14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
15	23.1	1.9	3.6	chr1	1599531	1599584	(247356838)	+	(GGC)n	Simple_repeat	1	55	(0)	2034
15	27.4	5.0	3.6	chr1	1599643	1599722	(247356700)	+	(GC)n	Simple_repeat	1	84	(0)	2035
24	29.7	2.1	1.0	chr1	2546203	2546298	(246410124)	+	G-rich	Low_complexity	1	98	(0)	3307
18	17.9	3.7	3.6	chr1	2546378	2546431	(246409991)	+	(CGC)n	Simple_repeat	1	56	(0)	3308
16	3.3	0.0	10.0	chr1	3796670	3796691	(245159731)	+	(GGGTG)n	Simple_repeat	1	19	(0)	4362
4056	13.3	0.5	8.9	chr1	3796692	3797417	(245159005)	C	MER4A	LTR/ERV1	(0)	664	1	4363
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
228	17.0	0.0	4.1	chr1	6208675	6208723	(242747699)	+	MIRc	SINE/MIR	106	152	(116)	7836
12	13.7	2.8	5.4	chr1	6209039	6209074	(242747348)	+	G-rich	Low_complexity	1	37	(0)	7837
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
19	28.8	1.5	0.0	chr1	6418908	6418974	(242537448)	+	G-rich	Low_complexity	1	68	(0)	8198
17	16.1	3.9	3.7	chr1	6602163	6602214	(242354208)	+	(GCGGC)n	Simple_repeat	1	54	(0)	8522
353	25.7	8.4	5.5	chr1	7075272	7075477	(241880945)	C	MER112	DNA/hAT-Charlie	(35)	226	15	9358
2328	11.0	0.0	0.0	chr1	7075663	7075962	(241880460)	C	AluSx	SINE/Alu	(12)	300	1	9359
2353	8.2	0.3	0.3	chr1	7225092	7225383	(241731039)	C	AluY	SINE/Alu	(19)	292	1	9563
14	16.2	0.0	0.0	chr1	7771353	7771380	(241185042)	+	(CGC)n	Simple_repeat	1	28	(0)	10295
38	0.0	0.0	0.0	chr1	7942207	7942241	(241014181)	+	(GGA)n	Simple_repeat	1	35	(0)	10611
387	27.6	6.7	6.4	chr1	7942786	7942956	(241013466)	+	MIRb	SINE/MIR	59	238	(30)	10612
12	13.7	0.0	0.0	chr1	7961691	7961714	(240994708)	+	(GCGT)n	Simple_repeat	1	24	(0)	10655
15	8.2	12.7	3.2	chr1	8879289	8879343	(240077079)	+	(CGCCTG)n	Simple_repeat	1	62	(0)	12447
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
39	11.9	0.0	0.0	chr1	10794135	10794199	(238162223)	+	(GT)n	Simple_repeat	1	65	(0)	16349
68	23.8	1.8	6.6	chr1	11272907	11273190	(237683232)	+	(CCGCC)n	Simple_repeat	1	289	(0)	17351
2658	3.9	0.0	0.3	chr1	11635643	11635949	(237320473)	C	AluY	SINE/Alu	(5)	306	1	18121
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
14	21.9	2.3	2.2	chr1	11934781	11934824	(237021598)	+	(TGC)n	Simple_repeat	1	45	(0)	18777
273	28.3	13.1	0.0	chr1	11934934	11935085	(237021337)	+	MIR3	SINE/MIR	13	187	(21)	18778
16	21.0	1.4	7.1	chr1	15153699	15153767	(233802655)	+	(CCGCCTC)n	Simple_repeat	1	70	(0)	24655
620	24.8	10.3	4.0	chr1	15527392	15527622	(233428800)	C	MIRb	SINE/MIR	(0)	268	4	25474
15	5.6	0.0	0.0	chr1	15834460	15834478	(233121944)	+	(T)n	Simple_repeat	1	19	(0)	26169
17	28.6	1.4	2.8	chr1	16155967	16156037	(232800385)	+	(GCCC)n	Simple_repeat	1	72	(0)	26799
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
329	33.9	5.9	1.5	chr1	17661898	17662092	(231294330)	+	MIRb	SINE/MIR	6	209	(59)	29948
607	28.6	4.2	4.7	chr1	17831876	17832066	(231124356)	+	MIRb	SINE/MIR	15	204	(58)	30317
621	32.2	9.4	6.1	chr1	18255653	18256379	(230700043)	+	L2c	LINE/L2	2525	3285	(102)	31254
298	27.9	9.2	3.0	chr1	18419847	18419979	(230536443)	C	MIRc	SINE/MIR	(78)	152	11	31610
3188	17.8	11.0	2.6	chr1	18419989	18420652	(230535770)	C	LTR8A	LTR/ERV1	(0)	727	1	31611
12	22.5	2.3	2.3	chr1	20343348	20343390	(228613032)	+	(CGCGAG)n	Simple_repeat	1	44	(0)	35571
789	26.1	21.5	1.0	chr1	20507357	20507665	(228448757)	+	L2a	LINE/L2	3037	3426	(0)	35927
380	32.0	3.2	0.8	chr1	21648172	21648294	(227308128)	C	MIR3	SINE/MIR	(62)	146	21	38377
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
183	37.7	0.0	4.2	chr1	21783997	21784068	(227172354)	+	MIR1_Amn	SINE/MIR	34	102	(128)	38658
787	16.3	0.0	5.7	chr1	23673000	23673140	(225283282)	+	FLAM_C	SINE/Alu	3	135	(8)	43064
288	30.6	0.7	9.3	chr1	23673141	23673208	(225283214)	C	L1M5	LINE/L1	(496)	5628	5563	43063
401	26.9	19.3	2.0	chr1	23673238	23673484	(225282938)	C	L2a	LINE/L2	(14)	3412	3113	43065
464	31.3	6.9	0.9	chr1	23799997	23800215	(225156207)	C	MIRb	SINE/MIR	(13)	255	23	43389
16	22.0	1.5	6.1	chr1	23800233	23800297	(225156125)	+	(CCCCCG)n	Simple_repeat	1	66	(0)	43390
24	17.9	1.4	5.6	chr1	24745451	24745520	(224210902)	+	(CAG)n	Simple_repeat	1	71	(0)	45644
252	25.0	1.6	0.0	chr1	24909468	24909527	(224046895)	+	MIRc	SINE/MIR	123	183	(85)	45975
17	27.8	0.0	0.0	chr1	25246598	25246649	(223709773)	+	G-rich	Low_complexity	1	52	(0)	46694
16	0.0	0.0	4.2	chr1	25906067	25906090	(223050332)	+	(AGGG)n	Simple_repeat	1	24	(0)	48069
241	32.0	10.3	0.0	chr1	26035535	26035656	(222920766)	+	L2c	LINE/L2	3030	3165	(222)	48399
660	22.6	6.1	0.1	chr1	27007201	27007388	(221949034)	C	MIR	SINE/MIR	(0)	268	49	50679
2282	9.0	2.0	0.0	chr1	27007393	27007681	(221948741)	C	AluSg4	SINE/Alu	(13)	297	3	50680
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
17	5.2	0.0	14.6	chr1	27725927	27725981	(221230441)	+	(GCCC)n	Simple_repeat	1	55	(0)	52395
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
1722	8.1	2.3	3.1	chr1	28511977	28512235	(220444187)	C	AluSx1	SINE/Alu	(10)	302	46	54388
2238	8.8	0.3	0.0	chr1	28514480	28514776	(220441646)	+	AluSp	SINE/Alu	1	298	(15)	54397
488	10.0	3.6	4.8	chr1	28514783	28514866	(220441556)	+	Alu	SINE/Alu	1	83	(228)	54398
268	21.2	5.9	2.4	chr1	28514895	28514976	(220441446)	C	L1MEc	LINE/L1	(4368)	2032	1948	54389
1926	12.2	0.3	4.3	chr1	28514997	28515300	(220441122)	+	AluSx	SINE/Alu	2	293	(19)	54399
17	7.3	3.0	5.9	chr1	28812783	28812815	(220143607)	+	(TG)n	Simple_repeat	1	34	(0)	55209
16725	17.9	2.5	1.9	chr1	29377930	29380337	(219576085)	C	L1MA4	LINE/L1	(3898)	3667	1239	56484
494	24.5	11.6	2.6	chr1	29736413	29736593	(219219829)	C	MIR3	SINE/MIR	(10)	198	3	57193
556	23.9	5.0	4.6	chr1	29974899	29975085	(218981337)	C	MIR3	SINE/MIR	(27)	181	1	57616
355	28.5	12.7	1.2	chr1	29975407	29975573	(218980849)	C	L1ME1	LINE/L1	(1)	6178	5990	57617
48	0.0	0.0	0.0	chr1	30858945	30858985	(218097437)	+	(CA)n	Simple_repeat	1	41	(0)	59245
315	30.9	5.3	1.6	chr1	30859109	30859236	(218097186)	C	L2b	LINE/L2	(5)	3370	3238	59246
278	33.6	2.4	3.2	chr1	31644234	31644359	(217312063)	+	MIR3	SINE/MIR	36	160	(48)	61084
1049	20.2	6.6	2.6	chr1	31723488	31723792	(217232630)	+	MER33	DNA/hAT-Charlie	1	318	(6)	61212
391	28.4	1.7	2.5	chr1	31724024	31724142	(217232280)	C	MIRc	SINE/MIR	(41)	227	110	61213
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
18	16.6	2.0	3.9	chr1	32361673	32361723	(216594699)	+	G-rich	Low_complexity	1	52	(0)	62708
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
556	22.9	8.1	2.3	chr1	34860116	34860289	(214096133)	+	MIRb	SINE/MIR	84	268	(0)	67557
39	32.2	0.0	0.0	chr1	35192740	35192869	(213763553)	+	(GCG)n	Simple_repeat	1	130	(0)	68203
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
43	4.5	0.0	0.0	chr1	35661187	35661232	(213295190)	+	(TG)n	Simple_repeat	1	46	(0)	69172
2056	11.8	1.0	2.0	chr1	35661234	35661537	(213294885)	C	AluJr	SINE/Alu	(9)	303	3	69173
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
12	20.1	1.9	7.4	chr1	36178832	36178884	(212777538)	+	(GGCG)n	Simple_repeat	1	54	(0)	70292
13	20.8	2.1	4.1	chr1	36321239	36321286	(212635136)	+	(GGCCTG)n	Simple_repeat	1	49	(0)	70645
182	33.3	0.0	0.0	chr1	36385410	36385460	(212570962)	+	MIRb	SINE/MIR	55	105	(163)	70746
465	27.5	16.3	0.9	chr1	36398030	36398345	(212558077)	C	L2a	LINE/L2	(1)	3425	3052	70782
7043	15.9	6.1	3.6	chr1	36400551	36401780	(212554642)	C	LTR2752	LTR/ERV1	(0)	1263	1	70791
438	24.0	18.6	1.0	chr1	36450757	36450962	(212505460)	+	MIRb	SINE/MIR	3	260	(8)	70904
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
13	22.0	4.8	0.0	chr1	38046030	38046071	(210910351)	+	(GCC)n	Simple_repeat	1	44	(0)	73970
275	32.6	2.1	0.0	chr1	38076052	38076146	(210880276)	+	MIR3	SINE/MIR	82	178	(30)	74035
269	34.0	3.6	0.0	chr1	38076336	38076441	(210879981)	C	MIRb	SINE/MIR	(6)	262	153	74036
18	11.2	0.0	0.0	chr1	38270715	38270744	(210685678)	+	(GCA)n	Simple_repeat	1	30	(0)	74401
420	32.5	8.4	6.7	chr1	38432284	38432310	(210524112)	+	L3	LINE/CR1	3725	3751	(348)	74653
2353	11.6	0.0	0.0	chr1	38432311	38432620	(210523802)	+	AluSz	SINE/Alu	1	310	(2)	74654
20	29.3	0.0	2.6	chr1	39788923	39789000	(209167422)	+	G-rich	Low_complexity	1	78	(0)	77403
13	20.1	2.0	5.8	chr1	39789020	39789070	(209167352)	+	G-rich	Low_complexity	1	52	(0)	77403
13	17.4	5.3	5.0	chr1	42334856	42334912	(206621510)	+	(AGGCCCC)n	Simple_repeat	1	60	(0)	82309
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
197	25.8	4.6	0.0	chr1	42767696	42767757	(206188665)	C	MIRc	SINE/MIR	(76)	192	128	83111
13	13.2	6.1	0.0	chr1	44031405	44031437	(204924985)	+	(GCCGC)n	Simple_repeat	1	35	(0)	85307
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
412	30.3	16.1	0.8	chr1	50279808	50280070	(198676352)	+	L2b	LINE/L2	3055	3365	(10)	96466
539	29.4	9.3	1.4	chr1	50280281	50280487	(198675935)	+	MIRc	SINE/MIR	17	241	(27)	96467
13	15.2	2.5	4.9	chr1	52365969	52366008	(196590414)	+	(CCGCG)n	Simple_repeat	1	41	(0)	100699
224	26.8	0.0	0.0	chr1	52404101	52404156	(196552266)	+	L2a	LINE/L2	3371	3426	(0)	100775
859	28.7	10.0	4.4	chr1	52697872	52697999	(196258423)	+	L2a	LINE/L2	3247	3371	(55)	101487
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
22195	10.5	2.0	0.7	chr1	53810764	53814071	(195142351)	+	L1PB1	LINE/L1	255	3647	(3215)	103813
22	11.9	0.0	0.0	chr1	55039870	55039906	(193916516)	+	(GCT)n	Simple_repeat	1	37	(0)	106404
189	24.2	5.7	0.0	chr1	55040106	55040171	(193916251)	+	MIR3	SINE/MIR	109	178	(30)	106405
19	16.7	3.4	4.9	chr1	56645326	56645384	(192311038)	+	(GGC)n	Simple_repeat	1	61	(0)	109245
18	26.9	1.4	2.8	chr1	56645567	56645637	(192310785)	+	G-rich	Low_complexity	1	72	(0)	109246
409	14.9	11.3	5.0	chr1	57966916	57967014	(190989408)	+	L1MB1	LINE/L1	6062	6167	(1)	111891
19	10.4	0.0	0.0	chr1	58577094	58577124	(190379298)	+	(CAG)n	Simple_repeat	1	31	(0)	113109
14	15.5	0.0	9.6	chr1	62195023	62195074	(186761348)	+	G-rich	Low_complexity	1	52	(0)	119697
2512	5.2	0.0	0.0	chr1	62211684	62211972	(186744450)	+	AluY	SINE/Alu	1	289	(22)	119749
701	14.8	3.4	0.9	chr1	62212136	62212250	(186744172)	+	AluJb	SINE/Alu	16	133	(179)	119750
2048	12.6	0.3	1.4	chr1	62212938	62213230	(186743192)	+	AluSx1	SINE/Alu	1	290	(22)	119752
988	23.9	3.2	3.6	chr1	62213270	62213521	(186742901)	+	MLT1C	LTR/ERVL-MaLR	217	467	(0)	119753
22	20.2	7.4	1.1	chr1	63523647	63523727	(185432695)	+	(TCTCTG)n	Simple_repeat	1	87	(0)	122201
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
35	2.8	0.0	0.0	chr1	76868592	76868628	(172087794)	+	(GCA)n	Simple_repeat	1	37	(0)	142078
9083	10.4	9.1	4.2	chr1	77221806	77223304	(171733118)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	142528
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
18	7.7	0.0	0.0	chr1	77888599	77888626	(171067796)	+	(CGG)n	Simple_repeat	1	28	(0)	143695
709	30.4	8.3	11.4	chr1	85465554	85466028	(163490394)	C	L3	LINE/CR1	(160)	3939	3481	154199
16264	8.1	1.1	0.3	chr1	90997571	91000000	(157956422)	+	L1P1	LINE/L1	1	2450	(3696)	162079
59	0.0	0.0	0.0	chr1	92831758	92831810	(156124612)	+	(AACAA)n	Simple_repeat	1	53	(0)	165195
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
23	18.2	5.7	4.3	chr1	93449064	93449151	(155507271)	+	(CCTTT)n	Simple_repeat	1	93	(0)	166316
407	30.4	7.2	2.9	chr1	93449552	93449724	(155506698)	C	L3	LINE/CR1	(12)	4087	3907	166317
16	8.5	0.0	0.0	chr1	94926230	94926254	(154030168)	+	(AGC)n	Simple_repeat	1	25	(0)	168515
16	8.6	7.5	2.3	chr1	98048583	98048622	(150907800)	+	(CCTCCAC)n	Simple_repeat	1	43	(0)	172871
201	30.0	4.3	6.2	chr1	100037817	100037912	(148918510)	+	MIRb	SINE/MIR	96	189	(79)	175849
14	18.3	5.7	3.6	chr1	100539548	100539600	(148416822)	+	(GCT)n	Simple_repeat	1	56	(0)	176730
12	12.6	3.7	0.0	chr1	107056667	107056693	(141899729)	+	(CCGCG)n	Simple_repeat	1	28	(0)	184892
2169	9.9	0.0	0.3	chr1	109241040	109241322	(139715100)	+	AluSx	SINE/Alu	22	303	(9)	188289
17	26.1	0.0	0.0	chr1	110211731	110211776	(138744646)	+	(GGC)n	Simple_repeat	1	46	(0)	189744
13	13.1	0.0	0.0	chr1	110674560	110674584	(138281838)	+	(CGC)n	Simple_repeat	1	25	(0)	190556
354	28.9	7.7	6.2	chr1	111739965	111740156	(137216266)	C	L2a	LINE/L2	(26)	3400	3206	191993
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
14	19.8	2.4	2.3	chr1	119711884	119711925	(129244497)	+	GA-rich	Low_complexity	1	43	(0)	204433
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
18	14.2	0.0	6.5	chr1	145996795	145996840	(102959582)	+	GA-rich	Low_complexity	1	46	(0)	211892
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
262	23.3	1.9	9.5	chr1	148403014	148403129	(100553293)	+	AluSz	SINE/Alu	16	122	(190)	215663
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
312	22.4	1.6	11.2	chr1	149637049	149637182	(99319240)	+	AluSz	SINE/Alu	2	122	(190)	217502
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
20	25.3	4.3	0.0	chr1	151612252	151612321	(97344101)	+	(CGG)n	Simple_repeat	1	73	(0)	221596
37	0.0	0.0	0.0	chr1	153355743	153355776	(95600646)	+	(TGGCTGC)n	Simple_repeat	1	34	(0)	223952
213	29.7	0.0	7.2	chr1	153355878	153355946	(95600476)	C	L2c	LINE/L2	(0)	3426	3363	223953
295	11.8	0.0	0.0	chr1	153422594	153422644	(95533778)	C	Alu	SINE/Alu	(10)	291	241	224042
26	22.2	3.8	1.2	chr1	153775501	153775580	(95180842)	+	(GCT)n	Simple_repeat	1	83	(0)	224742
321	26.6	3.1	3.9	chr1	153966966	153967094	(94989328)	+	MIRc	SINE/MIR	124	251	(17)	225150
13	8.7	4.0	0.0	chr1	154502729	154502753	(94453669)	+	(CCACT)n	Simple_repeat	1	26	(0)	226305
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
24	30.1	0.0	3.9	chr1	155051198	155051301	(93905121)	+	G-rich	Low_complexity	1	104	(0)	227264
21	29.7	0.0	1.5	chr1	155079757	155079823	(93876599)	+	(GT)n	Simple_repeat	1	67	(0)	227305
500	19.5	2.3	3.0	chr1	155140262	155140393	(93816029)	+	L1M1	LINE/L1	325	455	(7110)	227424
2392	5.6	0.3	0.3	chr1	155194029	155194314	(93762108)	+	AluSg4	SINE/Alu	6	291	(19)	227524
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
30	25.3	3.2	0.0	chr1	156652289	156652382	(92304040)	+	GA-rich	Low_complexity	1	97	(0)	230526
19	23.8	0.0	0.0	chr1	156728593	156728641	(92227781)	+	(GCG)n	Simple_repeat	1	49	(0)	230643
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
215	27.3	3.0	1.5	chr1	156752099	156752165	(92204257)	C	L2c	LINE/L2	(1)	3374	3307	230675
291	24.7	4.0	0.0	chr1	156752541	156752613	(92203809)	C	L2c	LINE/L2	(222)	3165	3090	230675
238	32.4	3.9	0.0	chr1	156752610	156752683	(92203739)	C	MIRc	SINE/MIR	(144)	124	48	230676
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
350	29.6	8.5	0.9	chr1	162056296	162056404	(86900018)	+	MIR3	SINE/MIR	17	134	(134)	238530
294	10.9	0.0	0.0	chr1	162056411	162056456	(86899966)	C	MADE1	DNA/TcMar-Mariner	(34)	46	1	238531
15	0.0	0.0	4.3	chr1	169485720	169485742	(79470680)	+	(GCC)n	Simple_repeat	1	23	(0)	250009
1432	23.5	18.1	5.9	chr1	171644992	171645650	(77310772)	+	LTR41B	LTR/ERVL	1	757	(1)	253080
262	30.9	8.4	1.3	chr1	171742512	171742665	(77213757)	C	MIR3	SINE/MIR	(11)	197	32	253261
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
281	26.0	3.7	1.9	chr1	179087686	179087791	(69868631)	C	MER5A	DNA/hAT-Charlie	(3)	186	79	264120
1979	12.4	0.0	0.0	chr1	179088227	179088492	(69867930)	+	AluSz	SINE/Alu	2	267	(45)	264121
14	23.1	1.9	3.6	chr1	180229384	180229437	(68726985)	+	G-rich	Low_complexity	1	55	(0)	266081
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
279	34.2	3.9	4.3	chr1	184663769	184663976	(64292446)	+	MIRb	SINE/MIR	26	232	(36)	273013
21	22.2	1.3	5.3	chr1	185317244	185317318	(63639104)	+	(GCC)n	Simple_repeat	1	76	(0)	274052
18	9.3	0.0	7.3	chr1	185317384	185317424	(63638998)	+	(GCCCC)n	Simple_repeat	1	41	(0)	274053
18926	6.6	1.3	0.2	chr1	187007107	187009596	(61946826)	+	PABL_A-int	LTR/ERV1	2499	5015	(0)	276435
4937	8.9	0.6	0.0	chr1	187009601	187010252	(61946170)	+	PABL_A	LTR/ERV1	5	660	(0)	276435
15	7.6	3.6	0.0	chr1	197902930	197902957	(51053465)	+	(CCCGC)n	Simple_repeat	1	29	(0)	290519
15	15.0	0.0	0.0	chr1	200038813	200038842	(48917580)	+	G-rich	Low_complexity	1	30	(0)	293529
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
13	0.0	0.0	0.0	chr1	200873648	200873664	(48082758)	+	(TGC)n	Simple_repeat	1	17	(0)	295136
329	28.6	3.8	7.2	chr1	201309567	201309732	(47646690)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3652	295814
450	25.3	10.6	0.5	chr1	201309738	201309909	(47646513)	+	MER20B	DNA/hAT-Charlie	32	219	(0)	295815
749	6.8	0.0	3.7	chr1	202692991	202693097	(46263325)	C	L1PB1	LINE/L1	(1)	6150	6048	298322
15	20.0	1.5	7.5	chr1	202808003	202808068	(46148354)	+	(CCCGCCC)n	Simple_repeat	1	67	(0)	298519
337	27.6	7.1	0.0	chr1	205458879	205458983	(43497439)	C	MIRb	SINE/MIR	(57)	211	99	303465
354	26.7	3.1	0.0	chr1	205459299	205459390	(43497032)	+	MIRb	SINE/MIR	99	197	(71)	303466
21	8.8	0.0	2.6	chr1	209937687	209937724	(39018698)	+	(CAAAA)n	Simple_repeat	1	38	(0)	310410
25	10.7	3.9	1.9	chr1	209937987	209938038	(39018384)	+	(GGTGG)n	Simple_repeat	1	54	(0)	310411
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
19	22.4	4.8	0.0	chr1	211578138	211578199	(37378223)	+	(GGCCGT)n	Simple_repeat	1	65	(0)	312973
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	17.1	2.4	2.4	chr1	212858391	212858431	(36097991)	+	G-rich	Low_complexity	1	42	(0)	315328
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
15	11.6	0.0	3.3	chr1	213051371	213051400	(35905022)	+	(GGC)n	Simple_repeat	1	30	(0)	315638
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
19	0.0	0.0	0.0	chr1	226939206	226939226	(22017196)	+	(A)n	Simple_repeat	1	21	(0)	336728
227	23.6	7.7	0.0	chr1	226939238	226939309	(22017113)	C	Charlie18a	DNA/hAT-Charlie	(191)	151	74	336729
35	27.5	4.0	1.9	chr1	228378431	228378580	(20577842)	+	(CCCCT)n	Simple_repeat	1	156	(0)	338615
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
1561	17.9	1.6	4.7	chr1	229430487	229430805	(19525617)	+	AluJr	SINE/Alu	3	311	(1)	340254
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
13	13.1	4.1	7.8	chr1	233328323	233328376	(15628046)	+	(CCGC)n	Simple_repeat	1	51	(0)	346215
12	25.8	3.1	4.5	chr1	233328482	233328546	(15627876)	+	(GCGGCGC)n	Simple_repeat	1	67	(0)	346216
15	10.1	9.4	0.0	chr1	233328690	233328721	(15627701)	+	(CG)n	Simple_repeat	1	35	(0)	346217
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
17	26.6	4.7	4.5	chr1	239386846	239386952	(9569470)	+	(GGCCGC)n	Simple_repeat	1	112	(0)	356036
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
6469	10.8	2.3	1.1	chr1	246970918	246971859	(1984563)	C	LTR13_	LTR/ERVK	(0)	954	1	368450
3270	16.2	4.7	2.8	chr1	248863250	248863895	(92527)	+	MER52A	LTR/ERV1	1	659	(1096)	370901
12	6.3	8.1	5.0	chr1	248906545	248906581	(49841)	+	(GAGGCCG)n	Simple_repeat	1	40	(0)	370979
181	28.1	8.1	0.0	chr10	1326511	1326567	(132470855)	+	MIR3	SINE/MIR	62	123	(85)	372481
17	29.0	1.7	0.0	chr10	1326598	1326656	(132470766)	+	GA-rich	Low_complexity	1	60	(0)	372482
239	30.8	7.9	0.8	chr10	3162635	3162752	(130634670)	+	L1MC5a	LINE/L1	2119	2245	(532)	374689
466	30.0	15.6	0.7	chr10	3162871	3163159	(130634263)	+	L1MC5a	LINE/L1	2423	2629	(148)	374692
21	0.0	7.5	4.7	chr10	4826284	4826323	(128971099)	+	(GCG)n	Simple_repeat	1	43	(0)	376971
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
13	9.2	2.4	9.3	chr10	6163681	6163722	(127633700)	+	G-rich	Low_complexity	1	43	(0)	379017
11	30.9	0.0	0.0	chr10	8043684	8043727	(125753695)	+	(GGAGGCG)n	Simple_repeat	1	44	(0)	382050
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
77	25.2	3.3	6.1	chr10	15168719	15169113	(118628309)	+	(CGCCC)n	Simple_repeat	1	408	(0)	393755
18	8.8	2.5	4.9	chr10	17617404	17617443	(116179979)	+	(CCCCG)n	Simple_repeat	1	41	(0)	397753
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
18	12.4	2.9	0.0	chr10	27252554	27252588	(106544834)	+	(GCC)n	Simple_repeat	1	36	(0)	413154
18	3.9	7.4	0.0	chr10	27252597	27252625	(106544797)	+	(GT)n	Simple_repeat	1	31	(0)	413155
13	13.5	4.3	6.2	chr10	27252856	27252901	(106544521)	+	(GCGCCGG)n	Simple_repeat	1	48	(0)	413156
13	18.5	7.0	0.0	chr10	27745612	27745654	(106051768)	+	G-rich	Low_complexity	1	46	(0)	413919
22	17.9	6.2	1.4	chr10	31928527	31928591	(101868831)	+	(CCG)n	Simple_repeat	1	69	(0)	420990
23	9.7	0.0	0.0	chr10	32055519	32055551	(101741871)	+	(CA)n	Simple_repeat	1	33	(0)	421234
17	16.7	2.4	2.3	chr10	32056201	32056242	(101741180)	+	(GGC)n	Simple_repeat	1	43	(0)	421235
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
17	4.3	0.0	0.0	chr10	35090268	35090291	(98707131)	+	(GGC)n	Simple_repeat	1	24	(0)	425943
37	27.4	3.7	4.1	chr10	35640753	35640941	(98156481)	+	(GCC)n	Simple_repeat	1	196	(0)	426868
27	16.4	5.6	4.3	chr10	35640872	35640960	(98156462)	+	(CGG)n	Simple_repeat	1	94	(0)	426869
1828	12.9	1.0	6.1	chr10	42782007	42782317	(91015105)	C	AluJo	SINE/Alu	(17)	295	1	432544
21	12.1	0.0	0.0	chr10	43077275	43077323	(90720099)	+	(GCT)n	Simple_repeat	1	49	(0)	432927
16	10.8	0.0	10.2	chr10	43104742	43104790	(90692632)	+	A-rich	Low_complexity	1	49	(0)	432959
2338	8.8	0.0	0.0	chr10	43284027	43284334	(90513088)	+	AluSx	SINE/Alu	2	309	(3)	433183
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
2327	6.0	0.7	1.0	chr10	43455012	43455310	(90342112)	C	AluY	SINE/Alu	(13)	298	1	433565
19	15.9	2.4	0.0	chr10	43648829	43648870	(90148552)	+	(GCCGGC)n	Simple_repeat	1	43	(0)	433924
24	20.4	3.5	4.5	chr10	45001106	45001191	(88796231)	+	G-rich	Low_complexity	1	89	(0)	435515
761	14.9	6.1	2.1	chr10	45419602	45419742	(88377680)	+	AluJb	SINE/Alu	140	286	(26)	436037
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
224	18.5	2.0	0.8	chr10	45673228	45673289	(88124133)	+	MIRb	SINE/MIR	103	163	(105)	436410
12	24.7	4.4	4.2	chr10	46556178	46556245	(87241177)	+	G-rich	Low_complexity	1	71	(0)	437854
11	24.3	4.0	1.9	chr10	46556353	46556402	(87241020)	+	G-rich	Low_complexity	1	52	(0)	437855
306	25.8	0.0	6.1	chr10	49762596	49762694	(84034728)	+	MIRb	SINE/MIR	130	222	(46)	442268
14	34.1	0.0	0.0	chr10	51074669	51074730	(82722692)	+	(GAGCTG)n	Simple_repeat	1	62	(0)	444311
15	30.4	0.0	0.0	chr10	59176503	59176546	(74620876)	+	(CG)n	Simple_repeat	1	44	(0)	455189
19	12.8	0.0	0.0	chr10	59709884	59709917	(74087505)	+	(AGG)n	Simple_repeat	1	34	(0)	455972
13	27.4	0.0	6.2	chr10	59709957	59710020	(74087402)	+	(CCCGG)n	Simple_repeat	1	64	(0)	455973
17	3.6	0.0	6.2	chr10	62818491	62818522	(70978900)	+	(AAGA)n	Simple_repeat	1	32	(0)	460646
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
246	28.3	2.8	5.4	chr10	69452071	69452182	(64345240)	+	MIRc	SINE/MIR	32	140	(128)	471632
2526	7.4	0.7	0.0	chr10	69508162	69508470	(64288952)	+	AluSx3	SINE/Alu	1	311	(0)	471749
13	5.3	0.0	0.0	chr10	71217131	71217150	(62580272)	+	(TCC)n	Simple_repeat	1	20	(0)	474808
427	27.3	4.5	0.8	chr10	71581909	71582037	(62215385)	+	MIRc	SINE/MIR	24	157	(111)	475534
183	23.7	0.0	0.0	chr10	71582171	71582208	(62215214)	+	MIR	SINE/MIR	3	40	(222)	475535
1472	16.9	5.2	1.1	chr10	71582216	71582533	(62214889)	+	MER33	DNA/hAT-Charlie	1	315	(9)	475536
17	10.7	4.5	4.3	chr10	72260962	72261005	(61536417)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	476891
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
13	19.0	0.0	5.0	chr10	78303451	78303490	(55493932)	+	(CCGC)n	Simple_repeat	1	40	(0)	487572
15	16.1	0.0	0.0	chr10	81876092	81876120	(51921302)	+	(CCT)n	Simple_repeat	1	29	(0)	493158
577	31.6	6.6	6.6	chr10	83917275	83917593	(49879829)	C	L1M6	LINE/L1	(4639)	1857	1539	496015
498	28.0	4.4	0.0	chr10	86203794	86203968	(47593454)	C	MER117	DNA/hAT-Charlie	(8)	189	7	499138
1067	26.2	14.3	5.5	chr10	89700368	89701065	(44096357)	C	L1MC4	LINE/L1	(32)	8010	7203	504844
301	26.5	12.6	0.8	chr10	93496848	93496980	(40300442)	C	MIRb	SINE/MIR	(24)	244	94	511238
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
192	26.8	5.3	2.7	chr10	97445353	97445425	(36351997)	C	L2b	LINE/L2	(422)	3004	2930	518008
16	8.1	0.0	0.0	chr10	97445454	97445479	(36351943)	+	(GCTGG)n	Simple_repeat	1	26	(0)	518009
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
