463	1.3	0.6	1.7	chr1	10001	10468	(248945954)	+	(TAACCC)n	Simple_repeat	1	471	(0)	1
420	28.5	10.6	1.5	chr1	905266	905461	(248050961)	+	L1MB5	LINE/L1	5451	5666	(512)	1160
893	22.5	3.3	0.0	chr1	905569	905799	(248050623)	+	L1MB5	LINE/L1	5928	6166	(8)	1160
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
2111	14.5	11.2	1.6	chr1	2624743	2625128	(246331294)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3409
2236	13.0	4.8	0.6	chr1	3975945	3976307	(244980115)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	4657
2517	11.2	10.5	0.5	chr1	6724049	6724433	(242231989)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	8759
2323	11.9	11.5	0.5	chr1	6765629	6766007	(242190415)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	8879
290	29.4	6.6	5.3	chr1	7158779	7159062	(241797360)	+	L1ME3F	LINE/L1	5941	6228	(15)	9481
222	29.8	11.4	6.3	chr1	7782319	7782647	(241173775)	+	L2b	LINE/L2	3059	3423	(3)	10307
2248	12.3	3.9	2.7	chr1	8165636	8166011	(240790411)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	11065
986	16.0	2.8	0.0	chr1	8739503	8739677	(240216745)	C	LTR41	LTR/ERVL	(588)	180	1	12155
242	29.5	16.5	0.8	chr1	8739691	8739823	(240216599)	+	L2b	LINE/L2	2532	2689	(730)	12156
2470	9.8	1.6	0.3	chr1	8839985	8840343	(240116079)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	12364
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
2110	11.4	3.9	2.8	chr1	11407710	11408069	(237548353)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	17640
2374	11.9	1.3	4.6	chr1	11580007	11580394	(237376028)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	17986
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
326	29.6	0.6	4.2	chr1	12038702	12038825	(236917597)	+	MIR	SINE/MIR	32	153	(115)	19015
2285	12.3	10.8	1.0	chr1	14656497	14656881	(234299541)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	23592
14	18.1	0.0	4.9	chr1	15427101	15427141	(233529281)	+	(CCCT)n	Simple_repeat	1	41	(0)	25226
11	20.8	0.0	2.9	chr1	15837199	15837233	(233119189)	+	A-rich	Low_complexity	1	35	(0)	26174
251	21.5	3.6	4.8	chr1	16151461	16151543	(232804879)	C	Tigger17	DNA/TcMar-Tigger	(297)	2376	2295	26795
501	28.9	9.4	0.9	chr1	16175247	16175459	(232780963)	+	MIRb	SINE/MIR	34	266	(2)	26854
1535	0.0	0.0	0.0	chr1	16514122	16514285	(232442137)	C	U1	snRNA	(1)	164	1	27677
615	4.2	0.0	0.0	chr1	16678270	16678341	(232278081)	C	tRNA-Gly-GGG	tRNA	(2)	72	1	27935
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
15	30.4	2.9	0.0	chr1	16948345	16948412	(232008010)	+	(GAGCAG)n	Simple_repeat	1	70	(0)	28329
2213	14.7	7.5	1.0	chr1	18024388	18024787	(230931635)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	30765
2724	8.6	0.5	0.0	chr1	18579267	18579639	(230376783)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	31967
2241	12.7	6.9	1.7	chr1	19791843	19792187	(229164235)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	34490
1282	15.3	5.3	0.0	chr1	21319931	21320146	(227636276)	C	MER30	DNA/hAT-Charlie	(0)	230	3	37658
353	33.3	10.2	3.8	chr1	21320235	21320418	(227636004)	+	MIRb	SINE/MIR	66	262	(6)	37659
2309	10.9	3.4	5.9	chr1	21392491	21392881	(227563541)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	37841
15649	16.1	4.9	7.2	chr1	21392882	21393020	(227563402)	+	MER41-int	LTR/ERV1	1487	1586	(4360)	37831
1250	14.3	5.8	0.0	chr1	21676178	21676373	(227280049)	C	AluJb	SINE/Alu	(20)	292	85	38443
2514	9.8	1.9	0.3	chr1	22365641	22366009	(226590413)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	39992
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
209	26.4	10.3	1.1	chr1	25501771	25501858	(223454564)	+	MIRb	SINE/MIR	46	142	(126)	47267
274	22.7	14.8	6.4	chr1	25502040	25502180	(223454242)	+	MER5A1	DNA/hAT-Charlie	8	162	(4)	47268
218	29.2	11.1	1.0	chr1	25820184	25820280	(223136142)	C	MIR1_Amn	SINE/MIR	(94)	136	29	47892
12	21.6	0.0	0.0	chr1	25863818	25863849	(223092573)	+	(GGCCAT)n	Simple_repeat	1	32	(0)	47968
286	27.4	21.9	1.8	chr1	25923425	25923591	(223032831)	C	MIRb	SINE/MIR	(8)	260	51	48116
24	11.0	9.7	2.5	chr1	26046019	26046090	(222910332)	+	(CTCCGG)n	Simple_repeat	1	79	(0)	48416
234	35.3	9.9	3.8	chr1	26321367	26321631	(222634791)	+	L2c	LINE/L2	3063	3345	(42)	49060
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
12	23.3	2.5	0.0	chr1	27575934	27575973	(221380449)	+	G-rich	Low_complexity	1	41	(0)	52050
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
181	10.0	3.2	0.0	chr1	28510632	28510661	(220445761)	C	L2a	LINE/L2	(28)	3398	3368	54384
1874	7.9	10.4	0.4	chr1	28511390	28511667	(220444755)	C	AluYj4	SINE/Alu	(1)	310	2	54386
1967	11.2	0.7	1.4	chr1	28511668	28511963	(220444459)	C	AluSz	SINE/Alu	(18)	294	1	54387
2281	5.7	4.0	2.7	chr1	28749173	28749471	(220206951)	C	AluY	SINE/Alu	(0)	311	9	55042
15	16.1	2.2	4.3	chr1	29134321	29134365	(219822057)	+	G-rich	Low_complexity	1	46	(0)	55990
212	41.5	1.9	1.9	chr1	30191060	30191216	(218765206)	C	L2	LINE/L2	(468)	2951	2795	57996
1737	17.0	2.0	2.3	chr1	31906059	31906358	(217050064)	C	AluJb	SINE/Alu	(12)	300	2	61604
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
13	19.1	4.5	2.2	chr1	32361906	32361949	(216594473)	+	G-rich	Low_complexity	1	46	(0)	62709
2312	11.8	2.4	0.8	chr1	33239442	33239816	(215716606)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	64746
17	19.0	1.9	3.8	chr1	34866050	34866101	(214090321)	+	G-rich	Low_complexity	1	53	(0)	67570
465	27.5	16.3	0.9	chr1	36398030	36398345	(212558077)	C	L2a	LINE/L2	(1)	3425	3052	70782
4235	11.6	1.7	0.2	chr1	37135542	37136173	(211820249)	C	L1MA5A	LINE/L1	(3)	6294	5653	72186
331	25.6	7.6	7.0	chr1	37136280	37136422	(211820000)	C	MIRc	SINE/MIR	(120)	148	5	72187
15	29.0	1.3	3.9	chr1	39408603	39408678	(209547744)	+	G-rich	Low_complexity	1	77	(0)	76676
17	27.4	1.3	4.0	chr1	39576661	39576736	(209379686)	+	(TTTTTC)n	Simple_repeat	1	74	(0)	76951
12	17.6	5.0	2.4	chr1	39576756	39576795	(209379627)	+	(GCG)n	Simple_repeat	1	42	(0)	76952
5060	15.0	8.7	2.5	chr1	40215746	40216199	(208740223)	+	L1M4	LINE/L1	3418	3920	(2724)	78360
2282	11.9	0.0	1.9	chr1	40216200	40216517	(208739905)	+	AluSq2	SINE/Alu	1	312	(1)	78364
2539	12.5	1.3	0.5	chr1	40584121	40584498	(208371924)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	79116
659	28.9	8.9	2.2	chr1	41003502	41003731	(207952691)	+	MIR	SINE/MIR	13	259	(3)	80032
1066	24.9	13.7	1.6	chr1	41003737	41004160	(207952262)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	1	80033
503	29.4	9.3	0.8	chr1	42963300	42963546	(205992876)	+	L2b	LINE/L2	2363	2632	(787)	83439
528	19.3	20.2	1.2	chr1	42963707	42963874	(205992548)	+	L1ME3A	LINE/L1	5836	6043	(130)	83440
983	16.9	2.4	11.4	chr1	42963892	42964164	(205992258)	+	MER96B	DNA/hAT-Tip100	170	417	(0)	83441
19	19.0	0.0	0.0	chr1	43358713	43358754	(205597668)	+	(GCCCC)n	Simple_repeat	1	42	(0)	84214
2120	10.0	0.0	2.6	chr1	43404999	43405309	(205551113)	C	AluSq2	SINE/Alu	(8)	305	3	84285
1267	32.1	13.1	2.3	chr1	43522548	43523633	(205432789)	C	L2c	LINE/L2	(154)	3233	2005	84451
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
234	23.1	1.0	11.9	chr1	45339770	45339887	(203616535)	+	L2c	LINE/L2	3059	3163	(212)	87767
21	15.8	0.0	0.0	chr1	45747098	45747133	(203209289)	+	(GC)n	Simple_repeat	1	36	(0)	88675
216	29.9	8.4	0.0	chr1	45747154	45747240	(203209182)	+	L2c	LINE/L2	3291	3385	(2)	88674
366	31.7	3.4	2.7	chr1	46522311	46522456	(202433966)	+	MIRb	SINE/MIR	73	219	(49)	90190
420	25.9	6.5	0.0	chr1	52368303	52368418	(196588004)	+	L2a	LINE/L2	3302	3425	(1)	100705
2234	12.5	5.2	1.1	chr1	54938986	54939350	(194017072)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	106192
351	31.6	3.9	2.3	chr1	58814820	58814994	(190141428)	+	MIRb	SINE/MIR	45	222	(46)	113579
2897	8.2	0.6	0.0	chr1	59514549	59514901	(189441521)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	115004
17	7.9	0.0	0.0	chr1	65147483	65147509	(183808913)	+	(GGAGT)n	Simple_repeat	1	27	(0)	125211
2684	8.5	0.6	0.0	chr1	67207422	67207774	(181748648)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	128418
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
1621	19.0	0.3	4.9	chr1	70459624	70459949	(178496473)	C	AluJo	SINE/Alu	(1)	311	1	133477
2634	10.3	1.1	0.0	chr1	90862781	90863131	(158093291)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	161873
2037	6.6	3.5	8.3	chr1	91906025	91906325	(157050097)	+	AluSc	SINE/Alu	1	286	(23)	163457
261	20.8	11.1	0.0	chr1	91906373	91906444	(157049978)	C	MLT1K	LTR/ERVL-MaLR	(478)	117	37	163456
13	23.6	1.9	3.7	chr1	108200192	108200244	(140756178)	+	G-rich	Low_complexity	1	54	(0)	186508
1381	29.5	14.8	3.3	chr1	109918041	109919101	(139037321)	C	L2c	LINE/L2	(179)	3208	2013	189278
1186	17.8	21.8	11.7	chr1	114379984	114380421	(134576001)	+	LTR36	LTR/ERV1	123	611	(0)	196475
591	22.0	3.6	3.0	chr1	120354987	120355150	(128601272)	+	U1	snRNA	1	165	(0)	205414
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
940	20.8	17.4	10.4	chr1	143720101	143720503	(105235919)	C	LTR4	LTR/ERV1	(111)	485	49	208223
608	22.2	0.0	2.3	chr1	143720514	143720642	(105235780)	C	U1	snRNA	(37)	128	3	208224
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
631	21.4	3.6	3.0	chr1	144523858	144524021	(104432401)	C	U1	snRNA	(0)	165	1	209540
1490	0.6	0.0	0.0	chr1	144560666	144560829	(104395593)	C	U1	snRNA	(1)	164	1	209628
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
1996	17.9	1.0	1.6	chr1	150749640	150749951	(98206471)	C	AluJo	SINE/Alu	(2)	310	1	219755
15	12.9	5.0	7.9	chr1	150926373	150926432	(98029990)	+	(CTTCCC)n	Simple_repeat	1	63	(0)	220139
218	32.5	4.5	6.0	chr1	151791539	151791672	(97164750)	+	L2b	LINE/L2	3241	3372	(3)	221901
4089	9.7	2.2	0.2	chr1	153343705	153344272	(95612150)	+	LTR19B	LTR/ERV1	1	580	(0)	223933
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
18	26.1	0.0	4.6	chr1	156282735	156282799	(92673623)	+	(CCG)n	Simple_repeat	1	65	(0)	229845
12	6.9	5.9	5.6	chr1	156642160	156642193	(92314229)	+	(GCAGCT)n	Simple_repeat	1	36	(0)	230513
2771	12.7	1.4	5.8	chr1	157279384	157279886	(91676536)	C	LTR21A	LTR/ERV1	(0)	481	1	231522
4948	14.1	6.5	1.9	chr1	157279887	157280696	(91675726)	C	Tigger3b	DNA/TcMar-Tigger	(295)	936	77	231518
23	21.7	2.5	3.7	chr1	160262403	160262482	(88693940)	+	(CCACCG)n	Simple_repeat	1	82	(0)	235489
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
2731	7.4	0.8	0.0	chr1	160867652	160868003	(88088419)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	236394
2485	8.4	0.0	0.0	chr1	160989613	160989920	(87966502)	C	AluSg	SINE/Alu	(1)	309	2	236638
271	10.5	0.0	0.0	chr1	160989981	160990018	(87966404)	C	L1MC4a	LINE/L1	(2397)	5485	5448	236635
