	52056281	52056304	(196900118)	+	(CCG)n	Simple_repeat	1	24	(0)	100081
13	15.2	2.5	4.9	chr1	52365969	52366008	(196590414)	+	(CCGCG)n	Simple_repeat	1	41	(0)	100699
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
184	36.2	10.2	0.6	chr1	52632756	52632933	(196323489)	+	MIRb	SINE/MIR	2	198	(70)	101303
859	28.7	10.0	4.4	chr1	52697872	52697999	(196258423)	+	L2a	LINE/L2	3247	3371	(55)	101487
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
1095	29.3	11.2	2.4	chr1	53237694	53238196	(195718226)	+	L2a	LINE/L2	2854	3425	(1)	102707
258	16.7	3.0	1.5	chr1	53634648	53634714	(195321708)	+	LTR16E2	LTR/ERVL	13	80	(488)	103454
343	28.9	2.6	0.0	chr1	53634734	53634847	(195321575)	+	LTR16E2	LTR/ERVL	202	318	(250)	103454
390	21.3	11.6	1.6	chr1	53634882	53635005	(195321417)	+	LTR16E2	LTR/ERVL	431	568	(0)	103454
475	18.3	2.5	2.5	chr1	53635085	53635202	(195321220)	C	L2a	LINE/L2	(1626)	1793	1676	103451
352	20.4	27.5	0.0	chr1	54500039	54500175	(194456247)	+	MIRb	SINE/MIR	37	225	(43)	105227
22	11.9	0.0	0.0	chr1	55039870	55039906	(193916516)	+	(GCT)n	Simple_repeat	1	37	(0)	106404
189	24.2	5.7	0.0	chr1	55040106	55040171	(193916251)	+	MIR3	SINE/MIR	109	178	(30)	106405
265	35.8	9.5	3.6	chr1	55323942	55324109	(193632313)	+	LTR81B	LTR/Gypsy	1047	1225	(168)	106876
19	10.4	0.0	0.0	chr1	58577094	58577124	(190379298)	+	(CAG)n	Simple_repeat	1	31	(0)	113109
599	28.3	11.5	3.9	chr1	58699297	58699528	(190256894)	C	MIRb	SINE/MIR	(14)	254	3	113337
256	28.3	2.7	3.2	chr1	58699561	58699660	(190256762)	C	MIRb	SINE/MIR	(149)	119	8	113338
19	32.5	0.0	0.0	chr1	58782402	58782467	(190173955)	+	(CTG)n	Simple_repeat	1	66	(0)	113504
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
351	31.6	3.9	2.3	chr1	58814820	58814994	(190141428)	+	MIRb	SINE/MIR	45	222	(46)	113579
215	27.2	17.4	0.9	chr1	58903525	58903639	(190052783)	C	MIRb	SINE/MIR	(12)	256	119	113783
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
186	29.4	5.2	5.2	chr1	59078054	59078168	(189878254)	C	MIR	SINE/MIR	(29)	233	119	114145
425	29.8	4.4	2.6	chr1	59078420	59078574	(189877848)	+	MIRb	SINE/MIR	40	197	(71)	114146
78	6.6	3.6	0.0	chr1	61588982	61589093	(187367329)	+	(TC)n	Simple_repeat	1	116	(0)	118399
32	17.2	0.0	0.0	chr1	61589557	61589611	(187366811)	+	(TG)n	Simple_repeat	1	55	(0)	118400
1519	16.1	7.2	1.9	chr1	61844456	61844654	(187111768)	+	MER44A	DNA/TcMar-Tigger	5	227	(112)	118962
2127	12.4	4.5	1.6	chr1	61844655	61845024	(187111398)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	118963
1519	16.1	7.2	1.9	chr1	61845025	61845141	(187111281)	+	MER44A	DNA/TcMar-Tigger	228	339	(0)	118962
680	20.3	0.8	0.0	chr1	62963508	62963650	(185992772)	+	MIRb	SINE/MIR	42	192	(76)	121124
597	24.8	2.0	5.1	chr1	63189530	63189686	(185766736)	+	MIRb	SINE/MIR	117	268	(0)	121567
236	29.5	0.0	1.6	chr1	63189853	63189914	(185766508)	C	MER5A	DNA/hAT-Charlie	(34)	155	95	121568
267	23.5	6.8	1.4	chr1	63189936	63190004	(185766418)	C	MER91C	DNA/hAT-Tip100	(32)	108	36	121569
232	34.0	2.1	1.1	chr1	63190010	63190104	(185766318)	C	MER5A	DNA/hAT-Charlie	(93)	96	1	121568
18	18.3	0.0	0.0	chr1	63324434	63324470	(185631952)	+	(CCG)n	Simple_repeat	1	37	(0)	121841
13	23.6	0.0	2.4	chr1	63324567	63324608	(185631814)	+	(CCCGGT)n	Simple_repeat	1	42	(0)	121842
15	5.6	0.0	0.0	chr1	63775171	63775189	(185181233)	+	(GC)n	Simple_repeat	1	19	(0)	122682
12	10.3	6.1	2.9	chr1	64494020	64494052	(184462370)	+	G-rich	Low_complexity	1	35	(0)	123996
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
14	4.3	4.2	0.0	chr1	65309511	65309534	(183646888)	+	(CTCC)n	Simple_repeat	1	25	(0)	125553
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
28	16.5	0.0	0.0	chr1	67342194	67342241	(181614181)	+	(T)n	Simple_repeat	1	48	(0)	128666
23	17.8	0.0	0.0	chr1	69568269	69568313	(179388109)	+	(CGC)n	Simple_repeat	1	45	(0)	132182
15	18.7	4.4	2.1	chr1	69568484	69568528	(179387894)	+	(CTC)n	Simple_repeat	1	47	(0)	132183
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
14	25.5	0.0	4.0	chr1	71047615	71047664	(177908758)	+	(GCG)n	Simple_repeat	1	50	(0)	134342
15	22.0	0.0	2.3	chr1	75616217	75616291	(173340131)	+	(CCACCCC)n	Simple_repeat	1	73	(0)	140188
12	22.1	0.0	0.0	chr1	77281649	77281680	(171674742)	+	(GTGTGT)n	Simple_repeat	1	32	(0)	142614
12	20.6	1.7	8.3	chr1	77281880	77281938	(171674484)	+	(GCGCG)n	Simple_repeat	1	60	(0)	142615
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
37	15.9	0.0	0.0	chr1	84078068	84078133	(164878289)	+	(CCG)n	Simple_repeat	1	66	(0)	152037
20	15.7	7.9	3.7	chr1	84505927	84506006	(164450416)	+	(CCCG)n	Simple_repeat	1	83	(0)	152615
13	14.7	3.3	0.0	chr1	84506304	84506333	(164450089)	+	GA-rich	Low_complexity	1	31	(0)	152616
20	0.0	0.0	0.0	chr1	85464590	85464611	(163491811)	+	(AC)n	Simple_repeat	1	22	(0)	154198
23	11.1	0.0	0.0	chr1	85576952	85576990	(163379432)	+	(ACCGCC)n	Simple_repeat	1	39	(0)	154399
16	18.3	3.8	3.6	chr1	85577104	85577156	(163379266)	+	G-rich	Low_complexity	1	55	(0)	154400
40	0.0	0.0	0.0	chr1	85580463	85580496	(163375926)	+	(AC)n	Simple_repeat	1	34	(0)	154403
73	1.5	0.0	0.0	chr1	85580533	85580599	(163375823)	+	(AC)n	Simple_repeat	1	67	(0)	154403
17	18.5	0.0	0.0	chr1	87201274	87201306	(161755116)	+	A-rich	Low_complexity	1	33	(0)	156717
27866	2.0	0.0	0.0	chr1	88341843	88347867	(160608555)	+	L1PA2	LINE/L1	127	6150	(5)	158353
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
16	26.7	0.0	5.7	chr1	92961519	92961588	(155994834)	+	(CCCGG)n	Simple_repeat	1	70	(0)	165428
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
27	0.0	0.0	0.0	chr1	93346087	93346112	(155610310)	+	(GCAGCG)n	Simple_repeat	1	26	(0)	166155
23	15.9	2.0	1.9	chr1	93346157	93346207	(155610215)	+	(GGC)n	Simple_repeat	1	52	(0)	166156
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
269	39.2	3.2	0.0	chr1	96522785	96522904	(152433518)	C	L2b	LINE/L2	(5)	3370	3247	170770
16	8.6	7.5	2.3	chr1	98048583	98048622	(150907800)	+	(CCTCCAC)n	Simple_repeat	1	43	(0)	172871
13	5.3	0.0	0.0	chr1	99970237	99970256	(148986166)	+	(GGA)n	Simple_repeat	1	20	(0)	175723
201	30.0	4.3	6.2	chr1	100037817	100037912	(148918510)	+	MIRb	SINE/MIR	96	189	(79)	175849
36	0.0	0.0	0.0	chr1	100351974	100352004	(148604418)	+	(GT)n	Simple_repeat	1	31	(0)	176447
15	10.8	3.3	0.0	chr1	100352058	100352087	(148604335)	+	(AGAAAG)n	Simple_repeat	1	31	(0)	176448
12	13.9	0.0	0.0	chr1	100896110	100896133	(148060289)	+	(GTGT)n	Simple_repeat	1	24	(0)	177180
25	24.6	0.0	0.0	chr1	101996930	101996989	(146959433)	+	(AGC)n	Simple_repeat	1	60	(0)	178764
12	12.6	3.7	0.0	chr1	107056667	107056693	(141899729)	+	(CCGCG)n	Simple_repeat	1	28	(0)	184892
13	23.6	1.9	3.7	chr1	108200192	108200244	(140756178)	+	G-rich	Low_complexity	1	54	(0)	186508
15	20.3	4.4	0.0	chr1	108661127	108661171	(140295251)	+	(CCGCGC)n	Simple_repeat	1	47	(0)	187089
445	23.2	1.9	1.5	chr1	108963593	108963725	(139992697)	C	Charlie15b	DNA/hAT-Charlie	(16)	1045	926	187650
831	16.9	6.9	0.0	chr1	109099836	109099983	(139856439)	+	FRAM	SINE/Alu	1	159	(17)	187985
29	18.2	1.6	0.0	chr1	109484573	109484634	(139471788)	+	(TCCA)n	Simple_repeat	1	63	(0)	188669
47	0.0	0.0	0.0	chr1	109656551	109656590	(139299832)	+	(TG)n	Simple_repeat	1	40	(0)	188913
13	16.2	0.0	0.0	chr1	110150525	110150552	(138805870)	+	(CGCTC)n	Simple_repeat	1	28	(0)	189641
359	27.6	3.7	0.0	chr1	110156335	110156439	(138799983)	+	Charlie17b	DNA/hAT-Charlie	1	109	(1095)	189647
13	25.2	0.0	2.3	chr1	111738771	111738814	(137217608)	+	(CGCACCC)n	Simple_repeat	1	44	(0)	191992
383	26.9	9.9	0.0	chr1	112465988	112466132	(136490290)	+	MIRb	SINE/MIR	89	249	(19)	193160
445	30.6	12.8	0.5	chr1	114154062	114154245	(134802177)	+	MIRc	SINE/MIR	41	250	(18)	196145
22	0.0	0.0	0.0	chr1	115641538	115641561	(133314861)	+	(TG)n	Simple_repeat	1	24	(0)	198478
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
19	14.4	0.0	0.0	chr1	145280999	145281039	(103675383)	+	(G)n	Simple_repeat	1	41	(0)	210763
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
674	0.0	0.0	0.0	chr1	146039401	146039474	(102916948)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	211996
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
17	17.4	0.0	2.9	chr1	147540964	147540998	(101415424)	+	(CT)n	Simple_repeat	1	35	(0)	214257
115	0.0	2.8	0.0	chr1	147541071	147541178	(101415244)	+	(GA)n	Simple_repeat	1	111	(0)	214258
41	6.0	0.0	0.0	chr1	147541179	147541230	(101415192)	+	(TG)n	Simple_repeat	1	52	(0)	214259
20	16.6	6.8	3.9	chr1	147541295	147541367	(101415055)	+	GA-rich	Low_complexity	1	78	(0)	214260
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
20	23.9	0.0	0.0	chr1	150163397	150163441	(98792981)	+	(AC)n	Simple_repeat	1	45	(0)	218432
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
236	27.2	8.0	3.7	chr1	151131012	151131118	(97825304)	C	MIRc	SINE/MIR	(112)	156	45	220587
53	0.0	0.0	0.0	chr1	151511436	151511483	(97444939)	+	(GCCCGA)n	Simple_repeat	1	48	(0)	221378
20	25.3	4.3	0.0	chr1	151612252	151612321	(97344101)	+	(CGG)n	Simple_repeat	1	73	(0)	221596
710	29.2	10.6	10.1	chr1	152870655	152871394	(96085028)	C	LTR41B	LTR/ERVL	(13)	745	2	223330
24	12.1	0.0	0.0	chr1	152871416	152871451	(96084971)	+	(CA)n	Simple_repeat	1	36	(0)	223331
2045	11.4	0.7	0.7	chr1	153745162	153745458	(95210964)	C	AluSx	SINE/Alu	(15)	297	1	224702
321	26.6	3.1	3.9	chr1	153966966	153967094	(94989328)	+	MIRc	SINE/MIR	124	251	(17)	225150
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
15	28.9	2.7	2.6	chr1	154220842	154220916	(94735506)	+	G-rich	Low_complexity	1	77	(0)	225710
13	8.7	4.0	0.0	chr1	154502729	154502753	(94453669)	+	(CCACT)n	Simple_repeat	1	26	(0)	226305
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
1986	9.9	0.0	4.5	chr1	154608330	154608641	(94347781)	C	AluSz	SINE/Alu	(14)	298	1	226476
209	31.6	5.9	0.0	chr1	154609461	154609555	(94346867)	+	L2c	LINE/L2	2981	3081	(306)	226479
273	32.1	1.2	1.2	chr1	154609726	154609810	(94346612)	C	L2b	LINE/L2	(0)	3375	3291	226480
181	25.6	10.3	7.1	chr1	154609870	154609953	(94346469)	+	L2c	LINE/L2	3248	3334	(53)	226479
1620	11.8	0.9	0.0	chr1	154936082	154936310	(94020112)	C	AluSx3	SINE/Alu	(11)	300	70	227084
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
15	9.1	0.0	0.0	chr1	155081930	155081953	(93874469)	+	(CGC)n	Simple_repeat	1	24	(0)	227307
474	26.3	3.3	1.7	chr1	155125809	155125928	(93830494)	C	L2a	LINE/L2	(1)	3425	3304	227409
554	14.9	0.0	0.0	chr1	155226863	155226965	(93729457)	C	FLAM_C	SINE/Alu	(90)	212	38	227580
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
11	13.2	5.7	2.7	chr1	156054978	156055012	(92901410)	+	(CGAGCGG)n	Simple_repeat	1	37	(0)	229385
18	26.1	0.0	4.6	chr1	156282735	156282799	(92673623)	+	(CCG)n	Simple_repeat	1	65	(0)	229845
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
326	34.8	11.4	1.4	chr1	156572876	156573482	(92382940)	C	L2c	LINE/L2	(41)	3346	2686	230361
15	14.7	0.0	0.0	chr1	156624895	156624924	(92331498)	+	(CCGC)n	Simple_repeat	1	30	(0)	230474
265	31.0	14.5	4.5	chr1	156656475	156656653	(92299769)	+	MIRb	SINE/MIR	66	265	(3)	230530
31	23.7	0.0	0.0	chr1	156660382	156660448	(92295974)	+	(GT)n	Simple_repeat	1	67	(0)	230532
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
215	27.3	3.0	1.5	chr1	156752099	156752165	(92204257)	C	L2c	LINE/L2	(1)	3374	3307	230675
412	34.5	9.3	2.5	chr1	159913388	159913708	(89042714)	C	Plat_L3	LINE/CR1	(167)	3419	3075	234945
13	8.1	3.6	3.5	chr1	159914145	159914172	(89042250)	+	(CTC)n	Simple_repeat	1	29	(0)	234946
13	21.9	1.9	5.6	chr1	159945550	159945602	(89010820)	+	(CTCCG)n	Simple_repeat	1	54	(0)	234978
19	13.7	2.4	2.3	chr1	160098411	160098452	(88857970)	+	(AGC)n	Simple_repeat	1	43	(0)	235223
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
449	31.9	7.1	1.1	chr1	160651940	160652123	(88304299)	C	MIRb	SINE/MIR	(65)	203	8	236078
6789	10.8	0.8	1.0	chr1	160652139	160653095	(88303327)	+	LTR5_Hs	LTR/ERVK	1	955	(13)	236079
12	19.7	0.0	0.0	chr1	161013778	161013806	(87942616)	+	(TCCC)n	Simple_repeat	1	29	(0)	236696
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
264	17.4	2.1	0.0	chr1	162091940	162091985	(86864437)	C	Plat_L3	LINE/CR1	(2)	3584	3538	238587
251	27.3	0.0	6.1	chr1	162091988	162092069	(86864353)	C	MIR3	SINE/MIR	(42)	166	90	238588
79	34.2	0.0	0.4	chr1	163408348	163408597	(85547825)	+	(CA)n	Simple_repeat	1	250	(0)	240720
15	4.6	17.8	0.0	chr1	165698592	165698636	(83257786)	+	G-rich	Low_complexity	1	53	(0)	244109
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
2182	9.9	1.0	0.3	chr1	167121018	167121309	(81835113)	C	AluSq2	SINE/Alu	(19)	294	1	246181
497	30.3	8.3	7.1	chr1	167713126	167713261	(81243161)	+	HAL1b	LINE/L1	557	698	(1723)	247177
16	11.5	3.2	3.1	chr1	167713451	167713481	(81242941)	+	GA-rich	Low_complexity	1	32	(0)	247179
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
1509	9.2	5.7	0.0	chr1	172278323	172278539	(76677883)	C	MER30	DNA/hAT-Charlie	(0)	230	1	254026
43	23.6	1.3	5.2	chr1	173477142	173477294	(75479128)	+	(CCGGC)n	Simple_repeat	1	155	(0)	255658
2252	11.2	1.7	0.3	chr1	173862266	173862550	(75093872)	C	AluSg	SINE/Alu	(21)	289	1	256233
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
41	14.1	0.0	1.4	chr1	178093761	178093834	(70862588)	+	(GCCGCC)n	Simple_repeat	1	74	(0)	262569
14	21.1	0.0	6.1	chr1	178094013	178094061	(70862361)	+	(GGC)n	Simple_repeat	1	49	(0)	262570
14	15.8	0.0	5.1	chr1	178094065	178094103	(70862319)	+	(CCCAG)n	Simple_repeat	1	39	(0)	262571
14	19.3	6.4	0.0	chr1	178094104	178094109	(70862313)	+	(CCCCAG)n	Simple_repeat	3	50	(0)	262572
13	15.2	0.0	3.2	chr1	179082230	179082260	(69874162)	+	G-rich	Low_complexity	1	31	(0)	264111
216	26.2	1.2	6.7	chr1	179591445	179591534	(69364888)	+	MER5A	DNA/hAT-Charlie	86	170	(19)	265041
44	2.4	0.0	0.0	chr1	179815110	179815151	(69141271)	+	(CA)n	Simple_repeat	1	42	(0)	265353
17	21.0	6.7	2.5	chr1	180154746	180154820	(68801602)	+	G-rich	Low_complexity	1	80	(0)	265970
18	7.8	0.0	0.0	chr1	180154924	180154972	(68801450)	+	(GCT)n	Simple_repeat	1	49	(0)	265971
14	23.1	1.9	3.6	chr1	180229384	180229437	(68726985)	+	G-rich	Low_complexity	1	55	(0)	266081
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
11	10.2	2.7	7.9	chr1	181482618	181482654	(67473768)	+	(GCCTCT)n	Simple_repeat	1	38	(0)	268056
17	29.0	0.0	1.7	chr1	181482800	181482859	(67473563)	+	(CGCC)n	Simple_repeat	1	60	(0)	268057
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
13	15.1	5.1	2.4	chr1	183471444	183471500	(65484922)	+	(CGCC)n	Simple_repeat	1	58	(0)	271187
345	26.1	12.2	0.9	chr1	184384245	184384360	(64572062)	+	Arthur1A	DNA/hAT-Tip100	47	177	(0)	272558
41	4.1	1.9	1.9	chr1	184386769	184386820	(64569602)	+	(AC)n	Simple_repeat	1	53	(0)	272566
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
2405	16.5	1.8	2.5	chr1	184669404	184669851	(64286571)	C	MER65A	LTR/ERV1	(0)	445	1	273018
852	31.4	11.8	7.4	chr1	184669855	184670218	(64286204)	+	L4_B_Mam	LINE/RTE-X	2801	3215	(1726)	273015
21	22.2	1.3	5.3	chr1	185317244	185317318	(63639104)	+	(GCC)n	Simple_repeat	1	76	(0)	274052
18	9.3	0.0	7.3	chr1	185317384	185317424	(63638998)	+	(GCCCC)n	Simple_repeat	1	41	(0)	274053
13	18.3	0.0	3.0	chr1	185734404	185734436	(63221986)	+	(GGC)n	Simple_repeat	1	33	(0)	274707
50	4.0	0.0	0.0	chr1	190478703	190478754	(58477668)	+	(TC)n	Simple_repeat	1	52	(0)	280953
13	12.2	3.7	0.0	chr1	192808661	192808687	(56147735)	+	(CGC)n	Simple_repeat	1	28	(0)	283883
21	20.9	2.8	4.0	chr1	193105439	193105510	(55850912)	+	(CCCGC)n	Simple_repeat	1	74	(0)	284362
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
213	29.6	9.3	3.9	chr1	198701448	198701549	(50254873)	+	L2a	LINE/L2	3312	3419	(7)	291582
319	27.1	4.1	4.8	chr1	198701648	198701771	(50254651)	+	Tigger9a	DNA/TcMar-Tigger	1	123	(609)	291583
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
14	15.9	0.0	0.0	chr1	200738938	200738965	(48217457)	+	(GCG)n	Simple_repeat	1	28	(0)	294914
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
329	28.6	3.8	7.2	chr1	201309567	201309732	(47646690)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3652	295814
450	25.3	10.6	0.5	chr1	201309738	201309909	(47646513)	+	MER20B	DNA/hAT-Charlie	32	219	(0)	295815
11	14.4	7.5	2.3	chr1	201399325	201399364	(47557058)	+	(GGCCGCC)n	Simple_repeat	1	43	(0)	295946
42	0.0	0.0	0.0	chr1	201435916	201435951	(47520471)	+	(TG)n	Simple_repeat	1	36	(0)	296005
20	16.3	0.0	0.0	chr1	201435953	201435987	(47520435)	+	GA-rich	Low_complexity	1	35	(0)	296006
516	26.6	3.5	0.0	chr1	201448770	201448908	(47507514)	+	MIRc	SINE/MIR	60	203	(65)	296033
2244	7.7	0.3	2.0	chr1	201481410	201481707	(47474715)	+	AluSp	SINE/Alu	1	293	(20)	296101
13	16.5	0.0	0.0	chr1	201829212	201829238	(47127184)	+	(GGC)n	Simple_repeat	1	27	(0)	296704
15	26.2	5.1	0.0	chr1	201982924	201982982	(46973440)	+	(GGC)n	Simple_repeat	1	62	(0)	296983
18	20.8	3.5	1.7	chr1	202214419	202214475	(46741947)	+	G-rich	Low_complexity	1	59	(0)	297499
749	6.8	0.0	3.7	chr1	202692991	202693097	(46263325)	C	L1PB1	LINE/L1	(1)	6150	6048	298322
12	28.1	1.9	1.9	chr1	202808521	202808573	(46147849)	+	(CCCGC)n	Simple_repeat	1	54	(0)	298520
43	2.5	0.0	0.0	chr1	203054672	203054712	(45901710)	+	(AC)n	Simple_repeat	1	41	(0)	298981
564	22.3	5.1	0.7	chr1	203054729	203054877	(45901545)	C	Charlie18a	DNA/hAT-Charlie	(57)	285	130	298982
22	12.8	0.0	0.0	chr1	203054913	203054946	(45901476)	+	(TG)n	Simple_repeat	1	34	(0)	298983
473	22.9	0.0	16.5	chr1	203220088	203220202	(45736220)	C	L2a	LINE/L2	(3)	3423	3289	299244
325	30.4	9.7	3.7	chr1	203291080	203291243	(45665179)	+	MIRc	SINE/MIR	88	262	(6)	299359
2479	9.0	0.0	0.6	chr1	203984711	203985021	(44971401)	+	AluSx4	SINE/Alu	2	310	(0)	300722
2096	11.2	0.0	1.1	chr1	204077794	204078114	(44878308)	C	AluSz	SINE/Alu	(0)	312	1	300940
30	6.0	0.0	0.0	chr1	204336554	204336588	(44619834)	+	(GT)n	Simple_repeat	1	35	(0)	301375
12	8.3	9.5	4.3	chr1	205061438	205061479	(43894943)	+	(CCTTCCCG)n	Simple_repeat	1	46	(0)	302717
239	25.0	1.4	2.9	chr1	205295043	205295112	(43661310)	C	MER5A	DNA/hAT-Charlie	(6)	183	115	303160
12	13.1	0.0	9.8	chr1	205344084	205344124	(43612298)	+	(CCCCCG)n	Simple_repeat	1	41	(0)	303253
30	35.2	0.0	0.0	chr1	205456728	205456827	(43499595)	+	(CA)n	Simple_repeat	1	100	(0)	303462
337	27.6	7.1	0.0	chr1	205458879	205458983	(43497439)	C	MIRb	SINE/MIR	(57)	211	99	303465
354	26.7	3.1	0.0	chr1	205459299	205459390	(43497032)	+	MIRb	SINE/MIR	99	197	(71)	303466
29	12.4	0.0	0.0	chr1	209428440	209428483	(39527939)	+	(CA)n	Simple_repeat	1	44	(0)	309633
403	23.7	8.2	4.9	chr1	209806572	209806713	(39149709)	+	MIRb	SINE/MIR	22	168	(100)	310210
21	8.8	0.0	2.6	chr1	209937687	209937724	(39018698)	+	(CAAAA)n	Simple_repeat	1	38	(0)	310410
25	10.7	3.9	1.9	chr1	209937987	209938038	(39018384)	+	(GGTGG)n	Simple_repeat	1	54	(0)	310411
19	8.1	0.0	0.0	chr1	210311118	210311143	(38645279)	+	(C)n	Simple_repeat	1	26	(0)	310954
48	0.0	0.0	0.0	chr1	210311160	210311200	(38645222)	+	(AC)n	Simple_repeat	1	41	(0)	310955
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
19	22.4	4.8	0.0	chr1	211578138	211578199	(37378223)	+	(GGCCGT)n	Simple_repeat	1	65	(0)	312973
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
1775	13.0	0.7	6.7	chr1	212857369	212857684	(36098738)	C	AluJb	SINE/Alu	(15)	297	1	315326
950	17.4	1.1	0.0	chr1	212857841	212858012	(36098410)	+	MER41D	LTR/ERV1	384	557	(0)	315327
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
15	11.6	0.0	3.3	chr1	213051371	213051400	(35905022)	+	(GGC)n	Simple_repeat	1	30	(0)	315638
13	16.8	10.6	0.0	chr1	213985817	213985863	(34970559)	+	(CTC)n	Simple_repeat	1	52	(0)	317035
16	21.7	0.0	0.0	chr1	214281540	214281571	(34674851)	+	G-rich	Low_complexity	1	32	(0)	317487
13	10.5	12.2	0.0	chr1	218345793	218345833	(30610589)	+	(GGAGCA)n	Simple_repeat	1	46	(0)	323091
34	7.5	0.0	0.0	chr1	218346051	218346093	(30610329)	+	(CA)n	Simple_repeat	1	43	(0)	323092
13	14.9	8.1	0.0	chr1	218346097	218346133	(30610289)	+	(TGC)n	Simple_repeat	1	40	(0)	323093
180	18.4	0.0	2.6	chr1	221169498	221169536	(27786886)	C	L2	LINE/L2	(2592)	827	790	327258
262	36.9	1.3	4.8	chr1	221169774	221169938	(27786484)	+	MIR1_Amn	SINE/MIR	1	159	(71)	327259
14	15.3	0.0	0.0	chr1	221741833	221741861	(27214561)	+	(TCTC)n	Simple_repeat	1	29	(0)	328099
32	10.8	0.0	0.0	chr1	221741862	221741911	(27214511)	+	(CA)n	Simple_repeat	1	50	(0)	328100
14	8.1	3.9	0.0	chr1	221742866	221742891	(27213531)	+	(CGCC)n	Simple_repeat	1	27	(0)	328101
1413	19.8	9.1	3.5	chr1	223030313	223030906	(25925516)	C	LTR8A	LTR/ERV1	(55)	672	1	330065
549	20.6	4.2	0.0	chr1	223030941	223031076	(25925346)	C	MER5B	DNA/hAT-Charlie	(36)	142	1	330068
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
891	19.8	1.6	4.6	chr1	224340799	224340831	(24615591)	C	L1M4	LINE/L1	(705)	6335	6303	332376
27	0.0	3.5	0.0	chr1	224340833	224340861	(24615561)	+	(CTTTTT)n	Simple_repeat	1	30	(0)	332378
308	18.4	0.0	0.0	chr1	224340862	224340910	(24615512)	C	AluYj4	SINE/Alu	(27)	284	236	332379
1490	17.7	16.1	0.8	chr1	224340899	224341297	(24615125)	C	MER52D	LTR/ERV1	(1615)	508	37	332380
565	18.7	1.9	1.7	chr1	224341298	224341428	(24614994)	C	L1M4	LINE/L1	(5473)	2406	2211	332376
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
17	12.7	0.0	0.0	chr1	225924502	225924527	(23031895)	+	(C)n	Simple_repeat	1	26	(0)	334819
12	18.3	9.6	3.8	chr1	226223763	226223835	(22732587)	+	(GCGCCCT)n	Simple_repeat	1	80	(0)	335480
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
2409	8.7	0.0	0.7	chr1	227356191	227356490	(21599932)	+	AluSx	SINE/Alu	1	298	(14)	337368
732	26.8	3.1	5.0	chr1	227356491	227356652	(21599770)	C	LTR16E2	LTR/ERVL	(34)	534	373	337367
276	24.6	1.4	1.4	chr1	227356926	227356995	(21599427)	C	LTR16E2	LTR/ERVL	(496)	72	3	337367
258	40.1	1.1	0.0	chr1	227357001	227357182	(21599240)	+	L4_C_Mam	LINE/RTE-X	1104	1287	(3851)	337369
13	12.0	7.9	2.4	chr1	227763400	227763437	(21192985)	+	(GCA)n	Simple_repeat	1	41	(0)	337866
22	22.4	4.3	5.2	chr1	227788900	227788991	(21167431)	+	(GT)n	Simple_repeat	1	96	(0)	337890
35	27.5	4.0	1.9	chr1	228378431	228378580	(20577842)	+	(CCCCT)n	Simple_repeat	1	156	(0)	338615
16	25.4	2.0	0.0	chr1	228446675	228446725	(20509697)	+	G-rich	Low_complexity	1	52	(0)	338725
34	0.0	0.0	0.0	chr1	228458656	228458684	(20497738)	+	(GT)n	Simple_repeat	1	29	(0)	338742
2252	9.1	0.0	0.3	chr1	228458853	228459160	(20497262)	C	AluSc	SINE/Alu	(2)	307	1	338743
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
2021	10.6	0.0	0.4	chr1	229173989	229174253	(19782169)	+	AluSq2	SINE/Alu	2	265	(48)	339797
1818	24.8	5.6	8.3	chr1	229190850	229191640	(19764782)	+	L1ME5	LINE/L1	5209	5978	(216)	339814
1561	17.9	1.6	4.7	chr1	229430487	229430805	(19525617)	+	AluJr	SINE/Alu	3	311	(1)	340254
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
2501	17.4	4.5	2.7	chr1	229696346	229696893	(19259529)	+	MER74A	LTR/ERVL	1	558	(0)	340742
16	20.3	0.0	2.4	chr1	230066975	230067016	(18889406)	+	(CCCCGC)n	Simple_repeat	1	42	(0)	341372
10050	17.2	4.6	2.3	chr1	230185322	230186131	(18770291)	C	L1MC1	LINE/L1	(5684)	824	2	341513
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
28	0.0	0.0	0.0	chr1	230753841	230753867	(18202555)	+	(CCTC)n	Simple_repeat	1	27	(0)	342358
13	22.4	1.7	6.7	chr1	231421470	231421528	(17534894)	+	(GCC)n	Simple_repeat	1	60	(0)	343470
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
2179	12.7	2.2	2.7	chr1	232252635	232253000	(16703422)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	344718
21	16.6	0.0	0.0	chr1	232805548	232805588	(16150834)	+	GA-rich	Low_complexity	1	41	(0)	345472
1116	25.1	5.6	3.2	chr1	234917496	234917841	(14038581)	C	MLT1A	LTR/ERVL-MaLR	(16)	358	4	348660
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
16	14.3	0.0	6.8	chr1	236281579	236281622	(12674800)	+	(GGCCC)n	Simple_repeat	1	44	(0)	351303
499	27.2	3.9	2.6	chr1	239061692	239061895	(9894527)	C	L1MEi	LINE/L1	(883)	1582	1233	355579
248	29.4	4.0	1.6	chr1	239062055	239062175	(9894247)	C	MLT1H	LTR/ERVL-MaLR	(396)	153	30	355580
295	31.6	4.1	4.1	chr1	239107538	239107659	(9848763)	+	MER5A	DNA/hAT-Charlie	1	122	(67)	355618
1151	11.7	28.2	0.0	chr1	239107678	239107891	(9848531)	C	AluSc	SINE/Alu	(10)	299	2	355619
196	27.6	2.6	7.3	chr1	239107927	239108008	(9848414)	C	L2c	LINE/L2	(0)	3387	3310	355620
257	36.3	2.6	0.0	chr1	243947530	243947642	(5008780)	C	L2c	LINE/L2	(5)	3382	3267	363357
315	25.9	4.9	0.8	chr1	244342125	244342241	(4614181)	C	MIRb	SINE/MIR	(126)	142	21	364008
12	17.6	2.4	4.7	chr1	244451566	244451607	(4504815)	+	(CCCGGCG)n	Simple_repeat	1	43	(0)	364208
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
3968	8.4	1.3	3.4	chr1	244815085	244815234	(4141188)	+	MER41A	LTR/ERV1	1	134	(420)	364844
2361	7.7	0.7	0.7	chr1	244815235	244815533	(4140889)	+	AluSx3	SINE/Alu	1	299	(12)	364845
3968	8.4	1.3	3.4	chr1	244815534	244815948	(4140474)	+	MER41A	LTR/ERV1	135	554	(0)	364844
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
17	18.9	4.2	0.0	chr1	245464846	245464893	(3491529)	+	(GAGCAGA)n	Simple_repeat	1	50	(0)	366092
15	16.7	2.4	2.3	chr1	246566454	246566495	(2389927)	+	(CCGCGAG)n	Simple_repeat	1	43	(0)	367694
1236	8.2	0.6	5.4	chr1	246696234	246696417	(2260005)	C	AluSx	SINE/Alu	(0)	312	138	367934
89	2.2	1.1	1.1	chr1	246696720	246696812	(2259610)	+	(GT)n	Simple_repeat	1	94	(0)	367935
3323	18.3	4.2	2.0	chr1	248826870	248827121	(129301)	C	MER67B	LTR/ERV1	(0)	661	401	370858
245	24.0	11.9	5.5	chr1	248837739	248837848	(118574)	+	MIRb	SINE/MIR	84	201	(67)	370879
12	25.6	0.0	0.0	chr1	248838551	248838587	(117835)	+	G-rich	Low_complexity	1	37	(0)	370880
12	6.3	8.1	5.0	chr1	248906545	248906581	(49841)	+	(GAGGCCG)n	Simple_repeat	1	40	(0)	370979
12	19.9	9.6	0.0	chr10	1048949	1049000	(132748422)	+	(CCAGCG)n	Simple_repeat	1	57	(0)	372219
2383	6.2	0.7	0.0	chr10	1055819	1056106	(132741316)	C	AluSg	SINE/Alu	(20)	290	1	372230
16	17.6	6.6	3.1	chr10	3067478	3067538	(130729884)	+	(GGCGCG)n	Simple_repeat	1	65	(0)	374579
93	27.7	0.4	1.2	chr10	3399443	3399686	(130397736)	+	(GT)n	Simple_repeat	1	245	(0)	375044
21	0.0	7.5	4.7	chr10	4826284	4826323	(128971099)	+	(GCG)n	Simple_repeat	1	43	(0)	376971
19	12.0	0.0	2.6	chr10	5813435	5813472	(127983950)	+	(GGGAG)n	Simple_repeat	1	38	(0)	378339
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
13	9.2	2.4	9.3	chr10	6163681	6163722	(127633700)	+	G-rich	Low_complexity	1	43	(0)	379017
12	12.0	3.7	0.0	chr10	6203364	6203390	(127594032)	+	(GCCGG)n	Simple_repeat	1	28	(0)	379103
30	14.4	5.6	1.3	chr10	7410927	7411024	(126386398)	+	(CTCG)n	Simple_repeat	1	102	(0)	380967
30	0.0	0.0	0.0	chr10	7411066	7411093	(126386329)	+	(T)n	Simple_repeat	1	28	(0)	380968
20	14.4	0.0	0.0	chr10	7411101	7411132	(126386290)	+	(TG)n	Simple_repeat	1	32	(0)	380969
373	29.7	7.1	14.6	chr10	13349618	13350063	(120447359)	C	L2	LINE/L2	(801)	2618	2209	390597
13	10.0	0.0	0.0	chr10	13882425	13882446	(119914976)	+	(GGA)n	Simple_repeat	1	22	(0)	391549
104	8.5	0.0	0.0	chr10	13884104	13884241	(119913181)	+	(AC)n	Simple_repeat	1	138	(0)	391552
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
77	25.2	3.3	6.1	chr10	15168719	15169113	(118628309)	+	(CGCCC)n	Simple_repeat	1	408	(0)	393755
1854	9.7	1.4	4.2	chr10	16437335	16437622	(117359800)	C	AluJo	SINE/Alu	(11)	301	22	395816
21652	11.0	1.6	2.3	chr10	20364454	20370845	(113426577)	C	L1PB1	LINE/L1	(0)	6867	463	401981
1416	27.5	6.8	6.7	chr10	21161824	21162528	(112634894)	+	MER21C	LTR/ERVL	128	833	(105)	403063
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
13	14.1	0.0	5.7	chr10	21526051	21526085	(112271337)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	403870
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
18	13.2	0.0	0.0	chr10	21526217	21526249	(112271173)	+	(GGGAG)n	Simple_repeat	1	33	(0)	403872
2760	5.7	13.0	0.8	chr10	21751374	21751765	(112045657)	C	LTR7	LTR/ERV1	(3)	447	1	404273
20	7.9	0.0	0.0	chr10	21751881	21751907	(112045515)	+	(G)n	Simple_repeat	1	27	(0)	404274
14	5.9	4.7	8.9	chr10	21752160	21752202	(112045220)	+	(CCTC)n	Simple_repeat	1	45	(0)	404275
187	27.8	5.3	3.2	chr10	21752464	21752556	(112044866)	C	MIRc	SINE/MIR	(106)	162	68	404276
17	18.8	0.0	0.0	chr10	23171706	23171736	(110625686)	+	(AC)n	Simple_repeat	1	31	(0)	406385
15	25.6	0.0	0.0	chr10	25175005	25175046	(108622376)	+	(AGC)n	Simple_repeat	1	42	(0)	409842
31	5.9	0.0	0.0	chr10	27243093	27243128	(106554294)	+	(CA)n	Simple_repeat	1	36	(0)	413148
237	32.6	6.2	0.0	chr10	27243132	27243266	(106554156)	+	Helitron3Na_Mam	RC/Helitron	12	155	(331)	413149
770	17.4	6.0	2.3	chr10	27740924	27741099	(106056323)	+	MER5A	DNA/hAT-Charlie	3	185	(4)	413916
13	18.5	7.0	0.0	chr10	27745612	27745654	(106051768)	+	G-rich	Low_complexity	1	46	(0)	413919
16	25.3	3.6	0.0	chr10	28533754	28533809	(105263613)	+	(GCGG)n	Simple_repeat	1	58	(0)	415309
1672	12.9	4.1	8.8	chr10	29159085	29159307	(104638115)	C	MER51B	LTR/ERV1	(0)	377	150	416409
2118	11.5	0.3	0.0	chr10	29159308	29159595	(104637827)	C	AluSx	SINE/Alu	(13)	299	11	416410
1672	12.9	4.1	8.8	chr10	29159596	29159702	(104637720)	C	MER51B	LTR/ERV1	(228)	149	63	416409
1824	17.6	6.2	7.7	chr10	31728674	31728892	(102068530)	+	MLT1D	LTR/ERVL-MaLR	198	394	(73)	420651
3721	12.5	3.5	0.0	chr10	31728854	31729438	(102067984)	+	LTR24C	LTR/ERV1	30	635	(0)	420654
22	17.9	6.2	1.4	chr10	31928527	31928591	(101868831)	+	(CCG)n	Simple_repeat	1	69	(0)	420990
23	9.7	0.0	0.0	chr10	32055519	32055551	(101741871)	+	(CA)n	Simple_repeat	1	33	(0)	421234
5638	10.6	16.7	3.3	chr10	34426793	34427856	(99369566)	+	MER11B	LTR/ERVK	1	1236	(0)	424703
781	14.6	5.2	0.0	chr10	35126142	35126251	(98671171)	C	AluJo	SINE/Alu	(195)	117	2	426036
330	24.2	0.0	4.5	chr10	35126344	35126434	(98670988)	+	MLT1E2	LTR/ERVL-MaLR	249	327	(300)	426037
847	13.1	1.6	1.6	chr10	35126436	35126557	(98670865)	+	AluSc	SINE/Alu	150	271	(38)	426038
37	27.4	3.7	4.1	chr10	35640753	35640941	(98156481)	+	(GCC)n	Simple_repeat	1	196	(0)	426868
27	16.4	5.6	4.3	chr10	35640872	35640960	(98156462)	+	(CGG)n	Simple_repeat	1	94	(0)	426869
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
2006	11.8	3.6	0.0	chr10	42637656	42637951	(91159471)	C	AluSp	SINE/Alu	(6)	307	1	432328
14	15.8	0.0	5.1	chr10	42880400	42880438	(90916984)	+	(TGCGTG)n	Simple_repeat	1	39	(0)	432686
234	24.3	2.8	0.0	chr10	42880721	42880790	(90916632)	+	L1MEh	LINE/L1	23	94	(2141)	432687
235	33.7	4.8	0.0	chr10	43026497	43026594	(90770828)	C	L2b	LINE/L2	(2)	3373	3271	432877
21	12.1	0.0	0.0	chr10	43077275	43077323	(90720099)	+	(GCT)n	Simple_repeat	1	49	(0)	432927
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
28	11.6	4.6	3.7	chr10	43409350	43409420	(90388002)	+	G-rich	Low_complexity	1	71	(0)	433437
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
1473	24.9	14.8	2.7	chr10	44865190	44865960	(88931462)	+	L1MEc	LINE/L1	48	927	(5473)	435328
290	35.4	6.2	7.0	chr10	44924957	44925169	(88872253)	C	MIRb	SINE/MIR	(7)	261	51	435421
37	0.0	2.6	0.0	chr10	45594600	45594637	(88202785)	+	(CCCAG)n	Simple_repeat	1	39	(0)	436271
14	8.1	0.0	6.7	chr10	45594704	45594733	(88202689)	+	(GGC)n	Simple_repeat	1	30	(0)	436272
218	24.8	0.6	0.2	chr10	46293101	46293615	(87503807)	+	(GT)n	Simple_repeat	1	518	(0)	437456
306	25.8	0.0	6.1	chr10	49762596	49762694	(84034728)	+	MIRb	SINE/MIR	130	222	(46)	442268
14	34.1	0.0	0.0	chr10	51074669	51074730	(82722692)	+	(GAGCTG)n	Simple_repeat	1	62	(0)	444311
377	39.8	9.9	0.6	chr10	52030056	52030495	(81766927)	+	L2b	LINE/L2	2833	3324	(51)	445741
260	33.5	14.2	2.4	chr10	52030573	52030777	(81766645)	+	Tigger15a	DNA/TcMar-Tigger	297	529	(186)	445742
7410	19.0	10.0	4.4	chr10	52964419	52966071	(80831351)	C	MER52A	LTR/ERV1	(0)	1755	1	446989
3499	5.6	0.0	1.3	chr10	53358813	53359266	(80438156)	C	LTR7	LTR/ERV1	(2)	448	1	447481
274	20.4	0.0	5.7	chr10	53359296	53359385	(80438037)	+	MLT1H2	LTR/ERVL-MaLR	412	560	(0)	447482
14	14.4	5.0	2.4	chr10	59362668	59362707	(74434715)	+	G-rich	Low_complexity	1	42	(0)	455458
17	3.6	0.0	6.2	chr10	62818491	62818522	(70978900)	+	(AAGA)n	Simple_repeat	1	32	(0)	460646
13	20.3	0.0	4.7	chr10	62818928	62818970	(70978452)	+	G-rich	Low_complexity	1	43	(0)	460647
15	25.2	4.8	1.5	chr10	63133249	63133311	(70664111)	+	(GGC)n	Simple_repeat	1	66	(0)	461239
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
2318	6.6	0.0	4.7	chr10	68527733	68527827	(65269595)	+	AluSx1	SINE/Alu	1	93	(219)	469456
2359	8.3	0.0	0.0	chr10	68527828	68528117	(65269305)	+	AluSx4	SINE/Alu	2	291	(19)	469457
2318	6.6	0.0	4.7	chr10	68528118	68528338	(65269084)	+	AluSx1	SINE/Alu	94	302	(10)	469456
363	23.9	5.1	7.1	chr10	68900517	68900647	(64896775)	+	MIR3	SINE/MIR	6	147	(121)	470388
182	32.9	0.0	2.3	chr10	69180669	69180755	(64616667)	+	L2c	LINE/L2	3244	3328	(59)	471052
305	34.6	7.4	4.0	chr10	69330262	69330484	(64466938)	C	MIRb	SINE/MIR	(1)	267	37	471380
1896	12.7	2.3	1.7	chr10	69450566	69450865	(64346557)	C	AluJb	SINE/Alu	(10)	302	1	471631
246	28.3	2.8	5.4	chr10	69452071	69452182	(64345240)	+	MIRc	SINE/MIR	32	140	(128)	471632
18	17.2	0.0	2.4	chr10	70404143	70404204	(63393218)	+	(GCT)n	Simple_repeat	1	60	(0)	473402
14	21.3	1.8	5.4	chr10	70404189	70404243	(63393179)	+	(CTGAGG)n	Simple_repeat	1	56	(0)	473403
22	15.4	0.0	0.0	chr10	70404220	70404300	(63393122)	+	(GCGGCG)n	Simple_repeat	1	81	(0)	473404
15	15.0	2.4	4.8	chr10	70404332	70404372	(63393050)	+	(GCC)n	Simple_repeat	1	42	(0)	473405
294	24.3	0.0	0.0	chr10	70442695	70442765	(63354657)	C	MIR	SINE/MIR	(9)	259	189	473462
1851	15.2	0.3	1.4	chr10	70442802	70443090	(63354332)	+	AluSx	SINE/Alu	1	286	(26)	473463
165	21.9	0.8	0.3	chr10	71432195	71432554	(62364868)	+	(TG)n	Simple_repeat	1	363	(0)	475265
229	35.3	3.3	4.1	chr10	71773830	71773950	(62023472)	+	L2c	LINE/L2	3268	3387	(0)	475880
44	0.0	0.0	0.0	chr10	71774052	71774089	(62023333)	+	(CA)n	Simple_repeat	1	38	(0)	475881
17	10.7	4.5	4.3	chr10	72260962	72261005	(61536417)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	476891
223	31.1	0.0	1.3	chr10	72355122	72355196	(61442226)	C	MIR3	SINE/MIR	(33)	175	102	477094
935	28.0	11.4	1.3	chr10	72355307	72355700	(61441722)	C	L2a	LINE/L2	(0)	3426	2988	477095
9736	17.6	0.7	1.1	chr10	74730024	74731437	(59065985)	+	MSTB-int	LTR/ERVL-MaLR	240	1645	(6)	481695
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
1554	25.3	5.2	1.3	chr10	76082588	76083035	(57714387)	+	L1ME5	LINE/L1	5384	5849	(345)	484026
1121	22.8	4.9	1.2	chr10	76083044	76083511	(57713911)	+	MER74A	LTR/ERVL	1	594	(28)	484027
2302	9.5	0.0	1.6	chr10	76083547	76083850	(57713572)	+	AluSx	SINE/Alu	1	299	(13)	484028
223	32.9	3.4	0.0	chr10	78965027	78965111	(54832311)	+	MIR3	SINE/MIR	99	186	(22)	488787
451	24.8	6.2	0.0	chr10	79129278	79129382	(54668040)	+	MER81	DNA/hAT-Blackjack	1	112	(2)	489110
17	16.4	0.0	0.0	chr10	79236340	79236373	(54561049)	+	(CAGG)n	Simple_repeat	1	34	(0)	489309
16	13.3	3.0	0.0	chr10	79236750	79236782	(54560640)	+	(CATT)n	Simple_repeat	1	34	(0)	489310
832	27.1	14.4	3.4	chr10	79236799	79237367	(54560055)	C	L2a	LINE/L2	(1)	3425	2798	489311
25	19.1	2.9	7.5	chr10	79243437	79243546	(54553876)	+	(GGAGCG)n	Simple_repeat	1	104	(0)	489324
15	8.5	0.0	0.0	chr10	80356364	80356388	(53441034)	+	(AGCC)n	Simple_repeat	1	25	(0)	491082
852	22.5	9.7	1.4	chr10	86522398	86522681	(47274741)	+	L1MC5a	LINE/L1	2466	2775	(2)	499655
276	28.0	0.8	6.3	chr10	86522660	86522785	(47274637)	+	HAL1	LINE/L1	2353	2471	(36)	499656
115	28.7	2.2	3.8	chr10	86653853	86654341	(47143081)	+	(AC)n	Simple_repeat	1	500	(0)	499923
59	0.0	0.0	0.0	chr10	86967151	86967200	(46830222)	+	(GT)n	Simple_repeat	1	50	(0)	500486
13	14.2	8.0	3.7	chr10	86971342	86971391	(46826031)	+	G-rich	Low_complexity	1	54	(0)	500489
403	28.4	4.5	0.7	chr10	87203523	87203671	(46593751)	+	LTR41B	LTR/ERVL	1	155	(603)	500923
13	0.0	0.0	0.0	chr10	87659908	87659924	(46137498)	+	(CGC)n	Simple_repeat	1	17	(0)	501621
186	23.7	0.0	0.0	chr10	89252186	89252223	(44545199)	+	MIRb	SINE/MIR	203	240	(28)	504103
16	12.8	2.8	2.7	chr10	89645039	89645074	(44152348)	+	(CTC)n	Simple_repeat	1	37	(0)	504723
791	27.0	1.5	0.0	chr10	90364050	90364245	(43433177)	+	Charlie1a	DNA/hAT-Charlie	1	199	(1256)	505736
583	28.6	5.5	9.0	chr10	90925440	90925850	(42871572)	C	LTR82B	LTR/ERVL	(291)	539	144	506533
545	28.2	0.6	1.1	chr10	90925909	90926087	(42871335)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	506535
301	26.5	12.6	0.8	chr10	93496848	93496980	(40300442)	C	MIRb	SINE/MIR	(24)	244	94	511238
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
22	29.4	1.3	0.0	chr10	94402731	94402759	(39394663)	+	(GGCGGA)n	Simple_repeat	1	73	(0)	512920
23	15.7	0.0	0.0	chr10	94402760	94402802	(39394620)	+	GA-rich	Low_complexity	1	43	(0)	512921
16	26.4	2.8	2.7	chr10	95291011	95291081	(38506341)	+	G-rich	Low_complexity	1	73	(0)	514030
15	25.1	2.8	4.1	chr10	96720434	96720504	(37076918)	+	G-rich	Low_complexity	1	73	(0)	516503
12	15.7	2.6	5.0	chr10	96720577	96720615	(37076807)	+	(GCCCGCG)n	Simple_repeat	1	40	(0)	516504
15	14.0	4.9	2.3	chr10	96720767	96720807	(37076615)	+	(GAGGTG)n	Simple_repeat	1	43	(0)	516505
12	18.1	3.1	0.0	chr10	96720925	96720956	(37076466)	+	GA-rich	Low_complexity	1	33	(0)	516506
415	33.3	6.6	4.7	chr10	96721089	96721324	(37076098)	C	MIRb	SINE/MIR	(2)	266	26	516507
24	0.0	2.8	5.4	chr10	97185997	97186032	(36611390)	+	(CA)n	Simple_repeat	1	37	(0)	517412
19	23.8	0.0	0.0	chr10	97318957	97319005	(36478417)	+	(GTGT)n	Simple_repeat	1	49	(0)	517718
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
574	29.0	10.9	0.0	chr10	97337091	97337311	(36460111)	+	MIRc	SINE/MIR	13	260	(8)	517748
293	33.3	2.8	0.0	chr10	97553977	97554081	(36243341)	+	MARNA	DNA/TcMar-Mariner	396	503	(83)	518212
2100	13.7	0.3	1.0	chr10	97554233	97554546	(36242876)	C	AluSx1	SINE/Alu	(0)	312	1	518213
25	23.3	2.8	5.5	chr10	97713845	97713950	(36083472)	+	(CGC)n	Simple_repeat	1	109	(0)	518571
12	20.1	7.5	1.8	chr10	99329299	99329351	(34468071)	+	(CTCCGG)n	Simple_repeat	1	57	(0)	521275
18	14.0	0.0	0.0	chr10	99329390	99329421	(34468001)	+	(GGC)n	Simple_repeat	1	32	(0)	521276
11	27.7	0.0	2.2	chr10	99329484	99329528	(34467894)	+	(CCCCGGC)n	Simple_repeat	1	45	(0)	521277
1982	13.1	2.4	0.7	chr10	100229875	100230165	(33567257)	C	AluJb	SINE/Alu	(15)	297	2	522981
12	18.8	4.3	4.2	chr10	100267768	100267813	(33529609)	+	GA-rich	Low_complexity	1	48	(0)	523048
386	23.3	11.9	4.3	chr10	100680702	100680840	(33116582)	+	MIRb	SINE/MIR	102	252	(16)	523795
13	14.2	3.2	0.0	chr10	101063280	101063310	(32734112)	+	G-rich	Low_complexity	1	32	(0)	524411
16	17.3	5.4	6.4	chr10	101217469	101217542	(32579880)	+	(CCGCTCC)n	Simple_repeat	1	78	(0)	524683
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
46	0.0	0.0	0.0	chr10	101776855	101776893	(32020529)	+	(CA)n	Simple_repeat	1	39	(0)	525662
12	25.7	2.1	2.0	chr10	101778798	101778845	(32018577)	+	(CTCC)n	Simple_repeat	1	49	(0)	525666
22	27.3	1.4	0.0	chr10	101778985	101779071	(32018351)	+	(CACA)n	Simple_repeat	1	88	(0)	525667
19	14.5	4.2	2.0	chr10	101818126	101818173	(31979249)	+	(CCTCTC)n	Simple_repeat	1	50	(0)	525732
641	27.3	13.0	0.9	chr10	101835761	101835982	(31961440)	C	MIR	SINE/MIR	(8)	254	2	525763
1735	11.5	13.5	0.0	chr10	101836266	101836535	(31960887)	C	AluSz6	SINE/Alu	(0)	312	1	525764
16	15.8	0.0	2.7	chr10	101840054	101840090	(31957332)	+	G-rich	Low_complexity	1	37	(0)	525772
17	17.7	6.6	3.1	chr10	102117635	102117695	(31679727)	+	(TCC)n	Simple_repeat	1	65	(0)	526326
22	25.9	4.3	0.0	chr10	102117843	102117911	(31679511)	+	(TG)n	Simple_repeat	1	72	(0)	526327
20	18.1	3.3	3.2	chr10	102120184	102120243	(31677179)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	526329
29	5.6	0.0	0.0	chr10	102120365	102120401	(31677021)	+	(GTGTGTGC)n	Simple_repeat	1	37	(0)	526330
16	24.3	2.7	5.2	chr10	102120412	102120486	(31676936)	+	(CGCTCC)n	Simple_repeat	1	77	(0)	526331
13	31.4	1.4	2.8	chr10	102120569	102120638	(31676784)	+	G-rich	Low_complexity	1	71	(0)	526332
33	8.9	0.0	2.0	chr10	102432858	102432908	(31364514)	+	(TC)n	Simple_repeat	1	51	(0)	526899
2556	7.1	0.0	0.0	chr10	102432914	102433224	(31364198)	C	AluSx3	SINE/Alu	(0)	311	1	526900
19	11.8	0.0	4.9	chr10	102433225	102433260	(31364162)	+	(CTTTT)n	Simple_repeat	5	39	(0)	526901
1156	16.7	3.9	7.5	chr10	102433272	102433511	(31363911)	C	AluJb	SINE/Alu	(1)	311	81	526902
19	4.3	0.0	0.0	chr10	102645212	102645235	(31152187)	+	(CA)n	Simple_repeat	1	24	(0)	527309
13	9.1	0.0	3.9	chr10	102918287	102918312	(30879110)	+	(CTCC)n	Simple_repeat	1	26	(0)	527858
26	14.1	8.6	0.0	chr10	102918607	102918676	(30878746)	+	(GCGGCT)n	Simple_repeat	1	76	(0)	527859
19	3.3	3.0	2.9	chr10	103277375	103277407	(30520015)	+	(CCTCGG)n	Simple_repeat	1	34	(0)	528586
12	25.1	4.3	0.0	chr10	103277411	103277457	(30519965)	+	(GCCGGCG)n	Simple_repeat	1	49	(0)	528587
36	0.0	0.0	0.0	chr10	103278904	103278934	(30518488)	+	(CA)n	Simple_repeat	1	31	(0)	528588
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
15	20.3	5.9	0.0	chr10	103368447	103368497	(30428925)	+	(CCTCGGCC)n	Simple_repeat	1	54	(0)	528834
17	17.2	2.6	0.0	chr10	103692728	103692772	(30104650)	+	(CCAC)n	Simple_repeat	1	46	(0)	529444
2366	9.4	0.0	0.0	chr10	103907847	103908144	(29889278)	+	AluSz	SINE/Alu	1	298	(14)	529878
13	21.2	9.8	3.0	chr10	104231968	104232059	(29565363)	+	G-rich	Low_complexity	1	101	(0)	530386
763	17.4	0.0	1.5	chr10	104232495	104232628	(29564794)	+	MER5A1	DNA/hAT-Charlie	1	132	(34)	530387
14	20.0	2.0	5.8	chr10	104639608	104639658	(29157764)	+	(CCT)n	Simple_repeat	1	52	(0)	531035
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
300	31.7	7.1	12.4	chr10	108597928	108598156	(25199266)	+	L2c	LINE/L2	2644	2860	(559)	536829
2805	14.0	7.6	0.4	chr10	108598249	108598736	(25198686)	+	LTR22B1	LTR/ERVK	1	526	(0)	536832
22431	12.1	0.9	2.4	chr10	109393185	109399322	(24398100)	+	L1PA8A	LINE/L1	3	6037	(279)	537925
282	21.8	0.0	0.0	chr10	109934877	109934931	(23862491)	C	MIR3	SINE/MIR	(3)	205	151	538628
12	30.0	1.3	5.2	chr10	110227530	110227605	(23569817)	+	GA-rich	Low_complexity	1	77	(0)	539142
535	24.6	2.8	0.2	chr10	111136892	111137068	(22660354)	C	MIR3	SINE/MIR	(57)	211	25	540656
646	27.4	6.6	7.0	chr10	112183054	112183321	(21614101)	+	MIRb	SINE/MIR	6	268	(0)	542244
732	24.5	4.0	2.1	chr10	113053734	113053975	(20743447)	C	MIR	SINE/MIR	(14)	248	2	543716
30	8.2	0.0	0.0	chr10	113165047	113165085	(20632337)	+	(AC)n	Simple_repeat	1	39	(0)	543847
38	20.4	0.0	1.2	chr10	114044946	114045031	(19752391)	+	(CCGCCC)n	Simple_repeat	1	86	(0)	545306
21	15.9	0.0	0.0	chr10	114173880	114173921	(19623501)	+	(CTCGCC)n	Simple_repeat	1	42	(0)	545512
670	23.6	9.2	3.7	chr10	115995786	115996053	(17801369)	+	Charlie15b	DNA/hAT-Charlie	684	967	(94)	548153
267	27.9	0.0	0.0	chr10	115996186	115996253	(17801169)	+	LTR104_Mam	LTR/Gypsy	116	183	(1326)	548154
488	22.0	2.9	0.0	chr10	115996395	115996494	(17800928)	+	MLT1B	LTR/ERVL-MaLR	1	103	(364)	548155
4092	9.7	1.3	0.4	chr10	115996579	115997127	(17800295)	C	MER41A	LTR/ERV1	(0)	554	1	548156
34	6.8	0.0	0.0	chr10	116273635	116273646	(17523776)	+	(CA)n	Simple_repeat	1	12	(0)	548528
52	2.1	0.0	0.0	chr10	116273647	116273695	(17523727)	+	(CT)n	Simple_repeat	1	49	(0)	548529
34	6.8	0.0	0.0	chr10	116273696	116273729	(17523693)	+	(CA)n	Simple_repeat	1	34	(0)	548530
17	7.0	0.0	5.9	chr10	116273912	116273945	(17523477)	+	(CACACT)n	Simple_repeat	1	34	(0)	548531
1240	24.5	3.0	4.4	chr10	117924584	117924925	(15872497)	+	LTR16E1	LTR/ERVL	194	530	(8)	551298
62	19.1	1.1	5.5	chr10	117924973	117925151	(15872271)	+	(CACACT)n	Simple_repeat	1	181	(0)	551299
14	27.9	1.7	1.7	chr10	118594980	118595037	(15202385)	+	(GCACCA)n	Simple_repeat	1	59	(0)	552301
16	24.1	1.8	3.5	chr10	119029967	119030023	(14767399)	+	(GCG)n	Simple_repeat	1	58	(0)	553071
16	23.3	0.0	0.0	chr10	119030023	119030062	(14767360)	+	(CTC)n	Simple_repeat	1	40	(0)	553072
21	12.1	0.0	0.0	chr10	119030110	119030145	(14767277)	+	(CGA)n	Simple_repeat	1	36	(0)	553073
479	24.1	5.0	0.8	chr10	119166075	119166208	(14631214)	C	MER45A	DNA/hAT-Tip100	(0)	178	39	553370
246	24.1	9.2	1.2	chr10	119317225	119317304	(14480118)	+	MER54A	LTR/ERVL	439	525	(376)	553680
43	0.0	0.0	0.0	chr10	119317348	119317384	(14480038)	+	(GT)n	Simple_repeat	1	37	(0)	553681
16	13.3	2.1	6.2	chr10	119651217	119651263	(14146159)	+	(CCGCGC)n	Simple_repeat	1	48	(0)	554324
1817	11.6	0.8	0.0	chr10	119686324	119686574	(14110848)	C	AluSz	SINE/Alu	(59)	253	1	554380
19	10.0	0.0	0.0	chr10	119818781	119818812	(13978610)	+	(GACG)n	Simple_repeat	1	32	(0)	554648
328	33.3	5.5	0.0	chr10	120131540	120131692	(13665730)	C	MLT1K	LTR/ERVL-MaLR	(15)	580	419	555183
12	22.3	8.8	0.0	chr10	121928210	121928266	(11869156)	+	G-rich	Low_complexity	1	62	(0)	557960
275	19.5	5.8	0.5	chr10	121928615	121928690	(11868732)	C	MIRc	SINE/MIR	(72)	158	81	557961
17	18.0	6.0	0.0	chr10	123135570	123135619	(10661803)	+	(GAGGCG)n	Simple_repeat	1	53	(0)	559848
15	28.0	3.3	0.0	chr10	123149021	123149080	(10648342)	+	(TCTC)n	Simple_repeat	1	62	(0)	559862
2384	6.0	0.4	0.0	chr10	123659216	123659496	(10137926)	C	AluSq2	SINE/Alu	(31)	282	1	560700
19	22.1	0.0	8.6	chr10	123666291	123666371	(10131051)	+	(GGC)n	Simple_repeat	1	81	(0)	560715
176	22.2	3.8	1.5	chr10	123972200	123972704	(9824718)	+	GA-rich	Low_complexity	1	524	(0)	561180
287	28.9	12.4	1.7	chr10	124152988	124153122	(9644300)	C	MIRb	SINE/MIR	(72)	196	46	561445
563	35.0	0.9	0.2	chr10	124153530	124155709	(9641713)	+	(CA)n	Simple_repeat	1	2199	(0)	561446
208	23.8	0.0	0.0	chr10	124449292	124449333	(9348089)	+	MIR1_Amn	SINE/MIR	123	164	(66)	561948
219	32.9	6.0	0.0	chr10	124449359	124449437	(9347985)	+	L2b	LINE/L2	3290	3373	(2)	561949
309	30.4	9.0	3.8	chr10	124469672	124469987	(9327435)	C	L2a	LINE/L2	(0)	3426	3028	561998
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
16	22.2	2.1	0.0	chr10	125151888	125151934	(8645488)	+	G-rich	Low_complexity	1	48	(0)	563042
310	26.6	2.7	2.7	chr10	125153180	125153291	(8644131)	C	L3	LINE/CR1	(354)	3745	3634	563043
180	24.1	4.4	6.5	chr10	125718957	125719049	(8078373)	+	MER5A	DNA/hAT-Charlie	34	124	(65)	563920
211	20.0	3.2	6.2	chr10	126904898	126904961	(6892461)	+	L2b	LINE/L2	3314	3375	(0)	565516
13	24.9	2.9	5.6	chr10	126905328	126905396	(6892026)	+	(CCGTC)n	Simple_repeat	1	71	(0)	565517
18	24.5	0.0	4.8	chr10	130136409	130136471	(3660951)	+	(GGC)n	Simple_repeat	1	63	(0)	569159
19	18.0	5.2	1.6	chr10	130136516	130136573	(3660849)	+	G-rich	Low_complexity	1	61	(0)	569160
78	25.5	1.0	0.0	chr10	131690314	131690508	(2106914)	+	(CA)n	Simple_repeat	1	197	(0)	570828
228	33.6	7.6	4.6	chr10	131885724	131885876	(1911546)	C	MIRc	SINE/MIR	(1)	267	110	571036
337	29.0	21.4	0.4	chr10	132294039	132294498	(1502924)	C	L2	LINE/L2	(993)	2426	1844	571487
203	31.9	18.8	0.4	chr10	132879060	132879289	(918133)	C	L2	LINE/L2	(1415)	2004	1723	572012
3671	15.7	2.5	1.3	chr10	132893662	132893895	(903527)	+	MER50	LTR/ERV1	472	711	(23)	572022
230	15.0	0.0	0.0	chr10	132894085	132894124	(903298)	+	MER50	LTR/ERV1	671	710	(24)	572022
5092	20.7	4.9	2.3	chr10	132894315	132895711	(901711)	+	L1M4	LINE/L1	2945	4380	(1766)	572024
26	30.1	2.7	0.9	chr10	132961861	132961971	(835451)	+	(GTGTGA)n	Simple_repeat	1	114	(0)	572082
2173	20.2	4.3	0.8	chr10	132962191	132962659	(834763)	+	MER66B	LTR/ERV1	1	486	(0)	572083
215	29.0	1.4	0.7	chr10	133121336	133121620	(675802)	+	(GT)n	Simple_repeat	1	289	(0)	572179
27	3.4	7.6	4.2	chr10	133121621	133121686	(675736)	+	(TGTGTGCA)n	Simple_repeat	1	71	(0)	572180
215	29.0	1.4	0.7	chr10	133121687	133122063	(675359)	+	(GT)n	Simple_repeat	2	379	(0)	572181
210	17.6	7.3	0.0	chr10	133319104	133319154	(478268)	+	MIR3	SINE/MIR	116	170	(38)	572373
24	33.2	2.6	1.7	chr10	133336651	133336764	(460658)	+	(CA)n	Simple_repeat	1	117	(0)	572401
13	3.7	10.7	0.0	chr10	133336882	133336909	(460513)	+	(GATGCG)n	Simple_repeat	1	31	(0)	572402
315	32.2	9.5	1.5	chr11	208146	208419	(134878203)	+	L2b	LINE/L2	3021	3315	(60)	573081
2260	8.4	0.3	0.3	chr11	449670	449956	(134636666)	+	AluSg	SINE/Alu	3	289	(21)	573405
19	26.1	2.1	5.2	chr11	506892	506986	(134579636)	+	(CGCCC)n	Simple_repeat	1	97	(0)	573470
2184	8.7	2.4	0.3	chr11	536488	536774	(134549848)	+	AluSz	SINE/Alu	1	293	(19)	573535
12	16.4	0.0	7.5	chr11	637192	637231	(134449391)	+	G-rich	Low_complexity	1	40	(0)	573670
12	16.1	0.0	7.5	chr11	725897	725936	(134360686)	+	(GCCCC)n	Simple_repeat	1	40	(0)	573834
17	31.7	1.3	1.3	chr11	725994	726069	(134360553)	+	G-rich	Low_complexity	1	77	(0)	573835
2336	7.1	0.0	0.0	chr11	743266	743574	(134343048)	C	AluY	SINE/Alu	(0)	311	1	573875
2346	10.2	0.3	1.6	chr11	743575	743709	(134342913)	C	AluSx	SINE/Alu	(176)	136	1	573874
1074	26.4	7.4	3.5	chr11	743710	743863	(134342759)	C	L1M5	LINE/L1	(617)	5562	5402	573873
756	13.1	19.3	0.0	chr11	743872	744047	(134342575)	+	MER30	DNA/hAT-Charlie	1	218	(12)	573876
2401	20.6	8.7	8.0	chr11	746428	746778	(134339844)	+	LTR8A	LTR/ERV1	380	727	(0)	573882
452	27.1	4.4	4.8	chr11	746779	746843	(134339779)	+	L1M5	LINE/L1	5228	5290	(856)	573881
17	23.6	0.0	5.0	chr11	1309629	1309688	(133776934)	+	(CCGCC)n	Simple_repeat	1	60	(0)	574452
1907	19.5	6.6	7.8	chr11	1310272	1310793	(133775829)	+	MER41C	LTR/ERV1	7	521	(0)	574453
95	39.6	0.6	3.4	chr11	1428722	1429387	(133657235)	+	(GT)n	Simple_repeat	1	670	(0)	574610
120	42.7	1.5	2.0	chr11	1745480	1746423	(133340199)	+	(AC)n	Simple_repeat	1	958	(0)	575040
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
24	34.1	1.5	4.5	chr11	2530763	2530894	(132555728)	+	(TG)n	Simple_repeat	1	134	(0)	575897
11	13.2	5.7	2.7	chr11	2700004	2700038	(132386584)	+	(CTGCCG)n	Simple_repeat	1	37	(0)	576063
224	30.6	6.9	3.6	chr11	2799941	2800052	(132286570)	C	MIR3	SINE/MIR	(62)	146	31	576154
11	11.1	6.9	0.0	chr11	2885145	2885173	(132201449)	+	(GACCGC)n	Simple_repeat	1	31	(0)	576273
19	11.2	5.8	3.6	chr11	2885520	2885571	(132201051)	+	GA-rich	Low_complexity	1	55	(0)	576274
33	5.7	0.0	0.0	chr11	2886850	2886886	(132199736)	+	(CA)n	Simple_repeat	1	37	(0)	576279
35	17.9	3.9	3.8	chr11	2892561	2892662	(132193960)	+	(CCT)n	Simple_repeat	1	106	(0)	576289
28	5.8	0.0	0.0	chr11	2929454	2929489	(132157133)	+	(GCCCC)n	Simple_repeat	1	36	(0)	576321
16	21.4	0.0	2.4	chr11	3797483	3797523	(131289099)	+	(CCG)n	Simple_repeat	1	41	(0)	577720
13	16.6	7.3	0.0	chr11	3797686	3797726	(131288896)	+	GA-rich	Low_complexity	1	44	(0)	577721
2390	8.9	0.0	0.3	chr11	3798325	3798626	(131287996)	C	AluSx1	SINE/Alu	(7)	305	5	577722
316	25.5	14.2	1.9	chr11	4095280	4095439	(130991183)	C	MIRb	SINE/MIR	(11)	257	75	578340
16	8.7	0.0	0.0	chr11	6481521	6481545	(128605077)	+	(AGC)n	Simple_repeat	1	25	(0)	581392
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
17	29.6	0.0	2.9	chr11	6611930	6611998	(128474624)	+	(CCCCG)n	Simple_repeat	1	69	(0)	581578
380	31.4	16.6	4.1	chr11	8169152	8169668	(126916954)	+	L2	LINE/L2	2483	3077	(342)	583593
516	28.9	6.3	2.0	chr11	8594702	8594945	(126491677)	+	L4_B_Mam	LINE/RTE-X	3583	3837	(1104)	584187
1968	10.8	2.0	1.7	chr11	8683685	8683981	(126402641)	C	AluSx	SINE/Alu	(14)	298	1	584339
307	32.9	2.1	7.7	chr11	10352247	10352401	(124734221)	+	L2b	LINE/L2	3230	3375	(0)	587423
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
16	19.1	0.0	0.0	chr11	11620983	11621012	(123465610)	+	(AC)n	Simple_repeat	1	30	(0)	589486
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
22	12.4	2.2	2.1	chr11	12377459	12377504	(122709118)	+	GA-rich	Low_complexity	1	47	(0)	590686
11	24.6	4.0	1.9	chr11	12377559	12377608	(122709014)	+	(AGCCGC)n	Simple_repeat	1	52	(0)	590687
34	14.2	0.0	0.0	chr11	12865082	12865136	(122221486)	+	(TG)n	Simple_repeat	1	55	(0)	591432
15	18.1	0.0	0.0	chr11	13009382	13009414	(122077208)	+	(CGCAGC)n	Simple_repeat	1	33	(0)	591659
11	25.0	5.6	4.0	chr11	13668410	13668481	(121418141)	+	(CTCCCG)n	Simple_repeat	1	76	(0)	592645
17	4.3	0.0	0.0	chr11	13668730	13668753	(121417869)	+	(GCG)n	Simple_repeat	1	24	(0)	592646
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
18	15.5	0.0	0.0	chr11	14905753	14905782	(120180840)	+	(GT)n	Simple_repeat	1	30	(0)	594661
17	20.7	3.4	3.3	chr11	14907931	14907989	(120178633)	+	(GGAGCA)n	Simple_repeat	1	61	(0)	594664
190	29.7	16.1	4.2	chr11	14908114	14908303	(120178319)	+	L3b	LINE/CR1	4928	5144	(88)	594665
16	21.4	0.0	5.6	chr11	16925889	16925942	(118160680)	+	G-rich	Low_complexity	1	54	(0)	597709
320	19.9	17.4	2.8	chr11	17013053	17013233	(118073389)	C	L2c	LINE/L2	(0)	3387	3163	597887
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
15	24.2	5.2	0.0	chr11	17736388	17736445	(117350177)	+	(ACGGCG)n	Simple_repeat	1	61	(0)	599231
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
13	13.7	0.0	0.0	chr11	18322761	18322785	(116763837)	+	(GCGG)n	Simple_repeat	1	25	(0)	600255
12	17.5	3.1	0.0	chr11	19241230	19241261	(115845361)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	601844
17	4.3	0.0	0.0	chr11	19241321	19241344	(115845278)	+	(GCC)n	Simple_repeat	1	24	(0)	601845
390	30.0	12.1	7.6	chr11	20000875	20001465	(115085157)	+	L2c	LINE/L2	2737	3382	(5)	603185
23460	9.9	1.5	1.1	chr11	20342379	20348768	(114737854)	+	L1PA8A	LINE/L1	2	6444	(2)	603768
19	13.4	4.9	0.0	chr11	20596784	20596825	(114489797)	+	(TCT)n	Simple_repeat	1	44	(0)	604201
3089	19.0	5.1	7.1	chr11	27347095	27347911	(107738711)	+	L1ME1	LINE/L1	5375	6179	(0)	613804
290	18.5	0.0	0.0	chr11	27348206	27348259	(107738363)	+	L2a	LINE/L2	3373	3426	(0)	613810
524	23.2	8.5	0.0	chr11	27507067	27507217	(107579405)	+	MIR3	SINE/MIR	36	200	(8)	614072
3716	3.6	0.2	0.2	chr11	27629072	27629519	(107457103)	C	LTR7	LTR/ERV1	(2)	448	1	614297
2537	8.8	4.3	1.3	chr11	27629520	27629899	(107456723)	C	HERVH-int	LTR/ERV1	(0)	7713	7322	614297
18	8.7	0.0	0.0	chr11	27697098	27697122	(107389500)	+	(TC)n	Simple_repeat	1	25	(0)	614368
26	15.5	0.0	0.0	chr11	27697123	27697164	(107389458)	+	(AC)n	Simple_repeat	1	42	(0)	614369
37	0.0	0.0	0.0	chr11	27697165	27697196	(107389426)	+	(AG)n	Simple_repeat	1	32	(0)	614370
14	18.7	2.2	4.3	chr11	27699173	27699218	(107387404)	+	(TCCCC)n	Simple_repeat	1	47	(0)	614372
2496	7.2	0.3	0.0	chr11	33015348	33015654	(102070968)	C	AluSx1	SINE/Alu	(4)	308	1	622658
12	9.7	0.0	0.0	chr11	35617736	35617757	(99468865)	+	(TGAA)n	Simple_repeat	1	22	(0)	627048
15	4.7	0.0	0.0	chr11	43358854	43358875	(91727747)	+	(CTC)n	Simple_repeat	1	22	(0)	638336
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
464	29.3	4.6	0.5	chr11	43881084	43881272	(91205350)	C	MIRb	SINE/MIR	(50)	218	22	639138
148	30.9	0.2	0.2	chr11	44978231	44978679	(90107943)	+	(GT)n	Simple_repeat	1	450	(0)	641238
445	26.0	12.3	0.7	chr11	45654906	45655056	(89431566)	+	MIRb	SINE/MIR	67	237	(31)	642534
672	24.3	15.5	0.5	chr11	45655061	45655263	(89431359)	+	MIR	SINE/MIR	23	261	(1)	642535
216	31.0	6.3	2.2	chr11	45923240	45923392	(89163230)	+	MIR3	SINE/MIR	35	195	(35)	643030
278	26.9	5.7	1.5	chr11	45923606	45923699	(89162923)	+	MIRc	SINE/MIR	89	193	(75)	643031
997	18.3	11.4	0.0	chr11	46238631	46238832	(88847790)	C	MIR	SINE/MIR	(1)	261	34	643569
491	27.7	2.2	5.3	chr11	46238837	46239023	(88847599)	C	MIR	SINE/MIR	(78)	184	4	643570
13	20.3	0.0	0.0	chr11	46278976	46279005	(88807617)	+	(TCCC)n	Simple_repeat	1	30	(0)	643665
190	17.9	0.0	2.5	chr11	46594367	46594406	(88492216)	+	MIRc	SINE/MIR	95	133	(135)	644245
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
17	22.2	0.0	0.0	chr11	47767169	47767210	(87319412)	+	(GTCCGG)n	Simple_repeat	1	42	(0)	646695
20	12.1	0.0	0.0	chr11	47767335	47767370	(87319252)	+	(GGGCGCT)n	Simple_repeat	1	36	(0)	646696
281	33.0	7.6	2.8	chr11	57205399	57205610	(77881012)	+	L2c	LINE/L2	3063	3285	(102)	653236
456	26.1	4.2	3.5	chr11	57205681	57205823	(77880799)	C	MIRc	SINE/MIR	(122)	146	3	653238
197	31.5	2.2	3.3	chr11	57475984	57476075	(77610547)	C	MIRb	SINE/MIR	(176)	92	2	653788
261	31.6	4.9	1.3	chr11	57568015	57568171	(77518451)	C	MamRep1879	DNA/hAT-Tip100?	(49)	167	5	654006
13	15.2	0.0	3.2	chr11	57598289	57598319	(77488303)	+	(CTG)n	Simple_repeat	1	31	(0)	654091
424	31.3	6.2	3.9	chr11	57598483	57598688	(77487934)	+	MIRc	SINE/MIR	18	228	(40)	654092
22	7.4	0.0	0.0	chr11	57598919	57598947	(77487675)	+	(GT)n	Simple_repeat	1	29	(0)	654093
33	0.0	3.1	0.0	chr11	57639225	57639256	(77447366)	+	(TG)n	Simple_repeat	1	33	(0)	654188
13	4.8	0.0	4.2	chr11	59172094	59172117	(75914505)	+	(GGGA)n	Simple_repeat	1	24	(0)	656440
12	17.6	4.0	5.8	chr11	59172219	59172268	(75914354)	+	(GCCGCCG)n	Simple_repeat	1	52	(0)	656441
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
661	1.4	0.0	0.0	chr11	59557497	59557569	(75529053)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656962
20	13.3	2.3	2.3	chr11	59557606	59557622	(75529000)	+	(TAA)n	Simple_repeat	1	18	(0)	656963
2303	7.3	0.0	1.1	chr11	59557623	59557909	(75528713)	+	AluSq2	SINE/Alu	3	286	(27)	656964
656	1.4	0.0	0.0	chr11	59560335	59560407	(75526215)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	656970
2337	8.6	0.0	1.0	chr11	59809996	59810308	(75276314)	C	AluSx1	SINE/Alu	(2)	310	1	657476
65	34.7	0.8	0.4	chr11	60747653	60747894	(74338728)	+	(CA)n	Simple_repeat	1	244	(0)	658786
13	21.9	2.3	2.2	chr11	60906383	60906426	(74180196)	+	(GGCGCCG)n	Simple_repeat	1	45	(0)	659081
11	27.6	0.0	0.0	chr11	61429967	61430005	(73656617)	+	(CCGCCCC)n	Simple_repeat	1	39	(0)	660145
15	7.8	0.0	3.5	chr11	61508644	61508672	(73577950)	+	(GCCCC)n	Simple_repeat	1	29	(0)	660333
17	21.5	1.7	5.0	chr11	61508759	61508817	(73577805)	+	(CGG)n	Simple_repeat	1	60	(0)	660334
14	21.1	0.0	2.5	chr11	61509724	61509763	(73576859)	+	(GCCCCG)n	Simple_repeat	1	40	(0)	660336
317	25.1	7.0	3.9	chr11	61567148	61567288	(73519334)	+	MIRc	SINE/MIR	44	198	(10)	660427
2144	14.1	8.4	2.9	chr11	61814447	61814862	(73271760)	C	LTR12B	LTR/ERV1	(226)	441	1	660878
16	6.5	2.8	5.4	chr11	61815161	61815196	(73271426)	+	(GGGGCC)n	Simple_repeat	1	37	(0)	660879
19	18.5	5.5	0.0	chr11	61955654	61955708	(73130914)	+	(CTGGCCC)n	Simple_repeat	1	58	(0)	661170
24	13.4	4.1	0.0	chr11	61967443	61967491	(73119131)	+	(GGC)n	Simple_repeat	1	51	(0)	661187
2330	8.4	0.3	0.3	chr11	62336902	62337198	(72749424)	C	AluSp	SINE/Alu	(16)	297	1	661866
17	10.5	6.5	0.0	chr11	62593154	62593184	(72493438)	+	(AC)n	Simple_repeat	1	33	(0)	662380
13	22.1	2.7	0.0	chr11	62646561	62646597	(72440025)	+	(CCG)n	Simple_repeat	1	38	(0)	662469
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	18.7	0.0	5.0	chr11	62855797	62855836	(72230786)	+	A-rich	Low_complexity	1	40	(0)	662962
2780	16.0	16.6	2.5	chr11	63531910	63532556	(71554066)	+	MER4CL34	LTR/ERV1	5	761	(4)	663825
2936	18.5	10.3	4.6	chr11	63532557	63533168	(71553454)	+	MER68-int	LTR/ERVL	686	1343	(1647)	663824
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
11	10.0	5.6	5.3	chr11	63681455	63681490	(71405132)	+	(CGCGCT)n	Simple_repeat	1	38	(0)	664163
23	14.9	2.2	0.0	chr11	63763731	63763775	(71322847)	+	(CGG)n	Simple_repeat	1	46	(0)	664333
27	23.1	3.4	2.2	chr11	63764004	63764092	(71322530)	+	(CTC)n	Simple_repeat	1	92	(0)	664334
380	29.6	14.5	3.3	chr11	63919998	63920210	(71166412)	+	L2b	LINE/L2	3135	3375	(0)	664649
20	8.0	0.0	0.0	chr11	64166792	64166818	(70919804)	+	(T)n	Simple_repeat	1	27	(0)	665098
2357	8.6	0.0	0.3	chr11	64166830	64167130	(70919492)	+	AluSg	SINE/Alu	1	300	(10)	665099
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
931	13.4	0.0	0.0	chr11	64270649	64270782	(70815840)	+	FRAM	SINE/Alu	1	134	(42)	665282
37	0.0	0.0	0.0	chr11	64270901	64270932	(70815690)	+	(AC)n	Simple_repeat	1	32	(0)	665283
44	0.0	0.0	0.0	chr11	64270976	64271013	(70815609)	+	(AC)n	Simple_repeat	1	38	(0)	665283
33	0.0	0.0	0.0	chr11	64271061	64271088	(70815534)	+	(AC)n	Simple_repeat	1	28	(0)	665283
48	0.0	0.0	0.0	chr11	64271208	64271248	(70815374)	+	(CA)n	Simple_repeat	1	41	(0)	665284
46	0.0	0.0	0.0	chr11	64271297	64271335	(70815287)	+	(CA)n	Simple_repeat	1	39	(0)	665284
29	0.0	0.0	0.0	chr11	64271382	64271406	(70815216)	+	(CA)n	Simple_repeat	1	25	(0)	665284
13	26.4	0.0	3.8	chr11	64360093	64360145	(70726477)	+	(CCCCCAC)n	Simple_repeat	1	53	(0)	665464
12	29.7	3.2	1.5	chr11	64713287	64713349	(70373273)	+	(CGCGCGT)n	Simple_repeat	1	65	(0)	666089
426	17.9	5.6	0.0	chr11	64744415	64744498	(70342124)	+	MIRc	SINE/MIR	64	152	(116)	666148
14	32.0	0.0	1.7	chr11	64844195	64844254	(70242368)	+	G-rich	Low_complexity	1	60	(0)	666322
283	30.5	1.4	2.8	chr11	64887576	64887720	(70198902)	+	L1ME3B	LINE/L1	5912	6054	(188)	666393
12	17.3	6.1	3.9	chr11	64887910	64887958	(70198664)	+	(GCCCAG)n	Simple_repeat	1	52	(0)	666394
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
204	32.1	5.8	5.8	chr11	65354350	65354435	(69732187)	C	MIRb	SINE/MIR	(59)	209	124	667384
274	24.0	5.0	0.0	chr11	65418923	65419018	(69667604)	C	L2a	LINE/L2	(262)	3164	3064	667508
901	25.3	14.0	9.7	chr11	65459204	65459497	(69627125)	C	MLT1F	LTR/ERVL-MaLR	(134)	414	99	667568
1893	19.3	6.3	6.3	chr11	65459498	65459871	(69626751)	+	MER74A	LTR/ERVL	1	374	(184)	667570