14	18.2	0.0	0.0	chr10	97737144	97737174	(36060248)	+	(GCG)n	Simple_repeat	1	31	(0)	518629
12	20.1	7.5	1.8	chr10	99329299	99329351	(34468071)	+	(CTCCGG)n	Simple_repeat	1	57	(0)	521275
18	14.0	0.0	0.0	chr10	99329390	99329421	(34468001)	+	(GGC)n	Simple_repeat	1	32	(0)	521276
11	27.7	0.0	2.2	chr10	99329484	99329528	(34467894)	+	(CCCCGGC)n	Simple_repeat	1	45	(0)	521277
930	22.3	5.1	2.2	chr10	100325060	100325288	(33472134)	C	MER106A	DNA/hAT-Charlie	(0)	236	1	523159
386	23.3	11.9	4.3	chr10	100680702	100680840	(33116582)	+	MIRb	SINE/MIR	102	252	(16)	523795
18	23.5	6.1	0.0	chr10	101080978	101081043	(32716379)	+	GA-rich	Low_complexity	1	70	(0)	524442
343	26.5	11.1	2.2	chr10	102064962	102065085	(31732337)	+	L2a	LINE/L2	3287	3426	(0)	526214
334	32.5	6.1	5.5	chr10	102399784	102399946	(31397476)	+	MIR	SINE/MIR	27	190	(72)	526858
12	15.8	0.0	11.3	chr10	102421525	102421577	(31375845)	+	(GCCCC)n	Simple_repeat	1	53	(0)	526882
20	6.7	0.0	3.0	chr10	102714290	102714322	(31083100)	+	(CCT)n	Simple_repeat	1	33	(0)	527438
181	35.1	3.4	0.0	chr10	103265812	103265868	(30531554)	+	L3b	LINE/CR1	5162	5220	(12)	528553
22	20.4	1.7	1.7	chr10	103266040	103266098	(30531324)	+	GA-rich	Low_complexity	1	60	(0)	528554
36	0.0	0.0	0.0	chr10	103278904	103278934	(30518488)	+	(CA)n	Simple_repeat	1	31	(0)	528588
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
15	20.3	5.9	0.0	chr10	103368447	103368497	(30428925)	+	(CCTCGGCC)n	Simple_repeat	1	54	(0)	528834
2366	9.4	0.0	0.0	chr10	103907847	103908144	(29889278)	+	AluSz	SINE/Alu	1	298	(14)	529878
13	21.2	9.8	3.0	chr10	104231968	104232059	(29565363)	+	G-rich	Low_complexity	1	101	(0)	530386
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
14	30.7	0.0	0.0	chr10	110008207	110008254	(23789168)	+	(GGC)n	Simple_repeat	1	48	(0)	538775
21	15.9	0.0	0.0	chr10	114173880	114173921	(19623501)	+	(CTCGCC)n	Simple_repeat	1	42	(0)	545512
21	24.2	1.7	0.0	chr10	114179474	114179533	(19617889)	+	G-rich	Low_complexity	1	61	(0)	545520
19	10.0	0.0	0.0	chr10	119818781	119818812	(13978610)	+	(GACG)n	Simple_repeat	1	32	(0)	554648
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
2384	6.0	0.4	0.0	chr10	123659216	123659496	(10137926)	C	AluSq2	SINE/Alu	(31)	282	1	560700
524	25.1	10.1	0.6	chr10	127556742	127556921	(6240501)	C	L2a	LINE/L2	(413)	3006	2808	566325
21	23.9	0.0	4.3	chr10	128126376	128126444	(5670978)	+	(CCGC)n	Simple_repeat	1	69	(0)	567033
21	6.9	0.0	0.0	chr10	131726413	131726443	(2070979)	+	(CTCC)n	Simple_repeat	1	31	(0)	570865
1379	16.6	1.7	0.4	chr10	131900258	131900492	(1896930)	+	AluJb	SINE/Alu	39	276	(36)	571059
315	32.2	9.5	1.5	chr11	208146	208419	(134878203)	+	L2b	LINE/L2	3021	3315	(60)	573081
17	26.0	1.8	0.0	chr11	417387	417441	(134669181)	+	(GCAGCG)n	Simple_repeat	1	56	(0)	573358
460	15.2	0.0	0.0	chr11	616099	616177	(134470445)	+	Alu	SINE/Alu	218	296	(16)	573633
32	17.7	6.4	4.5	chr11	695191	695315	(134391307)	+	(AGCCG)n	Simple_repeat	1	133	(0)	573781
18	6.2	2.5	7.3	chr11	747424	747463	(134339159)	+	(GCC)n	Simple_repeat	1	41	(0)	573885
15	9.9	0.0	7.9	chr11	830651	830688	(134255934)	+	(CTGGAG)n	Simple_repeat	1	38	(0)	573998
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
19	11.2	5.8	3.6	chr11	2885520	2885571	(132201051)	+	GA-rich	Low_complexity	1	55	(0)	576274
20	13.7	6.2	0.0	chr11	2885896	2885943	(132200679)	+	(CCGCC)n	Simple_repeat	1	51	(0)	576275
27	22.4	1.9	5.7	chr11	2885965	2886068	(132200554)	+	G-rich	Low_complexity	1	106	(0)	576276
258	29.6	6.5	1.2	chr11	2888398	2888558	(132198064)	+	MLT1J2	LTR/ERVL-MaLR	34	203	(245)	576280
183	28.3	5.4	1.9	chr11	2888743	2888796	(132197826)	C	MIRb	SINE/MIR	(100)	168	113	576281
183	24.1	4.9	0.0	chr11	2892310	2892367	(132194255)	+	MIRc	SINE/MIR	89	149	(119)	576288
35	17.9	3.9	3.8	chr11	2892561	2892662	(132193960)	+	(CCT)n	Simple_repeat	1	106	(0)	576289
16	21.4	0.0	2.4	chr11	3797483	3797523	(131289099)	+	(CCG)n	Simple_repeat	1	41	(0)	577720
16	8.7	0.0	0.0	chr11	6481521	6481545	(128605077)	+	(AGC)n	Simple_repeat	1	25	(0)	581392
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
15	18.1	0.0	0.0	chr11	13009382	13009414	(122077208)	+	(CGCAGC)n	Simple_repeat	1	33	(0)	591659
12	17.4	0.0	5.6	chr11	14381423	14381458	(120705164)	+	(GCCC)n	Simple_repeat	1	36	(0)	593805
24	14.7	0.0	0.0	chr11	14499566	14499610	(120587012)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	594061
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
14	21.5	2.2	2.2	chr11	17353526	17353570	(117733052)	+	G-rich	Low_complexity	1	46	(0)	598618
13	0.0	0.0	0.0	chr11	17353714	17353730	(117732892)	+	(GCA)n	Simple_repeat	1	17	(0)	598619
15	27.9	1.6	3.1	chr11	18791533	18791596	(116295026)	+	(GCGG)n	Simple_repeat	1	65	(0)	601236
19	37.4	0.0	1.8	chr11	18791579	18791687	(116294935)	+	(TGCGTG)n	Simple_repeat	1	109	(0)	601237
13	20.6	2.4	2.4	chr11	20363824	20363864	(114722758)	+	(GCG)n	Simple_repeat	1	42	(0)	603807
12	9.7	0.0	0.0	chr11	35617736	35617757	(99468865)	+	(TGAA)n	Simple_repeat	1	22	(0)	627048
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
12	16.3	2.8	2.7	chr11	45147136	45147171	(89939451)	+	(CTCCTCG)n	Simple_repeat	1	37	(0)	641574
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
930	17.9	9.7	5.8	chr11	46247510	46247717	(88838905)	C	MER20	DNA/hAT-Charlie	(0)	219	3	643592
435	34.6	10.9	5.8	chr11	46247860	46248172	(88838450)	C	L2b	LINE/L2	(25)	3350	3020	643593
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
12	26.5	2.9	4.3	chr11	60914554	60914621	(74172001)	+	(CCAGCC)n	Simple_repeat	1	70	(0)	659099
14	21.1	0.0	2.5	chr11	61509724	61509763	(73576859)	+	(GCCCCG)n	Simple_repeat	1	40	(0)	660336
301	27.6	7.2	3.7	chr11	61793081	61793242	(73293380)	+	MIRb	SINE/MIR	15	182	(86)	660848
19	18.5	5.5	0.0	chr11	61955654	61955708	(73130914)	+	(CTGGCCC)n	Simple_repeat	1	58	(0)	661170
11	34.9	1.4	1.4	chr11	62601572	62601641	(72484981)	+	(CCGCCG)n	Simple_repeat	1	71	(0)	662388
1531	26.2	5.7	2.5	chr11	62621150	62621731	(72464891)	C	L2a	LINE/L2	(0)	3426	2828	662417
13	18.8	0.0	5.0	chr11	62621822	62621861	(72464761)	+	(CGCCC)n	Simple_repeat	1	40	(0)	662418
2009	7.5	5.1	0.7	chr11	62791264	62791542	(72295080)	C	AluSc8	SINE/Alu	(19)	292	1	662814
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
12	29.7	3.2	1.5	chr11	64713287	64713349	(70373273)	+	(CGCGCGT)n	Simple_repeat	1	65	(0)	666089
21	28.5	0.0	5.3	chr11	65314750	65314843	(69771779)	+	G-rich	Low_complexity	1	94	(0)	667293
67	24.2	1.5	5.7	chr11	65524835	65525093	(69561529)	+	(CCGCC)n	Simple_repeat	1	263	(0)	667714
17	27.2	0.0	5.5	chr11	65539064	65539136	(69547486)	+	(GGC)n	Simple_repeat	1	73	(0)	667738
26	0.0	0.0	0.0	chr11	65833561	65833585	(69253037)	+	(CTTCCC)n	Simple_repeat	1	25	(0)	668265
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
22	24.2	1.9	6.5	chr11	65919124	65919228	(69167394)	+	G-rich	Low_complexity	1	107	(0)	668433
13	31.5	0.0	3.2	chr11	65961813	65961874	(69124748)	+	(GGC)n	Simple_repeat	1	62	(0)	668549
12	29.2	4.7	3.4	chr11	65961917	65962001	(69124621)	+	(GCGGAA)n	Simple_repeat	1	89	(0)	668550
309	31.8	12.5	0.0	chr11	66328573	66328698	(68757924)	C	L2a	LINE/L2	(2)	3424	3281	669254
13	16.2	0.0	5.3	chr11	66371654	66371691	(68714931)	+	G-rich	Low_complexity	1	38	(0)	669343
11	28.4	0.0	0.0	chr11	66479958	66479996	(68606626)	+	(CAAGTCC)n	Simple_repeat	1	39	(0)	669605
245	25.9	13.6	6.9	chr11	66729234	66729349	(68357273)	C	MIRb	SINE/MIR	(27)	241	117	670107
211	21.9	6.8	17.2	chr11	66729625	66729740	(68356882)	+	MIR3	SINE/MIR	100	202	(6)	670108
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
480	25.9	6.7	5.1	chr11	68004250	68004424	(67082198)	+	MIR	SINE/MIR	49	226	(36)	672600
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
278	31.0	7.9	1.5	chr11	68272433	68272563	(66814059)	C	MIRb	SINE/MIR	(8)	260	121	673103
2444	7.5	0.3	0.7	chr11	68272665	68272971	(66813651)	+	AluSx3	SINE/Alu	1	306	(5)	673104
213	32.9	7.6	2.5	chr11	70269946	70270107	(64816515)	C	MIRb	SINE/MIR	(29)	239	69	676598
266	31.9	4.2	0.9	chr11	70641479	70641592	(64445030)	+	MLT1J1	LTR/ERVL-MaLR	40	157	(287)	677141
249	28.9	13.5	0.0	chr11	72113181	72113270	(62973352)	C	L2b	LINE/L2	(33)	3342	3239	679367
16	11.6	2.4	4.8	chr11	73982881	73982921	(61103701)	+	G-rich	Low_complexity	1	42	(0)	683165
671	29.2	7.3	3.6	chr11	75233384	75233714	(59852908)	+	MLT1J	LTR/ERVL-MaLR	167	510	(2)	685602
21	15.5	0.0	0.0	chr11	76782958	76782993	(58303629)	+	(CA)n	Simple_repeat	1	36	(0)	688673
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
12	17.6	4.0	5.8	chr11	77040151	77040200	(58046422)	+	(GCACGCT)n	Simple_repeat	1	52	(0)	689144
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
12	16.2	7.0	2.2	chr11	82901319	82901361	(52185261)	+	(CCTC)n	Simple_repeat	1	46	(0)	699673
119	4.3	2.8	0.0	chr11	84714527	84714670	(50371952)	+	(CTCTTT)n	Simple_repeat	1	148	(0)	702814
369	25.9	2.8	0.6	chr11	85810838	85810962	(49275660)	C	MIR3	SINE/MIR	(49)	159	42	704417
218	28.4	3.9	0.0	chr11	85854743	85854816	(49231806)	C	MIR3	SINE/MIR	(47)	161	85	704507
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
20	7.9	0.0	0.0	chr11	88337931	88337957	(46748665)	+	(T)n	Simple_repeat	1	27	(0)	708395
46	0.0	0.0	0.0	chr11	89491728	89491766	(45594856)	+	(AC)n	Simple_repeat	1	39	(0)	710123
16	17.0	0.0	0.0	chr11	93197794	93197826	(41888796)	+	(CGC)n	Simple_repeat	1	33	(0)	715244
2087	8.2	0.0	12.9	chr11	93661104	93661445	(41425177)	C	AluJb	SINE/Alu	(14)	298	1	715957
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
45941	10.3	2.1	2.0	chr11	94650510	94657040	(40429582)	+	HERV4_I-int	LTR/ERV1	1	6539	(0)	717469
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
2180	9.9	0.0	0.0	chr11	95158643	95158925	(39927697)	+	AluSx1	SINE/Alu	2	284	(28)	718218
349	26.7	8.4	0.8	chr11	95158926	95158995	(39927627)	C	MIRb	SINE/MIR	(165)	103	29	718217
20	13.7	1.9	5.5	chr11	107928336	107928409	(27158213)	+	(CCCCCG)n	Simple_repeat	1	71	(0)	735863
12	22.7	0.0	2.6	chr11	111602442	111602479	(23484143)	+	G-rich	Low_complexity	1	38	(0)	741647
14	23.3	0.0	2.4	chr11	111602500	111602541	(23484081)	+	(CCGC)n	Simple_repeat	1	42	(0)	741648
1735	24.9	14.0	0.2	chr11	112308990	112309468	(22777154)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	1	742931
1787	11.4	1.4	4.1	chr11	113990607	113990896	(21095726)	+	AluSz	SINE/Alu	26	307	(5)	745539
329	26.0	6.8	1.6	chr11	113990946	113991070	(21095552)	+	L1ME3C	LINE/L1	5990	6121	(2)	745540
17	23.7	0.0	3.7	chr11	115504293	115504358	(19582264)	+	(CAGCCG)n	Simple_repeat	1	63	(0)	747726
456	26.7	4.1	1.3	chr11	116357668	116357816	(18728806)	C	MIRb	SINE/MIR	(39)	229	63	749145
18	29.9	0.0	0.0	chr11	117986112	117986158	(17100464)	+	(CA)n	Simple_repeat	1	47	(0)	752104
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
16	21.8	3.6	1.8	chr11	118790981	118791035	(16295587)	+	(CCCGCC)n	Simple_repeat	1	57	(0)	753566
17	19.5	5.1	6.0	chr11	118791133	118791211	(16295411)	+	(TCGC)n	Simple_repeat	1	83	(0)	753567
291	17.6	11.9	0.0	chr11	118792759	118792832	(16293790)	+	MER89	LTR/ERV1	1	84	(475)	753568
1669	16.8	6.3	2.6	chr11	118792811	118793159	(16293463)	+	MER89	LTR/ERV1	197	559	(0)	753568
28	0.0	0.0	0.0	chr11	119018676	119018701	(16067921)	+	(GGA)n	Simple_repeat	1	26	(0)	754099
25	15.6	0.0	1.9	chr11	119334698	119334749	(15751873)	+	(CGACC)n	Simple_repeat	1	52	(0)	754708
11	17.3	7.7	0.0	chr11	121024161	121024199	(14062423)	+	G-rich	Low_complexity	1	42	(0)	757568
30	26.3	3.4	2.4	chr11	121452144	121452171	(13634451)	+	(CGGCG)n	Simple_repeat	1	49	(74)	758140
19	17.6	5.9	0.0	chr11	121452172	121452222	(13634400)	+	(GGC)n	Simple_repeat	1	54	(0)	758141
30	26.3	3.4	2.4	chr11	121452223	121452262	(13634360)	+	(CGGCG)n	Simple_repeat	50	123	(0)	758140
24	22.5	5.0	4.8	chr11	123195648	123195769	(11890853)	+	(TTCCCTC)n	Simple_repeat	1	122	(0)	761048
25	26.6	2.0	3.0	chr11	123741912	123742010	(11344612)	+	(TTTTCT)n	Simple_repeat	1	101	(0)	762085
186	27.4	3.1	0.0	chr11	125941889	125941950	(9144672)	+	L3	LINE/CR1	3262	3325	(774)	765271
259	32.5	3.4	2.6	chr11	128776677	128776809	(6309813)	C	MIR1_Amn	SINE/MIR	(103)	165	32	769373
296	27.0	6.7	0.8	chr11	129895861	129895987	(5190635)	C	MIRb	SINE/MIR	(8)	260	126	770957
439	28.9	1.6	3.6	chr11	131247032	131247225	(3839397)	+	UCON40	Unknown	1	190	(125)	773035
316	30.3	0.9	4.4	chr11	133968641	133968754	(1117868)	+	MIRb	SINE/MIR	141	250	(18)	776579
1921	15.7	21.1	1.1	chr11	135075695	135076563	(10059)	+	TAR1	Satellite/telo	1	1042	(938)	778016
2462	6.0	0.0	0.3	chr12	950290	950587	(132324722)	+	AluYm1	SINE/Alu	1	297	(14)	779754
34	22.3	1.8	4.3	chr12	2959209	2959321	(130315988)	+	(CCCCG)n	Simple_repeat	1	115	(0)	783020
12	4.7	0.0	7.7	chr12	2959345	2959370	(130315939)	+	(CTCC)n	Simple_repeat	1	26	(0)	783021
20	21.7	4.3	5.1	chr12	2959652	2959745	(130315564)	+	(TCGCTCC)n	Simple_repeat	1	98	(0)	783022
17	3.4	6.7	0.0	chr12	2959797	2959826	(130315483)	+	(CTCCG)n	Simple_repeat	1	32	(0)	783023
200	31.5	5.3	3.3	chr12	4135218	4135309	(129140000)	+	Tigger19a	DNA/TcMar-Tigger	228	308	(15)	785000
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
14	13.2	4.3	6.1	chr12	6689168	6689214	(126586095)	+	GA-rich	Low_complexity	1	49	(0)	789181
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
2191	13.2	10.4	0.0	chr12	8796829	8797200	(124478109)	C	MSTA	LTR/ERVL-MaLR	(13)	415	1	792906
455	25.7	4.0	3.4	chr12	8797217	8797365	(124477944)	C	ERV3-16A3_I-int	LTR/ERVL	(2725)	2501	2352	792905
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
508	23.8	0.8	0.8	chr12	12350540	12350666	(120924643)	C	L1ME4b	LINE/L1	(22)	870	744	798004
13	10.8	3.1	3.0	chr12	12357357	12357388	(120917921)	+	(TCCCTG)n	Simple_repeat	1	33	(0)	798018
39	0.0	0.0	0.0	chr12	12696340	12696375	(120578934)	+	(T)n	Simple_repeat	1	36	(0)	798590
13	8.1	3.9	0.0	chr12	12717774	12717799	(120557510)	+	(TTTGT)n	Simple_repeat	1	27	(0)	798630
14	20.5	2.6	0.0	chr12	22625288	22625326	(110649983)	+	(CCGC)n	Simple_repeat	1	40	(0)	812441
19	26.9	0.0	3.0	chr12	22625357	22625422	(110649887)	+	(GTC)n	Simple_repeat	1	66	(0)	812442
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
20	8.0	0.0	0.0	chr12	26124959	26124985	(107150324)	+	(CA)n	Simple_repeat	1	27	(0)	817539
12	33.5	0.0	0.0	chr12	26125102	26125153	(107150156)	+	G-rich	Low_complexity	1	52	(0)	817540
198	28.4	0.0	0.2	chr12	28190018	28190080	(105085229)	C	L2b	LINE/L2	(3)	3423	3320	820739
773	30.5	3.6	0.3	chr12	29901440	29901738	(103373571)	C	LTR78	LTR/ERV1	(0)	1304	996	823003
7235	20.4	6.4	4.8	chr12	30844414	30844745	(102430564)	+	HUERS-P3-int	LTR/ERV1	411	805	(6613)	824277
2498	7.7	0.3	0.0	chr12	30844746	30845056	(102430253)	+	AluSp	SINE/Alu	1	312	(1)	824278
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
15	19.9	2.0	3.9	chr12	32107220	32107269	(101168040)	+	(CTTTCC)n	Simple_repeat	1	51	(0)	826844
18	7.6	0.0	0.0	chr12	33440021	33440048	(99835261)	+	(GAGG)n	Simple_repeat	1	28	(0)	829057
16	9.2	7.7	5.4	chr12	40105598	40105651	(93169658)	+	(CGCCG)n	Simple_repeat	1	55	(0)	833296
13	5.2	0.0	0.0	chr12	42144751	42144770	(91130539)	+	(CCG)n	Simple_repeat	1	20	(0)	836072
561	27.6	6.0	0.3	chr12	42145087	42145286	(91130023)	+	MIRb	SINE/MIR	6	221	(47)	836073
2290	10.2	0.0	1.9	chr12	44949039	44949351	(88325958)	+	AluSc	SINE/Alu	1	307	(2)	840111
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
12	15.3	3.5	0.0	chr12	48957329	48957357	(84317952)	+	(CGC)n	Simple_repeat	1	30	(0)	846157
16	13.2	0.0	0.0	chr12	48998772	48998805	(84276504)	+	(GT)n	Simple_repeat	1	34	(0)	846236
90	2.3	0.0	0.0	chr12	49264788	49264876	(84010433)	+	(CCCTTCCTC)n	Simple_repeat	1	89	(0)	846829
12	27.7	0.0	0.0	chr12	49336438	49336476	(83938833)	+	(GCA)n	Simple_repeat	1	39	(0)	846987
408	28.0	3.9	3.2	chr12	49843240	49843394	(83431915)	C	MIRb	SINE/MIR	(27)	241	86	847909
352	31.7	4.7	1.9	chr12	49843439	49843541	(83431768)	C	MIR3	SINE/MIR	(33)	175	70	847910
16	4.5	4.3	0.0	chr12	52741653	52741675	(80533634)	+	(AC)n	Simple_repeat	1	24	(0)	853356
634	25.3	3.0	2.4	chr12	52741710	52741875	(80533434)	+	MIR	SINE/MIR	3	169	(93)	853357
2109	9.8	0.3	2.4	chr12	53005753	53006047	(80269262)	+	AluSq2	SINE/Alu	1	289	(24)	853908
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
15	0.0	0.0	4.3	chr12	56266850	56266872	(77008437)	+	(CCTT)n	Simple_repeat	1	23	(0)	859192
391	29.1	12.8	4.5	chr12	56468164	56468352	(76806957)	C	MIRb	SINE/MIR	(58)	204	1	859601
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
41	13.8	8.7	0.0	chr12	57941429	57941532	(75333777)	+	(GCCCCTC)n	Simple_repeat	1	113	(0)	862097
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
16	13.6	2.2	6.4	chr12	65121355	65121400	(68153909)	+	GA-rich	Low_complexity	1	47	(0)	872296
12	24.0	4.8	3.1	chr12	65170235	65170296	(68105013)	+	G-rich	Low_complexity	1	65	(0)	872394
11	21.5	4.4	2.1	chr12	65278562	65278606	(67996703)	+	(GGCGGCC)n	Simple_repeat	1	47	(0)	872574
29	3.2	0.0	0.0	chr12	65278805	65278836	(67996473)	+	(CTCTGC)n	Simple_repeat	1	32	(0)	872575
19	21.1	2.0	0.0	chr12	65278877	65278925	(67996384)	+	(CTCCC)n	Simple_repeat	1	50	(0)	872576
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
30	20.2	2.3	3.4	chr12	67648632	67648717	(65626592)	+	(GGC)n	Simple_repeat	1	88	(0)	876221
18	32.7	1.5	0.0	chr12	67648690	67648757	(65626552)	+	(GC)n	Simple_repeat	1	69	(0)	876222
12	11.5	3.3	3.2	chr12	67648900	67648929	(65626380)	+	GA-rich	Low_complexity	1	31	(0)	876223
2076	25.9	10.8	4.2	chr12	69358807	69359638	(63915671)	C	HAL1	LINE/L1	(358)	2149	1234	879124
14	23.2	1.9	3.6	chr12	69359672	69359725	(63915584)	+	(GCGCGT)n	Simple_repeat	1	55	(0)	879126
22	33.4	0.0	0.0	chr12	84912766	84912840	(48362469)	+	(GT)n	Simple_repeat	1	75	(0)	900920
229	36.9	5.4	1.7	chr12	94101215	94101393	(39173916)	+	Tigger19a	DNA/TcMar-Tigger	27	212	(111)	914667
328	31.2	2.1	2.9	chr12	94879912	94880025	(38395284)	C	MIR	SINE/MIR	(132)	136	24	915999
12	11.6	3.3	3.2	chr12	100826351	100826380	(32448929)	+	(TGATG)n	Simple_repeat	1	31	(0)	926237
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
7050	8.4	14.1	10.3	chr12	107864194	107865394	(25409915)	+	LTR12D	LTR/ERV1	1	1254	(0)	938983
477	31.3	5.4	4.9	chr12	109572739	109573107	(23702202)	+	MamRep4096	DNA/hAT-Tip100	1	371	(55)	942773
224	18.2	0.0	10.2	chr12	109736645	109736693	(23538616)	+	L2b	LINE/L2	3309	3352	(23)	943197
211	16.2	0.0	0.0	chr12	109900017	109900053	(23375256)	C	MER5B	DNA/hAT-Charlie	(141)	37	1	943607
16	16.0	2.2	4.3	chr12	110281725	110281770	(22993539)	+	(GAGGC)n	Simple_repeat	1	47	(0)	944415
267	20.0	5.0	0.0	chr12	111686339	111686414	(21588895)	C	MIR1_Amn	SINE/MIR	(80)	150	62	947658
2219	9.4	1.3	0.3	chr12	111686437	111686733	(21588576)	+	AluSq	SINE/Alu	1	300	(13)	947659
13	28.3	1.6	3.1	chr12	111766730	111766792	(21508517)	+	G-rich	Low_complexity	1	64	(0)	947852
13	19.0	0.0	5.0	chr12	111766958	111766997	(21508312)	+	(GCCCGCT)n	Simple_repeat	1	40	(0)	947853
18	23.0	1.5	4.5	chr12	111842515	111842580	(21432729)	+	(GCC)n	Simple_repeat	1	67	(0)	948011
17	13.5	0.0	8.3	chr12	112108584	112108631	(21166678)	+	(GCCC)n	Simple_repeat	1	48	(0)	948493
373	23.0	2.9	9.9	chr12	112418544	112418648	(20856661)	C	MIR	SINE/MIR	(110)	152	56	949169
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
217	33.4	11.3	0.8	chr12	113065218	113065362	(20209947)	C	MIR1_Amn	SINE/MIR	(24)	206	49	950707
18	12.1	2.6	2.6	chr12	113077644	113077681	(20197628)	+	(CCG)n	Simple_repeat	1	39	(0)	950738
15	11.1	7.3	2.3	chr12	113154486	113154526	(20120783)	+	(GAGCGC)n	Simple_repeat	1	44	(0)	950923
2264	10.3	0.0	0.0	chr12	113154889	113155188	(20120121)	+	AluSx1	SINE/Alu	2	301	(11)	950924
13	23.3	0.0	2.4	chr12	113221664	113221705	(20053604)	+	G-rich	Low_complexity	1	42	(0)	951099
669	28.4	15.1	3.1	chr12	113747532	113748057	(19527252)	+	L2a	LINE/L2	2813	3424	(2)	952398
495	23.9	12.4	4.7	chr12	116910536	116910750	(16364559)	+	L2a	LINE/L2	3192	3425	(1)	959264
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
19	21.7	1.8	1.8	chr12	117969235	117969289	(15306020)	+	(GCGA)n	Simple_repeat	1	56	(0)	961515
30	19.5	2.8	1.4	chr12	117969563	117969652	(15305657)	+	(GT)n	Simple_repeat	1	91	(0)	961516
16	13.2	0.0	0.0	chr12	118645303	118645327	(14629982)	+	(T)n	Simple_repeat	1	25	(0)	963047
35	5.0	0.0	0.0	chr12	119156612	119156652	(14118657)	+	(CCGGAG)n	Simple_repeat	1	41	(0)	964111
48	5.5	0.0	0.0	chr12	119156703	119156759	(14118550)	+	(AGCCGG)n	Simple_repeat	1	57	(0)	964112
14	19.2	4.8	0.0	chr12	119667740	119667781	(13607528)	+	(GCCTGG)n	Simple_repeat	1	44	(0)	965295
17	20.4	2.1	2.1	chr12	119989948	119989994	(13285315)	+	(CCG)n	Simple_repeat	1	48	(0)	966005
12	25.7	0.0	0.0	chr12	119990018	119990054	(13285255)	+	(GGAGCT)n	Simple_repeat	1	37	(0)	966006
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
226	24.5	0.0	0.0	chr12	120495928	120495980	(12779329)	+	LTR71B	LTR/ERV1	309	361	(249)	967223
237	32.8	4.9	0.8	chr12	121798105	121798221	(11477088)	+	MIRb	SINE/MIR	5	126	(142)	970347
20	25.1	2.3	4.5	chr12	122078969	122079055	(11196254)	+	(CCGCG)n	Simple_repeat	1	89	(0)	971061
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
7938	5.2	4.3	0.2	chr12	132810348	132811313	(463996)	+	LTR13	LTR/ERVK	1	1007	(0)	989974
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
19	11.0	2.4	2.4	chr13	19863432	19863472	(94500856)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	993246
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
844	23.2	11.4	6.0	chr13	28297390	28297885	(86066443)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	9	1006515
370	23.4	10.3	9.1	chr13	30674562	30674782	(83689546)	C	MER106A	DNA/hAT-Charlie	(11)	225	2	1010175
16	20.9	0.0	7.8	chr13	31161596	31161659	(83202669)	+	(TCCGCC)n	Simple_repeat	1	64	(0)	1010957
2440	9.1	0.0	0.3	chr13	36761708	36762014	(77602314)	C	AluSz	SINE/Alu	(6)	306	1	1019010
5196	11.6	1.8	3.0	chr13	36762015	36762156	(77602172)	C	MER4D1	LTR/ERV1	(703)	197	55	1019009
3190	14.9	6.9	2.1	chr13	36762157	36762738	(77601590)	C	LTR9	LTR/ERV1	(0)	612	1	1019011
325	13.0	0.0	0.0	chr13	36999875	36999928	(77364400)	+	MER53	DNA/hAT	138	191	(2)	1019395
2721	3.7	0.0	0.0	chr13	37000064	37000363	(77363965)	+	AluY	SINE/Alu	1	300	(11)	1019396
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
14	17.6	2.5	2.4	chr13	41457396	41457435	(72906893)	+	G-rich	Low_complexity	1	41	(0)	1025878
18	10.0	4.1	5.9	chr13	41457466	41457515	(72906813)	+	(GCCCCG)n	Simple_repeat	1	49	(0)	1025879
24	23.4	3.9	1.2	chr13	42272049	42272132	(72092196)	+	(GCG)n	Simple_repeat	1	86	(0)	1027115
12	12.0	7.9	2.4	chr13	44988911	44988948	(69375380)	+	(CAGAGTG)n	Simple_repeat	1	41	(0)	1031322
21	3.5	0.0	0.0	chr13	48038268	48038294	(66326034)	+	(TGAT)n	Simple_repeat	1	27	(0)	1036157
22	14.9	2.2	0.0	chr13	49792569	49792613	(64571715)	+	G-rich	Low_complexity	1	46	(0)	1039049
13	27.4	0.0	6.2	chr13	49792664	49792727	(64571601)	+	G-rich	Low_complexity	1	64	(0)	1039049
13	19.7	0.0	6.5	chr13	49936438	49936483	(64427845)	+	G-rich	Low_complexity	1	46	(0)	1039354
229	22.1	0.8	3.2	chr13	52159787	52159872	(62204456)	+	MIRc	SINE/MIR	16	102	(166)	1042687
621	25.0	11.8	6.3	chr13	52159874	52160176	(62204152)	+	MLT1D	LTR/ERVL-MaLR	1	322	(183)	1042688
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
41	2.4	0.0	0.0	chr13	53201091	53201132	(61163196)	+	(CGC)n	Simple_repeat	1	42	(0)	1044310
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
14	16.9	0.0	2.9	chr13	77697539	77697573	(36666755)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	1076566
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
13	13.1	0.0	0.0	chr13	87677539	87677563	(26686765)	+	(CGG)n	Simple_repeat	1	25	(0)	1089329
37	23.5	0.0	1.1	chr13	87677746	87677837	(26686491)	+	(CAG)n	Simple_repeat	1	92	(0)	1089330
21	20.3	4.5	7.0	chr13	95552630	95552657	(18811671)	+	(GGCGGA)n	Simple_repeat	1	68	(47)	1100329
14	14.9	9.2	4.2	chr13	95552658	95552722	(18811606)	+	(GGAGTGCG)n	Simple_repeat	1	71	(0)	1100330