2426	8.2	0.0	1.0	chr1	160990101	160990406	(87966016)	+	AluSq2	SINE/Alu	1	303	(10)	236639
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
2440	12.0	10.8	0.0	chr1	168154706	168155087	(80801335)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	247904
1856	16.2	5.9	2.5	chr1	168220434	168220794	(80735628)	C	THE1D	LTR/ERVL-MaLR	(7)	374	1	248035
1907	15.0	10.8	3.5	chr1	174204636	174205029	(74751393)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	256903
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
2082	14.2	2.7	2.1	chr1	182232992	182233364	(66723058)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	269060
2409	9.6	2.8	3.8	chr1	182292297	182292664	(66663758)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	269177
709	16.0	0.1	3.5	chr1	184454322	184454470	(64501952)	C	MER4CL34	LTR/ERV1	(3)	869	634	272677
2311	13.1	3.6	0.5	chr1	184454471	184454868	(64501554)	+	MSTA	LTR/ERVL-MaLR	1	411	(17)	272678
1990	14.9	7.7	1.8	chr1	192385876	192386217	(56570205)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	283346
8278	9.9	1.6	0.7	chr1	192977227	192978516	(55977906)	+	Charlie3	DNA/hAT-Charlie	1	1348	(1358)	284173
2495	9.2	1.7	0.0	chr1	197995621	197995969	(50960453)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	290627
2190	13.4	6.3	0.6	chr1	198355404	198355762	(50600660)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	291091
2470	8.1	0.0	0.3	chr1	201954809	201955118	(47001304)	+	AluSx3	SINE/Alu	1	309	(2)	296923
46	21.2	3.1	4.8	chr1	201955119	201955207	(47001215)	+	A-rich	Low_complexity	71	157	(0)	296924
12	20.4	0.0	0.0	chr1	204672677	204672705	(44283717)	+	(CTCC)n	Simple_repeat	1	29	(0)	302048
327	28.2	12.1	0.8	chr1	204711488	204711612	(44244810)	+	MIRb	SINE/MIR	125	265	(3)	302113
1597	17.9	13.3	3.4	chr1	206735427	206735871	(42220551)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	8	305601
1990	24.1	4.2	14.4	chr1	208489233	208489877	(40466545)	C	MER70B	LTR/ERVL	(0)	578	3	308223
2511	13.0	4.4	0.0	chr1	210076537	210076945	(38879477)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	310585
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
2874	7.7	0.8	0.0	chr1	210557493	210557844	(38398578)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	311353
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
950	17.4	1.1	0.0	chr1	212857841	212858012	(36098410)	+	MER41D	LTR/ERV1	384	557	(0)	315327
340	29.4	9.7	6.2	chr1	212860542	212860795	(36095627)	+	L2a	LINE/L2	3142	3386	(1)	315334
362	33.8	9.3	3.4	chr1	212860888	212861363	(36095059)	+	L2c	LINE/L2	2656	3161	(214)	315335
2769	11.1	3.0	0.9	chr1	220687748	220688166	(28268256)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	326588
403	29.5	5.7	5.7	chr1	220689911	220690158	(28266264)	C	L1M5	LINE/L1	(504)	5620	5373	326594
311	30.6	0.0	0.0	chr1	222709795	222709866	(26246556)	+	L2c	LINE/L2	3274	3345	(42)	329538
20	5.8	2.5	4.9	chr1	223224477	223224518	(25731904)	+	(AAAAAG)n	Simple_repeat	1	41	(0)	330416
2061	11.3	6.3	1.9	chr1	223288088	223288449	(25667973)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	330483
1841	13.6	11.0	2.4	chr1	224660105	224660436	(24295986)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	332940
1061	5.5	0.0	0.0	chr1	225911595	225911721	(23044701)	+	AluSc	SINE/Alu	2	128	(181)	334798
11460	6.2	2.9	6.2	chr1	225969587	225971218	(22985204)	+	LTR12C	LTR/ERV1	3	1579	(0)	334922
717	24.6	16.5	1.2	chr1	226111078	226111487	(22844935)	C	LTR82B	LTR/ERVL	(271)	559	21	335235
255	34.0	4.8	0.0	chr1	226985795	226985894	(21970528)	+	MIRc	SINE/MIR	38	142	(126)	336773
2032	14.4	13.0	0.5	chr1	227387219	227387588	(21568834)	C	MSTA	LTR/ERVL-MaLR	(5)	423	1	337428
2266	10.9	0.0	0.0	chr1	227396318	227396610	(21559812)	C	AluSz	SINE/Alu	(19)	293	1	337452
1118	28.1	10.3	6.9	chr1	227396611	227397087	(21559335)	+	L2c	LINE/L2	2307	2826	(593)	337451
2216	11.4	11.5	6.2	chr1	228127033	228127381	(20829041)	C	MSTA	LTR/ERVL-MaLR	(2)	426	57	338325
35	27.5	4.0	1.9	chr1	228378431	228378580	(20577842)	+	(CCCCT)n	Simple_repeat	1	156	(0)	338615
1849	11.7	7.9	10.5	chr1	231428422	231428773	(17527649)	C	THE1D	LTR/ERVL-MaLR	(34)	347	1	343483
2316	12.9	2.6	1.1	chr1	232229243	232229617	(16726805)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	344692
1533	26.0	7.4	3.2	chr1	233635662	233636668	(15319754)	C	L2a	LINE/L2	(0)	3426	2378	346694
2380	8.8	0.7	0.0	chr1	233792351	233792683	(15163739)	+	AluSc5	SINE/Alu	1	309	(0)	346926
2268	10.6	5.3	1.6	chr1	234695977	234696342	(14260080)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	348296
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
242	33.3	0.0	0.0	chr1	234975375	234975449	(13980973)	+	LFSINE_Vert	SINE/tRNA	2	76	(383)	348765
1953	15.8	11.2	4.0	chr1	236992419	236992814	(11963608)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	352603
2626	15.2	2.6	1.3	chr1	243105555	243106022	(5850400)	C	MER4CL34	LTR/ERV1	(0)	872	305	362086
2283	11.8	4.9	2.3	chr1	243106023	243106376	(5850046)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	362087
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
2504	12.3	2.6	4.0	chr1	245345534	245345920	(3610502)	+	MSTA	LTR/ERVL-MaLR	5	401	(27)	365899
4179	14.1	8.9	0.9	chr1	246081977	246082684	(2873738)	+	LTR8B	LTR/ERV1	1	775	(45)	366916
4019	8.8	5.1	0.0	chr1	247110624	247111180	(1845242)	+	LTR14C	LTR/ERVK	1	587	(0)	368662
608	0.0	0.0	21.5	chr1	248873855	248873961	(82461)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	370918
2301	6.4	0.0	8.8	chr10	915523	915850	(132881572)	+	AluY	SINE/Alu	1	299	(12)	372007
9560	13.9	5.8	4.0	chr10	915851	916413	(132881009)	+	LTR49-int	LTR/ERV1	4022	4602	(1729)	372001
2419	10.4	2.8	0.8	chr10	3035377	3035733	(130761689)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	374526
2028	12.3	6.0	1.1	chr10	7619499	7619860	(126177562)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	381309
2413	12.3	7.0	2.2	chr10	8160198	8160604	(125636818)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	382246
1429	16.1	3.1	4.7	chr10	11710781	11711079	(122086343)	+	L1MB2	LINE/L1	5834	6127	(44)	387381
2386	13.4	1.3	1.6	chr10	13120777	13121156	(120676266)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	390140
200	24.7	22.7	0.0	chr10	15035904	15035988	(118761434)	C	MIRb	SINE/MIR	(71)	197	88	393488
1904	12.0	12.3	2.9	chr10	16542472	16542815	(117254607)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	396026
2394	12.0	8.4	0.2	chr10	16606984	16607376	(117190046)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	396128
472	25.5	10.1	2.4	chr10	16891767	16891931	(116905491)	+	MER20	DNA/hAT-Charlie	1	179	(40)	396533
2706	18.6	2.5	0.2	chr10	17425839	17426344	(116371078)	+	LTR53	LTR/ERVL	2	519	(0)	397359
2034	15.7	7.9	0.8	chr10	17473644	17473996	(116323426)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	397449
2388	12.1	1.9	1.6	chr10	21183745	21184107	(112613315)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	403096
2278	13.1	11.0	1.0	chr10	21246868	21247252	(112550170)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	403230
1975	11.8	5.6	1.9	chr10	22217833	22218195	(111579227)	C	THE1D	LTR/ERVL-MaLR	(0)	381	5	404941
1980	13.8	15.2	0.8	chr10	23086356	23086721	(110710701)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	406248
1801	27.3	6.6	1.7	chr10	23086722	23086978	(110710444)	+	L1ME3Cz	LINE/L1	494	756	(241)	406245
13	14.0	4.7	4.4	chr10	24724937	24724979	(109072443)	+	(TCACCC)n	Simple_repeat	1	45	(0)	408957
2024	12.1	16.0	2.7	chr10	24783485	24783851	(109013571)	C	MSTA	LTR/ERVL-MaLR	(3)	425	1	409112
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
2519	13.5	10.1	0.0	chr10	29219920	29220304	(104577118)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	416523
1978	14.4	12.2	1.1	chr10	30247715	30248094	(103549328)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	418336
2223	12.7	5.6	4.5	chr10	31060642	31060842	(102736580)	+	MSTA	LTR/ERVL-MaLR	1	192	(236)	419777
2447	7.5	0.0	0.0	chr10	31060843	31061136	(102736286)	+	AluSc8	SINE/Alu	2	295	(16)	419778
2678	13.2	4.5	1.6	chr10	31972386	31972817	(101824605)	C	MER83	LTR/ERV1	(0)	448	4	421081
1768	15.0	0.7	1.1	chr10	31972818	31973097	(101824325)	C	AluJr	SINE/Alu	(33)	279	1	421082
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
2213	10.3	13.8	1.3	chr10	43599298	43599671	(90197751)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	433831
236	27.5	0.0	1.4	chr10	46550997	46551066	(87246356)	+	MamRep38	DNA/hAT	78	146	(149)	437844
3001	5.6	0.0	0.0	chr10	48186356	48186710	(85610712)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	440205
1901	14.2	5.5	4.8	chr10	49791165	49791542	(84005880)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	442325
2318	12.7	2.6	0.8	chr10	63827002	63827375	(69970047)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	462477
1594	12.6	5.4	7.0	chr10	68330857	68331158	(65466264)	C	AluJb	SINE/Alu	(15)	297	1	468966
395	29.3	8.4	0.6	chr10	68985298	68985472	(64811950)	C	L1M5	LINE/L1	(301)	5823	5634	470579
1400	18.2	0.4	0.0	chr10	68985473	68985697	(64811725)	C	AluJr	SINE/Alu	(86)	226	1	470580
234	31.6	2.5	0.0	chr10	69735001	69735079	(64062343)	C	MIR3	SINE/MIR	(52)	156	76	472165
11	21.6	0.0	4.9	chr10	71815139	71815179	(61982243)	+	(GCCGCT)n	Simple_repeat	1	41	(0)	475961
1902	14.7	12.2	1.8	chr10	72808596	72808977	(60988445)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	478080
12	9.2	0.0	4.0	chr10	73874462	73874486	(59922936)	+	(GCGG)n	Simple_repeat	1	25	(0)	480061
37	21.8	4.0	3.1	chr10	73874612	73874736	(59922686)	+	(CCCCG)n	Simple_repeat	1	130	(0)	480062
33	15.5	0.0	5.1	chr10	75043704	75043782	(58753640)	+	G-rich	Low_complexity	1	79	(0)	482306
570	25.4	8.3	7.0	chr10	75084882	75085141	(58712281)	C	MIRb	SINE/MIR	(1)	267	1	482393
1948	12.1	2.2	0.3	chr10	77904464	77904769	(55892653)	+	THE1A	LTR/ERVL-MaLR	1	312	(43)	486780
16	0.0	0.0	0.0	chr10	78029613	78029630	(55767792)	+	(T)n	Simple_repeat	1	18	(0)	487025
25	22.3	0.0	0.0	chr10	79221244	79221293	(54576129)	+	(GT)n	Simple_repeat	1	50	(0)	489281
18	20.8	4.6	2.9	chr10	79221294	79221307	(54576115)	+	(CGTG)n	Simple_repeat	2	68	(0)	489282
1826	16.5	9.3	5.1	chr10	80313482	80313890	(53483532)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	491014
2846	7.3	0.3	0.0	chr10	80344538	80344891	(53452531)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	491061
2677	8.2	0.3	1.1	chr10	85719377	85719734	(48077688)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	498487
1875	11.5	4.4	1.0	chr10	86981078	86981384	(46816038)	+	THE1C	LTR/ERVL-MaLR	1	318	(57)	500514