2364	9.5	0.3	0.0	chr11	65459872	65460175	(69626447)	+	AluSc8	SINE/Alu	7	311	(0)	667571
17	27.2	0.0	5.5	chr11	65539064	65539136	(69547486)	+	(GGC)n	Simple_repeat	1	73	(0)	667738
26	3.8	8.8	1.6	chr11	65810354	65810410	(69276212)	+	(CACATGCACA)n	Simple_repeat	1	62	(0)	668215
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
15	25.2	2.1	0.0	chr11	65899716	65899762	(69186860)	+	(GACG)n	Simple_repeat	1	48	(0)	668380
390	27.1	5.0	10.1	chr11	65918286	65918434	(69168188)	+	MIR	SINE/MIR	84	230	(0)	668430
442	25.5	4.6	3.0	chr11	65918398	65918573	(69168049)	C	MIRc	SINE/MIR	(20)	188	10	668431
15	13.9	0.0	0.0	chr11	66049201	66049224	(69037398)	+	(C)n	Simple_repeat	1	24	(0)	668728
13	32.8	2.3	3.4	chr11	66049235	66049272	(69037350)	+	GA-rich	Low_complexity	1	85	(0)	668729
19	15.2	4.4	0.0	chr11	66049273	66049317	(69037305)	+	G-rich	Low_complexity	1	47	(0)	668730
13	28.9	0.0	4.7	chr11	66257610	66257673	(68828949)	+	(CCGCCC)n	Simple_repeat	1	64	(0)	669135
13	14.8	0.0	3.1	chr11	66257792	66257823	(68828799)	+	G-rich	Low_complexity	1	32	(0)	669136
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
13	16.2	0.0	5.3	chr11	66371654	66371691	(68714931)	+	G-rich	Low_complexity	1	38	(0)	669343
11	28.4	0.0	0.0	chr11	66479958	66479996	(68606626)	+	(CAAGTCC)n	Simple_repeat	1	39	(0)	669605
281	30.2	3.6	3.6	chr11	66510821	66510930	(68575692)	C	MIRc	SINE/MIR	(129)	139	30	669682
13	22.7	0.0	0.0	chr11	66617063	66617098	(68469524)	+	G-rich	Low_complexity	1	36	(0)	669932
18	21.9	0.0	0.0	chr11	66843351	66843393	(68243229)	+	G-rich	Low_complexity	1	43	(0)	670370
353	21.1	2.6	1.3	chr11	66958999	66959075	(68127547)	+	MIRb	SINE/MIR	88	165	(103)	670575
236	29.8	8.8	0.9	chr11	67003060	67003164	(68083458)	+	MamGypLTR2c	LTR/Gypsy	680	793	(275)	670699
13	19.8	0.0	2.7	chr11	67023533	67023569	(68063053)	+	G-rich	Low_complexity	1	37	(0)	670751
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
13	13.1	0.0	0.0	chr11	68004128	68004153	(67082469)	+	(CCCCG)n	Simple_repeat	1	26	(0)	672598
18	27.1	0.0	0.0	chr11	68004175	68004217	(67082405)	+	(GT)n	Simple_repeat	1	43	(0)	672599
480	25.9	6.7	5.1	chr11	68004250	68004424	(67082198)	+	MIR	SINE/MIR	49	226	(36)	672600
278	31.0	7.9	1.5	chr11	68272433	68272563	(66814059)	C	MIRb	SINE/MIR	(8)	260	121	673103
132	20.5	2.4	0.3	chr11	68711163	68711459	(66375163)	+	(GT)n	Simple_repeat	1	304	(0)	673838
14	15.2	2.5	4.9	chr11	69049034	69049073	(66037549)	+	(GGC)n	Simple_repeat	1	41	(0)	674461
413	23.9	7.0	2.9	chr11	69049501	69049638	(66036984)	C	MIR	SINE/MIR	(98)	164	21	674462
13	22.1	2.3	2.2	chr11	69638351	69638394	(65448228)	+	(CCCCCAG)n	Simple_repeat	1	45	(0)	675425
19	15.4	0.0	4.3	chr11	69641016	69641062	(65445560)	+	(CCCCCT)n	Simple_repeat	1	47	(0)	675426
19	20.7	0.0	7.1	chr11	69704122	69704191	(65382431)	+	(GCCCCC)n	Simple_repeat	1	70	(0)	675534
292	29.7	17.1	0.5	chr11	70397291	70397500	(64689122)	+	L2c	LINE/L2	2577	2828	(591)	676802
439	28.7	0.0	1.0	chr11	70397525	70397626	(64688996)	+	SVA_A	Retroposon/SVA	215	315	(1072)	676803
786	13.6	0.0	0.0	chr11	70397536	70397645	(64688977)	C	AluJr	SINE/Alu	(202)	110	1	676804
367	32.7	8.4	6.4	chr11	70397654	70398136	(64688486)	+	L2c	LINE/L2	2821	3316	(71)	676802
411	33.9	7.6	1.2	chr11	70647456	70647628	(64438994)	+	MIR	SINE/MIR	60	244	(18)	677150
111	3.7	0.0	0.0	chr11	70658209	70658320	(64428302)	+	(AC)n	Simple_repeat	1	112	(0)	677167
17	23.4	0.0	6.0	chr11	72239933	72239999	(62846623)	+	(GGCCCG)n	Simple_repeat	1	67	(0)	679594
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
314	26.6	3.1	2.1	chr11	73983760	73983855	(61102767)	C	MIRc	SINE/MIR	(90)	178	82	683166
545	24.9	7.0	6.1	chr11	74493875	74494088	(60592534)	C	L2a	LINE/L2	(5)	3421	3206	684202
12	21.0	10.0	0.0	chr11	74988963	74989022	(60097600)	+	(GTCTCC)n	Simple_repeat	1	66	(0)	685136
443	33.5	4.7	3.2	chr11	75214901	75215088	(59871534)	+	MIR3	SINE/MIR	9	199	(9)	685560
398	23.2	2.9	0.0	chr11	75215102	75215200	(59871422)	C	MIRc	SINE/MIR	(149)	119	18	685561
21	0.0	2.4	9.3	chr11	75351980	75352021	(59734601)	+	(GTG)n	Simple_repeat	1	43	(0)	685857
28	5.6	12.5	0.0	chr11	75352022	75352027	(59734595)	+	(GT)n	Simple_repeat	31	63	(0)	685856
13	14.5	3.2	0.0	chr11	75352282	75352312	(59734310)	+	(CCACC)n	Simple_repeat	1	32	(0)	685858
206	37.4	8.7	0.0	chr11	75399208	75399354	(59687268)	+	MIR3	SINE/MIR	33	193	(15)	685980
15	15.8	4.5	2.2	chr11	75525673	75525716	(59560906)	+	(GCAGG)n	Simple_repeat	1	46	(0)	686263
251	27.8	5.3	4.9	chr11	75576345	75576496	(59510126)	+	L2b	LINE/L2	3018	3166	(209)	686377
12	17.5	3.1	0.0	chr11	75576747	75576778	(59509844)	+	(TCTTT)n	Simple_repeat	1	33	(0)	686378
17	4.0	3.9	0.0	chr11	76235088	76235113	(58851509)	+	(ATG)n	Simple_repeat	1	27	(0)	687579
16	22.6	4.2	4.0	chr11	76235170	76235241	(58851381)	+	(CCCAGCT)n	Simple_repeat	1	75	(0)	687580
21	15.5	0.0	0.0	chr11	76782958	76782993	(58303629)	+	(CA)n	Simple_repeat	1	36	(0)	688673
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
11	14.1	10.3	0.0	chr11	76783236	76783274	(58303348)	+	(CGCCCGG)n	Simple_repeat	1	43	(0)	688675
16	17.7	1.7	6.8	chr11	76860858	76860921	(58225701)	+	(GGCCG)n	Simple_repeat	1	60	(0)	688820
16	13.1	0.0	5.4	chr11	76860956	76860992	(58225630)	+	(GGC)n	Simple_repeat	1	37	(0)	688821
16	10.7	4.5	4.3	chr11	77046244	77046287	(58040335)	+	(GCACCCCC)n	Simple_repeat	1	46	(0)	689154
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
12	18.1	4.2	1.3	chr11	77820097	77820135	(57266487)	+	GA-rich	Low_complexity	1	40	(0)	690658
14	15.0	5.4	0.0	chr11	78023094	78023130	(57063492)	+	G-rich	Low_complexity	1	39	(0)	691140
1072	13.4	1.8	0.6	chr11	78023503	78023666	(57062956)	C	AluJb	SINE/Alu	(0)	312	147	691141
480	27.5	1.9	3.6	chr11	78861264	78861451	(56225171)	C	MIR3	SINE/MIR	(15)	215	20	692780
30	3.4	0.0	0.0	chr11	79440853	79440882	(55645740)	+	(GT)n	Simple_repeat	1	30	(0)	693943
15	12.2	0.0	0.0	chr11	79440908	79440934	(55645688)	+	(CCTG)n	Simple_repeat	1	27	(0)	693944
15	16.6	0.0	0.0	chr11	79440964	79440990	(55645632)	+	GA-rich	Low_complexity	1	27	(0)	693945
19	11.6	0.0	0.0	chr11	79440990	79441018	(55645604)	+	(AC)n	Simple_repeat	1	29	(0)	693946
13	22.3	1.6	7.9	chr11	79441182	79441243	(55645379)	+	(TCC)n	Simple_repeat	1	63	(0)	693947
309	24.8	13.1	3.4	chr11	79472840	79472956	(55613666)	+	MIRb	SINE/MIR	8	137	(131)	694018
543	27.2	3.2	7.2	chr11	82900866	82901127	(52185495)	C	MIRb	SINE/MIR	(3)	265	15	699672
27	2.4	4.5	2.2	chr11	84720661	84720705	(50365917)	+	(AAAATA)n	Simple_repeat	1	46	(0)	702821
346	35.4	9.5	4.8	chr11	85628901	85629232	(49457390)	+	L2c	LINE/L2	3020	3368	(19)	704115
369	25.9	2.8	0.6	chr11	85810838	85810962	(49275660)	C	MIR3	SINE/MIR	(49)	159	42	704417
24	24.2	1.9	5.7	chr11	85811241	85811343	(49275279)	+	(CGCCC)n	Simple_repeat	1	105	(0)	704418
208	28.8	18.9	0.5	chr11	88175642	88175840	(46910782)	C	MIRc	SINE/MIR	(19)	249	6	708174
11455	15.3	1.2	1.5	chr11	90772712	90775439	(44311183)	C	L1PA10	LINE/L1	(3544)	2917	180	711882
2424	19.2	1.5	1.1	chr11	90775445	90775897	(44310725)	C	LTR2	LTR/ERV1	(0)	463	9	711883
13	8.1	3.9	0.0	chr11	92226891	92226916	(42859706)	+	(CCTCT)n	Simple_repeat	1	27	(0)	713866
41	0.0	0.0	0.0	chr11	92309385	92309419	(42777203)	+	(CA)n	Simple_repeat	1	35	(0)	713968
24	20.3	2.0	0.0	chr11	93197514	93197564	(41889058)	+	(CA)n	Simple_repeat	1	52	(0)	715243
16	17.0	0.0	0.0	chr11	93197794	93197826	(41888796)	+	(CGC)n	Simple_repeat	1	33	(0)	715244
2087	8.2	0.0	12.9	chr11	93661104	93661445	(41425177)	C	AluJb	SINE/Alu	(14)	298	1	715957
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
2465	11.7	0.0	0.0	chr11	94649594	94649902	(40436720)	+	AluSx1	SINE/Alu	1	309	(3)	717467
455	13.5	8.6	26.0	chr11	94650011	94650210	(40436412)	+	MER51B	LTR/ERV1	1	162	(215)	717468
1713	16.2	4.2	1.0	chr11	94650208	94650507	(40436115)	+	MER51B	LTR/ERV1	68	377	(0)	717469
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
15	31.9	3.6	1.2	chr11	100687100	100687182	(34399440)	+	(GCGG)n	Simple_repeat	1	86	(0)	725359
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
40	4.9	0.0	0.0	chr11	102317589	102317631	(32768991)	+	(GT)n	Simple_repeat	1	43	(0)	727750
270	30.2	8.6	2.8	chr11	103108968	103109185	(31977437)	C	MIRb	SINE/MIR	(8)	260	29	729011
14	17.9	0.0	4.8	chr11	103109529	103109570	(31977052)	+	(CTTCCCC)n	Simple_repeat	1	42	(0)	729012
22443	15.0	2.8	2.8	chr11	106955272	106957741	(28128881)	C	L1PA8A	LINE/L1	(3985)	2498	1	734230
192	31.4	0.0	0.0	chr11	108008683	108008733	(27077889)	C	L2c	LINE/L2	(7)	3380	3330	736036
13	15.8	0.0	7.3	chr11	110093511	110093551	(24993071)	+	G-rich	Low_complexity	1	41	(0)	739266
13	27.9	2.9	2.9	chr11	110429986	110430053	(24656569)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	739820
11	16.5	7.8	3.6	chr11	111299729	111299779	(23786843)	+	(GGAGCGA)n	Simple_repeat	1	55	(0)	741167
173	25.5	0.2	1.9	chr11	111358279	111358330	(23728292)	+	(CA)n	Simple_repeat	1	52	(0)	741246
33	2.4	4.7	0.0	chr11	111358331	111358373	(23728249)	+	(CACACTCT)n	Simple_repeat	1	45	(0)	741247
173	25.5	0.2	1.9	chr11	111358374	111358787	(23727835)	+	(CA)n	Simple_repeat	1	406	(0)	741248
13	22.6	0.0	0.0	chr11	111358886	111358921	(23727701)	+	G-rich	Low_complexity	1	36	(0)	741249
13	0.0	0.0	0.0	chr11	111977581	111977597	(23109025)	+	(CGC)n	Simple_repeat	1	17	(0)	742322
421	24.8	0.8	8.3	chr11	114036016	114036160	(21050462)	C	MER5B	DNA/hAT-Charlie	(39)	139	6	745642
17	23.7	0.0	3.7	chr11	115504293	115504358	(19582264)	+	(CAGCCG)n	Simple_repeat	1	63	(0)	747726
291	33.7	2.8	10.9	chr11	117316474	117316752	(17769870)	C	L2b	LINE/L2	(26)	3349	3062	750939
50	0.0	0.0	0.0	chr11	117512644	117512686	(17573936)	+	(AC)n	Simple_repeat	1	43	(0)	751265
203	27.8	8.9	0.0	chr11	117512689	117512760	(17573862)	C	L2c	LINE/L2	(38)	3349	3266	751266
48	0.0	0.0	0.0	chr11	117512762	117512802	(17573820)	+	(CA)n	Simple_repeat	1	41	(0)	751267
2021	12.7	0.0	2.3	chr11	117597447	117597754	(17488868)	C	AluSz	SINE/Alu	(10)	302	2	751416
740	4.7	7.8	0.0	chr11	117810114	117810219	(17276403)	+	HERVH-int	LTR/ERV1	203	317	(7396)	751807
12	20.1	0.0	2.8	chr11	118146294	118146329	(16940293)	+	(CCCCAC)n	Simple_repeat	1	36	(0)	752403
215	25.0	10.6	0.0	chr11	118146449	118146532	(16940090)	C	L3b	LINE/CR1	(184)	5048	4955	752404
16	13.2	0.0	0.0	chr11	118531457	118531481	(16555141)	+	(GT)n	Simple_repeat	1	25	(0)	753064
12	15.8	0.0	3.3	chr11	118609723	118609752	(16476870)	+	G-rich	Low_complexity	1	30	(0)	753236
19	25.5	3.5	3.4	chr11	118611289	118611373	(16475249)	+	(TCTCT)n	Simple_repeat	1	88	(0)	753237
19	18.9	7.7	4.1	chr11	118621251	118621341	(16465281)	+	(TCCTC)n	Simple_repeat	1	98	(0)	753251
13	7.0	6.2	2.9	chr11	118634880	118634911	(16451711)	+	(CTCGCC)n	Simple_repeat	1	34	(0)	753264
13	18.5	2.6	2.5	chr11	118635059	118635097	(16451525)	+	(CCCCCGG)n	Simple_repeat	1	40	(0)	753265
1837	8.6	9.6	1.0	chr11	118714889	118715183	(16371439)	C	MER4B	LTR/ERV1	(287)	323	1	753424
1468	13.6	3.9	0.0	chr11	118715439	118715659	(16370963)	C	MER30	DNA/hAT-Charlie	(0)	230	1	753427
221	35.3	4.3	4.7	chr11	118997661	118997871	(16088751)	+	MIR	SINE/MIR	42	251	(11)	754056
21	31.8	3.5	1.7	chr11	119094730	119094845	(15991777)	+	G-rich	Low_complexity	1	120	(0)	754243
493	25.6	1.8	3.7	chr11	119168503	119168673	(15917949)	+	MIRc	SINE/MIR	9	186	(82)	754376
13	17.4	4.9	2.3	chr11	119168735	119168775	(15917847)	+	G-rich	Low_complexity	1	43	(0)	754377
245	31.3	8.8	4.6	chr11	119742481	119742654	(15343968)	+	Tigger19a	DNA/TcMar-Tigger	25	206	(117)	755380
202	29.1	12.7	0.0	chr11	120236895	120237004	(14849618)	+	MIR3	SINE/MIR	59	184	(24)	756196
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
513	31.1	9.2	1.6	chr11	120646194	120646440	(14440182)	C	MIRb	SINE/MIR	(1)	267	2	756920
360	33.2	4.8	9.7	chr11	120682394	120682653	(14403969)	+	L2b	LINE/L2	2892	3136	(239)	756980
12	22.8	5.7	1.8	chr11	121723233	121723285	(13363337)	+	(TCCCTC)n	Simple_repeat	1	56	(0)	758530
199	35.6	0.0	4.0	chr11	122327653	122327728	(12758894)	C	L2b	LINE/L2	(3)	3372	3300	759442
212	32.4	4.5	4.5	chr11	122327811	122327920	(12758702)	C	MIRc	SINE/MIR	(31)	237	128	759443
3733	15.0	6.3	7.0	chr11	122559693	122559946	(12526676)	+	L1MA6	LINE/L1	7200	7454	(265)	759733
651	2.7	0.0	0.0	chr11	122559947	122560019	(12526603)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	759749
619	14.4	0.0	3.9	chr11	122560038	122560141	(12526481)	+	AluSq2	SINE/Alu	206	305	(8)	759750
674	14.8	0.0	0.0	chr11	122560147	122560247	(12526375)	+	AluSq2	SINE/Alu	208	308	(5)	759751
275	30.3	2.7	2.0	chr11	123196624	123196755	(11889867)	C	MIR3	SINE/MIR	(57)	151	26	761049
231	33.3	3.6	0.0	chr11	123196784	123196864	(11889758)	C	L2c	LINE/L2	(2)	3424	3341	761050
222	33.2	7.8	2.4	chr11	123493842	123494081	(11592541)	+	L2a	LINE/L2	3071	3322	(104)	761675
31	20.8	0.0	0.0	chr11	123741468	123741535	(11345087)	+	(CCCGG)n	Simple_repeat	1	68	(0)	762084
25	26.6	2.0	3.0	chr11	123741912	123742010	(11344612)	+	(TTTTCT)n	Simple_repeat	1	101	(0)	762085
1683	8.3	5.2	0.8	chr11	123742510	123742768	(11343854)	C	MER4A1	LTR/ERV1	(226)	246	1	762087
34	5.5	0.0	0.0	chr11	125401762	125401799	(9684823)	+	(TG)n	Simple_repeat	1	38	(0)	764445
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
241	26.1	1.1	6.1	chr11	126416342	126416439	(8670183)	+	MIR3	SINE/MIR	15	107	(101)	766060
211	25.5	3.5	1.8	chr11	126416476	126416531	(8670091)	C	MER5A	DNA/hAT-Charlie	(19)	170	114	766061
229	24.1	3.3	0.0	chr11	128718191	128718248	(6368374)	C	MIRc	SINE/MIR	(61)	207	148	769289
457	25.4	7.8	1.5	chr11	128718272	128718403	(6368219)	+	MIR3	SINE/MIR	46	186	(22)	769290
41	0.0	0.0	0.0	chr11	130719975	130720009	(4366613)	+	(CA)n	Simple_repeat	1	35	(0)	772326
16	22.6	3.1	6.1	chr11	130720119	130720182	(4366440)	+	(CA)n	Simple_repeat	1	66	(0)	772327
36	0.0	0.0	0.0	chr11	130720246	130720276	(4366346)	+	(CA)n	Simple_repeat	1	31	(0)	772327
22	3.9	0.0	0.0	chr11	130720314	130720340	(4366282)	+	(CA)n	Simple_repeat	1	27	(0)	772327
40	0.0	0.0	0.0	chr11	131234461	131234494	(3852128)	+	(TG)n	Simple_repeat	1	34	(0)	773013
15	16.9	0.0	0.0	chr11	131234496	131234522	(3852100)	+	(GC)n	Simple_repeat	1	27	(0)	773014
23	3.5	3.3	0.0	chr11	132406098	132406127	(2680495)	+	(TG)n	Simple_repeat	1	31	(0)	774570
18	0.0	0.0	0.0	chr11	133064017	133064039	(2022583)	+	(TTTC)n	Simple_repeat	1	23	(0)	775430
34	8.0	1.8	1.8	chr11	133083111	133083165	(2003457)	+	(CA)n	Simple_repeat	1	56	(0)	775453
15	19.6	0.0	0.0	chr11	133532083	133532111	(1554511)	+	(GT)n	Simple_repeat	1	29	(0)	776049
13	19.7	4.6	5.9	chr11	133532146	133532210	(1554412)	+	(TCTCC)n	Simple_repeat	1	68	(0)	776050
21	17.9	6.8	2.6	chr11	133532331	133532403	(1554219)	+	(GCT)n	Simple_repeat	1	78	(0)	776051
20	14.0	2.4	2.4	chr11	133532437	133532477	(1554145)	+	GA-rich	Low_complexity	1	42	(0)	776052
300	20.5	14.6	7.4	chr11	133787629	133787723	(1298899)	C	MER5B	DNA/hAT-Charlie	(4)	174	72	776381
316	30.3	0.9	4.4	chr11	133968641	133968754	(1117868)	+	MIRb	SINE/MIR	141	250	(18)	776579
1829	13.9	8.3	0.3	chr11	135033032	135033342	(53280)	C	MER1B	DNA/hAT-Charlie	(0)	339	2	777962
426	30.5	5.7	4.8	chr11	135033343	135033371	(53251)	+	MIR	SINE/MIR	203	228	(34)	777961
621	28.2	11.1	1.4	chr11	135033441	135033652	(52970)	+	MIRb	SINE/MIR	26	260	(8)	777963
18	3.2	2.8	5.4	chr12	570670	570705	(132704604)	+	(GCCCTG)n	Simple_repeat	1	37	(0)	778981
855	21.4	1.1	0.0	chr12	576484	576656	(132698653)	C	AluJo	SINE/Alu	(1)	311	137	778993
3005	21.4	4.5	3.1	chr12	694475	695188	(132580121)	C	LTR49-int	LTR/ERV1	(3674)	2657	1979	779261
1961	23.4	6.2	6.1	chr12	695386	696404	(132578905)	C	LTR49-int	LTR/ERV1	(4410)	2508	556	779261
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
45	25.6	3.8	4.5	chr12	991143	991354	(132283955)	+	(CGG)n	Simple_repeat	1	220	(0)	779868
29	0.0	0.0	0.0	chr12	1594157	1594183	(131681126)	+	(GCC)n	Simple_repeat	1	27	(0)	780919
224	23.2	1.6	0.9	chr12	1604758	1605303	(131670006)	+	(GT)n	Simple_repeat	1	555	(0)	780942
22	24.3	1.9	0.0	chr12	1628910	1628961	(131646348)	+	(GT)n	Simple_repeat	1	53	(0)	780983
274	30.8	7.0	5.7	chr12	2192143	2192369	(131082940)	C	LTR85a	LTR/Gypsy?	(317)	385	156	781837
20	21.7	4.3	5.1	chr12	2959652	2959745	(130315564)	+	(TCGCTCC)n	Simple_repeat	1	98	(0)	783022
17	3.4	6.7	0.0	chr12	2959797	2959826	(130315483)	+	(CTCCG)n	Simple_repeat	1	32	(0)	783023
331	33.8	4.4	3.5	chr12	2998624	2998825	(130276484)	C	MIRc	SINE/MIR	(56)	212	3	783110
15	10.8	3.3	0.0	chr12	4031250	4031279	(129244030)	+	(CCGC)n	Simple_repeat	1	31	(0)	784812
12	29.7	0.0	2.1	chr12	4031354	4031401	(129243908)	+	(GCGCT)n	Simple_repeat	1	48	(0)	784813
12	15.7	6.5	4.1	chr12	4031390	4031435	(129243874)	+	(GCGCC)n	Simple_repeat	1	49	(0)	784814
11	21.5	6.0	1.9	chr12	4272316	4272365	(129002944)	+	(GCCCGC)n	Simple_repeat	1	53	(0)	785270
17	0.0	0.0	0.0	chr12	4605186	4605206	(128670103)	+	(TTG)n	Simple_repeat	1	21	(0)	785779
1203	22.9	4.9	2.0	chr12	4605209	4605564	(128669745)	C	Charlie2b	DNA/hAT-Charlie	(28)	2754	2388	785780
12	23.9	1.6	6.5	chr12	5044060	5044120	(128231189)	+	(GGAGCCG)n	Simple_repeat	1	62	(0)	786464
166	28.6	0.2	0.2	chr12	5796126	5796581	(127478728)	+	(CA)n	Simple_repeat	1	457	(0)	787541
20	9.2	3.7	7.1	chr12	6205598	6205651	(127069658)	+	(TGTT)n	Simple_repeat	1	56	(0)	788237
590	21.6	9.0	2.3	chr12	6215363	6215537	(127059772)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	788253
2130	7.6	4.0	0.0	chr12	6568652	6568942	(126706367)	+	AluSq	SINE/Alu	1	303	(10)	788954
2110	7.1	3.3	1.7	chr12	6568946	6569239	(126706070)	+	AluSc	SINE/Alu	2	300	(9)	788955
15	22.0	2.0	3.9	chr12	6766353	6766403	(126508906)	+	(CGG)n	Simple_repeat	1	52	(0)	789350
17	24.3	1.9	0.0	chr12	6778866	6778910	(126496399)	+	(CGCGCA)n	Simple_repeat	1	45	(0)	789365
31	3.3	0.0	0.0	chr12	6778911	6778941	(126496368)	+	(CA)n	Simple_repeat	1	31	(0)	789366
17	24.3	1.9	0.0	chr12	6778942	6778953	(126496356)	+	(CGCGCA)n	Simple_repeat	5	17	(0)	789367
192	29.1	0.4	0.6	chr12	6817645	6818185	(126457124)	+	(CA)n	Simple_repeat	1	543	(0)	789468
21	12.9	4.5	2.2	chr12	6829271	6829314	(126445995)	+	(GT)n	Simple_repeat	1	46	(0)	789483
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
14	22.2	2.3	2.2	chr12	7440325	7440368	(125834941)	+	(GCC)n	Simple_repeat	1	45	(0)	790385
2644	4.9	0.0	0.3	chr12	7960400	7960705	(125314604)	+	AluY	SINE/Alu	1	305	(6)	791487
19	15.3	0.0	6.1	chr12	8033623	8033671	(125241638)	+	(CCT)n	Simple_repeat	1	49	(0)	791669
2306	10.1	5.6	1.3	chr12	8809797	8810169	(124465140)	+	HERVH-int	LTR/ERV1	7324	7713	(0)	792924
2895	7.1	9.2	0.0	chr12	8810170	8810576	(124464733)	+	LTR7	LTR/ERV1	1	448	(2)	792924
259	28.1	4.7	0.0	chr12	8819289	8819370	(124455939)	C	L1M5	LINE/L1	(292)	5832	5747	792945
339	24.6	10.4	8.6	chr12	8819433	8819583	(124455726)	+	MLT1K	LTR/ERVL-MaLR	72	225	(370)	792946
9218	19.6	7.0	3.5	chr12	10152997	10154367	(123120942)	C	L1PA16	LINE/L1	(4897)	2038	582	794805
2245	7.3	3.0	0.0	chr12	10211957	10212242	(123063067)	C	AluSp	SINE/Alu	(17)	296	2	794931
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
132	23.1	0.7	0.7	chr12	11540698	11541003	(121734306)	+	(GT)n	Simple_repeat	1	308	(0)	796617
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
15	24.0	3.2	3.1	chr12	12612098	12612159	(120663150)	+	G-rich	Low_complexity	1	64	(0)	798444
194	32.1	4.7	0.0	chr12	12786644	12786724	(120488585)	C	MIRc	SINE/MIR	(87)	181	97	798776
26	19.7	1.7	0.0	chr12	13980607	13980665	(119294644)	+	GA-rich	Low_complexity	1	60	(0)	800593
18	14.0	4.9	2.3	chr12	13980672	13980712	(119294597)	+	(CA)n	Simple_repeat	1	43	(0)	800594
19	33.2	3.1	2.0	chr12	13980895	13980992	(119294317)	+	(CG)n	Simple_repeat	1	101	(0)	800595
24	25.9	3.3	2.1	chr12	14365688	14365778	(118909531)	+	(GCG)n	Simple_repeat	1	94	(0)	801269
22	23.2	0.0	0.0	chr12	14567613	14567664	(118707645)	+	(CAG)n	Simple_repeat	1	52	(0)	801565
17	29.6	1.7	0.0	chr12	22335307	22335335	(110939974)	+	(CG)n	Simple_repeat	1	30	(0)	811987
50	0.0	0.0	0.0	chr12	22335336	22335378	(110939931)	+	(CA)n	Simple_repeat	1	43	(0)	811988
17	29.6	1.7	0.0	chr12	22335379	22335407	(110939902)	+	(CG)n	Simple_repeat	1	29	(0)	811989
14	20.5	2.6	0.0	chr12	22625288	22625326	(110649983)	+	(CCGC)n	Simple_repeat	1	40	(0)	812441
19	26.9	0.0	3.0	chr12	22625357	22625422	(110649887)	+	(GTC)n	Simple_repeat	1	66	(0)	812442
17	19.5	0.0	0.0	chr12	23641186	23641216	(109634093)	+	(AC)n	Simple_repeat	1	31	(0)	813852
33	6.5	2.0	2.0	chr12	24562449	24562498	(108712811)	+	(TG)n	Simple_repeat	1	51	(0)	815079
16	22.7	3.4	1.6	chr12	24562499	24562550	(108712759)	+	(TCGC)n	Simple_repeat	3	55	(0)	815080
53	0.0	0.0	0.0	chr12	24947168	24947212	(108328097)	+	(CA)n	Simple_repeat	1	45	(0)	815692
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
230	33.3	2.0	1.0	chr12	27383778	27383874	(105891435)	C	L1MEd	LINE/L1	(6421)	665	568	819471
196	35.4	12.5	0.0	chr12	27711383	27711557	(105563752)	C	L2c	LINE/L2	(5)	3382	3183	819997
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
30	22.1	0.0	0.0	chr12	30822294	30822356	(102452953)	+	A-rich	Low_complexity	1	63	(0)	824248
333	34.3	11.5	0.0	chr12	31017552	31017720	(102257589)	+	MIRc	SINE/MIR	67	257	(11)	824554
104	18.6	0.5	0.5	chr12	31017759	31017960	(102257349)	+	(AC)n	Simple_repeat	1	203	(0)	824555
16	13.2	0.0	0.0	chr12	31958968	31958992	(101316317)	+	(T)n	Simple_repeat	1	25	(0)	826460
660	24.0	3.9	1.2	chr12	31959044	31959216	(101316093)	+	MER5A	DNA/hAT-Charlie	12	189	(0)	826461
12	20.9	0.0	4.8	chr12	31959362	31959403	(101315906)	+	(CTGGTC)n	Simple_repeat	1	42	(0)	826462
17	16.4	0.0	4.4	chr12	31959530	31959574	(101315735)	+	G-rich	Low_complexity	1	45	(0)	826463
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
18	7.6	0.0	0.0	chr12	33440021	33440048	(99835261)	+	(GAGG)n	Simple_repeat	1	28	(0)	829057
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
16	9.2	7.7	5.4	chr12	40105598	40105651	(93169658)	+	(CGCCG)n	Simple_repeat	1	55	(0)	833296
15	33.1	1.4	1.4	chr12	40105897	40105969	(93169340)	+	(CCG)n	Simple_repeat	1	74	(0)	833297
13	5.2	0.0	0.0	chr12	42144751	42144770	(91130539)	+	(CCG)n	Simple_repeat	1	20	(0)	836072
561	27.6	6.0	0.3	chr12	42145087	42145286	(91130023)	+	MIRb	SINE/MIR	6	221	(47)	836073
12	16.5	0.0	0.0	chr12	43835773	43835799	(89439510)	+	(CGGCC)n	Simple_repeat	1	27	(0)	838633
14	18.5	4.8	6.2	chr12	43835973	43836034	(89439275)	+	(GCG)n	Simple_repeat	1	65	(0)	838634
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	17.1	5.4	3.4	chr12	45729238	45729306	(87546003)	+	(CCG)n	Simple_repeat	1	70	(0)	841279
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
11	22.1	3.9	3.8	chr12	46383051	46383101	(86892208)	+	(GCGGAG)n	Simple_repeat	1	53	(0)	842182
16	29.1	1.4	4.0	chr12	46383333	46383405	(86891904)	+	GA-rich	Low_complexity	1	74	(0)	842183
35	22.2	7.7	0.0	chr12	46383575	46383704	(86891605)	+	GA-rich	Low_complexity	1	140	(0)	842184
626	32.3	6.8	0.1	chr12	47812413	47812659	(85462650)	C	MIR	SINE/MIR	(0)	262	1	844234
220	32.6	9.4	2.9	chr12	47812744	47812882	(85462427)	C	MIRb	SINE/MIR	(116)	152	4	844235
3250	18.6	3.0	7.1	chr12	47962512	47963230	(85312079)	C	LTR8	LTR/ERV1	(0)	691	3	844504
13	13.1	0.0	0.0	chr12	47963539	47963563	(85311746)	+	(GCGC)n	Simple_repeat	1	25	(0)	844505
14	14.6	0.0	3.1	chr12	48004188	48004219	(85271090)	+	(AGGC)n	Simple_repeat	1	32	(0)	844526
16	13.2	0.0	0.0	chr12	48998772	48998805	(84276504)	+	(GT)n	Simple_repeat	1	34	(0)	846236
90	2.3	0.0	0.0	chr12	49264788	49264876	(84010433)	+	(CCCTTCCTC)n	Simple_repeat	1	89	(0)	846829
20	16.8	0.0	0.0	chr12	50057223	50057257	(83218052)	+	(GT)n	Simple_repeat	1	35	(0)	848345
20	22.6	2.1	0.0	chr12	50057355	50057401	(83217908)	+	(CA)n	Simple_repeat	1	48	(0)	848346
15	13.7	0.0	2.9	chr12	50057586	50057619	(83217690)	+	(CCCCT)n	Simple_repeat	1	34	(0)	848347
18	17.1	2.9	7.1	chr12	50057686	50057753	(83217556)	+	(GAGC)n	Simple_repeat	1	70	(0)	848348
1828	14.3	6.1	0.6	chr12	50842484	50842841	(82432468)	C	MER31A	LTR/ERV1	(0)	485	107	850117
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
17	21.9	0.0	6.7	chr12	51820964	51821023	(81454286)	+	(GGC)n	Simple_repeat	1	60	(0)	851950
30	22.9	1.1	3.4	chr12	51829756	51829867	(81445442)	+	GA-rich	Low_complexity	1	109	(0)	851965
209	29.2	12.8	5.3	chr12	51866308	51866495	(81408814)	+	L2b	LINE/L2	2659	2862	(557)	852036
347	20.7	1.4	3.0	chr12	52947862	52947970	(80327339)	+	L2a	LINE/L2	3257	3418	(8)	853733
2293	6.6	2.0	0.3	chr12	52948488	52948789	(80326520)	C	AluSc	SINE/Alu	(2)	307	1	853734
12	4.3	8.3	0.0	chr12	52965426	52965449	(80309860)	+	(GAG)n	Simple_repeat	1	26	(0)	853781
17	24.4	0.0	4.8	chr12	53180926	53180988	(80094321)	+	G-rich	Low_complexity	1	63	(0)	854225
13	20.3	0.0	4.7	chr12	53493035	53493077	(79782232)	+	G-rich	Low_complexity	1	43	(0)	854860
11	27.2	2.0	2.0	chr12	53493221	53493270	(79782039)	+	G-rich	Low_complexity	1	51	(0)	854861
113	0.0	0.0	0.0	chr12	53498909	53499004	(79776305)	+	(TG)n	Simple_repeat	1	96	(0)	854870
17	18.1	2.3	2.3	chr12	53738880	53738927	(79536382)	+	GA-rich	Low_complexity	1	48	(0)	855367
23	20.4	0.0	0.0	chr12	53751052	53751096	(79524213)	+	(AC)n	Simple_repeat	1	45	(0)	855388
15	22.1	3.2	4.6	chr12	53751635	53751697	(79523612)	+	G-rich	Low_complexity	1	65	(0)	855389
126	18.6	1.2	0.0	chr12	54211966	54212209	(79063100)	+	(AC)n	Simple_repeat	1	247	(0)	856057
22	9.8	4.3	2.1	chr12	55707813	55707858	(77567451)	+	(CCCG)n	Simple_repeat	1	48	(0)	858102
50	0.0	0.0	0.0	chr12	56021689	56021731	(77253578)	+	(TG)n	Simple_repeat	1	43	(0)	858733
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
37	0.0	0.0	0.0	chr12	57112147	57112178	(76163131)	+	(AC)n	Simple_repeat	1	32	(0)	860716
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
15	19.9	3.6	3.5	chr12	57430880	57430934	(75844375)	+	G-rich	Low_complexity	1	57	(0)	861302
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	31.2	0.0	0.0	chr12	57431186	57431196	(75844113)	+	(CGCA)n	Simple_repeat	1	54	(0)	861304
12	18.3	0.0	3.0	chr12	57754535	57754567	(75520742)	+	(CCTC)n	Simple_repeat	1	33	(0)	861784
18	17.1	2.9	7.1	chr12	57754990	57755064	(75520245)	+	(CTCCC)n	Simple_repeat	1	71	(0)	861785
14	7.0	2.9	5.7	chr12	57764891	57764924	(75510385)	+	(CTGCCT)n	Simple_repeat	1	35	(0)	861794
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
27	11.7	0.0	7.7	chr12	57846454	57846518	(75428791)	+	G-rich	Low_complexity	1	65	(0)	861916
616	9.6	0.0	0.0	chr12	58426148	58426230	(74849079)	+	L1PA7	LINE/L1	14	96	(6365)	862740
2104	12.0	2.7	0.0	chr12	59317272	59317563	(73957746)	C	AluSz	SINE/Alu	(12)	300	1	863955
994	27.2	6.7	8.8	chr12	59317564	59317627	(73957682)	C	L1MD2	LINE/L1	(475)	5884	5826	863954
343	24.9	10.3	1.9	chr12	59317631	59317790	(73957519)	C	LTR46	LTR/ERV1	(4)	456	282	863956
468	20.2	2.0	0.0	chr12	59317883	59317981	(73957328)	C	LTR46	LTR/ERV1	(359)	101	1	863956
13	17.4	0.0	2.9	chr12	59596063	59596096	(73679213)	+	(CGCCTC)n	Simple_repeat	1	34	(0)	864295
21	0.0	5.9	2.8	chr12	59596251	59596284	(73679025)	+	(GGA)n	Simple_repeat	1	36	(0)	864296
56	0.0	0.0	0.0	chr12	59597223	59597270	(73678039)	+	(AC)n	Simple_repeat	1	48	(0)	864297
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
3514	14.1	10.0	2.4	chr12	62653795	62653959	(70621350)	+	MER50	LTR/ERV1	1	174	(560)	868270
1711	13.8	8.5	0.7	chr12	62653960	62654241	(70621068)	+	AluJb	SINE/Alu	1	306	(6)	868271
13	21.4	4.7	0.0	chr12	64404711	64404753	(68870556)	+	(CCGCT)n	Simple_repeat	1	45	(0)	871078
202	38.5	0.0	0.0	chr12	64826607	64826684	(68448625)	C	L3b	LINE/CR1	(68)	5164	5087	871867
16	13.6	2.2	6.4	chr12	65121355	65121400	(68153909)	+	GA-rich	Low_complexity	1	47	(0)	872296
70	4.2	0.0	0.0	chr12	65779272	65779344	(67495965)	+	(CA)n	Simple_repeat	1	73	(0)	873329
520	26.0	5.7	1.5	chr12	65779397	65779554	(67495755)	+	MIRb	SINE/MIR	54	223	(45)	873330
31	7.2	2.3	0.0	chr12	65824408	65824451	(67450858)	+	(CA)n	Simple_repeat	1	45	(0)	873412
385	22.8	1.1	0.0	chr12	66131210	66131301	(67144008)	+	L1MA10	LINE/L1	6224	6316	(18)	873859
30	20.2	2.3	3.4	chr12	67648632	67648717	(65626592)	+	(GGC)n	Simple_repeat	1	88	(0)	876221
18	32.7	1.5	0.0	chr12	67648690	67648757	(65626552)	+	(GC)n	Simple_repeat	1	69	(0)	876222
12	11.5	3.3	3.2	chr12	67648900	67648929	(65626380)	+	GA-rich	Low_complexity	1	31	(0)	876223
21	20.5	5.5	4.2	chr12	68610765	68610855	(64664454)	+	(CCCGC)n	Simple_repeat	1	96	(0)	877715
19	6.1	5.7	0.0	chr12	69738825	69738859	(63536450)	+	(GCTCCCG)n	Simple_repeat	1	37	(0)	879832
18	18.5	8.2	0.0	chr12	69738860	69738884	(63536425)	+	(CGCTCCCG)n	Simple_repeat	2	66	(0)	879833
4833	12.6	16.2	2.3	chr12	70807587	70808619	(62466690)	+	MER11B	LTR/ERVK	33	1236	(0)	881451
2106	10.9	0.7	1.3	chr12	71839102	71839403	(61435906)	+	AluSx	SINE/Alu	1	300	(12)	882972
290	32.8	10.1	0.7	chr12	71839404	71839458	(61435851)	C	MIRc	SINE/MIR	(200)	68	6	882971
13	18.6	4.8	6.2	chr12	72272276	72272337	(61002972)	+	(GCGAG)n	Simple_repeat	1	65	(0)	883612
39	30.6	0.7	2.1	chr12	72272612	72272754	(61002555)	+	GA-rich	Low_complexity	1	144	(0)	883613
17	14.2	8.9	1.6	chr12	76764146	76764201	(56511108)	+	(GCTCGC)n	Simple_repeat	1	61	(0)	889814
12	7.8	3.2	6.2	chr12	76879075	76879105	(56396204)	+	(CCGCC)n	Simple_repeat	1	32	(0)	889997
16	16.5	0.0	0.0	chr12	78863812	78863838	(54411471)	+	A-rich	Low_complexity	1	27	(0)	892738
13	20.8	0.0	0.0	chr12	79934521	79934553	(53340756)	+	(CCCT)n	Simple_repeat	1	33	(0)	894280
12	15.3	5.3	2.5	chr12	79934885	79934922	(53340387)	+	(CGCTTC)n	Simple_repeat	1	40	(0)	894281
269	33.3	4.7	4.2	chr12	84805217	84805407	(48469902)	+	MLT1J1	LTR/ERVL-MaLR	78	269	(175)	900767
1960	23.6	5.3	2.0	chr12	84805422	84805910	(48469399)	+	MER67D	LTR/ERV1	1	506	(8)	900768
22	33.4	0.0	0.0	chr12	84912766	84912840	(48362469)	+	(GT)n	Simple_repeat	1	75	(0)	900920
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
19	11.5	5.9	3.7	chr12	89346735	89346785	(43928524)	+	A-rich	Low_complexity	1	54	(0)	906879
14	8.2	4.3	8.3	chr12	89351575	89351620	(43923689)	+	(CGCGCC)n	Simple_repeat	1	48	(0)	906880
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
27	23.0	1.4	1.4	chr12	89709271	89709343	(43565966)	+	(CGC)n	Simple_repeat	1	74	(0)	907475
18	12.0	0.0	0.0	chr12	89709389	89709415	(43565894)	+	(GC)n	Simple_repeat	1	27	(0)	907476
11	13.2	5.7	2.7	chr12	89709428	89709462	(43565847)	+	G-rich	Low_complexity	1	37	(0)	907477
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
13	12.7	0.0	0.0	chr12	94264499	94264524	(39010785)	+	(CTGGC)n	Simple_repeat	1	26	(0)	914949
2586	7.1	0.3	1.0	chr12	95549897	95550205	(37725104)	+	AluSq2	SINE/Alu	1	307	(6)	917439
645	1.3	0.0	0.0	chr12	96036021	96036095	(37239214)	+	tRNA-Asp-GAY	tRNA	1	75	(0)	918300
253	28.3	6.4	15.2	chr12	96906710	96907005	(36368304)	+	L2b	LINE/L2	3139	3396	(30)	919870
17	28.4	0.0	1.8	chr12	100573651	100573707	(32701602)	+	(GGC)n	Simple_repeat	1	57	(0)	925852
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
844	9.7	5.5	3.2	chr12	104215426	104215549	(29059760)	C	AluJo	SINE/Alu	(185)	127	1	932099
12	25.8	0.0	0.0	chr12	104216063	104216099	(29059210)	+	(CCGGCGG)n	Simple_repeat	1	37	(0)	932100
19	28.1	0.0	2.8	chr12	104303658	104303729	(28971580)	+	(GGCCG)n	Simple_repeat	1	72	(0)	932309
189	16.1	0.0	0.0	chr12	104456707	104456737	(28818572)	C	MER131	DNA?	(150)	65	35	932617
187	25.3	0.9	0.2	chr12	104670466	104670929	(28604380)	+	(CA)n	Simple_repeat	1	468	(0)	933061
233	23.4	8.6	14.1	chr12	104723206	104723348	(28551961)	C	MIRb	SINE/MIR	(75)	193	62	933175
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
23	28.5	1.3	0.0	chr12	106774607	106774682	(26500627)	+	GA-rich	Low_complexity	1	77	(0)	936818
13	23.2	0.0	0.0	chr12	106956029	106956064	(26319245)	+	(CCCGGC)n	Simple_repeat	1	36	(0)	937152
26	17.6	0.0	5.6	chr12	107321275	107321345	(25953964)	+	(GTGTGC)n	Simple_repeat	1	71	(0)	937869
14	18.8	5.0	4.8	chr12	107760887	107760946	(25514363)	+	(GCCGCG)n	Simple_repeat	1	63	(0)	938825
316	28.3	3.6	4.8	chr12	108214734	108214900	(25060409)	C	MamRep564	Unknown	(89)	268	104	939756
317	22.7	8.5	1.1	chr12	108563056	108563214	(24712095)	+	MIR1_Amn	SINE/MIR	51	237	(31)	940538
477	31.3	5.4	4.9	chr12	109572739	109573107	(23702202)	+	MamRep4096	DNA/hAT-Tip100	1	371	(55)	942773
26	6.3	0.0	0.0	chr12	109714197	109714230	(23561079)	+	(CCG)n	Simple_repeat	1	34	(0)	943153
16	16.0	2.2	4.3	chr12	110281725	110281770	(22993539)	+	(GAGGC)n	Simple_repeat	1	47	(0)	944415
211	25.5	20.3	5.6	chr12	110450531	110450569	(22824740)	+	L2a	LINE/L2	3106	3145	(281)	944771
2279	6.2	6.4	0.0	chr12	110450570	110450861	(22824448)	+	AluSx1	SINE/Alu	1	312	(0)	944772
2325	9.3	0.3	1.3	chr12	110469496	110469808	(22805501)	C	AluSx1	SINE/Alu	(2)	310	1	944813
11	24.4	4.0	1.9	chr12	110502042	110502091	(22773218)	+	(CCGTCA)n	Simple_repeat	1	52	(0)	944882
1156	9.8	0.0	0.0	chr12	110613713	110613865	(22661444)	C	AluSx4	SINE/Alu	(2)	308	156	945134
2334	10.9	0.0	0.0	chr12	110698847	110699148	(22576161)	+	AluSz6	SINE/Alu	2	303	(9)	945315
1803	12.5	4.3	2.7	chr12	110847283	110847577	(22427732)	+	AluJb	SINE/Alu	2	301	(11)	945709
210	24.5	0.0	2.0	chr12	110930223	110930272	(22345037)	C	MIRb	SINE/MIR	(0)	268	220	945930
175	24.1	0.2	0.5	chr12	110930341	110930747	(22344562)	+	(TG)n	Simple_repeat	1	408	(0)	945931
12	22.2	9.8	2.2	chr12	111368932	111369013	(21906296)	+	(CGGCGA)n	Simple_repeat	1	90	(0)	946920
14	13.1	0.0	0.0	chr12	111368992	111369017	(21906292)	+	(CGG)n	Simple_repeat	1	26	(0)	946921
475	28.4	4.1	2.1	chr12	111404740	111404883	(21870426)	C	MIRb	SINE/MIR	(22)	246	100	947028
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
13	28.3	1.6	3.1	chr12	111766730	111766792	(21508517)	+	G-rich	Low_complexity	1	64	(0)	947852
13	19.0	0.0	5.0	chr12	111766958	111766997	(21508312)	+	(GCCCGCT)n	Simple_repeat	1	40	(0)	947853
17	13.5	0.0	8.3	chr12	112108584	112108631	(21166678)	+	(GCCC)n	Simple_repeat	1	48	(0)	948493
217	33.4	11.3	0.8	chr12	113065218	113065362	(20209947)	C	MIR1_Amn	SINE/MIR	(24)	206	49	950707
788	24.9	2.3	0.0	chr12	113103720	113103888	(20171421)	C	MIR	SINE/MIR	(31)	231	59	950801
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
21	24.2	0.0	6.8	chr12	113335143	113335230	(19940079)	+	(CCCGC)n	Simple_repeat	1	88	(0)	951315
31	11.2	0.0	0.0	chr12	113478478	113478526	(19796783)	+	(GT)n	Simple_repeat	1	49	(0)	951680
131	37.7	0.3	0.7	chr12	114315086	114315656	(18959653)	+	(GT)n	Simple_repeat	1	573	(0)	953454
655	33.0	2.4	0.5	chr12	114315836	114316088	(18959221)	+	MIRb	SINE/MIR	1	262	(6)	953455
16	13.3	3.0	0.0	chr12	114399637	114399669	(18875640)	+	GA-rich	Low_complexity	1	34	(0)	953637
221	39.6	0.4	0.3	chr12	114903718	114904841	(18370468)	+	(GT)n	Simple_repeat	1	1129	(0)	954851
233	28.7	12.2	0.8	chr12	115457415	115457537	(17817772)	+	L2b	LINE/L2	2934	3072	(303)	956055
15	8.8	0.0	0.0	chr12	115507815	115507838	(17767471)	+	(ATT)n	Simple_repeat	1	24	(0)	956171
408	34.0	1.3	0.0	chr12	115508436	115508585	(17766724)	+	MIR	SINE/MIR	14	165	(97)	956172
362	27.3	16.9	0.8	chr12	116534954	116535082	(16740227)	+	MIRb	SINE/MIR	31	184	(84)	958312
457	30.3	10.6	0.0	chr12	116687776	116687953	(16587356)	C	MIRb	SINE/MIR	(31)	237	39	958701
13	14.2	3.2	0.0	chr12	117052752	117052782	(16222527)	+	(CCCACA)n	Simple_repeat	1	32	(0)	959454
205	31.3	5.8	2.7	chr12	117052870	117053053	(16222256)	+	L2c	LINE/L2	2787	2976	(443)	959455
28	21.0	7.0	2.4	chr12	117190092	117190206	(16085103)	+	G-rich	Low_complexity	1	123	(0)	959739
16	33.1	1.4	1.3	chr12	117190381	117190454	(16084855)	+	(CCG)n	Simple_repeat	1	75	(0)	959740
15	20.1	2.9	0.0	chr12	117190477	117190510	(16084799)	+	(CG)n	Simple_repeat	1	35	(0)	959741
14	23.7	4.0	5.1	chr12	118016895	118016907	(15258402)	+	(AGGCGG)n	Simple_repeat	1	76	(0)	961646
13	23.5	3.3	4.8	chr12	118016908	118016967	(15258342)	+	(GCG)n	Simple_repeat	1	62	(0)	961647
14	25.6	1.7	3.3	chr12	118104038	118104096	(15171213)	+	(GCCGG)n	Simple_repeat	1	60	(0)	961850
343	17.5	1.7	0.0	chr12	118135834	118135890	(15139419)	C	LSU-rRNA_Hsa	rRNA	(2344)	2691	2634	961947
204	33.5	7.6	1.1	chr12	118773935	118774118	(14501191)	C	L2b	LINE/L2	(213)	3162	2966	963329
35	5.0	0.0	0.0	chr12	119156612	119156652	(14118657)	+	(CCGGAG)n	Simple_repeat	1	41	(0)	964111
48	5.5	0.0	0.0	chr12	119156703	119156759	(14118550)	+	(AGCCGG)n	Simple_repeat	1	57	(0)	964112
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
29	0.0	0.0	0.0	chr12	120414299	120414323	(12860986)	+	(TG)n	Simple_repeat	1	25	(0)	966990
37	24.1	0.0	0.0	chr12	120414340	120414422	(12860887)	+	(GT)n	Simple_repeat	1	83	(0)	966991
15	20.6	6.0	0.0	chr12	120414422	120414471	(12860838)	+	GA-rich	Low_complexity	1	53	(0)	966992
627	22.4	17.5	0.0	chr12	120414503	120414672	(12860637)	C	MIRb	SINE/MIR	(0)	268	63	966993
244	29.9	9.9	1.9	chr12	120529536	120529692	(12745617)	C	MER5A	DNA/hAT-Charlie	(15)	174	4	967310
19	16.8	2.0	3.9	chr12	121352690	121352740	(11922569)	+	(GTT)n	Simple_repeat	1	52	(0)	969185
782	16.2	4.4	1.3	chr12	121352743	121352896	(11922413)	C	FAM	SINE/Alu	(14)	171	13	969186
20	10.8	5.0	0.0	chr12	121580570	121580609	(11694700)	+	G-rich	Low_complexity	1	42	(0)	969721
36	0.0	0.0	0.0	chr12	121659138	121659168	(11616141)	+	(CA)n	Simple_repeat	1	31	(0)	969965
15	22.1	0.0	2.3	chr12	121793406	121793455	(11481854)	+	(GCTCTGG)n	Simple_repeat	1	48	(0)	970345
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
20	25.4	4.9	1.2	chr12	122021767	122021847	(11253462)	+	(GGC)n	Simple_repeat	1	85	(0)	970921
50	5.6	0.0	0.0	chr12	122021917	122021972	(11253337)	+	(TG)n	Simple_repeat	1	56	(0)	970922
11	24.0	2.6	0.0	chr12	122022830	122022868	(11252441)	+	G-rich	Low_complexity	1	40	(0)	970925
1136	26.4	7.7	1.0	chr12	122064182	122064568	(11210741)	+	MLT1K	LTR/ERVL-MaLR	145	559	(36)	971015
20	25.1	2.3	4.5	chr12	122078969	122079055	(11196254)	+	(CCGCG)n	Simple_repeat	1	89	(0)	971061
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
23	13.4	0.0	0.0	chr12	124333756	124333796	(8941513)	+	(GGGTGG)n	Simple_repeat	1	41	(0)	975899
607	27.5	3.9	3.9	chr12	124334018	124334225	(8941084)	+	MIRb	SINE/MIR	16	223	(45)	975900
137	31.3	0.3	0.0	chr12	124479213	124479596	(8795713)	+	(CA)n	Simple_repeat	1	385	(0)	976129
44	35.2	0.6	0.6	chr12	124515560	124515635	(8759674)	+	(TG)n	Simple_repeat	1	75	(0)	976190
27	2.4	4.3	4.2	chr12	124515636	124515681	(8759628)	+	(TGTGAG)n	Simple_repeat	1	48	(0)	976191
44	35.2	0.6	0.6	chr12	124515682	124515776	(8759533)	+	(TG)n	Simple_repeat	2	97	(0)	976192
360	26.5	5.0	3.2	chr12	124515781	124515936	(8759373)	C	L1MD2	LINE/L1	(196)	6163	6005	976189
250	27.0	7.1	0.3	chr12	124538866	124538991	(8736318)	C	MIRb	SINE/MIR	(79)	183	47	976239
13	28.9	1.4	5.3	chr12	124539231	124539304	(8736005)	+	(CACT)n	Simple_repeat	1	75	(0)	976240
13	22.5	2.0	3.9	chr12	124539282	124539331	(8735978)	+	(CACTCA)n	Simple_repeat	1	51	(0)	976241
12	13.7	2.7	5.3	chr12	124863531	124863567	(8411742)	+	(CCCGGCG)n	Simple_repeat	1	38	(0)	976995
12	14.1	10.0	4.5	chr12	124863641	124863700	(8411609)	+	(ACAGCGC)n	Simple_repeat	1	66	(0)	976996
19	30.3	0.0	0.0	chr12	129903112	129903162	(3372147)	+	(CA)n	Simple_repeat	1	51	(0)	985826
211	25.0	2.4	2.4	chr12	130728206	130728864	(2546445)	+	(CACTCG)n	Simple_repeat	1	675	(0)	987117
2065	12.9	0.0	2.7	chr12	130826721	130827014	(2448295)	+	AluSx	SINE/Alu	3	288	(24)	987269
236	33.1	6.0	1.7	chr12	131131340	131131472	(2143837)	C	MIRb	SINE/MIR	(96)	172	30	987762
1889	16.8	0.7	1.3	chr12	131773340	131773643	(1501666)	C	AluJb	SINE/Alu	(10)	302	1	988559
136	24.0	3.8	5.3	chr12	132181059	132181643	(1093666)	+	(AC)n	Simple_repeat	1	607	(0)	989172
1396	25.9	13.1	0.9	chr12	132283421	132283950	(991359)	+	MER77	LTR/ERVL	1	604	(0)	989294
79	35.9	0.4	0.0	chr12	132284064	132284327	(990982)	+	(CA)n	Simple_repeat	1	265	(0)	989295
614	31.9	1.2	1.2	chr12	132284369	132284612	(990697)	C	MER113	DNA/hAT-Charlie	(4)	517	274	989296
58	50.1	0.3	1.8	chr12	132342754	132343355	(931954)	+	(TG)n	Simple_repeat	1	604	(0)	989353
570	31.6	2.2	1.7	chr12	132430121	132430300	(845009)	+	MIR	SINE/MIR	81	261	(1)	989445
2655	4.8	0.0	0.3	chr12	132430597	132430907	(844402)	+	AluY	SINE/Alu	1	310	(1)	989446
2243	11.3	0.0	0.0	chr12	132709677	132709977	(565332)	C	AluSx	SINE/Alu	(9)	303	3	989822
368	21.4	15.4	0.0	chr12	132710043	132710168	(565141)	+	L1M2	LINE/L1	5618	5766	(525)	989823
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
20	35.9	1.0	1.0	chr12	132711086	132711182	(564127)	+	G-rich	Low_complexity	1	98	(0)	989825
262	29.5	0.0	1.1	chr12	132711408	132711496	(563813)	+	Charlie5	DNA/hAT-Charlie	22	109	(2515)	989826
1938	10.5	4.0	2.7	chr12	132711506	132711801	(563508)	+	AluJo	SINE/Alu	1	300	(12)	989827
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
15	19.5	9.1	1.4	chr13	20415485	20415550	(93948778)	+	(GGCCAG)n	Simple_repeat	1	72	(0)	994218
12	14.9	8.1	0.0	chr13	21061305	21061341	(93302987)	+	(CTCCCAG)n	Simple_repeat	1	40	(0)	995404
456	16.6	5.4	2.9	chr13	21123779	21123896	(93240432)	C	LTR67B	LTR/ERVL	(9)	611	376	995559
348	25.0	10.6	5.9	chr13	21124112	21124264	(93240064)	C	LTR67B	LTR/ERVL	(268)	235	75	995559
2383	3.3	0.0	7.2	chr13	21124352	21124657	(93239671)	+	AluYc	SINE/Alu	1	284	(15)	995560
12	26.2	0.0	2.3	chr13	25372552	25372594	(88991734)	+	(GTGCGC)n	Simple_repeat	1	43	(0)	1001745
33	25.6	0.0	0.0	chr13	25372859	25372932	(88991396)	+	(AC)n	Simple_repeat	1	74	(0)	1001746
14	15.0	10.9	1.6	chr13	26186524	26186578	(88177750)	+	(GCGCACA)n	Simple_repeat	1	61	(0)	1002856
2877	4.8	0.0	0.0	chr13	26186766	26187075	(88177253)	C	AluY	SINE/Alu	(0)	311	2	1002857
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
16	24.0	2.0	0.0	chr13	26254578	26254626	(88109702)	+	(CCCCGGC)n	Simple_repeat	1	50	(0)	1002973
527	23.9	12.6	1.9	chr13	27131290	27131451	(87232877)	+	MIRc	SINE/MIR	71	252	(16)	1004365
2214	8.8	3.4	0.0	chr13	27361515	27361799	(87002529)	C	AluSx1	SINE/Alu	(17)	295	1	1004823
66	0.0	0.0	0.0	chr13	27361806	27361861	(87002467)	+	(GT)n	Simple_repeat	1	56	(0)	1004824
580	9.9	0.0	9.9	chr13	27361863	27361963	(87002365)	C	FRAM	SINE/Alu	(30)	146	56	1004825
14	26.4	3.7	0.0	chr13	27621849	27621902	(86742426)	+	(TCCT)n	Simple_repeat	1	56	(0)	1005252
13	20.3	6.7	0.0	chr13	28495215	28495259	(85869069)	+	(TCC)n	Simple_repeat	1	48	(0)	1006835
168	20.2	2.4	0.5	chr13	28531565	28531941	(85832387)	+	(TG)n	Simple_repeat	1	386	(0)	1006902
22	30.9	0.9	4.4	chr13	28532049	28532161	(85832167)	+	A-rich	Low_complexity	1	114	(0)	1006903
370	23.4	10.3	9.1	chr13	30674562	30674782	(83689546)	C	MER106A	DNA/hAT-Charlie	(11)	225	2	1010175
16	20.9	0.0	7.8	chr13	31161596	31161659	(83202669)	+	(TCCGCC)n	Simple_repeat	1	64	(0)	1010957
13	18.9	2.8	0.0	chr13	35984680	35984715	(78379613)	+	(ATTTTCC)n	Simple_repeat	1	37	(0)	1017908
31	0.0	0.0	0.0	chr13	35984898	35984924	(78379404)	+	(CA)n	Simple_repeat	1	27	(0)	1017909
17	10.5	3.2	0.0	chr13	36131433	36131463	(78232865)	+	(CCT)n	Simple_repeat	1	32	(0)	1018107
252	17.6	6.3	2.6	chr13	36999490	36999565	(77364763)	+	MER53	DNA/hAT	3	81	(112)	1019392
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
20	3.8	3.7	0.0	chr13	37870808	37870834	(76493494)	+	(AC)n	Simple_repeat	1	28	(0)	1020539
2209	11.2	0.6	1.3	chr13	40788745	40789056	(73575272)	C	AluSx	SINE/Alu	(1)	311	2	1024730
835	20.1	4.3	0.0	chr13	40789057	40789071	(73575257)	C	AluJo	SINE/Alu	(176)	136	122	1024729
15	18.3	0.0	2.6	chr13	40789604	40789642	(73574686)	+	(GAGCCG)n	Simple_repeat	1	39	(0)	1024731
12	25.3	1.8	5.2	chr13	42574018	42574074	(71790254)	+	GA-rich	Low_complexity	1	58	(0)	1027569
13	8.8	0.0	3.9	chr13	42574146	42574171	(71790157)	+	(CGCC)n	Simple_repeat	1	26	(0)	1027570
12	10.7	2.9	5.7	chr13	42574285	42574318	(71790010)	+	(AGCGCC)n	Simple_repeat	1	35	(0)	1027571
16	19.4	1.9	5.6	chr13	42574386	42574438	(71789890)	+	(GCC)n	Simple_repeat	1	54	(0)	1027572
398	34.5	8.0	6.2	chr13	43023884	43024279	(71340049)	C	L2c	LINE/L2	(35)	3340	2956	1028277
11	33.5	0.0	4.2	chr13	44575830	44575901	(69788427)	+	(GGAGGC)n	Simple_repeat	1	72	(0)	1030511
13	13.2	0.0	0.0	chr13	44576031	44576055	(69788273)	+	(GCG)n	Simple_repeat	1	25	(0)	1030512
270	31.4	3.2	5.0	chr13	45879525	45879685	(68484643)	+	MIRb	SINE/MIR	57	214	(54)	1033004
2180	8.6	3.9	1.3	chr13	46387926	46388226	(67976102)	+	AluSx1	SINE/Alu	1	309	(3)	1033815
768	25.2	6.2	2.8	chr13	46796212	46796427	(67567901)	+	MIR	SINE/MIR	9	232	(30)	1034438
13	19.7	0.0	6.5	chr13	49936438	49936483	(64427845)	+	G-rich	Low_complexity	1	46	(0)	1039354
21	21.6	3.8	3.6	chr13	50843398	50843479	(63520849)	+	(CGCCCG)n	Simple_repeat	1	82	(0)	1040728
30	11.8	8.0	1.2	chr13	51222279	51222353	(63141975)	+	(GGCGCG)n	Simple_repeat	1	81	(0)	1041254
13	8.5	0.0	3.7	chr13	51222574	51222600	(63141728)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1041255
229	22.1	0.8	3.2	chr13	52159787	52159872	(62204456)	+	MIRc	SINE/MIR	16	102	(166)	1042687
621	25.0	11.8	6.3	chr13	52159874	52160176	(62204152)	+	MLT1D	LTR/ERVL-MaLR	1	322	(183)	1042688
13	22.1	4.1	2.0	chr13	52652663	52652711	(61711617)	+	G-rich	Low_complexity	1	51	(0)	1043445
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
41	2.4	0.0	0.0	chr13	53201091	53201132	(61163196)	+	(CGC)n	Simple_repeat	1	42	(0)	1044310
7159	25.3	5.7	6.3	chr13	64684334	64684674	(49679654)	C	L1MB8	LINE/L1	(4326)	1239	895	1058854
31	0.0	0.0	0.0	chr13	64684675	64684701	(49679627)	+	(GT)n	Simple_repeat	1	27	(0)	1058860
7159	25.3	5.7	6.3	chr13	64684702	64685515	(49678813)	C	L1MB8	LINE/L1	(5973)	894	13	1058854
21	30.4	2.6	0.0	chr13	71864950	71865025	(42499303)	+	GA-rich	Low_complexity	1	78	(0)	1068013
16	33.7	0.0	0.0	chr13	71865169	71865221	(42499107)	+	(CA)n	Simple_repeat	1	53	(0)	1068014
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
18	8.7	0.0	0.0	chr13	74133796	74133820	(40230508)	+	(CT)n	Simple_repeat	1	25	(0)	1071554
25	26.0	0.0	2.9	chr13	74133820	74133889	(40230439)	+	(CA)n	Simple_repeat	1	70	(0)	1071555
19	12.4	0.0	0.0	chr13	74134159	74134193	(40230135)	+	(TGGGG)n	Simple_repeat	1	35	(0)	1071556
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
911	22.8	13.0	3.8	chr13	75538434	75538830	(38825498)	C	L1MC4	LINE/L1	(0)	8042	7604	1073517
16	18.9	0.0	0.0	chr13	77027214	77027243	(37337085)	+	G-rich	Low_complexity	1	30	(0)	1075601
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
65	1.7	0.0	0.0	chr13	77593260	77593319	(36771009)	+	(GT)n	Simple_repeat	1	60	(0)	1076445
14	16.9	0.0	2.9	chr13	77697539	77697573	(36666755)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	1076566
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
16	0.0	0.0	0.0	chr13	78659296	78659312	(35705016)	+	(A)n	Simple_repeat	1	17	(0)	1077841
28	0.0	0.0	0.0	chr13	78659313	78659339	(35704989)	+	(AAAG)n	Simple_repeat	1	27	(0)	1077842
277	25.0	6.2	0.0	chr13	79406598	79406673	(34957655)	+	Charlie17	DNA/hAT-Charlie	2834	2914	(2)	1078871
16	21.4	2.3	0.0	chr13	87671790	87671869	(26692459)	+	(GGC)n	Simple_repeat	1	81	(0)	1089326
13	13.1	0.0	0.0	chr13	87677539	87677563	(26686765)	+	(CGG)n	Simple_repeat	1	25	(0)	1089329
37	23.5	0.0	1.1	chr13	87677746	87677837	(26686491)	+	(CAG)n	Simple_repeat	1	92	(0)	1089330
14	14.3	0.0	3.0	chr13	93224661	93224693	(21139635)	+	(TTCCA)n	Simple_repeat	1	33	(0)	1096611
1225	24.1	6.4	5.2	chr13	93233868	93234391	(21129937)	+	LTR55	LTR/ERVL?	16	546	(2)	1096618
238	30.6	21.9	1.5	chr13	93234394	93234599	(21129729)	C	L2a	LINE/L2	(531)	2888	2629	1096616
196	22.5	0.0	0.0	chr13	94550361	94550400	(19813928)	C	L2b	LINE/L2	(10)	3365	3326	1098499
65	4.2	0.0	1.3	chr13	94550535	94550610	(19813718)	+	(TGGA)n	Simple_repeat	1	76	(0)	1098500
1924	11.3	3.4	3.1	chr13	94596564	94596855	(19767473)	C	AluJb	SINE/Alu	(19)	293	1	1098574
13	14.8	11.1	1.7	chr13	94967763	94967816	(19396512)	+	(GCGCGGC)n	Simple_repeat	1	60	(0)	1099183
26	28.2	1.2	0.0	chr13	97976248	97976327	(16388001)	+	(CCCCGA)n	Simple_repeat	1	81	(0)	1103821
578	24.0	0.7	0.0	chr13	98752852	98753001	(15611327)	C	MER5A	DNA/hAT-Charlie	(38)	151	1	1105188
227	35.1	0.7	1.3	chr13	99414431	99415371	(14948957)	+	(AC)n	Simple_repeat	1	948	(0)	1106203
339	28.2	16.5	1.4	chr13	99432648	99432863	(14931465)	C	L2b	LINE/L2	(2)	3373	3119	1106232
15	20.5	0.0	0.0	chr13	99501645	99501678	(14862650)	+	(GCT)n	Simple_repeat	1	34	(0)	1106362
17	28.7	0.0	0.0	chr13	99956289	99956332	(14407996)	+	(CA)n	Simple_repeat	1	44	(0)	1107112
13	30.0	1.9	0.0	chr13	99957048	99957100	(14407228)	+	(GCCCC)n	Simple_repeat	1	54	(0)	1107113
53	0.0	0.0	0.0	chr13	99957947	99957991	(14406337)	+	(CA)n	Simple_repeat	1	45	(0)	1107114
12	9.9	2.6	7.7	chr13	99972059	99972096	(14392232)	+	G-rich	Low_complexity	1	39	(0)	1107129
11	31.8	1.7	1.6	chr13	99982305	99982364	(14381964)	+	(GGCCCC)n	Simple_repeat	1	61	(0)	1107142
31	0.0	0.0	0.0	chr13	99982754	99982782	(14381546)	+	(CCA)n	Simple_repeat	1	29	(0)	1107143
47	0.0	0.0	0.0	chr13	99997029	99997068	(14367260)	+	(TG)n	Simple_repeat	1	40	(0)	1107150
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
17	14.0	0.0	6.7	chr13	100675097	100675141	(13689187)	+	G-rich	Low_complexity	1	45	(0)	1108313
547	33.2	20.7	0.9	chr13	100675717	100676412	(13687916)	+	L2c	LINE/L2	1811	2680	(739)	1108314
1225	16.0	2.8	3.3	chr13	102845414	102845626	(11518702)	+	AluJr	SINE/Alu	85	296	(16)	1111373
39	16.9	2.7	8.5	chr13	106567412	106567560	(7796768)	+	(CCCGC)n	Simple_repeat	1	153	(0)	1116230
13	22.9	2.3	2.3	chr13	106567593	106567635	(7796693)	+	(CTC)n	Simple_repeat	1	44	(0)	1116231
3872	13.9	3.5	0.0	chr13	106795682	106796291	(7568037)	+	MER41B	LTR/ERV1	3	634	(0)	1116551
270	34.6	2.4	13.7	chr13	106796292	106796404	(7567924)	C	L3b	LINE/CR1	(197)	5035	4935	1116550
100	37.6	0.6	1.4	chr13	110108425	110108922	(4255406)	+	(GT)n	Simple_repeat	1	501	(0)	1120904
15	22.1	3.6	3.5	chr13	110307028	110307083	(4057245)	+	(GGC)n	Simple_repeat	1	58	(0)	1121126
18	16.2	9.6	2.5	chr13	110636320	110636392	(3727936)	+	(TGCACA)n	Simple_repeat	1	80	(0)	1121537
12	33.6	1.2	3.6	chr13	110636411	110636493	(3727835)	+	(CACGCA)n	Simple_repeat	1	84	(0)	1121538
141	35.2	2.5	2.7	chr13	110873652	110874508	(3489820)	+	(CA)n	Simple_repeat	1	878	(0)	1121889
12	22.6	4.2	2.0	chr13	110874579	110874626	(3489702)	+	(TCCAGC)n	Simple_repeat	1	50	(0)	1121890
13	17.6	0.0	2.9	chr13	110914896	110914929	(3449399)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1121925
17	14.6	0.0	4.8	chr13	110915076	110915117	(3449211)	+	G-rich	Low_complexity	1	42	(0)	1121926
19	30.8	3.0	4.4	chr13	112056342	112056472	(2307856)	+	G-rich	Low_complexity	1	135	(0)	1123114
15	16.3	4.9	0.0	chr13	112104397	112104437	(2259891)	+	G-rich	Low_complexity	1	43	(0)	1123180
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
12	23.4	0.0	7.5	chr13	112943975	112944027	(1420301)	+	G-rich	Low_complexity	1	53	(0)	1124076
258	24.7	7.3	1.1	chr13	113153757	113153846	(1210482)	+	L1MB4	LINE/L1	6085	6180	(0)	1124252
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
26	25.2	4.8	3.1	chr13	113297341	113297347	(1066981)	+	(GCGCCCC)n	Simple_repeat	1	15	(115)	1124475
12	29.0	2.8	4.0	chr13	113297348	113297419	(1066909)	+	(CGCAC)n	Simple_repeat	1	74	(0)	1124476
12	15.8	2.6	5.0	chr13	113394174	113394212	(970116)	+	(GGCGG)n	Simple_repeat	1	40	(0)	1124636
264	28.4	9.0	4.1	chr13	113531926	113532072	(832256)	+	MIR	SINE/MIR	9	163	(99)	1124825
15	26.3	5.5	3.1	chr13	113584448	113584538	(779790)	+	(CGCACG)n	Simple_repeat	1	96	(0)	1124892
16	21.4	2.3	0.0	chr13	113584581	113584623	(779705)	+	GA-rich	Low_complexity	1	44	(0)	1124893
224	28.2	4.2	0.4	chr13	113613487	113614282	(750046)	+	(GT)n	Simple_repeat	1	829	(0)	1124915
23	23.3	1.8	0.0	chr13	113860119	113860173	(504155)	+	GA-rich	Low_complexity	1	56	(0)	1125060
73	30.4	0.5	0.0	chr13	114131707	114131913	(232415)	+	(CA)n	Simple_repeat	1	208	(0)	1125265
11	21.1	8.2	0.0	chr13	114132494	114132542	(231786)	+	(CGCGCC)n	Simple_repeat	1	53	(0)	1125266
410	26.7	18.2	1.6	chr13	114140883	114141206	(223122)	+	L1MD1	LINE/L1	5662	6078	(281)	1125274
31	5.8	0.0	0.0	chr13	114141248	114141283	(223045)	+	(AC)n	Simple_repeat	1	36	(0)	1125275
313	33.4	0.5	0.5	chr13	114141310	114142422	(221906)	+	(CA)n	Simple_repeat	1	1118	(0)	1125276
1563	16.7	4.0	6.8	chr13	114226969	114227279	(137049)	+	AluJb	SINE/Alu	1	302	(10)	1125371
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
1856	6.7	9.7	2.6	chr13	114280990	114281258	(83070)	+	AluSz	SINE/Alu	1	290	(22)	1125452
12	15.8	0.0	3.3	chr13	114281551	114281580	(82748)	+	G-rich	Low_complexity	1	30	(0)	1125453
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
1211	18.9	6.9	1.8	chr14	20578090	20578402	(86465316)	+	L1MEc	LINE/L1	6089	6419	(620)	1128283
505	22.6	4.6	2.7	chr14	20578415	20578564	(86465154)	C	LTR55	LTR/ERVL?	(101)	447	295	1128288
657	1.4	0.0	0.0	chr14	20613399	20613472	(86430246)	C	tRNA-Pro-CCY	tRNA	(1)	74	1	1128342
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
624	2.7	0.0	0.0	chr14	20613790	20613862	(86429856)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	1128344
544	0.0	0.0	22.3	chr14	20653099	20653192	(86390526)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128415
563	0.0	0.0	18.0	chr14	20683273	20683361	(86360357)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	1128459
25	22.4	2.5	2.4	chr14	21092542	21092622	(85951096)	+	(GGCTGA)n	Simple_repeat	1	83	(0)	1129071
23	17.2	1.9	0.0	chr14	21092584	21092635	(85951083)	+	(GGCGGA)n	Simple_repeat	1	53	(0)	1129072
14	25.2	1.8	3.6	chr14	21526253	21526307	(85517411)	+	(CGG)n	Simple_repeat	1	56	(0)	1129925
12	20.6	0.0	11.4	chr14	21526387	21526456	(85517262)	+	G-rich	Low_complexity	1	70	(0)	1129926
33	0.0	0.0	0.0	chr14	21556722	21556752	(85486966)	+	(TCAT)n	Simple_repeat	1	31	(0)	1130006
13	19.4	0.0	2.7	chr14	22982543	22982579	(84061139)	+	(CGCCCCC)n	Simple_repeat	1	37	(0)	1132084
14	17.1	2.3	4.5	chr14	23161572	23161614	(83882104)	+	(GGTG)n	Simple_repeat	1	44	(0)	1132385
1958	9.4	0.4	0.0	chr14	23161680	23161944	(83881774)	+	AluSz	SINE/Alu	35	300	(12)	1132386
19	10.2	7.1	0.0	chr14	23306619	23306660	(83737058)	+	(AGCCC)n	Simple_repeat	1	45	(0)	1132674
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
14	25.9	6.7	1.2	chr14	23544948	23545022	(83498696)	+	(CTCTT)n	Simple_repeat	1	80	(0)	1133015
12	13.9	6.2	0.0	chr14	23551460	23551491	(83492227)	+	(CCCT)n	Simple_repeat	1	34	(0)	1133022
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
16	22.2	0.0	0.0	chr14	24036320	24036361	(83007357)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	1133673
14	18.4	2.1	4.2	chr14	24141475	24141521	(82902197)	+	(GCCCCCG)n	Simple_repeat	1	48	(0)	1133811
185	34.8	1.7	4.2	chr14	24242824	24242943	(82800775)	+	MIRc	SINE/MIR	56	172	(96)	1133958
963	30.8	10.3	3.0	chr14	25132595	25133261	(81910457)	+	MamGypLTR3	LTR/Gypsy	162	882	(12)	1135145
18	16.3	0.0	0.0	chr14	30622341	30622376	(76421342)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	1142089
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
382	24.0	18.4	1.4	chr14	31420929	31421076	(75622642)	C	MIR3	SINE/MIR	(18)	190	12	1143608
29	20.8	0.0	0.0	chr14	32939624	32939680	(74104038)	+	A-rich	Low_complexity	1	57	(0)	1145783
23	26.6	2.1	3.1	chr14	32939778	32939872	(74103846)	+	G-rich	Low_complexity	1	97	(0)	1145784
24	6.1	2.9	0.0	chr14	33996423	33996456	(73047262)	+	(GT)n	Simple_repeat	1	35	(0)	1147040
19	11.1	3.6	6.9	chr14	34630043	34630098	(72413620)	+	(CCCGCG)n	Simple_repeat	1	58	(0)	1148281
15	19.5	0.0	0.0	chr14	34714549	34714583	(72329135)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1148493
13	15.9	0.0	0.0	chr14	34874153	34874180	(72169538)	+	G-rich	Low_complexity	1	28	(0)	1148821
11	20.5	5.1	0.0	chr14	34982680	34982718	(72061000)	+	(TCAGCTC)n	Simple_repeat	1	41	(0)	1149088
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
3548	4.7	0.7	0.2	chr14	38190638	38191083	(68852635)	+	LTR7	LTR/ERV1	1	448	(2)	1153970
19525	8.9	5.3	4.2	chr14	38191086	38194338	(68849380)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	1153970
2305	7.9	1.0	0.0	chr14	39174459	39174749	(67868969)	+	AluSx	SINE/Alu	1	294	(18)	1155291
3314	4.0	0.2	10.8	chr14	41599669	41600169	(65443549)	C	LTR7	LTR/ERV1	(2)	448	1	1158303
228	34.4	2.4	7.5	chr14	41600170	41600203	(65443515)	+	L2a	LINE/L2	3393	3425	(1)	1158302
20	0.0	0.0	6.2	chr14	41606859	41606890	(65436828)	+	(GCC)n	Simple_repeat	1	32	(0)	1158309
17	17.4	2.0	4.0	chr14	41606965	41607013	(65436705)	+	(CCCGGC)n	Simple_repeat	1	50	(0)	1158310
17	24.4	0.0	0.0	chr14	41607135	41607173	(65436545)	+	(TG)n	Simple_repeat	1	39	(0)	1158311
28	31.7	0.0	1.1	chr14	41608188	41608279	(65435439)	+	(GT)n	Simple_repeat	1	92	(0)	1158312
1183	21.4	6.8	0.8	chr14	46322018	46322281	(60721437)	+	MER67D	LTR/ERV1	1	281	(233)	1164140
862	20.7	1.1	1.6	chr14	46322283	46322464	(60721254)	+	MLT2B1	LTR/ERVL	55	235	(285)	1164141
400	20.0	13.5	2.5	chr14	46322628	46322745	(60720973)	+	MER5A1	DNA/hAT-Charlie	1	133	(33)	1164142
40	20.7	3.2	0.0	chr14	47674786	47674879	(59368839)	+	(CA)n	Simple_repeat	1	97	(0)	1165885
22	20.0	0.0	6.9	chr14	47674984	47675055	(59368663)	+	(GCG)n	Simple_repeat	1	72	(0)	1165886
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
17	4.3	0.0	0.0	chr14	50312360	50312383	(56731335)	+	(CTCC)n	Simple_repeat	1	24	(0)	1169748
22	14.7	2.2	0.0	chr14	50312611	50312655	(56731063)	+	(CGCCCC)n	Simple_repeat	1	46	(0)	1169749
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
19	11.5	2.6	0.0	chr14	50560764	50560801	(56482917)	+	(GGGCGGC)n	Simple_repeat	1	39	(0)	1170157
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
16	29.8	1.6	0.0	chr14	51095108	51095183	(55948535)	+	(CCGCC)n	Simple_repeat	1	77	(0)	1170951
12	28.2	1.5	4.5	chr14	53355698	53355762	(53687956)	+	GA-rich	Low_complexity	1	66	(0)	1174414
39	22.3	3.6	4.2	chr14	53956783	53956921	(53086797)	+	(CTCC)n	Simple_repeat	1	144	(0)	1175257
37	0.0	0.0	0.0	chr14	56814757	56814788	(50228930)	+	(GT)n	Simple_repeat	1	32	(0)	1179769
21	26.4	0.0	0.0	chr14	56817114	56817164	(50226554)	+	(GT)n	Simple_repeat	1	51	(0)	1179773
23	31.6	0.0	0.0	chr14	56817165	56817186	(50226532)	+	(GCGTGT)n	Simple_repeat	15	79	(0)	1179772
13	15.1	5.1	2.4	chr14	57268730	57268768	(49774950)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1180525
13	31.1	1.2	4.8	chr14	57390736	57390817	(49652901)	+	G-rich	Low_complexity	1	83	(0)	1180687
13	24.4	0.0	4.3	chr14	57391075	57391121	(49652597)	+	GA-rich	Low_complexity	1	47	(0)	1180688
13	16.4	0.0	10.0	chr14	57391105	57391154	(49652564)	+	(GGC)n	Simple_repeat	1	50	(0)	1180689
13	13.2	0.0	0.0	chr14	57391183	57391207	(49652511)	+	(CAG)n	Simple_repeat	1	25	(0)	1180690
15	11.3	3.5	0.0	chr14	60723759	60723787	(46319931)	+	(GCG)n	Simple_repeat	1	30	(0)	1185457
18	16.0	0.0	0.0	chr14	60723831	60723865	(46319853)	+	(CCG)n	Simple_repeat	1	35	(0)	1185458
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
53	0.0	2.0	0.0	chr14	61188607	61188655	(45855063)	+	(GT)n	Simple_repeat	1	50	(0)	1186117
41	0.0	0.0	0.0	chr14	61188705	61188739	(45854979)	+	(GT)n	Simple_repeat	1	35	(0)	1186117
2250	6.9	0.4	0.4	chr14	61188740	61189014	(45854704)	C	AluSq	SINE/Alu	(33)	280	6	1186118
13	9.8	9.1	0.0	chr14	61280990	61281022	(45762696)	+	(AGGCCC)n	Simple_repeat	1	36	(0)	1186281
234	40.6	0.7	1.4	chr14	61609436	61609575	(45434143)	C	MamSINE1	SINE/tRNA-RTE	(34)	256	118	1186763
1785	20.0	22.0	6.5	chr14	61609817	61610448	(45433270)	+	Zaphod3	DNA/hAT-Tip100	1	758	(1865)	1186764
13	21.9	2.3	2.2	chr14	61695857	61695900	(45347818)	+	(GCCC)n	Simple_repeat	1	45	(0)	1186913
8687	4.1	1.0	0.8	chr14	62781031	62782098	(44261620)	C	MER11C	LTR/ERVK	(0)	1071	1	1188275
13	9.1	0.0	3.9	chr14	63543158	63543183	(43500535)	+	(GGGA)n	Simple_repeat	1	26	(0)	1189433
1815	15.3	3.9	0.2	chr14	64701097	64701569	(42342149)	C	L1MB8	LINE/L1	(579)	5599	5111	1191791
212	31.1	6.3	5.6	chr14	64701957	64702082	(42341636)	+	MIRc	SINE/MIR	99	225	(43)	1191796
208	25.5	7.8	8.7	chr14	64702027	64702129	(42341589)	+	AmnSINE1	SINE/5S-Deu-L2	473	574	(1)	1191797
421	33.9	3.8	4.1	chr14	64707746	64707965	(42335753)	+	MIRb	SINE/MIR	6	237	(31)	1191803
124	0.0	2.6	0.0	chr14	64716436	64716551	(42327167)	+	(AC)n	Simple_repeat	1	119	(0)	1191816
43	0.0	0.0	0.0	chr14	64717113	64717149	(42326569)	+	(GT)n	Simple_repeat	1	37	(0)	1191817
20	4.2	0.0	0.0	chr14	64765018	64765073	(42278645)	+	(GT)n	Simple_repeat	1	56	(0)	1191873
220	21.6	2.7	0.0	chr14	64765806	64766316	(42277402)	+	(GT)n	Simple_repeat	1	525	(0)	1191875
151	19.6	3.4	2.2	chr14	65173933	65174320	(41869398)	+	(GT)n	Simple_repeat	1	401	(0)	1192581
21	23.2	5.6	1.3	chr14	65174544	65174615	(41869103)	+	(CT)n	Simple_repeat	1	76	(0)	1192582
505	26.0	14.1	3.3	chr14	65282879	65283093	(41760625)	+	MIRb	SINE/MIR	12	253	(15)	1192809
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
14	24.0	0.0	0.0	chr14	68978968	68979006	(38064712)	+	(TCCCGG)n	Simple_repeat	1	39	(0)	1198596