21	20.3	4.5	7.0	chr13	95552723	95552739	(18811589)	+	(GGCGGA)n	Simple_repeat	69	115	(0)	1100329
878	21.9	0.5	3.5	chr13	99796439	99796637	(14567691)	C	MIR	SINE/MIR	(10)	252	60	1106852
17	28.7	0.0	0.0	chr13	99956289	99956332	(14407996)	+	(CA)n	Simple_repeat	1	44	(0)	1107112
12	23.4	4.6	4.4	chr13	100089149	100089213	(14275115)	+	(CGCTGG)n	Simple_repeat	1	68	(0)	1107378
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
1297	22.1	2.6	0.0	chr13	110797183	110797480	(3566848)	C	L1M5	LINE/L1	(400)	5773	5468	1121768
13	17.6	0.0	2.9	chr13	110914896	110914929	(3449399)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1121925
17	14.6	0.0	4.8	chr13	110915076	110915117	(3449211)	+	G-rich	Low_complexity	1	42	(0)	1121926
567	26.5	18.0	3.5	chr13	112735466	112735837	(1628491)	C	Charlie15b	DNA/hAT-Charlie	(82)	979	542	1123883
537	30.5	5.0	2.8	chr13	112736133	112736385	(1627943)	+	MIRb	SINE/MIR	6	264	(4)	1123884
2609	22.9	6.6	8.2	chr13	113211685	113212501	(1151827)	C	L1ME1	LINE/L1	(452)	5727	4960	1124332
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
12	15.8	2.6	5.0	chr13	113394174	113394212	(970116)	+	(GGCGG)n	Simple_repeat	1	40	(0)	1124636
2376	8.6	0.0	1.0	chr13	113394636	113394937	(969391)	C	AluSq2	SINE/Alu	(14)	299	1	1124637
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
14	4.9	0.0	0.0	chr14	20684770	20684790	(86358928)	+	(CTC)n	Simple_repeat	1	21	(0)	1128461
20	21.2	3.5	5.7	chr14	21070606	21070690	(85973028)	+	(TCC)n	Simple_repeat	1	88	(0)	1129044
12	8.1	3.6	3.5	chr14	21070690	21070717	(85973001)	+	(CTGTC)n	Simple_repeat	1	29	(0)	1129045
25	22.4	2.5	2.4	chr14	21092542	21092622	(85951096)	+	(GGCTGA)n	Simple_repeat	1	83	(0)	1129071
23	17.2	1.9	0.0	chr14	21092584	21092635	(85951083)	+	(GGCGGA)n	Simple_repeat	1	53	(0)	1129072
32	0.0	0.0	0.0	chr14	22883256	22883285	(84160433)	+	(GCACAC)n	Simple_repeat	1	30	(0)	1131891
17	20.5	0.0	0.0	chr14	22883292	22883331	(84160387)	+	(ACACGG)n	Simple_repeat	1	40	(0)	1131892
13	19.4	0.0	2.7	chr14	22982543	22982579	(84061139)	+	(CGCCCCC)n	Simple_repeat	1	37	(0)	1132084
2263	12.1	0.0	0.7	chr14	23527902	23528208	(83515510)	C	AluSx	SINE/Alu	(7)	305	1	1132995
14	18.4	2.1	4.2	chr14	24141475	24141521	(82902197)	+	(GCCCCCG)n	Simple_repeat	1	48	(0)	1133811
13	17.4	0.0	2.9	chr14	24188317	24188350	(82855368)	+	(CCCCA)n	Simple_repeat	1	34	(0)	1133873
185	34.8	1.7	4.2	chr14	24242824	24242943	(82800775)	+	MIRc	SINE/MIR	56	172	(96)	1133958
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
26	0.0	0.0	0.0	chr14	35808843	35808867	(71234851)	+	(CTGCCA)n	Simple_repeat	1	25	(0)	1150653
13	8.5	0.0	3.7	chr14	35826847	35826873	(71216845)	+	(CGGGG)n	Simple_repeat	1	27	(0)	1150696
2306	5.4	0.0	1.1	chr14	49635354	49635631	(57408087)	+	AluYm1	SINE/Alu	1	275	(36)	1168310
13	29.7	1.5	3.0	chr14	49688218	49688282	(57355436)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1168416
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
17	4.3	0.0	0.0	chr14	50312360	50312383	(56731335)	+	(CTCC)n	Simple_repeat	1	24	(0)	1169748
22	14.7	2.2	0.0	chr14	50312611	50312655	(56731063)	+	(CGCCCC)n	Simple_repeat	1	46	(0)	1169749
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
12	16.9	2.9	2.8	chr14	53153332	53153366	(53890352)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1174114
39	22.3	3.6	4.2	chr14	53956783	53956921	(53086797)	+	(CTCC)n	Simple_repeat	1	144	(0)	1175257
524	31.2	8.2	2.9	chr14	59577028	59577234	(47466484)	C	MIRb	SINE/MIR	(1)	267	50	1183903
15	24.5	5.8	1.4	chr14	60515657	60515725	(46527993)	+	(GGCCTG)n	Simple_repeat	1	73	(0)	1185116
13	9.8	9.1	0.0	chr14	61280990	61281022	(45762696)	+	(AGGCCC)n	Simple_repeat	1	36	(0)	1186281
12	19.3	0.0	10.3	chr14	61695436	61695493	(45348225)	+	(CCCTCC)n	Simple_repeat	1	58	(0)	1186912
33	3.1	0.0	0.0	chr14	70641588	70641620	(36402098)	+	(CA)n	Simple_repeat	1	33	(0)	1201466
12	13.5	0.0	7.9	chr14	70641622	70641659	(36402059)	+	(CCCCTA)n	Simple_repeat	1	38	(0)	1201467
23	21.1	1.3	5.1	chr14	70907480	70907557	(36136161)	+	(GGCGGC)n	Simple_repeat	1	79	(0)	1201960
2377	9.9	0.0	0.0	chr14	73592573	73592875	(33450843)	+	AluSz	SINE/Alu	3	305	(7)	1206635
302	21.2	7.2	10.3	chr14	73852201	73852262	(33191456)	C	L2a	LINE/L2	(5)	3421	3362	1207230
2198	8.0	3.4	1.4	chr14	73852263	73852550	(33191168)	C	AluSc8	SINE/Alu	(17)	294	1	1207231
12	18.9	7.1	0.0	chr14	74612113	74612154	(32431564)	+	(GCTCCGA)n	Simple_repeat	1	45	(0)	1208835
13	19.4	4.8	8.1	chr14	74882086	74882168	(32161550)	+	(GGCCG)n	Simple_repeat	1	87	(0)	1209340
13	23.9	0.0	0.0	chr14	77026836	77026870	(30016848)	+	(CGA)n	Simple_repeat	1	35	(0)	1213463
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
303	28.1	1.2	0.0	chr14	77208698	77208779	(29834939)	+	MIR	SINE/MIR	180	262	(0)	1213826
20	14.6	0.0	0.0	chr14	77980957	77980994	(29062724)	+	(TGCGTG)n	Simple_repeat	1	38	(0)	1215412
232	30.1	7.6	2.7	chr14	82075653	82075727	(24967991)	C	MER91A	DNA/hAT-Tip100	(0)	196	118	1221608
17	8.6	5.1	2.4	chr14	88563467	88563505	(18480213)	+	G-rich	Low_complexity	1	41	(0)	1230630
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
12	18.6	5.4	0.0	chr14	90383659	90383695	(16660023)	+	(TCGCCCT)n	Simple_repeat	1	39	(0)	1233810
378	34.4	12.8	4.5	chr14	90495027	90495361	(16548357)	C	L2c	LINE/L2	(0)	3387	3021	1234032
23	8.2	2.4	2.4	chr14	91510015	91510055	(15533663)	+	(CCG)n	Simple_repeat	1	42	(0)	1235828
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
314	29.7	3.8	1.5	chr14	95784111	95784240	(11259478)	+	MIRb	SINE/MIR	87	219	(49)	1243711
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
17	19.8	8.4	1.3	chr14	102776817	102776887	(4266831)	+	(TGCGTG)n	Simple_repeat	1	77	(0)	1255667
2083	5.9	4.1	2.4	chr14	103280091	103280378	(3763340)	C	AluSc	SINE/Alu	(16)	293	1	1256481
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
23	27.9	0.0	2.5	chr14	103715302	103715382	(3328336)	+	(CCCGCC)n	Simple_repeat	1	81	(0)	1257364
12	18.1	2.4	4.8	chr14	103715441	103715481	(3328237)	+	(CTC)n	Simple_repeat	1	42	(0)	1257365
16	15.0	5.3	5.0	chr14	103715758	103715814	(3327904)	+	G-rich	Low_complexity	1	60	(0)	1257366
1127	27.9	9.6	3.5	chr14	104649574	104650142	(2393576)	C	Charlie2b	DNA/hAT-Charlie	(185)	2597	1991	1258647
13	19.9	4.9	0.0	chr14	104650405	104650445	(2393273)	+	(CCACTCC)n	Simple_repeat	1	43	(0)	1258648
19	15.6	4.8	4.5	chr14	104650446	104650463	(2393255)	+	(CCCTCC)n	Simple_repeat	5	66	(0)	1258649
22	16.2	2.0	2.0	chr14	104677815	104677864	(2365854)	+	(CCT)n	Simple_repeat	1	51	(0)	1258705
13	26.6	2.9	4.3	chr14	104753024	104753091	(2290627)	+	(CCGCG)n	Simple_repeat	1	70	(0)	1258777
932	29.5	6.7	5.6	chr14	105414171	105414608	(1629110)	C	MLT1D	LTR/ERVL-MaLR	(49)	456	1	1259654
354	15.6	15.1	4.3	chr15	34038262	34038355	(67952834)	C	L2a	LINE/L2	(0)	3426	3321	1282164
13	0.0	0.0	0.0	chr15	34101790	34101806	(67889383)	+	(AGC)n	Simple_repeat	1	17	(0)	1282290
419	14.3	0.0	0.0	chr15	34437880	34437942	(67553247)	+	L1PA7	LINE/L1	6081	6143	(11)	1282860
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
15	20.6	0.0	6.0	chr15	38564665	38564714	(63426475)	+	(CGC)n	Simple_repeat	1	50	(0)	1288523
19	19.1	5.8	2.7	chr15	40405829	40405897	(61585292)	+	(TGGCGGC)n	Simple_repeat	1	73	(0)	1291144
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
11	23.2	1.6	7.7	chr15	40925943	40926006	(61065183)	+	(CCAGGCC)n	Simple_repeat	1	65	(0)	1292209
17	22.9	4.3	2.7	chr15	41494396	41494465	(60496724)	+	G-rich	Low_complexity	1	73	(0)	1293496
17	17.4	3.0	7.2	chr15	41972413	41972419	(60018770)	+	(GCCC)n	Simple_repeat	1	20	(49)	1294334
14	22.1	4.3	0.0	chr15	41972420	41972466	(60018723)	+	(CGTCCG)n	Simple_repeat	1	49	(0)	1294335
17	17.4	3.0	7.2	chr15	41972467	41972479	(60018710)	+	(GCCC)n	Simple_repeat	21	69	(0)	1294334
13	19.1	0.0	0.0	chr15	42575235	42575264	(59415925)	+	G-rich	Low_complexity	1	30	(0)	1295396
15	30.2	0.0	6.6	chr15	43746221	43746311	(58244878)	+	(CCCCGC)n	Simple_repeat	1	91	(0)	1297539
2338	7.5	1.4	0.3	chr15	43826580	43826872	(58164317)	C	AluSq2	SINE/Alu	(17)	296	1	1297708
14	22.5	0.0	2.3	chr15	43826950	43826992	(58164197)	+	(GCCCC)n	Simple_repeat	1	43	(0)	1297709
22	11.5	0.0	0.0	chr15	48190842	48190879	(53800310)	+	(TTTGC)n	Simple_repeat	1	38	(0)	1304477
20	16.2	1.9	3.8	chr15	49169870	49169876	(52821313)	+	(AACA)n	Simple_repeat	1	49	(0)	1305903
12	23.9	0.0	2.4	chr15	49169877	49169917	(52821272)	+	A-rich	Low_complexity	1	41	(0)	1305904
16	9.8	6.1	5.8	chr15	50182780	50182828	(51808361)	+	(TGTGGC)n	Simple_repeat	1	52	(0)	1307221
14	23.8	2.8	5.5	chr15	52295645	52295715	(49695474)	+	G-rich	Low_complexity	1	73	(0)	1311056
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
241	27.2	4.2	4.2	chr15	62066674	62066769	(39924420)	C	MIRb	SINE/MIR	(50)	218	123	1326288
16	9.9	0.0	5.6	chr15	62390426	62390476	(39600713)	+	(GCCGC)n	Simple_repeat	1	48	(0)	1326828
14	22.0	2.0	3.9	chr15	62390511	62390561	(39600628)	+	(CGCGCT)n	Simple_repeat	1	52	(0)	1326829
17	23.3	0.0	0.0	chr15	62390560	62390604	(39600585)	+	(CGGCGG)n	Simple_repeat	1	45	(0)	1326830
1471	15.3	3.1	11.5	chr15	63088946	63089266	(38901923)	C	AluJo	SINE/Alu	(8)	304	12	1327927
245	33.0	8.0	2.5	chr15	63089288	63089405	(38901784)	+	L3	LINE/CR1	3901	4025	(74)	1327928
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
12	17.2	2.2	6.5	chr15	65792134	65792178	(36199011)	+	(CCCG)n	Simple_repeat	1	46	(0)	1333344
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
188	26.9	3.1	13.1	chr15	66356305	66356411	(35634778)	C	L2c	LINE/L2	(1)	3386	3291	1334509
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
21	26.9	2.0	4.8	chr15	68054173	68054274	(33936915)	+	G-rich	Low_complexity	1	104	(0)	1337661
2130	10.8	0.0	3.7	chr15	71203373	71203669	(30787520)	+	AluSz	SINE/Alu	1	286	(26)	1343351
197	32.4	3.0	7.1	chr15	71203670	71203735	(30787454)	C	L2c	LINE/L2	(630)	2789	2732	1343350
193	33.9	0.0	0.0	chr15	71203761	71203822	(30787367)	C	L2b	LINE/L2	(2)	3373	3312	1343352
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
25	21.0	0.0	1.6	chr15	73633270	73633331	(28357858)	+	G-rich	Low_complexity	1	62	(0)	1347427
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
480	23.6	10.0	3.4	chr15	74760662	74760810	(27230379)	C	LTR88b	LTR/Gypsy?	(649)	188	29	1349463
2128	13.4	0.0	1.3	chr15	74760812	74760981	(27230208)	C	AluSx	SINE/Alu	(9)	303	136	1349464
16	8.2	0.0	0.0	chr15	74995619	74995644	(26995545)	+	(GCAGC)n	Simple_repeat	1	26	(0)	1349979
322	24.8	12.9	0.9	chr15	75196285	75196430	(26794759)	+	MIR1_Amn	SINE/MIR	15	174	(34)	1350385
12	34.4	2.6	1.2	chr15	75843554	75843631	(26147558)	+	(CGGCCC)n	Simple_repeat	1	80	(0)	1351619
11	24.5	2.2	2.2	chr15	76335297	76335341	(25655848)	+	(GGCCTC)n	Simple_repeat	1	46	(0)	1352418
14	21.1	0.0	2.5	chr15	78264886	78264925	(23726264)	+	G-rich	Low_complexity	1	40	(0)	1355545
498	28.8	1.2	6.3	chr15	78340783	78340956	(23650233)	+	MIR3	SINE/MIR	15	179	(29)	1355681
19	20.0	0.9	11.1	chr15	78872783	78872889	(23118300)	+	G-rich	Low_complexity	1	108	(0)	1356790
20	16.4	0.0	0.0	chr15	79090935	79090975	(22900214)	+	(CACACA)n	Simple_repeat	1	41	(0)	1357222
16	15.5	2.8	0.0	chr15	79090975	79091010	(22900179)	+	(CCCTC)n	Simple_repeat	1	37	(0)	1357223
14	17.3	5.1	0.0	chr15	79311269	79311280	(22679909)	+	(GCTCCT)n	Simple_repeat	1	38	(0)	1357652
15	8.9	0.0	0.0	chr15	79311281	79311304	(22679885)	+	(TGC)n	Simple_repeat	1	24	(0)	1357653
16	4.5	0.0	0.0	chr15	80989715	80989737	(21001452)	+	(AGC)n	Simple_repeat	1	23	(0)	1360490
14	5.0	0.0	0.0	chr15	81001815	81001835	(20989354)	+	(AAGG)n	Simple_repeat	1	21	(0)	1360520
285	24.9	6.8	7.3	chr15	82047615	82047816	(19943373)	+	MIR	SINE/MIR	12	220	(42)	1362239
17	17.6	1.7	6.7	chr15	82709459	82709517	(19281672)	+	G-rich	Low_complexity	1	60	(0)	1363302
311	33.6	11.0	6.0	chr15	82985327	82985741	(19005448)	C	L2	LINE/L2	(623)	2796	2359	1363815
255	34.7	1.0	1.0	chr15	84600651	84600749	(17390440)	C	MIR3	SINE/MIR	(25)	183	85	1366243
15	18.3	0.0	2.6	chr15	88895325	88895363	(13095826)	+	(CCCTGC)n	Simple_repeat	1	39	(0)	1373212
1094	25.8	4.2	0.6	chr15	88913659	88914001	(13077188)	+	L1ME4b	LINE/L1	131	486	(406)	1373236
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
523	31.5	7.4	3.5	chr15	89419701	89419960	(12571229)	+	L2	LINE/L2	2686	2956	(463)	1374169
395	22.6	16.5	4.8	chr15	89574824	89575009	(12416180)	C	L1M5	LINE/L1	(311)	5813	5602	1374497
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
456	31.5	5.6	4.5	chr15	90902168	90902294	(11088895)	+	L1ME4c	LINE/L1	410	530	(300)	1377331
281	29.5	4.9	3.1	chr15	99250858	99251018	(2740171)	+	MIR	SINE/MIR	54	217	(45)	1389845
16	14.2	0.0	0.0	chr15	99251078	99251108	(2740081)	+	(GAAT)n	Simple_repeat	1	31	(0)	1389846
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
12	16.3	7.0	2.2	chr15	100973625	100973667	(1017522)	+	G-rich	Low_complexity	1	46	(0)	1392173
68	18.0	0.8	0.0	chr15	101089358	101089484	(901705)	+	(TG)n	Simple_repeat	1	128	(0)	1392301
320	29.8	1.1	0.0	chr15	101137023	101137116	(854073)	+	MIRc	SINE/MIR	81	175	(93)	1392377
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
29	0.0	0.0	0.0	chr16	138719	138745	(90199600)	+	(GGCGCA)n	Simple_repeat	1	27	(0)	1394234
2148	8.1	6.1	1.4	chr16	138924	139219	(90199126)	+	AluSc8	SINE/Alu	1	311	(0)	1394235
348	30.0	10.8	2.8	chr16	383571	383824	(89954521)	+	L1ME4b	LINE/L1	572	848	(44)	1394654
1937	7.0	13.1	0.4	chr16	402163	402434	(89935911)	C	AluSx	SINE/Alu	(0)	312	1	1394695
11	15.2	2.4	7.0	chr16	630884	630925	(89707420)	+	(CCTCTGG)n	Simple_repeat	1	43	(0)	1395033
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
12	18.6	6.7	2.1	chr16	1474877	1474921	(88863424)	+	(CCG)n	Simple_repeat	1	48	(0)	1395967
35	23.7	3.6	3.5	chr16	1763788	1763924	(88574421)	+	G-rich	Low_complexity	1	142	(0)	1396368
242	27.9	17.2	0.9	chr16	1959282	1959393	(88378952)	+	L2a	LINE/L2	3267	3400	(26)	1396716
186	25.4	7.0	2.9	chr16	1960689	1960757	(88377588)	C	MIR3	SINE/MIR	(34)	174	103	1396718
274	34.4	8.6	0.8	chr16	1960842	1960970	(88377375)	+	MIRb	SINE/MIR	120	259	(9)	1396719
660	16.7	1.8	0.0	chr16	2151107	2151214	(88187131)	C	AluJo	SINE/Alu	(11)	301	192	1396962
235	17.4	9.2	1.4	chr16	2215546	2215615	(88122730)	C	L1ME3	LINE/L1	(3)	6159	6084	1397045
13	21.1	2.6	0.0	chr16	2514189	2514226	(87824119)	+	G-rich	Low_complexity	1	39	(0)	1397556
16	4.5	0.0	0.0	chr16	2969361	2969383	(87368962)	+	(GCC)n	Simple_repeat	1	23	(0)	1398274
15	21.8	0.0	8.7	chr16	3028141	3028215	(87310130)	+	(CGGCG)n	Simple_repeat	1	68	(0)	1398353
13	8.8	0.0	12.8	chr16	3028306	3028352	(87309993)	+	(CCCGC)n	Simple_repeat	1	47	(0)	1398354
654	1.4	0.0	0.0	chr16	3157405	3157477	(87180868)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	1398614
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
204	27.6	11.5	4.7	chr16	3283093	3283221	(87055124)	+	MER5B	DNA/hAT-Charlie	30	168	(10)	1398902
189	22.0	0.0	3.9	chr16	4271706	4271757	(86066588)	+	AmnSINE1	SINE/5S-Deu-L2	76	125	(450)	1400801
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
13	21.9	2.3	2.2	chr16	4476448	4476491	(85861854)	+	(GACAGGC)n	Simple_repeat	1	45	(0)	1401226
18	29.8	1.3	2.6	chr16	9091996	9092072	(81246273)	+	GA-rich	Low_complexity	1	78	(0)	1410575
12	8.4	0.0	6.9	chr16	9092305	9092333	(81246012)	+	(CCGGC)n	Simple_repeat	1	29	(0)	1410576
28	18.4	0.0	0.0	chr16	10181188	10181238	(80157107)	+	(CA)n	Simple_repeat	1	51	(0)	1412842
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
24	29.2	0.0	5.8	chr16	14071388	14071446	(76266899)	+	G-rich	Low_complexity	1	120	(0)	1421472
13	7.6	1.5	7.6	chr16	14071539	14071573	(76266772)	+	G-rich	Low_complexity	1	32	(0)	1421473
187	30.8	1.1	4.2	chr16	15601536	15601630	(74736715)	+	L2c	LINE/L2	3034	3125	(262)	1424796
422	28.7	0.7	2.0	chr16	17084138	17084290	(73254055)	+	MIR	SINE/MIR	56	206	(56)	1428282
272	27.1	15.0	4.0	chr16	17166314	17166413	(73171932)	+	L2c	LINE/L2	3256	3380	(7)	1428456
197	34.6	0.0	4.9	chr16	17166423	17166504	(73171841)	+	L2b	LINE/L2	3275	3352	(23)	1428457
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
14	21.5	2.2	2.2	chr16	22206227	22206271	(68132074)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1439529
36	0.0	4.9	0.0	chr16	23027135	23027175	(67311170)	+	(TTTCTTTT)n	Simple_repeat	1	43	(0)	1441323
23	30.6	1.2	0.0	chr16	23510378	23510461	(66827884)	+	(CCGCCG)n	Simple_repeat	1	85	(0)	1442438
451	8.2	1.4	1.4	chr16	23510637	23510710	(66827635)	C	MER53	DNA/hAT	(0)	193	120	1442439
1610	28.6	6.9	4.2	chr16	24178829	24179393	(66158952)	C	MLT1K	LTR/ERVL-MaLR	(13)	582	2	1444046
705	26.9	4.4	0.0	chr16	28303994	28304209	(62034136)	+	L1ME4b	LINE/L1	315	540	(352)	1453146
586	21.0	12.7	1.1	chr16	28304396	28304576	(62033769)	+	MIRb	SINE/MIR	20	225	(43)	1453147
2010	9.1	0.0	8.1	chr16	29748138	29748184	(60590161)	+	AluY	SINE/Alu	28	74	(237)	1456468
6355	9.8	28.0	0.1	chr16	29748185	29749320	(60589025)	+	LTR12C	LTR/ERV1	3	1579	(0)	1456469
13	23.5	0.0	0.0	chr16	29900111	29900145	(60438200)	+	(GCCCG)n	Simple_repeat	1	35	(0)	1456817
16	16.9	0.0	0.0	chr16	29900223	29900255	(60438090)	+	(CCGA)n	Simple_repeat	1	33	(0)	1456818
16	21.8	5.0	1.6	chr16	29900306	29900365	(60437980)	+	(CCGCC)n	Simple_repeat	1	63	(0)	1456819
12	25.5	3.8	1.8	chr16	29926074	29926126	(60412219)	+	(GCGCCCT)n	Simple_repeat	1	55	(0)	1456879
11	17.1	2.9	2.8	chr16	29995281	29995315	(60343030)	+	(CCTCCG)n	Simple_repeat	1	36	(0)	1457035
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
378	32.1	1.2	12.0	chr16	30021886	30021966	(60316379)	+	MIR	SINE/MIR	83	154	(108)	1457091
14	16.4	2.2	5.5	chr16	30112812	30112858	(60225487)	+	G-rich	Low_complexity	1	45	(0)	1457286
351	23.1	6.1	0.0	chr16	30112891	30112998	(60225347)	C	MER91C	DNA/hAT-Tip100	(22)	118	4	1457287
305	34.5	3.8	4.7	chr16	30677955	30678167	(59660178)	+	MIRb	SINE/MIR	50	260	(8)	1458624
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
15	18.7	4.3	4.2	chr16	31142906	31142951	(59195394)	+	(GC)n	Simple_repeat	1	48	(0)	1459691
2214	10.8	0.0	1.0	chr16	31180911	31181215	(59157130)	C	AluSx1	SINE/Alu	(10)	302	1	1459795
2337	6.0	0.0	0.0	chr16	31442302	31442618	(58895727)	C	AluSx4	SINE/Alu	(0)	310	1	1460321
14	8.2	3.9	0.0	chr16	46831050	46831075	(43507270)	+	(CCGC)n	Simple_repeat	1	27	(0)	1466114
676	24.5	15.7	3.4	chr16	46883542	46883803	(43454542)	C	L2a	LINE/L2	(0)	3426	3127	1466254
221	26.4	5.3	4.0	chr16	46883797	46883871	(43454474)	C	MIRb	SINE/MIR	(73)	195	120	1466255
13	25.7	2.1	2.0	chr16	46973349	46973396	(43364949)	+	(CCG)n	Simple_repeat	1	49	(0)	1466442
14	23.2	5.3	1.7	chr16	47461027	47461083	(42877262)	+	(GCC)n	Simple_repeat	1	60	(0)	1467211
13	28.8	0.0	3.5	chr16	47461309	47461366	(42876979)	+	G-rich	Low_complexity	1	58	(0)	1467212
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
376	32.0	0.0	3.2	chr16	56013967	56014092	(34324253)	+	MIRb	SINE/MIR	118	239	(29)	1482380
186	24.3	14.2	7.2	chr16	57244777	57244887	(33093458)	C	MIRc	SINE/MIR	(30)	238	119	1484628
17	29.4	0.0	3.0	chr16	57284711	57284776	(33053569)	+	(CCG)n	Simple_repeat	1	66	(0)	1484720
21	20.2	0.0	4.8	chr16	58025806	58025867	(32312478)	+	(CGCT)n	Simple_repeat	1	62	(0)	1486285
18	17.6	0.0	0.0	chr16	58734013	58734044	(31604301)	+	(GT)n	Simple_repeat	1	32	(0)	1487741
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
181	20.8	15.4	4.9	chr16	66608573	66608653	(23729692)	+	MIRc	SINE/MIR	14	104	(164)	1500053
203	37.8	0.0	3.0	chr16	66880966	66881096	(23457249)	C	MIRb	SINE/MIR	(116)	152	26	1500614
206	28.6	6.7	0.0	chr16	67018005	67018060	(23320285)	C	MER91C	DNA/hAT-Tip100	(30)	110	51	1500889
13	26.6	0.0	0.0	chr16	67109951	67109987	(23228358)	+	(CCG)n	Simple_repeat	1	37	(0)	1501116
15	21.6	3.5	3.4	chr16	67150351	67150407	(23187938)	+	(CGCTCG)n	Simple_repeat	1	59	(0)	1501184
251	30.8	7.1	0.0	chr16	67185693	67185770	(23152575)	+	MIR3	SINE/MIR	64	147	(61)	1501229
2127	12.2	0.3	0.0	chr16	67245464	67245757	(23092588)	+	AluSx	SINE/Alu	1	295	(17)	1501306
13	27.4	1.9	1.8	chr16	67247497	67247550	(23090795)	+	G-rich	Low_complexity	1	55	(0)	1501307
12	25.5	0.0	0.0	chr16	67563295	67563331	(22775014)	+	(CCTG)n	Simple_repeat	1	37	(0)	1501894
18	14.8	7.4	1.7	chr16	67652857	67652910	(22685435)	+	(GCG)n	Simple_repeat	1	58	(0)	1502110
80	4.8	0.0	0.0	chr16	67842863	67842950	(22495395)	+	(GCA)n	Simple_repeat	1	88	(0)	1502468
21	30.9	0.0	4.1	chr16	68235965	68235983	(22102362)	+	G-rich	Low_complexity	1	42	(56)	1503208
21	20.6	3.6	0.0	chr16	68235984	68236039	(22102306)	+	(GCG)n	Simple_repeat	1	58	(0)	1503209
21	30.9	0.0	4.1	chr16	68236040	68236062	(22102283)	+	G-rich	Low_complexity	43	98	(0)	1503208
180	29.8	0.0	0.0	chr16	70347201	70347247	(19991098)	+	MamSINE1	SINE/tRNA-RTE	38	84	(206)	1507782
25	19.9	1.5	2.9	chr16	71289614	71289681	(19048664)	+	G-rich	Low_complexity	1	69	(0)	1509393
2094	12.0	5.8	4.3	chr16	86277111	86277288	(4061057)	C	THE1D	LTR/ERVL-MaLR	(204)	177	1	1536361
225	32.2	2.9	0.0	chr16	86555365	86555456	(3782889)	C	L2a	LINE/L2	(2)	3424	3277	1536837
11	10.6	0.0	10.5	chr16	87317335	87317372	(3020973)	+	(AACCC)n	Simple_repeat	1	38	(0)	1538230
13	4.7	0.0	4.2	chr16	87317392	87317415	(3020930)	+	(CGCC)n	Simple_repeat	1	24	(0)	1538231
14	12.6	0.0	0.0	chr16	87608555	87608581	(2729764)	+	(GGAGA)n	Simple_repeat	1	27	(0)	1538772
2008	13.2	1.0	0.3	chr16	87608757	87609051	(2729294)	+	AluJb	SINE/Alu	2	298	(14)	1538773
606	27.6	8.0	4.7	chr16	87678665	87679025	(2659320)	+	MLT1C	LTR/ERVL-MaLR	79	452	(15)	1538907
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
13	8.7	4.0	0.0	chr16	88650833	88650857	(1687488)	+	(CCCGG)n	Simple_repeat	1	26	(0)	1540271
17	22.9	0.0	2.1	chr16	88651055	88651102	(1687243)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1540272
218	27.9	16.1	1.2	chr16	89009356	89009519	(1328826)	+	MIRc	SINE/MIR	51	235	(33)	1540693
33	24.3	5.0	0.0	chr16	89009723	89009834	(1328511)	+	GA-rich	Low_complexity	1	117	(0)	1540694
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
678	12.0	16.3	1.6	chr17	409699	409823	(82847618)	+	AluJo	SINE/Alu	1	147	(165)	1545159
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
971	9.2	0.8	0.0	chr17	996420	996550	(82260891)	C	AluSx3	SINE/Alu	(179)	132	1	1546196
2410	6.1	1.3	0.0	chr17	1483762	1484055	(81773386)	+	AluSp	SINE/Alu	1	298	(15)	1547227
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
2301	9.0	0.0	3.1	chr17	2725091	2725411	(80532030)	+	AluSx1	SINE/Alu	1	311	(1)	1549783
341	25.9	10.1	3.0	chr17	2750082	2750266	(80507175)	+	MIR3	SINE/MIR	33	238	(30)	1549848
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
673	27.9	8.7	4.0	chr17	4493106	4493378	(78764063)	C	L2c	LINE/L2	(0)	3387	3101	1553204
475	35.8	9.0	4.9	chr17	4493552	4493706	(78763735)	C	L2c	LINE/L2	(377)	3042	2891	1553204
14	4.3	4.2	0.0	chr17	6652336	6652359	(76605082)	+	(GCCA)n	Simple_repeat	1	25	(0)	1557466
13	15.9	2.6	5.0	chr17	7014818	7014856	(76242585)	+	(GCG)n	Simple_repeat	1	40	(0)	1558088
17	26.0	4.1	1.9	chr17	7014959	7015034	(76242407)	+	G-rich	Low_complexity	1	77	(0)	1558089
13	18.3	4.3	4.1	chr17	7242376	7242422	(76015019)	+	(GGC)n	Simple_repeat	1	49	(0)	1558486
258	5.6	0.0	0.0	chr17	7296286	7296334	(75961107)	+	FLAM_C	SINE/Alu	1	34	(99)	1558578
13	6.0	10.8	2.4	chr17	7308014	7308050	(75949391)	+	G-rich	Low_complexity	1	41	(0)	1558610
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
14	24.1	0.0	0.0	chr17	7990074	7990112	(75267329)	+	G-rich	Low_complexity	1	39	(0)	1559894
2590	5.0	0.0	0.0	chr17	8078895	8079195	(75178246)	C	AluY	SINE/Alu	(9)	302	2	1560051
683	17.7	0.0	8.4	chr17	8079196	8079295	(75178146)	+	MER2B	DNA/TcMar-Tigger	243	336	(0)	1560050
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
678	3.9	0.0	0.0	chr17	8226232	8226308	(75031133)	C	tRNA-Thr-ACY	tRNA	(0)	77	1	1560365
15	11.2	3.3	0.0	chr17	8799346	8799375	(74458066)	+	(GGCGGG)n	Simple_repeat	1	31	(0)	1561489
657	24.9	2.7	12.9	chr17	8799618	8799903	(74457538)	+	L2a	LINE/L2	3084	3339	(87)	1561490