239	29.3	1.2	1.0	chr10	95532128	95532233	(38265189)	+	MIRb	SINE/MIR	51	156	(112)	514437
2487	10.3	4.0	1.4	chr10	97948711	97949075	(35848347)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	519065
2317	5.8	0.0	2.9	chr10	101729856	101730163	(32067259)	+	AluY	SINE/Alu	2	300	(11)	525561
2583	8.6	0.5	3.4	chr10	101730164	101730327	(32067095)	C	THE1C	LTR/ERVL-MaLR	(211)	164	1	525560
14	22.6	0.0	0.0	chr10	101779876	101779911	(32017511)	+	(ATGC)n	Simple_repeat	1	36	(0)	525668
33	8.9	0.0	2.0	chr10	102432858	102432908	(31364514)	+	(TC)n	Simple_repeat	1	51	(0)	526899
12	15.3	3.5	0.0	chr10	102642298	102642326	(31155096)	+	(CGCCC)n	Simple_repeat	1	30	(0)	527306
13	9.1	0.0	3.9	chr10	102918287	102918312	(30879110)	+	(CTCC)n	Simple_repeat	1	26	(0)	527858
2261	13.3	2.5	2.7	chr10	103504292	103504694	(30292728)	C	L1MC3	LINE/L1	(266)	7519	7118	529101
2110	12.9	11.2	1.8	chr10	107032985	107033371	(26764051)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	534671
2121	16.1	6.2	2.0	chr10	113782431	113782830	(20014592)	+	MSTA	LTR/ERVL-MaLR	1	418	(10)	544872
1986	10.9	13.3	3.8	chr10	114722148	114722491	(19074931)	C	MSTA	LTR/ERVL-MaLR	(46)	382	1	546400
13	24.1	4.8	3.1	chr10	121927973	121928034	(11869388)	+	(GCC)n	Simple_repeat	1	65	(0)	557959
18	25.7	0.0	0.0	chr10	123008737	123008784	(10788638)	+	(GCC)n	Simple_repeat	1	48	(0)	559613
16	22.2	2.1	0.0	chr10	125151888	125151934	(8645488)	+	G-rich	Low_complexity	1	48	(0)	563042
13	9.9	2.6	7.7	chr11	842875	842912	(134243710)	+	(GCG)n	Simple_repeat	1	39	(0)	574013
1967	12.6	2.1	1.2	chr11	1264402	1264730	(133821892)	C	THE1D	LTR/ERVL-MaLR	(0)	381	50	574419
1707	12.7	4.4	6.1	chr11	3069490	3069834	(132016788)	C	THE1C	LTR/ERVL-MaLR	(36)	339	1	576531
2637	9.9	0.0	0.3	chr11	3380765	3381120	(131705502)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	576931
309	31.0	2.0	4.6	chr11	3381272	3381423	(131705199)	C	MIRb	SINE/MIR	(108)	160	13	576932
304	31.3	0.8	3.8	chr11	3825940	3826072	(131260550)	+	MIR3	SINE/MIR	53	181	(27)	577785
2451	10.8	3.9	2.5	chr11	5505486	5505844	(129580778)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	580087
16	8.7	0.0	0.0	chr11	6481521	6481545	(128605077)	+	(AGC)n	Simple_repeat	1	25	(0)	581392
19	8.8	2.6	2.6	chr11	12674114	12674151	(122412471)	+	(CCGCC)n	Simple_repeat	1	39	(0)	591159
1954	13.4	7.6	4.1	chr11	12989407	12989730	(122096892)	C	THE1D	LTR/ERVL-MaLR	(39)	342	1	591626
1509	13.4	10.9	2.2	chr11	17186793	17187060	(117899562)	+	AluJb	SINE/Alu	1	294	(18)	598235
231	35.3	1.4	2.2	chr11	17187068	17187206	(117899416)	C	L2	LINE/L2	(1037)	2382	2245	598236
2856	13.2	2.8	0.5	chr11	17898805	17899221	(117187401)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	599517
19	28.6	3.5	1.1	chr11	22829842	22829927	(112256695)	+	(GCCCC)n	Simple_repeat	1	89	(0)	607508
258	27.1	8.3	2.0	chr11	32911431	32911488	(102175134)	+	Chap1_Mam	DNA/hAT-Charlie	92	152	(190)	622472
2006	12.8	5.8	1.9	chr11	32911489	32911854	(102174768)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	622473
17	26.8	3.8	2.4	chr11	34052227	34052305	(101034317)	+	(GCGCCC)n	Simple_repeat	1	82	(0)	624603
2234	13.8	3.1	2.1	chr11	35073799	35074175	(100012447)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	626213
2033	12.6	10.7	10.1	chr11	45055886	45056242	(90030380)	C	MSTA	LTR/ERVL-MaLR	(56)	372	1	641408
1128	18.0	1.3	13.9	chr11	45826485	45826829	(89259793)	+	AluSz	SINE/Alu	1	301	(11)	642863
2888	8.3	0.0	2.6	chr11	46171723	46172107	(88914515)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	643419
1566	15.5	9.0	1.8	chr11	46336575	46336852	(88749770)	C	AluJo	SINE/Alu	(12)	300	1	643797
1770	15.9	0.0	5.3	chr11	46336853	46337028	(88749594)	+	AluJo	SINE/Alu	126	290	(22)	643796
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
17	22.2	0.0	0.0	chr11	47767169	47767210	(87319412)	+	(GTCCGG)n	Simple_repeat	1	42	(0)	646695
20	12.1	0.0	0.0	chr11	47767335	47767370	(87319252)	+	(GGGCGCT)n	Simple_repeat	1	36	(0)	646696
2731	12.0	4.9	0.0	chr11	57278664	57279070	(77807552)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	653391
2124	14.3	4.1	3.6	chr11	57296233	57296594	(77790028)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	653426
17	24.7	0.0	4.2	chr11	57792416	57792463	(77294159)	+	(TG)n	Simple_repeat	1	48	(0)	654475
18	22.7	0.0	0.0	chr11	57792559	57792578	(77294044)	+	(TTTA)n	Simple_repeat	1	20	(0)	654476
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
2449	22.1	1.6	0.2	chr11	59960504	59961014	(75125608)	+	LTR53	LTR/ERVL	1	518	(1)	657716
240	29.2	0.0	1.5	chr11	60906807	60906872	(74179750)	C	MER5A	DNA/hAT-Charlie	(3)	186	122	659082
1472	12.7	5.6	0.8	chr11	61963770	61964006	(73122616)	+	AluSx3	SINE/Alu	49	297	(14)	661184
2267	10.2	0.3	0.3	chr11	62041758	62042052	(73044570)	C	AluSx1	SINE/Alu	(17)	295	1	661345
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
2046	12.0	1.7	0.7	chr11	62851138	62851429	(72235193)	+	AluSc8	SINE/Alu	1	295	(16)	662958
960	17.7	8.6	0.0	chr11	62851443	62851634	(72234988)	+	AluSx1	SINE/Alu	49	258	(54)	662959
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
2282	9.7	0.3	0.0	chr11	63582852	63583140	(71503482)	+	AluSg	SINE/Alu	2	291	(19)	663927
29	21.7	1.1	5.3	chr11	65181833	65181926	(69904696)	+	GA-rich	Low_complexity	1	95	(0)	667023
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
238	19.4	7.5	0.0	chr11	65428532	65428593	(69658029)	+	MamRep4096	DNA/hAT-Tip100	68	134	(292)	667514
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
14	10.3	3.0	2.9	chr11	65872542	65872574	(69214048)	+	(CCCGC)n	Simple_repeat	1	34	(0)	668323
321	32.7	6.7	2.9	chr11	65892042	65892189	(69194433)	C	MIRc	SINE/MIR	(77)	191	34	668361
35	24.7	2.6	5.1	chr11	66744642	66744682	(68341940)	+	(GGCGCG)n	Simple_repeat	1	64	(92)	670144
186	25.0	4.2	1.4	chr11	67081518	67081586	(68005036)	C	MIR3	SINE/MIR	(114)	94	24	670895
2233	11.1	1.7	0.6	chr11	67582666	67583019	(67503603)	+	L1PA11	LINE/L1	5807	6164	(10)	671934
2377	11.1	2.6	1.3	chr11	68244953	68245328	(66841294)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	673050
2527	6.9	0.0	0.0	chr11	72434808	72435110	(62651512)	C	AluSx1	SINE/Alu	(9)	303	1	679951
553	30.1	6.7	1.3	chr11	75140721	75140946	(59945676)	+	MIRc	SINE/MIR	2	240	(28)	685403
2428	10.3	6.9	0.6	chr11	78015024	78015364	(57071258)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	691116
2513	9.2	1.1	0.3	chr11	83206956	83207317	(51879305)	C	THE1C	LTR/ERVL-MaLR	(1)	374	10	700245
2460	9.6	10.3	1.5	chr11	86109132	86109521	(48977101)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	704939
2138	13.3	5.5	1.9	chr11	86669356	86669722	(48416900)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	705909
640	17.0	7.5	3.6	chr11	93729191	93729330	(41357292)	+	AluJb	SINE/Alu	43	188	(124)	716062
300	21.9	2.1	0.0	chr11	93729331	93729392	(41357230)	+	AluJb	SINE/Alu	220	284	(17)	716062
2504	9.5	2.0	0.0	chr11	94197212	94197559	(40889063)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	716802
45476	7.8	0.6	0.4	chr11	95934030	95938646	(39147976)	+	HERVK22-int	LTR/ERVK	1	4644	(2193)	719354
4577	28.9	10.1	3.9	chr11	108027008	108027122	(27059500)	+	L2a	LINE/L2	1814	1918	(1501)	736079
1783	11.9	10.7	3.1	chr11	108027123	108027273	(27059349)	C	AluSz6	SINE/Alu	(1)	311	134	736081
2293	12.8	0.7	0.0	chr11	108027274	108027571	(27059051)	C	AluSx1	SINE/Alu	(12)	300	1	736082
1472	24.9	8.7	17.4	chr11	116895022	116895429	(18191193)	+	L2a	LINE/L2	2880	3261	(165)	750107
13	26.6	0.0	5.1	chr11	118126705	118126763	(16959859)	+	(TACCAAG)n	Simple_repeat	1	59	(0)	752372
2631	8.2	0.3	0.3	chr11	119902727	119903080	(15183542)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	755677
202	29.1	12.7	0.0	chr11	120236895	120237004	(14849618)	+	MIR3	SINE/MIR	59	184	(24)	756196
343	32.4	7.1	5.9	chr11	121257339	121257712	(13828910)	+	L2c	LINE/L2	1839	2217	(1202)	757842
13	13.2	6.1	0.0	chr11	124673756	124673788	(10412834)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	763397
1417	15.4	4.5	3.8	chr11	134444196	134444458	(642164)	C	THE1B	LTR/ERVL-MaLR	(0)	364	100	777233
459	13.7	1.8	2.4	chr11	134444430	134444594	(642028)	C	THE1B	LTR/ERVL-MaLR	(182)	193	90	777233
453	14.1	1.1	4.2	chr11	134444566	134444661	(641961)	C	THE1B	LTR/ERVL-MaLR	(182)	193	101	777233
408	18.3	1.1	4.1	chr11	134444634	134444730	(641892)	C	THE1B	LTR/ERVL-MaLR	(182)	193	100	777233
2169	15.3	5.8	1.2	chr12	4228065	4228475	(129046834)	+	MSTB1	LTR/ERVL-MaLR	1	431	(1)	785202
1327	19.9	7.0	9.5	chr12	6263770	6264086	(127011223)	+	MLT2D	LTR/ERVL	115	414	(0)	788337
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
14	13.2	4.3	6.1	chr12	6689168	6689214	(126586095)	+	GA-rich	Low_complexity	1	49	(0)	789181
16	11.5	3.2	3.1	chr12	6770687	6770717	(126504592)	+	(CT)n	Simple_repeat	1	32	(0)	789356
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
2312	12.1	5.9	1.0	chr12	9651345	9651744	(123623565)	C	MSTA	LTR/ERVL-MaLR	(7)	421	1	794136
31	3.3	0.0	0.0	chr12	9751893	9751923	(123523386)	+	(AG)n	Simple_repeat	1	31	(0)	794271
2101	17.0	6.3	1.2	chr12	9751924	9752122	(123523187)	C	MSTA	LTR/ERVL-MaLR	(208)	220	2	794270
39	0.0	0.0	0.0	chr12	12696340	12696375	(120578934)	+	(T)n	Simple_repeat	1	36	(0)	798590
2549	13.1	3.5	0.5	chr12	25691058	25691472	(107583837)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	816831
4117	6.3	4.1	0.5	chr12	27017191	27017749	(106257560)	C	LTR19B	LTR/ERV1	(0)	580	1	818849
1114	24.0	8.8	5.1	chr12	31843362	31843692	(101431617)	+	MER92A	LTR/ERV1	1	351	(61)	826192
2072	10.4	10.7	0.6	chr12	31843693	31844029	(101431280)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	826193
263	31.2	0.0	2.1	chr12	49623056	49623150	(83652159)	+	L2a	LINE/L2	3333	3425	(1)	847519
15	13.8	0.0	2.9	chr12	50050777	50050810	(83224499)	+	(CCCCTC)n	Simple_repeat	1	34	(0)	848331
396	37.0	4.0	1.6	chr12	50084770	50085011	(83190298)	+	MIRc	SINE/MIR	18	265	(3)	848383
14	24.9	0.0	0.0	chr12	50085032	50085070	(83190239)	+	G-rich	Low_complexity	1	39	(0)	848384
14	39.0	0.0	0.0	chr12	52897509	52897585	(80377724)	+	(GGAGCC)n	Simple_repeat	1	77	(0)	853617
17	24.4	0.0	4.8	chr12	53180926	53180988	(80094321)	+	G-rich	Low_complexity	1	63	(0)	854225
1586	13.6	7.8	1.5	chr12	54287615	54287879	(78987430)	C	AluSx1	SINE/Alu	(29)	283	1	856176
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
606	5.6	0.0	0.0	chr12	56190369	56190439	(77084870)	+	tRNA-Ser-TCG	tRNA	6	76	(9)	859050
2265	10.3	0.7	0.0	chr12	56190451	56190742	(77084567)	C	AluSx	SINE/Alu	(0)	312	19	859051
2005	10.7	0.0	0.4	chr12	56464543	56464803	(76810506)	+	AluSz	SINE/Alu	41	300	(12)	859593
16	15.4	2.8	0.0	chr12	57224992	57225027	(76050282)	+	(GGCCTG)n	Simple_repeat	1	37	(0)	860874