21	18.5	1.7	3.3	chr14	68979117	68979175	(38064543)	+	(GCTGG)n	Simple_repeat	1	60	(0)	1198597
11	11.2	6.9	0.0	chr14	68979327	68979355	(38064363)	+	G-rich	Low_complexity	1	31	(0)	1198598
396	32.7	8.0	1.2	chr14	70046399	70046589	(36997129)	+	MIR3	SINE/MIR	6	196	(34)	1200593
2513	4.7	0.3	4.4	chr14	70359990	70360306	(36683412)	+	AluSq10	SINE/Alu	1	304	(9)	1201067
17	5.5	10.5	0.0	chr14	71932316	71932353	(35111365)	+	(GCCCAGGT)n	Simple_repeat	1	42	(0)	1203541
16	27.8	0.0	0.0	chr14	73950046	73950091	(33093627)	+	(CAGCGA)n	Simple_repeat	1	46	(0)	1207453
12	19.9	0.0	0.0	chr14	74763532	74763560	(32280158)	+	(CCG)n	Simple_repeat	1	29	(0)	1209138
13	19.4	4.8	8.1	chr14	74882086	74882168	(32161550)	+	(GGCCG)n	Simple_repeat	1	87	(0)	1209340
350	32.9	4.4	14.8	chr14	76957290	76957546	(30086172)	+	MIRb	SINE/MIR	27	255	(13)	1213293
13	12.5	0.0	0.0	chr14	76957753	76957778	(30085940)	+	(CTGCC)n	Simple_repeat	1	26	(0)	1213294
1908	16.9	0.0	0.7	chr14	76957897	76958197	(30085521)	C	AluJr	SINE/Alu	(13)	299	1	1213295
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
20	22.9	3.9	6.5	chr14	77098386	77098489	(29945229)	+	GA-rich	Low_complexity	1	108	(0)	1213611
18	11.9	0.0	5.0	chr14	77141539	77141578	(29902140)	+	(GCC)n	Simple_repeat	1	40	(0)	1213680
481	22.9	16.1	9.3	chr14	77142138	77142362	(29901356)	+	MIR	SINE/MIR	5	241	(21)	1213681
762	26.9	4.3	1.9	chr14	77142376	77142619	(29901099)	C	MIRb	SINE/MIR	(1)	267	9	1213682
1385	24.1	11.3	8.3	chr14	77208108	77208682	(29835036)	C	LTR67B	LTR/ERVL	(20)	600	7	1213827
303	28.1	1.2	0.0	chr14	77208698	77208779	(29834939)	+	MIR	SINE/MIR	180	262	(0)	1213826
312	29.5	15.7	2.1	chr14	77209098	77209284	(29834434)	C	MIRc	SINE/MIR	(35)	233	17	1213828
16	24.0	0.0	5.1	chr14	77616376	77616434	(29427284)	+	(CCCCG)n	Simple_repeat	1	59	(0)	1214574
18	9.4	2.9	0.0	chr14	77616453	77616486	(29427232)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1214575
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
45	0.0	2.4	0.0	chr14	78892775	78892816	(28150902)	+	(TG)n	Simple_repeat	1	43	(0)	1216953
232	30.1	7.6	2.7	chr14	82075653	82075727	(24967991)	C	MER91A	DNA/hAT-Tip100	(0)	196	118	1221608
15	20.1	0.0	5.1	chr14	85531858	85531896	(21511822)	+	(GT)n	Simple_repeat	1	39	(0)	1226390
20	15.9	0.0	0.0	chr14	88323219	88323253	(18720465)	+	(CA)n	Simple_repeat	1	35	(0)	1230269
12	17.6	2.4	4.7	chr14	88323312	88323353	(18720365)	+	(GCCCCG)n	Simple_repeat	1	43	(0)	1230270
660	28.6	1.5	0.5	chr14	88977591	88977783	(18065935)	C	MIR	SINE/MIR	(47)	215	21	1231305
351	22.9	1.9	6.2	chr14	88977785	88977896	(18065822)	+	MamRep564	Unknown	143	249	(108)	1231306
366	32.0	12.0	1.7	chr14	88978045	88978216	(18065502)	+	MER91A	DNA/hAT-Tip100	5	196	(0)	1231307
975	28.0	5.8	2.8	chr14	89773560	89773959	(17269759)	+	MLT2F	LTR/ERVL	1	413	(250)	1232705
976	19.0	5.1	1.9	chr14	89773976	89774184	(17269534)	C	MER20	DNA/hAT-Charlie	(1)	218	3	1232706
336	34.2	2.6	5.6	chr14	89774188	89774382	(17269336)	+	MLT2F	LTR/ERVL	469	657	(6)	1232705
304	29.3	5.2	1.5	chr14	89956314	89956481	(17087237)	+	MIR	SINE/MIR	88	260	(8)	1233010
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
12	18.6	5.4	0.0	chr14	90383659	90383695	(16660023)	+	(TCGCCCT)n	Simple_repeat	1	39	(0)	1233810
338	27.5	2.2	7.1	chr14	90384201	90384341	(16659377)	C	MIRb	SINE/MIR	(130)	138	2	1233811
14	21.1	3.8	3.6	chr14	91060370	91060422	(15983296)	+	(CCG)n	Simple_repeat	1	55	(0)	1234941
39	15.4	0.0	0.0	chr14	91397440	91397504	(15646214)	+	(AC)n	Simple_repeat	1	65	(0)	1235627
20	15.7	1.9	3.7	chr14	91417700	91417752	(15625966)	+	(GCGCCCC)n	Simple_repeat	1	54	(0)	1235654
233	22.6	1.9	9.5	chr14	91509112	91509250	(15534468)	C	MIR1_Amn	SINE/MIR	(75)	155	27	1235826
18	28.3	1.0	5.9	chr14	91510623	91510722	(15532996)	+	(CGGCCC)n	Simple_repeat	1	101	(0)	1235829
20	27.5	0.0	3.0	chr14	92748493	92748559	(14295159)	+	(GGC)n	Simple_repeat	1	67	(0)	1238154
2159	14.1	0.3	0.0	chr14	93051334	93051639	(13992079)	+	AluSz	SINE/Alu	1	307	(5)	1238712
307	29.4	14.2	3.1	chr14	93051640	93051741	(13991977)	C	Charlie15a	DNA/hAT-Charlie	(94)	130	4	1238711
1478	27.6	13.3	2.1	chr14	93746295	93747521	(13296197)	C	L2a	LINE/L2	(206)	3220	1812	1239919
17	16.7	2.4	2.3	chr14	93787661	93787702	(13256016)	+	(GCA)n	Simple_repeat	1	43	(0)	1240007
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
13	16.9	3.0	0.0	chr14	94081174	94081206	(12962512)	+	(GCAGCT)n	Simple_repeat	1	34	(0)	1240581
273	23.3	1.1	6.5	chr14	95713757	95713848	(11329870)	+	L2b	LINE/L2	3073	3159	(216)	1243577
3108	21.4	5.6	3.6	chr14	95948412	95948997	(11094721)	C	MER97a	DNA/hAT-Tip100	(27)	863	245	1243989
1702	15.9	1.4	4.0	chr14	95948998	95949299	(11094419)	C	AluJo	SINE/Alu	(17)	295	2	1243990
296	28.0	6.1	0.0	chr14	95953593	95953685	(11090033)	+	L2b	LINE/L2	3253	3351	(24)	1243996
32	16.4	4.4	0.0	chr14	95953988	95954055	(11089663)	+	GA-rich	Low_complexity	1	71	(0)	1243997
254	19.6	0.0	5.1	chr14	97024324	97024382	(10019336)	+	MER4-int	LTR/ERV1	1107	1162	(5436)	1245931
14	15.2	0.0	7.1	chr14	97024732	97024773	(10018945)	+	(AATG)n	Simple_repeat	1	42	(0)	1245932
238	35.8	1.0	0.5	chr14	98835161	98836135	(8207583)	+	(CACA)n	Simple_repeat	1	981	(0)	1249027
24	6.8	1.9	7.3	chr14	99270735	99270788	(7772930)	+	(TCCCCC)n	Simple_repeat	1	55	(0)	1249752
11	10.6	0.0	10.5	chr14	99271098	99271135	(7772583)	+	(CCCCAG)n	Simple_repeat	1	38	(0)	1249753
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
69	31.3	2.3	3.4	chr14	99321319	99321666	(7722052)	+	(ACTCAC)n	Simple_repeat	1	356	(0)	1249858
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
264	28.9	7.5	0.0	chr14	100214710	100214844	(6828874)	C	MIR3	SINE/MIR	(52)	156	11	1251448
251	33.3	1.2	1.2	chr14	100318581	100318665	(6725053)	C	MIRc	SINE/MIR	(133)	135	51	1251657
2111	10.6	5.8	0.0	chr14	100318754	100319045	(6724673)	C	AluSx1	SINE/Alu	(2)	310	1	1251658
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
20	15.0	1.7	6.7	chr14	101561290	101561348	(5482370)	+	(GCCC)n	Simple_repeat	1	60	(0)	1253316
14	14.9	5.4	0.0	chr14	102086933	102086969	(4956749)	+	(CCCCAGT)n	Simple_repeat	1	39	(0)	1254193
16	18.9	0.0	0.0	chr14	103121875	103121904	(3921814)	+	G-rich	Low_complexity	1	30	(0)	1256236
2301	10.3	0.0	0.0	chr14	103208100	103208401	(3835317)	C	AluSg	SINE/Alu	(8)	302	1	1256368
102	20.3	0.0	0.0	chr14	103372130	103372335	(3671383)	+	(CA)n	Simple_repeat	1	206	(0)	1256678
31	3.0	0.0	0.0	chr14	103372473	103372506	(3671212)	+	(TTTTTTG)n	Simple_repeat	1	34	(0)	1256679
16	18.9	2.3	2.2	chr14	103385444	103385487	(3658231)	+	(GCG)n	Simple_repeat	1	45	(0)	1256712
14	20.8	0.0	0.0	chr14	103385584	103385616	(3658102)	+	(CTC)n	Simple_repeat	1	33	(0)	1256713
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
220	30.0	6.5	2.0	chr14	103921095	103921196	(3122522)	+	MIRc	SINE/MIR	17	123	(145)	1257797
1127	27.9	9.6	3.5	chr14	104649574	104650142	(2393576)	C	Charlie2b	DNA/hAT-Charlie	(185)	2597	1991	1258647
13	19.9	4.9	0.0	chr14	104650405	104650445	(2393273)	+	(CCACTCC)n	Simple_repeat	1	43	(0)	1258648
19	15.6	4.8	4.5	chr14	104650446	104650463	(2393255)	+	(CCCTCC)n	Simple_repeat	5	66	(0)	1258649
274	28.8	2.4	1.2	chr14	104871953	104872033	(2171685)	+	L2b	LINE/L2	3288	3369	(6)	1258957
179	23.0	0.2	4.3	chr14	104872108	104872590	(2171128)	+	(GT)n	Simple_repeat	1	484	(0)	1258958
14	19.9	6.6	3.1	chr14	105398207	105398267	(1645451)	+	(CGCCC)n	Simple_repeat	1	65	(0)	1259622
13	22.7	5.0	3.2	chr14	105398663	105398722	(1644996)	+	(CCCCCGA)n	Simple_repeat	1	63	(0)	1259623
14	13.2	2.9	2.8	chr14	105398830	105398864	(1644854)	+	G-rich	Low_complexity	1	36	(0)	1259624
13	17.6	2.4	4.7	chr15	25438205	25438246	(76552943)	+	(CGCCC)n	Simple_repeat	1	43	(0)	1269998
337	20.8	0.0	0.0	chr15	26082234	26082305	(75908884)	C	tRNA-Glu-GAG_	tRNA	(3)	72	1	1270993
466	23.8	2.8	0.0	chr15	26201443	26201547	(75789642)	+	MLT1I	LTR/ERVL-MaLR	296	403	(8)	1271164
734	30.9	10.9	1.1	chr15	26201585	26201964	(75789225)	+	MLT1I-int	LTR/ERVL-MaLR	32	453	(934)	1271164
209	35.1	11.2	1.3	chr15	26235811	26235963	(75755226)	+	L2	LINE/L2	2720	2889	(530)	1271207
34	3.0	0.0	0.0	chr15	26864503	26864536	(75126653)	+	(AC)n	Simple_repeat	1	34	(0)	1272013
1638	16.7	1.6	6.0	chr15	26864537	26864689	(75126500)	+	L1MA9	LINE/L1	5781	5925	(387)	1272012
31	16.7	2.2	5.4	chr15	29822508	29822597	(72168592)	+	(GGCGG)n	Simple_repeat	1	92	(0)	1276071
1410	24.2	11.7	8.4	chr15	29985339	29986040	(72005149)	+	LTR41B	LTR/ERVL	7	766	(2)	1276342
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
57	26.4	3.9	2.5	chr15	31216151	31216379	(70774810)	+	GA-rich	Low_complexity	1	238	(0)	1278289
354	15.6	15.1	4.3	chr15	34038262	34038355	(67952834)	C	L2a	LINE/L2	(0)	3426	3321	1282164
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
192	30.7	1.1	5.4	chr15	34988699	34988791	(67002398)	+	MIR	SINE/MIR	3	91	(171)	1283722
509	22.9	8.6	6.1	chr15	34988921	34989101	(67002088)	C	MIR	SINE/MIR	(64)	198	13	1283723
402	28.6	7.5	0.6	chr15	35545733	35545894	(66445295)	+	MER5B	DNA/hAT-Charlie	2	175	(3)	1284508
29	28.7	3.3	1.6	chr15	37098981	37099101	(64892088)	+	(GGC)n	Simple_repeat	1	125	(0)	1286504
13	15.0	3.3	0.0	chr15	37099077	37099106	(64892083)	+	(GCA)n	Simple_repeat	1	31	(0)	1286505
20	10.1	3.1	0.0	chr15	37099168	37099199	(64891990)	+	(CA)n	Simple_repeat	1	33	(0)	1286506
26	8.2	0.0	0.0	chr15	37099244	37099282	(64891907)	+	(ACACGCAC)n	Simple_repeat	1	39	(0)	1286507
18	25.2	0.0	0.0	chr15	38058966	38059008	(63932181)	+	(CA)n	Simple_repeat	1	43	(0)	1287679
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
12	20.8	0.0	2.9	chr15	38252257	38252291	(63738898)	+	(GGC)n	Simple_repeat	1	35	(0)	1288014
20	17.4	0.0	4.1	chr15	40108775	40108847	(61882342)	+	(GGC)n	Simple_repeat	1	70	(0)	1290689
61	28.6	0.6	0.6	chr15	40112897	40113069	(61878120)	+	(GTGT)n	Simple_repeat	1	174	(0)	1290695
15	0.0	0.0	0.0	chr15	40113100	40113116	(61878073)	+	(GT)n	Simple_repeat	1	17	(0)	1290696
19	19.1	5.8	2.7	chr15	40405829	40405897	(61585292)	+	(TGGCGGC)n	Simple_repeat	1	73	(0)	1291144
338	31.5	3.9	1.2	chr15	40434958	40435119	(61556070)	+	MIR	SINE/MIR	40	200	(62)	1291191
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
16	16.4	0.0	0.0	chr15	40874076	40874109	(61117080)	+	G-rich	Low_complexity	1	34	(0)	1292108
144	22.5	0.0	0.0	chr15	40914088	40914391	(61076798)	+	(TG)n	Simple_repeat	1	304	(0)	1292195
345	25.7	10.4	3.4	chr15	40914563	40914754	(61076435)	C	MIRc	SINE/MIR	(62)	206	2	1292196
11	23.2	1.6	7.7	chr15	40925943	40926006	(61065183)	+	(CCAGGCC)n	Simple_repeat	1	65	(0)	1292209
2566	6.3	0.0	0.0	chr15	41402729	41403029	(60588160)	C	AluSg	SINE/Alu	(9)	301	1	1293269
17	22.9	4.3	2.7	chr15	41494396	41494465	(60496724)	+	G-rich	Low_complexity	1	73	(0)	1293496
190	36.2	3.7	2.3	chr15	41560239	41560371	(60430818)	C	MIR3	SINE/MIR	(73)	135	1	1293648
43	2.5	0.0	0.0	chr15	41560389	41560429	(60430760)	+	(GT)n	Simple_repeat	1	41	(0)	1293649
16	7.8	0.0	0.0	chr15	41560430	41560454	(60430735)	+	(GCGC)n	Simple_repeat	3	27	(0)	1293650
19	15.8	0.0	4.3	chr15	41882218	41882263	(60108926)	+	(CCCCG)n	Simple_repeat	1	46	(0)	1294184
82	44.1	0.4	0.2	chr15	42154938	42155435	(59835754)	+	(CA)n	Simple_repeat	1	500	(0)	1294648
530	22.4	15.3	1.4	chr15	43133302	43133514	(58857675)	C	MIRc	SINE/MIR	(17)	251	4	1296446
12	31.9	0.0	0.0	chr15	43133656	43133702	(58857487)	+	(GGCCCC)n	Simple_repeat	1	47	(0)	1296447
14	23.4	3.4	3.3	chr15	43133895	43133953	(58857236)	+	(GCCCGC)n	Simple_repeat	1	61	(0)	1296448
19	31.9	3.8	0.9	chr15	43746158	43746263	(58244926)	+	(CCCAGC)n	Simple_repeat	1	110	(0)	1297538
15	30.2	0.0	6.6	chr15	43746221	43746311	(58244878)	+	(CCCCGC)n	Simple_repeat	1	91	(0)	1297539
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
15	14.0	4.9	2.3	chr15	47184322	47184362	(54806827)	+	(CCTGCG)n	Simple_repeat	1	43	(0)	1303035
22	11.5	0.0	0.0	chr15	48190842	48190879	(53800310)	+	(TTTGC)n	Simple_repeat	1	38	(0)	1304477
13	20.2	4.3	2.0	chr15	50765626	50765672	(51225517)	+	(CCGGA)n	Simple_repeat	1	49	(0)	1308472
17	26.7	0.0	0.0	chr15	50908730	50908778	(51082411)	+	(GGC)n	Simple_repeat	1	49	(0)	1308765
20	23.2	0.0	7.4	chr15	52790363	52790443	(49200746)	+	(GCC)n	Simple_repeat	1	81	(0)	1311891
16087	19.8	3.2	2.4	chr15	55524461	55527519	(46463670)	C	L1PA15	LINE/L1	(3139)	5002	1912	1315726
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
13	16.7	4.8	2.3	chr15	56918925	56918966	(45072223)	+	G-rich	Low_complexity	1	44	(0)	1317866
12	19.9	0.0	8.3	chr15	58771059	58771106	(43220083)	+	(GCCC)n	Simple_repeat	1	48	(0)	1320768
23	13.3	3.9	1.9	chr15	59689362	59689412	(42301777)	+	(GGC)n	Simple_repeat	1	53	(0)	1322574
25010	5.0	0.2	0.1	chr15	59803403	59809494	(42181695)	+	L1PA4	LINE/L1	52	6154	(1)	1322780
290	29.7	2.8	8.6	chr15	60396904	60397054	(41594135)	C	MIRc	SINE/MIR	(1)	267	126	1323704
61	0.0	0.0	0.0	chr15	60398784	60398835	(41592354)	+	(GT)n	Simple_repeat	1	52	(0)	1323707
41	2.4	2.3	0.0	chr15	60398892	60398934	(41592255)	+	(GT)n	Simple_repeat	1	44	(0)	1323707
21921	11.4	1.5	0.9	chr15	61359173	61365571	(40625618)	C	L1PA8A	LINE/L1	(0)	6446	1	1325199
3339	6.4	5.2	1.4	chr15	62295199	62295643	(39695546)	C	LTR2	LTR/ERV1	(0)	463	1	1326644
248	28.1	12.9	0.8	chr15	63503663	63503784	(38487405)	+	MIRb	SINE/MIR	123	261	(7)	1328721
14	16.8	4.7	2.2	chr15	63870827	63870869	(38120320)	+	(CTCAGAG)n	Simple_repeat	1	45	(0)	1329297
348	25.9	13.5	2.5	chr15	63870875	63871033	(38120156)	C	MIRc	SINE/MIR	(25)	183	6	1329298
1529	16.7	6.7	6.4	chr15	64161741	64161868	(37829321)	C	AluJo	SINE/Alu	(190)	122	1	1329873
290	19.2	2.5	8.2	chr15	64162270	64162354	(37828835)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	87	1329875
16	17.0	3.4	4.9	chr15	64460651	64460687	(37530502)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1330440
28	3.3	0.0	0.0	chr15	64460688	64460718	(37530471)	+	(GAGCCG)n	Simple_repeat	1	31	(0)	1330441
16	17.0	3.4	4.9	chr15	64460719	64460739	(37530450)	+	(GGCGG)n	Simple_repeat	5	27	(0)	1330442
2443	7.4	0.3	0.0	chr15	64808419	64808715	(37182474)	+	AluSp	SINE/Alu	1	298	(15)	1331253
374	31.7	3.1	0.8	chr15	64809134	64809257	(37181932)	C	MIR	SINE/MIR	(113)	149	23	1331254
364	25.8	3.1	1.0	chr15	64893589	64893726	(37097463)	+	MIRc	SINE/MIR	60	209	(59)	1331449
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
223	20.0	9.1	0.0	chr15	65952713	65952772	(36038417)	C	MIRc	SINE/MIR	(92)	170	105	1333685
1436	13.6	6.6	9.0	chr15	66356914	66357223	(35633966)	C	AluJb	SINE/Alu	(9)	303	2	1334510
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
21	18.4	0.0	0.0	chr15	66701954	66701991	(35289198)	+	(TG)n	Simple_repeat	1	38	(0)	1335297
19	10.8	0.0	0.0	chr15	66703331	66703361	(35287828)	+	(GGC)n	Simple_repeat	1	31	(0)	1335300
242	34.2	6.9	1.5	chr15	67030345	67030549	(34960640)	+	MamRep434	DNA/TcMar-Tigger	181	397	(29)	1335927
35	5.3	0.0	0.0	chr15	67030623	67030661	(34960528)	+	(TG)n	Simple_repeat	1	39	(0)	1335928
400	27.1	17.9	1.5	chr15	67030741	67030875	(34960314)	C	MIRb	SINE/MIR	(71)	197	36	1335929
15	27.0	3.2	5.2	chr15	67033840	67033932	(34957257)	+	(GCCCACC)n	Simple_repeat	1	96	(0)	1335936
281	31.0	5.0	2.8	chr15	68256802	68256977	(33734212)	+	MER45C	DNA/hAT-Tip100	261	440	(513)	1338010
863	14.6	16.6	1.4	chr15	68257405	68257613	(33733576)	+	MER45B	DNA/hAT-Tip100	794	1040	(0)	1338011
1222	22.2	11.3	0.6	chr15	68559886	68560225	(33430964)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	42	1338559
13	23.2	2.1	2.1	chr15	68579336	68579382	(33411807)	+	G-rich	Low_complexity	1	48	(0)	1338606
17	14.7	5.2	4.9	chr15	68820186	68820243	(33170946)	+	GA-rich	Low_complexity	1	61	(0)	1339121
18	0.0	0.0	0.0	chr15	68820633	68820652	(33170537)	+	(CA)n	Simple_repeat	1	20	(0)	1339122
620	28.4	4.0	14.0	chr15	69073274	69073805	(32917384)	+	L1ME3G	LINE/L1	438	909	(15)	1339570
1233	15.2	0.0	2.1	chr15	69089080	69089270	(32901919)	+	AluJb	SINE/Alu	126	312	(0)	1339600
337	34.2	0.8	0.0	chr15	69089498	69089617	(32901572)	C	MIR	SINE/MIR	(0)	262	142	1339601
342	31.8	5.9	8.6	chr15	69089837	69090035	(32901154)	C	MamGypLTR1b	LTR/Gypsy	(114)	668	466	1339602
41	2.5	0.0	0.0	chr15	69090036	69090075	(32901114)	+	(GT)n	Simple_repeat	1	40	(0)	1339603
342	31.8	5.9	8.6	chr15	69090076	69090188	(32901001)	C	MamGypLTR1b	LTR/Gypsy	(317)	465	365	1339602
307	24.4	6.2	6.9	chr15	69090208	69090352	(32900837)	C	MamGypLTR1b	LTR/Gypsy	(480)	302	159	1339602
41	37.3	0.9	1.4	chr15	69990927	69991144	(32000045)	+	(GTGT)n	Simple_repeat	1	220	(0)	1341274
20	22.3	3.5	4.5	chr15	69991062	69991146	(32000043)	+	(TGTGCG)n	Simple_repeat	1	88	(0)	1341275
26	6.3	0.0	0.0	chr15	69991168	69991201	(31999988)	+	(CCCT)n	Simple_repeat	1	34	(0)	1341276
450	25.5	13.8	0.5	chr15	70140939	70141127	(31850062)	C	MIRb	SINE/MIR	(25)	243	26	1341550
513	29.6	3.8	4.2	chr15	70632098	70632309	(31358880)	+	LTR16C	LTR/ERVL	140	350	(139)	1342506
246	29.3	1.3	1.3	chr15	71202809	71202884	(30788305)	+	MIRb	SINE/MIR	35	110	(158)	1343349
362	28.5	7.1	2.4	chr15	71202894	71203079	(30788110)	C	L2c	LINE/L2	(39)	3336	3138	1343350
197	32.4	3.0	7.1	chr15	71203158	71203372	(30787817)	C	L2c	LINE/L2	(418)	3001	2790	1343350
1051	20.9	4.5	0.5	chr15	71363131	71363341	(30627848)	C	MER58A	DNA/hAT-Charlie	(0)	224	5	1343619
16	21.8	0.0	0.0	chr15	71363421	71363453	(30627736)	+	(GT)n	Simple_repeat	1	33	(0)	1343620
1250	19.7	11.7	4.8	chr15	71363554	71363926	(30627263)	C	LTR37A	LTR/ERV1	(0)	426	25	1343621
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
210	36.4	4.8	0.0	chr15	72376328	72376445	(29614744)	C	L2c	LINE/L2	(233)	3154	3031	1345344
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
25	27.0	1.0	4.0	chr15	72474642	72474752	(29516437)	+	(GGACGA)n	Simple_repeat	1	107	(0)	1345548
537	27.2	9.6	0.5	chr15	73347124	73347324	(28643865)	C	MIRb	SINE/MIR	(21)	241	20	1346980
13	19.7	4.0	3.9	chr15	73633748	73633797	(28357392)	+	(CCTCCTT)n	Simple_repeat	1	52	(0)	1347428
16	23.9	0.0	0.0	chr15	74130202	74130236	(27860953)	+	G-rich	Low_complexity	1	35	(0)	1348311
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
2305	9.2	1.0	0.3	chr15	74366278	74366455	(27624734)	C	AluSq	SINE/Alu	(8)	305	129	1348709
2212	6.3	4.7	0.7	chr15	74759964	74760249	(27230940)	C	AluY	SINE/Alu	(13)	298	1	1349461
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
184	33.3	0.0	6.0	chr15	74890362	74890428	(27100761)	C	L2	LINE/L2	(3334)	85	23	1349710
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
248	17.6	3.8	0.0	chr15	74995227	74995277	(26995912)	C	MIRc	SINE/MIR	(97)	171	119	1349978
16	8.2	0.0	0.0	chr15	74995619	74995644	(26995545)	+	(GCAGC)n	Simple_repeat	1	26	(0)	1349979
16	23.9	0.0	0.0	chr15	75201839	75201873	(26789316)	+	(C)n	Simple_repeat	1	35	(0)	1350396
20	13.2	0.0	4.4	chr15	75201874	75201881	(26789308)	+	(CGCCC)n	Simple_repeat	3	45	(0)	1350397
14	27.3	3.5	0.0	chr15	75578551	75578607	(26412582)	+	G-rich	Low_complexity	1	59	(0)	1351122
17	26.4	0.0	0.0	chr15	75647818	75647867	(26343322)	+	(CTCCTCC)n	Simple_repeat	1	50	(0)	1351301
344	25.2	7.3	0.9	chr15	75732609	75732724	(26258465)	C	MIRb	SINE/MIR	(136)	132	9	1351424
311	22.3	5.3	0.8	chr15	75732731	75732866	(26258323)	+	MIRb	SINE/MIR	77	219	(49)	1351425
206	23.7	16.2	5.8	chr15	75733044	75733164	(26258025)	C	MIR3	SINE/MIR	(17)	191	56	1351426
1670	15.3	0.0	1.5	chr15	75758854	75759114	(26232075)	+	AluJb	SINE/Alu	42	298	(14)	1351474
18	4.0	0.0	0.0	chr15	75844189	75844214	(26146975)	+	(CGGGG)n	Simple_repeat	1	26	(0)	1351620
1748	15.2	4.4	0.0	chr15	75903475	75903756	(26087433)	+	AluJb	SINE/Alu	2	296	(16)	1351719
406	28.5	3.6	12.3	chr15	76311786	76311932	(25679257)	+	L2b	LINE/L2	3164	3311	(76)	1352366
2547	7.1	0.0	0.0	chr15	76334833	76335142	(25656047)	+	AluSg	SINE/Alu	1	310	(0)	1352417
11	24.5	2.2	2.2	chr15	76335297	76335341	(25655848)	+	(GGCCTC)n	Simple_repeat	1	46	(0)	1352418
13	17.6	0.0	2.9	chr15	76338004	76338037	(25653152)	+	G-rich	Low_complexity	1	34	(0)	1352424
65	1.7	0.0	0.0	chr15	77604625	77604684	(24386505)	+	(GT)n	Simple_repeat	1	60	(0)	1354338
254	16.7	0.0	9.1	chr15	77623397	77623462	(24367727)	C	MamTip2	DNA/hAT-Tip100	(30)	275	216	1354365
14	22.2	2.3	2.2	chr15	77623661	77623704	(24367485)	+	(TCC)n	Simple_repeat	1	45	(0)	1354366
204	14.8	3.9	1.8	chr15	77623826	77624257	(24366932)	+	(GT)n	Simple_repeat	1	449	(0)	1354367
344	33.2	1.7	0.9	chr15	77702489	77702622	(24288567)	C	MIRb	SINE/MIR	(18)	250	116	1354500
16	28.6	1.3	3.9	chr15	78131451	78131527	(23859662)	+	(GGCACCC)n	Simple_repeat	1	78	(0)	1355268
184	30.4	8.2	0.7	chr15	78131757	78131902	(23859287)	+	MIR3	SINE/MIR	25	182	(26)	1355269
244	27.4	1.4	1.4	chr15	78299932	78300005	(23691184)	+	Charlie9	DNA/hAT-Charlie	4	77	(2680)	1355596
14	17.3	5.1	0.0	chr15	79311269	79311280	(22679909)	+	(GCTCCT)n	Simple_repeat	1	38	(0)	1357652
15	8.9	0.0	0.0	chr15	79311281	79311304	(22679885)	+	(TGC)n	Simple_repeat	1	24	(0)	1357653
16	4.5	0.0	0.0	chr15	80989715	80989737	(21001452)	+	(AGC)n	Simple_repeat	1	23	(0)	1360490
22	21.1	0.0	0.0	chr15	82043346	82043394	(19947795)	+	GA-rich	Low_complexity	1	49	(0)	1362231
20	22.2	0.0	0.0	chr15	82043647	82043693	(19947496)	+	GA-rich	Low_complexity	1	47	(0)	1362232
12	4.2	0.0	10.0	chr15	82047140	82047169	(19944020)	+	(CGCCC)n	Simple_repeat	1	30	(0)	1362238
285	24.9	6.8	7.3	chr15	82047615	82047816	(19943373)	+	MIR	SINE/MIR	12	220	(42)	1362239
17	17.6	1.7	6.7	chr15	82709459	82709517	(19281672)	+	G-rich	Low_complexity	1	60	(0)	1363302
311	33.6	11.0	6.0	chr15	82985327	82985741	(19005448)	C	L2	LINE/L2	(623)	2796	2359	1363815
341	14.3	0.0	1.8	chr15	83067477	83067533	(18923656)	C	MER5A	DNA/hAT-Charlie	(75)	114	59	1363979
275	28.4	4.1	0.0	chr15	84601379	84601494	(17389695)	C	MIR3	SINE/MIR	(29)	179	59	1366244
233	22.9	1.6	0.0	chr15	84980664	84980724	(17010465)	C	MIR3	SINE/MIR	(77)	131	70	1367055
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
325	20.0	2.8	0.0	chr15	88613150	88613219	(13377970)	+	MIRb	SINE/MIR	55	126	(142)	1372681
689	31.2	0.0	0.0	chr15	88613645	88613817	(13377372)	+	MIRb	SINE/MIR	18	190	(78)	1372682
14	11.6	0.0	3.3	chr15	88901499	88901528	(13089661)	+	(CCCAC)n	Simple_repeat	1	30	(0)	1373219
189	28.0	10.7	3.9	chr15	89243463	89243540	(12747649)	C	L2b	LINE/L2	(5)	3370	3287	1373895
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
185	17.6	0.0	0.0	chr15	89416224	89416257	(12574932)	+	L2b	LINE/L2	3339	3372	(3)	1374164
523	31.5	7.4	3.5	chr15	89419701	89419960	(12571229)	+	L2	LINE/L2	2686	2956	(463)	1374169
65	0.0	0.0	0.0	chr15	89470497	89470551	(12520638)	+	(GT)n	Simple_repeat	1	55	(0)	1374261
310	31.5	18.9	0.5	chr15	89470719	89470938	(12520251)	+	L2b	LINE/L2	3012	3281	(94)	1374262
482	21.6	0.0	0.0	chr15	90059350	90059460	(11931729)	+	MIR3	SINE/MIR	30	140	(68)	1375514
249	28.8	1.5	2.9	chr15	90152146	90152281	(11838908)	+	L1ME4a	LINE/L1	5990	6123	(1)	1375749
777	31.7	18.7	0.4	chr15	90152531	90153049	(11838140)	+	L3	LINE/CR1	2509	3144	(955)	1375750
225	25.6	8.8	0.8	chr15	90388822	90388917	(11602272)	+	MIR3	SINE/MIR	45	140	(128)	1376269
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
199	31.2	1.4	0.5	chr15	90956572	90956660	(11034529)	C	MIRc	SINE/MIR	(92)	170	83	1377409
15	15.4	0.0	5.0	chr15	90957491	90957530	(11033659)	+	G-rich	Low_complexity	1	40	(0)	1377410
12	15.5	3.5	0.0	chr15	90957712	90957740	(11033449)	+	(TGAG)n	Simple_repeat	1	30	(0)	1377411
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
298	26.4	1.1	6.2	chr15	92655988	92656084	(9335105)	C	MIRb	SINE/MIR	(41)	227	136	1380170
13	23.2	0.0	2.4	chr15	92714586	92714627	(9276562)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	1380277
347	33.3	12.9	2.1	chr15	93241982	93242580	(8748609)	C	L2a	LINE/L2	(217)	3158	2485	1381273
33	0.0	0.0	0.0	chr15	93242625	93242652	(8748537)	+	(TG)n	Simple_repeat	1	28	(0)	1381276
30	0.0	0.0	0.0	chr15	93242745	93242770	(8748419)	+	(TG)n	Simple_repeat	1	26	(0)	1381277
365	25.6	2.4	2.4	chr15	93477193	93477316	(8513873)	C	L2b	LINE/L2	(1)	3374	3251	1381713
12	5.6	0.0	0.0	chr15	96332314	96332332	(5658857)	+	(AGC)n	Simple_repeat	1	19	(0)	1385733
302	36.6	4.3	8.3	chr15	98256798	98257062	(3734127)	+	L2b	LINE/L2	3122	3375	(0)	1388336
3883	14.3	1.3	0.8	chr15	99601993	99602660	(2388529)	C	MER50	LTR/ERV1	(10)	724	53	1390351
70	14.8	1.5	1.5	chr15	99602661	99602791	(2388398)	+	(TG)n	Simple_repeat	1	133	(0)	1390352
347	13.1	0.0	4.7	chr15	99602792	99602855	(2388334)	C	MER50	LTR/ERV1	(673)	61	1	1390351
558	25.3	5.9	1.3	chr15	99602856	99603083	(2388106)	C	L1MD	LINE/L1	(2650)	3496	3258	1390353
192	22.0	0.0	0.5	chr15	100786121	100786528	(1204661)	+	(TG)n	Simple_repeat	1	408	(0)	1391945
12	4.7	0.0	7.7	chr15	100919285	100919310	(1071879)	+	(CGCC)n	Simple_repeat	1	26	(0)	1392089
12	16.3	7.0	2.2	chr15	100973625	100973667	(1017522)	+	G-rich	Low_complexity	1	46	(0)	1392173
28	21.0	0.0	1.6	chr15	101616709	101616770	(374419)	+	(GT)n	Simple_repeat	1	62	(0)	1393020
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
325	30.8	4.4	2.3	chr16	229684	229816	(90108529)	+	MIR	SINE/MIR	56	191	(71)	1394420
13	17.6	4.0	5.8	chr16	275600	275649	(90062696)	+	(GCG)n	Simple_repeat	1	52	(0)	1394509
348	30.0	10.8	2.8	chr16	383571	383824	(89954521)	+	L1ME4b	LINE/L1	572	848	(44)	1394654
12	18.3	5.4	0.0	chr16	384109	384145	(89954200)	+	(GCACCCA)n	Simple_repeat	1	39	(0)	1394655
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
45	18.1	1.8	3.5	chr16	695289	695402	(89642943)	+	(CCCGC)n	Simple_repeat	1	116	(0)	1395085
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
13	18.2	0.0	0.0	chr16	727578	727608	(89610737)	+	(CGTGGC)n	Simple_repeat	1	31	(0)	1395120
13	7.2	3.0	5.9	chr16	1379919	1379951	(88958394)	+	(CCTGCA)n	Simple_repeat	1	34	(0)	1395812
12	18.6	6.7	2.1	chr16	1474877	1474921	(88863424)	+	(CCG)n	Simple_repeat	1	48	(0)	1395967
50	17.7	2.5	7.2	chr16	1493590	1493608	(88844737)	+	G-rich	Low_complexity	1	24	(131)	1396009
22	8.0	0.0	6.5	chr16	1493609	1493654	(88844691)	+	(GGGTCGG)n	Simple_repeat	1	46	(0)	1396010
50	17.7	2.5	7.2	chr16	1493655	1493752	(88844593)	+	G-rich	Low_complexity	25	155	(0)	1396009
2471	8.1	0.3	0.0	chr16	1611534	1611840	(88726505)	+	AluSz	SINE/Alu	2	309	(3)	1396169
35	23.7	3.6	3.5	chr16	1763788	1763924	(88574421)	+	G-rich	Low_complexity	1	142	(0)	1396368
12	15.9	6.5	4.1	chr16	1979375	1979420	(88358925)	+	(GCCCC)n	Simple_repeat	1	49	(0)	1396741
28	34.0	1.5	0.8	chr16	1983983	1984112	(88354233)	+	(CCGGCC)n	Simple_repeat	1	132	(0)	1396745
11	9.5	11.8	0.0	chr16	1992691	1992724	(88345621)	+	(GCGCACG)n	Simple_repeat	1	38	(0)	1396754
660	16.7	1.8	0.0	chr16	2151107	2151214	(88187131)	C	AluJo	SINE/Alu	(11)	301	192	1396962
31	32.7	0.0	1.6	chr16	2178771	2178895	(88159450)	+	(AGCCC)n	Simple_repeat	1	125	(0)	1396987
36	0.0	8.5	0.0	chr16	2179022	2179068	(88159277)	+	(GGC)n	Simple_repeat	1	51	(0)	1396988
13	27.1	0.0	2.1	chr16	2205516	2205562	(88132783)	+	G-rich	Low_complexity	1	47	(0)	1397037
278	34.4	2.1	0.0	chr16	2211181	2211273	(88127072)	+	L2b	LINE/L2	3279	3373	(2)	1397041
235	17.4	9.2	1.4	chr16	2215546	2215615	(88122730)	C	L1ME3	LINE/L1	(3)	6159	6084	1397045
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
26	0.0	0.0	0.0	chr16	2520252	2520276	(87818069)	+	(GGGC)n	Simple_repeat	1	25	(0)	1397563
13	11.1	9.3	5.1	chr16	2752706	2752759	(87585586)	+	(GAGGC)n	Simple_repeat	1	59	(0)	1397879
2030	18.4	0.5	4.5	chr16	2868695	2868829	(87469516)	+	MER63B	DNA/hAT-Blackjack	33	151	(285)	1398064
714	17.0	15.2	0.7	chr16	2981043	2981183	(87357162)	C	AluSx	SINE/Alu	(15)	297	133	1398284
2036	13.7	0.0	0.3	chr16	2981187	2981478	(87356867)	C	AluSz	SINE/Alu	(21)	291	1	1398285
12	9.1	4.2	0.0	chr16	3021857	3021880	(87316465)	+	(CATT)n	Simple_repeat	1	25	(0)	1398345
13	24.8	4.2	0.0	chr16	3023699	3023746	(87314599)	+	(CCCCAG)n	Simple_repeat	1	50	(0)	1398347
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
204	27.6	11.5	4.7	chr16	3283093	3283221	(87055124)	+	MER5B	DNA/hAT-Charlie	30	168	(10)	1398902
2481	6.9	0.3	0.3	chr16	3500367	3500670	(86837675)	C	AluSz	SINE/Alu	(8)	304	1	1399285
220	32.1	8.7	0.0	chr16	3500675	3500758	(86837587)	+	MIR	SINE/MIR	152	243	(19)	1399286
495	20.8	15.9	0.6	chr16	3501279	3501438	(86836907)	+	MER3	DNA/hAT-Charlie	20	208	(1)	1399287
297	28.0	4.1	0.0	chr16	3716864	3716956	(86621389)	+	L2a	LINE/L2	3330	3426	(0)	1399695
273	29.6	4.6	0.0	chr16	3881294	3881385	(86456960)	C	MIR	SINE/MIR	(126)	142	47	1399968
189	22.0	0.0	3.9	chr16	4271706	4271757	(86066588)	+	AmnSINE1	SINE/5S-Deu-L2	76	125	(450)	1400801
17	16.1	0.0	6.4	chr16	4272869	4272915	(86065430)	+	(GGC)n	Simple_repeat	1	47	(0)	1400803
60	1.8	0.0	0.0	chr16	4272948	4273003	(86065342)	+	(GT)n	Simple_repeat	1	56	(0)	1400804
19	30.2	0.0	6.4	chr16	4273125	4273233	(86065112)	+	G-rich	Low_complexity	1	109	(0)	1400805
13	21.9	2.3	2.2	chr16	4476448	4476491	(85861854)	+	(GACAGGC)n	Simple_repeat	1	45	(0)	1401226
25	34.4	0.0	0.0	chr16	4958577	4958656	(85379689)	+	(TG)n	Simple_repeat	1	80	(0)	1402242
1014	26.2	9.4	2.2	chr16	5034049	5034500	(85303845)	C	L1MC4	LINE/L1	(0)	8042	7555	1402426
21	12.2	2.1	4.1	chr16	5071862	5071909	(85266436)	+	(TGC)n	Simple_repeat	1	49	(0)	1402509
736	12.3	8.3	0.0	chr16	9090869	9090990	(81247355)	+	FLAM_C	SINE/Alu	1	133	(10)	1410573
28	18.4	0.0	0.0	chr16	10181188	10181238	(80157107)	+	(CA)n	Simple_repeat	1	51	(0)	1412842
21	30.8	0.0	0.0	chr16	11742653	11742720	(78595625)	+	(GCC)n	Simple_repeat	1	68	(0)	1416395
23	17.5	6.9	0.0	chr16	11797030	11797087	(78541258)	+	(CG)n	Simple_repeat	1	62	(0)	1416500
36	25.6	1.2	7.0	chr16	11797137	11797305	(78541040)	+	(GCG)n	Simple_repeat	1	171	(0)	1416501
13	19.8	6.3	4.5	chr16	12901422	12901484	(77436861)	+	(GCTC)n	Simple_repeat	1	67	(0)	1418920
24	24.0	1.0	6.0	chr16	12901496	12901595	(77436750)	+	(TCCCCC)n	Simple_repeat	1	95	(0)	1418921
12	22.0	2.7	0.0	chr16	12901803	12901839	(77436506)	+	(CCCGG)n	Simple_repeat	1	38	(0)	1418922
13	19.7	1.6	8.1	chr16	12902636	12902696	(77435649)	+	(CCTCC)n	Simple_repeat	1	62	(0)	1418923
839	12.6	0.0	0.0	chr16	14285249	14285375	(76052970)	C	AluJb	SINE/Alu	(0)	312	186	1421771
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
187	30.8	1.1	4.2	chr16	15601536	15601630	(74736715)	+	L2c	LINE/L2	3034	3125	(262)	1424796
272	27.1	15.0	4.0	chr16	17166314	17166413	(73171932)	+	L2c	LINE/L2	3256	3380	(7)	1428456
197	34.6	0.0	4.9	chr16	17166423	17166504	(73171841)	+	L2b	LINE/L2	3275	3352	(23)	1428457
1864	13.8	3.0	3.4	chr16	17166516	17166812	(73171533)	C	AluSx	SINE/Alu	(16)	296	1	1428458
548	25.3	9.1	0.0	chr16	20682555	20682704	(69655641)	+	MER5A1	DNA/hAT-Charlie	2	166	(0)	1436288
275	31.1	0.0	6.2	chr16	20742076	20742113	(69596232)	+	MLT1N2	LTR/ERVL-MaLR	438	475	(87)	1436389
3805	9.4	7.7	5.1	chr16	20742114	20742375	(69595970)	+	LTR66	LTR/ERVL	1	280	(330)	1436390
14	24.8	0.0	7.6	chr16	21301409	21301474	(69036871)	+	G-rich	Low_complexity	1	66	(0)	1437615
15	12.0	0.0	0.0	chr16	21301852	21301878	(69036467)	+	(GCG)n	Simple_repeat	1	27	(0)	1437616
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
14	25.3	1.6	4.8	chr16	21599902	21599963	(68738382)	+	G-rich	Low_complexity	1	63	(0)	1438247
14	21.5	2.2	2.2	chr16	22206227	22206271	(68132074)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1439529
23	22.6	1.5	1.0	chr16	22436813	22436867	(67901478)	+	A-rich	Low_complexity	1	55	(0)	1440062
12	23.9	0.0	0.0	chr16	22437078	22437112	(67901233)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	1440063
22	24.3	0.0	1.7	chr16	22437242	22437301	(67901044)	+	(TCC)n	Simple_repeat	1	60	(0)	1440064
486	30.6	0.6	4.2	chr16	22948634	22948800	(67389545)	C	MIR	SINE/MIR	(84)	178	18	1441162
29	10.8	0.0	0.0	chr16	22949021	22949070	(67389275)	+	(TTCA)n	Simple_repeat	1	50	(0)	1441163
371	32.2	0.0	0.0	chr16	23026625	23026739	(67311606)	+	MIRb	SINE/MIR	113	227	(41)	1441322
36	0.0	4.9	0.0	chr16	23027135	23027175	(67311170)	+	(TTTCTTTT)n	Simple_repeat	1	43	(0)	1441323
21	20.7	2.5	6.0	chr16	23302350	23302430	(67035915)	+	(GCC)n	Simple_repeat	1	83	(0)	1441939
15	29.0	0.0	4.4	chr16	23510188	23510255	(66828090)	+	(CCCGGC)n	Simple_repeat	1	68	(0)	1442437
23	30.6	1.2	0.0	chr16	23510378	23510461	(66827884)	+	(CCGCCG)n	Simple_repeat	1	85	(0)	1442438
451	8.2	1.4	1.4	chr16	23510637	23510710	(66827635)	C	MER53	DNA/hAT	(0)	193	120	1442439
1294	13.1	0.4	7.8	chr16	23510711	23510906	(66827439)	C	AluJb	SINE/Alu	(16)	296	119	1442440
49	0.0	0.0	0.0	chr16	23510907	23510948	(66827397)	+	(GT)n	Simple_repeat	1	42	(0)	1442441
1294	13.1	0.4	7.8	chr16	23510949	23510995	(66827350)	C	AluJb	SINE/Alu	(194)	118	71	1442440
40	0.0	0.0	0.0	chr16	23511017	23511050	(66827295)	+	(GT)n	Simple_repeat	1	34	(0)	1442442
594	10.0	3.3	1.1	chr16	23511051	23511140	(66827205)	C	AluJb	SINE/Alu	(194)	118	27	1442443
33	9.4	0.0	0.0	chr16	24256300	24256345	(66082000)	+	(CA)n	Simple_repeat	1	46	(0)	1444214
1525	19.3	1.4	3.4	chr16	25746859	25747154	(64591191)	C	AluJr4	SINE/Alu	(22)	290	1	1447627
391	27.3	16.8	0.7	chr16	25747539	25747693	(64590652)	C	MIR	SINE/MIR	(70)	192	8	1447628
374	35.4	0.0	0.0	chr16	25950765	25950891	(64387454)	+	MIRb	SINE/MIR	120	246	(22)	1448032
224	32.9	0.5	0.2	chr16	28501204	28501897	(61836448)	+	(CACACA)n	Simple_repeat	1	695	(0)	1453688
22	0.0	0.0	0.0	chr16	28822936	28822959	(61515386)	+	(C)n	Simple_repeat	1	24	(0)	1454525
11	9.7	8.6	2.6	chr16	28879981	28880015	(61458330)	+	(GCCCCT)n	Simple_repeat	1	38	(0)	1454637
28	0.0	3.3	0.0	chr16	28925338	28925367	(61412978)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	1454764
11	20.8	0.0	2.9	chr16	29679243	29679277	(60659068)	+	(ACCCCT)n	Simple_repeat	1	35	(0)	1456281
23	10.9	0.0	2.4	chr16	29691994	29692035	(60646310)	+	(GTGTGC)n	Simple_repeat	1	42	(0)	1456321
3407	14.2	2.1	1.9	chr16	29709407	29709676	(60628669)	+	HUERS-P3b-int	LTR/ERV1	1	268	(7150)	1456374
3715	5.9	1.6	0.0	chr16	29709677	29710181	(60628164)	C	LTR10D	LTR/ERV1	(0)	513	1	1456375
215	27.7	15.1	1.0	chr16	29791036	29791137	(60547208)	+	MIR1_Amn	SINE/MIR	39	157	(73)	1456580
20	31.1	3.9	0.9	chr16	29812107	29812217	(60526128)	+	G-rich	Low_complexity	1	114	(0)	1456616
14	20.2	0.0	0.0	chr16	29812228	29812261	(60526084)	+	(CCTC)n	Simple_repeat	1	34	(0)	1456617
13	23.5	0.0	0.0	chr16	29900111	29900145	(60438200)	+	(GCCCG)n	Simple_repeat	1	35	(0)	1456817
16	16.9	0.0	0.0	chr16	29900223	29900255	(60438090)	+	(CCGA)n	Simple_repeat	1	33	(0)	1456818
16	21.8	5.0	1.6	chr16	29900306	29900365	(60437980)	+	(CCGCC)n	Simple_repeat	1	63	(0)	1456819
12	25.5	3.8	1.8	chr16	29926074	29926126	(60412219)	+	(GCGCCCT)n	Simple_repeat	1	55	(0)	1456879
18	37.2	0.0	0.0	chr16	30011140	30011212	(60327133)	+	(GC)n	Simple_repeat	1	73	(0)	1457057
15	27.5	0.0	0.0	chr16	30011439	30011488	(60326857)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	1457058
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
22	19.1	0.0	3.5	chr16	30031150	30031206	(60307139)	+	G-rich	Low_complexity	1	57	(0)	1457100
14	16.4	2.2	5.5	chr16	30112812	30112858	(60225487)	+	G-rich	Low_complexity	1	45	(0)	1457286
351	23.1	6.1	0.0	chr16	30112891	30112998	(60225347)	C	MER91C	DNA/hAT-Tip100	(22)	118	4	1457287
24	20.8	0.0	1.8	chr16	30335132	30335188	(60003157)	+	GA-rich	Low_complexity	1	57	(0)	1457788
16	19.9	0.0	0.0	chr16	30335313	30335347	(60002998)	+	GA-rich	Low_complexity	1	35	(0)	1457789
254	16.3	0.0	0.0	chr16	30525987	30526029	(59812316)	C	HERVIP10FH-int	LTR/ERV1	(2377)	2725	2683	1458284
13	25.3	2.0	2.0	chr16	30585555	30585603	(59752742)	+	G-rich	Low_complexity	1	50	(0)	1458400
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
15	7.3	3.2	3.1	chr16	30787523	30787553	(59550792)	+	(GGGCTG)n	Simple_repeat	1	32	(0)	1458842
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
1843	24.7	7.0	1.1	chr16	30894574	30895183	(59443162)	+	L1ME3A	LINE/L1	5456	6103	(70)	1459125
12	14.1	3.5	10.0	chr16	31117897	31117954	(59220391)	+	G-rich	Low_complexity	1	60	(0)	1459640
15	18.7	4.3	4.2	chr16	31142906	31142951	(59195394)	+	(GC)n	Simple_repeat	1	48	(0)	1459691
20	8.9	2.8	0.0	chr16	31202044	31202079	(59136266)	+	(TGCCC)n	Simple_repeat	1	37	(0)	1459827
204	29.3	10.8	5.2	chr16	46690234	46690424	(43647921)	C	L2b	LINE/L2	(237)	3138	2936	1465821
13	25.7	2.1	2.0	chr16	46973349	46973396	(43364949)	+	(CCG)n	Simple_repeat	1	49	(0)	1466442
276	18.3	11.2	2.7	chr16	48366161	48366233	(41972112)	C	MADE2	DNA/TcMar-Mariner	(0)	80	1	1468610
254	24.5	0.0	0.0	chr16	48609285	48609337	(41729008)	+	Charlie4z	DNA/hAT-Charlie	110	162	(5)	1469087
484	28.1	8.4	1.0	chr16	48609477	48609674	(41728671)	C	MIR	SINE/MIR	(33)	229	16	1469088
12	22.8	5.0	6.0	chr16	48609688	48609767	(41728578)	+	G-rich	Low_complexity	1	84	(0)	1469089
3938	15.1	2.9	0.2	chr16	48930004	48930638	(41407707)	C	MER6	DNA/TcMar-Tigger	(0)	865	213	1469686
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
14	17.0	0.0	2.9	chr16	49280378	49280412	(41057933)	+	(CCCT)n	Simple_repeat	1	35	(0)	1470269
33	2.7	0.0	2.5	chr16	49492462	49492501	(40845844)	+	(CCGGGG)n	Simple_repeat	1	40	(0)	1470615
16	6.8	6.5	0.0	chr16	50065936	50065967	(40272378)	+	(CCCCGA)n	Simple_repeat	1	34	(0)	1471725
13	26.4	3.2	3.1	chr16	50066194	50066255	(40272090)	+	(GGC)n	Simple_repeat	1	64	(0)	1471726
18	12.2	0.0	0.0	chr16	51359056	51359082	(38979263)	+	(AG)n	Simple_repeat	1	27	(0)	1474210
668	30.2	5.0	0.0	chr16	54331637	54331828	(36006517)	+	MIR	SINE/MIR	58	259	(3)	1479328
257	25.8	11.7	0.7	chr16	56590036	56590187	(33748158)	+	MER5B	DNA/hAT-Charlie	3	173	(5)	1483364
13	4.1	8.0	0.0	chr16	56657639	56657663	(33680682)	+	(CGGGG)n	Simple_repeat	1	27	(0)	1483499
15	3.8	0.0	9.1	chr16	56730007	56730039	(33608306)	+	(GCCCC)n	Simple_repeat	1	33	(0)	1483652
17	29.4	0.0	3.0	chr16	57284711	57284776	(33053569)	+	(CCG)n	Simple_repeat	1	66	(0)	1484720
625	8.4	0.0	0.0	chr16	57299951	57300033	(33038312)	+	tRNA-Leu-CTG	tRNA	1	83	(3)	1484766
358	19.7	10.2	0.8	chr16	57300190	57300285	(33038060)	+	AluJb	SINE/Alu	209	293	(9)	1484767
387	28.4	16.6	1.0	chr16	57462315	57462527	(32875818)	C	L1ME3G	LINE/L1	(344)	580	317	1485115
12	12.0	3.7	0.0	chr16	57536735	57536761	(32801584)	+	G-rich	Low_complexity	1	28	(0)	1485265
231	29.4	7.7	0.7	chr16	57536977	57537089	(32801256)	+	MIR3	SINE/MIR	62	186	(82)	1485266
133	13.0	2.3	2.9	chr16	57628843	57629108	(32709237)	+	(AGTGTG)n	Simple_repeat	1	272	(0)	1485455
178	38.0	0.5	1.7	chr16	57644215	57645077	(32693268)	+	(CA)n	Simple_repeat	1	867	(0)	1485485
16	15.8	2.8	0.0	chr16	57735899	57735934	(32602411)	+	G-rich	Low_complexity	1	37	(0)	1485672
12	23.8	0.0	6.0	chr16	58001348	58001397	(32336948)	+	(CCGCC)n	Simple_repeat	1	50	(0)	1486244
12	23.3	2.5	0.0	chr16	58001525	58001564	(32336781)	+	(CGAGGA)n	Simple_repeat	1	41	(0)	1486245
144	35.0	3.3	2.4	chr16	58087149	58088079	(32250266)	+	(CACATA)n	Simple_repeat	1	962	(0)	1486429
14	12.7	0.0	0.0	chr16	58463496	58463521	(31874824)	+	(CCCG)n	Simple_repeat	1	26	(0)	1487166
671	29.6	2.6	5.0	chr16	65578547	65578784	(24759561)	C	MIRb	SINE/MIR	(31)	237	6	1498197
2853	14.5	3.6	8.4	chr16	65773032	65773253	(24565092)	+	MER34C_	LTR/ERV1	382	585	(0)	1498488
334	25.4	10.0	2.3	chr16	65773255	65773383	(24564962)	C	MIRb	SINE/MIR	(62)	206	67	1498490
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
995	15.6	1.2	1.8	chr16	66553014	66553180	(23785165)	+	FRAM	SINE/Alu	1	166	(10)	1499953
32	32.4	1.4	2.7	chr16	66604020	66604163	(23734182)	+	(TG)n	Simple_repeat	1	146	(0)	1500045
13	15.2	0.0	3.2	chr16	66830711	66830741	(23507604)	+	(CCCGG)n	Simple_repeat	1	31	(0)	1500503
17	8.8	5.3	2.5	chr16	67163444	67163481	(23174864)	+	(CTGGAG)n	Simple_repeat	1	40	(0)	1501203
13	23.1	0.0	9.0	chr16	67174473	67174539	(23163806)	+	(GCAGG)n	Simple_repeat	1	67	(0)	1501216
45	30.6	0.0	0.0	chr16	67174779	67174918	(23163427)	+	(GAGCCA)n	Simple_repeat	1	140	(0)	1501217
12	22.1	2.7	0.0	chr16	67178507	67178543	(23159802)	+	G-rich	Low_complexity	1	38	(0)	1501222
13	21.6	4.7	4.5	chr16	67279303	67279366	(23058979)	+	G-rich	Low_complexity	1	67	(0)	1501369
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
482	27.7	7.6	4.2	chr16	67561309	67561523	(22776822)	+	Charlie8	DNA/hAT-Charlie	1	223	(2205)	1501888
17	20.1	0.0	4.1	chr16	67562048	67562096	(22776249)	+	(GGCCG)n	Simple_repeat	1	49	(0)	1501889
15	27.7	0.0	1.9	chr16	67645066	67645119	(22693226)	+	G-rich	Low_complexity	1	54	(0)	1502107
18	14.8	7.4	1.7	chr16	67652857	67652910	(22685435)	+	(GCG)n	Simple_repeat	1	58	(0)	1502110
80	4.8	0.0	0.0	chr16	67842863	67842950	(22495395)	+	(GCA)n	Simple_repeat	1	88	(0)	1502468
18	13.9	0.0	0.0	chr16	67993133	67993164	(22345181)	+	(AGC)n	Simple_repeat	1	32	(0)	1502700
21	30.9	0.0	4.1	chr16	68235965	68235983	(22102362)	+	G-rich	Low_complexity	1	42	(56)	1503208
21	20.6	3.6	0.0	chr16	68235984	68236039	(22102306)	+	(GCG)n	Simple_repeat	1	58	(0)	1503209
21	30.9	0.0	4.1	chr16	68236040	68236062	(22102283)	+	G-rich	Low_complexity	43	98	(0)	1503208
2248	9.2	0.0	0.0	chr16	68240256	68240568	(22097777)	C	AluSq2	SINE/Alu	(0)	313	1	1503213
12	8.1	3.6	3.5	chr16	68245583	68245610	(22092735)	+	G-rich	Low_complexity	1	29	(0)	1503223
15	27.2	0.0	3.5	chr16	68737345	68737401	(21600944)	+	(CCGGC)n	Simple_repeat	1	57	(0)	1504212
13	0.0	0.0	0.0	chr16	68737445	68737461	(21600884)	+	(GCT)n	Simple_repeat	1	17	(0)	1504213
1016	27.9	7.3	7.8	chr16	68843233	68843428	(21494917)	+	MER20B	DNA/hAT-Charlie	485	686	(97)	1504476
180	26.1	0.0	0.0	chr16	68843925	68843970	(21494375)	C	MIR	SINE/MIR	(1)	261	216	1504478
1715	22.4	13.2	4.4	chr16	71462484	71463159	(18875186)	C	MER20B	DNA/hAT-Charlie	(15)	768	25	1509731
16	0.0	0.0	0.0	chr16	71467961	71467977	(18870368)	+	(G)n	Simple_repeat	1	17	(0)	1509741
2183	10.9	1.0	0.0	chr16	71468075	71468359	(18869986)	C	AluSq2	SINE/Alu	(25)	288	1	1509742
375	30.1	3.1	0.8	chr16	71484168	71484291	(18854054)	+	L2b	LINE/L2	3228	3354	(21)	1509763
11	14.8	4.9	4.7	chr16	74813188	74813228	(15525117)	+	G-rich	Low_complexity	1	43	(0)	1515494
238	24.1	15.3	1.2	chr16	74813497	74813580	(15524765)	C	Charlie4a	DNA/hAT-Charlie	(2)	506	409	1515495
1932	10.0	2.3	10.0	chr16	74864796	74865125	(15473220)	+	AluSx1	SINE/Alu	1	304	(8)	1515614
17	27.5	3.3	0.0	chr16	75265985	75266045	(15072300)	+	(GCC)n	Simple_repeat	1	63	(0)	1516407
362	31.0	16.9	0.8	chr16	75266351	75266597	(15071748)	C	L3	LINE/CR1	(124)	3975	3681	1516408
15719	14.4	3.1	4.0	chr16	75433679	75434907	(14903438)	+	Tigger17	DNA/TcMar-Tigger	1	1199	(1474)	1516787
15	7.8	0.0	3.5	chr16	75516837	75516865	(14821480)	+	(GCCGG)n	Simple_repeat	1	29	(0)	1516961
21	27.4	5.8	2.4	chr16	75566366	75566485	(14771860)	+	(CCGCTG)n	Simple_repeat	1	127	(0)	1517068
260	27.5	19.9	0.0	chr16	77211751	77211939	(13126406)	C	L2a	LINE/L2	(269)	3157	2922	1519451
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
3826	10.9	0.7	3.7	chr16	78448485	78449072	(11889273)	C	LTR73	LTR/ERV1	(2)	570	1	1521746
1774	27.1	5.3	4.7	chr16	78449073	78449431	(11888914)	C	MLT1F2	LTR/ERVL-MaLR	(179)	381	19	1521745
211	35.1	0.0	0.0	chr16	79346985	79347061	(10991284)	+	MIRb	SINE/MIR	40	116	(152)	1523383
204	29.4	0.0	0.0	chr16	79347060	79347110	(10991235)	+	L2b	LINE/L2	3310	3360	(15)	1523384
29	6.2	0.0	0.0	chr16	79601656	79601689	(10736656)	+	(AC)n	Simple_repeat	1	34	(0)	1523839
19	19.2	0.0	0.0	chr16	79770190	79770225	(10568120)	+	(GT)n	Simple_repeat	1	36	(0)	1524121
15	10.0	0.0	0.0	chr16	79770262	79770283	(10568062)	+	(GT)n	Simple_repeat	1	22	(0)	1524121
15	20.7	5.0	3.2	chr16	81315299	81315358	(9022987)	+	G-rich	Low_complexity	1	63	(0)	1527044
2535	7.4	0.0	0.3	chr16	81729850	81730161	(8608184)	C	AluSp	SINE/Alu	(2)	311	1	1527882
184	27.1	13.7	6.1	chr16	81730244	81730357	(8607988)	+	MamTip2	DNA/hAT-Tip100	182	305	(0)	1527883
729	24.3	12.1	0.0	chr16	83701895	83702083	(6636262)	+	MIR	SINE/MIR	48	262	(0)	1531446
308	30.3	1.8	0.0	chr16	83808491	83808599	(6529746)	C	MIR3	SINE/MIR	(50)	158	48	1531629
19	30.4	0.0	0.0	chr16	85183208	85183263	(5155082)	+	(CA)n	Simple_repeat	1	56	(0)	1534342
50	33.5	1.8	1.3	chr16	85245870	85246089	(5092256)	+	(TG)n	Simple_repeat	1	224	(0)	1534483
32	29.7	0.0	0.0	chr16	85583517	85583606	(4754739)	+	(AC)n	Simple_repeat	1	90	(0)	1535100
270	18.2	1.8	0.0	chr16	86074436	86074490	(4263855)	C	L1MB5	LINE/L1	(8)	6166	6111	1535989
342	33.7	7.7	1.1	chr16	86074533	86074715	(4263630)	C	MIRb	SINE/MIR	(19)	249	54	1535990
198	33.3	13.5	2.9	chr16	86241531	86241669	(4096676)	+	MIRc	SINE/MIR	51	206	(62)	1536305
2094	12.0	5.8	4.3	chr16	86277111	86277288	(4061057)	C	THE1D	LTR/ERVL-MaLR	(204)	177	1	1536361
19	27.4	4.2	4.1	chr16	86287144	86287261	(4051084)	+	(CTCTCCC)n	Simple_repeat	1	123	(0)	1536372
77	39.1	1.0	0.7	chr16	86443437	86443848	(3894497)	+	(CA)n	Simple_repeat	1	416	(0)	1536677
12	21.2	2.5	2.4	chr16	86508276	86508315	(3830030)	+	(GGC)n	Simple_repeat	1	41	(0)	1536779
296	14.8	7.1	3.2	chr16	86932146	86932981	(3405364)	+	(AGGTGTG)n	Simple_repeat	1	895	(0)	1537495
103	34.3	0.3	1.0	chr16	87219271	87219659	(3118686)	+	(TG)n	Simple_repeat	1	390	(0)	1538030
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
1573	24.2	4.7	0.5	chr16	87487724	87488151	(2850194)	+	L1MB7	LINE/L1	5733	6179	(5)	1538501
184	30.2	1.6	1.6	chr16	87563647	87563710	(2774635)	C	MIRc	SINE/MIR	(102)	166	103	1538675
252	18.8	0.0	0.0	chr16	87563742	87563789	(2774556)	C	MLT2D	LTR/ERVL	(0)	560	513	1538676
293	31.3	0.7	0.2	chr16	87563796	87564685	(2773660)	+	(GT)n	Simple_repeat	1	896	(0)	1538677
1455	24.8	1.9	1.1	chr16	87564686	87565056	(2773289)	C	MLT2D	LTR/ERVL	(40)	374	1	1538676
236	26.3	5.9	1.0	chr16	87661753	87661848	(2676497)	+	Charlie4a	DNA/hAT-Charlie	26	126	(382)	1538871
454	33.6	3.6	0.0	chr16	87661932	87662148	(2676197)	+	Charlie4a	DNA/hAT-Charlie	246	470	(38)	1538872
340	26.4	7.7	0.7	chr16	87765329	87765473	(2572872)	C	MIRc	SINE/MIR	(111)	157	2	1539012
14	9.7	5.7	2.7	chr16	87765480	87765514	(2572831)	+	GA-rich	Low_complexity	1	37	(0)	1539013
117	38.1	0.6	0.6	chr16	88296342	88296851	(2041494)	+	(AC)n	Simple_repeat	1	513	(0)	1539783
224	26.8	10.9	0.0	chr16	88384133	88384214	(1954131)	C	MIRb	SINE/MIR	(62)	206	115	1539894
397	33.3	4.7	3.8	chr16	88384768	88384976	(1953369)	C	L3	LINE/CR1	(5)	4094	3884	1539895
39	28.2	1.2	4.2	chr16	88534645	88534807	(1803538)	+	(CCGCCC)n	Simple_repeat	1	165	(0)	1540072
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
224	41.8	0.0	0.7	chr16	88561138	88561272	(1777073)	C	MIR	SINE/MIR	(7)	255	122	1540121
186	23.4	0.0	7.8	chr16	88662872	88662922	(1675423)	+	MIR3	SINE/MIR	109	155	(53)	1540287
12	21.7	0.0	4.9	chr16	88662960	88663000	(1675345)	+	(CCCGG)n	Simple_repeat	1	41	(0)	1540288
286	24.2	0.0	0.0	chr16	88812033	88812098	(1526247)	C	Kanga1d	DNA/TcMar-Tc2	(0)	609	544	1540480
2318	7.3	0.0	0.0	chr16	88812736	88813024	(1525321)	C	AluY	SINE/Alu	(22)	289	1	1540481
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
12	30.4	1.2	5.8	chr16	89721182	89721266	(617079)	+	(CCCCCGC)n	Simple_repeat	1	86	(0)	1541726
23	15.9	1.3	7.9	chr16	89721474	89721548	(616797)	+	(CCCGC)n	Simple_repeat	1	76	(0)	1541727
719	11.3	0.9	0.8	chr16	89817057	89817172	(521173)	+	FLAM_C	SINE/Alu	6	117	(16)	1541909
213	29.7	5.1	1.3	chr16	89918431	89918505	(419840)	C	L3	LINE/CR1	(150)	3949	3872	1542082
16	10.0	4.0	7.7	chr16	89923322	89923398	(414947)	+	(GCCC)n	Simple_repeat	1	74	(0)	1542086
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
2321	10.5	0.3	0.0	chr16	89926711	89927016	(411329)	C	AluSq	SINE/Alu	(6)	307	1	1542091
13	23.5	1.8	5.4	chr16	89972927	89972981	(365364)	+	(CCT)n	Simple_repeat	1	56	(0)	1542179
2243	8.8	0.0	2.3	chr16	90082602	90082615	(255730)	C	AluSq	SINE/Alu	(14)	299	287	1542341
31	12.6	0.0	0.0	chr16	90082616	90082669	(255676)	+	(GT)n	Simple_repeat	1	54	(0)	1542342
2243	8.8	0.0	2.3	chr16	90082670	90082959	(255386)	C	AluSq	SINE/Alu	(27)	286	2	1542341
268	35.0	3.9	4.7	chr17	489418	489546	(82767895)	C	L2c	LINE/L2	(159)	3228	3101	1545252
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
167	30.3	0.6	0.6	chr17	812557	813060	(82444381)	+	(GT)n	Simple_repeat	1	507	(0)	1545822
1422	8.4	1.1	0.0	chr17	996145	996347	(82261094)	C	AluSq2	SINE/Alu	(0)	313	104	1546194
517	14.1	0.0	0.0	chr17	996348	996418	(82261023)	C	AluJo	SINE/Alu	(122)	190	120	1546195
971	9.2	0.8	0.0	chr17	996420	996550	(82260891)	C	AluSx3	SINE/Alu	(179)	132	1	1546196
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
2353	7.4	0.0	1.6	chr17	1517247	1517557	(81739884)	+	AluSz	SINE/Alu	1	306	(6)	1547280
943	9.0	0.0	0.0	chr17	1517558	1517679	(81739762)	C	AluSx	SINE/Alu	(190)	122	1	1547281
39	15.8	1.8	6.2	chr17	1649096	1649206	(81608235)	+	(GCCCC)n	Simple_repeat	1	113	(0)	1547528
14	13.4	7.0	2.2	chr17	1724837	1724879	(81532562)	+	(GCCCCA)n	Simple_repeat	1	46	(0)	1547675
644	33.3	14.0	3.8	chr17	1830274	1830765	(81426676)	+	L2a	LINE/L2	1721	2290	(1129)	1547919
30	23.5	4.4	4.3	chr17	2337519	2337653	(80919788)	+	(GGCGGC)n	Simple_repeat	1	141	(0)	1548930
22	25.0	2.2	4.3	chr17	2749665	2749756	(80507685)	+	GA-rich	Low_complexity	1	94	(0)	1549847
341	25.9	10.1	3.0	chr17	2750082	2750266	(80507175)	+	MIR3	SINE/MIR	33	238	(30)	1549848
2356	8.5	0.3	0.3	chr17	2887378	2887672	(80369769)	C	AluSq2	SINE/Alu	(16)	297	3	1550185
2196	12.6	0.3	0.0	chr17	2887673	2887973	(80369468)	C	AluSx	SINE/Alu	(10)	302	1	1550186
763	26.4	4.8	4.0	chr17	3049536	3049784	(80207657)	C	ORSL-2a	DNA/hAT-Tip100	(84)	258	8	1550499
164	18.0	3.1	3.3	chr17	3535129	3535541	(79721900)	+	(CCTTCCT)n	Simple_repeat	1	426	(0)	1551212
259	30.5	13.7	4.0	chr17	3535891	3536191	(79721250)	C	L2b	LINE/L2	(11)	3364	3030	1551213
12	25.7	4.0	5.1	chr17	3892274	3892349	(79365092)	+	(GCACAC)n	Simple_repeat	1	79	(0)	1551949
1151	12.3	0.0	0.0	chr17	4262596	4262750	(78994691)	+	AluJb	SINE/Alu	132	286	(26)	1552642
14	21.1	0.0	2.5	chr17	4366693	4366753	(78890688)	+	(CCCG)n	Simple_repeat	1	59	(0)	1552867
673	27.9	8.7	4.0	chr17	4493106	4493378	(78764063)	C	L2c	LINE/L2	(0)	3387	3101	1553204
475	35.8	9.0	4.9	chr17	4493552	4493706	(78763735)	C	L2c	LINE/L2	(377)	3042	2891	1553204
12	17.7	5.0	2.4	chr17	4584940	4584979	(78672462)	+	(CGCCA)n	Simple_repeat	1	42	(0)	1553355
2076	9.3	2.8	0.0	chr17	4909369	4909648	(78347793)	C	AluSx	SINE/Alu	(11)	301	14	1554030
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
1848	7.5	0.0	0.0	chr17	5192204	5192429	(78065012)	C	AluSx1	SINE/Alu	(15)	297	72	1554577
533	30.6	1.6	4.2	chr17	5897717	5897907	(77359534)	C	MIRb	SINE/MIR	(59)	209	24	1556006
45	4.1	2.0	0.0	chr17	6069775	6069825	(77187616)	+	(GT)n	Simple_repeat	1	52	(0)	1556345
16	16.1	0.0	0.0	chr17	6069925	6069952	(77187489)	+	(GT)n	Simple_repeat	1	28	(0)	1556346
45	39.5	0.0	5.0	chr17	6233391	6233692	(77023749)	+	(AC)n	Simple_repeat	1	302	(0)	1556649
44	0.0	0.0	0.0	chr17	6233711	6233748	(77023693)	+	(AC)n	Simple_repeat	1	38	(0)	1556649
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
13	14.4	5.0	2.4	chr17	6461838	6461877	(76795564)	+	(TCCTCCC)n	Simple_repeat	1	42	(0)	1557137
283	26.2	1.2	0.0	chr17	6714247	6714326	(76543115)	C	L2b	LINE/L2	(11)	3364	3284	1557588
2231	9.5	1.9	0.0	chr17	7133183	7133360	(76124081)	C	AluSx1	SINE/Alu	(0)	312	134	1558296
30	0.0	0.0	0.0	chr17	7133361	7133388	(76124053)	+	(T)n	Simple_repeat	1	28	(0)	1558297
2231	9.5	1.9	0.0	chr17	7133389	7133515	(76123926)	C	AluSx1	SINE/Alu	(184)	128	1	1558296
697	26.4	3.0	0.8	chr17	7174610	7176778	(76080663)	+	(CA)n	Simple_repeat	1	2233	(0)	1558389
17	27.6	1.7	0.0	chr17	7178568	7178625	(76078816)	+	G-rich	Low_complexity	1	59	(0)	1558391
13	16.3	2.1	6.1	chr17	7239468	7239500	(76017941)	+	(GCC)n	Simple_repeat	1	30	(0)	1558483
28	4.2	0.0	8.6	chr17	7239501	7239558	(76017883)	+	(CCT)n	Simple_repeat	1	58	(0)	1558484
323	33.0	11.0	1.9	chr17	7295903	7296213	(75961228)	+	L2a	LINE/L2	3016	3425	(1)	1558577
258	5.6	0.0	0.0	chr17	7296286	7296334	(75961107)	+	FLAM_C	SINE/Alu	1	34	(99)	1558578
261	29.2	1.4	4.9	chr17	7351091	7351215	(75906226)	C	L2a	LINE/L2	(0)	3426	3255	1558665
24	18.0	0.0	1.9	chr17	7438282	7438333	(75819108)	+	(CGC)n	Simple_repeat	1	52	(0)	1558826
12	14.1	3.0	2.9	chr17	7440207	7440239	(75817202)	+	(GCCCCC)n	Simple_repeat	1	34	(0)	1558827
13	21.9	2.3	2.2	chr17	7922734	7922777	(75334664)	+	(TGTTTT)n	Simple_repeat	1	45	(0)	1559754
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
670	0.0	0.0	0.0	chr17	8186358	8186429	(75071012)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1560263
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
15	31.6	0.0	3.0	chr17	8189693	8189758	(75067683)	+	(CCT)n	Simple_repeat	1	66	(0)	1560268
19	23.1	5.2	3.7	chr17	8210229	8210305	(75047136)	+	GA-rich	Low_complexity	1	81	(0)	1560323
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
434	29.1	11.2	2.5	chr17	8376267	8376428	(74881013)	+	MIR	SINE/MIR	46	223	(39)	1560688
2390	6.6	3.5	1.0	chr17	8384034	8384050	(74873391)	C	AluSq	SINE/Alu	(0)	313	298	1560700
78	0.0	0.0	0.0	chr17	8384051	8384116	(74873325)	+	(GT)n	Simple_repeat	1	66	(0)	1560701
2390	6.6	3.5	1.0	chr17	8384117	8384403	(74873038)	C	AluSq	SINE/Alu	(16)	297	1	1560700
21	19.3	0.0	2.0	chr17	8631710	8631759	(74625682)	+	(TTCA)n	Simple_repeat	1	50	(0)	1561113
37	2.8	0.0	0.0	chr17	9170862	9170897	(74086544)	+	(AC)n	Simple_repeat	1	36	(0)	1562193
222	20.0	0.0	0.0	chr17	11997717	11997761	(71259680)	C	MIRb	SINE/MIR	(14)	254	210	1567386
2175	8.4	0.0	0.0	chr17	16453009	16453281	(66804160)	+	AluSx4	SINE/Alu	1	273	(37)	1575011
43	10.0	0.0	0.0	chr17	16453298	16453363	(66804078)	+	(ACACAC)n	Simple_repeat	1	66	(0)	1575012
222	32.1	7.7	2.3	chr17	16453476	16453561	(66803880)	+	MIRc	SINE/MIR	119	209	(59)	1575013
740	28.8	3.2	6.5	chr17	16453607	16453678	(66803763)	C	MIR	SINE/MIR	(1)	261	199	1575014
2176	16.9	14.5	2.1	chr17	16511527	16511968	(66745473)	+	MLT2B4	LTR/ERVL	4	516	(40)	1575125
54	0.0	0.0	0.0	chr17	16511969	16512014	(66745427)	+	(AC)n	Simple_repeat	1	46	(0)	1575126
2176	16.9	14.5	2.1	chr17	16512015	16512054	(66745387)	+	MLT2B4	LTR/ERVL	517	556	(0)	1575125
322	30.0	11.7	8.5	chr17	16512055	16512302	(66745139)	C	MLT1K	LTR/ERVL-MaLR	(22)	573	317	1575127
21	29.5	0.0	5.7	chr17	17477089	17477193	(65780248)	+	(GCCGCC)n	Simple_repeat	1	105	(0)	1576739
314	26.5	3.8	0.0	chr17	17477325	17477426	(65780015)	C	MIR3	SINE/MIR	(21)	187	82	1576740
11	21.8	0.0	4.9	chr17	17591984	17592024	(65665417)	+	G-rich	Low_complexity	1	41	(0)	1576914
12	22.5	3.5	5.1	chr17	17740943	17740999	(65516442)	+	G-rich	Low_complexity	1	59	(0)	1577256
36	24.3	0.0	0.0	chr17	17741092	17741170	(65516271)	+	(CA)n	Simple_repeat	1	79	(0)	1577257
17	28.9	0.0	0.0	chr17	17741242	17741282	(65516159)	+	GA-rich	Low_complexity	1	41	(0)	1577258
224	13.2	0.5	4.7	chr17	18088113	18088165	(65169276)	+	MIR1_Amn	SINE/MIR	112	163	(105)	1577927
342	27.8	16.9	2.2	chr17	18362898	18363066	(64894375)	+	MIR	SINE/MIR	18	222	(46)	1578435
238	30.8	0.0	7.1	chr17	19363230	19363313	(63894128)	C	MIR3	SINE/MIR	(22)	186	109	1580462
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
12	18.8	2.6	2.6	chr17	19867221	19867258	(63390183)	+	(GCGGCTC)n	Simple_repeat	1	39	(0)	1581428
13	17.1	5.9	6.9	chr17	19867480	19867547	(63389894)	+	G-rich	Low_complexity	1	72	(0)	1581429
13	17.7	5.3	0.0	chr17	19868095	19868132	(63389309)	+	G-rich	Low_complexity	1	40	(0)	1581431
716	19.9	3.3	6.4	chr17	20008915	20009102	(63248339)	C	MER5A	DNA/hAT-Charlie	(3)	186	5	1581767
35	34.1	2.8	4.7	chr17	21042336	21042586	(62214855)	+	G-rich	Low_complexity	1	258	(0)	1583514
15	30.1	5.8	2.8	chr17	21042490	21042592	(62214849)	+	GA-rich	Low_complexity	1	109	(0)	1583515
1548	25.5	8.9	0.9	chr17	21126195	21126741	(62130700)	C	L1M5	LINE/L1	(854)	5292	4698	1583713
15	19.1	2.6	2.6	chr17	21280325	21280362	(61977079)	+	(TG)n	Simple_repeat	1	39	(0)	1583995
1235	24.4	10.8	1.0	chr17	21280435	21280704	(61976737)	+	L2a	LINE/L2	2962	3249	(177)	1583996
1690	16.1	5.8	2.5	chr17	21280705	21280989	(61976452)	C	AluJb	SINE/Alu	(17)	295	1	1583997
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
2851	1.3	0.0	0.0	chr17	28250898	28251206	(55006235)	C	AluYb8	SINE/Alu	(9)	309	1	1588332
544	34.5	11.6	0.7	chr17	28381869	28382464	(54874977)	C	L2c	LINE/L2	(231)	3156	2340	1588555
207	29.0	9.7	1.1	chr17	28402408	28402501	(54854940)	+	L3b	LINE/CR1	4997	5099	(133)	1588602
558	26.9	8.8	1.2	chr17	28402612	28402780	(54854661)	+	MIRb	SINE/MIR	4	186	(82)	1588603
1292	26.9	6.0	3.9	chr17	28402783	28403274	(54854167)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	1588604
12	25.6	2.4	0.0	chr17	28552222	28552263	(54705178)	+	G-rich	Low_complexity	1	43	(0)	1588900
14	21.5	4.0	1.9	chr17	28552640	28552689	(54704752)	+	(CCCCGC)n	Simple_repeat	1	52	(0)	1588901
667	27.1	3.5	2.5	chr17	28599570	28599766	(54657675)	C	MIR	SINE/MIR	(2)	260	62	1588986
32	12.1	3.9	3.8	chr17	28726266	28726342	(54531099)	+	(GCCCCC)n	Simple_repeat	1	80	(0)	1589203
2559	7.1	0.0	0.3	chr17	28727612	28727920	(54529521)	C	AluSx	SINE/Alu	(4)	308	1	1589205
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
525	32.5	3.0	3.3	chr17	29037486	29037787	(54219654)	C	L2c	LINE/L2	(469)	2950	2650	1589813
13	15.2	0.0	3.2	chr17	29037932	29037962	(54219479)	+	(CCTG)n	Simple_repeat	1	31	(0)	1589814
275	33.6	0.0	0.9	chr17	29042850	29042963	(54214478)	+	Eulor8	DNA/TcMar?	381	493	(69)	1589828
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
12	16.9	2.9	2.8	chr17	30235684	30235718	(53021723)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1592201
18	22.9	6.1	0.0	chr17	30709071	30709136	(52548305)	+	(GCCCC)n	Simple_repeat	1	70	(0)	1593097
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
13	18.9	2.8	0.0	chr17	31549832	31549867	(51707574)	+	(GCGGAGG)n	Simple_repeat	1	37	(0)	1594797
17	13.7	0.0	0.0	chr17	31549981	31550012	(51707429)	+	(CGGGGC)n	Simple_repeat	1	32	(0)	1594798
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
18	19.1	3.7	7.1	chr17	32486611	32486692	(50770749)	+	(GGCG)n	Simple_repeat	1	85	(0)	1596915
328	29.7	13.3	1.5	chr17	32927644	32927841	(50329600)	C	MIR	SINE/MIR	(0)	262	38	1597647
23	24.4	0.0	8.8	chr17	32928028	32928141	(50329300)	+	G-rich	Low_complexity	1	114	(0)	1597648
56	0.0	0.0	0.0	chr17	34157871	34157918	(49099523)	+	(GT)n	Simple_repeat	1	48	(0)	1599973
42	0.0	0.0	0.0	chr17	34157960	34157995	(49099446)	+	(GT)n	Simple_repeat	1	36	(0)	1599973
440	37.9	9.1	5.2	chr17	34797942	34798362	(48459079)	+	L2b	LINE/L2	2918	3356	(19)	1601091
1573	15.6	0.7	4.3	chr17	35142541	35142842	(48114599)	C	AluJr	SINE/Alu	(21)	291	1	1601791
1468	14.8	4.7	6.2	chr17	35448926	35449044	(47808397)	+	AluJb	SINE/Alu	1	117	(195)	1602227
18	23.6	0.0	0.0	chr17	35587383	35587428	(47670013)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	1602448
13	20.5	6.7	0.0	chr17	35741251	35741295	(47516146)	+	(CGCTG)n	Simple_repeat	1	48	(0)	1602707
13	24.0	2.2	2.1	chr17	35795625	35795670	(47461771)	+	G-rich	Low_complexity	1	47	(0)	1602817
1284	15.6	14.9	0.0	chr17	36535656	36535911	(46721530)	C	AluJr	SINE/Alu	(10)	302	2	1604120
69	29.1	0.0	0.5	chr17	36657358	36657541	(46599900)	+	(CA)n	Simple_repeat	1	184	(0)	1604354
252	29.0	2.0	2.7	chr17	36741265	36742240	(46515201)	+	(GT)n	Simple_repeat	1	996	(0)	1604547
19	22.2	1.9	0.0	chr17	36948809	36948860	(46308581)	+	(CGCGCA)n	Simple_repeat	1	53	(0)	1604977
28	21.3	3.8	8.4	chr17	37406970	37407129	(45850312)	+	G-rich	Low_complexity	1	166	(0)	1605793
270	27.8	8.1	11.8	chr17	38450706	38450817	(44806624)	+	MIRc	SINE/MIR	132	243	(25)	1607888
25	19.2	3.4	8.2	chr17	38452083	38452200	(44805241)	+	(CCCT)n	Simple_repeat	1	122	(0)	1607890
203	27.2	18.2	0.0	chr17	38560773	38560853	(44696588)	+	L2b	LINE/L2	3242	3340	(35)	1608094
194	32.7	0.0	0.0	chr17	38560870	38560921	(44696520)	C	MamRTE1	LINE/RTE-BovB	(2739)	1073	1022	1608095
254	28.6	9.7	0.0	chr17	38561120	38561203	(44696238)	C	MIR3	SINE/MIR	(25)	183	91	1608096
23	25.7	5.1	1.9	chr17	38563815	38563912	(44693529)	+	GA-rich	Low_complexity	1	103	(0)	1608098
186	28.6	1.8	0.0	chr17	38609879	38609934	(44647507)	+	L2c	LINE/L2	3268	3324	(63)	1608168
400	24.5	2.1	0.0	chr17	38609992	38610085	(44647356)	C	MER5A	DNA/hAT-Charlie	(30)	159	64	1608169
454	30.4	9.0	6.8	chr17	38663107	38663530	(44593911)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	15	1608304
16	7.4	0.0	6.1	chr17	38674846	38674882	(44582559)	+	(CCCGGG)n	Simple_repeat	1	34	(0)	1608325
14	23.1	0.0	0.0	chr17	38675119	38675154	(44582287)	+	G-rich	Low_complexity	1	36	(0)	1608326
19	21.9	4.2	2.7	chr17	38702481	38702552	(44554889)	+	G-rich	Low_complexity	1	75	(0)	1608406
416	30.3	8.4	0.7	chr17	38702582	38702734	(44554707)	C	MIRb	SINE/MIR	(19)	249	84	1608407
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
15	18.3	0.0	2.6	chr17	39461980	39462018	(43795423)	+	G-rich	Low_complexity	1	39	(0)	1610149
13	6.8	9.7	0.0	chr17	39668189	39668221	(43589220)	+	G-rich	Low_complexity	1	36	(0)	1610553
15	18.1	2.6	0.0	chr17	39728510	39728548	(43528893)	+	(TTTTCTT)n	Simple_repeat	1	40	(0)	1610669
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
