463	1.3	0.6	1.7	chr1	10001	10468	(248945954)	+	(TAACCC)n	Simple_repeat	1	471	(0)	1
528	6.5	1.3	4.5	chr1	180089	180998	(248775424)	+	(ACCCTA)n	Simple_repeat	1	922	(0)	268
3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
15	15.5	7.0	0.0	chr1	1116237	1116279	(247840143)	+	G-rich	Low_complexity	1	46	(0)	1382
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
12	15.7	2.6	5.0	chr1	1273983	1274021	(247682401)	+	G-rich	Low_complexity	1	40	(0)	1544
17	9.2	5.7	0.0	chr1	1308179	1308213	(247648209)	+	(GGGCGC)n	Simple_repeat	1	37	(0)	1575
16	13.1	0.0	0.0	chr1	1308541	1308565	(247647857)	+	(G)n	Simple_repeat	1	25	(0)	1576
658	26.0	8.2	5.9	chr1	1318170	1318365	(247638057)	+	L1MEg	LINE/L1	1434	1639	(4445)	1585
1580	14.7	6.4	3.1	chr1	1318377	1318662	(247637760)	+	AluJb	SINE/Alu	2	297	(15)	1587
29	3.2	0.0	0.0	chr1	1658919	1658950	(247297472)	+	(CGC)n	Simple_repeat	1	32	(0)	2112
633	15.8	5.8	1.4	chr1	3650290	3650437	(245305985)	+	MER53	DNA/hAT	22	176	(17)	4182
13	16.5	11.1	0.0	chr1	3747455	3747508	(245208914)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	4292
16	3.3	0.0	10.0	chr1	3796670	3796691	(245159731)	+	(GGGTG)n	Simple_repeat	1	19	(0)	4362
4056	13.3	0.5	8.9	chr1	3796692	3797417	(245159005)	C	MER4A	LTR/ERV1	(0)	664	1	4363
13	4.2	8.0	0.0	chr1	6236099	6236123	(242720299)	+	(CCCG)n	Simple_repeat	1	27	(0)	7886
17	19.5	0.0	0.0	chr1	8048230	8048260	(240908162)	+	A-rich	Low_complexity	1	31	(0)	10815
1310	27.1	3.6	1.0	chr1	8137724	8138126	(240818296)	C	L4_C_Mam	LINE/RTE-X	(3350)	1788	1375	10997
3199	8.2	4.9	0.7	chr1	8626417	8626881	(240329541)	+	LTR19A	LTR/ERV1	1	486	(0)	11952
318	32.5	14.2	1.7	chr1	8660410	8660581	(240295841)	C	MIRc	SINE/MIR	(24)	244	48	12012
978	26.7	16.8	4.0	chr1	8660893	8661881	(240294541)	C	L2a	LINE/L2	(4)	3422	2274	12013
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
1933	13.3	0.0	1.4	chr1	9538737	9539021	(239417401)	C	AluSx	SINE/Alu	(24)	288	8	13847
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
19	9.1	0.0	5.1	chr1	11012279	11012317	(237944105)	+	(GCCCC)n	Simple_repeat	1	39	(0)	16858
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
1446	12.0	1.3	3.9	chr1	12550198	12550430	(236405992)	C	AluJr	SINE/Alu	(13)	299	73	19965
378	30.3	3.8	1.9	chr1	12596653	12596807	(236359615)	+	MIRb	SINE/MIR	63	220	(48)	20052
343	33.3	3.5	0.0	chr1	12601958	12602068	(236354354)	C	L2b	LINE/L2	(0)	3375	3261	20064
205	26.7	1.6	1.6	chr1	12602104	12602164	(236354258)	C	MamSINE1	SINE/tRNA-RTE	(228)	62	2	20065
185	27.5	12.5	1.1	chr1	12604654	12604745	(236351677)	+	MIRb	SINE/MIR	14	117	(151)	20069
336	16.0	4.8	1.0	chr1	12619303	12619402	(236337020)	C	MER5A	DNA/hAT-Charlie	(42)	147	33	20097
1012	24.2	11.2	7.8	chr1	15179173	15179501	(233776921)	+	L1ME2	LINE/L1	5594	5934	(230)	24717
1535	0.0	0.0	0.0	chr1	16514122	16514285	(232442137)	C	U1	snRNA	(1)	164	1	27677
477	33.3	4.9	0.0	chr1	16770213	16770347	(232186075)	C	MIR3	SINE/MIR	(39)	169	28	28080
269	35.0	3.7	0.0	chr1	16770373	16770475	(232185947)	+	MamRTE1	LINE/RTE-BovB	2583	2689	(1123)	28081
447	28.9	8.3	2.6	chr1	16770629	16770820	(232185602)	+	MER63A	DNA/hAT-Blackjack	7	210	(0)	28082
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
1049	15.8	0.6	0.0	chr1	16903169	16903332	(232053090)	+	AluJo	SINE/Alu	138	302	(10)	28222
265	35.5	3.2	2.2	chr1	16903379	16903562	(232052860)	+	LTR39-int	LTR/ERV1	8502	8687	(357)	28223
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
939	28.3	5.5	4.6	chr1	17128424	17128857	(231827565)	+	LTR24B	LTR/ERV1	93	530	(46)	28743
585	28.3	10.6	0.9	chr1	17649080	17649293	(231307129)	C	MIRb	SINE/MIR	(6)	262	26	29923
386	31.8	3.8	2.8	chr1	17866729	17866909	(231089513)	+	MIR3	SINE/MIR	16	198	(10)	30401
249	30.7	6.2	0.0	chr1	17874319	17874393	(231082029)	+	CR1-3_Croc	LINE/CR1	2924	3003	(602)	30416
360	26.9	10.7	2.9	chr1	17874548	17874719	(231081703)	C	MIR3	SINE/MIR	(6)	202	16	30417
11	3.8	6.5	6.1	chr1	19311939	19311969	(229644453)	+	(GGCGC)n	Simple_repeat	1	33	(0)	33409
462	33.7	4.4	6.0	chr1	20496031	20496274	(228460148)	C	L2c	LINE/L2	(397)	3022	2783	35902
2471	14.1	4.0	3.8	chr1	20496471	20496897	(228459525)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	35904
1394	18.1	2.5	0.0	chr1	20978448	20978679	(227977743)	+	Tigger7	DNA/TcMar-Tigger	30	267	(2224)	36904
421	20.4	5.1	2.1	chr1	20978691	20978785	(227977637)	+	Tigger7	DNA/TcMar-Tigger	2394	2491	(0)	36905
1989	8.7	0.0	2.3	chr1	21764466	21764730	(227191692)	+	AluSg7	SINE/Alu	40	298	(11)	38605
1160	21.2	7.2	0.7	chr1	21764731	21765018	(227191404)	C	MER21B	LTR/ERVL	(570)	298	1	38606
259	27.9	1.7	2.7	chr1	22025238	22025366	(226931056)	C	MIRb	SINE/MIR	(28)	180	60	39248
649	32.0	6.4	3.9	chr1	22746069	22746611	(226209811)	C	L2b	LINE/L2	(23)	3352	2796	40835
926	22.4	7.3	0.0	chr1	22750470	22750697	(226205725)	+	MER113	DNA/hAT-Charlie	59	304	(217)	40850
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
19	24.5	0.0	1.8	chr1	23019614	23019668	(225936754)	+	(GGC)n	Simple_repeat	1	55	(0)	41476
12	15.0	3.3	0.0	chr1	23344075	23344104	(225612318)	+	(CCACCC)n	Simple_repeat	1	31	(0)	42186
220	29.1	5.5	3.7	chr1	23403929	23404035	(225552387)	+	MamRTE1	LINE/RTE-BovB	1016	1124	(2688)	42329
382	30.4	0.0	0.9	chr1	23556439	23556551	(225399871)	C	MIRb	SINE/MIR	(122)	146	35	42732
297	22.2	8.0	0.0	chr1	23556663	23556743	(225399679)	+	Charlie24	DNA/hAT-Charlie	2363	2450	(0)	42735
293	23.2	3.7	0.2	chr1	23586065	23586140	(225370282)	+	MIRb	SINE/MIR	36	122	(86)	42803
2213	8.6	0.3	1.0	chr1	23586198	23586501	(225369921)	C	AluSg	SINE/Alu	(8)	302	1	42804
16	21.7	0.0	0.0	chr1	23778331	23778362	(225178060)	+	(C)n	Simple_repeat	1	32	(0)	43345
186	36.8	2.9	0.0	chr1	23825554	23825621	(225130801)	C	L2b	LINE/L2	(24)	3351	3282	43449
1721	9.4	0.7	9.8	chr1	23825628	23825945	(225130477)	+	AluSx1	SINE/Alu	24	312	(0)	43450
218	29.2	11.1	1.0	chr1	25820184	25820280	(223136142)	C	MIR1_Amn	SINE/MIR	(94)	136	29	47892
427	16.0	2.6	0.0	chr1	26377965	26378039	(222578383)	C	AluJr	SINE/Alu	(182)	130	54	49193
243	26.7	0.0	0.0	chr1	26378049	26378108	(222578314)	C	L2a	LINE/L2	(14)	3412	3353	49194
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
18	0.0	0.0	0.0	chr1	27155281	27155300	(221801122)	+	(A)n	Simple_repeat	1	20	(0)	51052
17	4.9	0.0	0.0	chr1	27540398	27540418	(221416004)	+	(A)n	Simple_repeat	1	21	(0)	51998
258	28.6	11.8	3.8	chr1	27540529	27540712	(221415710)	C	L2c	LINE/L2	(175)	3212	3017	51999
344	20.3	0.0	0.0	chr1	28233144	28233202	(220723220)	C	L1MB5	LINE/L1	(0)	6174	6116	53606
1097	15.4	0.0	13.0	chr1	28233250	28233270	(220723152)	C	L1MB5	LINE/L1	(47)	6127	6109	53606
1571	11.7	15.6	0.4	chr1	28233271	28233526	(220722896)	C	AluJb	SINE/Alu	(10)	302	1	53607
1298	5.2	0.0	0.7	chr1	28246936	28247089	(220709333)	C	AluSx1	SINE/Alu	(29)	283	131	53645
29	3.2	0.0	0.0	chr1	28247127	28247158	(220709264)	+	(GAAA)n	Simple_repeat	1	32	(0)	53646
1790	15.1	0.0	0.3	chr1	28505413	28505711	(220450711)	C	AluSz6	SINE/Alu	(13)	299	2	54373
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
1874	7.9	10.4	0.4	chr1	28511390	28511667	(220444755)	C	AluYj4	SINE/Alu	(1)	310	2	54386
1967	11.2	0.7	1.4	chr1	28511668	28511963	(220444459)	C	AluSz	SINE/Alu	(18)	294	1	54387
1352	7.8	5.7	3.9	chr1	28513963	28514168	(220442254)	+	AluSx4	SINE/Alu	83	292	(18)	54395
2449	5.3	0.0	0.0	chr1	28514169	28514470	(220441952)	+	AluY	SINE/Alu	1	302	(9)	54396
2238	8.8	0.3	0.0	chr1	28514480	28514776	(220441646)	+	AluSp	SINE/Alu	1	298	(15)	54397
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
5357	7.6	1.2	0.3	chr1	29570240	29570924	(219385498)	C	LTR8	LTR/ERV1	(0)	691	1	56869
2344	8.0	0.7	1.7	chr1	31573640	31573940	(217382482)	+	AluY	SINE/Alu	1	298	(13)	60932
1476	12.8	7.9	0.4	chr1	32222815	32223048	(216733374)	+	AluJo	SINE/Alu	1	253	(59)	62334
1987	10.4	0.7	0.7	chr1	32612416	32612685	(216343737)	C	AluSx	SINE/Alu	(42)	270	1	63291
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
31	5.3	2.6	0.0	chr1	33433993	33434031	(215522391)	+	(GT)n	Simple_repeat	1	40	(0)	65088
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
269	33.3	3.3	4.1	chr1	36352313	36352434	(212603988)	C	MIRb	SINE/MIR	(34)	234	114	70689
198	26.6	0.0	3.0	chr1	36352664	36352729	(212603693)	+	L2c	LINE/L2	3072	3135	(252)	70690
465	27.5	16.3	0.9	chr1	36398030	36398345	(212558077)	C	L2a	LINE/L2	(1)	3425	3052	70782
15	18.2	0.0	2.6	chr1	36464660	36464698	(212491724)	+	(CCCCA)n	Simple_repeat	1	39	(0)	70934
2170	9.4	2.0	0.0	chr1	37554443	37554739	(211401683)	+	AluSz6	SINE/Alu	1	303	(9)	72993
261	26.4	3.3	0.0	chr1	37554743	37554843	(211401579)	+	L1MC5	LINE/L1	7047	7119	(2185)	72994
317	29.5	13.8	3.0	chr1	37958597	37958795	(210997627)	+	Charlie15a	DNA/hAT-Charlie	1	224	(0)	73805
2155	15.0	0.0	0.0	chr1	37959072	37959378	(210997044)	C	AluJb	SINE/Alu	(5)	307	1	73806
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
16	8.3	0.0	0.0	chr1	38859678	38859703	(210096719)	+	(CAGGC)n	Simple_repeat	1	26	(0)	75457
32	22.4	2.3	6.1	chr1	38859704	38859783	(210096639)	+	(GCC)n	Simple_repeat	28	131	(0)	75456
2179	11.0	4.0	0.0	chr1	39191881	39192172	(209764250)	+	AluSz6	SINE/Alu	1	304	(8)	76275
17	27.4	1.3	4.0	chr1	39576661	39576736	(209379686)	+	(TTTTTC)n	Simple_repeat	1	74	(0)	76951
12	17.6	5.0	2.4	chr1	39576756	39576795	(209379627)	+	(GCG)n	Simple_repeat	1	42	(0)	76952
15	17.0	9.8	1.5	chr1	39576889	39576949	(209379473)	+	(CGGCG)n	Simple_repeat	1	67	(0)	76953
440	27.4	6.3	6.7	chr1	39577002	39577120	(209379302)	C	MER20B	DNA/hAT-Charlie	(23)	760	649	76954
17	0.0	0.0	0.0	chr1	40875913	40875933	(208080489)	+	(TGC)n	Simple_repeat	1	21	(0)	79702
29	3.2	0.0	0.0	chr1	40876103	40876134	(208080288)	+	(GTTT)n	Simple_repeat	1	32	(0)	79703
516	29.5	5.5	4.4	chr1	40876191	40876442	(208079980)	+	MIR	SINE/MIR	2	256	(6)	79704
1768	17.2	0.0	5.2	chr1	40878104	40878428	(208077994)	C	AluJr	SINE/Alu	(4)	308	1	79710
214	32.1	12.5	7.5	chr1	41455627	41456027	(207500395)	+	L2c	LINE/L2	2942	3365	(10)	80838
246	2.9	0.0	0.0	chr1	41613691	41613724	(207342698)	C	L1MB7	LINE/L1	(18)	6166	6133	81082
1316	16.4	1.1	1.6	chr1	41613719	41613988	(207342434)	C	L1MB7	LINE/L1	(76)	6098	5824	81083
467	28.8	4.5	14.2	chr1	41870170	41870535	(207085887)	+	L2a	LINE/L2	3072	3423	(3)	81595
315	34.0	15.2	0.0	chr1	41935124	41935329	(207021093)	C	MIRb	SINE/MIR	(0)	268	26	81696
15	5.5	0.0	0.0	chr1	41935605	41935623	(207020799)	+	(TC)n	Simple_repeat	1	19	(0)	81697
36	3.8	7.4	0.0	chr1	41935721	41935774	(207020648)	+	(TA)n	Simple_repeat	1	58	(0)	81698
660	28.6	4.5	3.4	chr1	41954691	41954929	(207001493)	+	MIRb	SINE/MIR	27	268	(0)	81727
386	26.7	2.0	2.0	chr1	41955055	41955203	(207001219)	C	MIR	SINE/MIR	(20)	242	94	81728
31	15.9	0.0	1.7	chr1	42177757	42177814	(206778608)	+	(AC)n	Simple_repeat	1	58	(0)	82061
428	28.2	4.3	4.3	chr1	42966907	42967122	(205989300)	C	MIRc	SINE/MIR	(20)	248	33	83453
370	27.7	7.7	4.8	chr1	42967416	42967599	(205988823)	+	MIR3	SINE/MIR	3	187	(21)	83454
19	19.0	0.0	0.0	chr1	43358713	43358754	(205597668)	+	(GCCCC)n	Simple_repeat	1	42	(0)	84214
800	30.9	11.6	2.3	chr1	43878834	43879616	(205076806)	C	L2a	LINE/L2	(6)	3420	2555	85087
239	18.0	6.2	4.7	chr1	43879676	43879739	(205076683)	C	L2	LINE/L2	(818)	2601	2537	85088
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
295	29.7	0.2	0.2	chr1	44739481	44739574	(204216848)	C	MIRb	SINE/MIR	(161)	107	8	86611
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
2514	6.2	0.3	0.3	chr1	45500583	45500887	(203455535)	+	AluSq2	SINE/Alu	1	305	(8)	88163
2667	22.5	1.1	0.0	chr1	48852920	48853440	(200102982)	+	MLT1F	LTR/ERVL-MaLR	8	534	(14)	94140
207	28.9	0.0	0.0	chr1	48878402	48878453	(200077969)	+	MIRc	SINE/MIR	69	120	(148)	94180
376	28.4	6.9	3.6	chr1	48878575	48878742	(200077680)	+	L2b	LINE/L2	3194	3367	(8)	94181
1642	19.7	3.9	0.3	chr1	48931509	48931808	(200024614)	C	AluJb	SINE/Alu	(1)	311	1	94299
446	23.6	12.0	8.6	chr1	48931809	48931874	(200024548)	+	L2a	LINE/L2	3231	3283	(143)	94298
383	28.1	12.6	3.0	chr1	49102690	49102854	(199853568)	C	MIRc	SINE/MIR	(76)	192	10	94593
14	13.1	0.0	0.0	chr1	50960185	50960210	(197996212)	+	(CGAG)n	Simple_repeat	1	26	(0)	97705
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
422	20.2	13.9	3.1	chr1	51261241	51261368	(197695054)	+	Charlie4	DNA/hAT-Charlie	1818	1961	(0)	98314
859	8.7	0.0	0.0	chr1	51261561	51261664	(197694758)	C	AluSx3	SINE/Alu	(33)	278	175	98315
2614	21.6	3.5	9.0	chr1	51558296	51558840	(197397582)	+	LTR8	LTR/ERV1	160	691	(0)	98942
317	33.6	2.7	0.0	chr1	51567603	51567712	(197388710)	+	MIRb	SINE/MIR	102	214	(54)	98964
866	23.6	7.5	3.4	chr1	51567932	51568198	(197388224)	C	LTR33	LTR/ERVL	(0)	515	237	98965
644	29.0	9.1	0.0	chr1	51569852	51570051	(197386371)	C	MIRb	SINE/MIR	(45)	223	4	98969
280	26.2	8.4	12.3	chr1	51660912	51661068	(197295354)	+	MIRc	SINE/MIR	29	181	(87)	99208
1174	10.8	0.0	0.6	chr1	51898179	51898335	(197058087)	+	AluSc	SINE/Alu	135	290	(19)	99673
227	35.3	6.9	3.5	chr1	51898409	51898768	(197057654)	C	L2c	LINE/L2	(271)	3116	2744	99660
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
288	27.5	4.8	9.8	chr1	52698589	52698711	(196257711)	C	L2c	LINE/L2	(2)	3373	3242	101496
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
810	23.3	4.6	3.3	chr1	55310484	55310696	(193645726)	+	MIRb	SINE/MIR	47	262	(6)	106839
264	30.0	2.0	0.0	chr1	55310859	55310958	(193645464)	+	L2c	LINE/L2	2540	2641	(778)	106840
340	32.7	8.9	1.0	chr1	55311031	55311201	(193645221)	C	MIRb	SINE/MIR	(63)	205	27	106841
482	31.8	9.3	6.5	chr1	55311495	55311686	(193644736)	+	L2c	LINE/L2	2604	2822	(597)	106840
390	29.2	4.2	5.6	chr1	55429545	55429719	(193526703)	+	MIRc	SINE/MIR	3	179	(89)	107099
281	31.7	8.4	7.9	chr1	55718664	55718865	(193237557)	C	L2c	LINE/L2	(174)	3213	3011	107623
17765	16.4	7.7	1.4	chr1	55779896	55783183	(193173239)	C	ERVL-int	LTR/ERVL	(0)	5757	2244	107702
1061	28.2	6.3	0.7	chr1	56301555	56301920	(192654502)	C	L1ME4a	LINE/L1	(288)	5954	5567	108566
272	29.9	5.6	1.5	chr1	56301918	56302053	(192654369)	C	Plat_L3	LINE/CR1	(308)	3278	3137	108567
342	23.4	1.1	5.0	chr1	57468857	57468955	(191487467)	C	L2c	LINE/L2	(0)	3387	3293	110876
348	26.0	12.1	2.9	chr1	57469102	57469294	(191487128)	+	MIR	SINE/MIR	8	235	(33)	110877
375	35.6	11.1	2.9	chr1	57843985	57844363	(191112059)	+	L2c	LINE/L2	2974	3387	(0)	111626
549	30.7	0.6	1.1	chr1	58592451	58592628	(190363794)	C	MIR	SINE/MIR	(71)	191	15	113148
12	15.5	3.5	0.0	chr1	58592666	58592694	(190363728)	+	(TGCC)n	Simple_repeat	1	30	(0)	113149
989	32.6	11.1	2.5	chr1	58628239	58629205	(190327217)	C	L2b	LINE/L2	(71)	3316	2232	113216
184	35.0	5.7	1.0	chr1	58727719	58727819	(190228603)	+	MamRTE1	LINE/RTE-BovB	3157	3262	(550)	113398
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
16	0.0	0.0	0.0	chr1	58909364	58909380	(190047042)	+	(T)n	Simple_repeat	1	17	(0)	113796
1662	17.8	1.7	2.0	chr1	59025072	59025363	(189931059)	+	AluJo	SINE/Alu	3	293	(19)	114027
316	30.8	2.8	2.1	chr1	59043746	59043912	(189912510)	+	MIRb	SINE/MIR	26	190	(78)	114066
441	27.4	9.8	9.4	chr1	59128137	59128422	(189828000)	C	MLT1J	LTR/ERVL-MaLR	(211)	301	15	114254
474	31.9	4.7	0.0	chr1	59128426	59128621	(189827801)	C	MIRb	SINE/MIR	(55)	213	2	114255
350	26.9	11.3	0.0	chr1	59128622	59128745	(189827677)	+	MIRb	SINE/MIR	75	215	(53)	114256
322	33.1	5.3	12.5	chr1	59143375	59143470	(189812952)	C	L2c	LINE/L2	(9)	3378	3285	114293
731	29.4	8.8	0.4	chr1	59143471	59143709	(189812713)	C	MIR	SINE/MIR	(0)	262	2	114294
857	27.9	2.4	2.0	chr1	59483968	59484216	(189472206)	C	MIR	SINE/MIR	(1)	261	12	114947
1304	12.7	15.7	3.7	chr1	60132803	60133047	(188823375)	C	AluJr4	SINE/Alu	(16)	296	17	116050
329	25.5	15.7	5.6	chr1	64039838	64039945	(184916477)	+	MER131	DNA?	23	143	(72)	123184
200	36.2	5.5	6.2	chr1	64133095	64133350	(184823072)	C	L2c	LINE/L2	(224)	3163	2910	123379
671	24.1	10.6	4.0	chr1	64516893	64517128	(184439294)	+	MIRb	SINE/MIR	14	268	(0)	124031
254	13.5	0.0	0.0	chr1	64517173	64517209	(184439213)	C	U2	snRNA	(151)	37	1	124032
855	28.0	4.7	10.0	chr1	64517213	64517621	(184438801)	C	L2a	LINE/L2	(14)	3412	3027	124033
185	33.3	5.9	8.6	chr1	66617703	66617807	(182338615)	C	L2a	LINE/L2	(4)	3383	3282	127506
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
54	1.9	0.0	0.0	chr1	67883110	67883162	(181073260)	+	(CCAT)n	Simple_repeat	1	53	(0)	129757
358	30.0	4.0	0.0	chr1	67883175	67883294	(181073128)	C	L2a	LINE/L2	(4)	3422	3298	129758
10869	10.9	4.0	1.1	chr1	67969696	67973220	(180983202)	C	L1MA3	LINE/L1	(780)	6944	2154	129914
4378	10.5	0.6	1.1	chr1	68384988	68385624	(180570798)	+	MER41B	LTR/ERV1	1	634	(0)	130578
1202	11.6	0.5	3.1	chr1	69911348	69911542	(179044880)	C	L1PA15	LINE/L1	(557)	5608	5419	132619
285	25.3	0.0	2.5	chr1	69911568	69911648	(179044774)	C	MLT1L	LTR/ERVL-MaLR	(336)	274	196	132621
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
768	16.2	0.8	1.4	chr1	70504252	70504392	(178452030)	C	FLAM_C	SINE/Alu	(82)	220	5	133544
261	29.1	11.9	7.2	chr1	70504430	70504581	(178451841)	C	MIRb	SINE/MIR	(67)	201	42	133545
265	23.2	11.3	3.4	chr1	74653268	74653356	(174303066)	C	L2a	LINE/L2	(50)	3376	3280	138950
19	21.2	0.0	0.0	chr1	74653362	74653405	(174303017)	+	(TGTG)n	Simple_repeat	1	44	(0)	138951
644	25.1	1.8	0.0	chr1	74733574	74733736	(174222686)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	139079
212	32.1	8.6	11.5	chr1	76238458	76238805	(172717617)	C	L2c	LINE/L2	(10)	3377	3041	141146
8666	22.0	3.3	3.7	chr1	76742107	76746307	(172210115)	C	L1MB1	LINE/L1	(2120)	5439	1596	141861
557	28.8	4.0	1.6	chr1	76746314	76746557	(172209865)	C	MIR	SINE/MIR	(11)	251	2	141867
322	20.6	1.6	0.0	chr1	77322482	77322544	(171633878)	+	Charlie23a	DNA/hAT-Charlie	228	291	(48)	142675
493	33.9	3.9	0.6	chr1	77322586	77322757	(171633665)	C	MIRc	SINE/MIR	(89)	179	2	142676
336	22.1	0.0	0.0	chr1	77473801	77473868	(171482554)	+	MIRb	SINE/MIR	187	254	(14)	142932
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
369	23.4	9.2	6.0	chr1	78101376	78101575	(170854847)	+	MER112	DNA/hAT-Charlie	55	261	(0)	144093
390	18.3	1.2	0.0	chr1	78146507	78146588	(170809834)	C	Helitron3Na_Mam	RC/Helitron	(167)	319	237	144178
265	30.5	0.0	0.0	chr1	78146648	78146729	(170809693)	C	Helitron3Na_Mam	RC/Helitron	(238)	248	167	144179
1605	25.1	8.3	4.1	chr1	78171828	78172334	(170784088)	C	LTR33C	LTR/ERVL	(96)	533	4	144211
320	33.7	3.4	3.9	chr1	78172335	78172491	(170783931)	+	L2c	LINE/L2	2563	2724	(695)	144212
2487	16.4	2.4	0.2	chr1	78172492	78172938	(170783484)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	144213
2051	17.5	3.4	2.2	chr1	78691877	78692279	(170264143)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	144907
476	33.6	3.9	3.5	chr1	78692280	78692322	(170264100)	+	MIRb	SINE/MIR	207	253	(15)	144906
24	14.1	1.7	4.9	chr1	78692430	78692489	(170263933)	+	(ACAA)n	Simple_repeat	1	61	(0)	144908
305	31.5	5.8	8.6	chr1	78715488	78715705	(170240717)	+	L2a	LINE/L2	3166	3426	(0)	144933
228	31.8	3.6	2.7	chr1	78831944	78832053	(170124369)	+	MLT1L	LTR/ERVL-MaLR	205	315	(295)	145096
423	35.8	14.3	2.6	chr1	78833235	78833709	(170122713)	+	L2	LINE/L2	646	1201	(2218)	145097
689	35.6	5.0	3.2	chr1	78833791	78834423	(170121999)	+	L2	LINE/L2	1828	2472	(947)	145097
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
470	34.3	3.4	3.4	chr1	83996807	83997044	(164959378)	C	MamSINE1	SINE/tRNA-RTE	(0)	290	53	151926
558	26.4	11.6	1.5	chr1	84103160	84103405	(164853017)	+	MLT1G	LTR/ERVL-MaLR	1	284	(307)	152069
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
1727	16.7	0.4	2.4	chr1	84155994	84156280	(164800142)	C	AluJo	SINE/Alu	(17)	295	15	152145
379	33.9	7.0	7.5	chr1	84156281	84156472	(164799950)	C	MamGypLTR3a	LTR/Gypsy	(228)	666	481	152144
576	35.1	5.4	6.8	chr1	84156616	84156951	(164799471)	+	MER102b	DNA/hAT-Charlie	1	331	(10)	152146
216	26.4	1.4	5.3	chr1	89906947	89907022	(159049400)	C	MER5A	DNA/hAT-Charlie	(92)	97	25	160523
30	9.7	0.0	0.0	chr1	89909014	89909057	(159047365)	+	(GT)n	Simple_repeat	1	44	(0)	160527
2738	24.1	8.0	0.9	chr1	90403123	90403812	(158552610)	+	Zaphod	DNA/hAT-Tip100	1	741	(3290)	161268
486	28.4	5.1	4.5	chr1	92935057	92935211	(156021211)	C	MIR3	SINE/MIR	(49)	159	4	165376
557	16.2	2.6	0.0	chr1	92940610	92940720	(156015702)	C	Charlie2b	DNA/hAT-Charlie	(9)	2773	2660	165386
1628	14.6	5.6	0.0	chr1	92940721	92941177	(156015245)	C	L1MD	LINE/L1	(664)	5578	5088	165387
317	32.5	8.4	0.6	chr1	93664668	93664831	(155291591)	+	MamRTE1	LINE/RTE-BovB	2962	3139	(673)	166643
2271	11.5	0.3	0.6	chr1	93669765	93670097	(155286325)	+	L1PB1	LINE/L1	5820	6151	(0)	166651
17	7.8	0.0	0.0	chr1	93738622	93738648	(155217774)	+	(AGGGC)n	Simple_repeat	1	27	(0)	166770
257	29.8	5.3	4.6	chr1	93754413	93754542	(155201880)	C	MIRc	SINE/MIR	(9)	259	129	166794
7360	12.1	4.0	1.3	chr1	93754556	93755726	(155200696)	+	Tigger3b	DNA/TcMar-Tigger	27	1230	(1)	166795
777	27.8	10.7	1.2	chr1	93779287	93779614	(155176808)	C	L2a	LINE/L2	(0)	3426	3064	166830
7434	31.6	4.5	4.9	chr1	93797519	93800291	(155156131)	C	ERV24B_Prim-int	LTR/ERV1	(2124)	5489	2735	166849
2881	16.4	0.2	0.2	chr1	93804329	93804773	(155151649)	C	MER44B	DNA/TcMar-Tigger	(105)	445	1	166856
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
29	0.0	0.0	0.0	chr1	93847897	93847923	(155108499)	+	(GCG)n	Simple_repeat	1	27	(0)	166926
1330	26.7	5.2	4.0	chr1	94270361	94270887	(154685535)	+	ERV3-16A3_I-int	LTR/ERVL	3094	3627	(1599)	167537
2285	21.2	2.5	6.2	chr1	94270888	94271439	(154684983)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	30	167538
200	24.6	10.4	5.5	chr1	94325625	94325697	(154630725)	+	Tigger19b	DNA/TcMar-Tigger	474	550	(0)	167626
444	20.2	14.2	9.2	chr1	94854705	94854875	(154101547)	+	MER20	DNA/hAT-Charlie	1	154	(65)	168415
30	0.0	0.0	0.0	chr1	94854876	94854903	(154101519)	+	(CAGCCC)n	Simple_repeat	1	28	(0)	168416
444	20.2	14.2	9.2	chr1	94854904	94854938	(154101484)	+	MER20	DNA/hAT-Charlie	155	218	(1)	168415
1321	35.3	3.6	5.2	chr1	96362346	96363160	(152593262)	C	L2a	LINE/L2	(0)	3375	2548	170545
260	40.0	1.6	0.8	chr1	96370815	96370940	(152585482)	+	L3b	LINE/CR1	5054	5180	(52)	170561
2578	6.3	0.0	0.3	chr1	96371090	96371391	(152585031)	C	AluY	SINE/Alu	(10)	301	1	170562
721	30.5	12.8	0.9	chr1	96416048	96416378	(152540044)	C	MLT1J2	LTR/ERVL-MaLR	(6)	442	67	170627
290	36.5	10.1	3.4	chr1	97094263	97094815	(151861607)	C	L2	LINE/L2	(569)	2850	2257	171589
731	28.9	6.3	6.9	chr1	97943436	97943914	(151012508)	+	MLT1H2	LTR/ERVL-MaLR	3	478	(11)	172731
16	8.6	7.5	2.3	chr1	98048583	98048622	(150907800)	+	(CCTCCAC)n	Simple_repeat	1	43	(0)	172871
33	0.0	0.0	0.0	chr1	98053103	98053138	(150903284)	+	(TG)n	Simple_repeat	1	36	(0)	172873
49	5.1	0.0	0.0	chr1	98053138	98053198	(150903224)	+	(GA)n	Simple_repeat	1	61	(0)	172874
302	35.6	13.0	1.2	chr1	98086713	98086962	(150869460)	+	L2b	LINE/L2	3088	3371	(4)	172922
17	0.0	0.0	0.0	chr1	98920457	98920475	(150035947)	+	(A)n	Simple_repeat	1	19	(0)	174109
268	41.3	5.6	3.2	chr1	100596676	100597125	(148359297)	+	L2c	LINE/L2	2677	3126	(261)	176807
1177	29.2	7.0	1.9	chr1	100597153	100597575	(148358847)	+	MLT1J2	LTR/ERVL-MaLR	3	448	(0)	176808
608	32.5	8.2	4.8	chr1	100597639	100598191	(148358231)	C	L2a	LINE/L2	(27)	3399	2826	176809
25226	6.6	0.7	0.4	chr1	100598239	100604384	(148352038)	C	L1PA5	LINE/L1	(0)	6154	6	176810
13	23.6	1.9	3.7	chr1	108200192	108200244	(140756178)	+	G-rich	Low_complexity	1	54	(0)	186508
15	5.6	0.0	0.0	chr1	108591289	108591307	(140365115)	+	(TG)n	Simple_repeat	1	19	(0)	186967
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
32	3.2	0.0	0.0	chr1	109197689	109197720	(139758702)	+	(GT)n	Simple_repeat	1	32	(0)	188211
12	20.7	0.0	2.9	chr1	109628601	109628635	(139327787)	+	(CTCAC)n	Simple_repeat	1	35	(0)	188868
203	34.0	4.7	1.4	chr1	110055785	110055927	(138900495)	C	MIR3	SINE/MIR	(16)	192	45	189481
1523	26.5	5.8	1.5	chr1	111553082	111553531	(137402891)	+	LTR40a	LTR/ERVL	1	519	(0)	191693
2568	6.3	0.0	0.0	chr1	111564513	111564811	(137391611)	C	AluY	SINE/Alu	(12)	299	1	191716
798	27.6	11.8	5.0	chr1	111564852	111565270	(137391152)	C	L2a	LINE/L2	(65)	3361	2911	191714
398	32.2	5.9	3.1	chr1	111565303	111565543	(137390879)	C	L2c	LINE/L2	(1)	3374	3152	191717
2285	11.1	1.6	0.3	chr1	112393926	112394232	(136562190)	+	AluSx1	SINE/Alu	2	312	(0)	193027
211	12.5	0.0	0.0	chr1	112394467	112394498	(136561924)	C	L2a	LINE/L2	(16)	3410	3379	193028
225	29.4	0.0	0.0	chr1	112544078	112544128	(136412294)	+	L2b	LINE/L2	3316	3366	(9)	193280
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
13	23.4	6.0	0.0	chr1	114511170	114511219	(134445203)	+	(GAGC)n	Simple_repeat	1	53	(0)	196725
18	14.9	2.6	2.5	chr1	114511211	114511249	(134445173)	+	(GC)n	Simple_repeat	1	40	(0)	196726
5798	11.7	3.7	0.1	chr1	115063185	115064064	(133892358)	+	L1PA16	LINE/L1	5254	6166	(0)	197637
2432	23.3	8.8	4.4	chr1	115160308	115161067	(133795355)	C	L1ME3A	LINE/L1	(20)	6153	5355	197777
1698	23.1	7.1	0.8	chr1	115161068	115161447	(133794975)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	3	197778
332	31.7	9.4	1.1	chr1	115190033	115190217	(133766205)	+	MIRc	SINE/MIR	59	260	(8)	197819
865	30.6	3.8	4.7	chr1	115251829	115252280	(133704142)	C	LTR79	LTR/ERVL	(60)	467	20	197910
14	25.0	2.1	0.0	chr1	115497058	115497104	(133459318)	+	(CCCTCT)n	Simple_repeat	1	48	(0)	198272
293	21.4	17.6	0.0	chr1	115497332	115497420	(133459002)	C	MER77B	LTR/ERVL	(592)	108	1	198273
974	24.5	10.8	1.8	chr1	117826893	117827272	(131129150)	+	LTR16	LTR/ERVL	26	568	(0)	201846
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
631	21.4	3.6	3.0	chr1	144523858	144524021	(104432401)	C	U1	snRNA	(0)	165	1	209540
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1490	0.6	0.0	0.0	chr1	144560666	144560829	(104395593)	C	U1	snRNA	(1)	164	1	209628
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
18	14.2	0.0	6.5	chr1	145996795	145996840	(102959582)	+	GA-rich	Low_complexity	1	46	(0)	211892
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
666	0.0	0.0	0.0	chr1	146037061	146037132	(102919290)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	211991
674	0.0	0.0	0.0	chr1	146039401	146039474	(102916948)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	211996
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
12	9.7	0.0	0.0	chr1	149811638	149811659	(99144763)	+	(CCTC)n	Simple_repeat	1	22	(0)	217774
18	7.6	0.0	0.0	chr1	149850346	149850373	(99106049)	+	(GGAG)n	Simple_repeat	1	28	(0)	217852
248	32.8	0.0	0.0	chr1	149899324	149899384	(99057038)	+	MIR3	SINE/MIR	117	177	(31)	217964
2408	9.7	0.3	0.0	chr1	149939648	149939957	(99016465)	+	AluSx1	SINE/Alu	1	311	(1)	218016
323	34.5	5.0	2.8	chr1	149986302	149986477	(98969945)	C	Tigger19a	DNA/TcMar-Tigger	(43)	280	101	218099
952	28.2	5.5	7.2	chr1	150604929	150605065	(98351357)	C	LTR78	LTR/ERV1	(904)	400	269	219439
2224	9.7	0.0	2.7	chr1	150605066	150605364	(98351058)	C	AluSq	SINE/Alu	(22)	291	1	219440
15	12.9	5.0	7.9	chr1	150926373	150926432	(98029990)	+	(CTTCCC)n	Simple_repeat	1	63	(0)	220139
17	25.7	0.0	0.0	chr1	151282307	151282352	(97674070)	+	(GCG)n	Simple_repeat	1	46	(0)	220903
15	28.9	2.7	2.6	chr1	154220842	154220916	(94735506)	+	G-rich	Low_complexity	1	77	(0)	225710
2510	7.5	0.0	0.0	chr1	155224460	155224765	(93731657)	+	AluY	SINE/Alu	1	306	(5)	227570
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
2385	11.1	0.0	0.0	chr1	156124280	156124586	(92831836)	C	AluSg	SINE/Alu	(3)	307	1	229536
1988	16.8	0.0	1.0	chr1	156616805	156617114	(92339308)	+	AluJb	SINE/Alu	1	307	(5)	230454
31	23.7	0.0	0.0	chr1	156660382	156660448	(92295974)	+	(GT)n	Simple_repeat	1	67	(0)	230532
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
215	27.3	3.0	1.5	chr1	156752099	156752165	(92204257)	C	L2c	LINE/L2	(1)	3374	3307	230675
492	32.0	6.6	6.8	chr1	158101992	158102357	(90854065)	+	L2c	LINE/L2	3023	3387	(0)	232670
23	21.7	2.5	3.7	chr1	160262403	160262482	(88693940)	+	(CCACCG)n	Simple_repeat	1	82	(0)	235489
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
19	8.3	0.0	0.0	chr1	161956287	161956312	(87000110)	+	(CA)n	Simple_repeat	1	26	(0)	238379
183	22.6	8.6	0.0	chr1	162632591	162632643	(86323779)	C	X9_LINE	LINE/L1	(61)	875	818	239513
383	29.6	11.8	2.6	chr1	163307768	163307958	(85648464)	C	MIRb	SINE/MIR	(8)	260	50	240556
2698	3.0	0.0	0.3	chr1	164611238	164611537	(84344885)	C	AluY	SINE/Alu	(12)	299	1	242400
800	24.3	2.3	0.0	chr1	164767205	164767377	(84189045)	C	MER45A	DNA/hAT-Tip100	(0)	178	2	242610
16	5.3	0.0	0.0	chr1	164767650	164767669	(84188753)	+	(A)n	Simple_repeat	1	20	(0)	242611
790	3.3	1.1	0.0	chr1	168229238	168229329	(80727093)	C	AluYc	SINE/Alu	(29)	270	178	248049
919	19.6	0.0	1.7	chr1	168469971	168470146	(80486276)	+	MIR	SINE/MIR	90	262	(0)	248452
458	30.6	8.0	2.0	chr1	168483725	168483924	(80472498)	+	LTR89	LTR/ERVL?	266	478	(401)	248474
346	25.5	18.5	3.7	chr1	168623497	168623648	(80332774)	+	MIRc	SINE/MIR	6	175	(55)	248661
1338	24.1	5.8	5.8	chr1	168654177	168654673	(80301749)	C	MLT1D	LTR/ERVL-MaLR	(8)	497	1	248717
299	27.7	0.0	9.0	chr1	168709855	168709965	(80246457)	+	MIRc	SINE/MIR	168	268	(0)	248788
267	30.9	5.5	5.5	chr1	168709988	168710123	(80246299)	C	L2c	LINE/L2	(0)	3387	3214	248789
14	7.8	3.7	0.0	chr1	169113663	169113689	(79842733)	+	(TCCCT)n	Simple_repeat	1	28	(0)	249457
15	18.1	0.0	3.0	chr1	170531952	170531984	(78424438)	+	GA-rich	Low_complexity	1	33	(0)	251433
234	25.6	1.1	0.7	chr1	170676637	170676703	(78279719)	C	MIRb	SINE/MIR	(46)	184	117	251618
194	33.5	9.0	3.8	chr1	170676802	170677012	(78279410)	+	MIRc	SINE/MIR	39	261	(7)	251619
435	32.3	7.7	2.0	chr1	170807694	170807889	(78148533)	C	LTR78	LTR/ERV1	(823)	481	274	251803
307	30.2	7.2	2.5	chr1	170910208	170910326	(78046096)	C	MIR3	SINE/MIR	(48)	160	36	251963
930	19.6	12.6	0.0	chr1	171438301	171438527	(77517895)	C	MER58B	DNA/hAT-Charlie	(55)	286	27	252702
940	20.7	3.2	0.0	chr1	171438550	171438728	(77517694)	+	MER5A	DNA/hAT-Charlie	5	189	(0)	252706
223	28.9	11.6	6.6	chr1	172254961	172255082	(76701340)	C	MIRc	SINE/MIR	(115)	153	25	254004
4272	19.7	10.3	0.8	chr1	172356790	172357809	(76598613)	+	L1MC4a	LINE/L1	6758	7873	(9)	254129
43	0.0	0.0	0.0	chr1	172359126	172359162	(76597260)	+	(AC)n	Simple_repeat	1	37	(0)	254131
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
394	30.9	1.9	5.9	chr1	172990438	172990796	(75965626)	C	L1M5	LINE/L1	(1772)	4374	4030	254970
2794	17.1	3.5	0.4	chr1	173269308	173269812	(75686610)	C	Tigger7	DNA/TcMar-Tigger	(1970)	521	1	255361
45	26.4	3.2	3.1	chr1	173330208	173330393	(75626029)	+	(TAATAT)n	Simple_repeat	1	192	(0)	255441
280	29.2	12.4	0.0	chr1	173330400	173330519	(75625903)	C	MIRc	SINE/MIR	(61)	207	68	255442
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
274	16.7	2.9	7.0	chr1	180151839	180151909	(68804513)	+	MIR	SINE/MIR	152	219	(43)	265966
764	22.9	6.7	0.0	chr1	181073462	181073614	(67882808)	C	FRAM	SINE/Alu	(10)	166	3	267422
325	34.1	11.9	0.6	chr1	181073704	181073874	(67882548)	C	MIR3	SINE/MIR	(14)	194	2	267423
255	36.7	1.3	7.5	chr1	181073884	181073978	(67882444)	C	L2b	LINE/L2	(7)	3368	3284	267424
39	0.0	0.0	0.0	chr1	181096624	181096659	(67859763)	+	(T)n	Simple_repeat	1	36	(0)	267463
16	19.3	0.0	2.3	chr1	181100477	181100519	(67855903)	+	(CCATACC)n	Simple_repeat	1	43	(0)	267467
811	26.5	27.9	3.9	chr1	181100805	181101351	(67855071)	C	L2c	LINE/L2	(5)	3382	2694	267468
189	24.6	4.2	8.0	chr1	181141525	181141599	(67814823)	C	L2b	LINE/L2	(20)	3355	3284	267540
11	19.1	2.1	6.2	chr1	182615102	182615148	(66341274)	+	(CGGCCG)n	Simple_repeat	1	48	(0)	269753
18	23.7	0.0	6.8	chr1	183472319	183472363	(65484059)	+	(CCCTCT)n	Simple_repeat	1	70	(0)	271188
17	18.8	0.0	0.0	chr1	183472364	183472394	(65484028)	+	(C)n	Simple_repeat	1	31	(0)	271189
1257	19.2	9.1	0.4	chr1	184056944	184057183	(64899239)	+	MLT1F2	LTR/ERVL-MaLR	1	263	(297)	272021
1410	27.6	5.2	7.1	chr1	184160371	184160917	(64795505)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	1	272195
30	5.0	2.3	2.3	chr1	184867171	184867213	(64089209)	+	(CA)n	Simple_repeat	1	44	(0)	273357
984	34.1	13.0	2.6	chr1	186442236	186442955	(62513467)	C	L2	LINE/L2	(1266)	2153	1334	275594
223	22.1	8.3	4.9	chr1	186974761	186974841	(61981581)	C	MIR1_Amn	SINE/MIR	(49)	181	98	276386
5289	16.1	1.2	1.4	chr1	187690882	187691802	(61264620)	+	L1MC1	LINE/L1	5358	6276	(57)	277370
3215	17.1	0.7	0.0	chr1	188386178	188386716	(60569706)	+	LTR38A1	LTR/ERV1	1	543	(0)	278228
315	20.8	0.0	6.5	chr1	188706755	188706831	(60249591)	C	AluJo	SINE/Alu	(19)	293	222	278638
2205	20.0	1.4	0.9	chr1	188706877	188707295	(60249127)	+	Tigger7	DNA/TcMar-Tigger	101	521	(1970)	278639
2854	20.9	5.3	4.7	chr1	188888423	188889119	(60067303)	+	MER44D	DNA/TcMar-Tigger	2	702	(3)	278885
2610	25.9	1.6	0.6	chr1	189606662	189607148	(59349274)	+	MER63C	DNA/hAT-Blackjack	6	497	(433)	279787
37	0.0	0.0	0.0	chr1	189607149	189607180	(59349242)	+	(CA)n	Simple_repeat	1	32	(0)	279788
2610	25.9	1.6	0.6	chr1	189607181	189607349	(59349073)	+	MER63C	DNA/hAT-Blackjack	498	669	(261)	279787
966	14.2	14.2	0.0	chr1	189607440	189607650	(59348772)	+	MER63D	DNA/hAT-Blackjack	816	1061	(0)	279789
1376	9.4	18.0	0.0	chr1	192559496	192559728	(56396694)	+	Tigger1	DNA/TcMar-Tigger	1497	1780	(638)	283551
2857	17.6	1.9	0.0	chr1	192559727	192560232	(56396190)	C	Tigger1	DNA/TcMar-Tigger	(1902)	516	1	283550
13	13.7	0.0	0.0	chr1	193060087	193060111	(55896311)	+	(CTC)n	Simple_repeat	1	25	(0)	284288
527	25.5	3.7	3.7	chr1	193104812	193105002	(55851420)	+	MER53	DNA/hAT	1	191	(2)	284361
2818	16.3	1.6	1.0	chr1	193408837	193409327	(55547095)	C	LTR42	LTR/ERVL	(1)	494	1	284830
4172	19.6	1.9	2.3	chr1	196181086	196181880	(52774542)	+	MER54B	LTR/ERVL	2	793	(0)	288328
673	27.5	4.1	3.7	chr1	198118149	198118393	(50838029)	+	MLT1K	LTR/ERVL-MaLR	335	580	(15)	290797
471	31.8	15.9	3.0	chr1	198118412	198118939	(50837483)	+	L2	LINE/L2	1903	2511	(908)	290795
1389	26.8	11.4	0.9	chr1	198154833	198155590	(50800832)	+	L2a	LINE/L2	2557	3426	(0)	290863
2119	11.7	0.0	2.9	chr1	198155618	198155933	(50800489)	C	AluSx1	SINE/Alu	(5)	307	1	290864
2767	20.2	9.2	2.7	chr1	198219735	198220410	(50736012)	C	L1MC4	LINE/L1	(554)	7488	6764	290937
406	27.6	10.5	0.2	chr1	198443677	198443841	(50512581)	+	MIR	SINE/MIR	13	196	(12)	291215
9082	18.4	9.1	1.4	chr1	198493224	198495171	(50461251)	C	MER52D	LTR/ERV1	(0)	2123	12	291276
272	36.7	5.1	3.2	chr1	198777012	198777166	(50179256)	C	MIRb	SINE/MIR	(26)	242	85	291667
3646	25.0	6.3	1.3	chr1	199490829	199492213	(49464209)	+	L1MCb	LINE/L1	3	1537	(5214)	292577
992	21.9	2.9	1.3	chr1	200368110	200368345	(48588077)	C	MIR	SINE/MIR	(10)	252	13	294126
672	25.1	17.9	1.2	chr1	200379687	200380021	(48576401)	+	L1ME4c	LINE/L1	307	709	(121)	294145
388	32.3	9.7	6.1	chr1	201457270	201457516	(47498906)	+	MIRb	SINE/MIR	1	257	(11)	296051
281	24.0	12.6	3.7	chr1	201463267	201463374	(47493048)	+	L2b	LINE/L2	3264	3419	(7)	296061
2163	12.5	0.0	0.3	chr1	201463420	201463730	(47492692)	C	AluSx	SINE/Alu	(2)	310	1	296066
24	20.0	4.2	5.0	chr1	201539287	201539381	(47417041)	+	(GCGCG)n	Simple_repeat	1	99	(0)	296223
1789	14.4	0.3	4.9	chr1	201561993	201562319	(47394103)	C	AluJo	SINE/Alu	(0)	312	1	296267
253	32.7	0.0	1.9	chr1	201603121	201603223	(47353199)	+	Plat_L3	LINE/CR1	3311	3411	(175)	296342
391	34.4	3.5	1.2	chr1	201624972	201625273	(47331149)	+	Plat_L3	LINE/CR1	3030	3283	(303)	296388
432	30.8	7.1	1.7	chr1	201625275	201625446	(47330976)	+	L3	LINE/CR1	3798	3979	(120)	296389
235	19.6	3.5	1.8	chr1	201792096	201792152	(47164270)	+	MER121	DNA/hAT?	262	319	(82)	296636
46	21.2	3.1	4.8	chr1	201955119	201955207	(47001215)	+	A-rich	Low_complexity	71	157	(0)	296924
327	30.7	5.2	4.7	chr1	202292107	202292277	(46664145)	C	L2b	LINE/L2	(466)	2953	2782	297631
295	29.2	0.0	0.0	chr1	202292274	202292338	(46664084)	+	MIR	SINE/MIR	9	73	(189)	297633
407	28.4	5.2	2.1	chr1	202292342	202292528	(46663894)	C	MLT1J2	LTR/ERVL-MaLR	(3)	445	253	297634
593	29.7	12.1	2.5	chr1	203512462	203512865	(45443557)	C	L2a	LINE/L2	(1)	3425	2978	299737
494	27.8	2.1	7.4	chr1	203537011	203537212	(45419210)	+	MamGypLTR3a	LTR/Gypsy	791	981	(0)	299779
338	26.0	14.1	4.8	chr1	203558264	203558470	(45397952)	C	MIRb	SINE/MIR	(19)	249	6	299826
508	23.8	7.4	0.0	chr1	203558490	203558615	(45397807)	C	MLT1K	LTR/ERVL-MaLR	(21)	574	439	299827
13	25.5	0.0	0.0	chr1	203607259	203607296	(45349126)	+	A-rich	Low_complexity	1	38	(0)	299937
223	33.3	8.8	4.3	chr1	203607516	203607626	(45348796)	+	MIRb	SINE/MIR	6	124	(144)	299938
2620	5.3	0.0	0.0	chr1	203861065	203861367	(45095055)	+	AluSc8	SINE/Alu	1	303	(8)	300474
2280	14.2	6.0	3.8	chr1	204418726	204419178	(44537244)	+	MLT1C	LTR/ERVL-MaLR	1	464	(3)	301510
1828	27.0	20.7	1.4	chr1	204419179	204419732	(44536690)	+	L2c	LINE/L2	2079	2820	(599)	301508
245	27.3	3.0	1.5	chr1	204438497	204438563	(44517859)	+	MIR3	SINE/MIR	115	182	(26)	301538
15	16.4	5.9	0.0	chr1	204438894	204438927	(44517495)	+	(CA)n	Simple_repeat	1	36	(0)	301539
352	25.5	0.0	5.4	chr1	205175751	205175862	(43780560)	+	L2a	LINE/L2	3321	3426	(0)	302933
12	15.7	2.6	5.0	chr1	205294353	205294391	(43662031)	+	(CTCAGAG)n	Simple_repeat	1	40	(0)	303159
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
15	29.1	1.9	0.0	chr1	205631725	205631778	(43324644)	+	(CGG)n	Simple_repeat	1	55	(0)	303803
424	31.6	1.1	4.5	chr1	207025667	207025865	(41930557)	C	Tigger19a	DNA/TcMar-Tigger	(74)	249	58	306097
2647	4.8	0.3	0.7	chr1	207204836	207205144	(41751278)	C	AluSg7	SINE/Alu	(1)	308	1	306346
391	28.8	8.5	10.2	chr1	207205148	207205437	(41750985)	+	MLT1J2	LTR/ERVL-MaLR	228	505	(7)	306345
2679	14.1	5.1	2.2	chr1	207393349	207393722	(41562700)	+	L1MC1	LINE/L1	5494	5883	(625)	306577
3339	10.1	3.0	2.6	chr1	207393723	207394084	(41562338)	+	LTR3B_	LTR/ERVK	1	362	(137)	306578
824	35.4	10.4	2.3	chr1	208008208	208009184	(40947238)	+	L2c	LINE/L2	2276	3356	(19)	307470
425	29.9	4.3	1.5	chr1	208201648	208201783	(40754639)	C	MIRb	SINE/MIR	(23)	245	106	307765
2475	20.2	12.4	6.0	chr1	209168055	209168687	(39787735)	+	MER77B	LTR/ERVL	1	679	(21)	309251
1530	19.4	1.9	0.0	chr1	209168689	209168992	(39787430)	+	L1MB7	LINE/L1	5852	6161	(23)	309249
11	14.7	3.7	8.9	chr1	209389229	209389282	(39567140)	+	(CCATCC)n	Simple_repeat	1	56	(0)	309575
753	24.1	7.0	11.1	chr1	209567579	209567919	(39388503)	C	MLT1I	LTR/ERVL-MaLR	(39)	372	47	309850
3141	10.9	0.7	0.7	chr1	209567952	209568385	(39388037)	+	LTR47B4	LTR/ERVL	1	434	(0)	309851
443	26.4	5.2	10.3	chr1	209688721	209688944	(39267478)	+	HAL1	LINE/L1	8	219	(2288)	310045
1545	19.9	6.4	2.2	chr1	209831581	209831940	(39124482)	C	L1ME2	LINE/L1	(7)	6157	5782	310257
314	36.8	6.4	7.2	chr1	209839701	209840063	(39116359)	C	L2b	LINE/L2	(6)	3369	3010	310268
389	30.4	11.7	4.0	chr1	209840146	209840745	(39115677)	C	L2b	LINE/L2	(1007)	2412	1761	310268
11	17.3	0.0	5.6	chr1	210233996	210234031	(38722391)	+	(AATAAG)n	Simple_repeat	1	36	(0)	310826
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
274	30.2	4.5	8.9	chr1	210393685	210393942	(38562480)	C	MamSINE1	SINE/tRNA-RTE	(32)	258	13	311101
1097	32.0	6.9	5.4	chr1	210438947	210439615	(38516807)	C	ERVL-B4-int	LTR/ERVL	(4108)	1559	914	311164
16897	15.4	2.2	0.5	chr1	210596244	210598911	(38357511)	C	L1MA3	LINE/L1	(4839)	2726	12	311402
382	30.9	14.1	5.2	chr1	211037075	211037306	(37919116)	C	MIRc	SINE/MIR	(8)	260	5	312019
363	29.9	14.0	0.5	chr1	211037300	211037497	(37918925)	C	MIRc	SINE/MIR	(18)	250	22	312020
226	24.1	1.2	6.0	chr1	211639671	211639754	(37316668)	C	MamTip3	DNA/hAT-Tip100	(407)	93	14	313109
377	29.1	14.7	1.9	chr1	211640116	211640269	(37316153)	+	MIR	SINE/MIR	16	192	(70)	313110
45	2.4	0.0	0.0	chr1	211918048	211918090	(37038332)	+	(CA)n	Simple_repeat	1	43	(0)	313627
260	29.2	0.0	0.0	chr1	211918309	211918373	(37038049)	+	MIRc	SINE/MIR	61	125	(143)	313628
767	25.7	6.7	1.3	chr1	212636947	212637171	(36319251)	C	MIR	SINE/MIR	(9)	253	16	314885
950	17.4	1.1	0.0	chr1	212857841	212858012	(36098410)	+	MER41D	LTR/ERV1	384	557	(0)	315327
537	32.8	6.4	4.3	chr1	214453336	214453593	(34502829)	+	MIRb	SINE/MIR	2	265	(3)	317719
3584	24.8	2.7	4.0	chr1	214581545	214582369	(34374053)	C	BLACKJACK	DNA/hAT-Blackjack	(1985)	984	165	317928
1617	19.1	13.0	0.3	chr1	214957089	214957444	(33998978)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	318439
676	32.9	8.3	0.0	chr1	214967776	214968018	(33988404)	+	MIRb	SINE/MIR	1	265	(3)	318454
2555	28.2	9.4	3.3	chr1	214988721	214989973	(33966449)	+	L2a	LINE/L2	2086	3422	(4)	318485
412	21.4	1.2	0.0	chr1	214990677	214990760	(33965662)	+	MER5A	DNA/hAT-Charlie	34	118	(71)	318487
265	29.4	4.2	1.1	chr1	214990761	214990853	(33965569)	+	L2a	LINE/L2	524	619	(2800)	318488
18	11.2	0.0	0.0	chr1	214990872	214990901	(33965521)	+	(CAT)n	Simple_repeat	1	30	(0)	318489
13	20.6	2.6	0.0	chr1	214990919	214990957	(33965465)	+	(TATCCAT)n	Simple_repeat	1	40	(0)	318490
387	35.6	6.0	0.0	chr1	215002542	215002729	(33953693)	C	UCON26	Unknown	(77)	266	67	318512
16	15.5	0.0	0.0	chr1	215273786	215273815	(33682607)	+	(ATC)n	Simple_repeat	1	30	(0)	318893
4605	17.2	3.4	0.5	chr1	215474934	215475773	(33480649)	+	MER6	DNA/TcMar-Tigger	1	865	(0)	319125
465	32.6	6.6	12.1	chr1	215475774	215475955	(33480467)	C	L2a	LINE/L2	(168)	3258	3063	319124
227	36.6	11.0	1.6	chr1	215476091	215476279	(33480143)	+	MamRTE1	LINE/RTE-BovB	3263	3471	(341)	319123
992	18.2	2.5	4.2	chr1	215476510	215476554	(33479868)	+	L1MB2	LINE/L1	5161	5205	(935)	319126
571	27.1	5.7	2.4	chr1	218380846	218381015	(30575407)	C	MIRb	SINE/MIR	(0)	268	93	323154
16	0.0	0.0	0.0	chr1	218496625	218496642	(30459780)	+	(A)n	Simple_repeat	1	18	(0)	323349
18	10.5	0.0	0.0	chr1	218496642	218496672	(30459750)	+	(AGAGAG)n	Simple_repeat	1	31	(0)	323350
17847	16.2	5.1	1.4	chr1	219088451	219094763	(29861659)	+	L1MA4	LINE/L1	11	7719	(0)	324154
197	33.3	8.8	2.2	chr1	219302950	219303104	(29653318)	+	L2c	LINE/L2	3231	3367	(8)	324421
395	29.7	2.1	0.0	chr1	219304357	219304494	(29651928)	+	MARNA	DNA/TcMar-Mariner	427	567	(19)	324424
191	29.6	7.4	4.3	chr1	219313188	219313279	(29643143)	+	MIRb	SINE/MIR	24	118	(150)	324435
1181	23.4	12.4	1.7	chr1	219543204	219543555	(29412867)	+	MLT1E1A	LTR/ERVL-MaLR	285	679	(1)	324758
415	22.4	12.6	4.6	chr1	219699767	219699897	(29256525)	+	MIRb	SINE/MIR	86	228	(40)	325004
706	33.5	13.2	3.8	chr1	219702610	219703199	(29253223)	+	L2b	LINE/L2	2171	2832	(587)	325010
248	26.4	0.0	4.4	chr1	219792420	219792510	(29163912)	C	UCON14	DNA?	(188)	159	73	325154
15	18.9	2.3	2.2	chr1	222814877	222814920	(26141502)	+	(CCCTCTG)n	Simple_repeat	1	45	(0)	329730
1818	13.5	5.0	7.2	chr1	222821421	222821593	(26134829)	+	THE1D	LTR/ERVL-MaLR	1	177	(204)	329743
2369	10.4	0.0	1.0	chr1	222821594	222821901	(26134521)	+	AluSx1	SINE/Alu	1	305	(7)	329744
2594	19.7	7.1	0.8	chr1	222892052	222892649	(26063773)	C	MER99	DNA/hAT?	(1)	830	193	329863
46	6.5	3.1	0.0	chr1	223707237	223707300	(25249122)	+	(TC)n	Simple_repeat	1	66	(0)	331075
189	30.5	11.9	2.8	chr1	223727021	223727165	(25229257)	+	MamTip2	DNA/hAT-Tip100	67	226	(79)	331119
1369	27.4	5.9	10.2	chr1	224542843	224543606	(24412816)	+	MER21C	LTR/ERVL	3	821	(117)	332759
2060	14.1	0.0	0.0	chr1	224633159	224633457	(24322965)	C	AluSz6	SINE/Alu	(12)	300	2	332901
419	36.5	5.0	5.3	chr1	225655551	225655911	(23300511)	C	MER130	DNA	(141)	1453	1094	334309
216	26.7	3.8	12.2	chr1	225755334	225755491	(23200931)	C	MIR1_Amn	SINE/MIR	(39)	191	49	334529
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
35	27.5	4.0	1.9	chr1	228378431	228378580	(20577842)	+	(CCCCT)n	Simple_repeat	1	156	(0)	338615
1040	18.3	31.0	2.2	chr1	231395301	231395626	(17560796)	C	MER119	DNA/hAT-Charlie	(4)	579	160	343424
24	6.8	0.0	0.0	chr1	231626638	231626668	(17329754)	+	(GT)n	Simple_repeat	1	31	(0)	343832
15	0.0	0.0	0.0	chr1	231626668	231626684	(17329738)	+	(GC)n	Simple_repeat	1	17	(0)	343833
30	19.7	3.3	3.2	chr1	234544489	234544580	(14411842)	+	G-rich	Low_complexity	1	95	(0)	348058
334	30.1	4.3	2.2	chr1	234657326	234657461	(14298961)	+	MIR3	SINE/MIR	5	143	(65)	348240
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
242	33.3	0.0	0.0	chr1	234975375	234975449	(13980973)	+	LFSINE_Vert	SINE/tRNA	2	76	(383)	348765
404	30.7	8.5	7.7	chr1	235909172	235909547	(13046875)	C	L2c	LINE/L2	(3)	3384	3012	350605
526	24.2	5.6	2.1	chr1	235911101	235911284	(13045138)	+	MIRb	SINE/MIR	23	220	(42)	350608
880	14.1	0.0	0.7	chr1	235999758	235999893	(12956529)	+	MER4B	LTR/ERV1	1	135	(475)	350790
257	27.5	11.8	7.8	chr1	236794837	236794990	(12161432)	C	MIRc	SINE/MIR	(24)	244	84	352267
783	30.5	7.8	4.8	chr1	238647862	238648300	(10308122)	+	MLT1G	LTR/ERVL-MaLR	38	520	(49)	354995
1040	35.0	7.4	2.0	chr1	238653683	238654292	(10302130)	+	L4_A_Mam	LINE/RTE-X	4090	4735	(255)	355000
288	32.3	5.2	8.6	chr1	239912824	239912962	(9043460)	+	MIRc	SINE/MIR	3	136	(132)	356851
654	28.2	3.1	4.6	chr1	240194257	240194338	(8762084)	+	MIR	SINE/MIR	6	89	(173)	357302
2781	17.7	3.1	0.2	chr1	240194339	240194865	(8761557)	C	MER67A	LTR/ERV1	(0)	543	1	357303
186	29.1	0.0	5.2	chr1	240245604	240245661	(8710761)	+	L2a	LINE/L2	3360	3414	(12)	357362
5464	14.0	3.1	0.9	chr1	240306263	240308000	(8648422)	C	L1PA17	LINE/L1	(0)	6166	4389	357443
16	24.6	5.1	1.6	chr1	240338130	240338188	(8618234)	+	(TC)n	Simple_repeat	1	62	(0)	357483
1884	22.3	10.6	7.4	chr1	240738930	240739385	(8217037)	+	Kanga1a	DNA/TcMar-Tc2	301	754	(0)	358187
2986	13.2	2.6	0.2	chr1	241612469	241612960	(7343462)	+	LTR26	LTR/ERV1	1	504	(99)	359554
232	18.2	0.0	0.0	chr1	241612973	241613016	(7343406)	+	LTR26	LTR/ERV1	560	603	(0)	359554
2556	27.8	4.2	2.3	chr1	243524738	243525763	(5430659)	+	L1MEb	LINE/L1	247	1291	(5126)	362714
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
471	31.4	9.2	3.7	chr1	244092166	244092463	(4863959)	+	L4_C_Mam	LINE/RTE-X	2448	2763	(2375)	363580
808	24.4	4.2	0.5	chr1	244349509	244349714	(4606708)	C	L1MC4	LINE/L1	(362)	7680	7467	364032
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
319	25.0	7.2	4.9	chr1	245788498	245788619	(3167803)	C	MIR3	SINE/MIR	(8)	200	76	366529
478	34.3	8.0	2.0	chr1	245880750	245881044	(3075378)	+	L3	LINE/CR1	3773	4086	(13)	366655
1910	15.5	0.0	1.4	chr1	246004853	246005148	(2951274)	C	AluJb	SINE/Alu	(20)	292	1	366810
392	28.5	11.6	0.0	chr1	246005366	246005495	(2950927)	+	MIRc	SINE/MIR	18	164	(104)	366811
15	16.7	2.4	2.3	chr1	246566454	246566495	(2389927)	+	(CCGCGAG)n	Simple_repeat	1	43	(0)	367694
13	5.3	0.0	0.0	chr1	247448215	247448234	(1508188)	+	(CGG)n	Simple_repeat	1	20	(0)	369197
20	0.0	0.0	0.0	chr1	247448269	247448290	(1508132)	+	(T)n	Simple_repeat	1	22	(0)	369198
608	0.0	0.0	21.5	chr1	248873855	248873961	(82461)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	370918
13	25.1	6.9	1.3	chr10	931544	931615	(132865807)	+	(GGCGCG)n	Simple_repeat	1	77	(0)	372033
12	19.9	9.6	0.0	chr10	1048949	1049000	(132748422)	+	(CCAGCG)n	Simple_repeat	1	57	(0)	372219
2383	6.2	0.7	0.0	chr10	1055819	1056106	(132741316)	C	AluSg	SINE/Alu	(20)	290	1	372230
572	31.0	8.0	3.9	chr10	3095366	3095774	(130701648)	C	MARNA	DNA/TcMar-Mariner	(134)	452	26	374621
12	9.1	4.2	0.0	chr10	3467373	3467396	(130330026)	+	(CAA)n	Simple_repeat	1	25	(0)	375140
19	16.8	0.0	2.4	chr10	3467717	3467758	(130329664)	+	(AAC)n	Simple_repeat	1	42	(0)	375141
5702	14.2	1.6	0.3	chr10	3524658	3525868	(130271554)	+	L1PB3	LINE/L1	4927	6154	(0)	375207
272	27.1	1.2	0.0	chr10	3637102	3637186	(130160236)	C	MER53	DNA/hAT	(1)	192	107	375349
13	26.2	2.7	5.2	chr10	3785987	3786061	(130011361)	+	(CCCCTC)n	Simple_repeat	1	77	(0)	375558
23	9.7	0.0	0.0	chr10	3810498	3810530	(129986892)	+	(A)n	Simple_repeat	1	33	(0)	375590
542	35.0	14.7	3.1	chr10	3839918	3840729	(129956693)	C	L4_A_Mam	LINE/RTE-X	(437)	4553	3631	375624
25	0.0	0.0	0.0	chr10	4131822	4131848	(129665574)	+	(A)n	Simple_repeat	1	27	(0)	376097
1129	9.0	0.0	0.0	chr10	4195501	4195633	(129601789)	+	AluSx	SINE/Alu	1	133	(179)	376185
38	17.9	0.0	0.0	chr10	4195634	4195673	(129601749)	+	A-rich	Low_complexity	1	40	(0)	376186
2292	13.4	0.0	1.0	chr10	4195674	4196017	(129601405)	+	AluSz	SINE/Alu	2	312	(0)	376187
4264	22.4	5.7	4.4	chr10	4670053	4670807	(129126615)	C	L1MB7	LINE/L1	(5509)	2008	1216	376769
1673	25.1	5.2	0.7	chr10	4670813	4671253	(129126169)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	376772
1998	24.2	0.9	0.0	chr10	4671288	4671738	(129125684)	C	L1MB7	LINE/L1	(6441)	1076	622	376769
1839	26.1	3.3	1.9	chr10	4671736	4672207	(129125215)	C	L1MB7	LINE/L1	(7034)	483	5	376769
257	26.4	12.0	6.0	chr10	4771608	4771724	(129025698)	C	Arthur1B	DNA/hAT-Tip100	(1100)	125	1	376910
3107	26.8	6.2	4.6	chr10	4807778	4808331	(128989091)	C	L1M5	LINE/L1	(1839)	4307	3743	376944
19	12.0	0.0	2.6	chr10	5813435	5813472	(127983950)	+	(GGGAG)n	Simple_repeat	1	38	(0)	378339
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
420	28.8	7.8	1.7	chr10	6088443	6088672	(127708750)	C	L1MC4	LINE/L1	(4301)	2010	1766	378876
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
338	30.8	5.0	0.8	chr10	6136364	6136497	(127660925)	+	MIR3	SINE/MIR	51	190	(18)	378958
2484	3.7	0.0	0.0	chr10	6157231	6157525	(127639897)	C	AluYf1	SINE/Alu	(16)	295	1	379001
313	29.3	11.4	0.8	chr10	6239249	6239365	(127558057)	C	MIRb	SINE/MIR	(96)	172	42	379157
15	4.3	8.3	0.0	chr10	6722011	6722034	(127075388)	+	(AC)n	Simple_repeat	1	26	(0)	379964
429	31.7	0.0	6.6	chr10	6722043	6722316	(127075106)	+	CR1-16_AMi	LINE/CR1	315	552	(299)	379965
2303	23.1	4.7	10.0	chr10	6748497	6749305	(127048117)	C	MER21C	LTR/ERVL	(75)	863	9	380014
18	20.3	1.4	6.9	chr10	8054413	8054483	(125742939)	+	(CCCG)n	Simple_repeat	1	72	(0)	382057
14	20.2	0.0	0.0	chr10	8069970	8070003	(125727419)	+	A-rich	Low_complexity	1	34	(0)	382077
34	0.0	0.0	0.0	chr10	12419641	12419669	(121377753)	+	(CA)n	Simple_repeat	1	29	(0)	388901
192	29.9	7.4	1.1	chr10	13713047	13713134	(120084288)	+	MIR1_Amn	SINE/MIR	3	96	(134)	391230
303	29.4	10.0	0.0	chr10	13713222	13713347	(120084075)	C	MIRc	SINE/MIR	(118)	150	11	391231
13	10.0	0.0	0.0	chr10	13882425	13882446	(119914976)	+	(GGA)n	Simple_repeat	1	22	(0)	391549
2815	20.2	3.5	0.0	chr10	13984372	13984945	(119812477)	C	L1MB2	LINE/L1	(3)	6168	5574	391730
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
1677	18.1	0.3	3.3	chr10	15200345	15200647	(118596775)	+	AluJr	SINE/Alu	1	294	(18)	393826
285	31.0	1.7	7.4	chr10	16847534	16847655	(116949767)	+	L2b	LINE/L2	3225	3339	(36)	396474
4492	13.3	2.1	4.8	chr10	16887547	16888388	(116909034)	+	L1MA8	LINE/L1	5466	6284	(7)	396529
2910	1.0	0.0	1.0	chr10	16908873	16909184	(116888238)	C	AluYb8	SINE/Alu	(9)	309	1	396556
186	34.8	9.8	0.0	chr10	16909343	16909434	(116887988)	C	MIRc	SINE/MIR	(63)	205	104	396557
502	37.0	1.9	0.0	chr10	17025362	17025569	(116771853)	+	MIR	SINE/MIR	33	244	(18)	396709
274	31.3	0.0	0.0	chr10	17027185	17027283	(116770139)	+	L1M5	LINE/L1	5664	5762	(362)	396711
2395	11.2	0.3	1.9	chr10	17029988	17030360	(116767062)	+	MER1A	DNA/hAT-Charlie	163	529	(0)	396715
3233	24.9	6.9	2.3	chr10	17056619	17057064	(116740358)	+	L1ME2	LINE/L1	5220	5683	(934)	396740
1638	21.2	11.5	0.0	chr10	17057070	17057469	(116739953)	C	MER66A	LTR/ERV1	(0)	478	27	396744
12	27.7	0.0	2.2	chr10	17063479	17063523	(116733899)	+	(TTTC)n	Simple_repeat	1	45	(0)	396754
344	27.0	12.2	0.0	chr10	17075390	17075507	(116721915)	+	L1ME3G	LINE/L1	5485	5599	(525)	396771
281	33.9	4.2	0.0	chr10	17075509	17075691	(116721731)	+	L1ME4b	LINE/L1	376	566	(326)	396772
907	5.6	0.0	0.0	chr10	17230905	17231011	(116566411)	C	AluSx3	SINE/Alu	(14)	297	191	397006
434	32.3	7.0	0.5	chr10	17235427	17235625	(116561797)	C	MIRb	SINE/MIR	(30)	238	26	397009
1320	15.0	1.4	15.6	chr10	17238023	17238368	(116559054)	C	AluJo	SINE/Alu	(16)	296	1	397010
1900	18.4	0.0	0.0	chr10	17238983	17239281	(116558141)	+	AluSx1	SINE/Alu	1	299	(13)	397011
341	32.4	6.4	12.4	chr10	17512437	17512718	(116284704)	C	MamGypLTR3a	LTR/Gypsy	(360)	621	358	397523
412	25.6	18.4	0.0	chr10	17512750	17512917	(116284505)	C	MIR	SINE/MIR	(43)	219	14	397524
303	22.7	1.1	2.5	chr10	17784390	17784479	(116012943)	+	MER5B	DNA/hAT-Charlie	47	144	(45)	398020
596	23.3	2.0	4.5	chr10	17784525	17784681	(116012741)	+	MER5B	DNA/hAT-Charlie	1	153	(25)	398021
263	39.1	2.8	2.8	chr10	17784722	17785074	(116012348)	C	L2	LINE/L2	(1879)	1540	1188	398022
285	37.6	0.6	0.0	chr10	17835783	17835939	(115961483)	C	MER5A	DNA/hAT-Charlie	(31)	158	1	398119
337	27.4	9.4	0.7	chr10	17835976	17836111	(115961311)	+	MIR	SINE/MIR	2	150	(112)	398120
264	30.3	1.5	0.0	chr10	18607741	18607806	(115189616)	+	MIRb	SINE/MIR	26	92	(176)	399358
324	28.2	18.6	0.0	chr10	18607870	18608000	(115189422)	+	MIR	SINE/MIR	102	262	(0)	399358
681	31.3	6.7	3.7	chr10	21340541	21340918	(112456504)	C	MLT1J2	LTR/ERVL-MaLR	(14)	434	45	403454
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
2266	9.2	0.7	0.7	chr10	22246304	22246598	(111550824)	C	AluSq2	SINE/Alu	(18)	295	1	404986
391	33.4	6.3	2.7	chr10	22246607	22246786	(111550636)	+	L2b	LINE/L2	3213	3387	(0)	404979
324	26.1	0.0	2.2	chr10	22246926	22247015	(111550407)	+	MLT1L	LTR/ERVL-MaLR	1	88	(522)	404987
520	24.3	11.3	2.7	chr10	22433982	22434167	(111363255)	+	MARNA	DNA/TcMar-Mariner	299	502	(84)	405257
1258	20.4	2.8	1.8	chr10	22599151	22599430	(111197992)	C	L1MB8	LINE/L1	(11)	6167	5885	405492
223	30.6	2.9	2.9	chr10	22620374	22620515	(111176907)	+	MIRc	SINE/MIR	6	145	(63)	405519
605	25.1	14.2	0.5	chr10	22620535	22620734	(111176688)	+	MER102a	DNA/hAT-Charlie	34	265	(65)	405520
2925	25.1	5.0	4.5	chr10	22623569	22624524	(111172898)	+	Charlie7	DNA/hAT-Charlie	213	1173	(1439)	405524
2360	22.9	8.2	5.2	chr10	22624553	22625358	(111172064)	+	Charlie7	DNA/hAT-Charlie	1575	2406	(206)	405525
1302	24.2	11.1	0.0	chr10	23331921	23332312	(110465110)	+	L1ME4b	LINE/L1	235	675	(217)	406630
3893	24.9	6.9	0.6	chr10	23337763	23338725	(110458697)	+	ERVL-E-int	LTR/ERVL	3529	4556	(1111)	406644
1144	12.8	0.0	7.7	chr10	23338727	23338921	(110458501)	+	AluJo	SINE/Alu	1	180	(132)	406645
2080	25.6	6.0	2.4	chr10	23338949	23339497	(110457925)	+	ERVL-E-int	LTR/ERVL	4598	5167	(500)	406644
280	30.4	3.6	7.5	chr10	24207517	24207690	(109589732)	+	UCON8	DNA	819	985	(130)	408111
225	16.1	1.8	6.7	chr10	24344599	24344658	(109452764)	+	MamGypLTR2c	LTR/Gypsy	865	921	(147)	408351
230	33.8	0.0	2.4	chr10	24902341	24902422	(108895000)	+	MamSINE1	SINE/tRNA-RTE	78	157	(133)	409362
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
1451	7.9	0.0	0.0	chr10	27154563	27154739	(106642683)	C	AluSx1	SINE/Alu	(5)	307	131	412952
41	28.6	2.1	0.7	chr10	28533143	28533283	(105264139)	+	(GCG)n	Simple_repeat	1	144	(0)	415306
1973	12.2	0.0	0.4	chr10	29140786	29141056	(104656366)	C	AluSz6	SINE/Alu	(31)	281	12	416379
2635	4.0	0.0	0.0	chr10	29691213	29691510	(104105912)	C	AluY	SINE/Alu	(13)	298	1	417275
19	17.2	3.7	1.8	chr10	29691511	29691525	(104105897)	+	(AATAATG)n	Simple_repeat	6	20	(0)	417276
19	6.9	0.0	3.0	chr10	29863326	29863358	(103934064)	+	(TCCTC)n	Simple_repeat	1	33	(0)	417613
439	26.4	7.9	5.2	chr10	30000702	30000830	(103796592)	+	MIRc	SINE/MIR	79	217	(51)	417881
1756	20.9	6.6	4.9	chr10	30000831	30001339	(103796083)	C	LTR40a	LTR/ERVL	(0)	519	2	417882
363	27.4	6.5	8.5	chr10	30111439	30111673	(103685749)	C	L2a	LINE/L2	(1)	3425	3196	418064
2706	19.2	0.8	0.4	chr10	30111683	30112191	(103685231)	+	L1MB5	LINE/L1	5364	5873	(301)	418065
20	0.0	0.0	0.0	chr10	30349280	30349301	(103448121)	+	(A)n	Simple_repeat	1	22	(0)	418534
12	16.8	0.0	0.0	chr10	31760228	31760254	(102037168)	+	(CCGCC)n	Simple_repeat	1	27	(0)	420705
184	34.3	9.5	11.8	chr10	31816219	31816532	(101980890)	+	L2c	LINE/L2	3082	3387	(0)	420812
330	31.2	17.0	5.1	chr10	31940941	31941156	(101856266)	+	AmnSINE1	SINE/5S-Deu-L2	95	341	(234)	421019
919	11.8	0.0	1.6	chr10	31944396	31944522	(101852900)	C	AluJr	SINE/Alu	(187)	125	1	421028
13	26.7	0.0	2.1	chr10	31944639	31944685	(101852737)	+	(ATTAA)n	Simple_repeat	1	47	(0)	421029
962	20.2	0.0	0.0	chr10	32982241	32982398	(100815024)	C	FRAM	SINE/Alu	(18)	158	1	422570
265	30.4	0.0	0.0	chr10	32982400	32982468	(100814954)	+	L2a	LINE/L2	3358	3426	(0)	422571
1882	10.0	0.0	1.2	chr10	32982519	32982768	(100814654)	C	AluSz6	SINE/Alu	(11)	301	55	422572
269	23.5	10.6	0.8	chr10	33005964	33006091	(100791331)	C	MIRc	SINE/MIR	(73)	195	56	422615
21	19.4	0.0	0.0	chr10	33237930	33237970	(100559452)	+	(CA)n	Simple_repeat	1	41	(0)	422982
3678	11.5	4.4	0.3	chr10	33365851	33366417	(100431005)	+	LTR26	LTR/ERV1	13	603	(0)	423146
525	28.7	15.9	0.8	chr10	34698812	34699078	(99098344)	+	L2	LINE/L2	1811	2125	(1294)	425110
283	22.2	2.7	4.0	chr10	34699080	34699154	(99098268)	C	Tigger20a	DNA/TcMar-Tigger	(389)	584	511	425111
27	9.1	0.0	3.9	chr10	34699320	34699370	(99098052)	+	(ATAAAAA)n	Simple_repeat	1	51	(0)	425112
194	33.3	9.2	7.4	chr10	35005903	35006051	(98791371)	+	L2b	LINE/L2	2956	3107	(268)	425782
269	36.6	1.0	1.0	chr10	35006132	35006233	(98791189)	+	L2b	LINE/L2	3256	3357	(18)	425782
2156	9.7	0.7	1.4	chr10	35057812	35058100	(98739322)	+	AluSz	SINE/Alu	1	287	(25)	425868
5284	12.1	3.0	1.4	chr10	35058123	35058192	(98739230)	+	Tigger1	DNA/TcMar-Tigger	1577	1646	(772)	425869
2330	19.4	7.5	10.1	chr10	35058193	35058907	(98738515)	+	LTR34	LTR/ERV1	1	695	(4)	425870
364	33.8	9.9	1.4	chr10	36675358	36675495	(97121927)	C	MIRc	SINE/MIR	(113)	155	5	428392
35955	17.0	2.0	1.6	chr10	42487021	42494108	(91303314)	+	HERVK9-int	LTR/ERVK	1	7369	(65)	432150
19	15.9	2.4	0.0	chr10	43648829	43648870	(90148552)	+	(GCCGGC)n	Simple_repeat	1	43	(0)	433924
262	33.3	0.0	0.9	chr10	43857468	43857579	(89939843)	+	MIR	SINE/MIR	125	235	(27)	434199
220	20.0	1.8	3.5	chr10	48391241	48391297	(85406125)	+	MIRc	SINE/MIR	105	160	(108)	440488
4240	17.5	7.3	5.3	chr10	48391527	48392419	(85405003)	C	MER21A	LTR/ERVL	(6)	925	13	440489
304	24.2	11.6	4.4	chr10	50605180	50605339	(83192083)	C	MamRep1879	DNA/hAT-Tip100?	(41)	175	3	443623
714	22.6	10.2	3.8	chr10	52318972	52319237	(81478185)	C	L1ME4b	LINE/L1	(215)	677	393	446109
547	32.1	3.0	3.9	chr10	52352078	52352310	(81445112)	+	MIR	SINE/MIR	29	259	(3)	446166
16	8.2	0.0	0.0	chr10	58334920	58334945	(75462477)	+	(GGCGG)n	Simple_repeat	1	26	(0)	453993
16	16.8	0.0	0.0	chr10	58641454	58641481	(75155941)	+	(T)n	Simple_repeat	1	28	(0)	454436
544	28.4	14.4	0.0	chr10	58698724	58698931	(75098491)	C	MIR	SINE/MIR	(16)	246	4	454497
14	20.5	2.6	0.0	chr10	58856701	58856739	(74940683)	+	(GAATG)n	Simple_repeat	1	40	(0)	454702
1084	13.8	0.0	0.0	chr10	58856872	58857023	(74940399)	C	AluYc	SINE/Alu	(12)	287	136	454703
16	0.0	0.0	0.0	chr10	59079894	59079911	(74717511)	+	(T)n	Simple_repeat	1	18	(0)	455036
14	14.4	5.0	2.4	chr10	59362668	59362707	(74434715)	+	G-rich	Low_complexity	1	42	(0)	455458
291	33.1	11.2	5.9	chr10	59387679	59388050	(74409372)	C	MLT1K	LTR/ERVL-MaLR	(11)	584	191	455501
1002	20.7	12.1	6.5	chr10	59388106	59388284	(74409138)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	182	455502
43	2.5	0.0	0.0	chr10	59388285	59388325	(74409097)	+	(GA)n	Simple_repeat	1	41	(0)	455503
431	22.8	7.9	5.3	chr10	59513518	59513724	(74283698)	C	Charlie15a	DNA/hAT-Charlie	(39)	185	1	455661
1692	20.5	6.2	1.2	chr10	59514117	59514530	(74282892)	C	L1MB8	LINE/L1	(5)	6173	5738	455662
2674	15.7	2.6	1.7	chr10	59561797	59562218	(74235204)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	455732
1297	21.3	15.2	3.8	chr10	59583168	59583514	(74213908)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	455756
216	35.1	3.1	1.1	chr10	60305412	60305506	(73491916)	C	L3b	LINE/CR1	(148)	5084	4988	456874
229	30.9	10.9	5.4	chr10	60305514	60305643	(73491779)	C	Plat_L3	LINE/CR1	(259)	3327	3190	456875
280	25.0	1.1	3.3	chr10	60313231	60313321	(73484101)	C	LTR90A	LTR	(24)	952	864	456890
662	29.8	0.8	3.9	chr10	60384502	60384756	(73412666)	+	MIR	SINE/MIR	4	250	(12)	456992
512	34.0	10.8	3.0	chr10	60384791	60385572	(73411850)	+	L2a	LINE/L2	2529	3426	(0)	456993
369	28.3	9.8	0.8	chr10	60424159	60424279	(73373143)	+	MER94	DNA/hAT-Blackjack	1	133	(1)	457047
180	24.5	9.4	10.2	chr10	60426574	60426691	(73370731)	+	MIRc	SINE/MIR	149	265	(3)	457051
304	20.9	1.7	10.8	chr10	62046240	62046368	(71751054)	+	UCON78	DNA	34	150	(293)	459472
1978	16.0	5.8	0.5	chr10	62384435	62384842	(71412580)	C	Charlie1a	DNA/hAT-Charlie	(171)	1284	854	459975
3018	29.5	4.9	2.9	chr10	62421893	62423037	(71374385)	+	ERVL-E-int	LTR/ERVL	2444	3612	(2055)	460034
15	25.2	4.8	1.5	chr10	63133249	63133311	(70664111)	+	(GGC)n	Simple_repeat	1	66	(0)	461239
211	25.9	0.7	0.0	chr10	63700146	63700199	(70097223)	C	MIR	SINE/MIR	(100)	168	106	462270
509	31.7	2.4	1.2	chr10	63713692	63713854	(70083568)	+	MIR3	SINE/MIR	30	194	(14)	462298
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
58	7.6	0.0	1.2	chr10	67849220	67849359	(65948063)	+	(GGAGG)n	Simple_repeat	1	138	(0)	468032
512	31.9	4.6	5.3	chr10	68135708	68135992	(65661430)	C	L2a	LINE/L2	(3)	3423	3141	468586
226	24.6	14.9	2.6	chr10	70267424	70267538	(63529884)	C	MIRb	SINE/MIR	(69)	199	67	473074
2078	9.8	0.0	3.9	chr10	70378362	70378504	(63418918)	+	AluSq2	SINE/Alu	2	133	(180)	473329
2058	8.9	5.2	0.7	chr10	70378505	70378796	(63418626)	+	AluSq2	SINE/Alu	1	306	(7)	473330
189	31.9	8.7	0.0	chr10	70694103	70694196	(63103226)	+	AmnSINE2	SINE/tRNA-Deu	12	114	(244)	473962
187	37.3	8.0	6.4	chr10	71241758	71241992	(62555430)	+	OldhAT1	DNA/hAT-Ac	1927	2165	(683)	474855
720	24.5	8.1	0.0	chr10	71766607	71766798	(62030624)	C	MIRb	SINE/MIR	(6)	262	54	475869
267	23.6	1.4	4.0	chr10	71766974	71767048	(62030374)	C	L2b	LINE/L2	(0)	3375	3303	475870
404	26.1	6.9	0.0	chr10	71860652	71860785	(61936637)	C	Charlie4z	DNA/hAT-Charlie	(19)	148	5	476035
286	29.4	4.2	0.6	chr10	71860791	71860897	(61936525)	C	MIR3	SINE/MIR	(104)	126	14	476036
2906	13.3	2.8	4.3	chr10	72162958	72163452	(61633970)	+	L1MB5	LINE/L1	5333	5831	(343)	476646
675	35.2	13.0	3.2	chr10	72812829	72813354	(60984068)	+	MamRTE1	LINE/RTE-BovB	3082	3666	(146)	478086
16	16.4	11.4	1.3	chr10	73785769	73785838	(60011584)	+	(CCCTCGG)n	Simple_repeat	1	78	(0)	479943
12	9.2	0.0	4.0	chr10	73874462	73874486	(59922936)	+	(GCGG)n	Simple_repeat	1	25	(0)	480061
37	21.8	4.0	3.1	chr10	73874612	73874736	(59922686)	+	(CCCCG)n	Simple_repeat	1	130	(0)	480062
557	32.6	5.2	2.2	chr10	73894351	73894573	(59902849)	C	MIRb	SINE/MIR	(0)	268	39	480112
264	36.4	3.2	0.2	chr10	73899464	73899638	(59897784)	C	MIR1_Amn	SINE/MIR	(89)	179	3	480125
184	39.5	4.8	5.2	chr10	74503242	74503492	(59293930)	C	L2	LINE/L2	(340)	3079	2830	481308
24	31.9	1.0	1.9	chr10	74826673	74826776	(58970646)	+	(GGC)n	Simple_repeat	1	105	(0)	481944
17	12.2	2.6	2.6	chr10	75509023	75509060	(58288362)	+	(TTTCTT)n	Simple_repeat	1	39	(0)	483210
17	16.1	0.0	0.0	chr10	75509265	75509293	(58288129)	+	(TG)n	Simple_repeat	1	29	(0)	483211
572	27.3	3.8	6.8	chr10	76086768	76087015	(57710407)	C	UCON89	DNA/hAT?	(0)	242	3	484035
2819	17.2	3.5	1.9	chr10	76352150	76352688	(57444734)	C	MER44B	DNA/TcMar-Tigger	(2)	548	1	484386
271	29.6	10.9	2.8	chr10	77160550	77160729	(56636693)	+	MIRc	SINE/MIR	17	224	(44)	485446
208	25.7	2.8	5.4	chr10	77162987	77163060	(56634362)	+	L2c	LINE/L2	3355	3426	(0)	485445
1555	23.3	4.1	1.2	chr10	77163106	77163435	(56633987)	+	MER58B	DNA/hAT-Charlie	1	340	(1)	485449
279	28.9	9.3	1.0	chr10	77163986	77164083	(56633339)	+	MIR3	SINE/MIR	93	199	(9)	485452
645	26.6	4.0	3.7	chr10	77179661	77179906	(56617516)	+	MIRb	SINE/MIR	18	264	(4)	485494
48	0.0	0.0	0.0	chr10	77242900	77242940	(56554482)	+	(AC)n	Simple_repeat	1	41	(0)	485586
15	12.6	3.7	0.0	chr10	77242944	77242970	(56554452)	+	(TC)n	Simple_repeat	1	28	(0)	485587
14	7.2	0.0	8.6	chr10	77243188	77243222	(56554200)	+	(CACCA)n	Simple_repeat	1	35	(0)	485588
732	22.7	13.2	3.1	chr10	77393397	77393619	(56403803)	C	MIR	SINE/MIR	(0)	262	14	485829
221	31.3	12.7	7.1	chr10	77417044	77417383	(56380039)	+	L2c	LINE/L2	3026	3387	(0)	485876
1243	20.7	7.1	13.1	chr10	77511780	77512185	(56285237)	C	MER83	LTR/ERV1	(27)	421	42	486068
777	5.0	2.0	0.0	chr10	77512182	77512281	(56285141)	C	MER83	LTR/ERV1	(346)	102	1	486069
16	0.0	0.0	0.0	chr10	78029613	78029630	(55767792)	+	(T)n	Simple_repeat	1	18	(0)	487025
233	25.0	0.0	0.0	chr10	78256180	78256231	(55541191)	+	MamRep605	LTR?	489	540	(309)	487477
201	35.6	5.5	0.0	chr10	78256414	78256517	(55540905)	C	MER5B	DNA/hAT-Charlie	(65)	113	4	487478