11	34.6	2.9	0.0	chr12	57547085	57547153	(75728156)	+	G-rich	Low_complexity	1	71	(0)	861491
2085	15.8	2.5	0.0	chr12	63551426	63551780	(69723529)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	869578
24	19.3	0.0	0.0	chr12	68808591	68808643	(64466666)	+	(GGCTCGG)n	Simple_repeat	1	53	(0)	878136
2334	12.0	3.9	1.9	chr12	69424514	69424886	(63850423)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	879253
2445	10.2	13.1	1.3	chr12	89528420	89528796	(43746513)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	907170
2581	13.0	2.8	0.2	chr12	91636733	91637147	(41638162)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	910214
12	15.8	0.0	3.3	chr12	93441908	93441937	(39833372)	+	(TCTCG)n	Simple_repeat	1	30	(0)	913432
14	15.9	0.0	0.0	chr12	93441980	93442007	(39833302)	+	(GCC)n	Simple_repeat	1	28	(0)	913433
517	26.8	7.2	10.2	chr12	94082588	94082765	(39192544)	+	MER102a	DNA/hAT-Charlie	1	175	(155)	914626
2260	11.5	6.3	0.6	chr12	94082766	94083124	(39192185)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	914627
649	2.8	0.0	0.0	chr12	98503503	98503574	(34771735)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	922374
14	18.4	0.0	0.0	chr12	102120190	102120220	(31155089)	+	(GCG)n	Simple_repeat	1	31	(0)	928585
2702	8.2	0.0	0.8	chr12	103835815	103836172	(29439137)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	931382
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
2649	10.8	0.3	0.5	chr12	104412404	104412777	(28862532)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	932518
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
2370	11.8	11.0	0.5	chr12	107900660	107901042	(25374267)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	939039
531	30.3	12.4	0.0	chr12	109093736	109093953	(24181356)	+	MIRb	SINE/MIR	20	268	(0)	941726
3417	16.7	13.9	4.3	chr12	110354231	110354426	(22920883)	+	L1MC3	LINE/L1	6433	6608	(1177)	944536
1656	15.0	6.9	1.4	chr12	110354427	110354712	(22920597)	+	AluJr4	SINE/Alu	1	303	(9)	944537
2042	11.5	12.4	5.3	chr12	112606620	112606943	(20668366)	C	MSTA	LTR/ERVL-MaLR	(61)	367	1	949674
2453	8.9	1.3	0.0	chr12	113017529	113017830	(20257479)	+	AluSc	SINE/Alu	1	306	(3)	950588
1933	13.5	6.9	5.9	chr12	113017831	113017987	(20257322)	C	THE1C	LTR/ERVL-MaLR	(214)	161	1	950587
14	26.3	5.4	4.1	chr12	113462615	113462707	(19812602)	+	(CTCCCT)n	Simple_repeat	1	98	(0)	951669
298	30.4	11.1	10.2	chr12	113663369	113663768	(19611541)	+	L2a	LINE/L2	2939	3393	(33)	952164
2736	9.3	0.3	0.0	chr12	115365840	115366193	(17909116)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	955860
2110	9.9	5.5	0.9	chr12	115918707	115919021	(17356288)	C	THE1D	LTR/ERVL-MaLR	(0)	381	52	957085
336	12.1	1.7	0.0	chr12	115919029	115919086	(17356223)	+	MER5A	DNA/hAT-Charlie	131	189	(0)	957086
2157	12.6	4.1	5.9	chr12	116444352	116444722	(16830587)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	958067
151	15.3	10.9	2.3	chr12	117128129	117128637	(16146672)	+	(CTGTCAC)n	Simple_repeat	2	552	(0)	959624
2868	7.6	0.0	0.0	chr12	119934780	119935134	(13340175)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	965852
723	27.4	6.3	0.5	chr12	120116117	120116340	(13158969)	C	MIRb	SINE/MIR	(1)	267	30	966260
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
1766	14.1	17.3	4.6	chr12	121164810	121165145	(12110164)	C	MSTA	LTR/ERVL-MaLR	(33)	395	1	968737
258	29.7	9.4	10.9	chr12	122874238	122874411	(10400898)	+	MER5B	DNA/hAT-Charlie	1	171	(7)	972838
13	25.9	0.0	6.5	chr12	122992671	122992732	(10282577)	+	G-rich	Low_complexity	1	62	(0)	973110
2411	12.6	1.8	0.8	chr12	123843968	123844344	(9430965)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	975059
2279	10.9	3.2	12.6	chr12	124669291	124669711	(8605598)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	976536
39	21.6	3.4	5.2	chr12	128823828	128823975	(4451334)	+	(GCC)n	Simple_repeat	1	153	(0)	983925
2695	8.8	0.3	0.0	chr12	129109480	129109833	(4165476)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	984485
1964	13.5	6.6	2.2	chr12	130577325	130577688	(2697621)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	986872
2336	11.9	2.6	2.6	chr12	130669351	130669731	(2605578)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	987012
13	28.9	0.0	5.7	chr12	131949668	131949737	(1325572)	+	(GCCCC)n	Simple_repeat	1	70	(0)	988881
7639	6.1	2.0	0.0	chr12	132051267	132052253	(1223056)	C	LTR13	LTR/ERVK	(0)	1007	1	989020
17	12.7	0.0	0.0	chr12	132571276	132571301	(704008)	+	(CT)n	Simple_repeat	1	26	(0)	989601
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
562	25.8	11.6	0.5	chr12	132757307	132757400	(517909)	C	MER58A	DNA/hAT-Charlie	(0)	224	116	989872
1885	16.1	0.7	3.2	chr12	132757401	132757540	(517769)	+	AluJo	SINE/Alu	1	136	(176)	989898
2389	7.1	0.0	0.3	chr12	132757541	132757834	(517475)	+	AluY	SINE/Alu	1	293	(18)	989899
7938	5.2	4.3	0.2	chr12	132810348	132811313	(463996)	+	LTR13	LTR/ERVK	1	1007	(0)	989974
1826	17.6	4.8	6.0	chr13	28077149	28077244	(86287084)	C	MSTB1	LTR/ERVL-MaLR	(55)	377	289	1006063
2734	7.3	0.0	6.6	chr13	28077245	28077624	(86286704)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1006064
2914	14.0	1.2	0.9	chr13	41136616	41136829	(73227499)	+	MSTB	LTR/ERVL-MaLR	1	215	(211)	1025325
30	2.8	5.4	0.0	chr13	41136830	41136866	(73227462)	+	(TC)n	Simple_repeat	1	39	(0)	1025326
2914	14.0	1.2	0.9	chr13	41136867	41137076	(73227252)	+	MSTB	LTR/ERVL-MaLR	216	425	(1)	1025325
24	23.4	3.9	1.2	chr13	42272049	42272132	(72092196)	+	(GCG)n	Simple_repeat	1	86	(0)	1027115
387	36.1	1.9	1.9	chr13	46438315	46438523	(67925805)	+	L2	LINE/L2	2143	2351	(1068)	1033892
2170	11.7	12.3	0.8	chr13	79279824	79280195	(35084133)	+	MSTA	LTR/ERVL-MaLR	8	428	(0)	1078708
337	26.7	11.2	3.6	chr13	80650724	80650863	(33713465)	+	MLT1J-int	LTR/ERVL-MaLR	1229	1380	(7)	1080587
186	33.8	2.4	0.0	chr13	80790346	80790425	(33573903)	+	MIRc	SINE/MIR	82	163	(105)	1080736
1800	18.6	1.7	0.0	chr13	80797890	80798180	(33566148)	+	AluSz6	SINE/Alu	2	297	(15)	1080752
1902	14.6	12.1	3.1	chr13	80836207	80836589	(33527739)	C	MSTA	LTR/ERVL-MaLR	(6)	422	1	1080789
4261	26.2	10.4	4.8	chr13	80886037	80888092	(33476236)	+	L1MEc	LINE/L1	21	2205	(4195)	1080853
17	6.8	3.0	2.9	chr13	89791272	89791304	(24573024)	+	(AAAC)n	Simple_repeat	1	34	(0)	1092093
958	30.9	4.3	8.7	chr13	89847575	89848035	(24516293)	C	MLT1F2	LTR/ERVL-MaLR	(16)	544	105	1092172
230	31.8	5.7	5.0	chr13	89900968	89901106	(24463222)	+	L1M4	LINE/L1	2	141	(7376)	1092247
3747	19.0	9.0	13.9	chr13	89910201	89911229	(24453099)	C	LTR28B	LTR/ERV1	(0)	974	1	1092257
878	23.3	0.5	2.6	chr13	89957218	89957410	(24406918)	C	AluJr	SINE/Alu	(6)	306	118	1092316
1037	21.7	20.3	0.0	chr13	89957414	89957653	(24406675)	C	AluJo	SINE/Alu	(10)	302	2	1092317
1303	26.7	0.7	7.0	chr13	89995931	89996398	(24367930)	C	L1MC4	LINE/L1	(961)	7081	6644	1092375
13	15.2	2.5	4.9	chr13	89997954	89997993	(24366335)	+	(ATTTG)n	Simple_repeat	1	41	(0)	1092378
3739	17.4	8.3	5.7	chr13	90001302	90002140	(24362188)	C	MER4D	LTR/ERV1	(0)	903	41	1092381
2378	17.9	9.2	8.7	chr13	90002141	90002217	(24362111)	C	LTR8A	LTR/ERV1	(0)	727	664	1092382
3020	14.6	8.8	1.4	chr13	90002218	90002781	(24361547)	+	MER4B	LTR/ERV1	1	610	(0)	1092383
277	27.6	0.0	7.5	chr13	90003765	90003858	(24360470)	C	MIR3	SINE/MIR	(113)	95	9	1092384
1007	32.6	2.9	5.2	chr13	90068539	90069042	(24295286)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	58	1092460
349	35.2	9.6	6.2	chr13	90248482	90248802	(24115526)	C	LTR33	LTR/ERVL	(68)	447	115	1092691
2747	18.3	1.9	2.8	chr13	90388098	90388269	(23976059)	+	L1MC1	LINE/L1	5133	5308	(838)	1092863
2269	13.0	2.8	1.4	chr13	90388273	90388631	(23975697)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1092866
2360	7.1	0.0	7.4	chr13	90457297	90457632	(23906696)	+	AluY	SINE/Alu	1	311	(0)	1092953
946	30.6	12.5	1.3	chr13	90628326	90628799	(23735529)	+	LTR16E1	LTR/ERVL	3	537	(1)	1093159
9848	12.8	4.2	0.3	chr13	90643279	90644797	(23719531)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1093186
195	36.4	5.5	2.8	chr13	90769359	90769570	(23594758)	C	L2c	LINE/L2	(238)	3149	2932	1093358
1277	30.1	10.5	1.4	chr13	90806876	90807374	(23556954)	C	MLT1F2	LTR/ERVL-MaLR	(6)	554	5	1093413
1505	18.5	0.4	1.9	chr13	90916852	90917110	(23447218)	+	AluJo	SINE/Alu	32	286	(26)	1093535
14728	14.2	2.0	0.7	chr13	90963513	90965776	(23398552)	+	Tigger1	DNA/TcMar-Tigger	1	2309	(109)	1093592
11485	20.1	1.4	2.1	chr13	90976702	90978928	(23385400)	+	L1PA11	LINE/L1	7	3277	(4326)	1093606
209	33.8	0.8	10.3	chr13	90985923	90986067	(23378261)	+	L2c	LINE/L2	3020	3150	(237)	1093612
669	31.4	7.7	2.5	chr13	90993370	90993728	(23370600)	+	LTR16E1	LTR/ERVL	69	447	(91)	1093621
768	31.2	10.9	5.3	chr13	91041585	91042357	(23321971)	+	L2b	LINE/L2	2291	3106	(269)	1093690
1130	32.0	8.5	6.7	chr13	91115533	91116385	(23247943)	C	L2b	LINE/L2	(291)	3084	2213	1093801
546	27.0	3.2	4.3	chr13	91143959	91144224	(23220104)	+	LTR86A1	LTR/ERVL	150	450	(63)	1093847
207	22.8	3.4	0.0	chr13	91155820	91155876	(23208452)	+	MIRb	SINE/MIR	204	262	(6)	1093862
14	19.9	0.0	4.5	chr13	91162114	91162157	(23202171)	+	G-rich	Low_complexity	1	44	(0)	1093866
345	30.5	8.4	2.8	chr13	91201839	91201983	(23162345)	+	MIRb	SINE/MIR	2	155	(113)	1093927
465	29.4	8.7	6.8	chr13	91201978	91202225	(23162103)	+	MIRb	SINE/MIR	5	257	(11)	1093928
706	30.0	0.7	2.2	chr13	91228437	91228666	(23135662)	C	MIR	SINE/MIR	(1)	261	39	1093958
233	29.4	12.7	3.1	chr13	91241845	91242002	(23122326)	+	MIR1_Amn	SINE/MIR	3	173	(35)	1093976
2677	11.6	3.5	0.5	chr13	91303051	91303465	(23060863)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1094077
28	13.4	0.0	0.0	chr13	91393963	91394011	(22970317)	+	(TCTCC)n	Simple_repeat	1	49	(0)	1094186
1999	15.9	0.0	0.7	chr13	91394012	91394312	(22970016)	C	AluJb	SINE/Alu	(11)	301	3	1094187
4007	9.2	16.1	0.1	chr13	91425711	91426373	(22937955)	+	THE1C-int	LTR/ERVL-MaLR	3	791	(840)	1094238
1948	19.4	3.7	2.8	chr13	91426377	91426913	(22937415)	C	MLT2A2	LTR/ERVL	(8)	546	1	1094239
2027	22.8	8.1	1.7	chr13	91544708	91545239	(22819089)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	1094399
322	25.6	8.9	6.3	chr13	91674899	91675040	(22689288)	C	LTR85c	LTR/Gypsy?	(569)	254	109	1094590
1518	18.1	0.4	3.6	chr13	91688898	91689174	(22675154)	+	AluJr	SINE/Alu	21	288	(24)	1094611
1994	14.0	0.7	3.2	chr13	91724572	91724886	(22639442)	+	AluJb	SINE/Alu	6	312	(0)	1094664
2427	18.8	0.7	0.5	chr13	92329140	92329556	(22034772)	C	MSTB	LTR/ERVL-MaLR	(7)	419	2	1095429
560	32.1	8.2	13.5	chr13	92379894	92380477	(21983851)	C	LTR78B	LTR/ERV1	(659)	637	88	1095482