11	18.1	2.4	4.8	chr17	40063411	40063451	(43193990)	+	(CCCGCCG)n	Simple_repeat	1	42	(0)	1611289
12	25.7	2.1	2.0	chr17	40063469	40063516	(43193925)	+	(CCCGAGC)n	Simple_repeat	1	49	(0)	1611290
15	7.8	0.0	3.5	chr17	40099088	40099116	(43158325)	+	(GGCGG)n	Simple_repeat	1	29	(0)	1611348
2430	5.3	0.0	2.0	chr17	40288422	40288586	(42968855)	C	AluSq2	SINE/Alu	(16)	297	137	1611781
653	27.3	19.3	0.6	chr17	40464746	40465073	(42792368)	+	L2a	LINE/L2	3023	3426	(0)	1612096
239	31.4	1.0	4.7	chr17	40465156	40465262	(42792179)	+	OldhAT1	DNA/hAT-Ac	1901	2003	(845)	1612097
2537	6.9	0.3	0.0	chr17	40465275	40465577	(42791864)	+	AluSp	SINE/Alu	1	304	(9)	1612098
19	3.4	3.3	0.0	chr17	40476227	40476256	(42781185)	+	(GGGTGG)n	Simple_repeat	1	31	(0)	1612126
70	0.0	0.0	0.0	chr17	40476370	40476429	(42781012)	+	(GT)n	Simple_repeat	1	60	(0)	1612127
2142	11.7	1.3	0.0	chr17	40476584	40476881	(42780560)	+	AluSx	SINE/Alu	2	303	(9)	1612128
706	28.4	5.3	6.4	chr17	40533048	40533314	(42724127)	+	MIR	SINE/MIR	5	268	(0)	1612256
55	0.0	0.0	0.0	chr17	40533544	40533590	(42723851)	+	(TG)n	Simple_repeat	1	47	(0)	1612257
2280	8.7	1.6	0.0	chr17	41663068	41663365	(41594076)	C	AluSx	SINE/Alu	(9)	303	1	1613982
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
399	22.6	2.0	2.8	chr17	41793587	41793709	(41463732)	C	MIR3	SINE/MIR	(132)	136	14	1614307
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
13	0.0	0.0	8.0	chr17	42050479	42050503	(41206938)	+	(CCGC)n	Simple_repeat	1	25	(0)	1614843
13	17.2	7.8	4.3	chr17	42050740	42050803	(41206638)	+	(CGCCCCA)n	Simple_repeat	1	69	(0)	1614844
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
257	33.0	9.2	1.6	chr17	42184602	42184826	(41072615)	+	L2c	LINE/L2	2989	3238	(149)	1615099
13	15.8	2.7	2.6	chr17	42276584	42276620	(40980821)	+	(GGTGCC)n	Simple_repeat	1	38	(0)	1615286
406	26.5	10.7	1.1	chr17	42554009	42554186	(40703255)	C	MIRb	SINE/MIR	(31)	237	35	1615879
26	14.7	1.8	1.8	chr17	42554307	42554362	(40703079)	+	G-rich	Low_complexity	1	57	(0)	1615880
13	20.2	0.0	2.7	chr17	42659145	42659181	(40598260)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1616103
20	19.3	2.8	5.4	chr17	42670198	42670269	(40587172)	+	G-rich	Low_complexity	1	74	(0)	1616123
13	15.5	9.3	0.0	chr17	42745050	42745095	(40512346)	+	(GCGCCCC)n	Simple_repeat	1	50	(0)	1616277
1777	19.2	4.5	12.9	chr17	42745472	42745660	(40511781)	+	L1MC4a	LINE/L1	7234	7404	(638)	1616278
187	33.1	6.1	6.7	chr17	42773138	42773257	(40484184)	+	MIR1_Amn	SINE/MIR	6	118	(90)	1616344
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
265	28.6	3.2	0.0	chr17	44142270	44142360	(39115081)	+	MIR3	SINE/MIR	36	129	(79)	1619320
12	22.4	3.5	5.1	chr17	44200421	44200477	(39056964)	+	(CTCCC)n	Simple_repeat	1	59	(0)	1619434
199	36.2	3.5	2.8	chr17	44384624	44384765	(38872676)	C	MIR3	SINE/MIR	(0)	208	66	1619820
19	19.1	1.3	7.8	chr17	44384767	44384842	(38872599)	+	(GCGGTGG)n	Simple_repeat	1	77	(0)	1619821
253	28.1	3.0	0.0	chr17	44503775	44503838	(38753603)	+	MIR	SINE/MIR	2	67	(195)	1620073
17	20.2	2.1	2.1	chr17	44656480	44656526	(38600915)	+	(GGC)n	Simple_repeat	1	48	(0)	1620447
310	27.7	9.8	2.3	chr17	44689917	44690110	(38567331)	C	MIRb	SINE/MIR	(47)	221	3	1620501
33	17.5	0.0	8.5	chr17	45132523	45132628	(38124813)	+	G-rich	Low_complexity	1	106	(0)	1621409
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
12	5.5	0.0	0.0	chr17	45248052	45248070	(38009371)	+	(GGA)n	Simple_repeat	1	19	(0)	1621666
769	15.4	0.0	2.9	chr17	45371423	45371558	(37885883)	C	AluJr	SINE/Alu	(180)	132	1	1621917
368	24.2	1.5	13.0	chr17	45371559	45371607	(37885834)	+	L1ME4b	LINE/L1	845	889	(3)	1621912
13	8.1	0.0	6.7	chr17	46772763	46772792	(36484649)	+	(CCCAC)n	Simple_repeat	1	30	(0)	1624687
61	0.0	0.0	0.0	chr17	46852390	46852441	(36405000)	+	(GT)n	Simple_repeat	1	52	(0)	1624849
12	9.8	0.0	0.0	chr17	46978379	46978400	(36279041)	+	(AACA)n	Simple_repeat	1	22	(0)	1625085
12	31.3	0.0	0.0	chr17	47324096	47324142	(35933299)	+	G-rich	Low_complexity	1	47	(0)	1625797
394	27.1	1.6	0.0	chr17	47649133	47649257	(35608184)	+	MIR3	SINE/MIR	61	182	(26)	1626487
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
15	14.2	10.7	1.6	chr17	47650121	47650176	(35607265)	+	(ACCCC)n	Simple_repeat	1	62	(0)	1626489
13	9.7	0.0	0.0	chr17	47650223	47650244	(35607197)	+	(CGC)n	Simple_repeat	1	22	(0)	1626490
15	14.9	2.6	2.5	chr17	48101118	48101156	(35156285)	+	G-rich	Low_complexity	1	40	(0)	1627294
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
14	23.0	1.6	6.2	chr17	48107845	48107907	(35149534)	+	G-rich	Low_complexity	1	64	(0)	1627313
17	22.1	1.9	1.8	chr17	48161226	48161279	(35096162)	+	A-rich	Low_complexity	1	55	(0)	1627407
464	36.6	3.6	0.8	chr17	49497955	49498199	(33759242)	C	MIRb	SINE/MIR	(14)	254	3	1630056
219	26.8	5.3	1.4	chr17	49880857	49880928	(33376513)	C	MIRc	SINE/MIR	(109)	159	85	1630747
36	0.0	0.0	0.0	chr17	49908974	49909004	(33348437)	+	(AC)n	Simple_repeat	1	31	(0)	1630800
63	33.0	0.5	0.0	chr17	49909019	49909222	(33348219)	+	(CA)n	Simple_repeat	1	205	(0)	1630801
30	8.3	0.0	0.0	chr17	50129804	50129842	(33127599)	+	(GT)n	Simple_repeat	1	39	(0)	1631212
22	6.2	5.9	0.0	chr17	50129845	50129878	(33127563)	+	(AG)n	Simple_repeat	1	36	(0)	1631213
237	25.4	10.2	11.5	chr17	50130261	50130478	(33126963)	C	L2b	LINE/L2	(1)	3374	3160	1631214
191	22.7	0.9	0.2	chr17	50166647	50167074	(33090367)	+	(CA)n	Simple_repeat	1	432	(0)	1631272
212	28.6	20.0	0.0	chr17	50178605	50178716	(33078725)	+	MIRb	SINE/MIR	50	189	(79)	1631288
16	20.5	1.4	0.0	chr17	50865473	50865518	(32391923)	+	GA-rich	Low_complexity	1	46	(0)	1632609
15	28.4	1.6	1.6	chr17	50865613	50865673	(32391768)	+	(GCCCC)n	Simple_repeat	1	62	(0)	1632610
12	21.0	5.9	1.9	chr17	51166774	51166824	(32090617)	+	(CGCGCC)n	Simple_repeat	1	54	(0)	1633282
12	20.1	6.2	2.0	chr17	56833757	56833804	(26423637)	+	(GCGGCGC)n	Simple_repeat	1	51	(0)	1642080
13	11.4	0.0	6.2	chr17	56914103	56914134	(26343307)	+	(GCGG)n	Simple_repeat	1	32	(0)	1642230
49	0.0	0.0	0.0	chr17	57905250	57905291	(25352150)	+	(AC)n	Simple_repeat	1	42	(0)	1644082
25	6.3	0.0	0.0	chr17	57987807	57987839	(25269602)	+	(GT)n	Simple_repeat	1	33	(0)	1644234
13	21.6	0.0	0.0	chr17	58006405	58006436	(25251005)	+	(CCG)n	Simple_repeat	1	32	(0)	1644249
208	17.8	0.0	2.2	chr17	58120116	58120161	(25137280)	+	L2a	LINE/L2	3378	3422	(4)	1644489
196	16.5	0.0	0.0	chr17	58120200	58120254	(25137187)	C	L2a	LINE/L2	(1)	3425	3332	1644490
5602	9.5	3.5	2.8	chr17	59290107	59290917	(23966524)	C	LTR5_Hs	LTR/ERVK	(151)	817	1	1646915
2277	9.4	0.3	1.6	chr17	59290952	59291258	(23966183)	C	AluSq2	SINE/Alu	(10)	303	1	1646916
208	18.8	4.1	0.0	chr17	59565188	59565236	(23692205)	+	MIRc	SINE/MIR	61	108	(100)	1647535
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
12	19.9	0.0	0.0	chr17	59893146	59893174	(23364267)	+	(GGC)n	Simple_repeat	1	29	(0)	1648197
115	17.3	0.5	0.0	chr17	60155496	60155703	(23101738)	+	(CA)n	Simple_repeat	1	209	(0)	1648686
12	15.8	0.0	3.3	chr17	63446789	63446818	(19810623)	+	(CCCCG)n	Simple_repeat	1	30	(0)	1654720
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
2029	9.7	7.0	0.0	chr17	63848520	63848797	(19408644)	+	AluSx	SINE/Alu	1	299	(13)	1655457
12	22.6	1.9	5.7	chr17	63848843	63848894	(19408547)	+	(CCAG)n	Simple_repeat	1	53	(0)	1655458
243	34.6	1.3	0.0	chr17	63997626	63997703	(19259738)	C	MamSINE1	SINE/tRNA-RTE	(10)	280	202	1655724
13	20.9	4.5	0.0	chr17	63998247	63998290	(19259151)	+	G-rich	Low_complexity	1	46	(0)	1655725
180	34.1	3.0	9.5	chr17	63999421	63999737	(19257704)	C	L2c	LINE/L2	(126)	3261	2966	1655727
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
30	7.0	2.9	7.0	chr17	64662354	64662422	(18595019)	+	G-rich	Low_complexity	1	71	(0)	1657019
15	28.8	1.9	6.5	chr17	64975604	64975708	(18281733)	+	(ACGCC)n	Simple_repeat	1	107	(0)	1657692
191	23.2	1.4	4.2	chr17	65573198	65573269	(17684172)	C	L2c	LINE/L2	(43)	3344	3275	1658915
75	29.9	0.4	0.9	chr17	67257681	67257909	(15999532)	+	(TG)n	Simple_repeat	1	230	(0)	1661618
17	28.0	1.4	4.0	chr17	67377442	67377515	(15879926)	+	(GGC)n	Simple_repeat	1	75	(0)	1661911
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
229	23.1	18.9	6.5	chr17	68198743	68198887	(15058554)	C	MIRc	SINE/MIR	(108)	160	2	1663728
12	26.2	0.0	2.3	chr17	68199359	68199401	(15058040)	+	(GCCT)n	Simple_repeat	1	43	(0)	1663729
13	19.1	0.0	0.0	chr17	68292140	68292169	(14965272)	+	(GCA)n	Simple_repeat	1	30	(0)	1663905
15	14.8	2.4	4.8	chr17	68512499	68512539	(14744902)	+	(CGC)n	Simple_repeat	1	42	(0)	1664337
21	0.0	0.0	0.0	chr17	71032588	71032610	(12224831)	+	(T)n	Simple_repeat	1	23	(0)	1668167
13	20.8	4.3	2.1	chr17	72121831	72121876	(11135565)	+	(CGG)n	Simple_repeat	1	48	(0)	1669836
807	24.8	6.9	6.0	chr17	72477048	72477365	(10780076)	+	MER33	DNA/hAT-Charlie	3	323	(1)	1670443
407	31.9	0.9	0.5	chr17	73953166	73954621	(9302820)	+	(CA)n	Simple_repeat	1	1461	(0)	1673236
78	19.7	0.0	0.0	chr17	74163318	74163473	(9093968)	+	(TGTGTG)n	Simple_repeat	1	156	(0)	1673602
1600	30.5	12.7	5.9	chr17	74163648	74164884	(9092557)	+	L2a	LINE/L2	1844	3188	(238)	1673603
556	24.4	6.9	4.6	chr17	74186127	74186367	(9071074)	C	L1ME3A	LINE/L1	(3)	6170	5924	1673647
271	31.2	4.3	4.9	chr17	74186380	74186541	(9070900)	C	L2b	LINE/L2	(150)	3237	3070	1673648
78	27.2	0.0	1.0	chr17	74186542	74186739	(9070702)	+	(GTGT)n	Simple_repeat	1	198	(0)	1673649
142	33.2	1.3	0.9	chr17	74563248	74563804	(8693637)	+	(CA)n	Simple_repeat	1	564	(0)	1674376
15	20.2	0.0	6.7	chr17	74852344	74852388	(8405053)	+	(CG)n	Simple_repeat	1	45	(0)	1674875
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
444	26.3	17.1	1.7	chr17	75012148	75012383	(8245058)	C	L2a	LINE/L2	(4)	3422	3143	1675179
2148	8.2	0.0	0.0	chr17	75046100	75046380	(8211061)	C	AluSx3	SINE/Alu	(29)	282	2	1675235
365	20.8	1.3	0.0	chr17	75046405	75046481	(8210960)	+	L2a	LINE/L2	3347	3424	(2)	1675236
16	8.3	0.0	0.0	chr17	75182636	75182661	(8074780)	+	(GGGA)n	Simple_repeat	1	26	(0)	1675545
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
14	19.7	4.2	2.0	chr17	75588997	75589044	(7668397)	+	G-rich	Low_complexity	1	50	(0)	1676427
21	12.2	0.0	0.0	chr17	75589193	75589228	(7668213)	+	(GGC)n	Simple_repeat	1	36	(0)	1676428
569	31.4	8.2	0.9	chr17	76102742	76102956	(7154485)	C	MIRb	SINE/MIR	(14)	254	23	1677377
124	0.0	0.8	1.7	chr17	76121216	76121333	(7136108)	+	(CA)n	Simple_repeat	1	119	(0)	1677425
20	3.7	0.0	0.0	chr17	76121563	76121598	(7135843)	+	(CCGGG)n	Simple_repeat	1	36	(0)	1677426
36	0.0	0.0	0.0	chr17	76182452	76182482	(7074959)	+	(TG)n	Simple_repeat	1	31	(0)	1677517
13	7.8	3.5	3.3	chr17	76239773	76239801	(7017640)	+	(GGGCC)n	Simple_repeat	1	30	(0)	1677640
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
202	29.8	4.0	4.8	chr17	76557890	76558010	(6699431)	+	MIR	SINE/MIR	96	216	(52)	1678274
235	33.7	3.8	1.0	chr17	76909822	76909923	(6347518)	+	UCON132b	DNA/hAT-Tip100	1	105	(43)	1679019
22	37.9	0.8	0.8	chr17	76910450	76910567	(6346874)	+	(CACA)n	Simple_repeat	1	119	(0)	1679020
1860	15.3	1.3	0.0	chr17	77019704	77019997	(6237444)	C	AluJb	SINE/Alu	(14)	298	1	1679256
1129	14.8	3.2	4.6	chr17	77019998	77020147	(6237294)	C	MLT1A0	LTR/ERVL-MaLR	(207)	158	7	1679255
12	23.2	0.0	4.5	chr17	77140636	77140679	(6116762)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1679537
62	0.0	0.0	0.0	chr17	77466055	77466107	(5791334)	+	(CA)n	Simple_repeat	1	53	(0)	1680089
2313	12.1	0.0	1.0	chr17	77789513	77789826	(5467615)	C	AluSx	SINE/Alu	(1)	311	1	1680646
195	27.1	0.5	2.0	chr17	77790612	77790711	(5466730)	C	L2c	LINE/L2	(272)	3115	3019	1680641
1751	23.7	3.0	4.5	chr17	77790804	77791130	(5466311)	+	MER63D	DNA/hAT-Blackjack	6	333	(728)	1680647
15	22.7	0.0	2.6	chr17	77882016	77882053	(5375388)	+	(GT)n	Simple_repeat	1	38	(0)	1680813
281	31.6	0.0	2.1	chr17	77924827	77924923	(5332518)	C	UCON35	Unknown	(34)	97	3	1680893
1024	4.7	7.2	0.0	chr17	78254012	78254140	(5003301)	C	MER85	DNA/PiggyBac	(0)	139	1	1681497
53	0.0	0.0	0.0	chr17	78254749	78254793	(5002648)	+	(GT)n	Simple_repeat	1	45	(0)	1681498
2398	9.8	0.3	0.0	chr17	78289536	78289840	(4967601)	C	AluSp	SINE/Alu	(7)	306	1	1681577
102	18.5	2.8	0.0	chr17	78290011	78290224	(4967217)	+	(GT)n	Simple_repeat	1	220	(0)	1681578
413	29.4	17.3	2.1	chr17	78290405	78290595	(4966846)	C	MIR	SINE/MIR	(15)	247	22	1681579
19	42.6	1.1	3.7	chr17	78317345	78317457	(4939984)	+	(GTGCGT)n	Simple_repeat	1	189	(0)	1681639
21	35.3	0.0	1.4	chr17	78317458	78317531	(4939910)	+	(TG)n	Simple_repeat	1	74	(0)	1681640
124	41.4	0.3	0.2	chr17	78893056	78893676	(4363765)	+	(TG)n	Simple_repeat	1	623	(0)	1682639
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
14	13.3	9.5	4.3	chr17	80036887	80036949	(3220492)	+	(CCCTCTCT)n	Simple_repeat	1	69	(0)	1684339
484	30.9	8.3	0.0	chr17	80196307	80196539	(3060902)	C	Charlie13b	DNA/hAT-Charlie	(31)	481	228	1684640
17	15.9	0.0	0.0	chr17	80220323	80220357	(3037084)	+	(GGCTCG)n	Simple_repeat	1	35	(0)	1684680
16	21.4	0.0	8.6	chr17	80220366	80220435	(3037006)	+	(CCCGC)n	Simple_repeat	1	70	(0)	1684681
14	9.0	5.1	4.9	chr17	80220512	80220550	(3036891)	+	G-rich	Low_complexity	1	41	(0)	1684682
368	28.7	7.5	3.7	chr17	80224480	80224633	(3032808)	C	MIRb	SINE/MIR	(3)	265	102	1684688
1927	10.0	1.5	0.4	chr17	80261737	80261996	(2995445)	+	AluSx	SINE/Alu	1	263	(49)	1684775
837	12.2	0.9	0.0	chr17	80441002	80441116	(2816325)	+	AluJo	SINE/Alu	3	118	(194)	1685019
234	28.2	11.4	7.9	chr17	80827798	80827924	(2429517)	C	MIR	SINE/MIR	(13)	249	118	1685581
15	21.6	2.3	0.0	chr17	81386947	81386989	(1870452)	+	G-rich	Low_complexity	1	44	(0)	1686222
13	17.6	2.4	4.7	chr17	81537896	81537937	(1719504)	+	(CCCTG)n	Simple_repeat	1	43	(0)	1686375
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
1203	7.5	0.0	0.0	chr17	81711642	81711827	(1545614)	C	AluSx	SINE/Alu	(0)	312	136	1686674
27	21.1	3.2	4.1	chr17	81712270	81712364	(1545077)	+	G-rich	Low_complexity	1	98	(0)	1686675
159	30.4	1.3	1.1	chr17	81984771	81985304	(1272137)	+	(AC)n	Simple_repeat	1	541	(0)	1687017
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
13	20.2	7.8	0.0	chr17	82232245	82232295	(1025146)	+	G-rich	Low_complexity	1	55	(0)	1687368
320	29.2	0.9	0.0	chr17	82292819	82292924	(964517)	C	MLT1K	LTR/ERVL-MaLR	(336)	259	153	1687436
16	23.6	0.0	0.0	chr17	82450409	82450443	(806998)	+	(CA)n	Simple_repeat	1	35	(0)	1687654
13	0.0	0.0	0.0	chr17	82458441	82458457	(798984)	+	(GCC)n	Simple_repeat	1	17	(0)	1687667
453	22.5	4.2	0.0	chr17	83078799	83078936	(178505)	+	MER20	DNA/hAT-Charlie	42	185	(34)	1688552
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
1937	8.6	6.9	0.4	chr18	656964	657219	(79716066)	C	AluSx	SINE/Alu	(37)	275	2	1690193
2286	11.0	0.7	0.0	chr18	1091848	1092156	(79281129)	C	AluSq	SINE/Alu	(2)	311	1	1690944
797	22.6	15.7	4.8	chr18	2932610	2932986	(77440299)	+	MLT1J2	LTR/ERVL-MaLR	21	446	(2)	1693482
14	12.6	0.0	7.5	chr18	3448257	3448296	(76924989)	+	(CCTCCTC)n	Simple_repeat	1	40	(0)	1694436
17	15.4	6.2	5.8	chr18	3450073	3450137	(76923148)	+	(GCG)n	Simple_repeat	1	69	(0)	1694438
24	26.1	0.0	0.0	chr18	4454407	4454465	(75918820)	+	(TC)n	Simple_repeat	1	59	(0)	1696016
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
44	0.0	2.4	0.0	chr18	5629410	5629450	(74743835)	+	(AC)n	Simple_repeat	1	42	(0)	1697496
20	21.9	3.0	2.9	chr18	5890992	5891058	(74482227)	+	(GGC)n	Simple_repeat	1	69	(0)	1697828
33	2.9	0.0	0.0	chr18	7567432	7567466	(72805819)	+	(CGGCCA)n	Simple_repeat	1	35	(0)	1700299
12	17.5	3.1	0.0	chr18	7568401	7568432	(72804853)	+	(TGCCC)n	Simple_repeat	1	33	(0)	1700300
250	31.7	0.0	0.0	chr18	9334063	9334122	(71039163)	C	MER5A	DNA/hAT-Charlie	(67)	122	63	1702840
18	23.6	1.6	3.1	chr18	9334698	9334760	(71038525)	+	G-rich	Low_complexity	1	64	(0)	1702841
12	20.1	5.0	0.0	chr18	9335075	9335114	(71038171)	+	G-rich	Low_complexity	1	42	(0)	1702842
29	23.8	1.7	5.9	chr18	9475572	9475687	(70897598)	+	(GGC)n	Simple_repeat	1	118	(0)	1703111
19	28.8	1.5	0.0	chr18	11689657	11689723	(68683562)	+	(CCGGCC)n	Simple_repeat	1	68	(0)	1706192
16	8.8	8.3	0.0	chr18	11767465	11767500	(68605785)	+	(TGCT)n	Simple_repeat	1	39	(0)	1706293
257	28.1	9.5	0.9	chr18	11909263	11909377	(68463908)	C	MIRc	SINE/MIR	(28)	240	115	1706547
481	14.3	1.3	17.7	chr18	12286985	12287126	(68086159)	C	AluJb	SINE/Alu	(167)	135	14	1707136
10921	9.6	0.6	7.5	chr18	12775722	12777416	(67595869)	C	LTR12C	LTR/ERV1	(0)	1579	3	1708112
2339	7.0	0.0	5.5	chr18	12948840	12949166	(67424119)	C	AluSx3	SINE/Alu	(2)	309	1	1708434
120	33.1	0.9	0.7	chr18	13589952	13590384	(66782901)	+	(TG)n	Simple_repeat	1	437	(0)	1709261
477	25.4	2.8	2.1	chr18	26526421	26526561	(53846724)	+	MER113A	DNA/hAT-Charlie	46	187	(127)	1721063
51	2.1	0.0	0.0	chr18	26550558	26550605	(53822680)	+	(AC)n	Simple_repeat	1	48	(0)	1721102
42	0.0	0.0	0.0	chr18	27561594	27561629	(52811656)	+	(GT)n	Simple_repeat	1	36	(0)	1722572
235	35.1	7.0	2.6	chr18	31281249	31281438	(49091847)	C	L3b	LINE/CR1	(345)	4887	4689	1727481
49	0.0	0.0	0.0	chr18	32093106	32093150	(48280135)	+	(CTCCCGCT)n	Simple_repeat	1	45	(0)	1728828
18	19.1	7.5	1.4	chr18	32769561	32769627	(47603658)	+	(TCCC)n	Simple_repeat	1	72	(0)	1729863
17	32.4	2.9	0.0	chr18	33578113	33578181	(46795104)	+	(GC)n	Simple_repeat	1	71	(0)	1730902
46	24.3	2.0	2.6	chr18	33578269	33578458	(46794827)	+	(CCGCCC)n	Simple_repeat	1	188	(0)	1730903
14	11.1	0.0	6.1	chr18	34222908	34222940	(46150345)	+	(CCCT)n	Simple_repeat	1	33	(0)	1731665
16	30.8	1.5	2.9	chr18	34224768	34224834	(46148451)	+	(TG)n	Simple_repeat	1	68	(0)	1731666
23	15.2	3.1	4.5	chr18	34224917	34224929	(46148356)	+	(CCCCT)n	Simple_repeat	1	29	(40)	1731667
13	21.5	4.7	0.0	chr18	34224930	34224972	(46148313)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	1731668
23	15.2	3.1	4.5	chr18	34224973	34224987	(46148298)	+	(CCCCT)n	Simple_repeat	30	69	(0)	1731667
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
213	32.4	14.5	2.1	chr18	34549114	34549258	(45824027)	+	L2	LINE/L2	2655	2820	(599)	1732101
1892	10.3	8.0	2.2	chr18	36067891	36068207	(44305078)	+	L1MA2	LINE/L1	5968	6304	(0)	1734239
437	35.7	4.8	1.0	chr18	36449041	36449241	(43924044)	C	MamTip2	DNA/hAT-Tip100	(96)	209	1	1734802
3320	5.2	0.2	10.4	chr18	42743802	42744300	(37628985)	+	LTR7	LTR/ERV1	1	448	(2)	1743232
13	16.8	0.0	5.4	chr18	45837920	45837956	(34535329)	+	(CCCG)n	Simple_repeat	1	37	(0)	1747505
33	5.6	0.0	0.0	chr18	46335046	46335082	(34038203)	+	(GT)n	Simple_repeat	1	37	(0)	1748476
548	25.9	4.5	2.5	chr18	47176501	47176574	(33196711)	+	Charlie5	DNA/hAT-Charlie	2378	2451	(173)	1749803
2238	4.7	0.0	0.4	chr18	47176575	47176831	(33196454)	C	AluY	SINE/Alu	(17)	294	39	1749804
16	14.4	2.5	2.4	chr18	47930512	47930556	(32442729)	+	G-rich	Low_complexity	1	45	(0)	1751013
2160	12.2	0.3	1.0	chr18	48960227	48960530	(31412755)	C	AluSz	SINE/Alu	(10)	302	1	1752725
165	25.1	2.2	2.0	chr18	49019546	49020039	(31353246)	+	(GT)n	Simple_repeat	1	505	(0)	1752844
306	19.4	4.3	0.0	chr18	49021956	49022022	(31351263)	C	MER91C	DNA/hAT-Tip100	(0)	140	71	1752846
19	23.4	3.5	0.0	chr18	49022068	49022124	(31351161)	+	(ACACAT)n	Simple_repeat	1	59	(0)	1752847
1546	16.8	2.9	1.5	chr18	49022152	49022425	(31350860)	C	AluJr	SINE/Alu	(11)	301	24	1752848
333	34.3	5.2	2.9	chr18	49561277	49561483	(30811802)	C	MIRb	SINE/MIR	(22)	246	35	1753802
250	26.1	9.3	0.0	chr18	49613075	49613162	(30760123)	C	MamTip2	DNA/hAT-Tip100	(41)	264	168	1753901
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
36	2.9	0.0	0.0	chr18	52342267	52342301	(28030984)	+	(GT)n	Simple_repeat	1	35	(0)	1758317
13	13.1	0.0	0.0	chr18	52342359	52342383	(28030902)	+	(CTCC)n	Simple_repeat	1	25	(0)	1758318
12	4.3	8.3	0.0	chr18	52342452	52342475	(28030810)	+	(GGTG)n	Simple_repeat	1	26	(0)	1758319
108	28.2	0.4	0.0	chr18	52700147	52700427	(27672858)	+	(CACACA)n	Simple_repeat	1	282	(0)	1758827
14	26.0	0.0	0.0	chr18	54269571	54269611	(26103674)	+	(GAC)n	Simple_repeat	1	41	(0)	1761009
16	21.6	0.0	0.0	chr18	54358082	54358113	(26015172)	+	(T)n	Simple_repeat	1	32	(0)	1761121
273	31.5	12.7	6.8	chr18	54607450	54607628	(25765657)	+	L2b	LINE/L2	3180	3375	(0)	1761484
209	31.8	2.2	2.2	chr18	54608180	54608269	(25765016)	+	MIR3	SINE/MIR	86	175	(33)	1761486
22	13.0	0.0	0.0	chr18	54828793	54828826	(25544459)	+	(TG)n	Simple_repeat	1	34	(0)	1761828
20	12.1	4.3	2.0	chr18	57354575	57354621	(23018664)	+	A-rich	Low_complexity	1	49	(0)	1765457
15	27.2	0.0	6.7	chr18	58671348	58671422	(21701863)	+	(GCCCC)n	Simple_repeat	1	75	(0)	1767638
653	17.7	5.4	5.4	chr18	58847861	58848045	(21525240)	C	MamRep605	LTR?	(608)	241	57	1768005
13	20.4	2.4	2.4	chr18	59359415	59359455	(21013830)	+	G-rich	Low_complexity	1	42	(0)	1768822
11	15.8	6.5	4.1	chr18	59899637	59899682	(20473603)	+	(CCACTC)n	Simple_repeat	1	49	(0)	1769752
17	3.2	0.0	10.3	chr18	59899887	59899925	(20473360)	+	(GCGGG)n	Simple_repeat	1	39	(0)	1769753
12	12.5	0.0	3.6	chr18	61333547	61333574	(19039711)	+	(GGCAG)n	Simple_repeat	1	28	(0)	1771767
937	16.4	0.0	0.8	chr18	61607121	61607254	(18766031)	C	FLAM_C	SINE/Alu	(10)	133	1	1772184
296	25.8	8.8	8.2	chr18	61637130	61637264	(18736021)	+	MER103C	DNA/hAT-Charlie	108	243	(54)	1772232
12	26.3	0.0	5.5	chr18	62522379	62522433	(17850852)	+	G-rich	Low_complexity	1	55	(0)	1773598
953	20.4	0.6	0.0	chr18	62752077	62752238	(17621047)	C	FRAM	SINE/Alu	(11)	165	3	1773989
588	10.8	2.4	0.0	chr18	63022788	63022870	(17350415)	C	AluJo	SINE/Alu	(227)	85	1	1774423
1203	20.9	0.8	4.1	chr18	63022871	63023140	(17350145)	C	L1MB4	LINE/L1	(348)	5832	5572	1774424
43	4.2	2.0	0.0	chr18	63320691	63320739	(17052546)	+	(GT)n	Simple_repeat	1	50	(0)	1774870
812	22.5	12.5	2.4	chr18	72691493	72692104	(7681181)	C	L1M4	LINE/L1	(508)	5671	4972	1787571
346	19.2	0.0	0.0	chr18	72692108	72692185	(7681100)	+	MER61A	LTR/ERV1	1	78	(263)	1787572
1722	12.0	0.3	8.8	chr18	72692235	72692553	(7680732)	+	MER61A	LTR/ERV1	48	339	(2)	1787572
1436	24.3	20.9	1.6	chr18	74280905	74281741	(6091544)	C	L2a	LINE/L2	(562)	2857	1817	1789673
578	35.1	3.9	2.6	chr18	74282598	74282919	(6090366)	C	L2b	LINE/L2	(299)	3127	2797	1789678
175	34.8	0.1	0.3	chr18	74622725	74623382	(5749903)	+	(GTGT)n	Simple_repeat	1	659	(0)	1790149
20	39.8	0.0	0.0	chr18	75273902	75273991	(5099294)	+	(CA)n	Simple_repeat	1	90	(0)	1790812
515	32.2	8.3	4.4	chr18	76064894	76065580	(4307705)	+	L2a	LINE/L2	2703	3421	(5)	1791735
20	26.5	1.4	1.4	chr18	76496122	76496190	(3877095)	+	G-rich	Low_complexity	1	70	(0)	1792187
12	10.7	6.1	2.9	chr18	76802268	76802300	(3570985)	+	(GGAGCT)n	Simple_repeat	1	35	(0)	1792671
32	0.0	0.0	0.0	chr18	77133320	77133349	(3239936)	+	(CTGGGAG)n	Simple_repeat	1	30	(0)	1793104
12	23.6	0.0	9.2	chr18	79069339	79069403	(1303882)	+	G-rich	Low_complexity	1	65	(0)	1795141
18	38.9	0.0	4.1	chr18	79797416	79797562	(575723)	+	(TGTATG)n	Simple_repeat	1	147	(0)	1795787
12	7.4	0.0	11.1	chr18	79797662	79797697	(575588)	+	(TGTGAG)n	Simple_repeat	1	36	(0)	1795788
12	22.5	2.3	2.3	chr18	79797884	79797926	(575359)	+	G-rich	Low_complexity	1	44	(0)	1795789
32	0.0	0.0	0.0	chr19	267223	267252	(58350364)	+	(CGCTG)n	Simple_repeat	1	30	(0)	1796658
2366	7.3	2.3	0.0	chr19	267692	267992	(58349624)	+	AluSp	SINE/Alu	3	310	(3)	1796659
28	23.0	6.9	4.1	chr19	489272	489430	(58128186)	+	(CCCCGAC)n	Simple_repeat	1	170	(0)	1797014
17	2.4	10.4	5.7	chr19	591577	591624	(58025992)	+	(GTGAGGT)n	Simple_repeat	1	53	(0)	1797193
194	22.6	20.8	1.2	chr19	661903	661987	(57955629)	+	MIR3	SINE/MIR	62	167	(41)	1797310
2367	7.8	0.7	0.3	chr19	664634	664940	(57952676)	C	AluSx	SINE/Alu	(4)	308	1	1797319
238	26.1	2.8	0.0	chr19	665163	665231	(57952385)	+	MIRb	SINE/MIR	49	119	(149)	1797320
750	14.3	0.0	10.0	chr19	1064676	1064815	(57552801)	+	AluJr	SINE/Alu	78	203	(109)	1798163
258	29.4	4.8	1.1	chr19	1174393	1174528	(57443088)	+	MIR	SINE/MIR	30	174	(56)	1798319
2259	12.9	0.0	0.0	chr19	1174662	1174972	(57442644)	+	AluSx1	SINE/Alu	2	312	(0)	1798320
11	17.5	0.0	5.6	chr19	1248446	1248481	(57369135)	+	G-rich	Low_complexity	1	36	(0)	1798463
19	12.8	0.0	0.0	chr19	1248491	1248524	(57369092)	+	(CCGC)n	Simple_repeat	1	34	(0)	1798464
12	22.4	1.9	5.7	chr19	1248809	1248860	(57368756)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1798465
29	3.2	0.0	0.0	chr19	1275918	1275949	(57341667)	+	(CCCT)n	Simple_repeat	1	32	(0)	1798488
1538	10.5	15.4	0.0	chr19	1354144	1354390	(57263226)	+	AluSx	SINE/Alu	6	297	(15)	1798670
671	1.4	0.0	0.0	chr19	1383362	1383434	(57234182)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1798705
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
307	25.0	19.4	0.0	chr19	1445568	1445671	(57171945)	+	L2c	LINE/L2	3288	3423	(3)	1798791
186	35.1	0.0	0.0	chr19	1445693	1445769	(57171847)	+	L2b	LINE/L2	3297	3373	(2)	1798792
180	26.8	1.8	0.0	chr19	1605069	1605124	(57012492)	C	MIR1_Amn	SINE/MIR	(60)	170	114	1799128
16	22.0	0.0	3.9	chr19	1605463	1605513	(57012103)	+	(GCGCGG)n	Simple_repeat	1	51	(0)	1799129
15	13.9	0.0	0.0	chr19	1605494	1605517	(57012099)	+	(G)n	Simple_repeat	1	24	(0)	1799130
193	27.0	5.1	3.9	chr19	1671961	1672037	(56945579)	C	MIR1_Amn	SINE/MIR	(66)	164	87	1799253
2290	8.7	0.0	0.0	chr19	2163085	2163373	(56454243)	C	AluSx1	SINE/Alu	(23)	289	1	1800270
957	6.9	0.0	0.0	chr19	2163376	2163491	(56454125)	C	AluSp	SINE/Alu	(197)	116	1	1800271
21	19.8	0.0	0.0	chr19	2163757	2163802	(56453814)	+	(CGTG)n	Simple_repeat	1	46	(0)	1800272
17	27.5	1.3	4.0	chr19	2163789	2163863	(56453753)	+	G-rich	Low_complexity	1	76	(0)	1800273
1822	13.6	4.6	1.0	chr19	2237136	2237429	(56380187)	+	AluJr	SINE/Alu	1	305	(7)	1800384
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
20	8.0	0.0	0.0	chr19	2391363	2391389	(56226227)	+	(T)n	Simple_repeat	1	27	(0)	1800692
36	35.0	0.8	0.0	chr19	2391493	2391619	(56225997)	+	(GT)n	Simple_repeat	1	128	(0)	1800693
2141	13.0	0.0	1.3	chr19	2391739	2392037	(56225579)	C	AluSz	SINE/Alu	(13)	299	5	1800694
15	24.9	3.1	3.0	chr19	2425247	2425311	(56192305)	+	G-rich	Low_complexity	1	67	(0)	1800779
12	12.4	0.0	6.5	chr19	2425324	2425354	(56192262)	+	(CCCG)n	Simple_repeat	1	31	(0)	1800780
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
864	4.9	0.0	0.0	chr19	2474432	2474533	(56143083)	C	AluSx	SINE/Alu	(210)	102	1	1800889
12	11.1	0.0	8.6	chr19	2474535	2474569	(56143047)	+	(ATTTAA)n	Simple_repeat	1	35	(0)	1800890
224	35.2	6.1	2.1	chr19	2475041	2475182	(56142434)	+	MIRb	SINE/MIR	112	259	(9)	1800891
969	15.3	0.0	0.7	chr19	2587726	2587869	(56029747)	+	AluSx3	SINE/Alu	167	309	(2)	1801168
35	6.8	2.9	5.6	chr19	2587870	2587953	(56029663)	+	GA-rich	Low_complexity	1	81	(0)	1801169
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
2203	11.5	0.0	0.0	chr19	2840491	2840786	(55776830)	C	AluSx1	SINE/Alu	(16)	296	1	1801761
18	30.6	3.9	1.9	chr19	3868848	3868950	(54748666)	+	(GGCTGG)n	Simple_repeat	1	107	(0)	1804194
22	27.1	1.1	4.2	chr19	3869029	3869056	(54748560)	+	(CCCCGCG)n	Simple_repeat	1	75	(21)	1804195
13	26.1	4.9	1.6	chr19	3869057	3869117	(54748499)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1804196
22	27.1	1.1	4.2	chr19	3869118	3869123	(54748493)	+	(CCCCGCG)n	Simple_repeat	76	96	(0)	1804195
2182	10.1	3.4	0.0	chr19	3876761	3877047	(54740569)	+	AluSx1	SINE/Alu	1	297	(15)	1804223
2246	11.6	0.0	0.0	chr19	4041766	4042066	(54575550)	C	AluJb	SINE/Alu	(11)	301	1	1804603
1470	28.4	11.9	2.4	chr19	4042067	4042077	(54575539)	+	L1MB8	LINE/L1	6156	6166	(12)	1804599
267	25.6	3.5	0.0	chr19	4173320	4173409	(54444207)	C	MIR3	SINE/MIR	(53)	155	64	1804947
251	28.4	0.8	0.3	chr19	4197343	4198009	(54419607)	+	(AATG)n	Simple_repeat	1	672	(0)	1805012
14	20.6	6.2	5.8	chr19	4198298	4198378	(54419238)	+	G-rich	Low_complexity	1	86	(0)	1805013
23	37.4	0.0	0.0	chr19	5048280	5048364	(53569252)	+	(GT)n	Simple_repeat	1	85	(0)	1807139
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
2261	13.4	0.0	0.6	chr19	5403722	5404035	(53213581)	+	AluSx	SINE/Alu	1	312	(0)	1807888
16	3.2	5.6	5.3	chr19	5404039	5404104	(53213512)	+	(AAAGA)n	Simple_repeat	1	66	(0)	1807889
22	28.0	4.7	0.0	chr19	5404105	5404120	(53213496)	+	GA-rich	Low_complexity	4	89	(0)	1807890
1865	16.8	2.0	0.0	chr19	5791398	5791695	(52825921)	C	AluJr	SINE/Alu	(8)	304	1	1808845
36	7.2	0.0	0.0	chr19	5802676	5802719	(52814897)	+	(GT)n	Simple_repeat	1	44	(0)	1808884
37	0.0	0.0	0.0	chr19	5802767	5802798	(52814818)	+	(GT)n	Simple_repeat	1	32	(0)	1808884
2281	7.5	4.6	0.3	chr19	5803023	5803314	(52814302)	+	AluSc	SINE/Alu	1	305	(4)	1808885
361	22.7	13.1	0.2	chr19	5803483	5803618	(52813998)	C	MIR	SINE/MIR	(15)	253	81	1808886
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
204	34.3	6.2	1.9	chr19	5892844	5892950	(52724666)	C	MIR	SINE/MIR	(113)	149	38	1809085
28	0.0	0.0	0.0	chr19	6279885	6279910	(52337706)	+	(CGC)n	Simple_repeat	1	26	(0)	1809796
15	12.0	0.0	0.0	chr19	6279913	6279939	(52337677)	+	(CCCG)n	Simple_repeat	1	27	(0)	1809797
29	0.0	0.0	0.0	chr19	6464402	6464429	(52153187)	+	(CCCGT)n	Simple_repeat	1	28	(0)	1810307
192	26.3	1.3	5.9	chr19	6586929	6587548	(52030068)	+	GA-rich	Low_complexity	110	754	(0)	1810652
2203	22.3	7.1	1.3	chr19	6587557	6587714	(52029902)	+	MER54A	LTR/ERVL	334	512	(389)	1810655
22	30.0	2.2	1.1	chr19	7294260	7294288	(51323328)	+	G-rich	Low_complexity	1	54	(39)	1812537
14	14.7	0.0	7.0	chr19	7294289	7294331	(51323285)	+	(GGCGGCG)n	Simple_repeat	1	43	(0)	1812538
22	30.0	2.2	1.1	chr19	7294332	7294350	(51323266)	+	G-rich	Low_complexity	55	93	(0)	1812537
14	15.8	2.7	2.6	chr19	7294486	7294522	(51323094)	+	(CCGC)n	Simple_repeat	1	38	(0)	1812539
239	32.5	0.0	1.1	chr19	7500631	7500717	(51116899)	+	L2b	LINE/L2	3265	3350	(25)	1813085
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
16	0.0	0.0	0.0	chr19	7636699	7636718	(50980898)	+	(GCT)n	Simple_repeat	1	20	(0)	1813386
392	36.9	0.7	1.7	chr19	7841995	7843835	(50773781)	+	(GT)n	Simple_repeat	1	1854	(0)	1813848
180	35.2	3.3	0.0	chr19	7853528	7853615	(50764001)	C	L2a	LINE/L2	(66)	3360	3270	1813860
181	24.4	4.2	3.2	chr19	7853673	7853765	(50763851)	C	L2a	LINE/L2	(339)	3080	2987	1813860
2401	11.6	0.0	0.0	chr19	7854001	7854311	(50763305)	+	AluSz	SINE/Alu	2	312	(0)	1813861
16	25.5	2.0	0.0	chr19	7916385	7916439	(50701177)	+	(CCGCC)n	Simple_repeat	1	56	(0)	1813972
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
1851	17.1	4.2	0.3	chr19	8120478	8120776	(50496840)	C	AluJr	SINE/Alu	(1)	311	1	1814444
192	35.2	9.4	3.1	chr19	8120810	8120938	(50496678)	+	L2b	LINE/L2	3236	3373	(2)	1814445
12	22.0	4.8	4.5	chr19	8444846	8444908	(50172708)	+	G-rich	Low_complexity	1	66	(0)	1815352
14	26.3	0.0	0.0	chr19	8445001	8445041	(50172575)	+	(GGC)n	Simple_repeat	1	41	(0)	1815353
12	13.2	5.7	2.7	chr19	8580488	8580522	(50037094)	+	G-rich	Low_complexity	1	37	(0)	1815640
695	18.7	0.0	5.0	chr19	8581110	8581276	(50036340)	C	FLAM_A	SINE/Alu	(0)	142	1	1815641
29	0.0	0.0	0.0	chr19	8610423	8610447	(50007169)	+	(AC)n	Simple_repeat	1	25	(0)	1815706
430	25.0	6.0	2.1	chr19	9140307	9140449	(49477167)	+	LTR33B	LTR/ERVL	77	225	(278)	1816898
202	22.7	8.5	11.0	chr19	9140769	9140877	(49476739)	C	L2	LINE/L2	(1379)	2040	1935	1816899
1523	19.1	1.0	0.7	chr19	9793373	9793670	(48823946)	C	AluJo	SINE/Alu	(13)	299	1	1818116
23	22.3	3.5	0.0	chr19	9847135	9847192	(48770424)	+	(CA)n	Simple_repeat	1	60	(0)	1818263
23	11.0	2.4	2.4	chr19	9847688	9847728	(48769888)	+	(GT)n	Simple_repeat	1	42	(0)	1818264
15	28.7	1.9	1.9	chr19	9935758	9935810	(48681806)	+	(CA)n	Simple_repeat	1	54	(0)	1818497
2400	8.2	0.3	0.3	chr19	9937345	9937648	(48679968)	+	AluSq2	SINE/Alu	1	304	(9)	1818499
3061	12.1	11.1	3.8	chr19	9937801	9938034	(48679582)	C	MER41E	LTR/ERV1	(0)	595	367	1818500
347	26.5	1.0	3.1	chr19	10028025	10028144	(48589472)	+	MIR	SINE/MIR	45	168	(100)	1818727
13	11.1	3.2	3.1	chr19	10096519	10096549	(48521067)	+	(CAG)n	Simple_repeat	1	32	(0)	1818889
255	32.3	5.7	2.0	chr19	10270728	10270828	(48346788)	+	MIR	SINE/MIR	117	221	(41)	1819334
14	16.4	4.4	4.3	chr19	10296362	10296406	(48321210)	+	(GGC)n	Simple_repeat	1	47	(0)	1819382
23	21.0	2.5	4.9	chr19	10296503	10296581	(48321035)	+	(GGC)n	Simple_repeat	1	81	(0)	1819383
15	17.6	0.0	4.8	chr19	10432090	10432131	(48185485)	+	G-rich	Low_complexity	1	42	(0)	1819725
20	20.6	3.1	3.0	chr19	10432452	10432516	(48185100)	+	(GCCCCG)n	Simple_repeat	1	67	(0)	1819726
354	34.2	6.7	3.7	chr19	10586877	10587064	(48030552)	C	MIR	SINE/MIR	(13)	249	56	1820170
157	28.6	1.1	0.2	chr19	10587498	10587944	(48029672)	+	(CATT)n	Simple_repeat	1	452	(0)	1820171
17	15.1	2.0	5.9	chr19	10602403	10602452	(48015164)	+	G-rich	Low_complexity	1	51	(0)	1820226
245	31.9	2.1	3.2	chr19	10625191	10625284	(47992332)	+	MIR3	SINE/MIR	54	146	(62)	1820298
18	20.5	1.9	1.9	chr19	10654293	10654344	(47963272)	+	(CCCG)n	Simple_repeat	1	53	(0)	1820365
14	13.0	0.0	7.7	chr19	10654426	10654464	(47963152)	+	(CGG)n	Simple_repeat	1	39	(0)	1820366
12	22.0	4.8	0.0	chr19	10654506	10654547	(47963069)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	1820367
216	35.6	3.8	0.0	chr19	10701796	10701896	(47915720)	C	L2b	LINE/L2	(6)	3369	3265	1820456
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
16	8.5	0.0	0.0	chr19	10960669	10960693	(47656923)	+	(CCG)n	Simple_repeat	1	25	(0)	1821123
36	28.3	3.0	4.8	chr19	10960847	10961046	(47656570)	+	G-rich	Low_complexity	1	206	(0)	1821124
2110	6.8	4.5	0.4	chr19	11089873	11090150	(47527466)	C	AluSx1	SINE/Alu	(22)	290	1	1821402
14	19.8	0.0	4.5	chr19	11090388	11090431	(47527185)	+	(GCCCCC)n	Simple_repeat	1	44	(0)	1821403
202	28.9	3.1	0.9	chr19	11155406	11155527	(47462089)	C	MIR1_Amn	SINE/MIR	(79)	189	63	1821596
756	25.3	7.3	2.7	chr19	11339831	11340053	(47277563)	+	MIR	SINE/MIR	5	238	(24)	1822091
788	27.9	8.0	5.8	chr19	11369336	11369667	(47247949)	C	L2a	LINE/L2	(237)	3189	2820	1822144
2343	10.5	0.0	0.3	chr19	11369989	11370294	(47247322)	+	AluSq2	SINE/Alu	1	305	(8)	1822154
17	23.6	0.0	5.0	chr19	11479502	11479561	(47138055)	+	G-rich	Low_complexity	1	60	(0)	1822439
15	17.4	2.4	2.4	chr19	11479758	11479798	(47137818)	+	G-rich	Low_complexity	1	42	(0)	1822440
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
1583	12.8	3.3	0.8	chr19	11528259	11528493	(47089123)	C	AluJo	SINE/Alu	(19)	293	53	1822566
712	28.3	19.4	3.9	chr19	11528494	11528683	(47088933)	+	L2a	LINE/L2	3206	3421	(5)	1822561
327	26.1	2.5	3.4	chr19	11988139	11988257	(46629359)	C	MER57E3	LTR/ERV1	(6)	481	364	1823529
459	24.8	0.8	2.3	chr19	12052320	12052449	(46565167)	+	MER57E3	LTR/ERV1	360	487	(0)	1823660
11	19.5	3.9	5.6	chr19	12484382	12484433	(46133183)	+	G-rich	Low_complexity	1	54	(0)	1824522
278	27.5	12.1	0.8	chr19	12723377	12723508	(45894108)	+	MIR	SINE/MIR	8	156	(106)	1825079
2492	6.1	1.3	0.6	chr19	12734856	12735166	(45882450)	C	AluSp	SINE/Alu	(0)	313	1	1825107
35	28.5	2.0	3.3	chr19	12833820	12833883	(45783733)	+	(CCG)n	Simple_repeat	1	104	(47)	1825326
29	8.4	0.0	5.4	chr19	12833884	12833940	(45783676)	+	(CTCCTCC)n	Simple_repeat	1	53	(0)	1825327
35	28.5	2.0	3.3	chr19	12833941	12833967	(45783649)	+	(CCG)n	Simple_repeat	105	151	(0)	1825326
343	4.4	0.0	0.0	chr19	12884797	12884841	(45732775)	C	LTR7B	LTR/ERV1	(0)	464	420	1825448
449	15.3	0.0	1.2	chr19	12885149	12885234	(45732382)	+	MER96	DNA/hAT-Tip100	3	87	(88)	1825449
2498	7.1	0.3	0.0	chr19	12918672	12918980	(45698636)	+	AluSg	SINE/Alu	1	310	(0)	1825529
15	17.7	1.7	8.2	chr19	12946025	12946084	(45671532)	+	G-rich	Low_complexity	1	61	(0)	1825594
13	18.3	2.6	2.5	chr19	12957099	12957137	(45660479)	+	(CCGCGG)n	Simple_repeat	1	40	(0)	1825617
40	6.6	0.0	0.0	chr19	13023061	13023108	(45594508)	+	(TC)n	Simple_repeat	1	48	(0)	1825767
18	14.7	0.0	0.0	chr19	13023167	13023196	(45594420)	+	(GA)n	Simple_repeat	1	30	(0)	1825768
18	12.2	0.0	0.0	chr19	13023241	13023267	(45594349)	+	(CA)n	Simple_repeat	1	27	(0)	1825769
29	23.1	1.2	2.3	chr19	13023271	13023355	(45594261)	+	(CCCT)n	Simple_repeat	1	86	(0)	1825770
12	23.1	2.3	2.3	chr19	13023552	13023594	(45594022)	+	G-rich	Low_complexity	1	44	(0)	1825771
12	17.2	2.2	6.5	chr19	13151788	13151832	(45465784)	+	(CCCGCCG)n	Simple_repeat	1	46	(0)	1825985
208	31.9	11.2	2.5	chr19	13162554	13162740	(45454876)	C	MIR	SINE/MIR	(49)	219	7	1826009
601	29.1	9.1	0.8	chr19	13442130	13442392	(45175224)	C	LTR16C	LTR/ERVL	(24)	465	179	1826786
140	36.8	0.6	1.4	chr19	13934536	13935161	(44682455)	+	(TG)n	Simple_repeat	1	630	(0)	1828153
2043	13.1	1.0	1.3	chr19	14174838	14175142	(44442474)	C	AluJr	SINE/Alu	(8)	304	1	1828747
193	27.9	4.7	0.0	chr19	14175143	14175203	(44442413)	C	L2b	LINE/L2	(773)	2646	2583	1828745
36	25.6	2.7	3.9	chr19	14248619	14248767	(44368849)	+	(CCCT)n	Simple_repeat	1	153	(0)	1828949
14	18.2	2.6	2.5	chr19	14518366	14518404	(44099212)	+	(CCG)n	Simple_repeat	1	40	(0)	1829698
2061	10.1	2.7	0.0	chr19	14572472	14572758	(44044858)	C	AluSx1	SINE/Alu	(17)	295	1	1829824
1964	12.0	1.8	0.0	chr19	15333078	15333351	(43284265)	C	AluJo	SINE/Alu	(32)	280	2	1831592
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
47	0.0	0.0	0.0	chr19	17246433	17246472	(41371144)	+	(AC)n	Simple_repeat	1	40	(0)	1835834
204	23.9	2.1	0.0	chr19	17246881	17246926	(41370690)	C	L2b	LINE/L2	(11)	3364	3318	1835835
15	13.2	0.0	5.4	chr19	17303053	17303089	(41314527)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	1835982
199	13.9	12.2	0.0	chr19	17306083	17306125	(41311491)	C	MIRc	SINE/MIR	(136)	132	84	1835990
293	34.5	9.0	4.4	chr19	17488403	17488763	(41128853)	+	L2b	LINE/L2	2920	3298	(77)	1836495
309	27.5	22.9	0.0	chr19	17706425	17706602	(40911014)	C	MIR	SINE/MIR	(19)	243	13	1837064
507	27.2	15.0	2.4	chr19	17706938	17707322	(40910294)	+	L2b	LINE/L2	2915	3373	(2)	1837065
1564	18.1	4.9	0.0	chr19	17865327	17865597	(40752019)	+	AluJr	SINE/Alu	12	296	(16)	1837468
266	26.7	12.2	0.0	chr19	17865635	17865735	(40751881)	+	MLT1J	LTR/ERVL-MaLR	253	367	(145)	1837469
214	29.8	7.5	5.3	chr19	17865921	17866051	(40751565)	+	MIRb	SINE/MIR	104	237	(31)	1837470
296	31.3	2.2	2.2	chr19	17950214	17950347	(40667269)	C	L2b	LINE/L2	(221)	3154	3021	1837700
15	19.5	0.0	7.4	chr19	18109891	18109944	(40507672)	+	G-rich	Low_complexity	1	54	(0)	1838132
18	17.7	0.0	0.0	chr19	18110202	18110239	(40507377)	+	(CGTC)n	Simple_repeat	1	38	(0)	1838133
12	26.8	0.0	0.0	chr19	18255254	18255293	(40362323)	+	(CAGCAG)n	Simple_repeat	1	40	(0)	1838480
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
255	0.0	0.0	0.0	chr19	18288250	18288280	(40329336)	C	MIR	SINE/MIR	(119)	143	113	1838544
16	24.4	1.6	4.7	chr19	18323042	18323104	(40294512)	+	(CGC)n	Simple_repeat	1	64	(0)	1838616
11	16.9	2.9	2.8	chr19	18388462	18388496	(40229120)	+	(GCGCCT)n	Simple_repeat	1	36	(0)	1838793
13	11.7	3.6	0.0	chr19	18522100	18522127	(40095489)	+	(CGCCA)n	Simple_repeat	1	29	(0)	1839004
13	8.9	0.0	3.9	chr19	18572093	18572118	(40045498)	+	(GCCT)n	Simple_repeat	1	26	(0)	1839154
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
12	27.7	3.1	3.0	chr19	18788953	18788962	(39828654)	+	(CACCTCC)n	Simple_repeat	1	63	(0)	1839552
13	10.3	3.9	9.4	chr19	18788963	18789013	(39828603)	+	(CCTCCT)n	Simple_repeat	1	53	(0)	1839553
231	19.4	6.9	1.5	chr19	18986837	18986904	(39630712)	+	HAL1M8	LINE/L1	1607	1678	(1313)	1840014
250	19.2	0.0	0.0	chr19	18987050	18987101	(39630515)	+	MER4-int	LTR/ERV1	1111	1162	(5436)	1840015
1091	15.9	2.6	3.6	chr19	18987432	18987626	(39629990)	C	AluJr	SINE/Alu	(34)	278	86	1840016
309	28.0	0.3	0.5	chr19	19034117	19034210	(39583406)	C	L2b	LINE/L2	(0)	3426	3306	1840113
209	30.3	3.3	3.3	chr19	19191934	19192025	(39425591)	C	MIR3	SINE/MIR	(116)	92	1	1840465
227	35.5	4.2	3.7	chr19	19214940	19215103	(39402513)	+	MIR3	SINE/MIR	3	167	(41)	1840517
645	31.4	10.2	2.0	chr19	19319737	19319976	(39297640)	+	L2a	LINE/L2	3160	3426	(0)	1840753
20	15.8	5.0	3.2	chr19	19628804	19628863	(38988753)	+	(CCCTG)n	Simple_repeat	1	63	(0)	1841332
1726	12.8	0.3	17.4	chr19	20103008	20103422	(38514194)	C	LTR14B	LTR/ERVK	(0)	608	1	1842097
1833	12.1	3.1	4.7	chr19	23273428	23273725	(35343891)	+	AluSz	SINE/Alu	1	293	(19)	1846448
2208	20.3	2.7	2.9	chr19	23273726	23273754	(35343862)	+	MER57E3	LTR/ERV1	459	481	(6)	1846447
387	27.6	4.6	2.0	chr19	29605758	29605913	(29011703)	C	MIR3	SINE/MIR	(52)	156	1	1850483
14	17.6	0.0	4.8	chr19	29942570	29942632	(28674984)	+	(CGCCCCC)n	Simple_repeat	1	60	(0)	1851207
613	12.9	2.5	11.6	chr19	29943135	29943278	(28674338)	C	FLAM_C	SINE/Alu	(26)	276	2	1851208
12	11.5	10.0	2.3	chr19	30227662	30227701	(28389915)	+	(GCGA)n	Simple_repeat	1	44	(0)	1851577
19	4.0	0.0	0.0	chr19	30227737	30227762	(28389854)	+	(GCC)n	Simple_repeat	1	26	(0)	1851578
23	16.4	0.0	0.0	chr19	30228034	30228076	(28389540)	+	(GTGT)n	Simple_repeat	1	43	(0)	1851579
43	0.0	0.0	0.0	chr19	30264931	30264967	(28352649)	+	(GT)n	Simple_repeat	1	37	(0)	1851629
18	4.5	0.0	0.0	chr19	30264968	30264990	(28352626)	+	(AG)n	Simple_repeat	1	23	(0)	1851630
12	15.7	2.6	5.0	chr19	30373911	30373949	(28243667)	+	(CCCAGC)n	Simple_repeat	1	40	(0)	1851766
15	9.7	0.0	0.0	chr19	30686421	30686442	(27931174)	+	(TG)n	Simple_repeat	1	22	(0)	1852185
18	14.7	0.0	0.0	chr19	31818914	31818943	(26798673)	+	(GT)n	Simple_repeat	1	30	(0)	1853802
16	9.3	0.0	0.0	chr19	31819132	31819154	(26798462)	+	(TG)n	Simple_repeat	1	23	(0)	1853803
2237	11.6	0.0	0.3	chr19	31819227	31819529	(26798087)	+	AluSx1	SINE/Alu	1	302	(10)	1853804
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
2024	23.3	4.8	7.6	chr19	32719307	32719544	(25898072)	C	LTR8	LTR/ERV1	(475)	216	2	1855368
132	29.9	3.0	4.3	chr19	32720117	32720840	(25896776)	+	(CCCACC)n	Simple_repeat	1	746	(0)	1855371
325	26.2	10.5	0.7	chr19	33767821	33767966	(24849650)	+	MamRep1879	DNA/hAT-Tip100?	51	212	(4)	1857283
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
215	31.0	15.9	2.8	chr19	34254089	34254267	(24363349)	+	L2a	LINE/L2	3198	3404	(22)	1858248
29	18.4	5.3	7.6	chr19	34254583	34254771	(24362845)	+	G-rich	Low_complexity	1	184	(0)	1858260
13	24.5	2.3	0.0	chr19	34481854	34481896	(24135720)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	1858733
14	31.3	1.1	5.2	chr19	34482451	34482545	(24135071)	+	(CCTGCCC)n	Simple_repeat	1	96	(0)	1858734
13	15.9	2.6	2.6	chr19	34482971	34482992	(24134624)	+	(TTC)n	Simple_repeat	1	21	(0)	1858735
1966	13.0	0.3	6.0	chr19	34482993	34483323	(24134293)	C	AluJb	SINE/Alu	(0)	312	1	1858736
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
928	15.7	2.4	0.1	chr19	34973115	34973285	(23644331)	C	MLT1E3	LTR/ERVL-MaLR	(8)	616	372	1859418
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
783	18.9	1.8	6.1	chr19	34973560	34973603	(23644013)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1859420
56	0.0	0.0	0.0	chr19	34973604	34973651	(23643965)	+	(GT)n	Simple_repeat	1	48	(0)	1859421
2231	8.5	0.3	0.0	chr19	34973652	34973934	(23643682)	C	AluSx1	SINE/Alu	(28)	284	1	1859422
243	31.6	6.5	2.0	chr19	34999501	34999657	(23617959)	+	MIRb	SINE/MIR	8	168	(100)	1859479
2157	10.2	0.0	0.0	chr19	35250793	35251067	(23366549)	C	AluSz	SINE/Alu	(9)	303	29	1860021
12	15.9	9.5	0.0	chr19	35797699	35797740	(22819876)	+	G-rich	Low_complexity	1	46	(0)	1861159
432	27.7	5.7	2.9	chr19	35797947	35798117	(22819499)	+	L2b	LINE/L2	3185	3360	(15)	1861160
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
691	29.5	10.1	0.7	chr19	35829069	35829372	(22788244)	+	MLT1K	LTR/ERVL-MaLR	12	347	(248)	1861262
13	14.8	2.4	4.8	chr19	35995120	35995160	(22622456)	+	(GAGGCGG)n	Simple_repeat	1	42	(0)	1861643
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
14	20.0	0.0	5.8	chr19	36667250	36667260	(21950356)	+	(ATTT)n	Simple_repeat	1	11	(0)	1863007
1895	4.3	14.7	0.0	chr19	36667261	36667515	(21950101)	+	AluSp	SINE/Alu	1	299	(14)	1863008
41	2.6	0.0	0.0	chr19	36838107	36838146	(21779470)	+	(CA)n	Simple_repeat	1	40	(0)	1863352
320	20.9	2.9	0.0	chr19	36850363	36850429	(21767187)	C	MER67D	LTR/ERV1	(1)	513	445	1863382
711	18.1	11.3	3.1	chr19	36850413	36850663	(21766953)	C	MER31B	LTR/ERV1	(74)	392	1	1863383
949	24.6	3.8	0.7	chr19	37217404	37217682	(21399934)	C	L1MB7	LINE/L1	(0)	6184	5897	1864045
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
390	26.8	0.0	1.0	chr19	38319451	38319548	(20298068)	C	MER91A	DNA/hAT-Tip100	(75)	121	25	1866389
871	9.3	0.8	0.0	chr19	38832012	38832129	(19785487)	+	AluYc	SINE/Alu	181	299	(0)	1867545
13	21.9	0.0	2.6	chr19	38975822	38975860	(19641756)	+	(GCGG)n	Simple_repeat	1	39	(0)	1867893
688	10.8	0.8	0.2	chr19	39196518	39196866	(19420750)	C	MSR1	Satellite	(1)	351	1	1868507
17	22.8	3.5	1.7	chr19	39263875	39263932	(19353684)	+	(ACAG)n	Simple_repeat	1	60	(0)	1868697
43	0.0	0.0	0.0	chr19	39320306	39320342	(19297274)	+	(AC)n	Simple_repeat	1	37	(0)	1868830
16	17.1	3.0	0.0	chr19	39320466	39320498	(19297118)	+	(CA)n	Simple_repeat	1	34	(0)	1868831
15	8.6	7.7	2.4	chr19	39342130	39342180	(19275436)	+	(CGCCC)n	Simple_repeat	1	53	(0)	1868895
21	24.2	2.2	5.4	chr19	40513021	40513111	(18104505)	+	(GGC)n	Simple_repeat	1	93	(0)	1871282
448	27.1	16.4	0.0	chr19	40553842	40554029	(18063587)	+	MIR	SINE/MIR	15	239	(23)	1871399
27	5.5	0.0	0.0	chr19	40597140	40597177	(18020439)	+	(GGGCGG)n	Simple_repeat	1	38	(0)	1871496
19	31.5	0.0	3.5	chr19	40597254	40597298	(18020318)	+	(GCC)n	Simple_repeat	1	87	(0)	1871497
22	5.4	2.4	4.7	chr19	40597299	40597340	(18020276)	+	(CAGCCC)n	Simple_repeat	1	43	(0)	1871498
33	25.9	5.2	2.5	chr19	40614100	40614253	(18003363)	+	(CTCCT)n	Simple_repeat	1	162	(0)	1871515
30	0.0	0.0	0.0	chr19	40715846	40715871	(17901745)	+	(TG)n	Simple_repeat	1	26	(0)	1871775
193	30.9	11.8	0.0	chr19	40716067	40716163	(17901453)	+	MIR3	SINE/MIR	82	191	(17)	1871776
35	19.6	0.0	1.4	chr19	41218733	41218804	(17398812)	+	(TG)n	Simple_repeat	1	72	(0)	1872914
15	14.9	2.6	2.5	chr19	41218857	41218895	(17398721)	+	(GGCTGG)n	Simple_repeat	1	40	(0)	1872915
16	14.4	2.5	2.4	chr19	41218943	41218982	(17398634)	+	(CCAGAGC)n	Simple_repeat	1	41	(0)	1872916
1860	12.8	1.7	3.0	chr19	41226812	41227115	(17390501)	+	AluJb	SINE/Alu	1	300	(12)	1872926
272	29.1	13.0	1.5	chr19	42219825	42219960	(16397656)	C	MIRb	SINE/MIR	(18)	250	97	1874830
13	21.3	2.6	0.0	chr19	42283539	42283576	(16334040)	+	(AGTGTG)n	Simple_repeat	1	39	(0)	1874956
13	15.4	0.0	3.2	chr19	42284093	42284123	(16333493)	+	(GCAC)n	Simple_repeat	1	31	(0)	1874957
314	36.8	3.6	9.8	chr19	42323325	42323451	(16294165)	C	L2a	LINE/L2	(112)	3275	3147	1875029
22	26.5	2.5	5.7	chr19	42323848	42323967	(16293649)	+	(CCCCGC)n	Simple_repeat	1	123	(0)	1875031
12	12.8	5.6	2.6	chr19	42325733	42325768	(16291848)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1875034
590	11.6	1.6	0.5	chr19	42370345	42370655	(16246961)	C	MSR1	Satellite	(1)	314	1	1875127
738	16.8	12.3	0.0	chr19	43525641	43525789	(15091827)	C	MER96	DNA/hAT-Tip100	(0)	175	6	1877014
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
354	32.7	8.0	3.0	chr19	44071534	44071795	(14545821)	+	L2	LINE/L2	506	781	(2638)	1878151
191	32.2	9.4	0.0	chr19	44500820	44500934	(14116682)	C	MIRb	SINE/MIR	(12)	256	130	1878829
1391	9.7	0.0	0.0	chr19	44718144	44718318	(13899298)	C	AluSz6	SINE/Alu	(0)	312	138	1879422
252	25.3	0.1	4.7	chr19	44718410	44718503	(13899113)	C	MIRb	SINE/MIR	(127)	141	44	1879423
180	25.0	2.9	4.2	chr19	44718493	44718563	(13899053)	C	MIR3	SINE/MIR	(88)	120	51	1879424
19	29.8	1.5	0.0	chr19	44846535	44846601	(13771015)	+	(GCCGCT)n	Simple_repeat	1	68	(0)	1879788
20	15.0	0.0	0.0	chr19	44846570	44846606	(13771010)	+	(GCT)n	Simple_repeat	1	37	(0)	1879789
2377	7.7	1.6	0.0	chr19	44905087	44905384	(13712232)	C	AluSq	SINE/Alu	(10)	303	1	1879934
256	19.7	0.0	4.7	chr19	44905402	44905465	(13712151)	+	MSR1	Satellite	2	62	(49)	1879935
29	25.4	2.6	3.4	chr19	45076340	45076453	(13541163)	+	(GGCG)n	Simple_repeat	1	117	(0)	1880404
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
15	4.7	0.0	0.0	chr19	45152511	45152532	(13465084)	+	(CTG)n	Simple_repeat	1	22	(0)	1880570
13	24.2	2.3	0.0	chr19	45153862	45153905	(13463711)	+	(GAGAGGC)n	Simple_repeat	1	45	(0)	1880571
12	31.2	1.9	0.0	chr19	45153906	45153912	(13463704)	+	(GGCGA)n	Simple_repeat	2	53	(0)	1880572
195	25.3	6.2	5.2	chr19	45424059	45424154	(13193462)	C	L2b	LINE/L2	(9)	3366	3270	1881263
191	17.6	0.0	0.0	chr19	45456519	45456552	(13161064)	+	MIRc	SINE/MIR	125	158	(110)	1881363
1632	16.1	0.0	2.2	chr19	45456583	45456849	(13160767)	+	AluJr	SINE/Alu	43	303	(9)	1881364
12	16.3	7.0	2.2	chr19	45770291	45770333	(12847283)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	1882222
12	18.3	0.0	3.0	chr19	45770724	45770756	(12846860)	+	(CCCGCC)n	Simple_repeat	1	33	(0)	1882223
924	30.4	4.8	5.4	chr19	45862394	45862941	(12754675)	C	L2b	LINE/L2	(1)	3374	2823	1882441
16	0.0	0.0	0.0	chr19	45863114	45863133	(12754483)	+	(CCG)n	Simple_repeat	1	20	(0)	1882442
99	26.7	0.3	0.3	chr19	45958354	45958681	(12658935)	+	(TG)n	Simple_repeat	1	328	(0)	1882682
23	10.0	0.0	0.0	chr19	45972664	45972696	(12644920)	+	(CA)n	Simple_repeat	1	33	(0)	1882720
818	24.6	8.3	1.4	chr19	46009383	46009605	(12608011)	C	MIR	SINE/MIR	(3)	259	20	1882823
37	2.9	0.0	0.0	chr19	46009803	46009838	(12607778)	+	(TG)n	Simple_repeat	1	36	(0)	1882824
19	22.8	0.0	0.0	chr19	46009864	46009904	(12607712)	+	(TG)n	Simple_repeat	1	41	(0)	1882824
353	38.1	2.5	1.1	chr19	46412620	46412892	(12204724)	C	MamGyp-int	LTR/Gypsy	(4609)	494	218	1883595
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
1176	33.9	1.4	1.9	chr19	46470583	46471094	(12146522)	C	MamGyp-int	LTR/Gypsy	(4557)	546	38	1883748
292	27.2	7.2	0.0	chr19	46489892	46489994	(12127622)	C	L2a	LINE/L2	(2)	3373	3263	1883812
15	0.0	0.0	0.0	chr19	46717082	46717100	(11900516)	+	(CGG)n	Simple_repeat	1	19	(0)	1884379
29	0.0	0.0	3.1	chr19	47231234	47231265	(11386351)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1885601
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
34	21.6	3.3	0.0	chr19	47243283	47243373	(11374243)	+	(CCCGC)n	Simple_repeat	1	94	(0)	1885632
234	23.1	9.1	2.3	chr19	47391686	47391818	(11225798)	+	L2c	LINE/L2	3022	3164	(223)	1886065
2032	12.5	1.0	0.3	chr19	47391911	47392199	(11225417)	C	AluJr	SINE/Alu	(21)	291	1	1886066
36	28.8	5.8	0.6	chr19	47471853	47472024	(11145592)	+	GA-rich	Low_complexity	1	182	(0)	1886246
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
15	14.4	2.4	4.7	chr19	47608664	47608705	(11008911)	+	G-rich	Low_complexity	1	43	(0)	1886567
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
29	0.0	0.0	0.0	chr19	47820117	47820141	(10797475)	+	(GT)n	Simple_repeat	1	25	(0)	1887151
18	19.3	2.3	2.3	chr19	47820221	47820263	(10797353)	+	GA-rich	Low_complexity	1	44	(0)	1887152
69	0.0	1.6	0.0	chr19	47849623	47849684	(10767932)	+	(AG)n	Simple_repeat	1	63	(0)	1887235
935	18.1	0.6	0.0	chr19	47849932	47850091	(10767525)	+	AluJo	SINE/Alu	140	300	(12)	1887236
778	21.4	2.4	1.1	chr19	47850095	47850304	(10767312)	+	L1M4	LINE/L1	5181	5390	(783)	1887237
2289	8.6	0.3	5.2	chr19	48400784	48401110	(10216506)	+	AluSx	SINE/Alu	1	311	(1)	1888662
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
2419	7.6	0.0	0.7	chr19	48811212	48811514	(9806102)	+	AluSx1	SINE/Alu	2	302	(10)	1889666
298	21.0	6.9	1.2	chr19	48872685	48872766	(9744850)	C	MSR1	Satellite	(18)	93	7	1889835
388	23.8	0.0	2.4	chr19	48900397	48900652	(9716964)	C	MSR1	Satellite	(0)	249	1	1889899
245	24.0	1.3	2.6	chr19	48933823	48933899	(9683717)	C	MSR1	Satellite	(35)	76	1	1890003
4475	13.1	1.6	0.8	chr19	48933973	48934706	(9682910)	+	LTR5B	LTR/ERVK	1	740	(262)	1890004
220	29.2	20.4	0.0	chr19	49500209	49500321	(9117295)	C	MIRb	SINE/MIR	(122)	146	5	1891226
602	12.4	0.5	1.3	chr19	49512771	49513130	(9104486)	C	MSR1	Satellite	(7)	357	1	1891260
17	25.9	1.2	6.0	chr19	49556227	49556308	(9061308)	+	G-rich	Low_complexity	1	83	(0)	1891388
12	12.2	3.7	0.0	chr19	49557033	49557059	(9060557)	+	(CCCGC)n	Simple_repeat	1	28	(0)	1891389
232	22.6	2.6	0.0	chr19	49557280	49557344	(9060272)	C	MIR1_Amn	SINE/MIR	(92)	170	108	1891390
599	29.2	6.0	1.5	chr19	49557421	49557625	(9059991)	+	MIR	SINE/MIR	37	251	(11)	1891391
51	0.0	0.0	0.0	chr19	49659985	49660028	(8957588)	+	(AC)n	Simple_repeat	1	44	(0)	1891634
32	3.2	0.0	0.0	chr19	49660080	49660111	(8957505)	+	(AC)n	Simple_repeat	1	32	(0)	1891634
1846	13.9	10.6	0.3	chr19	49660214	49660517	(8957099)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1891635
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
1859	11.0	6.5	0.7	chr19	50026289	50026580	(8591036)	+	AluSx1	SINE/Alu	3	312	(0)	1892448
19	0.0	0.0	0.0	chr19	50312303	50312323	(8305293)	+	(TG)n	Simple_repeat	1	21	(0)	1893255
12	22.1	0.0	0.0	chr19	50312324	50312334	(8305282)	+	G-rich	Low_complexity	1	32	(0)	1893256
19	0.0	0.0	0.0	chr19	50607990	50608010	(8009606)	+	(A)n	Simple_repeat	1	21	(0)	1893906
15	0.0	0.0	0.0	chr19	50661740	50661756	(7955860)	+	(CA)n	Simple_repeat	1	17	(0)	1894037
15	9.3	0.0	9.5	chr19	50661891	50661932	(7955684)	+	(GTCAGAG)n	Simple_repeat	1	42	(0)	1894038
13	13.6	4.3	6.2	chr19	50725315	50725360	(7892256)	+	(GCCCA)n	Simple_repeat	1	48	(0)	1894171
272	26.4	8.3	8.7	chr19	51182242	51182482	(7435134)	+	L2a	LINE/L2	3128	3367	(59)	1895133
2290	8.7	0.0	0.0	chr19	51395173	51395481	(7222135)	C	AluSx1	SINE/Alu	(3)	309	1	1895540
465	33.9	4.2	3.4	chr19	51395509	51395746	(7221870)	+	MIRb	SINE/MIR	3	242	(26)	1895541
2238	4.7	1.0	2.7	chr19	51422388	51422685	(7194931)	C	AluY	SINE/Alu	(17)	294	2	1895589
207	25.8	3.1	1.6	chr19	51607907	51607969	(7009647)	+	MIR3	SINE/MIR	86	149	(59)	1895888
13	11.2	3.2	3.1	chr19	51719643	51719673	(6897943)	+	(GCC)n	Simple_repeat	1	32	(0)	1896112
39	23.3	4.3	2.7	chr19	51719971	51719983	(6897633)	+	(CTCCCT)n	Simple_repeat	1	148	(0)	1896113
53	25.4	0.8	0.0	chr19	51719984	51720116	(6897500)	+	(TCTC)n	Simple_repeat	1	134	(0)	1896114
12	20.9	3.1	7.6	chr19	52689433	52689496	(5928120)	+	(CTGCT)n	Simple_repeat	1	66	(0)	1897971
16	13.2	0.0	0.0	chr19	52690183	52690207	(5927409)	+	(A)n	Simple_repeat	1	25	(0)	1897972
43	2.5	0.0	0.0	chr19	53521322	53521362	(5096254)	+	(GT)n	Simple_repeat	1	41	(0)	1899508
2059	11.4	0.7	0.0	chr19	53783081	53783386	(4834230)	C	AluSq	SINE/Alu	(4)	309	2	1900227
34	0.0	0.0	0.0	chr19	53980058	53980086	(4637530)	+	(GT)n	Simple_repeat	1	29	(0)	1900731
15	23.2	0.0	0.0	chr19	53980087	53980114	(4637502)	+	(GC)n	Simple_repeat	1	28	(0)	1900732
650	12.5	1.6	0.5	chr19	54095477	54095856	(4521760)	C	MSR1	Satellite	(8)	384	1	1901066
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
136	39.4	0.4	1.8	chr19	54417105	54417840	(4199776)	+	(CA)n	Simple_repeat	1	739	(0)	1901701
21	24.1	6.2	2.0	chr19	55080285	55080380	(3537236)	+	(AGCTGG)n	Simple_repeat	1	102	(0)	1902967
677	6.9	1.9	0.0	chr19	55147210	55147599	(3470017)	C	MSR1	Satellite	(14)	397	1	1903105
22	23.9	3.5	0.0	chr19	55180268	55180324	(3437292)	+	(GT)n	Simple_repeat	1	59	(0)	1903171
215	38.5	1.9	1.9	chr19	55220566	55220671	(3396945)	C	L2b	LINE/L2	(5)	3370	3265	1903265
628	25.3	2.5	0.0	chr19	55342528	55342681	(3274935)	C	MIR3	SINE/MIR	(3)	205	48	1903547
202	35.6	6.5	0.0	chr19	55408694	55408794	(3208822)	+	MIRc	SINE/MIR	57	164	(104)	1903670
655	6.5	1.7	0.0	chr19	55437789	55438177	(3179439)	+	MSR1	Satellite	1	395	(0)	1903737
599	28.6	9.8	0.9	chr19	55441687	55441912	(3175704)	C	MIR	SINE/MIR	(7)	255	19	1903743
474	19.8	0.0	0.0	chr19	55441886	55441971	(3175645)	+	L2c	LINE/L2	3300	3385	(2)	1903742
428	23.3	11.7	0.0	chr19	55461195	55461323	(3156293)	+	MIRc	SINE/MIR	41	186	(82)	1903779
13	20.0	2.0	5.8	chr19	55461724	55461774	(3155842)	+	(CTCTGC)n	Simple_repeat	1	52	(0)	1903780
198	31.6	8.7	0.0	chr19	55504085	55504179	(3113437)	C	MIRb	SINE/MIR	(95)	173	70	1903859
161	34.6	1.7	5.0	chr19	55526812	55527793	(3089823)	+	(CACACT)n	Simple_repeat	1	942	(0)	1903928
29	8.2	6.2	0.0	chr19	55527794	55527858	(3089758)	+	(ACTTGCACAC)n	Simple_repeat	1	69	(0)	1903929
161	34.6	1.7	5.0	chr19	55527859	55528022	(3089594)	+	(CACACT)n	Simple_repeat	1	165	(0)	1903930
12	19.3	0.0	5.1	chr19	55600208	55600246	(3017370)	+	(GCGG)n	Simple_repeat	1	39	(0)	1904120
19	11.3	2.5	2.4	chr19	55600272	55600311	(3017305)	+	(GCC)n	Simple_repeat	1	41	(0)	1904121
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
16	20.7	3.9	1.9	chr19	56404356	56404407	(2213209)	+	(CGGCCC)n	Simple_repeat	1	54	(0)	1905746
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
52	2.1	0.0	0.0	chr19	56595840	56595888	(2021728)	+	(TG)n	Simple_repeat	1	49	(0)	1906050
283	27.1	2.0	1.0	chr19	56637833	56637929	(1979687)	C	MamRep605	LTR?	(650)	199	102	1906137
2205	7.3	1.0	2.7	chr19	57708286	57708586	(909030)	+	AluSq2	SINE/Alu	1	296	(17)	1908193
202	19.1	8.1	6.8	chr19	57708589	57708661	(908955)	+	L2b	LINE/L2	2809	2882	(537)	1908194
233	28.7	2.2	0.0	chr19	57708706	57708792	(908824)	+	L2b	LINE/L2	3000	3088	(287)	1908194
1079	20.2	6.1	9.5	chr19	57830622	57830742	(786874)	C	LTR62	LTR/ERVL	(393)	316	183	1908401
1348	15.3	7.1	0.4	chr19	57888158	57888407	(729209)	+	LTR62	LTR/ERVL	442	709	(0)	1908499
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
14	26.6	3.7	0.0	chr19	58059315	58059368	(558248)	+	(GCCAG)n	Simple_repeat	1	56	(0)	1908790
17	18.7	6.2	6.8	chr19	58305442	58305538	(312078)	+	(AGTGGTG)n	Simple_repeat	1	103	(0)	1909308
2296	19.6	0.7	0.5	chr19	58305671	58306101	(311515)	+	LTR3	LTR/ERVK	1	432	(0)	1909309
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
436	27.0	3.8	2.3	chr19	58498983	58499111	(118505)	+	MIRb	SINE/MIR	67	197	(71)	1909629
15	20.0	0.0	0.0	chr19	58514358	58514386	(103230)	+	(C)n	Simple_repeat	1	29	(0)	1909660
33	34.5	1.6	2.6	chr2	46611	46800	(242146729)	+	(CCGCCC)n	Simple_repeat	1	193	(0)	1910843
17	22.3	3.7	5.9	chr2	676986	677067	(241516462)	+	(GGCCC)n	Simple_repeat	1	85	(0)	1911465
371	34.7	2.4	2.3	chr2	1625953	1626130	(240567399)	C	MIRb	SINE/MIR	(45)	223	35	1912365
42	0.0	0.0	0.0	chr2	2331710	2331745	(239861784)	+	(AC)n	Simple_repeat	1	36	(0)	1913096
13	14.7	0.0	3.1	chr2	2331867	2331898	(239861631)	+	(TTTTC)n	Simple_repeat	1	32	(0)	1913097
250	11.1	2.2	0.0	chr2	2613547	2613591	(239579938)	C	L1M6	LINE/L1	(5901)	595	550	1913479
194	27.3	0.0	0.0	chr2	2613680	2613723	(239579806)	+	LFSINE_Vert	SINE/tRNA	358	401	(58)	1913480
293	28.8	5.3	3.9	chr2	3380245	3380374	(238813155)	+	MIRc	SINE/MIR	99	230	(38)	1914395
16	9.7	0.0	0.0	chr2	3519872	3519893	(238673636)	+	(A)n	Simple_repeat	1	22	(0)	1914570
14	24.3	2.0	2.0	chr2	3575498	3575547	(238617982)	+	G-rich	Low_complexity	1	51	(0)	1914686
660	29.2	9.4	5.9	chr2	7879035	7879456	(234314073)	+	LTR16	LTR/ERVL	1	438	(0)	1920562
1309	24.3	6.0	0.3	chr2	7891272	7891601	(234301928)	+	L1M4	LINE/L1	2	351	(7166)	1920584
359	13.3	13.5	2.2	chr2	7891601	7891692	(234301837)	+	L1M4	LINE/L1	1774	1877	(5640)	1920584
326	32.2	3.2	6.2	chr2	7891750	7891941	(234301588)	C	L1M5	LINE/L1	(1679)	4467	4282	1920583
773	11.0	1.4	1.4	chr2	9465920	9466057	(232727472)	C	L1MB8	LINE/L1	(1)	6177	6040	1922996
777	16.7	0.0	0.0	chr2	9466059	9466178	(232727351)	+	AluJb	SINE/Alu	1	120	(192)	1922997
930	19.8	0.6	0.0	chr2	9466444	9466615	(232726914)	+	AluJb	SINE/Alu	130	302	(10)	1922997
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
663	10.5	0.0	3.2	chr2	10044640	10044734	(232148795)	C	AluSx3	SINE/Alu	(6)	305	214	1924070
238	32.6	2.0	0.1	chr2	10233189	10234101	(231959428)	+	(TGTG)n	Simple_repeat	1	930	(0)	1924437
16	15.5	3.3	0.0	chr2	10303275	10303304	(231890225)	+	(TG)n	Simple_repeat	1	31	(0)	1924546
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
21	21.0	2.8	4.1	chr2	10448241	10448311	(231745218)	+	(CGG)n	Simple_repeat	1	73	(0)	1924773
14	30.3	0.0	1.9	chr2	10911767	10911820	(231281709)	+	(GCG)n	Simple_repeat	1	54	(0)	1925716
53	0.0	0.0	0.0	chr2	11132998	11133042	(231060487)	+	(CA)n	Simple_repeat	1	45	(0)	1926079
17	0.0	0.0	0.0	chr2	11133282	11133300	(231060229)	+	(TC)n	Simple_repeat	1	19	(0)	1926080
17	12.7	0.0	0.0	chr2	11133302	11133327	(231060202)	+	(AC)n	Simple_repeat	1	26	(0)	1926081
14	15.4	5.6	0.0	chr2	11830175	11830210	(230363319)	+	(GTGA)n	Simple_repeat	1	38	(0)	1927316
1515	20.5	8.4	1.8	chr2	15259282	15259764	(226933765)	+	MER67B	LTR/ERV1	1	418	(243)	1932439
469	23.8	3.7	1.6	chr2	15259735	15259965	(226933564)	+	MER67B	LTR/ERV1	273	543	(0)	1932439
297	23.8	12.3	1.2	chr2	15748814	15748931	(226444598)	+	MIR	SINE/MIR	54	182	(80)	1933239
477	28.6	3.5	0.7	chr2	15749278	15749418	(226444111)	C	MIRb	SINE/MIR	(60)	208	64	1933240
146	17.3	0.4	0.0	chr2	15780949	15781209	(226412320)	+	(GT)n	Simple_repeat	1	262	(0)	1933298
19	5.9	2.6	5.0	chr2	15781344	15781382	(226412147)	+	(GGCCAG)n	Simple_repeat	1	40	(0)	1933299
243	31.3	2.9	2.0	chr2	15891042	15891142	(226302387)	C	MIRb	SINE/MIR	(56)	212	111	1933515
14	8.9	0.0	0.0	chr2	15941775	15941798	(226251731)	+	(GGAG)n	Simple_repeat	1	24	(0)	1933618
362	27.8	20.7	0.0	chr2	16105365	16105546	(226087983)	C	MIR	SINE/MIR	(37)	231	1	1933954
1947	12.6	6.6	2.5	chr2	19862963	19863327	(222330202)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1939394
17	9.5	5.9	0.0	chr2	19864057	19864091	(222329438)	+	(TTGT)n	Simple_repeat	1	37	(0)	1939395