640	24.5	6.5	2.4	chr10	78312517	78312721	(55484701)	+	MamRep564	Unknown	39	252	(105)	487590
345	28.6	1.8	0.0	chr10	78312888	78312999	(55484423)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	429	487591
556	26.9	8.4	1.5	chr10	78313033	78313232	(55484190)	C	MER103C	DNA/hAT-Charlie	(0)	297	83	487592
223	32.9	3.4	0.0	chr10	78965027	78965111	(54832311)	+	MIR3	SINE/MIR	99	186	(22)	488787
21	19.9	6.6	0.0	chr10	78974432	78974492	(54822930)	+	(TCTT)n	Simple_repeat	1	65	(0)	488806
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
543	31.5	8.0	0.0	chr10	79299690	79299873	(54497549)	C	MIRb	SINE/MIR	(34)	234	35	489400
288	25.7	4.5	0.9	chr10	79317690	79317795	(54479627)	+	MER112	DNA/hAT-Charlie	49	158	(103)	489412
51	0.0	0.0	0.0	chr10	79317796	79317839	(54479583)	+	(GT)n	Simple_repeat	1	44	(0)	489413
815	21.9	8.8	1.6	chr10	79332173	79332414	(54465008)	C	L1ME2	LINE/L1	(4)	6158	5898	489434
407	41.0	10.7	1.6	chr10	82866424	82867060	(50930362)	C	L2	LINE/L2	(2048)	1371	670	494621
483	32.0	8.0	3.8	chr10	82924971	82925210	(50872212)	C	MIRb	SINE/MIR	(16)	252	2	494694
258	34.3	0.9	2.8	chr10	82981960	82982067	(50815355)	C	MIRc	SINE/MIR	(123)	145	40	494782
272	28.8	19.0	0.0	chr10	83212910	83213078	(50584344)	C	MIRb	SINE/MIR	(45)	223	1	495100
2984	23.5	15.5	3.1	chr10	84336241	84337646	(49459776)	C	L2a	LINE/L2	(0)	3426	1795	496717
33	5.6	0.0	0.0	chr10	86654377	86654413	(47143009)	+	(AC)n	Simple_repeat	1	37	(0)	499923
27	14.1	5.8	5.4	chr10	87342359	87342445	(46454977)	+	(GGC)n	Simple_repeat	1	92	(0)	501147
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
22	30.2	2.0	2.9	chr10	87863717	87863818	(45933604)	+	(CGG)n	Simple_repeat	1	104	(0)	501932
235	23.3	8.8	2.7	chr10	88754601	88754675	(45042747)	C	MamRep605	LTR?	(315)	534	455	503306
701	29.0	2.9	2.9	chr10	88991924	88992161	(44805261)	C	MIRb	SINE/MIR	(16)	252	15	503687
205	26.7	5.1	3.9	chr10	89553559	89553636	(44243786)	+	MIR3	SINE/MIR	82	160	(48)	504564
406	24.3	3.9	5.7	chr10	90193511	90193667	(43603755)	C	L5	LINE/RTE-X	(123)	2142	1989	505509
1738	18.5	2.1	0.0	chr10	90222119	90222448	(43574974)	C	L1MC1	LINE/L1	(18)	6315	5979	505557
767	23.0	8.0	0.8	chr10	90227477	90227730	(43569692)	C	L1MEf	LINE/L1	(3394)	2925	2652	505566
195	27.2	18.8	3.1	chr10	90931460	90931588	(42865834)	C	MIR	SINE/MIR	(37)	231	71	506544
2877	29.8	6.5	6.0	chr10	90959769	90961117	(42836305)	C	ERVL-B4-int	LTR/ERVL	(1785)	3929	2368	506579
319	31.7	0.0	0.0	chr10	90968937	90969037	(42828385)	+	MamRep605	LTR?	403	503	(346)	506592
3157	15.2	3.3	0.4	chr10	91191021	91191554	(42605868)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	506944
259	29.8	6.3	5.5	chr10	91341189	91341298	(42456124)	C	LFSINE_Vert	SINE/tRNA	(283)	176	66	507177
2246	21.5	6.5	10.2	chr10	91377284	91378138	(42419284)	C	L1MC5	LINE/L1	(375)	8929	8109	507229
1084	19.1	7.6	0.4	chr10	91378144	91378400	(42419022)	C	L1MC5	LINE/L1	(2352)	6952	6676	507229
703	27.4	5.4	10.8	chr10	91378429	91378882	(42418540)	C	Charlie7	DNA/hAT-Charlie	(2184)	428	1	507231
36	19.7	6.6	0.9	chr10	91616981	91617086	(42180336)	+	(AT)n	Simple_repeat	1	113	(0)	507587
1657	23.5	7.7	4.7	chr10	91617113	91617643	(42179779)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	507588
225	32.4	0.0	0.0	chr10	91653728	91653795	(42143627)	C	L3	LINE/CR1	(1)	4098	4031	507643
1276	19.8	5.0	1.0	chr10	91653894	91654199	(42143223)	C	MLT1A1	LTR/ERVL-MaLR	(89)	319	1	507644
18	4.0	0.0	3.6	chr10	91672228	91672255	(42125167)	+	(CTG)n	Simple_repeat	1	28	(0)	507677
13	18.7	2.2	4.3	chr10	92211308	92211353	(41586069)	+	(TATATTG)n	Simple_repeat	1	47	(0)	508591
15	14.3	6.0	3.8	chr10	92211401	92211450	(41585972)	+	A-rich	Low_complexity	1	53	(0)	508592
2376	9.2	0.0	2.0	chr10	92211537	92211841	(41585581)	C	AluSx1	SINE/Alu	(12)	300	2	508593
2037	11.4	6.8	0.0	chr10	93465495	93465813	(40331609)	C	AluSx	SINE/Alu	(0)	312	2	511167
19	22.7	0.0	0.0	chr10	93471306	93471346	(40326076)	+	(T)n	Simple_repeat	1	41	(0)	511182
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
591	30.3	5.3	1.7	chr10	94194586	94194823	(39602599)	+	MIR	SINE/MIR	15	261	(1)	512543
427	22.8	5.0	6.6	chr10	95229540	95229635	(38567787)	C	L1ME3	LINE/L1	(55)	6107	6011	513932
244	24.1	4.9	0.0	chr10	95229834	95229891	(38567531)	C	L1MC4	LINE/L1	(1117)	6765	6705	513926
25	11.5	0.0	0.0	chr10	95247039	95247076	(38550346)	+	(CT)n	Simple_repeat	1	38	(0)	513960
470	13.1	0.0	0.0	chr10	95308899	95308959	(38488463)	C	AluYb8	SINE/Alu	(257)	61	1	514071
498	26.4	6.6	7.8	chr10	96090395	96090605	(37706817)	C	MIRb	SINE/MIR	(28)	240	37	515390
204	22.9	1.6	10.3	chr10	97574947	97575014	(36222408)	C	L2b	LINE/L2	(1)	3374	3313	518240
353	20.3	1.4	0.0	chr10	97574991	97575059	(36222363)	C	MIRb	SINE/MIR	(35)	233	164	518241
1667	26.8	4.6	2.1	chr10	98323120	98323652	(35473770)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	519716
235	19.4	0.0	0.0	chr10	99776192	99776227	(34021195)	C	MIR3	SINE/MIR	(137)	71	36	522091
1748	15.0	1.7	7.0	chr10	99966784	99967097	(33830325)	C	AluJo	SINE/Alu	(15)	297	1	522407
12	18.8	4.3	4.2	chr10	100267768	100267813	(33529609)	+	GA-rich	Low_complexity	1	48	(0)	523048
19	27.1	4.0	0.0	chr10	101062594	101062669	(32734753)	+	(GCTGCC)n	Simple_repeat	1	79	(0)	524410
13	9.1	0.0	3.9	chr10	102918287	102918312	(30879110)	+	(CTCC)n	Simple_repeat	1	26	(0)	527858
26	14.1	8.6	0.0	chr10	102918607	102918676	(30878746)	+	(GCGGCT)n	Simple_repeat	1	76	(0)	527859
17	8.0	0.0	0.0	chr10	103739451	103739477	(30057945)	+	(GGGA)n	Simple_repeat	1	27	(0)	529541
17	24.7	3.3	3.2	chr10	104121880	104121940	(29675482)	+	(CG)n	Simple_repeat	1	63	(0)	530197
13	21.2	9.8	3.0	chr10	104231968	104232059	(29565363)	+	G-rich	Low_complexity	1	101	(0)	530386
1935	13.4	7.8	2.3	chr10	107972190	107972541	(25824881)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	535985
556	32.5	11.1	1.4	chr10	108452431	108452646	(25344776)	C	MIR	SINE/MIR	(19)	243	6	536638
311	28.3	2.8	2.8	chr10	108452683	108452791	(25344631)	C	MIRc	SINE/MIR	(146)	122	14	536639
381	31.0	6.4	5.2	chr10	108452980	108453215	(25344207)	C	MIRb	SINE/MIR	(24)	244	10	536640
14405	15.9	3.0	1.7	chr10	108735404	108737275	(25060147)	C	L1PA15	LINE/L1	(479)	6213	4277	537026
4749	23.5	9.4	8.8	chr10	108812167	108812347	(24985075)	+	MSTB2-int	LTR/ERVL-MaLR	1	121	(1530)	537112
2336	18.9	2.6	1.1	chr10	108812348	108812801	(24984621)	C	LOR1b	LTR/ERV1	(0)	461	1	537114
4749	23.5	9.4	8.8	chr10	108812802	108813401	(24984021)	+	MSTB2-int	LTR/ERVL-MaLR	122	708	(943)	537112
603	25.3	7.5	9.0	chr10	109206001	109206256	(24591166)	C	MER77B	LTR/ERVL	(408)	292	41	537669
16	8.7	0.0	0.0	chr10	110304800	110304841	(23492581)	+	(GCA)n	Simple_repeat	1	42	(0)	539233
557	15.8	15.5	0.8	chr10	110305131	110305251	(23492171)	+	MER5A	DNA/hAT-Charlie	48	189	(0)	539234
279	29.3	15.6	3.6	chr10	110496172	110496447	(23300975)	+	L2b	LINE/L2	3048	3362	(13)	539643
278	27.6	3.8	0.0	chr10	110912476	110912551	(22884871)	+	MamSINE1	SINE/tRNA-RTE	101	179	(111)	540361
1778	12.3	1.0	8.2	chr10	113073395	113073710	(20723712)	+	AluJo	SINE/Alu	11	303	(9)	543742
234	34.6	1.8	3.6	chr10	114584360	114584470	(19212952)	C	MamRep434	DNA/TcMar-Tigger	(305)	121	13	546166
1097	26.0	7.3	4.8	chr10	114779507	114779962	(19017460)	C	L1ME3G	LINE/L1	(155)	769	302	546507
2155	14.4	16.9	2.8	chr10	114780295	114780730	(19016692)	C	LTR54	LTR/ERV1	(0)	510	1	546508
243	29.3	10.0	3.9	chr10	118692935	118693037	(15104385)	C	MER117	DNA/hAT-Charlie	(81)	116	7	552438
222	29.4	0.0	2.9	chr10	118693140	118693209	(15104213)	+	MER5A	DNA/hAT-Charlie	100	167	(22)	552439
183	28.6	3.8	3.8	chr10	118693162	118693241	(15104181)	C	MER5A	DNA/hAT-Charlie	(109)	80	1	552440
16	21.7	0.0	0.0	chr10	119079980	119080011	(14717411)	+	A-rich	Low_complexity	1	32	(0)	553159
359	29.4	13.9	0.6	chr10	119178325	119178492	(14618930)	C	MIRb	SINE/MIR	(20)	248	55	553394
187	30.0	4.1	2.8	chr10	119306169	119306240	(14491182)	C	MamRTE1	LINE/RTE-BovB	(1010)	2802	2730	553657
1837	17.9	6.5	0.5	chr10	120429703	120430079	(13367343)	C	L1MB3	LINE/L1	(0)	6183	5783	555641
477	25.9	2.5	0.0	chr10	120460825	120460940	(13336482)	C	MIR	SINE/MIR	(110)	152	34	555680
13	24.1	4.8	3.1	chr10	121927973	121928034	(11869388)	+	(GCC)n	Simple_repeat	1	65	(0)	557959
15	19.1	0.0	2.6	chr10	122141167	122141204	(11656218)	+	GA-rich	Low_complexity	1	38	(0)	558410
183	22.9	3.2	12.9	chr10	122462765	122462834	(11334588)	+	MamRTE1	LINE/RTE-BovB	3566	3628	(184)	558913
39	0.0	0.0	0.0	chr10	122980724	122980759	(10816663)	+	(GCGGG)n	Simple_repeat	1	36	(0)	559574
18	25.7	0.0	0.0	chr10	123008737	123008784	(10788638)	+	(GCC)n	Simple_repeat	1	48	(0)	559613
17	27.6	0.0	0.0	chr10	126062501	126062552	(7734870)	+	(TCTG)n	Simple_repeat	1	52	(0)	564393
207	31.9	7.6	9.4	chr10	126350664	126350864	(7446558)	C	MIRc	SINE/MIR	(28)	240	44	564739
1079	29.2	1.4	3.4	chr10	126384325	126384682	(7412740)	+	HAL1	LINE/L1	1649	1999	(508)	564774
3102	19.5	10.8	3.6	chr10	126384698	126385503	(7411919)	C	MER21B	LTR/ERVL	(4)	864	1	564779
18	24.5	0.0	4.8	chr10	130136409	130136471	(3660951)	+	(GGC)n	Simple_repeat	1	63	(0)	569159
19	18.0	5.2	1.6	chr10	130136516	130136573	(3660849)	+	G-rich	Low_complexity	1	61	(0)	569160
32	17.7	6.4	4.5	chr11	695191	695315	(134391307)	+	(AGCCG)n	Simple_repeat	1	133	(0)	573781
18	7.8	4.3	6.2	chr11	695547	695592	(134391030)	+	(GCCGA)n	Simple_repeat	1	48	(0)	573782
1632	19.2	0.7	3.1	chr11	841425	841617	(134245005)	C	AluJb	SINE/Alu	(3)	309	126	574010
13	9.9	2.6	7.7	chr11	842875	842912	(134243710)	+	(GCG)n	Simple_repeat	1	39	(0)	574013
1967	12.6	2.1	1.2	chr11	1264402	1264730	(133821892)	C	THE1D	LTR/ERVL-MaLR	(0)	381	50	574419
2630	7.0	2.8	0.6	chr11	1264731	1265077	(133821545)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	574420
16	8.7	0.0	0.0	chr11	6481521	6481545	(128605077)	+	(AGC)n	Simple_repeat	1	25	(0)	581392
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
1740	23.0	5.8	5.8	chr11	8011868	8012370	(127074252)	+	MER77	LTR/ERVL	102	604	(0)	583379
677	21.1	0.0	0.0	chr11	8012373	8012481	(127074141)	+	MER68	LTR/ERVL	454	562	(1)	583380
359	32.9	5.1	4.7	chr11	8068599	8068895	(127017727)	+	L2c	LINE/L2	3072	3353	(22)	583456
401	32.6	5.0	3.1	chr11	8069010	8069205	(127017417)	C	MIR3	SINE/MIR	(2)	206	7	583458
13	15.8	2.7	2.6	chr11	8682939	8682975	(126403647)	+	G-rich	Low_complexity	1	38	(0)	584338
33	5.2	0.0	0.0	chr11	8964364	8964403	(126122219)	+	(GGCTCA)n	Simple_repeat	1	40	(0)	584803
309	0.0	0.0	0.0	chr11	9566557	9566592	(125520030)	+	MER11C	LTR/ERVK	1	36	(1035)	586093
1154	28.2	9.2	1.3	chr11	10394205	10394742	(124691880)	+	L2a	LINE/L2	2830	3426	(0)	587496
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
197	32.3	11.0	5.1	chr11	12042492	12042628	(123043994)	+	L2b	LINE/L2	3226	3371	(4)	590115
2551	20.5	2.5	0.9	chr11	12065920	12066461	(123020161)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	8	590174
278	22.6	8.3	11.9	chr11	12066519	12066669	(123019953)	+	MER5B	DNA/hAT-Charlie	33	177	(1)	590175
249	32.3	4.3	11.4	chr11	12138592	12138818	(122947804)	+	L2b	LINE/L2	3166	3375	(0)	590311
16	5.3	0.0	0.0	chr11	12183167	12183186	(122903436)	+	(T)n	Simple_repeat	1	20	(0)	590394
1510	16.7	3.4	0.4	chr11	12232791	12233049	(122853573)	+	Tigger7	DNA/TcMar-Tigger	1	267	(2224)	590486
521	20.6	0.0	0.0	chr11	12233048	12233144	(122853478)	+	Tigger7	DNA/TcMar-Tigger	2395	2491	(0)	590487
505	32.5	6.5	0.5	chr11	12233147	12233335	(122853287)	C	MIRc	SINE/MIR	(26)	242	42	590488
22	12.4	2.2	2.1	chr11	12377459	12377504	(122709118)	+	GA-rich	Low_complexity	1	47	(0)	590686
11	24.6	4.0	1.9	chr11	12377559	12377608	(122709014)	+	(AGCCGC)n	Simple_repeat	1	52	(0)	590687
19	8.8	2.6	2.6	chr11	12674114	12674151	(122412471)	+	(CCGCC)n	Simple_repeat	1	39	(0)	591159
24	25.0	0.0	0.0	chr11	12815240	12815299	(122271323)	+	(TCCC)n	Simple_repeat	1	60	(0)	591363
2301	10.1	0.0	0.3	chr11	13215691	13215986	(121870636)	+	AluSq2	SINE/Alu	3	297	(16)	591994
539	29.2	3.1	7.5	chr11	13215987	13216035	(121870587)	+	MIRb	SINE/MIR	169	210	(58)	591993
11	25.0	5.6	4.0	chr11	13668410	13668481	(121418141)	+	(CTCCCG)n	Simple_repeat	1	76	(0)	592645
17	4.3	0.0	0.0	chr11	13668730	13668753	(121417869)	+	(GCG)n	Simple_repeat	1	24	(0)	592646
526	30.4	3.0	5.7	chr11	14422191	14422306	(120664316)	C	MIR	SINE/MIR	(141)	127	2	593917
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
1661	14.3	3.4	5.7	chr11	18408632	18408932	(116677690)	+	AluSg	SINE/Alu	2	295	(15)	600459
941	12.4	9.1	5.6	chr11	18408933	18409030	(116677592)	C	MER30B	DNA/hAT-Charlie	(75)	115	2	600458
459	18.9	1.9	5.4	chr11	18409032	18409108	(116677514)	C	L1MB7	LINE/L1	(57)	6127	6054	600460
1816	15.2	3.7	0.7	chr11	18409109	18409398	(116677224)	+	AluJb	SINE/Alu	1	299	(13)	600461
459	18.9	1.9	5.4	chr11	18409399	18409432	(116677190)	C	L1MB7	LINE/L1	(131)	6053	6020	600460
22	0.0	0.0	0.0	chr11	19374310	19374333	(115712289)	+	(T)n	Simple_repeat	1	24	(0)	602086
1758	13.7	5.3	4.7	chr11	19928973	19929271	(115157351)	+	AluSz	SINE/Alu	1	301	(11)	603081
5522	19.5	5.0	2.6	chr11	20131946	20133244	(114953378)	+	L1M3f	LINE/L1	1238	2542	(5023)	603401
19	28.6	3.5	1.1	chr11	22829842	22829927	(112256695)	+	(GCCCC)n	Simple_repeat	1	89	(0)	607508
11	29.6	2.0	0.0	chr11	23898226	23898274	(111188348)	+	A-rich	Low_complexity	1	50	(0)	608962
1939	18.8	0.8	0.0	chr11	23903470	23903863	(111182759)	+	L1MA4	LINE/L1	5904	6300	(0)	608975
568	31.0	4.7	2.1	chr11	26231580	26231824	(108854798)	+	MIR	SINE/MIR	14	261	(1)	612150
574	35.9	4.9	3.4	chr11	26247082	26247462	(108839160)	C	L1M5	LINE/L1	(989)	5157	4771	612181
2295	9.3	0.0	1.0	chr11	26247727	26248028	(108838594)	C	AluSx3	SINE/Alu	(10)	301	3	612182
363	37.9	5.6	3.8	chr11	28833654	28834267	(106252355)	C	L2c	LINE/L2	(128)	3259	2632	616122
226	26.2	4.7	0.0	chr11	28836399	28836459	(106250163)	C	LTR88b	LTR/Gypsy?	(410)	427	364	616124
268	29.8	1.2	0.0	chr11	28836482	28836565	(106250057)	C	L2a	LINE/L2	(0)	3426	3342	616125
190	29.0	6.1	0.0	chr11	28836641	28836702	(106249920)	C	L2a	LINE/L2	(232)	3155	3090	616125
217	27.0	8.4	3.6	chr11	29300737	29300852	(105785770)	+	L2c	LINE/L2	3029	3148	(239)	616819
453	34.5	10.7	5.2	chr11	29312664	29313085	(105773537)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	616836
266	24.6	1.6	0.0	chr11	29313131	29313191	(105773431)	C	MIRc	SINE/MIR	(205)	63	2	616837
13	8.1	0.0	6.7	chr11	31645862	31645891	(103440731)	+	(CCACC)n	Simple_repeat	1	30	(0)	620255
733	23.2	10.8	0.0	chr11	32583338	32583535	(102503087)	C	L1ME1	LINE/L1	(468)	5711	5490	621907
19	4.5	0.0	0.0	chr11	32671399	32671421	(102415201)	+	(A)n	Simple_repeat	1	23	(0)	622036
2500	17.1	7.8	0.9	chr11	33690158	33690624	(101395998)	C	LTR44	LTR/ERV1	(0)	519	18	623910
1912	21.3	3.9	2.1	chr11	33692252	33692677	(101393945)	C	MER63B	DNA/hAT-Blackjack	(2)	434	1	623913
13	16.2	2.7	2.6	chr11	34266598	34266634	(100819988)	+	(TCTCC)n	Simple_repeat	1	38	(0)	624948
213	25.5	0.0	0.0	chr11	34343391	34343441	(100743181)	+	MER5B	DNA/hAT-Charlie	62	112	(66)	625103
19	12.8	0.0	0.0	chr11	34343447	34343480	(100743142)	+	(ACAC)n	Simple_repeat	1	34	(0)	625104
2146	12.3	0.3	0.0	chr11	34343481	34343772	(100742850)	C	AluSx1	SINE/Alu	(18)	294	2	625105
697	23.0	14.2	4.5	chr11	34345008	34345317	(100741305)	+	L2a	LINE/L2	2737	3081	(338)	625109
382	18.8	4.8	1.2	chr11	34345397	34345477	(100741145)	+	L2a	LINE/L2	3342	3425	(1)	625109
243	13.9	0.0	0.0	chr11	34599598	34599633	(100486989)	C	U2	snRNA	(152)	36	1	625562
207	19.8	0.0	2.8	chr11	35111956	35112015	(99974607)	+	L2a	LINE/L2	3323	3418	(8)	626259
206	33.3	1.2	4.7	chr11	35165735	35165819	(99920803)	C	MIR3	SINE/MIR	(94)	114	33	626346
1021	19.4	1.1	1.6	chr11	35215005	35215193	(99871429)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	626409
542	27.6	8.6	2.7	chr11	35215261	35215480	(99871142)	+	MIR	SINE/MIR	2	235	(27)	626410
370	23.4	6.8	2.5	chr11	35530708	35530898	(99555724)	+	MIRb	SINE/MIR	3	201	(61)	626888
468	34.7	5.3	1.4	chr11	35630218	35630433	(99456189)	C	MamRep38	DNA/hAT	(19)	276	52	627071
18	3.7	0.0	6.2	chr11	35662600	35662631	(99423991)	+	(TCC)n	Simple_repeat	1	32	(0)	627134
738	30.1	16.4	0.4	chr11	35794792	35795503	(99291119)	C	L2a	LINE/L2	(0)	3426	2583	627329
13	24.9	2.0	2.0	chr11	35796707	35796755	(99289867)	+	A-rich	Low_complexity	1	50	(0)	627332
298	24.3	15.8	7.0	chr11	35796922	35797036	(99289586)	+	L1M5	LINE/L1	5497	5623	(501)	627333
4603	15.0	1.4	0.3	chr11	36012107	36012830	(99073792)	C	MER44C	DNA/TcMar-Tigger	(1)	732	1	627706
30	14.9	1.4	4.1	chr11	36149834	36149905	(98936717)	+	(CTCATGA)n	Simple_repeat	1	73	(0)	627946
38	0.0	0.0	0.0	chr11	36165945	36165979	(98920643)	+	(CCTC)n	Simple_repeat	1	35	(0)	627976
27	15.6	0.0	4.8	chr11	36165980	36166042	(98920580)	+	(TCCT)n	Simple_repeat	1	63	(0)	627977
671	25.5	11.8	1.7	chr11	36748668	36748902	(98337720)	C	MIR	SINE/MIR	(0)	262	1	628886
588	19.4	0.3	0.2	chr11	36774446	36774552	(98312070)	C	FLAM_C	SINE/Alu	(44)	89	1	628943
21567	10.6	1.5	0.2	chr11	37788406	37792388	(97294234)	C	L1PB1	LINE/L1	(2)	6149	2114	630338
654	34.2	4.0	3.7	chr11	40329364	40329715	(94756907)	+	L3	LINE/CR1	3655	4007	(92)	633754
199	26.4	6.7	10.1	chr11	44569382	44569520	(90517102)	+	MIR3	SINE/MIR	6	139	(129)	640379
251	25.0	2.6	1.3	chr11	44862253	44862329	(90224293)	+	Charlie15b	DNA/hAT-Charlie	982	1059	(2)	640999
462	22.6	3.6	0.0	chr11	44862530	44862635	(90223987)	C	L2a	LINE/L2	(0)	3426	3317	641000
25	24.9	2.7	0.0	chr11	45093558	45093630	(89992992)	+	(CAC)n	Simple_repeat	1	75	(0)	641488
15	16.9	2.9	2.8	chr11	46294912	46294946	(88791676)	+	(CT)n	Simple_repeat	1	36	(0)	643699
183	26.1	3.0	8.4	chr11	47004795	47004865	(88081757)	+	L2	LINE/L2	457	523	(2896)	645072
17	22.2	0.0	0.0	chr11	47767169	47767210	(87319412)	+	(GTCCGG)n	Simple_repeat	1	42	(0)	646695
20	12.1	0.0	0.0	chr11	47767335	47767370	(87319252)	+	(GGGCGCT)n	Simple_repeat	1	36	(0)	646696
1766	18.0	2.8	7.4	chr11	57072165	57072571	(78014051)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	652978
20	17.6	1.8	3.6	chr11	57324777	57324831	(77761791)	+	(CCCCGC)n	Simple_repeat	1	56	(0)	653465
27	8.3	0.0	0.0	chr11	57324891	57324929	(77761693)	+	(CCG)n	Simple_repeat	1	39	(0)	653466
47	0.0	0.0	0.0	chr11	58628107	58628146	(76458476)	+	(TG)n	Simple_repeat	1	40	(0)	655747
15	18.3	0.0	2.6	chr11	59706870	59706908	(75379714)	+	A-rich	Low_complexity	1	39	(0)	657271
3242	8.6	0.2	0.0	chr11	59706910	59707327	(75379295)	+	LTR3	LTR/ERVK	5	423	(9)	657272
240	29.2	0.0	1.5	chr11	60906807	60906872	(74179750)	C	MER5A	DNA/hAT-Charlie	(3)	186	122	659082
12	17.5	3.1	0.0	chr11	61827628	61827659	(73258963)	+	(CCCG)n	Simple_repeat	1	33	(0)	660908
18	12.4	0.0	2.7	chr11	62398624	62398660	(72687962)	+	(TCCCC)n	Simple_repeat	1	37	(0)	661989
1866	11.4	0.0	13.7	chr11	62398887	62399228	(72687394)	+	AluSq2	SINE/Alu	1	295	(18)	661990
613	31.5	8.6	0.0	chr11	62400599	62400811	(72685811)	C	MIRc	SINE/MIR	(30)	238	6	661993
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
11	34.9	1.4	1.4	chr11	62601572	62601641	(72484981)	+	(CCGCCG)n	Simple_repeat	1	71	(0)	662388
13	22.1	2.7	0.0	chr11	62646561	62646597	(72440025)	+	(CCG)n	Simple_repeat	1	38	(0)	662469
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1936	8.1	6.5	0.0	chr11	62653500	62653758	(72432864)	+	AluSx	SINE/Alu	1	277	(35)	662482
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
11	10.0	5.6	5.3	chr11	63681455	63681490	(71405132)	+	(CGCGCT)n	Simple_repeat	1	38	(0)	664163
192	38.9	3.1	2.3	chr11	64854974	64855102	(70231520)	+	MIRb	SINE/MIR	100	229	(39)	666342
513	28.2	14.3	0.6	chr11	65382621	65383056	(69703566)	+	L2b	LINE/L2	2847	3374	(1)	667450
238	19.4	7.5	0.0	chr11	65428532	65428593	(69658029)	+	MamRep4096	DNA/hAT-Tip100	68	134	(292)	667514
505	31.0	12.1	3.3	chr11	65429593	65429862	(69656760)	C	L1ME4a	LINE/L1	(891)	5255	4959	667515
339	26.9	7.7	1.2	chr11	65430028	65430148	(69656474)	+	MIRb	SINE/MIR	31	156	(112)	667517
932	28.8	8.7	0.9	chr11	65434228	65434843	(69651779)	C	L1ME3G	LINE/L1	(20)	904	206	667526
252	30.3	7.7	1.5	chr11	65437459	65437592	(69649030)	C	L1M4	LINE/L1	(1335)	4811	4669	667529
48	0.0	0.0	0.0	chr11	65472426	65472466	(69614156)	+	(GT)n	Simple_repeat	1	41	(0)	667604
2317	9.0	0.7	0.3	chr11	65494195	65494493	(69592129)	C	AluSc	SINE/Alu	(8)	301	2	667656
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
321	32.7	6.7	2.9	chr11	65892042	65892189	(69194433)	C	MIRc	SINE/MIR	(77)	191	34	668361
240	31.1	3.2	0.0	chr11	65903442	65903531	(69183091)	+	MIRb	SINE/MIR	38	130	(138)	668393
22	24.2	1.9	6.5	chr11	65919124	65919228	(69167394)	+	G-rich	Low_complexity	1	107	(0)	668433
228	18.5	3.6	0.0	chr11	66015553	66015606	(69071016)	+	L2b	LINE/L2	3317	3372	(3)	668651
182	35.1	6.8	3.8	chr11	66119755	66119911	(68966711)	+	MIR3	SINE/MIR	23	184	(24)	668867
205	27.3	2.5	10.5	chr11	66330236	66330321	(68756301)	C	L2b	LINE/L2	(1)	3374	3296	669259
281	30.2	3.6	3.6	chr11	66510821	66510930	(68575692)	C	MIRc	SINE/MIR	(129)	139	30	669682
2417	6.0	0.0	3.3	chr11	66892566	66892867	(68193755)	+	AluSg4	SINE/Alu	2	293	(17)	670434
1021	11.2	1.3	0.7	chr11	67316952	67317103	(67769519)	C	AluSx	SINE/Alu	(159)	153	1	671396
284	27.4	17.1	1.9	chr11	67317104	67317207	(67769415)	C	MIR3	SINE/MIR	(56)	152	30	671397
13	18.6	3.6	6.9	chr11	67374065	67374120	(67712502)	+	(CCT)n	Simple_repeat	1	58	(0)	671520
21	14.4	1.6	6.5	chr11	68028071	68028131	(67058491)	+	(CCTCCCT)n	Simple_repeat	1	62	(0)	672644
301	33.3	2.2	4.8	chr11	68028258	68028394	(67058228)	+	MIR	SINE/MIR	30	162	(100)	672645
324	29.5	4.7	1.4	chr11	68354691	68354830	(66731792)	+	MIRb	SINE/MIR	33	174	(56)	673260
12	12.3	5.1	4.9	chr11	69321834	69321872	(65764750)	+	(CAGCCCC)n	Simple_repeat	1	41	(0)	674897
20	28.3	1.2	3.5	chr11	71929056	71929062	(63157560)	+	(GTGGAG)n	Simple_repeat	1	12	(75)	678991
15	22.5	0.0	2.3	chr11	71929063	71929105	(63157517)	+	(TGG)n	Simple_repeat	1	43	(0)	678992
20	28.3	1.2	3.5	chr11	71929106	71929141	(63157481)	+	(GTGGAG)n	Simple_repeat	13	87	(0)	678991
15	10.7	0.0	5.9	chr11	72238056	72238089	(62848533)	+	G-rich	Low_complexity	1	34	(0)	679593
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
17	24.0	3.3	1.6	chr11	73761468	73761528	(61325094)	+	G-rich	Low_complexity	1	63	(0)	682609
197	31.1	1.0	4.6	chr11	74319245	74319352	(60767270)	+	L2b	LINE/L2	2930	3033	(342)	683837
1821	16.4	2.1	0.0	chr11	74319511	74319790	(60766832)	+	AluJr	SINE/Alu	1	286	(26)	683838
1053	13.3	7.5	0.1	chr11	74592208	74592434	(60494188)	+	MER44A	DNA/TcMar-Tigger	1	248	(91)	684428
2343	7.8	0.3	1.4	chr11	76007914	76008209	(59078413)	C	AluY	SINE/Alu	(18)	293	1	687190
16	27.2	1.5	3.0	chr11	76380912	76380976	(58705646)	+	G-rich	Low_complexity	1	66	(0)	687899
14	30.3	0.0	1.9	chr11	76381067	76381120	(58705502)	+	(CCG)n	Simple_repeat	1	54	(0)	687900
180	28.8	16.5	2.6	chr11	76444188	76444301	(58642321)	+	MIRb	SINE/MIR	121	253	(15)	688049
271	31.4	7.8	0.8	chr11	76598483	76598601	(58488021)	+	MIRb	SINE/MIR	68	195	(73)	688299
1368	19.7	4.6	0.6	chr11	76598717	76599027	(58487595)	+	MER33	DNA/hAT-Charlie	1	324	(0)	688300
509	29.7	5.4	3.2	chr11	77287551	77287766	(57798856)	+	MIRc	SINE/MIR	29	249	(19)	689553
292	31.2	3.8	4.3	chr11	77287880	77288040	(57798582)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	350	689554
358	15.7	9.4	4.4	chr11	77407550	77407657	(57678965)	C	MIRc	SINE/MIR	(6)	262	139	689806
808	26.5	5.7	0.0	chr11	77602442	77602641	(57483981)	+	Tigger12c	DNA/TcMar-Tigger	7	218	(516)	690234
24	19.8	0.0	0.0	chr11	79018437	79018482	(56068140)	+	(CA)n	Simple_repeat	1	46	(0)	693089
440	22.5	5.1	6.5	chr11	79087145	79087282	(55999340)	C	MIRc	SINE/MIR	(113)	155	20	693234
12	11.6	3.3	3.2	chr11	79087544	79087573	(55999049)	+	A-rich	Low_complexity	1	31	(0)	693235
284	24.0	10.3	2.0	chr11	79414874	79414971	(55671651)	+	MamRep434	DNA/TcMar-Tigger	5	111	(315)	693884
411	28.2	8.9	2.1	chr11	79414974	79415159	(55671463)	+	MIR3	SINE/MIR	3	199	(9)	693885
610	25.7	4.5	1.9	chr11	85665299	85665559	(49421063)	C	L1MC4	LINE/L1	(93)	7949	7741	704168
2400	10.2	0.0	0.0	chr11	85709679	85709982	(49376640)	C	AluSz	SINE/Alu	(8)	304	1	704246
698	26.2	2.8	1.9	chr11	85815524	85815737	(49270885)	C	MIRc	SINE/MIR	(5)	263	48	704430
35	0.0	0.0	0.0	chr11	85961856	85961888	(49124734)	+	(TATT)n	Simple_repeat	1	33	(0)	704687
310	29.3	8.5	12.8	chr11	86116742	86116976	(48969646)	+	MIRb	SINE/MIR	45	268	(0)	704950
12	13.4	3.2	10.9	chr11	86174201	86174262	(48912360)	+	(CTGGCTC)n	Simple_repeat	1	64	(0)	705080
240	19.0	1.7	6.5	chr11	86174357	86174418	(48912204)	C	CR1-3_Croc	LINE/CR1	(2)	3603	3545	705081
16	13.2	0.0	0.0	chr11	86245010	86245034	(48841588)	+	(CG)n	Simple_repeat	1	25	(0)	705223
15	26.8	3.3	1.6	chr11	86245077	86245136	(48841486)	+	(CGG)n	Simple_repeat	1	62	(0)	705224
341	28.8	14.6	0.9	chr11	86301816	86302017	(48784605)	+	MIRb	SINE/MIR	16	257	(11)	705331
595	29.2	3.4	1.7	chr11	88555016	88555189	(46531433)	+	MIRb	SINE/MIR	9	185	(83)	708756
438	24.8	0.0	9.2	chr11	88555211	88555330	(46531292)	+	MER5A	DNA/hAT-Charlie	6	114	(75)	708757
2059	17.1	3.5	3.0	chr11	93055267	93055378	(42031244)	C	MER95	LTR/ERV1	(0)	431	320	715061
24	20.3	2.0	0.0	chr11	93197514	93197564	(41889058)	+	(CA)n	Simple_repeat	1	52	(0)	715243
2087	8.2	0.0	12.9	chr11	93661104	93661445	(41425177)	C	AluJb	SINE/Alu	(14)	298	1	715957
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
452	10.1	11.5	0.0	chr11	94933187	94933255	(40153367)	+	MADE1	DNA/TcMar-Mariner	1	78	(2)	717870
661	28.3	1.0	5.4	chr11	94933505	94933742	(40152880)	C	MIRc	SINE/MIR	(42)	226	1	717871
267	28.6	1.3	1.3	chr11	95147857	95147934	(39938688)	+	L3	LINE/CR1	4017	4094	(5)	718195
205	23.9	4.2	0.0	chr11	95231754	95231799	(39854823)	C	AmnSINE1	SINE/5S-Deu-L2	(16)	559	512	718310
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
33	0.0	0.0	0.0	chr11	95877333	95877363	(39209259)	+	(T)n	Simple_repeat	1	31	(0)	719267
2358	16.7	3.6	2.8	chr11	95877508	95877969	(39208653)	+	MLT1C	LTR/ERVL-MaLR	1	466	(1)	719268
332	32.4	7.9	0.6	chr11	96056007	96056167	(39030455)	+	MIR3	SINE/MIR	2	184	(24)	719548
16	0.0	0.0	0.0	chr11	96056389	96056406	(39030216)	+	(A)n	Simple_repeat	1	18	(0)	719549
659	25.4	1.1	4.1	chr11	96145011	96145241	(38941381)	C	MIRc	SINE/MIR	(2)	266	43	719697
336	22.3	8.2	0.0	chr11	96145537	96145627	(38940995)	+	MIRc	SINE/MIR	11	105	(157)	719698
15	4.3	4.2	0.0	chr11	96156274	96156297	(38930325)	+	(CCT)n	Simple_repeat	1	25	(0)	719718
237	26.2	1.2	6.7	chr11	96156820	96156909	(38929713)	+	Charlie14a	DNA/hAT-Charlie	673	757	(409)	719719
666	26.9	12.2	1.8	chr11	96310961	96311187	(38775435)	C	MIRb	SINE/MIR	(3)	259	6	719957
1251	31.3	9.1	5.1	chr11	97937551	97938747	(37147875)	+	L1ME3D	LINE/L1	159	1407	(4835)	721829
14537	19.0	1.9	0.5	chr11	97965942	97968669	(37117953)	C	HUERS-P3-int	LTR/ERV1	(2391)	6528	4009	721865
522	28.4	2.6	1.8	chr11	102011191	102011419	(33075203)	+	LTR16A	LTR/ERVL	21	251	(200)	727193
880	26.7	5.7	2.8	chr11	102011424	102011822	(33074800)	+	L1M5	LINE/L1	4333	4739	(1407)	727194
209	30.0	0.0	0.0	chr11	102760300	102760349	(32326273)	C	MIR3	SINE/MIR	(48)	160	111	728438
15	22.0	4.5	0.0	chr11	102760599	102760642	(32325980)	+	(CAT)n	Simple_repeat	1	46	(0)	728439
2171	23.5	13.5	1.3	chr11	103524814	103525606	(31561016)	C	L1MC3	LINE/L1	(4)	7781	6877	729569
1383	17.4	1.1	0.4	chr11	103625043	103625287	(31461335)	C	MER31A	LTR/ERV1	(0)	485	239	729700
2662	15.5	3.8	3.8	chr11	103625288	103625818	(31460804)	+	LTR26C	LTR/ERV1	1	531	(8)	729701
4527	13.4	8.4	0.3	chr11	103651762	103652512	(31434110)	+	LTR8B	LTR/ERV1	2	819	(1)	729749
2937	16.9	3.8	3.9	chr11	106389174	106389734	(28696888)	C	LTR8B	LTR/ERV1	(260)	560	1	733494
698	28.9	5.6	1.0	chr11	106399540	106399745	(28686877)	+	MIRb	SINE/MIR	8	223	(45)	733509
312	31.1	6.8	9.0	chr11	107043991	107044202	(28042420)	C	L3	LINE/CR1	(273)	3826	3620	734365
450	33.8	7.4	0.4	chr11	107695999	107696236	(27390386)	C	MIRb	SINE/MIR	(9)	259	4	735331
212	37.6	7.6	0.0	chr11	109034579	109034663	(26051959)	C	MIR3	SINE/MIR	(74)	134	43	737780
781	27.3	19.4	2.9	chr11	109320518	109320892	(25765730)	+	LTR16A1	LTR/ERVL	19	456	(0)	738156
1765	16.7	2.7	3.3	chr11	111794285	111794583	(23292039)	C	AluJr	SINE/Alu	(15)	297	1	741960
319	34.5	11.5	3.1	chr11	112157446	112157762	(22928860)	C	L2c	LINE/L2	(37)	3350	3004	742661
586	28.1	15.1	5.3	chr11	112318335	112318379	(22768243)	C	HAL1ME	LINE/L1	(732)	1775	1729	742948
2984	19.3	0.5	1.2	chr11	112318380	112318940	(22767682)	+	MER89	LTR/ERV1	1	557	(2)	742949
227	25.9	1.8	10.0	chr11	112657529	112657648	(22428974)	C	L3b	LINE/CR1	(153)	5079	4970	743456
3340	12.3	3.6	1.7	chr11	114294851	114295386	(20791236)	C	LTR35A	LTR/ERV1	(0)	547	1	746037
2521	6.7	0.0	1.6	chr11	114295417	114295728	(20790894)	C	AluY	SINE/Alu	(4)	307	1	746038
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
201	30.8	13.0	2.2	chr11	118619336	118619490	(16467132)	+	MIR3	SINE/MIR	16	199	(31)	753247
12	3.9	3.1	9.1	chr11	118909223	118909254	(16177368)	+	(GGCA)n	Simple_repeat	1	33	(0)	753850
896	23.7	3.9	1.3	chr11	119595040	119595266	(15491356)	+	HAL1	LINE/L1	603	835	(1672)	755140
209	27.3	13.5	2.5	chr11	119615540	119615618	(15471004)	+	MamTip2	DNA/hAT-Tip100	47	135	(170)	755190
483	32.0	6.6	3.4	chr11	119615749	119615981	(15470641)	C	MIRc	SINE/MIR	(1)	267	27	755191
416	22.2	10.0	1.6	chr11	120295139	120295266	(14791356)	+	UCON97	DNA	172	311	(0)	756307
3159	18.4	1.8	0.4	chr11	120331107	120331661	(14754961)	C	MER68	LTR/ERVL	(0)	563	1	756384
214	24.1	1.8	0.0	chr11	121464895	121464948	(13621674)	+	L3b	LINE/CR1	4993	5047	(185)	758159
2007	13.0	1.4	4.0	chr11	121519969	121520268	(13566354)	+	AluJb	SINE/Alu	1	292	(20)	758244
1938	15.3	1.2	1.2	chr11	121520269	121520599	(13566023)	+	L1MB5	LINE/L1	5819	6149	(25)	758245
12	29.9	0.0	0.0	chr11	122101714	122101752	(12984870)	+	GA-rich	Low_complexity	1	39	(0)	759086
389	33.2	13.2	1.6	chr11	122196762	122197009	(12889613)	+	L2c	LINE/L2	3104	3384	(3)	759228
375	28.3	2.9	9.3	chr11	122642386	122642568	(12444054)	C	MARNA	DNA/TcMar-Mariner	(3)	583	413	759937
14	12.0	0.0	3.5	chr11	122655915	122655943	(12430679)	+	(CGC)n	Simple_repeat	1	29	(0)	759975
47	0.0	0.0	3.2	chr11	123118920	123118981	(11967641)	+	(TTTC)n	Simple_repeat	1	62	(0)	760884
367	25.8	15.3	1.3	chr11	123173595	123173751	(11912871)	+	MIRb	SINE/MIR	82	264	(4)	761008
1256	20.3	5.7	5.1	chr11	123174955	123175149	(11911473)	C	AluJo	SINE/Alu	(13)	299	110	761010
17	24.0	0.0	0.0	chr11	123590573	123590616	(11496006)	+	(TCCC)n	Simple_repeat	1	44	(0)	761830
31	20.8	0.0	0.0	chr11	123741468	123741535	(11345087)	+	(CCCGG)n	Simple_repeat	1	68	(0)	762084
13	13.2	6.1	0.0	chr11	124673756	124673788	(10412834)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	763397
304	37.6	3.7	1.3	chr11	126113638	126113796	(8972826)	+	MIRb	SINE/MIR	63	225	(43)	765533
2335	7.2	1.0	0.3	chr11	126302899	126303190	(8783432)	C	AluSc	SINE/Alu	(15)	294	1	765861
26	6.5	0.0	0.0	chr11	126303318	126303350	(8783272)	+	(A)n	Simple_repeat	1	33	(0)	765862
401	30.4	6.6	3.9	chr11	126585959	126586136	(8500486)	+	AmnSINE1	SINE/5S-Deu-L2	313	495	(80)	766326
226	28.4	5.9	2.1	chr11	126991965	126992061	(8094561)	+	MIRc	SINE/MIR	166	266	(2)	766903
263	31.0	5.8	5.2	chr11	126992236	126992371	(8094251)	C	L3	LINE/CR1	(7)	4092	3956	766904
317	36.1	8.1	2.5	chr11	128174346	128174507	(6912115)	C	L3	LINE/CR1	(31)	4068	3897	768543
766	28.9	9.0	2.5	chr11	128208283	128208749	(6877873)	+	MLT1H	LTR/ERVL-MaLR	5	549	(0)	768596
402	24.6	3.0	3.7	chr11	128399438	128399572	(6687050)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	768884
236	31.1	7.6	6.2	chr11	128399717	128399846	(6686776)	+	MIR	SINE/MIR	41	172	(90)	768885
18	0.0	0.0	0.0	chr11	128401091	128401110	(6685512)	+	(A)n	Simple_repeat	1	20	(0)	768888
2958	20.3	6.6	2.7	chr11	129143290	129143992	(5942630)	+	MER44C	DNA/TcMar-Tigger	2	733	(0)	769889
911	30.6	11.8	2.7	chr11	129846523	129847076	(5239546)	C	L2a	LINE/L2	(0)	3426	2811	770889
3241	19.0	10.9	0.8	chr11	130847636	130848293	(4238329)	+	MER44C	DNA/TcMar-Tigger	1	733	(0)	772498
32	3.2	0.0	0.0	chr11	130897374	130897405	(4189217)	+	(AC)n	Simple_repeat	1	32	(0)	772550
976	22.7	12.3	0.0	chr11	132024319	132024604	(3062018)	C	MER2	DNA/TcMar-Tigger	(7)	338	6	774131
295	26.1	0.0	1.4	chr11	132024893	132024962	(3061660)	C	MLT1I	LTR/ERVL-MaLR	(7)	404	336	774132
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
45	25.6	3.8	4.5	chr12	991143	991354	(132283955)	+	(CGG)n	Simple_repeat	1	220	(0)	779868
1227	15.9	0.0	0.0	chr12	1457739	1457920	(131817389)	+	AluJb	SINE/Alu	129	310	(2)	780696
245	14.6	5.3	1.4	chr12	2267553	2267648	(131007661)	C	MIRc	SINE/MIR	(54)	154	58	781958
16	0.0	0.0	0.0	chr12	2284294	2284310	(130990999)	+	(T)n	Simple_repeat	1	17	(0)	781979
231	34.3	6.6	1.0	chr12	2284555	2284654	(130990655)	+	MIRc	SINE/MIR	160	265	(3)	781980
320	31.2	5.4	3.8	chr12	5166889	5167066	(128108243)	C	MIRc	SINE/MIR	(14)	194	19	786628
347	29.7	5.0	4.5	chr12	6167628	6167831	(127107478)	+	MIRb	SINE/MIR	15	224	(44)	788154
12	22.5	2.7	0.0	chr12	6167868	6167904	(127107405)	+	(GGTGGC)n	Simple_repeat	1	38	(0)	788155
187	29.2	12.4	7.8	chr12	6167939	6168053	(127107256)	C	MIR	SINE/MIR	(114)	148	28	788156
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
226	33.8	11.8	2.8	chr12	6538722	6538937	(126736372)	+	MIR	SINE/MIR	15	252	(10)	788908
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
14	13.2	4.3	6.1	chr12	6689168	6689214	(126586095)	+	GA-rich	Low_complexity	1	49	(0)	789181
15	19.6	5.1	2.0	chr12	6764579	6764639	(126510670)	+	GA-rich	Low_complexity	1	62	(0)	789348
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
2337	9.4	0.3	0.0	chr12	7860794	7861090	(125414219)	C	AluSp	SINE/Alu	(14)	299	2	791229
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
15	24.0	3.2	3.1	chr12	12612098	12612159	(120663150)	+	G-rich	Low_complexity	1	64	(0)	798444
39	0.0	0.0	0.0	chr12	12696340	12696375	(120578934)	+	(T)n	Simple_repeat	1	36	(0)	798590
3837	14.9	2.3	0.3	chr12	12758646	12759249	(120516060)	C	Tigger7	DNA/TcMar-Tigger	(1874)	617	2	798717
956	15.4	7.6	0.0	chr12	12759258	12759439	(120515870)	C	HAL1M8	LINE/L1	(465)	2526	2330	798718
2551	15.0	10.8	0.4	chr12	14836103	14836591	(118438718)	C	Tigger7	DNA/TcMar-Tigger	(1945)	546	1	801991
965	25.4	3.6	0.8	chr12	15278752	15278993	(117996316)	C	MIR	SINE/MIR	(8)	254	6	802582
1638	17.7	8.0	2.8	chr12	15404812	15405165	(117870144)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	802744
491	20.4	8.5	2.7	chr12	15684938	15685048	(117590261)	C	MER63B	DNA/hAT-Blackjack	(0)	436	319	803136
410	25.9	6.3	4.4	chr12	15685170	15685365	(117589944)	+	MIRc	SINE/MIR	30	236	(32)	803137
1151	25.4	18.3	3.4	chr12	15757801	15758298	(117517011)	C	MLT1G3	LTR/ERVL-MaLR	(6)	589	1	803256
390	18.1	5.4	0.0	chr12	15758299	15758403	(117516906)	+	L1MC4	LINE/L1	7481	7591	(451)	803253
1195	24.2	4.1	1.5	chr12	15796610	15796940	(117478369)	C	MER58B	DNA/hAT-Charlie	(1)	340	1	803301
15	18.9	3.2	6.2	chr12	15797006	15797067	(117478242)	+	(TTTAAT)n	Simple_repeat	1	64	(0)	803302
2375	9.7	0.3	0.7	chr12	15797090	15797399	(117477910)	+	AluSx3	SINE/Alu	2	310	(1)	803303
443	30.7	2.4	1.2	chr12	19273827	19273994	(114001315)	C	MIR	SINE/MIR	(65)	197	28	807826
395	24.1	0.0	0.0	chr12	19274018	19274100	(114001209)	C	MamRep605	LTR?	(392)	457	375	807825
364	25.2	5.8	5.8	chr12	19274142	19274280	(114001029)	C	MamRep605	LTR?	(687)	162	24	807825
31	16.6	1.4	1.4	chr12	19439369	19439437	(113835872)	+	G-rich	Low_complexity	1	70	(0)	808198
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
2747	3.3	0.0	0.3	chr12	21658158	21658464	(111616845)	C	AluYf1	SINE/Alu	(5)	306	1	811058
186	25.4	0.0	3.5	chr12	22283002	22283058	(110992251)	+	L3	LINE/CR1	2948	3002	(1097)	811903
1705	22.1	6.8	8.7	chr12	23084558	23085053	(110190256)	+	MLT1H	LTR/ERVL-MaLR	14	499	(50)	813133
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
386	35.6	11.7	2.3	chr12	25458376	25458677	(107816632)	+	L2c	LINE/L2	3042	3375	(12)	816543
478	29.2	2.6	6.6	chr12	25693867	25694064	(107581245)	+	MIR	SINE/MIR	9	198	(64)	816837
2235	16.9	1.0	0.5	chr12	25694065	25694456	(107580853)	+	Tigger7	DNA/TcMar-Tigger	1	394	(2097)	816838
271	29.9	10.3	3.1	chr12	26010371	26010532	(107264777)	+	MER96	DNA/hAT-Tip100	1	175	(0)	817381
18	23.2	0.0	3.7	chr12	26153320	26153373	(107121936)	+	(TAT)n	Simple_repeat	1	54	(0)	817580
614	24.7	6.2	0.0	chr12	26153380	26153561	(107121748)	+	L2a	LINE/L2	3230	3423	(3)	817578
776	30.5	9.8	5.9	chr12	26153598	26154256	(107121053)	C	MamGypsy2-I	LTR/Gypsy	(1525)	2641	1955	817581
846	27.5	0.9	0.0	chr12	26188035	26188245	(107087064)	C	MIR	SINE/MIR	(36)	226	14	817635
339	27.9	12.5	2.8	chr12	26374606	26374749	(106900560)	C	MIRb	SINE/MIR	(14)	254	95	817878
17	33.0	0.0	1.8	chr12	26937983	26938039	(106337270)	+	(GC)n	Simple_repeat	1	57	(0)	818728
1667	17.9	1.9	3.5	chr12	27573704	27574016	(105701293)	+	AluJo	SINE/Alu	4	311	(1)	819775
221	20.7	3.3	7.5	chr12	27574118	27574211	(105701098)	+	AmnSINE1	SINE/5S-Deu-L2	61	150	(425)	819776
1785	16.7	4.6	0.3	chr12	27619133	27619462	(105655847)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	819853
281	23.4	19.6	0.9	chr12	27619604	27619711	(105655598)	+	L2a	LINE/L2	2510	2642	(777)	819854
2638	19.1	1.4	6.1	chr12	28023352	28023807	(105251502)	C	MLT1F2	LTR/ERVL-MaLR	(121)	439	7	820489
288	24.7	8.8	1.1	chr12	29279129	29279222	(103996087)	C	LTR85a	LTR/Gypsy?	(97)	605	504	822168
2241	12.6	0.8	1.9	chr12	29317132	29317496	(103957813)	+	Tigger4b	DNA/TcMar-Tigger	1	361	(0)	822219
195	20.6	12.8	9.3	chr12	31519080	31519154	(101756155)	+	L3b	LINE/CR1	4272	4349	(883)	825440
2273	10.6	1.6	0.0	chr12	31733484	31733785	(101541524)	C	AluSx	SINE/Alu	(5)	307	1	825922
4527	8.9	6.1	2.7	chr12	31733786	31734288	(101541021)	C	LTR8	LTR/ERV1	(166)	525	1	825921
1815	22.1	10.0	4.2	chr12	31749069	31749596	(101525713)	C	LTR8B	LTR/ERV1	(0)	820	259	825964
328	24.4	14.0	0.0	chr12	31749593	31749678	(101525631)	C	PrimLTR79	LTR/ERV1	(202)	301	202	825965
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
32	0.0	0.0	0.0	chr12	34022251	34022280	(99253029)	+	(T)n	Simple_repeat	1	30	(0)	829732
1361	29.9	13.7	1.2	chr12	45273963	45275052	(88000257)	+	L2a	LINE/L2	2064	3327	(99)	840601
3042	14.6	7.8	4.1	chr12	45283930	45284557	(87990752)	C	MER39B	LTR/ERV1	(0)	653	1	840614
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
17	5.0	0.0	0.0	chr12	46219952	46219972	(87055337)	+	(CA)n	Simple_repeat	1	21	(0)	841980
593	25.9	1.5	0.0	chr12	46357086	46357220	(86918089)	C	FLAM_A	SINE/Alu	(5)	137	1	842148
313	25.8	3.8	9.2	chr12	46357773	46357913	(86917396)	+	MER5A	DNA/hAT-Charlie	35	167	(22)	842149
461	24.7	1.7	2.4	chr12	46430778	46430919	(86844390)	C	MIRb	SINE/MIR	(83)	185	44	842256
268	30.9	9.0	1.9	chr12	46555444	46555598	(86719711)	C	MIR1_Amn	SINE/MIR	(63)	167	1	842435
766	32.8	15.7	0.7	chr12	46664657	46665074	(86610235)	C	L3b	LINE/CR1	(4)	4095	3604	842547
212	35.2	3.6	3.6	chr12	46665129	46665240	(86610069)	C	L3b	LINE/CR1	(631)	4601	4500	842547
189	19.4	0.0	0.0	chr12	46942785	46942820	(86332489)	C	L2b	LINE/L2	(1)	3374	3339	842887
51	0.0	0.0	0.0	chr12	46943000	46943043	(86332266)	+	(GT)n	Simple_repeat	1	44	(0)	842888
274	28.8	10.1	9.6	chr12	47014974	47015098	(86260211)	+	MIRc	SINE/MIR	33	168	(100)	842986
695	20.0	1.6	0.0	chr12	47015099	47015223	(86260086)	+	FLAM_A	SINE/Alu	4	130	(12)	842987
14	26.8	1.3	6.4	chr12	47820670	47820746	(85454563)	+	(CCCTCC)n	Simple_repeat	1	78	(0)	844249
2403	5.2	1.0	2.6	chr12	48717145	48717452	(84557857)	+	AluSx3	SINE/Alu	1	303	(8)	845624
12	15.3	3.5	0.0	chr12	48957329	48957357	(84317952)	+	(CGC)n	Simple_repeat	1	30	(0)	846157
1943	11.1	7.2	0.0	chr12	49183399	49183669	(84091640)	C	AluSc8	SINE/Alu	(19)	292	1	846611
360	6.8	0.0	0.0	chr12	49183670	49183713	(84091596)	+	THE1D	LTR/ERVL-MaLR	336	379	(2)	846612
2386	11.2	0.0	0.3	chr12	49222273	49222584	(84052725)	+	AluSq2	SINE/Alu	1	311	(2)	846713
41	16.1	0.0	0.0	chr12	49222708	49222777	(84052532)	+	GA-rich	Low_complexity	1	70	(0)	846714
889	12.6	4.0	0.0	chr12	49491433	49491551	(83783758)	+	AluJb	SINE/Alu	1	124	(188)	847313
413	29.0	6.4	0.0	chr12	49491598	49491728	(83783581)	+	MIRb	SINE/MIR	21	160	(108)	847314
2608	5.3	0.0	0.0	chr12	49503369	49503671	(83771638)	+	AluY	SINE/Alu	2	304	(7)	847336
263	31.2	0.0	2.1	chr12	49623056	49623150	(83652159)	+	L2a	LINE/L2	3333	3425	(1)	847519
17	20.5	0.0	9.5	chr12	49623347	49623420	(83651889)	+	G-rich	Low_complexity	1	74	(0)	847520
408	28.0	3.9	3.2	chr12	49843240	49843394	(83431915)	C	MIRb	SINE/MIR	(27)	241	86	847909
30	0.0	0.0	0.0	chr12	50192979	50193004	(83082305)	+	(TG)n	Simple_repeat	1	26	(0)	848622
2331	10.4	0.0	0.3	chr12	50201617	50201925	(83073384)	+	AluSq	SINE/Alu	3	310	(3)	848644
1067	14.0	0.0	1.3	chr12	50246990	50247139	(83028170)	+	FRAM	SINE/Alu	1	148	(28)	848752
1136	22.5	7.9	4.2	chr12	50247163	50247599	(83027710)	+	MLT1G1	LTR/ERVL-MaLR	10	513	(66)	848753
419	31.6	8.1	10.8	chr12	51371382	51371515	(81903794)	+	L2	LINE/L2	2942	3073	(346)	851224
12	15.5	3.5	0.0	chr12	52147359	52147387	(81127922)	+	G-rich	Low_complexity	1	30	(0)	852516
18	24.0	3.5	4.5	chr12	53452258	53452342	(79822967)	+	(CCGC)n	Simple_repeat	1	88	(0)	854798
13	19.5	8.3	1.5	chr12	55829559	55829618	(77445691)	+	(CTCCCGG)n	Simple_repeat	1	65	(0)	858322
18	22.4	1.3	6.5	chr12	55829619	55829629	(77445680)	+	(CCGCCT)n	Simple_repeat	6	77	(0)	858323
13	13.2	0.0	0.0	chr12	55974045	55974069	(77301240)	+	(GAG)n	Simple_repeat	1	25	(0)	858642
12	25.4	1.6	6.2	chr12	56007537	56007599	(77267710)	+	(GCC)n	Simple_repeat	1	64	(0)	858708
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
13	23.1	0.0	0.0	chr12	56152593	56152628	(77122681)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	858986
34	0.0	0.0	2.9	chr12	56152690	56152723	(77122586)	+	(GT)n	Simple_repeat	1	34	(0)	858987
2005	10.7	0.0	0.4	chr12	56464543	56464803	(76810506)	+	AluSz	SINE/Alu	41	300	(12)	859593
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
17	15.4	0.0	2.6	chr12	57520767	57520804	(75754505)	+	GA-rich	Low_complexity	1	38	(0)	861459
12	11.9	2.3	8.9	chr12	57520866	57520909	(75754400)	+	G-rich	Low_complexity	1	45	(0)	861460
11	34.6	2.9	0.0	chr12	57547085	57547153	(75728156)	+	G-rich	Low_complexity	1	71	(0)	861491
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
252	27.1	2.0	4.0	chr12	57782459	57782558	(75492751)	+	MIRc	SINE/MIR	168	265	(3)	861818
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
17	13.1	0.0	0.0	chr12	62785862	62785887	(70489422)	+	(A)n	Simple_repeat	1	26	(0)	868481
2440	20.4	4.1	1.3	chr12	64088982	64089523	(69185786)	+	MER74A	LTR/ERVL	1	558	(0)	870480
185	32.7	2.8	6.3	chr12	64181838	64181948	(69093361)	C	L3	LINE/CR1	(3111)	988	882	870618
188	30.6	5.3	0.0	chr12	64734184	64734255	(68541054)	+	MIR3	SINE/MIR	33	108	(100)	871720
360	35.8	11.6	0.4	chr12	65523535	65523778	(67751531)	+	MamRTE1	LINE/RTE-BovB	2438	2712	(1100)	872910
209	35.8	0.9	2.7	chr12	65524666	65524777	(67750532)	C	L2c	LINE/L2	(9)	3378	3269	872913
358	14.6	3.5	5.8	chr12	65524851	65524937	(67750372)	+	Charlie29a	DNA/hAT-Charlie	19	103	(616)	872914
476	22.1	0.8	1.6	chr12	65537026	65537149	(67738160)	+	MER125	DNA	5	127	(49)	872936
4214	12.6	0.0	0.2	chr12	65562000	65562626	(67712683)	+	MER41B	LTR/ERV1	1	626	(8)	872967
274	34.5	1.7	2.3	chr12	65609362	65609536	(67665773)	+	CR1-13_AMi	LINE/CR1	380	553	(171)	873041
783	17.3	7.5	0.1	chr12	65615728	65615896	(67659413)	C	MIR	SINE/MIR	(14)	248	75	873049
781	24.5	4.7	4.3	chr12	65642150	65642448	(67632861)	C	MLT1J	LTR/ERVL-MaLR	(211)	301	2	873103
461	30.6	9.7	1.1	chr12	65642544	65642731	(67632578)	C	L2c	LINE/L2	(556)	2863	2658	873101
184	35.3	6.0	5.0	chr12	65695650	65695831	(67579478)	C	LFSINE_Vert	SINE/tRNA	(15)	444	261	873188
233	20.0	0.0	4.3	chr12	65853750	65853796	(67421513)	+	MIRb	SINE/MIR	218	262	(6)	873453
1045	18.8	0.0	1.2	chr12	65967272	65967441	(67307868)	+	FAM	SINE/Alu	6	173	(12)	873595
194	36.5	0.0	0.0	chr12	67720666	67720728	(65554581)	C	MIRb	SINE/MIR	(202)	66	4	876327
360	35.7	5.6	2.6	chr12	67720907	67721096	(65554213)	C	MIR	SINE/MIR	(1)	261	66	876328
3948	12.6	5.5	6.6	chr12	67766080	67766778	(65508531)	+	LTR8	LTR/ERV1	1	691	(0)	876394
15	19.6	0.0	0.0	chr12	68915044	68915072	(64360237)	+	(T)n	Simple_repeat	1	29	(0)	878341
3371	18.8	6.8	3.5	chr12	69405174	69405880	(63869429)	C	MER44C	DNA/TcMar-Tigger	(0)	733	2	879208
1021	25.6	9.2	0.6	chr12	69405954	69406279	(63869030)	C	L1ME3G	LINE/L1	(327)	597	241	879209
869	16.0	0.8	0.0	chr12	69502403	69502533	(63772776)	C	FLAM_C	SINE/Alu	(11)	132	1	879412
440	26.9	12.5	2.7	chr12	69502559	69502745	(63772564)	C	L2a	LINE/L2	(6)	3420	3213	879413
222	38.2	4.8	5.7	chr12	75178525	75178735	(58096574)	+	MIRc	SINE/MIR	14	222	(46)	887182
507	24.8	8.9	2.5	chr12	75389022	75389178	(57886131)	+	MIR	SINE/MIR	64	231	(31)	887470
407	33.1	6.2	0.7	chr12	75389214	75389365	(57885944)	+	L2b	LINE/L2	3209	3369	(6)	887471
398	33.1	4.7	1.8	chr12	75389357	75389522	(57885787)	+	L3	LINE/CR1	3928	4098	(1)	887472
17	15.3	0.0	2.6	chr12	75446964	75447032	(57828277)	+	(AGAT)n	Simple_repeat	1	67	(0)	887548
310	33.6	11.8	1.3	chr12	75660171	75660396	(57614913)	C	L3b	LINE/CR1	(314)	4918	4666	887871
278	24.7	6.9	0.0	chr12	75767030	75767110	(57508199)	+	Charlie19a	DNA/hAT-Charlie	1	87	(299)	888054
735	29.5	8.1	2.7	chr12	75781344	75781839	(57493470)	+	LTR85a	LTR/Gypsy?	268	777	(7)	888081
282	30.8	6.1	5.3	chr12	75781872	75781984	(57493325)	+	MamTip2	DNA/hAT-Tip100	37	150	(155)	888082
453	31.0	5.1	3.5	chr12	75863165	75863475	(57411834)	+	LTR90A	LTR	20	335	(641)	888213
642	30.5	11.1	3.1	chr12	76182968	76183523	(57091786)	+	LTR78	LTR/ERV1	667	1304	(0)	888800
11581	14.6	2.7	0.8	chr12	76718859	76721514	(56553795)	+	L1M1	LINE/L1	14	3394	(4171)	889743
331	35.0	10.7	2.9	chr12	77214215	77214420	(56060889)	+	L3	LINE/CR1	3865	4088	(11)	890539
400	26.6	19.1	1.9	chr12	77924837	77925043	(55350266)	C	MIRc	SINE/MIR	(1)	267	17	891485
504	35.4	11.9	2.5	chr12	78398281	78398826	(54876483)	+	L2b	LINE/L2	2741	3335	(40)	892092
316	21.8	1.3	2.5	chr12	78398904	78398983	(54876326)	+	L3	LINE/CR1	3764	3842	(257)	892094
12	26.1	1.9	3.6	chr12	78399049	78399102	(54876207)	+	(AATA)n	Simple_repeat	1	55	(0)	892095
18	6.8	3.2	0.0	chr12	79897562	79897592	(53377717)	+	(AAAAC)n	Simple_repeat	1	32	(0)	894214
675	26.2	12.8	0.9	chr12	79983903	79984295	(53291014)	C	L2a	LINE/L2	(0)	3426	2877	894379
2215	9.0	3.5	0.0	chr12	80044568	80044684	(53230625)	C	AluSp	SINE/Alu	(196)	117	1	894479
796	25.1	2.5	3.7	chr12	80053183	80053426	(53221883)	C	L1MEi	LINE/L1	(1967)	245	5	894492
790	29.0	3.0	0.9	chr12	80053427	80053724	(53221585)	+	MER102c	DNA/hAT-Charlie	61	330	(1)	894493
375	28.6	2.5	4.0	chr12	80268963	80269086	(53006223)	+	MamRep137	DNA/TcMar-Tigger	102	223	(287)	894786
883	28.7	3.3	2.3	chr12	80269100	80269402	(53005907)	+	MamRep137	DNA/TcMar-Tigger	203	508	(2)	894787
180	36.7	3.9	3.0	chr12	80551925	80552025	(52723284)	+	L2c	LINE/L2	3052	3153	(234)	895141
327	35.1	0.0	1.1	chr12	80552033	80552127	(52723182)	+	MER5A	DNA/hAT-Charlie	71	164	(25)	895142
1322	26.9	8.0	2.3	chr12	84070102	84070649	(49204660)	C	L2a	LINE/L2	(4)	3422	2852	899830
1950	33.2	5.4	6.4	chr12	84070652	84072036	(49203273)	C	HERV16-int	LTR/ERVL	(2079)	2917	1486	899831
282	35.5	4.0	1.2	chr12	85626290	85626457	(47648852)	+	LTR78B	LTR/ERV1	1119	1291	(5)	901897
289	24.2	2.9	3.9	chr12	85963344	85963446	(47311863)	C	Charlie24	DNA/hAT-Charlie	(0)	2450	2349	902357
1037	32.4	9.4	1.8	chr12	87323094	87323592	(45951717)	C	L2a	LINE/L2	(6)	3420	2881	904084
976	31.2	14.2	1.5	chr12	87428821	87429217	(45846092)	C	LTR16B1	LTR/ERVL	(0)	480	25	904208
476	6.5	0.0	0.0	chr12	87429246	87429307	(45846002)	+	MER57B1	LTR/ERV1	1	62	(339)	904209
3165	13.4	1.5	4.3	chr12	87439559	87440094	(45835215)	C	MER41C	LTR/ERV1	(0)	521	1	904224
3221	19.8	10.6	2.8	chr12	87440095	87440657	(45834652)	+	LTR8B	LTR/ERV1	237	813	(7)	904223
705	35.5	1.4	0.0	chr12	88925871	88926163	(44349146)	+	L2a	LINE/L2	1816	2112	(1307)	906186
806	29.0	0.8	4.0	chr12	88926165	88926442	(44348867)	C	MLT1K	LTR/ERVL-MaLR	(14)	581	326	906187
851	23.0	12.8	2.6	chr12	92080774	92081081	(41194228)	C	L2a	LINE/L2	(14)	3412	3069	910887
523	32.9	12.4	2.3	chr12	92593411	92593888	(40681421)	C	L2a	LINE/L2	(0)	3426	2881	911808
695	29.0	10.3	2.8	chr12	92593932	92594254	(40681055)	+	L2c	LINE/L2	2988	3337	(50)	911809
3024	17.2	3.8	5.2	chr12	93229280	93229837	(40045472)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	912990
12	15.8	0.0	3.3	chr12	93441908	93441937	(39833372)	+	(TCTCG)n	Simple_repeat	1	30	(0)	913432
14	15.9	0.0	0.0	chr12	93441980	93442007	(39833302)	+	(GCC)n	Simple_repeat	1	28	(0)	913433
13	18.9	4.5	2.2	chr12	93571265	93571308	(39704001)	+	(CGGCG)n	Simple_repeat	1	46	(0)	913737
33	0.0	0.0	0.0	chr12	93790913	93790940	(39484369)	+	(AC)n	Simple_repeat	1	28	(0)	914129
13	15.9	2.8	0.0	chr12	93791059	93791072	(39484237)	+	(TAATA)n	Simple_repeat	1	14	(0)	914130
4144	13.7	3.0	4.6	chr12	93791073	93791828	(39483481)	+	L1MA7	LINE/L1	5547	6289	(2)	914131
1752	10.1	3.6	2.9	chr12	95838031	95838306	(37437003)	C	MER50	LTR/ERV1	(23)	711	434	917977
1195	16.2	1.5	2.2	chr12	95838282	95838523	(37436786)	C	MER50	LTR/ERV1	(460)	322	17	917977
538	21.1	0.0	0.0	chr12	96198262	96198356	(37076953)	C	FLAM_A	SINE/Alu	(43)	99	5	918667
497	23.1	0.0	1.6	chr12	96427363	96427485	(36847824)	C	7SK	RNA	(209)	122	2	919041
381	27.4	11.8	1.5	chr12	101018822	101018958	(32256351)	+	L2a	LINE/L2	3273	3425	(1)	926567
448	35.2	7.9	5.9	chr12	101021897	101022168	(32253141)	+	L3	LINE/CR1	3339	3616	(483)	926571
13	13.3	9.8	0.0	chr12	101052451	101052491	(32222818)	+	(TCTGTT)n	Simple_repeat	1	45	(0)	926611
2299	9.8	0.7	0.0	chr12	101865742	101866037	(31409272)	C	AluSq2	SINE/Alu	(14)	299	2	928132
4344	10.0	2.6	10.7	chr12	101866038	101866277	(31409032)	C	LTR8	LTR/ERV1	(155)	536	315	928131
6162	16.4	1.0	0.2	chr12	101866278	101867244	(31408065)	+	LTR1D	LTR/ERV1	1	975	(0)	928133
14	18.4	0.0	0.0	chr12	102120190	102120220	(31155089)	+	(GCG)n	Simple_repeat	1	31	(0)	928585
266	19.7	1.6	0.0	chr12	102540069	102540129	(30735180)	+	MIRc	SINE/MIR	147	208	(60)	929190
233	32.2	9.4	2.8	chr12	102540151	102540329	(30734980)	+	MIRc	SINE/MIR	38	229	(39)	929191
394	24.2	6.3	11.8	chr12	103560469	103560637	(29714672)	+	Charlie4z	DNA/hAT-Charlie	6	164	(3)	930867
277	28.4	19.5	2.0	chr12	103560686	103560883	(29714426)	+	MIRb	SINE/MIR	28	268	(0)	930868
739	26.9	14.6	0.9	chr12	103802466	103802795	(29472514)	+	MLT1K	LTR/ERVL-MaLR	210	592	(3)	931320
19	26.1	5.4	0.0	chr12	104064727	104064800	(29210509)	+	(GGC)n	Simple_repeat	1	78	(0)	931798
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
480	29.6	4.4	4.4	chr12	104177366	104177640	(29097669)	+	L2a	LINE/L2	3151	3425	(1)	932011
195	26.1	15.6	3.0	chr12	104219410	104219476	(29055833)	C	L2b	LINE/L2	(23)	3352	3276	932110
283	24.7	3.3	4.4	chr12	104603419	104603512	(28671797)	+	L2b	LINE/L2	3271	3380	(46)	932915
261	31.1	15.6	2.5	chr12	104603531	104603652	(28671657)	+	MIRb	SINE/MIR	55	195	(73)	932916
527	31.5	2.6	0.9	chr12	104603705	104603881	(28671428)	+	MIRb	SINE/MIR	6	188	(80)	932917
31	11.0	2.0	0.0	chr12	104671729	104671777	(28603532)	+	(TC)n	Simple_repeat	1	50	(0)	933063
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
307	26.4	5.4	0.0	chr12	105317464	105317550	(27957759)	C	MIRb	SINE/MIR	(142)	126	35	934151
3731	11.1	1.4	4.3	chr12	105318293	105318829	(27956480)	+	LTR24B	LTR/ERV1	1	537	(39)	934152
546	31.1	4.0	7.3	chr12	106030236	106030495	(27244814)	C	MIRb	SINE/MIR	(5)	263	13	935470
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
531	30.3	12.4	0.0	chr12	109093736	109093953	(24181356)	+	MIRb	SINE/MIR	20	268	(0)	941726
892	25.7	4.5	6.0	chr12	109462563	109462897	(23812412)	C	MER102b	DNA/hAT-Charlie	(11)	330	1	942570
598	26.8	18.5	0.3	chr12	109951640	109951935	(23323374)	C	L2a	LINE/L2	(0)	3426	3065	943680
646	23.1	10.1	0.0	chr12	110744431	110744616	(22530693)	C	L2a	LINE/L2	(0)	3426	3220	945400
739	23.2	1.0	6.9	chr12	110744633	110744852	(22530457)	C	MIR	SINE/MIR	(44)	224	12	945401
198	16.2	7.5	0.0	chr12	110845054	110845090	(22430219)	C	UCON71_Crp	Unknown	(206)	71	32	945702
194	30.0	4.8	3.6	chr12	110845209	110845291	(22430018)	+	MamRTE1	LINE/RTE-BovB	1213	1296	(2516)	945703
433	21.2	15.7	0.9	chr12	110845371	110845484	(22429825)	+	MIRb	SINE/MIR	21	154	(114)	945704
624	24.0	12.4	6.4	chr12	113312747	113312896	(19962413)	+	MER113	DNA/hAT-Charlie	102	277	(244)	951260
14	26.3	5.4	4.1	chr12	113462615	113462707	(19812602)	+	(CTCCCT)n	Simple_repeat	1	98	(0)	951669
1360	26.9	6.2	3.5	chr12	113773364	113773916	(19501393)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	92	952463
532	27.3	5.4	4.6	chr12	114662379	114662597	(18612712)	C	MIRc	SINE/MIR	(45)	223	3	954244
192	28.9	2.2	0.0	chr12	114662628	114662672	(18612637)	+	L2c	LINE/L2	3271	3316	(71)	954245
1088	30.6	5.0	7.4	chr12	115155640	115156341	(18118968)	C	MER21C	LTR/ERVL	(127)	811	128	955408
1736	17.1	3.3	2.4	chr12	115156356	115156653	(18118656)	C	AluJr	SINE/Alu	(3)	309	9	955409
760	8.6	0.0	5.7	chr12	115341359	115341481	(17933828)	C	L1PA7	LINE/L1	(0)	6154	6039	955806
287	30.6	1.2	0.0	chr12	115455351	115455435	(17819874)	+	MIR1_Amn	SINE/MIR	75	160	(70)	956047
319	29.3	3.9	2.4	chr12	116143438	116143563	(17131746)	C	Tigger16b	DNA/TcMar-Tigger	(9)	327	200	957421
1847	17.6	0.0	1.0	chr12	116433819	116434120	(16841189)	+	AluJr	SINE/Alu	1	299	(13)	958036
360	31.5	2.3	0.8	chr12	117686975	117687105	(15588204)	+	MIR3	SINE/MIR	74	206	(2)	960855
218	23.9	11.2	1.4	chr12	117687136	117687207	(15588102)	+	MIRc	SINE/MIR	91	170	(98)	960851
14	23.7	4.0	5.1	chr12	118016895	118016907	(15258402)	+	(AGGCGG)n	Simple_repeat	1	76	(0)	961646
1023	24.7	3.1	7.1	chr12	119869694	119870029	(13405280)	+	MER102a	DNA/hAT-Charlie	6	327	(3)	965661
723	27.4	6.3	0.5	chr12	120116117	120116340	(13158969)	C	MIRb	SINE/MIR	(1)	267	30	966260
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
296	23.5	13.4	0.0	chr12	121016663	121016787	(12258522)	C	MIR3	SINE/MIR	(23)	185	40	968381
19	16.8	2.0	3.9	chr12	121352690	121352740	(11922569)	+	(GTT)n	Simple_repeat	1	52	(0)	969185
2449	7.3	1.0	0.0	chr12	121924427	121924729	(11350580)	C	AluSq2	SINE/Alu	(7)	306	1	970696
1112	24.3	14.7	0.6	chr12	121942093	121942432	(11332877)	C	L1MB8	LINE/L1	(13)	6165	5770	970739
1365	24.6	10.9	4.4	chr12	121965115	121965722	(11309587)	+	L1ME3G	LINE/L1	71	688	(236)	970790
2232	22.0	5.3	2.7	chr12	123089998	123090369	(10184940)	C	MLT1F	LTR/ERVL-MaLR	(6)	542	163	973291
2007	10.2	0.3	1.4	chr12	123711762	123712046	(9563263)	+	AluSx	SINE/Alu	1	282	(30)	974779
22	3.4	0.0	5.9	chr12	123712062	123712095	(9563214)	+	(CA)n	Simple_repeat	1	34	(0)	974780
15	32.2	0.0	1.6	chr12	123712361	123712423	(9562886)	+	(GCG)n	Simple_repeat	1	63	(0)	974781
212	28.6	12.5	2.8	chr12	124512684	124512791	(8762518)	C	MIR1_Amn	SINE/MIR	(79)	151	32	976183
50	0.0	0.0	0.0	chr12	124519090	124519132	(8756177)	+	(AC)n	Simple_repeat	1	43	(0)	976197
313	32.2	10.1	0.7	chr12	124519146	124519298	(8756011)	+	MIRb	SINE/MIR	35	203	(65)	976198
2034	9.5	4.7	0.3	chr12	124909526	124909808	(8365501)	C	AluSq	SINE/Alu	(17)	296	1	977134
730	28.1	5.7	6.4	chr12	126337396	126337770	(6937539)	C	MER113	DNA/hAT-Charlie	(105)	416	44	979640
567	29.8	8.8	1.0	chr12	126338053	126338252	(6937057)	+	MIR	SINE/MIR	46	262	(0)	979642
2257	21.7	10.5	1.4	chr12	126708318	126708827	(6566482)	C	MER68B	LTR/ERVL	(0)	564	3	980250
39	21.6	3.4	5.2	chr12	128823828	128823975	(4451334)	+	(GCC)n	Simple_repeat	1	153	(0)	983925
1633	19.0	1.0	1.0	chr12	128824186	128824474	(4450835)	C	AluJr	SINE/Alu	(15)	297	9	983926
13	28.9	0.0	5.7	chr12	131949668	131949737	(1325572)	+	(GCCCC)n	Simple_repeat	1	70	(0)	988881
7639	6.1	2.0	0.0	chr12	132051267	132052253	(1223056)	C	LTR13	LTR/ERVK	(0)	1007	1	989020
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
13	28.4	3.3	1.6	chr12	132687508	132687568	(587741)	+	(GGCGC)n	Simple_repeat	1	63	(0)	989772
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
264	34.6	8.2	2.9	chr12	132761048	132761359	(513950)	+	L2	LINE/L2	2434	2763	(656)	989908
319	23.2	2.4	0.0	chr13	21014960	21015041	(93349287)	+	L2b	LINE/L2	3253	3336	(39)	995314
2372	20.0	2.8	2.8	chr13	23321271	23321814	(91042514)	C	MER44B	DNA/TcMar-Tigger	(0)	550	7	998684
1801	11.4	11.8	0.4	chr13	23378477	23378740	(90985588)	C	AluSz6	SINE/Alu	(13)	299	2	998750
212	33.3	14.9	3.4	chr13	23504152	23504387	(90859941)	C	MamSINE1	SINE/tRNA-RTE	(18)	272	5	998953
4951	14.8	2.6	6.7	chr13	23506951	23507152	(90857176)	+	Tigger3b	DNA/TcMar-Tigger	1	196	(1035)	998954
14	15.0	10.9	1.6	chr13	26186524	26186578	(88177750)	+	(GCGCACA)n	Simple_repeat	1	61	(0)	1002856
2877	4.8	0.0	0.0	chr13	26186766	26187075	(88177253)	C	AluY	SINE/Alu	(0)	311	2	1002857
1087	22.4	7.0	14.2	chr13	27042831	27043146	(87321182)	C	Tigger13a	DNA/TcMar-Tigger	(268)	503	187	1004217
282	27.6	6.6	3.9	chr13	27600065	27600202	(86764126)	C	L2a	LINE/L2	(0)	3426	3233	1005217
524	20.7	3.6	8.7	chr13	27600204	27600365	(86763963)	C	MER33	DNA/hAT-Charlie	(178)	146	5	1005218
18	28.0	0.0	1.6	chr13	28138293	28138354	(86225974)	+	(CCTGCC)n	Simple_repeat	1	62	(0)	1006216
3667	12.7	1.5	0.0	chr13	29654446	29654966	(84709362)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1008428
23	25.9	4.6	0.0	chr13	29850315	29850403	(84513925)	+	(CGCCTC)n	Simple_repeat	1	93	(0)	1008714
18	7.8	0.0	0.0	chr13	29850579	29850605	(84513723)	+	(GGC)n	Simple_repeat	1	27	(0)	1008715
18	0.0	0.0	0.0	chr13	30307395	30307416	(84056912)	+	(GCC)n	Simple_repeat	1	22	(0)	1009431
581	31.4	3.9	2.0	chr13	30338569	30338821	(84025507)	+	Plat_L3	LINE/CR1	2346	2603	(983)	1009490
391	28.4	6.1	1.2	chr13	30342243	30342413	(84021915)	C	MIRb	SINE/MIR	(82)	186	7	1009495
14	13.6	0.0	5.6	chr13	30792710	30792745	(83571583)	+	(GCTGG)n	Simple_repeat	1	36	(0)	1010390
6746	21.6	3.8	4.5	chr13	31638770	31640499	(82723829)	+	L1M4b	LINE/L1	181	1899	(4968)	1011589
192	34.0	6.7	0.0	chr13	31756297	31756393	(82607935)	+	MIRb	SINE/MIR	119	222	(46)	1011763
2146	12.9	1.0	0.0	chr13	31756622	31756916	(82607412)	C	AluSz	SINE/Alu	(12)	300	3	1011764
2886	19.9	1.9	7.3	chr13	33235097	33235713	(81128615)	+	MER119	DNA/hAT-Charlie	1	583	(0)	1014004
342	23.2	6.9	1.0	chr13	33251106	33251201	(81113127)	+	MIRb	SINE/MIR	102	203	(65)	1014031
1749	22.0	6.3	2.9	chr13	34207198	34207493	(80156835)	C	MLT1D	LTR/ERVL-MaLR	(182)	323	13	1015465
530	22.4	6.2	2.7	chr13	34207505	34207676	(80156652)	+	MLT1G	LTR/ERVL-MaLR	357	560	(35)	1015464
297	34.6	2.8	0.9	chr13	34207703	34207912	(80156416)	+	Charlie18a	DNA/hAT-Charlie	66	279	(63)	1015467
188	15.6	3.0	0.0	chr13	34357472	34357503	(80006825)	C	AmnSINE1	SINE/5S-Deu-L2	(370)	205	173	1015673
2370	19.2	1.1	0.5	chr13	34678147	34678580	(79685748)	+	MER44B	DNA/TcMar-Tigger	1	437	(113)	1016128
605	30.6	9.0	3.5	chr13	35512462	35512806	(78851522)	C	MLT1M	LTR/ERVL-MaLR	(141)	531	166	1017218
542	28.5	9.2	5.8	chr13	35512974	35513133	(78851195)	+	L4_A_Mam	LINE/RTE-X	4578	4744	(246)	1017217
13	31.7	0.0	1.8	chr13	37029843	37029898	(77334430)	+	(AATCA)n	Simple_repeat	1	56	(0)	1019438
19	14.9	0.0	0.0	chr13	40221917	40221953	(74142375)	+	(ATTC)n	Simple_repeat	1	37	(0)	1023754
2153	19.9	2.0	6.3	chr13	40222027	40222552	(74141776)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	1023755
786	7.9	0.0	2.0	chr13	41194752	41194852	(73169476)	C	AluJb	SINE/Alu	(213)	99	1	1025419
312	28.5	11.6	0.8	chr13	41696559	41696689	(72667639)	+	MIRb	SINE/MIR	63	209	(59)	1026235
2207	26.7	12.2	4.5	chr13	41696692	41697443	(72666885)	+	L2a	LINE/L2	2050	2914	(505)	1026236
570	30.6	3.1	4.1	chr13	41986209	41986498	(72377830)	+	LTR104_Mam	LTR/Gypsy	502	788	(721)	1026665
16	5.3	0.0	0.0	chr13	42007952	42007971	(72356357)	+	(GA)n	Simple_repeat	1	20	(0)	1026703
13	20.1	5.0	0.0	chr13	42007972	42007986	(72356342)	+	A-rich	Low_complexity	10	42	(0)	1026704
24	23.4	3.9	1.2	chr13	42272049	42272132	(72092196)	+	(GCG)n	Simple_repeat	1	86	(0)	1027115
225	27.1	20.4	2.3	chr13	43273433	43273564	(71090764)	+	L2c	LINE/L2	2986	3147	(240)	1028651
380	35.4	2.7	0.0	chr13	43273567	43273744	(71090584)	C	MER91A	DNA/hAT-Tip100	(13)	183	1	1028652
294	30.9	3.5	5.1	chr13	43805318	43805450	(70558878)	+	MER5A	DNA/hAT-Charlie	16	150	(39)	1029363
1183	34.0	10.4	2.0	chr13	43861736	43862693	(70501635)	+	L2a	LINE/L2	2391	3426	(0)	1029433
3123	18.4	1.2	0.0	chr13	43865765	43866275	(70498053)	C	Tigger7	DNA/TcMar-Tigger	(1974)	517	1	1029441
270	25.7	0.0	7.5	chr13	43866276	43866355	(70497973)	+	MER21C	LTR/ERVL	799	872	(66)	1029437
497	30.4	10.3	4.4	chr13	44313416	44313743	(70050585)	C	L2c	LINE/L2	(0)	3387	3036	1030094
397	7.8	0.0	27.4	chr13	44361165	44361203	(70003125)	+	MADE1	DNA/TcMar-Mariner	1	39	(41)	1030178
1884	14.3	0.0	3.4	chr13	44361204	44361522	(70002806)	C	AluSq2	SINE/Alu	(0)	313	1	1030179
23	19.9	2.0	8.7	chr13	44577328	44577429	(69786899)	+	GA-rich	Low_complexity	1	104	(0)	1030517
2164	9.7	0.3	4.8	chr13	44710335	44710644	(69653684)	+	AluSg	SINE/Alu	1	296	(14)	1030807
299	30.4	15.2	1.2	chr13	44710938	44711107	(69653221)	C	MIRb	SINE/MIR	(57)	211	14	1030808
1928	18.7	5.2	5.0	chr13	45086520	45086858	(69277470)	C	MLT1C	LTR/ERVL-MaLR	(119)	348	6	1031539
5698	6.2	0.8	0.1	chr13	45188909	45189637	(69174691)	C	L1PA6	LINE/L1	(1)	6153	5420	1031763
280	3.0	0.0	0.0	chr13	45189687	45189719	(69174609)	+	L1P3	LINE/L1	5054	5086	(1060)	1031764
257	6.2	0.0	0.0	chr13	45189740	45189771	(69174557)	+	L1P3	LINE/L1	5055	5086	(1060)	1031764
385	32.0	5.6	0.2	chr13	45206315	45206468	(69157860)	+	L2b	LINE/L2	3238	3421	(5)	1031792
209	30.4	0.0	2.8	chr13	45206647	45206717	(69157611)	+	MIRb	SINE/MIR	191	259	(9)	1031793
183	32.7	5.3	5.3	chr13	45236107	45236219	(69128109)	+	MamTip2	DNA/hAT-Tip100	40	152	(153)	1031849
340	29.3	9.1	0.6	chr13	45236228	45236409	(69127919)	+	CR1_Mam	LINE/CR1	1318	1516	(688)	1031850
370	16.4	0.0	5.2	chr13	46804294	46804370	(67559958)	C	L1ME4b	LINE/L1	(311)	581	509	1034454
1615	23.9	10.2	1.3	chr13	46804378	46804895	(67559433)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	1	1034455
701	32.4	14.3	1.3	chr13	47334087	47334468	(67029860)	+	LTR33	LTR/ERVL	76	515	(0)	1035197
365	29.3	8.9	6.7	chr13	47708812	47709096	(66655232)	C	LTR78B	LTR/ERV1	(37)	1259	968	1035658
2628	7.0	0.3	1.3	chr13	48095346	48095659	(66268669)	C	AluY	SINE/Alu	(0)	311	1	1036247
35	0.0	0.0	0.0	chr13	48801405	48801434	(65562894)	+	(AC)n	Simple_repeat	1	30	(0)	1037364
320	31.5	1.1	2.1	chr13	48891618	48891711	(65472617)	+	L2b	LINE/L2	3252	3344	(31)	1037519
356	28.7	5.8	3.7	chr13	48891890	48892023	(65472305)	C	MIRc	SINE/MIR	(104)	164	28	1037520
266	19.4	16.8	13.3	chr13	48908809	48908884	(65455444)	C	L1M5	LINE/L1	(623)	5571	5480	1037549
12	15.3	5.3	2.5	chr13	48975985	48976022	(65388306)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	1037665
1528	26.3	8.0	4.1	chr13	49859262	49859768	(64504560)	+	ERVL-E-int	LTR/ERVL	1210	1737	(3930)	1039198
358	22.2	4.9	4.9	chr13	49859770	49859850	(64504478)	+	AluJr	SINE/Alu	2	82	(230)	1039199
586	21.2	3.8	10.0	chr13	49859851	49859886	(64504442)	+	L1ME1	LINE/L1	4965	4989	(1157)	1039200
2209	9.8	0.3	2.0	chr13	49859887	49860191	(64504137)	+	AluSg	SINE/Alu	5	304	(6)	1039201
507	32.3	2.6	4.1	chr13	50245196	50245397	(64118931)	+	MIR3	SINE/MIR	3	198	(10)	1039828
292	16.3	0.0	0.0	chr13	50589687	50589735	(63774593)	C	L2a	LINE/L2	(0)	3426	3378	1040342
929	21.5	8.0	0.0	chr13	50589985	50590179	(63774149)	C	MIR	SINE/MIR	(5)	257	46	1040343
799	31.4	11.8	3.4	chr13	50644435	50645148	(63719180)	+	L2a	LINE/L2	2635	3426	(0)	1040430
323	25.7	8.7	7.9	chr13	51591008	51591121	(62773207)	+	MIR3	SINE/MIR	42	156	(52)	1041823
1072	14.3	1.1	0.0	chr13	51643077	51643258	(62721070)	C	L1MB4	LINE/L1	(12)	6168	5985	1041921
209	32.1	4.7	3.6	chr13	51643382	51643465	(62720863)	C	L2b	LINE/L2	(20)	3355	3271	1041922
3909	11.8	1.5	1.1	chr13	52406708	52407204	(61957124)	+	L1PA17	LINE/L1	5542	6043	(123)	1043057
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
13	22.1	4.1	2.0	chr13	52652663	52652711	(61711617)	+	G-rich	Low_complexity	1	51	(0)	1043445
4278	16.1	4.8	0.1	chr13	59302972	59303779	(55060549)	C	L1MB7	LINE/L1	(0)	6184	5337	1051882