3561	2.1	5.7	0.0	chr13	92380494	92380921	(21983407)	+	L1PA3	LINE/L1	5702	6155	(0)	1095483
382	28.1	8.1	2.2	chr13	92514458	92514686	(21849642)	C	MIR	SINE/MIR	(6)	262	3	1095674
40	28.2	3.4	3.3	chr13	92538216	92538429	(21825899)	+	(CTTC)n	Simple_repeat	1	214	(0)	1095699
1880	26.6	9.1	2.3	chr13	92573493	92574195	(21790133)	+	LTR41B	LTR/ERVL	7	758	(0)	1095748
190	21.9	3.5	17.2	chr13	92586637	92586735	(21777593)	C	L2c	LINE/L2	(17)	3370	3286	1095764
34	8.7	0.0	1.9	chr13	92586948	92586999	(21777329)	+	(AC)n	Simple_repeat	1	52	(0)	1095765
1197	8.1	4.8	0.0	chr13	95273644	95273803	(19090525)	+	THE1B	LTR/ERVL-MaLR	1	168	(196)	1099681
957	5.0	0.0	1.7	chr13	95273804	95273922	(19090406)	C	AluYe5	SINE/Alu	(0)	310	194	1099682
1257	13.3	2.9	1.5	chr13	95273923	95274128	(19090200)	+	THE1B	LTR/ERVL-MaLR	156	364	(0)	1099681
2926	11.3	3.0	1.9	chr13	95541886	95542308	(18822020)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1100311
2394	12.3	1.8	1.8	chr13	97620977	97621357	(16742971)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1103255
2028	10.9	5.8	5.3	chr13	98787210	98787588	(15576740)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1105234
2889	7.0	1.1	1.6	chr13	99101805	99102181	(15262147)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1105696
1404	17.6	9.9	2.9	chr13	99102182	99102218	(15262110)	+	AluJr	SINE/Alu	265	294	(18)	1105695
2247	10.2	4.7	6.7	chr13	99933852	99934240	(14430088)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1107066
12	9.9	2.6	7.7	chr13	99972059	99972096	(14392232)	+	G-rich	Low_complexity	1	39	(0)	1107129
2019	25.1	12.6	3.2	chr13	111424020	111424608	(2939720)	+	Tigger17a	DNA/TcMar-Tigger	3	654	(0)	1122509
2609	22.9	6.6	8.2	chr13	113211685	113212501	(1151827)	C	L1ME1	LINE/L1	(452)	5727	4960	1124332
2640	8.8	0.8	0.0	chr13	113815415	113815766	(548562)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1125045
16	14.0	7.5	0.0	chr14	20343644	20343683	(86700035)	+	(GGC)n	Simple_repeat	1	43	(0)	1127888
330	22.6	4.1	2.1	chr14	20343795	20343889	(86699829)	C	MER46C	DNA/TcMar-Tigger	(241)	97	1	1127889
21	16.1	0.0	0.0	chr14	21384077	21384117	(85659601)	+	(T)n	Simple_repeat	1	41	(0)	1129660
294	26.4	7.8	3.6	chr14	23469077	23469186	(83574532)	C	MIR3	SINE/MIR	(49)	159	45	1132899
2236	10.4	0.0	0.3	chr14	28830133	28830430	(78213288)	C	AluY	SINE/Alu	(14)	297	1	1139768
1972	13.4	13.1	1.6	chr14	30296852	30297229	(76746489)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1141627
1884	32.5	4.7	2.9	chr14	33907548	33908371	(73135347)	C	ERVL-E-int	LTR/ERVL	(4725)	942	104	1146888
676	19.6	11.1	0.5	chr14	33908484	33908668	(73135050)	C	LTR41C	LTR/ERVL	(0)	758	552	1146889
35	21.7	3.9	6.2	chr14	34462243	34462398	(72581320)	+	(CCGC)n	Simple_repeat	1	162	(0)	1147844
13198	13.4	1.4	2.1	chr14	35925086	35925380	(71118338)	C	LTR57-int	LTR/ERVL	(2779)	2564	2282	1150870
2003	12.0	6.0	4.5	chr14	35925381	35925755	(71117963)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1150873
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
2621	10.6	1.4	0.3	chr14	55796523	55796882	(51246836)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1178338
563	21.8	13.0	1.1	chr14	57413879	57414054	(49629664)	+	MER3	DNA/hAT-Charlie	6	205	(4)	1180721
296	12.5	0.0	0.0	chr14	57414018	57414065	(49629653)	C	MER3	DNA/hAT-Charlie	(121)	88	41	1180722
460	21.6	17.1	0.0	chr14	57414132	57414233	(49629485)	+	FLAM_C	SINE/Alu	1	123	(20)	1180723
2004	13.8	5.0	1.4	chr14	57503415	57503781	(49539937)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1180864
2200	12.1	6.9	1.7	chr14	60934396	60934740	(46108978)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1185772
1680	14.9	18.5	1.4	chr14	61375448	61375801	(45667917)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1186425
2133	13.8	4.3	0.3	chr14	63783040	63783372	(43260346)	+	THE1D	LTR/ERVL-MaLR	1	347	(34)	1190043
22	6.7	0.0	0.0	chr14	64503857	64503888	(42539830)	+	(GTGC)n	Simple_repeat	1	32	(0)	1191408
1647	15.3	13.7	2.6	chr14	65340003	65340344	(41703374)	C	MSTA	LTR/ERVL-MaLR	(42)	386	1	1192964
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
619	19.0	0.8	0.0	chr14	70237670	70237785	(36805933)	C	MER34D	LTR/ERV1	(129)	450	334	1200902
2999	10.2	2.4	0.0	chr14	70237786	70238198	(36805520)	+	LTR3	LTR/ERVK	1	423	(9)	1200903
2759	9.4	0.3	0.6	chr14	74966223	74966587	(32077131)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1209484
2583	12.1	1.1	0.6	chr14	74967572	74967930	(32075788)	C	THE1B	LTR/ERVL-MaLR	(2)	362	2	1209488
31	0.0	0.0	0.0	chr14	77038790	77038816	(30004902)	+	(GT)n	Simple_repeat	1	27	(0)	1213489
17	14.7	0.0	0.0	chr14	77038817	77038840	(30004878)	+	(GC)n	Simple_repeat	1	24	(0)	1213490
12	26.8	3.8	1.8	chr14	77038933	77038985	(30004733)	+	G-rich	Low_complexity	1	55	(0)	1213491
18	7.7	0.0	0.0	chr14	81220926	81220953	(25822765)	+	(GCC)n	Simple_repeat	1	28	(0)	1220302
1896	13.5	6.3	4.0	chr14	91138517	91138847	(15904871)	C	THE1D	LTR/ERVL-MaLR	(37)	344	1	1235144
2363	12.4	2.2	0.8	chr14	91425626	91425984	(15617734)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1235673
1122	11.0	7.5	4.1	chr14	92436073	92436290	(14607428)	C	THE1D	LTR/ERVL-MaLR	(54)	327	102	1237561
532	19.1	13.1	0.8	chr14	92436292	92436418	(14607300)	+	MER58A	DNA/hAT-Charlie	40	184	(40)	1237562
432	30.6	11.8	7.2	chr14	99821936	99822280	(7221438)	+	MamRTE1	LINE/RTE-BovB	3450	3812	(0)	1250693
38	23.2	5.4	3.4	chr14	100238902	100239067	(6804651)	+	(GAGGC)n	Simple_repeat	1	175	(0)	1251501
85	25.2	3.2	3.1	chr14	100828321	100828629	(6215089)	+	(TCCTCCC)n	Simple_repeat	1	319	(0)	1252460
2095	9.8	0.7	0.3	chr14	103296805	103297100	(3746618)	C	AluSx	SINE/Alu	(6)	306	10	1256506
452	23.6	0.6	4.8	chr14	103813329	103813367	(3230351)	+	MER112	DNA/hAT-Charlie	103	141	(120)	1257549
1920	14.7	8.4	0.3	chr14	103813368	103813716	(3230002)	+	THE1D	LTR/ERVL-MaLR	2	381	(0)	1257550
2277	11.3	6.9	0.8	chr15	25856124	25856479	(76134710)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	1270609
3172	22.6	2.5	4.6	chr15	34047376	34047738	(67943451)	+	L1PA11	LINE/L1	404	772	(6209)	1282184
899	16.9	1.4	0.0	chr15	34047739	34047874	(67943315)	C	AluSx3	SINE/Alu	(0)	311	174	1282186
2111	10.7	6.5	3.4	chr15	34069962	34070319	(67920870)	C	THE1C	LTR/ERVL-MaLR	(0)	375	6	1282221
2254	11.5	4.5	3.5	chr15	34588273	34588649	(67402540)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1283072
2331	11.9	1.6	1.9	chr15	36252075	36252450	(65738739)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1285429
2252	12.3	6.0	0.8	chr15	39503180	39503540	(62487649)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1289776
12	8.9	4.2	0.0	chr15	41116515	41116538	(60874651)	+	(AGG)n	Simple_repeat	1	25	(0)	1292536
2583	10.1	1.3	1.3	chr15	42932185	42932565	(59058624)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1296043
1899	21.1	2.6	3.3	chr15	43219045	43219465	(58771724)	C	MER63B	DNA/hAT-Blackjack	(18)	418	1	1296589
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
189	21.2	12.0	0.0	chr15	44711158	44711223	(57279966)	+	MIR3	SINE/MIR	75	149	(59)	1299426
1318	15.4	1.7	0.9	chr15	44727256	44727484	(57263705)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	6	1299467
2393	14.1	1.6	0.3	chr15	44811321	44811696	(57179493)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1299603
17	26.7	0.0	0.0	chr15	50908730	50908778	(51082411)	+	(GGC)n	Simple_repeat	1	49	(0)	1308765
389	29.4	9.5	3.4	chr15	51697166	51697282	(50293907)	C	L1ME4a	LINE/L1	(158)	5966	5843	1309913
316	31.7	4.6	6.1	chr15	51697273	51697404	(50293785)	+	L1MC	LINE/L1	5583	5709	(2173)	1309915
942	21.0	3.4	0.0	chr15	51697405	51697604	(50293585)	C	MER3	DNA/hAT-Charlie	(2)	207	1	1309916
2346	10.0	0.7	0.7	chr15	52002909	52003218	(49987971)	+	AluSq2	SINE/Alu	3	312	(1)	1310502
2305	8.2	3.9	7.8	chr15	52003219	52003387	(49987802)	C	THE1D	LTR/ERVL-MaLR	(219)	162	1	1310501
1702	26.1	3.1	2.2	chr15	52003388	52003592	(49987597)	C	LTR16A	LTR/ERVL	(240)	211	1	1310500
2581	11.7	0.0	1.3	chr15	58096745	58097124	(43894065)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1319618
14	12.1	0.0	3.5	chr15	63833955	63833983	(38157206)	+	(GGC)n	Simple_repeat	1	29	(0)	1329210
959	16.1	7.9	0.0	chr15	65212343	65212516	(36778673)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1332127
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
2000	10.5	0.4	0.0	chr15	66499743	66500000	(35491189)	+	AluSq2	SINE/Alu	2	260	(53)	1334820
2646	8.0	0.3	0.0	chr15	66581971	66582322	(35408867)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	1334996
3165	10.7	6.3	2.0	chr15	68984157	68984654	(33006535)	+	HERV1_LTRa	LTR/ERV1	1	521	(0)	1339399
2214	15.2	6.5	0.0	chr15	73485419	73485818	(28505371)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1347218
282	34.2	15.6	1.2	chr15	74389383	74389628	(27601561)	C	L2a	LINE/L2	(85)	3341	3054	1348752
196	19.1	2.1	2.1	chr15	74614990	74615037	(27376152)	+	MIRc	SINE/MIR	122	169	(99)	1349183
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
3945	13.8	9.0	4.3	chr15	75065784	75066524	(26924665)	C	LTR19C	LTR/ERV1	(0)	779	1	1350108
2105	12.8	6.1	1.1	chr15	75332074	75332429	(26658760)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1350586
428	32.9	2.8	2.8	chr15	75346838	75347068	(26644121)	+	L2b	LINE/L2	2866	3093	(282)	1350628
2254	10.4	8.9	3.1	chr15	75754853	75755210	(26235979)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1351465
2501	14.4	5.4	0.0	chr15	77803521	77803923	(24187266)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1354700
2173	15.9	1.3	2.9	chr15	77858975	77859355	(24131834)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1354804
2203	11.9	5.9	1.9	chr15	78747679	78748038	(23243151)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1356517
15	12.7	6.4	4.0	chr15	81000953	81000999	(20990190)	+	(CGGCGG)n	Simple_repeat	1	50	(0)	1360519
2744	19.9	4.6	1.9	chr15	82093782	82094459	(19896730)	+	Tigger7	DNA/TcMar-Tigger	2	705	(0)	1362343
14	18.2	0.0	0.0	chr15	84981965	84982000	(17009189)	+	(CCG)n	Simple_repeat	1	36	(0)	1367058
2811	9.0	0.3	0.0	chr15	87703697	87704050	(14287139)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1371208
2583	10.0	2.7	0.8	chr15	90239341	90239704	(11751485)	C	THE1C	LTR/ERVL-MaLR	(3)	372	2	1375956
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
2399	8.9	5.3	1.1	chr15	92015232	92015594	(9975595)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	1379231
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
2285	12.4	4.7	2.4	chr15	101807254	101807625	(183564)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1393297