5336	12.1	13.0	9.7	chr2	20105982	20107080	(222086449)	C	LTR12D	LTR/ERV1	(113)	1141	1	1939766
2337	9.8	0.0	0.3	chr2	20107173	20107478	(222086051)	+	AluSc8	SINE/Alu	1	305	(6)	1939767
16	22.8	1.6	4.8	chr2	20224799	20224860	(221968669)	+	(CAGCGC)n	Simple_repeat	1	63	(0)	1939965
25	20.3	1.5	2.9	chr2	20350704	20350770	(221842759)	+	(TCC)n	Simple_repeat	1	68	(0)	1940192
208	21.2	4.0	3.1	chr2	20650799	20650882	(221542647)	+	MIRc	SINE/MIR	90	179	(89)	1940694
14	10.3	3.0	2.9	chr2	20651130	20651162	(221542367)	+	(CCCTG)n	Simple_repeat	1	34	(0)	1940695
14	28.4	1.3	5.0	chr2	25216226	25216304	(216977225)	+	(GGCGCCC)n	Simple_repeat	1	80	(0)	1947541
1760	12.3	0.7	8.1	chr2	25216506	25216635	(216976894)	+	AluJb	SINE/Alu	4	126	(186)	1947542
17	18.4	0.0	0.0	chr2	25260691	25260721	(216932808)	+	(CA)n	Simple_repeat	1	31	(0)	1947605
1103	9.8	0.0	3.3	chr2	25260851	25261003	(216932526)	+	AluJr	SINE/Alu	140	287	(25)	1947606
2297	9.9	0.0	3.1	chr2	25261012	25261156	(216932373)	+	AluSx1	SINE/Alu	1	141	(171)	1947607
31	0.0	0.0	7.0	chr2	25673582	25673624	(216519905)	+	(GGCGGAG)n	Simple_repeat	1	43	(0)	1948349
12	28.7	0.0	3.7	chr2	25673638	25673691	(216519838)	+	G-rich	Low_complexity	1	54	(0)	1948350
250	33.6	12.1	1.7	chr2	25673989	25674276	(216519253)	C	L2c	LINE/L2	(38)	3349	3028	1948351
1922	10.6	6.7	1.8	chr2	25921292	25921575	(216271954)	+	AluSq	SINE/Alu	9	307	(6)	1948879
2150	10.6	2.3	0.3	chr2	25921590	25921890	(216271639)	+	AluSg	SINE/Alu	2	308	(2)	1948880
22	8.3	2.6	0.0	chr2	26178876	26178913	(216014616)	+	(GGCGGA)n	Simple_repeat	1	39	(0)	1949490
13	18.4	0.0	0.0	chr2	26179185	26179215	(216014314)	+	(CCCCCG)n	Simple_repeat	1	31	(0)	1949491
627	23.1	2.3	0.0	chr2	26179317	26179446	(216014083)	C	MIRb	SINE/MIR	(113)	155	23	1949492
12	18.9	7.1	0.0	chr2	26184741	26184782	(216008747)	+	(CGCTGG)n	Simple_repeat	1	45	(0)	1949502
7990	11.7	4.9	1.4	chr2	26298404	26299683	(215893846)	+	HERV15-int	LTR/ERV1	1	1268	(7467)	1949706
15	26.8	3.0	2.9	chr2	26847631	26847696	(215345833)	+	(GGC)n	Simple_repeat	1	68	(0)	1950751
18	11.6	0.0	4.9	chr2	27032889	27032929	(215160600)	+	G-rich	Low_complexity	1	41	(0)	1951084
16	19.6	0.0	4.4	chr2	27033067	27033111	(215160418)	+	(CGG)n	Simple_repeat	1	45	(0)	1951085
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
33	0.0	0.0	0.0	chr2	27086722	27086752	(215106777)	+	(CGGGG)n	Simple_repeat	1	31	(0)	1951151
474	30.2	8.5	1.6	chr2	27118131	27118372	(215075157)	C	L3	LINE/CR1	(6)	4093	3834	1951208
1946	5.8	6.4	4.7	chr2	27134874	27135151	(215058378)	+	AluSp	SINE/Alu	14	296	(17)	1951231
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
14	31.9	0.0	0.0	chr2	27442515	27442568	(214750961)	+	(CCCGC)n	Simple_repeat	1	54	(0)	1951833
14	27.9	2.7	4.0	chr2	28810646	28810719	(213382810)	+	(GCGG)n	Simple_repeat	1	76	(0)	1954258
332	32.0	6.2	5.1	chr2	28811152	28811309	(213382220)	+	L1M4b	LINE/L1	458	617	(6250)	1954259
329	22.8	10.7	1.1	chr2	30937862	30937954	(211255575)	C	MIRb	SINE/MIR	(115)	153	51	1957722
16	21.4	4.7	0.0	chr2	30938004	30938069	(211255460)	+	(AC)n	Simple_repeat	1	69	(0)	1957724
31	5.5	0.0	2.5	chr2	30938290	30938329	(211255200)	+	(AC)n	Simple_repeat	1	40	(0)	1957725
30	0.0	0.0	0.0	chr2	30938360	30938385	(211255144)	+	(AC)n	Simple_repeat	1	26	(0)	1957725
21	0.0	0.0	0.0	chr2	30938386	30938408	(211255121)	+	(TC)n	Simple_repeat	1	23	(0)	1957726
15	11.2	0.0	3.2	chr2	31138684	31138714	(211054815)	+	(GGGGC)n	Simple_repeat	1	31	(0)	1958027
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
21	14.9	0.0	4.2	chr2	32947823	32947870	(209245659)	+	(GCCC)n	Simple_repeat	1	48	(0)	1961246
531	33.6	8.8	5.0	chr2	36597200	36597537	(205595992)	+	L2c	LINE/L2	3036	3387	(0)	1966233
22	14.3	2.1	2.0	chr2	36966336	36966383	(205227146)	+	(GCC)n	Simple_repeat	1	49	(0)	1966852
21	23.0	4.1	1.3	chr2	37671684	37671756	(204521773)	+	(GCGGC)n	Simple_repeat	1	76	(0)	1968080
300	34.6	5.4	2.5	chr2	39124616	39124778	(203068751)	+	L2	LINE/L2	2787	2954	(465)	1970603
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
13	5.2	0.0	0.0	chr2	41837023	41837042	(200356487)	+	(TGG)n	Simple_repeat	1	20	(0)	1974493
487	30.4	1.9	1.2	chr2	41837187	41837346	(200356183)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1974494
41	8.2	0.0	0.0	chr2	41937460	41937512	(200256017)	+	(AC)n	Simple_repeat	1	53	(0)	1974671
26	10.6	7.9	1.5	chr2	42492753	42492815	(199700714)	+	(GGACG)n	Simple_repeat	1	68	(0)	1975680
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
13	23.0	0.0	2.6	chr2	43225378	43225415	(198968114)	+	(CTG)n	Simple_repeat	1	38	(0)	1977141
232	27.5	9.0	1.5	chr2	44016224	44016356	(198177173)	+	MamRep564	Unknown	88	231	(126)	1978409
13	23.3	4.4	0.0	chr2	44949967	44950011	(197243518)	+	GA-rich	Low_complexity	1	47	(0)	1979991
56	0.0	0.0	0.0	chr2	44950154	44950201	(197243328)	+	(AC)n	Simple_repeat	1	48	(0)	1979992
33	5.6	0.0	0.0	chr2	45651060	45651096	(196542433)	+	(CA)n	Simple_repeat	1	37	(0)	1981029
22	16.0	8.8	2.3	chr2	45651173	45651252	(196542277)	+	(GGCGAGC)n	Simple_repeat	1	87	(0)	1981030
22	3.5	0.0	0.0	chr2	46941357	46941385	(195252144)	+	(GCT)n	Simple_repeat	1	29	(0)	1983105
192	22.0	10.6	4.8	chr2	46941842	46941903	(195251626)	+	Tigger19a	DNA/TcMar-Tigger	153	218	(105)	1983106
14	7.8	3.7	0.0	chr2	47369093	47369119	(194824410)	+	(GGGGC)n	Simple_repeat	1	28	(0)	1983925
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
3336	21.3	8.2	3.0	chr2	48047084	48047211	(194146318)	+	ERVL-E-int	LTR/ERVL	5540	5667	(0)	1985287
2363	20.0	14.9	0.9	chr2	48047216	48047467	(194146062)	+	MLT2F	LTR/ERVL	5	316	(347)	1985287
54	3.7	0.0	0.0	chr2	48047468	48047522	(194146007)	+	(GT)n	Simple_repeat	1	55	(0)	1985290
2363	20.0	14.9	0.9	chr2	48047523	48047835	(194145694)	+	MLT2F	LTR/ERVL	317	663	(0)	1985287
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
356	38.6	5.2	5.7	chr2	50225345	50225712	(191967817)	C	L2c	LINE/L2	(18)	3369	3004	1988481
38	16.8	4.6	0.0	chr2	51032140	51032226	(191161303)	+	GA-rich	Low_complexity	1	91	(0)	1989561
50	0.0	0.0	0.0	chr2	51032511	51032553	(191160976)	+	(AG)n	Simple_repeat	1	43	(0)	1989562
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
16	16.8	7.3	1.7	chr2	61177366	61177378	(181016151)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	2003842
19	11.6	0.0	4.9	chr2	61177379	61177419	(181016110)	+	G-rich	Low_complexity	1	41	(0)	2003843
492	24.5	9.1	17.0	chr2	61597636	61597935	(180595594)	+	MamGypLTR1a	LTR/Gypsy	1	274	(510)	2004693
11	14.1	0.0	8.1	chr2	63050325	63050361	(179143168)	+	G-rich	Low_complexity	1	37	(0)	2007375
26	22.8	0.0	0.0	chr2	63050635	63050690	(179142839)	+	G-rich	Low_complexity	1	56	(0)	2007376
328	33.6	8.8	9.1	chr2	63059510	63059784	(179133745)	C	L1M4b	LINE/L1	(6375)	492	219	2007382
29	3.2	0.0	0.0	chr2	63059974	63060005	(179133524)	+	(CCACCC)n	Simple_repeat	1	32	(0)	2007383
19	16.6	4.3	0.0	chr2	64524370	64524416	(177669113)	+	(GCGGAG)n	Simple_repeat	1	49	(0)	2009513
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
245	31.1	4.5	2.8	chr2	65275764	65275872	(176917657)	+	Tigger16b	DNA/TcMar-Tigger	213	323	(13)	2010955
319	22.1	1.4	0.0	chr2	65437992	65438059	(176755470)	+	MamGypLTR3a	LTR/Gypsy	125	193	(788)	2011242
535	30.6	2.7	4.4	chr2	65438073	65438301	(176755228)	+	MER102b	DNA/hAT-Charlie	7	231	(110)	2011243
234	11.4	0.0	0.0	chr2	65438316	65438350	(176755179)	+	MER102c	DNA/hAT-Charlie	297	331	(0)	2011244
319	26.8	9.7	2.6	chr2	65438351	65438464	(176755065)	+	MamGypLTR3a	LTR/Gypsy	193	315	(666)	2011242
24	10.0	2.2	2.1	chr2	66424811	66424856	(175768673)	+	(GTTTT)n	Simple_repeat	1	47	(0)	2012766
38	5.0	0.0	0.0	chr2	66425218	66425259	(175768270)	+	(GT)n	Simple_repeat	1	42	(0)	2012767
18	6.8	3.2	0.0	chr2	66434175	66434205	(175759324)	+	(CCGCG)n	Simple_repeat	1	32	(0)	2012777
15	21.1	2.5	2.4	chr2	66434929	66434968	(175758561)	+	(TG)n	Simple_repeat	1	41	(0)	2012778
30	9.6	2.2	0.0	chr2	66435286	66435331	(175758198)	+	(AG)n	Simple_repeat	1	47	(0)	2012779
33	0.0	3.1	0.0	chr2	66581220	66581251	(175612278)	+	(CT)n	Simple_repeat	1	33	(0)	2012932
22	0.0	0.0	0.0	chr2	66581252	66581275	(175612254)	+	(AC)n	Simple_repeat	1	24	(0)	2012933
12	13.3	5.7	2.7	chr2	66581344	66581378	(175612151)	+	(TTG)n	Simple_repeat	1	37	(0)	2012934
299	27.7	8.0	0.0	chr2	67341008	67341156	(174852373)	C	MIR3	SINE/MIR	(6)	256	60	2013943
11	20.5	2.9	0.0	chr2	68252737	68252770	(173940759)	+	G-rich	Low_complexity	1	35	(0)	2015306
13	26.3	1.7	3.4	chr2	69387003	69387060	(172806469)	+	(CGGCCCC)n	Simple_repeat	1	59	(0)	2016983
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
12	28.2	1.9	1.9	chr2	70142416	70142468	(172051061)	+	(CCGC)n	Simple_repeat	1	54	(0)	2018486
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
72	36.4	1.5	0.6	chr2	70664687	70665022	(171528507)	+	(GT)n	Simple_repeat	1	341	(0)	2019432
16	25.6	0.0	3.4	chr2	70790575	70790633	(171402896)	+	G-rich	Low_complexity	1	59	(0)	2019614
17	7.0	3.3	0.0	chr2	70790700	70790729	(171402800)	+	(GGGCGG)n	Simple_repeat	1	31	(0)	2019615
147	31.3	1.0	0.6	chr2	71577198	71577695	(170615834)	+	(AC)n	Simple_repeat	1	503	(0)	2020858
29	31.7	1.1	0.0	chr2	72895761	72895854	(169297675)	+	(CA)n	Simple_repeat	1	95	(0)	2022767
18	12.2	0.0	0.0	chr2	72895997	72896023	(169297506)	+	(GT)n	Simple_repeat	1	27	(0)	2022768
225	24.2	7.8	3.1	chr2	72896191	72896288	(169297241)	+	MIRc	SINE/MIR	49	151	(117)	2022769
30	19.8	1.9	6.5	chr2	73284383	73284487	(168909042)	+	GA-rich	Low_complexity	1	107	(0)	2023446
15	23.1	0.0	4.0	chr2	73284634	73284683	(168908846)	+	(GGCTCCC)n	Simple_repeat	1	50	(0)	2023447
729	14.6	3.8	1.3	chr2	73981617	73981769	(168211760)	C	MER5A	DNA/hAT-Charlie	(32)	157	1	2024571
13	8.3	0.0	6.7	chr2	74648174	74648203	(167545326)	+	(GCCCA)n	Simple_repeat	1	30	(0)	2025726
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
2295	12.5	0.0	0.0	chr2	79782225	79782536	(162410993)	C	AluSq2	SINE/Alu	(1)	312	1	2032763
408	26.2	2.8	0.0	chr2	79782696	79782798	(162410731)	C	AmnSINE1	SINE/5S-Deu-L2	(67)	508	403	2032764
593	33.3	4.4	0.5	chr2	80008626	80008842	(162184687)	+	MIRb	SINE/MIR	30	255	(13)	2033097
201	24.7	4.3	11.9	chr2	84925970	84926070	(157267459)	C	MER91C	DNA/hAT-Tip100	(31)	109	17	2039689
187	14.3	0.0	0.0	chr2	84959730	84959757	(157233772)	+	MIR3	SINE/MIR	33	60	(148)	2039777
202	28.4	9.9	7.2	chr2	84959768	84959934	(157233595)	C	L2c	LINE/L2	(2)	3385	3214	2039778
255	31.7	1.0	2.9	chr2	84959944	84960047	(157233482)	C	MER5B	DNA/hAT-Charlie	(2)	176	75	2039779
1086	14.3	1.8	3.0	chr2	84960189	84960356	(157233173)	C	AluJb	SINE/Alu	(10)	302	137	2039780
2211	11.2	0.3	0.3	chr2	85090085	85090388	(157103141)	+	AluSc	SINE/Alu	1	304	(5)	2040082
32	21.5	2.7	0.0	chr2	85418577	85418651	(156774878)	+	(CA)n	Simple_repeat	1	77	(0)	2040720
12	7.4	10.3	0.0	chr2	85611846	85611874	(156581655)	+	(GGC)n	Simple_repeat	1	32	(0)	2041125
16	14.2	0.0	0.0	chr2	85612145	85612175	(156581354)	+	(TCGGG)n	Simple_repeat	1	31	(0)	2041126
18	11.6	0.0	4.9	chr2	85616281	85616321	(156577208)	+	G-rich	Low_complexity	1	41	(0)	2041141
2438	6.8	0.0	4.0	chr2	85616668	85616989	(156576540)	C	AluSc8	SINE/Alu	(2)	309	1	2041142
15	23.7	0.0	7.3	chr2	86807811	86807878	(155385651)	+	G-rich	Low_complexity	1	68	(0)	2043240
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
26	0.0	0.0	0.0	chr2	88627212	88627236	(153566293)	+	(CAG)n	Simple_repeat	1	25	(0)	2046398
283	25.7	2.9	1.9	chr2	95121486	95121588	(147071941)	C	MIR3	SINE/MIR	(24)	184	81	2050217
19	30.7	1.1	2.3	chr2	96116565	96116651	(146076878)	+	G-rich	Low_complexity	1	88	(0)	2051589
12	16.0	2.0	8.0	chr2	96116834	96116882	(146076647)	+	G-rich	Low_complexity	1	50	(0)	2051590
12	24.4	4.4	4.2	chr2	96321923	96321990	(145871539)	+	(GGAGGC)n	Simple_repeat	1	71	(0)	2051942
150	41.3	0.8	0.1	chr2	96772140	96772980	(145420549)	+	(CA)n	Simple_repeat	1	848	(0)	2052749
318	31.5	6.6	9.2	chr2	100896092	100896308	(141297221)	C	MIRb	SINE/MIR	(23)	245	35	2058689
282	34.0	6.8	1.6	chr2	100896330	100896523	(141297006)	+	MIRc	SINE/MIR	5	209	(59)	2058690
12	19.1	2.6	2.6	chr2	101308488	101308525	(140885004)	+	(GCCCGG)n	Simple_repeat	1	39	(0)	2059376
233	28.9	4.6	0.0	chr2	104757991	104758073	(137435456)	+	MIR3	SINE/MIR	111	197	(11)	2063931
36	2.7	0.0	0.0	chr2	104758096	104758133	(137435396)	+	(CCCCA)n	Simple_repeat	1	38	(0)	2063932
12	24.0	2.2	2.1	chr2	104842667	104842712	(137350817)	+	(GCACGC)n	Simple_repeat	1	47	(0)	2064052
12	12.8	5.6	2.6	chr2	104842880	104842915	(137350614)	+	(GCGCGCG)n	Simple_repeat	1	38	(0)	2064053
43	0.0	0.0	0.0	chr2	104852965	104853001	(137340528)	+	(CA)n	Simple_repeat	1	37	(0)	2064062
30	14.0	2.6	5.0	chr2	104853225	104853302	(137340227)	+	GA-rich	Low_complexity	1	80	(0)	2064063
33	31.6	1.5	0.8	chr2	104854134	104854263	(137339266)	+	GA-rich	Low_complexity	1	132	(0)	2064065
13	19.2	2.2	4.3	chr2	104854390	104854434	(137339095)	+	(CACCTC)n	Simple_repeat	1	46	(0)	2064066
16	12.1	5.6	0.0	chr2	104862564	104862599	(137330930)	+	(GCGGTG)n	Simple_repeat	1	38	(0)	2064080
32	3.2	0.0	0.0	chr2	104872060	104872091	(137321438)	+	(AC)n	Simple_repeat	1	32	(0)	2064083
13	20.1	0.0	2.8	chr2	104873433	104873468	(137320061)	+	(GCCCG)n	Simple_repeat	1	36	(0)	2064084
16	6.9	6.5	0.0	chr2	104873528	104873558	(137319971)	+	(CACTCA)n	Simple_repeat	1	33	(0)	2064085
892	29.6	10.0	7.5	chr2	104969593	104970070	(137223459)	+	LTR33	LTR/ERVL	25	515	(0)	2064194
10201	25.0	4.6	0.4	chr2	108402306	108404791	(133788738)	+	HERVIP10F-int	LTR/ERV1	5094	7717	(20)	2069189
265	29.2	6.6	5.8	chr2	108448919	108449038	(133744491)	C	MIRc	SINE/MIR	(123)	145	25	2069252
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
1856	11.4	3.7	4.0	chr2	111884655	111884951	(130308578)	+	AluJo	SINE/Alu	9	304	(8)	2074183
391	25.0	2.3	0.0	chr2	112160562	112160645	(130032884)	C	L1MC1	LINE/L1	(16)	6317	6232	2074640
121	13.4	2.7	0.9	chr2	112160646	112160867	(130032662)	+	(GCACAC)n	Simple_repeat	1	228	(0)	2074641
180	28.5	8.9	3.1	chr2	112181575	112181701	(130011828)	+	L2b	LINE/L2	3213	3347	(28)	2074679
14	8.4	0.0	3.7	chr2	113756357	113756383	(128437146)	+	(CCTG)n	Simple_repeat	1	27	(0)	2077266
11	16.4	5.9	0.0	chr2	113756428	113756461	(128437068)	+	(CCGCGG)n	Simple_repeat	1	36	(0)	2077267
16	19.5	3.6	3.5	chr2	113756650	113756705	(128436824)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	2077268
13	21.9	1.8	7.0	chr2	113756846	113756901	(128436628)	+	GA-rich	Low_complexity	1	57	(0)	2077269
595	30.9	4.1	5.2	chr2	113757044	113757292	(128436237)	+	MIR	SINE/MIR	9	254	(8)	2077270
23	8.1	2.6	0.0	chr2	119224346	119224384	(122969145)	+	(GGGCAG)n	Simple_repeat	1	40	(0)	2084940
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
341	24.9	18.0	0.6	chr2	120443232	120443405	(121750124)	+	MIR	SINE/MIR	38	248	(14)	2086976
380	29.9	10.8	7.4	chr2	120443449	120443679	(121749850)	C	MamRep38	DNA/hAT	(52)	243	4	2086977
168	24.9	0.5	0.9	chr2	120480722	120481140	(121712389)	+	(GT)n	Simple_repeat	1	421	(0)	2087040
188	23.2	8.2	0.0	chr2	120481225	120481280	(121712249)	+	L2a	LINE/L2	3353	3413	(13)	2087033
53	9.1	0.0	0.0	chr2	120680500	120680571	(121512958)	+	(GT)n	Simple_repeat	1	72	(0)	2087395
532	24.5	2.7	2.0	chr2	120680608	120680753	(121512776)	+	MIRb	SINE/MIR	15	161	(107)	2087396
1668	20.0	1.0	0.0	chr2	120680767	120681061	(121512468)	+	AluJo	SINE/Alu	2	299	(13)	2087397
1937	15.6	3.2	0.0	chr2	120824824	120825125	(121368404)	C	AluJb	SINE/Alu	(0)	312	1	2087617
2306	9.3	0.7	0.3	chr2	122484167	122484450	(119709079)	C	AluSx	SINE/Alu	(26)	286	1	2090475
16	0.0	0.0	0.0	chr2	122484471	122484488	(119709041)	+	(AC)n	Simple_repeat	1	18	(0)	2090476
17	0.0	0.0	0.0	chr2	122484488	122484506	(119709023)	+	(CT)n	Simple_repeat	1	19	(0)	2090477
230	28.1	9.4	5.9	chr2	122484514	122484615	(119708914)	C	LTR104_Mam	LTR/Gypsy	(1316)	193	88	2090478
14	11.2	3.5	0.0	chr2	122516745	122516773	(119676756)	+	(TAAAA)n	Simple_repeat	1	30	(0)	2090522
197	23.6	0.0	0.5	chr2	122859217	122859654	(119333875)	+	(TG)n	Simple_repeat	1	438	(0)	2091011
380	32.1	9.5	5.1	chr2	126942936	126943306	(115250223)	C	L3	LINE/CR1	(55)	4044	3656	2096639
313	22.6	2.2	5.2	chr2	127043707	127044768	(115148761)	+	(CACTCA)n	Simple_repeat	1	1085	(0)	2096803
31	21.5	0.0	0.0	chr2	127387386	127387447	(114806082)	+	(AC)n	Simple_repeat	1	62	(0)	2097356
14	22.8	0.0	0.0	chr2	127526413	127526448	(114667081)	+	(GGCG)n	Simple_repeat	1	36	(0)	2097594
14	12.2	5.3	2.5	chr2	128091278	128091315	(114102214)	+	(CCTGC)n	Simple_repeat	1	40	(0)	2098653
1745	26.3	5.0	2.2	chr2	128260202	128260624	(113932905)	C	MLT1J	LTR/ERVL-MaLR	(69)	443	2	2098979
288	24.0	4.6	7.4	chr2	128261020	128261154	(113932375)	+	LTR81AB	LTR/Gypsy	132	262	(16)	2098981
17	10.0	3.1	0.0	chr2	128322219	128322270	(113871259)	+	(GGCCCC)n	Simple_repeat	1	53	(0)	2099035
26	0.0	0.0	0.0	chr2	130372356	130372380	(111821149)	+	(GACGGG)n	Simple_repeat	1	25	(0)	2101734
280	36.8	3.6	4.6	chr2	130836310	130836503	(111357026)	+	MIR3	SINE/MIR	1	192	(16)	2102407
20	20.1	2.5	9.9	chr2	130836822	130836939	(111356590)	+	G-rich	Low_complexity	1	121	(0)	2102408
11	21.6	0.0	4.9	chr2	132489403	132489443	(109704086)	+	G-rich	Low_complexity	1	41	(0)	2104663
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
18	18.4	2.7	0.0	chr2	138213754	138213790	(103979739)	+	(AC)n	Simple_repeat	1	38	(0)	2113113
201	39.4	5.4	3.2	chr2	138213930	138214055	(103979474)	C	L2b	LINE/L2	(0)	3375	3247	2113114
17	0.0	3.2	6.2	chr2	138501746	138501781	(103691748)	+	(GCC)n	Simple_repeat	1	34	(0)	2113519
15	21.8	4.8	3.1	chr2	138501781	138501842	(103691687)	+	(CGGAGC)n	Simple_repeat	1	65	(0)	2113520
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
13	23.8	2.2	2.1	chr2	138780391	138780436	(103413093)	+	G-rich	Low_complexity	1	47	(0)	2113952
4274	9.4	0.8	9.4	chr2	142979814	142980507	(99213022)	C	MER41B	LTR/ERV1	(0)	634	1	2119508
13	18.6	0.0	9.4	chr2	142980721	142980773	(99212756)	+	(TATGAG)n	Simple_repeat	1	53	(0)	2119509
20	0.0	0.0	0.0	chr2	144445266	144445287	(97748242)	+	(T)n	Simple_repeat	1	22	(0)	2121425
22	23.6	1.7	0.0	chr2	144445414	144445473	(97748056)	+	(TCTCTC)n	Simple_repeat	1	61	(0)	2121426
44	2.4	0.0	0.0	chr2	144510688	144510729	(97682800)	+	(CT)n	Simple_repeat	1	42	(0)	2121488
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
34	5.3	0.0	0.0	chr2	147844401	147844440	(94349089)	+	(GCC)n	Simple_repeat	1	40	(0)	2125791
295	24.4	2.2	0.0	chr2	150735910	150735999	(91457530)	+	L1ME1	LINE/L1	17	108	(6315)	2129810
2822	2.5	0.0	3.2	chr2	151288962	151289276	(90904253)	+	AluY	SINE/Alu	1	305	(6)	2130625
26	17.8	0.0	3.3	chr2	152098885	152098945	(90094584)	+	GA-rich	Low_complexity	1	61	(0)	2131855
27546	2.8	0.0	0.0	chr2	153397922	153403952	(88789577)	C	L1PA2	LINE/L1	(0)	6155	127	2133691
19	24.4	3.4	4.3	chr2	161160246	161160334	(81033195)	+	(GGCAG)n	Simple_repeat	1	92	(0)	2144048
16	0.0	4.3	0.0	chr2	161418726	161418748	(80774781)	+	(CCAG)n	Simple_repeat	1	24	(0)	2144405
15	0.0	0.0	7.4	chr2	163736336	163736362	(78457167)	+	(GGCC)n	Simple_repeat	1	27	(0)	2147386
15	17.9	0.0	4.8	chr2	165794145	165794186	(76399343)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	2150134
16	0.0	0.0	0.0	chr2	165796990	165797007	(76396522)	+	(TC)n	Simple_repeat	1	18	(0)	2150138
40	0.0	0.0	0.0	chr2	165797029	165797062	(76396467)	+	(AC)n	Simple_repeat	1	34	(0)	2150139
350	20.6	0.0	0.0	chr2	165797140	165797202	(76396327)	+	L2a	LINE/L2	3364	3426	(0)	2150140
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
10351	19.8	7.3	3.5	chr2	167330609	167332272	(74861257)	C	L1MA4A	LINE/L1	(4898)	1951	190	2152065
1833	19.8	4.8	1.0	chr2	167332401	167332803	(74860726)	C	MER68C	LTR/ERVL	(0)	419	1	2152071
57	1.8	0.0	1.7	chr2	168552350	168552407	(73641122)	+	(AC)n	Simple_repeat	1	58	(0)	2153733
2280	26.0	12.0	2.5	chr2	168552746	168553962	(73639567)	+	L1M7	LINE/L1	606	2280	(185)	2153734
69	0.0	0.0	0.0	chr2	169364608	169364666	(72828863)	+	(GT)n	Simple_repeat	1	59	(0)	2154847
12	22.8	5.7	1.8	chr2	169364878	169364930	(72828599)	+	GA-rich	Low_complexity	1	56	(0)	2154848
29	0.0	0.0	0.0	chr2	169733603	169733627	(72459902)	+	(CA)n	Simple_repeat	1	25	(0)	2155495
695	9.2	16.4	6.9	chr2	169789666	169789796	(72403733)	C	AluJr	SINE/Alu	(166)	146	1	2155604
620	16.1	11.8	0.0	chr2	169789813	169789961	(72403568)	+	L1ME3	LINE/L1	5320	5488	(674)	2155603
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
27	20.3	1.1	6.5	chr2	169827686	169827776	(72365753)	+	(GCG)n	Simple_repeat	1	92	(0)	2155682
21	19.6	2.5	6.2	chr2	171160204	171160282	(71033247)	+	G-rich	Low_complexity	1	81	(0)	2157910
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
16	19.5	1.9	7.3	chr2	172000139	172000192	(70193337)	+	(AC)n	Simple_repeat	1	55	(0)	2159420
19	28.0	1.2	4.8	chr2	172102783	172102876	(70090653)	+	G-rich	Low_complexity	1	90	(0)	2159595
343	27.8	8.6	10.4	chr2	173076036	173076236	(69117293)	C	L1M4b	LINE/L1	(6211)	656	460	2161104
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
14	15.0	5.4	0.0	chr2	174248642	174248678	(67944851)	+	(GCCCC)n	Simple_repeat	1	39	(0)	2162948
688	27.6	7.4	4.7	chr2	174249217	174249452	(67944077)	+	MIRb	SINE/MIR	18	260	(8)	2162949
18	31.8	0.0	0.0	chr2	174336898	174336959	(67856570)	+	(CGC)n	Simple_repeat	1	62	(0)	2163103
196	28.6	6.7	3.9	chr2	174771891	174771992	(67421537)	+	L2	LINE/L2	65	169	(3250)	2163820
49	2.0	2.0	0.0	chr2	174990214	174990263	(67203266)	+	(GT)n	Simple_repeat	1	51	(0)	2164130
25	35.6	1.0	0.0	chr2	174990264	174990366	(67203163)	+	GA-rich	Low_complexity	1	104	(0)	2164131
23	15.6	3.2	4.6	chr2	175005224	175005286	(67188243)	+	(GGC)n	Simple_repeat	1	65	(0)	2164159
20	15.1	2.2	2.1	chr2	176080615	176080660	(66112869)	+	(GCC)n	Simple_repeat	1	47	(0)	2165642
13	9.3	0.0	0.0	chr2	176171491	176171513	(66022016)	+	(CCCT)n	Simple_repeat	1	23	(0)	2165727
234	21.9	14.0	0.0	chr2	176269793	176269871	(65923658)	C	MIR1_Amn	SINE/MIR	(98)	170	83	2165875
676	24.3	2.2	3.8	chr2	176449766	176449949	(65743580)	C	Helitron3Na_Mam	RC/Helitron	(305)	181	1	2166151
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
14	25.2	5.0	3.6	chr2	177392828	177392907	(64800622)	+	G-rich	Low_complexity	1	84	(0)	2167595
378	28.1	15.1	5.3	chr2	177905790	177906127	(64287402)	+	LTR88b	LTR/Gypsy?	39	415	(422)	2168268
16	13.2	0.0	0.0	chr2	177906142	177906166	(64287363)	+	(CT)n	Simple_repeat	1	25	(0)	2168269
28	0.0	0.0	0.0	chr2	177906178	177906204	(64287325)	+	(CACG)n	Simple_repeat	1	27	(0)	2168270
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
16	26.1	3.4	0.0	chr2	186590241	186590299	(55603230)	+	G-rich	Low_complexity	1	61	(0)	2179278
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
265	28.9	14.8	6.9	chr2	189674909	189675036	(52518493)	+	MIRb	SINE/MIR	33	178	(90)	2183194
780	21.9	3.3	0.0	chr2	189675037	189675214	(52518315)	+	MER5A	DNA/hAT-Charlie	5	188	(1)	2183195
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
395	21.9	10.4	4.2	chr2	191019976	191020190	(51173339)	+	L1ME4a	LINE/L1	5819	6048	(76)	2185240
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
17	21.0	0.0	4.2	chr2	192194611	192194658	(49998871)	+	(GCG)n	Simple_repeat	1	48	(0)	2186921
12396	6.0	0.2	1.3	chr2	193903875	193905536	(48287993)	+	L1P1	LINE/L1	1	1644	(4511)	2189013
2119	23.6	11.0	5.3	chr2	196097023	196097811	(46095718)	+	MER21C	LTR/ERVL	15	853	(85)	2191885
857	7.7	0.8	13.6	chr2	197435318	197435472	(44758057)	+	FRAM	SINE/Alu	22	156	(20)	2194005
242	25.0	0.0	0.0	chr2	197452973	197453024	(44740505)	C	MIRc	SINE/MIR	(64)	204	153	2194055
20	18.7	1.4	7.0	chr2	197705224	197705240	(44488289)	+	(GGCG)n	Simple_repeat	1	66	(0)	2194510
21	14.3	2.1	2.0	chr2	197705241	197705288	(44488241)	+	(GGCGG)n	Simple_repeat	1	49	(0)	2194511
5235	11.8	0.8	0.5	chr2	200202685	200203459	(41990070)	+	L1PBa	LINE/L1	3009	3785	(3077)	2197969
2175	14.0	9.7	4.0	chr2	200203460	200204035	(41989494)	+	MER51B	LTR/ERV1	1	634	(0)	2197972
14	18.0	8.0	0.0	chr2	200526339	200526388	(41667141)	+	(TCCGGCC)n	Simple_repeat	1	54	(0)	2198471
850	9.2	1.6	0.0	chr2	200864998	200865128	(41328401)	+	FLAM_C	SINE/Alu	6	131	(2)	2199013
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
29	7.2	2.3	0.0	chr2	204545612	204545655	(37647874)	+	(GCCAGG)n	Simple_repeat	1	45	(0)	2205786
326	23.5	13.1	4.0	chr2	204545685	204545808	(37647721)	C	L1MDb	LINE/L1	(5718)	691	555	2205787
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
21	19.8	0.0	0.0	chr2	205682634	205682679	(36510850)	+	(CAG)n	Simple_repeat	1	46	(0)	2207283
16	8.7	0.0	0.0	chr2	205682922	205682946	(36510583)	+	(ATT)n	Simple_repeat	1	25	(0)	2207284
12	19.3	4.7	2.2	chr2	205686012	205686054	(36507475)	+	(CCCCT)n	Simple_repeat	1	45	(0)	2207286
211	30.1	12.1	2.4	chr2	207811138	207811345	(34382184)	C	MIR3	SINE/MIR	(35)	233	3	2210752
3395	4.2	0.5	6.7	chr2	209299313	209299790	(32893739)	+	LTR7	LTR/ERV1	1	448	(2)	2212844
2697	19.7	2.4	5.3	chr2	209615632	209616285	(32577244)	+	LTR27	LTR/ERV1	3	636	(0)	2213276
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
49	0.0	0.0	2.2	chr2	216692358	216692403	(25501126)	+	(GT)n	Simple_repeat	1	46	(0)	2223256
233	24.6	1.7	0.0	chr2	217756467	217756533	(24436996)	C	MIR3	SINE/MIR	(61)	147	83	2224907
290	24.5	1.0	0.1	chr2	218030846	218031543	(24161986)	+	(TG)n	Simple_repeat	1	705	(0)	2225365
439	24.6	1.7	0.9	chr2	218031544	218031658	(24161871)	+	Charlie24	DNA/hAT-Charlie	2334	2449	(1)	2225366
13	14.5	7.9	0.0	chr2	218217709	218217746	(23975783)	+	G-rich	Low_complexity	1	41	(0)	2225669
13	21.7	0.0	2.6	chr2	218367999	218368037	(23825492)	+	G-rich	Low_complexity	1	39	(0)	2225962
341	25.8	7.3	2.6	chr2	218368170	218368321	(23825208)	C	MIR	SINE/MIR	(36)	194	22	2225963
208	30.2	0.0	0.0	chr2	218569386	218569438	(23624091)	C	MIR3	SINE/MIR	(49)	159	107	2226394
674	22.8	18.9	12.6	chr2	218909457	218909862	(23283667)	+	Arthur1B	DNA/hAT-Tip100	14	451	(774)	2227017
13	16.2	4.4	4.3	chr2	219160852	219160896	(23032633)	+	G-rich	Low_complexity	1	47	(0)	2227435
12	22.1	0.0	0.0	chr2	219176901	219176932	(23016597)	+	(TGCC)n	Simple_repeat	1	32	(0)	2227457
14	16.4	2.9	0.0	chr2	219176946	219176979	(23016550)	+	(CGCCCT)n	Simple_repeat	1	35	(0)	2227458
477	28.1	0.7	0.7	chr2	219244937	219245072	(22948457)	C	MIR	SINE/MIR	(114)	148	13	2227579
17	14.9	0.0	2.6	chr2	219308534	219308572	(22884957)	+	(CCCCACC)n	Simple_repeat	1	39	(0)	2227680
312	31.1	12.1	4.1	chr2	219433956	219434290	(22759239)	+	L2c	LINE/L2	2767	3132	(255)	2227947
328	23.8	11.9	1.6	chr2	219434275	219434402	(22759127)	C	MIRb	SINE/MIR	(117)	151	9	2227948
13	29.0	0.0	0.0	chr2	219544109	219544154	(22649375)	+	(GCCCCT)n	Simple_repeat	1	46	(0)	2228104
11	27.6	2.0	2.0	chr2	219571756	219571805	(22621724)	+	(CCTGCC)n	Simple_repeat	1	51	(0)	2228144
56	12.4	0.0	0.0	chr2	219571954	219572050	(22621479)	+	(TG)n	Simple_repeat	1	97	(0)	2228145
12	6.8	9.1	2.8	chr2	222671590	222671622	(19521907)	+	(CCCAG)n	Simple_repeat	1	36	(0)	2232961
12	15.5	3.5	0.0	chr2	222860880	222860908	(19332621)	+	(CGCGC)n	Simple_repeat	1	30	(0)	2233362
577	31.4	4.1	0.9	chr2	223618050	223618264	(18575265)	C	MIR	SINE/MIR	(6)	256	35	2234498
289	32.9	7.9	0.8	chr2	223618651	223618796	(18574733)	C	MIRc	SINE/MIR	(42)	166	14	2234499
273	28.1	8.6	7.1	chr2	224433640	224433823	(17759706)	+	L2c	LINE/L2	2977	3163	(224)	2235924
13	16.8	0.0	5.4	chr2	229714887	229714923	(12478606)	+	G-rich	Low_complexity	1	37	(0)	2243978
13	21.1	0.0	8.6	chr2	230068523	230068580	(12124949)	+	(GGCCCGC)n	Simple_repeat	1	58	(0)	2244681
26	21.8	7.8	0.9	chr2	230712975	230713077	(11480452)	+	(CCGCAG)n	Simple_repeat	1	111	(0)	2245575
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
280	28.6	7.7	4.5	chr2	234596766	234596941	(7596588)	+	LTR81A	LTR/Gypsy	1	182	(1168)	2252242
19	20.7	0.0	0.0	chr2	234969854	234969892	(7223637)	+	(CT)n	Simple_repeat	1	39	(0)	2252852
108	26.6	0.0	0.0	chr2	234969892	234970156	(7223373)	+	(CA)n	Simple_repeat	1	265	(0)	2252853
336	29.3	7.9	2.1	chr2	234970313	234970455	(7223074)	C	MER5B	DNA/hAT-Charlie	(20)	158	7	2252854
513	29.4	14.7	4.5	chr2	234994765	234995166	(7198363)	C	LTR16A	LTR/ERVL	(0)	451	2	2252887
173	36.8	0.7	1.2	chr2	235344044	235344865	(6848664)	+	(CACACA)n	Simple_repeat	1	828	(0)	2253432
19	7.3	0.0	0.0	chr2	236168287	236168315	(6025214)	+	(CCGT)n	Simple_repeat	1	29	(0)	2254616
528	30.0	3.7	4.3	chr2	237128554	237131713	(5061816)	+	(GTGAGT)n	Simple_repeat	1	3277	(0)	2255979
571	29.5	8.6	2.4	chr2	237210591	237210955	(4982574)	C	L2a	LINE/L2	(0)	3426	2993	2256082
1145	8.3	0.0	0.0	chr2	237211156	237211299	(4982230)	C	MER4A1	LTR/ERV1	(0)	472	329	2256083
13	25.4	0.0	5.7	chr2	237475331	237475383	(4718146)	+	G-rich	Low_complexity	1	53	(0)	2256409
305	34.3	6.3	3.2	chr2	238061407	238061683	(4131846)	C	L2	LINE/L2	(438)	2981	2696	2257311
11	20.6	5.1	0.0	chr2	238096819	238096857	(4096672)	+	(AGTGCCG)n	Simple_repeat	1	41	(0)	2257364
13	19.3	9.4	0.0	chr2	238239917	238239969	(3953560)	+	G-rich	Low_complexity	1	58	(0)	2257547
19	7.4	0.0	0.0	chr2	238240349	238240377	(3953152)	+	(CGTC)n	Simple_repeat	1	29	(0)	2257548
17	14.0	0.0	0.0	chr2	238240377	238240408	(3953121)	+	(CATT)n	Simple_repeat	1	32	(0)	2257549
199	30.4	8.2	3.5	chr2	239723582	239723697	(2469832)	C	MIR3	SINE/MIR	(84)	124	3	2259250
75	41.1	0.5	0.7	chr2	239723770	239723934	(2469595)	+	(TG)n	Simple_repeat	1	164	(0)	2259251
33	9.0	0.0	3.2	chr2	239723935	239723997	(2469532)	+	(TGCATGAGTG)n	Simple_repeat	1	63	(0)	2259252
75	41.1	0.5	0.7	chr2	239723998	239724238	(2469291)	+	(TG)n	Simple_repeat	1	241	(0)	2259253
342	30.2	14.3	4.3	chr2	240821449	240821704	(1371825)	C	L1M5	LINE/L1	(2515)	3631	3346	2260411
203	32.8	0.8	2.3	chr2	240961321	240962103	(1231426)	+	(CA)n	Simple_repeat	1	789	(0)	2260545
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
12	19.1	2.6	2.6	chr2	241148957	241148994	(1044535)	+	(GCGCCG)n	Simple_repeat	1	39	(0)	2260741
333	33.8	2.9	0.0	chr2	241509180	241509312	(684217)	+	MIR	SINE/MIR	89	225	(37)	2261237
2188	9.9	2.0	1.4	chr2	241677994	241678287	(515242)	+	AluSp	SINE/Alu	1	296	(17)	2261529
1050	11.5	0.0	1.3	chr2	241686389	241686545	(506984)	+	AluJb	SINE/Alu	138	292	(20)	2261544
19	19.0	0.0	6.6	chr2	241701857	241701917	(491612)	+	(GCCCGCC)n	Simple_repeat	1	61	(0)	2261583
13	9.9	2.6	7.7	chr2	241701999	241702036	(491493)	+	(CCGC)n	Simple_repeat	1	39	(0)	2261584
55	0.0	0.0	0.0	chr2	241881595	241881641	(311888)	+	(GT)n	Simple_repeat	1	47	(0)	2261811
127	21.7	0.7	0.4	chr2	241945804	241946136	(247393)	+	(GT)n	Simple_repeat	1	334	(0)	2261877
13	9.7	0.0	0.0	chr2	241946286	241946307	(247222)	+	(AAC)n	Simple_repeat	1	22	(0)	2261878
102	36.9	0.9	0.5	chr2	242064382	242064819	(128710)	+	(CA)n	Simple_repeat	1	442	(0)	2262017
210	32.3	13.8	1.5	chr20	266606	266941	(64177226)	C	L2a	LINE/L2	(133)	3293	2910	2262508
253	30.9	8.7	2.6	chr20	267225	267417	(64176750)	+	HERVL74-int	LTR/ERVL	3071	3276	(2409)	2262509
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
16	14.7	0.0	0.0	chr20	326410	326439	(64117728)	+	(CGA)n	Simple_repeat	1	30	(0)	2262667
17	15.4	2.8	0.0	chr20	326555	326590	(64117577)	+	(GCC)n	Simple_repeat	1	37	(0)	2262668
27	30.0	0.0	0.0	chr20	326590	326674	(64117493)	+	GA-rich	Low_complexity	1	85	(0)	2262669
12	24.3	1.9	3.8	chr20	381201	381252	(64062915)	+	(CCGGAGG)n	Simple_repeat	1	53	(0)	2262814
1192	29.1	12.5	1.7	chr20	406838	407578	(64036589)	C	L2a	LINE/L2	(0)	3426	2581	2262879
245	32.2	11.9	1.7	chr20	407651	407824	(64036343)	+	MIRb	SINE/MIR	3	196	(72)	2262880
14	20.3	2.0	4.0	chr20	675602	675650	(63768517)	+	(GGCGCGG)n	Simple_repeat	1	50	(0)	2263484
13	29.1	0.0	3.5	chr20	675719	675776	(63768391)	+	(CGGCGG)n	Simple_repeat	1	58	(0)	2263485
13	27.3	3.4	1.6	chr20	728423	728481	(63715686)	+	(GGCGC)n	Simple_repeat	1	61	(0)	2263618
3778	24.1	7.5	0.9	chr20	1427227	1428375	(63015792)	+	L1MD2	LINE/L1	28	1255	(5385)	2264989
564	9.3	22.4	0.0	chr20	2524794	2524890	(61919277)	C	FLAM_C	SINE/Alu	(15)	128	4	2267111
32	7.4	0.0	0.0	chr20	2652733	2652775	(61791392)	+	(GGGCCT)n	Simple_repeat	1	43	(0)	2267367
181	28.3	6.1	0.0	chr20	2664535	2664580	(61779587)	C	L2b	LINE/L2	(2)	3373	3325	2267379
206	15.2	0.0	0.0	chr20	2873164	2873196	(61570971)	+	MIRc	SINE/MIR	121	153	(115)	2267730
15	13.9	0.0	0.0	chr20	2873523	2873546	(61570621)	+	(CG)n	Simple_repeat	1	24	(0)	2267731
17	27.7	2.4	4.6	chr20	2873554	2873638	(61570529)	+	(GCC)n	Simple_repeat	1	87	(0)	2267732
20	26.4	3.3	3.2	chr20	3046631	3046721	(61397446)	+	(AGCAGG)n	Simple_repeat	1	94	(0)	2268077
13	17.6	2.4	4.7	chr20	3072033	3072074	(61372093)	+	(CCCCG)n	Simple_repeat	1	43	(0)	2268136
2301	6.4	0.3	7.4	chr20	3160066	3160391	(61283776)	+	AluSx	SINE/Alu	3	305	(7)	2268330
12	7.2	9.8	7.1	chr20	3749664	3749714	(60694453)	+	(GGCTGGA)n	Simple_repeat	1	56	(0)	2269428
15	11.9	5.9	5.6	chr20	3767586	3767636	(60676531)	+	(GGACCG)n	Simple_repeat	1	54	(0)	2269452
12	18.6	2.1	6.1	chr20	3767755	3767802	(60676365)	+	(GCCCCC)n	Simple_repeat	1	49	(0)	2269453
2197	8.9	1.6	2.0	chr20	3926658	3926961	(60517206)	+	AluSx	SINE/Alu	1	303	(9)	2269796
26	29.4	1.2	0.0	chr20	4823230	4823314	(59620853)	+	(GCGCCCT)n	Simple_repeat	1	86	(0)	2271387
18	13.7	2.4	2.3	chr20	4823488	4823529	(59620638)	+	(CCCT)n	Simple_repeat	1	43	(0)	2271388
521	13.4	2.4	0.0	chr20	5119169	5119250	(59324917)	+	FLAM_A	SINE/Alu	44	127	(15)	2272054
232	31.5	1.1	6.3	chr20	6123719	6123813	(58320354)	C	L2a	LINE/L2	(1)	3425	3336	2273910
15	11.6	0.0	3.3	chr20	9067826	9067855	(55376312)	+	(GGA)n	Simple_repeat	1	30	(0)	2278344
206	32.8	3.8	8.1	chr20	10172558	10172706	(54271461)	+	L2a	LINE/L2	3243	3406	(20)	2280104
13	27.4	0.0	3.9	chr20	10218347	10218398	(54225769)	+	(CCCCT)n	Simple_repeat	1	52	(0)	2280183
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
24	27.4	2.1	3.1	chr20	10673536	10673629	(53770538)	+	(CGC)n	Simple_repeat	1	96	(0)	2280873
12	20.1	4.1	3.9	chr20	13220105	13220153	(51224014)	+	G-rich	Low_complexity	1	51	(0)	2284565
21	14.5	0.0	0.0	chr20	13221797	13221834	(51222333)	+	(GCT)n	Simple_repeat	1	38	(0)	2284567
345	25.5	14.0	4.4	chr20	15976216	15976375	(48467792)	+	Tigger19a	DNA/TcMar-Tigger	146	323	(0)	2288703
501	23.0	7.9	0.0	chr20	17505257	17505430	(46938737)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2290984
1064	17.4	13.2	2.0	chr20	17871151	17871491	(46572676)	C	LTR37A	LTR/ERV1	(2)	424	40	2291651
17	17.8	1.7	6.8	chr20	17968482	17968539	(46475628)	+	(GCC)n	Simple_repeat	1	59	(0)	2291818
16	25.6	0.0	4.9	chr20	20364443	20364503	(44079664)	+	(GCGG)n	Simple_repeat	1	61	(0)	2295536
18	9.7	3.0	0.0	chr20	21396154	21396186	(43047981)	+	(GCG)n	Simple_repeat	1	34	(0)	2297033
44	0.0	0.0	0.0	chr20	21506666	21506703	(42937464)	+	(GT)n	Simple_repeat	1	38	(0)	2297195
13	3.7	0.0	11.4	chr20	23421480	23421514	(41022653)	+	(CGCAGG)n	Simple_repeat	1	35	(0)	2299690
18	19.2	0.0	8.6	chr20	24469488	24469557	(39974610)	+	(CCCGGCG)n	Simple_repeat	1	70	(0)	2300952
12	19.1	2.6	2.6	chr20	25058488	25058525	(39385642)	+	(GGCCCAG)n	Simple_repeat	1	39	(0)	2301647
22	24.3	0.0	1.6	chr20	25247981	25248041	(39196126)	+	(CCCGC)n	Simple_repeat	1	61	(0)	2301899
16	20.9	0.0	0.0	chr20	30377144	30377176	(34066991)	+	(C)n	Simple_repeat	1	33	(0)	2304972
2296	8.4	0.3	0.7	chr20	31603253	31603548	(32840619)	C	AluSg	SINE/Alu	(15)	295	1	2306387
2426	6.5	0.7	0.0	chr20	31603559	31603852	(32840315)	C	AluSx	SINE/Alu	(10)	302	7	2306388
197	21.6	0.0	0.0	chr20	31606766	31606802	(32837365)	C	MER5A	DNA/hAT-Charlie	(24)	165	129	2306392
195	30.2	5.5	2.3	chr20	31606870	31606957	(32837210)	C	MIR3	SINE/MIR	(50)	158	68	2306393
640	31.0	2.2	2.7	chr20	32089725	32089967	(32354200)	C	L2c	LINE/L2	(169)	3218	2966	2307631
17	8.5	2.3	6.8	chr20	33667260	33667302	(30776865)	+	G-rich	Low_complexity	1	44	(0)	2311305
14	23.5	4.3	4.1	chr20	33686518	33686587	(30757580)	+	(GCGGC)n	Simple_repeat	1	73	(0)	2311337
15	32.0	3.4	2.2	chr20	33993917	33994005	(30450162)	+	(GCG)n	Simple_repeat	1	92	(0)	2312095
14	31.0	0.0	6.0	chr20	33994284	33994315	(30449852)	+	(GCCCCC)n	Simple_repeat	1	57	(27)	2312096
12	19.3	0.0	5.1	chr20	33994316	33994354	(30449813)	+	(CCCGCCC)n	Simple_repeat	1	39	(0)	2312097
14	14.8	0.0	3.0	chr20	34983915	34983947	(29460220)	+	GA-rich	Low_complexity	1	33	(0)	2314291
12	17.5	3.1	0.0	chr20	34983948	34983979	(29460188)	+	(TGAGGA)n	Simple_repeat	1	33	(0)	2314292
369	23.7	3.3	3.9	chr20	34984035	34984171	(29459996)	+	MIRb	SINE/MIR	38	183	(85)	2314293
875	25.2	6.1	4.0	chr20	35227353	35227625	(29216542)	+	L3	LINE/CR1	3712	3990	(109)	2314818
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
2451	6.8	1.0	0.0	chr20	35616634	35616929	(28827238)	C	AluSp	SINE/Alu	(14)	299	1	2315686
270	29.6	16.8	2.7	chr20	36236716	36236899	(28207268)	+	MIRb	SINE/MIR	34	248	(20)	2317158
2623	4.1	0.0	2.8	chr20	36383694	36384013	(28060154)	+	AluYk3	SINE/Alu	1	311	(0)	2317490
522	25.7	0.7	1.4	chr20	36384407	36384548	(28059619)	C	MIR	SINE/MIR	(26)	236	96	2317491
337	30.6	0.8	4.6	chr20	36460801	36460930	(27983237)	C	MIRb	SINE/MIR	(102)	166	42	2317682
17	26.8	1.4	4.1	chr20	36461263	36461334	(27982833)	+	(GGCC)n	Simple_repeat	1	73	(0)	2317683
6288	12.0	14.2	0.9	chr20	36676803	36677908	(27766259)	+	MER52C	LTR/ERV1	1	1278	(0)	2318177
47	0.0	0.0	0.0	chr20	36947311	36947350	(27496817)	+	(GT)n	Simple_repeat	1	40	(0)	2318862
42	0.0	0.0	0.0	chr20	36947406	36947441	(27496726)	+	(GT)n	Simple_repeat	1	36	(0)	2318862
39	2.7	0.0	0.0	chr20	36947477	36947514	(27496653)	+	(GT)n	Simple_repeat	1	38	(0)	2318862
47	0.0	0.0	0.0	chr20	36947552	36947591	(27496576)	+	(GT)n	Simple_repeat	1	40	(0)	2318862
2050	14.8	0.3	1.3	chr20	36947669	36947971	(27496196)	C	AluJb	SINE/Alu	(12)	300	1	2318863
255	32.4	1.8	2.6	chr20	37289861	37289974	(27154193)	C	MIR3	SINE/MIR	(77)	131	19	2319673
468	22.5	16.8	3.3	chr20	37289982	37290165	(27154002)	+	MIRb	SINE/MIR	13	226	(42)	2319674
186	15.2	0.0	0.0	chr20	37290157	37290189	(27153978)	+	L2b	LINE/L2	3339	3371	(4)	2319675
437	28.4	12.6	0.0	chr20	37395757	37395945	(27048222)	C	MIRb	SINE/MIR	(10)	258	35	2319938
402	31.1	11.5	2.6	chr20	37397028	37397464	(27046703)	+	L2b	LINE/L2	2832	3319	(56)	2319940
19	9.5	2.9	0.0	chr20	37397468	37397501	(27046666)	+	(ACTG)n	Simple_repeat	1	35	(0)	2319941
12	30.6	1.9	0.0	chr20	37406830	37406881	(27037286)	+	(TCTC)n	Simple_repeat	1	53	(0)	2319959
603	17.4	4.3	5.8	chr20	37406909	37407085	(27037082)	C	L1PB3	LINE/L1	(0)	6156	5990	2319960
25	11.3	0.0	0.0	chr20	37411373	37411410	(27032757)	+	(TG)n	Simple_repeat	1	38	(0)	2319977
27	20.4	8.1	1.9	chr20	37411497	37411595	(27032572)	+	(GT)n	Simple_repeat	1	107	(0)	2319978
52	5.5	4.0	0.0	chr20	37411710	37411785	(27032382)	+	(TTCCC)n	Simple_repeat	1	79	(0)	2319979
101	25.0	1.2	0.0	chr20	37412067	37412311	(27031856)	+	(GT)n	Simple_repeat	1	248	(0)	2319980
15	4.8	0.0	0.0	chr20	37413315	37413336	(27030831)	+	(TCCA)n	Simple_repeat	1	22	(0)	2319986
13	27.3	0.0	0.0	chr20	37413337	37413348	(27030819)	+	(TCTA)n	Simple_repeat	5	38	(0)	2319987
43	2.3	2.2	0.0	chr20	37422121	37422165	(27022002)	+	(TG)n	Simple_repeat	1	46	(0)	2320005
16	8.5	4.0	0.0	chr20	37422178	37422202	(27021965)	+	(TG)n	Simple_repeat	1	26	(0)	2320005
325	32.1	0.8	5.8	chr20	37422308	37422446	(27021721)	C	L1ME4a	LINE/L1	(2)	6122	5991	2320006
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
193	37.3	4.5	2.6	chr20	37901977	37902130	(26542037)	+	MIRc	SINE/MIR	20	176	(92)	2321014
38	21.7	0.0	0.0	chr20	37902225	37902301	(26541866)	+	(CA)n	Simple_repeat	1	77	(0)	2321015
545	30.8	6.7	2.6	chr20	37902481	37902710	(26541457)	C	MIRb	SINE/MIR	(18)	250	11	2321016
741	25.9	5.5	1.8	chr20	38291495	38291722	(26152445)	+	MIR	SINE/MIR	16	252	(10)	2321833
570	31.3	9.1	11.5	chr20	38337562	38338197	(26105970)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	363	2321946
225	29.0	5.5	2.8	chr20	38435664	38435734	(26008433)	+	L2a	LINE/L2	3316	3388	(38)	2322166
12	18.7	5.8	3.6	chr20	38674526	38674577	(25769590)	+	(CCCCACA)n	Simple_repeat	1	55	(0)	2322625
20	20.2	8.6	3.0	chr20	38692446	38692538	(25751629)	+	(TTCC)n	Simple_repeat	1	101	(0)	2322668
18	23.8	0.0	2.0	chr20	38926649	38926699	(25517468)	+	(GCG)n	Simple_repeat	1	51	(0)	2323167
15	33.2	1.2	2.4	chr20	40688903	40688984	(23755183)	+	(CGGAG)n	Simple_repeat	1	83	(0)	2326251
304	31.7	8.0	10.3	chr20	41340247	41340489	(23103678)	C	L2b	LINE/L2	(18)	3357	3121	2327403
190	29.2	0.0	4.4	chr20	43040474	43040541	(21403626)	C	MIR	SINE/MIR	(1)	261	197	2330321
30	5.7	0.0	0.0	chr20	43189970	43190006	(21254161)	+	(CGC)n	Simple_repeat	1	37	(0)	2330612
16	23.4	0.0	2.1	chr20	43190175	43190221	(21253946)	+	(CGCCG)n	Simple_repeat	1	47	(0)	2330613
286	32.1	6.8	0.9	chr20	44116720	44116829	(20327338)	+	MIRb	SINE/MIR	117	233	(35)	2332674
2574	5.7	0.0	0.0	chr20	44116999	44117298	(20326869)	+	AluSc5	SINE/Alu	1	300	(9)	2332675
257	28.5	2.5	8.5	chr20	44311476	44311650	(20132517)	+	MIR3	SINE/MIR	43	207	(55)	2333149
201	11.4	2.8	0.0	chr20	44475680	44475714	(19968453)	+	MIR3	SINE/MIR	104	139	(69)	2333612
227	16.2	0.0	0.0	chr20	44475684	44475720	(19968447)	+	MIRc	SINE/MIR	112	148	(120)	2333613
486	26.2	8.0	1.2	chr20	44780156	44780317	(19663850)	+	MER104	DNA/TcMar-Tc2	4	177	(4)	2334322
227	22.8	5.0	0.0	chr20	44780459	44780515	(19663652)	+	MamTip2	DNA/hAT-Tip100	82	141	(164)	2334323
595	28.7	9.1	1.7	chr20	44780534	44780767	(19663400)	C	MIRb	SINE/MIR	(7)	261	9	2334324
14	13.9	2.2	6.5	chr20	44885524	44885568	(19558599)	+	(CCCTGC)n	Simple_repeat	1	46	(0)	2334594
33	26.3	0.0	0.0	chr20	44885718	44885803	(19558364)	+	(CCG)n	Simple_repeat	1	86	(0)	2334595
192	18.2	0.0	0.0	chr20	44910431	44910463	(19533704)	C	MIRc	SINE/MIR	(122)	146	114	2334634
577	31.5	12.6	0.6	chr20	44960570	44960882	(19483285)	C	L2a	LINE/L2	(54)	3372	3017	2334744
599	32.4	3.2	0.5	chr20	45792231	45792444	(18651723)	+	MIR	SINE/MIR	37	256	(6)	2336217
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
13	32.3	1.6	0.0	chr20	45935022	45935085	(18509082)	+	(CCTCCG)n	Simple_repeat	1	65	(0)	2336592
339	29.6	9.0	0.0	chr20	46230733	46230864	(18213303)	+	MIR	SINE/MIR	80	224	(38)	2337236
193	30.1	6.4	0.0	chr20	46230858	46230930	(18213237)	C	MIRb	SINE/MIR	(157)	111	34	2337235
478	22.8	4.5	0.7	chr20	46231311	46231460	(18212707)	+	MER5B	DNA/hAT-Charlie	1	156	(22)	2337237
18	29.9	1.4	0.0	chr20	46308362	46308426	(18135741)	+	G-rich	Low_complexity	1	66	(0)	2337418
36	6.7	0.0	0.0	chr20	46308427	46308473	(18135694)	+	(GAGCGAGA)n	Simple_repeat	1	47	(0)	2337419
18	14.1	0.0	8.9	chr20	46364476	46364531	(18079636)	+	G-rich	Low_complexity	1	56	(0)	2337537
12	20.8	0.0	2.9	chr20	46364531	46364565	(18079602)	+	(GTCTG)n	Simple_repeat	1	35	(0)	2337538
3053	18.2	4.5	2.4	chr20	46683147	46683776	(17760391)	+	LTR9D	LTR/ERV1	1	644	(1)	2338214
524	26.8	16.2	1.4	chr20	46683839	46684122	(17760045)	+	L2a	LINE/L2	2671	3004	(415)	2338215
12	16.5	4.0	10.3	chr20	46709567	46709641	(17734526)	+	(GGCG)n	Simple_repeat	1	78	(0)	2338278
213	26.3	6.6	9.5	chr20	46710104	46710229	(17733938)	C	L2a	LINE/L2	(19)	3407	3286	2338279
319	22.9	22.4	0.0	chr20	47501517	47501634	(16942533)	+	MIR	SINE/MIR	111	262	(0)	2340295
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
238	26.5	5.7	2.4	chr20	48523333	48523417	(15920750)	+	UCON12	Unknown	424	511	(9)	2342279
12	10.7	2.9	5.7	chr20	48922075	48922108	(15522059)	+	(CTCGGC)n	Simple_repeat	1	35	(0)	2343220
237	33.9	8.3	0.0	chr20	48922142	48922262	(15521905)	C	MIR1_Amn	SINE/MIR	(78)	152	21	2343221
610	30.1	0.6	0.0	chr20	49047115	49047297	(15396870)	+	MIR	SINE/MIR	12	195	(67)	2343479
29	13.1	5.0	0.0	chr20	49483055	49483144	(14961023)	+	(CTTT)n	Simple_repeat	1	94	(0)	2344537
447	23.5	15.8	0.6	chr20	49914864	49915034	(14529133)	C	MIRb	SINE/MIR	(0)	268	67	2345601
397	29.9	4.5	9.3	chr20	49982121	49982378	(14461789)	+	L2b	LINE/L2	3130	3374	(1)	2345773
1659	13.2	2.6	9.8	chr20	50070892	50071218	(14372949)	+	AluJr	SINE/Alu	10	312	(0)	2346021
191	32.0	8.1	2.3	chr20	50154234	50154361	(14289806)	C	L2b	LINE/L2	(29)	3346	3211	2346211
235	30.7	2.6	0.0	chr20	50154371	50154445	(14289722)	C	MIRb	SINE/MIR	(15)	253	177	2346212
18	15.0	4.1	3.9	chr20	50190916	50190964	(14253203)	+	(GCA)n	Simple_repeat	1	51	(0)	2346323
19	11.2	5.1	0.0	chr20	51023134	51023172	(13420995)	+	GA-rich	Low_complexity	1	41	(0)	2348236
14	0.0	4.8	0.0	chr20	52972324	52972344	(11471823)	+	(GGA)n	Simple_repeat	1	22	(0)	2352541
46	19.3	0.7	0.0	chr20	52972406	52972558	(11471609)	+	(TG)n	Simple_repeat	1	154	(0)	2352542
432	21.2	5.0	11.4	chr20	56736732	56736792	(7707375)	+	MIR	SINE/MIR	104	160	(102)	2359734
2374	9.3	0.7	0.0	chr20	56736793	56737102	(7707065)	+	AluSx	SINE/Alu	1	312	(0)	2359735
173	34.7	0.8	1.0	chr20	56804968	56805679	(7638488)	+	(CA)n	Simple_repeat	1	718	(0)	2359908
13	18.3	5.4	0.0	chr20	56925242	56925278	(7518889)	+	(GCG)n	Simple_repeat	1	39	(0)	2360189
247	27.8	7.1	2.4	chr20	57082682	57082932	(7361235)	C	L2a	LINE/L2	(312)	3114	2845	2360507
609	33.8	7.0	0.3	chr20	57083580	57083870	(7360297)	C	L1MC4	LINE/L1	(184)	7858	7547	2360508
34	40.4	0.0	0.0	chr20	57092358	57092524	(7351643)	+	(CA)n	Simple_repeat	1	167	(0)	2360524
841	8.6	0.0	1.7	chr20	57350954	57351071	(7093096)	C	AluSx	SINE/Alu	(196)	116	1	2361034
310	34.7	12.9	1.4	chr20	58619581	58619855	(5824312)	C	L2a	LINE/L2	(5)	3421	3111	2363249
336	29.8	5.5	0.0	chr20	59567732	59567852	(4876315)	C	L2b	LINE/L2	(3)	3372	3245	2364660
99	24.6	0.4	0.8	chr20	59567880	59568121	(4876046)	+	(GT)n	Simple_repeat	1	243	(0)	2364661
281	37.9	3.5	2.8	chr20	59765829	59765972	(4678195)	+	MIRb	SINE/MIR	92	236	(32)	2365008
249	30.0	9.1	0.9	chr20	60589810	60589920	(3854247)	C	LTR89	LTR/ERVL?	(486)	393	273	2366182
22	22.4	3.9	2.5	chr20	61952051	61952127	(2492040)	+	(GCACAC)n	Simple_repeat	1	80	(0)	2367934
761	24.4	11.4	8.5	chr20	61952563	61952952	(2491215)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	65	2367935
18	28.9	0.8	7.4	chr20	61965597	61965716	(2478451)	+	(CCCGCCA)n	Simple_repeat	1	121	(0)	2367958
29	18.0	1.8	8.0	chr20	61965840	61965976	(2478191)	+	(CTGCCC)n	Simple_repeat	1	128	(0)	2367959
262	23.1	0.0	0.0	chr20	61966068	61966119	(2478048)	C	MIR	SINE/MIR	(103)	159	108	2367960
17	24.5	1.6	3.2	chr20	62122132	62122192	(2321975)	+	(CCGC)n	Simple_repeat	1	62	(0)	2368176
33	24.1	5.1	3.7	chr20	62220118	62220273	(2223894)	+	(CGGAGC)n	Simple_repeat	1	164	(0)	2368302
30	12.7	2.9	9.3	chr20	62220278	62220381	(2223786)	+	(CGCCC)n	Simple_repeat	1	107	(0)	2368303
133	27.2	0.3	0.0	chr20	62592862	62593191	(1850976)	+	(GTGT)n	Simple_repeat	1	331	(0)	2368734
15	0.0	0.0	0.0	chr20	62929696	62929712	(1514455)	+	(TA)n	Simple_repeat	1	17	(0)	2369101
12	25.4	1.1	2.2	chr20	62972672	62972736	(1471431)	+	G-rich	Low_complexity	1	64	(0)	2369143
26	29.9	1.3	6.3	chr20	63006392	63006547	(1437620)	+	(CGC)n	Simple_repeat	1	158	(0)	2369180
584	25.7	10.4	2.7	chr20	63032932	63033460	(1410707)	+	MER45B	DNA/hAT-Tip100	364	978	(62)	2369212
310	30.3	2.3	0.5	chr20	63056910	63057442	(1386725)	+	(TCAT)n	Simple_repeat	1	546	(0)	2369232
27	6.4	3.9	1.9	chr20	63057443	63057493	(1386674)	+	(TTCACTCA)n	Simple_repeat	1	53	(0)	2369233
310	30.3	2.3	0.5	chr20	63057494	63057993	(1386174)	+	(TCAT)n	Simple_repeat	3	508	(0)	2369234
656	23.9	6.9	5.7	chr20	63082608	63082908	(1361259)	+	LTR16E1	LTR/ERVL	216	520	(18)	2369253
43	27.1	2.9	4.7	chr20	63216006	63216212	(1227955)	+	(GGC)n	Simple_repeat	1	213	(0)	2369380
183	15.9	8.3	0.0	chr20	63291209	63291252	(1152915)	C	L2b	LINE/L2	(74)	3301	3254	2369456
2142	11.8	0.0	0.0	chr20	63291561	63291847	(1152320)	+	AluSq2	SINE/Alu	5	291	(22)	2369457
13	11.7	3.6	0.0	chr20	63378597	63378624	(1065543)	+	(TTCA)n	Simple_repeat	1	29	(0)	2369525
193	21.2	0.0	0.0	chr20	63846951	63847337	(596830)	+	(CA)n	Simple_repeat	1	387	(0)	2370123
12	21.9	1.9	5.6	chr20	63847588	63847640	(596527)	+	(CTGCCC)n	Simple_repeat	1	54	(0)	2370124
2298	9.7	0.0	1.0	chr20	63864482	63864792	(579375)	+	AluSq2	SINE/Alu	6	313	(0)	2370148
2045	12.6	0.3	1.7	chr20	64103052	64103353	(340814)	+	AluJb	SINE/Alu	14	311	(1)	2370502
1357	25.4	5.7	2.3	chr20	64103368	64103846	(340321)	+	MLT1F1	LTR/ERVL-MaLR	74	569	(0)	2370503
3223	13.1	0.6	2.1	chr21	15752928	15753451	(30956532)	C	LTR72	LTR/ERV1	(0)	519	4	2379585
12	5.6	0.0	0.0	chr21	17612698	17612716	(29097267)	+	(CCG)n	Simple_repeat	1	19	(0)	2381936
18	17.4	2.1	2.1	chr21	25607182	25607228	(21102755)	+	(CCCCTG)n	Simple_repeat	1	48	(0)	2392718
12	19.1	5.9	3.7	chr21	26170687	26170737	(20539246)	+	(CCG)n	Simple_repeat	1	54	(0)	2393604
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
36	25.1	2.8	0.9	chr21	31410672	31410797	(15299186)	+	GA-rich	Low_complexity	1	128	(0)	2401278
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
14	15.6	3.4	8.2	chr21	31659922	31659980	(15050003)	+	(GCCCG)n	Simple_repeat	1	61	(0)	2401850
28	20.6	7.3	1.7	chr21	31660030	31660138	(15049845)	+	G-rich	Low_complexity	1	117	(0)	2401851
33	17.4	1.4	1.4	chr21	31732160	31732232	(14977751)	+	(CGCCC)n	Simple_repeat	1	74	(0)	2401953
65	22.5	0.0	0.0	chr21	32977698	32977911	(13732072)	+	(GT)n	Simple_repeat	1	214	(0)	2404097
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
17	2.5	15.0	0.0	chr21	34073155	34073194	(12636789)	+	(GCACGC)n	Simple_repeat	1	46	(0)	2406104
453	22.4	2.4	7.3	chr21	36070654	36070831	(10639152)	C	L1MC4a	LINE/L1	(14)	7868	7700	2409085
2347	6.7	0.7	1.4	chr21	36319433	36319729	(10390254)	C	AluSp	SINE/Alu	(18)	295	1	2409607
15	24.4	2.1	0.0	chr21	36989779	36989826	(9720157)	+	G-rich	Low_complexity	1	49	(0)	2410805
408	31.0	4.4	2.5	chr21	37258211	37258412	(9451571)	+	LTR51	LTR/ERV1	228	433	(238)	2411248
19	9.4	0.0	2.8	chr21	37267194	37267233	(9442750)	+	(CCCACC)n	Simple_repeat	1	38	(0)	2411267
4939	4.1	0.2	2.0	chr21	37596514	37597068	(9112915)	+	LTR10C	LTR/ERV1	1	555	(36)	2411848
1009	30.0	3.4	2.3	chr21	37631452	37631799	(9078184)	+	L1ME3F	LINE/L1	47	398	(5844)	2411892
508	31.9	9.7	7.4	chr21	37631966	37632236	(9077747)	+	L1ME3F	LINE/L1	237	514	(5728)	2411892
3883	26.3	8.4	3.6	chr21	37632220	37634053	(9075930)	+	L1ME3F	LINE/L1	2815	4744	(1402)	2411892
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
877	7.7	3.7	2.3	chr21	38979196	38979328	(7730655)	C	L1PA13	LINE/L1	(1)	6162	6028	2413809
978	10.2	9.2	0.0	chr21	38979329	38979485	(7730498)	C	L1PA13	LINE/L1	(574)	5592	5420	2413809
151	35.2	1.1	0.3	chr21	39012659	39013269	(7696714)	+	(CA)n	Simple_repeat	1	618	(0)	2413855
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
821	13.8	0.0	0.0	chr21	39183687	39183802	(7526181)	C	AluJo	SINE/Alu	(196)	116	1	2414126
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
1882	15.8	2.3	0.3	chr21	39518093	39518396	(7191587)	+	AluJo	SINE/Alu	1	310	(2)	2414740
3390	25.9	3.0	1.9	chr21	40335734	40336709	(6373274)	+	Charlie1a	DNA/hAT-Charlie	6	992	(463)	2415860
12	9.2	0.0	4.0	chr21	42010306	42010330	(4699653)	+	(CGC)n	Simple_repeat	1	25	(0)	2418306
21	23.4	5.6	2.1	chr21	42010422	42010510	(4699473)	+	G-rich	Low_complexity	1	94	(0)	2418307
133	15.6	11.9	5.1	chr21	42670034	42670824	(4039159)	+	(TTCACAC)n	Simple_repeat	1	885	(0)	2419161
12	0.0	3.9	7.4	chr21	42768911	42768936	(3941047)	+	(TGGT)n	Simple_repeat	1	27	(0)	2419289
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
1966	12.3	0.3	3.9	chr21	43659016	43659324	(3050659)	+	AluJr	SINE/Alu	1	298	(14)	2420579
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
496	25.2	1.4	1.4	chr21	43787469	43787609	(2922374)	+	MLT1C	LTR/ERVL-MaLR	42	182	(285)	2420805
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
27	8.8	1.4	9.5	chr21	44299996	44300068	(2409915)	+	G-rich	Low_complexity	1	74	(0)	2421591
268	27.8	4.0	0.0	chr21	44443861	44443957	(2266026)	C	L1MB3	LINE/L1	(15)	6168	6068	2421751
4857	11.3	5.8	3.7	chr21	44485340	44486157	(2223826)	+	LTR1A2	LTR/ERV1	1	837	(0)	2421815
45	21.2	4.0	6.7	chr21	44706298	44706498	(2003485)	+	(CACG)n	Simple_repeat	1	209	(0)	2422050
384	26.3	10.5	0.0	chr21	45012451	45012587	(1697396)	C	MLT1D	LTR/ERVL-MaLR	(352)	153	1	2422406
59	1.9	0.0	0.0	chr21	45646054	45646108	(1063875)	+	(TC)n	Simple_repeat	1	55	(0)	2423036
35	0.0	0.0	0.0	chr21	45646109	45646146	(1063837)	+	(GT)n	Simple_repeat	1	38	(0)	2423037
101	11.3	4.4	0.0	chr21	45981572	45981752	(728231)	+	(CCTCC)n	Simple_repeat	1	189	(0)	2423392
44	0.0	0.0	0.0	chr21	46228816	46228856	(481127)	+	(CCCGCCCCT)n	Simple_repeat	1	41	(0)	2423635
235	22.1	3.4	5.5	chr21	46323663	46323753	(386230)	+	LTR16A	LTR/ERVL	135	223	(228)	2423811
381	30.9	9.0	5.7	chr21	46457528	46457721	(252262)	C	ERV3-16A3_I-int	LTR/ERVL	(4704)	522	315	2423961
574	23.4	11.4	1.2	chr21	46457931	46458103	(251880)	C	LTR16A	LTR/ERVL	(0)	451	259	2423977
12	17.7	1.2	13.1	chr21	46635981	46636063	(73920)	+	(CGCCCA)n	Simple_repeat	1	84	(0)	2424209
15	12.2	0.0	0.0	chr22	17120321	17120347	(33698121)	+	(GTG)n	Simple_repeat	1	27	(0)	2428248
15	20.1	0.0	0.0	chr22	17120597	17120630	(33697838)	+	(GCA)n	Simple_repeat	1	34	(0)	2428249
23	20.8	2.0	0.0	chr22	17264576	17264625	(33553843)	+	(CT)n	Simple_repeat	1	51	(0)	2428600
2183	11.2	0.7	0.3	chr22	17570491	17570785	(33247683)	C	AluSx	SINE/Alu	(16)	296	1	2429262
414	32.0	9.2	1.1	chr22	17570880	17571133	(33247335)	C	L2c	LINE/L2	(187)	3200	2938	2429263
186	27.3	3.5	0.0	chr22	19172217	19172271	(31646197)	+	L3	LINE/CR1	3936	3992	(107)	2431569
23	25.8	6.0	4.4	chr22	19175759	19175909	(31642559)	+	(GGCACAG)n	Simple_repeat	1	160	(0)	2431571
1650	18.6	10.1	0.0	chr22	20000638	20000965	(30817503)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2432776
21	31.8	1.0	2.0	chr22	20000966	20001056	(30817412)	+	(CACACA)n	Simple_repeat	4	93	(0)	2432777
14	18.7	2.2	4.3	chr22	20117136	20117181	(30701287)	+	(CCGC)n	Simple_repeat	1	47	(0)	2432924
13	18.4	1.2	4.9	chr22	20117489	20117554	(30700914)	+	G-rich	Low_complexity	1	63	(0)	2432925
16	19.9	0.0	2.4	chr22	20704086	20704127	(30114341)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	2433785
12	22.2	7.7	0.0	chr22	20704302	20704353	(30114115)	+	(GCCGCT)n	Simple_repeat	1	56	(0)	2433786
216	34.1	7.1	0.0	chr22	21001558	21001648	(29816820)	C	MIR	SINE/MIR	(126)	136	39	2434375
14	17.6	0.0	0.0	chr22	21629314	21629345	(29189123)	+	(GCACGT)n	Simple_repeat	1	32	(0)	2435563
17	20.7	5.7	2.7	chr22	21735873	21735942	(29082526)	+	(CCCGCCT)n	Simple_repeat	1	74	(0)	2435786
20	8.8	0.0	5.0	chr22	21736077	21736116	(29082352)	+	(GGGGC)n	Simple_repeat	1	40	(0)	2435787
12	15.1	2.3	6.8	chr22	21938425	21938467	(28880001)	+	(GAGCGA)n	Simple_repeat	1	44	(0)	2436248
28	14.3	1.5	4.4	chr22	21938582	21938648	(28879820)	+	A-rich	Low_complexity	1	68	(0)	2436249
299	29.2	6.6	0.0	chr22	21938763	21938875	(28879593)	C	MER5C	DNA/hAT-Charlie	(49)	264	144	2436250
2321	10.3	0.0	0.0	chr22	23766452	23766751	(27051717)	C	AluSx3	SINE/Alu	(11)	300	1	2438935
253	22.6	7.2	0.0	chr22	23767036	23767147	(27051321)	+	MIR1_Amn	SINE/MIR	35	153	(55)	2438936
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
589	29.8	1.8	4.9	chr22	24011633	24011858	(26806610)	C	MIRb	SINE/MIR	(7)	261	43	2439360
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
965	6.2	0.0	4.9	chr22	24556371	24556520	(26261948)	C	AluJb	SINE/Alu	(82)	220	1	2440240
299	35.0	2.4	1.6	chr22	24603351	24603472	(26214996)	+	MIR3	SINE/MIR	34	156	(52)	2440331
210	20.6	0.5	0.7	chr22	24633505	24633942	(26184526)	+	(GT)n	Simple_repeat	1	440	(0)	2440381
3463	6.0	0.0	0.7	chr22	24691086	24691536	(26126932)	C	LTR7	LTR/ERV1	(2)	448	1	2440483
2376	8.7	0.3	0.3	chr22	24805407	24805716	(26012752)	C	AluSz	SINE/Alu	(1)	311	2	2440683
17	7.7	0.0	3.3	chr22	24805729	24805758	(26012710)	+	(AAT)n	Simple_repeat	1	30	(0)	2440684
344	22.6	0.9	11.7	chr22	24805800	24805919	(26012549)	C	MIRb	SINE/MIR	(45)	223	117	2440685
219	27.8	0.0	0.0	chr22	26555903	26555956	(24262512)	C	MIRc	SINE/MIR	(167)	101	48	2444601
1319	24.4	10.7	3.0	chr22	26555960	26556256	(24262212)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	191	2444602
753	23.1	4.4	2.5	chr22	26922798	26922997	(23895471)	C	MIR	SINE/MIR	(0)	262	59	2445484
15	25.3	2.4	0.0	chr22	27416087	27416128	(23402340)	+	(AC)n	Simple_repeat	1	43	(0)	2446642
26	19.2	1.9	0.0	chr22	27416377	27416430	(23402038)	+	(AC)n	Simple_repeat	1	55	(0)	2446643
21	24.4	5.1	1.2	chr22	27919212	27919290	(22899178)	+	(GCC)n	Simple_repeat	1	83	(0)	2447727
25	27.8	3.2	5.5	chr22	28679779	28679936	(22138532)	+	(CGCGCCC)n	Simple_repeat	1	163	(0)	2448922
2461	6.3	0.3	0.0	chr22	28680332	28680630	(22137838)	C	AluY	SINE/Alu	(11)	300	1	2448923
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
21	27.6	0.0	5.4	chr22	28800218	28800309	(22018159)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	2449228
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
285	25.5	8.1	1.9	chr22	29266849	29266952	(21551516)	+	L2c	LINE/L2	3057	3167	(220)	2450238
287	25.2	5.7	5.3	chr22	29267490	29267630	(21550838)	+	MIR3	SINE/MIR	42	184	(24)	2450245
13	14.0	0.0	5.7	chr22	29306273	29306307	(21512161)	+	(GCCCA)n	Simple_repeat	1	35	(0)	2450301
232	12.4	0.6	0.0	chr22	29306448	29306497	(21511971)	+	MIRc	SINE/MIR	90	144	(124)	2450302
14	22.2	5.5	3.9	chr22	29481001	29481080	(21337388)	+	(GCGACGC)n	Simple_repeat	1	81	(0)	2450661
11	25.3	0.0	5.8	chr22	29580899	29580950	(21237518)	+	(CAGCCC)n	Simple_repeat	1	52	(0)	2450909
287	24.8	10.6	0.0	chr22	29581240	29581340	(21237128)	+	MIR3	SINE/MIR	43	155	(53)	2450910
13	30.4	1.6	1.6	chr22	30258249	30258310	(20560158)	+	A-rich	Low_complexity	1	63	(0)	2452249
453	24.8	8.7	0.7	chr22	30356405	30356542	(20461926)	C	MER5A1	DNA/hAT-Charlie	(0)	166	17	2452430
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
368	29.6	4.9	2.9	chr22	31211893	31212031	(19606437)	+	MIR3	SINE/MIR	20	161	(47)	2454270
14	16.4	2.9	0.0	chr22	31212128	31212161	(19606307)	+	(GCCAGA)n	Simple_repeat	1	35	(0)	2454271
13	21.7	3.4	4.9	chr22	31212162	31212220	(19606248)	+	G-rich	Low_complexity	1	61	(0)	2454272
272	29.9	3.0	8.0	chr22	31347732	31347869	(19470599)	+	MIRc	SINE/MIR	45	175	(93)	2454550
193	25.6	0.0	0.0	chr22	31662518	31662560	(19155908)	C	MIR3	SINE/MIR	(46)	162	120	2455316
16	12.1	5.6	0.0	chr22	31944032	31944067	(18874401)	+	G-rich	Low_complexity	1	38	(0)	2456006
14	5.0	0.0	0.0	chr22	31944332	31944352	(18874116)	+	(GGC)n	Simple_repeat	1	21	(0)	2456007
13	27.3	0.0	2.0	chr22	31944395	31944444	(18874024)	+	(CCCGCCC)n	Simple_repeat	1	50	(0)	2456008
375	25.4	3.5	2.6	chr22	32106928	32107040	(18711428)	C	MIR3	SINE/MIR	(10)	198	85	2456387
229	34.1	8.2	3.1	chr22	32107385	32107511	(18710957)	+	MIRc	SINE/MIR	2	135	(133)	2456388
14	20.8	6.0	0.0	chr22	32176044	32176093	(18642375)	+	(GCCCGCT)n	Simple_repeat	1	53	(0)	2456510
14	4.5	4.3	0.0	chr22	32176160	32176182	(18642286)	+	(GCC)n	Simple_repeat	1	24	(0)	2456511
3206	25.1	6.8	5.5	chr22	32203087	32206587	(18611881)	C	REP522	Satellite/telo	(94)	3546	1	2456556
18	4.8	0.0	0.0	chr22	34415162	34415183	(16403285)	+	(GT)n	Simple_repeat	1	22	(0)	2461000
212	29.3	18.8	0.0	chr22	35351108	35351269	(15467199)	+	MIRb	SINE/MIR	11	200	(68)	2462757
1460	20.1	5.8	1.7	chr22	35399548	35399846	(15418622)	+	AluJb	SINE/Alu	1	312	(0)	2462903
12	18.3	0.0	3.0	chr22	35840509	35840541	(14977927)	+	(CCCCTC)n	Simple_repeat	1	33	(0)	2463826
38	5.0	0.0	0.0	chr22	35840616	35840657	(14977811)	+	(GT)n	Simple_repeat	1	42	(0)	2463827
695	24.6	5.8	1.0	chr22	36066521	36066717	(14751751)	C	MIR	SINE/MIR	(10)	252	46	2464277
73	1.5	0.0	0.0	chr22	36703761	36703827	(14114641)	+	(CT)n	Simple_repeat	1	67	(0)	2465663
265	31.8	11.7	0.8	chr22	37420630	37420759	(13397709)	+	MIR	SINE/MIR	74	219	(43)	2467182
242	25.8	6.0	1.9	chr22	37420796	37420915	(13397553)	+	MIRb	SINE/MIR	57	187	(81)	2467183
219	34.1	5.5	3.5	chr22	37420958	37421100	(13397368)	C	MER5A	DNA/hAT-Charlie	(10)	179	34	2467184
303	33.3	1.6	3.2	chr22	37420981	37421104	(13397364)	+	MER5A	DNA/hAT-Charlie	50	171	(18)	2467185
17	21.8	0.0	0.0	chr22	37426341	37426374	(13392094)	+	(CA)n	Simple_repeat	1	34	(0)	2467200
26	5.5	2.5	2.4	chr22	37426483	37426522	(13391946)	+	(CA)n	Simple_repeat	1	41	(0)	2467201
18	8.7	0.0	0.0	chr22	37426600	37426624	(13391844)	+	(CA)n	Simple_repeat	1	25	(0)	2467202
33	3.1	0.0	0.0	chr22	37426638	37426670	(13391798)	+	(CA)n	Simple_repeat	1	33	(0)	2467202
28	3.3	0.0	0.0	chr22	37427363	37427393	(13391075)	+	(GTGTGA)n	Simple_repeat	1	31	(0)	2467204
14	28.6	5.1	1.2	chr22	37427395	37427435	(13391033)	+	(GCGTGT)n	Simple_repeat	1	80	(0)	2467205
16	23.3	0.0	0.0	chr22	37427436	37427470	(13390998)	+	(GT)n	Simple_repeat	1	35	(0)	2467206
17	20.6	4.0	0.0	chr22	37427473	37427522	(13390946)	+	(CGCCGC)n	Simple_repeat	1	52	(0)	2467207
18	15.1	4.3	2.0	chr22	37427584	37427630	(13390838)	+	(GTCC)n	Simple_repeat	1	49	(0)	2467208
253	29.3	1.1	7.1	chr22	37608260	37608358	(13210110)	+	MIRb	SINE/MIR	160	252	(16)	2467650
13	16.1	0.0	0.0	chr22	37639434	37639461	(13179007)	+	G-rich	Low_complexity	1	28	(0)	2467706
12	21.6	0.0	0.0	chr22	37639593	37639624	(13178844)	+	G-rich	Low_complexity	1	32	(0)	2467707
2032	13.2	1.6	0.7	chr22	37685758	37686060	(13132408)	+	AluSz	SINE/Alu	7	312	(0)	2467833