12	7.4	0.0	11.1	chr17	9645481	9645516	(73611925)	+	(GCCCC)n	Simple_repeat	1	36	(0)	1563113
509	27.3	5.7	0.5	chr17	17401321	17401504	(65855937)	C	MER91A	DNA/hAT-Tip100	(2)	194	1	1576608
12	8.9	4.2	0.0	chr17	17783342	17783365	(65474076)	+	(GGC)n	Simple_repeat	1	25	(0)	1577346
14	27.1	1.4	5.4	chr17	17783638	17783710	(65473731)	+	(GCCCGC)n	Simple_repeat	1	74	(0)	1577347
12	11.4	10.9	5.6	chr17	18781074	18781137	(64476304)	+	(CTCCGC)n	Simple_repeat	1	71	(0)	1579119
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
1013	15.8	4.1	0.0	chr17	28318592	28318755	(54938686)	C	AluJo	SINE/Alu	(140)	172	2	1588460
26	19.0	2.3	5.6	chr17	28710974	28711060	(54546381)	+	G-rich	Low_complexity	1	89	(0)	1589185
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
12	16.9	2.9	2.8	chr17	30235684	30235718	(53021723)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1592201
16	24.8	4.3	2.7	chr17	30378664	30378733	(52878708)	+	GA-rich	Low_complexity	1	73	(0)	1592484
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
460	32.7	9.0	0.9	chr17	31394573	31394797	(51862644)	C	L3	LINE/CR1	(727)	3372	3128	1594480
18	14.9	0.0	0.0	chr17	31394921	31394950	(51862491)	+	(G)n	Simple_repeat	1	30	(0)	1594483
289	21.6	0.0	0.0	chr17	34703586	34703636	(48553805)	+	UCON85	Unknown	27	77	(3)	1600904
570	25.7	0.7	0.0	chr17	34703881	34704028	(48553413)	C	MamRep564	Unknown	(117)	240	92	1600905
25	21.1	5.3	0.0	chr17	34980634	34980709	(48276732)	+	(CGCGG)n	Simple_repeat	1	80	(0)	1601461
1573	15.6	0.7	4.3	chr17	35142541	35142842	(48114599)	C	AluJr	SINE/Alu	(21)	291	1	1601791
1468	14.8	4.7	6.2	chr17	35448926	35449044	(47808397)	+	AluJb	SINE/Alu	1	117	(195)	1602227
34	0.0	0.0	0.0	chr17	35449045	35449075	(47808366)	+	(ACA)n	Simple_repeat	1	31	(0)	1602228
13	20.5	6.7	0.0	chr17	35741251	35741295	(47516146)	+	(CGCTG)n	Simple_repeat	1	48	(0)	1602707
1957	11.9	0.3	1.7	chr17	36202284	36202585	(47054856)	C	AluSz6	SINE/Alu	(14)	298	1	1603540
396	37.2	7.9	4.2	chr17	36202586	36202759	(47054682)	+	L2	LINE/L2	2758	2947	(472)	1603539
20	13.4	0.0	4.4	chr17	36486832	36486876	(46770565)	+	(GGCG)n	Simple_repeat	1	45	(0)	1604032
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
19	22.2	1.9	0.0	chr17	36948809	36948860	(46308581)	+	(CGCGCA)n	Simple_repeat	1	53	(0)	1604977
18	16.8	6.4	0.0	chr17	38799428	38799474	(44457967)	+	(CGG)n	Simple_repeat	1	50	(0)	1608589
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
26	19.2	1.7	0.0	chr17	39402258	39402316	(43855125)	+	(GCC)n	Simple_repeat	1	60	(0)	1610002
32	6.4	1.9	1.9	chr17	39654147	39654198	(43603243)	+	(TTCA)n	Simple_repeat	1	53	(0)	1610535
292	29.0	0.0	10.6	chr17	39654200	39654255	(43603186)	C	L2a	LINE/L2	(14)	3412	3364	1610536
1042	19.3	0.0	0.0	chr17	39654256	39654421	(43603020)	+	AluJr	SINE/Alu	137	302	(10)	1610537
292	29.0	0.0	10.6	chr17	39654422	39654468	(43602973)	C	L2a	LINE/L2	(63)	3363	3320	1610536
189	32.2	4.1	9.2	chr17	39654612	39654741	(43602700)	+	MIRb	SINE/MIR	29	151	(117)	1610538
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
26	17.6	3.0	1.5	chr17	42098474	42098539	(41158902)	+	G-rich	Low_complexity	1	68	(0)	1614946
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
257	33.0	9.2	1.6	chr17	42184602	42184826	(41072615)	+	L2c	LINE/L2	2989	3238	(149)	1615099
17	12.1	0.0	5.0	chr17	42609505	42609544	(40647897)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	1615974
12	13.9	0.0	8.1	chr17	42609671	42609707	(40647734)	+	(GGCG)n	Simple_repeat	1	37	(0)	1615975
13	20.2	0.0	2.7	chr17	42659145	42659181	(40598260)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1616103
13	15.5	9.3	0.0	chr17	42745050	42745095	(40512346)	+	(GCGCCCC)n	Simple_repeat	1	50	(0)	1616277
12	18.8	2.6	2.6	chr17	42760611	42760648	(40496793)	+	(TCCCCAC)n	Simple_repeat	1	39	(0)	1616314
20	22.3	3.5	0.0	chr17	43022172	43022228	(40235213)	+	(GGC)n	Simple_repeat	1	59	(0)	1616898
14	7.8	0.0	6.5	chr17	43022419	43022449	(40234992)	+	(GGGCG)n	Simple_repeat	1	31	(0)	1616899
12	11.1	0.0	8.6	chr17	43720762	43720796	(39536645)	+	(GCCTCC)n	Simple_repeat	1	35	(0)	1618471
1879	7.3	0.4	0.0	chr17	43721047	43721314	(39536127)	C	AluSx3	SINE/Alu	(0)	311	47	1618472
2570	5.9	0.0	0.0	chr17	44344624	44344926	(38912515)	+	AluSc	SINE/Alu	3	305	(4)	1619758
1176	8.6	8.5	0.0	chr17	44657379	44657540	(38599901)	C	AluSz6	SINE/Alu	(7)	305	129	1620449
310	27.7	9.8	2.3	chr17	44689917	44690110	(38567331)	C	MIRb	SINE/MIR	(47)	221	3	1620501
12	14.1	3.0	2.9	chr17	44967411	44967443	(38289998)	+	(GCCCCA)n	Simple_repeat	1	34	(0)	1621078
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
13	8.1	0.0	6.7	chr17	46772763	46772792	(36484649)	+	(CCCAC)n	Simple_repeat	1	30	(0)	1624687
12	17.0	2.9	2.8	chr17	46923240	46923274	(36334167)	+	(GCGAG)n	Simple_repeat	1	36	(0)	1625000
347	29.2	4.8	5.0	chr17	46964168	46964348	(36293093)	C	MIR3	SINE/MIR	(39)	169	17	1625056
494	22.8	2.8	3.7	chr17	46964583	46964722	(36292719)	C	MIR3	SINE/MIR	(28)	180	35	1625057
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
15	14.9	2.6	2.5	chr17	48101118	48101156	(35156285)	+	G-rich	Low_complexity	1	40	(0)	1627294
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
365	28.5	11.3	0.6	chr17	48817498	48817663	(34439778)	+	MIRc	SINE/MIR	2	187	(81)	1628552
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
326	26.0	14.4	0.7	chr17	50117149	50117269	(33140172)	+	L2b	LINE/L2	3238	3385	(2)	1631183
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
187	28.9	3.8	7.3	chr17	50479170	50479251	(32778190)	+	MIRb	SINE/MIR	36	114	(154)	1631865
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
13	11.4	0.0	6.2	chr17	56914103	56914134	(26343307)	+	(GCGG)n	Simple_repeat	1	32	(0)	1642230
15	19.1	5.3	3.3	chr17	58084143	58084199	(25173242)	+	(GGCC)n	Simple_repeat	1	60	(0)	1644418
210	35.4	9.9	0.8	chr17	58219485	58219612	(25037829)	C	MIR1_Amn	SINE/MIR	(87)	143	3	1644658
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
17	4.0	0.0	3.6	chr17	63445584	63445611	(19811830)	+	(AGGG)n	Simple_repeat	1	28	(0)	1654719
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
26	17.3	4.2	6.1	chr17	64263250	64263344	(18994097)	+	(GCC)n	Simple_repeat	1	99	(0)	1656174
274	19.8	23.5	3.6	chr17	64779130	64779266	(18478175)	+	MIR3	SINE/MIR	20	192	(16)	1657315
13	29.4	1.2	6.0	chr17	64919291	64919373	(18338068)	+	G-rich	Low_complexity	1	84	(0)	1657593
15	28.8	1.9	6.5	chr17	64975604	64975708	(18281733)	+	(ACGCC)n	Simple_repeat	1	107	(0)	1657692
191	23.2	1.4	4.2	chr17	65573198	65573269	(17684172)	C	L2c	LINE/L2	(43)	3344	3275	1658915
307	28.3	5.0	0.9	chr17	66565067	66565180	(16692261)	+	MIRb	SINE/MIR	58	176	(92)	1660468
2672	18.2	3.5	1.8	chr17	66730256	66730807	(16526634)	C	MER41B	LTR/ERV1	(38)	596	75	1660716
443	28.6	5.2	1.2	chr17	68020281	68020446	(15236995)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1663343
187	27.4	0.0	1.9	chr17	68020519	68020570	(15236871)	C	L2a	LINE/L2	(3)	3423	3373	1663344
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
229	23.1	18.9	6.5	chr17	68198743	68198887	(15058554)	C	MIRc	SINE/MIR	(108)	160	2	1663728
9367	7.8	14.7	0.7	chr17	68207675	68209028	(15048413)	+	LTR12C	LTR/ERV1	3	1578	(1)	1663744
13	19.1	0.0	0.0	chr17	68292140	68292169	(14965272)	+	(GCA)n	Simple_repeat	1	30	(0)	1663905
7577	9.9	1.4	1.1	chr17	68774117	68775120	(14482321)	+	LTR13	LTR/ERVK	1	1007	(0)	1664779
13	20.8	4.3	2.1	chr17	72121831	72121876	(11135565)	+	(CGG)n	Simple_repeat	1	48	(0)	1669836
58	30.2	1.8	9.6	chr17	74514143	74514815	(8742626)	+	(TGACAGG)n	Simple_repeat	1	685	(0)	1674300
15	20.2	0.0	6.7	chr17	74852344	74852388	(8405053)	+	(CG)n	Simple_repeat	1	45	(0)	1674875
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
12	6.2	4.9	9.3	chr17	75878098	75878138	(7379303)	+	(AGGC)n	Simple_repeat	1	43	(0)	1676937
28	16.6	1.2	7.0	chr17	75878221	75878305	(7379136)	+	G-rich	Low_complexity	1	86	(0)	1676938
400	36.4	8.4	1.7	chr17	75895536	75895823	(7361618)	+	L2c	LINE/L2	3018	3326	(61)	1676982
2568	5.0	0.0	0.0	chr17	75896053	75896353	(7361088)	C	AluY	SINE/Alu	(9)	302	2	1676983
14	18.3	2.7	0.0	chr17	75979188	75979224	(7278217)	+	(CCCGG)n	Simple_repeat	1	38	(0)	1677148
12	28.6	0.0	5.0	chr17	76353621	76353680	(6903761)	+	G-rich	Low_complexity	1	60	(0)	1677879
605	19.0	9.6	7.7	chr17	76839823	76839910	(6417531)	+	MER3	DNA/hAT-Charlie	132	207	(2)	1678867
399	29.7	19.9	0.7	chr17	76839931	76840367	(6417074)	+	L2b	LINE/L2	2297	2838	(581)	1678869
14	18.9	2.8	0.0	chr17	77528733	77528768	(5728673)	+	G-rich	Low_complexity	1	37	(0)	1680186
17	10.8	0.0	0.0	chr17	77529116	77529145	(5728296)	+	(GCTGG)n	Simple_repeat	1	30	(0)	1680187
2294	10.4	0.3	1.9	chr17	78366845	78367162	(4890279)	+	AluSq2	SINE/Alu	1	313	(0)	1681739
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
837	12.2	0.9	0.0	chr17	80441002	80441116	(2816325)	+	AluJo	SINE/Alu	3	118	(194)	1685019
13	17.6	2.4	4.7	chr17	81537896	81537937	(1719504)	+	(CCCTG)n	Simple_repeat	1	43	(0)	1686375
14	9.6	2.6	7.5	chr17	82231194	82231234	(1026207)	+	(CCCG)n	Simple_repeat	1	38	(0)	1687366
758	9.6	0.8	1.9	chr17	82292212	82292364	(965077)	+	FLAM_C	SINE/Alu	2	145	(157)	1687435
320	29.2	0.9	0.0	chr17	82292819	82292924	(964517)	C	MLT1K	LTR/ERVL-MaLR	(336)	259	153	1687436
61	24.2	1.3	10.3	chr17	82750769	82751153	(506288)	+	(CCCTTC)n	Simple_repeat	1	390	(0)	1688194
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
12	22.1	0.0	0.0	chr18	712651	712682	(79660603)	+	GA-rich	Low_complexity	1	32	(0)	1690298
2736	29.8	2.7	2.8	chr18	3296459	3297771	(77075514)	+	L1PB3	LINE/L1	3	1313	(5550)	1694111
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
250	31.7	0.0	0.0	chr18	9334063	9334122	(71039163)	C	MER5A	DNA/hAT-Charlie	(67)	122	63	1702840
13	15.5	5.6	0.0	chr18	9708301	9708336	(70664949)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1703536
17	13.8	1.8	8.6	chr18	9708337	9708356	(70664929)	+	G-rich	Low_complexity	2	58	(0)	1703537
19	28.8	1.5	0.0	chr18	11689657	11689723	(68683562)	+	(CCGGCC)n	Simple_repeat	1	68	(0)	1706192
1682	24.2	1.9	9.6	chr18	11813271	11813731	(68559554)	+	L1ME1	LINE/L1	4499	4856	(1290)	1706371
1062	14.6	0.0	2.9	chr18	11813732	11813902	(68559383)	+	FRAM	SINE/Alu	1	166	(10)	1706374
1682	20.9	2.4	5.3	chr18	11813903	11814217	(68559068)	+	L1ME1	LINE/L1	4857	5166	(980)	1706371
254	27.7	0.0	0.0	chr18	11995170	11995234	(68378051)	C	MLT1J	LTR/ERVL-MaLR	(114)	334	270	1706754
424	32.8	6.9	2.7	chr18	11995259	11995521	(68377764)	C	MLT1J	LTR/ERVL-MaLR	(237)	275	1	1706754
2186	6.9	0.0	0.7	chr18	21611831	21612107	(58761178)	C	AluSq	SINE/Alu	(5)	308	34	1712919
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
1595	26.6	10.3	2.2	chr18	23291363	23291870	(57081415)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	2	1715935
14	28.1	0.0	0.0	chr18	23689729	23689771	(56683514)	+	(CTG)n	Simple_repeat	1	43	(0)	1716684
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
237	31.2	11.8	0.0	chr18	24427051	24427162	(55946123)	+	MIRc	SINE/MIR	26	152	(116)	1717930
207	29.0	0.0	1.6	chr18	26458501	26458563	(53914722)	+	MIR	SINE/MIR	114	175	(87)	1720946
535	27.5	15.3	7.5	chr18	26458635	26459165	(53914120)	+	L2	LINE/L2	2458	3037	(382)	1720947
51	2.1	0.0	0.0	chr18	26550558	26550605	(53822680)	+	(AC)n	Simple_repeat	1	48	(0)	1721102
1163	20.6	5.4	11.1	chr18	31818927	31819152	(48554133)	+	MER34C2	LTR/ERV1	45	245	(310)	1728246
2755	9.4	0.3	0.3	chr18	31819153	31819527	(48553758)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1728247
1163	20.6	5.4	11.1	chr18	31819528	31819715	(48553570)	+	MER34C2	LTR/ERV1	246	434	(121)	1728246
36	0.0	0.0	2.6	chr18	31943294	31943331	(48429954)	+	(GCGGGG)n	Simple_repeat	1	38	(0)	1728480
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
17	22.0	2.0	2.0	chr18	33440758	33440807	(46932478)	+	(GCG)n	Simple_repeat	1	51	(0)	1730735
13	16.8	0.0	5.4	chr18	45837920	45837956	(34535329)	+	(CCCG)n	Simple_repeat	1	37	(0)	1747505
257	15.2	2.1	0.0	chr18	45838054	45838099	(34535186)	+	MER5A1	DNA/hAT-Charlie	38	84	(82)	1747506
15	19.6	0.0	0.0	chr18	48950154	48950188	(31423097)	+	(CCGCGC)n	Simple_repeat	1	35	(0)	1752708
20	14.0	0.0	2.4	chr18	48950321	48950361	(31422924)	+	(CCT)n	Simple_repeat	1	41	(0)	1752709
1779	12.8	0.3	7.3	chr18	49460833	49461145	(30912140)	+	AluSc	SINE/Alu	2	292	(17)	1753566
16	20.4	4.0	6.3	chr18	49813910	49813985	(30559300)	+	(GGCCGC)n	Simple_repeat	1	79	(0)	1754248
15	16.2	4.7	2.2	chr18	49813962	49814004	(30559281)	+	(GGC)n	Simple_repeat	1	45	(0)	1754249
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
22	11.7	0.0	0.0	chr18	55589681	55589717	(24783568)	+	(TCA)n	Simple_repeat	1	37	(0)	1762871
17	0.0	0.0	0.0	chr18	59308542	59308560	(21064725)	+	(T)n	Simple_repeat	1	19	(0)	1768761
11	26.0	0.0	5.8	chr18	62526814	62526865	(17846420)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1773603
21	25.4	3.4	3.3	chr18	62716075	62716163	(17657122)	+	(CCG)n	Simple_repeat	1	92	(0)	1773934
17	27.3	4.7	4.5	chr18	62716164	62716181	(17657104)	+	(CCTCGG)n	Simple_repeat	1	112	(0)	1773935
68	4.2	1.9	4.5	chr18	73908575	73908682	(6464603)	+	(TCTT)n	Simple_repeat	1	110	(0)	1789201
687	11.7	4.1	0.0	chr18	73908683	73908776	(6464509)	C	AluSg7	SINE/Alu	(19)	290	193	1789202
68	36.2	0.0	0.0	chr19	291432	291684	(58325932)	+	G-rich	Low_complexity	1	253	(0)	1796697
17	2.4	10.4	5.7	chr19	591577	591624	(58025992)	+	(GTGAGGT)n	Simple_repeat	1	53	(0)	1797193
239	27.7	6.7	0.0	chr19	628164	628246	(57989370)	+	MLT1C	LTR/ERVL-MaLR	351	439	(28)	1797249
376	23.4	3.6	0.0	chr19	628465	628571	(57989045)	+	Charlie4a	DNA/hAT-Charlie	286	396	(112)	1797250
11	14.8	4.9	4.7	chr19	1261060	1261100	(57356516)	+	(AGCGCGG)n	Simple_repeat	1	43	(0)	1798477
385	29.2	6.2	3.4	chr19	1261340	1261573	(57356043)	C	L2c	LINE/L2	(214)	3173	2933	1798478
671	1.4	0.0	0.0	chr19	1383362	1383434	(57234182)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1798705
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
12	28.7	0.0	0.0	chr19	1568905	1568946	(57048670)	+	(GCCCCA)n	Simple_repeat	1	42	(0)	1799039
2480	7.6	0.0	0.0	chr19	1945540	1945840	(56671776)	+	AluSx	SINE/Alu	1	301	(11)	1799813
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
13	19.1	2.6	2.6	chr19	3186112	3186149	(55431467)	+	(GCT)n	Simple_repeat	1	39	(0)	1802595
15	8.1	0.0	3.6	chr19	3186131	3186158	(55431458)	+	(CGC)n	Simple_repeat	1	28	(0)	1802596
2299	16.6	8.4	1.6	chr19	3243628	3244062	(55373554)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1802727
416	23.9	3.9	1.4	chr19	3244226	3245438	(55372178)	+	(TG)n	Simple_repeat	1	1260	(0)	1802728
808	30.3	7.2	3.9	chr19	3307664	3307738	(55309878)	+	L2	LINE/L2	2453	2529	(890)	1802893
2702	3.0	0.0	0.0	chr19	3307739	3308039	(55309577)	C	AluY	SINE/Alu	(10)	301	1	1802894
27	11.8	0.0	0.0	chr19	3613229	3613274	(55004342)	+	(CCTCGC)n	Simple_repeat	1	46	(0)	1803648
13	32.3	0.0	1.7	chr19	3721714	3721772	(54895844)	+	GA-rich	Low_complexity	1	59	(0)	1803877
22	27.1	1.1	4.2	chr19	3869029	3869056	(54748560)	+	(CCCCGCG)n	Simple_repeat	1	75	(21)	1804195
13	26.1	4.9	1.6	chr19	3869057	3869117	(54748499)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1804196
22	27.1	1.1	4.2	chr19	3869118	3869123	(54748493)	+	(CCCCGCG)n	Simple_repeat	76	96	(0)	1804195
2182	10.1	3.4	0.0	chr19	3876761	3877047	(54740569)	+	AluSx1	SINE/Alu	1	297	(15)	1804223
595	25.1	5.1	1.8	chr19	4815656	4815825	(53801791)	+	MLT1J	LTR/ERVL-MaLR	27	202	(310)	1806550
12	20.8	1.7	8.3	chr19	5137860	5137918	(53479698)	+	(CCCAG)n	Simple_repeat	1	60	(0)	1807235
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
16	3.2	5.6	5.3	chr19	5404039	5404104	(53213512)	+	(AAAGA)n	Simple_repeat	1	66	(0)	1807889
22	28.0	4.7	0.0	chr19	5404105	5404120	(53213496)	+	GA-rich	Low_complexity	4	89	(0)	1807890
361	22.7	13.1	0.2	chr19	5803483	5803618	(52813998)	C	MIR	SINE/MIR	(15)	253	81	1808886
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
13	15.8	2.7	2.6	chr19	5903566	5903602	(52714014)	+	(CCCTCGG)n	Simple_repeat	1	38	(0)	1809109
20	3.4	0.0	5.9	chr19	6531138	6531171	(52086445)	+	(GCT)n	Simple_repeat	1	34	(0)	1810499
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
180	35.2	3.3	0.0	chr19	7853528	7853615	(50764001)	C	L2a	LINE/L2	(66)	3360	3270	1813860
181	24.4	4.2	3.2	chr19	7853673	7853765	(50763851)	C	L2a	LINE/L2	(339)	3080	2987	1813860
297	29.2	0.0	3.2	chr19	8005998	8006113	(50611503)	+	MIRc	SINE/MIR	47	155	(53)	1814132
12	10.1	8.3	5.8	chr19	8209546	8209593	(50408023)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1814709
2379	7.5	0.0	0.0	chr19	8526047	8526341	(50091275)	+	AluSg4	SINE/Alu	1	295	(15)	1815490
16	17.0	0.0	5.4	chr19	8526342	8526366	(50091250)	+	(TC)n	Simple_repeat	2	25	(0)	1815491
29	0.0	0.0	0.0	chr19	8610423	8610447	(50007169)	+	(AC)n	Simple_repeat	1	25	(0)	1815706
12	22.4	7.7	0.0	chr19	10416972	10417023	(48200593)	+	(GGCGAGG)n	Simple_repeat	1	56	(0)	1819689
354	34.2	6.7	3.7	chr19	10586877	10587064	(48030552)	C	MIR	SINE/MIR	(13)	249	56	1820170
18	20.5	1.9	1.9	chr19	10654293	10654344	(47963272)	+	(CCCG)n	Simple_repeat	1	53	(0)	1820365
14	13.0	0.0	7.7	chr19	10654426	10654464	(47963152)	+	(CGG)n	Simple_repeat	1	39	(0)	1820366
12	22.0	4.8	0.0	chr19	10654506	10654547	(47963069)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	1820367
1140	7.0	1.3	3.2	chr19	10695656	10695813	(47921803)	C	AluSc5	SINE/Alu	(20)	289	135	1820437
569	24.2	8.8	0.4	chr19	10696184	10696411	(47921205)	+	L2a	LINE/L2	2921	3169	(257)	1820438
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
743	28.2	2.8	10.4	chr19	11264700	11264900	(47352716)	+	L2	LINE/L2	2702	2894	(525)	1821868
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
312	13.7	1.4	17.1	chr19	12555338	12555425	(46062191)	+	L1MD	LINE/L1	5489	5562	(680)	1824676
278	27.5	12.1	0.8	chr19	12723377	12723508	(45894108)	+	MIR	SINE/MIR	8	156	(106)	1825079
11	29.4	1.5	4.4	chr19	12792580	12792646	(45824970)	+	(AAGCGG)n	Simple_repeat	1	68	(0)	1825218
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
13	18.3	2.6	2.5	chr19	12957099	12957137	(45660479)	+	(CCGCGG)n	Simple_repeat	1	40	(0)	1825617
601	29.1	9.1	0.8	chr19	13442130	13442392	(45175224)	C	LTR16C	LTR/ERVL	(24)	465	179	1826786
1198	9.2	0.0	0.0	chr19	13747480	13747631	(44869985)	C	AluSq	SINE/Alu	(22)	291	140	1827686
15	27.9	4.6	0.0	chr19	13817794	13817858	(44799758)	+	(TGGCGC)n	Simple_repeat	1	68	(0)	1827885
14	21.2	0.0	7.1	chr19	15379968	15380023	(43237593)	+	(GCCCC)n	Simple_repeat	1	56	(0)	1831697
16	30.9	1.4	1.4	chr19	15380240	15380308	(43237308)	+	(GGC)n	Simple_repeat	1	70	(0)	1831698
17	14.2	0.0	0.0	chr19	15380373	15380403	(43237213)	+	(CCT)n	Simple_repeat	1	31	(0)	1831699
199	13.9	12.2	0.0	chr19	17306083	17306125	(41311491)	C	MIRc	SINE/MIR	(136)	132	84	1835990
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
213	31.0	2.5	7.2	chr19	17932364	17932488	(40685128)	+	MIR3	SINE/MIR	18	136	(72)	1837661
218	32.5	19.1	1.7	chr19	18239368	18239539	(40378077)	+	MIR	SINE/MIR	15	223	(45)	1838438
1696	12.3	0.0	0.0	chr19	18239744	18239970	(40377646)	+	AluSz	SINE/Alu	1	227	(85)	1838439
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
209	30.3	3.3	3.3	chr19	19191934	19192025	(39425591)	C	MIR3	SINE/MIR	(116)	92	1	1840465
13	17.5	0.0	2.9	chr19	19405656	19405689	(39211927)	+	(GCCCC)n	Simple_repeat	1	34	(0)	1840930
1726	12.8	0.3	17.4	chr19	20103008	20103422	(38514194)	C	LTR14B	LTR/ERVK	(0)	608	1	1842097
15	7.5	3.6	0.0	chr19	29525383	29525410	(29092206)	+	(CCCCA)n	Simple_repeat	1	29	(0)	1850364
5553	7.3	9.4	0.1	chr19	32693106	32693854	(25923762)	C	LTR12	LTR/ERV1	(0)	826	1	1855322
2024	23.3	4.8	7.6	chr19	32719307	32719544	(25898072)	C	LTR8	LTR/ERV1	(475)	216	2	1855368
325	26.2	10.5	0.7	chr19	33767821	33767966	(24849650)	+	MamRep1879	DNA/hAT-Tip100?	51	212	(4)	1857283
344	22.2	2.2	4.3	chr19	34364781	34364874	(24252742)	+	L2a	LINE/L2	3335	3426	(0)	1858494
418	12.3	1.3	6.2	chr19	34364894	34364974	(24252642)	C	AluJo	SINE/Alu	(60)	252	176	1858496
21	9.2	1.8	8.8	chr19	34365094	34365158	(24252458)	+	G-rich	Low_complexity	1	60	(0)	1858497
825	13.7	0.0	0.8	chr19	34404033	34404156	(24213460)	+	FLAM_C	SINE/Alu	11	133	(10)	1858560
423	20.0	0.0	0.0	chr19	34404168	34404242	(24213374)	C	L1MC5a	LINE/L1	(635)	2142	2068	1858561
560	10.3	2.5	0.0	chr19	34678152	34678229	(23939387)	C	AluSz	SINE/Alu	(224)	88	9	1858989
322	35.6	8.0	0.0	chr19	35090684	35090832	(23526784)	C	MIR	SINE/MIR	(0)	262	101	1859690
19	6.3	0.0	5.3	chr19	35091339	35091355	(23526261)	+	(TTA)n	Simple_repeat	1	17	(0)	1859691
2122	11.5	0.3	0.0	chr19	35091356	35091642	(23525974)	+	AluSx	SINE/Alu	1	288	(24)	1859692
574	24.5	17.3	0.0	chr19	35247509	35247821	(23369795)	C	L2a	LINE/L2	(241)	3185	2797	1860019
12	14.6	0.0	5.9	chr19	35545823	35545856	(23071760)	+	G-rich	Low_complexity	1	34	(0)	1860636
14	16.9	0.0	2.9	chr19	35702827	35702861	(22914755)	+	(AGTGGA)n	Simple_repeat	1	35	(0)	1861017
2317	7.4	0.0	0.3	chr19	35703028	35703323	(22914293)	C	AluSx1	SINE/Alu	(17)	295	1	1861018
12	15.9	9.5	0.0	chr19	35797699	35797740	(22819876)	+	G-rich	Low_complexity	1	46	(0)	1861159
432	27.7	5.7	2.9	chr19	35797947	35798117	(22819499)	+	L2b	LINE/L2	3185	3360	(15)	1861160
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
691	29.5	10.1	0.7	chr19	35829069	35829372	(22788244)	+	MLT1K	LTR/ERVL-MaLR	12	347	(248)	1861262
16	0.0	0.0	0.0	chr19	35900075	35900092	(22717524)	+	(C)n	Simple_repeat	1	18	(0)	1861404
390	35.1	4.6	2.1	chr19	35963486	35963674	(22653942)	C	MIRb	SINE/MIR	(29)	239	46	1861563
249	25.0	5.6	4.5	chr19	35975596	35975683	(22641933)	C	MIR	SINE/MIR	(6)	256	168	1861595
295	19.3	0.0	0.0	chr19	35975979	35976035	(22641581)	C	L2a	LINE/L2	(0)	3426	3370	1861596
34	24.4	3.1	1.0	chr19	36214072	36214169	(22403447)	+	(AC)n	Simple_repeat	1	101	(0)	1862144
15	13.3	0.0	5.4	chr19	36214204	36214240	(22403376)	+	(CACAGG)n	Simple_repeat	1	37	(0)	1862145
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
2037	17.4	11.1	0.0	chr19	37718571	37719001	(20898615)	+	MER31A	LTR/ERV1	1	485	(0)	1864965
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
15	26.1	1.4	4.3	chr19	38388628	38388716	(20228900)	+	(CCCCTCC)n	Simple_repeat	1	86	(0)	1866554
12	20.6	3.8	8.5	chr19	38388723	38388801	(20228815)	+	(GCCGGA)n	Simple_repeat	1	82	(0)	1866555
13	22.5	2.0	3.9	chr19	39834170	39834219	(18783397)	+	(CCTCC)n	Simple_repeat	1	51	(0)	1869713
270	28.1	4.6	4.6	chr19	39996743	39996850	(18620766)	C	L2c	LINE/L2	(0)	3387	3280	1870082
725	20.8	6.4	10.7	chr19	40512230	40512509	(18105107)	C	L2b	LINE/L2	(2)	3373	3107	1871281
21	24.2	2.2	5.4	chr19	40513021	40513111	(18104505)	+	(GGC)n	Simple_repeat	1	93	(0)	1871282
28	19.2	0.0	0.0	chr19	40605493	40605551	(18012065)	+	(GGCGGA)n	Simple_repeat	1	59	(0)	1871506
17	30.2	0.0	1.8	chr19	41225808	41225862	(17391754)	+	(TG)n	Simple_repeat	1	55	(0)	1872925
647	30.0	10.5	5.1	chr19	42140487	42140837	(16476779)	+	L2b	LINE/L2	3004	3375	(0)	1874665
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
17	31.5	0.0	2.7	chr19	44757775	44757849	(13859767)	+	(CCGGCT)n	Simple_repeat	1	75	(0)	1879542
15	19.9	0.0	4.5	chr19	44808301	44808344	(13809272)	+	G-rich	Low_complexity	1	44	(0)	1879682
12	23.6	7.6	1.4	chr19	44844643	44844708	(13772908)	+	(CCCGCCT)n	Simple_repeat	1	71	(0)	1879783
14	18.3	2.7	0.0	chr19	44844880	44844916	(13772700)	+	(AGCCC)n	Simple_repeat	1	38	(0)	1879784
14	26.0	1.9	1.9	chr19	44844984	44845035	(13772581)	+	G-rich	Low_complexity	1	53	(0)	1879785
18	8.5	0.0	0.0	chr19	45039357	45039381	(13578235)	+	(A)n	Simple_repeat	1	25	(0)	1880309
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
15	4.7	0.0	0.0	chr19	45152511	45152532	(13465084)	+	(CTG)n	Simple_repeat	1	22	(0)	1880570
70	0.0	0.0	0.0	chr19	45770205	45770266	(12847350)	+	(CAG)n	Simple_repeat	1	62	(0)	1882221
12	16.3	7.0	2.2	chr19	45770291	45770333	(12847283)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	1882222