10224	6.3	11.7	0.5	chr16	1957337	1958737	(88379608)	C	LTR12C	LTR/ERV1	(0)	1579	2	1396714
274	34.4	8.6	0.8	chr16	1960842	1960970	(88377375)	+	MIRb	SINE/MIR	120	259	(9)	1396719
19	20.9	0.0	0.0	chr16	2019943	2019986	(88318359)	+	(GCT)n	Simple_repeat	1	44	(0)	1396802
15	16.3	0.0	2.8	chr16	2022852	2022887	(88315458)	+	(CCCCTC)n	Simple_repeat	1	36	(0)	1396807
26	0.0	0.0	0.0	chr16	2520252	2520276	(87818069)	+	(GGGC)n	Simple_repeat	1	25	(0)	1397563
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
1907	11.7	5.8	8.4	chr16	4099979	4100327	(86238018)	+	THE1D	LTR/ERVL-MaLR	1	350	(31)	1400432
354	35.0	9.4	3.6	chr16	4261553	4261684	(86076661)	+	L2b	LINE/L2	3203	3355	(20)	1400781
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
2442	11.3	5.6	0.0	chr16	4433926	4434279	(85904066)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1401145
2128	9.8	0.0	4.8	chr16	4650021	4650335	(85688010)	+	AluSx1	SINE/Alu	1	300	(12)	1401609
16	17.4	4.3	2.0	chr16	4768720	4768766	(85569579)	+	(CGCCC)n	Simple_repeat	1	49	(0)	1401819
2318	13.6	2.7	0.0	chr16	8614547	8614900	(81723445)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1409427
1913	14.6	4.7	2.2	chr16	10138275	10138645	(80199700)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1412757
1433	15.2	9.2	3.0	chr16	10497170	10497435	(79840910)	+	MER54A	LTR/ERVL	30	324	(577)	1413558
1382	12.7	0.9	4.6	chr16	10497436	10497674	(79840671)	C	MER30	DNA/hAT-Charlie	(0)	230	1	1413562
330	30.4	1.0	1.0	chr16	11100618	11100720	(79237625)	+	MIRb	SINE/MIR	83	185	(83)	1414920
2589	10.0	2.6	2.4	chr16	13660878	13661257	(76677088)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1420597
3369	14.2	2.1	5.8	chr16	13779490	13780125	(76558220)	+	LTR9	LTR/ERV1	1	612	(0)	1420842
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
24	29.2	0.0	5.8	chr16	14071388	14071446	(76266899)	+	G-rich	Low_complexity	1	120	(0)	1421472
2269	13.1	3.1	0.3	chr16	15257022	15257367	(75080978)	C	THE1B	LTR/ERVL-MaLR	(8)	356	1	1423924
2276	10.3	7.9	1.1	chr16	15535725	15536078	(74802267)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	1424638
998	27.8	8.2	3.2	chr16	15536079	15536415	(74801930)	+	LTR33C	LTR/ERVL	61	422	(207)	1424637
1842	13.3	14.2	0.0	chr16	15563543	15563880	(74774465)	C	MSTA	LTR/ERVL-MaLR	(34)	394	1	1424712
2205	13.7	2.9	0.8	chr16	15574004	15574370	(74763975)	C	THE1D	LTR/ERVL-MaLR	(6)	375	1	1424745
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
2573	10.3	1.6	3.4	chr16	21116238	21116619	(69221726)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1437195
2445	11.0	11.0	0.5	chr16	21995017	21995399	(68342946)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1439071
2037	11.5	14.8	3.2	chr16	22844510	22844730	(67493615)	+	MSTA	LTR/ERVL-MaLR	2	248	(180)	1440937
26	6.3	0.0	0.0	chr16	22844731	22844764	(67493581)	+	(CTTCAC)n	Simple_repeat	1	34	(0)	1440938
319	17.4	15.8	0.0	chr16	25107357	25107425	(65230920)	C	LTR53-int	LTR/ERVL	(1853)	1476	1395	1446219
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
2225	10.0	0.7	0.7	chr16	27184796	27185104	(63153241)	C	AluSz	SINE/Alu	(3)	309	1	1450573
1777	14.0	11.9	5.5	chr16	27185105	27185324	(63153021)	C	MSTA	LTR/ERVL-MaLR	(188)	240	5	1450572
297	29.9	9.9	3.0	chr16	28091179	28091309	(62247036)	+	MIRb	SINE/MIR	19	159	(109)	1452650
1422	20.6	1.7	1.6	chr16	30096876	30097207	(60241138)	+	LTR10B2	LTR/ERV1	187	503	(0)	1457253
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
2387	6.6	0.0	1.3	chr16	30556855	30557156	(59781189)	+	AluY	SINE/Alu	1	298	(13)	1458330
1713	14.2	0.4	1.5	chr16	30557157	30557315	(59781030)	+	AluSx1	SINE/Alu	134	292	(20)	1458329
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
453	32.0	12.2	0.0	chr16	30977880	30977994	(59360351)	+	MIR	SINE/MIR	14	151	(111)	1459326
20	15.9	0.0	0.0	chr16	46831259	46831293	(43507052)	+	(GC)n	Simple_repeat	1	35	(0)	1466115
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
13	26.8	0.0	6.2	chr16	50368781	50368845	(39969500)	+	(CCCGGC)n	Simple_repeat	1	65	(0)	1472323
31	0.0	2.7	2.6	chr16	53421248	53421284	(36917061)	+	(TTAT)n	Simple_repeat	1	38	(0)	1477814
1720	10.9	1.0	0.3	chr16	53421318	53421603	(36916742)	C	LTR12D	LTR/ERV1	(966)	288	1	1477815
2532	11.3	0.0	0.0	chr16	53458602	53458956	(36879389)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1477892
2407	13.0	2.8	1.4	chr16	54257618	54257976	(36080369)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1479177
2389	11.9	11.7	1.1	chr16	54873973	54874354	(35463991)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1480324
444	32.0	23.1	4.3	chr16	56289865	56290412	(34047933)	+	L2b	LINE/L2	2708	3361	(14)	1482837
207	23.7	14.3	2.6	chr16	57682736	57682852	(32655493)	+	MIR1_Amn	SINE/MIR	2	134	(96)	1485565
641	18.3	3.8	3.2	chr16	58701024	58701072	(31637273)	C	L1ME3	LINE/L1	(394)	5768	5724	1487659
2408	7.6	6.6	4.0	chr16	58701073	58701398	(31636947)	+	THE1D	LTR/ERVL-MaLR	1	347	(34)	1487662
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
15	8.9	0.0	0.0	chr16	66934335	66934358	(23403987)	+	(GCC)n	Simple_repeat	1	24	(0)	1500709
2214	17.5	6.1	2.7	chr16	67773051	67773461	(22564884)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1502317
342	32.8	7.6	5.5	chr16	67834041	67834221	(22504124)	+	MIRb	SINE/MIR	84	268	(0)	1502444
24	17.1	0.0	0.0	chr16	67980287	67980332	(22358013)	+	(GCA)n	Simple_repeat	1	46	(0)	1502674
15	8.8	0.0	0.0	chr16	68448443	68448466	(21889879)	+	(GGC)n	Simple_repeat	1	24	(0)	1503545
23	8.6	5.8	1.8	chr16	68510477	68510491	(21827854)	+	A-rich	Low_complexity	1	17	(0)	1503658
2705	7.2	2.0	1.1	chr16	69321946	69322297	(21016048)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1505563
2355	6.9	1.9	0.0	chr16	70346334	70346636	(19991709)	+	AluSg	SINE/Alu	1	309	(1)	1507781
14	23.1	4.7	3.0	chr16	70680128	70680191	(19658154)	+	(GCGCCCC)n	Simple_repeat	1	67	(0)	1508500
2369	10.8	11.2	0.8	chr16	74791793	74792175	(15546170)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1515461
2413	8.5	0.0	1.6	chr16	75677982	75678297	(14660048)	+	AluSz	SINE/Alu	2	312	(0)	1517295
2568	17.6	2.4	7.5	chr16	75678298	75678502	(14659843)	+	MER49	LTR/ERV1	314	511	(412)	1517293
2633	11.1	0.6	2.7	chr16	77631825	77632196	(12706149)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1520180
2460	12.6	3.5	0.7	chr16	77690329	77690744	(12647601)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1520294
2367	12.2	2.9	0.8	chr16	78215273	78215645	(12122700)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1521333
15	10.0	0.0	0.0	chr16	79770262	79770283	(10568062)	+	(GT)n	Simple_repeat	1	22	(0)	1524121
1955	13.9	3.9	2.4	chr16	80487732	80488106	(9850239)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1525365
2116	13.7	1.9	2.7	chr16	80892422	80892788	(9445557)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1526073
2263	13.1	3.6	3.3	chr16	81451106	81451468	(8886877)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1527294
196	18.6	10.6	0.0	chr16	81495883	81495941	(8842404)	+	MIR3	SINE/MIR	119	184	(24)	1527393
287	37.5	1.5	0.0	chr16	85175368	85175495	(5162850)	+	MIRb	SINE/MIR	1	130	(138)	1534330
146	38.6	1.1	2.3	chr16	85382708	85383522	(4954823)	+	(CA)n	Simple_repeat	1	824	(0)	1534748
2256	13.6	3.7	2.4	chr16	85413748	85414117	(4924228)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1534786
1750	14.0	5.8	5.0	chr16	86709931	86710291	(3628054)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1537124
1170	16.9	14.7	0.0	chr16	87384639	87384881	(2953464)	+	AluJr	SINE/Alu	20	304	(8)	1538341
243	35.2	9.0	0.0	chr16	87831035	87831156	(2507189)	C	MIRc	SINE/MIR	(55)	213	80	1539158
187	34.3	13.6	1.0	chr16	88559027	88559129	(1779216)	+	MIRb	SINE/MIR	84	201	(67)	1540114
202	24.7	5.6	4.5	chr16	88559200	88559288	(1779057)	+	MER5A	DNA/hAT-Charlie	64	153	(36)	1540115
3171	19.6	7.1	3.0	chr16	88613020	88613897	(1724448)	C	L1MB8	LINE/L1	(150)	6028	5000	1540219
11	13.1	6.4	6.0	chr16	89248798	89248844	(1089501)	+	(TGCGC)n	Simple_repeat	1	50	(0)	1540982
2103	11.2	4.0	0.0	chr16	89501050	89501336	(837009)	+	AluSc8	SINE/Alu	1	299	(12)	1541375
2558	10.2	0.8	5.3	chr17	1290739	1290905	(81966536)	+	THE1C	LTR/ERVL-MaLR	1	164	(211)	1546779
1873	12.5	0.0	0.0	chr17	1290906	1291161	(81966280)	C	AluSq	SINE/Alu	(13)	300	45	1546780
1814	23.1	5.3	15.5	chr17	4206953	4207655	(79049786)	+	MLT1E2	LTR/ERVL-MaLR	1	627	(0)	1552526
23	23.2	4.5	2.1	chr17	4807086	4807219	(78450222)	+	(GCCCCG)n	Simple_repeat	1	137	(0)	1553827
2175	12.5	3.8	2.8	chr17	5619251	5619612	(77637829)	C	THE1C	LTR/ERVL-MaLR	(2)	373	8	1555472
3368	26.6	10.9	4.8	chr17	8138308	8138688	(75118753)	C	L2a	LINE/L2	(1677)	1742	1320	1560160
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
404	27.1	3.3	0.8	chr17	10791172	10791290	(72466151)	C	LTR88b	LTR/Gypsy?	(652)	185	64	1565294
4156	13.4	7.3	0.6	chr17	11908402	11909062	(71348379)	C	LTR62	LTR/ERVL	(0)	709	1	1567241
559	30.3	9.2	1.6	chr17	16313710	16314021	(66943420)	+	L4_A_Mam	LINE/RTE-X	4549	4886	(104)	1574678
1349	15.5	8.5	2.0	chr17	16441567	16441818	(66815623)	C	AluJb	SINE/Alu	(6)	306	37	1574994
12	4.8	4.5	0.0	chr17	17810015	17810036	(65447405)	+	(GCCC)n	Simple_repeat	1	23	(0)	1577390
19	17.4	5.7	4.0	chr17	19004715	19004784	(64252657)	+	(GGCGGC)n	Simple_repeat	1	74	(0)	1579595
17	22.4	6.6	2.5	chr17	21042840	21042924	(62214517)	+	(CGG)n	Simple_repeat	1	88	(0)	1583516
371	23.9	8.1	4.8	chr17	27081251	27081417	(56176024)	C	Tigger13a	DNA/TcMar-Tigger	(7)	764	592	1586164
1745	17.0	1.3	1.6	chr17	27081608	27081919	(56175522)	+	AluJo	SINE/Alu	1	311	(1)	1586166
233	19.4	5.6	0.0	chr17	27082392	27082458	(56174983)	C	Tigger13a	DNA/TcMar-Tigger	(380)	391	321	1586164
19	3.5	3.5	0.0	chr17	27082460	27082493	(56174948)	+	(TTGT)n	Simple_repeat	1	35	(0)	1586168
13	16.8	0.0	0.0	chr17	27083946	27083972	(56173469)	+	(CAG)n	Simple_repeat	1	27	(0)	1586169
2275	13.4	5.5	0.6	chr17	34471239	34471599	(48785842)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	1600444
386	25.4	0.8	3.0	chr17	34885233	34885366	(48372075)	C	hAT-N1_Mam	DNA/hAT-Tip100?	(78)	262	132	1601270
13	13.2	0.0	0.0	chr17	38702362	38702386	(44555055)	+	(CGG)n	Simple_repeat	1	25	(0)	1608405
13	10.4	6.5	0.0	chr17	38702408	38702438	(44555003)	+	G-rich	Low_complexity	1	33	(0)	1608406
19	21.9	4.2	2.7	chr17	38702481	38702552	(44554889)	+	G-rich	Low_complexity	1	75	(0)	1608406
416	30.3	8.4	0.7	chr17	38702582	38702734	(44554707)	C	MIRb	SINE/MIR	(19)	249	84	1608407
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
2354	5.5	2.0	0.7	chr17	42155250	42155542	(41101899)	C	AluSx	SINE/Alu	(15)	297	1	1615041