193	23.2	12.5	0.0	chr22	37686095	37686150	(13132318)	C	L2b	LINE/L2	(3)	3423	3360	2467834
30	3.1	0.0	0.0	chr22	37805259	37805291	(13013177)	+	(GAGGCA)n	Simple_repeat	1	33	(0)	2468119
312	28.7	3.2	2.4	chr22	38034346	38034469	(12783999)	+	MIRb	SINE/MIR	40	163	(67)	2468664
466	23.7	10.5	1.1	chr22	38034524	38034679	(12783789)	+	MIR	SINE/MIR	3	170	(92)	2468665
12	7.4	0.0	11.1	chr22	38214831	38214866	(12603602)	+	(CCCGG)n	Simple_repeat	1	36	(0)	2469052
2290	11.2	0.0	0.0	chr22	38512802	38513097	(12305371)	+	AluSx	SINE/Alu	1	296	(16)	2469654
14	4.9	0.0	0.0	chr22	38570451	38570471	(12247997)	+	(GAGG)n	Simple_repeat	1	21	(0)	2469801
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
437	21.2	17.5	7.3	chr22	38682486	38682704	(12135764)	+	MIRb	SINE/MIR	12	257	(11)	2470103
196	25.9	1.4	0.2	chr22	38761591	38762101	(12056367)	+	(GT)n	Simple_repeat	1	518	(0)	2470220
16	4.3	0.0	3.9	chr22	38824868	38824893	(11993575)	+	(CTC)n	Simple_repeat	1	26	(0)	2470347
434	29.2	1.9	2.5	chr22	39144849	39145006	(11673462)	C	MIR	SINE/MIR	(78)	184	28	2470986
17	7.0	3.3	0.0	chr22	39145272	39145301	(11673167)	+	(CGCCG)n	Simple_repeat	1	31	(0)	2470987
203	27.9	1.6	4.7	chr22	39171303	39171366	(11647102)	C	MIR	SINE/MIR	(193)	69	8	2471047
380	32.2	2.1	0.0	chr22	39171388	39171530	(11646938)	C	MIR3	SINE/MIR	(53)	155	10	2471048
20	22.1	0.0	0.0	chr22	39174607	39174648	(11643820)	+	(T)n	Simple_repeat	1	42	(0)	2471054
25	33.6	1.7	1.6	chr22	39242071	39242190	(11576278)	+	(CGTG)n	Simple_repeat	1	122	(0)	2471184
183	31.7	4.7	1.2	chr22	39310843	39310925	(11507543)	+	MIR3	SINE/MIR	11	96	(112)	2471355
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
1087	12.1	0.0	0.0	chr22	39399407	39399555	(11418913)	+	AluSx1	SINE/Alu	149	297	(15)	2471576
30	0.0	5.7	0.0	chr22	39399587	39399621	(11418847)	+	(ACA)n	Simple_repeat	1	37	(0)	2471577
18	28.3	4.6	1.1	chr22	39456974	39457060	(11361408)	+	(CGCA)n	Simple_repeat	1	91	(0)	2471690
13	14.7	3.3	0.0	chr22	39520440	39520469	(11297999)	+	G-rich	Low_complexity	1	31	(0)	2471815
272	33.3	3.3	2.5	chr22	39535237	39535356	(11283112)	+	MIR	SINE/MIR	79	199	(63)	2471838
207	38.1	0.5	1.5	chr22	39623160	39624212	(11194256)	+	(TG)n	Simple_repeat	1	1058	(0)	2472050
202	35.1	6.4	2.2	chr22	39624628	39624761	(11193707)	C	MIR3	SINE/MIR	(8)	200	61	2472051
187	32.8	1.6	0.0	chr22	40346274	40346334	(10472134)	C	MIR	SINE/MIR	(102)	160	99	2473377
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
12	12.6	0.0	3.6	chr22	40370878	40370905	(10447563)	+	G-rich	Low_complexity	1	28	(0)	2473431
1937	13.1	6.0	2.1	chr22	40818437	40818726	(9999742)	+	AluJr	SINE/Alu	2	303	(9)	2474431
32	5.3	0.0	0.0	chr22	41544351	41544389	(9274079)	+	(CGCCA)n	Simple_repeat	1	39	(0)	2476153
22	17.4	5.2	0.0	chr22	41544391	41544448	(9274020)	+	(CGCACCA)n	Simple_repeat	1	61	(0)	2476154
15	17.7	2.1	4.1	chr22	41620709	41620756	(9197712)	+	(CCTGCCC)n	Simple_repeat	1	49	(0)	2476343
23	20.5	1.6	4.1	chr22	41910210	41910277	(8908191)	+	G-rich	Low_complexity	1	66	(0)	2477040
286	12.0	6.9	0.0	chr22	42493354	42493414	(8325054)	+	MLT2B2	LTR/ERVL	503	567	(0)	2478196
483	22.7	9.2	0.0	chr22	42493526	42493644	(8324824)	C	MER5A1	DNA/hAT-Charlie	(3)	163	33	2478197
1379	17.5	3.1	7.9	chr22	42493685	42493875	(8324593)	+	MER33	DNA/hAT-Charlie	1	191	(133)	2478198
2366	10.6	0.0	0.0	chr22	42493876	42494176	(8324292)	+	AluSc	SINE/Alu	2	302	(7)	2478199
13	21.6	6.2	0.0	chr22	42519858	42519905	(8298563)	+	(CCCGC)n	Simple_repeat	1	51	(0)	2478260
16	26.1	0.0	3.5	chr22	42649136	42649193	(8169275)	+	G-rich	Low_complexity	1	58	(0)	2478570
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
217	25.8	5.1	4.1	chr22	42867432	42867528	(7950940)	+	MIR3	SINE/MIR	85	182	(26)	2479122
184	34.0	4.1	2.1	chr22	43143535	43143630	(7674838)	+	L2a	LINE/L2	3327	3424	(2)	2479694
29	15.4	5.4	1.3	chr22	43151471	43151544	(7666924)	+	(GGCGG)n	Simple_repeat	1	78	(0)	2479719
388	36.7	7.8	3.2	chr22	43275455	43275857	(7542611)	C	L2b	LINE/L2	(35)	3340	2918	2479920
211	31.6	8.4	3.9	chr22	43812772	43812873	(7005595)	+	L2b	LINE/L2	3269	3375	(0)	2480823
620	23.6	10.2	6.0	chr22	43812946	43813179	(7005289)	C	MIR	SINE/MIR	(16)	246	2	2480824
1333	19.0	16.4	1.6	chr22	43868171	43868614	(6949854)	C	LTR49	LTR/ERV1	(72)	523	1	2480907
327	24.6	13.4	4.3	chr22	43892240	43892354	(6926114)	C	MIRc	SINE/MIR	(95)	173	47	2480957
2024	13.7	0.0	1.4	chr22	44975885	44976177	(5842291)	+	AluJb	SINE/Alu	1	289	(23)	2482976
20	9.8	0.0	0.0	chr22	45008890	45008922	(5809546)	+	(GTGAGT)n	Simple_repeat	1	33	(0)	2483034
570	23.0	2.0	4.5	chr22	45023692	45023846	(5794622)	C	MIRb	SINE/MIR	(38)	230	80	2483072
19	25.6	2.0	0.0	chr22	45553979	45554027	(5264441)	+	(GT)n	Simple_repeat	1	50	(0)	2484159
13	23.0	8.2	0.0	chr22	45554189	45554249	(5264219)	+	(AGCCTGC)n	Simple_repeat	1	66	(0)	2484160
12	18.3	0.0	3.0	chr22	46201902	46201934	(4616534)	+	(TTGTTT)n	Simple_repeat	1	33	(0)	2485180
12	10.0	0.0	0.0	chr22	46367900	46367921	(4450547)	+	(CTCC)n	Simple_repeat	1	22	(0)	2485430
245	30.7	8.0	1.6	chr22	46368202	46368330	(4450138)	+	MIR	SINE/MIR	56	193	(69)	2485431
619	18.9	3.0	0.0	chr22	49099363	49099489	(1718979)	+	MLT2C1	LTR/ERVL	75	205	(192)	2488986
649	25.5	6.7	3.7	chr22	49104346	49104561	(1713907)	C	L1MD2	LINE/L1	(2)	6357	6135	2488995
17	10.8	0.0	0.0	chr22	49209024	49209053	(1609415)	+	(CATT)n	Simple_repeat	1	30	(0)	2489109
13	12.3	0.0	9.3	chr22	49918445	49918487	(899981)	+	G-rich	Low_complexity	1	43	(0)	2489962
34	36.0	0.0	4.0	chr22	49970634	49970807	(847661)	+	(GT)n	Simple_repeat	1	174	(0)	2490008
135	36.6	0.0	0.6	chr22	49998456	49998981	(819487)	+	(GTGTGT)n	Simple_repeat	1	526	(0)	2490048
206	24.7	0.0	1.9	chr22	50271032	50271092	(547376)	+	L2b	LINE/L2	3125	3181	(194)	2490388
29	22.8	4.4	5.0	chr22	50481615	50481749	(336719)	+	(CGCCCG)n	Simple_repeat	1	141	(0)	2490731
21	26.5	1.1	4.5	chr22	50582371	50582458	(236010)	+	(CCCGG)n	Simple_repeat	1	89	(0)	2490903
13	20.2	4.3	2.0	chr22	50582505	50582551	(235917)	+	(CTGACCC)n	Simple_repeat	1	49	(0)	2490904
12	24.9	3.2	4.7	chr22	50582811	50582872	(235596)	+	(GCTCC)n	Simple_repeat	1	64	(0)	2490905
18	15.8	4.8	0.0	chr22	50583193	50583234	(235234)	+	(CGG)n	Simple_repeat	1	44	(0)	2490907
13	13.1	2.7	5.3	chr22	50600509	50600551	(217917)	+	(GCCC)n	Simple_repeat	1	41	(0)	2490937
37	0.0	2.5	2.4	chr22	50675374	50675413	(143055)	+	(TG)n	Simple_repeat	1	41	(0)	2491077
86	22.2	6.5	5.7	chr22	50675414	50675908	(142560)	+	(CAGTGTG)n	Simple_repeat	1	527	(0)	2491078
13	0.0	4.3	4.2	chr3	4467162	4467184	(193828375)	+	(CAG)n	Simple_repeat	1	24	(0)	2499047
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
20	11.6	0.0	0.0	chr3	8519742	8519770	(189775789)	+	(A)n	Simple_repeat	1	29	(0)	2505499
25	11.5	0.0	0.0	chr3	8519908	8519945	(189775614)	+	(GT)n	Simple_repeat	1	38	(0)	2505500
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
21	18.1	5.4	3.9	chr3	9552686	9552759	(188742800)	+	(CGG)n	Simple_repeat	1	78	(0)	2507426
581	29.3	0.0	0.1	chr3	9792008	9792154	(188503405)	+	MIRb	SINE/MIR	11	156	(106)	2507967
472	19.4	2.0	0.0	chr3	9792184	9792281	(188503278)	+	MIR	SINE/MIR	131	230	(32)	2507967
403	27.3	9.6	0.0	chr3	9914951	9915100	(188380459)	+	MER91A	DNA/hAT-Tip100	20	185	(11)	2508245
17	11.7	8.3	1.9	chr3	9915510	9915579	(188379980)	+	(CTGCTCG)n	Simple_repeat	1	74	(0)	2508246
24	16.8	4.3	2.7	chr3	9947192	9947261	(188348298)	+	(GCCAGCC)n	Simple_repeat	1	73	(0)	2508320
27	0.0	2.6	5.1	chr3	9952144	9952181	(188343378)	+	(CTC)n	Simple_repeat	1	39	(0)	2508332
424	23.6	0.0	0.0	chr3	9952563	9952651	(188342908)	C	L3	LINE/CR1	(66)	4033	3945	2508333
2420	6.9	0.7	0.3	chr3	9986936	9987241	(188308318)	+	AluY	SINE/Alu	3	309	(2)	2508419
16	18.9	0.0	0.0	chr3	10248010	10248039	(188047520)	+	(T)n	Simple_repeat	1	30	(0)	2509043
331	30.1	12.1	1.9	chr3	10248046	10248201	(188047358)	+	MIRb	SINE/MIR	60	233	(35)	2509044
12	21.5	7.1	1.7	chr3	10248718	10248773	(188046786)	+	(CGGCGCC)n	Simple_repeat	1	60	(0)	2509045
13	19.6	4.0	3.9	chr3	11719645	11719694	(186575865)	+	(AGGCC)n	Simple_repeat	1	52	(0)	2511933
307	26.3	10.8	0.0	chr3	12796307	12796405	(185499154)	C	MIRc	SINE/MIR	(127)	141	31	2514131
12	5.5	0.0	0.0	chr3	13141950	13141968	(185153591)	+	(GCA)n	Simple_repeat	1	19	(0)	2514715
218	34.9	2.0	2.7	chr3	13142195	13142344	(185153215)	C	MIR3	SINE/MIR	(13)	195	47	2514716
338	30.7	6.4	1.1	chr3	13162553	13162743	(185132816)	C	L1MC5a	LINE/L1	(1982)	795	594	2514748
466	28.8	14.2	1.7	chr3	13461224	13461520	(184834039)	C	MamGypLTR3a	LTR/Gypsy	(586)	395	62	2515296
363	26.0	8.0	5.9	chr3	13461708	13461928	(184833631)	+	MamGypLTR3a	LTR/Gypsy	652	877	(104)	2515297
623	26.4	11.5	0.4	chr3	13650226	13650472	(184645087)	C	L2c	LINE/L2	(79)	3308	3031	2515680
17	29.9	0.0	0.0	chr3	13650691	13650747	(184644812)	+	(GCGGT)n	Simple_repeat	1	57	(0)	2515681
14	15.4	6.7	2.1	chr3	13650739	13650783	(184644776)	+	(GGCCA)n	Simple_repeat	1	48	(0)	2515682
238	25.4	3.1	1.6	chr3	14124435	14124498	(184171061)	+	MIRc	SINE/MIR	88	152	(116)	2516338
13	8.1	3.6	3.5	chr3	14178454	14178481	(184117078)	+	(CCT)n	Simple_repeat	1	29	(0)	2516418
14	7.2	0.0	8.6	chr3	14402533	14402567	(183892992)	+	(CCCGG)n	Simple_repeat	1	35	(0)	2516883
193	24.4	0.0	0.0	chr3	15064900	15064944	(183230615)	+	MIRb	SINE/MIR	124	168	(100)	2518110
29	16.4	1.6	1.6	chr3	15332284	15332346	(182963213)	+	(TCC)n	Simple_repeat	1	64	(0)	2518597
13	11.9	0.0	6.2	chr3	15332634	15332665	(182962894)	+	(CCCGC)n	Simple_repeat	1	32	(0)	2518598
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
26049	4.0	0.2	0.1	chr3	18975950	18982086	(179313473)	+	L1PA3	LINE/L1	13	6155	(0)	2524066
27612	2.5	0.8	0.0	chr3	19097369	19103347	(179192212)	C	L1PA2	LINE/L1	(5)	6150	124	2524202
12	25.6	0.0	6.9	chr3	19146921	19146978	(179148581)	+	(CCGCC)n	Simple_repeat	1	58	(0)	2524271
15	31.8	0.0	2.7	chr3	23203579	23203651	(175091908)	+	(CGTGCCC)n	Simple_repeat	1	73	(0)	2529844
13	5.3	0.0	0.0	chr3	24495218	24495237	(173800322)	+	(GCG)n	Simple_repeat	1	20	(0)	2531966
16	15.2	6.5	2.0	chr3	24495301	24495346	(173800213)	+	(CCG)n	Simple_repeat	1	49	(0)	2531967
14	0.0	0.0	0.0	chr3	25664850	25664867	(172630692)	+	(GCC)n	Simple_repeat	1	18	(0)	2533626
15	16.3	2.9	0.0	chr3	25665280	25665314	(172630245)	+	G-rich	Low_complexity	1	36	(0)	2533627
2307	10.0	0.7	0.0	chr3	27485028	27485332	(170810227)	C	AluSx	SINE/Alu	(0)	312	1	2536147
41	9.3	0.0	0.0	chr3	31980806	31980863	(166314696)	+	(CA)n	Simple_repeat	1	58	(0)	2542974
13	17.6	5.0	0.0	chr3	31980864	31980894	(166314665)	+	(CGCG)n	Simple_repeat	1	33	(0)	2542975
12	21.3	4.4	2.1	chr3	31981009	31981053	(166314506)	+	(GCC)n	Simple_repeat	1	47	(0)	2542976
18	7.8	0.0	0.0	chr3	31981114	31981140	(166314419)	+	(GCT)n	Simple_repeat	1	27	(0)	2542977
12	13.7	0.0	0.0	chr3	31981233	31981256	(166314303)	+	(GCT)n	Simple_repeat	1	24	(0)	2542978
13	12.5	0.0	0.0	chr3	32570224	32570249	(165725310)	+	(GGCGG)n	Simple_repeat	1	26	(0)	2544138
16	11.2	0.0	0.0	chr3	32570308	32570336	(165725223)	+	(GGGGC)n	Simple_repeat	1	29	(0)	2544139
14	17.5	0.0	0.0	chr3	32570815	32570846	(165724713)	+	(GGCGGC)n	Simple_repeat	1	32	(0)	2544140
13	14.8	0.0	3.1	chr3	32570874	32570905	(165724654)	+	G-rich	Low_complexity	1	32	(0)	2544141
39	22.4	4.3	2.8	chr3	32781872	32782009	(165513550)	+	(TTATT)n	Simple_repeat	1	144	(0)	2544654
15	9.2	8.6	0.0	chr3	32816531	32816565	(165478994)	+	(CCCCT)n	Simple_repeat	1	38	(0)	2544750
17	14.2	0.0	0.0	chr3	32816652	32816682	(165478877)	+	(GAG)n	Simple_repeat	1	31	(0)	2544751
374	20.3	7.2	3.8	chr3	32836254	32836386	(165459173)	C	L1ME3G	LINE/L1	(715)	209	72	2544782
2506	6.6	0.3	0.0	chr3	32840965	32841266	(165454293)	+	AluY	SINE/Alu	1	303	(8)	2544790
517	20.0	5.2	0.0	chr3	32841287	32841396	(165454163)	+	L1MD1	LINE/L1	6060	6175	(67)	2544791
1012	9.8	4.1	1.4	chr3	32841406	32841548	(165454011)	+	AluJb	SINE/Alu	11	157	(155)	2544792
13	25.0	2.7	5.3	chr3	33097152	33097224	(165198335)	+	(CCCGCGC)n	Simple_repeat	1	75	(0)	2545277
26	14.1	2.9	4.3	chr3	33114562	33114629	(165180930)	+	(GCCCCG)n	Simple_repeat	1	70	(0)	2545325
26	24.9	1.2	2.4	chr3	33440394	33440477	(164855082)	+	(CGCCC)n	Simple_repeat	1	85	(0)	2545867
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
701	31.0	5.3	0.9	chr3	36379701	36379915	(161915644)	+	MIRb	SINE/MIR	19	243	(25)	2549819
186	32.3	9.9	8.6	chr3	36379967	36380105	(161915454)	+	MIR3	SINE/MIR	12	152	(56)	2549820
15	14.8	2.6	2.5	chr3	36380394	36380432	(161915127)	+	(GGCGG)n	Simple_repeat	1	40	(0)	2549821
12	16.9	8.3	1.9	chr3	36380462	36380509	(161915050)	+	G-rich	Low_complexity	1	52	(0)	2549822
280	26.8	7.6	0.0	chr3	38039699	38039795	(160255764)	C	L2a	LINE/L2	(27)	3399	3295	2552430
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
13	11.0	0.0	6.1	chr3	38455466	38455498	(159840061)	+	G-rich	Low_complexity	1	33	(0)	2553074
54	0.0	0.0	0.0	chr3	39126476	39126521	(159169038)	+	(AC)n	Simple_repeat	1	46	(0)	2554011
15	5.6	0.0	0.0	chr3	39126541	39126559	(159169000)	+	(AC)n	Simple_repeat	1	19	(0)	2554011
17	0.0	0.0	0.0	chr3	39126584	39126602	(159168957)	+	(AC)n	Simple_repeat	1	19	(0)	2554011
31	18.6	0.0	0.0	chr3	39126627	39126683	(159168876)	+	(AC)n	Simple_repeat	1	57	(0)	2554011
24	17.1	2.2	0.0	chr3	40328358	40328403	(157967156)	+	(AC)n	Simple_repeat	1	47	(0)	2555760
659	24.2	3.1	1.9	chr3	40328457	40328616	(157966943)	C	MER5A1	DNA/hAT-Charlie	(1)	165	4	2555761
15	21.4	1.9	3.8	chr3	42300039	42300090	(155995469)	+	(TCTGAC)n	Simple_repeat	1	53	(0)	2558861
733	26.6	8.4	2.9	chr3	42300298	42300435	(155995124)	+	LTR16E1	LTR/ERVL	243	398	(140)	2558862
1535	12.7	22.6	3.1	chr3	42300436	42300761	(155994798)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2558863
13	25.5	0.0	0.0	chr3	43690981	43691017	(154604542)	+	(GCG)n	Simple_repeat	1	37	(0)	2560995
20	32.8	2.8	0.0	chr3	43894415	43894486	(154401073)	+	(GC)n	Simple_repeat	1	74	(0)	2561332
263	29.0	16.9	0.0	chr3	44729869	44730030	(153565529)	+	MIRc	SINE/MIR	24	218	(50)	2562571
267	30.1	6.8	4.9	chr3	44976652	44976794	(153318765)	+	MIRc	SINE/MIR	112	257	(11)	2562983
16	19.2	2.0	3.9	chr3	45146457	45146507	(153149052)	+	(CCTCCT)n	Simple_repeat	1	52	(0)	2563314
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
489	21.8	4.7	2.1	chr3	46488743	46488887	(151806672)	+	LTR41B	LTR/ERVL	19	167	(591)	2565464
377	26.0	16.2	1.0	chr3	46489221	46489418	(151806141)	+	LTR41B	LTR/ERVL	444	677	(81)	2565464
100	13.9	3.6	1.0	chr3	46629633	46629828	(151665731)	+	GA-rich	Low_complexity	1	203	(0)	2565708
378	27.4	11.7	3.7	chr3	46629879	46630151	(151665408)	C	LTR33A	LTR/ERVL	(77)	443	146	2565709
248	26.4	5.2	1.1	chr3	46811614	46811705	(151483854)	C	MIRb	SINE/MIR	(116)	152	57	2565966
14	23.0	1.8	5.3	chr3	46979798	46979853	(151315706)	+	(CGG)n	Simple_repeat	1	57	(0)	2566214
14	7.8	0.0	6.5	chr3	46979838	46979868	(151315691)	+	(GCCGG)n	Simple_repeat	1	31	(0)	2566215
12	24.1	0.0	0.0	chr3	46982086	46982119	(151313440)	+	(GCCT)n	Simple_repeat	1	34	(0)	2566219
199	34.5	1.0	3.5	chr3	46982541	46982657	(151312902)	+	L2b	LINE/L2	3276	3387	(0)	2566220
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
49	10.7	0.0	0.0	chr3	48087706	48087778	(150207781)	+	(CA)n	Simple_repeat	1	73	(0)	2568627
11	27.4	2.0	2.0	chr3	48088856	48088905	(150206654)	+	(GGAGCCG)n	Simple_repeat	1	51	(0)	2568628
13	21.1	2.6	0.0	chr3	48089099	48089136	(150206423)	+	(TGCGGCC)n	Simple_repeat	1	39	(0)	2568629
13	19.8	0.0	6.5	chr3	48990529	48990574	(149304985)	+	(CGAGCC)n	Simple_repeat	1	46	(0)	2570444
13	7.0	6.2	2.9	chr3	49018144	49018175	(149277384)	+	(GCGAG)n	Simple_repeat	1	34	(0)	2570480
17	8.3	7.9	0.0	chr3	49120805	49120842	(149174717)	+	(TCCGGT)n	Simple_repeat	1	41	(0)	2570688
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
16	0.0	0.0	0.0	chr3	49358241	49358260	(148937299)	+	(GCC)n	Simple_repeat	1	20	(0)	2571164
47	2.2	0.0	0.0	chr3	49673796	49673842	(148621717)	+	(CTCACG)n	Simple_repeat	1	47	(0)	2571786
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
17	6.3	2.7	5.3	chr3	49724202	49724238	(148571321)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	2571830
13	28.0	0.0	0.0	chr3	49940171	49940213	(148355346)	+	(CGGAGG)n	Simple_repeat	1	43	(0)	2572263
259	26.4	13.4	1.8	chr3	50275128	50275243	(148020316)	+	MIRc	SINE/MIR	38	165	(103)	2572849
12	23.5	5.1	3.2	chr3	50321388	50321464	(147974095)	+	(CCAGC)n	Simple_repeat	1	78	(0)	2572910
14	11.0	0.0	5.9	chr3	50337380	50337417	(147958142)	+	(GCGTGC)n	Simple_repeat	1	35	(0)	2572924
190	33.5	8.7	4.8	chr3	50405681	50405846	(147889713)	C	MIRc	SINE/MIR	(76)	192	20	2572996
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
24	24.2	3.6	2.4	chr3	51706982	51707105	(146588454)	+	G-rich	Low_complexity	1	125	(0)	2574851
14	20.9	5.1	3.2	chr3	51955866	51955924	(146339635)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2575221
487	8.3	0.0	0.0	chr3	52006578	52006637	(146288922)	+	AluSx4	SINE/Alu	159	218	(92)	2575297
15	23.3	3.5	6.7	chr3	52278686	52278771	(146016788)	+	G-rich	Low_complexity	1	89	(0)	2575687
17	20.8	4.0	0.0	chr3	52685591	52685640	(145609919)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2576289
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
14	19.2	3.9	3.8	chr3	52705593	52705643	(145589916)	+	(GCCCC)n	Simple_repeat	1	53	(0)	2576322
2208	11.3	0.0	0.7	chr3	53252842	53253141	(145042418)	C	AluSq2	SINE/Alu	(15)	298	1	2577290
338	31.2	8.6	1.8	chr3	53255289	53255451	(145040108)	+	MIR	SINE/MIR	13	187	(75)	2577296
356	25.3	15.5	3.9	chr3	53748545	53748725	(144546834)	+	MIRc	SINE/MIR	20	225	(43)	2578040
180	33.0	13.9	2.2	chr3	53846820	53847002	(144448557)	+	MIRb	SINE/MIR	31	238	(30)	2578144
16	12.9	4.3	4.2	chr3	54121890	54121935	(144173624)	+	(GCCCCA)n	Simple_repeat	1	48	(0)	2578600
48	2.1	0.0	0.0	chr3	54188229	54188276	(144107283)	+	(AAAC)n	Simple_repeat	1	48	(0)	2578705
205	14.1	4.6	0.2	chr3	54717505	54717898	(143577661)	+	(TG)n	Simple_repeat	1	412	(0)	2579450
7918	24.6	8.2	3.1	chr3	54718007	54720833	(143574726)	C	L1ME3	LINE/L1	(759)	5387	2402	2579449
18	34.2	0.0	1.5	chr3	55482883	55482948	(142812611)	+	(CA)n	Simple_repeat	1	66	(0)	2580511
28	24.1	0.0	0.0	chr3	55485487	55485549	(142810010)	+	(AC)n	Simple_repeat	1	63	(0)	2580515
75	1.5	0.0	0.0	chr3	56556843	56556910	(141738649)	+	(GT)n	Simple_repeat	1	68	(0)	2582352
490	23.6	15.1	0.7	chr3	57555575	57555742	(140739817)	+	MIRb	SINE/MIR	58	255	(13)	2584171
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
305	31.3	11.6	5.1	chr3	58021654	58021766	(140273793)	+	L2b	LINE/L2	3078	3201	(174)	2585209
1960	15.4	1.3	0.7	chr3	58021767	58022072	(140273487)	C	AluJo	SINE/Alu	(4)	308	1	2585210
486	26.1	12.4	3.5	chr3	58587856	58588039	(139707520)	C	MIR	SINE/MIR	(52)	210	3	2586306
427	25.2	2.9	0.0	chr3	58588047	58588145	(139707414)	C	MIRb	SINE/MIR	(69)	199	98	2586307
16	0.0	0.0	0.0	chr3	62873618	62873634	(135421925)	+	(T)n	Simple_repeat	1	17	(0)	2593025
21400	12.7	4.5	1.6	chr3	63011525	63016275	(135279284)	C	L1PA8A	LINE/L1	(1450)	5011	19	2593290
294	36.6	5.3	0.7	chr3	64218651	64218793	(134076766)	C	MIRc	SINE/MIR	(107)	161	12	2595336
338	14.1	30.3	0.0	chr3	64218817	64218908	(134076651)	+	MER5A1	DNA/hAT-Charlie	31	162	(4)	2595337
324	23.2	2.0	9.2	chr3	65483266	65483374	(132812185)	+	MER102b	DNA/hAT-Charlie	238	338	(3)	2597483
343	24.1	1.2	0.0	chr3	66036214	66036296	(132259263)	C	MIR	SINE/MIR	(3)	259	176	2598515
202	32.9	11.2	1.8	chr3	66036377	66036546	(132259013)	C	L2b	LINE/L2	(65)	3322	3132	2598516
641	27.4	3.8	3.8	chr3	66037088	66037296	(132258263)	+	MIRb	SINE/MIR	57	265	(3)	2598517
57	0.0	0.0	0.0	chr3	66408914	66408962	(131886597)	+	(GT)n	Simple_repeat	1	49	(0)	2599178
16	12.8	4.1	5.9	chr3	66408965	66409013	(131886546)	+	GA-rich	Low_complexity	1	51	(0)	2599179
33	2.9	0.0	0.0	chr3	66442441	66442475	(131853084)	+	(GAG)n	Simple_repeat	1	35	(0)	2599221
488	31.2	5.7	2.5	chr3	67114434	67114670	(131180889)	+	MIR	SINE/MIR	1	245	(17)	2600363
709	33.7	1.8	2.1	chr3	71152592	71152913	(127142646)	+	MIRb	SINE/MIR	2	268	(0)	2606784
30	19.1	0.0	0.0	chr3	71583424	71583478	(126712081)	+	(T)n	Simple_repeat	1	55	(0)	2607453
13	22.1	0.0	0.0	chr3	71583468	71583499	(126712060)	+	(TTG)n	Simple_repeat	1	32	(0)	2607454
24	31.4	3.9	0.0	chr3	71583622	71583723	(126711836)	+	(CG)n	Simple_repeat	1	106	(0)	2607455
21	22.8	1.8	0.0	chr3	71583800	71583855	(126711704)	+	(GCG)n	Simple_repeat	1	57	(0)	2607456
2391	20.0	2.8	0.2	chr3	86174931	86175412	(112120147)	+	LTR42	LTR/ERVL	1	495	(0)	2627948
19	26.4	4.1	4.5	chr3	87792497	87792618	(110502941)	+	GA-rich	Low_complexity	1	121	(0)	2629960
196	29.7	13.9	0.9	chr3	101573623	101573734	(96721825)	+	MIRb	SINE/MIR	85	213	(55)	2643207
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
20	28.7	2.8	0.0	chr3	105366924	105366995	(92928564)	+	(CCG)n	Simple_repeat	1	74	(0)	2648181
3266	15.8	1.1	2.8	chr3	106912993	106913557	(91382002)	+	LTR2752	LTR/ERV1	257	811	(452)	2650131
2930	20.4	3.8	0.0	chr3	106913552	106914160	(91381399)	C	MLT-int	LTR/ERVL-MaLR	(933)	802	170	2650132
626	27.3	6.7	3.5	chr3	110577121	110577378	(87718181)	+	LTR16E2	LTR/ERVL	300	566	(2)	2655429
36	25.1	2.9	0.9	chr3	113211709	113211813	(85083746)	+	(CA)n	Simple_repeat	1	108	(0)	2658908
184	39.0	5.5	5.0	chr3	116390354	116390572	(81904987)	C	L2c	LINE/L2	(227)	3160	2941	2663445
1212	10.9	0.6	6.0	chr3	116390580	116390763	(81904796)	+	AluSc8	SINE/Alu	132	305	(6)	2663446
48	0.0	0.0	0.0	chr3	117996823	117996863	(80298696)	+	(AC)n	Simple_repeat	1	41	(0)	2665657
49	0.0	0.0	0.0	chr3	117996907	117996948	(80298611)	+	(CA)n	Simple_repeat	1	42	(0)	2665658
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
202	34.2	0.0	11.2	chr3	119241221	119241345	(79054214)	+	MIR	SINE/MIR	84	194	(68)	2667270
585	23.8	1.2	4.7	chr3	119361175	119361346	(78934213)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	2667450
2244	10.5	0.0	2.0	chr3	119361375	119361680	(78933879)	C	AluSx1	SINE/Alu	(11)	301	2	2667451
23	27.1	0.0	0.0	chr3	119463509	119463574	(78831985)	+	(GCCAGA)n	Simple_repeat	1	66	(0)	2667614
225	29.5	12.3	2.1	chr3	119463821	119464016	(78831543)	C	MIRc	SINE/MIR	(23)	245	19	2667615
8665	4.8	0.5	0.5	chr3	120676860	120677930	(77617629)	+	MER11C	LTR/ERVK	1	1071	(0)	2669519
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
2074	13.5	0.7	0.7	chr3	121593871	121594167	(76701392)	C	AluSz	SINE/Alu	(15)	297	1	2670715
13	18.2	0.0	0.0	chr3	122795234	122795264	(75500295)	+	G-rich	Low_complexity	1	31	(0)	2672621
15	17.6	0.0	0.0	chr3	122795282	122795313	(75500246)	+	(GGC)n	Simple_repeat	1	32	(0)	2672622
14	10.3	2.9	5.6	chr3	122795341	122795375	(75500184)	+	(GCT)n	Simple_repeat	1	36	(0)	2672623
40	0.0	2.6	0.0	chr3	122986594	122986631	(75308928)	+	(TG)n	Simple_repeat	1	39	(0)	2672927
24	14.7	0.0	0.0	chr3	122986687	122986731	(75308828)	+	(ACACAC)n	Simple_repeat	1	45	(0)	2672928
432	25.3	13.8	3.0	chr3	123066692	123066858	(75228701)	+	MIRb	SINE/MIR	67	254	(14)	2673093
712	26.5	5.8	1.7	chr3	124774805	124775040	(73520519)	C	MIR	SINE/MIR	(6)	256	2	2675843
192	26.0	1.3	10.5	chr3	124775579	124775664	(73519895)	C	Tigger19a	DNA/TcMar-Tigger	(125)	198	121	2675837
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
249	35.6	2.5	0.9	chr3	126389754	126389869	(71905690)	C	L2c	LINE/L2	(0)	3387	3270	2678508
699	24.1	7.0	0.6	chr3	126394364	126394538	(71901021)	C	MER5A	DNA/hAT-Charlie	(0)	189	3	2678519
258	36.3	3.5	9.5	chr3	126703553	126703890	(71591669)	+	L2b	LINE/L2	3058	3374	(1)	2678968
280	31.6	5.4	6.6	chr3	127457412	127457740	(70837819)	+	L1ME3G	LINE/L1	530	806	(118)	2680069
637	32.2	8.7	5.7	chr3	127458434	127458769	(70836790)	+	L2c	LINE/L2	3036	3382	(5)	2680072
267	16.8	0.5	0.0	chr3	127548260	127548315	(70747244)	+	MIRb	SINE/MIR	113	170	(98)	2680228
2115	12.2	0.0	3.4	chr3	127548464	127548783	(70746776)	+	AluJb	SINE/Alu	1	309	(3)	2680229
24	14.0	5.5	0.0	chr3	127629607	127629661	(70665898)	+	(CGTGTG)n	Simple_repeat	1	58	(0)	2680398
2506	8.1	13.9	22.3	chr3	128152657	128153231	(70142328)	C	LTR12F	LTR/ERV1	(0)	519	1	2681287
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
2264	5.9	0.4	1.1	chr3	128651030	128651338	(69644221)	C	AluYc	SINE/Alu	(0)	299	1	2682134
194	23.9	4.2	0.0	chr3	128993480	128993525	(69302034)	+	L2b	LINE/L2	3328	3375	(0)	2682835
190	30.8	14.7	5.0	chr3	129026766	129026905	(69268654)	C	L3	LINE/CR1	(601)	3498	3343	2682900
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
344	27.7	11.2	2.5	chr3	129439637	129439758	(68855801)	C	MIR3	SINE/MIR	(19)	189	56	2683753
12	18.8	2.6	2.6	chr3	131527017	131527054	(66768505)	+	(CCCTGG)n	Simple_repeat	1	39	(0)	2687029
23	26.9	1.2	2.5	chr3	132034898	132034977	(66260582)	+	GA-rich	Low_complexity	1	81	(0)	2687845
11	27.7	0.0	0.0	chr3	132660552	132660590	(65634969)	+	(GGAGCG)n	Simple_repeat	1	39	(0)	2688747
795	18.4	0.0	2.5	chr3	133037914	133038075	(65257484)	+	MER5A1	DNA/hAT-Charlie	4	161	(5)	2689334
18	29.3	1.7	0.0	chr3	133038328	133038385	(65257174)	+	(GC)n	Simple_repeat	1	59	(0)	2689335
41	13.0	0.0	0.0	chr3	134029474	134029549	(64266010)	+	(AC)n	Simple_repeat	1	76	(0)	2690821
181	32.8	0.0	3.0	chr3	134375136	134375201	(63920358)	+	L3b	LINE/CR1	4138	4201	(1031)	2691352
454	30.6	7.9	1.9	chr3	134375239	134375451	(63920108)	C	MIRb	SINE/MIR	(1)	267	41	2691353
17	31.2	0.0	0.0	chr3	134795323	134795373	(63500186)	+	(CT)n	Simple_repeat	1	51	(0)	2691963
33	29.1	1.0	0.0	chr3	134795373	134795487	(63500072)	+	(CA)n	Simple_repeat	1	116	(0)	2691964
17	31.1	0.0	0.0	chr3	134795374	134795381	(63500178)	+	(CGCTCT)n	Simple_repeat	5	63	(0)	2691965
11	22.5	2.2	4.3	chr3	136195597	136195642	(62099917)	+	(GGCGGC)n	Simple_repeat	1	47	(0)	2693943
16	3.7	7.1	0.0	chr3	137771178	137771205	(60524354)	+	(AGGG)n	Simple_repeat	1	30	(0)	2696492
12	8.1	3.6	3.5	chr3	137771419	137771446	(60524113)	+	G-rich	Low_complexity	1	29	(0)	2696493
14	8.5	0.0	3.7	chr3	138187608	138187634	(60107925)	+	(CCCG)n	Simple_repeat	1	27	(0)	2697136
14	5.0	0.0	0.0	chr3	138435673	138435693	(59859866)	+	(CCTC)n	Simple_repeat	1	21	(0)	2697544
14	20.0	0.0	6.5	chr3	138945502	138945547	(59350012)	+	(GGC)n	Simple_repeat	1	46	(0)	2698569
39	23.6	4.6	4.4	chr3	138945713	138945726	(59349833)	+	(GGC)n	Simple_repeat	1	18	(163)	2698570
13	15.8	2.7	2.6	chr3	138945727	138945763	(59349796)	+	G-rich	Low_complexity	1	38	(0)	2698571
39	23.6	4.6	4.4	chr3	138945764	138945885	(59349674)	+	(GGC)n	Simple_repeat	19	181	(0)	2698570
581	27.9	7.3	6.6	chr3	140941197	140941468	(57354091)	C	L1ME3G	LINE/L1	(291)	633	360	2701539
12	21.0	3.6	5.3	chr3	141231886	141231940	(57063619)	+	G-rich	Low_complexity	1	57	(0)	2701980
35	15.0	4.2	4.0	chr3	141486916	141487011	(56808548)	+	G-rich	Low_complexity	1	100	(0)	2702372
2587	13.4	3.1	4.9	chr3	141684589	141685041	(56610518)	+	MER65A	LTR/ERV1	1	445	(0)	2702687
12	26.6	2.0	1.9	chr3	142224839	142224889	(56070670)	+	A-rich	Low_complexity	1	52	(0)	2703767
913	19.8	3.7	3.2	chr3	142595960	142596147	(55699412)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2704383
12	31.9	3.2	0.0	chr3	142596364	142596425	(55699134)	+	G-rich	Low_complexity	1	64	(0)	2704384
11	20.2	3.5	6.7	chr3	142964026	142964083	(55331476)	+	G-rich	Low_complexity	1	60	(0)	2704983
37	0.0	2.5	2.4	chr3	142964228	142964267	(55331292)	+	(GT)n	Simple_repeat	1	41	(0)	2704984
12	6.9	5.9	5.6	chr3	146544852	146544885	(51750674)	+	(GGAACT)n	Simple_repeat	1	36	(0)	2709708
17	6.9	3.0	2.9	chr3	147397079	147397111	(50898448)	+	(TTCT)n	Simple_repeat	1	34	(0)	2710727
17	10.7	3.1	3.0	chr3	147397327	147397358	(50898201)	+	(TC)n	Simple_repeat	1	33	(0)	2710728
15	20.2	4.8	4.6	chr3	148991651	148991712	(49303847)	+	(CCG)n	Simple_repeat	1	65	(0)	2712870
4973	21.1	8.9	3.9	chr3	149195922	149196808	(49098751)	+	L1MC5	LINE/L1	7476	8406	(898)	2713199
3450	5.8	0.0	0.7	chr3	149196809	149197259	(49098300)	+	LTR7	LTR/ERV1	1	448	(2)	2713201
1905	15.5	0.6	7.2	chr3	149197600	149197961	(49097598)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	2713202
4973	21.1	8.9	3.9	chr3	149197962	149198287	(49097272)	+	L1MC5	LINE/L1	8745	9117	(187)	2713199
36	16.3	3.1	4.0	chr3	149970880	149970975	(48324584)	+	(GCG)n	Simple_repeat	1	99	(0)	2714495
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
48	0.0	0.0	0.0	chr3	150221751	150221791	(48073768)	+	(GT)n	Simple_repeat	1	41	(0)	2714896
15	24.3	0.0	0.0	chr3	150222097	150222130	(48073429)	+	(TG)n	Simple_repeat	1	34	(0)	2714897
33	5.7	5.3	1.7	chr3	150222136	150222192	(48073367)	+	(GT)n	Simple_repeat	1	60	(0)	2714898
257	34.4	2.0	0.0	chr3	150222278	150222373	(48073186)	C	L2c	LINE/L2	(0)	3387	3290	2714899
611	29.8	2.4	2.8	chr3	150222418	150222628	(48072931)	+	MIRc	SINE/MIR	20	229	(39)	2714900
14	27.2	1.6	3.2	chr3	150408713	150408773	(47886786)	+	(CCGC)n	Simple_repeat	1	62	(0)	2715187
18	23.7	0.0	2.0	chr3	150408885	150408940	(47886619)	+	(CCT)n	Simple_repeat	1	54	(0)	2715188
14	22.2	6.1	2.9	chr3	150408941	150408948	(47886611)	+	(CACCGC)n	Simple_repeat	3	70	(0)	2715189
15	17.7	0.0	0.0	chr3	150546396	150546427	(47749132)	+	(CGC)n	Simple_repeat	1	32	(0)	2715401
2847	7.1	8.9	0.5	chr3	152602744	152603153	(45692406)	+	LTR7	LTR/ERV1	1	448	(2)	2718406
2474	7.2	0.3	0.0	chr3	152603320	152603612	(45691947)	C	AluYm1	SINE/Alu	(17)	294	1	2718407
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
15	15.9	2.9	0.0	chr3	154121389	154121423	(44174136)	+	(CGGCGC)n	Simple_repeat	1	36	(0)	2720752
13	0.0	0.0	0.0	chr3	154122402	154122418	(44173141)	+	(CGC)n	Simple_repeat	1	17	(0)	2720753
22	7.7	2.2	4.3	chr3	156674852	156674896	(41620663)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	2724395
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
443	29.6	3.6	1.2	chr3	157089356	157089516	(41206043)	C	MIR3	SINE/MIR	(5)	203	39	2724955
18	7.6	0.0	0.0	chr3	157159984	157160011	(41135548)	+	(CGT)n	Simple_repeat	1	28	(0)	2725060
3714	17.3	5.5	0.5	chr3	157347476	157348212	(40947347)	+	L1M2c	LINE/L1	14	789	(6000)	2725370
16	13.2	0.0	0.0	chr3	157499245	157499269	(40796290)	+	(T)n	Simple_repeat	1	25	(0)	2725589
15	26.4	0.0	0.0	chr3	158098206	158098250	(40197309)	+	G-rich	Low_complexity	1	45	(0)	2726357
12411	15.3	1.7	2.5	chr3	160885420	160887573	(37407986)	+	L1PA7	LINE/L1	3	2151	(4332)	2730519
37	0.0	0.0	0.0	chr3	168096250	168096281	(30199278)	+	(GT)n	Simple_repeat	1	32	(0)	2739595
286	40.7	7.0	3.4	chr3	168272159	168272542	(30023017)	C	L2b	LINE/L2	(6)	3369	2971	2739828
232	34.1	11.3	8.3	chr3	168272786	168273125	(30022434)	C	L2b	LINE/L2	(801)	2618	2243	2739828
35	11.8	1.8	0.0	chr3	169147711	169147766	(29147793)	+	(GT)n	Simple_repeat	1	57	(0)	2740986
15	20.6	3.9	1.9	chr3	169147844	169147895	(29147664)	+	G-rich	Low_complexity	1	54	(0)	2740987
25	19.9	0.0	0.0	chr3	169659073	169659119	(28636440)	+	A-rich	Low_complexity	1	47	(0)	2741625
15	17.6	0.0	0.0	chr3	169659246	169659277	(28636282)	+	(CACA)n	Simple_repeat	1	32	(0)	2741626
18	13.3	4.9	0.0	chr3	169659278	169659285	(28636274)	+	(TCACAC)n	Simple_repeat	2	43	(0)	2741627
35	0.0	0.0	0.0	chr3	169659441	169659473	(28636086)	+	(T)n	Simple_repeat	1	33	(0)	2741628
28	8.3	0.0	0.0	chr3	171459216	171459253	(26836306)	+	(AC)n	Simple_repeat	1	38	(0)	2744556
37	2.9	0.0	0.0	chr3	171459676	171459711	(26835848)	+	(AC)n	Simple_repeat	1	36	(0)	2744557
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
18	17.9	1.5	7.5	chr3	172448559	172448624	(25846935)	+	GA-rich	Low_complexity	1	67	(0)	2746086
216	29.0	1.4	1.4	chr3	172449507	172449576	(25845983)	+	MIRc	SINE/MIR	70	139	(129)	2746088
39716	6.7	2.2	3.2	chr3	175827937	175835771	(22459788)	+	HERVH-int	LTR/ERV1	1	7713	(0)	2750920
3569	4.9	0.0	0.4	chr3	175835772	175836221	(22459338)	+	LTR7	LTR/ERV1	1	448	(2)	2750920
2524	21.3	2.8	8.7	chr3	178684846	178684932	(19610627)	+	L1MA8	LINE/L1	6190	6264	(27)	2755050
200	22.6	0.0	10.2	chr3	178685173	178685231	(19610328)	+	MIRb	SINE/MIR	29	81	(187)	2755052
187	13.2	2.6	5.0	chr3	178685260	178685299	(19610260)	+	MER5B	DNA/hAT-Charlie	100	138	(40)	2755053
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
2248	9.4	0.0	1.9	chr3	179653926	179654232	(18641327)	+	AluSx1	SINE/Alu	1	301	(11)	2756627
21	12.2	2.0	4.0	chr3	180912587	180912635	(17382924)	+	(CCCCTCC)n	Simple_repeat	1	50	(0)	2758546
16	0.0	0.0	0.0	chr3	181722128	181722144	(16573415)	+	(T)n	Simple_repeat	1	17	(0)	2759759
15	0.0	0.0	0.0	chr3	181722173	181722189	(16573370)	+	(TG)n	Simple_repeat	1	17	(0)	2759760
13	25.1	2.0	2.0	chr3	183884546	183884594	(14410965)	+	GA-rich	Low_complexity	1	50	(0)	2763582
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
216	32.5	10.9	2.4	chr3	183885151	183885317	(14410242)	C	MIRb	SINE/MIR	(41)	227	45	2763584
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
312	22.6	13.9	4.1	chr3	184526315	184526411	(13769148)	C	MER5A1	DNA/hAT-Charlie	(23)	143	36	2764820
508	32.2	11.1	2.8	chr3	184560544	184561297	(13734262)	+	L2a	LINE/L2	2534	3424	(2)	2764910
16	26.2	4.1	2.6	chr3	184659073	184659145	(13636414)	+	GA-rich	Low_complexity	1	76	(0)	2765077
49	0.0	0.0	0.0	chr3	184659147	184659188	(13636371)	+	(GT)n	Simple_repeat	1	42	(0)	2765078
16	9.4	10.6	1.9	chr3	186783214	186783260	(11512299)	+	(CTCCGG)n	Simple_repeat	1	52	(0)	2768981
266	21.5	14.2	4.0	chr3	186807356	186807481	(11488078)	C	L2a	LINE/L2	(1)	3425	3285	2769013
12	10.6	2.9	5.7	chr3	186826645	186826678	(11468881)	+	(TTTC)n	Simple_repeat	1	35	(0)	2769053
13	27.5	1.3	6.6	chr3	186826666	186826740	(11468819)	+	(TCC)n	Simple_repeat	1	76	(0)	2769054
16	6.8	6.5	0.0	chr3	187139537	187139578	(11155981)	+	(GGCCCC)n	Simple_repeat	1	44	(0)	2769652
26483	2.4	0.0	0.1	chr3	187862481	187868516	(10427043)	+	L1PA2	LINE/L1	124	6155	(0)	2770863
12	22.8	4.2	2.0	chr3	192514890	192514937	(5780622)	+	(GGCGCG)n	Simple_repeat	1	50	(0)	2778041
455	21.4	1.1	0.0	chr3	193657631	193657719	(4637840)	C	MIRb	SINE/MIR	(8)	260	171	2779815
2476	8.4	0.3	0.3	chr3	193657964	193658273	(4637286)	+	AluSp	SINE/Alu	1	310	(3)	2779816
477	35.8	1.1	0.5	chr3	193788551	193788738	(4506821)	C	MIR3	SINE/MIR	(11)	197	9	2779996
512	33.6	5.7	3.1	chr3	193812573	193812796	(4482763)	+	MIRb	SINE/MIR	10	239	(29)	2780043
18	10.7	3.3	0.0	chr3	194134845	194134874	(4160685)	+	(AC)n	Simple_repeat	1	31	(0)	2780602
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
19	21.1	3.5	6.7	chr3	194137861	194137947	(4157612)	+	(GCC)n	Simple_repeat	1	90	(0)	2780607
610	28.2	13.2	1.8	chr3	194333041	194333440	(3962119)	C	MER20B	DNA/hAT-Charlie	(10)	773	321	2780947
16	23.6	4.4	2.8	chr3	194486657	194486724	(3808835)	+	(CGCCGC)n	Simple_repeat	1	71	(0)	2781195
14	18.3	2.7	0.0	chr3	194486839	194486875	(3808684)	+	G-rich	Low_complexity	1	38	(0)	2781196
16	29.3	1.6	1.5	chr3	194687612	194687675	(3607884)	+	GA-rich	Low_complexity	1	65	(0)	2781658
13	13.1	5.6	9.3	chr3	195270948	195271018	(3024541)	+	(GGCCAGC)n	Simple_repeat	1	75	(0)	2782627
2299	7.5	1.7	0.0	chr3	195747584	195747878	(2547681)	+	AluSz	SINE/Alu	1	300	(12)	2783589
26	3.2	0.0	2.9	chr3	195747963	195747996	(2547563)	+	(CCCCG)n	Simple_repeat	1	34	(0)	2783590
14	7.7	3.3	3.2	chr3	195748011	195748040	(2547519)	+	(GCCCC)n	Simple_repeat	1	31	(0)	2783591
1311	26.4	8.0	1.9	chr3	196665885	196666367	(1629192)	+	LTR33	LTR/ERVL	1	515	(0)	2785503
420	29.4	2.6	2.6	chr4	213119	213310	(190001245)	C	MER57E3	LTR/ERV1	(0)	487	296	2788777
43	30.8	0.8	0.0	chr4	337403	337532	(189877023)	+	(TG)n	Simple_repeat	1	131	(0)	2788954
14	21.8	5.3	5.0	chr4	932006	932081	(189282474)	+	(CCGCAG)n	Simple_repeat	1	80	(0)	2789688
13	19.6	0.0	6.5	chr4	1248144	1248189	(188966366)	+	(GCCCGC)n	Simple_repeat	1	46	(0)	2790020
285	30.2	6.1	0.0	chr4	1792841	1792979	(188421576)	+	L2c	LINE/L2	3058	3205	(182)	2790606
559	17.3	16.1	1.3	chr4	1870269	1870426	(188344129)	+	MER67A	LTR/ERV1	3	188	(355)	2790724
1891	8.0	0.0	1.6	chr4	2467906	2468154	(187746401)	+	AluSx1	SINE/Alu	1	245	(67)	2791605
24	25.1	4.9	1.9	chr4	2792973	2793074	(187421481)	+	G-rich	Low_complexity	1	107	(0)	2792250
13022	9.1	0.6	1.6	chr4	2921428	2923602	(187290953)	C	L1PA7	LINE/L1	(4310)	2189	1	2792449
219	34.2	0.7	0.7	chr4	3362337	3363185	(186851370)	+	(GT)n	Simple_repeat	1	855	(0)	2793106
193	27.4	5.8	3.4	chr4	3791967	3792083	(186422472)	C	L2	LINE/L2	(870)	2549	2430	2793620
254	32.8	9.2	1.5	chr4	3835848	3835977	(186378578)	+	MIR	SINE/MIR	13	153	(109)	2793689
281	32.3	1.0	3.9	chr4	3836035	3836137	(186378418)	C	MIR	SINE/MIR	(64)	204	98	2793690
22	23.9	7.6	2.4	chr4	3871844	3871961	(186342594)	+	(GGCGAG)n	Simple_repeat	1	127	(0)	2793743
221	22.6	3.1	4.6	chr4	3872129	3872193	(186342362)	C	MIR	SINE/MIR	(109)	153	90	2793744
211	25.6	7.2	6.2	chr4	4575764	4575859	(185638696)	C	MIR	SINE/MIR	(33)	229	133	2794977
52	2.1	0.0	0.0	chr4	5891165	5891213	(184323342)	+	(CA)n	Simple_repeat	1	49	(0)	2797368
212	26.5	0.0	0.0	chr4	6105348	6105396	(184109159)	+	L2a	LINE/L2	3352	3400	(26)	2797748
14	27.1	0.0	0.0	chr4	6105913	6105956	(184108599)	+	(GCTCCC)n	Simple_repeat	1	44	(0)	2797749
18	20.2	1.6	4.8	chr4	6575106	6575167	(183639388)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	2798642
14	22.2	2.3	2.2	chr4	6575216	6575259	(183639296)	+	(GCT)n	Simple_repeat	1	45	(0)	2798643
322	31.9	0.0	6.6	chr4	6575451	6575571	(183638984)	+	MIR3	SINE/MIR	42	154	(54)	2798644
120	43.0	0.7	0.4	chr4	6664843	6665607	(183548948)	+	(CACA)n	Simple_repeat	1	767	(0)	2798838
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
1813	14.6	0.6	3.4	chr4	15702669	15702989	(174511566)	C	AluJb	SINE/Alu	(0)	312	1	2813091
24	18.4	0.0	0.0	chr4	15703171	15703219	(174511336)	+	(GCT)n	Simple_repeat	1	49	(0)	2813092
11	28.0	0.0	3.9	chr4	15703419	15703469	(174511086)	+	G-rich	Low_complexity	1	51	(0)	2813093
309	24.5	6.9	6.9	chr4	16775721	16775821	(173438734)	+	L2c	LINE/L2	3266	3385	(41)	2814917
277	29.0	1.4	0.0	chr4	16776102	16776170	(173438385)	+	MIR1_Amn	SINE/MIR	38	107	(123)	2814918
15	20.3	0.0	8.3	chr4	17781784	17781843	(172432712)	+	(GGACAG)n	Simple_repeat	1	60	(0)	2816919
58	1.9	0.0	0.0	chr4	24470272	24470325	(165744230)	+	(AC)n	Simple_repeat	1	54	(0)	2827178
31	20.8	0.0	0.0	chr4	24471317	24471378	(165743177)	+	(CA)n	Simple_repeat	1	62	(0)	2827179
13	28.4	0.0	2.0	chr4	24584229	24584277	(165630278)	+	(CCCGG)n	Simple_repeat	1	49	(0)	2827350
22	27.2	1.4	2.8	chr4	24584565	24584635	(165629920)	+	(GC)n	Simple_repeat	1	72	(0)	2827351
2596	5.7	0.0	0.0	chr4	25566879	25567177	(164647378)	C	AluYe5	SINE/Alu	(11)	299	1	2829225
734	28.7	8.8	5.9	chr4	25567453	25567891	(164646664)	C	MARNA	DNA/TcMar-Mariner	(68)	518	63	2829226
203	30.4	0.0	10.0	chr4	25578141	25578263	(164636292)	C	MIRc	SINE/MIR	(151)	117	6	2829254
202	28.0	4.5	7.0	chr4	25578368	25578421	(164636134)	C	X7A_LINE	LINE/CR1	(84)	166	115	2829255
48	0.0	0.0	0.0	chr4	25578422	25578462	(164636093)	+	(GT)n	Simple_repeat	1	41	(0)	2829256
202	28.0	4.5	7.0	chr4	25578463	25578522	(164636033)	C	X7A_LINE	LINE/CR1	(143)	124	55	2829255
436	30.1	7.7	3.5	chr4	26858026	26858225	(163356330)	C	MIRb	SINE/MIR	(31)	237	29	2831730
15	14.2	10.6	0.0	chr4	26860767	26860813	(163353742)	+	(GCG)n	Simple_repeat	1	52	(0)	2831734
36	30.6	1.8	3.5	chr4	30721980	30722149	(159492406)	+	(CGG)n	Simple_repeat	1	173	(0)	2837094
21	26.6	1.4	1.4	chr4	37453961	37454029	(152760526)	+	(CCG)n	Simple_repeat	1	70	(0)	2846127
271	24.0	3.9	6.5	chr4	39459232	39459338	(150755217)	C	MIR	SINE/MIR	(0)	262	159	2849675
22	21.2	4.6	0.0	chr4	39698238	39698302	(150516253)	+	(GGCGGT)n	Simple_repeat	1	68	(0)	2850244
20	28.4	2.4	2.3	chr4	44447923	44448006	(145766549)	+	(CGC)n	Simple_repeat	1	86	(0)	2858300
13	16.3	0.0	5.3	chr4	47032599	47032636	(143181919)	+	(CACCCG)n	Simple_repeat	1	38	(0)	2861648
13	23.3	0.0	2.4	chr4	48269813	48269854	(141944701)	+	(GAGCCCA)n	Simple_repeat	1	42	(0)	2863589
22	31.4	3.0	2.9	chr4	48269850	48269981	(141944574)	+	(CGCCC)n	Simple_repeat	1	136	(0)	2863590
14	19.2	2.2	4.3	chr4	48483484	48483528	(141731027)	+	(GGC)n	Simple_repeat	1	46	(0)	2863933
34	29.4	1.6	5.4	chr4	48483646	48483828	(141730727)	+	(GGCCCC)n	Simple_repeat	1	186	(0)	2863934
12	22.4	0.0	2.6	chr4	52751641	52751678	(137462877)	+	G-rich	Low_complexity	1	38	(0)	2866702
202	28.6	18.3	0.6	chr4	52752036	52752197	(137462358)	C	L2a	LINE/L2	(8)	3418	3222	2866703
225	30.0	1.4	1.4	chr4	53366434	53366504	(136848051)	C	MIRc	SINE/MIR	(22)	246	176	2867590
2546	4.6	0.3	1.0	chr4	56436713	56437014	(133777541)	+	AluSx	SINE/Alu	1	300	(12)	2872602
15	0.0	0.0	0.0	chr4	56437057	56437073	(133777482)	+	(GT)n	Simple_repeat	1	17	(0)	2872603
20	29.4	0.0	4.1	chr4	56437116	56437188	(133777367)	+	(GT)n	Simple_repeat	1	73	(0)	2872603
49	0.0	0.0	0.0	chr4	56437257	56437298	(133777257)	+	(GT)n	Simple_repeat	1	42	(0)	2872604
41	30.5	3.5	3.4	chr4	56505866	56506094	(133708461)	+	A-rich	Low_complexity	1	237	(0)	2872718
15	13.7	0.0	5.6	chr4	56908351	56908386	(133306169)	+	(CGG)n	Simple_repeat	1	36	(0)	2873605
229	29.6	3.6	0.0	chr4	57191730	57191810	(133022745)	C	LTR104_Mam	LTR/Gypsy	(769)	740	657	2874125
732	21.7	5.4	0.0	chr4	57191894	57192050	(133022505)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	2874126
996	31.7	7.4	7.1	chr4	58599906	58600510	(131614045)	C	L2	LINE/L2	(2305)	1114	508	2875990
855	29.9	10.2	8.6	chr4	58600511	58601226	(131613329)	C	MER21C	LTR/ERVL	(121)	817	56	2875991
19	18.9	0.0	0.0	chr4	61201880	61201915	(129012640)	+	(CA)n	Simple_repeat	1	36	(0)	2879119
26	8.1	2.6	0.0	chr4	61202742	61202780	(129011775)	+	(GT)n	Simple_repeat	1	40	(0)	2879120
18	21.1	1.7	4.9	chr4	68349770	68349829	(121864726)	+	(CCG)n	Simple_repeat	1	61	(0)	2888211
641	28.9	8.0	2.0	chr4	68451659	68451905	(121762650)	C	MIRb	SINE/MIR	(0)	268	6	2888383
14	12.7	0.0	0.0	chr4	68452247	68452272	(121762283)	+	(TAT)n	Simple_repeat	1	26	(0)	2888384
7682	24.0	5.6	4.6	chr4	69023682	69027369	(121187186)	C	L1PA13	LINE/L1	(3745)	4396	635	2888973
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
6999	19.9	3.9	1.0	chr4	71813588	71814923	(118399632)	C	MER52A	LTR/ERV1	(1)	1754	379	2892691
6451	14.6	2.4	3.6	chr4	73984651	73985286	(116229269)	+	Tigger3b	DNA/TcMar-Tigger	581	1231	(0)	2895577
16	14.5	5.3	0.0	chr4	73998498	73998535	(116216020)	+	(CAG)n	Simple_repeat	1	40	(0)	2895598
13	19.6	2.2	4.3	chr4	74158303	74158347	(116056208)	+	(GGTGGC)n	Simple_repeat	1	46	(0)	2895789
14	19.4	2.3	2.3	chr4	75724900	75724942	(114489613)	+	G-rich	Low_complexity	1	44	(0)	2897949
22	22.1	1.7	0.0	chr4	80203221	80203278	(110011277)	+	(GCTGCG)n	Simple_repeat	1	59	(0)	2904529
16	37.5	1.2	0.0	chr4	80203279	80203303	(110011252)	+	(CCG)n	Simple_repeat	3	86	(0)	2904530
300	21.4	14.3	0.0	chr4	83034764	83034847	(107179708)	+	MER5C	DNA/hAT-Charlie	216	313	(0)	2908719
302	30.3	0.9	0.9	chr4	83110465	83110574	(107103981)	+	L2a	LINE/L2	3295	3404	(22)	2908872
19	19.5	3.2	3.1	chr4	83334720	83334781	(106879774)	+	(CAGCAG)n	Simple_repeat	1	64	(0)	2909319
17	20.9	2.9	5.7	chr4	83334900	83334967	(106879588)	+	(CCTC)n	Simple_repeat	1	70	(0)	2909320
14	16.4	2.9	0.0	chr4	84965922	84965955	(105248600)	+	(CCGACC)n	Simple_repeat	1	35	(0)	2911909
2463	7.3	0.3	0.0	chr4	87221116	87221417	(102993138)	+	AluSc5	SINE/Alu	1	303	(6)	2915110
1921	17.6	0.3	0.7	chr4	87422068	87422369	(102792186)	+	AluJb	SINE/Alu	1	301	(11)	2915482
472	33.3	12.3	3.9	chr4	88285089	88285819	(101928736)	C	L2a	LINE/L2	(0)	3426	2612	2916879
23	31.3	5.2	0.7	chr4	88379171	88379305	(101835250)	+	G-rich	Low_complexity	1	142	(0)	2917064
16523	10.0	1.9	4.3	chr4	91624619	91627498	(98587057)	+	HERVH-int	LTR/ERV1	246	2995	(4718)	2921368
7256	11.8	0.3	0.0	chr4	92253176	92254186	(97960369)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	567	2922045
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
3302	27.6	5.5	5.6	chr4	92255532	92257526	(97957029)	C	L1M2	LINE/L1	(4787)	2062	10	2922047
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
12526	17.9	3.5	0.2	chr4	92431650	92433806	(97780749)	C	L1MA3	LINE/L1	(5322)	2243	12	2922271
3246	6.5	0.4	1.1	chr4	92444204	92444654	(97769901)	C	LTR7	LTR/ERV1	(2)	448	1	2922279
3275	22.4	6.4	6.3	chr4	92520063	92520954	(97693601)	C	HERVL-int	LTR/ERVL	(0)	5654	4762	2922382
1992	10.5	19.4	0.6	chr4	97141294	97141656	(93072899)	C	LTR7	LTR/ERV1	(2)	448	1	2928563
13	27.6	5.6	1.3	chr4	98995966	98996036	(91218519)	+	(CTC)n	Simple_repeat	1	75	(0)	2931109
2117	22.9	13.0	3.4	chr4	100912723	100913636	(89300919)	C	L1ME1	LINE/L1	(4134)	2266	1252	2933641
1616	18.2	4.3	3.5	chr4	100913640	100913843	(89300712)	C	MER2	DNA/TcMar-Tigger	(0)	345	140	2933645
1845	14.0	9.4	0.0	chr4	100913844	100914150	(89300405)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2933646
1502	23.2	1.9	9.3	chr4	103429277	103429727	(86784828)	C	ERV3-16A3_LTR	LTR/ERVL	(5)	417	1	2937051
18	29.9	0.0	1.6	chr4	104494731	104494793	(85719762)	+	GA-rich	Low_complexity	1	63	(0)	2938271
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
355	28.7	6.8	5.2	chr4	104915805	104915977	(85298578)	C	MLT1J2-int	LTR/ERVL-MaLR	(1194)	193	18	2938808
768	26.7	13.1	5.8	chr4	104915995	104916326	(85298229)	C	MLT1J2	LTR/ERVL-MaLR	(7)	441	79	2938808
2282	12.1	0.0	0.7	chr4	104916327	104916631	(85297924)	+	AluSx	SINE/Alu	1	303	(9)	2938816
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
15	12.2	0.0	0.0	chr4	109302706	109302732	(80911823)	+	(GTGA)n	Simple_repeat	1	27	(0)	2944734
13	25.1	6.6	0.0	chr4	109302732	109302792	(80911763)	+	(GCGCCCG)n	Simple_repeat	1	65	(0)	2944735
13	19.3	0.0	10.2	chr4	109433779	109433789	(80780766)	+	(TCCC)n	Simple_repeat	1	58	(0)	2944950
13	20.3	4.3	2.0	chr4	109433790	109433836	(80780719)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	2944951
12	10.0	0.0	0.0	chr4	109815862	109815883	(80398672)	+	(GGAG)n	Simple_repeat	1	22	(0)	2945572
1841	10.3	9.7	0.0	chr4	112645996	112646266	(77568289)	C	AluSx3	SINE/Alu	(8)	303	4	2949529
17	13.7	0.0	0.0	chr4	112706393	112706424	(77508131)	+	(CACA)n	Simple_repeat	1	32	(0)	2949676
17	30.3	2.9	1.4	chr4	112706476	112706545	(77508010)	+	(AC)n	Simple_repeat	1	72	(0)	2949677
13	6.5	5.6	5.3	chr4	112751608	112751643	(77462912)	+	G-rich	Low_complexity	1	38	(0)	2949791
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
17	21.4	10.2	1.0	chr4	118033558	118033645	(72180910)	+	G-rich	Low_complexity	1	97	(0)	2956363
20	12.0	0.0	2.6	chr4	119628968	119629005	(70585550)	+	(GGC)n	Simple_repeat	1	38	(0)	2958742
75	8.5	1.7	1.7	chr4	121380133	121380248	(68834307)	+	(GA)n	Simple_repeat	1	118	(0)	2961003
14	13.1	11.5	1.7	chr4	121823742	121823793	(68390762)	+	(CAGCC)n	Simple_repeat	1	58	(0)	2961635
404	15.6	4.2	3.2	chr4	123304532	123304624	(66909931)	C	UCON68	Unknown	(34)	98	5	2963758
16	0.0	4.3	0.0	chr4	123505553	123505575	(66708980)	+	(TGA)n	Simple_repeat	1	24	(0)	2964102
20	0.0	0.0	0.0	chr4	123505599	123505620	(66708935)	+	(A)n	Simple_repeat	1	22	(0)	2964103
17	25.9	0.0	1.9	chr4	123505639	123505690	(66708865)	+	(CGC)n	Simple_repeat	1	52	(0)	2964104
270	33.3	6.2	2.0	chr4	124636743	124636941	(65577614)	C	MamRTE1	LINE/RTE-BovB	(113)	3699	3492	2965534
18	13.6	3.7	5.4	chr4	124712247	124712300	(65502255)	+	(CTCCCG)n	Simple_repeat	1	56	(0)	2965643
23	24.2	1.6	0.0	chr4	124712431	124712493	(65502062)	+	(CCG)n	Simple_repeat	1	64	(0)	2965644
34	5.6	0.0	0.0	chr4	125315055	125315092	(64899463)	+	(TG)n	Simple_repeat	1	38	(0)	2966465
14	4.9	0.0	0.0	chr4	125315653	125315673	(64898882)	+	(GGC)n	Simple_repeat	1	21	(0)	2966466
2319	11.3	4.6	1.3	chr4	130772493	130772869	(59441686)	+	HERVH-int	LTR/ERV1	7324	7713	(0)	2973827
2518	7.6	11.4	0.5	chr4	130772870	130773268	(59441287)	+	LTR7	LTR/ERV1	1	448	(2)	2973827
699	27.4	7.5	5.0	chr4	130773276	130773652	(59440903)	+	L1MC4a	LINE/L1	5781	6167	(1715)	2973826
501	31.5	7.0	1.4	chr4	132494834	132495290	(57719265)	C	L1ME4b	LINE/L1	(245)	647	255	2975907
2503	6.7	13.8	0.5	chr4	132495300	132495687	(57718868)	+	LTR7	LTR/ERV1	1	448	(2)	2975908
15	8.8	0.0	0.0	chr4	133152406	133152429	(57062126)	+	(TGC)n	Simple_repeat	1	24	(0)	2976653
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
15	17.7	3.5	6.7	chr4	139177227	139177304	(51037251)	+	(CCT)n	Simple_repeat	1	75	(0)	2984095
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
26	17.0	0.0	0.0	chr4	140154463	140154508	(50060047)	+	(TG)n	Simple_repeat	1	46	(0)	2985807
188	26.4	16.3	1.4	chr4	140523750	140523822	(49690733)	+	MIRb	SINE/MIR	131	216	(52)	2986358
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
12	21.0	2.5	2.4	chr4	145481658	145481697	(44732858)	+	G-rich	Low_complexity	1	41	(0)	2992972
13	5.0	0.0	4.3	chr4	145481722	145481744	(44732811)	+	(GCG)n	Simple_repeat	1	23	(0)	2992973
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
27	34.7	0.0	0.0	chr4	146633068	146633159	(43581396)	+	(TG)n	Simple_repeat	1	92	(0)	2994594
12	19.5	0.0	8.3	chr4	151015367	151015414	(39199141)	+	G-rich	Low_complexity	1	48	(0)	3000636
23	21.4	1.6	1.6	chr4	151409002	151409062	(38805493)	+	(GGC)n	Simple_repeat	1	62	(0)	3001452
36	7.2	3.5	0.0	chr4	151409092	151409149	(38805406)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	3001453
14	22.8	0.0	0.0	chr4	152536311	152536346	(37678209)	+	(CGC)n	Simple_repeat	1	36	(0)	3003141
312	23.1	0.7	14.1	chr4	152850581	152850736	(37363819)	+	MER5A1	DNA/hAT-Charlie	26	160	(6)	3003668
22	24.6	0.0	0.0	chr4	152935823	152935871	(37278684)	+	(GT)n	Simple_repeat	1	49	(0)	3003770
13	11.1	0.0	6.1	chr4	152936129	152936161	(37278394)	+	(GGTGGC)n	Simple_repeat	1	33	(0)	3003771
14	12.2	0.0	0.0	chr4	152936269	152936295	(37278260)	+	(CCGCC)n	Simple_repeat	1	27	(0)	3003772
15	27.2	3.5	0.0	chr4	153249579	153249636	(36964919)	+	(CCGCCC)n	Simple_repeat	1	60	(0)	3004303
43	2.3	0.0	0.0	chr4	153466265	153466308	(36748247)	+	(GCGGG)n	Simple_repeat	1	44	(0)	3004724
13	4.8	4.5	0.0	chr4	153759975	153759996	(36454559)	+	(GCG)n	Simple_repeat	1	23	(0)	3005152
13	30.0	6.0	1.1	chr4	153760256	153760320	(36454235)	+	GA-rich	Low_complexity	1	89	(0)	3005153
15	0.0	5.3	0.0	chr4	153760321	153760339	(36454216)	+	(AG)n	Simple_repeat	1	20	(0)	3005154
13	25.2	0.0	2.3	chr4	154491937	154491980	(35722575)	+	(CGCCTC)n	Simple_repeat	1	44	(0)	3006120
33	19.2	2.8	0.0	chr4	157221860	157221930	(32992625)	+	(GT)n	Simple_repeat	1	73	(0)	3009826
13	13.7	4.3	6.2	chr4	158768828	158768873	(31445682)	+	(CCGC)n	Simple_repeat	1	48	(0)	3011882
24	18.2	0.9	2.6	chr4	158768897	158768961	(31445594)	+	(GCC)n	Simple_repeat	1	63	(0)	3011883
2328	8.3	0.3	0.3	chr4	163167011	163167299	(27047256)	+	AluSg	SINE/Alu	1	289	(21)	3017677
13	21.2	2.1	4.2	chr4	167234067	167234113	(22980442)	+	(CCG)n	Simple_repeat	1	48	(0)	3023322
670	37.0	0.8	0.0	chr4	168153656	168153893	(22060662)	C	MIR	SINE/MIR	(11)	251	12	3024434
30	3.5	0.0	0.0	chr4	168153982	168154011	(22060544)	+	(AC)n	Simple_repeat	1	30	(0)	3024435
66	0.0	0.0	0.0	chr4	168816818	168816873	(21397682)	+	(GT)n	Simple_repeat	1	56	(0)	3025384
13	20.2	2.0	5.8	chr4	168832071	168832121	(21382434)	+	(CCCGCT)n	Simple_repeat	1	52	(0)	3025411
22	22.7	0.0	0.0	chr4	169010176	169010221	(21204334)	+	A-rich	Low_complexity	1	46	(0)	3025634
13	10.0	0.0	0.0	chr4	169823718	169823739	(20390816)	+	(GGT)n	Simple_repeat	1	22	(0)	3026898
14	23.1	2.1	2.0	chr4	169824035	169824082	(20390473)	+	(CCTGG)n	Simple_repeat	1	49	(0)	3026899
1317	10.8	7.4	4.9	chr4	169824160	169824383	(20390172)	+	MER30	DNA/hAT-Charlie	1	230	(0)	3026900
219	33.8	2.7	0.0	chr4	170089444	170089514	(20125041)	+	L2b	LINE/L2	3290	3362	(25)	3027352
16	17.4	8.8	2.7	chr4	170089984	170090051	(20124504)	+	(GCCGC)n	Simple_repeat	1	74	(0)	3027354
39	0.0	0.0	2.6	chr4	173074848	173074885	(17139670)	+	(AC)n	Simple_repeat	1	38	(0)	3031095
12	20.8	0.0	2.9	chr4	173335389	173335423	(16879132)	+	(CTGGC)n	Simple_repeat	1	35	(0)	3031451
56	18.6	0.9	0.0	chr4	174120517	174120622	(16093933)	+	(TG)n	Simple_repeat	1	107	(0)	3032541
22	23.4	1.0	7.1	chr4	176320228	176320324	(13894231)	+	(GGCCGG)n	Simple_repeat	1	98	(0)	3035383
12	18.8	2.6	2.6	chr4	176320872	176320909	(13893646)	+	(TTTTTCT)n	Simple_repeat	1	39	(0)	3035384
2066	10.9	4.4	0.0	chr4	179163838	179164120	(11050435)	C	AluSp	SINE/Alu	(12)	301	6	3039148
696	24.2	8.0	4.8	chr4	179164121	179164294	(11050261)	C	L1MCa	LINE/L1	(4169)	2248	2079	3039146
998	26.6	11.3	4.3	chr4	181949410	181949981	(8264574)	+	L2a	LINE/L2	2545	3189	(237)	3042758
3054	8.3	2.9	0.7	chr4	181949982	181950417	(8264138)	+	LTR7	LTR/ERV1	3	448	(2)	3042759
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
14	16.3	4.7	2.2	chr4	182144437	182144479	(8070076)	+	(GGAGGCG)n	Simple_repeat	1	45	(0)	3043030
23	21.4	2.7	2.6	chr4	182144582	182144655	(8069900)	+	(CGCCCC)n	Simple_repeat	1	76	(0)	3043031
24	19.1	3.6	7.8	chr4	182144670	182144780	(8069775)	+	(GGCGC)n	Simple_repeat	1	115	(0)	3043032
13	5.3	0.0	0.0	chr4	182917732	182917751	(7296804)	+	(TGG)n	Simple_repeat	1	20	(0)	3044081
238	22.6	0.0	0.0	chr4	182960126	182960626	(7253929)	+	(CA)n	Simple_repeat	1	501	(0)	3044160
2888	18.4	3.9	2.5	chr4	183106445	183107079	(7107476)	C	L1MB7	LINE/L1	(47)	6137	5494	3044399
34	13.4	6.0	0.0	chr4	183107080	183107146	(7107409)	+	(CT)n	Simple_repeat	1	71	(0)	3044400
1825	14.9	5.2	2.0	chr4	183107147	183107447	(7107108)	C	AluSz	SINE/Alu	(1)	311	1	3044401
25	11.8	0.0	0.0	chr4	183262770	183262807	(6951748)	+	(GT)n	Simple_repeat	1	38	(0)	3044671
379	28.9	11.8	3.4	chr4	183262827	183263034	(6951521)	+	MIR	SINE/MIR	33	260	(2)	3044672
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
17	22.5	0.0	0.0	chr4	183758285	183758320	(6456235)	+	A-rich	Low_complexity	1	36	(0)	3045562
43	9.0	0.0	0.0	chr4	184292674	184292732	(5921823)	+	(GT)n	Simple_repeat	1	59	(0)	3046316
76	9.1	0.0	0.0	chr4	184292783	184292887	(5921668)	+	(GT)n	Simple_repeat	1	105	(0)	3046316
38	12.0	0.0	0.0	chr4	184292942	184293005	(5921550)	+	(TG)n	Simple_repeat	1	64	(0)	3046317
255	3.5	0.0	0.0	chr4	184310471	184310499	(5904056)	+	MER96	DNA/hAT-Tip100	51	79	(96)	3046346
286	31.0	0.0	3.9	chr4	184648208	184648311	(5566244)	C	L2b	LINE/L2	(601)	2818	2719	3046945
137	26.3	0.5	1.1	chr4	184987489	184987860	(5226695)	+	(GTGTGT)n	Simple_repeat	1	374	(0)	3047495
320	27.9	7.6	0.0	chr4	185005042	185005163	(5209392)	C	L2b	LINE/L2	(9)	3366	3235	3047523
13	10.4	6.1	2.9	chr4	185471708	185471740	(4742815)	+	(CCG)n	Simple_repeat	1	35	(0)	3048339
11	14.4	7.5	2.3	chr5	344074	344113	(181194146)	+	G-rich	Low_complexity	1	43	(0)	3055345
345	27.8	1.8	2.3	chr5	345460	345619	(181192640)	+	(GT)n	Simple_repeat	2	158	(0)	3055351
279	24.0	5.1	3.9	chr5	345887	345964	(181192295)	C	LTR40c	LTR/ERVL	(274)	191	113	3055352
60	1.8	0.0	0.0	chr5	443221	443278	(181094981)	+	(GGC)n	Simple_repeat	1	58	(0)	3055430
27	14.6	7.4	2.3	chr5	1246817	1246897	(180291362)	+	(TCCCTCC)n	Simple_repeat	1	87	(0)	3056077
17	25.6	0.0	0.0	chr5	1260388	1260431	(180277828)	+	(CA)n	Simple_repeat	1	44	(0)	3056087
272	17.5	1.7	0.0	chr5	1316513	1316569	(180221690)	+	MER88	LTR/ERVL	4	61	(403)	3056136
236	20.0	1.4	2.8	chr5	1316592	1316663	(180221596)	+	MER88	LTR/ERVL	148	218	(246)	3056136
331	30.7	7.0	2.7	chr5	4549043	4549208	(176989051)	C	L2a	LINE/L2	(195)	3192	3016	3059509
17	4.5	0.0	4.0	chr5	5183757	5183799	(176354460)	+	(GT)n	Simple_repeat	1	41	(0)	3060261
44	0.0	0.0	0.0	chr5	10637426	10637463	(170900796)	+	(AC)n	Simple_repeat	1	38	(0)	3067275
16	7.5	0.0	6.2	chr5	11903691	11903722	(169634537)	+	(CCG)n	Simple_repeat	1	32	(0)	3068898
12	12.2	3.7	0.0	chr5	11903783	11903809	(169634450)	+	(CGCCC)n	Simple_repeat	1	28	(0)	3068899
3482	15.6	3.6	3.5	chr5	12661339	12661734	(168876525)	C	LTR9C	LTR/ERV1	(0)	666	285	3069840
7596	13.4	16.0	0.1	chr5	12661735	12663059	(168875200)	+	LTR12C	LTR/ERV1	3	1577	(2)	3069841
11	7.5	6.7	3.1	chr5	13554006	13554035	(167984224)	+	(GCCACA)n	Simple_repeat	1	32	(0)	3070965
16	18.1	4.5	0.0	chr5	13554061	13554104	(167984155)	+	(CAGCGC)n	Simple_repeat	1	46	(0)	3070966
18	20.4	5.4	0.0	chr5	14581967	14582022	(166956237)	+	G-rich	Low_complexity	1	59	(0)	3072380
23	20.4	4.3	1.4	chr5	16179074	16179142	(165359117)	+	(GCT)n	Simple_repeat	1	72	(0)	3074628
309	14.0	5.0	1.7	chr5	31532727	31532784	(150005475)	C	MIR	SINE/MIR	(187)	75	16	3095069
732	26.1	18.5	1.7	chr5	32445345	32445699	(149092560)	C	L2a	LINE/L2	(39)	3387	2960	3096863
1378	26.4	10.4	2.6	chr5	34718995	34719526	(146818733)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	2	3100288
1337	21.5	4.3	0.7	chr5	35617351	35617638	(145920621)	C	AluSx3	SINE/Alu	(11)	300	2	3101644
13	13.6	2.9	2.9	chr5	36241802	36241835	(145296424)	+	G-rich	Low_complexity	1	35	(0)	3102473
13	9.6	0.0	0.0	chr5	36242066	36242088	(145296171)	+	(TTTG)n	Simple_repeat	1	23	(0)	3102474
2699	5.3	0.3	0.0	chr5	38845024	38845322	(142692937)	+	AluY	SINE/Alu	1	300	(11)	3106771
14	19.9	4.2	2.0	chr5	39074435	39074482	(142463777)	+	(CCCCG)n	Simple_repeat	1	50	(0)	3107042
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
12	23.3	0.0	0.0	chr5	40835471	40835505	(140702754)	+	(TTGCTG)n	Simple_repeat	1	35	(0)	3109515
12	16.3	5.4	9.0	chr5	41904484	41904557	(139633702)	+	G-rich	Low_complexity	1	78	(0)	3110987
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
14	11.2	3.5	0.0	chr5	43121157	43121185	(138417074)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3112576
11	24.1	2.6	0.0	chr5	43603102	43603140	(137935119)	+	G-rich	Low_complexity	1	40	(0)	3113334
14	20.7	2.6	0.0	chr5	52989211	52989249	(128549010)	+	G-rich	Low_complexity	1	40	(0)	3119683
26	20.5	0.0	0.0	chr5	53480173	53480231	(128058028)	+	(CA)n	Simple_repeat	1	59	(0)	3120330
15	21.4	2.3	0.0	chr5	53480299	53480341	(128057918)	+	(CCCCACC)n	Simple_repeat	1	44	(0)	3120331
13	22.4	1.5	7.5	chr5	53480342	53480363	(128057896)	+	(TCCCCC)n	Simple_repeat	2	67	(0)	3120332
14	17.9	5.1	0.0	chr5	55307834	55307872	(126230387)	+	A-rich	Low_complexity	1	41	(0)	3123044
12	14.6	0.0	5.9	chr5	55308084	55308117	(126230142)	+	A-rich	Low_complexity	1	34	(0)	3123045
1441	26.9	9.4	6.8	chr5	55484619	55485281	(126052978)	+	MER21C	LTR/ERVL	135	816	(122)	3123303
16	20.2	3.2	4.7	chr5	61330917	61330978	(120207281)	+	G-rich	Low_complexity	1	64	(0)	3132104
13	20.1	6.5	0.0	chr5	61330994	61331039	(120207220)	+	(CGCCCGC)n	Simple_repeat	1	49	(0)	3132105
5460	14.9	1.8	3.0	chr5	62074091	62075004	(119463255)	C	MER4D	LTR/ERV1	(0)	903	1	3133158
42	0.0	0.0	0.0	chr5	62075158	62075193	(119463066)	+	(GT)n	Simple_repeat	1	36	(0)	3133159
12	18.0	8.8	4.0	chr5	62306381	62306448	(119231811)	+	(CTCCGCC)n	Simple_repeat	1	74	(0)	3133536
21	18.5	1.3	7.6	chr5	65722126	65722203	(115816056)	+	G-rich	Low_complexity	1	79	(0)	3138300
14	24.5	0.0	5.2	chr5	65925454	65925511	(115612748)	+	G-rich	Low_complexity	1	58	(0)	3138686
18	20.4	5.6	2.7	chr5	65925578	65925648	(115612611)	+	(CTGCCCC)n	Simple_repeat	1	75	(0)	3138687
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
1822	22.9	6.5	3.3	chr5	68922180	68922761	(112615498)	+	LTR48B	LTR/ERV1	1	644	(0)	3142912
464	32.7	0.2	1.2	chr5	68964574	68966234	(112572025)	+	(CA)n	Simple_repeat	1	1665	(0)	3142982
185	29.7	12.9	4.3	chr5	71587761	71587922	(109950337)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3147718
53	0.0	0.0	0.0	chr5	72210451	72210495	(109327764)	+	(GT)n	Simple_repeat	1	45	(0)	3148636
12	10.1	9.4	0.0	chr5	72320529	72320560	(109217699)	+	G-rich	Low_complexity	1	35	(0)	3148804
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
19	21.4	3.7	0.0	chr5	73120484	73120537	(108417722)	+	(CCTGC)n	Simple_repeat	1	56	(0)	3150026
12	0.0	8.0	3.7	chr5	75511355	75511379	(106026880)	+	(CCG)n	Simple_repeat	1	27	(0)	3153647
13	8.8	0.0	3.9	chr5	75511436	75511461	(106026798)	+	(GCC)n	Simple_repeat	1	26	(0)	3153648
12	19.5	2.6	2.6	chr5	75511521	75511558	(106026701)	+	A-rich	Low_complexity	1	39	(0)	3153649
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
11	24.6	0.0	2.5	chr5	76818919	76818958	(104719301)	+	(GCGGAGG)n	Simple_repeat	1	40	(0)	3155688
14	20.1	2.0	4.0	chr5	76818945	76818993	(104719266)	+	G-rich	Low_complexity	1	50	(0)	3155689
214	24.7	4.9	1.3	chr5	77218330	77218407	(104319852)	C	MIR	SINE/MIR	(93)	169	89	3156389
240	22.8	0.0	1.7	chr5	77218736	77218793	(104319466)	+	MIRb	SINE/MIR	212	268	(0)	3156390
46	0.0	0.0	0.0	chr5	77640217	77640255	(103898004)	+	(TG)n	Simple_repeat	1	39	(0)	3156922
18	16.9	0.0	0.0	chr5	77851369	77851401	(103686858)	+	(GT)n	Simple_repeat	1	33	(0)	3157269
45	33.7	2.8	0.9	chr5	77851555	77851767	(103686492)	+	(CGTGTG)n	Simple_repeat	1	217	(0)	3157270
20	19.0	4.8	1.5	chr5	77851978	77852052	(103686207)	+	(CTCCCGC)n	Simple_repeat	1	77	(0)	3157271
27	16.0	1.7	1.7	chr5	77852620	77852705	(103685554)	+	GA-rich	Low_complexity	1	86	(0)	3157272
36	0.0	0.0	0.0	chr5	77852876	77852906	(103685353)	+	(CA)n	Simple_repeat	1	31	(0)	3157273
11	12.8	8.7	4.0	chr5	79991100	79991145	(101547114)	+	(CCTGCGC)n	Simple_repeat	1	50	(0)	3160666
558	25.8	20.6	0.8	chr5	80097521	80097910	(101440349)	+	LTR16C	LTR/ERVL	2	476	(13)	3160848
2163	10.3	1.4	0.0	chr5	80184885	80185166	(101353093)	C	AluSx	SINE/Alu	(18)	294	9	3161014