12	18.3	0.0	3.0	chr19	45770724	45770756	(12846860)	+	(CCCGCC)n	Simple_repeat	1	33	(0)	1882223
891	21.0	0.0	3.8	chr19	45817400	45817612	(12800004)	C	AluJo	SINE/Alu	(0)	312	121	1882324
292	27.2	7.2	0.0	chr19	46489892	46489994	(12127622)	C	L2a	LINE/L2	(2)	3373	3263	1883812
13	11.1	2.1	10.2	chr19	46648854	46648901	(11968715)	+	G-rich	Low_complexity	1	49	(0)	1884194
13	22.4	0.0	4.4	chr19	46648965	46649009	(11968607)	+	(GGCGTG)n	Simple_repeat	1	45	(0)	1884195
14	30.0	1.9	0.0	chr19	46787632	46787684	(11829932)	+	(AGC)n	Simple_repeat	1	54	(0)	1884539
17	22.8	5.9	1.4	chr19	46787722	46787789	(11829827)	+	(CCACCG)n	Simple_repeat	1	72	(0)	1884540
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
12	25.8	0.0	0.0	chr19	47273279	47273315	(11344301)	+	G-rich	Low_complexity	1	37	(0)	1885715
238	34.6	3.9	0.0	chr19	47698016	47698114	(10919502)	C	L2b	LINE/L2	(23)	3352	3264	1886807
307	33.2	7.3	1.7	chr19	47698299	47698490	(10919126)	+	MIR	SINE/MIR	18	222	(46)	1886808
14	16.1	10.5	1.6	chr19	47713361	47713368	(10904248)	+	(CGTCC)n	Simple_repeat	1	22	(41)	1886851
15	18.4	2.7	0.0	chr19	47713369	47713405	(10904211)	+	(CCCT)n	Simple_repeat	1	38	(0)	1886852
14	16.1	10.5	1.6	chr19	47713406	47713417	(10904199)	+	(CGTCC)n	Simple_repeat	23	63	(0)	1886851
15	22.3	2.0	2.0	chr19	48398571	48398619	(10218997)	+	(CCGCGG)n	Simple_repeat	1	50	(0)	1888659
19	31.0	1.1	3.2	chr19	48398869	48398960	(10218656)	+	G-rich	Low_complexity	1	93	(0)	1888660
1942	14.5	1.9	1.6	chr19	48657609	48657919	(9959697)	C	AluJb	SINE/Alu	(0)	312	1	1889315
1178	27.7	6.0	6.4	chr19	48657973	48658070	(9959546)	C	L2a	LINE/L2	(303)	3123	3029	1889316
2452	6.8	0.0	0.3	chr19	48658071	48658366	(9959250)	C	AluY	SINE/Alu	(15)	296	2	1889317
2419	7.6	0.0	0.7	chr19	48811212	48811514	(9806102)	+	AluSx1	SINE/Alu	2	302	(10)	1889666
298	21.0	6.9	1.2	chr19	48872685	48872766	(9744850)	C	MSR1	Satellite	(18)	93	7	1889835
650	14.1	0.9	0.3	chr19	49427616	49427927	(9189689)	C	MSR1	Satellite	(16)	313	1	1891082
29	0.0	0.0	0.0	chr19	49591791	49591818	(9025798)	+	(GCCGG)n	Simple_repeat	1	28	(0)	1891492
248	27.6	1.3	0.0	chr19	49690332	49690415	(8927201)	+	MIR1_Amn	SINE/MIR	62	151	(79)	1891688
648	10.3	1.2	1.5	chr19	49691899	49692217	(8925399)	C	MSR1	Satellite	(12)	318	1	1891689
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
1859	11.0	6.5	0.7	chr19	50026289	50026580	(8591036)	+	AluSx1	SINE/Alu	3	312	(0)	1892448
12	17.3	10.0	3.9	chr19	50325680	50325749	(8291867)	+	(GGCGCGC)n	Simple_repeat	1	77	(0)	1893278
2332	11.5	0.0	0.0	chr19	50329985	50330296	(8287320)	+	AluSx1	SINE/Alu	1	312	(0)	1893283
1288	16.6	14.8	0.0	chr19	50795494	50795740	(7821876)	C	AluJr	SINE/Alu	(20)	292	3	1894368
290	26.2	3.6	0.0	chr19	51480732	51480811	(7136805)	C	MLT1E1	LTR/ERVL-MaLR	(569)	85	3	1895711
303	32.6	6.7	1.6	chr19	51480840	51481023	(7136593)	+	MIRb	SINE/MIR	20	213	(55)	1895712
207	25.8	3.1	1.6	chr19	51607907	51607969	(7009647)	+	MIR3	SINE/MIR	86	149	(59)	1895888
1871	24.2	16.4	5.4	chr19	53594992	53595634	(5021982)	C	LTR8A	LTR/ERV1	(0)	727	1	1899671
2187	6.9	4.3	0.3	chr19	53809251	53809541	(4808075)	+	AluSc	SINE/Alu	1	303	(6)	1900309
26	0.0	0.0	0.0	chr19	53903304	53903328	(4714288)	+	(TGTTT)n	Simple_repeat	1	25	(0)	1900547
463	13.9	3.4	0.0	chr19	53903368	53903453	(4714163)	C	Charlie4a	DNA/hAT-Charlie	(37)	471	383	1900548
2560	8.0	0.0	0.0	chr19	53927556	53927868	(4689748)	+	AluSq2	SINE/Alu	1	313	(0)	1900586
34	0.0	0.0	0.0	chr19	53980058	53980086	(4637530)	+	(GT)n	Simple_repeat	1	29	(0)	1900731
15	23.2	0.0	0.0	chr19	53980087	53980114	(4637502)	+	(GC)n	Simple_repeat	1	28	(0)	1900732
650	12.5	1.6	0.5	chr19	54095477	54095856	(4521760)	C	MSR1	Satellite	(8)	384	1	1901066
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
22	23.9	3.5	0.0	chr19	55180268	55180324	(3437292)	+	(GT)n	Simple_repeat	1	59	(0)	1903171
2275	7.8	0.3	1.4	chr19	55217459	55217753	(3399863)	+	AluSx1	SINE/Alu	1	292	(20)	1903255
215	38.5	1.9	1.9	chr19	55220566	55220671	(3396945)	C	L2b	LINE/L2	(5)	3370	3265	1903265
290	22.1	15.2	7.9	chr19	55475845	55475996	(3141620)	+	MER20	DNA/hAT-Charlie	51	215	(4)	1903813
198	31.6	8.7	0.0	chr19	55504085	55504179	(3113437)	C	MIRb	SINE/MIR	(95)	173	70	1903859
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
195	32.9	1.4	0.0	chr19	55640488	55640557	(2977059)	+	MIRc	SINE/MIR	112	182	(86)	1904218
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
910	15.5	4.5	0.0	chr19	57815132	57815279	(802337)	+	FRAM	SINE/Alu	6	160	(16)	1908374
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
13	21.7	4.7	6.7	chr19	58408437	58408521	(209095)	+	(CAACGCC)n	Simple_repeat	1	89	(0)	1909481
6455	13.9	14.4	5.6	chr2	10601	12198	(242181331)	C	TAR1	Satellite/telo	(218)	1893	132	1910812
17	22.3	3.7	5.9	chr2	676986	677067	(241516462)	+	(GGCCC)n	Simple_repeat	1	85	(0)	1911465
250	11.1	2.2	0.0	chr2	2613547	2613591	(239579938)	C	L1M6	LINE/L1	(5901)	595	550	1913479
194	27.3	0.0	0.0	chr2	2613680	2613723	(239579806)	+	LFSINE_Vert	SINE/tRNA	358	401	(58)	1913480
16	9.7	0.0	0.0	chr2	3519872	3519893	(238673636)	+	(A)n	Simple_repeat	1	22	(0)	1914570
644	27.5	9.0	3.9	chr2	9145449	9145679	(233047850)	+	MIR	SINE/MIR	1	244	(24)	1922424
452	31.2	4.0	2.3	chr2	9770517	9770733	(232422796)	C	MIR	SINE/MIR	(43)	225	2	1923619
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
399	11.5	14.5	6.2	chr2	10120423	10120535	(232072994)	+	FLAM_C	SINE/Alu	12	135	(8)	1924224
2121	7.2	0.4	0.4	chr2	10213748	10214011	(231979518)	C	AluSp	SINE/Alu	(48)	265	2	1924403
496	5.3	0.0	0.0	chr2	10214027	10214083	(231979446)	+	AluSq	SINE/Alu	218	274	(39)	1924404
589	5.1	0.0	0.0	chr2	10214077	10214154	(231979375)	C	LTR5_Hs	LTR/ERVK	(890)	78	1	1924405
561	21.5	6.3	0.0	chr2	10214157	10214305	(231979224)	C	Zaphod3	DNA/hAT-Tip100	(1952)	671	513	1924406
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
23	17.6	0.0	1.9	chr2	11482823	11482875	(230710654)	+	G-rich	Low_complexity	1	53	(0)	1926725
59	31.3	0.6	0.0	chr2	11483150	11483342	(230710187)	+	(TG)n	Simple_repeat	1	194	(0)	1926726
16	20.9	0.0	0.0	chr2	12717603	12717635	(229475894)	+	(T)n	Simple_repeat	1	33	(0)	1928770
362	27.8	20.7	0.0	chr2	16105365	16105546	(226087983)	C	MIR	SINE/MIR	(37)	231	1	1933954
13	16.9	0.0	8.5	chr2	17538994	17539040	(224654489)	+	(CCGCGCT)n	Simple_repeat	1	47	(0)	1936102
14	28.4	1.3	5.0	chr2	25216226	25216304	(216977225)	+	(GGCGCCC)n	Simple_repeat	1	80	(0)	1947541
250	33.6	12.1	1.7	chr2	25673989	25674276	(216519253)	C	L2c	LINE/L2	(38)	3349	3028	1948351
18	11.6	0.0	4.9	chr2	27032889	27032929	(215160600)	+	G-rich	Low_complexity	1	41	(0)	1951084
16	19.6	0.0	4.4	chr2	27033067	27033111	(215160418)	+	(CGG)n	Simple_repeat	1	45	(0)	1951085
354	25.5	15.2	1.6	chr2	27033254	27033456	(215160073)	C	MIR3	SINE/MIR	(39)	229	1	1951086
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
17	7.0	3.3	0.0	chr2	27071533	27071562	(215121967)	+	(CCACGG)n	Simple_repeat	1	31	(0)	1951129
16	22.3	4.0	5.1	chr2	27071773	27071847	(215121682)	+	(GGCTGG)n	Simple_repeat	1	78	(0)	1951130
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
540	26.1	9.3	1.0	chr2	27265599	27265868	(214927661)	+	L2c	LINE/L2	3090	3406	(20)	1951465
237	34.1	2.4	0.0	chr2	27265958	27266039	(214927490)	+	L2c	LINE/L2	3122	3205	(182)	1951466
14	31.9	0.0	0.0	chr2	27442515	27442568	(214750961)	+	(CCCGC)n	Simple_repeat	1	54	(0)	1951833
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
729	29.9	4.2	3.5	chr2	30385701	30385960	(211807569)	+	MIRc	SINE/MIR	2	263	(5)	1956903
8339	5.0	1.1	0.2	chr2	30697088	30698085	(211495444)	+	LTR13	LTR/ERVK	1	1007	(0)	1957433
340	29.3	6.2	2.6	chr2	30711474	30711627	(211481902)	+	MIRb	SINE/MIR	82	241	(27)	1957450
1267	23.0	12.4	9.0	chr2	30711628	30712222	(211481307)	+	LTR41C	LTR/ERVL	1	623	(78)	1957451
15	11.2	0.0	3.2	chr2	31138684	31138714	(211054815)	+	(GGGGC)n	Simple_repeat	1	31	(0)	1958027
255	33.8	9.4	1.9	chr2	32165504	32165604	(210027925)	+	MIRb	SINE/MIR	107	221	(47)	1959676
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
13	5.2	0.0	0.0	chr2	41837023	41837042	(200356487)	+	(TGG)n	Simple_repeat	1	20	(0)	1974493
487	30.4	1.9	1.2	chr2	41837187	41837346	(200356183)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1974494
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
232	27.5	9.0	1.5	chr2	44016224	44016356	(198177173)	+	MamRep564	Unknown	88	231	(126)	1978409
11	13.4	4.2	8.0	chr2	44362005	44362052	(197831477)	+	(GAGACGC)n	Simple_repeat	1	50	(0)	1979091
19	15.4	4.8	4.5	chr2	46297161	46297223	(195896306)	+	(GGCAGG)n	Simple_repeat	1	66	(0)	1982053
269	30.6	0.0	3.6	chr2	46704621	46704732	(195488797)	+	MER21B	LTR/ERVL	48	155	(783)	1982671
336	30.0	2.3	3.0	chr2	46704819	46704952	(195488577)	+	MER21B	LTR/ERVL	206	338	(600)	1982671
38	16.8	4.6	0.0	chr2	51032140	51032226	(191161303)	+	GA-rich	Low_complexity	1	91	(0)	1989561
16	10.8	0.0	3.1	chr2	53859602	53859633	(188333896)	+	(GGGT)n	Simple_repeat	1	32	(0)	1993285
999	19.2	7.5	6.3	chr2	54116227	54116620	(188076909)	C	Charlie2b	DNA/hAT-Charlie	(77)	2705	2307	1993802
2729	14.1	6.6	1.4	chr2	54116642	54117158	(188076371)	C	LTR10A	LTR/ERV1	(63)	546	1	1993803
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
2390	7.5	1.6	0.7	chr2	61888897	61889202	(180304327)	C	AluSx1	SINE/Alu	(3)	309	1	2005406
202	21.7	2.8	9.2	chr2	63059414	63059489	(179134040)	+	MIR	SINE/MIR	60	130	(132)	2007381
328	33.6	8.8	9.1	chr2	63059510	63059784	(179133745)	C	L1M4b	LINE/L1	(6375)	492	219	2007382
19	16.6	4.3	0.0	chr2	64524370	64524416	(177669113)	+	(GCGGAG)n	Simple_repeat	1	49	(0)	2009513
184	29.6	5.8	1.0	chr2	64859572	64859670	(177333859)	C	MIRb	SINE/MIR	(124)	144	41	2010076
369	24.6	19.3	0.0	chr2	65226997	65227130	(176966399)	C	MIRb	SINE/MIR	(76)	192	27	2010875
295	14.7	0.0	0.8	chr2	65227315	65227374	(176966155)	+	L1MC4a	LINE/L1	6681	6725	(1157)	2010876
11	20.5	2.9	0.0	chr2	68252737	68252770	(173940759)	+	G-rich	Low_complexity	1	35	(0)	2015306
4928	7.8	0.6	0.8	chr2	71275049	71275707	(170917822)	+	L1PA8	LINE/L1	7509	8166	(1)	2020400
456	10.5	13.6	0.0	chr2	71275850	71275925	(170917604)	C	AluJb	SINE/Alu	(53)	259	172	2020404
16	12.3	0.0	5.1	chr2	71275927	71275965	(170917564)	+	(TTTTTCC)n	Simple_repeat	1	39	(0)	2020405
475	26.9	7.8	3.4	chr2	73233800	73234007	(168959522)	+	MIRb	SINE/MIR	19	236	(32)	2023375
12	8.8	4.2	0.0	chr2	74529647	74529670	(167663859)	+	(CGC)n	Simple_repeat	1	25	(0)	2025528
13	8.3	0.0	6.7	chr2	74648174	74648203	(167545326)	+	(GCCCA)n	Simple_repeat	1	30	(0)	2025726
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
13	13.5	6.7	4.2	chr2	85539558	85539602	(156653927)	+	(TCCCT)n	Simple_repeat	1	48	(0)	2041000
15	23.7	0.0	7.3	chr2	86807811	86807878	(155385651)	+	G-rich	Low_complexity	1	68	(0)	2043240
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
12	24.4	4.4	4.2	chr2	96321923	96321990	(145871539)	+	(GGAGGC)n	Simple_repeat	1	71	(0)	2051942
789	23.6	3.6	7.6	chr2	99553958	99554219	(142639310)	+	L1ME4a	LINE/L1	5656	5906	(218)	2056652
492	7.0	0.0	0.0	chr2	99554224	99554280	(142639249)	+	AluSq10	SINE/Alu	163	219	(94)	2056654
13	19.6	7.4	1.7	chr2	102619492	102619545	(139573984)	+	(GCGCC)n	Simple_repeat	1	58	(0)	2061316
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
19	24.7	0.0	1.8	chr2	111117216	111117270	(131076259)	+	G-rich	Low_complexity	1	55	(0)	2073124
180	28.5	8.9	3.1	chr2	112181575	112181701	(130011828)	+	L2b	LINE/L2	3213	3347	(28)	2074679
14	8.4	0.0	3.7	chr2	113756357	113756383	(128437146)	+	(CCTG)n	Simple_repeat	1	27	(0)	2077266
11	16.4	5.9	0.0	chr2	113756428	113756461	(128437068)	+	(CCGCGG)n	Simple_repeat	1	36	(0)	2077267
16	19.5	3.6	3.5	chr2	113756650	113756705	(128436824)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	2077268
13	21.9	1.8	7.0	chr2	113756846	113756901	(128436628)	+	GA-rich	Low_complexity	1	57	(0)	2077269
188	25.7	1.3	15.6	chr2	115160778	115160957	(127032572)	+	L2a	LINE/L2	3266	3419	(7)	2079463
1110	21.6	15.1	0.3	chr2	117814109	117814401	(124379128)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	2082798
709	26.6	9.9	6.0	chr2	119106196	119106429	(123087100)	+	MIR	SINE/MIR	4	251	(17)	2084702
682	27.4	9.6	2.2	chr2	119106566	119106796	(123086733)	C	MIRb	SINE/MIR	(15)	253	4	2084703
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
328	35.4	3.7	0.0	chr2	121888343	121888472	(120305057)	+	MIRb	SINE/MIR	120	254	(14)	2089540
19	17.5	3.6	3.5	chr2	127858082	127858137	(114335392)	+	(CGC)n	Simple_repeat	1	58	(0)	2098144
1691	6.8	9.2	7.9	chr2	127859339	127859617	(114333912)	+	AluSx1	SINE/Alu	3	285	(27)	2098148
78	21.8	2.5	1.5	chr2	128664319	128664517	(113529012)	+	(CCTCT)n	Simple_repeat	1	204	(0)	2099546
11	21.6	0.0	4.9	chr2	132489403	132489443	(109704086)	+	G-rich	Low_complexity	1	41	(0)	2104663
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
516	26.5	10.0	4.4	chr2	136527869	136528093	(105665436)	+	MIR	SINE/MIR	14	252	(10)	2110842
13	23.8	2.2	2.1	chr2	138780391	138780436	(103413093)	+	G-rich	Low_complexity	1	47	(0)	2113952
15	24.1	1.4	6.8	chr2	151828341	151828412	(90365117)	+	(GCC)n	Simple_repeat	1	73	(0)	2131422
13	14.3	2.3	6.7	chr2	152335727	152335770	(89857759)	+	G-rich	Low_complexity	1	45	(0)	2132280
33	0.0	2.9	0.0	chr2	152336089	152336123	(89857406)	+	(AAAAC)n	Simple_repeat	1	36	(0)	2132281
21	16.8	1.4	7.1	chr2	159798202	159798270	(82395259)	+	G-rich	Low_complexity	1	70	(0)	2142174
66	0.0	0.0	0.0	chr2	162839063	162839118	(79354411)	+	(AC)n	Simple_repeat	1	56	(0)	2146180
15	30.4	2.5	2.4	chr2	163348534	163348613	(78844916)	+	(CTGCTT)n	Simple_repeat	1	82	(0)	2146828
27	21.4	2.0	5.8	chr2	164621483	164621593	(77571936)	+	G-rich	Low_complexity	1	106	(0)	2148539
15	17.9	0.0	4.8	chr2	165794145	165794186	(76399343)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	2150134
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
24	6.6	0.0	0.0	chr2	166376221	166376252	(75817277)	+	(GT)n	Simple_repeat	1	32	(0)	2150941
22061	10.5	3.0	1.1	chr2	167844236	167849605	(74343924)	+	L1PB1	LINE/L1	6	5731	(1131)	2152700
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
29	0.0	0.0	0.0	chr2	169733603	169733627	(72459902)	+	(CA)n	Simple_repeat	1	25	(0)	2155495
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
16	19.5	1.9	7.3	chr2	172000139	172000192	(70193337)	+	(AC)n	Simple_repeat	1	55	(0)	2159420
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
14	25.2	5.0	3.6	chr2	177392828	177392907	(64800622)	+	G-rich	Low_complexity	1	84	(0)	2167595
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
26	0.0	0.0	0.0	chr2	183038418	183038442	(59155087)	+	(GGC)n	Simple_repeat	1	25	(0)	2174824
16	15.2	2.0	6.0	chr2	183038554	183038602	(59154927)	+	(GGCCCT)n	Simple_repeat	1	50	(0)	2174825
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
54	0.0	0.0	0.0	chr2	190880873	190880920	(51312609)	+	(GCA)n	Simple_repeat	1	48	(0)	2185068
1885	7.4	0.0	0.4	chr2	197485295	197485523	(44708006)	C	AluSx1	SINE/Alu	(83)	229	2	2194138
13	20.8	0.0	0.0	chr2	203328209	203328241	(38865288)	+	G-rich	Low_complexity	1	33	(0)	2203790
12	5.6	0.0	0.0	chr2	203328406	203328424	(38865105)	+	(CCG)n	Simple_repeat	1	19	(0)	2203791
17	18.9	0.0	0.0	chr2	203328488	203328523	(38865006)	+	GA-rich	Low_complexity	1	36	(0)	2203792
190	30.2	1.1	7.5	chr2	204544937	204545029	(37648500)	+	MIR3	SINE/MIR	120	206	(2)	2205784
577	23.6	0.6	0.0	chr2	204546303	204546459	(37647070)	+	MER5A1	DNA/hAT-Charlie	9	166	(0)	2205788
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
12	19.3	4.7	2.2	chr2	205686012	205686054	(36507475)	+	(CCCCT)n	Simple_repeat	1	45	(0)	2207286
188	28.9	0.0	0.0	chr2	205764451	205764495	(36429034)	C	MIR	SINE/MIR	(111)	151	107	2207380
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
199	24.1	13.2	1.2	chr2	207710691	207710770	(34482759)	+	MIR	SINE/MIR	169	259	(3)	2210550
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
16	6.3	5.7	2.7	chr2	216081863	216081897	(26111632)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2222151
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
18	12.1	2.8	0.0	chr2	218568343	218568378	(23625151)	+	(CACG)n	Simple_repeat	1	37	(0)	2226392
15	7.5	0.0	6.2	chr2	218568413	218568444	(23625085)	+	(CCGCC)n	Simple_repeat	1	32	(0)	2226393
231	35.1	8.7	2.9	chr2	219003334	219003506	(23190023)	C	MIRb	SINE/MIR	(31)	237	54	2227184
12	19.4	0.0	5.1	chr2	219570655	219570693	(22622836)	+	(GCCCG)n	Simple_repeat	1	39	(0)	2228141
251	30.0	9.1	2.9	chr2	231297304	231297406	(10896123)	C	MIR3	SINE/MIR	(45)	163	54	2246612
1316	22.6	10.0	0.3	chr2	231297407	231297713	(10895816)	C	MER58B	DNA/hAT-Charlie	(0)	341	2	2246613
7918	4.8	3.6	1.6	chr2	231489551	231490537	(10702992)	C	LTR13	LTR/ERVK	(0)	1007	1	2246978
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
2303	9.1	1.0	0.0	chr2	233867790	233868087	(8325442)	C	AluSg	SINE/Alu	(9)	301	1	2251039
37	2.6	0.0	0.0	chr2	234495921	234495959	(7697570)	+	(CATC)n	Simple_repeat	1	39	(0)	2252075
182	31.5	2.7	0.0	chr2	237085499	237085571	(5107958)	C	L2b	LINE/L2	(13)	3362	3288	2255932
203	35.3	5.6	1.9	chr2	237594026	237594129	(4599400)	+	MIR3	SINE/MIR	90	197	(11)	2256569
19	6.6	3.1	0.0	chr2	238231775	238231806	(3961723)	+	(AAAC)n	Simple_repeat	1	33	(0)	2257541
13	19.3	9.4	0.0	chr2	238239917	238239969	(3953560)	+	G-rich	Low_complexity	1	58	(0)	2257547
7876	7.2	1.7	0.9	chr2	240494822	240495820	(1697709)	+	LTR13	LTR/ERVK	1	1007	(0)	2260093
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
29	29.1	1.3	5.2	chr2	241218397	241218547	(974982)	+	(GGCGG)n	Simple_repeat	1	153	(0)	2260835
2037	6.9	6.7	4.9	chr2	241700957	241701262	(492267)	C	AluSz	SINE/Alu	(0)	312	1	2261582
14	33.7	1.4	0.0	chr20	324166	324235	(64119932)	+	(CCCCGCC)n	Simple_repeat	1	71	(0)	2262661
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
2267	21.6	4.7	8.5	chr20	330952	331404	(64112763)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	248	2262677
14	20.3	2.0	4.0	chr20	675602	675650	(63768517)	+	(GGCGCGG)n	Simple_repeat	1	50	(0)	2263484
13	29.1	0.0	3.5	chr20	675719	675776	(63768391)	+	(CGGCGG)n	Simple_repeat	1	58	(0)	2263485
678	21.8	4.4	6.6	chr20	1118101	1118311	(63325856)	+	MIR	SINE/MIR	35	240	(22)	2264467
182	17.0	2.1	2.1	chr20	2006063	2006110	(62438057)	C	L2b	LINE/L2	(0)	3375	3328	2266090
32	7.4	0.0	0.0	chr20	2652733	2652775	(61791392)	+	(GGGCCT)n	Simple_repeat	1	43	(0)	2267367
14	23.5	3.1	4.5	chr20	3046500	3046564	(61397603)	+	(CGGCG)n	Simple_repeat	1	67	(0)	2268076
14	8.1	0.0	3.6	chr20	3168339	3168366	(61275801)	+	(GGAGG)n	Simple_repeat	1	28	(0)	2268341
15	11.9	5.9	5.6	chr20	3767586	3767636	(60676531)	+	(GGACCG)n	Simple_repeat	1	54	(0)	2269452
12	18.6	2.1	6.1	chr20	3767755	3767802	(60676365)	+	(GCCCCC)n	Simple_repeat	1	49	(0)	2269453
316	27.3	4.1	1.7	chr20	3795777	3795894	(60648273)	+	MIR	SINE/MIR	35	152	(116)	2269516
13	23.8	2.2	2.1	chr20	3820503	3820548	(60623619)	+	(GCGC)n	Simple_repeat	1	47	(0)	2269563
521	13.4	2.4	0.0	chr20	5119169	5119250	(59324917)	+	FLAM_A	SINE/Alu	44	127	(15)	2272054
13	27.4	0.0	3.9	chr20	10218347	10218398	(54225769)	+	(CCCCT)n	Simple_repeat	1	52	(0)	2280183
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
620	19.0	11.7	0.0	chr20	17536887	17537007	(46907160)	+	MLT1B	LTR/ERVL-MaLR	1	137	(253)	2291058
315	8.7	2.1	0.0	chr20	17537004	17537049	(46907118)	+	MLT1B	LTR/ERVL-MaLR	344	390	(0)	2291059
13	22.8	6.2	2.9	chr20	19212223	19212287	(45231880)	+	(CGCTGCT)n	Simple_repeat	1	69	(0)	2293797
28	9.7	0.0	0.0	chr20	21397131	21397174	(43046993)	+	(GCC)n	Simple_repeat	1	44	(0)	2297034
12	24.6	0.0	2.5	chr20	21397449	21397488	(43046679)	+	(CGC)n	Simple_repeat	1	40	(0)	2297035
12	19.1	2.6	2.6	chr20	25058488	25058525	(39385642)	+	(GGCCCAG)n	Simple_repeat	1	39	(0)	2301647
378	23.6	5.4	2.7	chr20	25149032	25149195	(39294972)	+	MIRb	SINE/MIR	1	175	(93)	2301771
582	23.1	3.0	0.8	chr20	25356857	25356986	(39087181)	+	FLAM_C	SINE/Alu	1	133	(10)	2302021
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
609	24.3	8.0	0.0	chr20	31952219	31952391	(32491776)	C	L2a	LINE/L2	(17)	3409	3222	2307264
395	29.8	2.7	2.2	chr20	32359380	32359561	(32084606)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	2308301
14	23.5	4.3	4.1	chr20	33686518	33686587	(30757580)	+	(GCGGC)n	Simple_repeat	1	73	(0)	2311337
13	21.7	5.8	4.1	chr20	34559069	34559137	(29885030)	+	G-rich	Low_complexity	1	73	(0)	2313330
875	25.2	6.1	4.0	chr20	35227353	35227625	(29216542)	+	L3	LINE/CR1	3712	3990	(109)	2314818
398	25.0	9.2	0.0	chr20	35541630	35541737	(28902430)	C	MER5A	DNA/hAT-Charlie	(70)	119	1	2315521
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
8329	3.5	3.3	0.0	chr20	35686723	35687401	(28756766)	+	LTR13	LTR/ERVK	1	709	(298)	2315817
216	33.7	16.4	1.9	chr20	35771389	35771706	(28672461)	C	L2	LINE/L2	(358)	3061	2689	2316008
333	32.7	3.5	0.0	chr20	37389744	37389853	(27054314)	C	MIR3	SINE/MIR	(72)	136	23	2319918
330	22.8	4.8	0.0	chr20	37390003	37390081	(27054086)	C	MIRc	SINE/MIR	(70)	198	116	2319919
416	28.1	0.0	3.4	chr20	37390149	37390266	(27053901)	C	MIR	SINE/MIR	(92)	170	57	2319920
706	21.0	3.7	0.7	chr20	37572804	37572982	(26871185)	C	MIR	SINE/MIR	(64)	204	19	2320294
2240	12.1	0.0	0.0	chr20	37573122	37573410	(26870757)	+	AluSx1	SINE/Alu	1	289	(23)	2320298
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
20	20.2	8.6	3.0	chr20	38692446	38692538	(25751629)	+	(TTCC)n	Simple_repeat	1	101	(0)	2322668
212	35.8	1.2	3.6	chr20	44248427	44248510	(20195657)	C	MIR3	SINE/MIR	(37)	171	90	2333008
486	26.2	8.0	1.2	chr20	44780156	44780317	(19663850)	+	MER104	DNA/TcMar-Tc2	4	177	(4)	2334322
227	22.8	5.0	0.0	chr20	44780459	44780515	(19663652)	+	MamTip2	DNA/hAT-Tip100	82	141	(164)	2334323
577	31.5	12.6	0.6	chr20	44960570	44960882	(19483285)	C	L2a	LINE/L2	(54)	3372	3017	2334744
16	16.9	1.9	5.7	chr20	45824131	45824182	(18619985)	+	G-rich	Low_complexity	1	53	(0)	2336296
207	34.8	13.5	0.0	chr20	45890011	45890145	(18554022)	C	MIR3	SINE/MIR	(19)	189	34	2336485
13	32.3	1.6	0.0	chr20	45935022	45935085	(18509082)	+	(CCTCCG)n	Simple_repeat	1	65	(0)	2336592
226	28.2	5.3	0.0	chr20	45972689	45972785	(18471382)	C	MIR3	SINE/MIR	(97)	171	63	2336666
193	30.1	6.4	0.0	chr20	46230858	46230930	(18213237)	C	MIRb	SINE/MIR	(157)	111	34	2337235
520	33.3	11.0	2.5	chr20	46292960	46293088	(18151079)	+	L2b	LINE/L2	3245	3375	(0)	2337371
19	25.0	2.5	3.6	chr20	47785707	47785787	(16658380)	+	G-rich	Low_complexity	1	83	(0)	2340839
23	14.6	3.6	1.8	chr20	47785854	47785908	(16658259)	+	(CGGCCC)n	Simple_repeat	1	57	(0)	2340840
238	26.5	5.7	2.4	chr20	48523333	48523417	(15920750)	+	UCON12	Unknown	424	511	(9)	2342279
2201	16.1	15.6	1.1	chr20	49281111	49281576	(15162591)	C	LTR10B1	LTR/ERV1	(0)	547	2	2344009
14	26.0	0.0	3.7	chr20	49936321	49936374	(14507793)	+	(GCCCCCC)n	Simple_repeat	1	54	(0)	2345668
397	29.9	4.5	9.3	chr20	49982121	49982378	(14461789)	+	L2b	LINE/L2	3130	3374	(1)	2345773
475	27.8	4.4	1.4	chr20	50115485	50115637	(14328530)	+	MIRb	SINE/MIR	31	194	(74)	2346114
331	20.9	8.9	1.8	chr20	50115691	50115806	(14328361)	C	MIR	SINE/MIR	(0)	230	109	2346115
404	28.8	7.5	5.3	chr20	50456636	50456844	(13987323)	+	L2b	LINE/L2	3018	3231	(144)	2346984
584	27.0	4.8	1.5	chr20	50870586	50870788	(13573379)	C	Charlie8	DNA/hAT-Charlie	(2216)	212	3	2347955
12	20.1	5.0	0.0	chr20	50870869	50870908	(13573259)	+	G-rich	Low_complexity	1	42	(0)	2347956
223	30.0	0.0	1.2	chr20	57351571	57351651	(7092516)	C	MIR3	SINE/MIR	(20)	188	109	2361036
310	34.7	12.9	1.4	chr20	58619581	58619855	(5824312)	C	L2a	LINE/L2	(5)	3421	3111	2363249
608	24.2	2.1	4.1	chr20	58619898	58620091	(5824076)	C	MIR	SINE/MIR	(13)	249	60	2363250
249	30.0	9.1	0.9	chr20	60589810	60589920	(3854247)	C	LTR89	LTR/ERVL?	(486)	393	273	2366182
22	22.4	3.9	2.5	chr20	61952051	61952127	(2492040)	+	(GCACAC)n	Simple_repeat	1	80	(0)	2367934
20	16.9	3.5	3.4	chr20	62407287	62407343	(2036824)	+	(CGCC)n	Simple_repeat	1	59	(0)	2368521