403	26.2	11.7	1.9	chr17	42279210	42279375	(40978066)	+	MIR	SINE/MIR	51	246	(22)	1615293
2311	8.3	0.3	4.5	chr17	42279506	42279818	(40977623)	+	AluSp	SINE/Alu	1	300	(13)	1615294
20	19.3	2.8	5.4	chr17	42670198	42670269	(40587172)	+	G-rich	Low_complexity	1	74	(0)	1616123
27	14.6	1.9	0.0	chr17	42678337	42678389	(40579052)	+	G-rich	Low_complexity	1	54	(0)	1616134
312	29.9	4.9	5.4	chr17	44246031	44246214	(39011227)	C	L1ME4c	LINE/L1	(246)	584	402	1619532
339	23.8	16.2	2.1	chr17	44266426	44266611	(38990830)	+	MIRb	SINE/MIR	7	219	(49)	1619566
2320	12.1	4.7	1.1	chr17	44745347	44745713	(38511728)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1620641
249	34.5	5.6	1.8	chr17	45345630	45345800	(37911641)	C	MamRep434	DNA/TcMar-Tigger	(99)	327	150	1621862
16	20.9	1.1	10.1	chr17	48625316	48625427	(34632014)	+	(CCGGCCC)n	Simple_repeat	1	101	(0)	1628155
2439	6.0	1.3	0.0	chr17	48634188	48634487	(34622954)	C	AluSx3	SINE/Alu	(7)	304	1	1628163
752	6.1	3.0	0.0	chr17	49036352	49036449	(34220992)	+	U6	snRNA	1	101	(6)	1629086
1881	12.9	11.0	13.6	chr17	49088140	49088580	(34168861)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1629191
14	12.7	0.0	0.0	chr17	50208846	50208871	(33048570)	+	(GACA)n	Simple_repeat	1	26	(0)	1631316
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
2368	11.1	11.4	0.5	chr17	51536724	51537104	(31720337)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1633967
23	19.4	3.6	0.0	chr17	54861112	54861172	(28396269)	+	(TACATA)n	Simple_repeat	1	63	(0)	1638661
490	31.4	7.0	4.2	chr17	55451186	55451680	(27805761)	+	L2b	LINE/L2	2849	3375	(0)	1639667
14	31.4	2.1	4.2	chr17	57085116	57085208	(26172233)	+	G-rich	Low_complexity	1	95	(0)	1642628
2207	10.2	4.2	6.0	chr17	57151880	57152265	(26105176)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	1642757
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
339	18.9	6.4	7.4	chr17	58666384	58666478	(24590963)	+	AluYj4	SINE/Alu	208	301	(10)	1645473
856	18.6	2.4	0.6	chr17	58666536	58666697	(24590744)	C	U1	snRNA	(0)	165	1	1645474
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
13	19.1	0.0	0.0	chr17	59106906	59106935	(24150506)	+	G-rich	Low_complexity	1	30	(0)	1646445
5602	9.5	3.5	2.8	chr17	59290107	59290917	(23966524)	C	LTR5_Hs	LTR/ERVK	(151)	817	1	1646915
2020	11.9	6.9	3.8	chr17	59715235	59715601	(23541840)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	1647785
3536	17.7	6.6	1.7	chr17	61427248	61427938	(21829503)	+	L1MC3	LINE/L1	6920	7649	(136)	1651051
2262	12.1	9.2	0.3	chr17	61427939	61428285	(21829156)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1651052
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
2029	9.7	7.0	0.0	chr17	63848520	63848797	(19408644)	+	AluSx	SINE/Alu	1	299	(13)	1655457
12	22.6	1.9	5.7	chr17	63848843	63848894	(19408547)	+	(CCAG)n	Simple_repeat	1	53	(0)	1655458
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
2805	10.4	0.0	0.0	chr17	65116565	65116939	(18140502)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1658005
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
2209	12.2	3.0	2.0	chr17	68826851	68827208	(14430233)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	1664862
2609	7.6	0.3	6.1	chr17	70389281	70389528	(12867913)	+	THE1A	LTR/ERVL-MaLR	1	230	(125)	1667236
2003	10.3	0.0	3.1	chr17	70389529	70389818	(12867623)	+	AluSq	SINE/Alu	22	302	(11)	1667237
2984	6.7	0.8	0.5	chr17	73176309	73176682	(10080759)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1671792
2212	13.3	6.6	0.8	chr17	74129786	74130142	(9127299)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	1673545
2314	12.5	0.0	0.0	chr17	74714840	74715152	(8542289)	+	AluSq2	SINE/Alu	1	313	(0)	1674694
2717	5.5	0.0	0.0	chr17	75030177	75030520	(8226921)	+	LTR14A	LTR/ERVK	1	344	(0)	1675199
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
12	6.2	4.9	9.3	chr17	75878098	75878138	(7379303)	+	(AGGC)n	Simple_repeat	1	43	(0)	1676937
1106	20.3	5.8	0.4	chr17	76510878	76511139	(6746302)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	284	1678174
695	22.2	1.8	0.0	chr17	76511164	76511330	(6746111)	+	MER45R	DNA/hAT-Tip100	1	170	(1411)	1678175
1896	13.7	6.0	1.9	chr17	77694083	77694447	(5562994)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1680480
32	23.3	0.9	4.5	chr17	78231915	78232023	(5025418)	+	(CGCCCCC)n	Simple_repeat	1	110	(0)	1681461
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
1656	20.8	11.4	5.3	chr17	78665990	78666456	(4590985)	+	LTR44	LTR/ERV1	1	499	(20)	1682247
1883	11.8	8.3	0.3	chr17	79231862	79232184	(4025257)	C	THE1D	LTR/ERVL-MaLR	(0)	381	31	1683158
1608	27.3	1.8	2.9	chr17	79232189	79232701	(4024740)	+	L1ME1	LINE/L1	4725	5231	(1088)	1683157
2259	13.7	11.4	2.3	chr17	79704608	79704995	(3552446)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1683784
2310	14.3	8.0	0.5	chr17	81013672	81014065	(2243376)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1685780
364	30.0	7.4	7.0	chr17	82461940	82462154	(795287)	+	MIRb	SINE/MIR	2	217	(51)	1687674
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
2742	9.4	0.3	0.8	chr18	308124	308488	(80064797)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	1689580
2079	13.8	4.7	3.3	chr18	870906	871264	(79502021)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1690652
2736	29.8	2.7	2.8	chr18	3296459	3297771	(77075514)	+	L1PB3	LINE/L1	3	1313	(5550)	1694111
2287	15.7	4.2	0.7	chr18	8694808	8695218	(71678067)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1701791
746	23.7	0.8	2.1	chr18	8726309	8726496	(71646789)	C	MLT1A	LTR/ERVL-MaLR	(49)	325	175	1701851
20	27.6	0.0	0.0	chr18	8726497	8726548	(71646737)	+	(GC)n	Simple_repeat	1	52	(0)	1701852
474	18.4	0.0	1.1	chr18	8726611	8726698	(71646587)	C	MLT1A	LTR/ERVL-MaLR	(287)	87	1	1701851
2281	10.5	0.0	0.0	chr18	9432999	9433292	(70939993)	C	AluSz	SINE/Alu	(10)	302	9	1703011
2017	12.5	15.7	2.7	chr18	9433293	9433618	(70939667)	+	MSTA	LTR/ERVL-MaLR	45	428	(0)	1703010
3390	9.7	2.1	0.0	chr18	11925665	11926139	(68447146)	C	LTR19A	LTR/ERV1	(1)	485	1	1706590
2758	8.2	0.0	0.6	chr18	13035270	13035626	(67337659)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1708573
2246	11.4	11.7	0.8	chr18	21900978	21901358	(58471927)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1713492
2498	11.6	2.2	0.0	chr18	23044039	23044392	(57328893)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1715467
2671	8.2	0.6	0.0	chr18	50310125	50310477	(30062808)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1754939
2292	10.4	6.1	8.9	chr18	50517280	50517671	(29855614)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	1755265
2049	12.6	6.1	1.1	chr18	54754054	54754413	(25618872)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	1761707
20	21.3	1.6	3.1	chr18	56638607	56638669	(23734616)	+	G-rich	Low_complexity	1	64	(0)	1764412
2043	12.2	15.2	1.1	chr18	58780025	58780390	(21592895)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	1767837
23	20.3	7.6	0.0	chr18	62187169	62187247	(18186038)	+	G-rich	Low_complexity	1	85	(0)	1773094
12	28.8	0.0	0.0	chr18	62187299	62187340	(18185945)	+	(GCTGCA)n	Simple_repeat	1	42	(0)	1773095
2273	12.4	5.6	1.1	chr18	62994984	62995341	(17377944)	+	THE1D	LTR/ERVL-MaLR	1	375	(6)	1774385
1674	15.7	7.3	2.3	chr18	74066051	74066402	(6306883)	C	THE1D	LTR/ERVL-MaLR	(10)	371	1	1789416
2262	11.0	7.2	1.5	chr18	74479930	74480269	(5893016)	C	THE1B	LTR/ERVL-MaLR	(0)	364	4	1789938
1964	19.7	4.3	0.7	chr18	76431500	76431903	(3941382)	+	MSTB	LTR/ERVL-MaLR	7	425	(1)	1792129
2172	11.5	4.7	2.0	chr18	77993550	77993903	(2379382)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1794143
238	32.8	9.6	2.0	chr19	512707	512908	(58104708)	+	MLT1F1	LTR/ERVL-MaLR	26	244	(304)	1797055
277	27.3	10.5	1.5	chr19	513001	513130	(58104486)	+	MLT1F1	LTR/ERVL-MaLR	415	557	(12)	1797055
13	14.1	0.0	5.7	chr19	603975	604009	(58013607)	+	G-rich	Low_complexity	1	35	(0)	1797211
376	23.4	3.6	0.0	chr19	628465	628571	(57989045)	+	Charlie4a	DNA/hAT-Charlie	286	396	(112)	1797250
17	0.0	0.0	0.0	chr19	864043	864061	(57753555)	+	(CA)n	Simple_repeat	1	19	(0)	1797784
347	31.9	10.3	3.5	chr19	864139	864336	(57753280)	C	MIRb	SINE/MIR	(21)	247	35	1797785
816	26.4	9.9	3.4	chr19	1624596	1624853	(56992763)	+	Tigger17	DNA/TcMar-Tigger	1	285	(2388)	1799162
2405	10.2	3.0	4.6	chr19	1695491	1695788	(56921828)	+	THE1B	LTR/ERVL-MaLR	2	297	(67)	1799320
2403	11.6	3.0	0.8	chr19	2827794	2828149	(55789467)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1801731
1201	21.9	14.0	0.9	chr19	2949859	2950319	(55667297)	+	LTR65	LTR/ERV1	1	524	(145)	1801984
211	39.3	3.9	0.0	chr19	3434802	3434923	(55182693)	+	MIR3	SINE/MIR	38	164	(44)	1803276
27	11.8	0.0	0.0	chr19	3613229	3613274	(55004342)	+	(CCTCGC)n	Simple_repeat	1	46	(0)	1803648
1974	15.7	2.8	3.4	chr19	3914251	3914524	(54703092)	C	THE1B	LTR/ERVL-MaLR	(67)	297	20	1804325
2473	9.9	5.1	0.0	chr19	3922231	3922584	(54695032)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1804352
24	25.9	9.0	1.7	chr19	4123955	4124120	(54493496)	+	(CGAGGC)n	Simple_repeat	1	181	(0)	1804793
28017	7.6	1.3	1.3	chr19	5159634	5165376	(53452240)	C	HERV9-int	LTR/ERV1	(3458)	4978	29	1807255
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
23	17.2	8.0	5.9	chr19	5567903	5567926	(53049690)	+	(CGGCCGCC)n	Simple_repeat	1	113	(39)	1808368
24	21.2	3.4	7.3	chr19	5567927	5568045	(53049571)	+	(CGCC)n	Simple_repeat	1	123	(0)	1808369
11	21.0	2.5	2.4	chr19	5687402	5687441	(52930175)	+	G-rich	Low_complexity	1	41	(0)	1808589
18	21.8	0.0	0.0	chr19	6414686	6414722	(52202894)	+	A-rich	Low_complexity	1	37	(0)	1810196
2201	11.7	6.0	1.4	chr19	6891023	6891369	(51726247)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1811480
8283	5.5	1.0	0.1	chr19	7066661	7067658	(51549958)	C	LTR13	LTR/ERVK	(0)	1007	1	1811925
6527	20.2	4.6	4.7	chr19	7077436	7078435	(51539181)	C	L1MB5	LINE/L1	(5589)	1928	1603	1811944
16	26.7	2.8	6.4	chr19	7920491	7920596	(50697020)	+	(AGCCGG)n	Simple_repeat	1	109	(0)	1813980
12	22.0	4.8	4.5	chr19	8444846	8444908	(50172708)	+	G-rich	Low_complexity	1	66	(0)	1815352
430	25.0	6.0	2.1	chr19	9140307	9140449	(49477167)	+	LTR33B	LTR/ERVL	77	225	(278)	1816898
14	16.4	4.4	4.3	chr19	10296362	10296406	(48321210)	+	(GGC)n	Simple_repeat	1	47	(0)	1819382
23	21.0	2.5	4.9	chr19	10296503	10296581	(48321035)	+	(GGC)n	Simple_repeat	1	81	(0)	1819383
14	15.9	0.0	0.0	chr19	10568987	10569014	(48048602)	+	(CGC)n	Simple_repeat	1	28	(0)	1820117
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
7790	6.5	1.5	0.5	chr19	11771402	11772398	(46845218)	+	LTR13	LTR/ERVK	1	1007	(0)	1823106