336	32.2	19.0	0.8	chr13	59303793	59304033	(55060295)	+	L2	LINE/L2	2130	2424	(995)	1051880
15938	18.6	3.2	1.4	chr13	59469051	59473898	(54890430)	+	L1MB1	LINE/L1	1064	5985	(681)	1052147
2767	26.9	10.4	4.2	chr13	59776626	59778075	(54586253)	+	L1MC4	LINE/L1	6283	7849	(193)	1052566
3736	17.4	10.4	0.0	chr13	63435584	63436318	(50928010)	C	LTR8B	LTR/ERV1	(0)	820	1	1057274
243	35.0	4.6	5.2	chr13	64648325	64648527	(49715801)	C	L2b	LINE/L2	(188)	3199	3002	1058805
3517	14.2	0.4	0.0	chr13	64928475	64928997	(49435331)	C	MER1A	DNA/hAT-Charlie	(4)	525	1	1059146
6626	20.9	1.2	3.5	chr13	64928998	64929960	(49434368)	+	ERVL-B4-int	LTR/ERVL	4644	5593	(121)	1059144
2332	13.0	0.5	3.2	chr13	66673090	66673463	(47690865)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1061316
843	23.3	6.1	4.5	chr13	66673464	66673741	(47690587)	+	MLT1C	LTR/ERVL-MaLR	183	467	(0)	1061314
628	34.4	2.4	0.4	chr13	67299213	67299454	(47064874)	C	LTR16A	LTR/ERVL	(178)	273	27	1062097
413	31.6	10.6	6.0	chr13	67299469	67299835	(47064493)	+	MLT1J	LTR/ERVL-MaLR	127	512	(0)	1062098
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
3869	14.3	0.3	3.4	chr13	75135473	75136094	(39228234)	C	LTR26	LTR/ERV1	(0)	603	1	1072883
818	20.1	2.5	1.2	chr13	75226781	75226941	(39137387)	C	MER5A1	DNA/hAT-Charlie	(2)	164	2	1073003
668	25.8	5.7	4.8	chr13	75227054	75227261	(39137067)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	1073004
203	25.3	3.5	8.8	chr13	75368182	75368272	(38996056)	C	MIR3	SINE/MIR	(1)	207	122	1073212
224	28.3	13.1	3.2	chr13	75620975	75621098	(38743230)	+	MIRb	SINE/MIR	22	159	(109)	1073660
2663	5.1	0.0	1.6	chr13	75717082	75717397	(38646931)	+	AluY	SINE/Alu	1	311	(0)	1073801
16	0.0	0.0	0.0	chr13	78659296	78659312	(35705016)	+	(A)n	Simple_repeat	1	17	(0)	1077841
28	0.0	0.0	0.0	chr13	78659313	78659339	(35704989)	+	(AAAG)n	Simple_repeat	1	27	(0)	1077842
299	30.9	1.2	1.2	chr13	80037475	80037556	(34326772)	C	MIRc	SINE/MIR	(91)	177	96	1079691
180	36.3	10.1	2.4	chr13	80049027	80049153	(34315175)	+	MIRc	SINE/MIR	56	193	(75)	1079703
2723	27.3	10.3	7.8	chr13	80141133	80141901	(34222427)	+	L1M7	LINE/L1	4	789	(5429)	1079841
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
335	30.8	13.6	9.6	chr13	85368026	85368553	(28995775)	C	MLT1G1	LTR/ERVL-MaLR	(1)	578	1	1086455
36	2.9	0.0	0.0	chr13	85497831	85497865	(28866463)	+	(CA)n	Simple_repeat	1	35	(0)	1086628
264	36.3	0.0	0.0	chr13	85503768	85503869	(28860459)	+	ERVL-E-int	LTR/ERVL	45	146	(5521)	1086634
221	33.3	7.2	3.4	chr13	85528869	85529014	(28835314)	+	MamRTE1	LINE/RTE-BovB	2983	3134	(678)	1086661
14	20.5	0.0	0.0	chr13	85654556	85654589	(28709739)	+	A-rich	Low_complexity	1	34	(0)	1086821
431	33.5	7.4	6.5	chr13	86572050	86572569	(27791759)	C	L1M8	LINE/L1	(1824)	531	7	1087920
453	31.7	0.8	0.0	chr13	91166875	91166997	(23197331)	+	MIRb	SINE/MIR	31	154	(114)	1093870
232	25.9	8.0	1.2	chr13	91168233	91168314	(23196014)	+	MIRb	SINE/MIR	177	264	(4)	1093870
535	28.7	3.2	0.0	chr13	91168312	91168461	(23195867)	C	MIRb	SINE/MIR	(60)	208	54	1093873
1661	26.7	5.6	2.0	chr13	93170023	93170595	(21193733)	C	MLT1G	LTR/ERVL-MaLR	(0)	595	3	1096538
355	29.4	4.5	0.8	chr13	94249494	94249620	(20114708)	C	MIRc	SINE/MIR	(17)	251	120	1098024
381	28.2	7.6	0.9	chr13	94249874	94249984	(20114344)	+	MER117	DNA/hAT-Charlie	78	196	(1)	1098025
11	24.0	2.6	0.0	chr13	94310494	94310532	(20053796)	+	(TCTTTT)n	Simple_repeat	1	40	(0)	1098109
10190	12.7	1.9	5.0	chr13	94656645	94657435	(19706893)	+	Tigger4	DNA/TcMar-Tigger	907	1646	(1085)	1098678
724	17.5	12.9	1.5	chr13	95256098	95256234	(19108094)	C	AluJr	SINE/Alu	(21)	291	137	1099643
2078	14.6	0.0	1.3	chr13	95256474	95256789	(19107539)	+	AluJb	SINE/Alu	1	312	(0)	1099644
287	34.7	14.6	5.6	chr13	95535141	95536122	(18828206)	C	L2c	LINE/L2	(484)	2935	1850	1100301
733	24.3	0.0	18.9	chr13	97115728	97115827	(17248501)	C	MER63A	DNA/hAT-Blackjack	(0)	210	144	1102542
92	3.9	0.0	2.7	chr13	97115828	97115939	(17248389)	+	(TCTT)n	Simple_repeat	1	112	(0)	1102543
343	32.2	6.6	1.0	chr13	97122056	97122287	(17242041)	+	MIRb	SINE/MIR	17	252	(10)	1102550
935	28.8	8.5	2.6	chr13	97879642	97880105	(16484223)	+	LTR33	LTR/ERVL	22	515	(0)	1103622
314	34.5	2.5	4.6	chr13	97880194	97880433	(16483895)	+	Charlie15b	DNA/hAT-Charlie	825	1059	(2)	1103623
322	28.4	17.8	0.9	chr13	100128330	100128626	(14235702)	C	L2c	LINE/L2	(20)	3406	3029	1107454
387	34.4	13.5	1.2	chr13	100128625	100129110	(14235218)	+	L2	LINE/L2	1945	2499	(920)	1107455
2627	21.7	12.1	3.0	chr13	100132205	100132780	(14231548)	C	L1MD2	LINE/L1	(229)	6528	5876	1107461
246	37.2	4.4	1.5	chr13	100215093	100215223	(14149105)	+	L2a	LINE/L2	3074	3208	(179)	1107599
549	26.8	2.6	3.2	chr13	100215258	100215411	(14148917)	C	L2a	LINE/L2	(0)	3426	3274	1107606
256	29.4	7.8	6.3	chr13	100392906	100393032	(13971296)	C	MIRc	SINE/MIR	(135)	133	2	1107893
337	34.3	5.8	2.7	chr13	101307374	101307556	(13056772)	C	MIRb	SINE/MIR	(69)	199	11	1109232
615	21.2	1.9	4.3	chr13	101450729	101450891	(12913437)	C	MER5A1	DNA/hAT-Charlie	(5)	161	3	1109437
312	34.4	4.1	2.6	chr13	101698492	101698685	(12665643)	+	Charlie13b	DNA/hAT-Charlie	300	496	(16)	1109747
1225	16.0	2.8	3.3	chr13	102845414	102845626	(11518702)	+	AluJr	SINE/Alu	85	296	(16)	1111373
416	31.7	11.1	1.4	chr13	106376299	106376573	(7987755)	C	AmnSINE1	SINE/5S-Deu-L2	(163)	412	108	1116003
430	19.0	0.0	0.0	chr13	108217966	108218044	(6146284)	+	Arthur1C	DNA/hAT-Tip100	285	363	(0)	1118470
197	39.8	8.1	1.2	chr13	108917878	108918050	(5446278)	C	MIRb	SINE/MIR	(45)	223	38	1119411
1239	33.5	13.9	3.0	chr13	109345381	109346195	(5018133)	C	L3	LINE/CR1	(798)	3301	2392	1119919
28	6.0	0.0	0.0	chr13	109786502	109786536	(4577792)	+	(GCT)n	Simple_repeat	1	35	(0)	1120505
12	22.4	3.1	6.1	chr13	109786754	109786817	(4577511)	+	(CGCCCC)n	Simple_repeat	1	66	(0)	1120506
12	24.2	2.6	0.0	chr13	109786820	109786858	(4577470)	+	G-rich	Low_complexity	1	40	(0)	1120507
23	18.2	4.0	3.9	chr13	109787005	109787078	(4577250)	+	G-rich	Low_complexity	1	77	(0)	1120508
1871	15.4	0.3	1.1	chr13	110546754	110547039	(3817289)	C	AluJr	SINE/Alu	(28)	284	1	1121375
17	14.6	0.0	4.8	chr13	110915076	110915117	(3449211)	+	G-rich	Low_complexity	1	42	(0)	1121926
772	20.0	0.0	3.5	chr13	112711321	112711465	(1652863)	+	FLAM_A	SINE/Alu	1	140	(2)	1123858
1561	18.0	8.8	1.3	chr13	113178437	113178751	(1185577)	+	MER2	DNA/TcMar-Tigger	1	341	(4)	1124288
1371	18.9	6.5	6.3	chr13	113187336	113187925	(1176403)	C	L1M4	LINE/L1	(536)	5642	5060	1124301
2609	22.9	6.6	8.2	chr13	113211685	113212501	(1151827)	C	L1ME1	LINE/L1	(452)	5727	4960	1124332
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
26	25.2	4.8	3.1	chr13	113297341	113297347	(1066981)	+	(GCGCCCC)n	Simple_repeat	1	15	(115)	1124475
12	29.0	2.8	4.0	chr13	113297348	113297419	(1066909)	+	(CGCAC)n	Simple_repeat	1	74	(0)	1124476
427	36.7	3.9	1.8	chr13	113907410	113907689	(456639)	C	L1M5	LINE/L1	(1626)	4520	4235	1125114
199	34.2	1.4	0.0	chr13	113907717	113907789	(456539)	+	MIRb	SINE/MIR	35	108	(160)	1125115
243	20.4	4.1	6.1	chr13	113907874	113907972	(456356)	C	L1MD	LINE/L1	(1927)	4219	4123	1125116
330	27.0	1.5	12.8	chr13	113908651	113908947	(455381)	C	L1M5	LINE/L1	(2154)	3992	3730	1125114
12	15.8	0.0	3.3	chr13	114281551	114281580	(82748)	+	G-rich	Low_complexity	1	30	(0)	1125453
20	5.5	7.9	0.0	chr13	114281896	114281934	(82394)	+	(GAGGG)n	Simple_repeat	1	42	(0)	1125454
1628	20.1	0.0	0.7	chr14	20169788	20170065	(86873653)	C	AluJo	SINE/Alu	(30)	282	7	1127614
16	14.0	7.5	0.0	chr14	20343644	20343683	(86700035)	+	(GGC)n	Simple_repeat	1	43	(0)	1127888
644	1.4	0.0	0.0	chr14	20684016	20684089	(86359629)	+	tRNA-Pro-CCA	tRNA	1	74	(1)	1128460
19	21.4	0.0	2.0	chr14	20989720	20989770	(86053948)	+	(CACCC)n	Simple_repeat	1	51	(0)	1128931
21	16.1	0.0	0.0	chr14	21384077	21384117	(85659601)	+	(T)n	Simple_repeat	1	41	(0)	1129660
13	19.4	0.0	2.7	chr14	22982543	22982579	(84061139)	+	(CGCCCCC)n	Simple_repeat	1	37	(0)	1132084
35	14.5	3.8	2.4	chr14	23321464	23321543	(83722175)	+	(GCG)n	Simple_repeat	1	83	(0)	1132700
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
18	16.3	0.0	0.0	chr14	30622341	30622376	(76421342)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	1142089
628	30.8	10.8	7.6	chr14	31165675	31165853	(75877865)	C	L2a	LINE/L2	(0)	3426	3244	1143059
2205	12.3	0.0	0.0	chr14	31165854	31166145	(75877573)	C	AluSz	SINE/Alu	(20)	292	1	1143060
1262	26.5	8.3	0.9	chr14	31927544	31928095	(75115623)	+	L2a	LINE/L2	2813	3426	(0)	1144379
243	39.5	2.7	0.0	chr14	32010532	32010640	(75033078)	+	L2c	LINE/L2	3272	3383	(4)	1144514
1132	25.9	5.2	5.4	chr14	32203782	32204341	(74839377)	C	L1MC5a	LINE/L1	(257)	2520	1962	1144829
345	28.8	7.0	1.5	chr14	32593482	32593615	(74450103)	+	L3b	LINE/CR1	5091	5232	(0)	1145373
223	35.4	9.8	0.0	chr14	32593685	32593831	(74449887)	C	MIR3	SINE/MIR	(31)	177	15	1145374
255	27.2	14.9	1.0	chr14	32611614	32611717	(74432001)	+	HAL1	LINE/L1	505	625	(1882)	1145401
808	28.6	2.5	0.8	chr14	33686504	33686743	(73356975)	C	MIR	SINE/MIR	(3)	259	16	1146629
25	0.0	0.0	0.0	chr14	33692837	33692863	(73350855)	+	(A)n	Simple_repeat	1	27	(0)	1146637
35	21.7	3.9	6.2	chr14	34462243	34462398	(72581320)	+	(CCGC)n	Simple_repeat	1	162	(0)	1147844
41	0.0	0.0	0.0	chr14	49987614	49987648	(57056070)	+	(AC)n	Simple_repeat	1	35	(0)	1169049
867	32.8	9.6	1.7	chr14	50013685	50014165	(57029553)	+	L3	LINE/CR1	3286	3808	(291)	1169095
572	23.8	5.8	0.7	chr14	51304876	51305023	(55738695)	C	L1MC5a	LINE/L1	(236)	2541	2386	1171280
564	29.2	4.0	1.0	chr14	51305138	51305331	(55738387)	+	Tigger12c	DNA/TcMar-Tigger	27	226	(508)	1171281
15	13.9	0.0	0.0	chr14	51473816	51473839	(55569879)	+	(T)n	Simple_repeat	1	24	(0)	1171529
542	26.4	8.4	0.6	chr14	51473983	51474157	(55569561)	C	MIRb	SINE/MIR	(66)	202	13	1171530
5054	17.7	2.5	2.2	chr14	51553918	51555014	(55488704)	+	L1MC3	LINE/L1	6685	7784	(1)	1171641
218	33.3	3.1	0.0	chr14	51604233	51604325	(55439393)	C	L2c	LINE/L2	(17)	3370	3275	1171720
17	20.8	2.3	0.0	chr14	51604408	51604451	(55439267)	+	(ATT)n	Simple_repeat	1	45	(0)	1171721
25	21.7	2.1	5.2	chr14	51651786	51651879	(55391839)	+	G-rich	Low_complexity	1	96	(0)	1171808
404	24.1	21.7	5.0	chr14	52906324	52906782	(54136936)	+	L1ME1	LINE/L1	1273	1829	(5258)	1173754
34	2.9	0.0	0.0	chr14	54489119	54489154	(52554564)	+	(T)n	Simple_repeat	1	36	(0)	1175997
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
12	18.3	6.7	2.1	chr14	54566171	54566215	(52477503)	+	(GCACC)n	Simple_repeat	1	48	(0)	1176154
33	0.0	0.0	3.0	chr14	54776850	54776882	(52266836)	+	(TG)n	Simple_repeat	1	33	(0)	1176437
16	9.9	0.0	5.6	chr14	54776883	54776918	(52266800)	+	A-rich	Low_complexity	1	36	(0)	1176438
1293	9.4	0.0	0.0	chr14	55387981	55388140	(51655578)	+	AluSx1	SINE/Alu	127	286	(26)	1177596
350	33.6	13.8	4.4	chr14	55557295	55557661	(51486057)	+	MamRTE1	LINE/RTE-BovB	3236	3642	(170)	1177920
187	33.0	6.2	3.2	chr14	56992376	56992432	(50051286)	+	L2a	LINE/L2	3279	3340	(35)	1180085
1746	18.7	1.5	0.9	chr14	56992433	56992771	(50050947)	+	MER61A	LTR/ERV1	1	341	(0)	1180086
363	28.6	7.4	4.0	chr14	58731927	58732124	(48311594)	C	MER5C1	DNA/hAT-Charlie	(4)	259	5	1182712
20	0.0	0.0	0.0	chr14	58746605	58746626	(48297092)	+	(A)n	Simple_repeat	1	22	(0)	1182740
2315	13.2	2.2	0.0	chr14	58898380	58898735	(48144983)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1182977
546	23.4	1.2	7.6	chr14	58898736	58898804	(48144914)	C	MIR	SINE/MIR	(104)	158	91	1182976
3360	16.2	5.2	5.7	chr14	59277876	59278582	(47765136)	C	MER44D	DNA/TcMar-Tigger	(0)	705	2	1183520
12	14.6	0.0	5.9	chr14	60653182	60653215	(46390503)	+	(CCTG)n	Simple_repeat	1	34	(0)	1185331
1055	20.8	1.5	0.0	chr14	61152929	61153130	(45890588)	C	MER20	DNA/hAT-Charlie	(14)	205	1	1186051
15	25.6	2.6	0.0	chr14	61562883	61562921	(45480797)	+	(TC)n	Simple_repeat	1	40	(0)	1186687
22	6.7	0.0	0.0	chr14	64503857	64503888	(42539830)	+	(GTGC)n	Simple_repeat	1	32	(0)	1191408
305	26.9	7.9	1.1	chr14	64806659	64806752	(42236966)	C	L2b	LINE/L2	(3)	3372	3272	1191920
13	28.0	0.0	6.8	chr14	65412838	65412910	(41630808)	+	(CCCTC)n	Simple_repeat	1	73	(0)	1193135
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
508	34.6	14.7	2.4	chr14	68146685	68147481	(38896237)	C	L4_C_Mam	LINE/RTE-X	(1565)	3425	2491	1197291
576	29.5	11.5	3.8	chr14	68464548	68464811	(38578907)	C	L3	LINE/CR1	(945)	3154	2868	1197739
18	0.0	0.0	0.0	chr14	68682911	68682930	(38360788)	+	(T)n	Simple_repeat	1	20	(0)	1198078
275	35.8	5.6	1.9	chr14	68940367	68940520	(38103198)	+	MIRb	SINE/MIR	41	200	(68)	1198521
21	16.4	3.5	3.3	chr14	69152986	69153043	(37890675)	+	(CCG)n	Simple_repeat	1	60	(0)	1198957
1580	24.2	10.0	9.1	chr14	69464472	69465180	(37578538)	C	MER77B	LTR/ERVL	(171)	767	1	1199568
13	11.0	0.0	6.1	chr14	71320402	71320434	(35723284)	+	G-rich	Low_complexity	1	33	(0)	1202618
14	19.5	0.0	2.7	chr14	71320464	71320500	(35723218)	+	(GTGA)n	Simple_repeat	1	37	(0)	1202619
280	30.0	2.9	2.9	chr14	72643261	72643363	(34400355)	+	MIR3	SINE/MIR	100	202	(6)	1204570
1744	21.9	10.2	1.7	chr14	72665447	72665910	(34377808)	+	L1MC4a	LINE/L1	7364	7871	(11)	1204602
747	28.3	6.2	4.4	chr14	72745236	72745641	(34298077)	C	L1ME4b	LINE/L1	(2102)	675	258	1204742
245	27.2	2.4	1.2	chr14	72745977	72746058	(34297660)	+	MER91A	DNA/hAT-Tip100	17	99	(97)	1204743
1990	12.6	0.0	0.0	chr14	74303270	74303563	(32740155)	+	AluJb	SINE/Alu	2	295	(17)	1208200
40	2.6	0.0	0.0	chr14	74572285	74572323	(32471395)	+	(GT)n	Simple_repeat	1	39	(0)	1208757
16	0.0	0.0	0.0	chr14	74572324	74572341	(32471377)	+	(AG)n	Simple_repeat	1	18	(0)	1208758
632	19.9	8.5	4.2	chr14	75175777	75175944	(31867774)	+	MIRb	SINE/MIR	91	266	(2)	1209873
12	26.8	4.1	0.0	chr14	75868159	75868207	(31175511)	+	(CTCC)n	Simple_repeat	1	51	(0)	1211216
12	22.2	6.4	0.0	chr14	76956643	76956689	(30087029)	+	(GCCGGCC)n	Simple_repeat	1	50	(0)	1213291
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
16	0.0	0.0	0.0	chr14	77033326	77033342	(30010376)	+	(A)n	Simple_repeat	1	17	(0)	1213476
386	32.0	11.0	4.9	chr14	78967665	78967910	(28075808)	+	MIRb	SINE/MIR	3	265	(3)	1217081
217	31.8	22.2	2.1	chr14	79369549	79369837	(27673881)	C	L3b	LINE/CR1	(185)	5047	4684	1217672
253	21.9	9.9	3.0	chr14	79369872	79369937	(27673781)	C	Plat_L3	LINE/CR1	(613)	2973	2903	1217673
232	34.4	8.0	6.4	chr14	79584508	79584802	(27458916)	+	LTR88a	LTR/Gypsy?	253	552	(264)	1218023
2150	29.3	3.0	3.0	chr14	80095565	80096353	(26947365)	C	MamGypsy2-I	LTR/Gypsy	(1670)	2496	1708	1218740
2100	11.4	2.4	0.0	chr14	80425439	80425762	(26617956)	C	MER44D	DNA/TcMar-Tigger	(5)	700	369	1219191
1011	16.1	19.0	1.4	chr14	80425772	80425991	(26617727)	+	Tigger7	DNA/TcMar-Tigger	80	347	(2144)	1219192
428	21.2	0.0	0.0	chr14	80425989	80426068	(26617650)	C	MER44D	DNA/TcMar-Tigger	(625)	80	1	1219191
250	14.0	0.0	8.5	chr14	80426070	80426116	(26617602)	+	MER58D	DNA/hAT-Charlie	344	386	(0)	1219193
404	27.9	11.2	2.3	chr14	80638452	80638727	(26404991)	+	L2a	LINE/L2	3063	3383	(4)	1219464
7517	18.6	7.1	3.1	chr14	81169670	81171382	(25872336)	+	L1P4a	LINE/L1	23	1809	(4694)	1220221
12	22.6	2.3	2.3	chr14	85516734	85516776	(21526942)	+	A-rich	Low_complexity	1	44	(0)	1226374
15	20.1	0.0	5.1	chr14	85531858	85531896	(21511822)	+	(GT)n	Simple_repeat	1	39	(0)	1226390
18	8.7	0.0	0.0	chr14	85587288	85587312	(21456406)	+	(A)n	Simple_repeat	1	25	(0)	1226464
478	34.4	1.0	0.5	chr14	89137868	89138057	(17905661)	C	MIRb	SINE/MIR	(21)	247	57	1231593
2558	19.2	10.1	8.1	chr14	89425668	89426215	(17617503)	C	Tigger17a	DNA/TcMar-Tigger	(1)	653	88	1232053
2070	10.4	1.4	0.7	chr14	89426216	89426520	(17617198)	C	AluSq2	SINE/Alu	(0)	313	3	1232054
2315	11.2	0.3	0.7	chr14	89956616	89956909	(17086809)	+	AluSx1	SINE/Alu	1	293	(19)	1233011
279	33.4	15.3	4.5	chr14	89956989	89957370	(17086348)	+	L2c	LINE/L2	2956	3386	(1)	1233012
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
226	28.6	17.4	0.8	chr14	90409005	90409138	(16634580)	+	MIR3	SINE/MIR	45	205	(3)	1233847
23	8.2	2.4	2.4	chr14	91510015	91510055	(15533663)	+	(CCG)n	Simple_repeat	1	42	(0)	1235828
18	14.0	0.0	4.7	chr14	91947760	91947802	(15095916)	+	G-rich	Low_complexity	1	43	(0)	1236594
14	27.7	1.6	3.1	chr14	91947803	91947823	(15095895)	+	(GGCGC)n	Simple_repeat	1	65	(0)	1236595
195	24.3	17.1	0.9	chr14	91980460	91980567	(15063151)	+	MIRc	SINE/MIR	120	248	(20)	1236654
210	19.3	8.1	3.4	chr14	92540818	92540876	(14502842)	C	MIR3	SINE/MIR	(0)	208	147	1237739
433	29.0	12.4	0.0	chr14	92540886	92541047	(14502671)	C	MER117	DNA/hAT-Charlie	(10)	187	3	1237740
248	26.2	6.1	0.4	chr14	92541050	92541142	(14502576)	C	MIR3	SINE/MIR	(48)	160	65	1237739
2392	27.5	10.0	4.8	chr14	94341473	94342418	(12701300)	C	L2	LINE/L2	(1501)	1918	893	1240976
186	27.6	1.7	6.5	chr14	94610623	94610684	(12433034)	C	L2a	LINE/L2	(61)	3365	3307	1241425
346	33.1	4.7	3.2	chr14	94610679	94610865	(12432853)	C	MIRb	SINE/MIR	(60)	208	19	1241426
1808	10.8	0.3	7.2	chr14	94610956	94611260	(12432458)	C	AluSx	SINE/Alu	(17)	295	12	1241427
381	23.4	6.1	0.9	chr14	95220931	95221038	(11822680)	+	MLT1N2	LTR/ERVL-MaLR	438	551	(11)	1242614
1253	19.4	4.0	3.4	chr14	95265258	95265551	(11778167)	+	MLT2D	LTR/ERVL	117	412	(2)	1242695
453	26.7	8.8	1.6	chr14	96145426	96145615	(10898103)	+	L1ME4a	LINE/L1	5744	5948	(176)	1244324
434	31.1	5.2	0.6	chr14	96145634	96145798	(10897920)	+	Charlie25	DNA/hAT-Charlie	1125	1297	(1227)	1244325
233	10.0	0.0	0.0	chr14	99821677	99821706	(7222012)	C	SVA_F	Retroposon/SVA	(1018)	357	328	1250691
271	14.9	0.0	2.1	chr14	99821707	99821723	(7221995)	+	AluYj4	SINE/Alu	232	277	(34)	1250692
432	30.6	11.8	7.2	chr14	99821936	99822280	(7221438)	+	MamRTE1	LINE/RTE-BovB	3450	3812	(0)	1250693
27	0.0	0.0	0.0	chr14	100104903	100104928	(6938790)	+	(T)n	Simple_repeat	1	26	(0)	1251211
38	23.2	5.4	3.4	chr14	100238902	100239067	(6804651)	+	(GAGGC)n	Simple_repeat	1	175	(0)	1251501
22	26.9	2.2	7.1	chr14	100239703	100239839	(6803879)	+	(GGC)n	Simple_repeat	1	140	(0)	1251505
32	17.2	3.3	4.2	chr14	100240046	100240137	(6803581)	+	(GGC)n	Simple_repeat	1	95	(0)	1251506
510	25.0	8.8	1.0	chr14	100422540	100422810	(6620908)	C	L1ME3Cz	LINE/L1	(660)	337	142	1251839
355	31.9	13.8	0.5	chr14	100476043	100476256	(6567462)	C	MIRb	SINE/MIR	(0)	268	22	1251925
285	32.0	13.2	1.5	chr14	100476592	100476791	(6566927)	+	MIRb	SINE/MIR	28	254	(14)	1251926
14	16.8	5.9	3.7	chr14	101980964	101981014	(5062704)	+	(CCTCTT)n	Simple_repeat	1	54	(0)	1253999
14	14.9	5.4	0.0	chr14	102086933	102086969	(4956749)	+	(CCCCAGT)n	Simple_repeat	1	39	(0)	1254193
22	22.7	0.0	1.7	chr14	102319768	102319825	(4723893)	+	(GGC)n	Simple_repeat	1	58	(0)	1254667
2452	6.8	0.3	0.0	chr14	103010750	103011043	(4032675)	+	AluY	SINE/Alu	1	295	(16)	1256028
456	28.3	0.9	0.0	chr14	103921710	103921822	(3121896)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1257798
390	27.5	4.4	2.5	chr14	105024876	105025057	(2018661)	C	MLT1H	LTR/ERVL-MaLR	(5)	574	384	1259112
294	21.1	5.3	1.4	chr14	105025127	105025198	(2018520)	C	MLT1H	LTR/ERVL-MaLR	(340)	149	75	1259112
2237	9.9	0.0	1.0	chr14	105025242	105025533	(2018185)	C	AluSx1	SINE/Alu	(23)	289	1	1259113
7893	6.4	1.2	0.8	chr14	106491369	106492371	(551347)	C	LTR13	LTR/ERVK	(0)	1007	1	1260746
1052	15.8	0.0	1.3	chr15	32824597	32824754	(69166435)	C	FRAM	SINE/Alu	(17)	159	4	1280465
982	34.4	16.1	4.2	chr15	32824801	32825726	(69165463)	+	L2b	LINE/L2	2327	3371	(4)	1280466
213	33.1	5.5	3.5	chr15	32870818	32870958	(69120231)	+	UCON132b	DNA/hAT-Tip100	5	148	(0)	1280529
1608	25.1	4.0	2.5	chr15	33097650	33098197	(68892992)	+	L1ME4a	LINE/L1	2380	2935	(3211)	1280847
691	30.2	5.5	3.5	chr15	33098286	33098680	(68892509)	+	HAL1	LINE/L1	480	882	(1625)	1280848
19	11.7	0.0	0.0	chr15	33152789	33152816	(68838373)	+	(A)n	Simple_repeat	1	28	(0)	1280916
247	31.9	0.9	3.3	chr15	33155305	33155421	(68835768)	+	MIRc	SINE/MIR	80	190	(40)	1280917
968	28.4	13.9	2.7	chr15	33861257	33861738	(68129451)	+	L2	LINE/L2	1507	2051	(1368)	1281853
2014	7.7	0.0	0.4	chr15	34224529	34224776	(67766413)	C	AluSq2	SINE/Alu	(16)	297	51	1282509
2254	11.5	4.5	3.5	chr15	34588273	34588649	(67402540)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1283072
332	34.8	4.1	1.4	chr15	36590862	36591004	(65400185)	C	Tigger12	DNA/TcMar-Tigger	(2284)	191	45	1285896
20	22.6	0.0	0.0	chr15	37097897	37097938	(64893251)	+	(CA)n	Simple_repeat	1	42	(0)	1286501
12	21.5	2.1	4.2	chr15	37098212	37098258	(64892931)	+	G-rich	Low_complexity	1	48	(0)	1286502
22	19.0	0.0	0.0	chr15	37100568	37100609	(64890580)	+	G-rich	Low_complexity	1	42	(0)	1286511
33	14.5	0.0	0.0	chr15	37100691	37100744	(64890445)	+	(GT)n	Simple_repeat	1	54	(0)	1286512
18	17.3	0.0	2.8	chr15	37100727	37100762	(64890427)	+	(GC)n	Simple_repeat	1	36	(0)	1286513
23	17.4	4.9	1.9	chr15	37100766	37100818	(64890371)	+	GA-rich	Low_complexity	1	54	(0)	1286514
22	7.4	0.0	0.0	chr15	37111110	37111138	(64880051)	+	(GT)n	Simple_repeat	1	29	(0)	1286531
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
318	30.4	5.9	1.8	chr15	38884046	38884159	(63107030)	+	LTR67B	LTR/ERVL	53	171	(449)	1288967
272	35.7	8.5	5.6	chr15	38894620	38894904	(63096285)	C	L2c	LINE/L2	(2)	3385	3092	1288983
792	23.1	15.0	1.4	chr15	39102451	39102740	(62888449)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	167	1289249
1724	16.0	3.4	4.4	chr15	39102741	39102975	(62888214)	+	THE1D	LTR/ERVL-MaLR	1	234	(147)	1289250
9849	6.7	1.8	0.2	chr15	39261761	39263900	(62727289)	+	L1PA6	LINE/L1	3973	6133	(21)	1289463
531	26.4	8.2	1.0	chr15	39782997	39783199	(62207990)	+	MIRc	SINE/MIR	31	249	(19)	1290164
2285	6.8	0.7	1.0	chr15	39933500	39933794	(62057395)	+	AluSc	SINE/Alu	1	294	(15)	1290416
1717	19.1	0.3	2.8	chr15	40190324	40190642	(61800547)	+	AluJr	SINE/Alu	1	311	(1)	1290833
2749	16.8	15.6	3.9	chr15	40190643	40190888	(61800301)	C	MER44C	DNA/TcMar-Tigger	(344)	389	127	1290832
2187	12.7	0.0	0.0	chr15	40190889	40191187	(61800002)	C	AluSz6	SINE/Alu	(13)	299	1	1290834
252	29.1	8.5	0.0	chr15	40694881	40694966	(61296223)	+	SVA_A	Retroposon/SVA	218	311	(1076)	1291741
528	14.0	0.0	0.0	chr15	40694892	40695002	(61296187)	C	FRAM	SINE/Alu	(81)	221	1	1291742
12	8.9	4.2	0.0	chr15	41116515	41116538	(60874651)	+	(AGG)n	Simple_repeat	1	25	(0)	1292536
2566	6.3	0.0	0.0	chr15	41402729	41403029	(60588160)	C	AluSg	SINE/Alu	(9)	301	1	1293269
2484	6.6	0.3	0.0	chr15	41544448	41544749	(60446440)	C	AluSx1	SINE/Alu	(9)	303	1	1293600
246	40.6	4.9	0.0	chr15	41944601	41944775	(60046414)	C	MIRc	SINE/MIR	(48)	220	37	1294282
19	21.6	1.6	4.6	chr15	44195183	44195246	(57795943)	+	(CCT)n	Simple_repeat	1	65	(0)	1298354
320	26.4	10.9	14.4	chr15	44215990	44216064	(57775125)	C	MER5B	DNA/hAT-Charlie	(0)	178	98	1298403
49	0.0	0.0	0.0	chr15	44216065	44216106	(57775083)	+	(AT)n	Simple_repeat	1	42	(0)	1298404
320	26.4	10.9	14.4	chr15	44216107	44216211	(57774978)	C	MER5B	DNA/hAT-Charlie	(81)	97	5	1298403
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
189	21.2	12.0	0.0	chr15	44711158	44711223	(57279966)	+	MIR3	SINE/MIR	75	149	(59)	1299426
15	18.4	2.7	0.0	chr15	48178231	48178267	(53812922)	+	(CCG)n	Simple_repeat	1	38	(0)	1304453
12	19.9	1.3	11.2	chr15	48178379	48178457	(53812732)	+	(GAGCTGG)n	Simple_repeat	1	80	(0)	1304454
63	0.0	0.0	0.0	chr15	48547722	48547775	(53443414)	+	(CA)n	Simple_repeat	1	54	(0)	1304963
534	30.8	9.2	2.6	chr15	48694849	48695121	(53296068)	+	L2a	LINE/L2	3133	3425	(1)	1305179
433	28.7	9.4	2.4	chr15	48695394	48695561	(53295628)	+	MIRb	SINE/MIR	9	189	(79)	1305181
187	20.8	0.0	9.4	chr15	48703899	48703951	(53287238)	C	L2a	LINE/L2	(5)	3421	3374	1305196
527	26.6	13.3	4.2	chr15	48723341	48723599	(53267590)	C	MLT1L	LTR/ERVL-MaLR	(324)	286	1	1305224
382	38.5	10.4	2.1	chr15	48925714	48926180	(53065009)	C	L2a	LINE/L2	(585)	2834	2325	1305541
864	23.1	8.7	0.9	chr15	50166009	50166329	(51824860)	+	L1MEg	LINE/L1	1820	2164	(4576)	1307203
427	31.4	10.5	6.7	chr15	50819051	50819425	(51171764)	C	HAL1b	LINE/L1	(1461)	960	570	1308600
17	26.7	0.0	0.0	chr15	50908730	50908778	(51082411)	+	(GGC)n	Simple_repeat	1	49	(0)	1308765
466	18.3	10.9	9.7	chr15	51726681	51726825	(50264364)	+	MLT1K	LTR/ERVL-MaLR	449	595	(0)	1309973
259	17.6	24.4	3.4	chr15	51972103	51972154	(50019035)	C	Charlie1	DNA/hAT-Charlie	(0)	2781	2729	1310411
193	23.5	7.3	0.0	chr15	52093951	52094001	(49897188)	C	MIR	SINE/MIR	(4)	258	204	1310706
203	17.3	3.7	0.0	chr15	52103400	52103451	(49887738)	+	L2	LINE/L2	2079	2132	(1287)	1310720
270	33.9	10.2	4.2	chr15	52144073	52144337	(49846852)	+	L4_C_Mam	LINE/RTE-X	4531	4813	(325)	1310803
18	25.2	1.4	4.2	chr15	55743137	55743207	(46247982)	+	(CGG)n	Simple_repeat	1	72	(0)	1316089
264	29.4	0.0	0.0	chr15	55908181	55908248	(46082941)	C	L2a	LINE/L2	(0)	3426	3359	1316402
19	16.6	7.3	4.5	chr15	57485995	57486076	(44505113)	+	(AGTCAGG)n	Simple_repeat	1	88	(0)	1318763
572	23.7	1.5	0.0	chr15	58203465	58203595	(43787594)	+	L1MB7	LINE/L1	6534	6666	(16)	1319758
1126	29.9	7.2	5.7	chr15	58203610	58204243	(43786946)	+	L1ME5	LINE/L1	5551	6194	(0)	1319761
193	36.2	0.0	0.0	chr15	58547279	58547347	(43443842)	+	MIRc	SINE/MIR	69	137	(131)	1320369
23	13.3	3.9	1.9	chr15	59689362	59689412	(42301777)	+	(GGC)n	Simple_repeat	1	53	(0)	1322574
190	30.6	0.0	0.0	chr15	60371709	60371757	(41619432)	C	MIR1_Amn	SINE/MIR	(122)	108	60	1323664
2165	9.9	1.1	0.0	chr15	60371871	60372153	(41619036)	+	AluSp	SINE/Alu	2	287	(26)	1323665
231	37.0	1.4	1.4	chr15	60379610	60379749	(41611440)	+	MIRb	SINE/MIR	120	259	(9)	1323677
331	28.6	1.6	0.9	chr15	60391134	60391257	(41599932)	C	MIRc	SINE/MIR	(101)	129	1	1323695
19	0.0	0.0	0.0	chr15	60392943	60392963	(41598226)	+	(A)n	Simple_repeat	1	21	(0)	1323697
2521	9.6	0.0	0.7	chr15	60402098	60402400	(41588789)	+	AluSc	SINE/Alu	2	302	(7)	1323717
194	16.4	8.9	15.3	chr15	60402457	60402528	(41588661)	+	L2a	LINE/L2	3313	3418	(8)	1323718
450	33.4	22.3	4.9	chr15	60402667	60403161	(41588028)	+	L2c	LINE/L2	2766	3348	(39)	1323719
633	36.5	6.1	3.5	chr15	62290897	62291293	(39699896)	C	L3	LINE/CR1	(133)	3966	3559	1326639
850	27.5	16.2	2.6	chr15	62291360	62291825	(39699364)	C	L3	LINE/CR1	(2759)	1340	799	1326640
2061	10.8	7.1	0.0	chr15	62402960	62403246	(39587943)	+	AluSg	SINE/Alu	1	309	(1)	1326847
1377	26.3	22.6	2.8	chr15	62403247	62403404	(39587785)	+	L2a	LINE/L2	1811	1961	(1458)	1326844
818	12.3	9.0	0.0	chr15	62403407	62403528	(39587661)	C	AluSz6	SINE/Alu	(174)	138	5	1326848
2243	10.1	0.3	3.2	chr15	62606083	62606390	(39384799)	C	AluSx1	SINE/Alu	(13)	299	1	1327172
332	28.3	13.6	4.5	chr15	62606718	62606917	(39384272)	+	MIRb	SINE/MIR	26	246	(22)	1327173
397	21.5	12.2	3.3	chr15	62894989	62895238	(39095951)	C	L1MEh	LINE/L1	(3818)	2328	2032	1327577
452	24.2	5.2	3.8	chr15	62895244	62895259	(39095930)	C	LTR16E2	LTR/ERVL	(0)	568	547	1327582
34	0.0	0.0	0.0	chr15	62895260	62895288	(39095901)	+	(AC)n	Simple_repeat	1	29	(0)	1327583
452	24.2	5.2	3.8	chr15	62895289	62895404	(39095785)	C	LTR16E2	LTR/ERVL	(22)	546	435	1327582
262	30.2	8.5	7.9	chr15	62895472	62895611	(39095578)	C	L1MEi	LINE/L1	(2059)	153	13	1327584
33	18.8	5.9	1.9	chr15	62940709	62940809	(39050380)	+	(TCTG)n	Simple_repeat	1	107	(0)	1327658
361	30.0	9.6	2.2	chr15	63072872	63073055	(38918134)	+	MIR	SINE/MIR	35	233	(29)	1327897
2078	13.6	0.0	1.4	chr15	63073081	63073375	(38917814)	+	AluSz	SINE/Alu	1	291	(21)	1327898
2344	7.8	1.0	0.3	chr15	63096860	63097155	(38894034)	C	AluSp	SINE/Alu	(15)	298	1	1327944
13	16.8	0.0	5.4	chr15	63189497	63189533	(38801656)	+	(GGCGG)n	Simple_repeat	1	37	(0)	1328138
735	28.0	6.9	0.7	chr15	63236195	63236478	(38754711)	C	Charlie26a	DNA/hAT-Charlie	(6)	319	17	1328210
347	22.5	0.0	4.8	chr15	63236516	63236599	(38754590)	C	Tigger15a	DNA/TcMar-Tigger	(201)	514	435	1328211
7167	9.1	2.5	0.4	chr15	63236623	63238155	(38753034)	C	L1MA3	LINE/L1	(10)	6295	4732	1328212
14	12.1	0.0	3.5	chr15	63833955	63833983	(38157206)	+	(GGC)n	Simple_repeat	1	29	(0)	1329210
12	23.3	3.7	3.6	chr15	64163069	64163122	(37828067)	+	G-rich	Low_complexity	1	56	(0)	1329876
412	21.4	1.2	0.5	chr15	64378438	64378534	(37612655)	C	FLAM_C	SINE/Alu	(171)	131	37	1330250
2272	10.5	0.0	0.0	chr15	64378632	64378925	(37612264)	+	AluSg	SINE/Alu	2	295	(15)	1330251
13	16.6	2.2	6.4	chr15	64841566	64841611	(37149578)	+	(CGCCC)n	Simple_repeat	1	47	(0)	1331337
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
2073	4.4	0.7	12.4	chr15	65296541	65296879	(36694310)	+	AluY	SINE/Alu	4	302	(9)	1332325
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
1917	23.0	4.8	2.1	chr15	66997194	66998019	(34993170)	C	L1M4	LINE/L1	(461)	5703	4846	1335852
393	29.3	7.3	2.1	chr15	67044060	67044125	(34947064)	+	MIRb	SINE/MIR	179	252	(16)	1335961
269	23.4	2.9	3.0	chr15	67107067	67107155	(34884034)	+	L2a	LINE/L2	3290	3425	(1)	1336086
230	5.0	9.1	2.4	chr15	67107230	67107270	(34883919)	C	MamTip2	DNA/hAT-Tip100	(156)	149	106	1336085
593	26.5	12.7	2.0	chr15	67128299	67128502	(34862687)	+	MIRb	SINE/MIR	12	240	(28)	1336119
17	3.7	6.7	3.1	chr15	67147148	67147177	(34844012)	+	(GA)n	Simple_repeat	1	32	(0)	1336157
17	7.8	0.0	0.0	chr15	67150477	67150503	(34840686)	+	(AAAG)n	Simple_repeat	1	27	(0)	1336160
2293	8.1	0.0	7.2	chr15	67150799	67151158	(34840031)	C	AluSx1	SINE/Alu	(0)	312	1	1336161
4150	14.6	6.3	3.7	chr15	67530931	67531979	(34459210)	+	L1MB8	LINE/L1	5119	6174	(4)	1336759
250	37.5	0.0	3.7	chr15	68335219	68335326	(33655863)	+	MIR3	SINE/MIR	51	154	(54)	1338157
2298	9.0	0.3	0.3	chr15	68352191	68352491	(33638698)	C	AluSz6	SINE/Alu	(10)	302	2	1338183
473	25.0	7.3	10.9	chr15	68352492	68352543	(33638646)	+	MER5B	DNA/hAT-Charlie	116	176	(2)	1338180
598	31.8	4.2	7.0	chr15	68352544	68352779	(33638410)	C	MamTip1	DNA/hAT-Tip100	(27)	240	5	1338179
37	29.5	0.0	0.0	chr15	69761265	69761315	(32229874)	+	(ATCC)n	Simple_repeat	1	51	(0)	1340864
433	33.8	7.1	1.9	chr15	70319063	70319330	(31671859)	+	Plat_L3	LINE/CR1	2674	2956	(630)	1341935
17	9.1	2.6	5.0	chr15	70493087	70493125	(31498064)	+	(CCCCA)n	Simple_repeat	1	40	(0)	1342252
464	28.6	5.7	2.9	chr15	70792255	70792391	(31198798)	+	MIR3	SINE/MIR	43	183	(25)	1342746
487	27.6	10.2	2.5	chr15	70856452	70856696	(31134493)	+	Charlie16a	DNA/hAT-Charlie	64	329	(13)	1342872
212	25.6	5.5	4.4	chr15	70857119	70857208	(31133981)	+	L3b	LINE/CR1	4940	5030	(202)	1342873
548	23.9	4.2	0.7	chr15	71237511	71237649	(30753540)	+	MER5A1	DNA/hAT-Charlie	5	148	(18)	1343412
241	29.9	2.8	2.8	chr15	71252163	71252303	(30738886)	C	UCON43	Unknown	(6)	166	26	1343442
383	30.3	5.0	4.1	chr15	71295169	71295364	(30695825)	C	MIRb	SINE/MIR	(66)	202	5	1343503
315	28.0	4.0	0.0	chr15	71295516	71295628	(30695561)	+	MIR3	SINE/MIR	40	155	(113)	1343504
238	20.4	0.0	8.5	chr15	71295632	71295690	(30695499)	C	MER5B	DNA/hAT-Charlie	(0)	178	125	1343505
2557	20.8	5.7	1.4	chr15	71295719	71296288	(30694901)	C	L1MB8	LINE/L1	(60)	6118	5523	1343506
206	29.8	3.6	5.1	chr15	71752549	71752693	(30238496)	+	MIRc	SINE/MIR	6	145	(123)	1344296
812	1.1	0.0	0.0	chr15	72228377	72228464	(29762725)	C	AluYc	SINE/Alu	(11)	288	201	1345104
911	8.8	0.0	5.1	chr15	72237723	72237878	(29753311)	+	L1MA3	LINE/L1	6158	6305	(0)	1345118
25	21.0	0.0	1.6	chr15	73633270	73633331	(28357858)	+	G-rich	Low_complexity	1	62	(0)	1347427
317	23.7	3.0	5.8	chr15	73634127	73634229	(28356960)	C	L2c	LINE/L2	(15)	3372	3273	1347429
16	19.4	1.7	6.6	chr15	73924656	73924716	(28066473)	+	(TCCC)n	Simple_repeat	1	58	(0)	1347950
14	14.1	0.0	3.0	chr15	73983502	73983534	(28007655)	+	(CCTTC)n	Simple_repeat	1	33	(0)	1348049
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
196	19.1	2.1	2.1	chr15	74614990	74615037	(27376152)	+	MIRc	SINE/MIR	122	169	(99)	1349183
3693	15.8	4.0	5.0	chr15	75107797	75108379	(26882810)	+	Looper	DNA/PiggyBac	165	765	(792)	1350192
1581	21.6	10.0	4.0	chr15	75720937	75721058	(26270131)	C	L1MC4	LINE/L1	(635)	7407	7294	1351405
15	24.4	2.9	4.3	chr15	75721084	75721151	(26270038)	+	GA-rich	Low_complexity	1	70	(0)	1351410
1748	15.2	4.4	0.0	chr15	75903475	75903756	(26087433)	+	AluJb	SINE/Alu	2	296	(16)	1351719
784	21.0	5.8	0.0	chr15	78093290	78093451	(23897738)	+	MER45A	DNA/hAT-Tip100	1	172	(6)	1355188
230	27.4	0.0	0.0	chr15	78093669	78093719	(23897470)	C	MER91A	DNA/hAT-Tip100	(145)	51	1	1355189
413	26.7	11.1	0.6	chr15	78302593	78302754	(23688435)	+	MER112	DNA/hAT-Charlie	81	261	(0)	1355602
22	20.2	3.7	4.8	chr15	80404293	80404373	(21586816)	+	GA-rich	Low_complexity	1	84	(0)	1359476
19	26.2	1.2	5.8	chr15	80404332	80404417	(21586772)	+	(GGC)n	Simple_repeat	1	87	(0)	1359477
1847	12.6	4.6	0.7	chr15	80849010	80849280	(21141909)	C	AluSz	SINE/Alu	(30)	282	1	1360217
285	31.5	14.3	1.8	chr15	80849294	80849513	(21141676)	+	L2	LINE/L2	2346	2597	(822)	1360218
185	24.2	8.3	9.2	chr15	80849518	80849626	(21141563)	+	MIR3	SINE/MIR	50	157	(51)	1360219
2078	10.1	1.4	0.4	chr15	80955643	80955920	(21035269)	C	AluSx	SINE/Alu	(30)	282	2	1360418
1433	15.5	0.0	0.0	chr15	80956000	80956218	(21034971)	+	AluJb	SINE/Alu	93	311	(1)	1360419
15	12.7	6.4	4.0	chr15	81000953	81000999	(20990190)	+	(CGGCGG)n	Simple_repeat	1	50	(0)	1360519
13	13.5	6.1	0.0	chr15	81092591	81092623	(20898566)	+	GA-rich	Low_complexity	1	35	(0)	1360690
593	28.9	8.8	0.5	chr15	81504071	81504258	(20486931)	+	MER63A	DNA/hAT-Blackjack	3	207	(3)	1361387
2744	19.9	4.6	1.9	chr15	82093782	82094459	(19896730)	+	Tigger7	DNA/TcMar-Tigger	2	705	(0)	1362343
938	18.2	4.1	1.6	chr15	84658610	84658828	(17332361)	C	AluJb	SINE/Alu	(0)	312	87	1366359
235	31.6	3.1	9.9	chr15	84948315	84948486	(17042703)	+	MLT1O	LTR/ERVL-MaLR	6	165	(377)	1366984
230	28.8	1.7	0.0	chr15	84981097	84981155	(17010034)	C	MIR	SINE/MIR	(168)	94	35	1367055
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
186	22.8	0.0	9.5	chr15	85358212	85358274	(16632915)	C	OldhAT1	DNA/hAT-Ac	(579)	2269	2213	1367677
424	30.8	15.7	0.0	chr15	85668292	85668473	(16322716)	+	L3	LINE/CR1	3850	4065	(34)	1368156
14	25.4	3.1	3.0	chr15	88546596	88546659	(13444530)	+	(GCCCCT)n	Simple_repeat	1	66	(0)	1372570
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
193	24.8	11.4	6.4	chr15	89782104	89782228	(12208961)	+	MIR3	SINE/MIR	7	138	(70)	1374871
4195	11.7	4.3	1.0	chr15	89782290	89782735	(12208454)	+	MER41B	LTR/ERV1	2	449	(185)	1374872
16	0.0	0.0	0.0	chr15	90680746	90680762	(11310427)	+	(A)n	Simple_repeat	1	17	(0)	1376857
2270	12.1	0.0	0.0	chr15	90681810	90682107	(11309082)	+	AluSx	SINE/Alu	1	298	(14)	1376858
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
1068	14.2	1.2	0.0	chr15	91022702	91022863	(10968326)	+	AluSx3	SINE/Alu	145	308	(3)	1377543
426	22.4	0.0	0.0	chr15	95559825	95559900	(6431289)	+	MER44A	DNA/TcMar-Tigger	1	76	(263)	1384632
1476	20.6	0.0	0.0	chr15	95559902	95560173	(6431016)	C	MER44B	DNA/TcMar-Tigger	(204)	346	75	1384633
1617	15.1	2.2	8.0	chr15	95560172	95560510	(6430679)	+	Tigger7	DNA/TcMar-Tigger	2147	2465	(26)	1384634
16	14.2	0.0	0.0	chr15	99251078	99251108	(2740081)	+	(GAAT)n	Simple_repeat	1	31	(0)	1389846
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
807	26.7	14.0	5.8	chr15	99253467	99254066	(2737123)	C	L2b	LINE/L2	(346)	3073	2417	1389850
13	17.4	0.0	2.9	chr15	99425410	99425443	(2565746)	+	G-rich	Low_complexity	1	34	(0)	1390099
14	10.5	6.5	0.0	chr15	99476739	99476769	(2514420)	+	(CAGC)n	Simple_repeat	1	33	(0)	1390168
359	33.7	3.2	3.7	chr15	100765576	100765763	(1225426)	+	MIRb	SINE/MIR	77	263	(5)	1391912
566	24.0	3.5	0.6	chr15	101267330	101267508	(723681)	+	MLT1H	LTR/ERVL-MaLR	20	168	(321)	1392565
419	31.8	4.2	6.0	chr15	101267764	101268031	(723158)	+	LTR89	LTR/ERVL?	531	793	(86)	1392566
2149	6.2	0.0	5.2	chr16	137552	137840	(90200505)	C	AluSx	SINE/Alu	(14)	298	25	1394233
29	0.0	0.0	0.0	chr16	138719	138745	(90199600)	+	(GGCGCA)n	Simple_repeat	1	27	(0)	1394234
2482	6.3	0.0	0.0	chr16	401146	401447	(89936898)	C	AluSg	SINE/Alu	(8)	302	1	1394693
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
15	18.9	2.3	2.2	chr16	668148	668191	(89670154)	+	(GGTCCG)n	Simple_repeat	1	45	(0)	1395064
13	28.1	0.0	4.9	chr16	668250	668310	(89670035)	+	G-rich	Low_complexity	1	61	(0)	1395065
328	35.3	8.8	0.0	chr16	1002490	1002707	(89335638)	+	L1MB7	LINE/L1	5737	5975	(209)	1395397
261	34.3	3.6	5.6	chr16	1002724	1002865	(89335480)	+	L1MB7	LINE/L1	6028	6166	(8)	1395397
242	27.9	17.2	0.9	chr16	1959282	1959393	(88378952)	+	L2a	LINE/L2	3267	3400	(26)	1396716
12	13.1	2.7	5.3	chr16	2047761	2047797	(88290548)	+	(CGGCTC)n	Simple_repeat	1	38	(0)	1396835
13	19.5	0.0	2.7	chr16	2048028	2048064	(88290281)	+	(GCGCG)n	Simple_repeat	1	37	(0)	1396836
27	18.1	8.6	3.6	chr16	2155886	2155938	(88182407)	+	G-rich	Low_complexity	1	50	(0)	1396968
26	0.0	0.0	0.0	chr16	2520252	2520276	(87818069)	+	(GGGC)n	Simple_repeat	1	25	(0)	1397563
406	31.6	0.7	1.3	chr16	2835690	2835843	(87502502)	C	MIRb	SINE/MIR	(0)	268	116	1398002
12	9.1	4.2	0.0	chr16	3021857	3021880	(87316465)	+	(CATT)n	Simple_repeat	1	25	(0)	1398345
1487	17.6	0.0	1.2	chr16	3156951	3157195	(87181150)	C	AluJb	SINE/Alu	(10)	302	61	1398613
654	1.4	0.0	0.0	chr16	3157405	3157477	(87180868)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	1398614
2018	10.1	1.4	1.7	chr16	3182232	3182528	(87155817)	+	AluSx	SINE/Alu	3	298	(14)	1398677
622	0.0	0.0	0.0	chr16	3182635	3182706	(87155639)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1398678
622	0.0	0.0	0.0	chr16	3189634	3189705	(87148640)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	1398695
353	26.7	9.0	0.8	chr16	3364686	3364817	(86973528)	+	MIR	SINE/MIR	97	240	(22)	1399059
18	19.7	2.7	6.7	chr16	3717380	3717452	(86620893)	+	(GCCC)n	Simple_repeat	1	75	(0)	1399696
12	22.3	0.0	7.4	chr16	3717424	3717477	(86620868)	+	(CCGGCG)n	Simple_repeat	1	54	(0)	1399697
189	22.0	0.0	3.9	chr16	4271706	4271757	(86066588)	+	AmnSINE1	SINE/5S-Deu-L2	76	125	(450)	1400801
17	10.0	0.0	2.9	chr16	4299314	4299347	(86038998)	+	(CCCAGC)n	Simple_repeat	1	34	(0)	1400887
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
21	15.3	6.7	1.6	chr16	4614800	4614859	(85723486)	+	(CGCCTCC)n	Simple_repeat	1	64	(0)	1401530
12	23.0	0.0	4.5	chr16	4614903	4614946	(85723399)	+	(CGCCT)n	Simple_repeat	1	44	(0)	1401531
16	15.1	6.8	0.0	chr16	4694053	4694096	(85644249)	+	(GGCCTG)n	Simple_repeat	1	47	(0)	1401669
17	20.7	5.7	2.7	chr16	4694370	4694439	(85643906)	+	G-rich	Low_complexity	1	74	(0)	1401670
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
16	17.4	4.3	2.0	chr16	4768720	4768766	(85569579)	+	(CGCCC)n	Simple_repeat	1	49	(0)	1401819
367	31.5	8.0	4.1	chr16	4915455	4915623	(85422722)	C	MIR	SINE/MIR	(56)	206	31	1402127
658	19.6	1.5	8.6	chr16	4915700	4915900	(85422445)	C	MIRc	SINE/MIR	(0)	262	56	1402128
397	20.0	10.3	4.5	chr16	4945137	4945246	(85393099)	C	MamRep38	DNA/hAT	(21)	274	158	1402200
1014	26.2	9.4	2.2	chr16	5034049	5034500	(85303845)	C	L1MC4	LINE/L1	(0)	8042	7555	1402426
871	25.4	5.0	3.4	chr16	10862094	10862451	(79475894)	+	MER113	DNA/hAT-Charlie	153	516	(5)	1414422
527	30.3	4.3	0.6	chr16	10862535	10862690	(79475655)	C	MIR3	SINE/MIR	(9)	199	38	1414423
1272	22.8	4.2	1.4	chr16	10862808	10863158	(79475187)	C	L1MEf	LINE/L1	(4644)	1598	1238	1414424
13	33.0	1.7	0.0	chr16	10944605	10944664	(79393681)	+	(CCG)n	Simple_repeat	1	61	(0)	1414616
1097	11.0	1.9	6.3	chr16	10992153	10992375	(79345970)	C	L1MA6	LINE/L1	(177)	6123	5911	1414718
205	30.9	6.7	2.3	chr16	11080167	11080252	(79258093)	C	L2b	LINE/L2	(29)	3346	3257	1414881
189	27.4	3.8	0.0	chr16	11202125	11202175	(79136170)	C	L2b	LINE/L2	(200)	3175	3123	1415096
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
24	29.2	0.0	5.8	chr16	14071388	14071446	(76266899)	+	G-rich	Low_complexity	1	120	(0)	1421472
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
2246	10.8	0.0	1.0	chr16	15591311	15591594	(74746751)	+	AluSc	SINE/Alu	1	282	(27)	1424783
1641	13.0	9.5	3.2	chr16	17516030	17516313	(72822032)	C	AluJo	SINE/Alu	(7)	305	2	1429258
2520	9.5	1.1	0.0	chr16	17518158	17518504	(72819841)	C	L1PB1	LINE/L1	(1)	6150	5800	1429267
43	0.0	0.0	0.0	chr16	17803607	17803645	(72534700)	+	(T)n	Simple_repeat	1	39	(0)	1429862
316	32.5	8.6	4.1	chr16	17803650	17803893	(72534452)	C	HAL1	LINE/L1	(1604)	903	648	1429863
507	31.4	6.8	6.5	chr16	17836872	17837239	(72501106)	+	MLT1I	LTR/ERVL-MaLR	39	407	(4)	1429925
492	22.4	3.2	2.5	chr16	17837375	17837531	(72500814)	C	MIR3	SINE/MIR	(52)	156	2	1429926
2345	8.3	0.7	0.7	chr16	18790551	18790839	(71547506)	C	AluSc	SINE/Alu	(14)	295	7	1431958
13	16.5	0.0	0.0	chr16	19523968	19523994	(70814351)	+	GA-rich	Low_complexity	1	27	(0)	1433773
780	13.1	3.0	1.5	chr16	21300547	21300678	(69037667)	+	LTR57	LTR/ERVL	270	403	(8)	1437613
401	11.8	4.2	0.0	chr16	21300682	21300749	(69037596)	C	LTR41B	LTR/ERVL	(581)	177	107	1437614
2358	7.5	0.0	1.0	chr16	22387508	22387519	(67950826)	C	AluY	SINE/Alu	(19)	292	282	1439946
27	0.0	0.0	0.0	chr16	22387520	22387545	(67950800)	+	(TATT)n	Simple_repeat	1	26	(0)	1439947
2286	4.9	3.8	2.8	chr16	23727527	23727813	(66610532)	C	AluSq2	SINE/Alu	(23)	290	1	1442964
254	31.0	12.0	5.5	chr16	24635683	24635938	(65702407)	C	L1MD	LINE/L1	(1843)	4303	4029	1445157
316	28.8	0.0	1.8	chr16	24636009	24636121	(65702224)	C	L2	LINE/L2	(1388)	2031	1921	1445158
281	30.2	0.0	2.3	chr16	24636139	24636267	(65702078)	C	L1MC	LINE/L1	(2182)	3964	3839	1445159
217	20.4	5.3	0.0	chr16	24636268	24636321	(65702024)	C	L2a	LINE/L2	(0)	3426	3370	1445160
8652	15.6	5.5	4.0	chr16	24646025	24646916	(65691429)	C	Charlie5	DNA/hAT-Charlie	(683)	1941	1018	1445179
21	29.2	0.0	0.0	chr16	24669760	24669826	(65668519)	+	(TAATAG)n	Simple_repeat	1	67	(0)	1445240
876	27.0	2.5	3.7	chr16	24669836	24669941	(65668404)	C	MIR	SINE/MIR	(0)	262	155	1445241
319	17.4	15.8	0.0	chr16	25107357	25107425	(65230920)	C	LTR53-int	LTR/ERVL	(1853)	1476	1395	1446219
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
20	16.1	5.3	1.7	chr16	29805896	29805952	(60532393)	+	(CTCGCG)n	Simple_repeat	1	60	(0)	1456607
21	4.1	0.0	0.0	chr16	29899108	29899132	(60439213)	+	(T)n	Simple_repeat	1	25	(0)	1456815
14	16.4	2.2	5.5	chr16	30112812	30112858	(60225487)	+	G-rich	Low_complexity	1	45	(0)	1457286
351	23.1	6.1	0.0	chr16	30112891	30112998	(60225347)	C	MER91C	DNA/hAT-Tip100	(22)	118	4	1457287
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
16	19.6	0.0	5.8	chr16	30526709	30526760	(59811585)	+	(GCCCCC)n	Simple_repeat	1	52	(0)	1458285
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
13	27.9	1.7	3.3	chr16	30949046	30949105	(59389240)	+	(GCTCCG)n	Simple_repeat	1	61	(0)	1459271
2516	6.9	0.0	0.0	chr16	31095050	31095354	(59242991)	+	AluSx	SINE/Alu	1	305	(7)	1459584
2764	17.2	6.7	8.1	chr16	46789662	46789893	(43548452)	+	L1MA8	LINE/L1	3276	3497	(3229)	1466047
14	23.2	5.3	1.7	chr16	47461027	47461083	(42877262)	+	(GCC)n	Simple_repeat	1	60	(0)	1467211
12	20.8	3.6	5.3	chr16	48244255	48244309	(42094036)	+	(CGGAGG)n	Simple_repeat	1	57	(0)	1468422
252	29.5	1.9	15.3	chr16	48964335	48964458	(41373887)	+	L2b	LINE/L2	3263	3381	(6)	1469741
541	30.3	6.6	6.0	chr16	48964528	48964864	(41373481)	C	MER102c	DNA/hAT-Charlie	(6)	325	16	1469742
675	22.8	15.6	2.2	chr16	53091234	53091467	(37246878)	+	MIRb	SINE/MIR	1	262	(6)	1477208
16	11.7	5.1	2.4	chr16	53434429	53434486	(36903859)	+	(GGCG)n	Simple_repeat	1	59	(0)	1477844
14	22.5	0.0	0.0	chr16	53434604	53434654	(36903691)	+	GA-rich	Low_complexity	1	51	(0)	1477845
312	35.6	1.8	12.6	chr16	53821614	53821787	(36516558)	+	L2b	LINE/L2	1316	1472	(1947)	1478498
666	28.4	11.1	5.7	chr16	53821788	53822171	(36516174)	C	MLT1I	LTR/ERVL-MaLR	(4)	407	1	1478499
492	33.6	12.7	4.7	chr16	55471437	55471689	(34866656)	C	L2b	LINE/L2	(0)	3375	3100	1481491
485	18.6	2.2	16.2	chr16	55471759	55471918	(34866427)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	459	1481492
16	9.6	0.0	0.0	chr16	55500228	55500250	(34838095)	+	(CA)n	Simple_repeat	1	23	(0)	1481550
13	18.7	7.8	1.8	chr16	55503114	55503164	(34835181)	+	(GCAGG)n	Simple_repeat	1	55	(0)	1481558
15	3.8	0.0	9.1	chr16	56730007	56730039	(33608306)	+	(GCCCC)n	Simple_repeat	1	33	(0)	1483652
387	28.4	16.6	1.0	chr16	57462315	57462527	(32875818)	C	L1ME3G	LINE/L1	(344)	580	317	1485115
3271	15.3	1.4	1.1	chr16	58451917	58452477	(31885868)	C	MER34A1	LTR/ERV1	(0)	587	25	1487137
18	17.6	0.0	0.0	chr16	58734013	58734044	(31604301)	+	(GT)n	Simple_repeat	1	32	(0)	1487741
337	31.4	4.1	2.8	chr16	64428395	64428538	(25909807)	C	MLT1O	LTR/ERVL-MaLR	(185)	357	212	1496356
203	28.0	0.0	0.0	chr16	64478795	64478844	(25859501)	+	MIRc	SINE/MIR	78	127	(141)	1496432
17	15.7	6.7	3.1	chr16	65002497	65002556	(25335789)	+	(TTCCAT)n	Simple_repeat	1	64	(0)	1497245
328	27.8	2.2	0.8	chr16	65070735	65070868	(25267477)	+	Charlie19a	DNA/hAT-Charlie	187	322	(64)	1497360
264	26.8	15.1	0.3	chr16	65336470	65336603	(25001742)	C	MIR	SINE/MIR	(72)	196	47	1497792
464	26.1	5.7	2.8	chr16	66516691	66516905	(23821440)	C	L2a	LINE/L2	(25)	3401	3133	1499878
15	8.9	0.0	0.0	chr16	66934335	66934358	(23403987)	+	(GCC)n	Simple_repeat	1	24	(0)	1500709
1788	19.2	0.7	1.7	chr16	67268015	67268316	(23070029)	C	AluJo	SINE/Alu	(13)	299	1	1501343
679	17.2	0.0	1.6	chr16	67268326	67268447	(23069898)	C	AluJr	SINE/Alu	(11)	301	182	1501344
622	18.4	0.0	0.0	chr16	67268479	67268576	(23069769)	+	AluJo	SINE/Alu	200	297	(15)	1501345
62	0.0	0.0	0.0	chr16	67268659	67268711	(23069634)	+	(TA)n	Simple_repeat	1	53	(0)	1501346
1004	15.6	4.0	1.5	chr16	67268752	67268973	(23069372)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1501347
29	27.7	0.0	0.0	chr16	67311705	67311778	(23026567)	+	(GT)n	Simple_repeat	1	74	(0)	1501409
20	26.9	0.0	2.9	chr16	67562427	67562496	(22775849)	+	(CCCCT)n	Simple_repeat	1	70	(0)	1501890
12	28.1	1.9	1.9	chr16	67562503	67562555	(22775790)	+	(GCGCCG)n	Simple_repeat	1	54	(0)	1501891
13	8.1	0.0	6.7	chr16	67893187	67893216	(22445129)	+	(CCGCC)n	Simple_repeat	1	30	(0)	1502543
29	0.0	0.0	0.0	chr16	67893278	67893304	(22445041)	+	(GGC)n	Simple_repeat	1	27	(0)	1502544
16	0.0	0.0	0.0	chr16	68085196	68085212	(22253133)	+	(G)n	Simple_repeat	1	17	(0)	1502901
18	20.6	1.9	3.6	chr16	68264487	68264540	(22073805)	+	(CGG)n	Simple_repeat	1	55	(0)	1503253
286	24.3	3.4	6.5	chr16	69073432	69073554	(21264791)	+	L2c	LINE/L2	3269	3387	(0)	1505024
2088	9.3	0.0	2.0	chr16	69073676	69073976	(21264369)	+	AluSg	SINE/Alu	2	296	(14)	1505025
744	19.2	10.0	1.5	chr16	69477104	69477304	(20861041)	+	MLT1L	LTR/ERVL-MaLR	389	608	(2)	1505882
356	20.3	25.8	0.8	chr16	69477305	69477423	(20860922)	C	L4_B_Mam	LINE/RTE-X	(2954)	1987	1829	1505883
514	21.9	12.6	2.8	chr16	69477407	69477604	(20860741)	+	L1ME3A	LINE/L1	5954	6166	(7)	1505884
744	33.8	8.0	2.7	chr16	69477620	69478066	(20860279)	C	L4_B_Mam	LINE/RTE-X	(3119)	1822	1350	1505883
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
2054	9.2	4.7	0.3	chr16	71927219	71927502	(18410843)	+	AluSz	SINE/Alu	2	298	(14)	1510658
883	19.1	5.4	12.3	chr16	72537684	72538024	(17800321)	C	CR1-16_AMi	LINE/CR1	(4)	847	532	1511596
18	12.2	0.0	0.0	chr16	73172646	73172672	(17165673)	+	(GA)n	Simple_repeat	1	27	(0)	1512568
441	27.5	17.9	0.0	chr16	75305483	75305675	(15032670)	+	MIR	SINE/MIR	13	247	(15)	1516502
978	7.3	0.8	0.0	chr16	75623521	75623643	(14714702)	C	AluSx3	SINE/Alu	(4)	307	184	1517183
733	24.6	6.8	12.8	chr16	77834362	77834720	(12503625)	+	MLT1J1	LTR/ERVL-MaLR	63	398	(46)	1520574
299	34.1	0.0	3.1	chr16	77834866	77834992	(12503353)	+	MIR	SINE/MIR	119	241	(21)	1520575
588	28.2	3.0	7.3	chr16	77877923	77878167	(12460178)	C	Charlie13b	DNA/hAT-Charlie	(105)	407	174	1520662
245	23.0	6.6	8.1	chr16	77897260	77897382	(12440963)	+	MIRc	SINE/MIR	116	236	(32)	1520693
206	28.2	4.9	9.3	chr16	82654091	82654219	(7684126)	C	L2c	LINE/L2	(2)	3385	3263	1529604
560	27.7	17.2	6.5	chr16	82655119	82655633	(7682712)	C	L2c	LINE/L2	(0)	3426	2810	1529606
403	23.0	13.1	3.5	chr16	82655708	82655851	(7682494)	C	MIRc	SINE/MIR	(32)	236	77	1529607
364	24.1	10.2	1.4	chr16	83343954	83344062	(6994283)	C	MIRb	SINE/MIR	(109)	159	42	1530830
730	22.6	7.6	1.0	chr16	83403782	83403978	(6934367)	C	MER20B	DNA/hAT-Charlie	(78)	705	495	1530942
464	29.9	13.7	0.4	chr16	83404057	83404291	(6934054)	C	MER20B	DNA/hAT-Charlie	(467)	316	46	1530942
227	30.7	14.2	5.8	chr16	84619132	84619356	(5718989)	+	MIR	SINE/MIR	14	260	(2)	1533214
608	32.2	12.8	4.9	chr16	85003874	85004624	(5333721)	+	L2c	LINE/L2	2152	2970	(449)	1533993
181	25.8	7.0	4.3	chr16	85004654	85004722	(5333623)	+	L2c	LINE/L2	3317	3387	(0)	1533993
473	31.2	8.1	1.4	chr16	85303486	85303701	(5034644)	C	MIRb	SINE/MIR	(13)	255	21	1534591
1926	11.4	0.0	1.1	chr16	85350785	85351046	(4987299)	C	AluSx1	SINE/Alu	(20)	292	34	1534691
306	30.5	7.9	9.4	chr16	85351047	85351137	(4987208)	C	MIR	SINE/MIR	(118)	144	60	1534690
359	26.4	0.0	0.0	chr16	85351155	85351241	(4987104)	C	MLT1J1	LTR/ERVL-MaLR	(354)	90	4	1534692
1275	17.4	3.9	7.3	chr16	85351328	85351699	(4986646)	+	L1MB7	LINE/L1	5825	6183	(1)	1534693
513	26.9	1.4	4.0	chr16	85420997	85421147	(4917198)	+	MIR	SINE/MIR	111	257	(5)	1534801
1270	27.2	5.4	3.2	chr16	86387738	86388173	(3950172)	C	MLT1C	LTR/ERVL-MaLR	(16)	451	6	1536554
276	35.3	5.5	3.1	chr16	86397175	86397370	(3940975)	+	MIRb	SINE/MIR	5	205	(63)	1536578
417	30.5	2.6	11.2	chr16	86608996	86609209	(3729136)	C	MER117	DNA/hAT-Charlie	(2)	195	1	1536935
919	27.5	7.0	3.4	chr16	86609218	86609658	(3728687)	+	MER113	DNA/hAT-Charlie	1	458	(63)	1536936
1750	14.0	5.8	5.0	chr16	86709931	86710291	(3628054)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1537124
2284	19.8	4.5	2.5	chr16	86899796	86900319	(3438026)	+	L1MB5	LINE/L1	5628	6162	(12)	1537439
1823	16.9	11.4	5.0	chr16	86990387	86990785	(3347560)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1537607
40	2.5	0.0	0.0	chr16	87492912	87492952	(2845393)	+	(CGGCGA)n	Simple_repeat	1	41	(0)	1538508
254	30.9	4.1	4.3	chr16	88771233	88771366	(1566979)	C	MIRc	SINE/MIR	(93)	175	37	1540410
1892	15.0	2.6	1.3	chr16	88782112	88782411	(1555934)	C	AluJr	SINE/Alu	(8)	304	1	1540420
29	3.2	0.0	0.0	chr16	89565284	89565315	(773030)	+	(TGGGC)n	Simple_repeat	1	32	(0)	1541486
244	27.1	0.0	0.0	chr16	89922328	89922386	(415959)	+	UCON55	DNA/TcMar-Tigger	69	127	(65)	1542085
302	23.0	18.0	0.0	chr16	90022365	90022464	(315881)	C	L2a	LINE/L2	(2)	3424	3303	1542246
328	5.7	1.2	3.4	chr17	113094	113583	(83143858)	+	(ACCCTA)n	Simple_repeat	1	496	(0)	1544650
214	24.4	19.9	2.5	chr17	1488449	1488614	(81768827)	C	MIRb	SINE/MIR	(35)	233	39	1547238
2418	9.5	0.0	0.0	chr17	1576859	1577163	(81680278)	C	AluSx3	SINE/Alu	(6)	305	1	1547389
930	30.8	5.0	6.5	chr17	2892341	2892848	(80364593)	C	MLT1G	LTR/ERVL-MaLR	(51)	540	39	1550196
285	24.2	13.9	0.0	chr17	2892878	2893001	(80364440)	C	HAL1	LINE/L1	(1248)	1259	1116	1550192
2554	19.7	3.1	0.7	chr17	2954897	2955590	(80301851)	C	L1MB5	LINE/L1	(284)	5890	5182	1550323
2464	6.3	0.6	1.9	chr17	3602841	3603156	(79654285)	+	AluSp	SINE/Alu	2	313	(0)	1551351
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
615	24.8	2.9	0.0	chr17	4230022	4230154	(79027287)	C	MER119	DNA/hAT-Charlie	(391)	192	56	1552574
14	21.1	0.0	2.5	chr17	4366693	4366753	(78890688)	+	(CCCG)n	Simple_repeat	1	59	(0)	1552867
561	26.7	4.4	4.4	chr17	4565515	4565718	(78691723)	+	MLT1N2	LTR/ERVL-MaLR	359	562	(0)	1553318
1913	9.8	1.8	0.0	chr17	4730911	4731186	(78526255)	+	AluSx1	SINE/Alu	15	295	(17)	1553636
23	23.2	4.5	2.1	chr17	4807086	4807219	(78450222)	+	(GCCCCG)n	Simple_repeat	1	137	(0)	1553827
244	24.2	4.6	3.1	chr17	5419929	5419992	(77837449)	+	L2	LINE/L2	2380	2444	(975)	1555105
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
687	33.4	12.4	4.2	chr17	5515969	5516559	(77740882)	+	L3	LINE/CR1	3255	3900	(199)	1555293
692	26.3	11.0	0.0	chr17	5516561	5516754	(77740687)	C	MIRb	SINE/MIR	(1)	267	50	1555294
842	22.1	3.4	0.0	chr17	5526645	5526816	(77730625)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	1555315
1628	9.9	3.0	0.9	chr17	5527149	5527373	(77730068)	C	MER30	DNA/hAT-Charlie	(0)	230	1	1555316
224	20.8	0.0	2.0	chr17	5585278	5585326	(77672115)	+	MIRc	SINE/MIR	108	155	(113)	1555409
41	0.0	0.0	0.0	chr17	6223253	6223287	(77034154)	+	(AT)n	Simple_repeat	1	35	(0)	1556631
1484	20.6	1.5	0.3	chr17	6223288	6223609	(77033832)	+	L1MD2	LINE/L1	840	1166	(5243)	1556629
195	31.5	6.1	1.1	chr17	7015221	7015313	(76242128)	+	L2c	LINE/L2	3290	3387	(0)	1558090
12	4.3	8.3	0.0	chr17	7352010	7352033	(75905408)	+	(CCAGT)n	Simple_repeat	1	26	(0)	1558666
13	15.2	0.0	3.2	chr17	7352094	7352124	(75905317)	+	G-rich	Low_complexity	1	31	(0)	1558667
23	21.9	1.9	7.5	chr17	7404780	7404883	(75852558)	+	(GGCG)n	Simple_repeat	1	106	(0)	1558788
12	14.1	3.0	2.9	chr17	7440207	7440239	(75817202)	+	(GCCCCC)n	Simple_repeat	1	34	(0)	1558827
31	28.2	2.5	1.6	chr17	7561967	7562077	(75695364)	+	(GGC)n	Simple_repeat	1	145	(0)	1559082
13	20.8	0.0	0.0	chr17	7562078	7562110	(75695331)	+	(GCGGC)n	Simple_repeat	1	33	(0)	1559083
837	21.4	14.2	2.4	chr17	7750264	7750619	(75506822)	C	HAL1	LINE/L1	(544)	1963	1581	1559444
252	22.1	1.4	0.0	chr17	7750612	7750679	(75506762)	C	HAL1	LINE/L1	(1599)	908	840	1559444
13	22.5	2.0	3.9	chr17	7835734	7835783	(75421658)	+	(CACGCC)n	Simple_repeat	1	51	(0)	1559620
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
670	0.0	0.0	0.0	chr17	8186358	8186429	(75071012)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1560263
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
339	32.4	9.6	4.9	chr17	8384929	8385194	(74872247)	C	L2a	LINE/L2	(9)	3417	3108	1560703
2153	12.6	1.6	4.5	chr17	10291624	10291998	(72965443)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1564469
50	0.0	0.0	0.0	chr17	13306974	13307018	(69950423)	+	(ATT)n	Simple_repeat	1	45	(0)	1569559
334	15.7	0.0	0.0	chr17	15684352	15684402	(67573039)	+	AluYb8	SINE/Alu	258	308	(10)	1573497
2460	7.4	0.7	1.4	chr17	15684442	15684738	(67572703)	C	AluSx1	SINE/Alu	(17)	295	1	1573498
16	18.9	0.0	0.0	chr17	15999349	15999378	(67258063)	+	(T)n	Simple_repeat	1	30	(0)	1574053
278	32.0	15.2	0.0	chr17	16419459	16419608	(66837833)	+	MIR	SINE/MIR	12	188	(74)	1574953
5245	13.1	2.3	0.8	chr17	16905331	16906440	(66351001)	C	L1PA16	LINE/L1	(21)	6145	5021	1575742
2844	19.2	10.7	1.8	chr17	17958670	17959343	(65298098)	+	MER21B	LTR/ERVL	1	741	(127)	1577660
12	11.4	10.9	5.6	chr17	18781074	18781137	(64476304)	+	(CTCCGC)n	Simple_repeat	1	71	(0)	1579119
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
1631	12.8	2.2	2.5	chr17	19111856	19112129	(64145312)	+	AluSx	SINE/Alu	1	273	(39)	1579880
2039	0.0	0.0	0.0	chr17	19188016	19188232	(64069209)	+	U3	snRNA	1	217	(0)	1580091
1468	16.5	10.7	7.0	chr17	19448609	19448768	(63808673)	C	MSTB1	LTR/ERVL-MaLR	(232)	200	21	1580616
2450	17.9	0.2	4.0	chr17	19448805	19449253	(63808188)	+	LTR47B4	LTR/ERVL	1	432	(2)	1580618
17	22.4	6.6	2.5	chr17	21042840	21042924	(62214517)	+	(CGG)n	Simple_repeat	1	88	(0)	1583516
20	25.6	3.7	0.9	chr17	28041410	28041481	(55215960)	+	A-rich	Low_complexity	1	74	(0)	1587976
1067	5.5	0.0	0.0	chr17	28719633	28719760	(54537681)	+	AluYh3	SINE/Alu	142	269	(42)	1589196
30	0.0	3.1	0.0	chr17	28719764	28719795	(54537646)	+	(AAAACAA)n	Simple_repeat	1	33	(0)	1589197
29	0.0	0.0	0.0	chr17	30291955	30291981	(52965460)	+	(CGG)n	Simple_repeat	1	27	(0)	1592285
18	22.9	6.1	0.0	chr17	30709071	30709136	(52548305)	+	(GCCCC)n	Simple_repeat	1	70	(0)	1593097
518	26.6	10.8	9.2	chr17	31268102	31268346	(51989095)	C	MLT1M	LTR/ERVL-MaLR	(317)	355	104	1594272
2373	9.1	0.7	0.0	chr17	31268347	31268642	(51988799)	+	AluSc8	SINE/Alu	1	298	(13)	1594273
1979	26.8	5.6	3.0	chr17	31269499	31270056	(51987385)	C	MLT1K	LTR/ERVL-MaLR	(22)	573	1	1594276
247	35.8	3.9	0.0	chr17	31674358	31674480	(51582961)	C	MIRc	SINE/MIR	(116)	152	25	1595057
184	30.2	9.9	5.5	chr17	31674529	31674710	(51582731)	+	L3b	LINE/CR1	4661	4851	(381)	1595058
467	21.6	4.1	2.2	chr17	31741094	31741208	(51516233)	C	MIRc	SINE/MIR	(141)	127	6	1595210
16	23.0	0.0	7.7	chr17	32444481	32444545	(50812896)	+	(CGG)n	Simple_repeat	1	65	(0)	1596845
469	33.4	6.3	3.9	chr17	33560323	33560630	(49696811)	+	L3	LINE/CR1	1750	2065	(2034)	1598903
263	36.7	1.4	0.7	chr17	35257313	35257452	(47999989)	+	MamRep605	LTR?	670	810	(39)	1602004
29	14.9	0.0	7.7	chr17	36545398	36545475	(46711966)	+	(GGCG)n	Simple_repeat	1	78	(0)	1604134
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
239	20.7	1.7	0.0	chr17	37609732	37609789	(45647652)	+	L1ME3E	LINE/L1	6115	6173	(69)	1606177
13	13.2	0.0	0.0	chr17	38702362	38702386	(44555055)	+	(CGG)n	Simple_repeat	1	25	(0)	1608405
13	10.4	6.5	0.0	chr17	38702408	38702438	(44555003)	+	G-rich	Low_complexity	1	33	(0)	1608406
19	21.9	4.2	2.7	chr17	38702481	38702552	(44554889)	+	G-rich	Low_complexity	1	75	(0)	1608406
416	30.3	8.4	0.7	chr17	38702582	38702734	(44554707)	C	MIRb	SINE/MIR	(19)	249	84	1608407
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
423	30.2	4.8	1.6	chr17	41930142	41930323	(41327118)	C	MIRc	SINE/MIR	(58)	210	20	1614595
2343	8.7	1.3	1.3	chr17	42346907	42347218	(40910223)	+	AluSx1	SINE/Alu	1	312	(0)	1615416
2718	12.1	3.7	0.2	chr17	42347572	42347984	(40909457)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1615417
21	23.8	3.9	4.7	chr17	42423106	42423207	(40834234)	+	(GGAGCG)n	Simple_repeat	1	106	(0)	1615601
1872	14.9	0.0	4.3	chr17	42428027	42428348	(40829093)	C	AluJb	SINE/Alu	(4)	308	1	1615616
184	34.1	5.0	7.0	chr17	42518362	42518503	(40738938)	+	MamRTE1	LINE/RTE-BovB	3274	3412	(400)	1615808
13	33.2	0.0	1.8	chr17	42676646	42676701	(40580740)	+	GA-rich	Low_complexity	1	56	(0)	1616131
27	14.6	1.9	0.0	chr17	42678337	42678389	(40579052)	+	G-rich	Low_complexity	1	54	(0)	1616134
283	33.1	7.1	4.6	chr17	42678626	42678885	(40578556)	C	Plat_L3	LINE/CR1	(118)	3468	3202	1616135
1558	16.3	6.8	3.6	chr17	42772745	42773045	(40484396)	+	AluJb	SINE/Alu	2	312	(0)	1616343
187	33.1	6.1	6.7	chr17	42773138	42773257	(40484184)	+	MIR1_Amn	SINE/MIR	6	118	(90)	1616344
472	32.9	2.9	2.5	chr17	42783467	42783703	(40473738)	+	L2c	LINE/L2	2972	3209	(178)	1616355
721	32.5	9.3	3.3	chr17	42814831	42815625	(40441816)	+	L2b	LINE/L2	2528	3374	(1)	1616405
19	28.9	5.4	0.0	chr17	42833431	42833522	(40423919)	+	(GCGA)n	Simple_repeat	1	97	(0)	1616449
3112	10.4	0.0	0.4	chr17	43272124	43272607	(39984834)	+	L1PA8	LINE/L1	5668	6149	(23)	1617462
318	20.1	9.1	1.5	chr17	43272629	43272830	(39984611)	+	HERVIP10FH-int	LTR/ERV1	820	1038	(4064)	1617463
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
2142	13.8	1.0	1.0	chr17	44917258	44917569	(38339872)	C	AluJb	SINE/Alu	(0)	312	1	1620983
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
34	16.7	3.0	0.0	chr17	45293794	45293872	(37963569)	+	(CA)n	Simple_repeat	1	81	(0)	1621735
326	19.8	21.9	3.2	chr17	45294409	45294533	(37962908)	+	Charlie4z	DNA/hAT-Charlie	2	156	(11)	1621736
246	29.8	3.1	2.1	chr17	45294678	45294773	(37962668)	C	MER5A	DNA/hAT-Charlie	(73)	116	20	1621737
671	16.1	21.8	0.0	chr17	45294807	45294967	(37962474)	C	MER3	DNA/hAT-Charlie	(3)	206	1	1621738
214	26.0	7.7	3.0	chr17	46764796	46764894	(36492547)	+	MIRb	SINE/MIR	2	105	(163)	1624672
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
229	28.6	1.4	0.0	chr17	47305771	47305840	(35951601)	C	MER102a	DNA/hAT-Charlie	(3)	327	262	1625764
16	17.9	4.5	0.0	chr17	47622119	47622162	(35635279)	+	A-rich	Low_complexity	1	46	(0)	1626412
275	34.1	16.4	6.1	chr17	47831014	47831409	(35426032)	C	L2b	LINE/L2	(0)	3375	2931	1626803
13	13.1	0.0	0.0	chr17	47896243	47896267	(35361174)	+	(CGG)n	Simple_repeat	1	25	(0)	1626911
16	14.2	0.0	0.0	chr17	48972489	48972519	(34284922)	+	(CACCCC)n	Simple_repeat	1	31	(0)	1628950
1359	21.7	8.9	3.5	chr17	49146888	49147260	(34110181)	+	LTR80A	LTR/ERVL	185	579	(4)	1629305
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
1986	11.6	0.0	7.1	chr17	49647008	49647343	(33610098)	+	AluSx	SINE/Alu	1	312	(0)	1630309
554	24.7	10.3	4.2	chr17	49708479	49708668	(33548773)	+	MIRc	SINE/MIR	61	263	(5)	1630437
448	30.1	11.6	0.9	chr17	49958850	49959064	(33298377)	+	MIRc	SINE/MIR	15	255	(13)	1630891
326	21.6	6.4	1.0	chr17	50027783	50027885	(33229556)	+	L2a	LINE/L2	3298	3406	(20)	1631022
3300	24.6	7.9	1.2	chr17	50033122	50033998	(33223443)	+	L1ME3A	LINE/L1	5202	6165	(8)	1631027
14	15.0	2.4	4.8	chr17	50051304	50051344	(33206097)	+	G-rich	Low_complexity	1	42	(0)	1631073
400	30.9	9.5	1.2	chr17	50062138	50062363	(33195078)	C	MIRc	SINE/MIR	(0)	268	13	1631089
23	12.8	0.0	2.2	chr17	50062658	50062702	(33194739)	+	(GCCCT)n	Simple_repeat	1	45	(0)	1631090
420	29.8	12.8	2.9	chr17	50093402	50093646	(33163795)	C	L2b	LINE/L2	(200)	3187	2915	1631148
2281	13.0	0.0	0.0	chr17	50093695	50094002	(33163439)	+	AluSz	SINE/Alu	1	308	(4)	1631149
22	15.1	6.6	1.5	chr17	50183192	50183252	(33074189)	+	GA-rich	Low_complexity	1	65	(0)	1631294
19	17.8	0.0	2.7	chr17	50183243	50183290	(33074151)	+	A-rich	Low_complexity	1	46	(0)	1631295
316	31.1	9.6	1.2	chr17	50218703	50218865	(33038576)	C	Charlie25	DNA/hAT-Charlie	(749)	1775	1598	1631334
1708	18.2	0.7	4.7	chr17	50218903	50219220	(33038221)	+	AluJb	SINE/Alu	2	306	(6)	1631335
2214	26.8	6.5	3.0	chr17	50219235	50220070	(33037371)	+	Charlie25	DNA/hAT-Charlie	1657	2523	(1)	1631336
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
349	24.6	0.0	0.0	chr17	50638792	50638860	(32618581)	+	MIR3	SINE/MIR	56	124	(84)	1632153
307	34.4	4.9	9.7	chr17	50661650	50661887	(32595554)	C	L2b	LINE/L2	(0)	3375	3150	1632203
212	31.7	5.7	5.2	chr17	50662199	50662408	(32595033)	C	L2b	LINE/L2	(818)	2601	2391	1632203
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
17	18.8	0.0	10.7	chr17	51120903	51120977	(32136464)	+	G-rich	Low_complexity	1	75	(0)	1633162
489	25.6	12.2	3.4	chr17	51121167	51121344	(32136097)	C	MIRc	SINE/MIR	(18)	250	55	1633163
21	8.7	2.7	0.0	chr17	51275707	51275744	(31981697)	+	(TTTTTTG)n	Simple_repeat	1	39	(0)	1633488
261	25.0	8.4	1.3	chr17	53626385	53626461	(29630980)	+	MER103C	DNA/hAT-Charlie	89	171	(126)	1637004
284	30.2	11.4	0.0	chr17	53627509	53627624	(29629817)	+	Tigger10	DNA/TcMar-Tigger	1527	1657	(187)	1637007
776	18.8	13.8	0.4	chr17	53627749	53628025	(29629416)	C	L1M4	LINE/L1	(4977)	2540	2221	1637008
298	21.8	6.0	0.0	chr17	55162455	55162532	(28094909)	C	L2a	LINE/L2	(0)	3426	3344	1639146
72	8.7	0.9	1.7	chr17	55734130	55734243	(27523198)	+	(TC)n	Simple_repeat	1	115	(0)	1640144
186	17.1	0.0	2.8	chr17	55734304	55734339	(27523102)	C	MIRb	SINE/MIR	(38)	230	196	1640145
334	36.8	0.0	0.0	chr17	55734564	55734677	(27522764)	C	MIR3	SINE/MIR	(1)	207	94	1640146
556	22.9	14.2	1.9	chr17	56186304	56186532	(27070909)	C	MIRc	SINE/MIR	(0)	268	10	1640886
345	36.5	2.8	2.8	chr17	56681653	56681942	(26575499)	C	CR1-3_Croc	LINE/CR1	(1518)	2087	1798	1641740
682	33.2	2.0	2.6	chr17	56681948	56682250	(26575191)	C	L3	LINE/CR1	(1291)	2808	2508	1641736
192	31.5	5.2	3.0	chr17	56699549	56699679	(26557762)	C	Penelope1_Vert	LINE/Penelope	(547)	540	407	1641778
415	32.2	5.7	7.4	chr17	56756543	56756761	(26500680)	+	L2c	LINE/L2	3076	3302	(73)	1641908
190	26.4	1.9	3.6	chr17	56756912	56756966	(26500475)	C	L2c	LINE/L2	(1)	3386	3333	1641911
4147	14.8	5.2	1.1	chr17	56786619	56787314	(26470127)	C	MER44C	DNA/TcMar-Tigger	(7)	726	1	1641977
13	11.4	0.0	6.2	chr17	56914103	56914134	(26343307)	+	(GCGG)n	Simple_repeat	1	32	(0)	1642230
300	28.2	17.0	0.0	chr17	56915727	56915843	(26341598)	C	MIRb	SINE/MIR	(123)	145	5	1642234
192	26.2	2.3	0.0	chr17	56916023	56916064	(26341377)	C	L2b	LINE/L2	(5)	3370	3328	1642238
260	21.9	6.4	1.4	chr17	56916199	56916272	(26341169)	+	MIR	SINE/MIR	125	202	(60)	1642239
1956	11.9	0.0	3.2	chr17	56916274	56916558	(26340883)	+	AluSx1	SINE/Alu	2	277	(35)	1642240
14	31.4	2.1	4.2	chr17	57085116	57085208	(26172233)	+	G-rich	Low_complexity	1	95	(0)	1642628
308	23.6	11.7	0.9	chr17	57372448	57372554	(25884887)	C	L1ME4a	LINE/L1	(36)	6088	5969	1643166
216	27.3	7.6	11.0	chr17	57420860	57420995	(25836446)	C	L3b	LINE/CR1	(503)	4729	4599	1643242
12	12.5	0.0	3.6	chr17	57868708	57868735	(25388706)	+	GA-rich	Low_complexity	1	28	(0)	1644007
12	24.8	0.0	2.5	chr17	57875676	57875715	(25381726)	+	GA-rich	Low_complexity	1	40	(0)	1644018
527	27.4	3.1	4.8	chr17	57879138	57879302	(25378139)	+	MER117	DNA/hAT-Charlie	35	196	(1)	1644026
301	33.6	4.0	2.5	chr17	57879305	57879426	(25378015)	+	L2b	LINE/L2	3240	3363	(12)	1644027
363	22.9	9.1	6.0	chr17	57890820	57890968	(25366473)	+	MIR	SINE/MIR	9	162	(100)	1644052