12	22.2	6.4	0.0	chr20	62427433	62427479	(2016688)	+	(CCTGGCT)n	Simple_repeat	1	50	(0)	2368548
2443	7.1	0.0	0.0	chr20	62862278	62862573	(1581594)	+	AluSg	SINE/Alu	1	296	(14)	2369034
656	23.9	6.9	5.7	chr20	63082608	63082908	(1361259)	+	LTR16E1	LTR/ERVL	216	520	(18)	2369253
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
580	23.9	10.1	4.5	chr20	63973530	63973907	(470260)	+	MLT1D	LTR/ERVL-MaLR	29	451	(16)	2370315
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
12	19.1	5.9	3.7	chr21	26170687	26170737	(20539246)	+	(CCG)n	Simple_repeat	1	54	(0)	2393604
13	21.5	3.4	8.7	chr21	26170896	26170984	(20538999)	+	(GGCCCAC)n	Simple_repeat	1	92	(0)	2393605
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
270	20.1	4.2	2.0	chr21	32613147	32613219	(14096764)	C	L2a	LINE/L2	(84)	3342	3254	2403512
250	22.8	10.5	5.9	chr21	32770718	32770892	(13939091)	C	MIR3	SINE/MIR	(58)	210	19	2403727
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
20	26.4	2.5	2.4	chr21	33588685	33588764	(13121219)	+	(CCCCCG)n	Simple_repeat	1	82	(0)	2405244
53	0.0	0.0	0.0	chr21	34202389	34202433	(12507550)	+	(GT)n	Simple_repeat	1	45	(0)	2406265
18	4.8	0.0	0.0	chr21	34202434	34202455	(12507528)	+	(AG)n	Simple_repeat	1	22	(0)	2406266
1478	22.3	12.1	8.2	chr21	36990585	36991247	(9718736)	C	MER21C	LTR/ERVL	(130)	808	18	2410806
13	21.7	0.0	0.0	chr21	37366867	37366898	(9343085)	+	(GGC)n	Simple_repeat	1	32	(0)	2411469
27	23.2	0.0	0.0	chr21	37366986	37367047	(9342936)	+	(GCT)n	Simple_repeat	1	62	(0)	2411470
22	19.3	6.1	3.5	chr21	37367295	37367376	(9342607)	+	(GCC)n	Simple_repeat	1	87	(0)	2411471
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
821	13.8	0.0	0.0	chr21	39183687	39183802	(7526181)	C	AluJo	SINE/Alu	(196)	116	1	2414126
12	9.2	0.0	4.0	chr21	42010306	42010330	(4699653)	+	(CGC)n	Simple_repeat	1	25	(0)	2418306
21	23.4	5.6	2.1	chr21	42010422	42010510	(4699473)	+	G-rich	Low_complexity	1	94	(0)	2418307
1966	12.3	0.3	3.9	chr21	43659016	43659324	(3050659)	+	AluJr	SINE/Alu	1	298	(14)	2420579
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
11	21.8	2.2	4.3	chr21	44801596	44801641	(1908342)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	2422172
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
14	15.5	2.6	2.6	chr21	45429540	45429577	(1280406)	+	(CTCCACT)n	Simple_repeat	1	39	(0)	2422850
18	14.9	0.0	0.0	chr21	45589962	45589991	(1119992)	+	(T)n	Simple_repeat	1	30	(0)	2422966
59	1.9	0.0	0.0	chr21	45646054	45646108	(1063875)	+	(TC)n	Simple_repeat	1	55	(0)	2423036
35	0.0	0.0	0.0	chr21	45646109	45646146	(1063837)	+	(GT)n	Simple_repeat	1	38	(0)	2423037
8118	4.3	0.0	0.7	chr21	46225021	46226027	(483956)	+	LTR13	LTR/ERVK	6	1005	(2)	2423633
15	12.2	0.0	0.0	chr22	17120321	17120347	(33698121)	+	(GTG)n	Simple_repeat	1	27	(0)	2428248
15	20.1	0.0	0.0	chr22	17120597	17120630	(33697838)	+	(GCA)n	Simple_repeat	1	34	(0)	2428249
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
13	18.4	1.2	4.9	chr22	20117489	20117554	(30700914)	+	G-rich	Low_complexity	1	63	(0)	2432925
12	18.1	0.0	3.0	chr22	20117682	20117714	(30700754)	+	G-rich	Low_complexity	1	33	(0)	2432926
16	19.9	0.0	2.4	chr22	20704086	20704127	(30114341)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	2433785
12	22.2	7.7	0.0	chr22	20704302	20704353	(30114115)	+	(GCCGCT)n	Simple_repeat	1	56	(0)	2433786
216	34.1	7.1	0.0	chr22	21001558	21001648	(29816820)	C	MIR	SINE/MIR	(126)	136	39	2434375
14	17.6	0.0	0.0	chr22	21629314	21629345	(29189123)	+	(GCACGT)n	Simple_repeat	1	32	(0)	2435563
11	16.4	5.9	0.0	chr22	23894673	23894706	(26923762)	+	G-rich	Low_complexity	1	36	(0)	2439163
12	28.0	2.3	0.0	chr22	23894956	23894999	(26923469)	+	(CGCGG)n	Simple_repeat	1	45	(0)	2439164
439	26.8	10.6	0.6	chr22	26259813	26259981	(24558487)	C	MamRep564	Unknown	(107)	250	63	2443912
41	0.0	0.0	0.0	chr22	26852221	26852255	(23966213)	+	(CT)n	Simple_repeat	1	35	(0)	2445326
18	18.6	1.8	5.3	chr22	26852256	26852311	(23966157)	+	(CCT)n	Simple_repeat	1	57	(0)	2445327
753	23.1	4.4	2.5	chr22	26922798	26922997	(23895471)	C	MIR	SINE/MIR	(0)	262	59	2445484
21	27.6	0.0	5.4	chr22	28800218	28800309	(22018159)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	2449228
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
1908	14.8	2.0	0.0	chr22	30485063	30485360	(20333108)	+	AluJr	SINE/Alu	5	308	(4)	2452716
289	26.6	4.1	5.2	chr22	30485637	30485790	(20332678)	+	MIRb	SINE/MIR	23	179	(89)	2452717
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
362	23.7	7.6	0.0	chr22	30806509	30806605	(20011863)	C	MIR3	SINE/MIR	(14)	194	90	2453445
375	25.4	3.5	2.6	chr22	32106928	32107040	(18711428)	C	MIR3	SINE/MIR	(10)	198	85	2456387
14	20.8	6.0	0.0	chr22	32176044	32176093	(18642375)	+	(GCCCGCT)n	Simple_repeat	1	53	(0)	2456510
14	4.5	4.3	0.0	chr22	32176160	32176182	(18642286)	+	(GCC)n	Simple_repeat	1	24	(0)	2456511
3206	25.1	6.8	5.5	chr22	32203087	32206587	(18611881)	C	REP522	Satellite/telo	(94)	3546	1	2456556
18	4.8	0.0	0.0	chr22	34415162	34415183	(16403285)	+	(GT)n	Simple_repeat	1	22	(0)	2461000
1460	20.1	5.8	1.7	chr22	35399548	35399846	(15418622)	+	AluJb	SINE/Alu	1	312	(0)	2462903
253	29.3	1.1	7.1	chr22	37608260	37608358	(13210110)	+	MIRb	SINE/MIR	160	252	(16)	2467650
13	21.1	0.0	2.5	chr22	37686622	37686661	(13131807)	+	(TTCTCCC)n	Simple_repeat	1	40	(0)	2467835
423	24.1	10.7	0.0	chr22	37745609	37745752	(13072716)	+	MIRb	SINE/MIR	20	192	(76)	2467967
30	3.1	0.0	0.0	chr22	37805259	37805291	(13013177)	+	(GAGGCA)n	Simple_repeat	1	33	(0)	2468119
2235	6.2	0.4	2.4	chr22	37848993	37849280	(12969188)	C	AluSp	SINE/Alu	(20)	293	12	2468218
28	6.8	0.0	5.8	chr22	38336245	38336296	(12482172)	+	(CCCGC)n	Simple_repeat	1	52	(0)	2469301
12	19.3	4.7	2.2	chr22	38656630	38656672	(12161796)	+	(GGCAGGC)n	Simple_repeat	1	45	(0)	2470029
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
16	4.3	0.0	3.9	chr22	38824868	38824893	(11993575)	+	(CTC)n	Simple_repeat	1	26	(0)	2470347
30	0.0	5.7	0.0	chr22	39399587	39399621	(11418847)	+	(ACA)n	Simple_repeat	1	37	(0)	2471577
187	32.8	1.6	0.0	chr22	40346274	40346334	(10472134)	C	MIR	SINE/MIR	(102)	160	99	2473377
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
17	9.4	2.6	5.1	chr22	41092447	41092484	(9725984)	+	(GCG)n	Simple_repeat	1	39	(0)	2475139
14	25.3	1.8	3.6	chr22	41092589	41092643	(9725825)	+	GA-rich	Low_complexity	1	56	(0)	2475140
12	21.7	0.0	0.0	chr22	41092658	41092689	(9725779)	+	(GGCCG)n	Simple_repeat	1	32	(0)	2475141
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
12	15.3	3.5	0.0	chr22	41833358	41833386	(8985082)	+	(GGTG)n	Simple_repeat	1	30	(0)	2476878
196	25.9	1.1	14.4	chr22	41957507	41957610	(8860858)	+	MIR3	SINE/MIR	86	175	(33)	2477139
16	6.7	2.9	5.6	chr22	41957929	41957963	(8860505)	+	(CGCC)n	Simple_repeat	1	36	(0)	2477140
439	32.1	2.1	0.0	chr22	42294645	42294784	(8523684)	C	MIRb	SINE/MIR	(37)	231	89	2477744
409	25.8	10.0	8.6	chr22	42649681	42650045	(8168423)	+	L2a	LINE/L2	2986	3411	(15)	2478572
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
1333	19.0	16.4	1.6	chr22	43868171	43868614	(6949854)	C	LTR49	LTR/ERV1	(72)	523	1	2480907
229	31.7	0.0	5.8	chr22	44148046	44148132	(6670336)	+	UCON29	DNA/PiggyBac?	1	82	(357)	2481436
2024	13.7	0.0	1.4	chr22	44975885	44976177	(5842291)	+	AluJb	SINE/Alu	1	289	(23)	2482976
184	24.6	1.7	1.7	chr22	45061646	45061703	(5756765)	+	MIRc	SINE/MIR	124	181	(87)	2483148
12	20.4	0.0	9.3	chr22	46297002	46297055	(4521413)	+	G-rich	Low_complexity	1	54	(0)	2485327
13	12.3	0.0	9.3	chr22	49918445	49918487	(899981)	+	G-rich	Low_complexity	1	43	(0)	2489962
961	5.1	0.0	0.8	chr22	49984072	49984189	(834279)	C	AluSz	SINE/Alu	(195)	117	1	2490027
13	26.7	3.6	4.7	chr22	50245308	50245390	(573078)	+	G-rich	Low_complexity	1	86	(0)	2490373
206	24.7	0.0	1.9	chr22	50271032	50271092	(547376)	+	L2b	LINE/L2	3125	3181	(194)	2490388
18	15.8	4.8	0.0	chr22	50583193	50583234	(235234)	+	(CGG)n	Simple_repeat	1	44	(0)	2490907
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
13	0.0	4.3	4.2	chr3	4467162	4467184	(193828375)	+	(CAG)n	Simple_repeat	1	24	(0)	2499047
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
624	24.2	6.6	5.4	chr3	9600432	9600654	(188694905)	C	L1M5	LINE/L1	(2368)	3778	3553	2507529
15	15.1	2.6	2.5	chr3	9600671	9600709	(188694850)	+	G-rich	Low_complexity	1	40	(0)	2507543
14	18.9	2.8	0.0	chr3	9600882	9600917	(188694642)	+	(GGC)n	Simple_repeat	1	37	(0)	2507544
14	12.7	0.0	0.0	chr3	9600975	9601000	(188694559)	+	(CCTG)n	Simple_repeat	1	26	(0)	2507545
403	27.3	9.6	0.0	chr3	9914951	9915100	(188380459)	+	MER91A	DNA/hAT-Tip100	20	185	(11)	2508245
2420	6.9	0.7	0.3	chr3	9986936	9987241	(188308318)	+	AluY	SINE/Alu	3	309	(2)	2508419
210	29.5	16.8	4.7	chr3	10026799	10026926	(188268633)	+	MIRb	SINE/MIR	119	261	(1)	2508499
227	25.0	5.0	0.0	chr3	10142262	10142337	(188153222)	C	MIRc	SINE/MIR	(121)	147	68	2508745
331	30.1	12.1	1.9	chr3	10248046	10248201	(188047358)	+	MIRb	SINE/MIR	60	233	(35)	2509044
302	20.6	4.5	0.0	chr3	10964879	10964941	(187330618)	C	MIRc	SINE/MIR	(156)	112	47	2510460
288	17.7	3.1	0.0	chr3	10964936	10964997	(187330562)	+	MIR	SINE/MIR	86	149	(113)	2510456
428	18.3	0.0	0.0	chr3	11770544	11770625	(186524934)	+	Charlie19a	DNA/hAT-Charlie	149	230	(156)	2512065
12	5.5	0.0	0.0	chr3	13141950	13141968	(185153591)	+	(GCA)n	Simple_repeat	1	19	(0)	2514715
218	34.9	2.0	2.7	chr3	13142195	13142344	(185153215)	C	MIR3	SINE/MIR	(13)	195	47	2514716
466	28.8	14.2	1.7	chr3	13461224	13461520	(184834039)	C	MamGypLTR3a	LTR/Gypsy	(586)	395	62	2515296
363	26.0	8.0	5.9	chr3	13461708	13461928	(184833631)	+	MamGypLTR3a	LTR/Gypsy	652	877	(104)	2515297
33	5.1	0.0	0.0	chr3	13895541	13895581	(184399978)	+	(GGAGCCGAGC)n	Simple_repeat	1	41	(0)	2516117
13	8.1	3.6	3.5	chr3	14178454	14178481	(184117078)	+	(CCT)n	Simple_repeat	1	29	(0)	2516418
830	25.5	12.6	5.5	chr3	14216115	14216475	(184079084)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	196	2516482
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
731	19.3	4.0	0.0	chr3	24519048	24519192	(173776367)	+	MER5A	DNA/hAT-Charlie	1	151	(38)	2532018
359	25.4	5.0	0.9	chr3	24519329	24519443	(173776116)	+	LTR16A1	LTR/ERVL	4	123	(333)	2532019
830	22.9	9.9	0.4	chr3	24519463	24519690	(173775869)	+	LTR16A1	LTR/ERVL	204	455	(1)	2532019
16	19.2	7.4	0.0	chr3	25790038	25790045	(172505514)	+	(GCGCGT)n	Simple_repeat	1	57	(0)	2533813
16	19.7	0.0	4.4	chr3	25790046	25790090	(172505469)	+	(GCGT)n	Simple_repeat	1	45	(0)	2533814
13	12.5	0.0	0.0	chr3	32570224	32570249	(165725310)	+	(GGCGG)n	Simple_repeat	1	26	(0)	2544138
16	11.2	0.0	0.0	chr3	32570308	32570336	(165725223)	+	(GGGGC)n	Simple_repeat	1	29	(0)	2544139
280	26.8	7.6	0.0	chr3	38039699	38039795	(160255764)	C	L2a	LINE/L2	(27)	3399	3295	2552430
13	20.4	6.7	5.0	chr3	38136871	38136945	(160158614)	+	(GCGGCC)n	Simple_repeat	1	80	(0)	2552566
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
377	19.8	1.2	1.2	chr3	38627979	38628060	(159667499)	C	MER5A1	DNA/hAT-Charlie	(71)	95	14	2553309
15	21.4	1.9	3.8	chr3	42300039	42300090	(155995469)	+	(TCTGAC)n	Simple_repeat	1	53	(0)	2558861
733	26.6	8.4	2.9	chr3	42300298	42300435	(155995124)	+	LTR16E1	LTR/ERVL	243	398	(140)	2558862
1535	12.7	22.6	3.1	chr3	42300436	42300761	(155994798)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2558863
1441	7.8	0.0	0.0	chr3	44532776	44532955	(153762604)	C	AluSx	SINE/Alu	(8)	304	125	2562268
197	32.9	6.8	0.0	chr3	44532990	44533071	(153762488)	+	L2b	LINE/L2	3282	3369	(6)	2562265
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
3092	19.3	7.6	1.2	chr3	45684410	45685012	(152610547)	C	LTR9D	LTR/ERV1	(0)	645	1	2564281
489	21.8	4.7	2.1	chr3	46488743	46488887	(151806672)	+	LTR41B	LTR/ERVL	19	167	(591)	2565464
377	26.0	16.2	1.0	chr3	46489221	46489418	(151806141)	+	LTR41B	LTR/ERVL	444	677	(81)	2565464
13	22.5	2.0	3.9	chr3	46812591	46812640	(151482919)	+	G-rich	Low_complexity	1	51	(0)	2565967
915	12.7	0.0	0.0	chr3	47522050	47522167	(150773392)	C	AluJo	SINE/Alu	(194)	118	1	2567350
20	18.0	3.3	3.2	chr3	48187990	48188049	(150107510)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	2568895
221	32.2	10.6	2.8	chr3	48439822	48440003	(149855556)	+	L2	LINE/L2	2883	3080	(339)	2569308
255	34.1	4.7	0.0	chr3	48848203	48848325	(149447234)	C	L2b	LINE/L2	(212)	3163	3035	2570100
26	21.6	1.6	0.0	chr3	49093912	49093975	(149201584)	+	(CCG)n	Simple_repeat	1	65	(0)	2570661
33	5.2	0.0	0.0	chr3	49554659	49554698	(148740861)	+	(CGGCCC)n	Simple_repeat	1	40	(0)	2571618
27	6.1	0.0	0.0	chr3	49554786	49554820	(148740739)	+	(GGCCCC)n	Simple_repeat	1	35	(0)	2571619
12	15.8	0.0	3.3	chr3	49869297	49869326	(148426233)	+	(CCCCG)n	Simple_repeat	1	30	(0)	2572129
12	23.9	0.0	2.4	chr3	50292275	50292315	(148003244)	+	G-rich	Low_complexity	1	41	(0)	2572875
15	17.7	2.5	2.4	chr3	51391725	51391764	(146903795)	+	(CGC)n	Simple_repeat	1	41	(0)	2574237
24	24.2	3.6	2.4	chr3	51706982	51707105	(146588454)	+	G-rich	Low_complexity	1	125	(0)	2574851
2313	8.2	2.6	0.0	chr3	52239751	52240044	(146055515)	C	AluSp	SINE/Alu	(0)	313	12	2575622
15	23.3	3.5	6.7	chr3	52278686	52278771	(146016788)	+	G-rich	Low_complexity	1	89	(0)	2575687
199	28.1	1.5	1.5	chr3	52385519	52385583	(145909976)	+	MIR	SINE/MIR	73	137	(125)	2575834
338	31.2	8.6	1.8	chr3	53255289	53255451	(145040108)	+	MIR	SINE/MIR	13	187	(75)	2577296
48	2.1	0.0	0.0	chr3	54188229	54188276	(144107283)	+	(AAAC)n	Simple_repeat	1	48	(0)	2578705
15531	12.6	2.5	3.1	chr3	56494950	56495112	(141800447)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	2249	2582241
18	13.3	0.0	0.0	chr3	58306041	58306073	(139989486)	+	(TGAA)n	Simple_repeat	1	33	(0)	2585763
16	5.3	0.0	0.0	chr3	61560968	61560987	(136734572)	+	(A)n	Simple_repeat	1	20	(0)	2590826
14	29.8	2.4	4.6	chr3	61561456	61561540	(136734019)	+	(CGCC)n	Simple_repeat	1	87	(0)	2590827
21400	12.7	4.5	1.6	chr3	63011525	63016275	(135279284)	C	L1PA8A	LINE/L1	(1450)	5011	19	2593290
1451	24.7	5.7	2.4	chr3	65872579	65873071	(132422488)	+	L1ME3	LINE/L1	5653	6162	(0)	2598181
20	11.1	2.4	2.4	chr3	71754280	71754320	(126541239)	+	(GGC)n	Simple_repeat	1	42	(0)	2607757
11	21.7	6.0	1.9	chr3	71754493	71754542	(126541017)	+	(GGCGCT)n	Simple_repeat	1	53	(0)	2607758
23	22.5	4.5	3.3	chr3	88058915	88059002	(110236557)	+	(CCG)n	Simple_repeat	1	92	(0)	2630311
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
34	22.2	1.6	5.7	chr3	100709847	100709968	(97585591)	+	GA-rich	Low_complexity	1	124	(0)	2642107
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
1812	14.5	2.3	1.0	chr3	109325117	109325413	(88970146)	C	AluJb	SINE/Alu	(11)	301	1	2653674
394	22.8	13.7	0.7	chr3	109325506	109325651	(88969908)	C	L1MC4	LINE/L1	(537)	7505	7338	2653675
15	24.9	1.9	1.8	chr3	112086265	112086318	(86209241)	+	(CCGCT)n	Simple_repeat	1	55	(0)	2657367
16	11.7	8.3	1.9	chr3	115325850	115325897	(82969662)	+	A-rich	Low_complexity	1	52	(0)	2661947
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
24	23.3	5.2	5.7	chr3	119702855	119702988	(78592571)	+	(TCC)n	Simple_repeat	1	141	(0)	2668038
19	23.1	4.0	2.6	chr3	120285175	120285248	(78010311)	+	(GCGCCGG)n	Simple_repeat	1	77	(0)	2668922
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
337	36.1	8.7	3.5	chr3	120503992	120504252	(77791307)	C	MLT1N2	LTR/ERVL-MaLR	(266)	296	21	2669257
1264	24.1	13.8	1.8	chr3	120504320	120504763	(77790796)	+	LTR33	LTR/ERVL	1	506	(9)	2669258
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
432	25.3	13.8	3.0	chr3	123066692	123066858	(75228701)	+	MIRb	SINE/MIR	67	254	(14)	2673093
13	21.8	2.7	0.0	chr3	123449007	123449043	(74846516)	+	(CGG)n	Simple_repeat	1	38	(0)	2673715
420	27.6	8.2	0.0	chr3	127158725	127158927	(71136632)	C	L2b	LINE/L2	(196)	3179	2959	2679605
266	29.0	5.2	3.3	chr3	127159045	127159194	(71136365)	+	MIR	SINE/MIR	23	175	(87)	2679606
571	15.5	8.5	0.0	chr3	127162686	127162814	(71132745)	+	MER33	DNA/hAT-Charlie	46	186	(138)	2679613
259	13.6	1.5	1.5	chr3	127162792	127162858	(71132701)	+	MER33	DNA/hAT-Charlie	208	274	(50)	2679614
322	27.5	5.7	6.9	chr3	127628620	127628779	(70666780)	C	MIR3	SINE/MIR	(45)	163	6	2680396
452	11.3	11.0	1.0	chr3	127914920	127915017	(70380542)	C	MER53	DNA/hAT	(84)	109	1	2680908
491	33.3	3.5	1.5	chr3	128425990	128426184	(69869375)	C	MIRb	SINE/MIR	(15)	253	55	2681708
415	31.0	9.1	1.1	chr3	128426195	128426401	(69869158)	+	MIRb	SINE/MIR	21	233	(35)	2681709
194	23.9	4.2	0.0	chr3	128993480	128993525	(69302034)	+	L2b	LINE/L2	3328	3375	(0)	2682835
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
23	26.9	1.2	2.5	chr3	132034898	132034977	(66260582)	+	GA-rich	Low_complexity	1	81	(0)	2687845
12	11.6	3.3	3.2	chr3	134250381	134250410	(64045149)	+	(CCGGC)n	Simple_repeat	1	31	(0)	2691135
29	26.3	2.1	1.1	chr3	134250496	134250588	(64044971)	+	(CGG)n	Simple_repeat	1	95	(0)	2691136
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
14	20.0	0.0	6.5	chr3	138945502	138945547	(59350012)	+	(GGC)n	Simple_repeat	1	46	(0)	2698569
39	23.6	4.6	4.4	chr3	138945713	138945726	(59349833)	+	(GGC)n	Simple_repeat	1	18	(163)	2698570
13	15.8	2.7	2.6	chr3	138945727	138945763	(59349796)	+	G-rich	Low_complexity	1	38	(0)	2698571
39	23.6	4.6	4.4	chr3	138945764	138945885	(59349674)	+	(GGC)n	Simple_repeat	19	181	(0)	2698570
14	22.0	2.4	0.0	chr3	139539431	139539472	(58756087)	+	(GCGCGCA)n	Simple_repeat	1	43	(0)	2699495
581	27.9	7.3	6.6	chr3	140941197	140941468	(57354091)	C	L1ME3G	LINE/L1	(291)	633	360	2701539
1905	15.5	0.6	7.2	chr3	149197600	149197961	(49097598)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	2713202
4973	21.1	8.9	3.9	chr3	149197962	149198287	(49097272)	+	L1MC5	LINE/L1	8745	9117	(187)	2713199
30	24.7	1.2	0.0	chr3	150408250	150408330	(47887229)	+	(CGG)n	Simple_repeat	1	82	(0)	2715186
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
223	24.8	4.7	10.6	chr3	156554653	156554765	(41740794)	C	MER5A	DNA/hAT-Charlie	(43)	146	41	2724195
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
443	29.6	3.6	1.2	chr3	157089356	157089516	(41206043)	C	MIR3	SINE/MIR	(5)	203	39	2724955
15	26.4	0.0	0.0	chr3	158098206	158098250	(40197309)	+	G-rich	Low_complexity	1	45	(0)	2726357
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
12	18.0	5.0	2.4	chr3	179323212	179323251	(18972308)	+	(CCG)n	Simple_repeat	1	42	(0)	2755996
15	14.4	0.0	0.0	chr3	181713426	181713449	(16582110)	+	(A)n	Simple_repeat	1	24	(0)	2759752
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
18	16.7	7.9	5.2	chr3	185498746	185498834	(12796725)	+	(GATCCCG)n	Simple_repeat	1	96	(0)	2766483
16	6.8	6.5	0.0	chr3	187139537	187139578	(11155981)	+	(GGCCCC)n	Simple_repeat	1	44	(0)	2769652
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
610	28.2	13.2	1.8	chr3	194333041	194333440	(3962119)	C	MER20B	DNA/hAT-Charlie	(10)	773	321	2780947
4095	15.4	3.6	1.3	chr3	194928677	194929381	(3366178)	+	MER50	LTR/ERV1	1	722	(12)	2782087
332	15.5	12.9	5.5	chr3	194985152	194985315	(3310244)	+	LTR50	LTR/ERVL	61	238	(557)	2782182
2299	7.5	1.7	0.0	chr3	195747584	195747878	(2547681)	+	AluSz	SINE/Alu	1	300	(12)	2783589
26	3.2	0.0	2.9	chr3	195747963	195747996	(2547563)	+	(CCCCG)n	Simple_repeat	1	34	(0)	2783590
14	7.7	3.3	3.2	chr3	195748011	195748040	(2547519)	+	(GCCCC)n	Simple_repeat	1	31	(0)	2783591
15	15.2	0.0	9.4	chr3	196867773	196867825	(1427734)	+	G-rich	Low_complexity	1	53	(0)	2785946
16	0.0	0.0	0.0	chr3	197555249	197555268	(740291)	+	(GGA)n	Simple_repeat	1	20	(0)	2787121
284	31.6	2.9	1.4	chr3	197555315	197555452	(740107)	+	MIR3	SINE/MIR	23	162	(46)	2787122
7694	6.5	1.0	0.5	chr3	198050672	198051673	(243886)	+	LTR13	LTR/ERVK	1	1007	(0)	2788058
14	21.8	5.3	5.0	chr4	932006	932081	(189282474)	+	(CCGCAG)n	Simple_repeat	1	80	(0)	2789688
16	14.9	2.7	0.0	chr4	1171212	1171255	(189043300)	+	(GCCCCCG)n	Simple_repeat	1	45	(0)	2789955
24	25.1	4.9	1.9	chr4	2792973	2793074	(187421481)	+	G-rich	Low_complexity	1	107	(0)	2792250
13022	9.1	0.6	1.6	chr4	2921428	2923602	(187290953)	C	L1PA7	LINE/L1	(4310)	2189	1	2792449
193	27.4	5.8	3.4	chr4	3791967	3792083	(186422472)	C	L2	LINE/L2	(870)	2549	2430	2793620
213	31.8	0.9	8.6	chr4	5875552	5875668	(184338887)	C	L2c	LINE/L2	(246)	3141	3034	2797342
2326	7.5	0.0	0.3	chr4	5875872	5876166	(184338389)	+	AluY	SINE/Alu	2	295	(16)	2797343
830	27.6	0.4	6.9	chr4	6362797	6363041	(183851514)	+	MIR	SINE/MIR	2	230	(32)	2798226
463	24.9	4.2	8.1	chr4	6363199	6363296	(183851259)	C	MER63A	DNA/hAT-Blackjack	(0)	210	119	2798227
2496	8.0	0.0	0.3	chr4	6363297	6363608	(183850947)	+	AluY	SINE/Alu	1	311	(0)	2798228
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
17	20.4	8.5	2.2	chr4	6782459	6782540	(183432015)	+	(CCCGCAG)n	Simple_repeat	1	89	(0)	2799089
270	26.0	5.0	0.0	chr4	7044016	7044111	(183170444)	C	MIRb	SINE/MIR	(133)	135	35	2799510
12	18.1	0.0	3.0	chr4	14196473	14196505	(176018050)	+	(AATTT)n	Simple_repeat	1	33	(0)	2810573
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
205	29.2	0.9	7.4	chr4	18022764	18022885	(172191670)	+	L2a	LINE/L2	3309	3422	(4)	2817245
58	1.9	0.0	0.0	chr4	24470272	24470325	(165744230)	+	(AC)n	Simple_repeat	1	54	(0)	2827178
21	26.6	1.4	1.4	chr4	37453961	37454029	(152760526)	+	(CCG)n	Simple_repeat	1	70	(0)	2846127
21	23.0	1.4	4.1	chr4	37686406	37686477	(152528078)	+	(CCCCG)n	Simple_repeat	1	73	(0)	2846487
11	22.8	0.0	7.5	chr4	40630514	40630566	(149583989)	+	G-rich	Low_complexity	1	53	(0)	2852465
12	22.4	0.0	2.6	chr4	52751641	52751678	(137462877)	+	G-rich	Low_complexity	1	38	(0)	2866702
49	25.2	3.5	0.0	chr4	61199939	61200082	(129014473)	+	GA-rich	Low_complexity	1	149	(0)	2879115
23	28.9	0.0	4.3	chr4	61200502	61200593	(129013962)	+	(CGC)n	Simple_repeat	1	92	(0)	2879116
15	20.0	3.6	3.5	chr4	65669685	65669739	(124544816)	+	(CGCCCCGG)n	Simple_repeat	1	57	(0)	2884661
16	14.5	5.3	0.0	chr4	73998498	73998535	(116216020)	+	(CAG)n	Simple_repeat	1	40	(0)	2895598
13	19.6	2.2	4.3	chr4	74158303	74158347	(116056208)	+	(GGTGGC)n	Simple_repeat	1	46	(0)	2895789
185	22.5	0.0	0.0	chr4	76148830	76148869	(114065686)	C	L2c	LINE/L2	(245)	3142	3103	2898786
13	13.2	6.1	0.0	chr4	82430020	82430052	(107784503)	+	(GCGC)n	Simple_repeat	1	35	(0)	2907601
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
14	16.4	2.9	0.0	chr4	84965922	84965955	(105248600)	+	(CCGACC)n	Simple_repeat	1	35	(0)	2911909
26769	4.3	0.5	0.2	chr4	85661519	85667643	(104546912)	C	L1PA3	LINE/L1	(0)	6155	9	2912821
27041	3.7	0.2	0.1	chr4	88919560	88925734	(101288821)	+	L1PA3	LINE/L1	3	6155	(0)	2917858
7256	11.8	0.3	0.0	chr4	92253176	92254186	(97960369)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	567	2922045
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
14	11.0	0.0	5.9	chr4	92306021	92306054	(97908501)	+	(ACACAT)n	Simple_repeat	1	34	(0)	2922097
3275	22.4	6.4	6.3	chr4	92520063	92520954	(97693601)	C	HERVL-int	LTR/ERVL	(0)	5654	4762	2922382
14	18.2	0.0	4.9	chr4	108650471	108650511	(81564044)	+	(TTTA)n	Simple_repeat	1	41	(0)	2943807
15	12.2	0.0	0.0	chr4	109302706	109302732	(80911823)	+	(GTGA)n	Simple_repeat	1	27	(0)	2944734
13	25.1	6.6	0.0	chr4	109302732	109302792	(80911763)	+	(GCGCCCG)n	Simple_repeat	1	65	(0)	2944735
13	19.3	0.0	10.2	chr4	109433779	109433789	(80780766)	+	(TCCC)n	Simple_repeat	1	58	(0)	2944950
1841	10.3	9.7	0.0	chr4	112645996	112646266	(77568289)	C	AluSx3	SINE/Alu	(8)	303	4	2949529
238	31.6	0.0	2.6	chr4	118669435	118669512	(71545043)	+	MamRep605	LTR?	108	183	(666)	2957330
803	34.5	2.9	2.7	chr4	118669565	118669972	(71544583)	+	MamRep605	LTR?	341	749	(100)	2957330
3478	4.9	0.0	1.1	chr4	119993664	119994116	(70220439)	+	LTR7	LTR/ERV1	1	448	(2)	2959241
19536	9.4	5.5	7.2	chr4	119994119	119997469	(70217086)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	2959241
14	13.1	11.5	1.7	chr4	121823742	121823793	(68390762)	+	(CAGCC)n	Simple_repeat	1	58	(0)	2961635