410	28.4	6.1	1.7	chr5	80185286	80185457	(101352802)	+	MIRb	SINE/MIR	60	239	(29)	3161015
3561	5.8	0.2	0.5	chr5	80185505	80185953	(101352306)	C	LTR7	LTR/ERV1	(2)	448	1	3161016
30	11.2	0.0	6.2	chr5	80256092	80256156	(101282103)	+	(GCCCC)n	Simple_repeat	1	65	(0)	3161177
2062	10.9	0.0	0.4	chr5	80487424	80487699	(101050560)	C	AluSz	SINE/Alu	(37)	275	1	3161655
126	36.8	1.7	1.1	chr5	80959490	80960133	(100578126)	+	(TG)n	Simple_repeat	1	655	(0)	3162482
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
12	8.6	0.0	6.9	chr5	81852164	81852192	(99686067)	+	(AACA)n	Simple_repeat	1	29	(0)	3163718
32	0.0	0.0	0.0	chr5	81852213	81852242	(99686017)	+	(T)n	Simple_repeat	1	30	(0)	3163719
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
29	7.8	0.0	0.0	chr5	83720899	83720939	(97817320)	+	(GAGTGTGT)n	Simple_repeat	1	41	(0)	3166312
13	15.4	0.0	3.2	chr5	83721219	83721249	(97817010)	+	(ACACC)n	Simple_repeat	1	31	(0)	3166313
4388	18.9	2.0	0.8	chr5	84600017	84600810	(96937449)	C	LTR1E	LTR/ERV1	(0)	804	1	3167479
427	28.6	13.3	3.2	chr5	87413209	87413396	(94124863)	C	L2a	LINE/L2	(240)	3186	2977	3171096
43	0.0	0.0	0.0	chr5	88397614	88397650	(93140609)	+	(CA)n	Simple_repeat	1	37	(0)	3172269
13	21.9	2.3	2.2	chr5	88397657	88397700	(93140559)	+	(CCTCCC)n	Simple_repeat	1	45	(0)	3172270
54	0.0	0.0	0.0	chr5	88685550	88685595	(92852664)	+	(GT)n	Simple_repeat	1	46	(0)	3172667
248	31.3	10.4	3.0	chr5	90410217	90410384	(91127875)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	3174712
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
19	17.6	4.2	5.4	chr5	91383382	91383387	(90154872)	+	(GCGCC)n	Simple_repeat	1	24	(50)	3176169
12	24.6	3.6	3.5	chr5	91383388	91383443	(90154816)	+	(GCC)n	Simple_repeat	1	58	(0)	3176170
19	17.6	4.2	5.4	chr5	91383444	91383452	(90154807)	+	(GCGCC)n	Simple_repeat	25	74	(0)	3176169
12	31.9	0.0	0.0	chr5	91383758	91383804	(90154455)	+	G-rich	Low_complexity	1	47	(0)	3176171
23	20.5	1.5	3.0	chr5	95620841	95620905	(85917354)	+	(CGC)n	Simple_repeat	1	66	(0)	3181416
87	0.0	0.0	0.0	chr5	96808188	96808261	(84729998)	+	(GT)n	Simple_repeat	1	74	(0)	3183133
15	26.3	1.8	1.8	chr5	96936299	96936355	(84601904)	+	GA-rich	Low_complexity	1	57	(0)	3183366
14	21.5	7.6	1.4	chr5	98773829	98773866	(82764393)	+	(CGCTGCG)n	Simple_repeat	1	80	(25)	3185540
14	17.2	3.9	5.7	chr5	98773867	98773917	(82764342)	+	(GCT)n	Simple_repeat	1	53	(0)	3185541
14	21.5	7.6	1.4	chr5	98773918	98773927	(82764332)	+	(CGCTGCG)n	Simple_repeat	81	105	(0)	3185540
17	30.2	1.2	2.5	chr5	98773973	98774052	(82764207)	+	(GCCCGC)n	Simple_repeat	1	81	(0)	3185542
15	33.0	0.0	1.8	chr5	103259272	103259326	(78278933)	+	(GC)n	Simple_repeat	1	55	(0)	3191198
13	27.9	0.0	0.0	chr5	103259393	103259435	(78278824)	+	(GCTC)n	Simple_repeat	1	43	(0)	3191199
3406	6.2	0.0	0.7	chr5	106978588	106979038	(74559221)	+	LTR7	LTR/ERV1	1	448	(2)	3195793
234	33.5	12.6	6.1	chr5	107473146	107473390	(74064869)	C	MamRTE1	LINE/RTE-BovB	(145)	3667	3405	3196388
12	22.9	1.7	6.8	chr5	107670654	107670711	(73867548)	+	G-rich	Low_complexity	1	59	(0)	3196630
21	0.0	0.0	0.0	chr5	107672507	107672529	(73865730)	+	(T)n	Simple_repeat	1	23	(0)	3196633
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
2833	14.3	3.0	3.0	chr5	110536048	110536688	(71001571)	+	HERV4_I-int	LTR/ERV1	42	572	(7244)	3200351
30195	9.7	3.1	1.4	chr5	110536700	110542660	(70995599)	+	HERV4_I-int	LTR/ERV1	522	6539	(0)	3200351
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
11	16.7	5.9	0.0	chr5	111512568	111512601	(70025658)	+	(CCCAGCC)n	Simple_repeat	1	36	(0)	3201527
15	24.9	0.0	0.0	chr5	111758220	111758253	(69780006)	+	(CA)n	Simple_repeat	1	34	(0)	3201828
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
13	5.2	0.0	0.0	chr5	114362181	114362200	(67176059)	+	(GCC)n	Simple_repeat	1	20	(0)	3205506
17	19.0	1.6	6.5	chr5	114362253	114362313	(67175946)	+	(CCCGCA)n	Simple_repeat	1	62	(0)	3205507
22	16.2	2.0	2.0	chr5	114362689	114362738	(67175521)	+	(CAC)n	Simple_repeat	1	51	(0)	3205508
13	20.3	7.8	0.0	chr5	115170211	115170261	(66367998)	+	G-rich	Low_complexity	1	55	(0)	3206388
12	13.9	0.0	0.0	chr5	115180302	115180325	(66357934)	+	(GGC)n	Simple_repeat	1	24	(0)	3206402
15	4.7	0.0	0.0	chr5	115180625	115180646	(66357613)	+	(AAAT)n	Simple_repeat	1	22	(0)	3206403
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
58	22.1	1.5	8.4	chr5	115296655	115296913	(66241346)	+	G-rich	Low_complexity	1	263	(0)	3206588
775	5.9	0.0	1.0	chr5	115626287	115626387	(65911872)	C	AluSz6	SINE/Alu	(0)	312	213	3207058
18	4.8	0.0	0.0	chr5	116575153	116575174	(64963085)	+	(A)n	Simple_repeat	1	22	(0)	3208282
23	32.2	1.0	1.9	chr5	119268626	119268728	(62269531)	+	(CCCGC)n	Simple_repeat	1	104	(0)	3212077
20	4.2	0.0	0.0	chr5	120734338	120734376	(60803883)	+	(TG)n	Simple_repeat	1	39	(0)	3213865
12	20.1	2.9	0.0	chr5	123099742	123099775	(58438484)	+	(CGC)n	Simple_repeat	1	35	(0)	3216931
242	30.5	8.7	4.0	chr5	124468658	124468855	(57069404)	C	LFSINE_Vert	SINE/tRNA	(8)	451	244	3218688
2222	13.6	0.3	0.0	chr5	124580475	124580783	(56957476)	C	AluJr	SINE/Alu	(1)	311	2	3218827
359	22.6	23.0	0.0	chr5	126009760	126009923	(55528336)	C	MLT1L	LTR/ERVL-MaLR	(397)	213	1	3220668
1239	29.5	6.0	2.5	chr5	126009924	126010650	(55527609)	+	L1MEh	LINE/L1	1051	1804	(431)	3220669
568	25.9	8.0	3.7	chr5	126464768	126464995	(55073264)	+	MIRb	SINE/MIR	2	243	(25)	3221224
2486	5.9	0.7	1.0	chr5	126594439	126594743	(54943516)	C	AluSp	SINE/Alu	(7)	306	3	3221483
14	8.1	9.8	2.2	chr5	126777769	126777809	(54760450)	+	(CGACGCG)n	Simple_repeat	1	45	(0)	3221960
394	22.3	16.4	1.6	chr5	127229053	127229229	(54309030)	+	MIRc	SINE/MIR	50	265	(3)	3222562
42	21.1	1.0	1.0	chr5	127517502	127517601	(54020658)	+	G-rich	Low_complexity	1	101	(0)	3222955
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
23	17.1	0.0	0.0	chr5	129461452	129461497	(52076762)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	3225348
12	25.8	5.5	0.0	chr5	132370251	132370305	(49167954)	+	(GGAGCT)n	Simple_repeat	1	58	(0)	3229280
370	24.0	3.7	0.9	chr5	132496496	132496600	(49041659)	+	MIR	SINE/MIR	49	156	(106)	3229454
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
15	18.1	2.6	0.0	chr5	133052191	133052250	(48486009)	+	(GCCGGA)n	Simple_repeat	1	61	(0)	3230468
264	33.0	3.7	2.8	chr5	133052684	133052789	(48485470)	+	L2b	LINE/L2	3266	3372	(3)	3230469
197	25.3	6.2	9.4	chr5	133969084	133969221	(47569038)	C	L2a	LINE/L2	(66)	3360	3237	3231668
11	17.2	7.7	0.0	chr5	134176870	134176908	(47361351)	+	(GGAGGCG)n	Simple_repeat	1	42	(0)	3232043
607	23.6	4.9	6.8	chr5	134465576	134465805	(47072454)	+	MIRb	SINE/MIR	30	268	(0)	3232623
41	2.2	2.1	2.0	chr5	134511101	134511148	(47027111)	+	(AC)n	Simple_repeat	1	49	(0)	3232733
190	33.0	1.0	4.6	chr5	134511311	134511418	(47026841)	+	L2a	LINE/L2	3245	3348	(27)	3232734
226	27.4	0.0	1.6	chr5	134632411	134632473	(46905786)	C	MIR3	SINE/MIR	(61)	147	86	3232958
1976	10.7	3.4	1.7	chr5	134633078	134633239	(46905020)	C	AluSx1	SINE/Alu	(18)	294	137	3232959
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
21	21.8	1.7	1.6	chr5	135028703	135028762	(46509497)	+	(CCCGCG)n	Simple_repeat	1	61	(0)	3233792
447	31.4	7.0	0.7	chr5	135536367	135536547	(46001712)	+	MIRb	SINE/MIR	14	215	(53)	3234435
16	35.2	3.2	2.0	chr5	135579183	135579277	(45958982)	+	(CA)n	Simple_repeat	1	98	(0)	3234503
13	10.8	6.7	0.0	chr5	136132815	136132844	(45405415)	+	(CCTC)n	Simple_repeat	1	32	(0)	3235278
14	20.5	0.0	7.5	chr5	137735580	137735632	(43802627)	+	(CATA)n	Simple_repeat	1	53	(0)	3237435
18	20.1	0.0	0.0	chr5	137753219	137753258	(43785001)	+	(CCG)n	Simple_repeat	1	40	(0)	3237461
26	32.3	0.0	0.0	chr5	137753348	137753433	(43784826)	+	(CCG)n	Simple_repeat	1	86	(0)	3237462
19	24.5	1.3	5.0	chr5	138033058	138033158	(43505101)	+	(GGCGG)n	Simple_repeat	1	97	(0)	3237963
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
14	12.0	0.0	3.5	chr5	138464200	138464228	(43074031)	+	GA-rich	Low_complexity	1	29	(0)	3238914
2498	4.4	2.0	0.3	chr5	138576175	138576467	(42961792)	+	AluY	SINE/Alu	1	298	(13)	3239129
261	29.6	3.3	0.0	chr5	138722519	138722606	(42815653)	C	MLT1O	LTR/ERVL-MaLR	(3)	539	449	3239452
323	30.6	7.2	4.0	chr5	138722608	138722808	(42815451)	+	LTR16C	LTR/ERVL	1	208	(281)	3239453
12	14.7	0.0	5.9	chr5	138722834	138722867	(42815392)	+	(TGTTGG)n	Simple_repeat	1	34	(0)	3239454
2244	12.5	0.3	0.3	chr5	138722997	138723307	(42814952)	C	AluSx	SINE/Alu	(1)	311	1	3239455
40	25.9	2.6	3.1	chr5	138753262	138753416	(42784843)	+	G-rich	Low_complexity	1	159	(0)	3239539
224	32.4	27.6	0.5	chr5	139523998	139524183	(42014076)	+	MIRb	SINE/MIR	24	262	(0)	3240944
21	18.5	0.0	0.0	chr5	139561527	139561569	(41976690)	+	(GGC)n	Simple_repeat	1	43	(0)	3241047
21	8.1	5.1	0.0	chr5	139561727	139561765	(41976494)	+	(CCCCGT)n	Simple_repeat	1	41	(0)	3241048
18	25.5	1.6	1.6	chr5	139561766	139561788	(41976471)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	3241049
16	21.6	3.6	1.8	chr5	139637422	139637476	(41900783)	+	(CCCCG)n	Simple_repeat	1	57	(0)	3241229
403	32.6	8.3	0.5	chr5	139638509	139638730	(41899529)	+	MIRb	SINE/MIR	28	268	(0)	3241230
2463	8.7	0.3	0.0	chr5	139701857	139702188	(41836071)	C	AluSp	SINE/Alu	(0)	313	2	3241332
13	20.8	0.0	0.0	chr5	140346653	140346685	(41191574)	+	(GCCCC)n	Simple_repeat	1	33	(0)	3242426
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
561	30.5	4.4	10.4	chr5	140557796	140558132	(40980127)	+	L2b	LINE/L2	3055	3370	(5)	3242820
12	15.8	0.0	3.3	chr5	141492291	141492320	(40045939)	+	(GCAC)n	Simple_repeat	1	30	(0)	3244076
18	0.0	0.0	0.0	chr5	141693253	141693272	(39844987)	+	(CA)n	Simple_repeat	1	20	(0)	3244421
13	11.1	3.2	3.1	chr5	141758967	141758997	(39779262)	+	GA-rich	Low_complexity	1	32	(0)	3244547
15	29.0	3.2	0.0	chr5	141876360	141876422	(39661837)	+	(GCCGGC)n	Simple_repeat	1	65	(0)	3244777
13	11.5	12.2	1.8	chr5	142357141	142357189	(39181070)	+	(TCCGCC)n	Simple_repeat	1	55	(0)	3245797
1176	17.5	3.2	0.0	chr5	142701742	142701952	(38836307)	+	MER20	DNA/hAT-Charlie	1	218	(1)	3246512
346	21.7	0.0	0.0	chr5	142702019	142702078	(38836181)	C	L2a	LINE/L2	(0)	3426	3367	3246513
470	22.4	10.5	0.7	chr5	142702241	142702420	(38835839)	+	L1ME3G	LINE/L1	428	596	(328)	3246514
19	19.2	0.0	0.0	chr5	145937170	145937205	(35601054)	+	A-rich	Low_complexity	1	36	(0)	3251555
256	31.5	1.4	0.0	chr5	146026364	146026436	(35511823)	+	MIR3	SINE/MIR	60	133	(75)	3251731
503	30.3	2.8	2.8	chr5	146026695	146026945	(35511314)	+	MIR	SINE/MIR	2	252	(10)	3251732
484	31.8	13.1	1.3	chr5	146789544	146789925	(34748334)	C	L2a	LINE/L2	(1)	3425	2992	3253169
35	0.0	0.0	0.0	chr5	146878728	146878759	(34659500)	+	(GCT)n	Simple_repeat	1	32	(0)	3253334
14	18.2	0.0	0.0	chr5	147510016	147510046	(34028213)	+	(AGCC)n	Simple_repeat	1	31	(0)	3254369
15	18.2	4.3	2.1	chr5	147510195	147510240	(34028019)	+	(GCGCAC)n	Simple_repeat	1	48	(0)	3254370
204	34.7	8.3	10.9	chr5	149344959	149345307	(32192952)	+	L2b	LINE/L2	2994	3332	(43)	3257530
251	19.7	7.8	2.0	chr5	150156218	150156324	(31381935)	+	MIR1_Amn	SINE/MIR	81	197	(11)	3259323
471	29.6	9.7	1.6	chr5	150156313	150156559	(31381700)	C	L2b	LINE/L2	(1)	3374	3106	3259324
225	23.8	7.5	8.0	chr5	150156547	150156656	(31381603)	C	MIR1_Amn	SINE/MIR	(24)	184	81	3259325
504	22.3	10.3	2.6	chr5	150156693	150156844	(31381415)	C	MIR1_Amn	SINE/MIR	(27)	203	39	3259326
525	33.0	1.0	3.5	chr5	150175143	150175340	(31362919)	C	MIRb	SINE/MIR	(51)	217	25	3259369
210	19.6	22.6	11.1	chr5	150175725	150175860	(31362399)	C	MIR3	SINE/MIR	(59)	149	2	3259370
206	41.4	4.6	0.0	chr5	150175955	150176058	(31362201)	C	MIR3	SINE/MIR	(56)	152	44	3259371
14	12.7	0.0	0.0	chr5	150656530	150656555	(30881704)	+	(CCG)n	Simple_repeat	1	26	(0)	3260455
37	2.6	0.0	0.0	chr5	150656738	150656776	(30881483)	+	(CGCCCC)n	Simple_repeat	1	39	(0)	3260456
12	11.1	3.2	3.1	chr5	150778679	150778709	(30759550)	+	(GGAGCT)n	Simple_repeat	1	32	(0)	3260680
17	0.0	4.2	0.0	chr5	151686871	151686894	(29851365)	+	(GGCA)n	Simple_repeat	1	25	(0)	3262394
20	17.9	1.6	6.2	chr5	151686990	151687053	(29851206)	+	(CTC)n	Simple_repeat	1	65	(0)	3262395
12	24.5	4.5	0.0	chr5	151758558	151758601	(29779658)	+	(GGC)n	Simple_repeat	1	46	(0)	3262583
283	31.0	7.4	2.2	chr5	151772570	151772792	(29765467)	C	MIRb	SINE/MIR	(0)	262	23	3262616
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
2933	12.3	0.9	4.2	chr5	152686744	152687217	(28851042)	+	LTR22A	LTR/ERVK	1	458	(0)	3264129
296	34.1	0.8	2.4	chr5	152687243	152687368	(28850891)	C	MIR3	SINE/MIR	(77)	131	8	3264130
218	37.7	0.0	0.0	chr5	153276543	153276611	(28261648)	+	MIRc	SINE/MIR	83	151	(117)	3264981
225	27.5	1.8	6.8	chr5	153276622	153276738	(28261521)	C	Charlie18a	DNA/hAT-Charlie	(0)	342	232	3264982
1961	11.3	6.1	0.7	chr5	154691799	154692091	(26846168)	C	AluSx	SINE/Alu	(2)	310	1	3267797
499	31.5	8.7	0.0	chr5	154692271	154692448	(26845811)	+	MIRb	SINE/MIR	73	267	(1)	3267798
233	36.1	6.1	4.2	chr5	154692474	154692655	(26845604)	+	L2b	LINE/L2	2992	3183	(192)	3267799
29	5.7	0.0	0.0	chr5	154858705	154858741	(26679518)	+	(CAGCCCGC)n	Simple_repeat	1	37	(0)	3268203
677	30.5	3.9	1.3	chr5	154858950	154859175	(26679084)	C	MIR	SINE/MIR	(27)	235	4	3268204
253	24.4	4.7	5.8	chr5	157142266	157142352	(24395907)	C	MER5B	DNA/hAT-Charlie	(59)	119	34	3272144
295	22.9	11.4	3.4	chr5	157142398	157142563	(24395696)	C	MIR3	SINE/MIR	(63)	205	24	3272145
19	27.9	4.0	1.3	chr5	159209582	159209656	(22328603)	+	(GC)n	Simple_repeat	1	78	(0)	3275707
14	9.6	0.0	0.0	chr5	159773408	159773430	(21764829)	+	(GCG)n	Simple_repeat	1	23	(0)	3276694
348	27.2	2.6	0.0	chr5	159773820	159773933	(21764326)	C	MIR	SINE/MIR	(67)	195	79	3276695
1209	22.9	12.1	12.3	chr5	160165663	160166166	(21372093)	+	MLT1K	LTR/ERVL-MaLR	4	506	(89)	3277541
203	25.0	5.3	0.0	chr5	160199162	160199233	(21339026)	+	X7A_LINE	LINE/CR1	41	116	(151)	3277634
15	24.9	5.9	1.4	chr5	160287744	160287811	(21250448)	+	(AGGC)n	Simple_repeat	1	72	(0)	3277852
376	22.0	20.4	1.8	chr5	160399516	160399682	(21138577)	+	MIRb	SINE/MIR	5	210	(58)	3278098
363	27.0	23.2	1.8	chr5	163460873	163461098	(18077161)	C	L2a	LINE/L2	(14)	3412	3124	3282584
501	34.6	8.8	4.1	chr5	166075012	166075544	(15462715)	C	LTR85c	LTR/Gypsy?	(166)	657	98	3286220
282	32.7	14.4	3.8	chr5	168281934	168282352	(13255907)	C	L2c	LINE/L2	(17)	3409	2919	3289701
15	12.9	4.2	6.0	chr5	169637178	169637225	(11901034)	+	G-rich	Low_complexity	1	50	(0)	3292109
302	30.4	4.9	6.9	chr5	170743771	170743915	(10794344)	C	MIR	SINE/MIR	(1)	261	120	3294226
12	19.0	7.1	0.0	chr5	170744230	170744271	(10793988)	+	(GGATG)n	Simple_repeat	1	45	(0)	3294227
446	18.3	3.5	0.0	chr5	170744798	170744879	(10793380)	+	MER45A	DNA/hAT-Tip100	60	144	(34)	3294228
349	21.0	0.0	0.0	chr5	170773471	170773532	(10764727)	+	AluJo	SINE/Alu	1	62	(250)	3294269
20	3.3	3.2	0.0	chr5	170862656	170862686	(10675573)	+	(CGGGCG)n	Simple_repeat	1	32	(0)	3294427
339	29.9	10.3	3.4	chr5	171388725	171388932	(10149327)	C	MIRb	SINE/MIR	(16)	252	29	3295187
13	8.1	0.0	6.7	chr5	171521036	171521065	(10017194)	+	(GCAG)n	Simple_repeat	1	30	(0)	3295485
19	18.9	0.0	0.0	chr5	172006555	172006596	(9531663)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	3296455
454	24.1	2.5	0.0	chr5	172454825	172454940	(9083319)	+	MIR	SINE/MIR	36	154	(108)	3297475
550	11.1	0.0	0.0	chr5	172454946	172455026	(9083233)	C	L1MB3	LINE/L1	(273)	5910	5830	3297476
16	15.8	4.5	2.2	chr5	172683572	172683615	(8854644)	+	(GCC)n	Simple_repeat	1	46	(0)	3297973
13	17.2	3.9	5.7	chr5	172983718	172983768	(8554491)	+	G-rich	Low_complexity	1	53	(0)	3298674
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
13	29.6	1.8	1.8	chr5	173328637	173328695	(8209564)	+	(TGCG)n	Simple_repeat	1	59	(0)	3299413
23	21.0	0.0	0.0	chr5	173888379	173888454	(7649805)	+	(GGC)n	Simple_repeat	1	76	(0)	3300519
21	20.7	0.7	8.0	chr5	175478417	175478508	(6059751)	+	G-rich	Low_complexity	1	85	(0)	3303490
251	26.2	3.2	4.1	chr5	176364988	176365108	(5173151)	+	MIR1_Amn	SINE/MIR	3	121	(87)	3305104
316	26.5	3.0	1.0	chr5	176365122	176365220	(5173039)	+	MIR	SINE/MIR	35	135	(127)	3305105
12	15.7	2.6	5.0	chr5	176388390	176388428	(5149831)	+	(CCCGGCC)n	Simple_repeat	1	40	(0)	3305144
394	30.7	12.0	2.8	chr5	176538222	176538432	(4999827)	C	MIRb	SINE/MIR	(30)	238	6	3305484
13	25.5	5.5	2.6	chr5	176543293	176543365	(4994894)	+	(GCGGC)n	Simple_repeat	1	77	(0)	3305496
214	36.7	0.0	0.0	chr5	176543771	176543849	(4994410)	+	MIRb	SINE/MIR	117	195	(73)	3305497
186	29.7	0.6	0.0	chr5	176588187	176588725	(4949534)	+	(TG)n	Simple_repeat	1	542	(0)	3305613
454	26.8	5.8	2.7	chr5	176588772	176588955	(4949304)	+	MamRep1879	DNA/hAT-Tip100?	13	202	(14)	3305614
308	35.9	1.9	0.0	chr5	176739324	176739426	(4798833)	+	MIR3	SINE/MIR	33	137	(71)	3305902
17	18.2	0.0	0.0	chr5	176740045	176740075	(4798184)	+	A-rich	Low_complexity	1	31	(0)	3305903
212	22.9	4.7	0.0	chr5	176744320	176744380	(4793879)	C	MIRb	SINE/MIR	(35)	233	170	3305908
49	0.0	0.0	0.0	chr5	176745757	176745798	(4792461)	+	(GT)n	Simple_repeat	1	42	(0)	3305911
241	15.6	4.2	4.3	chr5	176830367	176830988	(4707271)	+	(TG)n	Simple_repeat	1	648	(0)	3306075
205	28.4	5.1	1.3	chr5	176943639	176943713	(4594546)	C	MIRb	SINE/MIR	(2)	266	189	3306259
305	32.0	9.5	3.4	chr5	176943769	176943946	(4594313)	C	MIRb	SINE/MIR	(46)	222	33	3306260
1894	14.2	2.0	0.3	chr5	177117366	177117654	(4420605)	+	AluJb	SINE/Alu	2	295	(17)	3306699
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
17	13.5	0.0	0.0	chr5	177497383	177497415	(4040844)	+	(GGCGGG)n	Simple_repeat	1	33	(0)	3307530
599	31.1	0.6	2.7	chr5	178115034	178115218	(3423041)	+	MIRc	SINE/MIR	81	261	(7)	3308589
16	19.2	0.0	4.4	chr5	178153596	178153640	(3384619)	+	(CACC)n	Simple_repeat	1	45	(0)	3308661
183	22.5	2.4	0.0	chr5	178555727	178555766	(2982493)	C	MIRc	SINE/MIR	(193)	75	35	3309393
253	30.5	3.5	0.0	chr5	178556059	178556140	(2982119)	+	L1ME4b	LINE/L1	451	535	(357)	3309394
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
2004	11.9	1.1	1.1	chr5	178895422	178895706	(2642553)	C	AluSq2	SINE/Alu	(16)	297	13	3310020
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
5052	15.4	2.7	0.4	chr5	179059219	179060061	(2478198)	+	L1MA4A	LINE/L1	5436	6298	(5)	3310303
13	27.1	0.0	0.0	chr5	179313770	179313809	(2224450)	+	(ACAC)n	Simple_repeat	1	40	(0)	3310636
15	28.4	0.0	0.0	chr5	179313856	179313894	(2224365)	+	(AC)n	Simple_repeat	1	39	(0)	3310637
16	27.6	0.0	0.0	chr5	179313942	179313981	(2224278)	+	(AC)n	Simple_repeat	1	40	(0)	3310637
1521	16.2	5.0	0.3	chr5	179530910	179531249	(2007010)	+	Charlie5	DNA/hAT-Charlie	2265	2621	(3)	3311005
547	23.2	0.8	0.8	chr5	179698083	179698208	(1840051)	+	MamRep4096	DNA/hAT-Tip100	1	126	(300)	3311402
12	16.5	0.0	0.0	chr5	179795688	179795714	(1742545)	+	(GGCGG)n	Simple_repeat	1	27	(0)	3311603
15	12.4	1.9	9.3	chr5	179796027	179796079	(1742180)	+	G-rich	Low_complexity	1	54	(0)	3311604
13	20.7	3.6	5.2	chr5	180071333	180071388	(1466871)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	3312025
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
185	29.9	0.7	0.2	chr5	180594793	180595346	(942913)	+	(GT)n	Simple_repeat	1	558	(0)	3312963
282	27.3	0.0	2.5	chr5	180595351	180595429	(942830)	C	MLT1D	LTR/ERVL-MaLR	(311)	194	118	3312962
834	10.4	0.0	0.0	chr5	180831416	180831530	(706729)	C	AluSq2	SINE/Alu	(17)	296	182	3313312
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
648	0.0	0.0	0.0	chr5	181188854	181188925	(349334)	C	tRNA-Pro-CCA	tRNA	(3)	72	1	3313825
15	17.7	2.6	0.0	chr5	181204374	181204411	(333848)	+	G-rich	Low_complexity	1	39	(0)	3313845
11	20.7	0.0	2.9	chr5	181204719	181204753	(333506)	+	(CCGCAG)n	Simple_repeat	1	35	(0)	3313846
11	25.1	0.0	4.3	chr5	181205341	181205386	(332873)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	3313847
197	17.1	0.0	0.0	chr5	181217791	181217825	(320434)	+	MIR	SINE/MIR	105	139	(123)	3313880
660	0.0	0.0	0.0	chr5	181222394	181222467	(315792)	C	tRNA-Val-GTG	tRNA	(2)	74	1	3313890
3900	16.1	10.5	9.8	chr5	181279892	181281569	(256690)	+	REP522	Satellite/telo	1	1690	(1255)	3313977
1173	24.2	4.2	7.9	chr5	181281873	181282793	(255466)	+	REP522	Satellite/telo	1	886	(2)	3313978
3505	14.2	6.7	0.5	chr6	639756	640358	(170165621)	C	LTR48B	LTR/ERV1	(1)	643	1	3315042
1519	21.2	2.2	4.6	chr6	1524332	1524697	(169281282)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	1	3316257
424	29.9	6.8	1.7	chr6	2848664	2848843	(167957136)	+	MIRb	SINE/MIR	22	211	(57)	3318001
16042	12.1	1.7	3.1	chr6	2876871	2882853	(167923126)	+	L1PBa1	LINE/L1	253	6066	(793)	3318050
12	10.3	6.1	2.9	chr6	2903423	2903455	(167902524)	+	(GGTCAG)n	Simple_repeat	1	35	(0)	3318087
388	23.5	13.2	0.8	chr6	2932336	2932468	(167873511)	C	LTR41C	LTR/ERVL	(549)	152	1	3318122
5462	24.1	11.3	5.8	chr6	2932476	2932972	(167873007)	+	BLACKJACK	DNA/hAT-Blackjack	229	733	(2236)	3318123
190	19.4	7.7	11.1	chr6	2952809	2952889	(167853090)	C	MamRTE1	LINE/RTE-BovB	(1252)	2560	2483	3318154
26	22.4	3.7	4.5	chr6	3053779	3053885	(167752094)	+	(CGCCA)n	Simple_repeat	1	111	(0)	3318323
2237	8.8	3.6	0.3	chr6	3053985	3054278	(167751701)	+	AluSx1	SINE/Alu	1	304	(8)	3318324
15	23.0	2.9	8.6	chr6	3118584	3118685	(167687294)	+	(GGCGG)n	Simple_repeat	1	105	(0)	3318430
13	14.6	0.0	3.1	chr6	3163053	3163084	(167642895)	+	(CGCGG)n	Simple_repeat	1	32	(0)	3318496
4679	14.8	4.5	1.3	chr6	3164849	3165681	(167640298)	C	MER21B	LTR/ERVL	(7)	861	1	3318502
13	21.5	3.4	4.9	chr6	3228858	3228916	(167577063)	+	(GCACGC)n	Simple_repeat	1	61	(0)	3318606
16	0.0	0.0	0.0	chr6	3229004	3229021	(167576958)	+	(GT)n	Simple_repeat	1	18	(0)	3318607
32	3.2	0.0	0.0	chr6	3229022	3229053	(167576926)	+	(GA)n	Simple_repeat	1	32	(0)	3318608
11	26.8	3.6	1.8	chr6	3751244	3751298	(167054681)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3319353
13	13.2	0.0	0.0	chr6	3751561	3751585	(167054394)	+	(CCCG)n	Simple_repeat	1	25	(0)	3319354
392	35.2	12.8	3.1	chr6	4503138	4503753	(166302226)	C	Plat_L3	LINE/CR1	(148)	3438	2754	3320552
911	20.0	0.6	0.0	chr6	4503939	4504103	(166301876)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	3320553
12	5.6	0.0	0.0	chr6	5085782	5085800	(165720179)	+	(GCA)n	Simple_repeat	1	19	(0)	3321506
724	22.9	14.7	2.1	chr6	5412121	5412445	(165393534)	+	LTR16A	LTR/ERVL	1	373	(78)	3321997
37	0.0	0.0	0.0	chr6	6007567	6007598	(164798381)	+	(CA)n	Simple_repeat	1	32	(0)	3322876
23	28.7	3.8	0.0	chr6	6007601	6007680	(164798299)	+	(CG)n	Simple_repeat	1	83	(0)	3322877
26	0.0	3.0	2.9	chr6	7108317	7108349	(163697630)	+	(TCC)n	Simple_repeat	1	34	(0)	3324625
17	14.2	3.9	5.6	chr6	7141196	7141249	(163664730)	+	G-rich	Low_complexity	1	53	(0)	3324672
2323	10.6	0.0	0.0	chr6	7590696	7590996	(163214983)	+	AluJb	SINE/Alu	1	301	(11)	3325413
17	15.6	0.0	2.6	chr6	10404466	10404503	(160401476)	+	G-rich	Low_complexity	1	38	(0)	3329445
21	24.4	0.0	0.0	chr6	10420203	10420250	(160385729)	+	(AC)n	Simple_repeat	1	48	(0)	3329454
171	32.6	0.5	0.0	chr6	11319316	11319892	(159486087)	+	(CACACA)n	Simple_repeat	1	580	(0)	3331059
54	24.2	5.8	1.8	chr6	12749435	12749641	(158056338)	+	(CTCTCC)n	Simple_repeat	1	219	(0)	3333136
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
566	28.5	6.2	1.0	chr6	13488014	13488242	(157317737)	C	MIRb	SINE/MIR	(0)	262	14	3334350
433	24.2	0.0	5.7	chr6	13488676	13488780	(157317199)	+	L2a	LINE/L2	3328	3426	(0)	3334351
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
377	27.6	10.0	3.6	chr6	14017618	14017839	(156788140)	+	L2a	LINE/L2	3146	3426	(0)	3335307
7421	11.3	20.1	1.5	chr6	14017843	14019123	(156786856)	+	LTR12C	LTR/ERV1	1	1579	(0)	3335308
469	16.5	12.7	0.0	chr6	14640440	14640542	(156165437)	+	MER96	DNA/hAT-Tip100	50	167	(8)	3336315
321	35.8	7.0	0.6	chr6	14922772	14922945	(155883034)	+	MIR3	SINE/MIR	7	192	(16)	3336775
1861	15.2	1.4	0.3	chr6	15038003	15038292	(155767687)	C	AluJb	SINE/Alu	(8)	304	12	3337068
283	32.9	7.3	4.4	chr6	15038441	15038599	(155767380)	C	MIRb	SINE/MIR	(47)	221	58	3337069
251	24.0	1.3	2.6	chr6	15382556	15382632	(155423347)	C	MIR3	SINE/MIR	(7)	201	126	3337875
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
20	20.5	0.0	0.0	chr6	16759989	16760033	(154045946)	+	(CACA)n	Simple_repeat	1	45	(0)	3340012
18	23.3	0.0	0.0	chr6	16760221	16760273	(154045706)	+	(CCT)n	Simple_repeat	1	53	(0)	3340013
1701	7.7	2.7	1.4	chr6	17200187	17200445	(153605534)	C	AluSx1	SINE/Alu	(0)	312	58	3340711
5881	12.9	11.6	14.7	chr6	17200446	17201745	(153604234)	+	LTR12D	LTR/ERV1	1	1254	(0)	3340712
18	12.8	0.0	0.0	chr6	18122654	18122687	(152683292)	+	(ACGGTC)n	Simple_repeat	1	34	(0)	3342482
248	28.3	5.0	0.0	chr6	18122833	18122963	(152683016)	C	MIRc	SINE/MIR	(78)	190	45	3342483
18	28.7	1.1	5.3	chr6	18264204	18264298	(152541681)	+	(CGCC)n	Simple_repeat	1	90	(0)	3342728
29	0.0	6.2	0.0	chr6	19692030	19692061	(151113918)	+	(GT)n	Simple_repeat	1	34	(0)	3344779
181	25.0	0.0	0.0	chr6	21586935	21586978	(149219001)	+	L2b	LINE/L2	3328	3371	(4)	3347908
33	0.0	0.0	0.0	chr6	21588965	21588995	(149216984)	+	(T)n	Simple_repeat	1	31	(0)	3347909
30	26.5	1.1	1.1	chr6	21595008	21595099	(149210880)	+	(CGG)n	Simple_repeat	1	93	(0)	3347916
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
56	0.0	0.0	0.0	chr6	24645841	24645888	(146160091)	+	(AC)n	Simple_repeat	1	48	(0)	3352298
15	20.5	0.0	2.4	chr6	25652156	25652196	(145153783)	+	G-rich	Low_complexity	1	41	(0)	3353909
15	17.4	2.9	2.8	chr6	25652737	25652771	(145153208)	+	(AT)n	Simple_repeat	1	36	(0)	3353910
33	0.0	0.0	0.0	chr6	25882463	25882490	(144923489)	+	(AC)n	Simple_repeat	1	28	(0)	3354243
185	33.9	9.2	3.3	chr6	25882622	25882743	(144923236)	C	OldhAT1	DNA/hAT-Ac	(623)	2225	2096	3354244
381	19.7	6.6	4.5	chr6	25882744	25882876	(144923103)	+	LTR102_Mam	LTR/ERVL	1	136	(715)	3354245
465	21.7	4.8	0.0	chr6	25898937	25899056	(144906923)	+	L2a	LINE/L2	3190	3315	(111)	3354267
35	0.0	0.0	0.0	chr6	25899202	25899231	(144906748)	+	(CA)n	Simple_repeat	1	30	(0)	3354268
448	32.6	6.0	1.7	chr6	25899318	25899604	(144906375)	C	ERVL-E-int	LTR/ERVL	(448)	5219	4920	3354269
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
14	13.2	2.9	2.8	chr6	26156401	26156435	(144649544)	+	(CTGCCC)n	Simple_repeat	1	36	(0)	3354734
12	19.7	2.3	4.4	chr6	26501645	26501688	(144304291)	+	(CGCCGAG)n	Simple_repeat	1	45	(0)	3355355
665	0.0	0.0	0.0	chr6	26556546	26556619	(144249360)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	3355461
548	0.0	0.0	21.3	chr6	27020346	27020439	(143785540)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3356155
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
237	25.4	0.0	0.0	chr6	27252310	27252368	(143553611)	+	L2a	LINE/L2	3367	3425	(1)	3356578
582	6.9	0.0	0.0	chr6	27295433	27295504	(143510475)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	3356668
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
788	0.0	0.0	0.0	chr6	27503039	27503120	(143302859)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3357006
676	0.0	0.0	0.0	chr6	27503744	27503815	(143302164)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	3357007
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
2177	9.6	0.4	0.0	chr6	27693488	27693795	(143112184)	C	AluSx3	SINE/Alu	(0)	311	1	3357390
299	17.9	3.5	5.6	chr6	27693796	27693884	(143112095)	+	L1MC5	LINE/L1	9196	9282	(22)	3357391
2113	10.9	1.4	0.3	chr6	27839215	27839507	(142966472)	+	AluSq2	SINE/Alu	13	308	(5)	3357681
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
260	28.0	6.7	2.3	chr6	28224901	28225028	(142580951)	+	HAL1ME	LINE/L1	2324	2457	(8)	3358287
410	28.1	0.8	1.5	chr6	28225034	28225163	(142580816)	+	Charlie13a	DNA/hAT-Charlie	1376	1504	(10)	3358288
206	33.9	0.0	0.0	chr6	28281276	28281337	(142524642)	+	L2a	LINE/L2	3245	3306	(81)	3358393
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
217	29.1	12.1	2.6	chr6	28587715	28587857	(142218122)	C	MIR1_Amn	SINE/MIR	(21)	187	32	3358865
10151	11.8	4.0	0.2	chr6	28865488	28867004	(141938975)	C	LTR12C	LTR/ERV1	(0)	1579	3	3359357
2941	19.0	13.0	5.8	chr6	28867005	28867449	(141938530)	C	MER6	DNA/TcMar-Tigger	(393)	472	1	3359356
2564	4.0	1.0	0.3	chr6	28895821	28896121	(141909858)	C	AluY	SINE/Alu	(6)	305	3	3359410
857	15.7	2.5	1.9	chr6	30171502	30171663	(140634316)	C	MER5A1	DNA/hAT-Charlie	(1)	165	3	3361190
214	30.8	0.0	0.0	chr6	30213982	30214046	(140591933)	C	MIRc	SINE/MIR	(114)	154	90	3361269
19	14.4	0.0	0.0	chr6	30571118	30571148	(140234831)	+	(A)n	Simple_repeat	1	31	(0)	3361824
1405	13.4	0.8	8.6	chr6	30721887	30722155	(140083824)	+	AluJr	SINE/Alu	40	287	(25)	3362084
917	14.3	18.8	0.4	chr6	30725538	30725762	(140080217)	+	MER2	DNA/TcMar-Tigger	37	312	(33)	3362087
391	24.4	4.7	0.0	chr6	30725854	30725935	(140080044)	C	AluJb	SINE/Alu	(79)	233	148	3362088
4205	12.2	4.2	0.2	chr6	30845021	30845634	(139960345)	C	LTR9B	LTR/ERV1	(0)	644	5	3362367
1776	14.2	0.8	1.1	chr6	30845639	30845905	(139960074)	C	AluSx1	SINE/Alu	(46)	266	1	3362368
14	20.0	2.4	2.3	chr6	31403922	31403963	(139402016)	+	(CTC)n	Simple_repeat	1	43	(0)	3363284
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
12	16.8	3.7	7.1	chr6	31806831	31806884	(138999095)	+	(AGCGCG)n	Simple_repeat	1	56	(0)	3363932
13	13.6	10.0	1.8	chr6	33117372	33117421	(137688558)	+	(GGAGGAT)n	Simple_repeat	1	55	(0)	3365861
4275	9.9	4.1	0.0	chr6	33117739	33118377	(137687602)	C	LTR9C	LTR/ERV1	(0)	666	1	3365862
25	20.6	0.0	3.1	chr6	33200310	33200374	(137605605)	+	(CCG)n	Simple_repeat	1	65	(0)	3365969
356	30.6	10.5	5.3	chr6	33299810	33300131	(137505848)	C	L2b	LINE/L2	(7)	3380	3080	3366146
18	12.2	0.0	0.0	chr6	33813095	33813121	(136992858)	+	(G)n	Simple_repeat	1	27	(0)	3367155
13	22.9	0.0	5.9	chr6	34130076	34130126	(136675853)	+	(TCCC)n	Simple_repeat	1	51	(0)	3367687
270	24.2	0.0	0.0	chr6	34146221	34146282	(136659697)	C	MIR3	SINE/MIR	(66)	142	81	3367714
12	13.7	0.0	0.0	chr6	34696759	34696782	(136109197)	+	(ACTC)n	Simple_repeat	1	24	(0)	3368935
17	39.7	0.0	0.0	chr6	34696784	34696874	(136109105)	+	(CCC)n	Simple_repeat	1	91	(0)	3368936
17	0.0	7.4	0.0	chr6	34757806	34757832	(136048147)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3369130
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
965	23.3	13.2	12.0	chr6	35739758	35740123	(135065856)	C	MER21C	LTR/ERVL	(445)	493	123	3371035
15	26.1	0.0	1.9	chr6	35805334	35805385	(135000594)	+	(GGAGCCG)n	Simple_repeat	1	52	(0)	3371201
12	9.7	5.4	5.1	chr6	36839950	36839986	(133965993)	+	(GGCTCCG)n	Simple_repeat	1	39	(0)	3373406
26	18.9	0.0	0.0	chr6	36840090	36840138	(133965841)	+	(GT)n	Simple_repeat	1	49	(0)	3373407
450	22.0	2.8	1.6	chr6	37051906	37052035	(133753944)	+	MIRc	SINE/MIR	30	157	(111)	3373818
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
793	22.5	12.4	1.4	chr6	37491726	37491946	(133314033)	C	MIR	SINE/MIR	(9)	253	5	3374752
464	35.8	3.4	1.1	chr6	37492053	37492227	(133313752)	C	MIRb	SINE/MIR	(87)	181	3	3374753
14	25.3	2.0	2.0	chr6	37649091	37649139	(133156840)	+	(CGG)n	Simple_repeat	1	50	(0)	3375062
929	23.6	5.6	0.0	chr6	37649557	37649776	(133156203)	+	MIR	SINE/MIR	2	234	(28)	3375063
126	6.5	5.1	0.0	chr6	37698157	37698352	(133107627)	+	(TC)n	Simple_repeat	1	206	(0)	3375153
16	0.0	0.0	0.0	chr6	38703318	38703334	(132102645)	+	(A)n	Simple_repeat	1	17	(0)	3376822
12	25.3	2.4	0.0	chr6	39229797	39229838	(131576141)	+	(TTTATT)n	Simple_repeat	1	43	(0)	3377684
274	34.0	0.4	0.1	chr6	40350154	40351126	(130454853)	+	(CA)n	Simple_repeat	1	977	(0)	3379324
2390	8.3	0.0	1.0	chr6	40351168	40351469	(130454510)	+	AluSc	SINE/Alu	1	299	(10)	3379325
43	2.5	0.0	0.0	chr6	40587494	40587534	(130218445)	+	(CA)n	Simple_repeat	1	41	(0)	3379733
22	9.7	0.0	2.9	chr6	41372293	41372327	(129433652)	+	(AC)n	Simple_repeat	1	35	(0)	3381024
434	19.8	0.9	0.9	chr6	41372383	41372489	(129433490)	C	UCON88	Unknown	(5)	107	1	3381025
16	21.8	4.3	4.2	chr6	41406921	41406989	(129398990)	+	(GGCGC)n	Simple_repeat	1	72	(0)	3381087
13	11.7	4.9	4.7	chr6	41443311	41443351	(129362628)	+	(CGCCGCCT)n	Simple_repeat	1	43	(0)	3381166
20	21.2	2.8	4.1	chr6	41443482	41443552	(129362427)	+	G-rich	Low_complexity	1	73	(0)	3381167
226	30.4	18.7	1.7	chr6	41964806	41965039	(128840940)	C	L2	LINE/L2	(668)	2751	2469	3382195
405	31.1	11.1	2.2	chr6	42177208	42177388	(128628591)	+	MIRb	SINE/MIR	70	268	(0)	3382719
310	31.9	4.3	0.1	chr6	42177381	42177491	(128628488)	C	MIRb	SINE/MIR	(58)	204	88	3382720
19	14.0	0.0	2.4	chr6	42453070	42453110	(128352869)	+	G-rich	Low_complexity	1	41	(0)	3383279
29	0.0	0.0	0.0	chr6	42929620	42929646	(127876333)	+	(TGC)n	Simple_repeat	1	27	(0)	3384362
12	11.5	3.3	3.2	chr6	43076534	43076563	(127729416)	+	(CTG)n	Simple_repeat	1	31	(0)	3384639
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
12	18.8	2.6	2.6	chr6	43575960	43575997	(127229982)	+	(GCGGCGG)n	Simple_repeat	1	39	(0)	3385604
19	16.6	4.3	0.0	chr6	43576024	43576070	(127229909)	+	(GCCCGC)n	Simple_repeat	1	49	(0)	3385605
47	4.2	0.0	0.0	chr6	43702713	43702761	(127103218)	+	(TG)n	Simple_repeat	1	49	(0)	3385855
13	23.2	2.4	0.0	chr6	43771190	43771230	(127034749)	+	(AGCCGG)n	Simple_repeat	1	42	(0)	3385991
16	14.8	0.0	4.9	chr6	44002458	44002498	(126803481)	+	(CCCCG)n	Simple_repeat	1	41	(0)	3386394
30	0.0	0.0	0.0	chr6	44002767	44002794	(126803185)	+	(GCG)n	Simple_repeat	1	28	(0)	3386395
234	24.1	0.0	3.3	chr6	44202995	44203054	(126602925)	C	MIR3	SINE/MIR	(66)	142	85	3386762
21	12.3	4.5	0.0	chr6	44219787	44219830	(126586149)	+	G-rich	Low_complexity	1	46	(0)	3386808
12	16.4	5.9	0.0	chr6	44246276	44246309	(126559670)	+	(CATCC)n	Simple_repeat	1	36	(0)	3386851
17	11.7	2.6	2.5	chr6	44297771	44297810	(126508169)	+	(CGCTGC)n	Simple_repeat	1	40	(0)	3386924
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
13	13.3	6.1	0.0	chr6	46735340	46735372	(124070607)	+	(GGCG)n	Simple_repeat	1	35	(0)	3390629
418	30.8	18.2	0.0	chr6	52724765	52725105	(118080874)	+	L2c	LINE/L2	1844	2260	(1159)	3399005
2085	21.2	5.8	0.0	chr6	52725116	52725521	(118080458)	+	MLT1F1	LTR/ERVL-MaLR	139	569	(0)	3399006
14	23.1	2.1	2.1	chr6	53348858	53348904	(117457075)	+	(GGC)n	Simple_repeat	1	48	(0)	3400038
13	20.1	1.7	8.2	chr6	63572479	63572538	(107233441)	+	(CGGCT)n	Simple_repeat	1	61	(0)	3410802
34	24.6	2.0	1.0	chr6	63572569	63572666	(107233313)	+	(GCC)n	Simple_repeat	1	100	(0)	3410803
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
17	18.6	0.0	0.0	chr6	70956192	70956228	(99849751)	+	(GCGGCT)n	Simple_repeat	1	37	(0)	3419938
17471	5.8	0.3	0.0	chr6	73310508	73312783	(97493196)	C	L1PA5	LINE/L1	(1805)	4341	2075	3423115
812	13.8	0.8	0.0	chr6	73452448	73452563	(97353416)	+	AluJo	SINE/Alu	1	117	(195)	3423470
2267	7.8	0.3	1.7	chr6	73452598	73452893	(97353086)	+	AluSx1	SINE/Alu	3	294	(18)	3423471
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
21	20.9	1.6	3.1	chr6	79537106	79537169	(91268810)	+	(CCACCT)n	Simple_repeat	1	65	(0)	3431371
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
350	24.2	0.1	0.0	chr6	85679445	85679519	(85126460)	C	MIRc	SINE/MIR	(53)	155	81	3439431
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
20	28.5	2.6	1.2	chr6	87701510	87701587	(83104392)	+	(GCG)n	Simple_repeat	1	80	(0)	3442026
17	19.1	7.2	2.7	chr6	88166294	88166362	(82639617)	+	(TCGCTC)n	Simple_repeat	1	74	(0)	3442790
19	16.7	0.0	2.4	chr6	88166571	88166612	(82639367)	+	(CCT)n	Simple_repeat	1	42	(0)	3442791
16	21.3	2.3	0.0	chr6	89118080	89118123	(81687856)	+	G-rich	Low_complexity	1	45	(0)	3444211
24	13.5	0.0	0.0	chr6	89411922	89411962	(81394017)	+	(CTC)n	Simple_repeat	1	41	(0)	3444714
2213	7.7	1.0	1.7	chr6	89820075	89820374	(80985605)	+	AluSz	SINE/Alu	1	298	(14)	3445427
35	0.0	0.0	0.0	chr6	90295655	90295684	(80510295)	+	(GT)n	Simple_repeat	1	30	(0)	3446168
20	26.0	3.1	6.7	chr6	96015836	96015965	(74790014)	+	(CCTCC)n	Simple_repeat	1	134	(0)	3453177
13	21.2	2.1	4.2	chr6	96016125	96016171	(74789808)	+	(CGC)n	Simple_repeat	1	48	(0)	3453178
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
2511	8.0	0.6	1.0	chr6	99569110	99569421	(71236558)	C	AluSx3	SINE/Alu	(0)	311	1	3457867
13	17.0	4.3	8.2	chr6	99613614	99613683	(71192296)	+	G-rich	Low_complexity	1	73	(0)	3457940
20	12.4	0.0	0.0	chr6	99613689	99613723	(71192256)	+	(CAC)n	Simple_repeat	1	35	(0)	3457941
16	0.0	0.0	0.0	chr6	99613749	99613768	(71192211)	+	(CCG)n	Simple_repeat	1	20	(0)	3457942
15	16.9	0.0	2.9	chr6	100881024	100881058	(69924921)	+	(CCT)n	Simple_repeat	1	35	(0)	3459592
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
15	24.7	1.4	5.7	chr6	107491266	107491334	(63314645)	+	(CCGCCT)n	Simple_repeat	1	70	(0)	3468958
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
30	23.1	0.0	0.0	chr6	108781855	108781917	(62024062)	+	(CA)n	Simple_repeat	1	63	(0)	3471142
15	18.9	7.8	2.9	chr6	109382076	109382139	(61423840)	+	(CCGC)n	Simple_repeat	1	69	(0)	3472067
14	19.5	0.0	2.7	chr6	109441043	109441079	(61364900)	+	(CGC)n	Simple_repeat	1	37	(0)	3472169
218	11.8	0.0	0.0	chr6	109690265	109690298	(61115681)	+	L2b	LINE/L2	3338	3371	(4)	3472532
260	18.8	5.5	0.0	chr6	109690606	109690674	(61115305)	+	Arthur1B	DNA/hAT-Tip100	1078	1150	(75)	3472533
19	8.3	0.0	0.0	chr6	109944517	109944542	(60861437)	+	(TG)n	Simple_repeat	1	26	(0)	3472903
13	10.0	0.0	0.0	chr6	110875023	110875044	(59930935)	+	(GCG)n	Simple_repeat	1	22	(0)	3474524
2499	6.5	0.0	0.3	chr6	110981555	110981863	(59824116)	C	AluSx1	SINE/Alu	(4)	308	1	3474772
12	16.9	2.9	2.8	chr6	111873420	111873454	(58932525)	+	(GCT)n	Simple_repeat	1	36	(0)	3476294
205	32.8	0.0	5.9	chr6	113563378	113563445	(57242534)	C	L2c	LINE/L2	(38)	3349	3286	3478663
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
19	21.9	4.6	1.5	chr6	114343048	114343112	(56462867)	+	(CTC)n	Simple_repeat	1	68	(0)	3479983
16	31.6	4.7	0.0	chr6	114343113	114343126	(56462853)	+	(CTCCCG)n	Simple_repeat	26	90	(0)	3479982
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
258	26.2	20.4	6.5	chr6	116765801	116765984	(54039995)	C	L3	LINE/CR1	(104)	3995	3780	3483066
39	4.6	0.0	0.0	chr6	117907178	117907222	(52898757)	+	(GCC)n	Simple_repeat	1	45	(0)	3484466
15	0.0	4.0	3.9	chr6	117907478	117907502	(52898477)	+	(CGG)n	Simple_repeat	1	26	(0)	3484467
24	14.2	0.0	0.0	chr6	117952165	117952203	(52853776)	+	(TG)n	Simple_repeat	1	39	(0)	3484529
21	22.8	1.4	4.1	chr6	118935172	118935243	(51870736)	+	G-rich	Low_complexity	1	73	(0)	3485880
937	25.6	10.8	4.9	chr6	121620024	121620372	(49185607)	C	MamTip3	DNA/hAT-Tip100	(70)	430	59	3489343
3329	6.8	0.7	0.7	chr6	121620422	121620869	(49185110)	C	LTR7	LTR/ERV1	(2)	448	1	3489344
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
427	23.6	11.5	4.7	chr6	124759470	124759588	(46046391)	+	L2a	LINE/L2	3067	3180	(246)	3493376
80	0.0	0.0	0.0	chr6	124759589	124759656	(46046323)	+	(AC)n	Simple_repeat	1	68	(0)	3493377
427	23.6	11.5	4.7	chr6	124759657	124759705	(46046274)	+	L2a	LINE/L2	3181	3248	(178)	3493376
599	18.3	0.0	0.0	chr6	124759712	124759815	(46046164)	+	MSTD	LTR/ERVL-MaLR	1	104	(292)	3493378
18	22.1	0.0	0.0	chr6	124961901	124961943	(45844036)	+	(GTGC)n	Simple_repeat	1	43	(0)	3493631
29	0.0	0.0	0.0	chr6	125301483	125301507	(45504472)	+	(CA)n	Simple_repeat	1	25	(0)	3494127
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
13	13.2	6.7	4.2	chr6	125956943	125956987	(44848992)	+	(GAGGCGC)n	Simple_repeat	1	48	(0)	3495078
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
200	30.4	1.4	0.0	chr6	128882871	128882939	(41923040)	C	MIRc	SINE/MIR	(6)	262	193	3498754
16	11.3	4.8	4.5	chr6	128883311	128883352	(41922627)	+	(GCA)n	Simple_repeat	1	44	(0)	3498755
31	25.0	7.2	2.2	chr6	130019195	130019361	(40786618)	+	G-rich	Low_complexity	1	179	(0)	3500310
15	8.7	0.0	0.0	chr6	130019427	130019451	(40786528)	+	(GAGC)n	Simple_repeat	1	25	(0)	3500311
16	14.5	0.0	0.0	chr6	130019614	130019644	(40786335)	+	(CACA)n	Simple_repeat	1	31	(0)	3500312
18	11.6	0.0	4.9	chr6	130019645	130019652	(40786327)	+	(CGCACA)n	Simple_repeat	3	41	(0)	3500313
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
18	24.2	3.3	5.3	chr6	131135644	131135734	(39670245)	+	(CCGCCT)n	Simple_repeat	1	94	(0)	3501898
446	26.9	16.2	4.7	chr6	131901265	131901541	(38904438)	C	HAL1b	LINE/L1	(1578)	843	529	3503085
3466	5.4	0.0	1.3	chr6	131901550	131902003	(38903976)	+	LTR7	LTR/ERV1	1	448	(2)	3503086
2137	7.0	0.4	0.4	chr6	132813784	132814042	(37991937)	+	AluSq2	SINE/Alu	1	259	(54)	3504375
251	15.7	1.9	3.8	chr6	135271738	135271790	(35534189)	C	L2a	LINE/L2	(18)	3408	3357	3508238
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
38	15.6	4.1	2.9	chr6	138987868	138987965	(31818014)	+	(CGGCTG)n	Simple_repeat	1	102	(0)	3513898
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
201	19.6	6.7	5.1	chr6	141105935	141105993	(29699986)	+	L2	LINE/L2	2545	2604	(815)	3516854
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
19	16.3	0.0	0.0	chr6	143511562	143511597	(27294382)	+	(GCA)n	Simple_repeat	1	36	(0)	3519988
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
14	8.9	0.0	0.0	chr6	145964100	145964123	(24841856)	+	(CCTC)n	Simple_repeat	1	24	(0)	3523417
54	0.0	0.0	0.0	chr6	146028233	146028278	(24777701)	+	(GT)n	Simple_repeat	1	46	(0)	3523493
14	8.0	3.5	3.3	chr6	148747761	148747789	(22058190)	+	(CGC)n	Simple_repeat	1	30	(0)	3527385
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
13	9.7	5.7	2.7	chr6	149864264	149864298	(20941681)	+	(GCCCTGC)n	Simple_repeat	1	37	(0)	3529318
201	30.4	10.7	1.1	chr6	149963663	149963755	(20842224)	+	MIR1_Amn	SINE/MIR	84	186	(44)	3529448
17	16.3	0.0	0.0	chr6	150005252	150005286	(20800693)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3529502
13	29.8	1.1	6.7	chr6	150866984	150867072	(19938907)	+	(TCCT)n	Simple_repeat	1	90	(0)	3530876
707	18.2	12.3	0.0	chr6	151493541	151493683	(19312296)	C	MER45A	DNA/hAT-Tip100	(0)	178	16	3532103
520	24.7	4.6	9.2	chr6	155119765	155120014	(15685965)	C	MER112	DNA/hAT-Charlie	(14)	247	10	3537677
15	21.1	0.0	0.0	chr6	156176346	156176374	(14629605)	+	(CA)n	Simple_repeat	1	29	(0)	3539108
69	37.0	0.4	0.0	chr6	157221601	157221868	(13584111)	+	(CA)n	Simple_repeat	1	269	(0)	3540567
401	21.3	5.5	5.6	chr6	157531196	157531331	(13274648)	C	L2a	LINE/L2	(3)	3423	3245	3541064
244	29.6	5.2	7.1	chr6	157531421	157531727	(13274252)	+	L2a	LINE/L2	3088	3426	(0)	3541065
1114	22.6	14.1	4.2	chr6	157533148	157533677	(13272302)	C	L2a	LINE/L2	(1)	3425	2858	3541067
751	22.2	11.5	1.6	chr6	157533805	157534047	(13271932)	+	Kanga1b	DNA/TcMar-Tc2	507	776	(3)	3541068
2002	19.6	2.1	4.8	chr6	157552931	157553413	(13252566)	C	MER31A	LTR/ERV1	(10)	475	6	3541095
141	39.0	0.1	1.0	chr6	157630423	157631135	(13174844)	+	(AC)n	Simple_repeat	1	714	(0)	3541206
19	25.5	1.1	6.6	chr6	158644770	158644859	(12161120)	+	(GCCCC)n	Simple_repeat	1	91	(0)	3542863
104	25.1	6.1	2.2	chr6	158852933	158853360	(11952619)	+	(CA)n	Simple_repeat	1	454	(0)	3543240
15	17.5	2.0	5.8	chr6	160348644	160348694	(10457285)	+	(GCCCGCG)n	Simple_repeat	1	52	(0)	3545348
287	30.6	15.5	4.6	chr6	162542542	162542736	(8263243)	+	MIRb	SINE/MIR	4	223	(45)	3548325
559	36.0	9.5	1.7	chr6	162542851	162543265	(8262714)	C	L3	LINE/CR1	(101)	3998	3548	3548326
50	3.5	1.7	1.6	chr6	163396741	163396800	(7409179)	+	(TG)n	Simple_repeat	1	61	(0)	3549390
890	17.8	4.6	0.0	chr6	163397309	163397493	(7408486)	C	L1MB4	LINE/L1	(3)	6177	5984	3549391
12	17.7	5.0	2.4	chr6	163413489	163413528	(7392451)	+	(CGCC)n	Simple_repeat	1	42	(0)	3549418
15	4.8	0.0	0.0	chr6	165309246	165309267	(5496712)	+	(CCT)n	Simple_repeat	1	22	(0)	3551810
560	32.6	4.3	1.9	chr6	165793847	165794091	(5011888)	C	MIRb	SINE/MIR	(1)	261	10	3552394
178	29.8	0.2	1.6	chr6	165794114	165794678	(5011301)	+	(CA)n	Simple_repeat	1	566	(0)	3552395
264	25.8	9.2	0.0	chr6	165854359	165854486	(4951493)	C	LTR16E1	LTR/ERVL	(95)	443	303	3552464
236	28.5	3.8	2.3	chr6	166836601	166836770	(3969209)	C	L1ME3	LINE/L1	(1449)	2002	1881	3553689
311	34.0	10.9	2.3	chr6	166836775	166837216	(3968763)	C	L1ME3	LINE/L1	(5096)	1327	843	3553689
15	12.2	6.2	3.9	chr6	166862557	166862604	(3943375)	+	(TCCTCCC)n	Simple_repeat	1	51	(0)	3553712
2028	9.0	8.2	0.0	chr6	166954732	166955009	(3850970)	+	AluSx	SINE/Alu	1	303	(9)	3553811
146	15.4	0.0	0.8	chr6	166955176	166955426	(3850553)	+	(CACA)n	Simple_repeat	1	251	(0)	3553812
347	27.4	8.8	0.8	chr6	167678526	167678650	(3127329)	C	MIRb	SINE/MIR	(12)	256	121	3554649
17	15.4	5.6	3.5	chr6	168132085	168132138	(2673841)	+	(TGCC)n	Simple_repeat	1	57	(0)	3555176
260	21.5	8.4	0.0	chr6	168132374	168132438	(2673541)	+	L2a	LINE/L2	3339	3409	(17)	3555175
1307	30.6	13.4	5.2	chr6	168883498	168884610	(1921369)	+	Arthur1B	DNA/hAT-Tip100	3	1221	(4)	3555912
13	28.8	0.0	0.0	chr6	170306744	170306824	(499155)	+	(GCGGAG)n	Simple_repeat	1	81	(0)	3557312
374	20.6	9.3	0.0	chr7	84977	85073	(159260900)	C	Tigger7	DNA/TcMar-Tigger	(9)	2482	2376	3557946
116	32.8	0.5	1.4	chr7	85076	85505	(159260468)	+	(TG)n	Simple_repeat	1	432	(0)	3557947
12	26.4	2.2	0.0	chr7	332851	332895	(159013078)	+	(CGCCCG)n	Simple_repeat	1	46	(0)	3558213
573	23.3	11.3	0.0	chr7	380199	380370	(158965603)	C	MLT1C	LTR/ERVL-MaLR	(273)	194	1	3558266
128	37.1	0.7	0.7	chr7	583314	583859	(158762114)	+	(AC)n	Simple_repeat	1	550	(0)	3558539
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
2204	11.4	0.0	0.0	chr7	875748	876046	(158469927)	C	AluSx1	SINE/Alu	(13)	299	1	3559023
17	13.3	0.0	11.3	chr7	975609	975670	(158370303)	+	(GCCCC)n	Simple_repeat	1	62	(0)	3559144
20	37.6	0.0	0.0	chr7	1320768	1320839	(158025134)	+	(TG)n	Simple_repeat	1	72	(0)	3559686
257	22.7	5.8	0.8	chr7	1368764	1368876	(157977097)	C	MIRc	SINE/MIR	(118)	150	26	3559781
12	19.1	3.8	5.5	chr7	1725345	1725397	(157620576)	+	G-rich	Low_complexity	1	55	(0)	3560381
15	28.8	4.1	1.3	chr7	1725429	1725501	(157620472)	+	GA-rich	Low_complexity	1	76	(0)	3560382
4578	16.7	6.2	2.0	chr7	2825881	2826096	(156519877)	+	L1MC2	LINE/L1	5378	5611	(733)	3562068
304	23.7	4.2	6.6	chr7	2873494	2873615	(156472358)	+	MLT1H2	LTR/ERVL-MaLR	68	186	(303)	3562186
38	2.8	0.0	0.0	chr7	2887078	2887114	(156458859)	+	(CA)n	Simple_repeat	1	37	(0)	3562215
13	13.9	6.1	0.0	chr7	2887238	2887270	(156458703)	+	A-rich	Low_complexity	1	35	(0)	3562216
191	19.3	10.9	3.4	chr7	4792732	4792790	(154553183)	C	OldhAT1	DNA/hAT-Ac	(152)	2696	2633	3565554
1883	12.6	0.0	0.4	chr7	4945597	4945874	(154400099)	C	AluSz	SINE/Alu	(35)	277	1	3565876
15	22.1	6.2	2.9	chr7	4945875	4945890	(154400083)	+	(CTTTC)n	Simple_repeat	5	22	(0)	3565877
12	29.4	1.6	3.2	chr7	5513497	5513558	(153832415)	+	(GGTCGG)n	Simple_repeat	1	63	(0)	3567204
230	33.6	15.0	3.8	chr7	5513927	5514323	(153831650)	+	L2a	LINE/L2	2921	3426	(0)	3567205
185	36.2	3.2	0.0	chr7	5555490	5555576	(153790397)	C	MIRc	SINE/MIR	(116)	152	59	3567315
290	25.9	3.2	3.5	chr7	5555734	5555854	(153790119)	+	MIR3	SINE/MIR	63	185	(83)	3567327
2307	6.3	1.7	0.3	chr7	5563836	5564122	(153781851)	C	AluSp	SINE/Alu	(21)	292	2	3567346
1980	11.0	0.4	0.0	chr7	5633294	5633574	(153712399)	+	AluSz	SINE/Alu	1	282	(30)	3567504
29	0.0	0.0	0.0	chr7	5633575	5633602	(153712371)	+	(AAACA)n	Simple_repeat	1	28	(0)	3567505
16	25.8	1.3	5.2	chr7	5781370	5781445	(153564528)	+	(CCCTCGG)n	Simple_repeat	1	77	(0)	3567791
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
1421	16.9	1.0	10.8	chr7	6103773	6104072	(153241901)	+	AluJo	SINE/Alu	2	270	(42)	3568621
2539	4.2	0.3	2.6	chr7	6104073	6104380	(153241593)	C	AluSx3	SINE/Alu	(10)	301	1	3568622
1421	16.9	1.0	10.8	chr7	6104381	6104411	(153241562)	+	AluJo	SINE/Alu	271	300	(12)	3568621
12	18.4	5.4	0.0	chr7	6348780	6348816	(152997157)	+	(GCCGC)n	Simple_repeat	1	39	(0)	3569143
29	20.3	0.9	7.5	chr7	6503692	6503797	(152842176)	+	G-rich	Low_complexity	1	107	(0)	3569531
449	30.6	9.1	1.3	chr7	6541731	6541962	(152804011)	+	L1M5	LINE/L1	5542	5793	(331)	3569622
18	19.9	2.2	0.0	chr7	6730018	6730063	(152615910)	+	(GGCGGA)n	Simple_repeat	1	47	(0)	3570020
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
17	22.7	2.2	0.0	chr7	7969361	7969406	(151376567)	+	(CCT)n	Simple_repeat	1	47	(0)	3571875
3970	10.9	4.0	0.3	chr7	10908421	10909061	(148436912)	+	LTR9C	LTR/ERV1	1	666	(0)	3575489
49	0.0	0.0	0.0	chr7	14903213	14903254	(144442719)	+	(GT)n	Simple_repeat	1	42	(0)	3580580
13	21.9	2.3	2.2	chr7	16646094	16646137	(142699836)	+	G-rich	Low_complexity	1	45	(0)	3582782
32	3.0	0.0	0.0	chr7	16646203	16646236	(142699737)	+	(CTG)n	Simple_repeat	1	34	(0)	3582783
700	31.9	7.2	5.6	chr7	20219895	20220355	(139125618)	+	MLT1N2	LTR/ERVL-MaLR	93	561	(1)	3587458
11	21.2	6.8	0.0	chr7	20784367	20784410	(138561563)	+	(CGCTGT)n	Simple_repeat	1	47	(0)	3588256
22	12.6	2.2	2.2	chr7	20784401	20784445	(138561528)	+	(GCC)n	Simple_repeat	1	46	(0)	3588257
858	19.0	2.4	0.0	chr7	20798825	20798987	(138546986)	C	MER5A	DNA/hAT-Charlie	(22)	167	1	3588277
20	17.8	1.8	3.6	chr7	21427972	21428028	(137917945)	+	(CGCCC)n	Simple_repeat	1	56	(0)	3589265
810	21.3	4.4	0.0	chr7	22500451	22500624	(136845349)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	3590765
210	36.0	11.2	1.3	chr7	22822375	22822526	(136523447)	C	MIRc	SINE/MIR	(50)	218	50	3591270
305	26.8	3.5	0.0	chr7	23299733	23299814	(136046159)	C	MIR3	SINE/MIR	(22)	186	102	3592091
12	13.0	0.0	9.8	chr7	23471439	23471479	(135874494)	+	G-rich	Low_complexity	1	41	(0)	3592402
13	24.9	4.6	2.9	chr7	23474085	23474149	(135871824)	+	(GCCGC)n	Simple_repeat	1	68	(0)	3592403
47	0.0	0.0	0.0	chr7	25856999	25857038	(133488935)	+	(AC)n	Simple_repeat	1	40	(0)	3596026
14	9.1	0.0	0.0	chr7	25857039	25857062	(133488911)	+	(GCAC)n	Simple_repeat	1	24	(0)	3596027
55	0.0	0.0	0.0	chr7	26377019	26377065	(132968908)	+	(TG)n	Simple_repeat	1	47	(0)	3596951
240	29.2	4.2	3.4	chr7	28291878	28291994	(131053979)	C	L2	LINE/L2	(892)	2527	2410	3599838
130	20.0	0.0	0.0	chr7	28560798	28561044	(130784929)	+	(GTGT)n	Simple_repeat	1	247	(0)	3600248
263	29.5	14.1	0.0	chr7	28561190	28561311	(130784662)	C	L2b	LINE/L2	(4)	3371	3230	3600246
12	29.4	0.0	2.1	chr7	29189667	29189714	(130156259)	+	(CTCTCC)n	Simple_repeat	1	48	(0)	3601202
23	34.1	0.0	1.1	chr7	30135942	30135958	(129210015)	+	(ACGCAC)n	Simple_repeat	1	57	(38)	3602685
26	27.8	0.0	0.0	chr7	30135959	30136027	(129209946)	+	(CA)n	Simple_repeat	1	69	(0)	3602686
23	34.1	0.0	1.1	chr7	30136028	30136036	(129209937)	+	(ACGCAC)n	Simple_repeat	58	95	(0)	3602685
12	32.3	2.4	3.6	chr7	30284934	30285015	(129060958)	+	(GGC)n	Simple_repeat	1	84	(0)	3602922
13	7.1	6.2	2.9	chr7	30594954	30594985	(128750988)	+	(TGCTGC)n	Simple_repeat	1	34	(0)	3603361
57	1.9	0.0	0.0	chr7	30671803	30671857	(128674116)	+	(TGA)n	Simple_repeat	1	55	(0)	3603457
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
2986	13.0	9.1	1.0	chr7	31767954	31768436	(127577537)	+	LTR22B1	LTR/ERVK	1	526	(0)	3605178
1771	19.8	0.8	4.3	chr7	31768437	31768489	(127577484)	C	MLT1A0	LTR/ERVL-MaLR	(303)	62	10	3605177
32	36.8	1.1	2.1	chr7	32495286	32495475	(126850498)	+	(GCCCC)n	Simple_repeat	1	192	(0)	3606331
14	10.4	3.0	2.9	chr7	32891346	32891378	(126454595)	+	(GCGCCC)n	Simple_repeat	1	34	(0)	3606929
11	23.9	6.1	0.0	chr7	33062650	33062698	(126283275)	+	(GCGCTC)n	Simple_repeat	1	52	(0)	3607294
25	19.4	0.0	0.0	chr7	33062804	33062856	(126283117)	+	(CCCGC)n	Simple_repeat	1	53	(0)	3607295
14	17.5	0.0	0.0	chr7	35262094	35262125	(124083848)	+	(GCGGTG)n	Simple_repeat	1	32	(0)	3610394
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
12	24.0	4.5	0.0	chr7	36366866	36366909	(122979064)	+	(CCCCG)n	Simple_repeat	1	46	(0)	3612176
1980	7.5	0.0	2.8	chr7	36389081	36389335	(122956638)	C	AluSx3	SINE/Alu	(38)	273	26	3612220
1149	14.8	0.0	0.0	chr7	36389365	36389526	(122956447)	C	AluJb	SINE/Alu	(14)	298	137	3612221
86	12.5	2.7	0.7	chr7	37447600	37447749	(121898224)	+	(CA)n	Simple_repeat	1	154	(0)	3613760
12	21.5	2.5	2.4	chr7	37916454	37916518	(121429455)	+	(GCGCC)n	Simple_repeat	1	65	(0)	3614409
38	2.6	0.0	0.0	chr7	39623633	39623671	(119722302)	+	(TCC)n	Simple_repeat	1	39	(0)	3616827
2108	17.6	2.1	0.3	chr7	40717195	40717618	(118628355)	C	MER61C	LTR/ERV1	(0)	428	13	3618877
32	34.7	1.4	0.7	chr7	42221422	42221570	(117124403)	+	(CACA)n	Simple_repeat	1	150	(0)	3620921
899	17.6	26.8	0.3	chr7	42887678	42887994	(116457979)	+	MER54B	LTR/ERVL	1	404	(497)	3621806
43	0.0	0.0	0.0	chr7	42887995	42888031	(116457942)	+	(TC)n	Simple_repeat	1	37	(0)	3621807
52	0.0	2.1	0.0	chr7	42888046	42888093	(116457880)	+	(GT)n	Simple_repeat	1	49	(0)	3621808
237	20.6	6.4	5.2	chr7	42888108	42888184	(116457789)	+	MER54B	LTR/ERVL	367	444	(349)	3621806
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
631	18.9	10.7	0.6	chr7	43197753	43197912	(116148061)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3622265
224	27.2	3.4	1.7	chr7	43198011	43198815	(116147158)	+	(AC)n	Simple_repeat	1	832	(0)	3622266
12	12.8	5.6	2.6	chr7	43758492	43758527	(115587446)	+	(GGCGCCA)n	Simple_repeat	1	38	(0)	3623125
23	15.4	1.9	1.9	chr7	43758557	43758608	(115587365)	+	(CCCTC)n	Simple_repeat	1	53	(0)	3623126
13	32.2	0.0	6.5	chr7	43758609	43758648	(115587325)	+	(CCCCCCG)n	Simple_repeat	1	92	(0)	3623127
544	12.0	13.8	1.0	chr7	44574470	44574570	(114771403)	+	MLT1D	LTR/ERVL-MaLR	390	505	(0)	3624434
1650	15.5	3.3	1.5	chr7	44803596	44803860	(114542113)	+	AluSx	SINE/Alu	25	294	(18)	3624896
1450	17.5	4.8	3.1	chr7	44803864	44804000	(114541973)	+	AluJb	SINE/Alu	3	142	(170)	3624897
2228	10.2	0.3	1.4	chr7	44804001	44804295	(114541678)	+	AluSq2	SINE/Alu	2	293	(20)	3624898
851	7.4	6.9	0.0	chr7	44848675	44848796	(114497177)	+	AluSx3	SINE/Alu	174	304	(7)	3625017
373	28.1	8.4	2.1	chr7	44963320	44963508	(114382465)	+	MER3	DNA/hAT-Charlie	4	205	(4)	3625258
11842	11.7	1.2	1.6	chr7	46015232	46018455	(113327518)	+	L1PA8A	LINE/L1	120	3343	(3118)	3626708
258	30.2	3.6	0.9	chr7	47979832	47979938	(111366035)	+	Charlie21a	DNA/hAT-Charlie	27	136	(1077)	3629309
499	27.3	9.9	0.0	chr7	50316184	50316337	(109029636)	C	MER45A	DNA/hAT-Tip100	(7)	171	1	3632241
1110	2.5	0.0	0.0	chr7	54759839	54759956	(104586017)	C	AluSg7	SINE/Alu	(191)	118	1	3637767
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
17	28.2	5.2	0.0	chr7	55964833	55964909	(103381064)	+	G-rich	Low_complexity	1	81	(0)	3639596
17613	6.3	0.2	0.3	chr7	64948007	64950297	(94395676)	+	HERVK9-int	LTR/ERVK	3733	6021	(0)	3646993
359	24.2	14.3	0.6	chr7	66413115	66413315	(92932658)	C	FLAM_C	SINE/Alu	(2)	300	45	3649935
1427	14.1	2.8	3.5	chr7	66739981	66740236	(92605737)	C	AluJr	SINE/Alu	(22)	290	37	3650716
858	13.2	0.0	2.2	chr7	66920652	66920787	(92425186)	C	FLAM_C	SINE/Alu	(10)	133	1	3651107
43	31.3	2.8	5.0	chr7	66920826	66921080	(92424893)	+	(CA)n	Simple_repeat	1	262	(0)	3651108
12	15.8	0.0	3.3	chr7	66921065	66921094	(92424879)	+	(CACG)n	Simple_repeat	1	30	(0)	3651109
1656	20.3	8.1	3.5	chr7	69103880	69104246	(90241727)	C	MER21C	LTR/ERVL	(355)	583	199	3655923
2501	13.2	1.4	0.0	chr7	69104294	69104848	(90241125)	C	L1P4	LINE/L1	(539)	5626	5057	3655924
1072	16.9	0.0	0.0	chr7	69108571	69108736	(90237237)	+	FRAM	SINE/Alu	1	166	(10)	3655932
325	25.0	3.3	0.0	chr7	69609067	69609154	(89736819)	C	MIR3	SINE/MIR	(48)	160	70	3657081
13	13.6	0.0	7.9	chr7	70695129	70695166	(88650807)	+	(GGCG)n	Simple_repeat	1	38	(0)	3658704
27	25.7	0.0	1.5	chr7	72337407	72337474	(87008499)	+	(CA)n	Simple_repeat	1	68	(0)	3662111
306	24.6	19.8	0.8	chr7	73308961	73309091	(86036882)	C	L1M5	LINE/L1	(601)	5523	5362	3664325
15	0.0	0.0	0.0	chr7	73309092	73309108	(86036865)	+	(AT)n	Simple_repeat	1	17	(0)	3664326
2030	9.9	4.2	0.0	chr7	73309110	73309382	(86036591)	C	AluSx	SINE/Alu	(21)	291	7	3664327
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
22	11.8	0.0	0.0	chr7	73770144	73770180	(85575793)	+	(GACG)n	Simple_repeat	1	37	(0)	3665431
14	25.5	8.1	0.0	chr7	73770213	73770286	(85575687)	+	(GCTGCG)n	Simple_repeat	1	80	(0)	3665432
14	20.3	4.4	0.0	chr7	73831910	73831954	(85514019)	+	(GGCCACT)n	Simple_repeat	1	47	(0)	3665584
2201	8.4	0.3	2.6	chr7	73841472	73841779	(85504194)	C	AluSx1	SINE/Alu	(11)	301	1	3665604
225	33.3	2.7	0.0	chr7	73841912	73841983	(85503990)	C	MIRb	SINE/MIR	(72)	196	123	3665605
202	27.9	2.5	3.7	chr7	74026449	74026530	(85319443)	C	MIRb	SINE/MIR	(75)	193	113	3666008
14	19.7	4.2	2.0	chr7	75914944	75914991	(83430982)	+	(GCCGG)n	Simple_repeat	1	50	(0)	3670900
276	23.1	5.3	1.3	chr7	75915461	75915577	(83430396)	+	MIR1_Amn	SINE/MIR	22	149	(59)	3670901
968	10.4	0.0	0.8	chr7	76198617	76198750	(83147223)	+	AluSx	SINE/Alu	1	133	(179)	3671557
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
2264	15.8	8.2	2.4	chr7	76224650	76225109	(83120864)	C	LTR22B	LTR/ERVK	(3)	489	1	3671633
589	19.8	2.3	1.6	chr7	76225110	76225224	(83120749)	C	MIRc	SINE/MIR	(119)	149	32	3671632
635	12.9	2.3	0.3	chr7	76303268	76303404	(83042569)	+	FLAM_C	SINE/Alu	22	166	(0)	3671828
2144	12.5	0.0	2.5	chr7	76424347	76424665	(82921308)	+	AluSz	SINE/Alu	1	311	(1)	3672133
16	5.2	0.0	0.0	chr7	76424671	76424690	(82921283)	+	(CA)n	Simple_repeat	1	20	(0)	3672134
543	23.1	5.2	2.6	chr7	76424699	76424849	(82921124)	C	MER5A1	DNA/hAT-Charlie	(11)	155	1	3672135
21	9.5	0.0	0.0	chr7	78020089	78020122	(81325851)	+	(CCACCC)n	Simple_repeat	1	34	(0)	3674884
783	28.5	12.2	0.9	chr7	84277251	84277569	(75068404)	+	L1MC4	LINE/L1	6565	6924	(1118)	3683349
1078	10.9	3.1	0.0	chr7	84277571	84277726	(75068247)	C	MSTA	LTR/ERVL-MaLR	(0)	428	268	3683350
4150	19.4	0.1	0.3	chr7	84277731	84278484	(75067489)	C	MSTA-int	LTR/ERVL-MaLR	(898)	753	1	3683351
13	24.2	4.1	0.0	chr7	88759582	88759630	(70586343)	+	G-rich	Low_complexity	1	51	(0)	3688944
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
748	15.0	17.7	0.7	chr7	92447150	92447303	(66898670)	+	MER53	DNA/hAT	3	188	(5)	3693907
225	0.0	0.0	0.0	chr7	92447312	92447336	(66898637)	+	Charlie1b	DNA/hAT-Charlie	495	519	(4)	3693908
13	16.0	0.0	3.2	chr7	94656131	94656161	(64689812)	+	(CTCCC)n	Simple_repeat	1	31	(0)	3696936
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
12425	10.4	0.7	1.6	chr7	94968696	94970632	(64375341)	C	L1PA7	LINE/L1	(4573)	1926	1	3697310
12	8.8	10.5	2.4	chr7	95772508	95772545	(63573428)	+	G-rich	Low_complexity	1	42	(0)	3698469
15	29.2	2.9	1.4	chr7	95772666	95772733	(63573240)	+	(CCG)n	Simple_repeat	1	70	(0)	3698470
12	21.7	0.0	0.0	chr7	95772813	95772844	(63573129)	+	(CCACC)n	Simple_repeat	1	32	(0)	3698471
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
13	21.7	0.0	2.6	chr7	98878848	98878886	(60467087)	+	(GCGCTCG)n	Simple_repeat	1	39	(0)	3703633
49	19.1	3.5	5.6	chr7	99144016	99144187	(60201786)	+	(GCCGCC)n	Simple_repeat	1	178	(0)	3704036
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
2506	5.1	0.7	0.0	chr7	100436848	100437140	(58908833)	C	AluSg	SINE/Alu	(15)	295	1	3706571
29	2.2	5.9	3.7	chr7	100479256	100479306	(58866667)	+	(CTC)n	Simple_repeat	1	54	(0)	3706677
17	30.0	0.0	0.0	chr7	100479352	100479408	(58866565)	+	(CTGCTG)n	Simple_repeat	1	57	(0)	3706678
1714	11.9	4.8	9.8	chr7	100632542	100632869	(58713104)	C	AluJr	SINE/Alu	(0)	312	2	3707006
18	20.4	0.0	2.1	chr7	100633361	100633407	(58712566)	+	(GCGCCCC)n	Simple_repeat	1	47	(0)	3707007
799	14.4	0.0	0.0	chr7	100837125	100837242	(58508731)	C	AluJo	SINE/Alu	(194)	118	1	3707490
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
21	26.0	1.1	5.6	chr7	100966807	100966837	(58379136)	+	(CCCT)n	Simple_repeat	1	67	(19)	3707728
17	19.2	1.9	3.8	chr7	100966838	100966889	(58379084)	+	(CCCCT)n	Simple_repeat	1	53	(0)	3707729
21	26.0	1.1	5.6	chr7	100966890	100966896	(58379077)	+	(CCCT)n	Simple_repeat	68	86	(0)	3707728
12	20.2	0.0	6.7	chr7	101154370	101154414	(58191559)	+	G-rich	Low_complexity	1	45	(0)	3708121
15	27.6	0.0	4.5	chr7	101154651	101154716	(58191257)	+	G-rich	Low_complexity	1	66	(0)	3708122
17	34.2	3.2	2.4	chr7	101162865	101162941	(58183032)	+	G-rich	Low_complexity	1	113	(14)	3708136
18	18.1	2.6	0.0	chr7	101162942	101162979	(58182994)	+	(GC)n	Simple_repeat	1	39	(0)	3708137
18	19.5	0.0	5.7	chr7	101163032	101163084	(58182889)	+	(CTC)n	Simple_repeat	1	53	(0)	3708138
34	18.5	2.2	3.2	chr7	101163297	101163387	(58182586)	+	G-rich	Low_complexity	1	93	(0)	3708139
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
27	0.0	0.0	0.0	chr7	101165787	101165812	(58180161)	+	(AATG)n	Simple_repeat	1	26	(0)	3708141
2068	6.0	0.7	5.3	chr7	101201449	101201729	(58144244)	C	AluSz	SINE/Alu	(44)	268	1	3708232
14	24.7	1.8	3.5	chr7	101202084	101202139	(58143834)	+	G-rich	Low_complexity	1	57	(0)	3708233
197	32.0	7.2	2.8	chr7	101244545	101244650	(58101323)	+	MIRb	SINE/MIR	155	265	(3)	3708308
2180	11.5	0.0	0.0	chr7	101293753	101294038	(58051935)	C	AluSx1	SINE/Alu	(12)	300	15	3708441
2713	20.7	6.9	5.8	chr7	101294039	101294597	(58051376)	C	LTR8A	LTR/ERV1	(150)	577	1	3708440
225	28.9	8.0	2.8	chr7	101299378	101299484	(58046489)	+	L1ME4b	LINE/L1	561	673	(219)	3708457
1855	25.1	16.9	2.6	chr7	101299647	101301210	(58044763)	+	L1M2	LINE/L1	95	2372	(4837)	3708458
2349	8.0	0.0	0.0	chr7	101302358	101302656	(58043317)	C	AluSq2	SINE/Alu	(14)	299	1	3708462