503	29.1	3.3	1.1	chr17	57892848	57893024	(25364417)	C	MER117	DNA/hAT-Charlie	(10)	187	7	1644055
600	31.0	7.9	2.7	chr17	57948588	57948885	(25308556)	C	L3b	LINE/CR1	(14)	5218	4904	1644180
196	28.9	5.2	1.0	chr17	57971082	57971182	(25286259)	+	L2c	LINE/L2	3293	3418	(8)	1644218
13	23.4	0.0	2.4	chr17	57987261	57987302	(25270139)	+	(CCCGG)n	Simple_repeat	1	42	(0)	1644233
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
2565	6.7	0.0	0.0	chr17	58786016	58786313	(24471128)	C	AluY	SINE/Alu	(13)	298	1	1645772
4129	16.0	1.1	3.9	chr17	58786314	58786724	(24470717)	C	MER44C	DNA/TcMar-Tigger	(338)	395	1	1645771
13	19.1	0.0	0.0	chr17	59106906	59106935	(24150506)	+	G-rich	Low_complexity	1	30	(0)	1646445
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
192	25.6	12.4	3.7	chr17	59358045	59358125	(23899316)	C	MIR3	SINE/MIR	(39)	169	81	1647069
300	29.0	11.5	0.7	chr17	59361453	59361591	(23895850)	+	L2b	LINE/L2	3218	3373	(2)	1647076
443	25.4	6.8	0.9	chr17	59361618	59361771	(23895670)	+	Charlie4z	DNA/hAT-Charlie	1	129	(38)	1647077
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
12	5.0	0.0	4.3	chr17	59756637	59756659	(23500782)	+	(TGTC)n	Simple_repeat	1	23	(0)	1647880
2323	7.9	2.4	0.3	chr17	59782921	59783212	(23474229)	+	AluY	SINE/Alu	1	298	(13)	1647934
18	17.9	0.0	0.0	chr17	59841167	59841198	(23416243)	+	(T)n	Simple_repeat	1	32	(0)	1648067
517	18.1	0.0	1.2	chr17	59843641	59843723	(23413718)	+	AluJr	SINE/Alu	1	82	(230)	1648070
2192	8.6	3.6	0.3	chr17	59843731	59844022	(23413419)	+	AluSp	SINE/Alu	1	302	(11)	1648071
27	0.0	0.0	0.0	chr17	59844074	59844099	(23413342)	+	(T)n	Simple_repeat	1	26	(0)	1648072
1433	21.1	3.3	0.0	chr17	59844108	59844372	(23413069)	C	AluJb	SINE/Alu	(37)	275	2	1648073
2275	11.1	1.6	0.0	chr17	59844392	59844697	(23412744)	+	AluSz	SINE/Alu	1	311	(1)	1648074
3319	16.5	9.1	7.2	chr17	60469418	60470258	(22787183)	C	L1MB4	LINE/L1	(0)	6180	5323	1649321
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
3285	9.2	9.1	1.0	chr17	60573551	60574052	(22683389)	+	LTR35A	LTR/ERV1	1	547	(0)	1649562
789	14.2	0.7	3.6	chr17	60574053	60574166	(22683275)	+	L1MC4a	LINE/L1	7604	7718	(164)	1649561
16	14.7	3.3	0.0	chr17	61201298	61201327	(22056114)	+	(GT)n	Simple_repeat	1	31	(0)	1650662
356	28.4	9.0	4.1	chr17	61250702	61250870	(22006571)	+	MIR3	SINE/MIR	24	201	(7)	1650744
2565	8.2	0.3	0.3	chr17	61251288	61251593	(22005848)	+	AluSq2	SINE/Alu	1	306	(7)	1650745
225	26.6	5.9	3.0	chr17	61252652	61252717	(22004724)	C	L3b	LINE/CR1	(10)	5222	5155	1650746
371	30.1	1.0	0.0	chr17	61337844	61337946	(21919495)	C	MIRb	SINE/MIR	(79)	189	86	1650905
272	35.8	5.8	4.0	chr17	61337916	61338116	(21919325)	+	L2b	LINE/L2	3169	3373	(2)	1650906
14	8.4	0.0	3.7	chr17	61409842	61409868	(21847573)	+	(TGGG)n	Simple_repeat	1	27	(0)	1651015
15	40.2	0.0	0.0	chr17	62478685	62478768	(20778673)	+	(CCC)n	Simple_repeat	1	84	(0)	1653080
21	22.0	4.2	2.7	chr17	62718822	62718892	(20538549)	+	(CTTCT)n	Simple_repeat	1	74	(0)	1653571
627	25.9	5.8	10.0	chr17	62787600	62787748	(20469693)	+	MIR	SINE/MIR	5	145	(117)	1653688
30	0.0	0.0	0.0	chr17	62787749	62787776	(20469665)	+	(GATA)n	Simple_repeat	1	28	(0)	1653689
627	25.9	5.8	10.0	chr17	62787777	62787896	(20469545)	+	MIR	SINE/MIR	146	262	(0)	1653688
327	29.5	0.0	0.0	chr17	62824788	62824865	(20432576)	C	MER5B	DNA/hAT-Charlie	(77)	101	24	1653759
246	32.0	7.2	0.0	chr17	62824891	62824993	(20432448)	C	MIR3	SINE/MIR	(56)	152	42	1653760
6801	13.5	3.3	1.7	chr17	63034053	63035453	(20221988)	+	Tigger1	DNA/TcMar-Tigger	843	2418	(0)	1654150
3103	20.1	7.6	1.5	chr17	63035471	63036867	(20220574)	C	L1ME1	LINE/L1	(290)	5889	4393	1654149
4354	17.0	4.2	3.5	chr17	63188764	63190062	(20067379)	C	L1MB7	LINE/L1	(7)	6177	4857	1654397
30	3.4	0.0	0.0	chr17	63358348	63358377	(19899064)	+	(AG)n	Simple_repeat	1	30	(0)	1654619
47	2.3	0.0	0.0	chr17	63358380	63358424	(19899017)	+	(TG)n	Simple_repeat	1	45	(0)	1654620
1620	6.7	8.4	2.2	chr17	63433051	63433273	(19824168)	C	AluY	SINE/Alu	(10)	301	64	1654707
3681	8.7	2.7	3.6	chr17	63460261	63460786	(19796655)	+	MER41C	LTR/ERV1	1	521	(0)	1654739
641	35.1	11.2	5.5	chr17	63461121	63461220	(19796221)	+	L3	LINE/CR1	3106	3199	(900)	1654740
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
40	6.7	0.0	0.0	chr17	63985214	63985261	(19272180)	+	(AC)n	Simple_repeat	1	48	(0)	1655700
756	21.0	0.0	0.0	chr17	63985374	63985497	(19271944)	C	FLAM_A	SINE/Alu	(18)	124	1	1655701
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
185	26.6	10.2	0.0	chr17	64240780	64240858	(19016583)	+	MIRc	SINE/MIR	176	263	(5)	1656138
227	23.8	17.5	1.2	chr17	64385062	64385142	(18872299)	+	Charlie4z	DNA/hAT-Charlie	71	167	(0)	1656471
308	21.5	1.5	0.0	chr17	64497593	64497657	(18759784)	+	MER5A	DNA/hAT-Charlie	1	66	(123)	1656726
4636	13.8	5.7	3.3	chr17	64635352	64636148	(18621293)	C	L1MB7	LINE/L1	(32)	6152	5329	1656951
2066	12.9	8.7	0.8	chr17	64682817	64683167	(18574274)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1657077
611	24.5	10.8	7.5	chr17	64683168	64683283	(18574158)	+	L1ME4a	LINE/L1	5688	5797	(327)	1657076
18	7.0	3.3	0.0	chr17	64919170	64919199	(18338242)	+	(GGC)n	Simple_repeat	1	31	(0)	1657592
13	29.4	1.2	6.0	chr17	64919291	64919373	(18338068)	+	G-rich	Low_complexity	1	84	(0)	1657593
23	28.5	5.8	2.1	chr17	65750959	65751095	(17506346)	+	A-rich	Low_complexity	1	145	(0)	1659223
12	23.5	4.2	2.0	chr17	65751028	65751075	(17506366)	+	G-rich	Low_complexity	1	50	(0)	1659224
3869	16.3	3.0	2.4	chr17	65784788	65785542	(17471899)	C	L1MB7	LINE/L1	(0)	6184	5425	1659275
1339	17.1	2.7	11.9	chr17	65785545	65785915	(17471526)	C	L1MB7	LINE/L1	(908)	5238	4903	1659275
1020	28.3	8.9	2.1	chr17	65857561	65858030	(17399411)	C	L1M5	LINE/L1	(2277)	3869	3365	1659364
892	26.6	10.4	1.8	chr17	65858047	65858598	(17398843)	C	L1M5	LINE/L1	(2322)	3824	3220	1659365
26	9.1	0.0	0.0	chr17	66273163	66273208	(16984233)	+	(T)n	Simple_repeat	1	46	(0)	1659997
254	27.4	1.6	0.0	chr17	66275603	66275664	(16981777)	C	MIR3	SINE/MIR	(61)	147	85	1660005
16	18.9	0.0	0.0	chr17	66459817	66459846	(16797595)	+	(T)n	Simple_repeat	1	30	(0)	1660304
236	13.3	2.2	0.0	chr17	66467387	66467431	(16790010)	+	MIR3	SINE/MIR	118	163	(45)	1660310
240	27.9	1.1	7.5	chr17	66548459	66548551	(16708890)	C	MIRb	SINE/MIR	(21)	247	161	1660435
279	25.4	0.0	0.0	chr17	66567947	66568017	(16689424)	+	L1M5	LINE/L1	5084	5154	(992)	1660470
2126	10.3	4.0	1.0	chr17	67339108	67339398	(15918043)	C	AluSx	SINE/Alu	(12)	300	1	1661829
368	22.7	13.4	0.0	chr17	67422283	67422392	(15835049)	+	MIRb	SINE/MIR	13	139	(129)	1662013
1773	16.0	1.7	4.6	chr17	67608492	67608798	(15648643)	C	AluJo	SINE/Alu	(14)	298	1	1662377
779	23.0	3.1	6.8	chr17	67608799	67608961	(15648480)	C	L1MC4	LINE/L1	(450)	7592	7436	1662373
16	0.0	0.0	0.0	chr17	67609011	67609030	(15648411)	+	(TTTA)n	Simple_repeat	1	20	(0)	1662378
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
2219	31.4	7.5	5.8	chr17	68821510	68823230	(14434211)	+	ERV3-16A3_I-int	LTR/ERVL	236	1988	(3238)	1664850
16	2.9	10.8	2.4	chr17	69608920	69608956	(13648485)	+	(AGATATG)n	Simple_repeat	1	41	(0)	1666062
12	21.8	1.9	5.6	chr17	69673229	69673281	(13584160)	+	A-rich	Low_complexity	1	54	(0)	1666165
3123	24.3	4.1	0.9	chr17	69873894	69874642	(13382799)	+	L1MB7	LINE/L1	1	774	(6743)	1666454
11982	19.6	6.2	1.5	chr17	69874666	69877167	(13380274)	+	L1MB7	LINE/L1	2816	5468	(1176)	1666454
235	31.1	5.4	3.9	chr17	70293601	70293727	(12963714)	C	MIR	SINE/MIR	(17)	245	117	1667088
5193	9.2	0.9	2.9	chr17	70293730	70294488	(12962953)	+	L1PA10	LINE/L1	5415	6158	(10)	1667089
215	31.1	8.1	0.8	chr17	71071946	71072066	(12185375)	C	MIR3	SINE/MIR	(80)	128	2	1668224
1209	33.4	8.7	3.5	chr17	71411985	71412824	(11844617)	+	HAL1	LINE/L1	18	905	(1602)	1668755
547	24.7	10.1	6.2	chr17	71413187	71413315	(11844126)	+	L1ME3D	LINE/L1	5938	6058	(184)	1668756
355	24.4	0.0	5.3	chr17	71424358	71424452	(11832989)	+	Eulor6B	DNA?	69	158	(180)	1668778
31	0.0	0.0	0.0	chr17	71502776	71502802	(11754639)	+	(TG)n	Simple_repeat	1	27	(0)	1668903
4607	13.6	5.5	1.8	chr17	71522424	71523261	(11734180)	+	L1PA16	LINE/L1	5292	6162	(4)	1668937
235	18.4	3.9	0.0	chr17	72126688	72126736	(11130705)	+	X6B_LINE	LINE/CR1	1015	1065	(7)	1669844
2288	25.8	9.0	1.0	chr17	72134234	72134937	(11122504)	C	L1ME2z	LINE/L1	(264)	6180	5415	1669860
12	5.5	0.0	0.0	chr17	72339090	72339108	(10918333)	+	(TGC)n	Simple_repeat	1	19	(0)	1670215
386	26.1	14.5	3.8	chr17	72339652	72339810	(10917631)	C	MIR	SINE/MIR	(2)	260	82	1670216
274	29.0	10.8	0.9	chr17	72374627	72374734	(10882707)	C	MIRb	SINE/MIR	(116)	152	33	1670281
2212	10.4	9.4	0.9	chr17	72390913	72391260	(10866181)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1670311
378	33.0	1.4	8.5	chr17	72391395	72391614	(10865827)	C	MIR	SINE/MIR	(30)	232	33	1670312
796	18.2	10.1	0.6	chr17	72984519	72984689	(10272752)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1671369
3765	16.6	8.2	0.9	chr17	72997555	72998222	(10259219)	+	MER44C	DNA/TcMar-Tigger	2	722	(11)	1671400
814	25.7	8.9	0.7	chr17	73043759	73044036	(10213405)	C	Charlie13b	DNA/hAT-Charlie	(8)	504	202	1671504
350	26.8	10.9	5.3	chr17	73231497	73231685	(10025756)	C	L3b	LINE/CR1	(91)	5141	4941	1671900
2571	7.0	0.0	0.3	chr17	73307436	73307747	(9949694)	C	AluY	SINE/Alu	(0)	311	1	1672046
18	14.9	0.0	7.7	chr17	74203455	74203506	(9053935)	+	GA-rich	Low_complexity	1	52	(0)	1673684
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
2245	9.3	1.0	2.3	chr17	75268716	75269025	(7988416)	+	AluSq2	SINE/Alu	1	306	(7)	1675723
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
2309	9.0	0.0	0.0	chr17	75775945	75776234	(7481207)	+	AluSc	SINE/Alu	2	291	(18)	1676749
1586	21.9	11.9	3.7	chr17	76048344	76048804	(7208637)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	1677284
13	7.2	6.5	3.0	chr17	76080453	76080483	(7176958)	+	GA-rich	Low_complexity	1	33	(0)	1677349
14	8.6	10.8	0.0	chr17	76080498	76080540	(7176901)	+	(GGTGCAG)n	Simple_repeat	1	47	(0)	1677350
521	24.1	12.0	0.0	chr17	76264573	76264734	(6992707)	+	L1ME3A	LINE/L1	5982	6165	(8)	1677697
304	29.3	2.4	13.4	chr17	76635725	76635866	(6621575)	C	L2c	LINE/L2	(5)	3382	3257	1678427
367	31.5	5.6	6.1	chr17	76636025	76636220	(6621221)	C	L1ME4a	LINE/L1	(1)	6123	5929	1678428
202	29.4	8.6	1.2	chr17	76671539	76671624	(6585817)	+	L2c	LINE/L2	3294	3386	(1)	1678523
249	5.9	0.0	0.0	chr17	76671636	76671669	(6585772)	+	Alu	SINE/Alu	1	34	(99)	1678524
1884	21.6	9.0	0.2	chr17	76772817	76773304	(6484137)	C	L1MEc	LINE/L1	(5635)	765	231	1678713
1328	15.9	6.9	3.4	chr17	76773309	76773601	(6483840)	C	L1MD	LINE/L1	(651)	5591	5288	1678714
2366	8.0	0.3	0.0	chr17	76773617	76773904	(6483537)	C	AluSc	SINE/Alu	(19)	290	2	1678715
456	30.0	9.3	4.2	chr17	76867128	76867391	(6390050)	+	MamTip2	DNA/hAT-Tip100	21	299	(6)	1678931
714	17.7	4.9	0.6	chr17	76872371	76872546	(6384895)	C	MER5A	DNA/hAT-Charlie	(0)	189	6	1678937
509	27.9	8.3	3.9	chr17	77088239	77088469	(6168972)	+	MIRb	SINE/MIR	14	255	(13)	1679420
409	24.6	5.2	0.0	chr17	77142048	77142157	(6115284)	C	MIR3	SINE/MIR	(11)	197	82	1679539
1871	14.1	5.7	0.0	chr17	77142295	77142578	(6114863)	+	AluJb	SINE/Alu	3	303	(9)	1679540
299	31.2	6.1	10.7	chr17	77233707	77233997	(6023444)	+	MLT1J2	LTR/ERVL-MaLR	135	448	(0)	1679691
238	23.8	0.0	16.5	chr17	77234120	77234240	(6023201)	C	L2a	LINE/L2	(469)	2950	2850	1679690
2430	8.4	0.0	0.0	chr17	77315289	77315585	(5941856)	C	AluSg	SINE/Alu	(13)	297	1	1679867
186	24.4	0.0	0.0	chr17	77842798	77842838	(5414603)	+	MIR	SINE/MIR	220	260	(2)	1680738
477	31.6	1.2	4.0	chr17	77843031	77843128	(5414313)	C	MIR	SINE/MIR	(0)	262	165	1680739
579	22.3	0.9	0.0	chr17	77843129	77843240	(5414201)	C	MER81	DNA/hAT-Blackjack	(0)	114	2	1680740
19	20.8	1.5	5.8	chr17	78168588	78168655	(5088786)	+	(GCG)n	Simple_repeat	1	69	(0)	1681320
53	0.0	0.0	0.0	chr17	78254749	78254793	(5002648)	+	(GT)n	Simple_repeat	1	45	(0)	1681498
2141	8.3	0.0	3.5	chr17	78254794	78255082	(5002359)	C	AluSx	SINE/Alu	(33)	279	1	1681499
249	26.1	3.0	0.0	chr17	78315419	78315483	(4941958)	C	L2a	LINE/L2	(3)	3423	3357	1681636
17	7.3	3.5	0.0	chr17	78315835	78315863	(4941578)	+	(CCT)n	Simple_repeat	1	30	(0)	1681637
579	20.4	2.6	0.3	chr17	78330603	78330730	(4926711)	C	MIRc	SINE/MIR	(47)	161	34	1681665
348	24.5	5.5	1.8	chr17	78342616	78342732	(4914709)	+	MIRb	SINE/MIR	107	236	(32)	1681693
370	32.2	10.8	0.0	chr17	78343551	78343665	(4913776)	C	MIR	SINE/MIR	(8)	254	126	1681694
282	26.5	3.5	0.0	chr17	78681339	78681421	(4576020)	+	L2c	LINE/L2	3072	3157	(230)	1682270
309	30.9	13.1	5.7	chr17	78935726	78936113	(4321328)	C	L2c	LINE/L2	(0)	3387	2955	1682713
15	24.3	0.0	3.9	chr17	78936280	78936331	(4321110)	+	G-rich	Low_complexity	1	52	(0)	1682714
16	14.9	0.0	0.0	chr17	80147172	80147202	(3110239)	+	(ACGT)n	Simple_repeat	1	31	(0)	1684529
234	30.2	8.5	4.2	chr17	80856668	80856881	(2400560)	+	Tigger15a	DNA/TcMar-Tigger	488	711	(4)	1685612
31	20.1	0.0	0.0	chr17	80991986	80992053	(2265388)	+	G-rich	Low_complexity	1	68	(0)	1685754
20	7.9	0.0	0.0	chr17	81395099	81395125	(1862316)	+	(TG)n	Simple_repeat	1	27	(0)	1686226
885	15.9	7.2	1.2	chr17	81507712	81507965	(1749476)	C	L1M4	LINE/L1	(684)	5496	5232	1686347
1112	16.1	1.4	7.1	chr17	81507980	81508165	(1749276)	C	AluJr	SINE/Alu	(13)	299	126	1686348
2279	10.6	0.0	0.7	chr17	81508166	81508467	(1748974)	+	AluY	SINE/Alu	1	300	(11)	1686349
2161	10.9	0.7	0.7	chr17	81508470	81508763	(1748678)	+	AluSp	SINE/Alu	1	294	(19)	1686350
359	31.8	4.9	0.0	chr17	81508816	81508991	(1748450)	C	L1M5	LINE/L1	(622)	5572	5388	1686351
329	31.4	19.8	4.7	chr17	81576537	81576733	(1680708)	+	L1M2	LINE/L1	5096	5319	(824)	1686418
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
540	3.0	2.1	1.6	chr18	10001	10631	(80362654)	+	(CCCTAA)n	Simple_repeat	1	644	(0)	1689081
712	33.0	8.6	2.7	chr18	2515340	2515788	(77857497)	C	L2	LINE/L2	(531)	2888	2411	1692796
289	33.6	4.7	8.3	chr18	3321606	3321761	(77051524)	+	MIRc	SINE/MIR	1	150	(118)	1694151
14	12.6	0.0	7.5	chr18	3448257	3448296	(76924989)	+	(CCTCCTC)n	Simple_repeat	1	40	(0)	1694436
1357	25.6	6.4	10.0	chr18	8890951	8891661	(71481624)	+	MER77B	LTR/ERVL	1	707	(224)	1702060
4702	17.8	1.5	3.1	chr18	8946012	8946939	(71426346)	+	L1MB7	LINE/L1	5256	6168	(16)	1702143
354	30.3	5.0	1.9	chr18	8948665	8948819	(71424466)	C	LTR67B	LTR/ERVL	(460)	160	1	1702148
291	35.8	1.0	0.0	chr18	9828289	9828383	(70544902)	C	MER117	DNA/hAT-Charlie	(60)	137	42	1703717
329	23.3	3.4	6.5	chr18	10010945	10011036	(70362249)	C	MIRc	SINE/MIR	(19)	249	161	1703983
1805	19.0	0.3	0.3	chr18	13435441	13435745	(66937540)	C	AluJo	SINE/Alu	(6)	306	2	1709089
335	24.1	0.0	6.6	chr18	13435983	13436093	(66937192)	+	MIRc	SINE/MIR	140	234	(34)	1709090
214	32.5	0.0	9.1	chr18	13436049	13436136	(66937149)	C	L2a	LINE/L2	(0)	3426	3347	1709091
216	27.3	14.7	3.9	chr18	13436201	13436303	(66936982)	+	L2a	LINE/L2	3311	3426	(0)	1709092
473	26.1	0.9	0.0	chr18	14970080	14970190	(65403095)	C	MER5A1	DNA/hAT-Charlie	(54)	112	1	1711062
2186	6.9	0.0	0.7	chr18	21611831	21612107	(58761178)	C	AluSq	SINE/Alu	(5)	308	34	1712919
2602	5.7	0.0	1.0	chr18	23179907	23180220	(57193065)	C	AluY	SINE/Alu	(0)	311	1	1715762
1992	11.5	8.0	0.0	chr18	23695540	23695826	(56677459)	+	AluSz	SINE/Alu	1	312	(0)	1716702
15	20.0	3.6	3.5	chr18	24014646	24014700	(56358585)	+	(CCGCGG)n	Simple_repeat	1	57	(0)	1717217
26	0.0	0.0	0.0	chr18	24014742	24014766	(56358519)	+	(CTCCC)n	Simple_repeat	1	25	(0)	1717218
662	31.3	19.3	1.9	chr18	25399505	25400151	(54973134)	+	L3	LINE/CR1	2236	3022	(1077)	1719282
1084	31.4	6.5	4.2	chr18	28203878	28204276	(52169009)	C	ERVL-E-int	LTR/ERVL	(3201)	2466	2039	1723456
1053	29.3	7.7	2.6	chr18	28204288	28204740	(52168545)	C	ERVL-E-int	LTR/ERVL	(3822)	1845	1368	1723456
562	35.7	3.9	3.6	chr18	29154892	29155199	(51218086)	C	L3	LINE/CR1	(2965)	1134	826	1724692
1952	23.8	4.0	5.4	chr18	29417971	29418526	(50954759)	C	MER44B	DNA/TcMar-Tigger	(0)	550	3	1725026
2485	8.8	0.3	0.0	chr18	32300625	32300932	(48072353)	+	AluSp	SINE/Alu	1	309	(4)	1729178
27	0.0	0.0	0.0	chr18	35343851	35343876	(45029409)	+	(CCCGGC)n	Simple_repeat	1	26	(0)	1733185
190	36.4	2.5	0.0	chr18	36309849	36309966	(44063319)	C	MIRc	SINE/MIR	(31)	237	117	1734629
12	18.1	2.4	4.8	chr18	36828617	36828657	(43544628)	+	(CCT)n	Simple_repeat	1	42	(0)	1735268
2231	14.9	5.8	0.0	chr18	36850419	36850806	(43522479)	C	MER44B	DNA/TcMar-Tigger	(0)	550	139	1735295
7153	17.5	3.3	0.6	chr18	36850807	36852322	(43520963)	C	L1ME1	LINE/L1	(1984)	4660	3102	1735294
2176	20.4	3.0	0.5	chr18	40868082	40868505	(39504780)	+	MER44B	DNA/TcMar-Tigger	1	435	(115)	1740601
25	13.7	0.0	0.0	chr18	42039105	42039144	(38334141)	+	(AC)n	Simple_repeat	1	40	(0)	1742258
340	35.2	11.3	3.2	chr18	42039317	42039777	(38333508)	+	L2b	LINE/L2	2730	3235	(152)	1742259
2324	17.6	4.8	4.8	chr18	43662553	43663012	(36710273)	C	LTR24	LTR/ERV1	(1)	466	7	1744474
237	38.0	1.0	0.0	chr18	43893187	43893286	(36479999)	C	MamSINE1	SINE/tRNA-RTE	(188)	102	2	1744799
405	33.4	3.6	1.4	chr18	44537424	44537577	(35835708)	C	MIR3	SINE/MIR	(56)	174	14	1745580
22	0.0	0.0	0.0	chr18	44537921	44537944	(35835341)	+	(AT)n	Simple_repeat	1	24	(0)	1745581
202	25.4	5.6	4.3	chr18	44589708	44589777	(35783508)	+	MER5B	DNA/hAT-Charlie	92	162	(16)	1745672
36	5.2	0.0	0.0	chr18	44590010	44590049	(35783236)	+	(GT)n	Simple_repeat	1	40	(0)	1745673
183	35.7	6.7	1.2	chr18	45803077	45803161	(34570124)	+	MamTip2	DNA/hAT-Tip100	47	136	(169)	1747458
3653	27.9	7.8	2.4	chr18	45803270	45805144	(34568141)	+	L1MEf	LINE/L1	435	2432	(4201)	1747459
2152	12.1	0.7	0.3	chr18	45951462	45951758	(34421527)	C	AluSx1	SINE/Alu	(14)	298	1	1747684
12	11.1	3.2	3.1	chr18	45967194	45967224	(34406061)	+	(TGGCCT)n	Simple_repeat	1	32	(0)	1747710
2270	22.6	2.9	1.9	chr18	46278042	46278556	(34094729)	+	LTR16E1	LTR/ERVL	19	538	(0)	1748366
192	30.8	20.3	1.7	chr18	46278557	46278728	(34094557)	C	L2c	LINE/L2	(939)	2480	2269	1748361
1317	18.1	0.0	0.0	chr18	46278744	46278959	(34094326)	+	MER20	DNA/hAT-Charlie	1	216	(3)	1748367
1261	20.4	3.8	5.2	chr18	48629950	48630218	(31743067)	+	Tigger7	DNA/TcMar-Tigger	1	265	(2226)	1752223
343	23.7	0.0	1.3	chr18	48630227	48630303	(31742982)	+	Tigger7	DNA/TcMar-Tigger	2408	2483	(8)	1752224
6508	20.7	3.9	4.2	chr18	48727106	48728379	(31644906)	C	MLT1F-int	LTR/ERVL-MaLR	(247)	1242	4	1752359
1797	26.1	4.8	4.8	chr18	48728382	48728924	(31644361)	C	MLT1F	LTR/ERVL-MaLR	(0)	560	18	1752359
877	26.3	1.3	0.8	chr18	48749597	48749826	(31623459)	C	MIR	SINE/MIR	(0)	230	1	1752391
245	33.3	2.3	10.2	chr18	48750067	48750324	(31622961)	C	MIRc	SINE/MIR	(0)	268	47	1752392
274	16.3	0.0	5.8	chr18	48834631	48834682	(31538603)	C	MIR3	SINE/MIR	(48)	160	112	1752511
204	24.4	5.5	2.3	chr18	48834854	48834941	(31538344)	C	MamRTE1	LINE/RTE-BovB	(3540)	272	182	1752512
417	33.6	10.7	1.4	chr18	48835017	48835236	(31538049)	+	MIRb	SINE/MIR	23	265	(3)	1752513
594	31.1	1.4	3.1	chr18	48873115	48873340	(31499945)	C	Tigger15a	DNA/TcMar-Tigger	(465)	250	29	1752569
215	29.4	4.9	6.2	chr18	48873384	48873528	(31499757)	C	MIRc	SINE/MIR	(73)	195	53	1752570
422	27.2	11.0	1.4	chr18	48873578	48873725	(31499560)	+	MIR1_Amn	SINE/MIR	14	172	(36)	1752571
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
3708	20.4	9.2	3.7	chr18	49689759	49690854	(30682431)	+	L1MC4a	LINE/L1	6644	7771	(14)	1754051
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
1757	15.4	0.4	1.8	chr18	50868805	50869084	(29504201)	+	AluJo	SINE/Alu	1	276	(36)	1755905
659	27.9	5.4	0.5	chr18	50869841	50870050	(29503235)	C	L1ME3	LINE/L1	(14)	6159	5951	1755907
1964	14.6	0.3	1.7	chr18	50870069	50870369	(29502916)	C	AluSz6	SINE/Alu	(15)	297	1	1755908
477	31.1	7.5	5.3	chr18	54776188	54776526	(25596759)	+	LTR84b	LTR/ERVL	414	760	(1)	1761747
248	24.6	1.7	0.0	chr18	54776527	54776583	(25596702)	C	L2a	LINE/L2	(70)	3356	3299	1761748
304	30.3	9.6	6.3	chr18	54776583	54776772	(25596513)	+	L2c	LINE/L2	3191	3387	(0)	1761745
632	15.2	0.0	1.0	chr18	55090851	55090950	(25282335)	C	MER44B	DNA/TcMar-Tigger	(0)	550	452	1762207
193	38.2	6.8	2.8	chr18	55250856	55251108	(25122177)	C	L2c	LINE/L2	(146)	3241	2978	1762455
323	31.7	6.3	8.0	chr18	55290982	55291207	(25082078)	C	MIRc	SINE/MIR	(15)	253	32	1762488
21	0.0	0.0	0.0	chr18	55406127	55406149	(24967136)	+	(T)n	Simple_repeat	1	23	(0)	1762625
220	36.3	5.2	2.0	chr18	55833905	55834053	(24539232)	C	L2	LINE/L2	(743)	2676	2523	1763261
20	21.3	1.6	3.1	chr18	56638607	56638669	(23734616)	+	G-rich	Low_complexity	1	64	(0)	1764412
324	22.9	0.0	2.8	chr18	56890993	56891064	(23482221)	+	MER5B	DNA/hAT-Charlie	102	171	(7)	1764773
244	27.0	14.0	0.0	chr18	57807198	57807271	(22566014)	+	UCON16	Unknown	68	153	(136)	1766221
565	14.0	2.1	0.0	chr18	57807277	57807369	(22565916)	C	AluJo	SINE/Alu	(0)	312	218	1766222
409	27.6	5.5	3.7	chr18	58186560	58186793	(22186492)	C	MIRb	SINE/MIR	(21)	247	9	1766941
267	26.9	12.6	0.0	chr18	58186799	58186902	(22186383)	C	MER5B	DNA/hAT-Charlie	(59)	119	1	1766942
229	22.4	9.3	11.7	chr18	58567394	58567504	(21805781)	C	MER5A1	DNA/hAT-Charlie	(50)	116	9	1767450
403	24.1	5.1	0.0	chr18	58567570	58567681	(21805604)	+	Tigger9a	DNA/TcMar-Tigger	1	118	(614)	1767451
866	20.9	9.3	3.5	chr18	58605160	58605362	(21767923)	+	MER58A	DNA/hAT-Charlie	4	219	(5)	1767517
14	16.9	0.0	2.9	chr18	58605393	58605427	(21767858)	+	(ATAG)n	Simple_repeat	1	35	(0)	1767518
224	29.5	5.4	5.4	chr18	58605434	58605544	(21767741)	C	L2c	LINE/L2	(0)	3387	3277	1767519
226	14.6	2.4	0.0	chr18	59716006	59716046	(20657239)	+	LTR19A	LTR/ERV1	318	359	(127)	1769369
225	31.0	9.6	6.0	chr18	59716230	59716380	(20656905)	+	MamSINE1	SINE/tRNA-RTE	71	227	(63)	1769370
13	27.1	3.4	1.6	chr18	59718226	59718234	(20655051)	+	(CATAGT)n	Simple_repeat	1	24	(37)	1769377
12	28.0	0.0	0.0	chr18	59718235	59718273	(20655012)	+	(ATC)n	Simple_repeat	1	39	(0)	1769378
13	27.1	3.4	1.6	chr18	59718274	59718284	(20655001)	+	(CATAGT)n	Simple_repeat	25	61	(0)	1769377
2063	14.3	0.3	0.3	chr18	59744531	59744830	(20628455)	C	AluSz	SINE/Alu	(12)	300	1	1769417
1279	10.2	0.0	1.7	chr18	59814797	59814972	(20558313)	+	AluSq2	SINE/Alu	135	307	(6)	1769548
1446	24.0	10.2	8.2	chr18	59814974	59815621	(20557664)	+	HAL1	LINE/L1	1663	2325	(182)	1769545
17	3.2	0.0	10.3	chr18	59899887	59899925	(20473360)	+	(GCGGG)n	Simple_repeat	1	39	(0)	1769753
16851	13.7	2.4	2.5	chr18	60443443	60447792	(19925493)	C	L1PA11	LINE/L1	(2133)	4328	13	1770531
23	20.3	7.6	0.0	chr18	62187169	62187247	(18186038)	+	G-rich	Low_complexity	1	85	(0)	1773094
12	28.8	0.0	0.0	chr18	62187299	62187340	(18185945)	+	(GCTGCA)n	Simple_repeat	1	42	(0)	1773095
1150	24.2	10.0	4.2	chr18	67425730	67426113	(12947172)	+	LTR40a	LTR/ERVL	111	519	(0)	1780446
1290	27.1	10.2	9.8	chr18	67426115	67426683	(12946602)	+	HERVL40-int	LTR/ERVL	1	571	(4959)	1780446
1846	14.7	0.0	2.9	chr18	67770952	67771230	(12602055)	+	AluSx	SINE/Alu	1	271	(41)	1780899
288	39.5	3.6	1.2	chr18	67783353	67783516	(12589769)	+	MIR3	SINE/MIR	34	201	(7)	1780914
12	16.5	0.0	0.0	chr18	68178131	68178157	(12195128)	+	(ATTT)n	Simple_repeat	1	27	(0)	1781421
1722	22.6	7.5	3.2	chr18	70044454	70044979	(10328306)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	1784006
2562	9.7	1.3	0.0	chr18	70357846	70358153	(10015132)	+	AluSz	SINE/Alu	1	312	(0)	1784453
2339	12.8	0.0	0.0	chr18	70358225	70358528	(10014757)	+	AluSz	SINE/Alu	1	304	(8)	1784454
181	28.0	0.0	0.0	chr18	70384294	70384343	(9988942)	C	MIRb	SINE/MIR	(96)	172	123	1784511
607	14.8	0.0	0.0	chr18	70384368	70384448	(9988837)	C	AluJb	SINE/Alu	(13)	299	219	1784512
5756	5.6	1.9	2.0	chr18	70384449	70385140	(9988145)	C	LTR8	LTR/ERV1	(0)	691	1	1784513
1934	27.5	4.9	7.2	chr18	73717285	73717788	(6655497)	+	MER97a	DNA/hAT-Tip100	386	890	(0)	1788946
217	21.4	0.0	0.0	chr18	76460262	76460303	(3912982)	C	MIR3	SINE/MIR	(61)	147	106	1792152
185	25.0	10.7	11.5	chr18	77067769	77067881	(3305404)	C	AmnSINE1	SINE/5S-Deu-L2	(300)	275	164	1793010
718	32.0	4.8	0.6	chr18	77128739	77129081	(3244204)	C	L1ME3Cz	LINE/L1	(541)	456	99	1793094
250	27.1	3.2	4.7	chr18	77129416	77129543	(3243742)	+	MLT2C2	LTR/ERVL	434	559	(0)	1793095
436	0.0	0.0	1.3	chr18	80262892	80263285	(110000)	+	(GTTAGG)n	Simple_repeat	1	394	(0)	1796346
662	19.5	9.4	0.0	chr19	295441	295594	(58322022)	+	MER53	DNA/hAT	24	193	(0)	1796702
239	27.7	6.7	0.0	chr19	628164	628246	(57989370)	+	MLT1C	LTR/ERVL-MaLR	351	439	(28)	1797249
376	23.4	3.6	0.0	chr19	628465	628571	(57989045)	+	Charlie4a	DNA/hAT-Charlie	286	396	(112)	1797250
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
15	24.6	1.9	1.9	chr19	1028682	1028743	(57588873)	+	G-rich	Low_complexity	1	62	(0)	1798104
14	8.5	0.0	3.7	chr19	1095317	1095343	(57522273)	+	(GCC)n	Simple_repeat	1	27	(0)	1798212
2274	9.8	1.0	0.0	chr19	1102237	1102532	(57515084)	+	AluSx	SINE/Alu	1	299	(13)	1798230
376	31.3	2.2	0.7	chr19	1177654	1177788	(57439828)	C	MIR	SINE/MIR	(81)	181	45	1798329
456	21.3	1.1	4.8	chr19	1177954	1178115	(57439501)	+	MIR	SINE/MIR	7	164	(66)	1798330
671	1.4	0.0	0.0	chr19	1383362	1383434	(57234182)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1798705
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
22	10.7	8.0	0.0	chr19	1407283	1407349	(57210267)	+	(CGCA)n	Simple_repeat	1	72	(0)	1798747
48	0.0	0.0	0.0	chr19	1407620	1407662	(57209954)	+	(GCC)n	Simple_repeat	1	43	(0)	1798748
189	32.6	2.2	0.0	chr19	1438118	1438212	(57179404)	C	MIR3	SINE/MIR	(80)	182	83	1798779
13	14.0	4.7	4.4	chr19	1940696	1940738	(56676878)	+	(CGCCGC)n	Simple_repeat	1	45	(0)	1799810
973	22.2	7.4	0.8	chr19	2295135	2295438	(56322178)	+	MLT1C	LTR/ERVL-MaLR	75	396	(71)	1800483
193	27.1	0.0	0.0	chr19	2461992	2462050	(56155566)	+	L2b	LINE/L2	3036	3094	(281)	1800844
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
224	35.2	6.1	2.1	chr19	2475041	2475182	(56142434)	+	MIRb	SINE/MIR	112	259	(9)	1800891
302	27.2	12.4	0.0	chr19	2491595	2491686	(56125930)	+	L2a	LINE/L2	3322	3426	(0)	1800925
842	27.7	15.1	4.2	chr19	2983201	2983942	(55633674)	C	L2a	LINE/L2	(2)	3424	2570	1802087
283	30.6	2.0	1.0	chr19	3141887	3141985	(55475631)	C	MIR3	SINE/MIR	(72)	136	37	1802495
239	32.6	10.1	3.0	chr19	3155444	3155544	(55462072)	C	MIRb	SINE/MIR	(116)	152	44	1802523
211	39.3	3.9	0.0	chr19	3434802	3434923	(55182693)	+	MIR3	SINE/MIR	38	164	(44)	1803276
28	20.5	5.4	2.0	chr19	3971044	3971136	(54646480)	+	(GCC)n	Simple_repeat	1	98	(0)	1804459
24	25.9	9.0	1.7	chr19	4123955	4124120	(54493496)	+	(CGAGGC)n	Simple_repeat	1	181	(0)	1804793
23	26.0	1.3	1.3	chr19	4400558	4400634	(54216982)	+	(CGCCCG)n	Simple_repeat	1	77	(0)	1805510
2300	8.6	0.0	4.9	chr19	4400907	4401232	(54216384)	C	AluSx	SINE/Alu	(2)	310	1	1805511
18	23.8	1.8	1.8	chr19	4402651	4402706	(54214910)	+	(GCG)n	Simple_repeat	1	57	(0)	1805516
15	12.6	8.9	2.0	chr19	4457698	4457742	(54159874)	+	(GGC)n	Simple_repeat	1	49	(0)	1805615
27	8.6	0.0	0.0	chr19	4457787	4457823	(54159793)	+	(A)n	Simple_repeat	1	37	(0)	1805616
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
1028	27.9	12.4	0.9	chr19	4870078	4870316	(53747300)	C	L2a	LINE/L2	(240)	3186	2935	1806723
194	18.4	9.3	0.0	chr19	4870318	4870366	(53747250)	C	MIR1_Amn	SINE/MIR	(105)	125	72	1806725
16	9.8	0.0	0.0	chr19	4870458	4870479	(53747137)	+	(T)n	Simple_repeat	1	22	(0)	1806726
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
13	15.8	2.7	2.6	chr19	5903566	5903602	(52714014)	+	(CCCTCGG)n	Simple_repeat	1	38	(0)	1809109
1549	28.3	4.6	0.8	chr19	6610667	6611315	(52006301)	C	L1M4	LINE/L1	(6018)	1499	825	1810715
16	23.5	1.5	4.5	chr19	7830142	7830206	(50787410)	+	G-rich	Low_complexity	1	66	(0)	1813826
12	22.0	4.8	4.5	chr19	8444846	8444908	(50172708)	+	G-rich	Low_complexity	1	66	(0)	1815352
686	27.0	4.4	5.3	chr19	9139913	9140213	(49477403)	C	L1MC4	LINE/L1	(578)	7464	7167	1816897
430	25.0	6.0	2.1	chr19	9140307	9140449	(49477167)	+	LTR33B	LTR/ERVL	77	225	(278)	1816898
734	14.9	0.0	8.1	chr19	9324511	9324658	(49292958)	+	FLAM_C	SINE/Alu	1	136	(7)	1817238
1352	11.4	0.0	0.5	chr19	10120092	10120104	(48497512)	+	AluSx1	SINE/Alu	120	132	(180)	1818935
2470	6.9	0.3	0.0	chr19	10120105	10120407	(48497209)	+	AluSx	SINE/Alu	1	304	(8)	1818936
236	26.9	0.0	0.0	chr19	11344712	11344763	(47272853)	+	MER91A	DNA/hAT-Tip100	1	52	(144)	1822104
824	22.9	9.3	1.8	chr19	11346903	11347120	(47270496)	C	MIR	SINE/MIR	(26)	236	1	1822107
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
2540	4.4	0.3	0.3	chr19	12682007	12682304	(45935312)	C	AluYc	SINE/Alu	(0)	299	2	1824985
38	8.5	0.0	0.0	chr19	12722562	12722612	(45895004)	+	(A)n	Simple_repeat	1	51	(0)	1825078
11	32.1	0.0	3.3	chr19	12946211	12946271	(45671345)	+	(GCCCCG)n	Simple_repeat	1	61	(0)	1825595
311	39.1	7.0	1.4	chr19	13037336	13037620	(45579996)	+	L3b	LINE/CR1	4709	5010	(222)	1825790
19	12.8	0.0	0.0	chr19	13102443	13102476	(45515140)	+	(TGAA)n	Simple_repeat	1	34	(0)	1825875
245	27.9	0.0	1.6	chr19	13116869	13116930	(45500686)	C	MIRb	SINE/MIR	(93)	175	115	1825904
19	0.0	2.9	5.7	chr19	13154187	13154222	(45463394)	+	(TGTT)n	Simple_repeat	1	35	(0)	1825987
2350	10.2	0.0	0.0	chr19	13730867	13731170	(44886446)	+	AluSx4	SINE/Alu	1	304	(6)	1827636
2383	3.9	0.0	1.1	chr19	13832811	13833091	(44784525)	+	AluY	SINE/Alu	1	278	(33)	1827923
420	28.2	9.1	1.6	chr19	13833092	13833125	(44784491)	C	MIRb	SINE/MIR	(182)	86	44	1827922
265	26.8	14.1	0.4	chr19	13837227	13837400	(44780216)	+	MIR1_Amn	SINE/MIR	26	233	(35)	1827927
12	16.0	5.7	0.0	chr19	13851404	13851438	(44766178)	+	(TCCCTAC)n	Simple_repeat	1	37	(0)	1827956
14	21.5	4.0	1.9	chr19	14118063	14118112	(44499504)	+	G-rich	Low_complexity	1	52	(0)	1828626
773	26.6	2.3	3.6	chr19	14519980	14520201	(44097415)	+	MIR	SINE/MIR	23	241	(21)	1829703
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
192	32.4	5.4	5.4	chr19	15419323	15419433	(43198183)	+	MIR3	SINE/MIR	18	128	(80)	1831770
17	0.0	0.0	0.0	chr19	16078831	16078849	(42538767)	+	(A)n	Simple_repeat	1	19	(0)	1833074
12	11.6	4.7	6.7	chr19	16111699	16111741	(42505875)	+	(GCGCTCC)n	Simple_repeat	1	45	(0)	1833149
864	21.3	3.4	2.0	chr19	16279103	16279303	(42338313)	+	MER20	DNA/hAT-Charlie	10	213	(6)	1833577
13	8.5	0.0	3.7	chr19	16279366	16279392	(42338224)	+	(ATTTG)n	Simple_repeat	1	27	(0)	1833578
228	11.1	0.0	0.0	chr19	16279408	16279443	(42338173)	+	MSTC	LTR/ERVL-MaLR	1	36	(392)	1833579
2145	12.8	0.0	1.0	chr19	16279449	16279753	(42337863)	+	AluSx	SINE/Alu	1	302	(10)	1833580
850	9.2	0.0	2.5	chr19	16330775	16330893	(42286723)	+	AluJo	SINE/Alu	2	117	(195)	1833732
579	13.8	11.2	4.3	chr19	17215131	17215246	(41402370)	C	AluJr	SINE/Alu	(187)	125	1	1835760
16	24.4	1.6	4.7	chr19	18323042	18323104	(40294512)	+	(CGC)n	Simple_repeat	1	64	(0)	1838616
16	22.1	0.0	0.0	chr19	18374648	18374679	(40242937)	+	G-rich	Low_complexity	1	32	(0)	1838751
12	19.9	2.3	4.4	chr19	18919177	18919220	(39698396)	+	(CCTCCG)n	Simple_repeat	1	45	(0)	1839829
16	3.2	5.6	5.3	chr19	18919308	18919343	(39698273)	+	(CCGGAGG)n	Simple_repeat	1	38	(0)	1839830
24	23.2	2.3	7.6	chr19	19385915	19385974	(39231642)	+	(CGCCGC)n	Simple_repeat	1	67	(55)	1840892
12	4.7	4.5	0.0	chr19	19385975	19385996	(39231620)	+	(GTCG)n	Simple_repeat	1	23	(0)	1840893
2515	4.5	1.0	0.3	chr19	20424328	20424619	(38192997)	C	AluY	SINE/Alu	(16)	295	2	1842627
2190	11.0	1.0	0.0	chr19	23394449	23394748	(35222868)	+	AluSx1	SINE/Alu	1	303	(9)	1846613
2688	15.7	0.8	2.2	chr19	23394749	23394969	(35222647)	+	MER57E3	LTR/ERV1	270	487	(0)	1846612
1555	12.2	0.0	0.0	chr19	23914053	23914282	(34703334)	+	MER41C	LTR/ERV1	1	230	(291)	1847339
2138	11.3	0.0	3.0	chr19	23914290	23914590	(34703026)	+	AluSq2	SINE/Alu	1	292	(21)	1847342
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
2507	10.7	0.0	0.3	chr19	34217994	34218303	(24399313)	C	AluSx3	SINE/Alu	(2)	309	1	1858175
13	24.5	2.3	0.0	chr19	34481854	34481896	(24135720)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	1858733
2148	10.7	0.7	2.3	chr19	35758661	35758970	(22858646)	C	AluSx1	SINE/Alu	(6)	306	2	1861079
2023	10.9	0.4	0.7	chr19	36070146	36070419	(22547197)	C	AluSx1	SINE/Alu	(0)	312	40	1861805
757	33.1	10.8	4.5	chr19	36070670	36070925	(22546691)	C	Kanga11a	DNA/TcMar-Tc2	(439)	531	244	1861806
320	20.9	2.9	0.0	chr19	36850363	36850429	(21767187)	C	MER67D	LTR/ERV1	(1)	513	445	1863382
711	18.1	11.3	3.1	chr19	36850413	36850663	(21766953)	C	MER31B	LTR/ERV1	(74)	392	1	1863383
2253	10.3	0.0	1.6	chr19	37210885	37211196	(21406420)	C	AluSz	SINE/Alu	(4)	308	2	1864025
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
477	25.3	0.5	0.0	chr19	37997986	37998110	(20619506)	+	MIR	SINE/MIR	38	165	(103)	1865583
257	22.6	1.6	6.1	chr19	37998103	37998168	(20619448)	+	L2a	LINE/L2	3364	3426	(0)	1865584
633	25.4	0.9	9.6	chr19	37998394	37998499	(20619117)	+	L1MC5a	LINE/L1	2517	2622	(155)	1865585
433	23.3	5.7	0.0	chr19	37999885	38000000	(20617616)	+	MIR	SINE/MIR	1	123	(139)	1865588
297	24.9	21.4	2.8	chr19	38300505	38300681	(20316935)	C	MIRc	SINE/MIR	(8)	254	49	1866337
193	33.9	4.4	0.0	chr19	38300792	38300856	(20316760)	C	L2a	LINE/L2	(72)	3354	3287	1866338
2298	11.2	0.0	0.0	chr19	38835041	38835345	(19782271)	C	AluSq2	SINE/Alu	(8)	305	1	1867555
1392	16.2	8.4	3.7	chr19	38835346	38835474	(19782142)	C	AluJb	SINE/Alu	(178)	134	2	1867554
393	29.0	11.1	3.5	chr19	38835475	38835651	(19781965)	+	L1M5	LINE/L1	5608	5798	(326)	1867553
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
550	22.7	8.4	8.4	chr19	39078436	39078637	(19538979)	C	MIR	SINE/MIR	(41)	221	20	1868191
546	31.2	5.0	1.4	chr19	39078842	39079052	(19538564)	C	MIRb	SINE/MIR	(0)	268	50	1868192
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
15	25.0	0.0	2.0	chr19	40663310	40663358	(17954258)	+	G-rich	Low_complexity	1	49	(0)	1871651
30	0.0	0.0	0.0	chr19	40715846	40715871	(17901745)	+	(TG)n	Simple_repeat	1	26	(0)	1871775
193	30.9	11.8	0.0	chr19	40716067	40716163	(17901453)	+	MIR3	SINE/MIR	82	191	(17)	1871776
16	25.4	6.6	1.2	chr19	40717230	40717305	(17900311)	+	(GGC)n	Simple_repeat	1	81	(0)	1871779
17	30.2	0.0	1.8	chr19	41225808	41225862	(17391754)	+	(TG)n	Simple_repeat	1	55	(0)	1872925
22	3.8	0.0	0.0	chr19	41261986	41262012	(17355604)	+	(CA)n	Simple_repeat	1	27	(0)	1873025
23	18.7	0.0	0.0	chr19	41352982	41353030	(17264586)	+	(CAGCAG)n	Simple_repeat	1	49	(0)	1873223
1771	12.1	2.9	2.2	chr19	41367659	41367931	(17249685)	C	AluJo	SINE/Alu	(37)	275	1	1873262
1152	12.0	4.4	0.0	chr19	41367933	41368107	(17249509)	C	LTR24	LTR/ERV1	(277)	190	8	1873258
1627	17.9	0.0	3.5	chr19	41368125	41368414	(17249202)	+	AluJr	SINE/Alu	1	280	(32)	1873263
1822	11.6	0.0	9.1	chr19	41440093	41440421	(17177195)	+	AluJr	SINE/Alu	14	312	(0)	1873439
237	33.3	14.5	0.7	chr19	41872940	41873081	(16744535)	C	MIR	SINE/MIR	(85)	177	13	1874092
181	33.0	13.8	0.0	chr19	41873514	41873613	(16744003)	C	MIRb	SINE/MIR	(34)	234	119	1874093
350	31.1	7.0	1.0	chr19	42113578	42113767	(16503849)	+	L2b	LINE/L2	3219	3423	(3)	1874605
1941	20.6	4.5	7.1	chr19	42851138	42851909	(15765707)	+	LTR8B	LTR/ERV1	14	816	(4)	1875878
1949	20.6	4.5	6.8	chr19	43021891	43022651	(15594965)	+	LTR8B	LTR/ERV1	13	816	(4)	1876120
1653	23.7	4.5	0.7	chr19	43127309	43127746	(15489870)	+	L1MEc	LINE/L1	472	1247	(1505)	1876265
3302	19.7	8.2	4.2	chr19	43201101	43201872	(15415744)	+	LTR8B	LTR/ERV1	13	818	(2)	1876378
766	29.6	9.3	6.9	chr19	43701271	43701659	(14915957)	C	L2a	LINE/L2	(3)	3423	3025	1877470
1013	15.8	0.0	6.6	chr19	43701680	43701862	(14915754)	+	AluJr	SINE/Alu	1	171	(141)	1877471
183	32.7	5.6	3.8	chr19	43765460	43765564	(14852052)	+	MIR1_Amn	SINE/MIR	52	158	(72)	1877621
273	29.1	8.5	3.8	chr19	43984557	43984713	(14632903)	+	MIR	SINE/MIR	70	234	(28)	1878008
21	4.1	0.0	0.0	chr19	44212367	44212391	(14405225)	+	(T)n	Simple_repeat	1	25	(0)	1878385
2499	10.6	0.6	0.6	chr19	44625711	44626069	(13991547)	+	THE1B	LTR/ERVL-MaLR	1	359	(5)	1879159
11	25.1	2.2	2.2	chr19	44753586	44753630	(13863986)	+	(ACCGGC)n	Simple_repeat	1	46	(0)	1879532
22	26.8	5.4	2.5	chr19	44955347	44955458	(13662158)	+	(CGG)n	Simple_repeat	1	118	(0)	1880074
1963	13.7	2.0	0.0	chr19	45092495	45092786	(13524830)	C	AluJr	SINE/Alu	(14)	298	1	1880444
827	25.3	3.1	10.1	chr19	45424217	45424524	(13193092)	C	L2b	LINE/L2	(0)	3375	3090	1881264
493	26.8	4.3	3.5	chr19	45424530	45424908	(13192708)	C	L1ME3G	LINE/L1	(769)	5377	5059	1881265
803	0.0	0.0	0.0	chr19	45478602	45478687	(13138929)	C	tRNA-SeC(e)-TGA	tRNA	(3)	86	1	1881421
12	16.3	7.0	2.2	chr19	45770291	45770333	(12847283)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	1882222
2051	9.9	5.2	3.3	chr19	46262686	46262988	(12354628)	+	AluSz	SINE/Alu	3	311	(1)	1883226
258	14.8	3.3	20.7	chr19	46262989	46263050	(12354566)	C	LTR24B	LTR/ERV1	(448)	128	70	1883225
14	10.4	6.5	0.0	chr19	46263173	46263203	(12354413)	+	GA-rich	Low_complexity	1	33	(0)	1883227
571	18.2	7.2	4.1	chr19	46851218	46851338	(11766278)	C	AluJr4	SINE/Alu	(179)	133	9	1884739
64	2.4	6.9	0.0	chr19	47048969	47049055	(11568561)	+	(TCTT)n	Simple_repeat	1	93	(0)	1885144
25	7.9	0.0	4.4	chr19	47049057	47049101	(11568515)	+	(TCCC)n	Simple_repeat	1	45	(0)	1885145
525	26.2	18.0	0.8	chr19	47130394	47130632	(11486984)	+	L2a	LINE/L2	3130	3418	(8)	1885343
12	22.4	0.0	6.4	chr19	47130933	47130979	(11486637)	+	GA-rich	Low_complexity	1	47	(0)	1885344
378	32.1	9.9	6.5	chr19	47225656	47226058	(11391558)	+	L1ME3Cz	LINE/L1	566	997	(0)	1885593
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
13	18.1	4.2	4.0	chr19	47719262	47719309	(10898307)	+	(GGCAG)n	Simple_repeat	1	50	(0)	1886868
13	20.9	0.0	0.0	chr19	47719469	47719501	(10898115)	+	(AGCCC)n	Simple_repeat	1	33	(0)	1886869
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
201	30.9	12.7	0.0	chr19	48363008	48363126	(10254490)	C	MIR1_Amn	SINE/MIR	(108)	160	26	1888574
345	25.0	4.3	2.2	chr19	48872961	48873050	(9744566)	C	MSR1	Satellite	(1)	110	19	1889836
181	18.0	0.0	10.7	chr19	48954548	48954603	(9663013)	+	L2	LINE/L2	3019	3068	(351)	1890057
15	21.0	1.8	5.4	chr19	48954872	48954926	(9662690)	+	(GGC)n	Simple_repeat	1	56	(0)	1890063
821	14.5	0.0	8.3	chr19	49452002	49452146	(9165470)	+	FLAM_C	SINE/Alu	1	133	(10)	1891121
332	22.1	2.8	4.8	chr19	49640837	49640967	(8976649)	C	MSR1	Satellite	(0)	128	1	1891595
17	10.7	0.0	0.0	chr19	49642185	49642214	(8975402)	+	(CCCCG)n	Simple_repeat	1	30	(0)	1891598
1859	11.0	6.5	0.7	chr19	50026289	50026580	(8591036)	+	AluSx1	SINE/Alu	3	312	(0)	1892448
19	0.0	0.0	0.0	chr19	50607990	50608010	(8009606)	+	(A)n	Simple_repeat	1	21	(0)	1893906
13	13.6	4.3	6.2	chr19	50725315	50725360	(7892256)	+	(GCCCA)n	Simple_repeat	1	48	(0)	1894171
217	29.5	5.2	5.8	chr19	51690676	51690812	(6926804)	+	MIR3	SINE/MIR	58	193	(15)	1896053
1966	14.5	0.3	0.7	chr19	51703515	51703824	(6913792)	+	AluJr	SINE/Alu	1	309	(3)	1896077
214	32.0	1.0	4.8	chr19	53977759	53977863	(4639753)	C	MIR3	SINE/MIR	(23)	185	85	1900727
20	35.1	3.9	1.5	chr19	53978791	53978917	(4638699)	+	GA-rich	Low_complexity	1	132	(0)	1900729
19	13.1	5.6	3.5	chr19	53978865	53978918	(4638698)	+	G-rich	Low_complexity	1	57	(0)	1900730
2154	10.8	1.0	2.9	chr19	54448652	54448966	(4168650)	+	AluSg	SINE/Alu	1	309	(1)	1901778
228	33.2	4.7	3.6	chr19	55209958	55210120	(3407496)	+	L2c	LINE/L2	3013	3181	(194)	1903234
522	28.3	8.3	2.9	chr19	55210125	55210328	(3407288)	+	MIR	SINE/MIR	43	258	(4)	1903235
1779	11.8	10.6	0.0	chr19	55216200	55216462	(3401154)	C	AluSx	SINE/Alu	(15)	297	4	1903254
16	4.5	0.0	0.0	chr19	55338918	55338940	(3278676)	+	(AAAC)n	Simple_repeat	1	23	(0)	1903539
305	31.3	0.0	0.0	chr19	55385569	55385651	(3231965)	C	L2a	LINE/L2	(1)	3425	3343	1903625
12	19.3	0.0	5.1	chr19	55600208	55600246	(3017370)	+	(GCGG)n	Simple_repeat	1	39	(0)	1904120
19	11.3	2.5	2.4	chr19	55600272	55600311	(3017305)	+	(GCC)n	Simple_repeat	1	41	(0)	1904121
21	13.8	0.0	7.3	chr19	55605591	55605645	(3011971)	+	G-rich	Low_complexity	1	55	(0)	1904131
14	12.7	0.0	0.0	chr19	55605687	55605712	(3011904)	+	(CCT)n	Simple_repeat	1	26	(0)	1904132
13	34.3	1.6	0.0	chr19	55654291	55654353	(2963263)	+	(TCCCCT)n	Simple_repeat	1	64	(0)	1904235
26	0.0	0.0	0.0	chr19	57363364	57363388	(1254228)	+	(TGCG)n	Simple_repeat	1	25	(0)	1907684
3606	11.2	5.4	1.1	chr19	57579173	57579723	(1037893)	C	MER4D1	LTR/ERV1	(324)	576	1	1908004
188	26.7	0.0	0.0	chr19	57849636	57849680	(767936)	C	L2c	LINE/L2	(312)	3075	3031	1908433
3638	6.1	5.0	3.9	chr19	58277944	58278458	(339158)	+	MER41C	LTR/ERV1	1	521	(0)	1909251
7941	3.4	12.7	0.7	chr19	58606191	58607452	(10164)	+	TAR1	Satellite/telo	314	1748	(363)	1909801
139	3.3	0.6	2.4	chr19	58607453	58607616	(10000)	+	(GGGTTA)n	Simple_repeat	1	165	(0)	1909802
302	23.9	0.0	1.5	chr2	3379351	3379418	(238814111)	C	L1ME4a	LINE/L1	(8)	6116	6050	1914394
1468	26.2	9.0	5.3	chr2	3571243	3572058	(238621471)	+	L1MC4a	LINE/L1	5283	6004	(1878)	1914677
14	24.3	2.0	2.0	chr2	3575498	3575547	(238617982)	+	G-rich	Low_complexity	1	51	(0)	1914686
189	33.3	3.5	1.4	chr2	7191849	7191988	(235001541)	+	MIRb	SINE/MIR	3	145	(123)	1919563
1306	19.3	4.6	3.9	chr2	7192432	7192711	(235000818)	+	AluJr	SINE/Alu	1	282	(30)	1919564
265	29.3	7.4	6.8	chr2	7708082	7708242	(234485287)	+	MIR3	SINE/MIR	3	164	(44)	1920294
2410	15.3	1.2	0.7	chr2	8147950	8148347	(234045182)	C	MLT2D	LTR/ERVL	(40)	515	1	1920949
366	32.9	3.1	0.6	chr2	8148348	8148503	(234045026)	C	MIR	SINE/MIR	(99)	163	4	1920959
384	24.8	19.8	1.5	chr2	9381242	9381446	(232812083)	+	MIRb	SINE/MIR	4	255	(13)	1922839
1698	18.1	0.3	1.4	chr2	9381452	9381744	(232811785)	+	AluJr4	SINE/Alu	1	290	(22)	1922840
215	30.1	9.8	9.8	chr2	9386750	9386903	(232806626)	C	MIR3	SINE/MIR	(96)	172	19	1922853
2428	5.2	0.0	3.3	chr2	9386923	9387227	(232806302)	+	AluY	SINE/Alu	1	295	(16)	1922854
625	28.6	11.1	9.8	chr2	9655331	9655598	(232537931)	+	L3	LINE/CR1	3814	4083	(16)	1923373
2309	11.4	0.3	0.0	chr2	9656055	9656362	(232537167)	+	AluSx3	SINE/Alu	1	309	(2)	1923375
1747	13.8	8.2	0.3	chr2	9656690	9656971	(232536558)	+	AluSz	SINE/Alu	1	306	(6)	1923376
328	29.8	6.8	2.4	chr2	9675341	9675550	(232517979)	+	Tigger14a	DNA/TcMar-Tigger	76	295	(29)	1923414
425	19.1	5.4	0.9	chr2	9975922	9976027	(232217502)	+	MIR	SINE/MIR	78	188	(74)	1923966
314	30.4	7.8	6.5	chr2	10658516	10658744	(231534785)	+	MER103C	DNA/hAT-Charlie	10	241	(56)	1925165
1171	14.8	0.0	0.6	chr2	10658796	10658957	(231534572)	+	AluJo	SINE/Alu	1	161	(151)	1925166
15	16.3	2.9	0.0	chr2	10936134	10936168	(231257361)	+	(AATG)n	Simple_repeat	1	36	(0)	1925754
12	25.6	0.0	0.0	chr2	10936254	10936287	(231257242)	+	(GAAT)n	Simple_repeat	1	34	(0)	1925755
1832	17.0	4.0	4.5	chr2	11394281	11394439	(230799090)	C	Arthur1	DNA/hAT-Tip100	(0)	3947	3785	1926558
1825	12.7	6.2	2.0	chr2	11466438	11466729	(230726800)	C	AluJo	SINE/Alu	(7)	305	1	1926688
198	35.2	10.7	0.7	chr2	12070451	12070593	(230122936)	+	L2c	LINE/L2	3163	3321	(66)	1927717
2453	12.2	0.0	0.0	chr2	12106068	12106378	(230087151)	+	AluSp	SINE/Alu	1	311	(2)	1927788
230	27.4	13.5	3.6	chr2	12619789	12619928	(229573601)	+	MamRep605	LTR?	455	610	(239)	1928597
758	30.2	4.8	4.8	chr2	12620217	12620612	(229572917)	+	LTR33A_	LTR/ERVL	69	464	(67)	1928598
314	25.7	0.9	13.7	chr2	12948587	12948717	(229244812)	+	LTR91	LTR/ERVL	86	199	(0)	1929147
205	29.3	1.7	0.0	chr2	17643180	17643237	(224550292)	+	L2b	LINE/L2	3312	3370	(5)	1936296
494	30.4	1.4	0.7	chr2	17643525	17643663	(224549866)	C	L2b	LINE/L2	(0)	3375	3236	1936297
2618	9.9	8.2	0.5	chr2	20067650	20068044	(222125485)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1939700
2976	21.5	6.7	1.6	chr2	20068045	20068101	(222125428)	C	L1ME1	LINE/L1	(729)	5450	5394	1939699
417	16.3	12.5	1.0	chr2	20068211	20068309	(222125220)	+	L1ME4b	LINE/L1	418	529	(363)	1939701
1342	23.2	6.1	8.1	chr2	20068312	20068780	(222124749)	C	MLT2C2	LTR/ERVL	(0)	464	6	1939702
25	20.3	1.5	2.9	chr2	20350704	20350770	(221842759)	+	(TCC)n	Simple_repeat	1	68	(0)	1940192
31	0.0	0.0	0.0	chr2	20425654	20425682	(221767847)	+	(CAG)n	Simple_repeat	1	29	(0)	1940343
1987	15.0	13.0	9.1	chr2	20425686	20425823	(221767706)	+	MLT2B4	LTR/ERVL	2	105	(451)	1940344
1499	16.1	0.4	0.4	chr2	20425824	20426053	(221767476)	C	AluSx3	SINE/Alu	(80)	231	2	1940345
11	20.8	6.8	0.0	chr2	20823252	20823295	(221370234)	+	(TTTTCA)n	Simple_repeat	1	47	(0)	1940916
435	33.1	5.2	0.0	chr2	23524080	23524260	(218669269)	C	MIRc	SINE/MIR	(70)	198	8	1944490
893	14.9	0.0	0.8	chr2	23602620	23602753	(218590776)	C	FLAM_C	SINE/Alu	(10)	133	1	1944592
242	25.9	2.3	14.1	chr2	25103169	25103267	(217090262)	+	L2a	LINE/L2	3291	3416	(10)	1947307
322	19.4	1.5	2.9	chr2	25103384	25103452	(217090077)	+	MIR3	SINE/MIR	126	193	(15)	1947308
13	21.2	2.6	0.0	chr2	26244721	26244758	(215948771)	+	(TGGCCCC)n	Simple_repeat	1	39	(0)	1949598
2973	16.1	6.9	0.8	chr2	26757784	26758302	(215435227)	C	MER41A	LTR/ERV1	(0)	554	2	1950548
271	27.7	13.6	1.9	chr2	26988668	26988829	(215204700)	+	MER5A	DNA/hAT-Charlie	5	188	(1)	1951004
18	11.6	0.0	4.9	chr2	27032889	27032929	(215160600)	+	G-rich	Low_complexity	1	41	(0)	1951084
16	19.6	0.0	4.4	chr2	27033067	27033111	(215160418)	+	(CGG)n	Simple_repeat	1	45	(0)	1951085
577	6.8	0.0	0.0	chr2	27051214	27051287	(215142242)	+	tRNA-Ala-GCY	tRNA	1	74	(2)	1951108
33	0.0	0.0	0.0	chr2	27086722	27086752	(215106777)	+	(CGGGG)n	Simple_repeat	1	31	(0)	1951151
14	9.3	0.0	0.0	chr2	27380692	27380714	(214812815)	+	(GCC)n	Simple_repeat	1	23	(0)	1951698
800	24.5	4.6	1.9	chr2	27623454	27623665	(214569864)	+	L1M5	LINE/L1	5519	5736	(387)	1952138
261	22.7	2.6	2.6	chr2	27627986	27628062	(214565467)	C	L2a	LINE/L2	(1)	3425	3349	1952144
559	18.9	7.0	2.2	chr2	27628104	27628238	(214565291)	C	MIRb	SINE/MIR	(84)	184	43	1952145
40	4.8	0.0	0.0	chr2	27720178	27720220	(214473309)	+	(GT)n	Simple_repeat	1	43	(0)	1952346
604	30.8	8.3	0.9	chr2	27960594	27960816	(214232713)	C	MIRc	SINE/MIR	(15)	253	13	1952789
808	26.0	4.8	0.1	chr2	28230999	28231239	(213962290)	+	MIRb	SINE/MIR	2	258	(10)	1953212
195	26.1	5.5	1.4	chr2	28584145	28584214	(213609315)	+	L2b	LINE/L2	3303	3375	(0)	1953819
2532	6.6	0.0	0.3	chr2	28596982	28597283	(213596246)	+	AluY	SINE/Alu	1	301	(10)	1953833
238	31.1	15.7	3.4	chr2	28610557	28610789	(213582740)	C	L3	LINE/CR1	(374)	3725	3459	1953853
306	31.1	6.9	4.5	chr2	28610808	28610962	(213582567)	C	L3	LINE/CR1	(146)	3953	3795	1953856
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
238	20.4	20.7	2.2	chr2	31382778	31382867	(210810662)	C	MER5A	DNA/hAT-Charlie	(24)	165	55	1958440
513	17.4	3.5	6.0	chr2	31382800	31382915	(210810614)	+	MER5A	DNA/hAT-Charlie	77	189	(0)	1958441
613	16.7	5.7	4.2	chr2	31385092	31385211	(210808318)	+	AluJr	SINE/Alu	178	299	(13)	1958446
293	32.1	12.6	0.5	chr2	31441021	31441238	(210752291)	C	MIRb	SINE/MIR	(12)	256	4	1958523
247	29.3	9.2	2.9	chr2	31476453	31476624	(210716905)	C	L2a	LINE/L2	(1152)	2267	2084	1958563
867	22.6	7.9	0.5	chr2	31476650	31476849	(210716680)	+	MLT1F1	LTR/ERVL-MaLR	354	569	(0)	1958566
261	32.0	9.0	5.5	chr2	31476851	31477085	(210716444)	C	L2a	LINE/L2	(1427)	1992	1749	1958563
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
255	33.8	9.4	1.9	chr2	32165504	32165604	(210027925)	+	MIRb	SINE/MIR	107	221	(47)	1959676
1517	18.8	6.9	1.7	chr2	32423301	32423657	(209769872)	C	L1MB4	LINE/L1	(12)	6769	6393	1960294
2546	21.3	8.0	2.9	chr2	32423675	32424362	(209769167)	+	MER44C	DNA/TcMar-Tigger	8	733	(0)	1960295
464	29.8	10.0	2.4	chr2	32865884	32866096	(209327433)	+	MIR	SINE/MIR	32	262	(0)	1961100
1912	16.9	2.0	2.8	chr2	33068265	33068659	(209124870)	C	L1MC1	LINE/L1	(0)	6333	5942	1961422
1189	17.6	4.6	1.1	chr2	33068662	33068936	(209124593)	+	MER58D	DNA/hAT-Charlie	102	386	(0)	1961423
660	27.4	9.3	1.7	chr2	33158539	33158776	(209034753)	+	LTR90A	LTR	706	963	(13)	1961544
1081	24.4	10.3	1.9	chr2	33166898	33167324	(209026205)	+	Tigger13a	DNA/TcMar-Tigger	1	467	(304)	1961556
279	30.9	4.0	8.7	chr2	33426773	33426956	(208766573)	+	MLT1K	LTR/ERVL-MaLR	224	398	(197)	1961942
15	18.5	5.9	1.9	chr2	36355764	36355818	(205837711)	+	(GGAGC)n	Simple_repeat	1	57	(0)	1965962
15	20.1	5.7	1.8	chr2	36355925	36355977	(205837552)	+	(CGC)n	Simple_repeat	1	56	(0)	1965963
19	0.0	3.9	0.0	chr2	36356042	36356067	(205837462)	+	(GGA)n	Simple_repeat	1	27	(0)	1965964
12	20.0	0.0	0.0	chr2	36356265	36356293	(205837236)	+	GA-rich	Low_complexity	1	29	(0)	1965965
23	15.3	0.0	0.0	chr2	36379727	36379764	(205813765)	+	(T)n	Simple_repeat	1	38	(0)	1965987
14	12.9	2.6	5.1	chr2	36381455	36381492	(205812037)	+	GA-rich	Low_complexity	1	39	(0)	1965988
332	26.0	12.4	3.4	chr2	36403755	36403929	(205789600)	C	L2	LINE/L2	(896)	2523	2331	1966017
570	25.8	8.5	1.5	chr2	36438805	36438956	(205754573)	+	MIRb	SINE/MIR	18	184	(84)	1966059
241	30.1	13.5	4.4	chr2	36455602	36455962	(205737567)	C	L2	LINE/L2	(2803)	616	218	1966079
1536	20.1	15.2	4.7	chr2	36561906	36562369	(205631160)	+	Charlie1b	DNA/hAT-Charlie	1	521	(2)	1966187
12	26.7	4.1	0.0	chr2	37157099	37157147	(205036382)	+	(GGCG)n	Simple_repeat	1	51	(0)	1967232
311	29.5	10.4	2.7	chr2	37459572	37459721	(204733808)	+	Tigger12c	DNA/TcMar-Tigger	572	734	(0)	1967769
1036	28.3	1.3	1.3	chr2	37561720	37562030	(204631499)	+	MLT1I	LTR/ERVL-MaLR	63	373	(38)	1967918
2893	14.5	3.1	0.4	chr2	37562132	37562635	(204630894)	C	MER44B	DNA/TcMar-Tigger	(0)	550	33	1967919
407	35.8	10.4	4.7	chr2	37699370	37700122	(204493407)	C	L2c	LINE/L2	(179)	3208	2412	1968115
373	29.0	8.0	1.4	chr2	37781416	37781555	(204411974)	+	MIR	SINE/MIR	48	197	(65)	1968233
437	24.4	7.1	3.1	chr2	37916554	37916714	(204276815)	+	MIRc	SINE/MIR	86	253	(15)	1968463
498	29.4	20.9	0.8	chr2	38147018	38147411	(204046118)	+	L2a	LINE/L2	2917	3410	(16)	1968743
15	0.0	0.0	0.0	chr2	38778058	38778076	(203415453)	+	(ATT)n	Simple_repeat	1	19	(0)	1969948
17	29.8	6.9	2.2	chr2	39481550	39481679	(202711850)	+	(ATGTAT)n	Simple_repeat	1	139	(0)	1971289
2300	12.2	0.0	0.0	chr2	39494487	39494797	(202698732)	+	AluSz6	SINE/Alu	2	312	(0)	1971320
198	17.9	2.5	0.0	chr2	40193015	40193053	(202000476)	+	MIRb	SINE/MIR	217	256	(12)	1972237
393	27.3	8.3	2.9	chr2	42118163	42118298	(200075231)	+	MER5A1	DNA/hAT-Charlie	16	159	(7)	1974979
244	37.8	4.0	0.8	chr2	42420932	42421051	(199772478)	+	MamSINE1	SINE/tRNA-RTE	107	230	(60)	1975520
465	36.3	12.2	2.3	chr2	42421189	42421453	(199772076)	C	L2b	LINE/L2	(0)	3375	3081	1975521
558	23.8	16.5	2.4	chr2	42619421	42619674	(199573855)	+	L1M5	LINE/L1	4351	4647	(1499)	1976017
28	0.0	3.3	0.0	chr2	42810107	42810136	(199383393)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1976361
1616	25.5	6.6	1.9	chr2	43059465	43059929	(199133600)	C	MLT1G1	LTR/ERVL-MaLR	(0)	591	57	1976793
184	32.8	0.0	0.0	chr2	43168382	43168439	(199025090)	C	L2c	LINE/L2	(61)	3326	3269	1977025
19	0.0	0.0	3.6	chr2	43457999	43458026	(198735503)	+	(AAAAC)n	Simple_repeat	1	28	(0)	1977531
292	8.9	0.0	2.2	chr2	43491347	43491392	(198702137)	C	MADE1	DNA/TcMar-Mariner	(0)	80	36	1977580
2052	25.0	12.0	4.3	chr2	43736834	43737397	(198456132)	+	L1MEc	LINE/L1	353	973	(5427)	1977986
1513	25.8	11.5	3.2	chr2	43737398	43737898	(198455631)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	1977988
2779	18.9	6.1	1.5	chr2	44548439	44549033	(197644496)	+	MLT1E3	LTR/ERVL-MaLR	1	624	(0)	1979390
17	25.1	5.1	2.4	chr2	45009363	45009441	(197184088)	+	(CGCT)n	Simple_repeat	1	83	(0)	1980088
201	15.2	0.0	0.0	chr2	45120009	45120041	(197073488)	+	L2b	LINE/L2	3341	3373	(2)	1980261
469	33.3	2.5	2.5	chr2	45128617	45128779	(197064750)	+	MER91A	DNA/hAT-Tip100	5	167	(29)	1980278
2256	26.1	12.6	15.4	chr2	45128780	45129476	(197064053)	+	L2	LINE/L2	992	1737	(1682)	1980277
401	27.5	7.2	1.3	chr2	45173497	45173678	(197019851)	C	MIR3	SINE/MIR	(6)	202	19	1980328
1761	18.2	2.7	6.1	chr2	45353633	45354115	(196839414)	C	MER4CL34	LTR/ERV1	(0)	765	1	1980595
196	39.0	3.1	0.0	chr2	45939150	45939244	(196254285)	+	MIRc	SINE/MIR	168	265	(3)	1981512
17	8.7	2.3	6.8	chr2	46335029	46335071	(195858458)	+	(CTCTTTC)n	Simple_repeat	1	44	(0)	1982098
2090	18.8	9.1	3.3	chr2	46690569	46691242	(195502287)	C	Tigger7	DNA/TcMar-Tigger	(0)	705	10	1982655
352	21.3	1.8	8.5	chr2	46804426	46804543	(195388986)	C	L4_C_Mam	LINE/RTE-X	(0)	5138	5029	1982824
258	20.7	9.3	0.6	chr2	46804601	46804679	(195388850)	C	MIR3	SINE/MIR	(45)	163	74	1982825
1135	16.4	10.6	1.6	chr2	46804680	46804927	(195388602)	+	ORSL	DNA/hAT-Tip100	1	273	(2)	1982826
1715	17.5	1.1	0.0	chr2	46806847	46807120	(195386409)	+	AluJb	SINE/Alu	11	287	(25)	1982830
331	30.6	10.6	1.8	chr2	46847188	46847350	(195346179)	C	MIR3	SINE/MIR	(27)	181	3	1982926
18	12.0	0.0	0.0	chr2	46855217	46855243	(195338286)	+	(TC)n	Simple_repeat	1	27	(0)	1982940
60	0.0	0.0	0.0	chr2	46855244	46855294	(195338235)	+	(CA)n	Simple_repeat	1	51	(0)	1982941
203	25.0	2.0	0.0	chr2	47269967	47270014	(194923515)	+	L2c	LINE/L2	3339	3387	(0)	1983682
234	24.5	11.3	12.1	chr2	47270194	47270309	(194923220)	+	L2c	LINE/L2	3268	3382	(5)	1983683
18	0.0	0.0	0.0	chr2	47906067	47906089	(194287440)	+	(GCG)n	Simple_repeat	1	23	(0)	1985044
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
18	14.2	10.6	0.0	chr2	47906280	47906326	(194287203)	+	(TC)n	Simple_repeat	1	52	(0)	1985046
230	26.4	10.2	2.8	chr2	48107002	48107110	(194086419)	C	MIR3	SINE/MIR	(58)	150	33	1985376
32	2.7	2.6	0.0	chr2	53787126	53787163	(188406366)	+	(CCT)n	Simple_repeat	1	39	(0)	1993127
879	22.8	0.0	0.0	chr2	54531426	54531587	(187661942)	C	AluJo	SINE/Alu	(14)	298	137	1994521
18	8.5	0.0	0.0	chr2	54531596	54531620	(187661909)	+	(T)n	Simple_repeat	1	25	(0)	1994522
2573	16.4	11.2	1.0	chr2	54532856	54533349	(187660180)	C	Tigger7	DNA/TcMar-Tigger	(1937)	554	4	1994527
54	0.0	0.0	0.0	chr2	54533350	54533395	(187660134)	+	(GT)n	Simple_repeat	1	46	(0)	1994528
207	38.7	0.0	1.3	chr2	54904083	54904158	(187289371)	C	L2c	LINE/L2	(43)	3344	3270	1995006
188	20.5	0.0	0.0	chr2	55051353	55051391	(187142138)	+	UCON80_AMi	Unknown	72	110	(112)	1995183
215	22.5	17.5	0.0	chr2	55051554	55051633	(187141896)	C	L2c	LINE/L2	(9)	3378	3282	1995184
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
915	20.1	4.2	0.5	chr2	55618638	55618821	(186574708)	C	AluSc8	SINE/Alu	(9)	302	112	1996249
2161	21.8	1.4	3.2	chr2	55779679	55780208	(186413321)	+	MER44B	DNA/TcMar-Tigger	1	520	(30)	1996579
265	30.5	0.0	0.0	chr2	56522758	56522816	(185670713)	+	L2b	LINE/L2	3314	3372	(3)	1997513
13316	18.5	2.8	2.6	chr2	56577552	56581329	(185612200)	+	L1MA4A	LINE/L1	3486	7268	(4)	1997584
369	30.5	1.9	1.9	chr2	56681159	56681265	(185512264)	+	MIR3	SINE/MIR	36	142	(66)	1997700
493	33.0	5.6	2.2	chr2	56687385	56687660	(185505869)	C	MER103C	DNA/hAT-Charlie	(11)	286	1	1997706
2057	33.3	9.9	5.3	chr2	57443734	57445452	(184748077)	+	ERVL-B4-int	LTR/ERVL	2675	4654	(1060)	1998561
265	9.2	1.5	6.4	chr2	58136761	58137284	(184056245)	+	(AT)n	Simple_repeat	1	532	(0)	1999403
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
16	16.8	7.3	1.7	chr2	61177366	61177378	(181016151)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	2003842
19	11.6	0.0	4.9	chr2	61177379	61177419	(181016110)	+	G-rich	Low_complexity	1	41	(0)	2003843
495	29.8	7.0	0.0	chr2	61255482	61255639	(180937890)	+	MIR	SINE/MIR	91	260	(2)	2003970
1304	18.5	8.0	0.0	chr2	61255666	61255908	(180937621)	+	Tigger7	DNA/TcMar-Tigger	82	345	(2146)	2003971
741	14.7	2.9	1.4	chr2	61255903	61256040	(180937489)	+	Tigger7	DNA/TcMar-Tigger	2343	2482	(9)	2003972
856	22.2	9.0	1.1	chr2	63741732	63742018	(178451511)	C	HAL1b	LINE/L1	(56)	2365	2054	2008258
42	15.1	4.3	1.0	chr2	63742220	63742312	(178451217)	+	GA-rich	Low_complexity	1	97	(0)	2008259
489	30.5	7.8	4.3	chr2	63984331	63984563	(178208966)	+	MIR	SINE/MIR	2	243	(19)	2008634
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
15	29.0	1.7	1.6	chr2	64770853	64770912	(177422617)	+	(CAG)n	Simple_repeat	1	61	(0)	2009908
906	21.5	5.8	4.6	chr2	64771136	64771374	(177422155)	+	MIR	SINE/MIR	1	242	(20)	2009909
434	31.9	11.4	3.1	chr2	65455888	65456430	(176737099)	+	L2	LINE/L2	2174	2767	(652)	2011272
15	0.0	0.0	0.0	chr2	67917377	67917393	(174276136)	+	(AC)n	Simple_repeat	1	17	(0)	2014749
203	28.3	9.6	1.7	chr2	68028329	68028443	(174165086)	C	MIRc	SINE/MIR	(121)	147	23	2014927
1053	26.1	7.5	4.2	chr2	68043942	68044341	(174149188)	+	L2a	LINE/L2	3012	3425	(1)	2014947
2459	6.6	0.0	0.0	chr2	68044449	68044735	(174148794)	+	AluY	SINE/Alu	23	309	(2)	2014948
528	25.3	5.9	5.1	chr2	69162998	69163093	(173030436)	C	Tigger9b	DNA/TcMar-Tigger	(144)	480	382	2016613
257	30.3	5.4	4.7	chr2	69216995	69217122	(172976407)	C	CR1-16_AMi	LINE/CR1	(490)	361	233	2016698
363	31.7	0.0	0.0	chr2	69217131	69217234	(172976295)	C	L3	LINE/CR1	(1259)	2840	2737	2016699
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
320	23.5	8.4	2.0	chr2	70190408	70190507	(172003022)	C	MIRb	SINE/MIR	(43)	225	119	2018609
2549	4.7	0.0	0.3	chr2	70293949	70294246	(171899283)	C	AluY	SINE/Alu	(14)	297	1	2018819
6288	14.0	1.4	1.3	chr2	71821868	71823443	(170370086)	C	L1MA6	LINE/L1	(0)	6300	4892	2021188
846	15.9	2.3	7.1	chr2	74199378	74199580	(167993949)	+	L1MB3	LINE/L1	5950	6143	(40)	2024987
354	28.0	4.7	10.1	chr2	74454680	74454836	(167738693)	+	L2c	LINE/L2	3208	3385	(2)	2025425
264	34.0	9.2	9.2	chr2	75100383	75100739	(167092790)	+	L2c	LINE/L2	3031	3387	(0)	2026487
1073	35.7	2.8	0.8	chr2	75375202	75375693	(166817836)	+	ERVL-E-int	LTR/ERVL	3105	3606	(2061)	2026863
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
2392	22.3	7.0	3.0	chr2	85106544	85107106	(157086423)	C	L1MC5a	LINE/L1	(2030)	747	162	2040119
2262	9.2	1.3	0.0	chr2	85107107	85107235	(157086294)	+	AluSz	SINE/Alu	1	129	(183)	2040120
49	0.0	0.0	0.0	chr2	85107236	85107280	(157086249)	+	(AAAAT)n	Simple_repeat	1	45	(0)	2040121
200	34.3	2.7	1.8	chr2	85504952	85505061	(156688468)	+	MIR3	SINE/MIR	92	202	(6)	2040923
1116	19.1	2.1	0.0	chr2	85505267	85505454	(156688075)	+	AluJb	SINE/Alu	121	312	(0)	2040924
16	14.2	0.0	0.0	chr2	85612145	85612175	(156581354)	+	(TCGGG)n	Simple_repeat	1	31	(0)	2041126
19	14.4	0.0	0.0	chr2	85612207	85612237	(156581292)	+	(T)n	Simple_repeat	1	31	(0)	2041127
18	11.6	0.0	4.9	chr2	85616281	85616321	(156577208)	+	G-rich	Low_complexity	1	41	(0)	2041141
53	0.0	0.0	0.0	chr2	85742721	85742765	(156450764)	+	(TG)n	Simple_repeat	1	45	(0)	2041418
229	20.0	6.2	0.0	chr2	85935886	85935945	(156257584)	C	REP522	Satellite/telo	(434)	1383	1320	2041779
1128	17.1	16.6	0.0	chr2	85935997	85936247	(156257282)	+	LTR64	LTR/ERV1	220	520	(8)	2041780
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
18	22.1	2.1	0.0	chr2	96266002	96266048	(145927481)	+	(TCC)n	Simple_repeat	1	48	(0)	2051857
13	20.9	5.0	0.0	chr2	96532300	96532339	(145661190)	+	(TTCT)n	Simple_repeat	1	42	(0)	2052303
769	20.0	4.1	2.1	chr2	98608861	98609049	(143584480)	C	MER53	DNA/hAT	(0)	193	1	2055213
34	3.0	0.0	0.0	chr2	99882056	99882089	(142311440)	+	(TC)n	Simple_repeat	1	34	(0)	2057106
259	25.3	1.1	2.2	chr2	100291021	100291109	(141902420)	+	L1MCc	LINE/L1	72	159	(6264)	2057668
259	27.0	10.8	6.3	chr2	100291130	100291287	(141902242)	+	L1MCc	LINE/L1	224	389	(6034)	2057668
229	31.8	10.2	0.0	chr2	100291934	100292021	(141901508)	C	MIRb	SINE/MIR	(137)	131	34	2057669
320	25.3	9.6	6.8	chr2	100292303	100292463	(141901066)	C	L1MCc	LINE/L1	(6034)	389	224	2057670
363	32.7	2.4	4.6	chr2	100742286	100742458	(141451071)	+	L2a	LINE/L2	3257	3425	(1)	2058435
244	25.8	3.1	6.1	chr2	100752737	100752835	(141440694)	C	L2c	LINE/L2	(1)	3386	3291	2058456
752	31.0	0.8	0.0	chr2	100752909	100753140	(141440389)	C	MIRb	SINE/MIR	(13)	255	22	2058457
249	32.5	3.5	1.2	chr2	100767307	100767390	(141426139)	C	L2b	LINE/L2	(0)	3375	3290	2058482
14	13.6	4.5	4.3	chr2	100819224	100819267	(141374262)	+	GA-rich	Low_complexity	1	46	(0)	2058572
13	32.2	0.0	4.0	chr2	100819428	100819501	(141374028)	+	(CCCCCGC)n	Simple_repeat	1	74	(0)	2058573
827	22.5	0.6	0.0	chr2	100921558	100921730	(141271799)	+	L1ME1	LINE/L1	5279	5452	(712)	2058735
1809	24.1	11.1	0.9	chr2	100921760	100922283	(141271246)	+	L1ME1	LINE/L1	5576	6159	(20)	2058735
186	21.6	2.6	0.0	chr2	101002432	101002468	(141191061)	C	L3b	LINE/CR1	(101)	5131	5094	2058833
230	22.3	6.0	6.0	chr2	101252168	101252267	(140941262)	+	L1ME3	LINE/L1	5863	5962	(200)	2059266
824	15.2	8.6	0.0	chr2	101252312	101252449	(140941080)	C	AluJr	SINE/Alu	(25)	287	137	2059270
18	18.6	0.0	5.6	chr2	101252681	101252734	(140940795)	+	(CGCCC)n	Simple_repeat	1	54	(0)	2059271
476	28.7	8.8	3.0	chr2	101399921	101400106	(140793423)	+	MIR	SINE/MIR	13	219	(49)	2059531
1997	16.2	7.9	4.7	chr2	101400213	101400677	(140792852)	+	MER31A	LTR/ERV1	1	481	(4)	2059532
12	13.9	6.2	0.0	chr2	101447051	101447082	(140746447)	+	(TGAGTT)n	Simple_repeat	1	34	(0)	2059600
20	0.0	0.0	0.0	chr2	101518030	101518051	(140675478)	+	(A)n	Simple_repeat	1	22	(0)	2059730
25	18.6	0.0	0.0	chr2	101518092	101518136	(140675393)	+	(T)n	Simple_repeat	1	45	(0)	2059731
18	26.3	0.0	0.0	chr2	102227797	102227847	(139965682)	+	(TCTC)n	Simple_repeat	1	51	(0)	2060808
195	36.5	12.4	2.5	chr2	106990607	106990766	(135202763)	+	L3b	LINE/CR1	5028	5205	(27)	2067272
1305	26.0	7.7	1.6	chr2	108413332	108413781	(133779748)	+	MLT1J1-int	LTR/ERVL-MaLR	903	1382	(5)	2069204
202	27.4	13.1	3.4	chr2	108594365	108594481	(133599048)	C	MIRb	SINE/MIR	(11)	251	122	2069502
735	28.1	15.6	6.3	chr2	109125407	109125771	(133067758)	C	L3	LINE/CR1	(335)	3764	3360	2070326
827	28.8	6.1	6.1	chr2	109125883	109126211	(133067318)	+	MER102b	DNA/hAT-Charlie	1	329	(12)	2070327
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
416	22.8	4.2	0.9	chr2	111699086	111699200	(130494329)	C	L1ME4a	LINE/L1	(205)	5919	5801	2073889
267	21.8	8.2	3.7	chr2	111918750	111918830	(130274699)	C	MIRb	SINE/MIR	(0)	268	184	2074254
329	8.5	1.5	3.4	chr2	113602929	113603477	(128590052)	+	(CTAACC)n	Simple_repeat	1	557	(0)	2077037
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
1909	16.1	4.8	0.2	chr2	113760255	113760688	(128432841)	C	MER89	LTR/ERV1	(4)	555	1	2077277
2355	11.2	0.0	0.3	chr2	113760871	113761183	(128432346)	C	AluSz	SINE/Alu	(0)	312	1	2077278
2376	19.1	7.4	3.0	chr2	117980673	117981185	(124212344)	C	L1MB7	LINE/L1	(2)	6182	5654	2082986
408	18.8	0.0	3.4	chr2	117981206	117981293	(124212236)	+	L2a	LINE/L2	3341	3425	(1)	2082987
420	23.1	2.1	0.0	chr2	119255815	119255905	(122937624)	C	L2a	LINE/L2	(0)	3426	3334	2085005
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
281	29.4	10.9	3.6	chr2	121480822	121481100	(120712429)	+	MLT1K	LTR/ERVL-MaLR	289	590	(5)	2088745
43	25.2	5.0	3.3	chr2	127407870	127408069	(114785460)	+	(CCTCCT)n	Simple_repeat	1	210	(0)	2097395
1922	14.3	8.7	0.7	chr2	127527075	127527554	(114665975)	+	MER92C	LTR/ERV1	8	590	(0)	2097595
14	17.6	0.0	0.0	chr2	128301657	128301688	(113891841)	+	(TGAGCG)n	Simple_repeat	1	32	(0)	2099017
399	15.1	1.4	2.7	chr2	132438631	132438705	(109754824)	+	MER58B	DNA/hAT-Charlie	263	336	(5)	2104604
218	31.0	2.5	12.1	chr2	133718655	133718786	(108474743)	+	L2b	LINE/L2	3237	3355	(20)	2106337
36	0.0	0.0	0.0	chr2	133718924	133718954	(108474575)	+	(AC)n	Simple_repeat	1	31	(0)	2106338
202	24.1	10.0	5.3	chr2	133787376	133787489	(108406040)	C	MIR3	SINE/MIR	(49)	159	40	2106465
6069	14.1	2.3	2.4	chr2	133816682	133817995	(108375534)	+	L1MA4A	LINE/L1	6046	7361	(4)	2106497
572	25.5	7.9	4.1	chr2	134177284	134177549	(108015980)	C	MLT1J1	LTR/ERVL-MaLR	(153)	291	15	2107053
15	18.3	0.0	2.6	chr2	135531567	135531621	(106661908)	+	(CCCGC)n	Simple_repeat	1	53	(0)	2109150
17	15.5	4.7	0.0	chr2	135531859	135531901	(106661628)	+	(GGCTGC)n	Simple_repeat	1	45	(0)	2109151
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
1040	25.0	8.2	5.8	chr2	137928446	137928856	(104264673)	+	MLT1C	LTR/ERVL-MaLR	47	467	(0)	2112731
204	36.1	15.5	1.8	chr2	137968884	137969662	(104223867)	+	L2	LINE/L2	1803	2707	(712)	2112795
23	18.2	2.0	0.0	chr2	138060458	138060507	(104133022)	+	(CAT)n	Simple_repeat	1	51	(0)	2112925
13	15.5	3.3	0.0	chr2	141341449	141341478	(100852051)	+	(TCTC)n	Simple_repeat	1	31	(0)	2117368
578	28.8	7.5	1.0	chr2	141341564	141341763	(100851766)	+	MLT1J2	LTR/ERVL-MaLR	8	221	(227)	2117369
230	35.9	10.4	1.8	chr2	145007364	145007590	(97185939)	C	MER130	DNA	(64)	1530	1282	2122115
367	36.7	8.1	3.2	chr2	145123800	145124047	(97069482)	+	Charlie17b	DNA/hAT-Charlie	173	433	(771)	2122277
356	31.0	2.3	2.3	chr2	145984656	145984787	(96208742)	+	LTR104_Mam	LTR/Gypsy	88	219	(1290)	2123333