1699	20.2	21.2	4.9	chr4	128678138	128678535	(61536020)	+	LTR48	LTR/ERV1	84	624	(163)	2971100
2391	11.9	0.0	0.0	chr4	128678536	128678830	(61535725)	+	AluSx	SINE/Alu	1	295	(17)	2971102
1699	20.2	21.2	4.9	chr4	128678831	128679003	(61535552)	+	LTR48	LTR/ERV1	625	786	(1)	2971100
6617	11.3	1.9	1.5	chr4	132227303	132228305	(57986250)	C	LTR13	LTR/ERVK	(0)	1007	1	2975612
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
13	15.5	11.9	1.5	chr4	140427653	140427711	(49786844)	+	(GCGCGT)n	Simple_repeat	1	66	(0)	2986212
38	0.0	0.0	0.0	chr4	146639306	146639340	(43575215)	+	(GGC)n	Simple_repeat	1	35	(0)	2994601
17	19.2	0.0	0.0	chr4	146639348	146639383	(43575172)	+	(AGC)n	Simple_repeat	1	36	(0)	2994602
410	28.6	6.0	2.8	chr4	147684581	147684758	(42529797)	C	MIRb	SINE/MIR	(52)	216	28	2996024
13	4.3	0.0	7.1	chr4	147732031	147732058	(42482497)	+	(GGGGC)n	Simple_repeat	1	28	(0)	2996130
312	23.1	0.7	14.1	chr4	152850581	152850736	(37363819)	+	MER5A1	DNA/hAT-Charlie	26	160	(6)	3003668
22	24.6	0.0	0.0	chr4	152935823	152935871	(37278684)	+	(GT)n	Simple_repeat	1	49	(0)	3003770
13	11.1	0.0	6.1	chr4	152936129	152936161	(37278394)	+	(GGTGGC)n	Simple_repeat	1	33	(0)	3003771
11	27.0	3.6	1.8	chr4	153344683	153344737	(36869818)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3004474
19	23.2	0.0	0.0	chr4	153788050	153788090	(36426465)	+	(T)n	Simple_repeat	1	41	(0)	3005187
13	13.7	4.3	6.2	chr4	158768828	158768873	(31445682)	+	(CCGC)n	Simple_repeat	1	48	(0)	3011882
24	18.2	0.9	2.6	chr4	158768897	158768961	(31445594)	+	(GCC)n	Simple_repeat	1	63	(0)	3011883
23	26.8	3.9	2.8	chr4	158769107	158769209	(31445346)	+	(GCC)n	Simple_repeat	1	107	(0)	3011884
14	23.1	2.1	2.0	chr4	169824035	169824082	(20390473)	+	(CCTGG)n	Simple_repeat	1	49	(0)	3026899
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
1537	29.5	5.6	2.2	chr4	179097245	179097881	(11116674)	+	L1MCc	LINE/L1	874	1533	(4890)	3039059
17	4.9	0.0	0.0	chr4	182807674	182807694	(7406861)	+	(TC)n	Simple_repeat	1	21	(0)	3043913
56	1.9	0.0	0.0	chr4	182807697	182807748	(7406807)	+	(CA)n	Simple_repeat	1	52	(0)	3043914
14	9.3	0.0	0.0	chr4	184734032	184734054	(5480501)	+	(GCC)n	Simple_repeat	1	23	(0)	3047089
26	0.0	0.0	0.0	chr4	186144723	186144747	(4069808)	+	(CGGGGC)n	Simple_repeat	1	25	(0)	3049273
2570	5.5	0.0	0.7	chr4	189096450	189096757	(1117798)	C	AluY	SINE/Alu	(5)	306	1	3053473
11	14.4	7.5	2.3	chr5	344074	344113	(181194146)	+	G-rich	Low_complexity	1	43	(0)	3055345
17	24.0	3.0	2.9	chr5	892898	892964	(180645295)	+	(GGCGGC)n	Simple_repeat	1	69	(0)	3055780
27	14.6	7.4	2.3	chr5	1246817	1246897	(180291362)	+	(TCCCTCC)n	Simple_repeat	1	87	(0)	3056077
2108	28.4	5.9	4.9	chr5	10110854	10111772	(171426487)	C	L1MC4	LINE/L1	(1)	8041	7113	3066336
288	37.5	1.4	0.0	chr5	10111866	10112001	(171426258)	+	HERVL-int	LTR/ERVL	2890	3027	(2627)	3066337
11	7.5	6.7	3.1	chr5	13554006	13554035	(167984224)	+	(GCCACA)n	Simple_repeat	1	32	(0)	3070965
16	18.1	4.5	0.0	chr5	13554061	13554104	(167984155)	+	(CAGCGC)n	Simple_repeat	1	46	(0)	3070966
4841	15.5	2.2	5.4	chr5	14628720	14629106	(166909153)	C	L1MB8	LINE/L1	(6)	6172	5788	3072441
23	20.4	4.3	1.4	chr5	16179074	16179142	(165359117)	+	(GCT)n	Simple_repeat	1	72	(0)	3074628
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
1914	8.9	9.1	17.8	chr5	33297739	33298188	(148240071)	C	MER48	LTR/ERV1	(0)	407	1	3098120
4795	12.9	4.2	1.7	chr5	33298189	33298338	(148239921)	+	LTR39	LTR/ERV1	630	783	(0)	3098119
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
11	24.1	2.6	0.0	chr5	43603102	43603140	(137935119)	+	G-rich	Low_complexity	1	40	(0)	3113334
20	15.7	2.3	0.0	chr5	44809324	44809366	(136728893)	+	(CCCGAG)n	Simple_repeat	1	44	(0)	3114717
17	18.6	5.3	6.2	chr5	54517730	54517805	(127020454)	+	(CGG)n	Simple_repeat	1	80	(0)	3121856
13	26.3	0.0	5.5	chr5	54518246	54518300	(127019959)	+	(GCC)n	Simple_repeat	1	55	(0)	3121857
27	18.4	3.9	2.5	chr5	65035559	65035636	(116502623)	+	(GGAGGCG)n	Simple_repeat	1	81	(0)	3137271
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
13	15.4	5.6	0.0	chr5	68215681	68215716	(113322543)	+	G-rich	Low_complexity	1	38	(0)	3141939
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
2855	16.8	9.4	5.0	chr5	71586451	71587046	(109951213)	C	MER51A	LTR/ERV1	(9)	625	1	3147717
20	9.8	2.0	6.0	chr5	73498823	73498871	(108039388)	+	(GGCCA)n	Simple_repeat	1	50	(0)	3150587
11	24.6	0.0	2.5	chr5	76818919	76818958	(104719301)	+	(GCGGAGG)n	Simple_repeat	1	40	(0)	3155688
14	20.1	2.0	4.0	chr5	76818945	76818993	(104719266)	+	G-rich	Low_complexity	1	50	(0)	3155689
11	12.8	8.7	4.0	chr5	79991100	79991145	(101547114)	+	(CCTGCGC)n	Simple_repeat	1	50	(0)	3160666
14	17.4	6.7	0.0	chr5	80097233	80097277	(101440982)	+	(CTCTTCA)n	Simple_repeat	1	48	(0)	3160846
281	29.3	6.6	2.0	chr5	80097310	80097410	(101440849)	C	MER91A	DNA/hAT-Tip100	(73)	123	18	3160847
558	25.8	20.6	0.8	chr5	80097521	80097910	(101440349)	+	LTR16C	LTR/ERVL	2	476	(13)	3160848
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
12	8.6	0.0	6.9	chr5	81852164	81852192	(99686067)	+	(AACA)n	Simple_repeat	1	29	(0)	3163718
32	0.0	0.0	0.0	chr5	81852213	81852242	(99686017)	+	(T)n	Simple_repeat	1	30	(0)	3163719
2322	6.4	4.2	1.0	chr5	86618707	86619003	(94919256)	+	AluSx	SINE/Alu	1	307	(5)	3170031
19	26.6	0.0	0.0	chr5	87268723	87268776	(94269483)	+	(CTG)n	Simple_repeat	1	54	(0)	3170897
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
87	0.0	0.0	0.0	chr5	96808188	96808261	(84729998)	+	(GT)n	Simple_repeat	1	74	(0)	3183133
7061	11.6	19.9	2.1	chr5	97084498	97085786	(84452473)	C	LTR12C	LTR/ERV1	(0)	1579	4	3183564
2003	11.6	5.4	1.4	chr5	97085817	97086173	(84452086)	C	THE1C	LTR/ERVL-MaLR	(0)	375	4	3183565
12	22.9	1.7	6.8	chr5	107670654	107670711	(73867548)	+	G-rich	Low_complexity	1	59	(0)	3196630
15	16.9	0.0	0.0	chr5	108381811	108381837	(73156422)	+	(CA)n	Simple_repeat	1	27	(0)	3197553
12	9.8	0.0	0.0	chr5	108381945	108381966	(73156293)	+	(GCGA)n	Simple_repeat	1	22	(0)	3197554
9665	12.3	1.6	7.9	chr5	108684501	108686389	(72851870)	C	L1P2	LINE/L1	(4409)	1775	8	3197971
20	30.0	3.5	0.0	chr5	109689790	109689874	(71848385)	+	(GCG)n	Simple_repeat	1	88	(0)	3199330
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
11	16.7	5.9	0.0	chr5	111512568	111512601	(70025658)	+	(CCCAGCC)n	Simple_repeat	1	36	(0)	3201527
15	19.4	0.0	4.4	chr5	112707984	112708028	(68830231)	+	(CTCTCCC)n	Simple_repeat	1	45	(0)	3203153
15	4.7	0.0	0.0	chr5	115180625	115180646	(66357613)	+	(AAAT)n	Simple_repeat	1	22	(0)	3206403
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
16	11.1	0.0	0.0	chr5	116085200	116085228	(65453031)	+	(GGTGG)n	Simple_repeat	1	29	(0)	3207708
563	28.1	9.9	2.6	chr5	116085485	116085794	(65452465)	+	MER113	DNA/hAT-Charlie	152	486	(35)	3207709
25	23.3	0.0	4.0	chr5	122774960	122775035	(58763224)	+	G-rich	Low_complexity	1	76	(0)	3216418
16	18.2	3.2	6.2	chr5	122845518	122845580	(58692679)	+	G-rich	Low_complexity	1	65	(0)	3216525
22113	5.3	0.1	0.1	chr5	127264922	127268512	(54269747)	C	L1PA5	LINE/L1	(4)	6150	2557	3222620
14005	7.0	0.3	0.0	chr5	127268513	127270668	(54267591)	+	L1PA5	LINE/L1	411	2573	(3573)	3222620
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
18	18.5	0.0	2.2	chr5	131164481	131164525	(50373734)	+	G-rich	Low_complexity	1	45	(0)	3227448
14	27.8	1.4	4.2	chr5	131264260	131264329	(50273930)	+	G-rich	Low_complexity	1	71	(0)	3227656
12	17.2	4.9	2.3	chr5	134226811	134226851	(47311408)	+	(GCCTCGC)n	Simple_repeat	1	43	(0)	3232122
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
2689	2.9	0.0	1.3	chr5	134903962	134904268	(46633991)	+	AluY	SINE/Alu	1	303	(8)	3233619
20	20.7	0.0	0.0	chr5	134904310	134904348	(46633911)	+	A-rich	Low_complexity	1	39	(0)	3233620
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
1694	17.2	0.3	0.3	chr5	138662418	138662701	(42875558)	+	AluJb	SINE/Alu	24	307	(5)	3239309
364	26.2	12.2	1.6	chr5	138662721	138662844	(42875415)	+	L2a	LINE/L2	3288	3426	(0)	3239310
283	32.7	12.0	1.0	chr5	139439598	139439804	(42098455)	+	MIRc	SINE/MIR	2	234	(34)	3240769
21	8.1	5.1	0.0	chr5	139561727	139561765	(41976494)	+	(CCCCGT)n	Simple_repeat	1	41	(0)	3241048
18	25.5	1.6	1.6	chr5	139561766	139561788	(41976471)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	3241049
12	10.8	6.7	0.0	chr5	139698867	139698896	(41839363)	+	(ATTTGC)n	Simple_repeat	1	32	(0)	3241326
409	31.2	11.0	3.6	chr5	139699198	139699390	(41838869)	C	MIRb	SINE/MIR	(31)	237	29	3241327
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
21	24.2	0.0	8.7	chr5	140639334	140639436	(40898823)	+	(GCCCC)n	Simple_repeat	1	103	(0)	3242980
426	24.8	7.5	10.7	chr5	146447994	146448274	(35089985)	C	MIRb	SINE/MIR	(0)	268	18	3252611
16	18.4	7.4	4.6	chr5	150357906	150357986	(31180273)	+	(GCGGCCC)n	Simple_repeat	1	87	(0)	3259764
192	20.8	7.0	1.9	chr5	150358028	150358081	(31180178)	+	MIR3	SINE/MIR	103	159	(49)	3259765
12	24.5	4.5	0.0	chr5	151758558	151758601	(29779658)	+	(GGC)n	Simple_repeat	1	46	(0)	3262583
12	16.3	2.8	2.7	chr5	151772241	151772276	(29765983)	+	(GCGCGT)n	Simple_repeat	1	37	(0)	3262615
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
196	27.8	5.3	4.0	chr5	152246793	152246867	(29291392)	C	MIR3	SINE/MIR	(78)	130	55	3263408
442	33.2	5.5	1.2	chr5	154218905	154219148	(27319111)	+	L2b	LINE/L2	2727	2981	(438)	3266684
348	34.4	2.8	9.4	chr5	154219222	154219529	(27318730)	+	L2b	LINE/L2	3088	3374	(1)	3266684
1961	11.3	6.1	0.7	chr5	154691799	154692091	(26846168)	C	AluSx	SINE/Alu	(2)	310	1	3267797
18	0.0	0.0	0.0	chr5	168528570	168528589	(13009670)	+	(TC)n	Simple_repeat	1	20	(0)	3290249
41	19.6	4.0	5.7	chr5	168528789	168528940	(13009319)	+	(TTCTT)n	Simple_repeat	1	158	(0)	3290250
84	24.0	1.6	2.0	chr5	168529512	168529754	(13008505)	+	(CGGCGG)n	Simple_repeat	1	247	(0)	3290252
258	28.2	9.7	7.1	chr5	170394279	170394419	(11143840)	+	L2b	LINE/L2	3225	3369	(57)	3293517
13	8.1	0.0	6.7	chr5	171521036	171521065	(10017194)	+	(GCAG)n	Simple_repeat	1	30	(0)	3295485
19	18.9	0.0	0.0	chr5	172006555	172006596	(9531663)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	3296455
16	15.8	4.5	2.2	chr5	172683572	172683615	(8854644)	+	(GCC)n	Simple_repeat	1	46	(0)	3297973
13	17.2	3.9	5.7	chr5	172983718	172983768	(8554491)	+	G-rich	Low_complexity	1	53	(0)	3298674
16	32.7	0.0	1.4	chr5	173573442	173573511	(7964748)	+	(ACAATA)n	Simple_repeat	1	70	(0)	3299856
12	15.7	2.6	5.0	chr5	176388390	176388428	(5149831)	+	(CCCGGCC)n	Simple_repeat	1	40	(0)	3305144
16	17.7	0.0	2.5	chr5	176596937	176596976	(4941283)	+	(GCCGGC)n	Simple_repeat	1	40	(0)	3305626
70	0.0	0.0	0.0	chr5	176611363	176611422	(4926837)	+	(AT)n	Simple_repeat	1	60	(0)	3305655
329	29.7	9.2	1.7	chr5	176611606	176611725	(4926534)	C	MIRb	SINE/MIR	(29)	239	110	3305656
13	4.8	12.5	3.7	chr5	176630473	176630494	(4907765)	+	(CTCGCGCAG)n	Simple_repeat	1	25	(0)	3305697
27	0.0	0.0	0.0	chr5	176630495	176630520	(4907739)	+	(GCTCCG)n	Simple_repeat	1	26	(0)	3305698
13	4.8	12.5	3.7	chr5	176630521	176630545	(4907714)	+	(CTCGCGCAG)n	Simple_repeat	8	33	(0)	3305699
450	29.1	3.2	8.5	chr5	176630697	176630861	(4907398)	+	MIRb	SINE/MIR	2	157	(111)	3305700
20	0.0	3.7	0.0	chr5	177133041	177133067	(4405192)	+	(GTG)n	Simple_repeat	1	28	(0)	3306739
16	15.6	0.0	8.0	chr5	177133068	177133090	(4405169)	+	G-rich	Low_complexity	1	50	(0)	3306740
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
15	13.4	7.0	2.2	chr5	177592155	177592197	(3946062)	+	(GCG)n	Simple_repeat	1	46	(0)	3307701
16	14.2	5.1	0.0	chr5	178113402	178113440	(3424819)	+	G-rich	Low_complexity	1	41	(0)	3308587
208	31.0	14.9	3.2	chr5	178224148	178224424	(3313835)	+	L2a	LINE/L2	3053	3418	(8)	3308819
253	30.5	3.5	0.0	chr5	178556059	178556140	(2982119)	+	L1ME4b	LINE/L1	451	535	(357)	3309394
5052	15.4	2.7	0.4	chr5	179059219	179060061	(2478198)	+	L1MA4A	LINE/L1	5436	6298	(5)	3310303
12	16.5	0.0	0.0	chr5	179795688	179795714	(1742545)	+	(GGCGG)n	Simple_repeat	1	27	(0)	3311603
12	17.5	3.1	0.0	chr5	180649090	180649121	(889138)	+	(CGGCG)n	Simple_repeat	1	33	(0)	3313019
16	16.8	1.9	5.7	chr5	180649257	180649308	(888951)	+	(GGCCC)n	Simple_repeat	1	53	(0)	3313020
872	9.1	0.0	0.0	chr5	180831998	180832107	(706152)	+	AluSq2	SINE/Alu	192	301	(12)	3313313
709	18.1	0.7	5.5	chr5	180832115	180832157	(706102)	+	MLT1D	LTR/ERVL-MaLR	367	409	(96)	3313309
351	28.7	14.7	5.7	chr5	181150984	181151382	(386877)	C	L2a	LINE/L2	(148)	3278	2809	3313730
206	31.5	3.3	3.3	chr5	181151515	181151606	(386653)	C	L2c	LINE/L2	(217)	3170	3079	3313732
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
1889	10.1	2.7	3.0	chr5	181242563	181242858	(295401)	C	AluSx1	SINE/Alu	(17)	295	1	3313917
2053	19.6	3.8	1.5	chr6	147987	149049	(170656930)	C	TAR1	Satellite/telo	(237)	1087	1	3314432
13	14.4	5.0	2.4	chr6	692814	692853	(170113126)	+	G-rich	Low_complexity	1	42	(0)	3315113
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
1519	21.2	2.2	4.6	chr6	1524332	1524697	(169281282)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	1	3316257
14	19.0	5.0	4.8	chr6	2634350	2634409	(168171570)	+	(CCCGCAG)n	Simple_repeat	1	63	(0)	3317715
11	13.2	5.7	2.7	chr6	3227708	3227742	(167578237)	+	(CAGCCCC)n	Simple_repeat	1	37	(0)	3318604
256	27.4	6.7	0.0	chr6	3749357	3749440	(167056539)	C	CR1-3_Croc	LINE/CR1	(832)	2773	2684	3319352
334	31.7	1.9	0.0	chr6	5030818	5030921	(165775058)	+	MER3	DNA/hAT-Charlie	1	106	(103)	3321390
14	3.9	0.0	9.4	chr6	5260985	5261016	(165544963)	+	(GCCCC)n	Simple_repeat	1	32	(0)	3321767
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
12	15.8	0.0	3.3	chr6	13769922	13769951	(157036028)	+	(CCCG)n	Simple_repeat	1	30	(0)	3334869
1187	16.3	1.4	5.3	chr6	13770039	13770265	(157035714)	C	AluJo	SINE/Alu	(8)	304	87	3334870
187	29.0	1.6	1.6	chr6	14784540	14784602	(156021377)	C	MIR3	SINE/MIR	(63)	145	83	3336546
280	29.1	1.9	1.9	chr6	15078228	15078332	(155727647)	+	MLT1K	LTR/ERVL-MaLR	468	572	(23)	3337170
2070	13.3	0.0	0.0	chr6	15078338	15078631	(155727348)	C	AluJb	SINE/Alu	(5)	307	14	3337171
18	12.8	0.0	0.0	chr6	18122654	18122687	(152683292)	+	(ACGGTC)n	Simple_repeat	1	34	(0)	3342482
13	23.9	0.0	2.4	chr6	20868495	20868535	(149937444)	+	(GCA)n	Simple_repeat	1	41	(0)	3346755
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
258	32.8	17.9	1.1	chr6	24587901	24588085	(146217894)	+	L2c	LINE/L2	2809	3031	(388)	3352194
290	20.0	0.0	0.0	chr6	24588118	24588177	(146217802)	+	MIRb	SINE/MIR	194	253	(15)	3352197
630	26.6	8.6	5.1	chr6	24588201	24588513	(146217466)	+	L2c	LINE/L2	3044	3387	(0)	3352194
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
14	13.2	2.9	2.8	chr6	26156401	26156435	(144649544)	+	(CTGCCC)n	Simple_repeat	1	36	(0)	3354734
12	19.7	2.3	4.4	chr6	26501645	26501688	(144304291)	+	(CGCCGAG)n	Simple_repeat	1	45	(0)	3355355
678	4.8	0.0	0.0	chr6	27230555	27230637	(143575342)	C	tRNA-Leu-TTA	tRNA	(3)	83	1	3356540
21	18.4	0.0	2.0	chr6	27251567	27251617	(143554362)	+	G-rich	Low_complexity	1	51	(0)	3356580
720	19.3	9.3	0.0	chr6	27830771	27830936	(142975043)	+	AluJr	SINE/Alu	1	183	(129)	3357669
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
12	19.9	2.3	4.4	chr6	28267225	28267268	(142538711)	+	G-rich	Low_complexity	1	45	(0)	3358358
13	22.5	2.0	3.9	chr6	30345413	30345462	(140460517)	+	G-rich	Low_complexity	1	51	(0)	3361461
16	20.9	0.0	0.0	chr6	30345612	30345644	(140460335)	+	G-rich	Low_complexity	1	33	(0)	3361462
19	14.4	0.0	0.0	chr6	30571118	30571148	(140234831)	+	(A)n	Simple_repeat	1	31	(0)	3361824
13	10.7	9.5	2.2	chr6	30647306	30647347	(140158632)	+	GA-rich	Low_complexity	1	46	(0)	3361953
282	21.4	6.7	4.5	chr6	30726051	30726138	(140079841)	+	MER5A	DNA/hAT-Charlie	18	107	(82)	3362089
1172	13.6	4.4	15.2	chr6	30726257	30726552	(140079427)	+	AluJb	SINE/Alu	3	275	(37)	3362090
13	27.2	2.0	0.0	chr6	30838334	30838382	(139967597)	+	A-rich	Low_complexity	1	50	(0)	3362349
2297	10.6	0.0	0.3	chr6	30838594	30838894	(139967085)	C	AluSc	SINE/Alu	(9)	300	1	3362350
4205	12.2	4.2	0.2	chr6	30845021	30845634	(139960345)	C	LTR9B	LTR/ERV1	(0)	644	5	3362367
2066	7.9	7.4	0.4	chr6	31542686	31542962	(139263017)	C	AluSx1	SINE/Alu	(14)	298	1	3363472
47	0.0	0.0	0.0	chr6	31652321	31652360	(139153619)	+	(AC)n	Simple_repeat	1	40	(0)	3363672
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
183	21.1	2.6	0.0	chr6	31796137	31796174	(139009805)	+	MIR3	SINE/MIR	109	147	(61)	3363904
20	19.0	3.6	1.7	chr6	33454843	33454898	(137351081)	+	(TGT)n	Simple_repeat	1	58	(0)	3366470
212	35.8	9.6	0.8	chr6	34115718	34115841	(136690138)	+	MIR3	SINE/MIR	8	143	(65)	3367661
23	25.1	0.0	0.0	chr6	34132556	34132614	(136673365)	+	(TCTG)n	Simple_repeat	1	59	(0)	3367692
15	32.3	0.0	0.0	chr6	34154531	34154582	(136651397)	+	(ATGG)n	Simple_repeat	1	52	(0)	3367731
44	0.0	0.0	0.0	chr6	34154591	34154628	(136651351)	+	(AC)n	Simple_repeat	1	38	(0)	3367732
602	27.7	7.8	0.5	chr6	34200362	34200564	(136605415)	C	L2b	LINE/L2	(202)	3173	2955	3367834
765	23.9	15.3	0.8	chr6	34200706	34200950	(136605029)	C	MLT1J	LTR/ERVL-MaLR	(159)	353	67	3367839
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
14	21.5	2.2	2.2	chr6	35452132	35452176	(135353803)	+	(CCCCCG)n	Simple_repeat	1	46	(0)	3370412
12	14.6	0.0	5.9	chr6	35688393	35688426	(135117553)	+	(GAGCCG)n	Simple_repeat	1	34	(0)	3370915
19	25.7	4.9	1.2	chr6	35731935	35731962	(135074017)	+	(GGAGCG)n	Simple_repeat	1	83	(0)	3371022
13	31.6	0.0	0.0	chr6	35731963	35732013	(135073966)	+	G-rich	Low_complexity	1	51	(0)	3371023
15	26.1	0.0	1.9	chr6	35805334	35805385	(135000594)	+	(GGAGCCG)n	Simple_repeat	1	52	(0)	3371201
14	25.3	2.0	2.0	chr6	37649091	37649139	(133156840)	+	(CGG)n	Simple_repeat	1	50	(0)	3375062
2142	11.6	0.3	0.0	chr6	42050104	42050397	(128755582)	+	AluSz	SINE/Alu	6	300	(12)	3382426
405	31.1	11.1	2.2	chr6	42177208	42177388	(128628591)	+	MIRb	SINE/MIR	70	268	(0)	3382719
310	31.9	4.3	0.1	chr6	42177381	42177491	(128628488)	C	MIRb	SINE/MIR	(58)	204	88	3382720
12	43.1	0.0	0.0	chr6	42452222	42452296	(128353683)	+	G-rich	Low_complexity	1	75	(0)	3383278
12	18.8	2.6	2.6	chr6	43575960	43575997	(127229982)	+	(GCGGCGG)n	Simple_repeat	1	39	(0)	3385604
19	16.6	4.3	0.0	chr6	43576024	43576070	(127229909)	+	(GCCCGC)n	Simple_repeat	1	49	(0)	3385605
30	0.0	0.0	0.0	chr6	44002767	44002794	(126803185)	+	(GCG)n	Simple_repeat	1	28	(0)	3386395
20	21.1	0.0	0.0	chr6	44127515	44127553	(126678426)	+	(C)n	Simple_repeat	1	39	(0)	3386612
17	11.7	2.6	2.5	chr6	44297771	44297810	(126508169)	+	(CGCTGC)n	Simple_repeat	1	40	(0)	3386924
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
14	23.1	2.1	2.1	chr6	53348858	53348904	(117457075)	+	(GGC)n	Simple_repeat	1	48	(0)	3400038
13	20.1	1.7	8.2	chr6	63572479	63572538	(107233441)	+	(CGGCT)n	Simple_repeat	1	61	(0)	3410802
34	24.6	2.0	1.0	chr6	63572569	63572666	(107233313)	+	(GCC)n	Simple_repeat	1	100	(0)	3410803
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
17	18.6	0.0	0.0	chr6	70956192	70956228	(99849751)	+	(GCGGCT)n	Simple_repeat	1	37	(0)	3419938
812	13.8	0.8	0.0	chr6	73452448	73452563	(97353416)	+	AluJo	SINE/Alu	1	117	(195)	3423470
2267	7.8	0.3	1.7	chr6	73452598	73452893	(97353086)	+	AluSx1	SINE/Alu	3	294	(18)	3423471
317	24.3	2.6	0.0	chr6	76120482	76120555	(94685424)	+	MamGypLTR3a	LTR/Gypsy	119	194	(787)	3427287
25779	5.4	0.3	0.0	chr6	78646743	78652881	(92153098)	+	L1PA4	LINE/L1	1	6155	(0)	3430252
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
13	18.8	4.5	2.2	chr6	79947434	79947477	(90858502)	+	(GCGGCAG)n	Simple_repeat	1	46	(0)	3431998
16	0.0	4.3	0.0	chr6	79947629	79947651	(90858328)	+	(CCCT)n	Simple_repeat	1	24	(0)	3431999
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
441	30.4	6.8	3.0	chr6	95576833	95577168	(75228811)	+	Charlie15b	DNA/hAT-Charlie	712	1061	(0)	3452634
15	17.6	0.0	4.8	chr6	95577454	95577495	(75228484)	+	(GCCCC)n	Simple_repeat	1	42	(0)	3452635
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
196	25.8	11.4	0.0	chr6	107459778	107459839	(63346140)	+	L2b	LINE/L2	3279	3348	(27)	3468895
15	7.0	6.7	0.0	chr6	107459945	107459974	(63346005)	+	(TGGCAG)n	Simple_repeat	1	32	(0)	3468896
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
3287	15.7	3.0	2.8	chr6	112879826	112880495	(57925484)	C	MER52C	LTR/ERV1	(607)	671	1	3477688
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
15	0.0	4.0	3.9	chr6	117907478	117907502	(52898477)	+	(CGG)n	Simple_repeat	1	26	(0)	3484467
18	29.5	3.6	1.1	chr6	117907700	117907783	(52898196)	+	(CGC)n	Simple_repeat	1	87	(0)	3484468
14	14.6	5.0	2.4	chr6	117907906	117907945	(52898034)	+	(GGCGG)n	Simple_repeat	1	42	(0)	3484469
17	15.4	3.6	5.2	chr6	117907946	117907959	(52898020)	+	G-rich	Low_complexity	3	58	(0)	3484470
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
283	29.4	1.1	5.2	chr6	125364059	125364155	(45441824)	+	MIR1_Amn	SINE/MIR	44	136	(94)	3494219
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
802	14.1	0.6	17.8	chr6	136823413	136823603	(33982376)	+	FRAM	SINE/Alu	1	158	(18)	3510539
21	3.7	0.0	0.0	chr6	137494073	137494100	(33311879)	+	(TGG)n	Simple_repeat	1	28	(0)	3511532
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
54	0.0	0.0	0.0	chr6	146028233	146028278	(24777701)	+	(GT)n	Simple_repeat	1	46	(0)	3523493
24	13.1	4.8	3.1	chr6	158536998	158537059	(12268920)	+	(GGACGG)n	Simple_repeat	1	65	(0)	3542687
11388	16.4	3.5	2.3	chr6	165049248	165051468	(5754511)	+	HUERS-P3b-int	LTR/ERV1	403	2652	(4766)	3551498
302	26.2	3.5	0.0	chr6	165842722	165842805	(4963174)	C	MIR1_Amn	SINE/MIR	(106)	124	38	3552452
261	29.1	14.7	3.8	chr6	165842868	165843024	(4962955)	+	MIRc	SINE/MIR	90	266	(2)	3552453
1169	27.4	3.8	1.6	chr6	167147072	167147457	(3658522)	C	MLT2C1	LTR/ERVL	(2)	395	1	3554084
15194	12.4	3.9	1.1	chr6	167351639	167352743	(3453236)	+	Tigger1	DNA/TcMar-Tigger	1	1172	(1246)	3554314
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
27	0.0	0.0	0.0	chr6	169702221	169702246	(1103733)	+	(CCCTGC)n	Simple_repeat	1	26	(0)	3556751
14	19.1	3.9	3.8	chr6	170306585	170306635	(499344)	+	(GCGTCC)n	Simple_repeat	1	53	(0)	3557311
13	28.8	0.0	0.0	chr6	170306744	170306824	(499155)	+	(GCGGAG)n	Simple_repeat	1	81	(0)	3557312
591	25.9	3.5	2.4	chr7	2402975	2403144	(156942829)	C	MIRb	SINE/MIR	(14)	254	83	3561338
348	32.4	9.8	3.3	chr7	5781978	5782069	(153563904)	C	L2a	LINE/L2	(0)	3426	3333	3567792
2264	10.6	0.7	0.0	chr7	5782070	5782370	(153563603)	+	AluSq	SINE/Alu	1	303	(10)	3567793
29	20.3	0.9	7.5	chr7	6503692	6503797	(152842176)	+	G-rich	Low_complexity	1	107	(0)	3569531
14	15.4	5.6	0.0	chr7	12686828	12686863	(146659110)	+	(GGCG)n	Simple_repeat	1	38	(0)	3577694
11	21.2	6.8	0.0	chr7	20784367	20784410	(138561563)	+	(CGCTGT)n	Simple_repeat	1	47	(0)	3588256
22	12.6	2.2	2.2	chr7	20784401	20784445	(138561528)	+	(GCC)n	Simple_repeat	1	46	(0)	3588257
13	24.9	4.6	2.9	chr7	23474085	23474149	(135871824)	+	(GCCGC)n	Simple_repeat	1	68	(0)	3592403
19	22.5	2.4	6.0	chr7	29989645	29989726	(129356247)	+	G-rich	Low_complexity	1	84	(0)	3602440
13	7.1	6.2	2.9	chr7	30594954	30594985	(128750988)	+	(TGCTGC)n	Simple_repeat	1	34	(0)	3603361
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
32	36.8	1.1	2.1	chr7	32495286	32495475	(126850498)	+	(GCCCC)n	Simple_repeat	1	192	(0)	3606331
14	22.9	0.0	6.9	chr7	32957516	32957573	(126388400)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3607085
12	21.5	2.5	2.4	chr7	37916454	37916518	(121429455)	+	(GCGCC)n	Simple_repeat	1	65	(0)	3614409
12	12.8	5.6	2.6	chr7	43758492	43758527	(115587446)	+	(GGCGCCA)n	Simple_repeat	1	38	(0)	3623125
23	15.4	1.9	1.9	chr7	43758557	43758608	(115587365)	+	(CCCTC)n	Simple_repeat	1	53	(0)	3623126
327	24.0	14.3	0.4	chr7	44122976	44123234	(115222739)	+	Charlie5	DNA/hAT-Charlie	2377	2624	(0)	3623833
12	21.9	3.9	3.8	chr7	44796964	44797014	(114548959)	+	(GCG)n	Simple_repeat	1	53	(0)	3624883
756	24.9	11.4	8.2	chr7	56064542	56064591	(103281382)	C	L1MC5	LINE/L1	(4)	9300	9250	3639841