626	28.1	10.3	2.6	chr7	101302809	101303192	(58042781)	+	L1M2	LINE/L1	11	427	(6422)	3708463
2008	7.2	9.2	0.0	chr7	101307846	101308121	(58037852)	+	AluSg	SINE/Alu	1	304	(6)	3708474
235	24.6	6.9	7.6	chr7	101308122	101308170	(58037803)	+	L1MC	LINE/L1	5882	5927	(1955)	3708472
2736	27.4	8.9	4.8	chr7	101308329	101309221	(58036752)	+	L1M2	LINE/L1	2	1495	(5621)	3708475
1168	17.2	0.0	2.7	chr7	101442471	101442691	(57903282)	C	MER4E1	LTR/ERV1	(566)	215	1	3708830
16	15.9	0.0	0.0	chr7	101814087	101814114	(57531859)	+	(C)n	Simple_repeat	1	28	(0)	3709741
13	17.0	0.0	5.4	chr7	101869739	101869775	(57476198)	+	(GCAGG)n	Simple_repeat	1	37	(0)	3709845
1685	15.9	0.7	6.0	chr7	101870145	101870458	(57475515)	C	AluJr	SINE/Alu	(3)	309	13	3709846
2009	14.2	0.0	2.3	chr7	101881896	101882204	(57463769)	+	AluJb	SINE/Alu	1	302	(10)	3709866
12	8.4	0.0	6.9	chr7	102363835	102363863	(56982110)	+	(TGCG)n	Simple_repeat	1	29	(0)	3710829
12	24.3	4.0	1.9	chr7	103297462	103297511	(56048462)	+	(GGC)n	Simple_repeat	1	52	(0)	3712509
434	16.1	10.3	0.0	chr7	104552034	104552120	(54793853)	+	MIR	SINE/MIR	44	140	(122)	3714315
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
21	10.0	0.0	0.0	chr7	105639142	105639174	(53706799)	+	(CGC)n	Simple_repeat	1	33	(0)	3716284
17	0.0	0.0	0.0	chr7	105639273	105639291	(53706682)	+	(T)n	Simple_repeat	1	19	(0)	3716285
251	27.3	0.0	1.1	chr7	105643548	105643636	(53702337)	C	AmnSINE1	SINE/5S-Deu-L2	(487)	88	1	3716290
14	12.0	5.3	2.5	chr7	106030306	106030343	(53315630)	+	(GAGGCCA)n	Simple_repeat	1	40	(0)	3716988
434	25.9	14.4	6.0	chr7	106030431	106030664	(53315309)	+	L2c	LINE/L2	3093	3349	(38)	3716989
2382	6.8	0.0	1.1	chr7	109590975	109591254	(49754719)	+	AluSc	SINE/Alu	1	277	(32)	3721988
22575	11.9	1.1	2.5	chr7	112641134	112647421	(46698552)	C	L1PA8A	LINE/L1	(9)	6307	126	3726128
2019	10.3	0.0	0.0	chr7	112647422	112647674	(46698299)	C	AluSc	SINE/Alu	(21)	288	36	3726129
12836	16.9	1.4	6.2	chr7	112647675	112647803	(46698170)	C	L1PA8A	LINE/L1	(6228)	125	1	3726128
16	4.5	0.0	0.0	chr7	116862569	116862591	(42483382)	+	(GCC)n	Simple_repeat	1	23	(0)	3731665
16	14.1	5.1	0.0	chr7	116862909	116862955	(42483018)	+	G-rich	Low_complexity	1	49	(0)	3731666
655	24.2	8.1	4.7	chr7	117674907	117675227	(41670746)	C	L1MC5	LINE/L1	(9)	9295	8963	3732873
17	0.0	0.0	0.0	chr7	121799276	121799294	(37546679)	+	(TC)n	Simple_repeat	1	19	(0)	3738212
32	3.2	0.0	0.0	chr7	121799295	121799326	(37546647)	+	(CA)n	Simple_repeat	1	32	(0)	3738213
13	8.5	0.0	3.7	chr7	122144145	122144171	(37201802)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3738703
3987	13.7	14.4	3.2	chr7	122678822	122679810	(36666163)	+	MER11B	LTR/ERVK	1	1222	(14)	3739405
20	22.7	0.0	0.0	chr7	123692527	123692577	(35653396)	+	(AGGCGG)n	Simple_repeat	1	51	(0)	3740813
15	16.5	3.2	7.7	chr7	123692602	123692664	(35653309)	+	(AGGTGG)n	Simple_repeat	1	65	(0)	3740814
21	16.1	0.0	5.6	chr7	123692782	123692835	(35653138)	+	GA-rich	Low_complexity	1	54	(0)	3740815
14	12.5	0.0	0.0	chr7	123692845	123692870	(35653103)	+	(TGG)n	Simple_repeat	1	26	(0)	3740816
14	15.9	0.0	0.0	chr7	124765942	124765969	(34580004)	+	(CCT)n	Simple_repeat	1	28	(0)	3742264
20	25.5	1.1	6.3	chr7	127588308	127588401	(31757572)	+	G-rich	Low_complexity	1	95	(0)	3745955
15	27.6	4.6	0.0	chr7	127588434	127588498	(31757475)	+	(CCCGCG)n	Simple_repeat	1	68	(0)	3745956
11	25.3	0.0	4.3	chr7	127588585	127588630	(31757343)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3745957
14	21.2	7.2	4.5	chr7	128352153	128352235	(30993738)	+	(GCCAG)n	Simple_repeat	1	89	(0)	3747054
15	0.0	0.0	0.0	chr7	128360988	128361004	(30984969)	+	(CA)n	Simple_repeat	1	17	(0)	3747073
25	3.4	0.0	0.0	chr7	128361074	128361103	(30984870)	+	(CT)n	Simple_repeat	1	30	(0)	3747074
43	0.0	0.0	0.0	chr7	128361104	128361140	(30984833)	+	(CA)n	Simple_repeat	1	37	(0)	3747075
31	31.6	2.4	0.8	chr7	128361162	128361284	(30984689)	+	(CA)n	Simple_repeat	1	126	(0)	3747075
336	24.0	21.7	0.6	chr7	128362081	128362249	(30983724)	C	MIRc	SINE/MIR	(34)	234	15	3747077
232	33.5	2.4	2.1	chr7	128456325	128456417	(30889556)	+	L2b	LINE/L2	3304	3425	(1)	3747273
334	34.4	3.0	1.5	chr7	128476269	128476398	(30869575)	C	Tigger19b	DNA/TcMar-Tigger	(178)	372	241	3747318
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
12	0.0	8.0	3.7	chr7	128791339	128791363	(30554610)	+	(GGC)n	Simple_repeat	1	27	(0)	3747978
12	21.7	0.0	0.0	chr7	128791385	128791416	(30554557)	+	(CCCT)n	Simple_repeat	1	32	(0)	3747979
15	18.3	2.1	4.2	chr7	129188540	129188586	(30157387)	+	(CTCCC)n	Simple_repeat	1	48	(0)	3748679
17	29.8	1.5	0.0	chr7	129189247	129189311	(30156662)	+	(GAGCGG)n	Simple_repeat	1	66	(0)	3748681
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
16	24.7	0.0	0.0	chr7	129825231	129825265	(29520708)	+	(TC)n	Simple_repeat	1	35	(0)	3749924
278	23.8	0.0	1.6	chr7	130272534	130272597	(29073376)	C	LTR88c	LTR/Gypsy?	(779)	83	21	3750881
33	9.6	0.0	0.0	chr7	130273579	130273624	(29072349)	+	(AC)n	Simple_repeat	1	46	(0)	3750882
27	8.2	0.0	0.0	chr7	130273663	130273701	(29072272)	+	(T)n	Simple_repeat	1	39	(0)	3750883
14	3.6	6.7	3.1	chr7	131507982	131508011	(27837962)	+	(GTTCTA)n	Simple_repeat	1	32	(0)	3752914
26	0.0	0.0	0.0	chr7	131556271	131556295	(27789678)	+	(GGCGAC)n	Simple_repeat	1	25	(0)	3753007
12	17.6	11.7	1.5	chr7	131556299	131556358	(27789615)	+	(GCA)n	Simple_repeat	1	67	(0)	3753008
24	24.7	1.5	0.0	chr7	131556574	131556640	(27789333)	+	(GCG)n	Simple_repeat	1	68	(0)	3753009
23	10.6	2.4	0.0	chr7	131556650	131556702	(27789271)	+	(GCCCCC)n	Simple_repeat	1	54	(0)	3753010
22	10.1	0.0	6.2	chr7	131556723	131556770	(27789203)	+	(GGCCG)n	Simple_repeat	1	48	(0)	3753011
309	21.4	2.8	0.0	chr7	131621193	131621262	(27724711)	C	MIR	SINE/MIR	(10)	252	181	3753159
94	20.6	0.0	0.5	chr7	131621280	131621475	(27724498)	+	(TGTG)n	Simple_repeat	1	196	(0)	3753160
809	17.7	2.1	0.0	chr7	131621557	131621697	(27724276)	+	AluJb	SINE/Alu	168	311	(1)	3753161
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
1389	21.7	1.8	6.3	chr7	138207259	138207560	(21138413)	C	L1MC4a	LINE/L1	(235)	7807	7524	3763128
4229	13.0	5.2	5.2	chr7	138207561	138208249	(21137724)	C	LTR8	LTR/ERV1	(2)	689	1	3763130
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
18	25.3	4.2	1.3	chr7	139035791	139035862	(20310111)	+	(CCGCCT)n	Simple_repeat	1	75	(0)	3764776
12	18.7	4.3	4.2	chr7	139036021	139036066	(20309907)	+	(CGCGG)n	Simple_repeat	1	48	(0)	3764777
14	17.3	5.1	0.0	chr7	139036105	139036143	(20309830)	+	(GCCTGG)n	Simple_repeat	1	41	(0)	3764778
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
675	29.3	4.6	1.4	chr7	140479687	140479936	(18866037)	+	MIRb	SINE/MIR	1	261	(7)	3767542
50	23.2	0.0	0.0	chr7	140640090	140640196	(18705777)	+	(CA)n	Simple_repeat	1	107	(0)	3767936
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
26	0.0	0.0	0.0	chr7	143345824	143345848	(16000125)	+	(CTGGG)n	Simple_repeat	1	25	(0)	3771797
30	0.0	0.0	0.0	chr7	143882194	143882219	(15463754)	+	(AC)n	Simple_repeat	1	26	(0)	3772443
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
42	0.0	0.0	0.0	chr7	148339975	148340010	(11005963)	+	(GT)n	Simple_repeat	1	36	(0)	3778604
12	25.6	3.4	3.3	chr7	148884434	148884494	(10461479)	+	(GCGCGC)n	Simple_repeat	1	61	(0)	3779540
2111	8.4	0.4	0.0	chr7	149064638	149064900	(10281073)	+	AluSx4	SINE/Alu	18	281	(29)	3779936
40	0.0	0.0	0.0	chr7	149064962	149064995	(10280978)	+	(AC)n	Simple_repeat	1	34	(0)	3779937
1306	10.0	0.0	0.0	chr7	149064996	149065165	(10280808)	+	AluSz6	SINE/Alu	135	304	(8)	3779938
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
3598	11.6	5.5	4.0	chr7	149145290	149145884	(10200089)	+	LTR26D	LTR/ERV1	1	604	(0)	3780148
16	25.2	0.0	3.6	chr7	149147655	149147709	(10198264)	+	(CGG)n	Simple_repeat	1	55	(0)	3780152
15	0.0	0.0	0.0	chr7	149239672	149239690	(10106283)	+	(CGG)n	Simple_repeat	1	19	(0)	3780360
192	23.7	0.0	0.0	chr7	149284868	149284905	(10061068)	+	MIR3	SINE/MIR	116	153	(55)	3780453
14	15.4	6.7	2.1	chr7	150368946	150368990	(8976983)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	3781959
12	23.3	3.7	3.6	chr7	150369549	150369602	(8976371)	+	(TGGTGGC)n	Simple_repeat	1	56	(0)	3781960
13	22.6	6.5	3.7	chr7	150978350	150978426	(8367547)	+	(CCCCCGCT)n	Simple_repeat	1	82	(0)	3782734
25	24.8	1.9	4.7	chr7	150978427	150978434	(8367539)	+	(CGCCCC)n	Simple_repeat	70	106	(0)	3782733
343	18.4	16.3	6.4	chr7	151008469	151008578	(8337395)	C	MIRb	SINE/MIR	(22)	246	124	3782781
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
13	28.0	0.0	4.9	chr7	151062405	151062465	(8283508)	+	(CCCGC)n	Simple_repeat	1	61	(0)	3782841
521	32.1	4.2	6.1	chr7	151080096	151080340	(8265633)	C	MIRc	SINE/MIR	(0)	268	14	3782869
473	32.9	4.1	0.6	chr7	151080356	151080520	(8265453)	+	MIRb	SINE/MIR	5	175	(93)	3782870
13	18.4	4.2	8.0	chr7	151303539	151303610	(8042363)	+	(GGCTG)n	Simple_repeat	1	75	(0)	3783206
2542	8.1	0.0	0.0	chr7	151304028	151304336	(8041637)	C	AluSx	SINE/Alu	(0)	312	4	3783207
29	10.1	3.6	1.8	chr7	151341712	151341766	(8004207)	+	(GCG)n	Simple_repeat	1	57	(0)	3783281
28	2.8	0.0	5.0	chr7	151341988	151342027	(8003946)	+	(GGGCCG)n	Simple_repeat	1	40	(0)	3783282
13	25.4	5.4	0.0	chr7	151448277	151448332	(7897641)	+	G-rich	Low_complexity	1	59	(0)	3783457
290	30.0	3.5	1.8	chr7	151471947	151472058	(7873915)	+	L2a	LINE/L2	2225	2338	(1081)	3783494
377	28.9	3.8	1.5	chr7	151472096	151472225	(7873748)	+	MER63B	DNA/hAT-Blackjack	304	436	(0)	3783497
61	0.0	0.0	0.0	chr7	151875563	151875614	(7470359)	+	(GT)n	Simple_repeat	1	52	(0)	3784164
14	11.7	3.6	0.0	chr7	151876780	151876807	(7469166)	+	(CGC)n	Simple_repeat	1	29	(0)	3784166
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
155	24.9	0.3	0.5	chr7	155205936	155206308	(4139665)	+	(TG)n	Simple_repeat	1	374	(0)	3789350
1822	21.2	1.6	0.0	chr7	155206325	155206544	(4139429)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	166	3789351
45	24.8	3.2	4.2	chr7	155381997	155382182	(3963791)	+	(CGTGTG)n	Simple_repeat	1	192	(0)	3789564
14	18.5	3.6	5.3	chr7	155644083	155644137	(3701836)	+	G-rich	Low_complexity	1	57	(0)	3789929
15	26.8	4.1	0.0	chr7	155644152	155644200	(3701773)	+	(GC)n	Simple_repeat	1	51	(0)	3789930
15	24.6	2.0	2.0	chr7	155644567	155644616	(3701357)	+	(CGG)n	Simple_repeat	1	51	(0)	3789931
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
993	19.0	9.5	1.4	chr7	157310655	157311042	(2034931)	C	LTR54	LTR/ERV1	(5)	505	19	3792253
453	18.5	0.0	16.9	chr7	157311043	157311086	(2034887)	+	LTR62	LTR/ERVL	1	36	(673)	3792254
2060	12.6	1.7	0.0	chr7	157311087	157311371	(2034602)	+	AluSz	SINE/Alu	9	298	(14)	3792255
453	18.5	0.0	16.9	chr7	157311372	157311456	(2034517)	+	LTR62	LTR/ERVL	37	108	(601)	3792254
95	29.2	0.0	0.0	chr7	157874700	157875070	(1470903)	+	(CA)n	Simple_repeat	1	371	(0)	3792810
329	29.6	8.6	2.7	chr7	158010615	158010833	(1335140)	C	Tigger15a	DNA/TcMar-Tigger	(0)	715	483	3792924
363	23.4	0.4	3.9	chr7	158262202	158263196	(1082777)	+	(AC)n	Simple_repeat	1	999	(0)	3793117
31	28.3	1.1	1.1	chr7	158263361	158263450	(1082523)	+	(CA)n	Simple_repeat	1	91	(0)	3793118
228	30.4	7.3	6.5	chr7	158468591	158468713	(877260)	C	MIR3	SINE/MIR	(55)	153	30	3793276
1976	12.8	0.3	2.6	chr7	158469160	158469465	(876508)	+	AluSx1	SINE/Alu	1	299	(13)	3793277
474	24.6	2.1	0.0	chr7	158500785	158500926	(845047)	C	MER5A	DNA/hAT-Charlie	(30)	159	15	3793311
12	17.6	4.5	4.3	chr7	158705144	158705187	(640786)	+	GA-rich	Low_complexity	1	46	(0)	3793569
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
12049	17.4	1.6	5.4	chr8	889288	890202	(144248434)	C	L1PA8A	LINE/L1	(5520)	833	11	3795277
12	18.1	0.0	3.0	chr8	6835514	6835546	(138303090)	+	(CCTGCC)n	Simple_repeat	1	33	(0)	3802658
685	29.4	13.7	2.5	chr8	9057547	9058294	(136080342)	C	L2a	LINE/L2	(0)	3426	2567	3805841
13	13.1	0.0	0.0	chr8	9150704	9150728	(135987908)	+	(GGA)n	Simple_repeat	1	25	(0)	3806005
23	17.7	0.0	0.0	chr8	9903481	9903526	(135235110)	+	GA-rich	Low_complexity	1	46	(0)	3807238
13	18.9	2.8	0.0	chr8	9903838	9903873	(135234763)	+	(CTCCC)n	Simple_repeat	1	37	(0)	3807239
18	18.9	4.2	0.0	chr8	9933877	9933924	(135204712)	+	(GCCTC)n	Simple_repeat	1	50	(0)	3807297
208	37.1	5.3	3.3	chr8	9933976	9934159	(135204477)	+	MIRc	SINE/MIR	19	206	(62)	3807298
349	33.1	7.0	6.1	chr8	9949537	9949866	(135188770)	+	MLT1J	LTR/ERVL-MaLR	99	510	(100)	3807330
22	10.4	0.0	0.0	chr8	9950196	9950227	(135188409)	+	(GT)n	Simple_repeat	1	32	(0)	3807331
215	30.7	9.5	5.6	chr8	10631476	10631637	(134506999)	C	MIRc	SINE/MIR	(3)	265	97	3808377
193	27.9	9.3	2.2	chr8	10928105	10928243	(134210393)	C	MIR3	SINE/MIR	(34)	174	25	3808789
1467	20.2	3.9	1.0	chr8	10990581	10990882	(134147754)	C	AluJb	SINE/Alu	(1)	311	1	3808891
35	21.4	2.5	4.9	chr8	11200979	11200995	(133937641)	+	(GCG)n	Simple_repeat	1	30	(92)	3809241
17	16.4	1.9	5.6	chr8	11200996	11201048	(133937588)	+	G-rich	Low_complexity	1	54	(0)	3809242
35	21.4	2.5	4.9	chr8	11201049	11201097	(133937539)	+	(GCG)n	Simple_repeat	31	122	(0)	3809241
16	32.6	0.0	0.0	chr8	11201368	11201422	(133937214)	+	G-rich	Low_complexity	1	55	(0)	3809244
12	25.3	5.8	0.0	chr8	15236892	15236943	(129901693)	+	(CCCGCGT)n	Simple_repeat	1	55	(0)	3815071
12	8.9	4.2	0.0	chr8	15540512	15540535	(129598101)	+	(CTG)n	Simple_repeat	1	25	(0)	3815553
19	24.5	5.8	2.2	chr8	17002708	17002794	(128135842)	+	GA-rich	Low_complexity	1	92	(0)	3817553
20	19.1	3.1	4.5	chr8	17157071	17157135	(127981501)	+	(CGC)n	Simple_repeat	1	67	(0)	3817789
13	15.8	2.7	2.6	chr8	17246506	17246542	(127892094)	+	(CCCCCAG)n	Simple_repeat	1	38	(0)	3817917
14	0.0	0.0	0.0	chr8	17246694	17246711	(127891925)	+	(CTC)n	Simple_repeat	1	18	(0)	3817918
27	6.1	0.0	0.0	chr8	17246733	17246767	(127891869)	+	(GGCGGT)n	Simple_repeat	1	35	(0)	3817919
18	14.0	2.4	2.4	chr8	17413210	17413250	(127725386)	+	(CCT)n	Simple_repeat	1	42	(0)	3818144
17	10.0	3.1	0.0	chr8	17923983	17924014	(127214622)	+	(GTTTT)n	Simple_repeat	1	33	(0)	3818943
31	25.6	0.0	8.8	chr8	19013798	19013956	(126124680)	+	G-rich	Low_complexity	1	159	(0)	3820500
21	14.6	0.0	0.0	chr8	19817439	19817476	(125321160)	+	(GCG)n	Simple_repeat	1	38	(0)	3821835
16	9.9	0.0	5.6	chr8	19817790	19817825	(125320811)	+	(CTCCC)n	Simple_repeat	1	36	(0)	3821836
13	16.2	10.4	0.0	chr8	19817826	19817873	(125320763)	+	(TACACCT)n	Simple_repeat	1	53	(0)	3821837
14	15.3	0.0	0.0	chr8	20303624	20303652	(124834984)	+	(GACG)n	Simple_repeat	1	29	(0)	3822603
256	16.1	9.2	3.0	chr8	20353292	20353375	(124785261)	C	UCON132b	DNA/hAT-Tip100	(27)	121	43	3822696
325	27.7	5.0	7.5	chr8	20353378	20353541	(124785095)	+	MIR3	SINE/MIR	14	165	(43)	3822697
13	18.9	2.8	0.0	chr8	22066771	22066806	(123071830)	+	(GCGCCCA)n	Simple_repeat	1	37	(0)	3825520
12	23.3	0.0	0.0	chr8	22156933	22156967	(122981669)	+	(GTGCTT)n	Simple_repeat	1	35	(0)	3825653
29	31.5	1.6	5.8	chr8	22165128	22165313	(122973323)	+	G-rich	Low_complexity	1	189	(0)	3825674
338	23.8	9.5	0.0	chr8	22561601	22561705	(122576931)	+	MIRb	SINE/MIR	114	229	(39)	3826468
178	19.5	3.9	3.4	chr8	22599016	22599525	(122539111)	+	(CCTCT)n	Simple_repeat	1	530	(0)	3826527
40	17.7	1.9	4.6	chr8	23069436	23069542	(122069094)	+	(TTCT)n	Simple_repeat	1	109	(0)	3827294
36	25.8	3.4	3.9	chr8	23069543	23069582	(122069054)	+	(CCTT)n	Simple_repeat	3	154	(0)	3827295
331	35.6	1.7	0.0	chr8	23287816	23287930	(121850706)	+	MIRb	SINE/MIR	23	139	(129)	3827672
13	12.0	5.0	4.8	chr8	23403695	23403734	(121734902)	+	(GCGCC)n	Simple_repeat	1	42	(0)	3827851
24	11.2	4.2	0.0	chr8	23682701	23682748	(121455888)	+	(CTCTGG)n	Simple_repeat	1	50	(0)	3828342
21	9.7	0.0	0.0	chr8	25000401	25000434	(120138202)	+	(GAGG)n	Simple_repeat	1	34	(0)	3830314
2266	11.9	0.0	0.3	chr8	26636730	26637041	(118501595)	C	AluSx1	SINE/Alu	(1)	311	1	3833086
308	30.0	0.0	6.2	chr8	26637328	26637423	(118501213)	C	MIRc	SINE/MIR	(64)	204	115	3833087
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
502	25.0	3.5	1.4	chr8	27772777	27772918	(117365718)	+	MIR	SINE/MIR	88	232	(30)	3834959
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
17	10.7	0.0	0.0	chr8	28401816	28401845	(116736791)	+	(CCCT)n	Simple_repeat	1	30	(0)	3836060
302	24.8	14.2	7.0	chr8	28411265	28411576	(116727060)	+	L1ME4a	LINE/L1	5775	6112	(12)	3836083
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
16	28.6	1.7	0.0	chr8	28890493	28890551	(116248085)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3837025
12	7.2	10.3	0.0	chr8	28890577	28890605	(116248031)	+	(CCCT)n	Simple_repeat	1	32	(0)	3837026
12	14.4	0.0	0.0	chr8	30095456	30095479	(115043157)	+	(GCC)n	Simple_repeat	1	24	(0)	3839029
789	18.1	4.0	0.0	chr8	30382835	30382978	(114755658)	C	BC200	scRNA	(45)	155	6	3839679
689	12.0	0.5	5.2	chr8	30383251	30383386	(114755250)	+	FLAM_C	SINE/Alu	8	131	(2)	3839680
233	18.3	12.3	4.0	chr8	30541183	30541256	(114597380)	+	MIR3	SINE/MIR	85	165	(43)	3839961
13	20.3	0.0	4.7	chr8	30658004	30658046	(114480590)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	3840123
26	14.5	0.0	0.0	chr8	30658138	30658183	(114480453)	+	(GGC)n	Simple_repeat	1	46	(0)	3840124
11	17.2	7.7	0.0	chr8	30727772	30727810	(114410826)	+	(CGCGCGC)n	Simple_repeat	1	42	(0)	3840308
890	16.1	1.2	2.4	chr8	30728259	30728426	(114410210)	C	FRAM	SINE/Alu	(10)	166	1	3840309
28	6.0	0.0	0.0	chr8	32548858	32548892	(112589744)	+	(TCC)n	Simple_repeat	1	35	(0)	3843151
16	18.0	0.0	2.5	chr8	32548904	32548943	(112589693)	+	(CCTCCC)n	Simple_repeat	1	40	(0)	3843152
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
33	17.1	0.0	0.0	chr8	33599116	33599177	(111539459)	+	(CACCAT)n	Simple_repeat	1	62	(0)	3844860
27	27.0	0.0	0.0	chr8	33599178	33599185	(111539451)	+	(CAT)n	Simple_repeat	1	70	(0)	3844861
183	25.7	0.2	1.5	chr8	37494219	37494696	(107643940)	+	(GT)n	Simple_repeat	1	479	(0)	3850402
18	22.2	6.7	1.2	chr8	37796835	37796922	(107341714)	+	(CGGCAG)n	Simple_repeat	1	92	(0)	3850992
31	3.0	0.0	0.0	chr8	37899609	37899642	(107238994)	+	(CGCCC)n	Simple_repeat	1	34	(0)	3851171
38	0.0	0.0	0.0	chr8	38442363	38442395	(106696241)	+	(GT)n	Simple_repeat	1	33	(0)	3852287
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
335	28.6	5.3	3.1	chr8	38468957	38469086	(106669550)	+	MIRb	SINE/MIR	88	220	(48)	3852338
298	29.8	0.8	2.1	chr8	38502520	38503544	(106635092)	+	(GT)n	Simple_repeat	1	1033	(0)	3852412
138	26.5	1.1	0.5	chr8	41827625	41827993	(103310643)	+	(CA)n	Simple_repeat	1	373	(0)	3857667
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
1460	13.8	1.2	5.2	chr8	42391246	42391514	(102747122)	+	AluJo	SINE/Alu	1	258	(54)	3858711
367	31.1	7.5	2.9	chr8	42760692	42760830	(102377806)	C	L2a	LINE/L2	(248)	3178	3033	3859438
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
1583	14.6	3.9	1.4	chr8	43093803	43094077	(102044559)	+	AluJb	SINE/Alu	1	282	(30)	3860104
25	12.2	0.0	0.0	chr8	49911552	49911588	(95227048)	+	(A)n	Simple_repeat	1	37	(0)	3865001
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
200	23.6	5.2	0.0	chr8	53692934	53692988	(91445648)	C	L2a	LINE/L2	(13)	3413	3356	3869806
20	7.8	0.0	0.0	chr8	53693092	53693118	(91445518)	+	(CA)n	Simple_repeat	1	27	(0)	3869807
9020	3.8	0.3	0.1	chr8	53766124	53767190	(91371446)	+	MER11C	LTR/ERVK	1	1069	(2)	3869898
182	29.0	7.5	0.0	chr8	53843645	53843706	(91294930)	C	MIRb	SINE/MIR	(88)	180	114	3870001
28	0.0	0.0	0.0	chr8	54022277	54022302	(91116334)	+	(GCG)n	Simple_repeat	1	26	(0)	3870336
2422	8.3	0.0	0.3	chr8	54022731	54023018	(91115618)	C	AluSc	SINE/Alu	(21)	288	2	3870337
613	28.2	8.4	1.1	chr8	55001165	55001429	(90137207)	+	MamRep4096	DNA/hAT-Tip100	1	286	(140)	3871858
15	22.0	1.7	5.1	chr8	55102738	55102795	(90035841)	+	(GCTGG)n	Simple_repeat	1	59	(0)	3871976
13	24.4	2.2	2.1	chr8	55103145	55103190	(90035446)	+	(CAG)n	Simple_repeat	1	47	(0)	3871977
12	20.4	5.6	3.5	chr8	61288286	61288339	(83850297)	+	(CCGCTCC)n	Simple_repeat	1	57	(0)	3880437
22	23.3	1.6	1.6	chr8	61714285	61714347	(83424289)	+	(GCT)n	Simple_repeat	1	64	(0)	3880999
13	15.2	0.0	3.2	chr8	61714631	61714661	(83423975)	+	(GCCCC)n	Simple_repeat	1	31	(0)	3881000
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
23	17.5	0.0	0.0	chr8	66666906	66666950	(78471686)	+	(GGC)n	Simple_repeat	1	45	(0)	3887825
14	15.6	5.6	0.0	chr8	66667191	66667226	(78471410)	+	(CACT)n	Simple_repeat	1	38	(0)	3887826
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
2075	9.0	3.0	1.7	chr8	66925864	66926164	(78212472)	+	AluSx3	SINE/Alu	1	305	(6)	3888376
29	0.0	0.0	0.0	chr8	67343821	67343847	(77794789)	+	(GCG)n	Simple_repeat	1	27	(0)	3889097
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
46	2.3	0.0	0.0	chr8	67951892	67951935	(77186701)	+	(TG)n	Simple_repeat	1	44	(0)	3890058
12	14.3	3.0	2.9	chr8	67952127	67952159	(77186477)	+	(GCCGG)n	Simple_repeat	1	34	(0)	3890059
11	14.8	4.9	4.7	chr8	67952330	67952370	(77186266)	+	(GCAGCGG)n	Simple_repeat	1	43	(0)	3890060
24	24.6	0.0	0.0	chr8	68330773	68330826	(76807810)	+	(AC)n	Simple_repeat	1	54	(0)	3890566
13	12.4	5.4	2.6	chr8	68330970	68331006	(76807630)	+	(GCGGAGA)n	Simple_repeat	1	39	(0)	3890567
12	14.1	7.5	0.0	chr8	69834053	69834086	(75304550)	+	(GCGTGC)n	Simple_repeat	1	36	(0)	3892658
50	0.0	0.0	0.0	chr8	69834087	69834129	(75304507)	+	(CA)n	Simple_repeat	1	43	(0)	3892659
16	28.6	1.4	2.8	chr8	70402238	70402308	(74736328)	+	(GGTGGA)n	Simple_repeat	1	72	(0)	3893734
12086	14.3	1.0	0.9	chr8	70804981	70808319	(74330317)	+	L1PA10	LINE/L1	4	3355	(3106)	3894380
28	0.0	0.0	0.0	chr8	73009049	73009074	(72129562)	+	(GAG)n	Simple_repeat	1	26	(0)	3897250
12	17.3	0.0	5.6	chr8	73285163	73285198	(71853438)	+	GA-rich	Low_complexity	1	36	(0)	3897749
235	10.9	0.0	9.8	chr8	73285487	73285537	(71853099)	+	CR1-3_Croc	LINE/CR1	3541	3586	(19)	3897750
38	24.8	3.0	4.7	chr8	73746880	73747045	(71391591)	+	(CCCCGC)n	Simple_repeat	1	171	(0)	3898434
18	4.8	0.0	0.0	chr8	76775891	76775912	(68362724)	+	(T)n	Simple_repeat	1	22	(0)	3902650
35	22.6	1.3	0.0	chr8	78515795	78515872	(66622764)	+	(TG)n	Simple_repeat	1	79	(0)	3904791
14	18.0	2.0	5.9	chr8	79767523	79767572	(65371064)	+	(CTCCG)n	Simple_repeat	1	51	(0)	3906479
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
19	25.2	1.2	5.9	chr8	80487371	80487475	(64651161)	+	(GGC)n	Simple_repeat	1	100	(0)	3907904
25	19.4	5.6	0.0	chr8	84183092	84183162	(60955474)	+	(GCGGCA)n	Simple_repeat	1	75	(0)	3912802
24	25.0	2.1	4.2	chr8	84183290	84183382	(60955254)	+	(CGC)n	Simple_repeat	1	95	(0)	3912803
18	16.0	0.0	0.0	chr8	85107298	85107332	(60031304)	+	(GGC)n	Simple_repeat	1	35	(0)	3914051
13	4.2	0.0	10.0	chr8	85177041	85177070	(59961566)	+	(CCT)n	Simple_repeat	1	30	(0)	3914154
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
19	0.0	0.0	0.0	chr8	88327748	88327764	(56810872)	+	(GC)n	Simple_repeat	1	17	(0)	3918473
41	5.7	1.8	1.7	chr8	88327765	88327821	(56810815)	+	(CA)n	Simple_repeat	1	58	(0)	3918474
14	26.7	1.8	1.8	chr8	88327822	88327859	(56810777)	+	(CGCA)n	Simple_repeat	1	38	(0)	3918475
20	9.2	0.0	2.7	chr8	89902975	89903011	(55235625)	+	(TGGGG)n	Simple_repeat	1	37	(0)	3920467
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
35	5.0	0.0	0.0	chr8	90985245	90985286	(54153350)	+	(GGCGGGG)n	Simple_repeat	1	42	(0)	3921892
17	18.6	0.0	8.0	chr8	92051538	92051587	(53087049)	+	(TC)n	Simple_repeat	1	50	(0)	3923354
21	17.8	0.0	0.0	chr8	92051565	92051602	(53087034)	+	(CA)n	Simple_repeat	1	38	(0)	3923355
43	2.5	0.0	0.0	chr8	92051603	92051643	(53086993)	+	(CT)n	Simple_repeat	1	41	(0)	3923356
2268	9.0	0.7	1.0	chr8	93741391	93741691	(51396945)	+	AluSq	SINE/Alu	1	300	(13)	3925709
15	24.9	0.0	0.0	chr8	93916808	93916850	(51221786)	+	(CCGCCC)n	Simple_repeat	1	43	(0)	3926055
182	22.4	0.0	5.8	chr8	95270235	95270286	(49868350)	+	MIRc	SINE/MIR	213	261	(7)	3928509
807	21.4	6.5	3.1	chr8	95270451	95270672	(49867964)	+	MER63D	DNA/hAT-Blackjack	2	231	(830)	3928510
14	28.8	4.1	1.3	chr8	97776270	97776342	(47362294)	+	G-rich	Low_complexity	1	76	(0)	3932413
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
12	16.1	5.7	0.0	chr8	100158300	100158334	(44980302)	+	G-rich	Low_complexity	1	37	(0)	3936264
271	30.4	8.0	3.4	chr8	100847811	100847929	(44290707)	+	L2c	LINE/L2	3254	3378	(9)	3937648
13	24.0	0.0	2.4	chr8	100953004	100953044	(44185592)	+	(GCCGG)n	Simple_repeat	1	41	(0)	3937837
12	26.9	6.8	1.3	chr8	102239059	102239131	(42899505)	+	(CCCCG)n	Simple_repeat	1	78	(0)	3940005
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
12	16.8	8.8	3.2	chr8	103299019	103299075	(41839561)	+	G-rich	Low_complexity	1	62	(0)	3942080
16	11.7	0.0	0.0	chr8	103371702	103371729	(41766907)	+	(CTG)n	Simple_repeat	1	28	(0)	3942202
36	5.2	0.0	0.0	chr8	103498695	103498734	(41639902)	+	(AC)n	Simple_repeat	1	40	(0)	3942423
12	22.5	2.7	0.0	chr8	103498788	103498824	(41639812)	+	(CCCGC)n	Simple_repeat	1	38	(0)	3942424
14	9.7	5.7	2.7	chr8	104466965	104466999	(40671637)	+	G-rich	Low_complexity	1	37	(0)	3943763
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
1357	21.3	4.0	4.4	chr8	112882137	112882707	(32255929)	+	MER4CL34	LTR/ERV1	1	872	(0)	3955404
15	20.6	0.0	2.4	chr8	116874649	116874689	(28263947)	+	G-rich	Low_complexity	1	41	(0)	3960760
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
11	24.5	4.9	3.1	chr8	119856107	119856167	(25282469)	+	(GATCCCC)n	Simple_repeat	1	64	(0)	3965498
279	29.9	11.2	2.8	chr8	119856225	119856403	(25282233)	C	MIRb	SINE/MIR	(35)	233	38	3965499
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
311	18.8	5.9	0.0	chr8	123157591	123157654	(21980982)	C	L2b	LINE/L2	(15)	3360	3293	3971277
22	22.0	0.0	0.0	chr8	123157699	123157742	(21980894)	+	(AC)n	Simple_repeat	1	44	(0)	3971278
2548	6.6	0.0	0.0	chr8	123241663	123241949	(21896687)	+	AluSp	SINE/Alu	1	287	(26)	3971460
16	17.7	0.0	2.5	chr8	123768660	123768699	(21369937)	+	(GGCCGC)n	Simple_repeat	1	40	(0)	3972547
2184	11.6	1.4	0.0	chr8	124196722	124197013	(20941623)	C	AluSx	SINE/Alu	(16)	296	1	3973268
303	35.4	5.3	0.0	chr8	124539424	124539621	(20599015)	+	MIRb	SINE/MIR	48	256	(12)	3973889
1267	21.4	4.4	6.7	chr8	126409912	126410282	(18728354)	C	Arthur1C	DNA/hAT-Tip100	(1)	362	1	3977418
301	26.5	14.9	5.1	chr8	126410283	126410296	(18728340)	C	L2c	LINE/L2	(150)	3237	3226	3977417
63	0.0	0.0	0.0	chr8	126410297	126410350	(18728286)	+	(GT)n	Simple_repeat	1	54	(0)	3977419
301	26.5	14.9	5.1	chr8	126410351	126410509	(18728127)	C	L2c	LINE/L2	(162)	3225	3031	3977417
12	13.9	0.0	0.0	chr8	126557172	126557195	(18581441)	+	(GGC)n	Simple_repeat	1	24	(0)	3977737
13	24.1	1.7	5.0	chr8	126558530	126558588	(18580048)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	3977739
553	32.4	1.9	1.4	chr8	127043767	127043976	(18094660)	+	MIR	SINE/MIR	18	228	(34)	3978653
16475	9.1	0.1	0.0	chr8	127044007	127046320	(18092316)	+	L1PA7	LINE/L1	3012	5327	(819)	3978654
358	32.9	13.4	3.4	chr8	127822645	127823026	(17315610)	C	L2b	LINE/L2	(219)	3156	2738	3980181
412	35.1	2.3	1.8	chr8	127854910	127855080	(17283556)	C	MIR	SINE/MIR	(77)	185	14	3980251
19	7.2	3.5	0.0	chr8	127855098	127855126	(17283510)	+	(TC)n	Simple_repeat	1	30	(0)	3980252
688	30.0	8.0	0.2	chr8	131391894	131392126	(13746510)	C	MIR	SINE/MIR	(8)	254	1	3986765
40	4.9	0.0	0.0	chr8	131392252	131392294	(13746342)	+	(CA)n	Simple_repeat	1	43	(0)	3986766
205	33.0	5.2	6.0	chr8	131392520	131392635	(13746001)	C	OldhAT1	DNA/hAT-Ac	(2586)	262	148	3986767
19	10.8	0.0	6.5	chr8	131904178	131904223	(13234413)	+	(CCCTTCG)n	Simple_repeat	1	46	(0)	3987615
194	31.4	7.4	2.8	chr8	131904500	131904640	(13233996)	C	MIRc	SINE/MIR	(120)	148	1	3987616
12	19.3	4.7	2.2	chr8	133296243	133296285	(11842351)	+	G-rich	Low_complexity	1	45	(0)	3990148
46	2.3	0.0	0.0	chr8	133296689	133296732	(11841904)	+	(AC)n	Simple_repeat	1	44	(0)	3990149
12	20.4	2.4	2.4	chr8	134831774	134831814	(10306822)	+	(CCCGAC)n	Simple_repeat	1	42	(0)	3992944
14	18.0	8.6	1.6	chr8	134832022	134832079	(10306557)	+	(CGCCCCAG)n	Simple_repeat	1	63	(0)	3992945
424	28.1	6.1	13.2	chr8	139896363	139896628	(5242008)	C	MIRb	SINE/MIR	(4)	264	19	4001042
16	28.8	0.0	0.0	chr8	141128444	141128494	(4010142)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4003235
39	45.2	3.0	0.0	chr8	141271805	141272099	(3866537)	+	(CA)n	Simple_repeat	1	304	(0)	4003403
357	31.8	10.5	2.4	chr8	141309188	141309395	(3829241)	+	MIR	SINE/MIR	1	224	(38)	4003446
1554	22.0	9.1	1.2	chr8	141309409	141309980	(3828656)	+	L1ME3A	LINE/L1	5471	6121	(52)	4003447
1571	29.8	19.6	2.7	chr8	141515349	141516712	(3621924)	+	L2b	LINE/L2	670	2367	(1052)	4003731
298	24.0	2.6	5.1	chr8	141516957	141517035	(3621601)	+	L2a	LINE/L2	3337	3413	(13)	4003733
139	27.7	0.5	0.3	chr8	141701846	141702228	(3436408)	+	(GTGTGT)n	Simple_repeat	1	385	(0)	4004020
1768	30.4	5.0	5.1	chr8	141887982	141889587	(3249049)	+	L1ME3Cz	LINE/L1	4037	5636	(666)	4004264
769	25.6	1.7	0.4	chr8	141889611	141889838	(3248798)	C	MER20B	DNA/hAT-Charlie	(31)	752	522	4004265
213	31.7	7.9	0.0	chr8	142383649	142383730	(2754906)	C	MIRb	SINE/MIR	(15)	253	165	4004833
264	33.0	7.2	10.3	chr8	142383749	142384235	(2754401)	+	L1M7	LINE/L1	99	569	(5742)	4004834
222	22.6	1.6	4.6	chr8	142403694	142403758	(2734878)	C	MIRc	SINE/MIR	(118)	150	88	4004861
24	26.0	2.7	1.3	chr8	142456514	142456588	(2682048)	+	(CA)n	Simple_repeat	1	77	(0)	4004923
28	2.6	5.1	0.0	chr8	142469549	142469587	(2669049)	+	(GTGCATGTGT)n	Simple_repeat	1	41	(0)	4004940
205	29.4	9.7	1.9	chr8	142469809	142469912	(2668724)	C	MIRb	SINE/MIR	(128)	140	28	4004941
34	31.9	1.4	2.1	chr8	142470498	142470637	(2667999)	+	(GT)n	Simple_repeat	1	142	(0)	4004942
274	35.1	0.4	0.7	chr8	142808357	142809452	(2329184)	+	(TGTGTG)n	Simple_repeat	1	1100	(0)	4005328
12	16.7	5.9	0.0	chr8	143227790	143227823	(1910813)	+	(CCCTG)n	Simple_repeat	1	36	(0)	4005934
340	26.3	5.0	8.3	chr8	143281609	143281836	(1856800)	C	LTR50	LTR/ERVL	(509)	286	67	4006009
12	27.2	2.0	2.0	chr8	143541484	143541533	(1597103)	+	(GCGGA)n	Simple_repeat	1	51	(0)	4006298
218	33.7	0.0	0.0	chr8	143554051	143554139	(1584497)	C	L2	LINE/L2	(1500)	1919	1831	4006327
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
1151	13.5	2.6	2.1	chr8	143635497	143635688	(1502948)	+	AluJb	SINE/Alu	115	307	(5)	4006433
33	0.0	0.0	0.0	chr8	143952182	143952209	(1186427)	+	(AC)n	Simple_repeat	1	28	(0)	4006869
13	20.3	0.0	0.0	chr8	143952210	143952239	(1186397)	+	(GCAC)n	Simple_repeat	1	30	(0)	4006870
13	15.3	5.3	2.5	chr8	144050463	144050500	(1088136)	+	GA-rich	Low_complexity	1	40	(0)	4007031
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
26	0.0	0.0	0.0	chr8	144327559	144327583	(811053)	+	(GAGGGC)n	Simple_repeat	1	25	(0)	4007453
11	23.9	7.4	0.0	chr8	144358704	144358757	(779879)	+	G-rich	Low_complexity	1	58	(0)	4007510
2640	3.9	0.0	0.0	chr8	144428784	144429088	(709548)	C	AluY	SINE/Alu	(6)	305	1	4007614
17	18.6	1.9	5.5	chr8	144517574	144517627	(621009)	+	(CGC)n	Simple_repeat	1	55	(0)	4007700
15	20.6	3.9	1.9	chr8	144518167	144518218	(620418)	+	G-rich	Low_complexity	1	54	(0)	4007701
12	15.1	0.0	9.1	chr8	144527045	144527088	(611548)	+	(CGCCCG)n	Simple_repeat	1	44	(0)	4007707
12	18.0	0.0	7.0	chr8	144685250	144685292	(453344)	+	(CACACT)n	Simple_repeat	1	43	(0)	4007917
1485	22.2	2.9	8.8	chr8	144762132	144762428	(376208)	C	MER66D	LTR/ERV1	(214)	420	19	4008056
221	24.7	10.8	1.1	chr8	144901812	144901987	(236649)	+	L2a	LINE/L2	2962	3156	(270)	4008270
51	0.0	0.0	0.0	chr9	840725	840768	(137553949)	+	(GT)n	Simple_repeat	1	44	(0)	4009856
389	16.7	7.2	1.1	chr9	840770	840860	(137553857)	C	L1ME2	LINE/L1	(9)	6155	6059	4009857
14	27.9	2.9	2.9	chr9	841955	842022	(137552695)	+	(GGC)n	Simple_repeat	1	70	(0)	4009858
444	18.9	1.0	1.0	chr9	982046	982141	(137412576)	+	MER53	DNA/hAT	98	193	(0)	4010083
20	16.7	2.5	0.0	chr9	2017375	2017414	(136377303)	+	(GT)n	Simple_repeat	1	41	(0)	4011562
20	18.9	2.4	0.0	chr9	2017521	2017562	(136377155)	+	(GT)n	Simple_repeat	1	43	(0)	4011563
18	23.9	1.9	0.0	chr9	2017563	2017574	(136377143)	+	(GTGTGC)n	Simple_repeat	1	55	(0)	4011564
24	31.9	0.0	1.2	chr9	3525641	3525723	(134868994)	+	(CA)n	Simple_repeat	1	83	(0)	4013733
31	12.9	3.4	0.0	chr9	3525764	3525843	(134868874)	+	GA-rich	Low_complexity	1	82	(0)	4013734
34	9.2	0.0	0.0	chr9	3525927	3526019	(134868698)	+	(AG)n	Simple_repeat	1	93	(0)	4013735
15	16.3	0.0	2.8	chr9	4299650	4299685	(134095032)	+	(GGCGGA)n	Simple_repeat	1	36	(0)	4014805
46	0.0	0.0	0.0	chr9	4300209	4300247	(134094470)	+	(CA)n	Simple_repeat	1	39	(0)	4014806
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
34	5.3	0.0	0.0	chr9	8858086	8858125	(129536592)	+	(CTC)n	Simple_repeat	1	40	(0)	4021669
14	24.8	0.0	2.2	chr9	8858177	8858222	(129536495)	+	(CTTTCCT)n	Simple_repeat	1	46	(0)	4021670
19	19.6	0.0	0.0	chr9	12775843	12775883	(125618834)	+	(GCG)n	Simple_repeat	1	41	(0)	4026707
15	28.1	0.0	0.0	chr9	12775864	12775907	(125618810)	+	(GCA)n	Simple_repeat	1	44	(0)	4026708
13	23.9	0.0	2.4	chr9	12775911	12775951	(125618766)	+	(CCT)n	Simple_repeat	1	41	(0)	4026709
251	27.5	3.6	6.8	chr9	14237537	14237681	(124157036)	C	MIR	SINE/MIR	(16)	214	74	4028695
61	0.0	0.0	0.0	chr9	14237764	14237815	(124156902)	+	(GT)n	Simple_repeat	1	52	(0)	4028696
56	0.0	0.0	0.0	chr9	14237843	14237890	(124156827)	+	(GT)n	Simple_repeat	1	48	(0)	4028696
511	30.1	13.9	3.4	chr9	14237900	14238315	(124156402)	C	L2a	LINE/L2	(50)	3376	2910	4028697
27	20.8	1.8	0.0	chr9	14322297	14322353	(124072364)	+	(GT)n	Simple_repeat	1	58	(0)	4028795
12	24.1	0.0	0.0	chr9	14322573	14322606	(124072111)	+	(CGCCC)n	Simple_repeat	1	34	(0)	4028796
71	36.0	1.6	0.3	chr9	14910476	14910788	(123483929)	+	(CA)n	Simple_repeat	1	318	(0)	4029620
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
14	13.7	3.1	0.0	chr9	15511251	15511282	(122883435)	+	(TGTGTA)n	Simple_repeat	1	33	(0)	4030659
336	27.7	1.7	8.7	chr9	16154644	16154896	(122239821)	C	UCON51	LTR?	(14)	236	2	4031534
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
227	26.1	17.1	0.0	chr9	19102338	19102429	(119292288)	+	L2c	LINE/L2	3258	3368	(19)	4035562
207	21.9	0.0	0.0	chr9	19102397	19102437	(119292280)	+	MIR	SINE/MIR	217	257	(5)	4035563
16	21.5	0.0	2.2	chr9	19789097	19789141	(118605576)	+	(CTGTGCG)n	Simple_repeat	1	45	(0)	4036889
16	13.9	2.3	4.5	chr9	20622066	20622108	(117772609)	+	G-rich	Low_complexity	1	44	(0)	4038137
17	4.3	0.0	0.0	chr9	20622409	20622432	(117772285)	+	(CGCT)n	Simple_repeat	1	24	(0)	4038138
18	7.8	0.0	0.0	chr9	20622452	20622478	(117772239)	+	(AGC)n	Simple_repeat	1	27	(0)	4038139
15	22.0	1.7	5.1	chr9	20622547	20622604	(117772113)	+	G-rich	Low_complexity	1	59	(0)	4038140
13	29.4	1.3	5.3	chr9	21335468	21335551	(117059166)	+	G-rich	Low_complexity	1	80	(0)	4039097
16	4.5	0.0	0.0	chr9	23821697	23821719	(114572998)	+	(GGC)n	Simple_repeat	1	23	(0)	4042332
19	6.5	3.1	0.0	chr9	23821748	23821779	(114572938)	+	(CCGCG)n	Simple_repeat	1	33	(0)	4042333
22	24.5	3.2	4.1	chr9	23831279	23831374	(114563343)	+	(CCTC)n	Simple_repeat	1	95	(0)	4042338
2292	6.3	0.3	0.7	chr9	33000832	33001146	(105393571)	C	AluSp	SINE/Alu	(0)	313	1	4054570
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
28	2.9	2.9	0.0	chr9	33817125	33817159	(104577558)	+	(CCCT)n	Simple_repeat	1	36	(0)	4056031
13	25.3	6.0	1.4	chr9	33817376	33817399	(104577318)	+	(CCCCCT)n	Simple_repeat	1	69	(0)	4056032
13	20.4	2.4	2.4	chr9	33817400	33817440	(104577277)	+	(CCT)n	Simple_repeat	1	42	(0)	4056033
12	24.7	1.4	8.1	chr9	34380815	34380887	(104013830)	+	(GGCGG)n	Simple_repeat	1	74	(0)	4057338
15	10.0	9.4	0.0	chr9	34577823	34577854	(103816863)	+	GA-rich	Low_complexity	1	35	(0)	4057627
25	10.0	3.4	4.9	chr9	34577915	34577980	(103816737)	+	(GGCG)n	Simple_repeat	1	64	(0)	4057628
31	26.9	5.4	1.9	chr9	34578248	34578304	(103816413)	+	(GCGA)n	Simple_repeat	3	156	(0)	4057630
14	6.0	11.4	0.0	chr9	34637661	34637695	(103757022)	+	(CGGCCCA)n	Simple_repeat	1	39	(0)	4057709
12	19.3	6.1	5.7	chr9	34637696	34637723	(103756994)	+	(GCACGGC)n	Simple_repeat	4	70	(0)	4057710
248	35.5	11.8	4.4	chr9	34637992	34638404	(103756313)	C	L2c	LINE/L2	(27)	3360	2913	4057711
20	3.8	0.0	0.0	chr9	35490117	35490143	(102904574)	+	(CGC)n	Simple_repeat	1	27	(0)	4058939
791	29.7	4.2	4.8	chr9	35603505	35603961	(102790756)	C	Charlie29a	DNA/hAT-Charlie	(211)	508	55	4059151
305	33.5	12.2	0.0	chr9	35676506	35676678	(102718039)	C	L2c	LINE/L2	(0)	3387	3179	4059281
84	21.9	0.0	0.0	chr9	36842976	36843155	(101551562)	+	(GTGTGT)n	Simple_repeat	1	180	(0)	4061563
235	20.8	0.0	0.0	chr9	36843479	36843526	(101551191)	C	MIRc	SINE/MIR	(105)	163	116	4061564
1092	28.6	6.0	4.3	chr9	36843563	36844114	(101550603)	+	MLT1N2	LTR/ERVL-MaLR	1	562	(0)	4061565
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
1219	8.5	0.0	2.4	chr9	37592779	37592942	(100801775)	+	AluSx	SINE/Alu	125	284	(28)	4062992
17	9.1	2.6	5.0	chr9	37785063	37785101	(100609616)	+	(CCGCTT)n	Simple_repeat	1	40	(0)	4063381
14	16.4	5.8	3.6	chr9	38424241	38424292	(99970425)	+	G-rich	Low_complexity	1	55	(0)	4064578
28	15.5	0.0	0.0	chr9	38424359	38424409	(99970308)	+	(CAG)n	Simple_repeat	1	51	(0)	4064579
13	19.7	1.6	8.1	chr9	38424451	38424511	(99970206)	+	(CTCCG)n	Simple_repeat	1	62	(0)	4064580
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
17	13.2	0.0	2.9	chr9	68780223	68780257	(69614460)	+	(CGG)n	Simple_repeat	1	35	(0)	4080421
353	27.8	10.6	1.4	chr9	69422156	69422301	(68972416)	+	MIR3	SINE/MIR	18	178	(30)	4081590
33	7.5	0.0	0.0	chr9	69422486	69422527	(68972190)	+	(GT)n	Simple_repeat	1	42	(0)	4081591
421	23.8	14.9	5.1	chr9	69422555	69422771	(68971946)	+	L2a	LINE/L2	2946	3187	(239)	4081592
268	8.5	0.0	2.1	chr9	69422809	69422856	(68971861)	C	L1MB3	LINE/L1	(7)	6176	6130	4081593
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
14	22.6	5.1	4.8	chr9	71910514	71910592	(66484125)	+	(CGCTCCC)n	Simple_repeat	1	83	(0)	4085497
16	20.0	2.5	0.0	chr9	71910975	71911014	(66483703)	+	(CCG)n	Simple_repeat	1	41	(0)	4085498
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
3483	5.1	0.2	0.7	chr9	74085583	74086032	(64308685)	+	LTR7	LTR/ERV1	1	448	(2)	4088921
16	4.5	0.0	0.0	chr9	74498818	74498840	(63895877)	+	(GGC)n	Simple_repeat	1	23	(0)	4089483
17	16.4	0.0	0.0	chr9	75028093	75028126	(63366591)	+	(GCC)n	Simple_repeat	1	34	(0)	4090399
26	0.0	0.0	0.0	chr9	75088217	75088241	(63306476)	+	(GGGGC)n	Simple_repeat	1	25	(0)	4090518
633	18.5	4.2	0.0	chr9	75358872	75359006	(63035711)	C	MER5A	DNA/hAT-Charlie	(2)	187	47	4090867
338	28.1	8.3	8.8	chr9	75359037	75359192	(63035525)	+	LTR16A1	LTR/ERVL	50	197	(259)	4090868
4017	12.2	2.8	3.0	chr9	75359193	75359827	(63034890)	C	MER41B	LTR/ERV1	(0)	634	1	4090869
6353	14.0	1.7	5.7	chr9	77128201	77128876	(61265841)	C	MSTA-int	LTR/ERVL-MaLR	(518)	1133	476	4093793
409	37.8	0.9	0.0	chr9	80410246	80410462	(57984255)	C	UCON89	DNA/hAT?	(23)	219	1	4098566
2134	12.1	0.7	0.7	chr9	80411738	80412045	(57982672)	+	MSTA	LTR/ERVL-MaLR	1	308	(120)	4098572
49	2.2	0.0	0.0	chr9	80412179	80412224	(57982493)	+	(TG)n	Simple_repeat	1	46	(0)	4098573
33	12.8	0.0	0.0	chr9	80412225	80412275	(57982442)	+	(AG)n	Simple_repeat	1	51	(0)	4098574
330	21.0	11.8	9.3	chr9	81689313	81689527	(56705190)	C	MER52D	LTR/ERV1	(1852)	271	51	4100305
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
14	9.3	0.0	0.0	chr9	83707680	83707702	(54687015)	+	(GGC)n	Simple_repeat	1	23	(0)	4103350
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
330	32.1	0.0	0.9	chr9	85522335	85522441	(52872276)	C	MLT1J	LTR/ERVL-MaLR	(307)	205	100	4106320
35	25.6	0.0	0.0	chr9	85522477	85522554	(52872163)	+	(AC)n	Simple_repeat	1	78	(0)	4106321
23852	7.3	1.0	0.6	chr9	85717680	85723818	(52670899)	C	L1PA6	LINE/L1	(0)	6327	178	4106622
14	18.5	0.0	0.0	chr9	85941188	85941218	(52453499)	+	(GGC)n	Simple_repeat	1	31	(0)	4107037
14	15.3	0.0	0.0	chr9	85941551	85941579	(52453138)	+	G-rich	Low_complexity	1	29	(0)	4107038
2464	7.9	0.0	0.3	chr9	87407467	87407771	(50986946)	C	AluY	SINE/Alu	(7)	304	1	4109426
397	23.0	0.0	0.0	chr9	87407786	87407859	(50986858)	+	MER5A1	DNA/hAT-Charlie	2	75	(91)	4109427
1149	19.4	1.5	0.5	chr9	87407862	87408062	(50986655)	+	AluJr	SINE/Alu	1	203	(109)	4109428
2361	9.9	0.0	0.3	chr9	87421444	87421746	(50972971)	C	AluSx	SINE/Alu	(6)	306	5	4109448
342	20.2	2.7	11.4	chr9	87421747	87421817	(50972900)	C	LTR16A2	LTR/ERVL	(51)	444	382	4109447
343	30.6	7.5	4.2	chr9	87421818	87422295	(50972422)	+	L2c	LINE/L2	2893	3387	(0)	4109449
17	12.0	2.6	2.6	chr9	88388281	88388318	(50006399)	+	(GCCCC)n	Simple_repeat	1	39	(0)	4111077
17	21.0	6.0	4.5	chr9	88388310	88388393	(50006324)	+	(CAGTGCG)n	Simple_repeat	1	89	(0)	4111078
1333	12.4	5.0	5.0	chr9	90433726	90434023	(47960694)	+	MER1B	DNA/hAT-Charlie	1	298	(41)	4113818
4611	17.6	3.9	1.6	chr9	92096531	92097851	(46296866)	+	L1MB7	LINE/L1	4826	6181	(3)	4116190
281	17.0	0.0	0.0	chr9	92097864	92097916	(46296801)	+	L1MB7	LINE/L1	6119	6171	(13)	4116191
401	13.2	9.8	3.5	chr9	92097938	92098023	(46296694)	C	Charlie5	DNA/hAT-Charlie	(511)	2113	2022	4116192
3631	4.1	3.6	0.0	chr9	92098027	92098485	(46296232)	+	HERV-Fc1_LTR3	LTR/ERV1	1	476	(0)	4116193
2548	5.3	0.3	0.0	chr9	92115681	92115979	(46278738)	C	AluSp	SINE/Alu	(13)	300	1	4116218
255	29.7	11.9	1.7	chr9	92670393	92670512	(45724205)	+	MIRc	SINE/MIR	37	170	(92)	4117046
2766	18.6	13.8	0.5	chr9	92992509	92993141	(45401576)	C	L1MA5A	LINE/L1	(6058)	1508	778	4117514
13	13.2	6.1	0.0	chr9	93566861	93566893	(44827824)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	4118315
89	30.1	0.4	1.1	chr9	93917542	93917813	(44476904)	+	(TG)n	Simple_repeat	1	273	(0)	4118750
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
2295	8.2	1.0	0.0	chr9	95427219	95427512	(42967205)	+	AluSz	SINE/Alu	7	303	(9)	4121216
2946	8.7	2.9	0.9	chr9	95427551	95427990	(42966727)	+	L1MA1	LINE/L1	5854	6302	(0)	4121217
16	5.2	0.0	0.0	chr9	95495936	95495955	(42898762)	+	(GT)n	Simple_repeat	1	20	(0)	4121290
12	26.0	2.1	2.0	chr9	95507770	95507817	(42886900)	+	G-rich	Low_complexity	1	49	(0)	4121302
23	3.7	0.0	0.0	chr9	95507906	95507933	(42886784)	+	(AC)n	Simple_repeat	1	28	(0)	4121303
28	24.6	0.0	0.0	chr9	95508033	95508095	(42886622)	+	(GT)n	Simple_repeat	1	63	(0)	4121304
452	24.4	17.9	3.9	chr9	95876251	95876455	(42518262)	+	MIR	SINE/MIR	17	256	(6)	4121894
18	3.3	6.5	0.0	chr9	96654925	96654955	(41739762)	+	(CCTCGC)n	Simple_repeat	1	33	(0)	4123268
2425	6.2	0.7	0.0	chr9	97237799	97238071	(41156646)	C	AluSg4	SINE/Alu	(35)	275	1	4124187
11	11.1	6.9	0.0	chr9	97387579	97387607	(41007110)	+	(CCCTGC)n	Simple_repeat	1	31	(0)	4124445
27	12.0	0.0	0.0	chr9	97412046	97412091	(40982626)	+	(GCGGG)n	Simple_repeat	1	46	(0)	4124478
16	14.9	2.6	2.5	chr9	97412150	97412188	(40982529)	+	(GGC)n	Simple_repeat	1	40	(0)	4124479
16	18.4	7.0	1.6	chr9	98056577	98056633	(40338084)	+	(CCCCG)n	Simple_repeat	1	61	(0)	4125692
14	0.0	0.0	0.0	chr9	98056747	98056764	(40337953)	+	(GGC)n	Simple_repeat	1	18	(0)	4125693
13	8.5	0.0	3.7	chr9	98056971	98056997	(40337720)	+	(CGGGG)n	Simple_repeat	1	27	(0)	4125694
245	25.4	12.4	2.1	chr9	98192315	98192467	(40202250)	C	MIR3	SINE/MIR	(76)	192	17	4126033
13	18.9	0.0	0.0	chr9	98192569	98192598	(40202119)	+	(GCG)n	Simple_repeat	1	30	(0)	4126034
986	18.1	0.0	0.0	chr9	98218693	98218847	(40175870)	C	AluSx3	SINE/Alu	(14)	297	143	4126096
386	32.3	4.2	3.1	chr9	98710153	98710315	(39684402)	C	MIRb	SINE/MIR	(49)	219	55	4127049
2060	15.7	0.8	7.1	chr9	98797099	98797523	(39597194)	C	L1PA16	LINE/L1	(4)	6162	5765	4127214
192	34.2	2.5	2.5	chr9	98974888	98974968	(39419749)	+	MIR3	SINE/MIR	17	97	(111)	4127622
16472	10.6	1.9	1.5	chr9	100143009	100146113	(38248604)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	4129636
2637	8.4	9.6	0.5	chr9	100146116	100146522	(38248195)	C	LTR7	LTR/ERV1	(2)	448	1	4129636
30	23.5	0.0	0.0	chr9	101028886	101028950	(37365767)	+	(CA)n	Simple_repeat	1	65	(0)	4131062
15	11.7	0.0	0.0	chr9	104747886	104747913	(33646804)	+	(GAGGG)n	Simple_repeat	1	28	(0)	4136198
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
20	24.4	2.6	3.8	chr9	105656220	105656297	(32738420)	+	(GGC)n	Simple_repeat	1	80	(0)	4137861
36	0.0	0.0	0.0	chr9	109318151	109318181	(29076536)	+	(GT)n	Simple_repeat	1	31	(0)	4144246
14	13.1	9.1	2.1	chr9	109318625	109318668	(29076049)	+	(CCT)n	Simple_repeat	1	48	(0)	4144247
12	28.1	1.7	3.3	chr9	111525290	111525348	(26869369)	+	G-rich	Low_complexity	1	60	(0)	4148038
14	3.7	10.7	0.0	chr9	111525365	111525392	(26869325)	+	(GCT)n	Simple_repeat	1	31	(0)	4148039
712	21.8	1.6	10.1	chr9	111525455	111525663	(26869054)	C	MER20	DNA/hAT-Charlie	(12)	207	17	4148040
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
16	18.3	3.8	3.6	chr9	111661809	111661861	(26732856)	+	(CGGTGG)n	Simple_repeat	1	55	(0)	4148308
211	26.4	9.4	0.6	chr9	111662070	111662225	(26732492)	C	L2	LINE/L2	(802)	2617	2447	4148309
21	25.2	1.4	2.7	chr9	111897052	111897125	(26497592)	+	(CCCTC)n	Simple_repeat	1	75	(0)	4148756
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
2126	8.2	2.3	3.6	chr9	113339729	113340034	(25054683)	C	AluSx	SINE/Alu	(10)	302	1	4151455
15	9.4	5.6	2.6	chr9	114504708	114504743	(23889974)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	4153793
851	12.0	0.8	0.8	chr9	114610940	114611064	(23783653)	+	AluJr	SINE/Alu	1	125	(187)	4154051
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
206	25.1	0.0	0.0	chr9	120715023	120715079	(17679638)	C	MIR1_Amn	SINE/MIR	(90)	178	122	4165551
368	23.9	5.0	11.8	chr9	120715321	120715472	(17679245)	+	MIRb	SINE/MIR	120	260	(8)	4165552
11	13.9	2.0	10.0	chr9	120929026	120929074	(17465643)	+	G-rich	Low_complexity	1	50	(0)	4166014
23	22.3	3.0	5.9	chr9	121268064	121268162	(17126555)	+	(CCCG)n	Simple_repeat	1	102	(0)	4166636
234	30.9	9.3	1.4	chr9	121268696	121268833	(17125884)	C	L3	LINE/CR1	(186)	3913	3764	4166637
469	30.4	8.3	8.5	chr9	121279160	121279687	(17115030)	C	L2	LINE/L2	(411)	3008	2482	4166660
215	31.9	3.2	2.1	chr9	122226666	122226758	(16167959)	C	MIRb	SINE/MIR	(115)	153	60	4168585
193	25.4	1.5	5.6	chr9	122912997	122913067	(15481650)	+	L2b	LINE/L2	3303	3370	(5)	4169766
19	4.0	0.0	0.0	chr9	122913184	122913209	(15481508)	+	(TCC)n	Simple_repeat	1	26	(0)	4169767
24	30.5	1.7	3.3	chr9	124011383	124011501	(14383216)	+	(CTCCCTC)n	Simple_repeat	1	121	(0)	4171699
41	6.1	0.0	0.0	chr9	124011714	124011764	(14382953)	+	(CTC)n	Simple_repeat	1	51	(0)	4171700
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
21	19.2	3.9	1.9	chr9	124593403	124593454	(13801263)	+	GA-rich	Low_complexity	1	54	(0)	4172879
18	15.5	0.0	0.0	chr9	124862241	124862276	(13532441)	+	(ATTC)n	Simple_repeat	1	36	(0)	4173411
2288	6.9	0.3	5.3	chr9	124862507	124862825	(13531892)	C	AluSx	SINE/Alu	(9)	303	1	4173412
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
17	8.2	0.0	0.0	chr9	124869371	124869396	(13525321)	+	(GGC)n	Simple_repeat	1	26	(0)	4173431
26	20.9	0.0	0.0	chr9	125189733	125189788	(13204929)	+	(GCG)n	Simple_repeat	1	56	(0)	4174090
14	11.3	7.5	2.3	chr9	125261781	125261820	(13132897)	+	(GCGCTGC)n	Simple_repeat	1	43	(0)	4174296
12	26.4	5.3	5.0	chr9	125261805	125261899	(13132818)	+	(GCGGCA)n	Simple_repeat	1	100	(0)	4174297
15	12.0	0.0	0.0	chr9	125746549	125746575	(12648142)	+	(CGG)n	Simple_repeat	1	27	(0)	4175276
61	9.4	0.0	0.0	chr9	126082982	126083072	(12311645)	+	(TGTG)n	Simple_repeat	1	91	(0)	4175820
189	20.9	2.3	0.0	chr9	126348353	126348395	(12046322)	+	MIRb	SINE/MIR	193	236	(32)	4176299
349	29.6	8.6	3.5	chr9	126676108	126676457	(11718260)	+	L2a	LINE/L2	3000	3425	(1)	4176807
203	31.5	6.1	2.1	chr9	126676518	126676611	(11718106)	C	L2c	LINE/L2	(263)	3124	3027	4176812
441	29.4	4.0	0.2	chr9	126676624	126676823	(11717894)	+	MIR3	SINE/MIR	47	258	(10)	4176813
12	17.4	3.8	7.3	chr9	127397477	127397529	(10997188)	+	(GCC)n	Simple_repeat	1	55	(0)	4178130
200	30.9	4.7	1.2	chr9	127451080	127451161	(10943556)	C	MIR3	SINE/MIR	(43)	165	81	4178232
227	31.2	11.7	1.7	chr9	127585955	127586130	(10808587)	C	L2b	LINE/L2	(99)	3276	3081	4178555
83	17.7	0.0	0.0	chr9	127586150	127586297	(10808420)	+	(GT)n	Simple_repeat	1	148	(0)	4178556
520	26.6	14.1	1.5	chr9	127784762	127784983	(10609734)	+	MIRb	SINE/MIR	6	265	(3)	4179011
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
108	31.8	1.3	1.0	chr9	127865862	127866252	(10528465)	+	(TG)n	Simple_repeat	1	396	(0)	4179205
406	25.0	3.4	1.4	chr9	127866424	127866569	(10528148)	C	MER113	DNA/hAT-Charlie	(44)	477	329	4179206
395	30.8	5.2	7.1	chr9	127898571	127898766	(10495951)	C	MIRb	SINE/MIR	(36)	232	41	4179282
248	34.8	5.0	1.7	chr9	127926972	127927088	(10467629)	+	MIR3	SINE/MIR	25	145	(63)	4179352
229	32.3	8.7	3.2	chr9	127930409	127930556	(10464161)	C	MIR	SINE/MIR	(7)	261	92	4179358
236	19.2	4.0	0.0	chr9	128160659	128160716	(10234001)	C	MIR1_Amn	SINE/MIR	(84)	184	121	4179865
403	27.9	5.2	3.3	chr9	128161002	128161153	(10233564)	+	MIRb	SINE/MIR	114	268	(0)	4179856
13	19.4	0.0	2.7	chr9	128191414	128191450	(10203267)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	4179938
360	30.6	18.0	0.9	chr9	128365361	128365571	(10029146)	+	MIRb	SINE/MIR	3	257	(11)	4180351
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
196	29.7	10.3	1.5	chr9	128684299	128684493	(9710224)	+	L2	LINE/L2	2561	2774	(645)	4181090
12	18.5	0.0	7.1	chr9	128703050	128703091	(9691626)	+	(CCCTG)n	Simple_repeat	1	42	(0)	4181128
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
285	27.7	5.5	6.3	chr9	128819400	128819526	(9575191)	+	MIRb	SINE/MIR	114	239	(29)	4181405
2376	5.2	1.7	0.7	chr9	128887652	128887940	(9506777)	C	AluY	SINE/Alu	(18)	293	2	4181574
201	24.2	1.3	0.7	chr9	129027620	129027690	(9367027)	C	MIRc	SINE/MIR	(28)	180	109	4181909
36	24.4	3.7	4.7	chr9	129028160	129028322	(9366395)	+	(GCCC)n	Simple_repeat	1	169	(0)	4181910
399	31.0	2.3	0.3	chr9	129339514	129340956	(9053761)	+	(GT)n	Simple_repeat	1	1476	(0)	4182600
15	8.1	0.0	3.6	chr9	129437271	129437298	(8957419)	+	(GGAG)n	Simple_repeat	1	28	(0)	4182820
21	14.1	3.3	4.8	chr9	129488103	129488162	(8906555)	+	(CACACT)n	Simple_repeat	1	62	(0)	4182950
15	10.4	0.0	5.7	chr9	129488448	129488482	(8906235)	+	G-rich	Low_complexity	1	35	(0)	4182951
18	15.6	2.2	2.2	chr9	129557321	129557365	(8837352)	+	(CCTTCCT)n	Simple_repeat	1	46	(0)	4183124
14	20.2	0.0	10.1	chr9	129557775	129557843	(8836874)	+	(CCACCC)n	Simple_repeat	1	69	(0)	4183125
548	29.9	0.7	0.0	chr9	129575597	129575740	(8818977)	C	MIR	SINE/MIR	(98)	164	20	4183169
30	3.5	0.0	0.0	chr9	129576015	129576044	(8818673)	+	(AC)n	Simple_repeat	1	30	(0)	4183170
164	19.7	6.9	1.3	chr9	129576051	129576556	(8818161)	+	(ACTC)n	Simple_repeat	1	541	(0)	4183171
436	21.9	5.0	0.9	chr9	129718953	129719067	(8675650)	+	L2b	LINE/L2	3256	3375	(0)	4183480
695	23.5	2.6	9.8	chr9	129719516	129719704	(8675013)	+	MIR	SINE/MIR	22	194	(68)	4183481
2428	9.6	0.0	0.3	chr9	129889288	129889599	(8505118)	+	AluSx	SINE/Alu	1	311	(1)	4183837
18	25.9	1.9	1.9	chr9	129889859	129889911	(8504806)	+	(TG)n	Simple_repeat	1	54	(0)	4183838
20	21.3	4.9	3.5	chr9	130681524	130681604	(7713113)	+	(GCGCAC)n	Simple_repeat	1	85	(0)	4185574
1897	11.5	5.5	3.6	chr9	130950310	130950614	(7444103)	C	AluJo	SINE/Alu	(0)	312	2	4186076
629	27.1	7.3	3.4	chr9	130950895	130951158	(7443559)	+	LTR16C	LTR/ERVL	177	451	(38)	4186077
14	24.0	4.5	2.9	chr9	131096693	131096759	(7297958)	+	G-rich	Low_complexity	1	70	(0)	4186389
12	24.4	0.0	4.3	chr9	131096868	131096914	(7297803)	+	(GCGCCGC)n	Simple_repeat	1	47	(0)	4186390
17	16.3	3.2	6.2	chr9	131097001	131097062	(7297655)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	4186391
2341	8.9	0.3	0.0	chr9	131331627	131331917	(7062800)	+	AluSx	SINE/Alu	1	292	(20)	4186844
21	10.5	0.0	0.0	chr9	131762315	131762353	(6632364)	+	(CA)n	Simple_repeat	1	39	(0)	4187647
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
195	27.7	0.2	0.4	chr9	132459468	132459973	(5934744)	+	(TG)n	Simple_repeat	1	507	(0)	4188944
759	12.0	4.0	7.2	chr9	133031186	133031338	(5363379)	C	LTR10B	LTR/ERV1	(0)	547	400	4189956
1461	10.1	0.4	0.9	chr9	133031340	133031568	(5363149)	C	AluSx	SINE/Alu	(1)	311	84	4189957
184	34.2	16.3	1.7	chr9	133336544	133336778	(5057939)	C	L2a	LINE/L2	(23)	3403	3128	4190431
28	3.3	0.0	0.0	chr9	133356360	133356390	(5038327)	+	(CCCCGCA)n	Simple_repeat	1	31	(0)	4190457
11	18.2	6.3	6.0	chr9	133356404	133356466	(5038251)	+	(CCCAGC)n	Simple_repeat	1	67	(0)	4190458
51	22.3	0.6	5.0	chr9	133356682	133356841	(5037876)	+	G-rich	Low_complexity	1	161	(0)	4190459
20	8.8	7.7	3.6	chr9	133375984	133376035	(5018682)	+	(GCTC)n	Simple_repeat	1	56	(0)	4190476
432	28.1	12.6	1.5	chr9	133609631	133609826	(4784891)	+	MIRb	SINE/MIR	49	268	(0)	4190835
36	0.0	0.0	0.0	chr9	135253871	135253903	(3140814)	+	(ACCGCC)n	Simple_repeat	1	33	(0)	4192957
2052	4.5	0.0	0.0	chr9	135412345	135412586	(2982131)	+	L1PA4	LINE/L1	5911	6152	(3)	4193176
695	27.1	8.6	6.3	chr9	135413036	135413398	(2981319)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	1	4193177
24	16.1	2.0	0.0	chr9	135604946	135604995	(2789722)	+	GA-rich	Low_complexity	1	51	(0)	4193434
540	23.9	5.8	5.1	chr9	135650312	135650448	(2744269)	+	MER4B-int	LTR/ERV1	1029	1166	(5592)	4193496
112	24.6	2.1	0.3	chr9	135650466	135650750	(2743967)	+	(TG)n	Simple_repeat	1	291	(0)	4193497
1142	18.7	1.1	3.7	chr9	135650751	135651022	(2743695)	+	MER4-int	LTR/ERV1	846	1110	(7010)	4193498
29	0.0	0.0	0.0	chr9	135967784	135967808	(2426909)	+	(GT)n	Simple_repeat	1	25	(0)	4193861
76	36.3	0.9	2.1	chr9	135967825	135968156	(2426561)	+	(TG)n	Simple_repeat	1	335	(0)	4193862
354	9.4	0.0	1.5	chr9	135972326	135972390	(2422327)	C	L1MB3	LINE/L1	(7)	6176	6113	4193867
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
13	12.3	3.8	9.1	chr9	136118938	136118990	(2275727)	+	(GCCTGC)n	Simple_repeat	1	55	(0)	4194048
17	9.4	2.8	2.7	chr9	136205161	136205196	(2189521)	+	(CGCC)n	Simple_repeat	1	37	(0)	4194150
282	38.7	0.2	0.2	chr9	136293075	136294355	(2100362)	+	(CACA)n	Simple_repeat	1	1281	(0)	4194232
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
374	29.7	10.5	2.0	chr9	136409842	136410012	(1984705)	+	L2c	LINE/L2	3172	3385	(2)	4194342
203	22.3	0.0	2.0	chr9	136410153	136410213	(1984504)	C	L2c	LINE/L2	(58)	3329	3242	4194343
17	22.2	2.8	5.5	chr9	136439816	136439886	(1954831)	+	(GCCCC)n	Simple_repeat	1	73	(0)	4194378
292	32.6	14.0	0.0	chr9	136568086	136568392	(1826325)	+	L1MB5	LINE/L1	5818	6174	(0)	4194500
28	31.0	2.0	1.0	chr9	136586461	136586562	(1808155)	+	(GT)n	Simple_repeat	1	104	(0)	4194523
268	31.0	5.8	0.9	chr9	136587578	136587691	(1807026)	+	MIRb	SINE/MIR	106	225	(43)	4194524
16	16.5	0.0	0.0	chr9	136587972	136587998	(1806719)	+	G-rich	Low_complexity	1	27	(0)	4194525
186	39.1	0.2	0.8	chr9	136630737	136631565	(1763152)	+	(ACAC)n	Simple_repeat	1	831	(0)	4194567
445	29.6	9.7	1.6	chr9	136807190	136807501	(1587216)	C	MER74B	LTR/ERVL	(10)	612	273	4194829
16	11.2	0.0	0.0	chr9	136842722	136842750	(1551967)	+	(AGGCA)n	Simple_repeat	1	29	(0)	4194871
15	28.2	1.1	6.5	chr9	136848951	136849042	(1545675)	+	G-rich	Low_complexity	1	93	(0)	4194875
31	12.2	3.8	4.9	chr9	136849629	136849707	(1545010)	+	(GGCGG)n	Simple_repeat	1	82	(0)	4194876
22	24.5	1.6	8.0	chr9	136992378	136992500	(1402217)	+	(CCCGC)n	Simple_repeat	1	125	(0)	4195089
13	5.3	0.0	0.0	chr9	137087114	137087133	(1307584)	+	(CCG)n	Simple_repeat	1	20	(0)	4195210
12	19.5	2.1	6.2	chr9	137200755	137200801	(1193916)	+	(GCC)n	Simple_repeat	1	48	(0)	4195340
13	18.1	0.0	7.0	chr9	137240441	137240446	(1154271)	+	(GCCCC)n	Simple_repeat	1	13	(30)	4195375
17	7.9	0.0	0.0	chr9	137240447	137240473	(1154244)	+	(CCCCT)n	Simple_repeat	1	27	(0)	4195376
13	18.1	0.0	7.0	chr9	137240474	137240483	(1154234)	+	(GCCCC)n	Simple_repeat	14	43	(0)	4195375
13	0.0	0.0	0.0	chr9	137241341	137241357	(1153360)	+	(CCG)n	Simple_repeat	1	17	(0)	4195377
19	22.2	5.7	1.4	chr9	137241583	137241652	(1153065)	+	(GGCGG)n	Simple_repeat	1	74	(0)	4195378
183	29.7	3.0	0.0	chr9	137316617	137316680	(1078037)	C	L2c	LINE/L2	(232)	3155	3087	4195487
1191	28.3	7.9	3.3	chr9	137720603	137721133	(673584)	C	L1MD2	LINE/L1	(412)	5947	5386	4196078
220	31.4	5.3	8.2	chr9	137884525	137884659	(510058)	+	L2c	LINE/L2	3257	3387	(0)	4196281
37	28.1	4.0	3.9	chr9	137884857	137885062	(509655)	+	(CTCCCT)n	Simple_repeat	1	206	(0)	4196282
51	0.0	0.0	0.0	chrX	323548	323591	(155717304)	+	(GT)n	Simple_repeat	1	44	(0)	4358411
50	0.0	0.0	0.0	chrX	323681	323723	(155717172)	+	(TG)n	Simple_repeat	1	43	(0)	4358412
22	0.0	0.0	0.0	chrX	323811	323834	(155717061)	+	(GT)n	Simple_repeat	1	24	(0)	4358413
29	0.0	0.0	0.0	chrX	323924	323948	(155716947)	+	(TG)n	Simple_repeat	1	25	(0)	4358414
720	17.6	0.0	0.8	chrX	324369	324493	(155716402)	+	AluJo	SINE/Alu	1	124	(188)	4358415
2409	8.8	0.0	2.5	chrX	324494	324812	(155716083)	C	AluSx1	SINE/Alu	(1)	311	1	4358416
753	8.8	0.0	0.0	chrX	791227	791328	(155249567)	+	L1PA3	LINE/L1	6051	6152	(3)	4359391
23	9.8	0.0	0.0	chrX	791800	791832	(155249063)	+	(A)n	Simple_repeat	1	33	(0)	4359392
1128	6.7	0.0	0.0	chrX	792039	792172	(155248723)	+	AluSx	SINE/Alu	1	134	(178)	4359393
134	20.8	0.7	0.0	chrX	1106705	1106983	(154933912)	+	GA-rich	Low_complexity	1	281	(0)	4360134
22	7.2	0.0	0.0	chrX	1107074	1107102	(154933793)	+	(TG)n	Simple_repeat	1	29	(0)	4360135
126	41.0	0.4	4.8	chrX	1110187	1111126	(154929769)	+	(TGTG)n	Simple_repeat	1	944	(0)	4360147
2040	12.8	0.0	0.7	chrX	1206652	1206939	(154833956)	C	AluSq2	SINE/Alu	(22)	291	6	4360420
407	20.9	2.5	2.7	chrX	1354417	1355485	(154685410)	+	GA-rich	Low_complexity	1	1096	(0)	4360823
234	30.7	1.3	0.0	chrX	1418347	1418421	(154622474)	+	MLT1J	LTR/ERVL-MaLR	231	306	(206)	4360948
309	22.9	6.8	0.0	chrX	1418461	1418556	(154622339)	+	MLT1J	LTR/ERVL-MaLR	211	313	(199)	4360949
2181	15.0	0.0	0.0	chrX	2707051	2707356	(153333539)	+	AluSz6	SINE/Alu	4	309	(3)	4363417
24	14.5	2.5	8.4	chrX	9766021	9766101	(146274794)	+	GA-rich	Low_complexity	1	83	(0)	4375306
17	25.9	4.3	4.1	chrX	10014884	10014977	(146025918)	+	GA-rich	Low_complexity	1	98	(0)	4375803
15	8.8	0.0	0.0	chrX	21374132	21374155	(134666740)	+	(CGC)n	Simple_repeat	1	24	(0)	4394393
15	10.6	0.0	5.9	chrX	21839743	21839776	(134201119)	+	(GGT)n	Simple_repeat	1	34	(0)	4395016
446	29.3	5.3	14.5	chrX	24371719	24372117	(131668778)	C	LTR78B	LTR/ERV1	(919)	377	18	4399383
52	25.5	0.0	1.6	chrX	24372132	24372257	(131668638)	+	(CA)n	Simple_repeat	1	126	(0)	4399384
538	26.7	4.4	5.8	chrX	24372454	24372660	(131668235)	+	MamRep488	DNA/hAT-Tip100	16	219	(0)	4399385
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
26	13.2	2.0	0.0	chrX	40006391	40006440	(116034455)	+	(CCCTC)n	Simple_repeat	1	51	(0)	4421624
48	0.0	0.0	0.0	chrX	40014386	40014426	(116026469)	+	(GT)n	Simple_repeat	1	41	(0)	4421630
16	5.2	0.0	0.0	chrX	40014427	40014446	(116026449)	+	(CG)n	Simple_repeat	1	20	(0)	4421631
15	12.0	0.0	0.0	chrX	40735345	40735371	(115305524)	+	(CCG)n	Simple_repeat	1	27	(0)	4422996
13	26.0	1.9	1.9	chrX	40735602	40735653	(115305242)	+	G-rich	Low_complexity	1	53	(0)	4422997
14	25.2	3.5	1.7	chrX	41085233	41085290	(114955605)	+	G-rich	Low_complexity	1	60	(0)	4423642
34	12.3	0.0	0.0	chrX	41085363	41085417	(114955478)	+	(CGC)n	Simple_repeat	1	55	(0)	4423643
17088	7.9	1.6	1.3	chrX	46484680	46486516	(109554379)	C	L1PA6	LINE/L1	(4331)	1853	5	4432207
12	20.1	4.1	3.9	chrX	47619918	47619966	(108420929)	+	(CGCGG)n	Simple_repeat	1	51	(0)	4434536
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
13	3.7	10.7	0.0	chrX	49270485	49270512	(106770383)	+	(GCAGGA)n	Simple_repeat	1	31	(0)	4437813
1801	26.2	8.7	7.2	chrX	53071275	53071735	(102969160)	C	MER20B	DNA/hAT-Charlie	(265)	518	6	4442993
57	1.7	3.3	0.0	chrX	70931184	70931243	(85109652)	+	(AC)n	Simple_repeat	1	62	(0)	4460428
47	0.0	0.0	0.0	chrX	70931501	70931540	(85109355)	+	(GT)n	Simple_repeat	1	40	(0)	4460429
31	13.7	6.0	0.0	chrX	71146104	71146153	(84894742)	+	(CT)n	Simple_repeat	1	52	(0)	4460882
75	1.5	0.0	0.0	chrX	71146154	71146221	(84894674)	+	(CA)n	Simple_repeat	1	68	(0)	4460883
31	13.7	6.0	0.0	chrX	71146222	71146237	(84894658)	+	(CT)n	Simple_repeat	1	18	(0)	4460884
31	34.6	1.6	0.0	chrX	71146349	71146475	(84894420)	+	(TG)n	Simple_repeat	1	129	(0)	4460885
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
12	13.6	6.8	4.3	chrX	74924493	74924536	(81116359)	+	(CCATGC)n	Simple_repeat	1	47	(0)	4466272
15	17.7	3.1	0.0	chrX	107450494	107450525	(48590370)	+	(CA)n	Simple_repeat	1	33	(0)	4504184
47	0.0	0.0	0.0	chrX	107450563	107450602	(48590293)	+	(CA)n	Simple_repeat	1	40	(0)	4504184
16	9.3	0.0	0.0	chrX	107450603	107450625	(48590270)	+	(GA)n	Simple_repeat	1	23	(0)	4504185
27	11.7	2.1	0.0	chrX	107673123	107673170	(48367725)	+	(GTGT)n	Simple_repeat	1	49	(0)	4504615
137	19.4	3.0	0.0	chrX	153901424	153901722	(2139173)	+	(CA)n	Simple_repeat	1	308	(0)	4570916
16	11.7	0.0	0.0	chrX	153925915	153925942	(2114953)	+	(AAGG)n	Simple_repeat	1	28	(0)	4570953
17	31.3	2.0	3.9	chrX	154397618	154397718	(1643177)	+	G-rich	Low_complexity	1	103	(0)	4571791
22	3.6	0.0	0.0	chrX	154428788	154428816	(1612079)	+	(GGC)n	Simple_repeat	1	29	(0)	4571851