282	33.5	5.0	3.3	chr2	146239664	146240003	(95953526)	C	CR1-L3A_Croc	LINE/CR1	(346)	3942	3800	2123666
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
275	38.0	4.5	0.8	chr2	149144034	149144163	(93049366)	C	L2b	LINE/L2	(0)	3375	3241	2127670
243	32.2	10.6	1.9	chr2	150191541	150191695	(92001834)	C	L1M7	LINE/L1	(6043)	200	31	2129017
1281	21.9	7.0	7.0	chr2	152200586	152201041	(89992488)	+	LTR16A1	LTR/ERVL	1	456	(0)	2132031
268	26.8	11.1	4.3	chr2	152573458	152573574	(89619955)	+	MIR3	SINE/MIR	38	163	(45)	2132633
180	25.9	1.8	1.8	chr2	152586428	152586482	(89607047)	+	Tigger19b	DNA/TcMar-Tigger	300	354	(196)	2132652
657	1.4	0.0	0.0	chr2	156401147	156401217	(85792312)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	2137396
1132	26.7	8.3	7.4	chr2	157036092	157036783	(85156746)	+	L1MEf	LINE/L1	4762	5460	(1481)	2138234
643	27.3	9.1	9.1	chr2	157037088	157037361	(85156168)	C	LTR33B	LTR/ERVL	(2)	501	228	2138241
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
409	25.0	3.9	1.6	chr2	160388060	160388185	(81805344)	C	X7C_LINE	LINE/CR1	(7)	229	101	2143002
182	40.0	4.1	0.0	chr2	160388201	160388270	(81805259)	+	L3	LINE/CR1	3938	4010	(89)	2143003
213	30.2	0.0	1.6	chr2	160388363	160388426	(81805103)	C	MER5A	DNA/hAT-Charlie	(106)	83	21	2143004
955	21.1	3.9	2.5	chr2	160747601	160747804	(81445725)	+	MER20	DNA/hAT-Charlie	13	219	(0)	2143517
378	42.0	1.9	3.6	chr2	160747841	160748205	(81445324)	+	LFSINE_Vert	SINE/tRNA	101	459	(0)	2143518
510	29.2	10.6	7.2	chr2	160836499	160836871	(81356658)	+	L2c	LINE/L2	2936	3322	(65)	2143598
19	24.4	3.4	4.3	chr2	161160246	161160334	(81033195)	+	(GGCAG)n	Simple_repeat	1	92	(0)	2144048
15927	16.9	4.6	1.4	chr2	162084547	162087396	(80106133)	C	MER34-int	LTR/ERV1	(0)	8207	5265	2145211
14	11.9	8.1	0.0	chr2	162344146	162344182	(79849347)	+	(CCTGCA)n	Simple_repeat	1	40	(0)	2145594
4432	10.8	5.4	2.7	chr2	164541939	164543010	(77650519)	+	L1PA16	LINE/L1	4651	5778	(388)	2148417
3394	17.7	7.4	0.4	chr2	166411127	166411808	(75781721)	+	MER44C	DNA/TcMar-Tigger	1	733	(0)	2150984
298	33.5	4.9	12.9	chr2	166593457	166593836	(75599693)	+	L2c	LINE/L2	3040	3387	(0)	2151215
209	35.1	9.7	7.6	chr2	166651306	166651567	(75541962)	+	MamRTE1	LINE/RTE-BovB	3366	3633	(179)	2151268
2025	18.8	14.0	0.8	chr2	167134574	167135050	(75058479)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	2151840
12	11.6	6.9	0.0	chr2	168211221	168211249	(73982280)	+	(ATCTC)n	Simple_repeat	1	31	(0)	2153224
16	11.2	0.0	3.2	chr2	169827510	169827540	(72365989)	+	(GGC)n	Simple_repeat	1	31	(0)	2155681
328	34.2	2.6	2.0	chr2	170843708	170843859	(71349670)	C	Plat_L3	LINE/CR1	(13)	3573	3421	2157338
30	5.6	0.0	0.0	chr2	171160967	171161003	(71032526)	+	(GCG)n	Simple_repeat	1	37	(0)	2157913
838	24.5	1.9	3.3	chr2	172178114	172178324	(70015205)	C	MLT1K	LTR/ERVL-MaLR	(3)	592	385	2159757
363	31.4	9.5	5.5	chr2	172178402	172178654	(70014875)	C	MLT1K	LTR/ERVL-MaLR	(331)	264	1	2159757
33	5.6	0.0	0.0	chr2	172253373	172253409	(69940120)	+	(CA)n	Simple_repeat	1	37	(0)	2159875
850	23.5	5.2	1.4	chr2	172693317	172693536	(69499993)	+	MIR	SINE/MIR	1	229	(33)	2160545
1909	12.1	4.4	2.1	chr2	173184627	173184916	(69008613)	+	AluSz6	SINE/Alu	1	297	(15)	2161261
1741	15.9	7.7	1.0	chr2	177241577	177241866	(64951663)	+	AluJr	SINE/Alu	2	312	(0)	2167325
1954	15.6	0.3	1.6	chr2	177397747	177398054	(64795475)	+	AluJb	SINE/Alu	2	305	(7)	2167606
6415	13.2	3.7	2.9	chr2	179454181	179455268	(62738261)	+	Tigger3b	DNA/TcMar-Tigger	1	1097	(134)	2170190
2522	10.5	0.0	5.1	chr2	179455269	179455608	(62737921)	+	THE1C	LTR/ERVL-MaLR	3	328	(47)	2170191
4593	14.0	6.0	0.5	chr2	179460227	179461001	(62732528)	+	LTR8B	LTR/ERV1	1	820	(0)	2170205
332	27.3	15.7	3.2	chr2	179701380	179701534	(62491995)	C	MIR	SINE/MIR	(0)	262	85	2170535
6318	18.6	3.1	0.5	chr2	180039653	180041697	(62151832)	C	L1MB8	LINE/L1	(5)	6173	4069	2170983
54	3.7	0.0	0.0	chr2	182066941	182066995	(60126534)	+	(TG)n	Simple_repeat	1	55	(0)	2173478
196	35.6	5.2	6.4	chr2	186544521	186544676	(55648853)	C	MamTip2	DNA/hAT-Tip100	(151)	154	1	2179198
5201	13.1	2.3	1.3	chr2	187774121	187775492	(54418037)	+	L1PA16	LINE/L1	4787	6166	(0)	2180775
338	33.6	4.4	2.2	chr2	188199587	188199720	(53993809)	C	MIR3	SINE/MIR	(58)	150	14	2181337
985	31.5	8.9	4.9	chr2	188199924	188200417	(53993112)	+	L2a	LINE/L2	2911	3426	(0)	2181338
1079	31.5	8.6	4.6	chr2	188475919	188476444	(53717085)	C	L2	LINE/L2	(2859)	560	12	2181689
13	21.4	6.5	6.1	chr2	188976005	188976096	(53217433)	+	(CTCCTTC)n	Simple_repeat	1	98	(0)	2182260
18	0.0	0.0	0.0	chr2	188978757	188978776	(53214753)	+	(A)n	Simple_repeat	1	20	(0)	2182263
14	22.7	0.0	0.0	chr2	189002007	189002042	(53191487)	+	(ATAT)n	Simple_repeat	1	36	(0)	2182278
1616	24.0	3.2	5.6	chr2	189013965	189014480	(53179049)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	2182294
2029	32.6	9.6	4.3	chr2	189297852	189298801	(52894728)	C	LTR78B	LTR/ERV1	(34)	1262	257	2182660
210	32.5	2.4	1.2	chr2	189762931	189763011	(52430518)	C	MIRb	SINE/MIR	(151)	117	36	2183331
2567	5.8	0.3	0.3	chr2	190378350	190378658	(51814871)	C	AluY	SINE/Alu	(2)	309	1	2184271
234	44.1	0.8	0.8	chr2	190819987	190820114	(51373415)	C	MamTip2	DNA/hAT-Tip100	(154)	151	24	2184955
737	21.6	1.2	0.6	chr2	190838412	190838574	(51354955)	C	Charlie10b	DNA/hAT-Charlie	(78)	164	1	2184995
673	26.0	10.4	6.7	chr2	190838721	190838978	(51354551)	C	MLT1H	LTR/ERVL-MaLR	(85)	464	184	2184996
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
1305	33.7	8.8	4.8	chr2	191333969	191334743	(50858786)	C	L3	LINE/CR1	(3133)	966	158	2185702
271	35.8	0.3	0.3	chr2	191894997	191895114	(50298415)	C	L2a	LINE/L2	(9)	3417	3249	2186545
1275	23.0	7.7	4.9	chr2	191927395	191927901	(50265628)	C	CR1_Mam	LINE/CR1	(1148)	1056	535	2186590
5835	11.1	3.9	0.3	chr2	195477118	195478070	(46715459)	C	L1PA16	LINE/L1	(9)	6157	5170	2190954
289	33.5	11.1	7.5	chr2	195613993	195614192	(46579337)	C	MamSINE1	SINE/tRNA-RTE	(6)	284	77	2191194
225	28.9	0.0	0.0	chr2	195614188	195614239	(46579290)	+	L2a	LINE/L2	3364	3415	(11)	2191195
606	36.7	3.7	3.0	chr2	196293700	196294103	(45899426)	C	MamRep137	DNA/TcMar-Tigger	(102)	408	2	2192181
2590	4.4	0.3	0.0	chr2	196799959	196800252	(45393277)	C	AluSc8	SINE/Alu	(16)	295	1	2192924
428	30.3	11.3	2.5	chr2	197360563	197360764	(44832765)	+	MIRb	SINE/MIR	33	252	(16)	2193862
13	0.0	0.0	0.0	chr2	197804607	197804623	(44388906)	+	(GCC)n	Simple_repeat	1	17	(0)	2194616
1077	27.6	9.2	0.3	chr2	197969625	197969998	(44223531)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	2194850
761	31.8	4.1	3.4	chr2	198072168	198072860	(44120669)	C	L1ME3Cz	LINE/L1	(1693)	4453	3765	2194993
314	29.8	10.8	0.7	chr2	198072933	198073074	(44120455)	C	MIRc	SINE/MIR	(39)	229	72	2194995
33508	17.0	0.9	1.0	chr2	199224101	199230083	(42963446)	C	HERVL18-int	LTR/ERVL	(0)	6047	1	2196571
17	17.8	4.4	0.0	chr2	199459312	199459358	(42734171)	+	(GCCGCCG)n	Simple_repeat	1	49	(0)	2196851
268	27.8	9.1	15.1	chr2	200406058	200406163	(41787366)	C	L2a	LINE/L2	(2)	3424	3287	2198284
2651	20.4	10.0	2.2	chr2	200765523	200766193	(41427336)	C	MER21C	LTR/ERVL	(88)	850	122	2198810
250	27.2	6.7	2.3	chr2	200778420	200778547	(41414982)	+	MIR3	SINE/MIR	1	134	(74)	2198830
369	24.6	22.1	0.0	chr2	200889717	200889903	(41303626)	C	MIR	SINE/MIR	(21)	241	2	2199072
382	14.2	4.1	2.4	chr2	201232110	201232223	(40961306)	C	LTR41C	LTR/ERVL	(6)	752	609	2199793
825	20.3	12.5	5.8	chr2	201232239	201232551	(40960978)	C	LTR41C	LTR/ERVL	(364)	337	1	2199793
922	22.6	0.4	12.7	chr2	201431759	201432042	(40761487)	+	MIR	SINE/MIR	14	262	(0)	2200043
16	10.8	3.3	0.0	chr2	201432062	201432091	(40761438)	+	(TAT)n	Simple_repeat	1	31	(0)	2200044
1379	32.5	8.1	13.0	chr2	201531393	201532880	(40660649)	C	L2a	LINE/L2	(47)	3379	1967	2200186
1139	28.7	11.0	3.2	chr2	201532883	201533711	(40659818)	+	MLT1H2-int	LTR/ERVL-MaLR	547	1392	(17)	2200187
1232	29.6	10.2	8.9	chr2	201652485	201653515	(40540014)	C	LTR78	LTR/ERV1	(134)	1170	131	2200372
3272	14.6	4.0	2.2	chr2	201797969	201798508	(40395021)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	2200600
294	32.8	6.6	0.9	chr2	202135734	202135840	(40057689)	+	MamRTE1	LINE/RTE-BovB	3329	3442	(370)	2201280
2370	7.8	0.0	3.1	chr2	202265464	202265588	(39927941)	+	AluSc	SINE/Alu	194	309	(0)	2201570
527	27.0	1.7	3.3	chr2	203807876	203808055	(38385474)	+	MER5B	DNA/hAT-Charlie	2	178	(0)	2204683
251	27.9	5.0	5.0	chr2	203811620	203811800	(38381729)	C	L2	LINE/L2	(2409)	1010	830	2204694
1029	26.1	2.2	2.5	chr2	205386123	205386401	(36807128)	C	MamSINE1	SINE/tRNA-RTE	(0)	290	13	2206874
1071	17.3	1.8	6.1	chr2	205405185	205405412	(36788117)	+	MER20	DNA/hAT-Charlie	1	218	(1)	2206897
375	34.6	8.5	8.0	chr2	205405413	205405733	(36787796)	+	L3	LINE/CR1	2944	3269	(830)	2206896
16	24.0	0.0	0.0	chr2	207166018	207166052	(35027477)	+	(C)n	Simple_repeat	1	35	(0)	2209618
15	27.2	0.0	0.0	chr2	207166071	207166112	(35027417)	+	(TCC)n	Simple_repeat	1	42	(0)	2209619
2466	14.1	8.8	1.3	chr2	207394695	207395169	(34798360)	C	LTR44	LTR/ERV1	(5)	514	1	2209933
469	32.3	6.2	2.1	chr2	207395258	207395491	(34798038)	+	MLT1J2	LTR/ERVL-MaLR	201	444	(4)	2209934
221	38.1	9.4	4.3	chr2	207505953	207506114	(34687415)	C	MamTip2	DNA/hAT-Tip100	(95)	210	40	2210133
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
12	11.5	3.2	3.1	chr2	209369127	209369157	(32824372)	+	A-rich	Low_complexity	1	32	(0)	2212950
197	29.2	1.1	11.9	chr2	209496188	209496288	(32697241)	C	L2c	LINE/L2	(17)	3370	3281	2213106
245	29.7	9.9	1.7	chr2	210477360	210477479	(31716050)	C	L3b	LINE/CR1	(134)	5098	4968	2214396
457	26.5	1.4	7.0	chr2	212032289	212032446	(30161083)	+	UCON21	DNA?	76	224	(106)	2216405
1414	31.1	9.6	2.9	chr2	213995483	213996201	(28197328)	C	MamGypLTR1a	LTR/Gypsy	(10)	774	3	2218982
309	24.7	8.9	2.7	chr2	215609509	215609681	(26583848)	C	LTR86B1	LTR/ERVL	(204)	283	98	2221368
525	35.7	12.6	5.2	chr2	215692939	215693727	(26499802)	C	L2c	LINE/L2	(203)	3184	2331	2221491
21	4.2	0.0	0.0	chr2	215693752	215693776	(26499753)	+	(A)n	Simple_repeat	1	25	(0)	2221492
252	32.3	3.1	2.3	chr2	215693789	215693918	(26499611)	C	L2	LINE/L2	(499)	2920	2790	2221493
12	9.2	0.0	4.0	chr2	215751363	215751387	(26442142)	+	(TTCA)n	Simple_repeat	1	25	(0)	2221585
315	29.0	8.2	2.0	chr2	215843545	215843646	(26349883)	+	L2b	LINE/L2	3080	3188	(187)	2221720
4360	16.6	1.9	3.0	chr2	216114477	216115267	(26078262)	+	MER50C	LTR/ERV1	1	782	(0)	2222208
15	8.2	0.0	3.6	chr2	216115278	216115305	(26078224)	+	(TGTT)n	Simple_repeat	1	28	(0)	2222209
12	14.6	0.0	5.9	chr2	216115308	216115341	(26078188)	+	(AGAGTC)n	Simple_repeat	1	34	(0)	2222210
5320	11.3	3.6	2.2	chr2	216216681	216217581	(25975948)	C	MER49	LTR/ERV1	(9)	914	1	2222349
24	14.5	2.1	2.0	chr2	216373502	216373542	(25819987)	+	(CT)n	Simple_repeat	1	42	(0)	2222626
34	0.0	0.0	0.0	chr2	216373543	216373571	(25819958)	+	(CA)n	Simple_repeat	1	29	(0)	2222627
420	24.3	4.5	2.7	chr2	216426357	216426466	(25767063)	C	Charlie24	DNA/hAT-Charlie	(1)	2449	2338	2222732
1130	24.9	12.2	1.9	chr2	216555270	216555750	(25637779)	+	MLT1G1	LTR/ERVL-MaLR	1	575	(4)	2222968
801	19.3	0.7	0.0	chr2	216775375	216775509	(25418020)	C	FRAM	SINE/Alu	(39)	137	2	2223404
292	32.9	2.4	4.7	chr2	217105879	217106047	(25087482)	C	X2_LINE	LINE/CR1	(422)	986	822	2223925
4490	18.7	3.7	3.5	chr2	217223089	217224065	(24969464)	C	MER45B	DNA/hAT-Tip100	(61)	979	1	2224088
315	28.3	17.4	0.7	chr2	217277835	217277987	(24915542)	C	MIR3	SINE/MIR	(2)	206	23	2224160
16	5.3	0.0	0.0	chr2	217361121	217361140	(24832389)	+	(T)n	Simple_repeat	1	20	(0)	2224279
14	15.6	9.1	0.0	chr2	218003611	218003654	(24189875)	+	(TTTC)n	Simple_repeat	1	48	(0)	2225316
227	22.1	18.1	0.0	chr2	218287171	218287238	(23906291)	C	MIR3	SINE/MIR	(14)	194	112	2225773
14	7.2	0.0	8.6	chr2	218406515	218406549	(23786980)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2226047
24	8.0	2.5	0.0	chr2	219229565	219229604	(22963925)	+	(GGCTC)n	Simple_repeat	1	41	(0)	2227555
2713	18.5	3.0	2.1	chr2	219362473	219363002	(22830527)	C	MLT1F	LTR/ERVL-MaLR	(13)	535	1	2227785
234	33.8	6.1	3.3	chr2	220225328	220225460	(21968069)	C	MIRc	SINE/MIR	(122)	146	4	2229222
485	30.6	10.5	4.8	chr2	220225461	220225487	(21968042)	+	MIRb	SINE/MIR	100	128	(140)	2229223
2256	11.5	0.3	0.0	chr2	220225488	220225783	(21967746)	C	AluSc	SINE/Alu	(7)	302	6	2229224
535	29.6	6.7	5.7	chr2	220228332	220228909	(21964620)	C	MLT1H1	LTR/ERVL-MaLR	(3)	566	1	2229226
15	5.6	0.0	0.0	chr2	222707781	222707799	(19485730)	+	(TG)n	Simple_repeat	1	19	(0)	2233029
273	24.1	3.4	12.8	chr2	223460761	223460955	(18732574)	+	HAL1	LINE/L1	106	281	(2226)	2234260
328	26.1	6.7	4.3	chr2	223461085	223461200	(18732329)	+	HAL1	LINE/L1	499	617	(1890)	2234260
14	19.1	0.0	2.6	chr2	224086521	224086558	(18106971)	+	A-rich	Low_complexity	1	38	(0)	2235379
320	31.7	4.6	4.6	chr2	224102220	224102371	(18091158)	+	L3	LINE/CR1	1619	1770	(2329)	2235398
22	9.4	0.0	0.0	chr2	224585356	224585389	(17608140)	+	(TCC)n	Simple_repeat	1	34	(0)	2236171
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
469	29.1	1.4	6.2	chr2	225100844	225101067	(17092462)	C	L1MEf	LINE/L1	(6178)	245	33	2237020
227	21.7	3.2	0.0	chr2	225101210	225101269	(17092260)	+	HAL1	LINE/L1	2340	2401	(106)	2237022
309	24.7	1.1	3.3	chr2	226186207	226186298	(16007231)	+	Plat_L3	LINE/CR1	3259	3348	(238)	2238552
189	26.2	6.2	0.0	chr2	226187479	226187539	(16005990)	C	MamRTE1	LINE/RTE-BovB	(1720)	2092	2028	2238554
43	4.5	0.0	0.0	chr2	226187718	226187763	(16005766)	+	(CA)n	Simple_repeat	1	46	(0)	2238555
2496	8.9	0.0	0.0	chr2	226489537	226489840	(15703689)	C	AluY	SINE/Alu	(7)	304	1	2239004
197	29.9	3.3	11.4	chr2	226489866	226490031	(15703498)	C	MamTip2	DNA/hAT-Tip100	(73)	232	81	2239005
465	32.4	6.8	4.6	chr2	226673582	226673840	(15519689)	+	MIRc	SINE/MIR	4	268	(0)	2239288
274	28.0	1.3	0.0	chr2	227818607	227818681	(14374848)	+	MADE2	DNA/TcMar-Mariner	5	80	(0)	2241183
602	25.8	1.7	0.9	chr2	227818733	227818910	(14374619)	+	MER20B	DNA/hAT-Charlie	34	214	(5)	2241184
240	25.0	19.3	1.1	chr2	229455244	229455332	(12738197)	+	MIRc	SINE/MIR	39	147	(121)	2243562
724	30.3	1.6	3.5	chr2	229488885	229489144	(12704385)	C	MIR	SINE/MIR	(3)	259	10	2243604
336	27.1	5.3	2.8	chr2	230312701	230312916	(11880613)	+	LTR48	LTR/ERV1	1	281	(506)	2244991
1390	19.8	3.2	2.4	chr2	230312964	230313300	(11880229)	+	MER34C2	LTR/ERV1	216	555	(0)	2244992
333	26.7	12.8	5.1	chr2	231612938	231613095	(10580434)	C	MIR	SINE/MIR	(55)	213	42	2247264
1274	28.5	4.6	12.1	chr2	232988308	232989165	(9204364)	+	L1ME4b	LINE/L1	67	855	(37)	2249675
267	34.1	1.0	2.3	chr2	233413474	233413616	(8779913)	+	L2a	LINE/L2	3228	3422	(4)	2250499
269	30.6	13.1	1.2	chr2	233487227	233487466	(8706063)	+	L1M5	LINE/L1	5384	5652	(472)	2250574
1979	13.4	2.9	1.0	chr2	233488633	233488938	(8704591)	+	AluJr	SINE/Alu	1	312	(0)	2250576
31	7.2	2.3	0.0	chr2	233974870	233974913	(8218616)	+	(AG)n	Simple_repeat	1	45	(0)	2251204
14	14.2	3.2	0.0	chr2	233982655	233982685	(8210844)	+	A-rich	Low_complexity	1	32	(0)	2251217
542	28.2	3.1	1.1	chr2	234111712	234111893	(8081636)	+	MLT1F	LTR/ERVL-MaLR	2	191	(364)	2251388
775	26.5	3.7	7.1	chr2	234111894	234112398	(8081131)	C	L1MEc	LINE/L1	(3531)	2788	2343	2251389
1813	16.8	1.3	2.5	chr2	234203645	234203959	(7989570)	+	AluJb	SINE/Alu	1	311	(1)	2251563
292	18.8	0.0	0.0	chr2	234422422	234422469	(7771060)	+	Helitron1Nb_Mam	RC/Helitron	22	69	(1047)	2251952
1038	24.1	13.5	0.7	chr2	234422595	234423000	(7770529)	+	Helitron1Nb_Mam	RC/Helitron	107	572	(544)	2251952
357	26.0	3.4	15.5	chr2	234682603	234682802	(7510727)	C	MLT1H	LTR/ERVL-MaLR	(242)	307	133	2252368
343	26.3	10.0	0.0	chr2	234682736	234682834	(7510695)	C	MLT2E	LTR/ERVL	(487)	141	32	2252369
1123	23.4	7.5	0.7	chr2	234989545	234989854	(7203675)	C	MER58B	DNA/hAT-Charlie	(0)	341	9	2252884
15	19.4	0.0	2.6	chr2	235171672	235171684	(7021845)	+	(CT)n	Simple_repeat	1	13	(0)	2253147
33	5.6	0.0	0.0	chr2	235171685	235171721	(7021808)	+	(TG)n	Simple_repeat	1	37	(0)	2253148
15	19.4	0.0	2.6	chr2	235171722	235171745	(7021784)	+	(CT)n	Simple_repeat	2	24	(0)	2253149
435	27.5	9.6	3.4	chr2	235171808	235171954	(7021575)	C	MLT1M	LTR/ERVL-MaLR	(424)	248	92	2253150
16	16.2	2.2	4.3	chr2	237223229	237223303	(4970226)	+	(CACATG)n	Simple_repeat	1	73	(0)	2256099
1203	22.8	9.4	2.4	chr2	237223545	237223957	(4969572)	+	LTR16A1	LTR/ERVL	1	445	(11)	2256100
919	33.9	5.0	1.8	chr2	237227644	237228087	(4965442)	+	LTR16E2	LTR/ERVL	110	568	(0)	2256111
240	31.2	3.8	5.9	chr2	237280153	237280288	(4913241)	+	L3b	LINE/CR1	4418	4490	(742)	2256169
13	22.9	2.1	4.2	chr2	237291388	237291434	(4902095)	+	(TTCTC)n	Simple_repeat	1	48	(0)	2256186
13	25.4	0.0	5.7	chr2	237475331	237475383	(4718146)	+	G-rich	Low_complexity	1	53	(0)	2256409
653	32.8	9.4	2.2	chr2	237500528	237501060	(4692469)	+	L2b	LINE/L2	2319	2893	(526)	2256442
184	26.4	13.3	0.0	chr2	237501129	237501219	(4692310)	+	L2b	LINE/L2	3222	3326	(49)	2256442
295	25.6	3.3	0.4	chr2	237501280	237501380	(4692149)	C	MIR	SINE/MIR	(56)	212	112	2256444
773	25.6	5.5	1.1	chr2	238439668	238439928	(3753601)	C	L1MC4	LINE/L1	(532)	7510	7238	2257820
236	18.6	0.0	0.0	chr2	240387825	240387867	(1805662)	C	L3	LINE/CR1	(5)	4094	4052	2260003
12	20.4	5.6	3.5	chr2	241637639	241637692	(555837)	+	(GCGTC)n	Simple_repeat	1	57	(0)	2261473
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
335	29.0	11.2	1.1	chr20	1416082	1416266	(63027901)	+	L2c	LINE/L2	2963	3168	(219)	2264955
870	23.9	3.3	7.8	chr20	1813007	1813082	(62631085)	C	L2a	LINE/L2	(169)	3257	3168	2265646
413	29.9	1.8	0.9	chr20	1813053	1813160	(62631007)	+	MIRb	SINE/MIR	20	128	(140)	2265648
1285	25.2	10.3	2.7	chr20	1813200	1813230	(62630937)	C	L2a	LINE/L2	(3)	3423	3395	2265649
1963	13.7	0.3	5.1	chr20	1813231	1813543	(62630624)	+	AluSx	SINE/Alu	1	298	(14)	2265650
617	28.0	6.9	7.5	chr20	1816221	1816498	(62627669)	+	L2a	LINE/L2	3131	3406	(20)	2265655
396	30.9	6.8	0.7	chr20	1816574	1816710	(62627457)	+	MER117	DNA/hAT-Charlie	4	149	(48)	2265656
508	25.6	0.7	4.9	chr20	1830210	1830353	(62613814)	+	MIR3	SINE/MIR	45	182	(26)	2265688
315	30.7	10.5	2.8	chr20	1933918	1934058	(62510109)	C	L1ME4a	LINE/L1	(0)	6124	5972	2265938
564	9.3	22.4	0.0	chr20	2524794	2524890	(61919277)	C	FLAM_C	SINE/Alu	(15)	128	4	2267111
17	16.0	0.0	0.0	chr20	3470925	3470959	(60973208)	+	(CGCA)n	Simple_repeat	1	35	(0)	2268952
254	29.2	4.4	4.3	chr20	3820017	3820109	(60624058)	+	MER5A	DNA/hAT-Charlie	87	173	(5)	2269562
2222	19.0	7.1	1.4	chr20	4075634	4076741	(60367426)	C	L1MB5	LINE/L1	(3)	6747	5498	2270078
2876	13.5	2.5	0.2	chr20	4076742	4077165	(60367002)	+	LTR47B4	LTR/ERVL	1	434	(0)	2270079
288	31.4	5.2	5.7	chr20	4470601	4470868	(59973299)	+	MIRc	SINE/MIR	3	259	(3)	2270790
4385	11.4	2.2	5.7	chr20	4665723	4666438	(59777729)	+	LTR8	LTR/ERV1	2	691	(0)	2271108
1032	24.0	1.5	4.4	chr20	4666439	4666580	(59777587)	+	L1M6	LINE/L1	1427	1563	(4933)	2271107
26	20.3	4.4	5.9	chr20	5610705	5610818	(58833349)	+	(CCGGC)n	Simple_repeat	1	119	(0)	2272845
13	15.2	0.0	3.2	chr20	5611040	5611070	(58833097)	+	G-rich	Low_complexity	1	31	(0)	2272846
507	26.7	3.0	0.0	chr20	8291678	8291808	(56152359)	C	MIR	SINE/MIR	(22)	240	106	2277027
276	25.7	0.0	1.3	chr20	8291997	8292071	(56152096)	C	MamRep137	DNA/TcMar-Tigger	(19)	491	418	2277028
347	35.7	0.6	0.0	chr20	9051498	9051654	(55392513)	C	MLT1J1-int	LTR/ERVL-MaLR	(1229)	158	1	2278298
1241	30.1	6.6	1.7	chr20	9200265	9200876	(55243291)	+	L2a	LINE/L2	2574	3220	(206)	2278541
507	22.7	0.9	0.0	chr20	9552067	9552176	(54891991)	C	Charlie8	DNA/hAT-Charlie	(2243)	185	75	2279059
294	36.6	1.5	0.8	chr20	10115403	10115534	(54328633)	C	MamGypLTR1b	LTR/Gypsy	(68)	714	582	2280009
209	30.7	0.0	0.0	chr20	10511605	10511679	(53932488)	C	MIR	SINE/MIR	(59)	203	129	2280669
301	36.9	2.0	0.7	chr20	11118003	11118152	(53326015)	C	MER130	DNA	(1420)	174	23	2281558
24	3.6	0.0	0.0	chr20	11267661	11267689	(53176478)	+	(TG)n	Simple_repeat	1	29	(0)	2281735
13128	15.7	1.4	4.5	chr20	14996424	14999376	(49444791)	+	L1M1	LINE/L1	15	3211	(4354)	2287204
6199	10.1	1.0	0.6	chr20	15194972	15196265	(49247902)	+	L1PA11	LINE/L1	4879	6174	(0)	2287511
191	34.4	4.1	1.1	chr20	16459218	16459311	(47984856)	C	L2c	LINE/L2	(55)	3332	3236	2289379
17	17.8	1.7	6.8	chr20	17968482	17968539	(46475628)	+	(GCC)n	Simple_repeat	1	59	(0)	2291818
828	32.2	9.6	1.7	chr20	19828065	19828594	(44615573)	C	L3b	LINE/CR1	(1988)	2111	1536	2294692
307	32.9	8.9	2.0	chr20	19981019	19981164	(44463003)	C	MIRc	SINE/MIR	(5)	263	107	2294988
1129	21.9	4.5	1.4	chr20	19981263	19981564	(44462603)	C	L1MC3	LINE/L1	(436)	7349	7048	2294989
598	19.8	12.9	3.7	chr20	24672788	24672976	(39771191)	+	MER20	DNA/hAT-Charlie	11	219	(0)	2301188
2071	16.7	2.3	2.8	chr20	25136290	25136683	(39307484)	+	MSTD	LTR/ERVL-MaLR	1	392	(4)	2301754
1492	23.5	12.4	0.2	chr20	25136684	25136995	(39307172)	C	MLT1F	LTR/ERVL-MaLR	(141)	407	54	2301753
1333	9.2	1.7	0.0	chr20	26009529	26009702	(38434465)	C	AluSx1	SINE/Alu	(22)	290	114	2303099
571	24.4	0.0	0.0	chr20	29328168	29328282	(35115885)	C	AluJo	SINE/Alu	(197)	115	1	2304010
201	29.1	4.4	3.4	chr20	29328285	29328373	(35115794)	C	MER5A	DNA/hAT-Charlie	(70)	119	30	2304011
607	19.1	1.7	1.7	chr20	29765380	29765494	(34678673)	C	AluJo	SINE/Alu	(197)	115	1	2304530
16	20.9	0.0	0.0	chr20	30377144	30377176	(34066991)	+	(C)n	Simple_repeat	1	33	(0)	2304972
18	24.7	1.5	3.0	chr20	31486021	31486086	(32958081)	+	G-rich	Low_complexity	1	67	(0)	2306071
502	23.0	6.7	3.9	chr20	31486139	31486345	(32957822)	C	L2a	LINE/L2	(1)	3425	3171	2306072
201	35.1	10.5	0.0	chr20	31544531	31544624	(32899543)	C	MER5A	DNA/hAT-Charlie	(84)	105	1	2306228
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
675	27.6	12.7	2.8	chr20	31595638	31596028	(32848139)	C	L2a	LINE/L2	(31)	3395	2961	2306363
297	25.7	1.8	4.3	chr20	31608176	31608288	(32835879)	+	MIRb	SINE/MIR	149	262	(0)	2306396
12	18.1	3.1	0.0	chr20	31836254	31836285	(32607882)	+	(CCTG)n	Simple_repeat	1	33	(0)	2306987
323	18.8	13.5	0.0	chr20	31836448	31836543	(32607624)	C	MIR3	SINE/MIR	(72)	136	26	2306988
13	10.0	5.9	2.8	chr20	31880001	31880034	(32564133)	+	G-rich	Low_complexity	1	36	(0)	2307086
28	3.3	0.0	0.0	chr20	31880262	31880292	(32563875)	+	(TCCA)n	Simple_repeat	1	31	(0)	2307087
278	28.6	8.2	0.9	chr20	31880297	31880409	(32563758)	C	L2b	LINE/L2	(0)	3375	3254	2307088
1107	22.3	9.5	0.0	chr20	33803763	33804076	(30640091)	C	L1ME3	LINE/L1	(3)	6159	5813	2311653
21	26.9	2.1	4.1	chr20	33811326	33811395	(30632772)	+	(GCGGAG)n	Simple_repeat	1	69	(0)	2311672
33	2.8	0.0	0.0	chr20	33811396	33811431	(30632736)	+	(GAGCC)n	Simple_repeat	1	36	(0)	2311673
2204	10.3	3.0	0.3	chr20	34390761	34391052	(30053115)	C	AluSq2	SINE/Alu	(13)	300	1	2312994
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
410	20.2	12.6	0.9	chr20	34907982	34908086	(29536081)	+	MIRc	SINE/MIR	24	142	(126)	2314121
428	34.2	7.1	7.4	chr20	35232468	35232874	(29211293)	C	L2c	LINE/L2	(153)	3234	2809	2314832
300	32.0	9.1	9.3	chr20	35263265	35263726	(29180441)	+	L2b	LINE/L2	2924	3384	(3)	2314905
16	0.0	4.3	0.0	chr20	35284937	35284959	(29159208)	+	(TTCA)n	Simple_repeat	1	24	(0)	2314939
287	27.1	13.9	0.8	chr20	35339390	35339508	(29104659)	C	L2c	LINE/L2	(231)	3156	3020	2315040
2064	13.1	0.0	0.3	chr20	35814914	35815204	(28628963)	+	AluSx1	SINE/Alu	1	290	(22)	2316135
27	14.3	1.4	5.7	chr20	35815205	35815258	(28628909)	+	A-rich	Low_complexity	15	66	(0)	2316136
1392	17.5	0.0	4.8	chr20	35815296	35815459	(28628708)	+	AluSz	SINE/Alu	1	155	(157)	2316137
2260	10.2	0.0	1.0	chr20	35815460	35815763	(28628404)	C	AluSc8	SINE/Alu	(9)	302	2	2316138
595	25.9	3.1	5.7	chr20	37295344	37295572	(27148595)	C	MER112	DNA/hAT-Charlie	(32)	229	7	2319686
576	27.8	7.2	0.5	chr20	37295587	37295781	(27148386)	+	MIRb	SINE/MIR	23	231	(37)	2319687
20	20.1	6.3	0.0	chr20	37907634	37907653	(26536514)	+	(CCCA)n	Simple_repeat	1	65	(0)	2321026
26	13.3	0.0	0.0	chr20	37907654	37907694	(26536473)	+	(CA)n	Simple_repeat	1	41	(0)	2321027
405	28.9	4.9	1.9	chr20	38109137	38109295	(26334872)	+	MIR	SINE/MIR	31	194	(68)	2321400
315	26.3	3.8	3.8	chr20	38127158	38127315	(26316852)	+	LTR33B	LTR/ERVL	363	620	(0)	2321448
19	25.6	2.5	3.7	chr20	38134684	38134763	(26309404)	+	G-rich	Low_complexity	1	82	(0)	2321462
539	25.0	3.4	0.0	chr20	38144200	38144343	(26299824)	+	MIRb	SINE/MIR	49	197	(71)	2321482
657	25.9	7.4	1.5	chr20	38144562	38144765	(26299402)	C	MIR	SINE/MIR	(35)	227	11	2321483
228	28.6	1.0	7.5	chr20	38217934	38218039	(26226128)	+	MER5A	DNA/hAT-Charlie	65	163	(26)	2321650
188	31.4	0.0	7.9	chr20	38218029	38218104	(26226063)	C	L2c	LINE/L2	(203)	3184	3115	2321651
1063	11.9	0.6	8.8	chr20	38446271	38446464	(25997703)	C	MLT1A0	LTR/ERVL-MaLR	(9)	356	179	2322192
2217	20.8	3.3	3.3	chr20	44082796	44083338	(20360829)	C	L1ME2	LINE/L1	(63)	6101	5552	2332601
895	20.7	4.9	2.0	chr20	44204522	44204751	(20239416)	C	L1PA16	LINE/L1	(3)	6128	5896	2332907
321	4.2	12.7	0.0	chr20	44496810	44496857	(19947310)	+	HY3	scRNA	44	98	(3)	2333653
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
247	26.8	17.1	5.1	chr20	44692898	44693092	(19751075)	+	MIRc	SINE/MIR	37	268	(0)	2334102
227	22.4	17.3	0.0	chr20	44693122	44693188	(19750979)	C	MamTip2	DNA/hAT-Tip100	(155)	150	70	2334103
362	26.6	4.6	5.6	chr20	44693276	44693478	(19750689)	C	MIR3	SINE/MIR	(8)	200	5	2334104
701	29.5	3.4	3.1	chr20	45087873	45088194	(19355973)	+	ERVL-B4-int	LTR/ERVL	969	1291	(4423)	2334991
277	16.9	2.7	10.1	chr20	45088406	45088416	(19355751)	+	ERVL-B4-int	LTR/ERVL	1546	1555	(4112)	2334991
3569	10.7	1.0	0.6	chr20	45088417	45088913	(19355254)	+	LTR3B_	LTR/ERVK	1	499	(0)	2334992
286	30.7	8.8	0.9	chr20	45779013	45779127	(18665040)	C	MIRc	SINE/MIR	(137)	131	7	2336190
3209	15.1	6.0	0.8	chr20	45781414	45781946	(18662221)	C	MER68	LTR/ERVL	(0)	563	1	2336197
15	16.6	2.3	4.4	chr20	45833754	45833818	(18610349)	+	G-rich	Low_complexity	1	63	(0)	2336326
312	33.3	0.0	0.0	chr20	45911556	45911651	(18532516)	C	MIRc	SINE/MIR	(74)	194	99	2336530
1023	32.1	4.7	1.6	chr20	47146801	47147054	(17297113)	C	L2a	LINE/L2	(20)	3406	3142	2339321
1372	15.3	10.3	4.6	chr20	47333983	47334311	(17109856)	C	Tigger5b	DNA/TcMar-Tigger	(76)	396	47	2339770
1414	16.3	2.5	2.8	chr20	47334326	47334627	(17109540)	+	L1MB8	LINE/L1	5827	6152	(207)	2339769
12	13.9	0.0	0.0	chr20	47359222	47359245	(17084922)	+	(CCTC)n	Simple_repeat	1	24	(0)	2339810
1416	15.8	1.3	1.8	chr20	47379592	47379819	(17064348)	C	AluJo	SINE/Alu	(53)	259	33	2339875
1608	27.5	9.8	7.3	chr20	47379820	47380172	(17063995)	C	L2a	LINE/L2	(869)	2550	2181	2339870
1479	15.6	3.3	9.0	chr20	47568360	47568540	(16875627)	C	Tigger1	DNA/TcMar-Tigger	(34)	2384	2223	2340442
1246	14.6	0.0	0.0	chr20	49534843	49535020	(14909147)	+	AluJb	SINE/Alu	120	297	(15)	2344675
302	21.6	10.0	0.8	chr20	49535033	49535154	(14909013)	+	L1ME3G	LINE/L1	130	271	(621)	2344676
272	31.4	12.2	1.0	chr20	49535150	49535345	(14908822)	+	L1ME3G	LINE/L1	162	382	(542)	2344677
331	20.9	8.9	1.8	chr20	50115691	50115806	(14328361)	C	MIR	SINE/MIR	(0)	230	109	2346115
297	30.1	8.3	2.7	chr20	50116121	50116267	(14327900)	+	MIR	SINE/MIR	107	262	(0)	2346116
2037	13.1	0.0	0.0	chr20	50422862	50423180	(14020987)	+	AluSz	SINE/Alu	1	312	(0)	2346883
326	30.5	4.3	0.7	chr20	50423539	50423680	(14020487)	C	MIRc	SINE/MIR	(49)	159	16	2346884
14	25.6	0.0	5.3	chr20	50423713	50423769	(14020398)	+	GA-rich	Low_complexity	1	57	(0)	2346885
428	30.1	10.7	2.0	chr20	51750537	51750762	(12693405)	C	MIRb	SINE/MIR	(0)	262	17	2349818
808	20.9	11.5	1.1	chr20	53773675	53773853	(10670314)	+	MER58A	DNA/hAT-Charlie	10	209	(15)	2354312
236	23.3	19.5	0.9	chr20	53773869	53774041	(10670126)	+	MIRb	SINE/MIR	13	225	(43)	2354313
47	0.0	0.0	0.0	chr20	53893221	53893260	(10550907)	+	(AC)n	Simple_repeat	1	40	(0)	2354603
483	25.5	9.7	2.0	chr20	53893506	53893705	(10550462)	C	MER113	DNA/hAT-Charlie	(0)	521	305	2354604
708	24.9	10.6	6.8	chr20	53899230	53899609	(10544558)	C	LTR16A1	LTR/ERVL	(9)	447	52	2354621
34	5.6	0.0	0.0	chr20	53941396	53941433	(10502734)	+	(GT)n	Simple_repeat	1	38	(0)	2354719
17	6.4	0.0	10.0	chr20	53941526	53941565	(10502602)	+	(TAA)n	Simple_repeat	1	40	(0)	2354720
1644	19.7	3.9	0.3	chr20	54103333	54103678	(10340489)	C	MLT1E1A	LTR/ERVL-MaLR	(14)	666	308	2355051
1915	17.1	5.3	1.6	chr20	54103699	54104079	(10340088)	C	L1MA5	LINE/L1	(2)	6298	5903	2355052
2129	25.5	5.5	1.3	chr20	54134420	54134943	(10309224)	C	MLT1F	LTR/ERVL-MaLR	(1)	547	1	2355124
189	0.0	0.0	0.0	chr20	54345536	54345558	(10098609)	C	MIRc	SINE/MIR	(81)	187	165	2355533
545	30.8	5.5	4.7	chr20	54345636	54345878	(10098289)	+	MIR	SINE/MIR	8	260	(2)	2355534
24	23.1	0.0	2.9	chr20	56468525	56468593	(7975574)	+	(GCCCC)n	Simple_repeat	1	69	(0)	2359091
33	24.9	0.0	3.0	chr20	62938093	62938192	(1505975)	+	(CCCGCC)n	Simple_repeat	1	100	(0)	2369115
43	27.1	2.9	4.7	chr20	63216006	63216212	(1227955)	+	(GGC)n	Simple_repeat	1	213	(0)	2369380
13	19.6	4.0	3.9	chr20	63272867	63272916	(1171251)	+	(GCCCT)n	Simple_repeat	1	52	(0)	2369449
16	23.0	5.6	4.0	chr20	63969865	63969935	(474232)	+	(GC)n	Simple_repeat	1	75	(0)	2370305
17	22.4	7.3	0.0	chr20	63969995	63970011	(474156)	+	G-rich	Low_complexity	1	41	(32)	2370306
26	5.2	2.5	0.0	chr20	63970012	63970051	(474116)	+	(GGGGCG)n	Simple_repeat	1	41	(0)	2370307
17	22.4	7.3	0.0	chr20	63970052	63970062	(474105)	+	G-rich	Low_complexity	42	73	(0)	2370306
15	4.1	0.0	6.9	chr20	64063098	64063126	(381041)	+	(GCGG)n	Simple_repeat	1	29	(0)	2370474
1159	19.5	6.6	2.0	chr21	17848945	17849247	(28860736)	C	MER33	DNA/hAT-Charlie	(0)	324	7	2382291
2362	8.3	0.0	2.7	chr21	17849375	17849674	(28860309)	C	AluSc	SINE/Alu	(17)	292	1	2382292
405	25.2	4.8	8.6	chr21	21714349	21714525	(24995458)	C	MLT1G1	LTR/ERVL-MaLR	(5)	543	348	2387333
412	30.9	4.4	2.9	chr21	21714712	21714934	(24995049)	C	MLT1G1	LTR/ERVL-MaLR	(312)	237	11	2387333
259	33.9	2.4	4.0	chr21	21715492	21715617	(24994366)	+	L2	LINE/L2	1986	2109	(1310)	2387332
381	27.8	10.9	3.7	chr21	21715726	21715912	(24994071)	C	LTR88b	LTR/Gypsy?	(625)	212	11	2387334
4112	13.8	0.4	6.8	chr21	25107708	25108445	(21601538)	C	LTR8	LTR/ERV1	(0)	691	1	2392059
808	34.4	5.3	0.7	chr21	26588125	26588540	(20121443)	+	MLT1M	LTR/ERVL-MaLR	4	439	(233)	2394223
394	28.6	8.9	4.9	chr21	28540823	28540984	(18168999)	+	MIRc	SINE/MIR	2	170	(98)	2396901
16661	12.6	2.2	1.1	chr21	28714652	28717480	(17992503)	C	L1PA16	LINE/L1	(9)	6157	3298	2397140
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
2238	12.2	0.0	0.3	chr21	29217466	29217767	(17492216)	+	AluSz	SINE/Alu	1	301	(11)	2397960
357	37.7	4.0	4.8	chr21	29217997	29218247	(17491736)	+	L2b	LINE/L2	3101	3349	(26)	2397961
212	29.7	9.9	1.1	chr21	30718332	30718423	(15991560)	C	OldhAT1	DNA/hAT-Ac	(1704)	1144	1044	2400148
2491	15.3	3.1	5.4	chr21	32597003	32597486	(14112497)	C	L1MB3	LINE/L1	(51)	6132	5647	2403486
379	25.4	4.4	3.7	chr21	32597492	32597626	(14112357)	C	L1ME4b	LINE/L1	(43)	849	714	2403487
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
600	28.9	11.1	3.9	chr21	33968192	33968612	(12741371)	C	MLT1J	LTR/ERVL-MaLR	(19)	429	1	2405907
544	34.0	1.1	2.1	chr21	33968791	33968832	(12741151)	C	Eulor5A	DNA?	(117)	199	160	2405908
323	36.9	3.2	3.2	chr21	33968833	33969017	(12740966)	+	Eulor5A	DNA?	3	187	(129)	2405909
2603	11.3	0.5	1.6	chr21	35303352	35303730	(11406253)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2407917
403	29.4	15.5	3.2	chr21	35619192	35619507	(11090476)	+	L2c	LINE/L2	2408	2769	(650)	2408387
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
250	28.9	3.1	6.6	chr21	38277629	38277795	(8432188)	+	X7A_LINE	LINE/CR1	46	206	(61)	2412815
2461	3.5	0.0	1.7	chr21	38756389	38756706	(7953277)	C	AluY	SINE/Alu	(0)	311	1	2413455
1780	27.8	5.0	3.0	chr21	38756707	38757311	(7952672)	C	L1ME3B	LINE/L1	(304)	5938	5319	2413454
362	27.8	0.0	0.9	chr21	38839935	38840050	(7869933)	C	MER5B	DNA/hAT-Charlie	(63)	115	1	2413586
804	17.3	5.1	2.6	chr21	38925726	38925915	(7784068)	+	MER20	DNA/hAT-Charlie	1	195	(24)	2413711
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
17	18.5	0.0	0.0	chr21	39349263	39349293	(7360690)	+	(C)n	Simple_repeat	1	31	(0)	2414411
1805	12.8	1.1	0.0	chr21	39349731	39349988	(7359995)	C	AluJb	SINE/Alu	(22)	290	30	2414412
853	29.8	5.8	7.5	chr21	41615458	41615733	(5094250)	C	L1MC4a	LINE/L1	(2136)	5746	5459	2417735
697	34.0	9.7	2.4	chr21	41615810	41616346	(5093637)	C	L4_C_Mam	LINE/RTE-X	(445)	4693	4114	2417737
32	23.9	1.2	1.1	chr21	42974686	42974771	(3735212)	+	(CCG)n	Simple_repeat	1	87	(0)	2419664
234	34.3	6.2	2.4	chr21	43586164	43586333	(3123650)	+	Plat_L3	LINE/CR1	3047	3223	(363)	2420461
185	28.9	1.9	0.0	chr21	43586399	43586450	(3123533)	+	L3b	LINE/CR1	4950	5002	(230)	2420462
978	27.6	7.5	3.3	chr21	43600951	43601497	(3108486)	C	L1ME3D	LINE/L1	(383)	5859	5288	2420489
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
384	26.3	10.5	0.0	chr21	45012451	45012587	(1697396)	C	MLT1D	LTR/ERVL-MaLR	(352)	153	1	2422406
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
1969	26.0	9.3	0.5	chr21	45228181	45228799	(1481184)	+	MER63C	DNA/hAT-Blackjack	252	930	(0)	2422652
335	32.2	7.3	2.9	chr21	45363872	45364079	(1345904)	+	L2b	LINE/L2	3156	3373	(2)	2422790
12	13.3	6.4	6.0	chr21	45875289	45875335	(834648)	+	(TGC)n	Simple_repeat	1	50	(0)	2423289
8118	4.3	0.0	0.7	chr21	46225021	46226027	(483956)	+	LTR13	LTR/ERVK	6	1005	(2)	2423633
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
675	33.5	1.3	2.1	chr22	18032862	18033096	(32785372)	+	MIRc	SINE/MIR	31	263	(5)	2430089
184	31.7	2.4	2.4	chr22	18056525	18056608	(32761860)	C	X8_LINE	LINE/CR1	(210)	86	3	2430140
2144	10.8	0.0	6.8	chr22	23717835	23718158	(27100310)	+	AluSz6	SINE/Alu	1	302	(10)	2438792
2164	24.5	5.0	3.5	chr22	24207848	24208165	(26610303)	C	L1M5	LINE/L1	(2302)	3844	3517	2439631
354	27.3	2.9	0.8	chr22	24208183	24208358	(26610110)	C	L1ME4b	LINE/L1	(698)	194	45	2439654
324	31.9	3.8	8.4	chr22	24486378	24486651	(26331817)	C	CR1-3_Croc	LINE/CR1	(933)	2672	2412	2440127
625	32.9	5.6	3.5	chr22	24486804	24487030	(26331438)	+	MamSINE1	SINE/tRNA-RTE	1	232	(58)	2440128
189	31.5	0.0	10.7	chr22	26658902	26659022	(24159446)	C	MIRc	SINE/MIR	(39)	229	122	2444879
305	24.5	1.1	14.6	chr22	26718967	26719076	(24099392)	C	MamTip2	DNA/hAT-Tip100	(157)	148	54	2445008
486	27.7	10.7	3.2	chr22	26719336	26719525	(24098943)	+	MIRb	SINE/MIR	54	259	(9)	2445009
456	24.1	16.8	3.8	chr22	27238899	27239083	(23579385)	C	MIRb	SINE/MIR	(15)	253	40	2446269
422	26.7	1.6	0.8	chr22	28112971	28113091	(22705377)	+	MIRb	SINE/MIR	147	268	(0)	2447989
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
25	9.8	0.0	4.2	chr22	29031030	29031077	(21787391)	+	(CCCTGC)n	Simple_repeat	1	48	(0)	2449755
2373	9.4	0.3	0.0	chr22	29343829	29344135	(21474333)	+	AluSq10	SINE/Alu	1	308	(5)	2450352
14	22.2	5.5	3.9	chr22	29481001	29481080	(21337388)	+	(GCGACGC)n	Simple_repeat	1	81	(0)	2450661
13	19.2	6.1	1.9	chr22	29553633	29553681	(21264787)	+	(CCCATCT)n	Simple_repeat	1	52	(0)	2450825
242	25.1	9.8	1.5	chr22	29553838	29553941	(21264527)	+	L2a	LINE/L2	3260	3423	(3)	2450826
2179	19.6	3.3	1.4	chr22	29587913	29588352	(21230116)	C	MLT1F	LTR/ERVL-MaLR	(14)	534	86	2450931
908	15.8	0.0	0.7	chr22	29588362	29588507	(21229961)	C	AluJo	SINE/Alu	(30)	282	138	2450932
233	24.6	1.7	0.0	chr22	29588553	29588609	(21229859)	C	MLT1F	LTR/ERVL-MaLR	(490)	58	1	2450931
1778	15.4	1.3	2.6	chr22	29912962	29913266	(20905202)	+	AluJr	SINE/Alu	2	302	(10)	2451636
17	25.9	3.3	0.0	chr22	30196446	30196505	(20621963)	+	(CGCCAT)n	Simple_repeat	1	62	(0)	2452112
317	33.1	2.8	3.9	chr22	30208927	30209108	(20609360)	C	MIR3	SINE/MIR	(11)	197	18	2452140
453	24.8	8.7	0.7	chr22	30356405	30356542	(20461926)	C	MER5A1	DNA/hAT-Charlie	(0)	166	17	2452430
44	24.2	3.4	4.3	chr22	31346131	31346309	(19472159)	+	(GGC)n	Simple_repeat	1	185	(0)	2454548
13	28.1	3.6	0.0	chr22	31346606	31346661	(19471807)	+	(CACTCCC)n	Simple_repeat	1	58	(0)	2454549
272	29.9	3.0	8.0	chr22	31347732	31347869	(19470599)	+	MIRc	SINE/MIR	45	175	(93)	2454550
320	23.8	16.9	1.4	chr22	31750361	31750505	(19067963)	+	L2a	LINE/L2	2668	2839	(580)	2455530
2322	10.5	0.0	0.0	chr22	31829255	31829558	(18988910)	+	AluSq2	SINE/Alu	6	309	(4)	2455734
2036	11.8	6.6	2.7	chr22	35230881	35231246	(15587222)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2462530
221	33.0	7.3	1.7	chr22	35231258	35231374	(15587094)	C	L2c	LINE/L2	(1)	3386	3263	2462531
12	11.9	0.0	6.5	chr22	35630044	35630074	(15188394)	+	G-rich	Low_complexity	1	31	(0)	2463469
93	11.3	5.8	0.0	chr22	35630216	35630389	(15188079)	+	GA-rich	Low_complexity	1	184	(0)	2463470
2596	21.3	9.8	4.9	chr22	35965871	35966831	(14851637)	C	L1ME3A	LINE/L1	(7)	6166	5199	2464070
422	26.1	12.1	2.5	chr22	36465528	36465684	(14352784)	+	MIRb	SINE/MIR	55	228	(40)	2465117
336	33.0	3.8	2.2	chr22	36465691	36465870	(14352598)	+	MIRb	SINE/MIR	3	185	(83)	2465118
521	23.8	3.8	0.7	chr22	36468282	36468429	(14350039)	+	MIRb	SINE/MIR	36	192	(76)	2465120
485	27.5	1.1	7.1	chr22	37229765	37229933	(13588535)	C	MIR3	SINE/MIR	(24)	184	27	2466759
2291	11.2	2.6	0.0	chr22	37327836	37328139	(13490329)	C	AluSx1	SINE/Alu	(0)	312	1	2466995
438	32.5	9.6	8.0	chr22	37328140	37328219	(13490249)	+	L2c	LINE/L2	3323	3386	(1)	2466994
249	25.9	5.8	12.0	chr22	37328238	37328404	(13490064)	+	L2	LINE/L2	2809	2964	(455)	2466996
2013	21.0	6.5	1.0	chr22	37432457	37432961	(13385507)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	12	2467222
16	18.0	4.5	0.0	chr22	37608817	37608860	(13209608)	+	G-rich	Low_complexity	1	46	(0)	2467651
357	33.9	4.6	0.0	chr22	37752809	37752973	(13065495)	C	MIR3	SINE/MIR	(2)	206	34	2467981
2280	3.7	5.5	0.0	chr22	37844596	37844867	(12973601)	C	AluSc	SINE/Alu	(21)	288	1	2468202
2430	8.9	0.0	0.0	chr22	37848392	37848695	(12969773)	C	AluSx	SINE/Alu	(8)	304	1	2468217
1096	30.9	12.3	1.9	chr22	38200999	38201741	(12616727)	C	L2a	LINE/L2	(228)	3198	2244	2469021
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
13	14.7	3.3	0.0	chr22	39520440	39520469	(11297999)	+	G-rich	Low_complexity	1	31	(0)	2471815
13	23.6	0.0	0.0	chr22	40636655	40636689	(10181779)	+	(CGC)n	Simple_repeat	1	35	(0)	2473972
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
2012	13.8	0.0	0.7	chr22	42635933	42636228	(8182240)	+	AluJb	SINE/Alu	1	294	(18)	2478537
519	26.4	11.0	2.1	chr22	44037485	44037674	(6780794)	C	MIR	SINE/MIR	(18)	244	36	2481237
228	33.7	3.1	0.0	chr22	44363856	44363940	(6454528)	C	MIR3	SINE/MIR	(85)	183	93	2481841
708	28.1	9.6	2.1	chr22	45688810	45689096	(5129372)	C	MamRep137	DNA/TcMar-Tigger	(136)	374	64	2484391
708	22.5	6.5	0.5	chr22	45709329	45709529	(5108939)	C	MLT1K	LTR/ERVL-MaLR	(4)	591	378	2484428
1279	31.5	11.3	2.2	chr22	45709532	45710612	(5107856)	+	L2a	LINE/L2	2175	3374	(52)	2484429
14	7.3	6.9	0.0	chr22	46007889	46007917	(4810551)	+	(GGGCA)n	Simple_repeat	1	31	(0)	2484866
412	32.0	3.4	3.0	chr22	46117887	46118112	(4700356)	C	MIR3	SINE/MIR	(33)	235	3	2485013
18	12.4	0.0	2.7	chr22	46267947	46267983	(4550485)	+	(CCGCC)n	Simple_repeat	1	37	(0)	2485277
13	17.5	1.9	7.5	chr22	46268158	46268209	(4550259)	+	(GGCGCG)n	Simple_repeat	1	53	(0)	2485278
2480	6.1	0.0	0.3	chr22	50148652	50148963	(669505)	C	AluY	SINE/Alu	(0)	311	1	2490266
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
209	36.7	2.4	0.0	chr3	9363318	9363437	(188932122)	+	MIR3	SINE/MIR	34	156	(52)	2507069
2191	11.2	0.3	0.0	chr3	9648896	9649190	(188646369)	C	AluSz	SINE/Alu	(15)	297	2	2507671
16	27.6	3.0	1.4	chr3	9649441	9649507	(188646052)	+	(GGCGGA)n	Simple_repeat	1	69	(0)	2507672
54	0.0	3.8	0.0	chr3	10192024	10192076	(188103483)	+	(GT)n	Simple_repeat	1	55	(0)	2508886
321	30.3	6.6	1.3	chr3	10205723	10205879	(188089680)	+	MER113A	DNA/hAT-Charlie	141	306	(8)	2508918
446	28.4	16.7	4.0	chr3	10206000	10206395	(188089164)	C	LTR16B2	LTR/ERVL	(4)	458	3	2508919
230	31.9	6.8	11.1	chr3	11137294	11137554	(187158005)	C	L2	LINE/L2	(601)	2818	2570	2510827
302	29.3	18.4	0.6	chr3	11185598	11185762	(187109797)	+	MIRc	SINE/MIR	30	230	(38)	2510947
4335	18.8	6.5	1.2	chr3	11238527	11239730	(187055829)	C	L1MB7	LINE/L1	(1)	6183	4902	2511073
26	15.7	0.0	0.0	chr3	11392460	11392502	(186903057)	+	A-rich	Low_complexity	1	43	(0)	2511379
1771	26.1	10.3	2.4	chr3	11392757	11393391	(186902168)	C	LTR82B	LTR/ERVL	(0)	830	140	2511380
286	29.9	3.0	3.0	chr3	12484949	12485048	(185810511)	C	MIRb	SINE/MIR	(8)	260	161	2513363
572	26.3	1.9	1.3	chr3	14428425	14428578	(183866981)	C	MIR	SINE/MIR	(2)	260	106	2516938
13	19.3	2.2	4.3	chr3	15206100	15206144	(183089415)	+	(GCCCG)n	Simple_repeat	1	46	(0)	2518367
2142	15.2	3.2	0.3	chr3	15638649	15638985	(182656574)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	2	2519183
1329	17.9	18.3	1.6	chr3	15639323	15639708	(182655851)	C	LTR37B	LTR/ERV1	(0)	468	4	2519184
367	26.6	10.6	1.7	chr3	15647971	15648150	(182647409)	+	MLT1M	LTR/ERVL-MaLR	34	231	(441)	2519198
786	18.8	4.0	4.0	chr3	16180075	16180251	(182115308)	C	MER5A	DNA/hAT-Charlie	(12)	177	1	2520080
701	22.9	1.3	2.5	chr3	16180292	16180448	(182115111)	C	MER5A1	DNA/hAT-Charlie	(0)	166	12	2520081
203	34.7	11.7	3.4	chr3	16180475	16180623	(182114936)	C	MER5A	DNA/hAT-Charlie	(6)	183	21	2520082
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
12	25.6	0.0	6.9	chr3	19146921	19146978	(179148581)	+	(CCGCC)n	Simple_repeat	1	58	(0)	2524271
1004	29.1	4.7	7.0	chr3	19888926	19889365	(178406194)	+	HERVL40-int	LTR/ERVL	142	570	(4960)	2525248
1979	30.2	3.8	3.5	chr3	19889417	19889749	(178405810)	+	HERVL40-int	LTR/ERVL	567	892	(4638)	2525248
224	34.0	3.4	2.8	chr3	20057279	20057423	(178238136)	C	L2	LINE/L2	(1003)	2416	2271	2525599
5506	15.4	3.5	1.2	chr3	20621514	20622962	(177672597)	C	L1MA3	LINE/L1	(0)	7724	6752	2526366
588	34.3	6.9	1.8	chr3	20648209	20648591	(177646968)	C	MLT1J	LTR/ERVL-MaLR	(36)	476	73	2526402
22	3.9	0.0	0.0	chr3	21436142	21436168	(176859391)	+	(TG)n	Simple_repeat	1	27	(0)	2527370
606	29.8	4.0	2.4	chr3	21718461	21718708	(176576851)	C	MIR	SINE/MIR	(8)	254	3	2527780
1940	14.9	0.7	0.7	chr3	22474724	22475019	(175820540)	C	AluSz	SINE/Alu	(16)	296	1	2528754
1116	23.0	7.3	5.2	chr3	23668794	23669142	(174626417)	+	Arthur1	DNA/hAT-Tip100	1	357	(3590)	2530500
220	23.9	1.5	4.3	chr3	24220897	24220966	(174074593)	+	MIR1_Amn	SINE/MIR	82	149	(81)	2531528
13	13.2	0.0	0.0	chr3	24254662	24254686	(174040873)	+	(TTC)n	Simple_repeat	1	25	(0)	2531586
272	30.3	9.2	0.0	chr3	24299797	24299905	(173995654)	C	MARNA	DNA/TcMar-Mariner	(42)	544	425	2531659
211	32.5	2.5	5.7	chr3	24300137	24300260	(173995299)	C	MIR3	SINE/MIR	(52)	156	37	2531660
668	25.6	10.6	2.2	chr3	25573010	25573277	(172722282)	+	LTR16C	LTR/ERVL	178	470	(19)	2533529
190	23.5	1.9	1.9	chr3	27311741	27311792	(170983767)	C	MIR	SINE/MIR	(90)	172	121	2535874
403	7.5	0.0	27.9	chr3	27431032	27431142	(170864417)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	2536044
928	30.4	10.6	0.8	chr3	27520971	27521575	(170773984)	C	L2a	LINE/L2	(25)	3401	2732	2536245
1428	25.9	3.3	5.0	chr3	27521606	27522137	(170773422)	+	MLT1E1A	LTR/ERVL-MaLR	52	680	(0)	2536246
325	35.3	0.0	2.5	chr3	29186241	29186359	(169109200)	C	MER130	DNA	(1471)	123	8	2538816
381	24.3	5.9	4.6	chr3	29427749	29427899	(168867660)	C	UCON31	Unknown	(224)	230	78	2539151
4204	17.5	1.4	0.9	chr3	30273252	30274030	(168021529)	C	L1PB4	LINE/L1	(4)	6152	5370	2540320
234	25.8	7.4	9.0	chr3	30342636	30342801	(167952758)	C	Charlie14a	DNA/hAT-Charlie	(961)	205	43	2540409
325	35.3	14.4	0.0	chr3	30347902	30348118	(167947441)	+	MIRb	SINE/MIR	1	262	(6)	2540418
254	40.1	4.3	1.0	chr3	31077211	31077502	(167218057)	+	L2	LINE/L2	2561	2862	(557)	2541512
208	28.6	8.4	0.0	chr3	32226919	32227016	(166068543)	+	MIR	SINE/MIR	81	187	(75)	2543472
414	31.0	12.2	1.4	chr3	32227082	32227300	(166068259)	+	MIRb	SINE/MIR	3	248	(20)	2543473
443	33.9	9.9	4.2	chr3	32227388	32227500	(166068059)	C	MLT1J	LTR/ERVL-MaLR	(41)	471	364	2543474
2078	14.5	0.0	0.3	chr3	32249158	32249454	(166046105)	+	AluJb	SINE/Alu	12	307	(5)	2543516
5804	15.8	2.3	2.4	chr3	32249455	32250742	(166044817)	C	L1MB7	LINE/L1	(584)	5848	4557	2543509
36	2.6	2.6	0.0	chr3	32469896	32469934	(165825625)	+	(GT)n	Simple_repeat	1	40	(0)	2543940
1989	10.1	6.5	0.7	chr3	32470161	32470437	(165825122)	C	AluSp	SINE/Alu	(19)	294	1	2543941
3807	19.1	5.4	3.0	chr3	32683975	32684843	(165610716)	+	L1MC3	LINE/L1	6893	7783	(2)	2544421
208	31.6	3.7	0.0	chr3	32684855	32684933	(165610626)	+	MIR	SINE/MIR	151	232	(30)	2544422
320	28.7	5.5	3.5	chr3	35929032	35929172	(162366387)	C	MIR	SINE/MIR	(3)	259	116	2549276
266	34.0	3.5	0.9	chr3	35929568	35929677	(162365882)	+	MIR3	SINE/MIR	94	206	(2)	2549277
22	0.0	0.0	0.0	chr3	37936657	37936680	(160358879)	+	(A)n	Simple_repeat	1	24	(0)	2552296
443	28.3	12.3	0.9	chr3	38496656	38496949	(159798610)	+	L2a	LINE/L2	3035	3426	(0)	2553123
11	22.9	3.2	6.2	chr3	39150971	39151033	(159144526)	+	(CAGAGG)n	Simple_repeat	1	65	(0)	2554039
22	21.4	0.0	4.6	chr3	40309721	40309785	(157985774)	+	(CCT)n	Simple_repeat	1	65	(0)	2555737
8028	6.1	0.6	0.2	chr3	41695675	41696677	(156598882)	+	LTR13	LTR/ERVK	1	1007	(0)	2557815
224	32.6	12.8	2.3	chr3	43753966	43754097	(154541462)	C	MIRb	SINE/MIR	(7)	261	114	2561098
418	24.8	6.3	0.9	chr3	43866441	43866631	(154428928)	C	MIR	SINE/MIR	(42)	226	24	2561280
266	22.5	1.4	0.0	chr3	43866680	43866750	(154428809)	C	MamTip3	DNA/hAT-Tip100	(63)	437	366	2561281
303	22.1	3.1	4.0	chr3	43866762	43866860	(154428699)	C	MamTip3	DNA/hAT-Tip100	(203)	297	200	2561281
295	27.5	9.2	7.5	chr3	43866913	43867073	(154428486)	C	MamTip3	DNA/hAT-Tip100	(295)	205	42	2561281
448	30.9	7.5	0.8	chr3	43869895	43870132	(154425427)	+	MIR	SINE/MIR	2	256	(6)	2561288
507	25.0	5.9	3.8	chr3	43872365	43872547	(154423012)	C	LTR85c	LTR/Gypsy?	(199)	624	438	2561292
380	34.0	6.3	1.0	chr3	44554812	44555007	(153740552)	C	MIRb	SINE/MIR	(19)	249	43	2562296
417	27.9	11.4	4.9	chr3	44555896	44556140	(153739419)	C	L2c	LINE/L2	(0)	3387	3125	2562297
283	18.5	21.2	0.0	chr3	44885598	44885705	(153409854)	+	MIRb	SINE/MIR	110	246	(22)	2562843
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
335	32.5	0.0	2.4	chr3	45123013	45123138	(153172421)	C	L1M5	LINE/L1	(1162)	4984	4862	2563272
2857	1.6	0.0	0.0	chr3	45133437	45133742	(153161817)	+	AluY	SINE/Alu	1	306	(5)	2563291
236	30.4	3.8	1.0	chr3	45133937	45134039	(153161520)	+	MamRep1527	LTR	296	401	(568)	2563292
281	24.3	3.6	2.7	chr3	45167630	45167739	(153127820)	C	LTR33	LTR/ERVL	(0)	515	405	2563358
625	29.0	8.2	4.2	chr3	45667022	45667428	(152628131)	C	MLT1K	LTR/ERVL-MaLR	(153)	442	18	2564258
846	18.0	8.0	0.0	chr3	45667853	45668002	(152627557)	C	MER5A	DNA/hAT-Charlie	(26)	163	1	2564260
24	8.7	0.0	0.0	chr3	46976880	46976916	(151318643)	+	(CCCGC)n	Simple_repeat	1	37	(0)	2566209
2402	7.7	0.0	0.3	chr3	47512992	47513291	(150782268)	C	AluSx	SINE/Alu	(13)	299	1	2567324
14	14.3	0.0	3.0	chr3	48034349	48034381	(150261178)	+	GA-rich	Low_complexity	1	33	(0)	2568482
300	36.3	3.4	2.3	chr3	48507801	48507975	(149787584)	+	MLT1N2	LTR/ERVL-MaLR	353	529	(33)	2569471
2065	10.5	0.0	2.3	chr3	49429415	49429719	(148865840)	C	AluSx1	SINE/Alu	(10)	302	5	2571324
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
13	0.0	0.0	0.0	chr3	50238164	50238180	(148057379)	+	(GCT)n	Simple_repeat	1	17	(0)	2572808
12	23.9	0.0	2.4	chr3	50292275	50292315	(148003244)	+	G-rich	Low_complexity	1	41	(0)	2572875
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
33	0.0	0.0	0.0	chr3	51500117	51500152	(146795407)	+	(A)n	Simple_repeat	1	36	(0)	2574462
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
1073	5.0	0.0	0.0	chr3	56132526	56132645	(142162914)	+	AluYa8	SINE/Alu	170	289	(21)	2581554
272	30.9	5.0	7.3	chr3	57974765	57974860	(140320699)	C	MIR1_Amn	SINE/MIR	(118)	112	19	2585067
1012	29.2	7.0	0.6	chr3	57983408	57983765	(140311794)	+	LTR16C	LTR/ERVL	107	489	(0)	2585097
624	23.4	2.1	2.8	chr3	57983777	57983921	(140311638)	C	MIR	SINE/MIR	(8)	254	111	2585098
252	21.3	9.6	6.0	chr3	57984030	57984129	(140311430)	C	MIRb	SINE/MIR	(138)	130	27	2585082
1874	20.4	3.8	12.8	chr3	57984135	57984593	(140310966)	+	MLT1D	LTR/ERVL-MaLR	1	438	(67)	2585099
4012	13.5	5.5	0.8	chr3	59100977	59101612	(139193947)	+	MER57-int	LTR/ERV1	184	851	(5095)	2587025
13797	15.7	6.5	3.7	chr3	59101606	59103952	(139191607)	+	MER57-int	LTR/ERV1	1552	3975	(3562)	2587025
242	22.1	2.5	1.3	chr3	59245842	59245919	(139049640)	C	LTR90A	LTR	(8)	968	890	2587233
348	31.2	0.8	3.1	chr3	59246003	59246131	(139049428)	C	LTR90A	LTR	(181)	795	670	2587233
16	5.3	0.0	0.0	chr3	61560968	61560987	(136734572)	+	(A)n	Simple_repeat	1	20	(0)	2590826
2657	15.9	2.0	0.9	chr3	61574639	61575075	(136720484)	C	MSTB2	LTR/ERVL-MaLR	(1)	456	15	2590844
191	35.8	2.4	1.2	chr3	61628111	61628192	(136667367)	C	L2b	LINE/L2	(2)	3373	3291	2590950
2587	8.6	0.0	0.0	chr3	61630777	61631080	(136664479)	+	AluSx4	SINE/Alu	2	305	(5)	2590954
3480	13.1	7.6	0.0	chr3	61663489	61663977	(136631582)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2591024
473	29.6	5.8	0.7	chr3	61663978	61664001	(136631558)	+	MIRb	SINE/MIR	212	241	(27)	2591023
267	37.0	2.3	2.3	chr3	63051909	63052038	(135243521)	+	AmnSINE2	SINE/tRNA-Deu	16	145	(213)	2593348
441	29.1	2.2	3.6	chr3	63450972	63451110	(134844449)	+	MIRc	SINE/MIR	24	160	(108)	2594056
355	29.3	6.1	2.5	chr3	63725404	63725638	(134569921)	+	L1ME4a	LINE/L1	5876	6119	(5)	2594546
1209	29.6	3.8	1.1	chr3	63809500	63809815	(134485744)	+	L2a	LINE/L2	2808	3127	(299)	2594702
501	8.8	0.0	11.1	chr3	63809816	63809865	(134485694)	C	MADE1	DNA/TcMar-Mariner	(0)	80	37	2594703
2097	12.0	1.4	0.7	chr3	63809866	63810157	(134485402)	+	AluSx1	SINE/Alu	1	294	(18)	2594704
198	23.7	0.0	0.0	chr3	64187170	64187207	(134108352)	+	MIR3	SINE/MIR	36	73	(135)	2595282
1541	32.1	11.0	2.2	chr3	65030513	65031391	(133264168)	C	L2b	LINE/L2	(497)	2922	1946	2596786
327	29.3	8.1	6.0	chr3	66115781	66116186	(132179373)	+	MLT1J	LTR/ERVL-MaLR	110	610	(0)	2598715
913	22.2	5.0	0.0	chr3	67461590	67461796	(130833763)	C	MER20	DNA/hAT-Charlie	(1)	218	1	2600856
789	14.0	0.6	11.3	chr3	67462029	67462213	(130833346)	+	MER21A	LTR/ERVL	1	165	(766)	2600857
260	24.4	3.0	5.4	chr3	67462135	67462276	(130833283)	+	MER39	LTR/ERV1	77	283	(424)	2600858
2282	7.9	0.3	2.0	chr3	69242709	69243012	(129052547)	+	AluSq4	SINE/Alu	1	299	(12)	2603760
15	5.5	0.0	0.0	chr3	71511494	71511512	(126784047)	+	(A)n	Simple_repeat	1	19	(0)	2607345
281	33.1	10.6	0.0	chr3	71537586	71537712	(126757847)	+	MIR	SINE/MIR	24	165	(97)	2607386
231	26.6	7.9	1.7	chr3	72270124	72270246	(126025313)	C	MIR3	SINE/MIR	(105)	163	29	2608828
1383	21.6	13.1	5.0	chr3	72346284	72346745	(125948814)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2608999
666	34.2	5.7	1.1	chr3	72492021	72492386	(125803173)	+	LTR81AB	LTR/Gypsy	301	684	(505)	2609256
498	25.6	5.5	0.0	chr3	72492401	72492521	(125803038)	C	MER91A	DNA/hAT-Tip100	(0)	196	69	2609258
515	30.1	5.3	2.3	chr3	72848661	72848881	(125446678)	+	MIR	SINE/MIR	18	245	(17)	2610047
220	18.4	2.0	2.0	chr3	73580582	73580631	(124714928)	C	OldhAT1	DNA/hAT-Ac	(903)	1945	1896	2611389
40	0.0	0.0	0.0	chr3	73600305	73600338	(124695221)	+	(AC)n	Simple_repeat	1	34	(0)	2611418
25	0.0	0.0	0.0	chr3	73600339	73600366	(124695193)	+	(TC)n	Simple_repeat	1	28	(0)	2611419
867	27.0	12.3	1.1	chr3	74465748	74466099	(123829460)	+	MLT1K	LTR/ERVL-MaLR	195	591	(4)	2612814
657	32.4	0.5	2.7	chr3	79167747	79167968	(119127591)	+	MIR	SINE/MIR	20	236	(26)	2619111
3664	24.6	5.1	2.9	chr3	83177931	83178377	(115117182)	C	L1MDa	LINE/L1	(2807)	3730	3261	2624296
2344	11.5	2.0	0.3	chr3	83178378	83178726	(115116833)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2624299
3664	24.6	5.1	2.9	chr3	83178727	83179403	(115116156)	C	L1MDa	LINE/L1	(3277)	3260	2569	2624296
2430	22.6	3.4	1.6	chr3	87855617	87856312	(110439247)	+	Tigger7	DNA/TcMar-Tigger	1	700	(5)	2630051
23	22.5	4.5	3.3	chr3	88058915	88059002	(110236557)	+	(CCG)n	Simple_repeat	1	92	(0)	2630311
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
886	15.1	1.4	1.4	chr3	94062637	94062782	(104232777)	C	AluJr	SINE/Alu	(15)	297	152	2633773
447	22.7	3.5	0.9	chr3	94063363	94063473	(104232086)	+	L2a	LINE/L2	3313	3426	(0)	2633774
47	0.0	0.0	0.0	chr3	97765212	97765251	(100530308)	+	(GT)n	Simple_repeat	1	40	(0)	2638216
7222	11.1	3.2	0.3	chr3	98829292	98831069	(99464490)	C	L1PREC2	LINE/L1	(3)	8152	6316	2639511
1478	25.4	14.2	0.2	chr3	98855615	98856205	(99439354)	C	Charlie24	DNA/hAT-Charlie	(828)	1622	935	2639552
12	18.0	10.0	0.0	chr3	98923005	98923054	(99372505)	+	(CATTCAT)n	Simple_repeat	1	55	(0)	2639633
2084	23.1	14.6	5.7	chr3	99473440	99474692	(98820867)	C	L1MEg	LINE/L1	(363)	7118	5721	2640293
831	14.8	3.0	0.0	chr3	99862058	99862219	(98433340)	+	L1MA8	LINE/L1	6121	6287	(4)	2640818
969	18.0	3.6	6.6	chr3	99862472	99862697	(98432862)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2640819
20	8.4	5.3	0.0	chr3	99876079	99876116	(98419443)	+	(GCCGGG)n	Simple_repeat	1	40	(0)	2640829
18	29.8	0.0	0.0	chr3	99876246	99876302	(98419257)	+	(GCG)n	Simple_repeat	1	57	(0)	2640830
17	5.0	0.0	0.0	chr3	99901816	99901836	(98393723)	+	(AC)n	Simple_repeat	1	21	(0)	2640865
199	36.0	2.0	2.9	chr3	100041234	100041336	(98254223)	C	MER131	DNA?	(87)	128	27	2641087
266	27.7	12.0	0.0	chr3	100047664	100047779	(98247780)	+	MIRc	SINE/MIR	19	149	(59)	2641096
19	16.4	5.2	3.3	chr3	100637224	100637281	(97658278)	+	(ATG)n	Simple_repeat	1	61	(0)	2642014
26	0.0	0.0	0.0	chr3	100954976	100955000	(97340559)	+	(T)n	Simple_repeat	1	25	(0)	2642374
6346	13.7	2.3	0.7	chr3	101036422	101037429	(97258130)	+	ERVL-int	LTR/ERVL	4543	5567	(190)	2642481
669	22.3	4.8	0.0	chr3	102161421	102161577	(96133982)	+	L1MC5	LINE/L1	8532	8696	(608)	2644170
212	31.4	0.0	4.1	chr3	102161641	102161713	(96133846)	+	MIR3	SINE/MIR	87	156	(52)	2644171
16	9.3	0.0	0.0	chr3	102161717	102161739	(96133820)	+	(A)n	Simple_repeat	1	23	(0)	2644172
355	39.0	2.2	6.7	chr3	102163591	102163873	(96131686)	+	MamTip2	DNA/hAT-Tip100	33	302	(3)	2644177
5311	11.6	5.2	2.4	chr3	102979858	102980677	(95314882)	C	LTR25	LTR/ERV1	(0)	844	1	2645240
4842	13.8	3.0	0.1	chr3	104197688	104198462	(94097097)	C	L1PA16	LINE/L1	(9)	6157	5360	2646764
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
1590	23.3	8.9	9.3	chr3	105597944	105598673	(92696886)	C	LTR8B	LTR/ERV1	(7)	813	1	2648454
16	9.7	0.0	0.0	chr3	105806480	105806501	(92489058)	+	(A)n	Simple_repeat	1	22	(0)	2648729
12	16.6	4.5	4.3	chr3	106371887	106371930	(91923629)	+	(CATTT)n	Simple_repeat	1	46	(0)	2649427
926	34.1	8.2	1.6	chr3	106428839	106429492	(91866067)	+	L2a	LINE/L2	2699	3405	(21)	2649510
3621	28.8	5.7	6.3	chr3	106702437	106704034	(91591525)	C	ERV3-16A3_I-int	LTR/ERVL	(746)	4480	2892	2649847
186	30.5	1.7	0.0	chr3	106728661	106728719	(91566840)	C	L3	LINE/CR1	(2518)	1581	1522	2649879
245	32.9	1.2	0.0	chr3	106728726	106728804	(91566755)	C	L3	LINE/CR1	(2520)	1579	1500	2649879
18	23.9	0.0	2.2	chr3	107522822	107522867	(90772692)	+	(TG)n	Simple_repeat	1	46	(0)	2651000
285	29.1	10.7	4.8	chr3	108131121	108131286	(90164273)	+	MIRc	SINE/MIR	9	185	(83)	2651872
280	34.2	0.0	4.2	chr3	108131376	108131494	(90164065)	+	L2a	LINE/L2	3312	3425	(1)	2651873
283	27.4	0.0	11.6	chr3	108471881	108471975	(89823584)	+	MIRb	SINE/MIR	64	147	(121)	2652328
367	24.8	1.9	1.9	chr3	109548560	109548666	(88746893)	C	LTR16	LTR/ERVL	(0)	438	332	2654086
1022	28.4	3.1	2.8	chr3	109548748	109549102	(88746457)	C	ERV3-16A3_I-int	LTR/ERVL	(1435)	3791	3436	2654087
1531	14.5	0.0	0.0	chr3	109642359	109642572	(88652987)	+	AluJb	SINE/Alu	84	297	(15)	2654230
5228	9.3	7.5	0.4	chr3	109685079	109685837	(88609722)	+	LTR25	LTR/ERV1	1	817	(27)	2654286
727	23.4	1.4	0.0	chr3	109707945	109708081	(88587478)	+	LTR40b	LTR/ERVL	237	375	(87)	2654311
420	33.8	2.6	0.0	chr3	109927156	109927306	(88368253)	+	L2b	LINE/L2	3221	3375	(0)	2654597
18	15.7	0.0	2.6	chr3	110420330	110420368	(87875191)	+	GA-rich	Low_complexity	1	39	(0)	2655247
1835	18.9	1.1	16.7	chr3	110420468	110420982	(87874577)	+	Tigger2a	DNA/TcMar-Tigger	1	434	(0)	2655248
882	27.3	7.1	0.4	chr3	111581816	111582076	(86713483)	C	LTR16C	LTR/ERVL	(0)	489	210	2656656
2070	24.8	6.5	5.9	chr3	111695264	111695962	(86599597)	C	MER44D	DNA/TcMar-Tigger	(0)	705	2	2656793
278	24.2	10.3	1.3	chr3	111735827	111735915	(86559644)	C	MIRb	SINE/MIR	(158)	110	8	2656845
323	30.4	4.7	9.0	chr3	111737878	111738054	(86557505)	+	AmnSINE1	SINE/5S-Deu-L2	14	182	(393)	2656849
232	30.6	4.3	14.7	chr3	111865531	111865714	(86429845)	C	MIR1_Amn	SINE/MIR	(58)	172	9	2657070
27	0.0	0.0	0.0	chr3	112013800	112013825	(86281734)	+	(TTAT)n	Simple_repeat	1	26	(0)	2657259
496	32.1	13.3	7.2	chr3	112671869	112672409	(85623150)	C	L2b	LINE/L2	(82)	3305	2713	2658159
15	20.5	5.1	0.0	chr3	112676872	112676910	(85618649)	+	(AC)n	Simple_repeat	1	41	(0)	2658165
22376	6.6	1.3	0.0	chr3	112697699	112700649	(85594910)	+	HERVL-int	LTR/ERVL	2667	5654	(0)	2658182
287	31.1	9.0	1.5	chr3	114608353	114608486	(83687073)	C	MER5A	DNA/hAT-Charlie	(44)	145	1	2660967
263	26.2	5.1	3.7	chr3	114624944	114625078	(83670481)	+	LFSINE_Vert	SINE/tRNA	135	271	(188)	2660985
3240	30.0	5.4	4.1	chr3	115436617	115438163	(82857396)	+	ERV3-16A3_I-int	LTR/ERVL	3610	5176	(50)	2662117
615	34.9	11.0	3.2	chr3	115553080	115553920	(82741639)	C	L2a	LINE/L2	(2)	3424	2517	2662272
269	36.6	5.9	3.5	chr3	115554147	115554378	(82741181)	+	L2c	LINE/L2	2933	3170	(205)	2662273
26	23.7	4.1	6.5	chr3	115623333	115623479	(82672080)	+	GA-rich	Low_complexity	1	153	(0)	2662366
250	32.2	1.7	4.2	chr3	115789055	115789174	(82506385)	+	L2b	LINE/L2	3270	3426	(0)	2662595
29	12.6	0.0	0.0	chr3	115789302	115789345	(82506214)	+	(TG)n	Simple_repeat	1	44	(0)	2662596
218	27.7	3.1	8.7	chr3	116000133	116000235	(82295324)	+	MIR1_Amn	SINE/MIR	85	181	(49)	2662889
545	33.9	0.9	2.2	chr3	116000203	116000425	(82295134)	C	MIRb	SINE/MIR	(6)	262	43	2662890
308	22.6	30.3	0.6	chr3	116135309	116135477	(82160082)	C	MIR	SINE/MIR	(12)	250	10	2663082
1447	30.1	2.5	4.3	chr3	116339497	116340004	(81955555)	+	MLT1G3	LTR/ERVL-MaLR	1	544	(51)	2663382
286	36.3	4.2	5.8	chr3	116340056	116340295	(81955264)	+	MIRb	SINE/MIR	18	253	(15)	2663383
2020	12.3	5.6	1.6	chr3	119310418	119310740	(78984819)	+	MER1B	DNA/hAT-Charlie	3	339	(0)	2667354
245	30.7	10.9	1.8	chr3	119637928	119638093	(78657466)	+	L2	LINE/L2	2393	2575	(844)	2667924
462	20.0	15.1	1.5	chr3	122975513	122975649	(75319910)	+	MIRb	SINE/MIR	107	265	(3)	2672904
215	38.2	6.5	0.8	chr3	122975687	122976048	(75319511)	+	L2	LINE/L2	2698	3081	(338)	2672905
464	27.8	11.8	1.6	chr3	123067783	123067965	(75227594)	+	MIRc	SINE/MIR	54	257	(11)	2673094
434	33.9	2.5	4.0	chr3	123677983	123678182	(74617377)	+	MIRb	SINE/MIR	49	245	(23)	2674128
12	24.6	0.0	2.5	chr3	123734229	123734268	(74561291)	+	GA-rich	Low_complexity	1	40	(0)	2674209
714	28.2	11.9	0.0	chr3	124772323	124772595	(73522964)	+	Tigger19a	DNA/TcMar-Tigger	1	310	(13)	2675836
1009	19.2	0.6	0.6	chr3	124860914	124861095	(73434464)	+	AluJb	SINE/Alu	131	312	(0)	2675983
631	21.0	14.7	0.0	chr3	125110544	125110700	(73184859)	C	MER5A	DNA/hAT-Charlie	(0)	189	6	2676450
309	26.7	0.0	3.7	chr3	126782497	126782605	(71512954)	C	MLT1N2	LTR/ERVL-MaLR	(28)	534	430	2679087
259	5.1	7.1	0.0	chr3	126782862	126782900	(71512659)	C	MLT1K	LTR/ERVL-MaLR	(533)	62	21	2679088
797	10.7	0.0	0.0	chr3	126782901	126783012	(71512547)	C	L1PREC2	LINE/L1	(1159)	4987	4876	2679089
383	34.3	3.9	10.0	chr3	126926077	126926377	(71369182)	+	L2c	LINE/L2	3106	3387	(0)	2679286
7622	13.4	6.3	2.5	chr3	127275185	127277040	(71018519)	+	MER52-int	LTR/ERV1	2	1929	(5162)	2679781
1586	18.7	4.0	0.3	chr3	127768003	127768362	(70527197)	+	L1M5	LINE/L1	3333	3706	(2440)	2680631
356	21.7	4.6	1.2	chr3	127768370	127768453	(70527106)	C	MIRb	SINE/MIR	(178)	90	4	2680624
25	23.9	1.9	5.7	chr3	128052314	128052417	(70243142)	+	(GCGGC)n	Simple_repeat	1	106	(0)	2681126
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
15	12.0	0.0	0.0	chr3	128278905	128278931	(70016628)	+	(TGC)n	Simple_repeat	1	27	(0)	2681502
282	28.6	14.1	5.3	chr3	128554137	128554380	(69741179)	C	MLT1K	LTR/ERVL-MaLR	(9)	586	318	2681914
418	26.4	14.7	0.6	chr3	128554423	128554597	(69740962)	C	MLT1K	LTR/ERVL-MaLR	(362)	233	30	2681914
13	16.6	0.0	0.0	chr3	128726204	128726230	(69569329)	+	(GGC)n	Simple_repeat	1	27	(0)	2682345
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
16	14.2	4.7	7.5	chr3	130894016	130894079	(67401480)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	2686147
187	36.4	0.0	0.0	chr3	132134700	132134776	(66160783)	C	L2b	LINE/L2	(217)	3158	3082	2687967
340	16.5	6.0	8.1	chr3	132723331	132723416	(65572143)	C	LTR65	LTR/ERV1	(14)	655	572	2688840
463	31.4	7.0	0.0	chr3	133662278	133662436	(64633123)	C	MIRb	SINE/MIR	(85)	183	13	2690342
197	30.3	0.0	2.9	chr3	133943724	133943791	(64351768)	C	MIR3	SINE/MIR	(2)	206	141	2690708
224	29.3	14.4	2.3	chr3	133944530	133944700	(64350859)	+	MIR3	SINE/MIR	10	204	(4)	2690711
11	29.1	3.7	0.0	chr3	134364168	134364221	(63931338)	+	G-rich	Low_complexity	1	56	(0)	2691340
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
17	31.2	0.0	0.0	chr3	134795323	134795373	(63500186)	+	(CT)n	Simple_repeat	1	51	(0)	2691963
33	29.1	1.0	0.0	chr3	134795373	134795487	(63500072)	+	(CA)n	Simple_repeat	1	116	(0)	2691964
17	31.1	0.0	0.0	chr3	134795374	134795381	(63500178)	+	(CGCTCT)n	Simple_repeat	5	63	(0)	2691965
296	25.3	7.4	5.1	chr3	136142543	136142621	(62152938)	C	MIRb	SINE/MIR	(161)	107	27	2693847
301	36.0	8.1	2.6	chr3	136142657	136142773	(62152786)	+	L2b	LINE/L2	3248	3371	(4)	2693848
630	25.8	6.9	2.1	chr3	136344062	136344255	(61951304)	+	MIR	SINE/MIR	2	205	(57)	2694200
19	17.5	0.0	0.0	chr3	138175002	138175034	(60120525)	+	(T)n	Simple_repeat	1	33	(0)	2697100
501	24.9	0.0	5.2	chr3	138175036	138175247	(60120312)	C	L1MEg	LINE/L1	(4473)	1611	1411	2697101
2636	21.1	4.0	1.1	chr3	138694048	138694588	(59600971)	+	MER68	LTR/ERVL	1	557	(6)	2697943
187	21.4	6.7	1.8	chr3	138774679	138774735	(59520824)	+	AmnSINE1	SINE/5S-Deu-L2	117	176	(399)	2698110
273	24.5	12.2	1.1	chr3	139302689	139302783	(58992776)	C	MIRb	SINE/MIR	(7)	261	155	2699111
277	25.1	2.3	7.7	chr3	139302772	139302927	(58992632)	C	MIRc	SINE/MIR	(17)	213	69	2699112
550	31.5	12.8	1.8	chr3	139344375	139344707	(58950852)	C	L2b	LINE/L2	(1)	3374	3000	2699177
191	30.6	5.8	1.0	chr3	141367464	141367562	(56927997)	C	L3	LINE/CR1	(370)	3729	3626	2702201
526	26.2	5.9	6.4	chr3	141367582	141367785	(56927774)	+	MIR	SINE/MIR	8	210	(52)	2702202
3475	10.6	2.7	4.8	chr3	142501533	142501758	(55793801)	+	L1PA16	LINE/L1	5260	5470	(696)	2704222
16	9.7	0.0	0.0	chr3	142887222	142887243	(55408316)	+	(T)n	Simple_repeat	1	22	(0)	2704853
12	6.9	5.9	5.6	chr3	146544852	146544885	(51750674)	+	(GGAACT)n	Simple_repeat	1	36	(0)	2709708
2110	29.4	4.2	5.4	chr3	146967533	146969043	(51326516)	+	MLT1D-int	LTR/ERVL-MaLR	2	1365	(6)	2710250
2252	12.3	1.0	0.3	chr3	148021289	148021598	(50273961)	C	AluSx	SINE/Alu	(0)	312	1	2711572
2052	19.1	4.0	0.7	chr3	148024043	148024454	(50271105)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2711576
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
41	0.0	0.0	0.0	chr3	150077883	150077917	(48217642)	+	(TG)n	Simple_repeat	1	35	(0)	2714642
1103	22.8	8.0	4.0	chr3	150078087	150078411	(48217148)	C	MamRep4096	DNA/hAT-Tip100	(15)	411	73	2714643
247	11.6	4.5	6.5	chr3	150237811	150237856	(48057703)	C	MamTip2	DNA/hAT-Tip100	(83)	222	178	2714922
12	14.1	3.0	2.9	chr3	150370012	150370044	(47925515)	+	(TTTGAT)n	Simple_repeat	1	34	(0)	2715123
75	8.3	0.0	0.0	chr3	150703722	150703823	(47591736)	+	(CTC)n	Simple_repeat	1	102	(0)	2715698
544	28.2	8.1	7.2	chr3	151305054	151305359	(46990200)	C	MamRTE1	LINE/RTE-BovB	(356)	3456	3148	2716641
12	19.4	4.7	2.2	chr3	152268641	152268683	(46026876)	+	(CGGCTC)n	Simple_repeat	1	45	(0)	2717973
309	28.7	11.4	0.7	chr3	153052059	153052202	(45243357)	C	MIR3	SINE/MIR	(50)	158	3	2719106
1790	13.8	1.4	8.7	chr3	153057869	153058166	(45237393)	C	AluSz	SINE/Alu	(35)	277	2	2719124
519	30.1	0.3	5.1	chr3	156180004	156180194	(42115365)	C	MIR	SINE/MIR	(72)	196	19	2723693
629	33.0	1.6	0.0	chr3	156180178	156180359	(42115200)	C	MIRb	SINE/MIR	(75)	193	9	2723694
18	7.8	3.7	0.0	chr3	156484370	156484396	(41811163)	+	(AG)n	Simple_repeat	1	28	(0)	2724096