359	24.2	14.3	0.6	chr7	66413115	66413315	(92932658)	C	FLAM_C	SINE/Alu	(2)	300	45	3649935
17	4.9	0.0	0.0	chr7	66628734	66628754	(92717219)	+	(C)n	Simple_repeat	1	21	(0)	3650448
12	20.9	6.8	0.0	chr7	66740842	66740885	(92605088)	+	G-rich	Low_complexity	1	47	(0)	3650717
14	25.8	2.1	0.0	chr7	72337022	72337068	(87008905)	+	(CCCGCT)n	Simple_repeat	1	48	(0)	3662110
306	24.6	19.8	0.8	chr7	73308961	73309091	(86036882)	C	L1M5	LINE/L1	(601)	5523	5362	3664325
21	16.8	3.0	5.8	chr7	73557632	73557698	(85788275)	+	(CGC)n	Simple_repeat	1	69	(0)	3664904
13	17.4	5.3	5.0	chr7	73557829	73557885	(85788088)	+	(CGAGGTG)n	Simple_repeat	1	60	(0)	3664905
21	29.9	3.7	1.8	chr7	74289798	74289906	(85056067)	+	G-rich	Low_complexity	1	113	(0)	3666691
39	6.3	0.0	0.0	chr7	74657649	74657698	(84688275)	+	(A)n	Simple_repeat	1	50	(0)	3667694
21	23.0	4.3	4.1	chr7	75527828	75527920	(83818053)	+	(CCGCCT)n	Simple_repeat	1	97	(0)	3669848
14	19.7	4.2	2.0	chr7	75914944	75914991	(83430982)	+	(GCCGG)n	Simple_repeat	1	50	(0)	3670900
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
13	7.1	0.0	10.8	chr7	76235025	76235061	(83110912)	+	G-rich	Low_complexity	1	37	(0)	3671661
208	25.6	11.8	1.2	chr7	76302296	76302378	(83043595)	+	MIRb	SINE/MIR	58	150	(118)	3671827
23	27.0	3.6	0.0	chr7	76358916	76359003	(82986970)	+	(GCGGCT)n	Simple_repeat	1	91	(0)	3671939
13	20.1	2.0	5.8	chr7	76359060	76359110	(82986863)	+	(CCCG)n	Simple_repeat	1	52	(0)	3671940
13	25.0	2.0	2.0	chr7	76397687	76397735	(82948238)	+	(CCCGCAG)n	Simple_repeat	1	50	(0)	3672048
495	31.6	6.8	1.7	chr7	92424736	92424970	(66921003)	+	L4_A_Mam	LINE/RTE-X	4740	4987	(3)	3693857
26	22.3	3.5	2.2	chr7	92447832	92447918	(66898055)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	3693909
13	16.0	0.0	3.2	chr7	94656131	94656161	(64689812)	+	(CTCCC)n	Simple_repeat	1	31	(0)	3696936
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
13	13.8	8.1	7.5	chr7	98617438	98617511	(60728462)	+	(GCTGGC)n	Simple_repeat	1	80	(0)	3702997
49	19.1	3.5	5.6	chr7	99144016	99144187	(60201786)	+	(GCCGCC)n	Simple_repeat	1	178	(0)	3704036
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
22	19.5	0.0	3.5	chr7	100100466	100100522	(59245451)	+	(CCCCCG)n	Simple_repeat	1	57	(0)	3705858
2068	13.6	0.0	0.0	chr7	100158873	100159174	(59186799)	+	AluJr	SINE/Alu	1	302	(10)	3705978
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
1331	17.2	0.0	5.3	chr7	101058300	101058545	(58287428)	+	7SK	RNA	2	234	(97)	3707869
260	26.4	1.1	8.1	chr7	101058611	101058709	(58287264)	C	MIRc	SINE/MIR	(1)	267	176	3707870
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
188	25.7	20.4	2.7	chr7	101362507	101362618	(57983355)	+	MIRb	SINE/MIR	110	246	(22)	3708615
13	18.9	8.3	0.0	chr7	104328380	104328427	(55017546)	+	G-rich	Low_complexity	1	52	(0)	3713983
312	27.9	9.8	7.3	chr7	106285214	106285391	(53060582)	C	L1M4b	LINE/L1	(6487)	380	198	3717380
400	32.0	6.3	1.7	chr7	108347920	108348120	(50997853)	+	L2c	LINE/L2	3178	3372	(3)	3720399
13	16.2	0.0	0.0	chr7	108526157	108526184	(50819789)	+	(CCCGC)n	Simple_repeat	1	28	(0)	3720663
12	24.4	2.6	0.0	chr7	112450737	112450775	(46895198)	+	(GGC)n	Simple_repeat	1	40	(0)	3725834
3987	13.7	14.4	3.2	chr7	122678822	122679810	(36666163)	+	MER11B	LTR/ERVK	1	1222	(14)	3739405
224	27.9	11.7	0.0	chr7	127651201	127651268	(31694705)	+	MIRb	SINE/MIR	186	262	(6)	3746051
14	13.2	2.9	2.8	chr7	128032521	128032567	(31313406)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	3746523
14	21.2	7.2	4.5	chr7	128352153	128352235	(30993738)	+	(GCCAG)n	Simple_repeat	1	89	(0)	3747054
12	0.0	8.0	3.7	chr7	128791339	128791363	(30554610)	+	(GGC)n	Simple_repeat	1	27	(0)	3747978
12	21.7	0.0	0.0	chr7	128791385	128791416	(30554557)	+	(CCCT)n	Simple_repeat	1	32	(0)	3747979
15	18.3	2.1	4.2	chr7	129188540	129188586	(30157387)	+	(CTCCC)n	Simple_repeat	1	48	(0)	3748679
12	22.1	0.0	0.0	chr7	129434515	129434546	(29911427)	+	(AACGGC)n	Simple_repeat	1	32	(0)	3749137
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
2232	10.5	0.7	0.7	chr7	131547093	131547398	(27798575)	+	AluSp	SINE/Alu	2	307	(6)	3752993
918	17.6	1.7	0.0	chr7	134141257	134141432	(25204541)	C	MER5A	DNA/hAT-Charlie	(10)	179	1	3757026
506	28.7	10.3	1.4	chr7	134358174	134358385	(24987588)	+	MIRb	SINE/MIR	9	241	(27)	3757364
2399	6.3	0.0	0.0	chr7	134358528	134358811	(24987162)	+	AluSx4	SINE/Alu	1	284	(26)	3757365
3710	10.6	1.6	14.0	chr7	138527776	138528547	(20817426)	C	LTR76	LTR/ERV1	(0)	675	1	3763805
18	25.3	4.2	1.3	chr7	139035791	139035862	(20310111)	+	(CCGCCT)n	Simple_repeat	1	75	(0)	3764776
675	29.3	4.6	1.4	chr7	140479687	140479936	(18866037)	+	MIRb	SINE/MIR	1	261	(7)	3767542
218	31.4	12.5	5.7	chr7	140641383	140641679	(18704294)	C	L2b	LINE/L2	(84)	3291	2972	3767938
1965	11.9	0.3	5.5	chr7	141333691	141334000	(18011973)	C	MER1B	DNA/hAT-Charlie	(0)	339	46	3769126
17551	14.3	3.3	2.1	chr7	142362968	142366073	(16979900)	C	L1M1	LINE/L1	(3735)	3830	686	3770553
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
3598	11.6	5.5	4.0	chr7	149145290	149145884	(10200089)	+	LTR26D	LTR/ERV1	1	604	(0)	3780148
13	28.0	0.0	4.9	chr7	150323401	150323461	(9022512)	+	G-rich	Low_complexity	1	61	(0)	3781882
427	32.1	2.1	1.4	chr7	150323695	150323836	(9022137)	C	MIR	SINE/MIR	(3)	259	117	3781883
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
19	11.3	0.0	4.8	chr7	151009618	151009659	(8336314)	+	(CCAGCC)n	Simple_repeat	1	42	(0)	3782782
18	10.9	11.1	2.9	chr7	151009660	151009680	(8336293)	+	(CCAGGCC)n	Simple_repeat	1	70	(0)	3782783
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
13	28.0	0.0	4.9	chr7	151062405	151062465	(8283508)	+	(CCCGC)n	Simple_repeat	1	61	(0)	3782841
473	32.9	4.1	0.6	chr7	151080356	151080520	(8265453)	+	MIRb	SINE/MIR	5	175	(93)	3782870
12	21.2	7.1	1.7	chr7	151080620	151080675	(8265298)	+	(GCCGCT)n	Simple_repeat	1	60	(0)	3782871
255	35.9	0.0	1.5	chr7	151104773	151104902	(8241071)	+	L1ME3Cz	LINE/L1	426	553	(444)	3782917
15	5.8	7.5	4.7	chr7	151440168	151440207	(7905766)	+	(GCCCT)n	Simple_repeat	1	43	(0)	3783433
338	28.6	1.7	3.2	chr7	151455388	151455510	(7890463)	+	MER5A1	DNA/hAT-Charlie	13	133	(33)	3783476
12	12.6	8.6	0.0	chr7	151520269	151520303	(7825670)	+	(GGCGCGT)n	Simple_repeat	1	38	(0)	3783579
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
12	17.6	0.0	5.6	chr7	157010779	157010814	(2335159)	+	(CCGCC)n	Simple_repeat	1	36	(0)	3791706
946	25.5	13.5	4.7	chr7	157298490	157298759	(2047214)	+	MLT1C	LTR/ERVL-MaLR	184	467	(0)	3792222
402	7.2	10.2	2.5	chr7	157298928	157299839	(2046134)	+	(TG)n	Simple_repeat	1	981	(0)	3792224
2535	6.4	0.0	1.6	chr7	158855935	158856245	(489728)	C	AluYh3	SINE/Alu	(5)	306	1	3793798
31	3.0	0.0	0.0	chr8	406755	406788	(144731848)	+	(CCCCACGC)n	Simple_repeat	1	34	(0)	3794795
26352	4.9	0.3	0.1	chr8	5187030	5193146	(139945490)	+	L1PA3	LINE/L1	9	6137	(18)	3800323
12	17.4	8.9	0.0	chr8	6708877	6708921	(138429715)	+	(CCGGCGTC)n	Simple_repeat	1	49	(0)	3802489
242	33.3	6.6	0.7	chr8	8387015	8387156	(136751480)	+	MIR3	SINE/MIR	6	156	(52)	3804620
22	10.4	0.0	0.0	chr8	9950196	9950227	(135188409)	+	(GT)n	Simple_repeat	1	32	(0)	3807331
21	0.0	0.0	0.0	chr8	10335251	10335273	(134803363)	+	(T)n	Simple_repeat	1	23	(0)	3807903
14	0.0	0.0	0.0	chr8	17246694	17246711	(127891925)	+	(CTC)n	Simple_repeat	1	18	(0)	3817918
27	6.1	0.0	0.0	chr8	17246733	17246767	(127891869)	+	(GGCGGT)n	Simple_repeat	1	35	(0)	3817919
17	20.2	0.0	0.0	chr8	18085204	18085237	(127053399)	+	(T)n	Simple_repeat	1	34	(0)	3819163
261	42.1	1.3	2.2	chr8	22188618	22188843	(122949793)	C	L3	LINE/CR1	(3415)	684	461	3825724
273	31.1	7.4	7.3	chr8	22189036	22189433	(122949203)	C	L1ME4b	LINE/L1	(68)	824	492	3825725
14	22.0	2.0	3.9	chr8	22367197	22367247	(122771389)	+	G-rich	Low_complexity	1	52	(0)	3826083
13	0.0	0.0	0.0	chr8	26383168	26383184	(118755452)	+	(ACA)n	Simple_repeat	1	17	(0)	3832642
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
12	14.4	0.0	0.0	chr8	30095456	30095479	(115043157)	+	(GCC)n	Simple_repeat	1	24	(0)	3839029
890	16.1	1.2	2.4	chr8	30728259	30728426	(114410210)	C	FRAM	SINE/Alu	(10)	166	1	3840309
303	29.9	15.9	6.7	chr8	30812448	30812759	(114325877)	+	L1M4b	LINE/L1	207	552	(6315)	3840504
200	24.6	6.6	5.0	chr8	30813123	30813182	(114325454)	+	L2c	LINE/L2	3327	3387	(0)	3840505
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
13	26.1	0.0	0.0	chr8	41307039	41307079	(103831557)	+	G-rich	Low_complexity	1	41	(0)	3856773
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
4141	14.4	23.4	1.8	chr8	47765223	47766183	(97372453)	+	MER11B	LTR/ERVK	1	1232	(4)	3862368
25	12.2	0.0	0.0	chr8	49911552	49911588	(95227048)	+	(A)n	Simple_repeat	1	37	(0)	3865001
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
9124	7.2	15.8	1.2	chr8	52969067	52970411	(92168225)	C	LTR12C	LTR/ERV1	(0)	1579	2	3868937
28	0.0	0.0	0.0	chr8	54022277	54022302	(91116334)	+	(GCG)n	Simple_repeat	1	26	(0)	3870336
613	28.2	8.4	1.1	chr8	55001165	55001429	(90137207)	+	MamRep4096	DNA/hAT-Tip100	1	286	(140)	3871858
13	24.4	2.2	2.1	chr8	55103145	55103190	(90035446)	+	(CAG)n	Simple_repeat	1	47	(0)	3871977
1681	21.4	3.1	1.1	chr8	60395847	60396219	(84742417)	C	MER58D	DNA/hAT-Charlie	(5)	381	1	3879079
25	21.4	6.3	2.0	chr8	60516807	60516901	(84621735)	+	G-rich	Low_complexity	1	101	(0)	3879292
19	20.3	4.5	2.9	chr8	60516917	60516982	(84621654)	+	(CGG)n	Simple_repeat	1	69	(0)	3879293
17	14.6	0.0	6.8	chr8	60517072	60517115	(84621521)	+	(CGG)n	Simple_repeat	1	44	(0)	3879294
12	20.4	5.6	3.5	chr8	61288286	61288339	(83850297)	+	(CCGCTCC)n	Simple_repeat	1	57	(0)	3880437
13	15.2	0.0	3.2	chr8	61714631	61714661	(83423975)	+	(GCCCC)n	Simple_repeat	1	31	(0)	3881000
543	0.0	0.0	21.5	chr8	66113367	66113459	(79025177)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886877
2246	6.7	6.9	0.0	chr8	67368539	67368823	(77769813)	+	AluSc	SINE/Alu	2	307	(2)	3889134
4750	10.0	2.6	3.5	chr8	67368824	67369267	(77769369)	+	LTR8	LTR/ERV1	232	690	(1)	3889132
24	24.6	0.0	0.0	chr8	68330773	68330826	(76807810)	+	(AC)n	Simple_repeat	1	54	(0)	3890566
13	12.4	5.4	2.6	chr8	68330970	68331006	(76807630)	+	(GCGGAGA)n	Simple_repeat	1	39	(0)	3890567
1033	23.2	6.8	4.6	chr8	73449183	73449553	(71689083)	C	MLT1B	LTR/ERVL-MaLR	(10)	380	1	3898003
12	20.2	0.0	6.7	chr8	78665979	78666023	(66472613)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	3904970
1667	19.1	3.4	0.0	chr8	83825031	83825318	(61313318)	+	AluJo	SINE/Alu	3	300	(12)	3912344
18	16.0	0.0	0.0	chr8	85107298	85107332	(60031304)	+	(GGC)n	Simple_repeat	1	35	(0)	3914051
1824	20.7	11.7	0.2	chr8	86068929	86069383	(59069253)	C	MER67D	LTR/ERV1	(0)	514	1	3915435
2131	11.1	13.6	2.6	chr8	92131656	92132034	(53006602)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	3923469
2654	11.3	2.0	0.2	chr8	92132036	92132434	(53006202)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1226	3923469
14	13.8	0.0	5.6	chr8	94475139	94475174	(50663462)	+	(CCTGC)n	Simple_repeat	1	36	(0)	3926896
185	26.7	7.7	0.0	chr8	94475260	94475319	(50663317)	C	L2b	LINE/L2	(8)	3418	3354	3926897
15	31.6	0.0	1.6	chr8	95133656	95133719	(50004917)	+	G-rich	Low_complexity	1	64	(0)	3928263
18	29.8	1.8	0.0	chr8	95133723	95133779	(50004857)	+	(GC)n	Simple_repeat	1	58	(0)	3928264
419	31.5	5.2	0.5	chr8	96162098	96162282	(48976354)	C	MIRc	SINE/MIR	(66)	202	9	3929830
59	0.0	0.0	0.0	chr8	98974793	98974842	(46163794)	+	(GT)n	Simple_repeat	1	50	(0)	3934522
6959	16.7	14.7	3.0	chr8	100907236	100908779	(44229857)	C	MER52A	LTR/ERV1	(0)	1755	1	3937770
22	27.2	1.0	5.7	chr8	101205283	101205386	(43933250)	+	(CCCGCCC)n	Simple_repeat	1	105	(0)	3938341
13	21.2	2.1	4.2	chr8	102655686	102655732	(42482904)	+	(CGC)n	Simple_repeat	1	48	(0)	3940827
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
21	22.1	0.0	1.8	chr8	102655972	102656027	(42482609)	+	(CGCCCCC)n	Simple_repeat	1	56	(0)	3940829
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
37	19.9	2.3	6.1	chr8	119208358	119208486	(25930150)	+	(GCG)n	Simple_repeat	1	132	(0)	3964522
21	14.7	0.0	0.0	chr8	122783046	122783083	(22355553)	+	(GGA)n	Simple_repeat	1	38	(0)	3970519
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
4356	17.1	0.9	2.3	chr8	128688773	128689544	(16449092)	C	LTR1B1	LTR/ERV1	(65)	753	1	3981912
424	28.1	6.1	13.2	chr8	139896363	139896628	(5242008)	C	MIRb	SINE/MIR	(4)	264	19	4001042
1571	29.8	19.6	2.7	chr8	141515349	141516712	(3621924)	+	L2b	LINE/L2	670	2367	(1052)	4003731
298	24.0	2.6	5.1	chr8	141516957	141517035	(3621601)	+	L2a	LINE/L2	3337	3413	(13)	4003733
1768	30.4	5.0	5.1	chr8	141887982	141889587	(3249049)	+	L1ME3Cz	LINE/L1	4037	5636	(666)	4004264
769	25.6	1.7	0.4	chr8	141889611	141889838	(3248798)	C	MER20B	DNA/hAT-Charlie	(31)	752	522	4004265
84	5.8	3.1	1.5	chr8	142217277	142217405	(2921231)	+	(AAAG)n	Simple_repeat	1	133	(0)	4004661
213	31.7	7.9	0.0	chr8	142383649	142383730	(2754906)	C	MIRb	SINE/MIR	(15)	253	165	4004833
530	28.4	8.9	3.9	chr8	142631863	142632096	(2506540)	C	MLT1F2	LTR/ERVL-MaLR	(20)	540	294	4005122
37	0.0	0.0	0.0	chr8	142632098	142632129	(2506507)	+	(AC)n	Simple_repeat	1	32	(0)	4005123
12	16.7	5.9	0.0	chr8	143227790	143227823	(1910813)	+	(CCCTG)n	Simple_repeat	1	36	(0)	4005934
340	26.3	5.0	8.3	chr8	143281609	143281836	(1856800)	C	LTR50	LTR/ERVL	(509)	286	67	4006009
268	34.5	12.0	1.7	chr8	143482009	143482247	(1656389)	+	L2b	LINE/L2	2803	3069	(350)	4006264
368	24.0	11.3	0.0	chr8	144137081	144137205	(1001431)	+	MLT1K	LTR/ERVL-MaLR	454	594	(1)	4007183
26	0.0	0.0	0.0	chr8	144327559	144327583	(811053)	+	(GAGGGC)n	Simple_repeat	1	25	(0)	4007453
11	23.9	7.4	0.0	chr8	144358704	144358757	(779879)	+	G-rich	Low_complexity	1	58	(0)	4007510
2640	3.9	0.0	0.0	chr8	144428784	144429088	(709548)	C	AluY	SINE/Alu	(6)	305	1	4007614
14	22.1	0.0	4.3	chr8	144475888	144475933	(662703)	+	G-rich	Low_complexity	1	46	(0)	4007649
221	24.7	10.8	1.1	chr8	144901812	144901987	(236649)	+	L2a	LINE/L2	2962	3156	(270)	4008270
12	4.5	4.0	3.9	chr9	2621364	2621388	(135773329)	+	(CTG)n	Simple_repeat	1	26	(0)	4012375
30	27.1	1.7	7.2	chr9	6645353	6645529	(131749188)	+	(GGCCCC)n	Simple_repeat	1	180	(0)	4018392
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
2181	8.1	0.0	6.2	chr9	19380563	19380869	(119013848)	+	AluSx1	SINE/Alu	1	288	(24)	4036215
16	21.5	0.0	2.2	chr9	19789097	19789141	(118605576)	+	(CTGTGCG)n	Simple_repeat	1	45	(0)	4036889
20	8.8	2.6	2.5	chr9	23825207	23825245	(114569472)	+	(CAGCCC)n	Simple_repeat	1	40	(0)	4042335
28	0.0	0.0	0.0	chr9	27573209	27573234	(110821483)	+	(CGC)n	Simple_repeat	1	26	(0)	4047383
185	24.4	0.0	0.0	chr9	27574061	27574105	(110820612)	+	L2a	LINE/L2	3377	3421	(5)	4047385
12	24.7	1.4	8.1	chr9	34380815	34380887	(104013830)	+	(GGCGG)n	Simple_repeat	1	74	(0)	4057338
953	35.1	12.9	3.0	chr9	34411811	34413345	(103981372)	C	L2c	LINE/L2	(249)	3138	1429	4057389
1572	15.0	0.0	12.4	chr9	34430667	34430860	(103963857)	+	AluJb	SINE/Alu	134	301	(11)	4057418
13	30.6	0.0	6.2	chr9	34990136	34990216	(103404501)	+	(CCGCC)n	Simple_repeat	1	81	(0)	4058208
308	20.7	3.9	13.3	chr9	35080271	35080443	(103314274)	+	L1M4	LINE/L1	4897	5052	(1094)	4058321
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
191	13.3	0.0	0.0	chr9	36166429	36166458	(102228259)	+	MIR1_Amn	SINE/MIR	125	154	(76)	4060086
253	25.9	0.0	1.7	chr9	36748238	36748296	(101646421)	+	MIRb	SINE/MIR	206	263	(5)	4061380
292	33.3	5.0	3.5	chr9	37576487	37576741	(100817976)	+	L3	LINE/CR1	3736	3994	(105)	4062961
1219	8.5	0.0	2.4	chr9	37592779	37592942	(100801775)	+	AluSx	SINE/Alu	125	284	(28)	4062992
17	9.1	2.6	5.0	chr9	37785063	37785101	(100609616)	+	(CCGCTT)n	Simple_repeat	1	40	(0)	4063381
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
29	5.8	0.0	0.0	chr9	71768574	71768609	(66626108)	+	(CCT)n	Simple_repeat	1	36	(0)	4085192
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
180	18.2	0.0	0.0	chr9	83623330	83623362	(54771355)	C	MIR3	SINE/MIR	(60)	148	116	4103206
23852	7.3	1.0	0.6	chr9	85717680	85723818	(52670899)	C	L1PA6	LINE/L1	(0)	6327	178	4106622
13	21.6	0.0	0.0	chr9	86945965	86945996	(51448721)	+	(TCG)n	Simple_repeat	1	32	(0)	4108700
2439	8.4	0.0	0.6	chr9	87975047	87975357	(50419360)	+	AluSx3	SINE/Alu	1	309	(2)	4110238
471	24.7	15.3	8.5	chr9	91033557	91033755	(47360962)	+	MER58C	DNA/hAT-Charlie	1	215	(0)	4114602
18	12.4	0.0	2.7	chr9	93059193	93059233	(45335484)	+	G-rich	Low_complexity	1	39	(0)	4117635
244	21.3	1.3	0.5	chr9	94165714	94165828	(44228889)	C	MIR	SINE/MIR	(98)	170	57	4119125
3498	19.9	8.0	9.9	chr9	95313470	95314308	(43080409)	+	L1M4	LINE/L1	3483	4355	(1791)	4121014
12	26.0	2.1	2.0	chr9	95507770	95507817	(42886900)	+	G-rich	Low_complexity	1	49	(0)	4121302
23	3.7	0.0	0.0	chr9	95507906	95507933	(42886784)	+	(AC)n	Simple_repeat	1	28	(0)	4121303
28	24.6	0.0	0.0	chr9	95508033	95508095	(42886622)	+	(GT)n	Simple_repeat	1	63	(0)	4121304
452	24.4	17.9	3.9	chr9	95876251	95876455	(42518262)	+	MIR	SINE/MIR	17	256	(6)	4121894
50	23.0	3.8	5.9	chr9	97803191	97803463	(40591254)	+	GA-rich	Low_complexity	1	267	(0)	4125170
15	13.7	0.0	2.9	chr9	97803548	97803581	(40591136)	+	(CCGCCC)n	Simple_repeat	1	34	(0)	4125171
12	14.6	0.0	5.9	chr9	97983743	97983776	(40410941)	+	(GGCG)n	Simple_repeat	1	34	(0)	4125546
13	19.2	3.8	5.5	chr9	98192622	98192674	(40202043)	+	(CGC)n	Simple_repeat	1	55	(0)	4126035
12	7.2	10.3	0.0	chr9	98192676	98192704	(40202013)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4126036
325	33.3	2.6	2.4	chr9	98192889	98193096	(40201621)	+	MIR	SINE/MIR	40	246	(22)	4126037
2307	7.5	0.3	2.6	chr9	104764541	104764845	(33629872)	C	AluSx3	SINE/Alu	(13)	298	1	4136224
29	24.3	5.2	3.5	chr9	106860928	106861063	(31533654)	+	(CTCCTTT)n	Simple_repeat	1	143	(0)	4139690
210	29.9	13.4	0.0	chr9	108933357	108933453	(29461264)	C	L2c	LINE/L2	(16)	3371	3260	4143524
12	18.4	5.4	0.0	chr9	108933745	108933781	(29460936)	+	(GCAGCCC)n	Simple_repeat	1	39	(0)	4143525
13	17.8	0.0	2.9	chr9	111524913	111524946	(26869771)	+	G-rich	Low_complexity	1	34	(0)	4148037
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
15	9.4	5.6	2.6	chr9	114504708	114504743	(23889974)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	4153793
851	12.0	0.8	0.8	chr9	114610940	114611064	(23783653)	+	AluJr	SINE/Alu	1	125	(187)	4154051
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
733	13.2	0.0	3.3	chr9	122346541	122346661	(16048056)	C	AluJr	SINE/Alu	(76)	236	120	4168863
188	28.0	0.0	0.0	chr9	122346664	122346713	(16048004)	+	L2b	LINE/L2	3301	3350	(25)	4168864
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
17	12.8	0.0	2.8	chr9	124502999	124503034	(13891683)	+	(CCCCCA)n	Simple_repeat	1	36	(0)	4172700
14	20.6	2.6	0.0	chr9	124503466	124503504	(13891213)	+	(CCGCCG)n	Simple_repeat	1	40	(0)	4172701
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
445	38.2	4.4	1.2	chr9	125732810	125733053	(12661664)	C	MLT1O	LTR/ERVL-MaLR	(220)	322	71	4175240
411	33.0	2.6	0.5	chr9	126705563	126705751	(11688966)	C	MIRb	SINE/MIR	(26)	242	50	4176869
321	24.2	3.9	3.9	chr9	127396022	127396124	(10998593)	C	MIRb	SINE/MIR	(51)	217	115	4178129
1772	12.2	0.8	0.0	chr9	127445810	127446047	(10948670)	+	AluSg	SINE/Alu	53	292	(18)	4178226
1967	9.4	8.9	0.0	chr9	127698906	127699181	(10695536)	C	AluSz	SINE/Alu	(9)	303	1	4178821
252	32.0	5.3	10.8	chr9	127751470	127751728	(10642989)	C	L2c	LINE/L2	(4)	3371	3128	4178929
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
296	32.3	10.7	2.5	chr9	128344570	128344731	(10049986)	C	L2b	LINE/L2	(8)	3367	3191	4180298
529	35.5	1.5	0.5	chr9	128344809	128345009	(10049708)	+	MIRb	SINE/MIR	5	207	(61)	4180299
239	31.2	14.7	7.1	chr9	128361862	128362030	(10032687)	C	MIRc	SINE/MIR	(83)	185	2	4180343
559	26.3	15.2	0.9	chr9	128362587	128362805	(10031912)	+	MIR	SINE/MIR	2	257	(5)	4180344
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
19	13.8	2.5	0.0	chr9	129027023	129027062	(9367655)	+	(ACAACG)n	Simple_repeat	1	41	(0)	4181906
284	19.1	17.6	1.1	chr9	129027111	129027200	(9367517)	C	MIRb	SINE/MIR	(70)	198	91	4181907
402	32.2	3.8	1.0	chr9	129027215	129027421	(9367296)	C	MIRb	SINE/MIR	(3)	265	45	4181908
212	34.1	3.6	4.3	chr9	129139771	129139911	(9254806)	+	MIR3	SINE/MIR	1	140	(68)	4182167
2257	7.9	0.0	0.0	chr9	129333371	129333678	(9061039)	C	AluSg	SINE/Alu	(0)	310	1	4182590
289	26.2	17.7	1.7	chr9	129333714	129334014	(9060703)	+	L2b	LINE/L2	2805	3159	(228)	4182591
13	22.7	3.6	3.5	chr9	129665551	129665605	(8729112)	+	G-rich	Low_complexity	1	57	(0)	4183353
20	21.3	4.9	3.5	chr9	130681524	130681604	(7713113)	+	(GCGCAC)n	Simple_repeat	1	85	(0)	4185574
39	0.0	0.0	0.0	chr9	130681606	130681641	(7713076)	+	(CGC)n	Simple_repeat	1	36	(0)	4185575
43	12.4	7.3	0.0	chr9	131096389	131096484	(7298233)	+	G-rich	Low_complexity	1	103	(0)	4186388
14	24.0	4.5	2.9	chr9	131096693	131096759	(7297958)	+	G-rich	Low_complexity	1	70	(0)	4186389
12	24.4	0.0	4.3	chr9	131096868	131096914	(7297803)	+	(GCGCCGC)n	Simple_repeat	1	47	(0)	4186390
17	16.3	3.2	6.2	chr9	131097001	131097062	(7297655)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	4186391
830	18.2	0.0	1.4	chr9	131097253	131097395	(7297322)	C	AluJb	SINE/Alu	(45)	267	127	4186392
294	24.6	25.9	0.0	chr9	131126007	131126132	(7268585)	C	MIRb	SINE/MIR	(8)	260	91	4186460
320	32.7	3.2	1.9	chr9	131776501	131776656	(6618061)	C	MIR3	SINE/MIR	(7)	201	44	4187689
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
20	8.8	7.7	3.6	chr9	133375984	133376035	(5018682)	+	(GCTC)n	Simple_repeat	1	56	(0)	4190476
20	10.4	0.0	3.0	chr9	135098780	135098812	(3295905)	+	(TG)n	Simple_repeat	1	33	(0)	4192762
17	9.4	2.8	2.7	chr9	136205161	136205196	(2189521)	+	(CGCC)n	Simple_repeat	1	37	(0)	4194150
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
12	26.5	3.2	3.1	chr9	136410607	136410668	(1984049)	+	(AGCGGA)n	Simple_repeat	1	64	(0)	4194344
14	7.5	3.3	3.2	chr9	136975825	136975854	(1418863)	+	(CCAG)n	Simple_repeat	1	31	(0)	4195071
2201	11.1	1.3	0.0	chr9	137046811	137047108	(1347609)	C	AluSx	SINE/Alu	(9)	303	2	4195149
11	24.7	7.5	4.0	chr9	137139749	137139841	(1254876)	+	(CCTCCAT)n	Simple_repeat	1	100	(0)	4195292
13	18.1	0.0	7.0	chr9	137240441	137240446	(1154271)	+	(GCCCC)n	Simple_repeat	1	13	(30)	4195375
17	7.9	0.0	0.0	chr9	137240447	137240473	(1154244)	+	(CCCCT)n	Simple_repeat	1	27	(0)	4195376
13	18.1	0.0	7.0	chr9	137240474	137240483	(1154234)	+	(GCCCC)n	Simple_repeat	14	43	(0)	4195375
1971	10.5	1.1	2.5	chrX	1381929	1382248	(154658647)	C	AluSx3	SINE/Alu	(0)	311	1	4360865
256	12.2	0.0	0.0	chrX	1382249	1382289	(154658606)	C	Alu	SINE/Alu	(92)	41	1	4360866
234	30.7	1.3	0.0	chrX	1418347	1418421	(154622474)	+	MLT1J	LTR/ERVL-MaLR	231	306	(206)	4360948
309	22.9	6.8	0.0	chrX	1418461	1418556	(154622339)	+	MLT1J	LTR/ERVL-MaLR	211	313	(199)	4360949
15	12.9	2.8	2.7	chrX	1452708	1452743	(154588152)	+	(CCGGCC)n	Simple_repeat	1	37	(0)	4361000
14	12.2	0.0	0.0	chrX	2609232	2609258	(153431637)	+	(GGGCG)n	Simple_repeat	1	27	(0)	4363229
15	8.8	0.0	0.0	chrX	21374132	21374155	(134666740)	+	(CGC)n	Simple_repeat	1	24	(0)	4394393
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
22	13.1	6.0	0.0	chrX	38804021	38804070	(117236825)	+	(CCTGC)n	Simple_repeat	1	53	(0)	4419535
12	20.1	4.1	3.9	chrX	47619918	47619966	(108420929)	+	(CGCGG)n	Simple_repeat	1	51	(0)	4434536
246	30.8	5.7	7.1	chrX	72018233	72018428	(84022467)	+	MIRb	SINE/MIR	8	200	(68)	4462538
52	22.0	0.8	0.0	chrX	73563335	73563363	(82477532)	+	GA-rich	Low_complexity	1	29	(0)	4464581
29	3.2	0.0	0.0	chrX	73563364	73563395	(82477500)	+	(CGT)n	Simple_repeat	1	32	(0)	4464582
52	22.0	0.8	0.0	chrX	73563396	73563487	(82477408)	+	GA-rich	Low_complexity	30	122	(0)	4464583
12	13.6	6.8	4.3	chrX	74924493	74924536	(81116359)	+	(CCATGC)n	Simple_repeat	1	47	(0)	4466272
14	14.6	0.0	3.1	chrX	133985348	133985379	(22055516)	+	(GGC)n	Simple_repeat	1	32	(0)	4541901
51	29.3	1.3	4.6	chrX	133985596	133985833	(22055062)	+	G-rich	Low_complexity	1	241	(0)	4541902