280	27.1	2.8	0.0	chr3	157122221	157122290	(41173269)	C	Chap1_Mam	DNA/hAT-Charlie	(224)	118	47	2725008
690	37.7	11.9	3.7	chr3	157333907	157334559	(40961000)	+	MamRTE1	LINE/RTE-BovB	2243	2956	(856)	2725359
776	18.1	5.1	5.1	chr3	158168061	158168235	(40127324)	+	MER58A	DNA/hAT-Charlie	45	219	(5)	2726454
432	25.3	3.7	6.7	chr3	158168267	158168432	(40127127)	+	MLT1H2	LTR/ERVL-MaLR	350	550	(5)	2726455
253	31.6	4.8	3.0	chr3	158725707	158725807	(39569752)	+	MamSINE1	SINE/tRNA-RTE	10	112	(178)	2727190
2452	21.1	4.2	1.5	chr3	159082899	159084247	(39211312)	+	L1MD2	LINE/L1	4920	6340	(19)	2727720
295	32.1	15.3	3.6	chr3	159190326	159190606	(39104953)	C	L2b	LINE/L2	(8)	3367	3048	2727883
15	9.1	0.0	0.0	chr3	159866456	159866479	(38429080)	+	(TTG)n	Simple_repeat	1	24	(0)	2728864
696	25.8	8.9	11.2	chr3	160129350	160129750	(38165809)	+	Tigger18a	DNA/TcMar-Tigger	11	401	(451)	2729318
729	30.1	9.6	2.1	chr3	160473934	160474415	(37821144)	+	L2a	LINE/L2	2083	2604	(815)	2729834
12	13.9	0.0	0.0	chr3	169769521	169769544	(28526015)	+	(GCC)n	Simple_repeat	1	24	(0)	2741786
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
1108	31.0	9.8	0.0	chr3	170702717	170703165	(27592394)	+	HAL1	LINE/L1	4	501	(2006)	2743459
1492	21.7	7.7	5.8	chr3	170703172	170703567	(27591992)	C	MLT1G3	LTR/ERVL-MaLR	(2)	593	190	2743460
2168	28.3	7.5	3.6	chr3	170726384	170727260	(27568299)	+	L2a	LINE/L2	858	1771	(1648)	2743500
375	29.8	1.7	0.0	chr3	170745581	170745694	(27549865)	C	MER117	DNA/hAT-Charlie	(78)	119	4	2743535
551	31.5	5.3	2.5	chr3	170751425	170751662	(27543897)	C	MIR	SINE/MIR	(9)	253	9	2743542
335	27.5	2.7	4.4	chr3	170802431	170802544	(27493015)	+	LTR33	LTR/ERVL	226	337	(178)	2743614
1644	18.1	9.9	0.9	chr3	170802625	170803028	(27492531)	C	MER68	LTR/ERVL	(7)	556	117	2743615
1267	14.4	1.6	0.5	chr3	170865875	170866061	(27429498)	+	AluSz6	SINE/Alu	1	189	(123)	2743733
789	31.6	12.6	1.7	chr3	171029318	171030002	(27265557)	+	L2a	LINE/L2	2655	3425	(1)	2743943
257	35.9	4.1	0.8	chr3	171133067	171133184	(27162375)	+	L3b	LINE/CR1	5064	5185	(47)	2744073
405	26.9	21.5	0.5	chr3	171284410	171284607	(27010952)	+	LTR16A	LTR/ERVL	151	401	(37)	2744290
16	9.8	0.0	0.0	chr3	171284609	171284630	(27010929)	+	(A)n	Simple_repeat	1	22	(0)	2744291
853	17.4	1.2	1.8	chr3	171351997	171352160	(26943399)	C	MER5A1	DNA/hAT-Charlie	(3)	163	1	2744388
266	29.1	12.0	0.0	chr3	171447542	171447644	(26847915)	+	MIRb	SINE/MIR	30	146	(122)	2744535
352	21.3	0.0	2.6	chr3	171685488	171685564	(26609995)	+	MIRb	SINE/MIR	98	172	(96)	2744936
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
15	12.6	0.0	0.0	chr3	172129992	172130018	(26165541)	+	(GAGG)n	Simple_repeat	1	27	(0)	2745651
13	22.6	0.0	0.0	chr3	172140838	172140873	(26154686)	+	(TTATAT)n	Simple_repeat	1	36	(0)	2745665
31	0.0	0.0	0.0	chr3	172658841	172658869	(25636690)	+	(T)n	Simple_repeat	1	29	(0)	2746468
361	27.4	7.1	0.1	chr3	172658998	172659134	(25636425)	C	MIR	SINE/MIR	(72)	158	2	2746469
3012	13.4	4.8	2.9	chr3	172659146	172659637	(25635922)	+	LTR22C0	LTR/ERVK	1	502	(0)	2746470
1436	29.4	4.6	0.9	chr3	174330173	174330615	(23964944)	C	LTR16B2	LTR/ERVL	(2)	460	1	2748797
20	11.0	2.4	2.4	chr3	174330724	174330764	(23964795)	+	(AGAT)n	Simple_repeat	1	42	(0)	2748798
389	30.2	12.6	0.6	chr3	175346904	175347063	(22948496)	C	MIRb	SINE/MIR	(1)	267	86	2750245
412	2.1	0.0	0.0	chr3	177592632	177592679	(20702880)	C	MADE1	DNA/TcMar-Mariner	(32)	48	1	2753520
307	30.2	6.7	4.7	chr3	177977852	177978042	(20317517)	+	MLT1J	LTR/ERVL-MaLR	224	418	(94)	2754054
609	32.8	2.9	1.0	chr3	177978169	177978368	(20317191)	+	MIRb	SINE/MIR	22	225	(43)	2754055
2215	10.8	0.0	4.8	chr3	178308412	178308726	(19986833)	C	AluSx1	SINE/Alu	(12)	300	1	2754517
573	24.4	30.7	2.7	chr3	178308955	178309277	(19986282)	C	MER66A	LTR/ERV1	(36)	519	10	2754518
5359	12.0	1.5	1.0	chr3	179090943	179092016	(19203543)	+	L1PA16	LINE/L1	5083	6166	(0)	2755609
23	16.7	7.3	4.8	chr3	179653052	179653169	(18642390)	+	(GCCCGCT)n	Simple_repeat	1	120	(0)	2756626
193	33.1	4.4	4.4	chr3	184133940	184134075	(14161484)	C	L3b	LINE/CR1	(242)	4990	4855	2764087
329	27.1	19.2	3.5	chr3	184134641	184134853	(14160706)	+	MIRb	SINE/MIR	10	267	(1)	2764088
31	0.0	0.0	0.0	chr3	184174586	184174619	(14120940)	+	(A)n	Simple_repeat	1	34	(0)	2764151
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
7301	16.2	1.4	1.9	chr3	184448915	184449435	(13846124)	C	ERVL-B4-int	LTR/ERVL	(1062)	4652	4120	2764651
17	12.7	0.0	0.0	chr3	185658702	185658727	(12636832)	+	(AC)n	Simple_repeat	1	26	(0)	2766836
3621	21.4	5.6	1.9	chr3	185728811	185729634	(12565925)	+	Charlie1a	DNA/hAT-Charlie	6	861	(594)	2766972
1791	16.8	3.1	2.0	chr3	185729633	185729985	(12565574)	+	Charlie1a	DNA/hAT-Charlie	890	1246	(209)	2766973
23	18.9	0.0	0.0	chr3	185781774	185781821	(12513738)	+	(TGTG)n	Simple_repeat	1	48	(0)	2767076
236	35.5	13.3	0.8	chr3	185782263	185782387	(12513172)	C	MIRb	SINE/MIR	(117)	151	9	2767077
1057	25.3	15.7	1.7	chr3	185807582	185807995	(12487564)	+	MLT1F	LTR/ERVL-MaLR	16	498	(50)	2767127
785	19.3	0.0	2.2	chr3	185807999	185808133	(12487426)	+	FLAM_A	SINE/Alu	1	132	(10)	2767128
1415	20.2	6.1	3.8	chr3	185907263	185907616	(12387943)	C	MLT1F	LTR/ERVL-MaLR	(8)	571	213	2767365
2487	10.0	0.3	0.0	chr3	185907622	185907922	(12387637)	C	AluSz	SINE/Alu	(10)	302	1	2767366
925	16.1	0.0	0.0	chr3	185907925	185908054	(12387505)	C	FLAM_C	SINE/Alu	(13)	130	1	2767367
468	36.4	3.0	8.9	chr3	186021885	186022198	(12273361)	C	L2b	LINE/L2	(4)	3371	3077	2767607
255	14.4	6.6	0.6	chr3	187738118	187738188	(10557371)	C	MIR3	SINE/MIR	(132)	98	24	2770629
13	8.6	0.0	6.9	chr3	187745118	187745146	(10550413)	+	(AAT)n	Simple_repeat	1	29	(0)	2770634
36	23.5	0.0	0.0	chr3	187745323	187745401	(10550158)	+	(AGC)n	Simple_repeat	1	79	(0)	2770635
225	34.2	4.9	1.9	chr3	188263328	188263485	(10032074)	+	L2b	LINE/L2	2766	2928	(491)	2771590
12	18.1	0.0	3.0	chr3	188266015	188266047	(10029512)	+	(TGCTCC)n	Simple_repeat	1	33	(0)	2771597
13	5.2	0.0	0.0	chr3	188266176	188266195	(10029364)	+	(CAG)n	Simple_repeat	1	20	(0)	2771598
263	33.1	8.6	6.7	chr3	188286367	188286560	(10008999)	+	MIRc	SINE/MIR	9	206	(62)	2771642
187	25.0	10.7	6.1	chr3	188295256	188295370	(10000189)	C	L3	LINE/CR1	(127)	3972	3852	2771659
245	30.9	2.4	3.6	chr3	188432898	188432981	(9862578)	C	L2a	LINE/L2	(0)	3426	3344	2771901
1046	21.1	1.8	0.5	chr3	188468268	188468481	(9827078)	C	MER58A	DNA/hAT-Charlie	(3)	221	5	2771963
230	35.3	8.0	4.8	chr3	188558324	188558636	(9736923)	+	L2c	LINE/L2	3049	3386	(1)	2772099
345	29.9	15.7	2.2	chr3	188795981	188796390	(9499169)	C	L2a	LINE/L2	(0)	3426	2876	2772517
16	9.7	0.0	0.0	chr3	188900824	188900845	(9394714)	+	(T)n	Simple_repeat	1	22	(0)	2772680
13	22.8	2.4	0.0	chr3	188900999	188901039	(9394520)	+	(TTTTG)n	Simple_repeat	1	42	(0)	2772681
196	24.1	1.1	17.9	chr3	190117041	190117146	(8178413)	C	MIR1_Amn	SINE/MIR	(129)	101	14	2774603
2302	11.1	0.0	0.0	chr3	190185020	190185307	(8110252)	C	AluSp	SINE/Alu	(25)	288	1	2774712
1327	9.6	0.9	11.9	chr3	190185308	190185359	(8110200)	C	AluJr4	SINE/Alu	(185)	127	86	2774711
192	18.4	5.0	0.0	chr3	190185384	190185421	(8110138)	+	MER5A	DNA/hAT-Charlie	148	187	(2)	2774713
560	27.4	0.6	0.6	chr3	190232029	190232186	(8063373)	C	MamGypsy2-I	LTR/Gypsy	(2097)	2069	1912	2774797
329	26.1	6.0	9.2	chr3	190232214	190232386	(8063173)	C	MamGypsy2-I	LTR/Gypsy	(3999)	167	1	2774797
2248	12.9	4.1	0.8	chr3	191425336	191425687	(6869872)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2776503
469	29.4	11.8	4.7	chr3	193872561	193872771	(4422788)	+	MIRb	SINE/MIR	27	254	(14)	2780150
18	10.7	3.3	0.0	chr3	194134845	194134874	(4160685)	+	(AC)n	Simple_repeat	1	31	(0)	2780602
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
249	35.2	4.5	0.9	chr3	194527133	194527238	(3768321)	+	L2c	LINE/L2	3047	3156	(231)	2781297
20	11.6	0.0	0.0	chr3	194527484	194527512	(3768047)	+	(T)n	Simple_repeat	1	29	(0)	2781298
1883	11.7	0.4	0.0	chr3	194527521	194527769	(3767790)	C	AluSz	SINE/Alu	(62)	250	1	2781299
4619	10.2	1.5	0.3	chr3	194575118	194575783	(3719776)	C	LTR8	LTR/ERV1	(17)	674	1	2781418
2030	7.7	3.7	0.0	chr3	194583529	194583814	(3711745)	+	AluSx4	SINE/Alu	1	297	(13)	2781439
23	8.0	5.0	0.0	chr3	194583890	194583929	(3711630)	+	(CGG)n	Simple_repeat	1	42	(0)	2781440
14	14.6	0.0	3.1	chr3	194593344	194593375	(3702184)	+	(ATT)n	Simple_repeat	1	32	(0)	2781456
16	18.7	6.1	0.0	chr3	195543395	195543443	(2752116)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2783235
18	20.1	4.4	6.4	chr3	196712477	196712566	(1582993)	+	(TCCGGCG)n	Simple_repeat	1	94	(0)	2785607
15	15.2	0.0	9.4	chr3	196867773	196867825	(1427734)	+	G-rich	Low_complexity	1	53	(0)	2785946
1973	13.4	1.0	1.9	chr3	197395437	197395743	(899816)	+	AluJo	SINE/Alu	1	304	(8)	2786842
1841	11.7	0.4	0.4	chr3	197421807	197422055	(873504)	C	AluSx1	SINE/Alu	(59)	253	5	2786883
1194	20.8	2.5	9.7	chr3	197422056	197422178	(873381)	+	MER33	DNA/hAT-Charlie	212	324	(0)	2786882
1279	17.7	12.4	0.8	chr3	197958087	197958329	(337230)	C	AluJr	SINE/Alu	(27)	285	11	2787893
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
43	30.8	0.8	0.0	chr4	337403	337532	(189877023)	+	(TG)n	Simple_repeat	1	131	(0)	2788954
15	11.7	10.2	1.9	chr4	2242081	2242129	(187972426)	+	(GCCTCGCGC)n	Simple_repeat	1	54	(0)	2791310
249	36.2	1.1	2.1	chr4	7650179	7650274	(182564281)	+	MIRb	SINE/MIR	92	186	(82)	2800482
639	24.9	5.1	3.0	chr4	7828620	7828854	(182385701)	C	MIR	SINE/MIR	(2)	266	21	2800730
16	0.0	0.0	0.0	chr4	7831394	7831411	(182383144)	+	(A)n	Simple_repeat	1	18	(0)	2800735
16	0.0	0.0	0.0	chr4	7842687	7842703	(182371852)	+	(A)n	Simple_repeat	1	17	(0)	2800758
515	29.9	7.4	9.2	chr4	7844480	7844672	(182369883)	+	L2b	LINE/L2	3171	3370	(5)	2800760
221	30.3	16.3	4.2	chr4	7857243	7857435	(182357120)	C	L3b	LINE/CR1	(119)	5113	4893	2800781
239	33.3	3.5	1.8	chr4	7857460	7857572	(182356983)	C	Plat_L3	LINE/CR1	(359)	3227	3113	2800782
434	26.5	4.9	3.7	chr4	7960628	7960788	(182253767)	+	MIR	SINE/MIR	21	183	(79)	2801000
2681	12.9	3.5	0.9	chr4	7960792	7961214	(182253341)	+	LTR47B4	LTR/ERVL	1	434	(0)	2801001
17	5.0	0.0	0.0	chr4	7969709	7969729	(182244826)	+	(TC)n	Simple_repeat	1	21	(0)	2801015
46	0.0	0.0	0.0	chr4	7969731	7969769	(182244786)	+	(AC)n	Simple_repeat	1	39	(0)	2801016
12	22.6	2.5	8.6	chr4	8428255	8428333	(181786222)	+	(CCTCGCT)n	Simple_repeat	1	81	(0)	2801733
868	23.5	7.5	3.9	chr4	13918003	13918308	(176296247)	+	MLT1H	LTR/ERVL-MaLR	1	318	(231)	2810095
318	33.1	5.3	1.8	chr4	13920819	13920981	(176293574)	C	MIRc	SINE/MIR	(7)	261	93	2810104
23	19.3	0.0	0.0	chr4	13921217	13921265	(176293290)	+	(GTGTGT)n	Simple_repeat	1	49	(0)	2810105
367	35.3	3.2	0.0	chr4	13980428	13980577	(176233978)	C	Tigger13a	DNA/TcMar-Tigger	(612)	159	5	2810217
22	18.4	0.0	0.0	chr4	14111948	14111986	(176102569)	+	A-rich	Low_complexity	1	39	(0)	2810432
355	33.0	7.5	8.8	chr4	15303132	15303607	(174910948)	C	L2c	LINE/L2	(0)	3387	2919	2812409
764	25.3	8.4	6.5	chr4	15690563	15690887	(174523668)	+	LTR40A1	LTR/ERVL	160	491	(93)	2813068
280	32.2	14.1	6.2	chr4	15921620	15921949	(174292606)	+	L2c	LINE/L2	1665	2018	(1401)	2813473
293	28.7	13.4	0.8	chr4	16667312	16667509	(173547046)	C	MIR	SINE/MIR	(22)	246	16	2814713
260	28.2	1.4	0.0	chr4	16667696	16667766	(173546789)	+	MER117	DNA/hAT-Charlie	72	143	(54)	2814714
13	26.5	0.0	3.8	chr4	16667829	16667881	(173546674)	+	(GGCAT)n	Simple_repeat	1	53	(0)	2814715
332	33.3	8.6	5.4	chr4	17067085	17067252	(173147303)	+	MER91A	DNA/hAT-Tip100	1	174	(22)	2815486
203	31.4	21.4	1.4	chr4	19239445	19239586	(170974969)	+	MIRb	SINE/MIR	22	199	(69)	2819210
190	32.4	9.7	2.8	chr4	19299087	19299229	(170915326)	C	L2a	LINE/L2	(2)	3424	3271	2819292
3807	18.4	1.5	1.0	chr4	19945651	19946380	(170268175)	+	MER50	LTR/ERV1	1	734	(0)	2820254
15	18.0	2.5	2.4	chr4	19983111	19983150	(170231405)	+	(TAC)n	Simple_repeat	1	41	(0)	2820300
244	37.0	4.6	4.6	chr4	20195537	20195709	(170018846)	+	L2a	LINE/L2	2522	2694	(725)	2820611
16599	18.2	0.5	1.1	chr4	20195710	20198782	(170015773)	+	HERVH-int	LTR/ERV1	4660	7713	(0)	2820612
420	22.3	4.6	0.0	chr4	20203868	20203970	(170010585)	+	MIR	SINE/MIR	82	189	(73)	2820620
380	33.7	3.5	1.8	chr4	21802453	21802621	(168411934)	C	MIRc	SINE/MIR	(88)	180	9	2823086
221	33.3	2.5	4.1	chr4	22190973	22191094	(168023461)	+	L2c	LINE/L2	3108	3227	(160)	2823627
5505	12.0	4.0	0.0	chr4	22191095	22191879	(168022676)	+	LTR1B1	LTR/ERV1	1	818	(0)	2823628
196	38.8	4.0	2.3	chr4	22385650	22385823	(167828732)	+	MIR3	SINE/MIR	29	205	(3)	2823891
591	26.3	16.8	6.2	chr4	24778783	24779260	(165435295)	+	MLT1H1	LTR/ERVL-MaLR	56	553	(2)	2827736
33	0.0	2.9	0.0	chr4	25160484	25160518	(165054037)	+	(AAAAC)n	Simple_repeat	1	36	(0)	2828388
505	28.6	10.8	1.9	chr4	25908565	25908824	(164305731)	C	MLT1M	LTR/ERVL-MaLR	(263)	409	124	2829988
2747	5.5	0.7	0.3	chr4	26318718	26319025	(163895530)	+	AluY	SINE/Alu	2	310	(1)	2830847
31	28.6	1.8	0.9	chr4	26319397	26319507	(163895048)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	2830848
1993	18.1	5.0	2.2	chr4	26782135	26782540	(163432015)	C	LTR52	LTR/ERVL	(3)	418	1	2831593
544	27.1	6.8	5.3	chr4	26782541	26782577	(163431978)	C	L1ME4a	LINE/L1	(218)	5906	5869	2831592
15	0.0	8.0	0.0	chr4	28288176	28288200	(161926355)	+	(TGGAA)n	Simple_repeat	1	27	(0)	2833790
572	18.9	7.7	0.0	chr4	38060747	38060878	(152153677)	C	MER5A1	DNA/hAT-Charlie	(0)	166	24	2847152
12	19.5	2.9	0.0	chr4	40057268	40057302	(150157253)	+	(AGGCCG)n	Simple_repeat	1	36	(0)	2851170
259	29.8	3.7	1.9	chr4	40909265	40909370	(149305185)	C	MamRep605	LTR?	(241)	608	501	2853091
2268	13.9	4.2	3.1	chr4	41141611	41141966	(149072589)	C	THE1B	LTR/ERVL-MaLR	(4)	360	1	2853518
501	29.6	6.3	2.3	chr4	41141967	41142134	(149072421)	C	MLT1K	LTR/ERVL-MaLR	(347)	248	2	2853517
22	13.7	3.1	6.1	chr4	41142738	41142801	(149071754)	+	GA-rich	Low_complexity	1	66	(0)	2853519
433	32.7	14.1	0.0	chr4	41178647	41178848	(149035707)	C	MIRc	SINE/MIR	(31)	237	3	2853595
2250	23.5	8.5	0.4	chr4	43339259	43339767	(146874788)	+	MLT1F2	LTR/ERVL-MaLR	7	560	(0)	2856846
22	15.8	2.4	0.0	chr4	43339829	43339870	(146874685)	+	(TC)n	Simple_repeat	1	43	(0)	2856847
547	27.8	11.7	5.3	chr4	43339872	43340373	(146874182)	C	HAL1	LINE/L1	(1052)	1455	895	2856841
307	32.8	7.5	4.1	chr4	47213796	47213989	(143000566)	C	L1MC4	LINE/L1	(5491)	724	524	2861918
326	30.5	8.4	0.6	chr4	48909844	48910018	(141304537)	+	L2c	LINE/L2	3020	3209	(178)	2864616
1281	28.4	9.4	0.0	chr4	48939616	48940087	(141274468)	C	L1ME5	LINE/L1	(115)	6079	5559	2864673
319	26.2	1.2	1.2	chr4	53541904	53541988	(136672567)	+	CR1-12_AMi	LINE/CR1	327	411	(203)	2867844
487	34.0	0.0	1.4	chr4	53688106	53688251	(136526304)	+	MIRb	SINE/MIR	17	160	(108)	2868066
295	28.4	9.5	7.8	chr4	53688570	53688775	(136525780)	C	L3	LINE/CR1	(1)	4098	3889	2868067
14	9.6	0.0	0.0	chr4	54064473	54064495	(136150060)	+	(CCG)n	Simple_repeat	1	23	(0)	2868661
34	24.0	0.0	0.0	chr4	54064666	54064748	(136149807)	+	G-rich	Low_complexity	1	83	(0)	2868662
194	23.5	2.3	12.4	chr4	54165478	54165574	(136048981)	+	L2c	LINE/L2	3238	3324	(63)	2868853
265	34.6	6.7	4.5	chr4	54165561	54165781	(136048774)	C	L2c	LINE/L2	(0)	3387	3144	2868854
423	32.4	2.8	2.8	chr4	54525806	54525986	(135688569)	+	MLT1J	LTR/ERVL-MaLR	208	388	(124)	2869461
284	31.6	13.6	0.7	chr4	56387675	56387827	(133826728)	+	MIRc	SINE/MIR	32	207	(61)	2872524
33	0.0	0.0	0.0	chr4	56641464	56641494	(133573061)	+	(T)n	Simple_repeat	1	31	(0)	2872989
14	0.0	8.3	0.0	chr4	56641526	56641549	(133573006)	+	(AAGA)n	Simple_repeat	1	26	(0)	2872990
225	22.9	4.7	1.6	chr4	62119506	62119567	(128094988)	+	MER135	DNA	7	70	(158)	2880374
18	21.1	1.7	4.9	chr4	68349770	68349829	(121864726)	+	(CCG)n	Simple_repeat	1	61	(0)	2888211
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
1686	24.7	7.0	3.1	chr4	72315228	72315708	(117898847)	+	MLT1D	LTR/ERVL-MaLR	5	505	(0)	2893338
585	32.0	1.4	2.4	chr4	72418545	72418752	(117795803)	C	MLT1J2	LTR/ERVL-MaLR	(239)	209	4	2893481
335	28.6	9.4	0.0	chr4	72418760	72418913	(117795642)	+	L2b	LINE/L2	2819	2988	(431)	2893482
806	17.6	8.8	0.0	chr4	72971393	72971553	(117243002)	+	MER58B	DNA/hAT-Charlie	2	178	(163)	2894162
2985	19.3	2.3	2.7	chr4	72971554	72972247	(117242308)	+	Tigger7	DNA/TcMar-Tigger	1	705	(0)	2894163
27	20.4	1.6	0.0	chr4	73258763	73258824	(116955731)	+	(GCC)n	Simple_repeat	1	63	(0)	2894657
23	25.4	1.4	1.4	chr4	73258825	73258834	(116955721)	+	(GCCACC)n	Simple_repeat	1	73	(0)	2894658
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
1194	14.1	4.3	0.0	chr4	74284172	74284369	(115930186)	+	Tigger6b	DNA/TcMar-Tigger	1059	1265	(332)	2895959
1727	4.1	0.1	1.8	chr4	74284370	74284678	(115929877)	C	L1PA5	LINE/L1	(690)	5464	5159	2895960
5422	4.5	0.6	0.1	chr4	74284679	74285349	(115929206)	+	L1PA5	LINE/L1	5477	6150	(4)	2895960
187	36.9	3.7	3.7	chr4	76206580	76206686	(114007869)	C	L2a	LINE/L2	(4)	3371	3265	2898888
196	37.9	7.0	3.3	chr4	78298509	78298688	(111915867)	+	MamRTE1	LINE/RTE-BovB	2369	2555	(1257)	2901967
311	37.8	6.0	6.7	chr4	78298758	78299238	(111915317)	C	L2a	LINE/L2	(3)	3423	2910	2901968
1864	23.9	8.3	4.7	chr4	78560192	78560876	(111653679)	C	MER21C	LTR/ERVL	(122)	816	9	2902314
448	21.5	7.5	5.0	chr4	78560980	78561160	(111653395)	+	Charlie19a	DNA/hAT-Charlie	195	380	(6)	2902315
258	25.3	1.2	7.1	chr4	80069225	80069309	(110145246)	+	Tigger19b	DNA/TcMar-Tigger	448	527	(23)	2904348
2209	19.1	9.5	3.9	chr4	80237791	80238308	(109976247)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	2904583
1354	15.8	13.9	0.0	chr4	82421834	82422086	(107792469)	C	AluSz6	SINE/Alu	(18)	294	1	2907599
1598	16.5	5.9	0.4	chr4	82422130	82422401	(107792154)	C	AluJb	SINE/Alu	(24)	288	1	2907600
2730	17.2	5.1	3.1	chr4	82785149	82785701	(107428854)	+	MER34B	LTR/ERV1	1	565	(0)	2908237
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
221	28.5	13.4	8.8	chr4	82975853	82976062	(107238493)	C	L2c	LINE/L2	(133)	3254	3030	2908581
300	21.4	14.3	0.0	chr4	83034764	83034847	(107179708)	+	MER5C	DNA/hAT-Charlie	216	313	(0)	2908719
227	37.5	3.2	0.8	chr4	83112950	83113070	(107101485)	C	MER5A	DNA/hAT-Charlie	(0)	189	66	2908877
1735	17.1	0.3	4.0	chr4	83359080	83359383	(106855172)	+	AluJr	SINE/Alu	9	301	(11)	2909371
228	20.3	16.9	0.0	chr4	83359423	83359491	(106855064)	+	MamRep1151	LTR?	607	689	(20)	2909370
403	32.5	3.0	4.0	chr4	83855185	83855383	(106359172)	C	MER117	DNA/hAT-Charlie	(0)	197	1	2910314
312	29.4	17.3	3.5	chr4	86338892	86339060	(103875495)	C	MIRb	SINE/MIR	(36)	232	36	2913676
876	20.5	3.7	0.0	chr4	88600278	88600487	(101614068)	C	Tigger17	DNA/TcMar-Tigger	(23)	2650	2433	2917447
2080	15.6	1.8	1.8	chr4	88600489	88600872	(101613683)	C	Tigger17c	DNA/TcMar-Tigger	(479)	709	326	2917448
270	30.4	11.7	1.2	chr4	89753963	89754122	(100460433)	C	MamSINE1	SINE/tRNA-RTE	(11)	279	101	2919078
538	29.0	13.6	6.1	chr4	92234057	92234908	(97979647)	C	L1ME5	LINE/L1	(1)	6193	5268	2922020
538	29.7	12.2	7.2	chr4	95106045	95106741	(95107814)	C	L2	LINE/L2	(343)	3076	2340	2926011
844	25.3	11.1	5.4	chr4	98626335	98626986	(91587569)	+	L2a	LINE/L2	2735	3426	(0)	2930419
500	24.3	14.8	12.7	chr4	98654027	98654309	(91560246)	+	MLT1G3	LTR/ERVL-MaLR	288	579	(0)	2930452
15	17.5	4.6	5.9	chr4	101346054	101346118	(88868437)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	2934244
21	9.4	0.0	0.0	chr4	101346184	101346217	(88868338)	+	(AGGGGG)n	Simple_repeat	1	34	(0)	2934245
446	28.2	13.5	5.7	chr4	101357001	101357372	(88857183)	C	MLT1I	LTR/ERVL-MaLR	(3)	408	3	2934263
869	23.9	17.3	2.6	chr4	101977079	101977421	(88237134)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	8	2935042
194	20.4	5.3	0.0	chr4	102868710	102868763	(87345792)	C	MIRc	SINE/MIR	(14)	254	198	2936282
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
430	35.1	6.7	3.3	chr4	105092250	105092641	(85121914)	+	ERVL-E-int	LTR/ERVL	729	1134	(4092)	2939014
463	39.4	0.7	2.5	chr4	105092661	105092946	(85121609)	+	ERVL-E-int	LTR/ERVL	1215	1495	(3501)	2939014
2228	17.5	0.6	0.0	chr4	105399772	105400125	(84814430)	+	Tigger7	DNA/TcMar-Tigger	1	356	(2135)	2939408
273	24.7	5.2	0.0	chr4	106583824	106583896	(83630659)	C	UCON51	LTR?	(3)	247	171	2941006
13	18.9	0.0	0.0	chr4	108700340	108700369	(81514186)	+	(TTCA)n	Simple_repeat	1	30	(0)	2943916
188	26.7	0.0	0.0	chr4	108700376	108700420	(81514135)	C	L2c	LINE/L2	(1)	3386	3342	2943917
730	30.2	12.3	1.6	chr4	110163159	110163521	(80051034)	+	L2a	LINE/L2	3016	3422	(4)	2946069
219	26.9	7.2	3.7	chr4	113785036	113785116	(76429439)	+	L2c	LINE/L2	3268	3351	(36)	2951288
354	25.0	10.3	0.9	chr4	114005939	114006043	(76208512)	+	LTR90A	LTR	769	884	(92)	2951561
263	35.6	2.7	8.2	chr4	118290058	118290216	(71924339)	C	L2b	LINE/L2	(1)	3374	3225	2956665
187	29.3	11.8	0.0	chr4	118339590	118339664	(71874891)	C	Tigger19b	DNA/TcMar-Tigger	(2)	548	464	2956742
244	28.8	2.4	0.0	chr4	118339670	118339749	(71874806)	C	MamRep434	DNA/TcMar-Tigger	(5)	421	340	2956743
238	34.9	2.4	3.8	chr4	119103380	119103540	(71111015)	+	MIRc	SINE/MIR	28	190	(40)	2957973
248	25.5	10.2	0.0	chr4	119518504	119518596	(70695959)	C	MIR	SINE/MIR	(35)	233	105	2958578
23	26.4	1.0	5.0	chr4	121697004	121697102	(68517453)	+	(CGGCC)n	Simple_repeat	1	100	(0)	2961412
386	25.6	3.8	0.0	chr4	121791441	121791554	(68423001)	+	MLT1A	LTR/ERVL-MaLR	5	122	(306)	2961577
614	18.2	0.8	2.0	chr4	121791599	121791738	(68422817)	+	MLT1A	LTR/ERVL-MaLR	255	396	(0)	2961577
216	27.7	0.0	0.0	chr4	121791782	121791828	(68422727)	C	MIRb	SINE/MIR	(195)	73	27	2961578
14	13.1	11.5	1.7	chr4	121823742	121823793	(68390762)	+	(CAGCC)n	Simple_repeat	1	58	(0)	2961635
736	26.0	1.3	5.7	chr4	122763955	122764199	(67450356)	+	L1ME3A	LINE/L1	5894	6127	(46)	2962966
342	33.7	2.1	0.0	chr4	122764332	122764426	(67450129)	+	CR1-L3A_Croc	LINE/CR1	4048	4144	(144)	2962976
397	30.5	14.0	6.1	chr4	123412798	123413059	(66801496)	C	L2c	LINE/L2	(146)	3241	2956	2963928
181	33.3	8.9	3.4	chr4	123892902	123893050	(66321505)	+	L3b	LINE/CR1	4779	4936	(296)	2964620
18	13.6	3.7	5.4	chr4	124712247	124712300	(65502255)	+	(CTCCCG)n	Simple_repeat	1	56	(0)	2965643
23	24.2	1.6	0.0	chr4	124712431	124712493	(65502062)	+	(CCG)n	Simple_repeat	1	64	(0)	2965644
2870	15.6	4.8	0.8	chr4	124943055	124943558	(65270997)	C	Tigger7	DNA/TcMar-Tigger	(1966)	525	1	2965941
1667	28.1	7.5	2.5	chr4	124980260	124980777	(65233778)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	7	2965997
3473	32.7	6.7	4.6	chr4	128323208	128323536	(61891019)	+	L2a	LINE/L2	185	531	(2888)	2970576
500	27.4	0.0	0.7	chr4	128358419	128358554	(61856001)	C	UCON28a	Unknown	(507)	300	166	2970636
250	31.8	3.7	8.5	chr4	128517959	128518099	(61696456)	+	AmnSINE1	SINE/5S-Deu-L2	362	495	(80)	2970836
599	28.2	12.0	2.5	chr4	128529286	128529525	(61685030)	C	L2c	LINE/L2	(6)	3381	3116	2970856
61	0.0	1.7	1.6	chr4	128553015	128553074	(61661481)	+	(CT)n	Simple_repeat	1	61	(0)	2970885
796	32.2	4.9	2.2	chr4	128601304	128601662	(61612893)	C	MamRTE1	LINE/RTE-BovB	(331)	3481	3113	2970966
12	4.5	4.0	3.9	chr4	133149334	133149358	(57065197)	+	(AGGA)n	Simple_repeat	1	26	(0)	2976650
6285	21.2	3.5	4.2	chr4	137213523	137215075	(52999480)	+	L1MC3	LINE/L1	6222	7763	(22)	2981416
18	4.2	0.0	0.0	chr4	138242309	138242333	(51972222)	+	(CTG)n	Simple_repeat	1	25	(0)	2982633
853	17.4	5.8	0.6	chr4	138897732	138897910	(51316645)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2983521
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
188	31.2	5.9	1.2	chr4	143667646	143667726	(46546829)	C	OldhAT1	DNA/hAT-Ac	(451)	2397	2313	2990601
644	20.1	1.4	2.7	chr4	143782821	143782968	(46431587)	+	MER5A1	DNA/hAT-Charlie	21	166	(0)	2990744
18	21.7	2.6	6.2	chr4	145733135	145733212	(44481343)	+	(GCCC)n	Simple_repeat	1	80	(0)	2993328
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
261	29.0	9.9	8.5	chr4	147577998	147578389	(42636166)	+	MLT1N2	LTR/ERVL-MaLR	4	479	(83)	2995813
784	23.8	6.4	4.8	chr4	147578521	147578714	(42635841)	+	LTR37A	LTR/ERV1	43	248	(178)	2995814
640	25.7	5.0	2.2	chr4	147714854	147715084	(42499471)	C	L1ME4a	LINE/L1	(272)	5852	5615	2996094
1042	17.1	5.6	2.5	chr4	147773947	147774186	(42440369)	+	MIR	SINE/MIR	15	262	(0)	2996222
656	35.6	12.5	3.9	chr4	148007544	148008309	(42206246)	C	L3	LINE/CR1	(41)	4058	3218	2996579
12	15.3	5.3	2.5	chr4	149164234	149164271	(41050284)	+	A-rich	Low_complexity	1	40	(0)	2998057
573	22.7	3.4	0.7	chr4	150146232	150146373	(40068182)	+	MER5A1	DNA/hAT-Charlie	1	146	(20)	2999348
493	22.1	0.7	4.2	chr4	155604557	155604698	(34609857)	C	L1MC5a	LINE/L1	(829)	1948	1812	3007666
231	29.5	6.5	0.0	chr4	156476377	156476505	(33738050)	C	L2a	LINE/L2	(69)	3357	3220	3008847
585	36.1	5.3	7.7	chr4	156547105	156547933	(33666622)	+	L2b	LINE/L2	2575	3374	(1)	3008930
349	34.6	3.2	8.3	chr4	156771367	156771631	(33442924)	+	UCON8	DNA	5	255	(860)	3009230
249	40.1	6.5	3.5	chr4	156773922	156774262	(33440293)	+	L2	LINE/L2	2652	3003	(416)	3009233
1918	12.3	6.0	6.3	chr4	156933632	156934013	(33280542)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3009443
3265	18.3	2.3	3.3	chr4	156934014	156934105	(33280450)	+	Tigger17a	DNA/TcMar-Tigger	364	456	(198)	3009442
6802	14.9	2.4	1.6	chr4	156934106	156934984	(33279571)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	339	3009444
264	31.6	9.4	3.1	chr4	156946661	156946820	(33267735)	+	MIR3	SINE/MIR	14	184	(24)	3009464
32	7.8	0.0	0.0	chr4	156949430	156949470	(33265085)	+	(TC)n	Simple_repeat	1	41	(0)	3009468
275	26.1	5.5	0.0	chr4	158015342	158015410	(32199145)	+	MLT1J2	LTR/ERVL-MaLR	72	144	(304)	3010816
324	33.8	13.2	0.0	chr4	158015424	158015574	(32198981)	C	MER5A	DNA/hAT-Charlie	(6)	183	10	3010817
315	26.8	11.6	2.1	chr4	158139004	158139190	(32075365)	C	MIRb	SINE/MIR	(44)	224	18	3010960
222	32.4	1.3	3.9	chr4	158139249	158139325	(32075230)	+	L2b	LINE/L2	3296	3370	(5)	3010961
656	18.1	14.1	5.4	chr4	158139542	158139780	(32074775)	C	Charlie1a	DNA/hAT-Charlie	(0)	1455	1193	3010962
224	32.8	0.8	5.7	chr4	158161832	158161954	(32052601)	+	L2c	LINE/L2	2795	2911	(508)	3010995
642	27.5	6.3	1.2	chr4	158996518	158996771	(31217784)	C	MLT1L	LTR/ERVL-MaLR	(22)	588	321	3012195
427	32.0	0.7	0.7	chr4	158996790	158996937	(31217618)	C	MLT1L	LTR/ERVL-MaLR	(331)	279	132	3012195
2667	14.6	0.7	0.0	chr4	161566305	161566728	(28647827)	C	L1P4	LINE/L1	(359)	5807	5381	3015499
233	23.7	7.0	0.0	chr4	161714031	161714123	(28500432)	C	L1M5	LINE/L1	(683)	5440	5341	3015709
1089	30.2	15.3	3.0	chr4	161936348	161937239	(28277316)	+	HAL1	LINE/L1	16	1036	(1471)	3016021
2328	8.3	0.3	0.3	chr4	163167011	163167299	(27047256)	+	AluSg	SINE/Alu	1	289	(21)	3017677
13396	19.6	5.7	1.5	chr4	166434101	166436782	(23777773)	+	ERVL-B4-int	LTR/ERVL	2914	5714	(0)	3022388
2427	10.0	0.0	0.0	chr4	168137960	168138260	(22076295)	C	AluSc8	SINE/Alu	(10)	301	1	3024417
5226	14.1	0.7	2.3	chr4	168138261	168138460	(22076095)	C	L1PB4	LINE/L1	(671)	5485	5290	3024416
4709	15.6	1.2	0.7	chr4	168138457	168139278	(22075277)	C	L1P4	LINE/L1	(1357)	4789	3964	3024418
698	29.8	2.4	5.8	chr4	168636503	168636554	(21578001)	C	MIRc	SINE/MIR	(223)	45	4	3025091
259	25.9	4.5	1.2	chr4	168636568	168636653	(21577902)	+	MIR3	SINE/MIR	108	196	(12)	3025093
269	32.1	4.4	0.0	chr4	168636660	168636769	(21577786)	C	CR1-3_Croc	LINE/CR1	(21)	3584	3462	3025094
249	30.6	8.1	3.3	chr4	168636944	168637095	(21577460)	+	L3b	LINE/CR1	4782	4941	(291)	3025095
215	32.9	0.0	0.0	chr4	168796515	168796602	(21417953)	+	L2c	LINE/L2	3334	3424	(2)	3025346
286	25.2	3.6	5.3	chr4	168796609	168796721	(21417834)	+	Helitron2Na_Mam	RC?/Helitron?	172	282	(42)	3025347
13	11.3	0.0	12.2	chr4	169165194	169165242	(21049313)	+	(CTGCC)n	Simple_repeat	1	49	(0)	3025915
370	33.1	6.4	5.1	chr4	169225144	169225436	(20989119)	C	L2a	LINE/L2	(854)	2565	2269	3026002
190	30.8	10.4	5.3	chr4	169225474	169225847	(20988708)	C	L2a	LINE/L2	(1300)	2119	1725	3026002
310	29.6	1.1	2.2	chr4	169229490	169229579	(20984976)	C	MER103C	DNA/hAT-Charlie	(63)	234	146	3026011
13	14.1	7.7	0.0	chr4	169229788	169229826	(20984729)	+	(ATTTCAA)n	Simple_repeat	1	42	(0)	3026012
192	25.4	8.2	2.9	chr4	169238563	169238631	(20975924)	C	L3	LINE/CR1	(2317)	1782	1710	3026032
1298	31.1	6.0	2.9	chr4	170388541	170388586	(19825969)	C	L2	LINE/L2	(363)	3056	3005	3027684
2624	16.4	0.6	4.1	chr4	170388587	170388881	(19825674)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	188	3027685
3490	22.2	3.7	6.2	chr4	172850455	172851387	(17363168)	C	MER21C	LTR/ERVL	(5)	933	25	3030832
233	24.6	3.2	1.6	chr4	173252729	173252790	(16961765)	C	L2c	LINE/L2	(43)	3344	3282	3031355
507	30.5	18.4	6.9	chr4	173486123	173486991	(16727564)	C	L3	LINE/CR1	(1349)	2750	1759	3031709
538	23.8	3.0	3.0	chr4	173487002	173487170	(16727385)	C	MER5B	DNA/hAT-Charlie	(3)	175	7	3031710
13	25.8	2.2	0.0	chr4	173489855	173489900	(16724655)	+	(ATTTTGT)n	Simple_repeat	1	47	(0)	3031713
14	26.3	0.0	0.0	chr4	173519129	173519169	(16695386)	+	A-rich	Low_complexity	1	41	(0)	3031749
553	30.6	6.3	2.8	chr4	176801140	176801428	(13413127)	+	MER110-int	LTR/ERV1	3304	3603	(1044)	3036013
364	28.0	0.0	0.0	chr4	176801497	176801589	(13412966)	+	MIR	SINE/MIR	165	257	(5)	3036016
1908	23.7	14.8	6.9	chr4	176839339	176840049	(13374506)	C	MER21B	LTR/ERVL	(75)	793	17	3036069
232	25.8	7.5	0.0	chr4	176842066	176842127	(13372428)	C	MER21C	LTR/ERVL	(218)	720	654	3036075
511	28.3	6.7	1.4	chr4	176902815	176903058	(13311497)	C	MER102c	DNA/hAT-Charlie	(0)	341	40	3036158
1140	29.6	9.3	0.5	chr4	176988189	176988568	(13225987)	+	LTR33A_	LTR/ERVL	114	530	(1)	3036280
330	35.5	1.6	3.7	chr4	176988569	176988742	(13225813)	+	MamRep605	LTR?	378	547	(302)	3036281
240	35.8	0.0	0.0	chr4	177001226	177001292	(13213263)	C	MamSINE1	SINE/tRNA-RTE	(206)	84	18	3036302
3478	11.7	2.9	0.6	chr4	177005653	177006161	(13208394)	C	MER41B	LTR/ERV1	(113)	521	1	3036311
278	20.1	0.3	1.8	chr4	177006162	177006221	(13208334)	C	MLT1E3	LTR/ERVL-MaLR	(593)	61	1	3036313
334	30.2	3.1	2.3	chr4	177119074	177119202	(13095353)	C	MER94	DNA/hAT-Blackjack	(4)	130	1	3036463
302	33.1	3.5	1.4	chr4	177119340	177119477	(13095078)	+	L4_C_Mam	LINE/RTE-X	3024	3164	(1974)	3036460
771	28.4	6.2	11.5	chr4	177283002	177283329	(12931226)	+	MLT1J	LTR/ERVL-MaLR	1	308	(204)	3036699
1717	19.9	2.5	0.3	chr4	177283330	177283686	(12930869)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3036700
5191	13.0	1.2	2.0	chr4	177448360	177449519	(12765036)	C	L1PB4	LINE/L1	(1)	6155	5008	3036944
1721	15.5	14.4	1.1	chr4	180532621	180532986	(9681569)	C	MSTA	LTR/ERVL-MaLR	(5)	423	1	3040886
2425	20.5	2.2	5.6	chr4	182975586	182976154	(7238401)	C	MER44B	DNA/TcMar-Tigger	(1)	549	1	3044185
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
14	9.3	0.0	0.0	chr4	184734032	184734054	(5480501)	+	(GCC)n	Simple_repeat	1	23	(0)	3047089
2170	14.9	0.0	0.7	chr4	185343938	185344238	(4870317)	+	AluSz	SINE/Alu	2	300	(12)	3048129
1617	13.8	1.7	6.2	chr4	185344239	185344399	(4870156)	C	LTR38C	LTR/ERV1	(147)	564	406	3048128
1908	13.4	1.3	0.0	chr4	185344403	185344700	(4869855)	C	LTR38C	LTR/ERV1	(409)	302	1	3048128
275	28.8	8.4	6.3	chr4	185358517	185358690	(4855865)	C	MIR3	SINE/MIR	(5)	203	26	3048148
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
31	14.0	0.0	0.0	chr5	5422615	5422669	(176115590)	+	(GGGGC)n	Simple_repeat	1	55	(0)	3060547
256	31.3	15.2	3.7	chr5	6704703	6705263	(174832996)	+	L2	LINE/L2	2232	2868	(551)	3062208
6127	20.3	4.1	1.9	chr5	8829096	8831480	(172706779)	+	L1PB3	LINE/L1	717	3217	(3698)	3064824
34	0.0	0.0	0.0	chr5	10249898	10249934	(171288325)	+	(A)n	Simple_repeat	1	37	(0)	3066554
2164	12.3	0.0	0.3	chr5	10551032	10551324	(170986935)	C	AluSq2	SINE/Alu	(21)	292	1	3067118
817	20.8	6.5	2.9	chr5	13567091	13567298	(167970961)	C	MER58A	DNA/hAT-Charlie	(0)	224	9	3070987
359	32.6	3.7	5.7	chr5	13567848	13567869	(167970390)	C	MIRb	SINE/MIR	(23)	245	224	3070989
1905	25.9	4.3	2.4	chr5	13567870	13568418	(167969841)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3070990
237	28.7	5.1	3.0	chr5	14036325	14036457	(167501802)	C	L3b	LINE/CR1	(8)	5224	5089	3071658
2342	8.6	0.3	4.9	chr5	14105455	14105781	(167432478)	+	AluSp	SINE/Alu	1	312	(1)	3071787
21	21.3	0.0	4.6	chr5	14144873	14144937	(167393322)	+	(GCGGCG)n	Simple_repeat	1	65	(0)	3071859
5901	21.1	6.9	4.4	chr5	14155184	14156718	(167381541)	C	L1MC4	LINE/L1	(76)	7966	6390	3071872
374	21.4	11.1	2.6	chr5	14809728	14809842	(166728417)	+	AmnSINE1	SINE/5S-Deu-L2	36	161	(414)	3072688
312	25.0	8.7	5.6	chr5	14915005	14915148	(166623111)	C	Tigger14a	DNA/TcMar-Tigger	(118)	206	58	3072872
797	21.5	8.2	0.8	chr5	16466366	16466614	(165071645)	C	MER33	DNA/hAT-Charlie	(13)	311	43	3075039
484	28.3	6.2	3.2	chr5	16894396	16894552	(164643707)	+	MIR	SINE/MIR	35	196	(66)	3075725
570	29.1	11.8	6.2	chr5	16957786	16958014	(164580245)	+	Arthur1B	DNA/hAT-Tip100	32	274	(951)	3075872
2030	15.9	7.0	1.5	chr5	16958015	16958403	(164579856)	C	MLT2D	LTR/ERVL	(0)	414	3	3075873
749	31.4	1.9	0.0	chr5	17180751	17181005	(164357254)	C	MIR	SINE/MIR	(1)	261	2	3076399
301	28.0	3.3	2.5	chr5	17181040	17181160	(164357099)	+	MLT1L	LTR/ERVL-MaLR	488	609	(1)	3076396
1263	18.3	9.7	1.2	chr5	20616021	20616274	(160921985)	C	LTR1D1	LTR/ERV1	(0)	899	622	3080898
2005	10.3	1.4	0.7	chr5	20616272	20616564	(160921695)	+	THE1B	LTR/ERVL-MaLR	70	364	(0)	3080899
5571	13.5	1.8	1.7	chr5	27241005	27241951	(154296308)	+	L1PA16	LINE/L1	4185	5132	(1014)	3089629
4919	13.8	1.1	0.1	chr5	27241937	27242712	(154295547)	+	L1PA16	LINE/L1	5378	6161	(5)	3089629
855	25.9	8.9	9.2	chr5	31988328	31988697	(149549562)	C	MER21C	LTR/ERVL	(334)	604	236	3095971
418	28.8	17.0	3.0	chr5	32508024	32508245	(149030014)	+	MLT1L	LTR/ERVL-MaLR	328	610	(0)	3097003
322	34.4	1.9	3.8	chr5	32508303	32508459	(149029800)	C	Tigger12c	DNA/TcMar-Tigger	(579)	155	2	3097005
371	27.6	11.4	4.7	chr5	32599995	32600207	(148938052)	C	MIR	SINE/MIR	(4)	258	30	3097188
1909	13.5	0.7	0.7	chr5	32692843	32693131	(148845128)	+	AluJb	SINE/Alu	5	293	(19)	3097327
2185	8.3	0.7	0.4	chr5	33272633	33272908	(148265351)	+	AluSq2	SINE/Alu	21	297	(16)	3098088
1914	8.9	9.1	17.8	chr5	33297739	33298188	(148240071)	C	MER48	LTR/ERV1	(0)	407	1	3098120
4795	12.9	4.2	1.7	chr5	33298189	33298338	(148239921)	+	LTR39	LTR/ERV1	630	783	(0)	3098119
705	33.7	6.9	2.5	chr5	33311764	33312278	(148225981)	C	MARNA	DNA/TcMar-Mariner	(18)	568	30	3098145
428	27.1	2.9	5.7	chr5	34570811	34570986	(146967273)	C	LTR85b	LTR/Gypsy?	(268)	516	346	3100017
273	32.8	3.7	1.5	chr5	36502669	36502801	(145035458)	+	AmnSINE1	SINE/5S-Deu-L2	268	403	(172)	3102913
350	23.4	18.9	3.8	chr5	37723224	37723383	(143814876)	+	MIRc	SINE/MIR	7	197	(11)	3104955
882	15.8	0.5	13.2	chr5	37810049	37810260	(143727999)	+	MER53	DNA/hAT	9	193	(0)	3105068
194	29.9	1.3	7.2	chr5	38464304	38464386	(143073873)	+	OldhAT1	DNA/hAT-Ac	2692	2769	(79)	3106178
12	19.5	2.9	0.0	chr5	38846052	38846086	(142692173)	+	(CGCCCCG)n	Simple_repeat	1	36	(0)	3106772
14	19.9	4.2	2.0	chr5	39074435	39074482	(142463777)	+	(CCCCG)n	Simple_repeat	1	50	(0)	3107042
2485	7.5	0.0	0.0	chr5	39102047	39102338	(142435921)	C	AluSc8	SINE/Alu	(19)	292	1	3107080
285	34.0	19.1	0.8	chr5	39102627	39102869	(142435390)	+	MamRTE1	LINE/RTE-BovB	2698	2995	(817)	3107076
448	28.4	9.5	4.6	chr5	39513484	39513679	(142024580)	+	MIRb	SINE/MIR	51	260	(8)	3107663
210	31.3	5.7	1.0	chr5	39517863	39517962	(142020297)	C	MER5A	DNA/hAT-Charlie	(5)	184	80	3107671
329	27.6	5.1	1.7	chr5	39517882	39518022	(142020237)	+	MER5A	DNA/hAT-Charlie	29	178	(0)	3107672
18	20.3	0.0	0.0	chr5	39518180	39518235	(142020024)	+	(TGTGTG)n	Simple_repeat	1	56	(0)	3107673
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
3110	17.6	2.9	0.2	chr5	41414610	41415144	(140123115)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	3110377
572	31.2	9.8	0.8	chr5	41527101	41527345	(140010914)	+	MLT1H	LTR/ERVL-MaLR	11	282	(267)	3110518
4548	11.2	0.5	1.1	chr5	41527346	41527769	(140010490)	+	MER41B	LTR/ERV1	1	426	(208)	3110519
2578	25.7	8.2	3.3	chr5	42945280	42945795	(138592464)	C	L1MD	LINE/L1	(1842)	4304	3788	3112297
18	4.1	0.0	0.0	chr5	43556848	43556872	(137981387)	+	(CTC)n	Simple_repeat	1	25	(0)	3113264
4826	21.0	8.4	1.7	chr5	50339451	50341385	(131196874)	+	L1MA3	LINE/L1	4228	6277	(28)	3116401
1412	34.0	5.7	8.9	chr5	52859555	52860265	(128677994)	C	L3	LINE/CR1	(245)	3854	3171	3119506
2534	17.7	3.7	5.8	chr5	53019281	53019531	(128518728)	+	MER44B	DNA/TcMar-Tigger	41	295	(255)	3119725
2106	13.6	0.0	0.0	chr5	53019532	53019825	(128518434)	C	AluSx	SINE/Alu	(18)	294	1	3119726
2534	17.7	3.7	5.8	chr5	53019826	53020094	(128518165)	+	MER44B	DNA/TcMar-Tigger	296	550	(0)	3119725
273	28.9	2.2	1.1	chr5	53490828	53490918	(128047341)	C	LTR88a	LTR/Gypsy?	(739)	98	7	3120347
8214	22.9	5.5	2.3	chr5	54329557	54331132	(127207127)	C	ERVL-E-int	LTR/ERVL	(621)	5046	3423	3121558
260	29.4	6.3	6.3	chr5	54701417	54701543	(126836716)	+	L2a	LINE/L2	3236	3362	(13)	3122136
2816	19.3	3.7	4.2	chr5	54744743	54744869	(126793390)	C	MER67B	LTR/ERV1	(0)	661	545	3122209
2582	5.7	0.0	0.0	chr5	55438620	55438915	(126099344)	+	AluY	SINE/Alu	1	296	(15)	3123229
17	4.9	0.0	0.0	chr5	55868757	55868777	(125669482)	+	(TG)n	Simple_repeat	1	21	(0)	3124015
261	27.5	1.2	2.4	chr5	56278555	56278636	(125259623)	+	CR1-12_AMi	LINE/CR1	342	422	(192)	3124782
227	34.2	1.2	1.2	chr5	56279971	56280050	(125258209)	+	MamSINE1	SINE/tRNA-RTE	2	81	(209)	3124786
17	15.0	4.3	2.1	chr5	57173958	57174003	(124364256)	+	(CTCC)n	Simple_repeat	1	48	(0)	3126300
382	22.2	2.9	0.0	chr5	57503762	57503860	(124034399)	C	Tigger16b	DNA/TcMar-Tigger	(1)	335	234	3126863
347	27.1	10.1	7.6	chr5	58188230	58188373	(123349886)	C	MIRb	SINE/MIR	(12)	256	109	3127777
17	22.2	2.6	6.3	chr5	58322697	58322773	(123215486)	+	GA-rich	Low_complexity	1	79	(0)	3127964
584	29.0	4.8	11.3	chr5	58452536	58452889	(123085370)	+	L2b	LINE/L2	3029	3358	(17)	3128134
37	0.0	0.0	0.0	chr5	59840235	59840266	(121697993)	+	(CA)n	Simple_repeat	1	32	(0)	3130059
441	31.8	11.6	4.3	chr5	59840267	59840502	(121697757)	+	L2a	LINE/L2	3187	3421	(5)	3130058
462	33.3	12.4	0.6	chr5	59840519	59840865	(121697394)	+	L3	LINE/CR1	3644	4037	(62)	3130057
2235	22.9	9.4	2.1	chr5	62938792	62939371	(118598888)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	1	3134549
858	24.6	5.3	7.8	chr5	63261992	63262405	(118275854)	C	L1ME1	LINE/L1	(0)	6179	5800	3134977
385	28.6	9.8	6.8	chr5	63262383	63263087	(118275172)	C	L1MEc	LINE/L1	(1449)	1303	251	3134978
404	18.9	13.2	1.5	chr5	65036021	65036154	(116502105)	C	L1ME4a	LINE/L1	(0)	6124	5973	3137272
303	30.8	10.6	3.0	chr5	65036193	65036393	(116501866)	C	L1ME4a	LINE/L1	(189)	5935	5718	3137272
227	27.9	0.0	1.6	chr5	65190511	65190572	(116347687)	+	AmnSINE1	SINE/5S-Deu-L2	6	66	(509)	3137481
324	32.8	6.2	2.7	chr5	65209443	65209627	(116328632)	C	AmnSINE1	SINE/5S-Deu-L2	(354)	221	30	3137499
925	33.7	16.5	4.8	chr5	65828031	65828781	(115709478)	+	L3	LINE/CR1	3295	4093	(6)	3138470
427	21.1	11.2	0.0	chr5	65861849	65861943	(115676316)	C	L2a	LINE/L2	(8)	3418	3312	3138541
1567	15.7	1.8	0.0	chr5	65862075	65862291	(115675968)	+	AluJb	SINE/Alu	84	304	(8)	3138542
28	0.0	3.3	0.0	chr5	65874255	65874284	(115663975)	+	(TTTA)n	Simple_repeat	1	31	(0)	3138572
190	0.0	3.5	3.5	chr5	65874286	65874314	(115663945)	+	MER5B	DNA/hAT-Charlie	150	178	(0)	3138573
479	35.4	5.8	0.0	chr5	65874545	65874770	(115663489)	+	L1M5	LINE/L1	5481	5720	(404)	3138574
1666	27.1	13.9	4.4	chr5	65985625	65986352	(115551907)	+	L2	LINE/L2	1731	2538	(881)	3138790
2141	11.7	0.0	0.0	chr5	68046183	68046447	(113491812)	C	AluSx	SINE/Alu	(11)	301	37	3141629
3606	16.2	1.9	3.2	chr5	68046448	68046686	(113491573)	C	MER44C	DNA/TcMar-Tigger	(383)	350	110	3141628
2327	14.7	2.2	0.0	chr5	68046688	68047042	(113491217)	+	L1PA13	LINE/L1	5793	6155	(8)	3141630
726	27.2	5.6	2.3	chr5	72066540	72066799	(109471460)	+	MER102c	DNA/hAT-Charlie	58	326	(5)	3148446
278	21.6	6.3	7.4	chr5	72139306	72139426	(109398833)	+	MIR3	SINE/MIR	6	133	(135)	3148545
500	32.5	8.2	0.9	chr5	72252579	72252792	(109285467)	C	MamRep137	DNA/TcMar-Tigger	(130)	380	150	3148689
355	26.8	3.9	2.4	chr5	72252801	72252926	(109285333)	C	HAL1	LINE/L1	(1757)	750	623	3148690
1687	19.8	7.4	0.8	chr5	72835329	72835694	(108702565)	C	MLT1A1	LTR/ERVL-MaLR	(16)	392	1	3149581
6379	19.7	16.8	1.2	chr5	72835695	72837156	(108701103)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	1	3149581
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
17	4.3	0.0	0.0	chr5	73322205	73322228	(108216031)	+	(AAC)n	Simple_repeat	1	24	(0)	3150320
245	31.8	1.1	5.4	chr5	73376829	73376921	(108161338)	C	MIRc	SINE/MIR	(18)	250	162	3150393
19	0.0	0.0	0.0	chr5	73376997	73377017	(108161242)	+	(A)n	Simple_repeat	1	21	(0)	3150394
635	28.1	11.3	5.1	chr5	74167453	74167864	(107370395)	+	Tigger15a	DNA/TcMar-Tigger	267	707	(8)	3151591
269	19.4	7.5	0.0	chr5	74575651	74575712	(106962547)	C	MIRb	SINE/MIR	(2)	266	200	3152168
21	22.3	0.0	1.9	chr5	74631150	74631203	(106907056)	+	(AAC)n	Simple_repeat	1	54	(0)	3152261
4535	16.2	1.4	0.1	chr5	74762249	74762972	(106775287)	C	MER44C	DNA/TcMar-Tigger	(0)	733	1	3152477
3074	13.0	6.8	0.6	chr5	76805811	76806305	(104731954)	C	LTR64	LTR/ERV1	(0)	528	1	3155662
210	29.3	13.2	1.0	chr5	76814303	76814402	(104723857)	C	L2a	LINE/L2	(297)	3129	3016	3155676
2047	12.3	1.9	3.1	chr5	76814545	76814861	(104723398)	C	AluSq2	SINE/Alu	(0)	313	1	3155677
433	28.5	8.1	6.5	chr5	77133116	77133440	(104404819)	+	MLT1H2	LTR/ERVL-MaLR	101	533	(16)	3156245
1074	26.2	4.6	4.6	chr5	77133491	77133886	(104404373)	+	MLT1H2-int	LTR/ERVL-MaLR	1	445	(964)	3156245
939	1.0	0.0	0.0	chr5	78529560	78529659	(103008600)	+	AluYb8	SINE/Alu	206	305	(13)	3158224
385	24.1	12.4	2.8	chr5	78638542	78638686	(102899573)	+	MamSINE1	SINE/tRNA-RTE	22	182	(108)	3158365
403	33.2	10.4	2.3	chr5	78638751	78639101	(102899158)	+	L3	LINE/CR1	3201	3583	(516)	3158366
190	33.9	18.7	1.6	chr5	78806555	78806810	(102731449)	C	L3b	LINE/CR1	(744)	4488	4308	3158639
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
292	24.1	4.1	4.1	chr5	82357628	82357748	(99180511)	+	MIRc	SINE/MIR	21	141	(127)	3164518
13	4.2	8.0	0.0	chr5	82397207	82397231	(99141028)	+	(TTCTT)n	Simple_repeat	1	27	(0)	3164573
1548	22.8	7.7	5.5	chr5	83322466	83322958	(98215301)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3165809
388	29.8	10.6	9.0	chr5	83322959	83323160	(98215099)	C	L2c	LINE/L2	(88)	3299	3077	3165808
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
739	31.6	10.3	1.8	chr5	84290013	84290411	(97247848)	+	LTR16	LTR/ERVL	1	437	(1)	3167047
322	12.2	0.0	0.0	chr5	84290465	84290513	(97247746)	+	MER34	LTR/ERV1	2	50	(537)	3167048
680	26.1	7.0	1.5	chr5	84290557	84290896	(97247363)	+	MER34	LTR/ERV1	158	570	(1)	3167048
532	33.9	5.0	0.5	chr5	84403839	84404028	(97134231)	C	MIR3	SINE/MIR	(8)	200	2	3167222
366	29.9	10.5	0.0	chr5	84404121	84404257	(97134002)	+	MIRb	SINE/MIR	32	184	(84)	3167223
472	26.1	3.2	1.6	chr5	84437577	84437756	(97100503)	+	L1MC2	LINE/L1	37	164	(5881)	3167271
6418	13.3	1.1	4.6	chr5	84437806	84438926	(97099333)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1338	3167272
1769	21.9	6.1	1.4	chr5	84688430	84688868	(96849391)	+	LOR1b	LTR/ERV1	1	461	(0)	3167588
3075	14.0	0.8	3.1	chr5	84688869	84689226	(96849033)	+	L1PB4	LINE/L1	5443	5791	(365)	3167587
3503	13.6	0.9	0.7	chr5	87113914	87114462	(94423797)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	3170650
606	27.2	13.5	0.2	chr5	87120509	87120721	(94417538)	C	MIRb	SINE/MIR	(23)	245	1	3170663
262	32.4	0.0	0.0	chr5	87169629	87169699	(94368560)	C	L2c	LINE/L2	(57)	3330	3260	3170721
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
599	27.5	0.0	1.2	chr5	91311783	91311955	(90226304)	+	AmnSINE1	SINE/5S-Deu-L2	1	171	(404)	3176014
19	17.6	4.2	5.4	chr5	91383382	91383387	(90154872)	+	(GCGCC)n	Simple_repeat	1	24	(50)	3176169
12	24.6	3.6	3.5	chr5	91383388	91383443	(90154816)	+	(GCC)n	Simple_repeat	1	58	(0)	3176170
19	17.6	4.2	5.4	chr5	91383444	91383452	(90154807)	+	(GCGCC)n	Simple_repeat	25	74	(0)	3176169
1550	32.2	6.8	1.5	chr5	91848429	91848960	(89689299)	C	LTR16D2	LTR/ERVL	(4)	568	7	3176799
619	19.4	0.0	0.0	chr5	92019442	92019539	(89518720)	C	MER44B	DNA/TcMar-Tigger	(2)	548	451	3177013
1256	21.4	0.8	0.0	chr5	92019546	92019779	(89518480)	C	MER44B	DNA/TcMar-Tigger	(309)	241	6	3177013
13	4.2	8.0	0.0	chr5	93162985	93163009	(88375250)	+	(AAAG)n	Simple_repeat	1	27	(0)	3178348
454	30.5	4.2	1.9	chr5	93189488	93189800	(88348459)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	61	3178376
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
17	15.2	4.3	2.1	chr5	93582091	93582136	(87956123)	+	(CCTCTC)n	Simple_repeat	1	48	(0)	3178829
7059	13.0	1.5	0.6	chr5	94196459	94198425	(87339834)	C	L1PA15	LINE/L1	(0)	6165	4182	3179544
413	37.5	8.6	3.2	chr5	94218209	94218580	(87319679)	+	L2b	LINE/L2	2973	3366	(9)	3179565
16	13.2	0.0	0.0	chr5	94470260	94470284	(87067975)	+	(A)n	Simple_repeat	1	25	(0)	3179865
16	9.7	0.0	0.0	chr5	94693748	94693769	(86844490)	+	(T)n	Simple_repeat	1	22	(0)	3180176
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
11	22.5	3.5	5.1	chr5	96297403	96297459	(85240800)	+	(TGTTGC)n	Simple_repeat	1	59	(0)	3182389
18	14.7	0.0	0.0	chr5	96573275	96573304	(84964955)	+	(T)n	Simple_repeat	1	30	(0)	3182755
413	31.4	7.3	2.4	chr5	98310171	98310379	(83227880)	C	LTR33	LTR/ERVL	(5)	510	291	3184982
7141	18.6	1.7	1.8	chr5	98349235	98350829	(83187430)	+	L1MA4	LINE/L1	1243	2858	(4707)	3185028
183	20.3	6.3	3.3	chr5	98455079	98455139	(83083120)	C	X6A_LINE	LINE/CR1	(122)	958	896	3185138
14306	17.0	3.2	3.4	chr5	98466939	98468948	(83069311)	+	L1PA17	LINE/L1	2380	4392	(1754)	3185160
14306	15.7	2.0	1.7	chr5	98470037	98471608	(83066651)	+	L1PA17	LINE/L1	4539	6112	(54)	3185160
1976	14.5	4.2	2.3	chr5	98797060	98797363	(82740896)	C	AluJb	SINE/Alu	(2)	310	1	3185553
408	37.0	6.8	3.5	chr5	99019963	99020273	(82517986)	+	HAL1ME	LINE/L1	9	330	(2135)	3185925
362	24.3	11.1	3.3	chr5	102853841	102854023	(78684236)	+	Charlie23a	DNA/hAT-Charlie	83	281	(58)	3190661
732	28.6	4.0	0.5	chr5	102854036	102854253	(78684006)	+	MIR	SINE/MIR	37	262	(0)	3190662
18	24.9	2.9	2.9	chr5	103461583	103461651	(78076608)	+	(TTCC)n	Simple_repeat	1	69	(0)	3191480
398	26.5	5.7	0.8	chr5	106292714	106292846	(75245413)	+	L1MEi	LINE/L1	15	154	(2058)	3194932
242	27.6	11.5	4.0	chr5	106293021	106293292	(75244967)	+	L1MEi	LINE/L1	637	931	(1281)	3194932
3914	18.9	2.8	3.4	chr5	106331323	106331795	(75206464)	C	L1MB2	LINE/L1	(390)	5781	5329	3194992
712	22.0	2.3	0.6	chr5	107869987	107870160	(73668099)	+	MER5B	DNA/hAT-Charlie	2	178	(0)	3196909
376	33.3	2.2	3.3	chr5	109455991	109456170	(72082089)	+	L1ME4b	LINE/L1	703	880	(12)	3199014
396	33.9	1.1	5.4	chr5	109863510	109863693	(71674566)	C	MIRb	SINE/MIR	(23)	245	70	3199562
209	31.4	6.0	3.6	chr5	110000210	110000340	(71537919)	+	L2b	LINE/L2	3249	3380	(7)	3199749
26	0.0	0.0	0.0	chr5	110361779	110361803	(71176456)	+	(T)n	Simple_repeat	1	25	(0)	3200145
361	30.4	1.9	2.5	chr5	110413897	110414058	(71124201)	C	MLT1I	LTR/ERVL-MaLR	(246)	165	5	3200214
313	30.2	23.5	4.3	chr5	110414068	110414388	(71123871)	+	L2a	LINE/L2	3042	3424	(2)	3200213
22	13.0	0.0	0.0	chr5	110478898	110478931	(71059328)	+	(T)n	Simple_repeat	1	34	(0)	3200292
259	33.5	6.8	12.5	chr5	110917337	110917680	(70620579)	C	L2c	LINE/L2	(3)	3384	3062	3200791
3430	12.7	3.0	2.1	chr5	111043937	111044460	(70493799)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3200918
1045	26.6	6.9	6.6	chr5	111061614	111062365	(70475894)	+	L1ME4b	LINE/L1	62	760	(164)	3200938
26	8.9	0.0	0.0	chr5	111737716	111737751	(69800508)	+	(A)n	Simple_repeat	1	36	(0)	3201814
250	31.0	2.7	0.0	chr5	111748475	111748545	(69789714)	C	L2b	LINE/L2	(0)	3375	3303	3201821
18	27.9	0.0	2.9	chr5	111757614	111757681	(69780578)	+	(CGCACCC)n	Simple_repeat	1	68	(0)	3201827
429	28.6	1.5	0.8	chr5	111998065	111998198	(69540061)	+	MER5B	DNA/hAT-Charlie	41	175	(3)	3202186
2188	12.6	2.7	0.7	chr5	112959820	112960113	(68578146)	C	AluSc5	SINE/Alu	(9)	300	1	3203612
19	19.2	0.0	0.0	chr5	112960293	112960328	(68577931)	+	(T)n	Simple_repeat	1	36	(0)	3203613
5314	12.7	6.0	0.1	chr5	115398278	115399206	(66139053)	C	L1PA15	LINE/L1	(9)	6156	5175	3206749
445	29.4	10.9	5.5	chr5	115459360	115459741	(66078518)	+	L2c	LINE/L2	2943	3347	(40)	3206822
453	27.5	14.2	2.8	chr5	115460728	115460944	(66077315)	+	MIRb	SINE/MIR	8	253	(15)	3206823
220	21.9	6.4	4.0	chr5	116454653	116454728	(65083531)	C	Penelope1_Vert	LINE/Penelope	(805)	282	205	3208162
34	12.1	0.0	0.0	chr5	116454790	116454845	(65083414)	+	(GT)n	Simple_repeat	1	56	(0)	3208163
195	30.5	1.7	3.3	chr5	119303286	119303346	(62234913)	+	MIR3	SINE/MIR	19	78	(130)	3212124
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
362	32.3	16.0	2.8	chr5	121969066	121969524	(59568735)	C	MamRep605	LTR?	(120)	729	199	3215361
1165	24.6	9.6	3.4	chr5	124058274	124058710	(57479549)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3218168
19	8.1	0.0	0.0	chr5	124747158	124747183	(56791076)	+	(T)n	Simple_repeat	1	26	(0)	3219049
15	31.3	0.0	0.0	chr5	124747601	124747647	(56790612)	+	(CC)n	Simple_repeat	1	47	(0)	3219050
2464	31.7	2.0	3.9	chr5	124932878	124933230	(56605029)	C	ERV3-16A3_I-int	LTR/ERVL	(2956)	2040	1682	3219374
865	29.1	0.4	0.4	chr5	124933246	124933483	(56604776)	C	ERV3-16A3_LTR	LTR/ERVL	(184)	238	1	3219381
1412	28.4	3.6	12.6	chr5	124935737	124936238	(56602021)	C	MER21C	LTR/ERVL	(370)	568	128	3219385
558	31.1	8.3	2.4	chr5	125043557	125043806	(56494453)	C	MIRc	SINE/MIR	(0)	268	3	3219544
645	31.5	12.5	4.0	chr5	125140998	125141348	(56396911)	+	LTR86A1	LTR/ERVL	1	385	(128)	3219675
16	4.0	3.9	0.0	chr5	125198998	125199023	(56339236)	+	(AAAG)n	Simple_repeat	1	27	(0)	3219746
193	37.9	19.1	0.0	chr5	125232712	125232880	(56305379)	+	LFSINE_Vert	SINE/tRNA	248	456	(3)	3219794
455	32.0	6.5	4.2	chr5	125484091	125484331	(56053928)	C	MIRb	SINE/MIR	(8)	260	14	3220105
36	0.0	0.0	0.0	chr5	125550455	125550485	(55987774)	+	(GT)n	Simple_repeat	1	31	(0)	3220180
433	31.8	13.9	3.2	chr5	126384659	126385034	(55153225)	+	L2c	LINE/L2	2961	3387	(0)	3221097
226	25.4	5.3	0.0	chr5	126385187	126385257	(55153002)	C	MIRc	SINE/MIR	(185)	83	9	3221098
229	26.6	1.5	0.0	chr5	126884486	126884549	(54653710)	+	L2-1_AMi	LINE/L2	457	521	(714)	3222135
767	29.5	12.3	0.6	chr5	126884682	126885012	(54653247)	+	L2b	LINE/L2	2611	2985	(434)	3222136
18	8.7	0.0	0.0	chr5	126970467	126970491	(54567768)	+	(T)n	Simple_repeat	1	25	(0)	3222250
20	16.2	0.0	2.6	chr5	127821017	127821054	(53717205)	+	(CA)n	Simple_repeat	1	38	(0)	3223323
493	29.6	4.8	2.0	chr5	127821108	127821310	(53716949)	C	MER63A	DNA/hAT-Blackjack	(1)	209	1	3223324
3510	9.7	20.2	0.5	chr5	127826177	127826798	(53711461)	+	L1PA16	LINE/L1	5386	6161	(5)	3223329
358	25.6	1.2	0.0	chr5	127893085	127893166	(53645093)	C	MIR3	SINE/MIR	(13)	195	113	3223430
291	20.6	1.4	0.0	chr5	130992083	130992150	(50546109)	+	L1MC5a	LINE/L1	2695	2763	(14)	3227217
12	19.9	2.3	4.4	chr5	131164982	131165025	(50373234)	+	(TCCCC)n	Simple_repeat	1	45	(0)	3227449
249	27.1	4.4	13.7	chr5	131466164	131466338	(50071921)	+	MamRep605	LTR?	306	463	(386)	3227996
264	21.7	0.0	0.0	chr5	131466361	131466406	(50071853)	+	MamRep605	LTR?	676	721	(128)	3227996
2543	11.8	0.6	0.3	chr5	131466446	131466802	(50071457)	+	THE1B	LTR/ERVL-MaLR	7	364	(0)	3227997
5532	23.5	6.6	4.2	chr5	131609283	131610856	(49927403)	+	ERV3-16A3_I-int	LTR/ERVL	3609	5222	(4)	3228237
5868	23.5	9.1	2.9	chr5	132089881	132091979	(49446280)	C	HERV16-int	LTR/ERVL	(1784)	3442	1240	3228897
312	29.3	13.4	2.2	chr5	132094955	132095139	(49443120)	C	MIRb	SINE/MIR	(40)	228	20	3228900
28	3.3	0.0	0.0	chr5	132264224	132264254	(49274005)	+	(TCCT)n	Simple_repeat	1	31	(0)	3229117
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
17	13.1	0.0	0.0	chr5	132962795	132962820	(48575439)	+	(T)n	Simple_repeat	1	26	(0)	3230228
646	29.1	4.1	4.8	chr5	134552374	134552640	(46985619)	+	MIR	SINE/MIR	7	255	(7)	3232811
1849	16.6	0.0	4.6	chr5	134552662	134552987	(46985272)	C	AluJb	SINE/Alu	(1)	311	1	3232812
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
14	12.7	0.0	0.0	chr5	135993989	135994014	(45544245)	+	(CAGA)n	Simple_repeat	1	26	(0)	3235069
550	27.1	13.8	1.0	chr5	136016960	136017160	(45521099)	+	MIRb	SINE/MIR	38	268	(0)	3235103
478	33.3	16.1	4.0	chr5	136017477	136017797	(45520462)	C	L2c	LINE/L2	(55)	3320	2981	3235104
293	32.9	18.9	1.7	chr5	136619813	136620171	(44918088)	+	L2b	LINE/L2	446	880	(2539)	3235886
726	32.7	15.3	4.8	chr5	136620233	136621389	(44916870)	+	L2b	LINE/L2	1415	2714	(705)	3235886
244	36.5	3.7	0.0	chr5	136810593	136810696	(44727563)	+	MamSINE1	SINE/tRNA-RTE	5	112	(178)	3236159
500	29.6	2.2	8.6	chr5	137470858	137471101	(44067158)	+	MIR	SINE/MIR	35	262	(0)	3237003
219	29.2	6.2	11.8	chr5	137833434	137833569	(43704690)	+	MIR3	SINE/MIR	66	193	(15)	3237599
218	42.8	5.9	4.2	chr5	137833689	137833905	(43704354)	C	MamSINE1	SINE/tRNA-RTE	(2)	288	68	3237600
23	16.4	0.0	0.0	chr5	137954487	137954493	(43583766)	+	(CATA)n	Simple_repeat	1	24	(46)	3237818
22	9.4	0.0	0.0	chr5	137954494	137954528	(43583731)	+	(ACACAC)n	Simple_repeat	1	35	(0)	3237819
15	4.1	4.0	0.0	chr5	138465013	138465037	(43073222)	+	(AGGG)n	Simple_repeat	1	26	(0)	3238915
2159	9.7	0.3	1.0	chr5	138632818	138633127	(42905132)	C	AluSg7	SINE/Alu	(1)	308	1	3239252
540	19.2	0.9	0.9	chr5	138633128	138633232	(42905027)	C	MLT1J	LTR/ERVL-MaLR	(337)	175	71	3239253
1238	25.6	9.1	0.1	chr5	138633274	138633864	(42904395)	+	L2a	LINE/L2	2720	3374	(1)	3239247
40	25.9	2.6	3.1	chr5	138753262	138753416	(42784843)	+	G-rich	Low_complexity	1	159	(0)	3239539
15	0.0	5.3	0.0	chr5	139294474	139294492	(42243767)	+	(CG)n	Simple_repeat	1	20	(0)	3240506
16	16.4	4.9	0.0	chr5	139677209	139677249	(41861010)	+	(CGCC)n	Simple_repeat	1	43	(0)	3241293
12	10.8	6.7	0.0	chr5	139698867	139698896	(41839363)	+	(ATTTGC)n	Simple_repeat	1	32	(0)	3241326
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
3309	10.8	3.8	0.8	chr5	140221208	140221718	(41316541)	C	L1MB3	LINE/L1	(10)	6173	5647	3242206
1646	11.6	12.8	1.1	chr5	140664164	140664308	(40873951)	+	AluJb	SINE/Alu	136	312	(0)	3243028
205	21.4	9.2	4.4	chr5	140700148	140700229	(40838030)	+	MIR3	SINE/MIR	112	192	(38)	3243090
196	22.9	2.0	0.0	chr5	140700414	140700461	(40837798)	C	MamRTE1	LINE/RTE-BovB	(3740)	72	24	3243091
695	12.5	1.8	0.0	chr5	140711450	140711561	(40826698)	+	L1MC3	LINE/L1	6747	6860	(925)	3243113
279	20.6	14.1	1.4	chr5	142325594	142325667	(39212592)	C	MamRep488	DNA/hAT-Tip100	(77)	142	58	3245724
20	0.0	4.0	0.0	chr5	142779422	142779446	(38758813)	+	(GT)n	Simple_repeat	1	26	(0)	3246649
356	27.8	0.9	1.7	chr5	142826322	142826438	(38711821)	C	MIR	SINE/MIR	(50)	212	97	3246733
4168	16.9	4.5	1.4	chr5	143033988	143034768	(38503491)	+	L1MB7	LINE/L1	5379	6184	(0)	3247085
1265	32.3	10.6	3.3	chr5	143350095	143350994	(38187265)	C	L2c	LINE/L2	(496)	2923	1951	3247534
393	38.1	0.9	8.3	chr5	143351011	143351371	(38186888)	+	L2	LINE/L2	2621	2954	(465)	3247535
352	28.6	18.3	1.2	chr5	143554343	143554505	(37983754)	+	MIRc	SINE/MIR	48	244	(24)	3247867
297	29.6	9.7	5.4	chr5	143921469	143921636	(37616623)	+	MamRep488	DNA/hAT-Tip100	43	218	(1)	3248480
249	30.6	7.2	7.6	chr5	143921858	143922094	(37616165)	+	L2	LINE/L2	2412	2647	(772)	3248481
534	28.0	5.0	5.0	chr5	144190075	144190272	(37347987)	+	L2c	LINE/L2	3145	3345	(42)	3248911
363	28.7	6.6	9.8	chr5	144190272	144190536	(37347723)	+	MIR	SINE/MIR	16	268	(0)	3248912
256	23.2	8.3	2.0	chr5	145587791	145587891	(35950368)	+	MER135	DNA	12	119	(109)	3250960
998	30.1	12.5	3.5	chr5	146872925	146873524	(34664735)	+	L2c	LINE/L2	2290	2951	(468)	3253328
411	18.8	2.0	0.0	chr5	146873526	146873621	(34664638)	C	L1ME2z	LINE/L1	(7)	6437	6340	3253329
1168	11.8	0.7	0.0	chr5	146873622	146873774	(34664485)	C	AluSc	SINE/Alu	(21)	288	135	3253330
207	33.3	8.1	0.0	chr5	147484032	147484133	(34054126)	C	MamSINE1	SINE/tRNA-RTE	(179)	111	1	3254328
393	31.8	0.0	0.8	chr5	147484267	147484396	(34053863)	+	UCON78	DNA	111	239	(204)	3254329
671	33.2	4.9	0.4	chr5	147535923	147536155	(34002104)	C	MIR	SINE/MIR	(1)	261	18	3254423
386	26.3	12.4	3.6	chr5	148965613	148965905	(32572354)	C	MER102b	DNA/hAT-Charlie	(0)	341	1	3256771
276	36.2	4.5	0.0	chr5	148965911	148966120	(32572139)	C	hAT-N1_Mam	DNA/hAT-Tip100?	(37)	303	84	3256772
311	32.0	13.1	4.3	chr5	149001896	149002199	(32536060)	+	L3	LINE/CR1	3375	3709	(390)	3256849
230	30.3	6.3	5.3	chr5	149002278	149002371	(32535888)	+	L3	LINE/CR1	3994	4088	(11)	3256849
602	31.4	9.6	5.5	chr5	149005049	149005537	(32532722)	+	MLT1K	LTR/ERVL-MaLR	75	585	(10)	3256856
345	28.6	11.7	3.2	chr5	149007136	149007373	(32530886)	C	L2a	LINE/L2	(0)	3426	3140	3256859
456	23.6	3.4	4.1	chr5	149227541	149227686	(32310573)	C	MER5A	DNA/hAT-Charlie	(2)	187	43	3257254
839	27.7	8.2	8.8	chr5	149445709	149446074	(32092185)	C	MLT1H	LTR/ERVL-MaLR	(85)	464	83	3257748
2058	13.9	2.3	0.3	chr5	149446219	149446521	(32091738)	C	AluSz6	SINE/Alu	(3)	309	1	3257751
261	28.9	4.9	4.9	chr5	149486132	149486233	(32052026)	+	MLT1J1	LTR/ERVL-MaLR	66	167	(277)	3257860
821	5.3	7.8	7.1	chr5	150022052	150022192	(31516067)	+	MER30	DNA/hAT-Charlie	87	228	(2)	3259050
838	29.7	6.0	2.1	chr5	150022203	150022632	(31515627)	C	L5	LINE/RTE-X	(220)	2045	1598	3259051
972	20.3	10.2	0.0	chr5	150036223	150036434	(31501825)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	1	3259088
376	26.4	4.6	3.4	chr5	150036435	150036562	(31501697)	C	MIR3	SINE/MIR	(78)	130	1	3259087
622	20.6	2.4	0.0	chr5	150377825	150377984	(31160275)	C	L1M4	LINE/L1	(3241)	2905	2742	3259806
1706	7.3	1.1	8.1	chr5	150469583	150469713	(31068546)	+	L1P4	LINE/L1	5678	5786	(382)	3260021
1057	17.0	3.2	0.9	chr5	150469846	150470059	(31068200)	+	MER33	DNA/hAT-Charlie	1	219	(105)	3260023
1989	17.9	1.2	4.8	chr5	150517440	150517718	(31020541)	C	L1MC1	LINE/L1	(130)	6203	5923	3260149
228	28.3	10.9	0.0	chr5	150638126	150638256	(30900003)	+	L2b	LINE/L2	3031	3190	(197)	3260419
1842	13.8	4.5	0.7	chr5	150695041	150695315	(30842944)	C	AluJb	SINE/Alu	(26)	286	1	3260540
532	33.0	0.5	1.1	chr5	151093814	151093997	(30444262)	C	MIR3	SINE/MIR	(11)	197	15	3261142
462	27.6	8.4	3.9	chr5	151684676	151684879	(29853380)	C	MIRc	SINE/MIR	(9)	259	46	3262389
25	3.5	0.0	0.0	chr5	151685393	151685422	(29852837)	+	(CT)n	Simple_repeat	1	30	(0)	3262390
191	34.6	18.2	0.0	chr5	151693935	151694064	(29844195)	C	MIR3	SINE/MIR	(21)	187	29	3262415
314	27.0	2.9	1.0	chr5	151745284	151745384	(29792875)	+	MIR3	SINE/MIR	30	132	(76)	3262548
17375	14.3	2.4	2.8	chr5	153147967	153153965	(28384294)	+	L1PA16	LINE/L1	891	6869	(0)	3264771
307	31.2	9.1	4.8	chr5	153628961	153629128	(27909131)	C	MIR3	SINE/MIR	(10)	198	23	3265596
13	13.3	2.7	5.3	chr5	153629197	153629233	(27909026)	+	(TCC)n	Simple_repeat	1	38	(0)	3265597
924	22.9	12.6	4.7	chr5	153901356	153901904	(27636355)	+	MLT1F	LTR/ERVL-MaLR	15	576	(3)	3266080
290	22.1	8.7	0.0	chr5	154189774	154189868	(27348391)	+	L2a	LINE/L2	3313	3416	(10)	3266617
374	33.8	4.2	6.8	chr5	154287255	154287737	(27250522)	+	L2c	LINE/L2	2918	3387	(0)	3266825
809	21.5	4.8	1.1	chr5	154368041	154368219	(27170040)	C	MER5A	DNA/hAT-Charlie	(3)	186	1	3266985
251	20.0	3.5	1.8	chr5	154368242	154368297	(27169962)	+	L2b	LINE/L2	3314	3370	(5)	3266986
444	9.9	0.0	2.7	chr5	154368385	154368457	(27169802)	+	L1MB8	LINE/L1	6108	6178	(0)	3266987
295	20.8	2.0	3.0	chr5	157511528	157511626	(24026633)	+	UCON37	Unknown	42	139	(4)	3272815
13	16.9	0.0	8.5	chr5	157731251	157731297	(23806962)	+	GA-rich	Low_complexity	1	47	(0)	3273268
13	21.7	7.5	0.0	chr5	157859249	157859301	(23678958)	+	(TGAGA)n	Simple_repeat	1	57	(0)	3273467
393	25.4	5.5	4.8	chr5	158054890	158055034	(23483225)	+	MER125	DNA	3	148	(28)	3273925
409	26.0	1.4	0.2	chr5	158382394	158382495	(23155764)	+	MIRb	SINE/MIR	27	129	(133)	3274504
1478	26.0	10.9	4.2	chr5	158382509	158382966	(23155293)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	44	3274505
314	28.0	15.5	2.8	chr5	158385102	158385281	(23152978)	+	MLT1M	LTR/ERVL-MaLR	23	229	(443)	3274509
880	24.1	6.0	5.0	chr5	158457140	158457419	(23080840)	C	L2a	LINE/L2	(18)	3408	3126	3274629
272	34.6	4.2	5.4	chr5	159341792	159341959	(22196300)	C	MIR1_Amn	SINE/MIR	(0)	230	65	3275939
396	32.7	23.1	1.0	chr5	159342137	159342448	(22195811)	C	L2b	LINE/L2	(19)	3356	2955	3275940
1657	17.9	2.9	0.0	chr5	159516101	159516401	(22021858)	C	AluJo	SINE/Alu	(0)	312	2	3276250
520	27.4	1.4	1.4	chr5	159735073	159735220	(21803039)	+	MIRb	SINE/MIR	107	254	(14)	3276620
234	3.5	0.0	0.0	chr5	159735282	159735310	(21802949)	C	MADE1	DNA/TcMar-Mariner	(30)	50	22	3276621
562	6.4	2.5	0.0	chr5	159735337	159735414	(21802845)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	3276622
14	9.6	0.0	0.0	chr5	159773408	159773430	(21764829)	+	(GCG)n	Simple_repeat	1	23	(0)	3276694
2199	12.4	0.0	0.0	chr5	159778944	159779242	(21759017)	+	AluSz	SINE/Alu	5	303	(9)	3276707
357	27.8	5.0	0.0	chr5	159826366	159826495	(21711764)	+	MIR3	SINE/MIR	59	194	(68)	3276794
503	29.6	6.0	0.5	chr5	159855620	159855809	(21682450)	+	MIRc	SINE/MIR	37	237	(31)	3276847
26	12.1	0.0	0.0	chr5	160421951	160421995	(21116264)	+	(GGGCTG)n	Simple_repeat	1	45	(0)	3278133
13	11.1	3.2	3.1	chr5	164202997	164203027	(17335232)	+	(AAT)n	Simple_repeat	1	32	(0)	3283683
15	13.4	9.8	1.8	chr5	164335777	164335827	(17202432)	+	GA-rich	Low_complexity	1	56	(0)	3283849
548	30.4	4.4	2.9	chr5	167699762	167700005	(13838254)	C	MIR	SINE/MIR	(13)	249	2	3288728
526	25.3	4.4	2.2	chr5	168315211	168315388	(13222871)	+	MER5A	DNA/hAT-Charlie	7	188	(1)	3289773
487	34.2	5.4	0.7	chr5	168364037	168364241	(13174018)	C	MIRb	SINE/MIR	(14)	254	42	3289877
193	34.5	5.5	3.2	chr5	168364522	168364644	(13173615)	+	L2b	LINE/L2	3239	3364	(11)	3289878
16	21.4	0.0	0.0	chr5	168366173	168366210	(13172049)	+	(GTGT)n	Simple_repeat	1	38	(0)	3289879
477	30.5	10.4	2.6	chr5	168410033	168410261	(13127998)	C	MIRb	SINE/MIR	(0)	268	20	3289983
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
5457	11.7	2.9	3.0	chr5	169626500	169626827	(11911432)	+	Tigger1	DNA/TcMar-Tigger	2085	2417	(1)	3292087
413	26.9	16.8	3.3	chr5	169626830	169627141	(11911118)	+	MLT1J1	LTR/ERVL-MaLR	70	475	(37)	3292090
189	30.9	14.6	2.4	chr5	169743118	169743243	(11795016)	C	L3b	LINE/CR1	(92)	5140	4997	3292284
734	18.6	0.0	0.8	chr5	169743290	169743413	(11794846)	+	FLAM_A	SINE/Alu	1	123	(19)	3292285
1096	34.6	8.7	3.7	chr5	170466895	170467346	(11070913)	C	L2b	LINE/L2	(1241)	2178	1718	3293654
254	29.2	12.4	2.4	chr5	170491788	170491910	(11046349)	+	MIR3	SINE/MIR	40	176	(32)	3293706
339	29.9	10.3	3.4	chr5	171388725	171388932	(10149327)	C	MIRb	SINE/MIR	(16)	252	29	3295187
593	20.8	5.5	0.0	chr5	171408990	171409109	(10129150)	C	FLAM_C	SINE/Alu	(16)	127	1	3295224
1270	14.0	19.4	0.0	chr5	171409318	171409553	(10128706)	+	AluSz6	SINE/Alu	1	293	(19)	3295225
214	34.8	10.1	1.1	chr5	171985100	171985288	(9552971)	+	L2c	LINE/L2	2660	2867	(552)	3296414
1640	16.6	0.7	6.5	chr5	171985354	171985476	(9552783)	+	AluJr	SINE/Alu	12	134	(178)	3296415
1596	16.9	1.7	6.2	chr5	171985477	171985783	(9552476)	+	AluJr	SINE/Alu	1	293	(19)	3296416
189	31.4	1.9	11.3	chr5	172443558	172443672	(9094587)	+	L2c	LINE/L2	3283	3386	(1)	3297450
377	27.3	9.0	4.0	chr5	172955770	172955895	(8582364)	C	MIRb	SINE/MIR	(94)	174	42	3298597
2665	2.7	0.0	0.0	chr5	172958945	172959238	(8579021)	+	AluY	SINE/Alu	5	298	(13)	3298606
844	28.3	9.3	1.8	chr5	173455081	173455503	(8082756)	+	MLT1F1	LTR/ERVL-MaLR	60	505	(44)	3299633
28	20.1	0.0	0.0	chr5	173616546	173616603	(7921656)	+	(GGC)n	Simple_repeat	1	58	(0)	3299921
346	33.6	3.6	3.7	chr5	174355259	174355484	(7182775)	C	MIRb	SINE/MIR	(30)	238	13	3301343
1129	35.1	10.5	1.4	chr5	175245318	175246595	(6291664)	C	L2a	LINE/L2	(4)	3422	2002	3303081
329	26.6	15.2	0.8	chr5	175922144	175922272	(5615987)	+	MIRb	SINE/MIR	30	180	(88)	3304417
949	21.3	5.9	0.4	chr5	175922532	175922771	(5615488)	+	HAL1	LINE/L1	125	378	(2129)	3304418
345	30.1	2.2	1.5	chr5	176438913	176439047	(5099212)	C	LTR16D	LTR/ERVL	(19)	632	497	3305253
1269	24.0	0.4	2.4	chr5	176439194	176439480	(5098779)	+	AluJb	SINE/Alu	2	282	(30)	3305254
492	24.8	7.3	1.2	chr5	177494088	177494295	(4043964)	C	MIR	SINE/MIR	(36)	232	12	3307526
273	30.1	5.7	0.5	chr5	177494366	177494475	(4043784)	C	MIR3	SINE/MIR	(47)	161	42	3307527
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
834	10.4	0.0	0.0	chr5	180831416	180831530	(706729)	C	AluSq2	SINE/Alu	(17)	296	182	3313312
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
667	0.0	0.0	0.0	chr5	181221979	181222051	(316208)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	3313889
660	0.0	0.0	0.0	chr5	181222394	181222467	(315792)	C	tRNA-Val-GTG	tRNA	(2)	74	1	3313890
1979	10.3	0.0	3.0	chr5	181244494	181244793	(293466)	+	AluSx1	SINE/Alu	3	293	(19)	3313918
14	25.2	0.0	5.3	chr5	181246451	181246507	(291752)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3313921
471	28.7	8.6	0.6	chr6	1686213	1686394	(169119585)	C	UCON8	DNA	(821)	294	97	3316466
19	11.6	0.0	0.0	chr6	2765183	2765210	(168040769)	+	(C)n	Simple_repeat	1	28	(0)	3317888
14433	13.0	3.9	1.8	chr6	3061508	3061829	(167744150)	+	Tigger1	DNA/TcMar-Tigger	2087	2415	(3)	3318334
2715	18.5	1.6	8.9	chr6	3061830	3062524	(167743455)	+	L1MB8	LINE/L1	5531	6173	(5)	3318339
429	29.3	7.0	4.5	chr6	3913229	3913487	(166892492)	+	MIRb	SINE/MIR	6	268	(0)	3319634
4081	19.2	6.6	1.3	chr6	3928880	3929713	(166876266)	C	HERVL74-int	LTR/ERVL	(2034)	3651	2771	3319664
6554	18.4	4.1	4.1	chr6	3929707	3929765	(166876214)	C	HERVL74-int	LTR/ERVL	(3192)	2493	2440	3319664
1767	13.0	8.5	0.0	chr6	3929766	3930035	(166875944)	+	AluJb	SINE/Alu	1	295	(17)	3319665
199	15.2	0.0	0.0	chr6	4351915	4351947	(166454032)	+	MIR3	SINE/MIR	167	199	(9)	3320307
207	29.1	5.2	8.3	chr6	4351943	4352062	(166453917)	C	MamTip2	DNA/hAT-Tip100	(79)	226	111	3320308
1614	10.4	20.4	0.0	chr6	8064673	8064942	(162741037)	C	MER44A	DNA/TcMar-Tigger	(0)	339	1	3326106
2426	14.5	4.5	0.0	chr6	9520308	9520714	(161285265)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3328204
23	18.9	0.0	0.0	chr6	11207335	11207383	(159598596)	+	(TGTGTG)n	Simple_repeat	1	49	(0)	3330893
15	11.7	0.0	0.0	chr6	11318328	11318355	(159487624)	+	(GAAAA)n	Simple_repeat	1	28	(0)	3331057
13	24.7	0.0	0.0	chr6	11318347	11318381	(159487598)	+	GA-rich	Low_complexity	1	35	(0)	3331058
18	12.2	0.0	0.0	chr6	11609827	11609853	(159196126)	+	(CA)n	Simple_repeat	1	27	(0)	3331464
200	27.5	0.0	10.4	chr6	11613801	11613877	(159192102)	C	MIRb	SINE/MIR	(80)	188	120	3331473
466	29.6	5.3	1.4	chr6	11614126	11614315	(159191664)	+	MIR3	SINE/MIR	6	197	(11)	3331474
20	11.2	0.0	0.0	chr6	12011271	12011299	(158794680)	+	(C)n	Simple_repeat	1	29	(0)	3332070
221	33.5	16.7	3.8	chr6	12148562	12148800	(158657179)	C	MamRTE1	LINE/RTE-BovB	(1383)	2429	2154	3332239
1785	15.0	2.5	3.0	chr6	12576057	12576420	(158229559)	+	Charlie1	DNA/hAT-Charlie	2348	2709	(72)	3332876
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
660	17.9	3.3	1.4	chr6	13328956	13329102	(157476877)	C	MER89	LTR/ERV1	(409)	150	1	3334061
394	24.2	4.6	2.2	chr6	13329104	13329267	(157476712)	C	MER5C	DNA/hAT-Charlie	(122)	191	69	3334062
4524	17.4	3.0	2.1	chr6	13992628	13993271	(156812708)	C	L1MC3	LINE/L1	(313)	7472	6818	3335261
2262	9.9	0.0	0.0	chr6	16215842	16216152	(154589827)	C	AluSx	SINE/Alu	(0)	312	1	3339173
440	25.6	15.3	0.6	chr6	16397889	16398049	(154407930)	C	MIRb	SINE/MIR	(67)	201	13	3339465
745	15.9	4.5	6.4	chr6	16523412	16523568	(154282411)	C	AluJo	SINE/Alu	(73)	239	86	3339635
39	1.8	5.0	3.2	chr6	16761485	16761544	(154044435)	+	(CTC)n	Simple_repeat	1	63	(0)	3340017
26	17.1	3.4	0.0	chr6	16761548	16761606	(154044373)	+	(CGCT)n	Simple_repeat	1	61	(0)	3340018
262	29.1	13.0	7.1	chr6	16910242	16910305	(153895674)	+	LTR81B	LTR/Gypsy	1072	1132	(261)	3340241
469	29.1	0.0	0.0	chr6	16910306	16910415	(153895564)	C	MER81	DNA/hAT-Blackjack	(4)	110	1	3340243
262	29.1	13.0	7.1	chr6	16910416	16910631	(153895348)	+	LTR81B	LTR/Gypsy	1133	1371	(22)	3340241
1369	20.5	11.1	1.8	chr6	17014054	17014299	(153791680)	+	MLT1D	LTR/ERVL-MaLR	13	276	(229)	3340415
2384	7.8	1.0	1.0	chr6	17702918	17703226	(153102753)	+	AluSx	SINE/Alu	1	309	(3)	3341631
16	8.7	4.0	0.0	chr6	17962733	17962757	(152843222)	+	(CT)n	Simple_repeat	1	26	(0)	3342142
258	26.9	4.9	0.0	chr6	18405912	18405989	(152399990)	C	L3	LINE/CR1	(1)	4098	4017	3343016
394	37.4	10.8	0.6	chr6	19668678	19668860	(151137119)	+	MamTip2	DNA/hAT-Tip100	2	205	(100)	3344746
206	22.7	10.6	0.0	chr6	20187250	20187324	(150618655)	+	MIRc	SINE/MIR	66	149	(59)	3345558
455	27.3	13.3	2.8	chr6	20534064	20534278	(150271701)	+	MIRb	SINE/MIR	2	242	(26)	3346237
255	18.6	9.2	0.0	chr6	20811286	20811344	(149994635)	+	LTR65	LTR/ERV1	321	385	(284)	3346658
1813	25.4	6.7	5.5	chr6	20811418	20811824	(149994155)	C	L1MC5a	LINE/L1	(415)	2362	1944	3346659
820	26.3	8.8	0.7	chr6	22892541	22892812	(147913167)	C	MLT1M	LTR/ERVL-MaLR	(229)	443	148	3349886
542	31.0	5.6	10.9	chr6	25172811	25172961	(145633018)	+	L2b	LINE/L2	2002	2144	(1275)	3353188
706	35.1	5.5	5.1	chr6	25173012	25173675	(145632304)	+	L2b	LINE/L2	2678	3380	(46)	3353188
382	26.5	1.9	15.2	chr6	25174199	25174376	(145631603)	C	MIR3	SINE/MIR	(9)	199	46	3353192
24	6.9	0.0	0.0	chr6	25193493	25193523	(145612456)	+	(A)n	Simple_repeat	1	31	(0)	3353223
211	34.2	0.0	5.0	chr6	25342755	25342834	(145463145)	+	L3b	LINE/CR1	5153	5228	(4)	3353495
16	9.3	0.0	0.0	chr6	25343310	25343332	(145462647)	+	(T)n	Simple_repeat	1	23	(0)	3353496
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
242	26.7	9.7	1.5	chr6	25993070	25993202	(144812777)	C	L1ME3Cz	LINE/L1	(16)	981	837	3354453
1827	15.2	1.4	0.7	chr6	26021059	26021347	(144784632)	+	AluSx1	SINE/Alu	1	291	(21)	3354504
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
2145	9.0	8.1	1.4	chr6	26125750	26126038	(144679941)	C	AluSq	SINE/Alu	(3)	310	1	3354669
14	13.2	2.9	2.8	chr6	26156401	26156435	(144649544)	+	(CTGCCC)n	Simple_repeat	1	36	(0)	3354734
730	22.1	9.5	6.8	chr6	26205551	26205846	(144600133)	+	LOR1b	LTR/ERV1	3	307	(154)	3354820
2234	11.6	0.0	0.7	chr6	26217845	26218147	(144587832)	+	AluSg	SINE/Alu	1	301	(9)	3354843
1969	12.7	0.0	6.3	chr6	26222515	26222830	(144583149)	+	AluSz	SINE/Alu	1	296	(16)	3354854
362	24.8	4.7	3.2	chr6	26222831	26222911	(144583068)	C	Charlie5	DNA/hAT-Charlie	(2546)	78	1	3354853
1955	9.5	2.5	1.8	chr6	26233358	26233640	(144572339)	C	AluSg	SINE/Alu	(20)	290	6	3354868
13	13.7	2.9	2.9	chr6	26234147	26234180	(144571799)	+	(CACCC)n	Simple_repeat	1	35	(0)	3354869
1553	16.2	1.0	5.4	chr6	26249689	26250003	(144555976)	C	AluSz	SINE/Alu	(11)	301	1	3354891
651	0.0	0.0	0.0	chr6	26286526	26286597	(144519382)	+	tRNA-Met-i	tRNA	1	72	(3)	3354954
306	19.7	7.6	0.0	chr6	26309638	26309698	(144496281)	C	tRNA-Gln-CAA	tRNA	(5)	70	5	3354994
651	0.0	0.0	0.0	chr6	26313124	26313195	(144492784)	C	tRNA-Met-i	tRNA	(3)	72	1	3354999
651	0.0	0.0	0.0	chr6	26330301	26330372	(144475607)	C	tRNA-Met-i	tRNA	(3)	72	1	3355038
3988	15.5	4.7	0.1	chr6	26351430	26352101	(144453878)	+	MER44D	DNA/TcMar-Tigger	1	704	(1)	3355089
686	0.0	0.0	0.0	chr6	26538054	26538127	(144267852)	+	tRNA-Val-GTG	tRNA	1	74	(2)	3355428
4810	13.4	10.5	4.0	chr6	26956056	26957143	(143848836)	C	LTR12E	LTR/ERV1	(155)	1167	1	3356080
614	1.4	0.0	0.0	chr6	27091742	27091813	(143714166)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	3356276
631	27.9	7.0	9.0	chr6	27127448	27127903	(143678076)	C	L1MC5a	LINE/L1	(0)	2777	2332	3356339
2297	10.4	1.7	0.0	chr6	27131478	27131766	(143674213)	+	AluSx	SINE/Alu	2	295	(17)	3356344
988	21.0	12.9	2.6	chr6	27168511	27168680	(143637299)	+	LTR37A	LTR/ERV1	1	199	(227)	3356413
2199	16.4	2.6	5.7	chr6	27168681	27169120	(143636859)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3356414
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
720	19.3	9.3	0.0	chr6	27830771	27830936	(142975043)	+	AluJr	SINE/Alu	1	183	(129)	3357669
418	25.8	15.0	1.9	chr6	27871082	27871243	(142934736)	C	L1PB4	LINE/L1	(23)	6133	5947	3357736
1918	7.4	1.9	0.8	chr6	27871264	27871519	(142934460)	C	AluSc8	SINE/Alu	(16)	295	37	3357737
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
2194	9.6	2.3	1.0	chr6	27890943	27891243	(142914736)	C	AluSz	SINE/Alu	(7)	305	1	3357782
532	32.0	1.1	4.2	chr6	28137529	28137717	(142668262)	+	MIRb	SINE/MIR	27	209	(59)	3358132
749	0.0	0.0	0.0	chr6	28213037	28213118	(142592861)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3358258
775	21.6	5.0	13.0	chr6	28442676	28442936	(142363043)	+	MIR	SINE/MIR	3	241	(21)	3358624
495	14.9	4.1	1.1	chr6	28443672	28443766	(142362213)	C	MIR	SINE/MIR	(51)	211	114	3358625
10151	11.8	4.0	0.2	chr6	28865488	28867004	(141938975)	C	LTR12C	LTR/ERV1	(0)	1579	3	3359357
2564	4.0	1.0	0.3	chr6	28895821	28896121	(141909858)	C	AluY	SINE/Alu	(6)	305	3	3359410
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
933	21.5	1.3	11.3	chr6	30598806	30599061	(140206918)	C	AluJo	SINE/Alu	(82)	230	1	3361880
1891	13.6	4.5	0.0	chr6	30599097	30599375	(140206604)	C	AluSx1	SINE/Alu	(19)	293	2	3361881
1929	15.4	1.7	0.3	chr6	30599376	30599667	(140206312)	C	AluJo	SINE/Alu	(7)	305	10	3361882
200	23.4	8.6	4.5	chr6	30599679	30599745	(140206234)	C	MIRc	SINE/MIR	(162)	106	37	3361883
317	28.1	15.4	5.0	chr6	30673180	30673381	(140132598)	C	L2a	LINE/L2	(3)	3423	3197	3362001
284	34.2	4.8	1.9	chr6	30681971	30682131	(140123848)	C	X7C_LINE	LINE/CR1	(36)	200	35	3362018
391	24.4	4.7	0.0	chr6	30725854	30725935	(140080044)	C	AluJb	SINE/Alu	(79)	233	148	3362088
282	21.4	6.7	4.5	chr6	30726051	30726138	(140079841)	+	MER5A	DNA/hAT-Charlie	18	107	(82)	3362089
1172	13.6	4.4	15.2	chr6	30726257	30726552	(140079427)	+	AluJb	SINE/Alu	3	275	(37)	3362090
329	31.9	4.0	1.6	chr6	30769917	30770037	(140035942)	C	HAL1b	LINE/L1	(31)	2390	2267	3362189
364	30.6	10.2	2.7	chr6	30781620	30781846	(140024133)	C	MIRc	SINE/MIR	(15)	253	1	3362216
317	33.0	0.0	2.8	chr6	31008024	31008129	(139797850)	+	MamRep1879	DNA/hAT-Tip100?	1	103	(113)	3362639
3243	13.8	1.8	0.6	chr6	31057564	31058052	(139747927)	C	LTR42	LTR/ERVL	(0)	495	1	3362716
2265	7.3	0.7	0.3	chr6	31400352	31400638	(139405341)	+	AluSp	SINE/Alu	1	288	(25)	3363278
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
356	31.6	1.0	0.0	chr6	31703600	31703694	(139102285)	+	L1ME3E	LINE/L1	4384	4479	(1667)	3363745
283	20.6	0.0	2.9	chr6	31739518	31739587	(139066392)	C	MIR	SINE/MIR	(6)	256	189	3363801
14	25.2	2.1	0.0	chr6	32130213	32130259	(138675720)	+	G-rich	Low_complexity	1	48	(0)	3364426
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
16	26.1	4.6	3.3	chr6	33208607	33208693	(137597286)	+	(GGCGGC)n	Simple_repeat	1	91	(0)	3365977
247	28.0	14.2	2.1	chr6	33454055	33454248	(137351731)	+	MIRb	SINE/MIR	20	253	(15)	3366469
364	29.5	12.1	3.8	chr6	33770933	33771117	(137034862)	C	MIRb	SINE/MIR	(24)	206	3	3367115
197	30.2	0.0	5.5	chr6	33886848	33886938	(136919041)	C	L2b	LINE/L2	(186)	3189	3104	3367277
39	27.9	2.1	2.0	chr6	34392500	34392642	(136413337)	+	(CCG)n	Simple_repeat	1	146	(0)	3368274
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
14	21.0	1.8	5.4	chr6	35391212	35391266	(135414713)	+	(TTAATAT)n	Simple_repeat	1	56	(0)	3370271
518	29.4	3.5	1.8	chr6	35391269	35391561	(135414418)	C	L1MC4	LINE/L1	(507)	7535	7347	3370272
16	8.3	0.0	0.0	chr6	35728127	35728152	(135077827)	+	(CGGG)n	Simple_repeat	1	26	(0)	3371015
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
244	33.8	8.2	0.6	chr6	36616873	36617030	(134188949)	C	MIR3	SINE/MIR	(20)	188	18	3372922
46	2.3	0.0	0.0	chr6	36680308	36680351	(134125628)	+	(GT)n	Simple_repeat	1	44	(0)	3373075
309	30.3	3.6	7.0	chr6	36885543	36885684	(133920295)	+	L2a	LINE/L2	3286	3422	(4)	3373498
14	17.1	1.9	7.4	chr6	37169943	37169995	(133635984)	+	(GGCCGG)n	Simple_repeat	1	54	(0)	3374135
23	24.5	3.5	2.3	chr6	37170158	37170242	(133635737)	+	(GGC)n	Simple_repeat	1	88	(0)	3374136
806	28.5	2.7	6.3	chr6	37312069	37312338	(133493641)	+	MER103C	DNA/hAT-Charlie	36	295	(2)	3374467
679	24.3	7.5	1.4	chr6	37630229	37630441	(133175538)	+	MLT1M	LTR/ERVL-MaLR	21	247	(425)	3375035
298	27.3	7.9	0.0	chr6	37630453	37630580	(133175399)	+	MLT1M	LTR/ERVL-MaLR	283	421	(251)	3375035
1531	23.1	12.5	2.1	chr6	37630635	37631104	(133174875)	C	MLT1H1	LTR/ERVL-MaLR	(7)	584	1	3375036
1018	23.8	8.8	1.1	chr6	38248881	38249249	(132556730)	+	L1M6	LINE/L1	1488	1930	(789)	3376090
1848	15.4	0.3	4.1	chr6	38249251	38249543	(132556436)	C	AluJr	SINE/Alu	(8)	304	23	3376091
245	32.1	2.8	6.0	chr6	38346683	38346831	(132459148)	+	AmnSINE1	SINE/5S-Deu-L2	244	387	(188)	3376226
2331	29.3	14.2	0.9	chr6	42200025	42200939	(128605040)	+	L2a	LINE/L2	2014	3085	(341)	3382770
273	23.9	0.0	1.5	chr6	42338959	42339026	(128466953)	+	LTR67B	LTR/ERVL	55	121	(499)	3383046
18	29.7	0.0	1.5	chr6	42782599	42782665	(128023314)	+	G-rich	Low_complexity	1	67	(0)	3384024
20	25.6	2.6	2.5	chr6	42782747	42782824	(128023155)	+	G-rich	Low_complexity	1	80	(0)	3384025
14	27.2	2.0	0.0	chr6	43510376	43510424	(127295555)	+	(CGGCCC)n	Simple_repeat	1	50	(0)	3385490
12	16.4	5.9	0.0	chr6	44246276	44246309	(126559670)	+	(CATCC)n	Simple_repeat	1	36	(0)	3386851
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
289	25.0	5.0	8.2	chr6	44661213	44661367	(126144612)	+	L2c	LINE/L2	3203	3324	(63)	3387583
249	28.8	18.0	0.5	chr6	44663184	44663375	(126142604)	+	Tigger15a	DNA/TcMar-Tigger	286	518	(197)	3387586
50	0.0	0.0	0.0	chr6	48430628	48430670	(122375309)	+	(AC)n	Simple_repeat	1	43	(0)	3393146
12	8.5	9.8	4.4	chr6	52504725	52504765	(118301214)	+	(GCA)n	Simple_repeat	1	45	(0)	3398623
14	15.8	4.3	4.2	chr6	52504774	52504819	(118301160)	+	G-rich	Low_complexity	1	48	(0)	3398624
263	34.9	8.8	1.2	chr6	52517702	52517869	(118288110)	C	MamSINE1	SINE/tRNA-RTE	(70)	220	39	3398640
208	35.9	9.9	4.2	chr6	52517976	52518309	(118287670)	C	L2c	LINE/L2	(2)	3385	3031	3398641
11	9.4	11.8	0.0	chr6	52551796	52551829	(118254150)	+	GA-rich	Low_complexity	1	38	(0)	3398704
3493	13.7	8.6	0.9	chr6	53041593	53042150	(117763829)	+	MER6A	DNA/TcMar-Tigger	1	605	(0)	3399446
530	23.1	8.3	6.5	chr6	53042151	53042173	(117763806)	+	MER58A	DNA/hAT-Charlie	183	203	(21)	3399445
218	35.6	4.7	0.0	chr6	53545434	53545534	(117260445)	+	MIRb	SINE/MIR	2	107	(161)	3400327
204	36.5	2.6	1.3	chr6	54335843	54335917	(116470062)	+	MamTip2	DNA/hAT-Tip100	8	83	(222)	3401492
407	32.4	2.8	0.0	chr6	54336120	54336258	(116469721)	+	MIR	SINE/MIR	116	258	(4)	3401493
183	39.6	6.0	4.6	chr6	54366709	54366970	(116439009)	C	L2b	LINE/L2	(191)	3184	2919	3401538
548	27.9	4.0	14.1	chr6	55882837	55883091	(114922888)	+	MIRc	SINE/MIR	2	229	(39)	3403460
2834	19.1	1.6	0.4	chr6	56335231	56335782	(114470197)	+	MER89	LTR/ERV1	1	559	(0)	3404050
260	26.6	0.0	6.0	chr6	56336026	56336109	(114469870)	C	MIRb	SINE/MIR	(2)	266	188	3404051
679	26.8	3.8	0.0	chr6	56356452	56356630	(114449349)	C	MamGypsy2-I	LTR/Gypsy	(1078)	3088	2903	3404082
769	31.7	9.8	1.3	chr6	56356623	56357162	(114448817)	C	MamGypsy2-I	LTR/Gypsy	(2744)	1422	832	3404082
401	31.1	5.8	1.0	chr6	56357492	56357689	(114448290)	+	MamGypsy2-I	LTR/Gypsy	1078	1285	(2881)	3404085
1382	20.3	12.7	1.4	chr6	56357716	56358154	(114447825)	+	Kanga1	DNA/TcMar-Tc2	1213	1708	(37)	3404086
217	26.3	15.9	0.0	chr6	56528562	56528656	(114277323)	C	LFSINE_Vert	SINE/tRNA	(198)	261	149	3404275
2385	7.2	0.3	5.3	chr6	56729309	56729626	(114076353)	+	AluSp	SINE/Alu	1	302	(11)	3404521
2372	11.2	0.0	0.0	chr6	56766526	56766830	(114039149)	C	AluSx	SINE/Alu	(7)	305	1	3404585
1209	29.5	4.9	7.3	chr6	56767181	56767334	(114038645)	C	L2a	LINE/L2	(0)	3426	3269	3404586
333	25.2	9.2	1.6	chr6	56869206	56869326	(113936653)	+	L1MEd	LINE/L1	20	150	(6936)	3404734
655	27.3	14.3	6.7	chr6	56938602	56939032	(113866947)	+	MLT1H	LTR/ERVL-MaLR	4	549	(0)	3404873
1809	21.4	4.9	2.8	chr6	57263229	57263685	(113542294)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3405374
2399	9.8	0.0	0.9	chr6	57314233	57314547	(113491432)	+	AluSx1	SINE/Alu	1	312	(0)	3405444
322	35.2	3.0	1.5	chr6	63527615	63527744	(107278235)	C	MIR3	SINE/MIR	(56)	152	21	3410714
2462	9.2	0.3	0.0	chr6	63804011	63804315	(107001664)	C	AluSp	SINE/Alu	(7)	306	1	3411130
621	31.3	6.2	1.7	chr6	63804316	63804528	(107001451)	C	MIR	SINE/MIR	(33)	229	7	3411129
713	33.9	3.8	0.6	chr6	63804540	63804869	(107001110)	C	L2a	LINE/L2	(350)	3069	2729	3411128
1394	23.3	11.5	3.0	chr6	63897244	63897704	(106908275)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3411217
1858	15.0	2.0	6.2	chr6	63904886	63905255	(106900724)	C	L1MB5	LINE/L1	(10)	6164	5811	3411227
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
912	25.5	3.7	0.0	chr6	72552974	72553181	(98252798)	C	MER58A	DNA/hAT-Charlie	(8)	216	1	3422018
19	8.8	2.6	2.6	chr6	72554318	72554355	(98251624)	+	(AATG)n	Simple_repeat	1	39	(0)	3422019
227	25.8	9.3	4.0	chr6	72749001	72749101	(98056878)	+	AmnSINE1	SINE/5S-Deu-L2	246	352	(223)	3422280
2292	7.4	1.1	0.3	chr6	73514185	73514468	(97291511)	C	AluY	SINE/Alu	(24)	287	2	3423639
957	17.0	23.6	0.0	chr6	73514470	73514693	(97291286)	C	AluSc8	SINE/Alu	(18)	293	1	3423640
36	5.3	0.0	0.0	chr6	73580860	73580899	(97225080)	+	(GT)n	Simple_repeat	1	40	(0)	3423810
7169	4.6	0.0	0.0	chr6	73709600	73710520	(97095459)	+	L1PA5	LINE/L1	3648	4568	(1578)	3424107
1483	23.1	1.5	0.3	chr6	73710773	73711106	(97094873)	C	MER58B	DNA/hAT-Charlie	(0)	341	4	3424108
344	30.1	4.7	4.1	chr6	73789010	73789179	(97016800)	+	MER5A	DNA/hAT-Charlie	3	184	(5)	3424231
912	17.9	0.0	7.2	chr6	73789296	73789459	(97016520)	C	L1MA7	LINE/L1	(10)	6281	6131	3424232
2487	5.7	0.0	2.3	chr6	73789460	73789759	(97016220)	C	AluY	SINE/Alu	(18)	293	1	3424233
16	0.0	0.0	0.0	chr6	73803526	73803543	(97002436)	+	(TG)n	Simple_repeat	1	18	(0)	3424263
21	4.0	0.0	0.0	chr6	73803687	73803712	(97002267)	+	(GT)n	Simple_repeat	1	26	(0)	3424264
601	24.1	14.4	5.4	chr6	73803856	73804227	(97001752)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	3424265
2014	27.2	11.8	2.0	chr6	75385948	75386790	(95419189)	+	MamGypsy2-I	LTR/Gypsy	3169	4104	(62)	3426142
1030	31.7	5.0	1.7	chr6	77034063	77034470	(93771509)	C	LTR16C	LTR/ERVL	(66)	423	2	3428351
849	32.3	4.7	5.0	chr6	78599002	78599340	(92206639)	+	LTR16	LTR/ERVL	1	338	(100)	3430192
15	13.9	3.0	0.0	chr6	82363193	82363203	(88442776)	+	(TCTTTC)n	Simple_repeat	1	33	(0)	3435070
17	5.0	0.0	0.0	chr6	82363204	82363224	(88442755)	+	(TC)n	Simple_repeat	1	21	(0)	3435071
791	20.2	5.0	8.3	chr6	82875730	82875934	(87930045)	C	MER58A	DNA/hAT-Charlie	(26)	198	1	3435728
268	32.5	8.4	1.2	chr6	82876007	82876252	(87929727)	+	CR1-L3A_Croc	LINE/CR1	3728	3909	(379)	3435729
2334	29.3	5.6	1.7	chr6	84575178	84576675	(86229304)	+	ERVL-E-int	LTR/ERVL	1177	2735	(2932)	3438012
378	35.0	2.8	1.4	chr6	84645677	84645885	(86160094)	C	L4_C_Mam	LINE/RTE-X	(1756)	3382	3171	3438093
524	27.3	4.9	0.7	chr6	85464135	85464289	(85341690)	+	MIR	SINE/MIR	8	169	(93)	3439096
303	34.0	15.1	2.4	chr6	85464513	85465048	(85340931)	C	L2	LINE/L2	(455)	2964	2349	3439097
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
350	24.2	0.1	0.0	chr6	85679445	85679519	(85126460)	C	MIRc	SINE/MIR	(53)	155	81	3439431
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
655	35.1	7.9	5.2	chr6	87590481	87590888	(83215091)	C	L2b	LINE/L2	(33)	3342	2923	3441830
482	25.6	4.8	2.0	chr6	87723262	87723414	(83082565)	+	MLT1O	LTR/ERVL-MaLR	94	328	(344)	3442078
1977	26.9	10.7	2.5	chr6	90043988	90045032	(80760947)	C	L2a	LINE/L2	(1)	3425	2275	3445825
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
2363	8.7	0.7	0.0	chr6	96896925	96897224	(73908755)	C	AluSx	SINE/Alu	(10)	302	1	3454285
259	22.9	6.3	7.8	chr6	96939150	96939277	(73866702)	+	Charlie26a	DNA/hAT-Charlie	54	179	(146)	3454342
325	36.1	5.0	9.3	chr6	96939283	96939615	(73866364)	C	L2b	LINE/L2	(6)	3369	3052	3454343
543	35.1	11.9	4.7	chr6	96939805	96940513	(73865466)	C	L2b	LINE/L2	(631)	2788	2022	3454343
282	26.9	10.0	0.8	chr6	96940551	96940749	(73865230)	+	MamGypLTR1d	LTR/Gypsy	567	810	(3)	3454344
1511	28.6	7.5	0.9	chr6	97322297	97322821	(73483158)	+	LTR16E2	LTR/ERVL	7	568	(0)	3454840
732	6.2	45.9	3.6	chr6	99394273	99394485	(71411494)	C	AluSx	SINE/Alu	(9)	303	1	3457559
290	31.1	5.8	7.7	chr6	100202972	100203180	(70602799)	C	LTR81AB	LTR/Gypsy	(67)	211	7	3458705
265	34.1	5.0	3.6	chr6	100203421	100203557	(70602422)	C	L2c	LINE/L2	(0)	3387	3249	3458706
1857	18.2	0.0	0.3	chr6	100203632	100203928	(70602051)	+	AluJb	SINE/Alu	3	298	(14)	3458707
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
196	24.6	12.2	1.5	chr6	105432968	105433033	(65372946)	C	MIR3	SINE/MIR	(52)	156	83	3465411
935	21.0	6.7	0.5	chr6	105433144	105433339	(65372640)	C	MER3	DNA/hAT-Charlie	(0)	209	1	3465412
13	13.3	6.1	0.0	chr6	105593466	105593498	(65212481)	+	G-rich	Low_complexity	1	35	(0)	3465652
249	28.9	7.8	0.0	chr6	105763613	105763695	(65042284)	C	MamRTE1	LINE/RTE-BovB	(3534)	278	189	3465881
367	26.6	1.1	1.1	chr6	106159824	106159918	(64646061)	+	MIR	SINE/MIR	69	163	(99)	3466473
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
425	25.7	8.4	10.6	chr6	108564668	108564837	(62241142)	C	MER5B	DNA/hAT-Charlie	(0)	178	13	3470837
3037	24.4	12.7	6.1	chr6	108737879	108738473	(62067506)	C	Charlie13a	DNA/hAT-Charlie	(248)	1266	589	3471071
249	17.0	3.6	0.0	chr6	110537015	110537067	(60268912)	+	L1M4b	LINE/L1	2207	2261	(4606)	3473814
17	3.5	3.3	0.0	chr6	110700911	110700924	(60105055)	+	(TTAA)n	Simple_repeat	1	15	(0)	3474121
2477	6.3	0.3	0.0	chr6	110700925	110701211	(60104768)	+	AluSg4	SINE/Alu	1	288	(22)	3474122
17	3.5	3.3	0.0	chr6	110701212	110701226	(60104753)	+	(TTAA)n	Simple_repeat	4	18	(0)	3474123
605	13.4	7.0	0.7	chr6	111427284	111427418	(59378561)	+	L1M4	LINE/L1	5188	5331	(815)	3475576
2992	19.4	2.1	1.6	chr6	111427416	111427977	(59378002)	+	L1M3f	LINE/L1	1	565	(4763)	3475577
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
662	29.2	7.7	5.6	chr6	111576391	111576709	(59229270)	+	LTR67B	LTR/ERVL	146	471	(149)	3475857
378	25.3	2.4	0.0	chr6	112204161	112204243	(58601736)	+	L2a	LINE/L2	3315	3399	(27)	3476765
13	20.9	0.0	0.0	chr6	112877737	112877769	(57928210)	+	(TTTTG)n	Simple_repeat	1	33	(0)	3477684
24	6.8	0.0	0.0	chr6	113047042	113047072	(57758907)	+	(AC)n	Simple_repeat	1	31	(0)	3477895
208	36.6	9.3	2.8	chr6	113047161	113047371	(57758608)	C	L2	LINE/L2	(2413)	1006	781	3477896
180	32.8	2.9	1.5	chr6	113182967	113183034	(57622945)	+	MamRTE1	LINE/RTE-BovB	3644	3712	(100)	3478083
359	25.0	1.0	1.0	chr6	113376419	113376515	(57429464)	C	Eulor9C	DNA	(16)	254	158	3478368
18	12.0	0.0	0.0	chr6	113376523	113376549	(57429430)	+	(T)n	Simple_repeat	1	27	(0)	3478369
618	24.9	5.5	1.3	chr6	113384802	113385025	(57420954)	+	Zaphod	DNA/hAT-Tip100	3798	4031	(0)	3478383
1746	17.6	5.5	0.0	chr6	113540175	113540498	(57265481)	+	MER2	DNA/TcMar-Tigger	2	344	(1)	3478637
1067	29.1	7.0	10.0	chr6	113540499	113540647	(57265332)	C	HAL1	LINE/L1	(213)	2294	2148	3478636
2064	15.2	3.2	0.0	chr6	113540648	113540983	(57264996)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	2	3478638
454	30.3	6.1	0.0	chr6	117441109	117441263	(53364716)	+	MIR	SINE/MIR	10	174	(88)	3483894
668	25.4	9.5	2.1	chr6	117441385	117441617	(53364362)	C	L2a	LINE/L2	(8)	3418	3167	3483895
2597	14.3	3.5	0.6	chr6	117448706	117449182	(53356797)	C	L1MB7	LINE/L1	(0)	6184	5694	3483907
1384	18.0	4.5	1.5	chr6	118388368	118388626	(52417353)	C	MER44B	DNA/TcMar-Tigger	(284)	266	1	3485119
408	23.4	1.8	2.6	chr6	118388627	118388732	(52417247)	+	MLT1J1-int	LTR/ERVL-MaLR	189	293	(1094)	3485118
19	9.9	8.3	4.6	chr6	119078776	119078835	(51727144)	+	(CCGCAG)n	Simple_repeat	1	65	(0)	3486086
2870	17.6	2.3	1.4	chr6	119147503	119148054	(51657925)	+	MER89	LTR/ERV1	1	557	(2)	3486212
5949	22.6	7.2	7.5	chr6	119540881	119541852	(51264127)	C	L1MEf	LINE/L1	(5199)	1001	82	3486714
2100	11.9	4.2	1.4	chr6	120005533	120005899	(50800080)	+	THE1D	LTR/ERVL-MaLR	4	381	(0)	3487300
6684	20.0	4.7	6.1	chr6	121699996	121700258	(49105721)	+	L1M4b	LINE/L1	1408	1669	(5198)	3489459
2090	12.6	0.3	0.7	chr6	121700259	121700551	(49105428)	+	AluSx	SINE/Alu	8	299	(13)	3489462
225	28.1	10.7	1.3	chr6	121794736	121794822	(49011157)	C	MIR1_Amn	SINE/MIR	(93)	137	36	3489596
312	33.9	4.6	2.4	chr6	121826517	121826685	(48979294)	C	LTR16	LTR/ERVL	(205)	233	61	3489647
681	29.4	6.5	1.7	chr6	121839155	121839295	(48966684)	+	MIR	SINE/MIR	2	155	(107)	3489664
588	35.6	9.5	3.1	chr6	122696239	122696621	(48109358)	+	MamGypLTR2c	LTR/Gypsy	96	505	(563)	3490733
433	26.1	2.9	2.9	chr6	122788978	122789115	(48016864)	+	PrimLTR79	LTR/ERV1	364	501	(2)	3490849
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
12	16.1	0.0	3.3	chr6	125791095	125791124	(45014855)	+	(CGC)n	Simple_repeat	1	30	(0)	3494828
2518	24.4	11.7	3.6	chr6	126015518	126016430	(44789549)	C	L1MC4	LINE/L1	(144)	7898	6889	3495149
11	28.1	0.0	5.3	chr6	127343105	127343161	(43462818)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	3496758
285	36.2	2.6	3.2	chr6	129498835	129498988	(41306991)	C	LFSINE_Vert	SINE/tRNA	(302)	157	5	3499531
695	14.4	0.9	0.9	chr6	129501881	129501992	(41303987)	C	MER45A	DNA/hAT-Tip100	(0)	178	67	3499535
415	37.8	16.1	1.3	chr6	129640738	129641574	(41164405)	+	L3	LINE/CR1	3109	4093	(6)	3499720
2185	9.3	1.0	0.7	chr6	129863511	129863799	(40942180)	+	AluSq4	SINE/Alu	1	290	(21)	3500043
14	14.5	8.6	3.2	chr6	130325122	130325150	(40480829)	+	(TGTA)n	Simple_repeat	1	32	(0)	3500774
2301	15.9	5.8	11.5	chr6	130325151	130325697	(40480282)	C	MLT2B2	LTR/ERVL	(0)	515	2	3500775
257	24.8	14.0	0.8	chr6	130418251	130418368	(40387611)	+	Tigger15a	DNA/TcMar-Tigger	502	637	(78)	3500882
1360	23.7	9.3	6.9	chr6	130600599	130600946	(40205033)	C	MLT1F	LTR/ERVL-MaLR	(159)	389	12	3501129
274	29.9	11.0	1.9	chr6	130779763	130779919	(40026060)	C	L2a	LINE/L2	(955)	2464	2292	3501390
3830	14.7	8.0	2.5	chr6	131400216	131400982	(39404997)	+	LTR8B	LTR/ERV1	1	813	(7)	3502278
429	34.2	8.8	1.9	chr6	131947040	131947304	(38858675)	C	MamRTE1	LINE/RTE-BovB	(28)	3784	3500	3503154
1759	16.8	5.5	3.5	chr6	131980304	131980642	(38825337)	C	Tigger3a	DNA/TcMar-Tigger	(2)	346	1	3503206
288	30.0	0.0	8.2	chr6	131983056	131983153	(38822826)	+	UCON26	Unknown	228	317	(26)	3503209
323	33.1	9.8	0.0	chr6	131996218	131996352	(38809627)	C	L2a	LINE/L2	(6)	3420	3220	3503236
243	27.9	2.5	1.2	chr6	132131834	132131913	(38674066)	C	UCON78	DNA	(221)	222	142	3503442
30	0.0	0.0	0.0	chr6	133952134	133952162	(36853817)	+	(GGCGT)n	Simple_repeat	1	29	(0)	3505928
266	36.3	12.3	1.3	chr6	134296060	134296218	(36509761)	+	MIRb	SINE/MIR	1	179	(89)	3506609
1450	17.5	0.3	15.2	chr6	134296282	134296623	(36509356)	C	AluJr	SINE/Alu	(21)	291	1	3506610
2750	17.1	1.8	0.9	chr6	134448042	134448603	(36357376)	+	L1MB7	LINE/L1	5618	6184	(0)	3506929
537	29.5	2.1	2.8	chr6	134537452	134537624	(36268355)	+	MIR3	SINE/MIR	3	176	(32)	3507085
209	33.3	4.2	1.0	chr6	134909430	134909586	(35896393)	C	MIRc	SINE/MIR	(0)	208	49	3507666
2821	10.5	0.7	0.0	chr6	135722990	135723389	(35082590)	+	THE1B-int	LTR/ERVL-MaLR	1229	1631	(0)	3508852
567	33.0	11.5	3.1	chr6	135922085	135922537	(34883442)	+	Tigger19b	DNA/TcMar-Tigger	54	549	(1)	3509129
426	33.1	1.2	0.6	chr6	136051210	136051370	(34754609)	+	UCON26	Unknown	114	275	(68)	3509300
18	4.7	0.0	0.0	chr6	136610595	136610616	(34195363)	+	(A)n	Simple_repeat	1	22	(0)	3510157
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
2695	6.4	0.0	1.0	chr6	139587263	139587574	(31218405)	C	AluY	SINE/Alu	(2)	309	1	3514940
19	0.0	0.0	0.0	chr6	139943477	139943497	(30862482)	+	(A)n	Simple_repeat	1	21	(0)	3515445
427	33.5	7.7	3.6	chr6	140043419	140043666	(30762313)	+	AmnSINE1	SINE/5S-Deu-L2	63	321	(254)	3515593
18	19.0	4.3	2.1	chr6	140062319	140062364	(30743615)	+	GA-rich	Low_complexity	1	48	(0)	3515621
248	33.6	2.5	5.6	chr6	140071757	140071882	(30734097)	C	L2b	LINE/L2	(0)	3375	3254	3515634
474	28.2	7.7	2.3	chr6	140226239	140226459	(30579520)	+	MLT1L	LTR/ERVL-MaLR	374	607	(3)	3515811
2831	19.5	7.3	6.5	chr6	141326182	141326862	(29479117)	C	MER44D	DNA/TcMar-Tigger	(6)	699	13	3517118
785	25.2	3.5	0.0	chr6	141452171	141452388	(29353591)	+	L1MD3	LINE/L1	7617	7842	(153)	3517292
5070	7.9	2.4	0.4	chr6	142014659	142015366	(28790613)	+	LTR30	LTR/ERV1	1	722	(0)	3517961
17	7.0	0.0	5.9	chr6	142146996	142147029	(28658950)	+	(AACAA)n	Simple_repeat	1	34	(0)	3518107
325	31.8	11.7	2.1	chr6	142413775	142413899	(28392080)	C	LTR85a	LTR/Gypsy?	(145)	557	410	3518478
591	23.7	2.9	3.4	chr6	142756306	142756480	(28049499)	C	ERV3-16A3_LTR	LTR/ERVL	(246)	176	3	3518946
325	22.4	7.2	1.4	chr6	142756484	142756604	(28049375)	C	MIRc	SINE/MIR	(88)	142	9	3518947
17	16.1	0.0	0.0	chr6	142846273	142846301	(27959678)	+	A-rich	Low_complexity	1	29	(0)	3519058
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
1929	10.9	4.6	4.3	chr6	145964598	145964900	(24841079)	+	AluSx	SINE/Alu	1	304	(8)	3523418
843	32.5	5.0	1.1	chr6	146850513	146850978	(23955001)	C	LTR16C	LTR/ERVL	(0)	489	5	3524588
227	35.5	2.7	0.0	chr6	149011944	149012050	(21793929)	+	Tigger15a	DNA/TcMar-Tigger	10	119	(596)	3527795
290	31.2	2.6	4.3	chr6	149233487	149233603	(21572376)	+	L2c	LINE/L2	3267	3381	(6)	3528095
1173	31.9	7.3	5.5	chr6	149234605	149235498	(21570481)	+	L3	LINE/CR1	2961	3872	(227)	3528092
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
16	32.6	0.0	0.0	chr6	149317603	149317663	(21488316)	+	G-rich	Low_complexity	1	61	(0)	3528246
65	0.0	0.0	0.0	chr6	149847825	149847879	(20958100)	+	(AC)n	Simple_repeat	1	55	(0)	3529293
258	31.4	11.9	0.0	chr6	151060343	151060460	(19745519)	C	L2b	LINE/L2	(0)	3375	3242	3531244
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
17	12.4	2.9	0.0	chr6	151390334	151390368	(19415611)	+	(TCCCCG)n	Simple_repeat	1	36	(0)	3531907
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
250	21.2	1.5	0.0	chr6	152746255	152746320	(18059659)	C	MER44B	DNA/TcMar-Tigger	(33)	517	451	3533955
1436	19.1	0.4	0.0	chr6	152746338	152746578	(18059401)	C	MER44B	DNA/TcMar-Tigger	(308)	242	1	3533955
195	21.4	0.0	0.0	chr6	152952233	152952274	(17853705)	C	L2b	LINE/L2	(0)	3375	3334	3534253
314	33.8	11.2	0.6	chr6	154613264	154613466	(16192513)	+	L2c	LINE/L2	2994	3221	(166)	3536704
1704	19.5	10.3	2.6	chr6	155782351	155782771	(15023208)	+	MER31B	LTR/ERV1	10	466	(0)	3538563
257	34.1	6.7	0.8	chr6	158057447	158057573	(12748406)	C	MIRb	SINE/MIR	(38)	230	96	3541879
321	31.1	2.2	1.5	chr6	158057641	158057777	(12748202)	C	LTR79	LTR/ERVL	(36)	491	354	3541880
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
14	9.0	5.1	4.9	chr6	158560180	158560218	(12245761)	+	G-rich	Low_complexity	1	41	(0)	3542742
344	33.8	7.0	1.5	chr6	158654588	158654788	(12151191)	C	MIR	SINE/MIR	(18)	244	32	3542884
847	26.6	9.7	13.3	chr6	161038589	161039156	(9766823)	C	MLT1G	LTR/ERVL-MaLR	(2)	589	44	3546136
16	9.3	0.0	0.0	chr6	163416049	163416075	(7389904)	+	(G)n	Simple_repeat	1	27	(0)	3549423
2385	19.5	5.5	2.3	chr6	167855886	167856416	(2949563)	+	MER44B	DNA/TcMar-Tigger	1	549	(1)	3554881
497	34.2	7.8	0.0	chr6	167857259	167857460	(2948519)	+	L3	LINE/CR1	2903	3121	(978)	3554883
741	32.0	5.6	4.3	chr6	169205080	169205519	(1600460)	+	L1MA4	LINE/L1	1358	1983	(5503)	3556244
2364	6.8	0.0	2.0	chr6	169309917	169310208	(1495771)	+	AluY	SINE/Alu	18	303	(8)	3556335
3760	17.0	1.6	2.2	chr6	169310209	169310870	(1495109)	+	L1MA4	LINE/L1	5394	6051	(249)	3556334
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
27	0.0	0.0	0.0	chr6	169702221	169702246	(1103733)	+	(CCCTGC)n	Simple_repeat	1	26	(0)	3556751
18	12.2	0.0	0.0	chr6	170553455	170553481	(252498)	+	(T)n	Simple_repeat	1	27	(0)	3557578
20	0.0	3.7	0.0	chr6	170554089	170554138	(251841)	+	(AAC)n	Simple_repeat	1	51	(0)	3557580
227	0.4	5.0	0.0	chr7	10001	10241	(159335732)	+	(CTAACC)n	Simple_repeat	1	253	(0)	3557857
255	26.8	17.0	0.2	chr7	543541	543699	(158802274)	C	MIRb	SINE/MIR	(48)	220	45	3558482
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
11	10.5	0.0	10.5	chr7	769301	769338	(158576635)	+	(CCTGAG)n	Simple_repeat	1	38	(0)	3558858
17	13.3	0.0	11.3	chr7	975609	975670	(158370303)	+	(GCCCC)n	Simple_repeat	1	62	(0)	3559144
253	22.9	1.6	1.4	chr7	975744	975834	(158370139)	C	MIRc	SINE/MIR	(65)	165	77	3559145
13	14.9	5.1	2.4	chr7	1160308	1160346	(158185627)	+	(CCCGC)n	Simple_repeat	1	41	(0)	3559395
243	31.8	1.8	6.8	chr7	1533061	1533178	(157812795)	C	MIR3	SINE/MIR	(3)	205	94	3560056
452	37.3	2.5	5.6	chr7	2175308	2175591	(157170382)	C	HAL1	LINE/L1	(2220)	287	13	3560870
279	29.6	4.1	2.6	chr7	2175826	2176019	(157169954)	+	L1M5	LINE/L1	3125	3321	(2825)	3560872
1232	14.5	7.9	2.3	chr7	2399736	2399949	(156946024)	+	AluJo	SINE/Alu	86	312	(0)	3561324
14	8.2	3.9	0.0	chr7	2399950	2399975	(156945998)	+	(AACA)n	Simple_repeat	1	27	(0)	3561325
17	15.9	8.2	0.0	chr7	2403446	2403494	(156942479)	+	G-rich	Low_complexity	1	53	(0)	3561339
244	21.4	4.2	0.0	chr7	2522851	2522929	(156823044)	C	MIRc	SINE/MIR	(101)	167	84	3561577
227	18.8	0.0	0.0	chr7	2758183	2758230	(156587743)	C	Charlie1b	DNA/hAT-Charlie	(92)	431	384	3561945
329	30.4	9.8	2.1	chr7	4775036	4775176	(154570797)	+	MIRb	SINE/MIR	109	261	(7)	3565525
16	0.0	0.0	0.0	chr7	5423835	5423851	(153922122)	+	(A)n	Simple_repeat	1	17	(0)	3566997
13	18.4	7.0	0.0	chr7	5423924	5423966	(153922007)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3566998
18	25.1	1.4	5.3	chr7	5424138	5424160	(153921813)	+	(CCT)n	Simple_repeat	1	73	(0)	3566999
13	20.7	6.1	1.9	chr7	5424161	5424209	(153921764)	+	(CCCT)n	Simple_repeat	1	52	(0)	3567000
14	23.8	0.0	2.2	chr7	5424357	5424402	(153921571)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3567001
13	13.5	4.3	6.2	chr7	5634545	5634590	(153711383)	+	(GGCAG)n	Simple_repeat	1	48	(0)	3567506
2024	11.7	1.4	0.3	chr7	5773582	5773864	(153572109)	C	AluSx	SINE/Alu	(26)	286	1	3567775
1466	10.0	0.0	2.3	chr7	6306239	6306453	(153039520)	+	THE1B	LTR/ERVL-MaLR	155	364	(0)	3569013
2063	15.9	4.4	3.8	chr7	6306460	6306910	(153039063)	+	L1MB3	LINE/L1	5711	6164	(19)	3569014
450	23.8	2.7	10.4	chr7	6453572	6453663	(152892310)	+	MER63C	DNA/hAT-Blackjack	743	828	(102)	3569410
3045	20.1	3.8	2.7	chr7	6453664	6454220	(152891753)	+	MER77	LTR/ERVL	1	574	(30)	3569411
28	14.8	5.8	1.4	chr7	6484058	6484126	(152861847)	+	(GGC)n	Simple_repeat	1	73	(0)	3569479
1983	18.4	7.7	1.8	chr7	7190051	7190503	(152155470)	C	LTR65	LTR/ERV1	(21)	648	167	3570772
227	29.8	0.0	0.0	chr7	7718896	7718952	(151627021)	+	MER5B	DNA/hAT-Charlie	122	178	(0)	3571492
2096	11.3	0.3	4.1	chr7	8064699	8065016	(151280957)	C	AluSc8	SINE/Alu	(5)	306	1	3572016
17732	14.8	2.9	1.1	chr7	8065017	8068069	(151277904)	C	L1PA15	LINE/L1	(1588)	6553	3422	3572013
1732	17.8	9.4	0.7	chr7	12660221	12660627	(146685346)	+	HERVH-int	LTR/ERV1	1	446	(7267)	3577655
15680	13.0	2.1	1.9	chr7	12660762	12663554	(146682419)	+	HERVH-int	LTR/ERV1	801	3601	(4112)	3577655
2468	9.4	0.6	0.3	chr7	12931486	12931838	(146414135)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	3578067
33	0.0	0.0	0.0	chr7	13920442	13920469	(145425504)	+	(GT)n	Simple_repeat	1	28	(0)	3579355
924	29.6	6.0	4.3	chr7	14834366	14834711	(144511262)	+	MLT1I	LTR/ERVL-MaLR	11	362	(49)	3580482
54	0.0	0.0	0.0	chr7	14840700	14840745	(144505228)	+	(AC)n	Simple_repeat	1	46	(0)	3580491
3607	15.5	1.7	6.7	chr7	15198470	15199196	(144146777)	C	LTR8	LTR/ERV1	(0)	691	2	3580952
187	27.5	2.8	2.8	chr7	16420560	16420630	(142925343)	+	L2b	LINE/L2	3287	3357	(18)	3582434
2053	19.5	7.7	1.3	chr7	17372109	17372580	(141973393)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3583803
334	24.7	1.2	1.2	chr7	17405801	17405886	(141940087)	C	MamRep1527	LTR	(849)	120	35	3583855
218	33.7	8.8	2.1	chr7	17405913	17406103	(141939870)	C	L2	LINE/L2	(1280)	2139	1935	3583856
486	21.8	2.9	1.5	chr7	17406112	17406246	(141939727)	+	L1ME3E	LINE/L1	20	156	(6947)	3583857
3603	27.4	15.6	2.3	chr7	18893991	18895542	(140450431)	C	L2a	LINE/L2	(741)	2678	882	3585908
12	11.6	3.3	3.2	chr7	22351121	22351150	(136994823)	+	(TGTTT)n	Simple_repeat	1	31	(0)	3590519
184	27.0	19.6	0.0	chr7	22358108	22358181	(136987792)	+	L2b	LINE/L2	3271	3362	(13)	3590528
334	25.9	9.7	2.1	chr7	22398226	22398367	(136947606)	+	L2c	LINE/L2	3223	3376	(11)	3590594
2492	7.9	0.0	0.0	chr7	22401954	22402258	(136943715)	+	AluSc	SINE/Alu	5	309	(0)	3590606
10243	11.6	3.5	1.3	chr7	22483914	22485489	(136860484)	+	Tigger1	DNA/TcMar-Tigger	693	2305	(113)	3590742
825	18.5	0.0	0.0	chr7	22485492	22485621	(136860352)	C	AluJr	SINE/Alu	(15)	297	168	3590743
1595	17.9	1.9	0.3	chr7	22561003	22561321	(136784652)	+	MER33	DNA/hAT-Charlie	1	324	(0)	3590847
378	29.5	4.3	0.0	chr7	22823056	22823167	(136522806)	+	MIRc	SINE/MIR	19	135	(133)	3591271
2915	16.2	10.3	2.9	chr7	23181485	23181645	(136164328)	C	LTR65	LTR/ERV1	(488)	181	1	3591847
12	20.1	2.9	0.0	chr7	23182167	23182200	(136163773)	+	(GCA)n	Simple_repeat	1	35	(0)	3591849
12	13.0	0.0	9.8	chr7	23471439	23471479	(135874494)	+	G-rich	Low_complexity	1	41	(0)	3592402
396	30.7	15.3	1.5	chr7	24742243	24742444	(134603529)	+	MIRb	SINE/MIR	12	246	(22)	3594308
252	25.4	1.6	1.6	chr7	24821713	24821776	(134524197)	+	MamRep137	DNA/TcMar-Tigger	159	222	(288)	3594436
1198	32.8	16.4	2.3	chr7	24907973	24909168	(134436805)	C	L3	LINE/CR1	(1989)	2110	714	3594576
968	27.1	14.1	2.7	chr7	26181742	26182341	(133163632)	+	L1MEi	LINE/L1	823	1518	(694)	3596572
1846	15.3	0.7	1.4	chr7	26182342	26182629	(133163344)	+	AluSz6	SINE/Alu	1	286	(26)	3596573
968	25.7	8.0	10.5	chr7	26182630	26182809	(133163164)	+	L1MEi	LINE/L1	1519	1750	(5353)	3596572
1679	16.6	4.2	0.4	chr7	26182810	26183086	(133162887)	C	AluJo	SINE/Alu	(24)	288	1	3596574
448	25.0	37.2	6.5	chr7	26183087	26183265	(133162708)	+	L1MEi	LINE/L1	1751	1972	(5131)	3596572
2081	12.6	1.0	0.0	chr7	26183266	26183559	(133162414)	+	AluSz	SINE/Alu	1	297	(15)	3596575
873	5.4	17.3	0.0	chr7	26183990	26184118	(133161855)	+	L1M1	LINE/L1	5568	5723	(580)	3596576
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
2675	18.2	6.8	0.4	chr7	27677895	27678417	(131667556)	C	MER68	LTR/ERVL	(0)	563	5	3598843
360	26.9	11.4	3.4	chr7	28358636	28358812	(130987161)	+	AmnSINE1	SINE/5S-Deu-L2	3	195	(380)	3599934
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
12	22.7	2.3	2.3	chr7	28686205	28686247	(130659726)	+	(TTTTA)n	Simple_repeat	1	44	(0)	3600425
220	17.0	5.4	1.9	chr7	28855978	28856031	(130489942)	C	LFSINE_Vert	SINE/tRNA	(400)	59	4	3600675
12	18.5	0.0	9.6	chr7	30028708	30028759	(129317214)	+	G-rich	Low_complexity	1	52	(0)	3602520
12	32.3	2.4	3.6	chr7	30284934	30285015	(129060958)	+	(GGC)n	Simple_repeat	1	84	(0)	3602922
13	7.1	6.2	2.9	chr7	30594954	30594985	(128750988)	+	(TGCTGC)n	Simple_repeat	1	34	(0)	3603361
271	21.4	3.3	6.3	chr7	30804413	30804507	(128541466)	C	L2c	LINE/L2	(5)	3382	3291	3603701
28	37.7	0.9	0.0	chr7	31776577	31776692	(127569281)	+	(TA)n	Simple_repeat	1	117	(0)	3605191
17	11.6	0.0	0.0	chr7	31776682	31776710	(127569263)	+	(TATT)n	Simple_repeat	1	29	(0)	3605192
1482	3.0	0.0	0.0	chr7	31776988	31777154	(127568819)	+	L1PA4	LINE/L1	5989	6155	(0)	3605193
183	33.9	5.2	5.2	chr7	32163464	32163578	(127182395)	C	MamTip2	DNA/hAT-Tip100	(69)	236	122	3605740
43	25.8	1.5	6.8	chr7	32891819	32892022	(126453951)	+	(CCGC)n	Simple_repeat	1	207	(0)	3606930
11	23.9	6.1	0.0	chr7	33062650	33062698	(126283275)	+	(GCGCTC)n	Simple_repeat	1	52	(0)	3607294
25	19.4	0.0	0.0	chr7	33062804	33062856	(126283117)	+	(CCCGC)n	Simple_repeat	1	53	(0)	3607295
489	29.1	7.9	3.6	chr7	33841591	33841843	(125504130)	+	L2c	LINE/L2	3123	3387	(0)	3608474
214	33.8	5.0	0.8	chr7	33841928	33842061	(125503912)	C	L2c	LINE/L2	(38)	3349	3210	3608475
279	29.2	5.4	1.9	chr7	33854145	33854252	(125491721)	C	L2a	LINE/L2	(8)	3367	3256	3608491
232	29.4	5.6	3.8	chr7	33854558	33854663	(125491310)	+	Charlie18a	DNA/hAT-Charlie	5	112	(230)	3608494
249	30.3	5.3	1.1	chr7	33979995	33980084	(125365889)	C	L3b	LINE/CR1	(83)	5149	5056	3608675
180	33.9	8.0	1.7	chr7	34155168	34155284	(125190689)	+	MIR3	SINE/MIR	60	184	(24)	3608906
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
1951	18.2	1.9	3.8	chr7	36037643	36037810	(123308163)	+	MER47A	DNA/TcMar-Tigger	3	163	(203)	3611630
15	6.4	9.1	0.0	chr7	36048578	36048610	(123297363)	+	G-rich	Low_complexity	1	36	(0)	3611649
204	35.5	1.1	4.3	chr7	38729244	38729337	(120616636)	C	L2c	LINE/L2	(0)	3387	3297	3615568
17	0.0	4.8	0.0	chr7	38729408	38729428	(120616545)	+	(TG)n	Simple_repeat	1	22	(0)	3615569
244	30.8	11.0	0.0	chr7	38729639	38729768	(120616205)	C	L1M6	LINE/L1	(6098)	398	253	3615570
2009	16.7	3.3	1.8	chr7	39613847	39614237	(119731736)	C	MLT2C1	LTR/ERVL	(0)	397	1	3616811
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
320	32.3	6.1	0.0	chr7	40221875	40221998	(119123975)	+	LTR78	LTR/ERV1	292	423	(881)	3618043
683	29.8	1.2	8.4	chr7	40222097	40222441	(119123532)	+	LTR78	LTR/ERV1	610	929	(375)	3618043
2859	30.1	8.4	9.7	chr7	40436509	40438192	(118907781)	C	MamGypsy2-I	LTR/Gypsy	(660)	3506	1848	3618451
200	30.0	7.7	0.0	chr7	40469952	40470011	(118875962)	C	MIR3	SINE/MIR	(24)	184	120	3618513
2317	24.3	13.8	3.6	chr7	40517855	40518994	(118826979)	+	L1MC4a	LINE/L1	5855	7141	(901)	3618581
1952	21.5	8.4	0.8	chr7	40518993	40519489	(118826484)	+	L1MC4a	LINE/L1	7449	7986	(9)	3618581
13	14.6	7.9	0.0	chr7	40527771	40527808	(118818165)	+	A-rich	Low_complexity	1	41	(0)	3618593
1642	13.9	10.9	0.0	chr7	40535446	40535732	(118810241)	+	L1PA16	LINE/L1	5542	5863	(303)	3618604
795	11.5	0.0	1.9	chr7	40535733	40535836	(118810137)	C	AluSx	SINE/Alu	(210)	102	1	3618605
1717	11.3	0.8	0.8	chr7	40535837	40536220	(118809753)	C	L1PA16	LINE/L1	(679)	5487	5103	3618604
367	32.9	6.3	5.7	chr7	40721529	40721686	(118624287)	+	LFSINE_Vert	SINE/tRNA	52	210	(249)	3618884
313	23.8	9.3	4.5	chr7	40733406	40733537	(118612436)	+	UCON105	Unknown	53	191	(82)	3618904
408	35.3	0.7	1.3	chr7	40749933	40750087	(118595886)	C	MamRep605	LTR?	(115)	734	581	3618927
345	36.3	12.3	3.1	chr7	41188455	41188747	(118157226)	+	L2b	LINE/L2	3052	3375	(0)	3619479
13	17.7	9.8	0.0	chr7	41880065	41880115	(117465858)	+	(AATGAAG)n	Simple_repeat	1	56	(0)	3620471
204	35.4	3.4	3.4	chr7	41916647	41916763	(117429210)	C	OldhAT1	DNA/hAT-Ac	(1760)	1088	972	3620530
591	29.9	4.3	2.2	chr7	41916888	41917129	(117428844)	+	MIRb	SINE/MIR	8	261	(1)	3620531
42	0.0	0.0	0.0	chr7	41990866	41990901	(117355072)	+	(GT)n	Simple_repeat	1	36	(0)	3620632
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
219	40.5	3.5	1.4	chr7	42973188	42973325	(116372648)	+	MamRTE1	LINE/RTE-BovB	102	242	(3570)	3621922
281	29.6	5.8	0.0	chr7	42973381	42973461	(116372512)	+	MIRb	SINE/MIR	23	108	(160)	3621923
211	24.1	3.6	1.8	chr7	42973460	42973514	(116372459)	C	L2c	LINE/L2	(2)	3385	3330	3621924
1784	27.4	16.6	0.8	chr7	43277539	43279031	(116066942)	+	L2a	LINE/L2	1654	3426	(0)	3622395
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
444	27.6	4.5	13.0	chr7	43646302	43646571	(115699402)	C	MIR	SINE/MIR	(4)	258	13	3622924
867	22.8	0.0	0.0	chr7	43664610	43664758	(115681215)	+	AluJo	SINE/Alu	146	294	(18)	3622962
398	31.8	10.8	3.5	chr7	43785394	43785677	(115560296)	+	LTR33B	LTR/ERVL	9	315	(188)	3623172
3030	19.2	5.0	2.3	chr7	43785735	43786754	(115559219)	+	L1MEc	LINE/L1	1985	3034	(3285)	3623173
246	26.0	13.3	0.0	chr7	44067579	44067682	(115278291)	C	L2a	LINE/L2	(1)	3425	3306	3623753
325	15.5	8.7	0.0	chr7	44067733	44067816	(115278157)	+	L1ME1	LINE/L1	30	121	(6426)	3623754
191	33.9	2.8	0.8	chr7	44088342	44088467	(115257506)	C	L3b	LINE/CR1	(701)	3398	3292	3623789
89	32.8	0.3	0.3	chr7	44184888	44185190	(115160783)	+	GA-rich	Low_complexity	1	304	(0)	3623929
12	27.3	2.2	0.0	chr7	44582356	44582400	(114763573)	+	(CCGCCCC)n	Simple_repeat	1	46	(0)	3624448
2273	10.3	0.0	1.0	chr7	44733680	44733813	(114612160)	C	AluSx	SINE/Alu	(177)	135	2	3624750
1954	13.1	0.3	5.9	chr7	44733814	44733949	(114612024)	C	AluSz6	SINE/Alu	(176)	136	1	3624749
1470	12.7	3.5	11.8	chr7	44733950	44734045	(114611928)	+	L1MA7	LINE/L1	6193	6290	(1)	3624748
435	15.6	0.0	1.1	chr7	44734043	44734133	(114611840)	+	L1M3	LINE/L1	4645	4734	(1412)	3624745
769	15.6	0.0	1.6	chr7	44735349	44735476	(114610497)	+	FLAM_A	SINE/Alu	1	126	(16)	3624757
4018	15.7	8.3	3.1	chr7	44735477	44736261	(114609712)	+	L1MB8	LINE/L1	5310	6135	(43)	3624755
50	22.4	4.0	6.6	chr7	44885267	44885513	(114460460)	+	(CGC)n	Simple_repeat	1	257	(0)	3625085
2025	9.7	0.0	1.9	chr7	46145759	46146026	(113199947)	+	AluSg4	SINE/Alu	34	296	(14)	3626851
236	30.6	0.5	1.9	chr7	46258215	46258301	(113087672)	+	L2a	LINE/L2	3286	3422	(4)	3626986
3342	15.3	1.6	2.0	chr7	46370250	46370918	(112975055)	C	L1MB7	LINE/L1	(340)	5844	5175	3627150
2344	7.9	0.3	0.7	chr7	46752167	46752458	(112593515)	C	AluSc	SINE/Alu	(17)	292	2	3627621
15	13.7	0.0	0.0	chr7	46753019	46753042	(112592931)	+	(A)n	Simple_repeat	1	24	(0)	3627623
273	25.1	10.6	2.3	chr7	46753205	46753349	(112592624)	C	MIRb	SINE/MIR	(9)	253	106	3627624
37	25.8	3.6	2.1	chr7	46763969	46764099	(112581874)	+	(TCT)n	Simple_repeat	1	134	(0)	3627644
29	5.9	0.0	0.0	chr7	46764100	46764135	(112581838)	+	(CTC)n	Simple_repeat	1	36	(0)	3627645
2067	20.2	5.0	2.1	chr7	46764192	46764713	(112581260)	+	MER89	LTR/ERV1	14	551	(8)	3627646
360	27.7	6.3	5.1	chr7	46933191	46933346	(112412627)	+	MIRc	SINE/MIR	6	163	(105)	3627861
33	2.6	0.0	0.0	chr7	47640919	47640932	(111705041)	+	(GT)n	Simple_repeat	1	14	(0)	3628813
43	0.0	0.0	0.0	chr7	47640933	47640969	(111705004)	+	(GA)n	Simple_repeat	1	37	(0)	3628814
33	2.6	0.0	0.0	chr7	47640970	47640995	(111704978)	+	(GT)n	Simple_repeat	1	26	(0)	3628815
339	21.6	5.2	2.4	chr7	48085219	48085323	(111260650)	C	MER112	DNA/hAT-Charlie	(2648)	109	1	3629465
1166	34.0	8.5	4.1	chr7	54996006	54996961	(104349012)	+	L2	LINE/L2	1936	2937	(482)	3638072
328	19.7	1.4	4.0	chr7	55065367	55065440	(104280533)	C	MER135	DNA	(141)	87	16	3638161
16	0.0	0.0	0.0	chr7	55065831	55065848	(104280125)	+	(T)n	Simple_repeat	1	18	(0)	3638162
239	18.3	11.6	11.9	chr7	55134130	55134389	(104211584)	+	L1M3e	LINE/L1	1353	1611	(5419)	3638232
596	26.6	6.6	2.0	chr7	55308608	55308853	(104037120)	+	MER102b	DNA/hAT-Charlie	84	341	(0)	3638436
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
2357	8.9	0.3	0.6	chr7	55570661	55570973	(103775000)	+	AluSx1	SINE/Alu	1	312	(0)	3638827
2104	10.4	0.7	4.5	chr7	56046510	56046817	(103299156)	+	AluSq	SINE/Alu	7	302	(11)	3639810
856	22.9	2.4	2.4	chr7	56046845	56047054	(103298919)	C	LTR40c	LTR/ERVL	(247)	218	9	3639806
1749	22.9	6.6	6.1	chr7	56047059	56047101	(103298872)	+	L1MC4	LINE/L1	7160	7219	(823)	3639804
1844	16.0	1.7	3.3	chr7	56047102	56047408	(103298565)	+	AluJo	SINE/Alu	1	302	(10)	3639811
2332	9.0	0.3	1.6	chr7	56047997	56048306	(103297667)	+	AluSq	SINE/Alu	1	306	(7)	3639814
1749	23.4	6.7	6.0	chr7	56048307	56048631	(103297342)	+	L1MC4	LINE/L1	7475	7833	(49)	3639804
977	14.8	2.0	0.7	chr7	56048647	56048795	(103297178)	C	AluSz6	SINE/Alu	(25)	287	137	3639815
14	20.4	1.7	6.8	chr7	64307702	64307759	(95038214)	+	(CCCT)n	Simple_repeat	1	59	(0)	3646131
2448	7.4	0.0	1.0	chr7	66047102	66047410	(93298563)	+	AluSc	SINE/Alu	1	306	(3)	3649083
16	0.0	4.0	0.0	chr7	66047411	66047428	(93298545)	+	(AAC)n	Simple_repeat	2	19	(0)	3649084
345	31.8	8.2	1.9	chr7	66047540	66047704	(93298269)	C	L2c	LINE/L2	(2)	3385	3190	3649085
340	31.6	7.0	1.5	chr7	66111031	66111165	(93234808)	+	L2c	LINE/L2	3243	3385	(2)	3649263
1727	17.7	4.3	0.0	chr7	66111275	66111562	(93234411)	C	AluSz	SINE/Alu	(10)	302	2	3649264
10967	15.7	7.7	4.1	chr7	67128989	67129689	(92216284)	C	L1MC1	LINE/L1	(5824)	684	3	3651558
677	29.4	12.1	7.1	chr7	68691135	68691573	(90654400)	C	LTR33A	LTR/ERVL	(56)	464	1	3654990
616	30.3	10.4	2.1	chr7	68691833	68692263	(90653710)	C	MamRep605	LTR?	(323)	526	56	3654995
3302	8.3	0.2	2.2	chr7	68698769	68699221	(90646752)	+	MLT2A1	LTR/ERVL	1	444	(0)	3655011
400	27.9	1.8	4.3	chr7	68699222	68699323	(90646650)	+	MER81	DNA/hAT-Blackjack	14	113	(1)	3655010
912	18.4	0.5	2.1	chr7	68699387	68699575	(90646398)	C	MER5A	DNA/hAT-Charlie	(3)	186	1	3655012
733	19.6	0.0	1.4	chr7	68706322	68706466	(90639507)	C	MamRep605	LTR?	(704)	145	3	3655032
1983	15.2	1.0	0.0	chr7	68706632	68706928	(90639045)	+	AluJo	SINE/Alu	1	300	(12)	3655033
242	33.3	12.6	1.7	chr7	69703077	69703139	(89642834)	C	L2c	LINE/L2	(138)	3249	3183	3657235
409	25.1	12.1	4.5	chr7	69837287	69837454	(89508519)	C	MIRb	SINE/MIR	(67)	201	15	3657447
1866	21.2	6.4	4.3	chr7	69871371	69871906	(89474067)	C	MER44B	DNA/TcMar-Tigger	(2)	548	1	3657497
248	31.0	5.3	0.0	chr7	70052551	70052621	(89293352)	+	MER91A	DNA/hAT-Tip100	121	195	(1)	3657776
11	14.1	10.3	0.0	chr7	70575892	70575930	(88770043)	+	(TTGATAT)n	Simple_repeat	1	43	(0)	3658503
10929	15.4	7.6	4.3	chr7	72682587	72683287	(86662686)	+	L1MC1	LINE/L1	3	684	(5824)	3662865
12	25.5	0.0	0.0	chr7	73308615	73308651	(86037322)	+	(CCACC)n	Simple_repeat	1	37	(0)	3664324
306	24.6	19.8	0.8	chr7	73308961	73309091	(86036882)	C	L1M5	LINE/L1	(601)	5523	5362	3664325
19	9.2	2.9	0.0	chr7	73521779	73521813	(85824160)	+	(CCCGG)n	Simple_repeat	1	36	(0)	3664803
16	22.6	3.3	3.2	chr7	73521924	73521983	(85823990)	+	(GCG)n	Simple_repeat	1	62	(0)	3664804
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
2058	16.2	0.0	0.7	chr7	73851192	73851499	(85494474)	C	AluJr	SINE/Alu	(4)	308	3	3665631
645	22.3	7.4	2.2	chr7	73851577	73851805	(85494168)	C	L1M5	LINE/L1	(705)	5537	5296	3665632
902	19.3	0.6	1.2	chr7	73851818	73851990	(85493983)	C	L1MA8	LINE/L1	(5)	6286	6115	3665633
114	20.4	1.1	3.5	chr7	73851991	73852275	(85493698)	+	(CTTC)n	Simple_repeat	1	288	(0)	3665634
7164	15.7	4.4	2.7	chr7	73941549	73941923	(85404050)	C	L1M4	LINE/L1	(6331)	1186	806	3665838
2087	21.2	9.4	3.9	chr7	73941921	73942518	(85403455)	C	L1M4	LINE/L1	(6849)	668	34	3665838
566	26.6	7.5	4.0	chr7	74097731	74098330	(85247643)	C	MER21C	LTR/ERVL	(131)	807	36	3666172
1097	18.8	0.5	0.0	chr7	74279824	74280025	(85065948)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	3666661
248	27.4	10.6	0.7	chr7	75732765	75732900	(83613073)	C	MER5A1	DNA/hAT-Charlie	(0)	166	16	3670372
248	28.7	10.0	1.8	chr7	75732941	75733050	(83612923)	+	L2c	LINE/L2	3267	3386	(1)	3670373
639	25.8	12.9	0.9	chr7	75733160	75733370	(83612603)	+	MIRc	SINE/MIR	2	241	(27)	3670374
363	25.0	4.4	0.0	chr7	76067841	76067948	(83278025)	C	MLT1H	LTR/ERVL-MaLR	(312)	237	125	3671246
1870	8.4	3.4	8.7	chr7	76068073	76068261	(83277712)	C	AluJr	SINE/Alu	(20)	292	107	3671247
13	7.1	0.0	10.8	chr7	76235025	76235061	(83110912)	+	G-rich	Low_complexity	1	37	(0)	3671661
13	28.4	0.9	8.5	chr7	76235311	76235415	(83110558)	+	G-rich	Low_complexity	1	106	(0)	3671662
2211	10.7	1.0	0.3	chr7	76305352	76305650	(83040323)	+	AluSq2	SINE/Alu	1	301	(12)	3671831
13	17.6	0.0	2.9	chr7	76358681	76358714	(82987259)	+	GA-rich	Low_complexity	1	34	(0)	3671938
23	27.0	3.6	0.0	chr7	76358916	76359003	(82986970)	+	(GCGGCT)n	Simple_repeat	1	91	(0)	3671939
34	0.0	0.0	0.0	chr7	77537204	77537234	(81808739)	+	(GGC)n	Simple_repeat	1	31	(0)	3673972
12	13.7	0.0	0.0	chr7	77537368	77537391	(81808582)	+	(GCC)n	Simple_repeat	1	24	(0)	3673973
692	21.0	2.2	4.9	chr7	77803051	77803235	(81542738)	+	CR1_Mam	LINE/CR1	26	205	(1999)	3674519
1190	29.0	18.3	3.3	chr7	78326651	78327468	(81018505)	C	LTR78B	LTR/ERV1	(35)	1261	314	3675296
212	29.2	0.0	0.0	chr7	78635480	78635527	(80710446)	+	L2a	LINE/L2	3374	3421	(5)	3675723
332	34.4	10.1	3.2	chr7	78702797	78703144	(80642829)	C	L2	LINE/L2	(947)	2472	2098	3675816
865	28.4	8.1	10.4	chr7	79096065	79096571	(80249402)	+	LTR33	LTR/ERVL	22	515	(0)	3676305
309	34.2	11.8	5.1	chr7	79611037	79611233	(79734740)	C	MamRTE1	LINE/RTE-BovB	(3010)	802	591	3677025
432	24.0	4.4	10.1	chr7	80274831	80275042	(79070931)	C	L1MEj	LINE/L1	(47)	2113	1921	3677953
844	15.1	0.0	0.0	chr7	80275043	80275161	(79070812)	C	FLAM_C	SINE/Alu	(24)	119	1	3677954
432	24.0	4.4	10.1	chr7	80275162	80275286	(79070687)	C	L1MEj	LINE/L1	(240)	1920	1796	3677953
15	5.5	0.0	0.0	chr7	80445750	80445768	(78900205)	+	(A)n	Simple_repeat	1	19	(0)	3678208
13	23.8	0.0	2.4	chr7	80542621	80542662	(78803311)	+	(TTGCCTA)n	Simple_repeat	1	42	(0)	3678342
2275	21.5	6.2	3.4	chr7	80611516	80612107	(78733866)	C	MER90a	LTR/ERV1	(0)	614	5	3678428
242	32.1	4.4	3.5	chr7	80917363	80917475	(78428498)	C	LFSINE_Vert	SINE/tRNA	(296)	163	50	3678793
523	19.1	0.0	0.0	chr7	81161581	81161669	(78184304)	+	MER58B	DNA/hAT-Charlie	250	338	(3)	3679184
3932	14.7	1.1	5.5	chr7	81161670	81162409	(78183564)	+	LTR62	LTR/ERVL	3	709	(0)	3679185
5335	14.7	1.9	0.4	chr7	81284826	81286028	(78059945)	+	L1PA16	LINE/L1	4938	6155	(11)	3679336
12	20.3	6.7	0.0	chr7	81515203	81515247	(77830726)	+	(TGTAGT)n	Simple_repeat	1	48	(0)	3679624
982	31.9	6.2	4.6	chr7	81724971	81725734	(77620239)	+	L2a	LINE/L2	2648	3425	(1)	3679911
754	27.7	6.6	7.3	chr7	82050233	82050645	(77295328)	C	LTR40A1	LTR/ERVL	(2)	582	173	3680334
752	32.5	8.2	3.0	chr7	82542573	82542998	(76802975)	+	L2	LINE/L2	1675	2124	(1295)	3681072
425	28.8	8.4	2.5	chr7	84237516	84237672	(75108301)	C	MIR	SINE/MIR	(16)	246	80	3683298
33	5.6	0.0	0.0	chr7	84412924	84412960	(74933013)	+	(AC)n	Simple_repeat	1	37	(0)	3683512
193	34.9	11.4	1.5	chr7	84638020	84638153	(74707820)	C	L3	LINE/CR1	(1053)	3046	2898	3683786
275	25.4	0.0	0.0	chr7	84638156	84638214	(74707759)	C	CR1-3_Croc	LINE/CR1	(1719)	1886	1828	3683787
272	36.2	9.7	0.6	chr7	84638288	84638465	(74707508)	C	L3	LINE/CR1	(1352)	2747	2552	3683786
902	14.1	0.7	0.0	chr7	84729285	84729426	(74616547)	+	MER65D	LTR/ERV1	5	147	(326)	3683902
1518	16.2	5.4	0.0	chr7	84729516	84729780	(74616193)	+	MER65D	LTR/ERV1	157	436	(37)	3683902
13	15.4	2.5	4.9	chr7	87152981	87153020	(72192953)	+	(TTTTTAG)n	Simple_repeat	1	41	(0)	3686860
30	0.0	0.0	0.0	chr7	87702265	87702293	(71643680)	+	(TTTTA)n	Simple_repeat	1	29	(0)	3687562
1709	17.9	0.4	0.7	chr7	87702297	87702575	(71643398)	C	AluJr	SINE/Alu	(30)	282	5	3687563
5853	18.3	6.8	3.1	chr7	87702576	87702699	(71643274)	+	Charlie1a	DNA/hAT-Charlie	1290	1421	(34)	3687560
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
300	31.9	1.6	4.0	chr7	90816811	90816934	(68529039)	C	MIR3	SINE/MIR	(1)	207	87	3691656
740	29.9	18.3	1.6	chr7	90834590	90835447	(68510526)	C	L2	LINE/L2	(710)	2709	1677	3691676
15	13.6	0.0	5.6	chr7	91264241	91264276	(68081697)	+	(TCC)n	Simple_repeat	1	36	(0)	3692226
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
537	30.1	8.1	3.1	chr7	92740946	92741298	(66604675)	+	L1ME3G	LINE/L1	354	729	(195)	3694362
201	22.1	1.3	12.5	chr7	92904451	92904538	(66441435)	+	AmnSINE1	SINE/5S-Deu-L2	110	187	(388)	3694546
1339	22.1	10.9	1.9	chr7	94064966	94065390	(65280583)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	35	3696109
253	27.1	11.3	2.5	chr7	94183312	94183432	(65162541)	C	MIR1_Amn	SINE/MIR	(96)	134	2	3696266
665	19.7	0.0	0.0	chr7	94190567	94190683	(65155290)	C	LTR67B	LTR/ERVL	(65)	555	439	3696270
28	0.0	0.0	0.0	chr7	94297574	94297600	(65048373)	+	(T)n	Simple_repeat	1	27	(0)	3696417
1829	16.3	1.0	1.9	chr7	95500284	95500596	(63845377)	+	AluJr	SINE/Alu	1	310	(2)	3698067
188	37.0	5.4	6.2	chr7	96236334	96236575	(63109398)	C	L2c	LINE/L2	(52)	3335	3096	3699057
1275	10.7	0.6	1.1	chr7	98854025	98854201	(60491772)	C	AluSx	SINE/Alu	(0)	312	137	3703572
202	31.1	10.3	1.6	chr7	98854203	98854326	(60491647)	C	L2c	LINE/L2	(228)	3159	3024	3703573
202	28.3	13.6	3.8	chr7	99393722	99393853	(59952120)	+	L2c	LINE/L2	2920	3066	(321)	3704646
660	31.1	2.2	1.4	chr7	99407872	99408093	(59937880)	C	MIR	SINE/MIR	(0)	262	39	3704670
21	9.8	0.0	0.0	chr7	99408550	99408582	(59937391)	+	(GCG)n	Simple_repeat	1	33	(0)	3704671
1646	7.6	1.1	14.5	chr7	99438153	99438455	(59907518)	+	AluJr	SINE/Alu	12	273	(39)	3704734
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
2035	5.2	1.5	3.4	chr7	99471610	99471877	(59874096)	+	AluSx1	SINE/Alu	39	301	(11)	3704801
2275	6.7	1.0	2.3	chr7	99471961	99472126	(59873847)	C	AluSc	SINE/Alu	(13)	296	132	3704802
1253	13.9	2.5	0.5	chr7	99500501	99500694	(59845279)	C	AluSx3	SINE/Alu	(31)	280	83	3704872
994	34.9	14.6	1.3	chr7	100035148	100035840	(59310133)	+	MamRTE1	LINE/RTE-BovB	1920	2720	(1092)	3705729
2311	15.4	3.4	2.6	chr7	100086944	100087404	(59258569)	C	MER4CL34	LTR/ERV1	(203)	562	39	3705836
974	15.7	0.0	2.0	chr7	100087409	100087561	(59258412)	C	AluJb	SINE/Alu	(162)	150	1	3705839
2506	5.1	0.7	0.0	chr7	100436848	100437140	(58908833)	C	AluSg	SINE/Alu	(15)	295	1	3706571
246	17.1	0.0	0.0	chr7	100538654	100538694	(58807279)	+	tRNA-Thr-ACA	tRNA	2	42	(34)	3706843
355	34.5	10.1	0.0	chr7	101093924	101094146	(58251827)	+	L1ME4c	LINE/L1	289	536	(294)	3707977
1837	16.5	0.0	4.3	chr7	101117759	101117869	(58228104)	+	AluJb	SINE/Alu	2	110	(202)	3708030
12	17.4	6.1	3.9	chr7	101118402	101118450	(58227523)	+	(AGAGAATG)n	Simple_repeat	1	52	(0)	3708032
2129	14.8	0.0	2.5	chr7	101118685	101119001	(58226972)	C	AluJr	SINE/Alu	(3)	309	1	3708033
24	17.9	0.0	0.0	chr7	101122180	101122223	(58223750)	+	GA-rich	Low_complexity	1	44	(0)	3708043
19	23.7	1.6	3.1	chr7	101122295	101122398	(58223575)	+	A-rich	Low_complexity	1	102	(0)	3708044
26	8.1	0.0	4.7	chr7	101126906	101126948	(58219025)	+	(AC)n	Simple_repeat	1	43	(0)	3708051
2312	8.1	0.7	2.6	chr7	101132438	101132746	(58213227)	+	AluSq	SINE/Alu	3	305	(8)	3708064
13	7.2	3.1	3.0	chr7	101132747	101132764	(58213209)	+	(GAGGAT)n	Simple_repeat	2	19	(0)	3708065
1455	13.1	4.6	9.7	chr7	101132822	101133011	(58212962)	+	AluJr	SINE/Alu	1	177	(135)	3708066
2167	9.9	0.3	0.0	chr7	101133012	101133293	(58212680)	+	AluSx1	SINE/Alu	1	283	(29)	3708067
725	7.1	4.0	1.0	chr7	101138804	101138901	(58207072)	+	AluJo	SINE/Alu	24	124	(188)	3708076
14	21.5	4.0	1.9	chr7	101139194	101139243	(58206730)	+	(ATAA)n	Simple_repeat	1	52	(0)	3708079
2340	10.2	0.0	0.6	chr7	101139319	101139631	(58206342)	+	AluSx1	SINE/Alu	1	311	(1)	3708080
17	34.2	3.2	2.4	chr7	101162865	101162941	(58183032)	+	G-rich	Low_complexity	1	113	(14)	3708136
18	18.1	2.6	0.0	chr7	101162942	101162979	(58182994)	+	(GC)n	Simple_repeat	1	39	(0)	3708137
18	19.5	0.0	5.7	chr7	101163032	101163084	(58182889)	+	(CTC)n	Simple_repeat	1	53	(0)	3708138
190	33.3	0.0	0.0	chr7	101217552	101217611	(58128362)	C	MIR3	SINE/MIR	(49)	159	100	3708258
218	25.0	14.0	4.8	chr7	101252159	101252242	(58093731)	+	L2c	LINE/L2	3294	3386	(1)	3708330
830	9.3	4.8	0.0	chr7	101252592	101252709	(58093264)	+	L1PREC2	LINE/L1	6037	6160	(0)	3708331
2273	8.7	1.0	1.9	chr7	101252719	101253030	(58092943)	+	AluSx3	SINE/Alu	1	309	(2)	3708332
228	30.5	10.9	3.5	chr7	102835236	102835405	(56510568)	+	L3	LINE/CR1	3904	4087	(12)	3711811
313	32.4	7.8	4.1	chr7	102860329	102860524	(56485449)	C	L2c	LINE/L2	(223)	3164	2961	3711846
19	0.0	4.2	0.0	chr7	102860680	102860703	(56485270)	+	(TG)n	Simple_repeat	1	25	(0)	3711847
328	25.6	2.0	2.3	chr7	102860771	102860923	(56485050)	C	L1MC4	LINE/L1	(4)	8038	7899	3711848
1172	29.3	4.3	1.9	chr7	102875604	102876014	(56469959)	C	LTR33A_	LTR/ERVL	(0)	531	111	3711872
16	13.2	3.0	0.0	chr7	105776421	105776453	(53569520)	+	(CCTT)n	Simple_repeat	1	34	(0)	3716564
690	30.1	9.6	0.0	chr7	105783003	105783228	(53562745)	C	MIRb	SINE/MIR	(16)	252	3	3716574
2419	22.0	6.3	6.1	chr7	105783239	105783957	(53562016)	+	MER21C	LTR/ERVL	1	790	(148)	3716575
795	25.4	0.6	0.0	chr7	105932947	105933127	(53412846)	C	MER121	DNA/hAT?	(215)	186	5	3716826
417	29.2	9.9	2.5	chr7	106216380	106216804	(53129169)	C	MLT1J	LTR/ERVL-MaLR	(35)	477	1	3717296
7380	21.9	5.0	4.1	chr7	106346363	106347493	(52998480)	+	Charlie6	DNA/hAT-Charlie	871	2005	(1495)	3717452
553	15.7	4.2	0.0	chr7	106598920	106599041	(52746932)	C	MLT1J	LTR/ERVL-MaLR	(407)	155	20	3717814
185	27.9	2.3	8.5	chr7	106718719	106718812	(52627161)	C	L3	LINE/CR1	(2668)	1431	1344	3717958
634	25.7	5.1	4.3	chr7	107035262	107035493	(52310480)	C	HAL1	LINE/L1	(478)	2029	1796	3718493
796	23.1	10.3	0.0	chr7	107035494	107035701	(52310272)	C	L2	LINE/L2	(1086)	2333	2102	3718489
562	15.8	14.9	8.1	chr7	107035702	107035887	(52310086)	C	MLT1E1A	LTR/ERVL-MaLR	(337)	343	143	3718496
202	29.3	8.5	1.3	chr7	107564931	107565006	(51780967)	C	MIR	SINE/MIR	(25)	237	156	3719259
214	28.8	8.8	3.1	chr7	107565181	107565309	(51780664)	C	L2c	LINE/L2	(0)	3387	3251	3719260
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
629	32.6	5.6	7.4	chr7	107595046	107595412	(51750561)	+	L2b	LINE/L2	3014	3373	(2)	3719309
607	29.8	5.1	4.3	chr7	107614305	107614539	(51731434)	+	MIRb	SINE/MIR	31	267	(1)	3719336
1061	18.8	11.2	7.5	chr7	107934785	107935066	(51410907)	+	AluJo	SINE/Alu	2	295	(17)	3719843
28	5.8	0.0	0.0	chr7	107935338	107935373	(51410600)	+	(T)n	Simple_repeat	1	36	(0)	3719844
2294	10.6	0.0	0.7	chr7	107953075	107953375	(51392598)	+	AluSx1	SINE/Alu	1	299	(13)	3719868
2324	12.7	0.3	0.7	chr7	108022805	108023112	(51322861)	C	AluSx	SINE/Alu	(4)	308	2	3719982
215	32.5	12.2	6.8	chr7	108023113	108023152	(51322821)	C	L3b	LINE/CR1	(242)	4990	4951	3719981
361	30.1	10.4	1.2	chr7	111198293	111198480	(48147493)	+	MIRb	SINE/MIR	5	222	(46)	3724004
235	38.4	6.8	6.8	chr7	111198556	111198851	(48147122)	+	L2b	LINE/L2	2973	3268	(107)	3724005
2163	25.3	8.4	4.7	chr7	111392523	111393282	(47952691)	C	MER21C	LTR/ERVL	(33)	905	21	3724267
371	22.4	9.3	7.0	chr7	112160197	112160311	(47185662)	+	MIRc	SINE/MIR	115	232	(36)	3725378
41	0.0	0.0	0.0	chr7	112435622	112435656	(46910317)	+	(GT)n	Simple_repeat	1	35	(0)	3725800
618	32.5	6.0	4.0	chr7	112593463	112594520	(46751453)	C	L1M5	LINE/L1	(2188)	3958	2876	3726043
1625	31.2	8.2	8.3	chr7	114825272	114825325	(44520648)	+	L1MEi	LINE/L1	39	96	(2116)	3728898
2274	10.3	5.5	1.1	chr7	114825326	114825689	(44520284)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3728899
1625	31.2	8.2	8.3	chr7	114825690	114826352	(44519621)	+	L1MEi	LINE/L1	97	704	(1508)	3728898
403	32.8	9.3	4.8	chr7	114885744	114886079	(44459894)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	243	3728975
219	41.3	4.7	0.0	chr7	114889633	114889753	(44456220)	C	L2	LINE/L2	(634)	2785	2659	3728983
25	6.6	0.0	0.0	chr7	116228000	116228031	(43117942)	+	(T)n	Simple_repeat	1	32	(0)	3730759
437	27.8	0.9	1.9	chr7	116443417	116443684	(42902289)	+	MIR	SINE/MIR	57	259	(3)	3731051
13	21.9	2.3	2.2	chr7	116524797	116524840	(42821133)	+	(CTCGCTG)n	Simple_repeat	1	45	(0)	3731164
1224	24.3	12.5	5.3	chr7	116568992	116569825	(42776148)	C	L1MEh	LINE/L1	(573)	1662	760	3731237
241	35.0	2.8	0.0	chr7	116569827	116569929	(42776044)	+	L2c	LINE/L2	2205	2310	(1109)	3731227
771	33.4	5.5	4.7	chr7	116569942	116570788	(42775185)	+	L2c	LINE/L2	2454	3309	(78)	3731227
16	10.0	0.0	0.0	chr7	116571235	116571256	(42774717)	+	(A)n	Simple_repeat	1	22	(0)	3731238
278	27.4	5.9	1.8	chr7	116577007	116577148	(42768825)	+	MamGypLTR1b	LTR/Gypsy	650	779	(3)	3731250
573	29.6	2.2	0.0	chr7	116577367	116577542	(42768431)	C	LTR82B	LTR/ERVL	(6)	824	645	3731251
242	28.1	4.7	3.5	chr7	116776835	116776919	(42569054)	C	LFSINE_Vert	SINE/tRNA	(350)	109	24	3731521
25	25.4	5.7	0.9	chr7	116953370	116953474	(42392499)	+	(CGGCCG)n	Simple_repeat	1	111	(0)	3731852
651	32.2	6.9	6.7	chr7	117098228	117098638	(42247335)	+	L2c	LINE/L2	2963	3386	(1)	3732090
315	22.8	7.0	2.7	chr7	117124453	117124601	(42221372)	C	Tigger12	DNA/TcMar-Tigger	(113)	2362	2207	3732129
607	25.4	9.4	0.6	chr7	117124621	117124794	(42221179)	+	MIR	SINE/MIR	2	192	(70)	3732130
596	26.2	7.1	1.1	chr7	117124859	117125043	(42220930)	C	Tigger12c	DNA/TcMar-Tigger	(495)	239	43	3732131
320	24.3	10.4	1.9	chr7	117132404	117132508	(42213465)	+	L3b	LINE/CR1	5014	5128	(104)	3732134
477	29.4	2.2	1.1	chr7	117132512	117132668	(42213305)	C	L3b	LINE/CR1	(2)	4097	3993	3732135
183	29.4	4.2	13.9	chr7	117132559	117132716	(42213257)	+	Penelope1_Vert	LINE/Penelope	762	903	(184)	3732136
2407	27.8	10.4	7.8	chr7	117132714	117133831	(42212142)	C	L3b	LINE/CR1	(830)	3269	2153	3732137
1050	28.7	8.1	1.8	chr7	117157478	117157914	(42188059)	C	L4_C_Mam	LINE/RTE-X	(1032)	4106	3640	3732170
24	14.2	0.0	0.0	chr7	117230763	117230801	(42115172)	+	(A)n	Simple_repeat	1	39	(0)	3732263
321	32.6	0.0	0.0	chr7	117269535	117269623	(42076350)	+	L2a	LINE/L2	3336	3424	(2)	3732314
304	28.1	0.0	0.0	chr7	117269695	117269776	(42076197)	+	MIR3	SINE/MIR	124	205	(3)	3732315
743	32.0	3.3	2.5	chr7	119664657	119665015	(39680958)	+	L1MEb	LINE/L1	237	598	(5472)	3735417
925	28.1	6.8	1.2	chr7	119665027	119665430	(39680543)	+	L1ME2z	LINE/L1	5738	6165	(279)	3735418
2074	26.6	2.6	1.9	chr7	121084191	121084808	(38261165)	C	MER20B	DNA/hAT-Charlie	(7)	776	155	3737213
238	27.4	4.6	0.0	chr7	121084947	121085008	(38260965)	C	MER20B	DNA/hAT-Charlie	(663)	120	56	3737213
12	13.9	0.0	0.0	chr7	121085260	121085283	(38260690)	+	(CTG)n	Simple_repeat	1	24	(0)	3737214
433	29.7	9.9	0.0	chr7	121485838	121486019	(37859954)	+	MLT1N2	LTR/ERVL-MaLR	355	556	(6)	3737752
1569	17.9	3.1	12.4	chr7	121486232	121486659	(37859314)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	1	3737753
727	33.5	3.2	1.2	chr7	121530297	121530695	(37815278)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	5	3737829
1152	19.1	0.9	0.9	chr7	121544457	121544688	(37801285)	+	LTR54	LTR/ERV1	277	508	(2)	3737851
512	30.4	0.0	2.0	chr7	121544691	121544838	(37801135)	+	MER92-int	LTR/ERV1	5067	5211	(7)	3737848
2526	20.9	1.2	7.3	chr7	121544848	121545170	(37800803)	+	MER92C	LTR/ERV1	1	301	(289)	3737848
289	32.2	6.8	1.9	chr7	123538110	123538264	(35807709)	+	MLT1I	LTR/ERVL-MaLR	175	337	(74)	3740560
54	0.0	0.0	0.0	chr7	127707767	127707812	(31638161)	+	(GT)n	Simple_repeat	1	46	(0)	3746139
1785	12.6	0.4	2.2	chr7	128216730	128217007	(31128966)	+	AluJr	SINE/Alu	21	293	(19)	3746815
419	10.0	1.6	0.0	chr7	128344082	128344141	(31001832)	+	U7	snRNA	2	62	(1)	3747039
12	23.2	0.0	4.5	chr7	128531223	128531266	(30814707)	+	(CCCCACT)n	Simple_repeat	1	44	(0)	3747466
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
383	32.3	3.6	0.9	chr7	129845720	129845875	(29500098)	+	MIR3	SINE/MIR	16	181	(87)	3749955
1391	16.9	6.8	9.7	chr7	129846227	129846346	(29499627)	+	AluJo	SINE/Alu	2	121	(191)	3749956
350	22.2	4.6	13.2	chr7	129855551	129855716	(29490257)	C	L2a	LINE/L2	(0)	3426	3276	3749975
1660	17.6	0.4	2.1	chr7	129896416	129896704	(29449269)	C	AluJb	SINE/Alu	(28)	284	1	3750047
412	21.7	2.1	2.1	chr7	130838569	130838662	(28507311)	+	MER94	DNA/hAT-Blackjack	41	134	(0)	3751721
1995	19.4	3.8	14.3	chr7	130872324	130872950	(28473023)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	3751760
593	26.2	7.0	6.6	chr7	130873005	130873245	(28472728)	+	MIRb	SINE/MIR	26	267	(1)	3751761
362	34.1	0.8	0.0	chr7	130873271	130873402	(28472571)	+	MIRb	SINE/MIR	53	185	(83)	3751762
17	22.7	0.0	0.0	chr7	131164556	131164591	(28181382)	+	(T)n	Simple_repeat	1	36	(0)	3752270
426	34.0	5.9	8.6	chr7	131164858	131165172	(28180801)	C	L2b	LINE/L2	(4)	3371	3066	3752271
2134	22.2	7.4	0.8	chr7	131188269	131188771	(28157202)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	11	3752324
239	31.7	3.7	5.5	chr7	131188793	131188902	(28157071)	+	MamRTE1	LINE/RTE-BovB	3652	3759	(53)	3752325
195	23.1	15.0	6.1	chr7	131625831	131625945	(27720028)	C	MIR3	SINE/MIR	(64)	144	18	3753170
847	24.0	0.0	4.3	chr7	131896921	131897107	(27448866)	C	MER41C	LTR/ERV1	(25)	496	318	3753644
19	0.0	0.0	0.0	chr7	131897108	131897128	(27448845)	+	(T)n	Simple_repeat	1	21	(0)	3753645
180	18.9	1.9	14.5	chr7	132066030	132066091	(27279882)	C	Penelope1_Vert	LINE/Penelope	(247)	840	787	3753883
559	23.7	3.5	0.2	chr7	132739379	132739538	(26606435)	C	MIRc	SINE/MIR	(28)	180	9	3754866
1279	24.7	26.3	0.9	chr7	132742156	132742595	(26603378)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	3754871
344	31.6	11.0	6.0	chr7	133512446	133512645	(25833328)	C	L2c	LINE/L2	(195)	3192	2964	3756054
19	7.3	0.0	0.0	chr7	133512657	133512685	(25833288)	+	(AAACC)n	Simple_repeat	1	29	(0)	3756056
185	22.9	7.7	0.0	chr7	133512734	133512781	(25833192)	+	MIR	SINE/MIR	75	126	(136)	3756057
1800	13.0	9.7	0.0	chr7	133512851	133513111	(25832862)	+	AluSz6	SINE/Alu	1	289	(23)	3756058
12976	13.5	2.9	3.0	chr7	133702626	133704134	(25641839)	C	Tigger4	DNA/TcMar-Tigger	(560)	2171	686	3756341
1694	30.8	5.4	5.8	chr7	134613926	134614644	(24731329)	C	L3	LINE/CR1	(374)	3725	3014	3757747
261	31.6	7.6	0.8	chr7	134693683	134693816	(24652157)	+	LTR90B	LTR	653	796	(0)	3757866
435	23.7	4.1	2.5	chr7	134730518	134730638	(24615335)	+	UCON79	DNA?	13	135	(36)	3757941
359	22.5	1.8	5.9	chr7	134876070	134876187	(24469786)	C	Charlie4z	DNA/hAT-Charlie	(17)	150	38	3758167
229	23.1	10.9	5.8	chr7	134890636	134890773	(24455200)	C	AmnSINE1	SINE/5S-Deu-L2	(429)	146	1	3758186
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
2310	8.9	0.7	0.0	chr7	135663339	135663642	(23682331)	C	AluSz	SINE/Alu	(5)	307	2	3759375
887	25.2	4.5	3.2	chr7	135716663	135716879	(23629094)	+	MIRb	SINE/MIR	26	245	(23)	3759460
455	30.5	34.2	4.0	chr7	135716885	135717236	(23628737)	C	L3	LINE/CR1	(609)	3490	3019	3759458
1409	16.0	1.6	13.6	chr7	137508526	137508822	(21837151)	+	MER67D	LTR/ERV1	56	310	(204)	3762019
13	17.1	3.0	0.0	chr7	137508823	137508855	(21837118)	+	A-rich	Low_complexity	1	34	(0)	3762021
434	11.7	2.5	0.0	chr7	137509159	137509235	(21836738)	+	MER67D	LTR/ERV1	311	389	(125)	3762019
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
1308	14.2	0.0	2.9	chr7	138875814	138876017	(20469956)	C	AluJr	SINE/Alu	(30)	282	85	3764484
201	25.6	6.5	7.5	chr7	138876058	138876150	(20469823)	+	L2c	LINE/L2	3294	3385	(2)	3764485
630	2.8	0.0	0.0	chr7	139340700	139340771	(20005202)	+	tRNA-Arg-AGG	tRNA	1	72	(4)	3765383
229	37.5	4.8	0.6	chr7	139732291	139732451	(19613522)	C	MamRTE1	LINE/RTE-BovB	(2189)	1623	1456	3766099
351	21.7	0.0	11.5	chr7	139771539	139771642	(19574331)	C	L2c	LINE/L2	(8)	3379	3288	3766159
479	31.7	11.4	2.5	chr7	139771647	139772114	(19573859)	+	Plat_L3	LINE/CR1	3018	3574	(12)	3766160
418	27.0	9.7	1.5	chr7	139774702	139774900	(19571073)	+	MamRep434	DNA/TcMar-Tigger	16	232	(194)	3766163
14	20.9	4.8	4.6	chr7	140626604	140626665	(18719308)	+	(TCCT)n	Simple_repeat	1	65	(0)	3767905
425	34.4	7.0	5.8	chr7	142556455	142556889	(16789084)	C	L1MEg	LINE/L1	(5267)	817	377	3770741
17	21.6	5.6	0.0	chr7	143381260	143381313	(15964660)	+	(CTCC)n	Simple_repeat	1	57	(0)	3771838
238	18.6	17.6	1.4	chr7	143457209	143457279	(15888694)	C	L2c	LINE/L2	(2)	3385	3301	3771959
17	18.2	0.0	4.3	chr7	143492253	143492266	(15853707)	+	A-rich	Low_complexity	1	46	(0)	3772008
17	10.0	3.1	0.0	chr7	143492267	143492298	(15853675)	+	(AAACAA)n	Simple_repeat	1	33	(0)	3772009
12	15.3	3.5	0.0	chr7	143496323	143496351	(15849622)	+	(CCATT)n	Simple_repeat	1	30	(0)	3772016
1149	23.7	6.8	1.9	chr7	147298636	147298945	(12047028)	C	MER58B	DNA/hAT-Charlie	(15)	326	1	3777073
426	33.9	0.4	5.9	chr7	147298997	147299234	(12046739)	C	L3	LINE/CR1	(162)	3937	3713	3777074
308	35.2	7.0	1.9	chr7	147509094	147509255	(11836718)	+	L2c	LINE/L2	3040	3210	(177)	3777365
264	28.2	7.8	0.0	chr7	147510012	147510082	(11835891)	C	MER5A	DNA/hAT-Charlie	(51)	138	62	3777367
222	34.4	5.9	1.0	chr7	147510984	147511080	(11834893)	C	MER5A	DNA/hAT-Charlie	(0)	189	88	3777369
2966	12.8	4.4	11.3	chr7	148606964	148607460	(10738513)	C	MER34B	LTR/ERV1	(85)	480	1	3779081
17	0.0	0.0	0.0	chr7	148609104	148609122	(10736851)	+	(A)n	Simple_repeat	1	19	(0)	3779087
281	28.3	8.5	7.1	chr7	148609383	148609580	(10736393)	C	MLT1L	LTR/ERVL-MaLR	(16)	594	394	3779088
320	35.0	4.9	0.0	chr7	148772740	148772876	(10573097)	C	MER117	DNA/hAT-Charlie	(0)	197	54	3779358
765	0.0	0.0	0.0	chr7	148941488	148941571	(10404402)	+	HY5	scRNA	1	84	(0)	3779656
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
16	25.2	0.0	3.6	chr7	149147655	149147709	(10198264)	+	(CGG)n	Simple_repeat	1	55	(0)	3780152
2128	12.8	0.3	1.6	chr7	149233486	149233791	(10112182)	+	AluSz	SINE/Alu	1	302	(10)	3780344
15	0.0	0.0	0.0	chr7	149239672	149239690	(10106283)	+	(CGG)n	Simple_repeat	1	19	(0)	3780360
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
46	21.0	4.8	0.8	chr7	150903473	150903547	(8442426)	+	(CT)n	Simple_repeat	2	77	(0)	3782626
214	35.5	5.7	4.0	chr7	150903712	150903884	(8442089)	C	L3b	LINE/CR1	(492)	4740	4565	3782627
12	21.2	7.1	1.7	chr7	151080620	151080675	(8265298)	+	(GCCGCT)n	Simple_repeat	1	60	(0)	3782871
12	20.4	8.6	1.6	chr7	151252224	151252281	(8093692)	+	GA-rich	Low_complexity	1	63	(0)	3783107
21	7.6	0.0	0.0	chr7	151252414	151252441	(8093532)	+	(TG)n	Simple_repeat	1	28	(0)	3783108
42	15.3	1.4	0.0	chr7	151252441	151252513	(8093460)	+	GA-rich	Low_complexity	1	74	(0)	3783109
1851	16.6	1.3	0.3	chr7	151599526	151599833	(7746140)	C	MER1B	DNA/hAT-Charlie	(28)	311	1	3783727
199	32.9	5.2	1.4	chr7	151600046	151600119	(7745854)	C	MIRb	SINE/MIR	(165)	103	27	3783728
271	32.0	3.1	2.1	chr7	151687577	151687758	(7658215)	C	MIR3	SINE/MIR	(7)	201	20	3783896
21	6.7	0.0	2.9	chr7	151688002	151688035	(7657938)	+	(GGA)n	Simple_repeat	1	34	(0)	3783897
18	3.7	3.6	0.0	chr7	151727715	151727742	(7618231)	+	(GAGG)n	Simple_repeat	1	29	(0)	3783951
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
14	27.5	2.9	2.8	chr7	155003419	155003487	(4342486)	+	G-rich	Low_complexity	1	71	(0)	3789016
2395	9.4	0.0	0.0	chr7	155230670	155230968	(4115005)	C	AluSx	SINE/Alu	(13)	299	1	3789386
240	22.1	4.2	0.5	chr7	155918469	155919104	(3426869)	+	(GT)n	Simple_repeat	1	663	(0)	3790248
4344	28.6	16.1	2.9	chr7	156751123	156753884	(2592089)	C	L2a	LINE/L2	(82)	3344	23	3791289
2550	5.3	0.7	0.0	chr7	157308803	157309105	(2036868)	C	AluSp	SINE/Alu	(8)	305	1	3792252
4100	11.6	2.7	4.1	chr7	157309106	157309293	(2036680)	C	MER41B	LTR/ERV1	(449)	185	1	3792249
1156	23.3	1.9	3.2	chr7	157309294	157309418	(2036555)	+	MER34C2	LTR/ERV1	433	550	(5)	3792248
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
14	28.9	3.1	1.5	chr8	232275	232339	(144906297)	+	(CCCTGC)n	Simple_repeat	1	67	(0)	3794612
407	28.8	11.1	1.4	chr8	8251790	8251964	(136886672)	+	MIR3	SINE/MIR	18	204	(4)	3804408
300	22.3	12.0	3.7	chr8	8537728	8537834	(136600802)	+	MER96	DNA/hAT-Tip100	58	174	(1)	3804903
2106	13.6	0.0	1.6	chr8	8538169	8538485	(136600151)	C	AluSz	SINE/Alu	(0)	312	1	3804904
1373	25.9	9.5	6.2	chr8	8625706	8626233	(136512403)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	3805037
16	18.6	6.1	0.0	chr8	10054373	10054421	(135084215)	+	(CCGCCCG)n	Simple_repeat	1	52	(0)	3807508
1735	19.1	6.6	0.0	chr8	11499071	11499394	(133639242)	+	Tigger3a	DNA/TcMar-Tigger	1	347	(1)	3809674
905	32.3	5.2	5.4	chr8	11499395	11499986	(133638650)	+	L4_A_Mam	LINE/RTE-X	4400	4990	(0)	3809675
471	38.7	0.5	0.5	chr8	13193684	13193870	(131944766)	C	LFSINE_Vert	SINE/tRNA	(151)	308	122	3812279
2123	12.0	5.5	3.1	chr8	16749476	16749828	(128388808)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3817185
39	6.7	0.0	0.0	chr8	16826065	16826111	(128312525)	+	(AC)n	Simple_repeat	1	47	(0)	3817319
16	13.1	0.0	0.0	chr8	17027213	17027237	(128111399)	+	(C)n	Simple_repeat	1	25	(0)	3817596
4014	12.0	2.4	6.5	chr8	17082931	17083633	(128055003)	C	LTR8	LTR/ERV1	(18)	673	1	3817685
467	33.1	16.3	1.8	chr8	19128019	19128400	(126010236)	+	L3	LINE/CR1	3527	3974	(125)	3820685
415	27.3	0.0	0.0	chr8	19192987	19193096	(125945540)	+	MER94	DNA/hAT-Blackjack	25	134	(0)	3820819
2045	8.6	5.7	0.0	chr8	23354950	23355244	(121783392)	C	AluSq2	SINE/Alu	(0)	313	1	3827769
1331	32.2	12.6	6.2	chr8	23355245	23355512	(121783124)	C	L3	LINE/CR1	(279)	3820	3495	3827768
1331	32.2	12.6	6.2	chr8	23355897	23356349	(121782287)	C	L3	LINE/CR1	(660)	3439	2980	3827768
274	31.2	11.7	1.5	chr8	23356362	23356491	(121782145)	C	MamTip2	DNA/hAT-Tip100	(160)	145	1	3827772
181	28.2	2.5	1.3	chr8	23547952	23548030	(121590606)	C	MIR1_Amn	SINE/MIR	(96)	134	55	3828134
2382	10.4	0.3	0.0	chr8	23548168	23548475	(121590161)	C	AluSc8	SINE/Alu	(0)	311	3	3828135
225	26.6	8.9	6.5	chr8	26641836	26641988	(118496648)	C	UCON89	DNA/hAT?	(0)	242	86	3833093
218	18.8	2.0	2.0	chr8	26642158	26642206	(118496430)	C	L2a	LINE/L2	(0)	3426	3378	3833094
291	32.6	2.6	9.7	chr8	26642387	26642634	(118496002)	C	L2	LINE/L2	(529)	2890	2661	3833095
729	32.2	9.6	3.8	chr8	27616722	27617316	(117521320)	C	L3b	LINE/CR1	(74)	4025	3529	3834677
502	25.0	3.5	1.4	chr8	27772777	27772918	(117365718)	+	MIR	SINE/MIR	88	232	(30)	3834959
322	2.9	0.0	0.0	chr8	27774167	27774228	(117364408)	C	AluSc	SINE/Alu	(0)	309	247	3834964
12	17.6	0.0	0.0	chr8	28890070	28890096	(116248540)	+	(CCTTT)n	Simple_repeat	1	27	(0)	3837024
379	34.2	3.4	3.1	chr8	28956411	28956796	(116181840)	C	L1M5	LINE/L1	(1089)	5057	4671	3837146
3345	12.8	4.3	0.4	chr8	28956810	28957578	(116181058)	+	L1PA16	LINE/L1	5307	6163	(3)	3837147
793	28.3	7.7	6.0	chr8	29171442	29171746	(115966890)	+	Tigger18a	DNA/TcMar-Tigger	250	561	(291)	3837455
753	28.6	6.7	6.5	chr8	29511384	29511765	(115626871)	C	LTR16D	LTR/ERVL	(2)	649	201	3838046
1800	16.3	0.0	3.6	chr8	29664837	29665142	(115473494)	+	AluJb	SINE/Alu	3	297	(15)	3838308
15	19.9	0.0	0.0	chr8	29675551	29675579	(115463057)	+	(T)n	Simple_repeat	1	29	(0)	3838326
626	29.9	3.4	1.3	chr8	29770198	29770431	(115368205)	+	MIRb	SINE/MIR	30	268	(0)	3838479
12	10.0	0.0	0.0	chr8	29848485	29848506	(115290130)	+	(TTCT)n	Simple_repeat	1	22	(0)	3838597
12	24.0	4.5	0.0	chr8	29887484	29887527	(115251109)	+	GA-rich	Low_complexity	1	46	(0)	3838658
231	29.3	3.9	0.0	chr8	29990988	29991062	(115147574)	+	CR1-16_AMi	LINE/CR1	514	591	(260)	3838821
300	29.9	11.1	1.5	chr8	30254842	30255068	(114883568)	+	L2a	LINE/L2	3125	3426	(0)	3839383
2271	22.7	3.3	2.8	chr8	31820081	31820588	(113318048)	C	LTR40A1	LTR/ERVL	(71)	513	3	3842061
595	25.6	4.1	6.7	chr8	31945739	31946065	(113192571)	C	CR1-16_AMi	LINE/CR1	(122)	729	412	3842204
184	31.3	11.5	6.5	chr8	32631467	32631589	(112507047)	C	MamRTE1	LINE/RTE-BovB	(2048)	1764	1635	3843280
13	10.0	5.9	2.8	chr8	32631698	32631731	(112506905)	+	(ATATAG)n	Simple_repeat	1	36	(0)	3843281
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
323	25.7	8.1	3.4	chr8	37143324	37143440	(107995196)	C	MIRb	SINE/MIR	(59)	209	87	3849895
36	16.8	0.0	0.0	chr8	37381210	37381271	(107757365)	+	(TG)n	Simple_repeat	1	62	(0)	3850226
496	29.9	4.4	2.8	chr8	37515782	37515960	(107622676)	+	MIR3	SINE/MIR	14	195	(13)	3850448
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
1806	16.0	3.0	2.3	chr8	38898745	38899044	(106239592)	C	AluJr	SINE/Alu	(9)	303	2	3853169
1218	28.7	16.4	1.8	chr8	39037848	39038714	(106099922)	+	L2a	LINE/L2	2395	3423	(3)	3853420
652	33.5	2.8	0.0	chr8	40175481	40175692	(104962944)	+	MIRb	SINE/MIR	43	260	(8)	3854947
2155	21.1	7.7	1.9	chr8	40349869	40350399	(104788237)	C	MER44D	DNA/TcMar-Tigger	(112)	593	29	3855231
3430	7.5	0.2	0.0	chr8	41072767	41073194	(104065442)	C	MER4E1	LTR/ERV1	(2)	779	351	3856361
1834	20.9	3.6	15.7	chr8	41073200	41073405	(104065231)	+	MER31-int	LTR/ERV1	3814	3947	(989)	3856353
2409	10.4	0.0	0.0	chr8	41073406	41073713	(104064923)	+	AluSq2	SINE/Alu	1	308	(5)	3856362
340	29.3	9.6	0.7	chr8	41221668	41221818	(103916818)	C	Charlie19a	DNA/hAT-Charlie	(79)	307	142	3856653
24	11.9	0.0	0.0	chr8	41250929	41250965	(103887671)	+	(GT)n	Simple_repeat	1	37	(0)	3856703
192	25.5	0.0	2.1	chr8	42207789	42207836	(102930800)	C	L3	LINE/CR1	(1)	4098	4052	3858340
2047	12.0	0.0	3.3	chr8	42256281	42256580	(102882056)	+	AluSq2	SINE/Alu	2	291	(22)	3858453
4106	22.2	12.2	13.1	chr8	42256581	42257221	(102881415)	C	MER31-int	LTR/ERV1	(1443)	3493	2864	3858449
1460	13.8	1.2	5.2	chr8	42391246	42391514	(102747122)	+	AluJo	SINE/Alu	1	258	(54)	3858711
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
1583	14.6	3.9	1.4	chr8	43093803	43094077	(102044559)	+	AluJb	SINE/Alu	1	282	(30)	3860104
19	6.9	3.2	0.0	chr8	43094078	43094108	(102044528)	+	(TAT)n	Simple_repeat	1	32	(0)	3860105
1637	5.7	20.1	0.0	chr8	43094109	43094335	(102044301)	C	AluSx1	SINE/Alu	(27)	285	2	3860106
11	29.7	1.8	1.8	chr8	47960107	47960161	(97178475)	+	(CCCGCT)n	Simple_repeat	1	56	(0)	3862668
3375	23.1	7.2	1.9	chr8	48369110	48370366	(96768270)	C	L1MD2	LINE/L1	(4413)	2220	824	3863239
206	30.6	0.0	0.0	chr8	48420520	48420568	(96718068)	+	L2b	LINE/L2	3316	3364	(11)	3863293
203	26.8	6.6	2.7	chr8	48420602	48420674	(96717962)	C	L2c	LINE/L2	(1)	3386	3311	3863294
2362	9.4	0.0	0.3	chr8	48626949	48627255	(96511381)	C	AluYk2	SINE/Alu	(5)	306	1	3863530
18725	16.4	2.9	2.6	chr8	52762211	52764266	(92374370)	+	LTR57-int	LTR/ERVL	1143	3236	(2107)	3868629
8324	16.4	0.9	2.8	chr8	52764249	52765331	(92373305)	+	LTR57-int	LTR/ERVL	3983	5050	(293)	3868629
3794	19.5	4.3	1.6	chr8	53944746	53945626	(91193010)	+	L1MB7	LINE/L1	5270	6175	(9)	3870182
331	31.4	7.1	0.0	chr8	57560993	57561110	(87577526)	+	MIRb	SINE/MIR	121	247	(21)	3875491
13	14.2	3.2	0.0	chr8	57561372	57561402	(87577234)	+	(CCAGGC)n	Simple_repeat	1	32	(0)	3875492
15	19.6	0.0	0.0	chr8	58752113	58752141	(86386495)	+	A-rich	Low_complexity	1	29	(0)	3877045
405	31.7	12.1	0.0	chr8	58752142	58752357	(86386279)	C	MIRb	SINE/MIR	(6)	256	14	3877046
187	31.3	8.8	2.4	chr8	58830243	58830327	(86308309)	+	AmnSINE1	SINE/5S-Deu-L2	393	483	(92)	3877145
199	35.1	14.6	1.3	chr8	58856136	58856366	(86282270)	+	L2c	LINE/L2	3069	3335	(52)	3877177
477	27.6	3.3	6.5	chr8	58856527	58856550	(86282086)	+	L2a	LINE/L2	3277	3298	(128)	3877179
893	28.2	13.5	2.2	chr8	58856551	58857003	(86281633)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	3877180
13	18.9	0.0	0.0	chr8	58879714	58879743	(86258893)	+	A-rich	Low_complexity	1	30	(0)	3877206
263	28.9	2.0	8.5	chr8	61591707	61591812	(83546824)	C	MIR	SINE/MIR	(159)	103	5	3880853
399	14.4	2.2	6.2	chr8	61713214	61713309	(83425327)	C	L2a	LINE/L2	(0)	3426	3335	3880997
185	13.8	0.0	0.0	chr8	61713335	61713363	(83425273)	C	L2a	LINE/L2	(173)	3253	3225	3880997
863	23.8	4.5	0.9	chr8	61759746	61759978	(83378658)	C	LTR16E1	LTR/ERVL	(1)	537	296	3881082
13	29.6	1.5	3.0	chr8	63038959	63039023	(82099613)	+	(GCCCGC)n	Simple_repeat	1	66	(0)	3882621
17	18.6	0.0	0.0	chr8	63038992	63039028	(82099608)	+	(CCCCGA)n	Simple_repeat	1	37	(0)	3882622
414	24.4	4.8	4.0	chr8	65731007	65731130	(79407506)	C	L2a	LINE/L2	(2)	3424	3300	3886304
214	36.1	0.0	1.2	chr8	65731162	65731245	(79407391)	+	L2c	LINE/L2	3288	3370	(17)	3886305
7773	20.2	5.7	4.5	chr8	65973806	65974145	(79164491)	+	MLT1A1-int	LTR/ERVL-MaLR	1387	1735	(0)	3886691
1752	19.0	12.3	0.0	chr8	65974146	65974503	(79164133)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3886691
442	29.9	12.8	0.0	chr8	66517268	66517444	(78621192)	C	MIRb	SINE/MIR	(5)	263	61	3887527
21	3.0	5.9	0.0	chr8	66523107	66523140	(78615496)	+	(CTGGGAG)n	Simple_repeat	1	36	(0)	3887534
406	29.4	11.0	1.3	chr8	66536059	66536275	(78602361)	+	MIRb	SINE/MIR	21	261	(7)	3887567
2315	9.4	1.0	0.0	chr8	66560986	66561282	(78577354)	+	AluSz	SINE/Alu	1	300	(12)	3887617
14	24.0	5.8	2.7	chr8	66613395	66613463	(78525173)	+	G-rich	Low_complexity	1	73	(0)	3887701
14	15.6	5.6	0.0	chr8	66667191	66667226	(78471410)	+	(CACT)n	Simple_repeat	1	38	(0)	3887826
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
29	0.0	0.0	0.0	chr8	67343821	67343847	(77794789)	+	(GCG)n	Simple_repeat	1	27	(0)	3889097
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
186	24.5	0.0	5.4	chr8	68752187	68752242	(76386394)	C	L3	LINE/CR1	(197)	3902	3850	3891082
554	24.9	10.4	5.0	chr8	68752391	68752572	(76386064)	+	MER63A	DNA/hAT-Blackjack	7	199	(11)	3891083
2694	8.3	0.6	0.0	chr8	68857964	68858314	(76280322)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	3891228
15	15.3	0.0	0.0	chr8	68862553	68862581	(76276055)	+	(CTG)n	Simple_repeat	1	29	(0)	3891238
20	11.6	0.0	0.0	chr8	68862572	68862600	(76276036)	+	(T)n	Simple_repeat	1	29	(0)	3891239
10261	9.4	3.2	0.3	chr8	68968080	68969597	(76169039)	+	L1P3	LINE/L1	2788	4350	(1796)	3891382
193	34.3	10.8	3.5	chr8	69074351	69074746	(76063890)	C	L2c	LINE/L2	(4)	3383	2956	3891525
207	39.4	4.5	1.2	chr8	71831482	71831653	(73306983)	+	L2c	LINE/L2	2541	2718	(701)	3895734
239	26.8	6.8	0.0	chr8	71832842	71832923	(73305713)	C	MIR3	SINE/MIR	(47)	161	74	3895738
73	0.0	0.0	0.0	chr8	73325953	73326014	(71812622)	+	(GT)n	Simple_repeat	1	62	(0)	3897786
333	31.6	9.5	2.6	chr8	73520553	73520747	(71617889)	+	MLT1L	LTR/ERVL-MaLR	165	374	(236)	3898087
1119	17.2	0.5	0.5	chr8	73520769	73520961	(71617675)	+	MLT1L	LTR/ERVL-MaLR	418	610	(0)	3898087
381	23.6	5.3	5.3	chr8	73579411	73579562	(71559074)	+	MER126	DNA	298	449	(0)	3898167
2001	13.1	7.9	3.0	chr8	73621102	73621463	(71517173)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3898225
181	38.2	7.5	3.5	chr8	76616951	76617091	(68521545)	C	MIR1_Amn	SINE/MIR	(83)	147	1	3902475
33	3.1	0.0	0.0	chr8	76778492	76778524	(68360112)	+	(CA)n	Simple_repeat	1	33	(0)	3902652
3180	18.4	5.8	2.8	chr8	78791988	78793335	(66345301)	+	L1MB7	LINE/L1	4682	6089	(95)	3905110
6781	13.1	2.6	0.9	chr8	78793341	78794431	(66344205)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1309	3905111
1616	13.6	0.4	3.6	chr8	78794407	78794681	(66343955)	C	Tigger1	DNA/TcMar-Tigger	(1274)	1144	879	3905111
1248	16.8	4.6	0.0	chr8	79339469	79339676	(65798960)	+	MER58A	DNA/hAT-Charlie	2	219	(5)	3905848
16	0.0	0.0	0.0	chr8	79819187	79819204	(65319432)	+	(A)n	Simple_repeat	1	18	(0)	3906573
15410	15.7	4.8	0.9	chr8	82673847	82677097	(62461539)	+	L1PA13	LINE/L1	1	3387	(3379)	3910937
6047	9.0	2.9	1.5	chr8	89906396	89907958	(55230678)	C	L1PA13	LINE/L1	(124)	6039	4463	3920472
260	6.2	0.0	0.0	chr8	89907954	89908001	(55230635)	C	L1PA13	LINE/L1	(1643)	4503	4456	3920472
343	34.0	7.7	5.5	chr8	90536592	90536756	(54601880)	+	MIR3	SINE/MIR	23	191	(17)	3921307
336	26.1	11.1	2.2	chr8	90770179	90770358	(54368278)	+	LTR78	LTR/ERV1	1056	1253	(51)	3921598
462	30.6	9.4	1.1	chr8	90770410	90770594	(54368042)	C	MIRb	SINE/MIR	(14)	254	53	3921599
62	0.0	0.0	0.0	chr8	92627784	92627836	(52510800)	+	(AC)n	Simple_repeat	1	53	(0)	3924078
16	0.0	0.0	0.0	chr8	92758452	92758469	(52380167)	+	(A)n	Simple_repeat	1	18	(0)	3924263
4362	13.3	0.8	0.2	chr8	93873619	93874248	(51264388)	C	MER41B	LTR/ERV1	(0)	634	1	3925971
3659	15.7	6.1	4.2	chr8	93874249	93874676	(51263960)	C	LTR8A	LTR/ERV1	(2)	725	316	3925972
3810	14.9	2.1	4.5	chr8	93935996	93936662	(51201974)	C	LTR62	LTR/ERVL	(2)	707	57	3926081
446	24.1	9.6	3.0	chr8	94025007	94025212	(51113424)	+	L2a	LINE/L2	3191	3388	(38)	3926190
2334	8.5	0.3	0.3	chr8	94035692	94035986	(51102650)	+	AluSc8	SINE/Alu	2	296	(15)	3926215
255	30.6	0.0	0.0	chr8	94036261	94036332	(51102304)	C	Tigger19b	DNA/TcMar-Tigger	(4)	546	475	3926216
1592	15.3	1.4	3.4	chr8	94059213	94059503	(51079133)	+	MER4D	LTR/ERV1	1	285	(638)	3926250
1694	20.5	2.2	0.6	chr8	94059564	94059912	(51078724)	+	MER4D	LTR/ERV1	549	903	(0)	3926250
1694	15.0	5.5	2.5	chr8	94212161	94212440	(50926196)	C	AluJb	SINE/Alu	(23)	289	1	3926469
428	30.7	10.5	1.4	chr8	94224546	94224823	(50913813)	+	Tigger14a	DNA/TcMar-Tigger	1	306	(18)	3926487
17	10.5	3.2	0.0	chr8	94225126	94225156	(50913480)	+	(TAT)n	Simple_repeat	1	32	(0)	3926488
248	30.9	10.6	1.3	chr8	94241992	94242145	(50896491)	+	MIR3	SINE/MIR	20	189	(19)	3926527
217	25.0	1.9	0.0	chr8	94259142	94259193	(50879443)	+	L3	LINE/CR1	3934	3986	(113)	3926556
788	0.0	0.0	0.0	chr8	95269657	95269738	(49868898)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3928507
266	20.5	15.3	1.6	chr8	97090160	97090283	(48048353)	+	MIRc	SINE/MIR	35	178	(90)	3931212
1749	27.7	4.3	0.7	chr8	97090957	97091519	(48047117)	C	MER90a	LTR/ERV1	(25)	589	6	3931213
14	19.1	0.0	6.4	chr8	97644083	97644129	(47494507)	+	(GCCCC)n	Simple_repeat	1	47	(0)	3932076
213	32.4	1.0	8.1	chr8	97918355	97918465	(47220171)	C	L2c	LINE/L2	(27)	3360	3258	3932731
16	8.5	0.0	0.0	chr8	99706158	99706182	(45432454)	+	(ACC)n	Simple_repeat	1	25	(0)	3935574
250	33.6	4.6	4.6	chr8	99893781	99893911	(45244725)	+	MIR	SINE/MIR	42	172	(90)	3935817
15	9.7	0.0	0.0	chr8	100150590	100150611	(44988025)	+	(AG)n	Simple_repeat	1	22	(0)	3936243
2071	10.9	2.7	0.0	chr8	100714449	100714732	(44423904)	+	AluSz	SINE/Alu	1	292	(20)	3937320
451	30.8	9.4	9.2	chr8	100788926	100789379	(44349257)	C	L2c	LINE/L2	(15)	3372	2918	3937518
769	30.3	15.2	2.9	chr8	101158984	101159571	(43979065)	C	L2c	LINE/L2	(940)	2479	1807	3938266
260	26.4	3.3	3.3	chr8	101446320	101446409	(43692227)	+	Eulor5A	DNA?	226	315	(1)	3938773
290	30.2	13.0	0.0	chr8	101451938	101452098	(43686538)	C	MIRc	SINE/MIR	(75)	193	2	3938783
12	12.0	3.7	0.0	chr8	102656127	102656153	(42482483)	+	(CCGCT)n	Simple_repeat	1	28	(0)	3940830
13	18.1	0.0	7.0	chr8	102806671	102806713	(42331923)	+	G-rich	Low_complexity	1	43	(0)	3941146
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
2154	13.5	1.0	0.0	chr8	103288453	103288749	(41849887)	C	AluJb	SINE/Alu	(12)	300	1	3942068
15607	11.7	2.8	0.6	chr8	103288750	103290339	(41848297)	C	Tigger1	DNA/TcMar-Tigger	(800)	1618	2	3942067
41	0.0	0.0	0.0	chr8	103298774	103298810	(41839826)	+	(CCG)n	Simple_repeat	1	37	(0)	3942079
673	22.2	13.0	6.4	chr8	103349059	103349323	(41789313)	+	MLT1L	LTR/ERVL-MaLR	2	286	(324)	3942163
11	12.8	8.8	0.0	chr8	104223406	104223439	(40915197)	+	(CCGCCT)n	Simple_repeat	1	37	(0)	3943387
334	29.6	2.7	2.7	chr8	104662278	104662388	(40476248)	C	MIRc	SINE/MIR	(65)	203	93	3944044
1368	28.4	1.9	1.9	chr8	105069472	105069833	(40068803)	C	LTR16D	LTR/ERVL	(2)	649	288	3944668
241	29.0	20.5	6.1	chr8	105069858	105070022	(40068614)	C	LTR16D	LTR/ERVL	(442)	209	15	3944668
26	14.0	0.0	0.0	chr8	105139182	105139222	(39999414)	+	(A)n	Simple_repeat	1	41	(0)	3944767
2049	15.0	6.5	0.0	chr8	106060474	106060807	(39077829)	+	LTR18A	LTR/ERVL	1	357	(0)	3945971
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
484	24.0	13.1	11.0	chr8	115427426	115427589	(29711047)	C	MIRb	SINE/MIR	(66)	202	35	3958691
16	18.9	0.0	0.0	chr8	115451941	115451976	(29686660)	+	(CCCACT)n	Simple_repeat	1	36	(0)	3958725
329	35.5	9.8	3.8	chr8	115978102	115978312	(29160324)	+	MIRc	SINE/MIR	44	268	(0)	3959357
367	32.2	11.8	4.0	chr8	115978325	115978573	(29160063)	C	AmnSINE1	SINE/5S-Deu-L2	(282)	293	23	3959358
2164	13.4	0.0	0.0	chr8	117909765	117910062	(27228574)	C	AluSz	SINE/Alu	(9)	303	6	3962347
263	28.1	14.8	0.8	chr8	117913754	117913875	(27224761)	C	MIRc	SINE/MIR	(23)	245	104	3962356
64	1.7	0.0	0.0	chr8	118440658	118440716	(26697920)	+	(AC)n	Simple_repeat	1	59	(0)	3963320
421	29.7	4.9	8.9	chr8	118441015	118441443	(26697193)	+	MER113	DNA/hAT-Charlie	109	519	(2)	3963321
205	28.6	8.5	12.5	chr8	118905040	118905199	(26233437)	+	MIRc	SINE/MIR	102	254	(14)	3964034
365	29.9	2.2	7.9	chr8	118906627	118906725	(26231911)	+	MER5B	DNA/hAT-Charlie	1	94	(84)	3964038
2042	14.4	4.1	2.8	chr8	118906726	118907082	(26231554)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3964039
17	4.9	0.0	0.0	chr8	119579719	119579739	(25558897)	+	(AT)n	Simple_repeat	1	21	(0)	3965027
41	0.0	0.0	0.0	chr8	119585928	119585962	(25552674)	+	(AC)n	Simple_repeat	1	35	(0)	3965035
330	33.0	15.6	2.6	chr8	120346588	120346892	(24791744)	+	L2c	LINE/L2	3025	3376	(11)	3966461
266	20.7	1.7	0.0	chr8	120590399	120590456	(24548180)	+	MIR	SINE/MIR	149	207	(55)	3966836
2320	9.6	0.7	1.9	chr8	120590671	120590984	(24547652)	C	AluSg	SINE/Alu	(0)	310	1	3966837
2178	12.6	0.3	0.0	chr8	120971334	120971634	(24167002)	+	AluSx	SINE/Alu	2	303	(9)	3967481
850	32.0	5.1	4.6	chr8	121089371	121089720	(24048916)	+	MLT1I	LTR/ERVL-MaLR	1	352	(59)	3967683
248	30.8	3.7	8.2	chr8	121145727	121145821	(23992815)	+	MER102b	DNA/hAT-Charlie	3	93	(248)	3967760
1616	19.9	4.3	0.0	chr8	121145822	121146088	(23992548)	+	AluJb	SINE/Alu	1	279	(33)	3967761
417	23.0	2.6	0.0	chr8	122134676	122134788	(23003848)	C	LTR67B	LTR/ERVL	(1)	619	504	3969431
278	32.5	2.4	0.0	chr8	122312975	122313057	(22825579)	C	MER81	DNA/hAT-Blackjack	(0)	114	30	3969663
1110	25.7	4.5	0.9	chr8	122601642	122601868	(22536768)	C	L1ME4c	LINE/L1	(334)	496	264	3970166
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
2491	8.7	0.0	0.7	chr8	123275536	123275835	(21862801)	C	AluSx1	SINE/Alu	(14)	298	1	3971520
22	25.5	0.0	4.9	chr8	123490771	123490852	(21647784)	+	(TCTCTC)n	Simple_repeat	1	82	(0)	3972001
189	37.3	12.3	2.6	chr8	123680388	123680541	(21458095)	C	MamSINE1	SINE/tRNA-RTE	(91)	199	29	3972365
262	21.9	7.6	1.4	chr8	125328810	125328883	(19809753)	C	MIR3	SINE/MIR	(6)	202	124	3975342
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
947	27.2	13.3	1.7	chr8	127831308	127831849	(17306787)	C	L2	LINE/L2	(849)	2570	1956	3980197
13	26.6	2.2	0.0	chr8	127831868	127831913	(17306723)	+	(CTGCTCT)n	Simple_repeat	1	47	(0)	3980202
542	30.6	6.5	4.4	chr8	127851307	127851532	(17287104)	+	MIRb	SINE/MIR	3	233	(35)	3980245
13	12.8	2.6	5.1	chr8	127907828	127907865	(17230771)	+	(GGATG)n	Simple_repeat	1	39	(0)	3980375
265	32.2	5.3	3.4	chr8	127918302	127918449	(17220187)	+	MIRb	SINE/MIR	8	158	(110)	3980395
458	30.9	2.0	3.9	chr8	128108873	128109027	(17029609)	C	MIR	SINE/MIR	(80)	182	31	3980810
16	16.6	0.0	0.0	chr8	128176893	128176919	(16961717)	+	(T)n	Simple_repeat	1	27	(0)	3980965
317	31.3	11.8	0.7	chr8	128183178	128183328	(16955308)	+	L2b	LINE/L2	3205	3374	(1)	3980984
188	25.9	0.0	10.0	chr8	128183418	128183477	(16955159)	C	L2b	LINE/L2	(0)	3375	3322	3980985
349	37.0	8.0	1.4	chr8	128183450	128183834	(16954802)	+	L2a	LINE/L2	2887	3298	(128)	3980986
263	36.5	7.0	1.4	chr8	128666290	128666436	(16472200)	+	MIRc	SINE/MIR	2	157	(111)	3981880
480	34.4	7.5	7.0	chr8	128883114	128883510	(16255126)	+	L2b	LINE/L2	2973	3371	(4)	3982198
13	10.7	6.7	0.0	chr8	128883513	128883542	(16255094)	+	(ATGA)n	Simple_repeat	1	32	(0)	3982199
219	31.7	6.5	3.8	chr8	128883553	128883657	(16254979)	+	MIRc	SINE/MIR	9	116	(152)	3982200
2895	21.5	9.9	3.4	chr8	129707276	129708188	(15430448)	C	MER45B	DNA/hAT-Tip100	(0)	1040	69	3983646
7670	17.7	2.2	1.4	chr8	130067932	130069243	(15069393)	+	MER21-int	LTR/ERVL	2	1325	(2866)	3984309
12	14.6	0.0	5.9	chr8	130263058	130263091	(14875545)	+	(TACGAA)n	Simple_repeat	1	34	(0)	3984674
279	23.1	42.1	2.2	chr8	130263621	130263760	(14874876)	C	MIR	SINE/MIR	(68)	200	5	3984676
376	22.4	11.7	1.5	chr8	130263829	130263984	(14874652)	C	MIRc	SINE/MIR	(84)	184	6	3984677
549	24.8	0.7	4.0	chr8	130404701	130404851	(14733785)	+	MLT1H	LTR/ERVL-MaLR	56	201	(348)	3984948
187	34.3	0.0	4.3	chr8	130483333	130483402	(14655234)	+	L3	LINE/CR1	60	126	(3973)	3985150
46	5.2	3.3	0.0	chr8	130483638	130483697	(14654939)	+	(CA)n	Simple_repeat	1	62	(0)	3985151
275	29.1	9.8	0.6	chr8	130538621	130538796	(14599840)	+	L2	LINE/L2	2232	2425	(994)	3985290
1520	15.6	3.1	0.8	chr8	130538839	130539157	(14599479)	+	L1MB2	LINE/L1	5503	5858	(331)	3985291
448	22.7	6.3	4.7	chr8	130640310	130640480	(14498156)	C	MIRb	SINE/MIR	(9)	259	86	3985486
273	25.3	4.2	1.1	chr8	130640582	130640673	(14497963)	+	MIRb	SINE/MIR	172	266	(2)	3985487
189	31.4	0.0	5.5	chr8	130640855	130640945	(14497691)	+	L2c	LINE/L2	3298	3383	(4)	3985488
415	30.9	3.5	1.0	chr8	130672862	130673054	(14465582)	C	MIRc	SINE/MIR	(49)	219	22	3985562
505	30.5	11.4	0.5	chr8	130675783	130675993	(14462643)	C	MIRb	SINE/MIR	(11)	257	21	3985568
363	31.6	15.7	0.5	chr8	130866697	130866912	(14271724)	+	MIR	SINE/MIR	8	262	(0)	3985901
317	32.5	6.5	2.4	chr8	130904634	130904838	(14233798)	C	Tigger12	DNA/TcMar-Tigger	(2240)	235	22	3985959
1120	23.4	15.4	8.1	chr8	131856785	131857167	(13281469)	+	MLT1G	LTR/ERVL-MaLR	170	591	(0)	3987539
29	16.0	4.9	3.5	chr8	132775354	132775435	(12363201)	+	(GGC)n	Simple_repeat	1	86	(0)	3989225
12	11.1	4.3	8.3	chr8	132775498	132775543	(12363093)	+	(CGCTC)n	Simple_repeat	1	48	(0)	3989226
501	17.6	10.7	16.8	chr8	133217655	133217845	(11920791)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3990006
29	0.0	0.0	0.0	chr8	133217937	133217961	(11920675)	+	(CA)n	Simple_repeat	1	25	(0)	3990007
643	30.1	5.1	3.1	chr8	133218075	133218307	(11920329)	+	MIRb	SINE/MIR	14	254	(8)	3990008
12	19.4	4.7	2.2	chr8	133297384	133297426	(11841210)	+	G-rich	Low_complexity	1	45	(0)	3990151
17	17.6	4.4	0.0	chr8	133297583	133297627	(11841009)	+	(GTGTGC)n	Simple_repeat	1	47	(0)	3990152
776	26.9	5.6	9.7	chr8	134631547	134631917	(10506719)	+	L1MD1	LINE/L1	5883	6237	(5)	3992597
254	20.6	9.3	5.3	chr8	134631955	134632055	(10506581)	C	Charlie19a	DNA/hAT-Charlie	(41)	345	239	3992598
199	24.1	7.5	3.3	chr8	134712437	134712526	(10426110)	C	MIR	SINE/MIR	(118)	144	51	3992731
33	0.0	0.0	0.0	chr8	134712719	134712749	(10425887)	+	(GCGGCCG)n	Simple_repeat	1	31	(0)	3992732
14	14.9	5.4	0.0	chr8	134712801	134712837	(10425799)	+	(CCCCAC)n	Simple_repeat	1	39	(0)	3992733
16	4.5	0.0	0.0	chr8	134832489	134832511	(10306125)	+	(CACG)n	Simple_repeat	1	23	(0)	3992946
655	30.6	15.5	4.8	chr8	140955700	140956365	(4182271)	+	HAL1	LINE/L1	179	928	(1579)	4002872
1179	20.3	6.8	14.8	chr8	141009890	141010270	(4128366)	C	Zaphod	DNA/hAT-Tip100	(3067)	964	610	4002979
250	31.3	9.0	2.2	chr8	141010284	141010417	(4128219)	C	Zaphod	DNA/hAT-Tip100	(3363)	668	525	4002979
321	17.5	3.1	0.0	chr8	141010418	141010480	(4128156)	+	L1MB7	LINE/L1	6062	6126	(58)	4002988
402	32.7	4.4	5.1	chr8	141026651	141026924	(4111712)	+	MLT1M	LTR/ERVL-MaLR	155	426	(246)	4003025
30	5.0	2.3	2.3	chr8	141043490	141043532	(4095104)	+	(TG)n	Simple_repeat	1	44	(0)	4003062
326	15.6	3.0	0.0	chr8	142674023	142674086	(2464550)	C	LTR8A	LTR/ERV1	(440)	287	222	4005169
286	15.9	4.5	0.0	chr8	142674088	142674150	(2464486)	C	LTR8A	LTR/ERV1	(440)	287	222	4005169
262	17.5	4.5	0.0	chr8	142674152	142674214	(2464422)	C	LTR8A	LTR/ERV1	(440)	287	222	4005169
286	15.9	4.5	0.0	chr8	142674216	142674278	(2464358)	C	LTR8A	LTR/ERV1	(440)	287	222	4005169
363	15.4	1.5	0.0	chr8	142674280	142674344	(2464292)	C	LTR8A	LTR/ERV1	(440)	287	222	4005169
286	15.9	4.5	0.0	chr8	142674346	142674408	(2464228)	C	LTR8A	LTR/ERV1	(440)	287	222	4005169
634	17.4	23.3	1.3	chr8	142674410	142674643	(2463993)	C	LTR8A	LTR/ERV1	(440)	287	2	4005170
692	30.4	5.7	6.6	chr8	142699824	142700158	(2438478)	C	LTR43	LTR/ERV1	(140)	462	131	4005201
340	26.3	5.0	8.3	chr8	143281609	143281836	(1856800)	C	LTR50	LTR/ERVL	(509)	286	67	4006009
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
1147	11.3	0.0	1.8	chr8	143684160	143684327	(1454309)	+	AluSx	SINE/Alu	1	165	(147)	4006525
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
19	6.7	0.0	3.0	chr8	144104524	144104556	(1034080)	+	(TCGC)n	Simple_repeat	1	33	(0)	4007111
2640	3.9	0.0	0.0	chr8	144428784	144429088	(709548)	C	AluY	SINE/Alu	(6)	305	1	4007614
221	24.7	10.8	1.1	chr8	144901812	144901987	(236649)	+	L2a	LINE/L2	2962	3156	(270)	4008270
16	19.2	0.0	0.0	chr9	2810096	2810125	(135584592)	+	G-rich	Low_complexity	1	30	(0)	4012684
2324	23.1	1.9	2.1	chr9	4262443	4263020	(134131697)	C	MER119	DNA/hAT-Charlie	(0)	583	7	4014742
282	19.4	1.5	0.0	chr9	4297325	4297391	(134097326)	+	MIR3	SINE/MIR	67	134	(74)	4014803
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
272	31.9	0.0	0.0	chr9	4833414	4833507	(133561210)	C	MIR	SINE/MIR	(0)	262	169	4015750
2265	21.6	4.3	0.6	chr9	5388934	5389468	(133005249)	C	MER90	LTR/ERV1	(0)	575	20	4016402
3034	8.8	11.3	0.0	chr9	5500640	5501047	(132893670)	+	LTR46	LTR/ERV1	1	460	(0)	4016572
999	20.9	9.0	0.4	chr9	5509568	5509812	(132884905)	+	MLT1C	LTR/ERVL-MaLR	9	276	(191)	4016579
16	11.7	2.4	4.8	chr9	6566773	6566813	(131827904)	+	A-rich	Low_complexity	1	42	(0)	4018227
2044	13.2	3.2	0.0	chr9	6681834	6682135	(131712582)	C	AluSz6	SINE/Alu	(0)	312	1	4018486
15	19.6	0.0	0.0	chr9	7799980	7800008	(130594709)	+	(C)n	Simple_repeat	1	29	(0)	4020246
192	32.4	9.5	1.9	chr9	13358342	13358448	(125036269)	+	AmnSINE1	SINE/5S-Deu-L2	1	116	(459)	4027515
3503	15.2	0.2	0.2	chr9	13942734	13943281	(124451436)	+	MER44B	DNA/TcMar-Tigger	3	550	(0)	4028287
190	29.6	1.8	0.0	chr9	14221875	14221928	(124172789)	+	MIR3	SINE/MIR	100	154	(54)	4028670
206	26.9	1.9	0.0	chr9	16266866	16266917	(122127800)	+	L2a	LINE/L2	3373	3425	(1)	4031694
784	20.8	4.2	0.0	chr9	16337391	16337549	(122057168)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	4031812
882	23.2	3.7	2.8	chr9	16385591	16385807	(122008910)	+	MER58A	DNA/hAT-Charlie	2	220	(4)	4031882
211	25.6	1.3	11.4	chr9	16385970	16386057	(122008660)	C	L2a	LINE/L2	(71)	3355	3277	4031883
20	4.1	0.0	0.0	chr9	16626676	16626700	(121768017)	+	(CA)n	Simple_repeat	1	25	(0)	4032169
15	7.2	3.2	3.1	chr9	16628276	16628306	(121766411)	+	(CTCTGT)n	Simple_repeat	1	32	(0)	4032170
16	19.1	0.0	0.0	chr9	18405621	18405650	(119989067)	+	A-rich	Low_complexity	1	30	(0)	4034627
16	30.1	3.9	1.2	chr9	18438199	18438275	(119956442)	+	A-rich	Low_complexity	1	80	(0)	4034672
662	26.4	8.0	1.2	chr9	18658715	18658971	(119735746)	C	L1ME4c	LINE/L1	(246)	584	309	4034950
211	15.3	0.0	0.0	chr9	18976929	18976967	(119417750)	+	MIRb	SINE/MIR	195	237	(31)	4035338
281	26.8	8.5	1.0	chr9	21802343	21802440	(116592277)	+	MIRb	SINE/MIR	163	268	(0)	4039722
16	13.1	0.0	0.0	chr9	21802470	21802494	(116592223)	+	(A)n	Simple_repeat	1	25	(0)	4039727
17	30.0	3.7	1.2	chr9	22238272	22238352	(116156365)	+	(TTCTT)n	Simple_repeat	1	84	(0)	4040305
3473	10.9	5.5	0.0	chr9	26261370	26261917	(112132800)	C	LTR19B	LTR/ERV1	(0)	580	1	4045417
3410	14.2	3.3	5.0	chr9	26261918	26262406	(112132311)	C	LTR26	LTR/ERV1	(124)	479	1	4045416
2179	24.9	4.8	0.0	chr9	26265216	26265753	(112128964)	+	MLT1F1	LTR/ERVL-MaLR	1	565	(4)	4045422
732	27.8	1.9	2.3	chr9	29456978	29457194	(108937523)	C	MLT1G3	LTR/ERVL-MaLR	(6)	589	374	4049962
730	22.5	12.4	0.0	chr9	29637979	29638169	(108756548)	+	MSTD-int	LTR/ERVL-MaLR	1504	1721	(14)	4050175
250	35.4	6.7	3.0	chr9	29697240	29697440	(108697277)	+	Charlie16a	DNA/hAT-Charlie	132	340	(2)	4050254
260	30.8	18.0	3.6	chr9	31304710	31304874	(107089843)	+	MIRb	SINE/MIR	47	240	(28)	4052213
300	30.4	8.4	2.7	chr9	31304881	31305059	(107089658)	+	MIRc	SINE/MIR	45	231	(37)	4052214
16	0.0	0.0	0.0	chr9	32552175	32552192	(105842525)	+	(A)n	Simple_repeat	1	18	(0)	4053836
1530	15.1	8.3	0.7	chr9	33290031	33290308	(105104409)	+	AluJr	SINE/Alu	2	302	(10)	4055139
1173	20.0	3.5	8.7	chr9	33946858	33947191	(104447526)	+	MER68	LTR/ERVL	1	316	(247)	4056332
2067	22.5	5.0	0.0	chr9	34463317	34463773	(103930944)	C	Charlie20a	DNA/hAT-Charlie	(282)	525	45	4057480
857	29.8	11.8	7.9	chr9	34464056	34464789	(103929928)	+	L2c	LINE/L2	2625	3385	(2)	4057482
237	19.4	16.3	1.5	chr9	35096801	35096915	(103297802)	+	MIR	SINE/MIR	16	166	(102)	4058346
1074	26.8	7.9	10.9	chr9	36029525	36030073	(102364644)	+	Charlie15b	DNA/hAT-Charlie	42	572	(489)	4059815
311	20.6	1.0	10.2	chr9	36148842	36148949	(102245768)	C	L2b	LINE/L2	(39)	3336	3239	4060048
633	26.8	3.1	0.0	chr9	37414794	37414987	(100979730)	+	MIRb	SINE/MIR	18	223	(45)	4062620
339	25.6	3.5	4.9	chr9	37415108	37415251	(100979466)	+	L2b	LINE/L2	3011	3152	(223)	4062621
17	9.1	2.6	5.0	chr9	37785063	37785101	(100609616)	+	(CCGCTT)n	Simple_repeat	1	40	(0)	4063381
13	14.7	7.9	0.0	chr9	37904198	37904235	(100490482)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	4063617
195	31.2	5.1	5.1	chr9	41034704	41034821	(97359896)	+	L2b	LINE/L2	3256	3373	(2)	4068088
1704	8.2	0.0	0.5	chr9	42269085	42269304	(96125413)	C	AluSq2	SINE/Alu	(12)	301	83	4069794
281	28.2	4.7	9.0	chr9	42269388	42269587	(96125130)	+	MER68	LTR/ERVL	365	557	(7)	4069795
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
188	26.4	15.5	1.8	chr9	69175135	69175300	(69219417)	+	LFSINE_Vert	SINE/tRNA	6	198	(261)	4081174
480	25.5	7.9	2.5	chr9	69675127	69675386	(68719331)	+	L4_B_Mam	LINE/RTE-X	4637	5105	(33)	4081938
679	21.5	7.5	0.5	chr9	69898533	69898719	(68495998)	C	L1MC4	LINE/L1	(153)	7889	7689	4082288
233	31.6	4.1	6.7	chr9	69898825	69898973	(68495744)	+	L2	LINE/L2	2433	2577	(842)	4082289
11	13.8	2.8	5.4	chr9	70258925	70258960	(68135757)	+	(GCGCGA)n	Simple_repeat	1	37	(0)	4082831
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
62	21.8	2.4	5.1	chr9	76866682	76866890	(61527827)	+	GA-rich	Low_complexity	1	214	(0)	4093291
197	21.4	12.5	1.8	chr9	76866986	76867042	(61527675)	+	L2a	LINE/L2	3363	3426	(0)	4093287
7672	17.9	3.1	1.6	chr9	77708069	77709050	(60685667)	C	L1MCa	LINE/L1	(5007)	1501	505	4094681
240	27.9	2.5	3.7	chr9	77712925	77713006	(60681711)	C	Tigger19b	DNA/TcMar-Tigger	(123)	427	347	4094691
231	35.7	5.9	4.7	chr9	77807256	77807405	(60587312)	+	L4_A_Mam	LINE/RTE-X	4109	4260	(730)	4094824
457	29.6	2.6	0.7	chr9	77807552	77807704	(60587013)	+	L4_A_Mam	LINE/RTE-X	4286	4441	(549)	4094824
531	29.9	2.2	1.1	chr9	78714635	78714810	(59679907)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	234	4096179
795	11.1	0.0	0.0	chr9	78867051	78867158	(59527559)	+	AluSz6	SINE/Alu	203	310	(2)	4096378
2327	31.0	6.2	2.1	chr9	78933015	78933413	(59461304)	C	L2	LINE/L2	(529)	2890	2476	4096472
233	25.0	1.4	0.0	chr9	79023063	79023134	(59371583)	+	L1ME4a	LINE/L1	6050	6122	(2)	4096601
19	7.2	0.0	0.0	chr9	79571362	79571390	(58823327)	+	(CCA)n	Simple_repeat	1	29	(0)	4097445
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
1640	22.5	3.0	2.2	chr9	79686382	79686836	(58707881)	+	MLT1C	LTR/ERVL-MaLR	7	465	(2)	4097598
347	30.0	3.9	1.0	chr9	81028421	81028521	(57366196)	+	MIR3	SINE/MIR	87	190	(18)	4099313
15	19.8	5.6	1.8	chr9	81493102	81493155	(56901562)	+	(AGATAAG)n	Simple_repeat	1	57	(0)	4099979
13	21.6	8.2	2.5	chr9	81689772	81689844	(56704873)	+	(TCTCC)n	Simple_repeat	1	79	(0)	4100306
36	0.0	0.0	0.0	chr9	84170767	84170797	(54223920)	+	(TG)n	Simple_repeat	1	31	(0)	4104184
250	30.1	8.1	1.7	chr9	86734826	86734940	(51659777)	+	Tigger16b	DNA/TcMar-Tigger	24	146	(190)	4108372
631	28.2	8.3	2.3	chr9	86734974	86735234	(51659483)	C	LTR33	LTR/ERVL	(3)	512	235	4108373
476	25.2	10.3	0.0	chr9	86735279	86735417	(51659300)	C	LTR33	LTR/ERVL	(350)	165	11	4108373
16	8.7	0.0	0.0	chr9	88477463	88477487	(49917230)	+	(ATG)n	Simple_repeat	1	25	(0)	4111255
332	32.9	12.6	0.4	chr9	88746354	88746603	(49648114)	C	L2a	LINE/L2	(0)	3426	3142	4111674
865	26.8	12.7	3.1	chr9	88776422	88776834	(49617883)	+	MLT1F-int	LTR/ERVL-MaLR	1032	1489	(0)	4111704
343	25.4	10.4	2.1	chr9	88835480	88835620	(49559097)	+	HAL1	LINE/L1	2244	2397	(110)	4111788
1534	27.7	5.9	0.7	chr9	90992582	90992996	(47401721)	+	MER20B	DNA/hAT-Charlie	70	507	(276)	4114551
57	0.0	0.0	0.0	chr9	90993002	90993050	(47401667)	+	(TG)n	Simple_repeat	1	49	(0)	4114552
644	17.9	7.4	1.9	chr9	91395727	91395880	(46998837)	C	MER5A1	DNA/hAT-Charlie	(3)	163	1	4115150
255	29.7	11.9	1.7	chr9	92670393	92670512	(45724205)	+	MIRc	SINE/MIR	37	170	(92)	4117046
2181	9.8	0.0	7.1	chr9	93098899	93099223	(45295494)	C	AluSx3	SINE/Alu	(9)	302	1	4117711
325	32.0	7.3	0.7	chr9	94086499	94086652	(44308065)	C	L3	LINE/CR1	(817)	3282	3118	4118996
204	26.3	9.5	0.0	chr9	94086680	94086736	(44307981)	C	L2a	LINE/L2	(0)	3426	3364	4118997
650	29.4	8.6	0.8	chr9	94086709	94086922	(44307795)	C	MIRb	SINE/MIR	(31)	237	5	4118998
582	23.6	6.5	7.7	chr9	94914149	94914368	(43480349)	C	Charlie8	DNA/hAT-Charlie	(2043)	385	169	4120489
44	0.0	0.0	0.0	chr9	94914524	94914561	(43480156)	+	(GT)n	Simple_repeat	1	38	(0)	4120490
333	25.6	1.1	1.1	chr9	94914602	94914692	(43480025)	C	Charlie8	DNA/hAT-Charlie	(2255)	173	83	4120489
34	23.3	2.2	5.6	chr9	95317200	95317338	(43077379)	+	(CCCGCCT)n	Simple_repeat	1	142	(0)	4121018
12	23.5	1.8	5.4	chr9	95317779	95317833	(43076884)	+	G-rich	Low_complexity	1	56	(0)	4121019
404	35.2	10.6	4.2	chr9	98056160	98056396	(40338321)	C	MIRb	SINE/MIR	(1)	267	14	4125691
16	18.4	7.0	1.6	chr9	98056577	98056633	(40338084)	+	(CCCCG)n	Simple_repeat	1	61	(0)	4125692
187	31.2	7.0	11.5	chr9	98222966	98223338	(40171379)	C	L2b	LINE/L2	(3)	3372	3018	4126104
354	22.6	2.3	1.2	chr9	99269312	99269396	(39125321)	C	LTR89	LTR/ERVL?	(789)	90	5	4128127
271	24.3	0.0	2.8	chr9	100429245	100429316	(37965401)	+	MIRb	SINE/MIR	24	93	(175)	4130125
412	29.8	3.7	7.1	chr9	100429406	100429575	(37965142)	C	L2b	LINE/L2	(3)	3384	3221	4130126
250	37.6	5.7	0.0	chr9	103804414	103804562	(34590155)	C	L4_A_Mam	LINE/RTE-X	(3640)	1350	1193	4134851
11	18.9	0.0	7.1	chr9	105064690	105064731	(33329986)	+	(GCCAGCT)n	Simple_repeat	1	42	(0)	4136809
43	6.4	0.0	0.0	chr9	106892677	106892726	(31501991)	+	(CA)n	Simple_repeat	1	50	(0)	4139722
1853	32.0	14.5	0.5	chr9	107251455	107252584	(31142133)	+	L3	LINE/CR1	583	1896	(2203)	4140306
1533	24.3	7.4	0.0	chr9	107275034	107275473	(31119244)	+	L2a	LINE/L2	2578	3052	(367)	4140344
763	28.9	4.9	1.3	chr9	107732542	107732779	(30661938)	C	MIR	SINE/MIR	(0)	262	16	4141461
16	0.0	0.0	0.0	chr9	108056837	108056853	(30337864)	+	(A)n	Simple_repeat	1	17	(0)	4142123
253	14.3	0.0	2.0	chr9	108473812	108473861	(29920856)	+	UCON22	Unknown	65	113	(221)	4142784
730	30.9	7.9	3.9	chr9	108478454	108479201	(29915516)	C	MamRep605	LTR?	(52)	797	17	4142791
225	21.8	3.5	5.2	chr9	109001262	109001319	(29393398)	C	L2	LINE/L2	(544)	2875	2819	4143630
197	24.4	0.0	2.4	chr9	109001332	109001373	(29393344)	C	L2	LINE/L2	(560)	2859	2819	4143631
2248	22.0	5.8	2.4	chr9	109001375	109001923	(29392794)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	4143632
16	0.0	0.0	0.0	chr9	109035992	109036008	(29358709)	+	(A)n	Simple_repeat	1	17	(0)	4143690
200	28.1	13.6	0.0	chr9	109117946	109118034	(29276683)	+	MIRc	SINE/MIR	22	124	(144)	4143825
1288	26.2	10.4	0.0	chr9	109600126	109600557	(28794160)	+	LTR33	LTR/ERVL	19	500	(15)	4144823
14	4.2	3.7	3.6	chr9	109793526	109793552	(28601165)	+	(TTTG)n	Simple_repeat	1	28	(0)	4145137
367	38.5	7.5	2.2	chr9	109816240	109816872	(28577845)	C	L2	LINE/L2	(2202)	1217	549	4145167
12	11.2	3.2	3.1	chr9	110031959	110031989	(28362728)	+	(CATTCT)n	Simple_repeat	1	32	(0)	4145545
18	0.0	0.0	0.0	chr9	110032061	110032080	(28362637)	+	(A)n	Simple_repeat	1	20	(0)	4145546
354	34.3	14.1	3.2	chr9	110659792	110660264	(27734453)	C	L2c	LINE/L2	(439)	2980	2448	4146612
19	12.4	2.7	2.6	chr9	110753133	110753148	(27641569)	+	GA-rich	Low_complexity	1	17	(0)	4146748
863	24.6	0.0	1.6	chr9	111958161	111958350	(26436367)	C	LTR91	LTR/ERVL	(12)	187	1	4148876
2236	10.2	0.7	1.3	chr9	112021098	112021402	(26373315)	C	AluSq2	SINE/Alu	(10)	303	1	4149027
747	32.7	5.1	4.2	chr9	112050795	112051340	(26343377)	+	MLT1A-int	LTR/ERVL-MaLR	713	1313	(74)	4149075
208	25.4	1.5	0.0	chr9	112065843	112065909	(26328808)	+	MIR	SINE/MIR	187	254	(8)	4149101
369	26.8	16.2	3.4	chr9	112065927	112066135	(26328582)	C	MIRb	SINE/MIR	(20)	248	4	4149102
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
600	32.2	6.0	0.4	chr9	113578788	113579021	(24815696)	C	MIRc	SINE/MIR	(0)	268	21	4151947
237	16.4	3.3	3.7	chr9	113579165	113579232	(24815485)	+	MIRb	SINE/MIR	40	112	(156)	4151948
365	23.5	3.5	4.5	chr9	113621701	113621824	(24772893)	+	MIR3	SINE/MIR	32	149	(119)	4152034
15	28.2	0.0	2.2	chr9	113632061	113632105	(24762612)	+	(TG)n	Simple_repeat	1	45	(0)	4152060
501	21.5	2.4	0.8	chr9	113632112	113632233	(24762484)	+	MER20B	DNA/hAT-Charlie	36	159	(624)	4152061
816	29.6	9.9	0.4	chr9	114694075	114694322	(23700395)	+	MLT1J	LTR/ERVL-MaLR	1	274	(238)	4154244
359	27.9	6.5	5.0	chr9	114694458	114694697	(23700020)	C	MLT1H	LTR/ERVL-MaLR	(195)	354	62	4154245
248	30.6	10.0	0.9	chr9	114908140	114908248	(23486469)	+	L2c	LINE/L2	3264	3383	(4)	4154639
233	22.4	0.0	0.0	chr9	115019282	115019330	(23375387)	+	L3	LINE/CR1	3948	3996	(103)	4154866
477	29.0	2.5	1.3	chr9	115116006	115116162	(23278555)	C	MIRb	SINE/MIR	(6)	262	104	4155044
223	37.3	2.9	2.9	chr9	115167300	115167437	(23227280)	+	L2c	LINE/L2	3149	3286	(101)	4155138
23	5.2	2.2	6.4	chr9	115251068	115251113	(23143604)	+	(CTTT)n	Simple_repeat	1	47	(0)	4155284
233	31.9	8.7	1.1	chr9	115262348	115262442	(23132275)	C	MIRc	SINE/MIR	(126)	142	40	4155304
994	14.3	0.0	0.0	chr9	115373268	115373400	(23021317)	+	FLAM_C	SINE/Alu	1	133	(10)	4155496
1665	20.0	2.2	0.0	chr9	115591854	115592158	(22802559)	+	AluJr	SINE/Alu	1	312	(0)	4155833
503	18.6	3.3	2.5	chr9	115601545	115601665	(22793052)	C	UCON23	DNA/hAT-Tip100?	(28)	126	5	4155850
4980	13.7	0.6	0.6	chr9	115640444	115641529	(22753188)	C	L1PB4	LINE/L1	(69)	6087	5005	4155931
1331	27.7	5.6	5.6	chr9	115691088	115691676	(22703041)	+	MLT1L	LTR/ERVL-MaLR	22	610	(0)	4156030
331	31.6	7.6	8.7	chr9	115938798	115939186	(22455531)	+	L2	LINE/L2	1592	1975	(1444)	4156412
276	25.4	9.5	6.3	chr9	115939249	115939391	(22455326)	+	L2	LINE/L2	1951	2098	(1321)	4156412
4495	19.5	1.4	3.3	chr9	115939413	115941194	(22453523)	C	L1MB7	LINE/L1	(8)	6674	4932	4156413
627	21.7	12.8	0.0	chr9	116233908	116234036	(22160681)	+	AluJo	SINE/Alu	135	282	(30)	4156991
2085	13.7	0.0	2.0	chr9	116288089	116288394	(22106323)	+	AluSg	SINE/Alu	1	300	(10)	4157088
206	31.6	7.6	3.6	chr9	121271780	121271917	(17122800)	C	MIRc	SINE/MIR	(101)	167	24	4166643
242	26.2	1.2	1.2	chr9	121964011	121964091	(16430626)	C	Charlie24	DNA/hAT-Charlie	(32)	2418	2338	4168031
37	33.8	1.4	3.7	chr9	122093034	122093247	(16301470)	+	(CCG)n	Simple_repeat	1	217	(0)	4168287
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
193	25.4	1.5	5.6	chr9	122912997	122913067	(15481650)	+	L2b	LINE/L2	3303	3370	(5)	4169766
19	4.0	0.0	0.0	chr9	122913184	122913209	(15481508)	+	(TCC)n	Simple_repeat	1	26	(0)	4169767
344	31.5	12.7	5.8	chr9	123069345	123069455	(15325262)	C	L2c	LINE/L2	(25)	3362	3257	4170050
220	35.6	8.7	1.7	chr9	124309575	124309691	(14085026)	+	MIRb	SINE/MIR	123	248	(20)	4172367
11	28.6	0.0	0.0	chr9	124309958	124309996	(14084721)	+	(GGCCTG)n	Simple_repeat	1	39	(0)	4172368
189	22.1	12.8	2.9	chr9	124708943	124709012	(13685705)	C	AmnSINE2	SINE/tRNA-Deu	(172)	186	109	4173083
761	30.5	2.1	5.2	chr9	124833090	124833278	(13561439)	+	MIR	SINE/MIR	22	215	(47)	4173338
26	20.9	0.0	0.0	chr9	125189733	125189788	(13204929)	+	(GCG)n	Simple_repeat	1	56	(0)	4174090
2568	6.7	0.0	1.3	chr9	125233327	125233641	(13161076)	C	AluY	SINE/Alu	(0)	311	1	4174226
473	22.1	15.2	4.7	chr9	125513458	125513672	(12881045)	+	MIRb	SINE/MIR	7	245	(23)	4174817
357	25.2	5.5	1.9	chr9	125521958	125522062	(12872655)	+	MIRc	SINE/MIR	94	202	(66)	4174830
15	0.0	0.0	0.0	chr9	125542055	125542071	(12852646)	+	(TC)n	Simple_repeat	1	17	(0)	4174868
315	5.3	0.0	0.0	chr9	125675260	125675297	(12719420)	C	U2	snRNA	(150)	38	1	4175092
2405	10.6	0.3	0.0	chr9	125744346	125744646	(12650071)	C	AluSx3	SINE/Alu	(0)	311	10	4175274
218	22.7	0.0	0.0	chr9	125744807	125744850	(12649867)	C	MIR3	SINE/MIR	(0)	208	165	4175275
407	32.1	6.4	6.3	chr9	125854767	125854993	(12539724)	+	MIRb	SINE/MIR	3	230	(0)	4175435
215	37.1	4.0	10.9	chr9	125932220	125932540	(12462177)	+	L2c	LINE/L2	3090	3387	(0)	4175533
263	17.9	6.7	0.0	chr9	126985827	126985882	(11408835)	+	L2c	LINE/L2	3327	3386	(1)	4177448
1254	14.7	0.0	0.0	chr9	127388164	127388333	(11006384)	+	AluJb	SINE/Alu	131	300	(12)	4178115
19	14.9	0.0	0.0	chr9	127424461	127424497	(10970220)	+	(GTTGCCA)n	Simple_repeat	1	37	(0)	4178181
1150	21.0	9.5	0.4	chr9	127446349	127446605	(10948112)	C	AluJr4	SINE/Alu	(26)	286	4	4178227
7998	7.1	0.6	1.8	chr9	128181336	128182354	(10212363)	+	LTR13	LTR/ERVK	1	1007	(0)	4179912
13	25.1	3.9	4.9	chr9	128552302	128552379	(9842338)	+	(CCCTCGC)n	Simple_repeat	1	81	(0)	4180816
12	12.0	3.7	0.0	chr9	128552423	128552449	(9842268)	+	G-rich	Low_complexity	1	28	(0)	4180817
212	34.1	3.6	4.3	chr9	129139771	129139911	(9254806)	+	MIR3	SINE/MIR	1	140	(68)	4182167
14	11.6	0.0	3.3	chr9	129174722	129174751	(9219966)	+	(CTTT)n	Simple_repeat	1	30	(0)	4182240
24	11.0	4.5	5.8	chr9	129174945	129175010	(9219707)	+	G-rich	Low_complexity	1	69	(0)	4182241
16	22.6	0.0	0.0	chr9	129175064	129175096	(9219621)	+	A-rich	Low_complexity	1	33	(0)	4182242
12	31.3	0.0	0.0	chr9	129178076	129178119	(9216598)	+	(GCT)n	Simple_repeat	1	44	(0)	4182246
23	10.2	0.0	4.3	chr9	129482661	129482735	(8911982)	+	(GGAGGGG)n	Simple_repeat	1	71	(0)	4182935
23	29.0	2.8	7.2	chr9	129497006	129497181	(8897536)	+	GA-rich	Low_complexity	1	181	(0)	4182973
23	3.7	0.0	0.0	chr9	129910848	129910875	(8483842)	+	(TG)n	Simple_repeat	1	28	(0)	4183882
34	8.7	0.0	0.0	chr9	130579630	130579678	(7815039)	+	(GCG)n	Simple_repeat	1	49	(0)	4185377
222	27.3	0.0	0.0	chr9	131678998	131679052	(6715665)	+	L3b	LINE/CR1	4830	4884	(348)	4187470
365	26.4	10.3	0.0	chr9	132042356	132042495	(6352222)	C	MIR	SINE/MIR	(105)	157	2	4188113
3410	13.5	11.0	1.1	chr9	132093963	132094672	(6300045)	C	L1MB7	LINE/L1	(0)	6184	5404	4188209
986	24.3	5.5	2.0	chr9	132094675	132094922	(6299795)	C	Ricksha_c	DNA/MULE-MuDR	(1145)	903	647	4188210
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
645	25.7	3.7	3.7	chr9	132647333	132647522	(5747195)	+	MER103C	DNA/hAT-Charlie	67	256	(41)	4189254
1804	15.1	1.4	0.3	chr9	133714497	133714781	(4679936)	+	AluJo	SINE/Alu	1	288	(24)	4190986
1656	25.6	3.9	0.4	chr9	133875764	133876260	(4518457)	+	MLT2B1	LTR/ERVL	6	520	(0)	4191197
289	25.0	4.2	0.0	chr9	134361220	134361287	(4033430)	C	MIR3	SINE/MIR	(21)	187	117	4191936
811	27.8	4.8	0.0	chr9	134670085	134670361	(3724356)	C	L1ME4a	LINE/L1	(265)	5859	5569	4192319
292	32.6	14.0	0.0	chr9	136568086	136568392	(1826325)	+	L1MB5	LINE/L1	5818	6174	(0)	4194500
8228	5.6	1.2	0.3	chr9	137261687	137262684	(1132033)	C	LTR13	LTR/ERVK	(0)	1007	1	4195409
46	16.7	2.1	0.0	chr9	137411682	137411775	(982942)	+	G-rich	Low_complexity	1	96	(0)	4195605
27	3.5	0.0	0.0	chr9	137618904	137618933	(775784)	+	(GCGCAG)n	Simple_repeat	1	30	(0)	4195881
309	25.7	0.0	0.0	chrX	1679259	1679328	(154361567)	C	MER4D0	LTR/ERV1	(414)	458	389	4361548
2220	15.2	0.8	0.8	chrX	1679329	1679692	(154361203)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4361550
1308	6.5	4.7	6.1	chrX	1727337	1727550	(154313345)	C	MER4E1	LTR/ERV1	(570)	211	1	4361662
359	26.3	0.0	0.0	chrX	1727614	1727708	(154313187)	+	LTR16A1	LTR/ERVL	61	155	(301)	4361663
940	12.0	0.8	0.0	chrX	1728028	1728182	(154312713)	C	AluSx3	SINE/Alu	(0)	311	156	4361664
280	20.6	0.0	0.0	chrX	2253204	2253266	(153787629)	+	AluSx	SINE/Alu	205	267	(35)	4362484
277	21.9	0.0	0.0	chrX	2253246	2253309	(153787586)	+	Alu	SINE/Alu	197	260	(42)	4362490
334	17.2	0.0	0.0	chrX	2253352	2253409	(153787486)	+	AluSq	SINE/Alu	203	260	(53)	4362491
350	17.2	0.0	0.0	chrX	2253452	2253509	(153787386)	+	AluSq	SINE/Alu	203	260	(53)	4362492
348	18.6	3.8	8.9	chrX	2253496	2253607	(153787288)	+	Alu	SINE/Alu	197	302	(0)	4362493
2101	11.4	0.0	0.0	chrX	2351748	2352019	(153688876)	C	AluSx1	SINE/Alu	(40)	272	1	4362688
1014	25.1	8.7	1.2	chrX	2677774	2678103	(153362792)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	185	4363358
288	32.3	0.0	0.3	chrX	2895067	2895163	(153145732)	+	MIR	SINE/MIR	170	265	(3)	4363787
2074	16.1	0.3	0.0	chrX	2895354	2895664	(153145231)	+	AluJb	SINE/Alu	1	312	(0)	4363788
2387	9.9	0.0	0.3	chrX	2929513	2929825	(153111070)	+	AluSx	SINE/Alu	1	312	(0)	4363868
2572	5.4	0.0	0.0	chrX	3815242	3815539	(152225356)	+	AluY	SINE/Alu	1	298	(13)	4365655
2224	16.7	0.9	6.5	chrX	9662296	9662710	(146378185)	+	L1MB3	LINE/L1	5730	6138	(45)	4375139
859	21.7	10.5	3.1	chrX	10001610	10001837	(146039058)	C	L1M5	LINE/L1	(383)	5741	5495	4375770
1003	18.4	8.6	7.9	chrX	11953482	11953759	(144087136)	C	MER92B	LTR/ERV1	(0)	636	357	4378814
1103	18.1	2.2	2.6	chrX	11953793	11954024	(144086871)	C	MER92B	LTR/ERV1	(372)	264	34	4378814
383	32.4	10.4	0.6	chrX	13287041	13287214	(142753681)	C	LTR85b	LTR/Gypsy?	(508)	276	84	4380940
46	2.3	0.0	0.0	chrX	13287252	13287295	(142753600)	+	(AC)n	Simple_repeat	1	44	(0)	4380941
1263	20.7	12.7	5.7	chrX	13287593	13287805	(142753090)	C	MER39	LTR/ERV1	(26)	681	404	4380943
2731	13.5	4.9	1.8	chrX	13287806	13288257	(142752638)	+	LTR24	LTR/ERV1	1	467	(0)	4380944
6573	15.9	4.5	2.7	chrX	13300593	13303235	(142737660)	C	L1MC2	LINE/L1	(2688)	3876	1177	4380967
2740	8.6	0.3	1.1	chrX	13303239	13303604	(142737291)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	4380968
1225	16.9	22.6	2.4	chrX	13652247	13652619	(142388276)	+	MER90	LTR/ERV1	3	451	(163)	4381547
230	31.7	13.0	1.6	chrX	14027661	14027782	(142013113)	C	MamSINE1	SINE/tRNA-RTE	(4)	286	149	4382164
576	25.0	5.6	0.6	chrX	14029401	14029569	(142011326)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	4382165
791	28.9	6.4	3.3	chrX	16771508	16771808	(139269087)	+	AluJb	SINE/Alu	2	312	(0)	4386663
2181	16.0	0.0	1.0	chrX	17412314	17412625	(138628270)	+	AluJb	SINE/Alu	2	310	(2)	4387802
1003	21.7	5.3	0.0	chrX	17412820	17413017	(138627878)	C	MER58A	DNA/hAT-Charlie	(15)	209	1	4387803
906	19.7	5.8	3.8	chrX	17441907	17442091	(138598804)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	4387859
1413	24.8	7.6	0.6	chrX	17442150	17442502	(138598393)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	69	4387860
27	0.0	0.0	0.0	chrX	17737423	17737448	(138303447)	+	(C)n	Simple_repeat	1	26	(0)	4388319
4472	16.0	0.8	2.8	chrX	19710064	19710782	(136330113)	+	MER44D	DNA/TcMar-Tigger	1	705	(0)	4391815
889	24.2	4.2	0.4	chrX	21943828	21944059	(134096836)	C	Charlie13b	DNA/hAT-Charlie	(22)	490	250	4395209
625	21.7	6.9	4.7	chrX	22999670	22999838	(133041057)	+	MER96	DNA/hAT-Tip100	3	175	(0)	4396854
11	32.6	0.0	7.3	chrX	23667578	23667673	(132373222)	+	(CGCTGC)n	Simple_repeat	1	96	(0)	4397766
16	0.0	0.0	0.0	chrX	24054531	24054548	(131986347)	+	(A)n	Simple_repeat	1	18	(0)	4398696
578	30.4	7.2	0.5	chrX	29652692	29652886	(126388009)	+	MLT1H	LTR/ERVL-MaLR	338	546	(3)	4407087
7045	15.0	2.0	0.9	chrX	29660241	29661438	(126379457)	C	L1MA4	LINE/L1	(895)	5248	4031	4407097
1180	32.5	6.6	2.7	chrX	29661673	29662595	(126378300)	+	L2a	LINE/L2	2473	3426	(0)	4407102
968	28.9	7.8	1.9	chrX	30282875	30283579	(125757316)	C	Helitron1Nb_Mam	RC/Helitron	(206)	910	28	4407966
679	32.1	7.2	3.6	chrX	30283643	30284082	(125756813)	+	MamGypLTR1a	LTR/Gypsy	48	504	(280)	4407967
17	4.3	0.0	0.0	chrX	30889257	30889280	(125151615)	+	(GCC)n	Simple_repeat	1	24	(0)	4408915
13	21.4	4.7	0.0	chrX	30889273	30889315	(125151580)	+	(CCTC)n	Simple_repeat	1	45	(0)	4408916
222	28.9	1.2	5.7	chrX	39908303	39908390	(116132505)	+	MIR	SINE/MIR	109	192	(70)	4421415
34	12.3	0.0	0.0	chrX	41085363	41085417	(114955478)	+	(CGC)n	Simple_repeat	1	55	(0)	4423643
15	17.6	0.0	0.0	chrX	41085757	41085788	(114955107)	+	GA-rich	Low_complexity	1	32	(0)	4423644
12	16.9	2.9	2.8	chrX	41085870	41085904	(114954991)	+	GA-rich	Low_complexity	1	36	(0)	4423645
20	13.7	0.0	0.0	chrX	41333712	41333743	(114707152)	+	(A)n	Simple_repeat	1	32	(0)	4424166
29	20.5	1.5	0.0	chrX	44873335	44873401	(111167494)	+	(GCC)n	Simple_repeat	1	68	(0)	4429939
577	28.9	5.0	0.0	chrX	45344594	45344783	(110696112)	C	Charlie16a	DNA/hAT-Charlie	(139)	203	4	4430676
466	32.3	12.9	3.2	chrX	45446278	45446715	(110594180)	C	L2c	LINE/L2	(2)	3373	2910	4430799
3939	24.2	6.4	7.1	chrX	45472363	45473629	(110567266)	C	L1MEc	LINE/L1	(2573)	3746	2491	4430819
257	31.2	17.6	5.1	chrX	45479738	45480132	(110560763)	C	L2c	LINE/L2	(7)	3380	2926	4430828
271	33.0	11.7	0.0	chrX	45517777	45517882	(110523013)	+	MIRc	SINE/MIR	7	126	(142)	4430875
16	22.6	0.0	0.0	chrX	45697967	45697999	(110342896)	+	(AC)n	Simple_repeat	1	33	(0)	4431086
281	26.5	0.0	5.6	chrX	45711628	45711699	(110329196)	C	L2c	LINE/L2	(22)	3365	3298	4431111
1639	20.3	6.9	0.8	chrX	45741413	45741795	(110299100)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4431156
3823	23.7	10.6	14.3	chrX	45741796	45742323	(110298572)	+	MLT1A1-int	LTR/ERVL-MaLR	1	528	(1207)	4431156
3823	23.7	10.6	14.3	chrX	45743006	45743929	(110296966)	+	MLT1A1-int	LTR/ERVL-MaLR	748	1730	(5)	4431156
581	30.8	12.9	4.8	chrX	45747824	45748198	(110292697)	C	L2a	LINE/L2	(9)	3417	3008	4431167
289	37.3	4.1	0.7	chrX	45751984	45752126	(110288769)	+	L2b	LINE/L2	3228	3375	(0)	4431170
20	7.0	3.3	0.0	chrX	45752174	45752209	(110288686)	+	(AC)n	Simple_repeat	1	37	(0)	4431171
2559	6.1	0.0	0.0	chrX	47128768	47129077	(108911818)	+	AluSx1	SINE/Alu	1	310	(2)	4433431
18	18.3	0.0	0.0	chrX	47233068	47233104	(108807791)	+	(GCG)n	Simple_repeat	1	37	(0)	4433638
501	32.3	3.0	3.4	chrX	47658370	47658606	(108382289)	C	MIR	SINE/MIR	(11)	251	16	4434608
41	0.0	0.0	0.0	chrX	48631673	48631709	(107409186)	+	(CTG)n	Simple_repeat	1	37	(0)	4436505
12	22.5	2.3	2.3	chrX	48696872	48696914	(107343981)	+	(GGCCCCG)n	Simple_repeat	1	44	(0)	4436656
2458	8.1	0.3	0.0	chrX	49123933	49124241	(106916654)	C	AluSc8	SINE/Alu	(0)	311	2	4437547
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
18	4.7	0.0	0.0	chrX	54530146	54530167	(101510728)	+	(C)n	Simple_repeat	1	22	(0)	4446015
1743	25.2	8.1	1.1	chrX	57594871	57595528	(98445367)	C	L1MC5	LINE/L1	(55)	9249	8542	4449191
437	30.7	7.3	3.4	chrX	66635666	66635874	(89405021)	+	MIRc	SINE/MIR	6	223	(45)	4453887
12	25.6	2.4	0.0	chrX	71068325	71068366	(84972529)	+	G-rich	Low_complexity	1	43	(0)	4460743
17	5.3	12.5	0.0	chrX	71068423	71068462	(84972433)	+	(GCAC)n	Simple_repeat	1	45	(0)	4460744
605	23.6	14.0	2.9	chrX	77443091	77443299	(78597596)	C	MIR	SINE/MIR	(25)	237	2	4468322
22	37.1	1.5	1.4	chrX	93673381	93673517	(62367378)	+	(GGCGGA)n	Simple_repeat	1	139	(0)	4485919
186	21.0	6.1	1.6	chrX	102765899	102765961	(53274934)	+	MIR1_Amn	SINE/MIR	57	122	(108)	4497619
860	18.3	13.2	0.9	chrX	103531165	103531396	(52509499)	+	L1MD3	LINE/L1	7408	7672	(323)	4498764
2884	22.3	0.5	6.0	chrX	103656639	103657066	(52383829)	C	MER66-int	LTR/ERV1	(3691)	2985	2594	4498945
21	13.9	0.0	0.0	chrX	103687084	103687116	(52353779)	+	(T)n	Simple_repeat	1	33	(0)	4498992
1280	22.1	16.5	8.3	chrX	113512404	113513016	(42527879)	C	L1ME5	LINE/L1	(3)	6191	5519	4512863
490	28.2	0.0	8.9	chrX	113513023	113513236	(42527659)	C	MER58C	DNA/hAT-Charlie	(1)	214	20	4512864
229	30.9	14.8	3.9	chrX	118520411	118520565	(37520330)	C	MamRTE1	LINE/RTE-BovB	(338)	3474	3300	4519404
241	20.8	0.0	0.0	chrX	120550291	120550343	(35490552)	+	L1ME4b	LINE/L1	832	884	(8)	4523146
13	18.2	0.0	0.0	chrX	120561247	120561277	(35479618)	+	(CGCTCC)n	Simple_repeat	1	31	(0)	4523168
11	30.8	1.5	4.4	chrX	120561438	120561504	(35479391)	+	G-rich	Low_complexity	1	68	(0)	4523169
38	0.0	0.0	0.0	chrX	123765232	123765266	(32275629)	+	(CCG)n	Simple_repeat	1	35	(0)	4527273
316	31.7	6.0	3.8	chrX	124256478	124256608	(31784287)	+	MamTip2	DNA/hAT-Tip100	3	136	(169)	4528362
15	29.8	0.0	0.0	chrX	129523567	129523608	(26517287)	+	(CC)n	Simple_repeat	1	42	(0)	4534805
1228	27.6	4.7	2.6	chrX	130770489	130771022	(25269873)	+	L1ME3G	LINE/L1	1	507	(417)	4537061
218	31.8	1.2	5.6	chrX	131589298	131589387	(24451508)	C	L3	LINE/CR1	(3)	4096	4011	4538213
13	8.6	10.5	0.0	chrX	131705211	131705227	(24335668)	+	(CTTTTG)n	Simple_repeat	1	20	(0)	4538368
2445	10.7	0.3	0.0	chrX	131705228	131705536	(24335359)	C	AluSx	SINE/Alu	(2)	310	1	4538369
3356	15.3	6.7	1.7	chrX	131728065	131728657	(24312238)	+	MER51A	LTR/ERV1	1	625	(9)	4538397
12	22.7	0.0	0.0	chrX	131753494	131753506	(24287389)	+	A-rich	Low_complexity	1	13	(0)	4538438
2543	7.3	2.9	0.0	chrX	131753507	131753831	(24287064)	+	AluSp	SINE/Alu	1	313	(0)	4538439
12	4.7	4.5	0.0	chrX	131768703	131768724	(24272171)	+	(AAAC)n	Simple_repeat	1	23	(0)	4538461
56	0.0	0.0	0.0	chrX	134541537	134541584	(21499311)	+	(CA)n	Simple_repeat	1	48	(0)	4542919
588	26.9	11.0	0.7	chrX	134541592	134541868	(21499027)	C	L1ME4c	LINE/L1	(40)	790	482	4542920
312	36.2	8.2	0.1	chrX	134603927	134604098	(21436797)	C	MIR3	SINE/MIR	(21)	187	2	4543031
232	28.1	0.0	0.0	chrX	134604500	134604563	(21436332)	C	Helitron2Na_Mam	RC?/Helitron?	(74)	250	187	4543032
308	31.4	5.2	3.6	chrX	134669489	134669789	(21371106)	C	L2c	LINE/L2	(149)	3238	2933	4543154
18	21.6	2.1	0.0	chrX	135022461	135022508	(21018387)	+	(GCGCT)n	Simple_repeat	1	49	(0)	4543827
252	29.5	2.1	10.9	chrX	150200863	150201018	(5839877)	+	MER5A	DNA/hAT-Charlie	34	175	(14)	4565551
268	22.0	10.8	3.2	chrX	150201020	150201113	(5839782)	C	MIR3	SINE/MIR	(91)	117	16	4565552
315	20.6	1.6	0.0	chrX	150689094	150689156	(5351739)	+	LTR40A1	LTR/ERVL	1	64	(520)	4566309
378	27.5	14.4	8.2	chrX	150689195	150689388	(5351507)	+	LTR40A1	LTR/ERVL	181	388	(196)	4566309
352	23.1	1.8	10.7	chrX	150689386	150689454	(5351441)	C	MLT1H	LTR/ERVL-MaLR	(387)	162	104	4566310
2625	9.0	0.0	0.0	chrX	150689455	150689765	(5351130)	C	AluSx	SINE/Alu	(1)	311	1	4566311
14	14.2	3.2	0.0	chrX	150898644	150898674	(5142221)	+	GA-rich	Low_complexity	1	32	(0)	4566674
15	4.7	4.5	0.0	chrX	150898705	150898726	(5142169)	+	(GC)n	Simple_repeat	1	23	(0)	4566675
12	24.2	2.6	0.0	chrX	150983317	150983355	(5057540)	+	(GCTGC)n	Simple_repeat	1	40	(0)	4566879
62	0.0	0.0	0.0	chrX	150983399	150983453	(5057442)	+	(CCG)n	Simple_repeat	1	55	(0)	4566880
16	26.6	0.0	4.7	chrX	150983495	150983558	(5057337)	+	(CCCTC)n	Simple_repeat	1	64	(0)	4566881
846	28.6	6.2	2.9	chrX	151870336	151870709	(4170186)	C	L2b	LINE/L2	(621)	2798	2412	4568217
309	37.2	9.5	4.7	chrX	151871740	151872148	(4168747)	C	L2c	LINE/L2	(54)	3321	2912	4568225
20	34.4	0.0	0.0	chrX	152733618	152733693	(3307202)	+	(ATCCCC)n	Simple_repeat	1	76	(0)	4569318
12	22.0	4.8	4.5	chrX	153928490	153928552	(2112343)	+	(CCGGCTG)n	Simple_repeat	1	66	(0)	4570954
12	25.9	1.9	3.6	chrX	154369495	154369548	(1671347)	+	(CCCCA)n	Simple_repeat	1	55	(0)	4571753
744	3.8	1.1	2.5	chrX	156029887	156030800	(10095)	+	(TTAGGG)n	Simple_repeat	1	924	(0)	4574089
55	10.5	4.3	0.0	chrX	156030801	156030893	(10002)	+	(GT)n	Simple_repeat	1	97	(0)	4574090