11	19.6	12.5	0.0	chr19	12657363	12657426	(45960190)	+	(CCTGTCC)n	Simple_repeat	1	72	(0)	1824940
12	20.1	2.9	0.0	chr19	12769866	12769899	(45847717)	+	(CCG)n	Simple_repeat	1	35	(0)	1825181
47	28.4	0.7	0.7	chr19	12943741	12943882	(45673734)	+	GA-rich	Low_complexity	1	143	(0)	1825590
335	19.7	1.5	0.4	chr19	12944746	12944833	(45672783)	C	AluY	SINE/Alu	(4)	297	224	1825592
11	32.1	0.0	3.3	chr19	12946211	12946271	(45671345)	+	(GCCCCG)n	Simple_repeat	1	61	(0)	1825595
18	11.7	2.6	2.5	chr19	13962827	13962865	(44654751)	+	(CTC)n	Simple_repeat	1	40	(0)	1828222
408	18.6	0.0	3.0	chr19	14142737	14142836	(44474780)	C	L1ME3C	LINE/L1	(228)	5895	5799	1828687
819	23.7	6.7	2.0	chr19	14142837	14143034	(44474582)	C	MER3	DNA/hAT-Charlie	(0)	209	2	1828688
2094	14.5	11.4	2.8	chr19	15062083	15062397	(43555219)	C	MSTA	LTR/ERVL-MaLR	(66)	362	1	1830994
18	6.8	0.0	5.7	chr19	17883775	17883809	(40733807)	+	(GGGGC)n	Simple_repeat	1	35	(0)	1837519
20	24.7	1.8	0.0	chr19	18419440	18419496	(40198120)	+	(GCC)n	Simple_repeat	1	58	(0)	1838870
2408	11.1	3.2	1.9	chr19	19186379	19186745	(39430871)	+	THE1C	LTR/ERVL-MaLR	4	375	(0)	1840450
402	28.6	14.5	1.7	chr19	28606436	28606609	(30011007)	+	LTR2	LTR/ERV1	1	200	(263)	1849048
1522	12.0	0.5	0.0	chr19	28606630	28606838	(30010778)	+	LTR2	LTR/ERV1	292	501	(0)	1849048
1831	16.1	13.3	0.8	chr19	32251981	32252349	(26365267)	+	MSTB	LTR/ERVL-MaLR	1	422	(4)	1854474
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
2516	10.8	3.6	1.4	chr19	33323097	33323452	(25294164)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1856596
2388	11.0	3.7	1.6	chr19	33555715	33556084	(25061532)	C	THE1D	LTR/ERVL-MaLR	(3)	378	1	1856937
222	31.6	11.4	4.1	chr19	33778034	33778155	(24839461)	C	MIR	SINE/MIR	(117)	145	14	1857292
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
1429	24.8	11.8	2.7	chr19	39410929	39411768	(19205848)	+	L2a	LINE/L2	2485	3426	(0)	1869014
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
2074	11.7	0.0	0.7	chr19	40489387	40489685	(18127931)	C	AluSz	SINE/Alu	(13)	299	3	1871222
14	14.6	0.0	3.1	chr19	41940869	41940930	(16676686)	+	(CGC)n	Simple_repeat	1	60	(0)	1874217
1901	13.4	3.2	3.5	chr19	43502443	43502755	(15114861)	C	AluJb	SINE/Alu	(0)	312	1	1876952
13	18.9	2.8	0.0	chr19	43766656	43766691	(14850925)	+	(GCCCCA)n	Simple_repeat	1	37	(0)	1877624
12	8.4	0.0	6.9	chr19	43774647	43774675	(14842941)	+	(GGTCA)n	Simple_repeat	1	29	(0)	1877645
2372	6.7	0.3	1.0	chr19	44081430	44081711	(14535905)	+	AluY	SINE/Alu	1	281	(30)	1878171
32	0.0	3.0	0.0	chr19	44081712	44081744	(14535872)	+	(AAAACA)n	Simple_repeat	1	34	(0)	1878172
2372	6.7	0.3	1.0	chr19	44081745	44081761	(14535855)	+	AluY	SINE/Alu	282	298	(13)	1878171
2367	11.5	2.7	4.7	chr19	44081762	44081921	(14535695)	C	THE1C	LTR/ERVL-MaLR	(211)	164	1	1878170
22	26.8	5.4	2.5	chr19	44955347	44955458	(13662158)	+	(CGG)n	Simple_repeat	1	118	(0)	1880074
25	14.3	3.6	1.7	chr19	45498528	45498583	(13119033)	+	GA-rich	Low_complexity	1	58	(0)	1881471
1783	11.0	8.5	0.7	chr19	46414059	46414339	(12203277)	+	AluSz	SINE/Alu	1	305	(7)	1883597
12	22.4	0.0	6.4	chr19	47130933	47130979	(11486637)	+	GA-rich	Low_complexity	1	47	(0)	1885344
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
51	0.0	0.0	0.0	chr19	47271690	47271733	(11345883)	+	(TG)n	Simple_repeat	1	44	(0)	1885712
24	0.0	0.0	0.0	chr19	47271734	47271760	(11345856)	+	(CG)n	Simple_repeat	1	27	(0)	1885713
18	31.4	0.0	2.6	chr19	47274311	47274388	(11343228)	+	G-rich	Low_complexity	1	78	(0)	1885716
525	21.1	5.5	3.4	chr19	47891935	47892121	(10725495)	+	MER61E	LTR/ERV1	1	193	(586)	1887340
2092	9.4	7.4	6.4	chr19	48051506	48051762	(10565854)	C	THE1D	LTR/ERVL-MaLR	(115)	266	2	1887808
14	19.1	8.7	2.7	chr19	48443197	48443265	(10174351)	+	(GCCGTC)n	Simple_repeat	1	75	(0)	1888783
345	25.0	4.3	2.2	chr19	48872961	48873050	(9744566)	C	MSR1	Satellite	(1)	110	19	1889836
1745	11.7	1.2	0.4	chr19	48967178	48967426	(9650190)	+	AluSp	SINE/Alu	43	293	(20)	1890081
612	13.4	0.0	0.0	chr19	48967440	48967521	(9650095)	+	AluSz6	SINE/Alu	214	295	(17)	1890082
13	17.2	3.9	5.7	chr19	49119142	49119192	(9498424)	+	(TCCCGCC)n	Simple_repeat	1	53	(0)	1890418
2024	14.7	6.6	0.8	chr19	49282164	49282519	(9335097)	C	THE1D	LTR/ERVL-MaLR	(0)	381	4	1890791
1245	9.7	0.0	0.0	chr19	49282520	49282674	(9334942)	+	AluYh3	SINE/Alu	136	290	(21)	1890792
821	14.5	0.0	8.3	chr19	49452002	49452146	(9165470)	+	FLAM_C	SINE/Alu	1	133	(10)	1891121
1000	15.2	1.3	0.0	chr19	49495128	49495278	(9122338)	C	AluJb	SINE/Alu	(5)	307	155	1891220
2471	6.3	1.0	0.0	chr19	49495306	49495608	(9122008)	C	AluSp	SINE/Alu	(4)	309	4	1891221
13	18.0	6.8	0.0	chr19	49808939	49808982	(8808634)	+	G-rich	Low_complexity	1	47	(0)	1891992
1224	22.6	10.1	2.2	chr19	49913244	49913788	(8703828)	+	MER77	LTR/ERVL	7	594	(10)	1892191
2187	6.9	4.3	0.3	chr19	53809251	53809541	(4808075)	+	AluSc	SINE/Alu	1	303	(6)	1900309
2223	10.5	0.3	0.0	chr19	54392687	54392981	(4224635)	+	AluSc8	SINE/Alu	5	300	(11)	1901635
2373	11.3	0.3	3.5	chr19	54392982	54393287	(4224329)	+	THE1B	LTR/ERVL-MaLR	57	363	(1)	1901634
1260	25.4	4.3	14.6	chr19	55272094	55272558	(3345058)	+	L1MB7	LINE/L1	5589	6064	(120)	1903355
36	26.2	5.3	2.2	chr19	55383774	55383943	(3233673)	+	G-rich	Low_complexity	1	179	(0)	1903624
531	25.0	8.8	0.0	chr19	55703664	55703839	(2913777)	+	MER3	DNA/hAT-Charlie	8	200	(9)	1904319
3606	11.2	5.4	1.1	chr19	57579173	57579723	(1037893)	C	MER4D1	LTR/ERV1	(324)	576	1	1908004
45	25.1	5.0	2.1	chr19	58558385	58558565	(59051)	+	(GCC)n	Simple_repeat	1	190	(0)	1909727
5313	11.1	8.3	0.3	chr2	6846889	6847664	(235345865)	C	LTR25	LTR/ERV1	(0)	844	1	1919104
2322	9.2	4.3	0.0	chr2	7047315	7047649	(235145880)	C	THE1A	LTR/ERVL-MaLR	(0)	355	6	1919349
2772	11.8	2.4	1.9	chr2	8361947	8362370	(233831159)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1921278
2257	9.2	14.0	3.2	chr2	10086240	10086578	(232106951)	+	MSTA	LTR/ERVL-MaLR	1	388	(40)	1924140
2182	10.2	13.6	0.6	chr2	10320253	10320617	(231872912)	+	MSTA	LTR/ERVL-MaLR	2	421	(7)	1924568
2462	11.6	0.8	0.0	chr2	11579898	11580258	(230613271)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1926907
1961	13.1	16.1	1.1	chr2	16720710	16721072	(225472457)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1934959
2381	11.2	3.7	0.3	chr2	19891968	19892335	(222301194)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1939433
2370	9.6	0.3	13.9	chr2	24484668	24485078	(217708451)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1946241
2746	11.9	4.0	0.2	chr2	26416785	26417195	(215776334)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	1949926
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
14	31.9	0.0	0.0	chr2	27442515	27442568	(214750961)	+	(CCCGC)n	Simple_repeat	1	54	(0)	1951833
2376	19.7	5.7	11.3	chr2	32767761	32768450	(209425079)	+	BLACKJACK	DNA/hAT-Blackjack	2345	2966	(3)	1960923
31	0.0	0.0	0.0	chr2	37156911	37156939	(205036590)	+	(CGC)n	Simple_repeat	1	29	(0)	1967231
12	26.7	4.1	0.0	chr2	37157099	37157147	(205036382)	+	(GGCG)n	Simple_repeat	1	51	(0)	1967232
7519	11.8	17.4	2.1	chr2	38642286	38643615	(203549914)	C	LTR12C	LTR/ERV1	(0)	1579	4	1969623
60	8.1	0.0	0.0	chr2	43025275	43025352	(199168177)	+	(CT)n	Simple_repeat	1	78	(0)	1976735
4750	12.5	3.2	1.6	chr2	43724874	43725637	(198467892)	C	LTR19C	LTR/ERV1	(0)	779	3	1977965
999	19.2	7.5	6.3	chr2	54116227	54116620	(188076909)	C	Charlie2b	DNA/hAT-Charlie	(77)	2705	2307	1993802
2729	14.1	6.6	1.4	chr2	54116642	54117158	(188076371)	C	LTR10A	LTR/ERV1	(63)	546	1	1993803
1294	22.2	6.8	5.6	chr2	54256305	54256651	(187936878)	C	L1M5	LINE/L1	(658)	5515	5205	1994053
55	25.7	0.0	1.4	chr2	58460834	58460981	(183732548)	+	(TCTCGC)n	Simple_repeat	1	148	(0)	1999812
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
24	8.9	2.8	0.0	chr2	68135537	68135572	(174057957)	+	(GA)n	Simple_repeat	1	37	(0)	2015107
2037	12.8	3.7	9.6	chr2	68931298	68931703	(173261826)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2016273
5220	11.7	1.4	1.4	chr2	69798832	69799610	(172393919)	C	LTR19C	LTR/ERV1	(0)	779	1	2017771
2199	13.4	11.2	0.8	chr2	70418374	70418756	(171774773)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2019071
2112	15.1	4.3	1.4	chr2	71899394	71899757	(170293772)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2021300
1185	30.9	4.3	4.5	chr2	73343986	73344494	(168849035)	+	MamRep137	DNA/TcMar-Tigger	2	509	(1)	2023558
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
18	11.6	0.0	4.9	chr2	85616281	85616321	(156577208)	+	G-rich	Low_complexity	1	41	(0)	2041141
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
2918	14.4	1.1	1.1	chr2	96918679	96919141	(145274388)	+	LTR2	LTR/ERV1	1	463	(0)	2053007
2219	12.2	1.1	4.3	chr2	100231139	100231514	(141962015)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2057579
2447	13.8	6.8	1.2	chr2	100528377	100528711	(141664818)	C	MSTA	LTR/ERVL-MaLR	(65)	363	1	2058023
4382	9.0	3.3	3.1	chr2	102801239	102801912	(139391617)	C	LTR76	LTR/ERV1	(0)	675	1	2061561
8363	5.7	19.0	0.1	chr2	107746624	107747902	(134445627)	C	LTR12C	LTR/ERV1	(0)	1579	2	2068294
1734	22.3	9.4	3.2	chr2	108356406	108356873	(133836656)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	6	2069128
271	30.7	5.6	0.0	chr2	112706523	112706623	(129486906)	+	MamGypsy2-I	LTR/Gypsy	1861	1967	(2199)	2075599
3111	12.1	0.9	1.4	chr2	113601977	113602680	(128590849)	+	TAR1	Satellite/telo	1	700	(1434)	2077035
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
1836	21.4	10.3	1.2	chr2	118772783	118772953	(123420576)	+	MLT1F2	LTR/ERVL-MaLR	2	186	(374)	2084226
50	5.7	0.0	0.0	chr2	118772954	118773009	(123420520)	+	(TC)n	Simple_repeat	1	56	(0)	2084227
1836	21.4	10.3	1.2	chr2	118773010	118773330	(123420199)	+	MLT1F2	LTR/ERVL-MaLR	187	544	(16)	2084226
187	40.5	7.5	0.5	chr2	138058432	138058642	(104134887)	+	L2c	LINE/L2	2666	2892	(527)	2112923
2490	22.2	4.2	1.4	chr2	138058749	138059442	(104134087)	C	L1MC4a	LINE/L1	(0)	7882	7169	2112924
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
1342	15.6	20.7	0.0	chr2	151167347	151167660	(91025869)	C	MSTA	LTR/ERVL-MaLR	(0)	381	1	2130425
8001	5.7	0.3	0.7	chr2	152754873	152755883	(89437646)	+	LTR13	LTR/ERVK	1	1007	(0)	2132887
18380	11.6	1.9	5.7	chr2	157929591	157930549	(84262980)	C	Tigger4	DNA/TcMar-Tigger	(1856)	875	1	2139462
1740	15.7	2.7	3.0	chr2	161130300	161130633	(81062896)	C	THE1C	LTR/ERVL-MaLR	(0)	375	43	2144008
2379	7.4	3.5	0.3	chr2	167941033	167941369	(74252160)	C	THE1A	LTR/ERVL-MaLR	(0)	355	8	2152849
2121	11.3	2.0	0.0	chr2	169012478	169012768	(73180761)	+	AluSx1	SINE/Alu	16	312	(0)	2154390
53590	7.6	0.9	0.4	chr2	170112491	170119294	(72074235)	+	HERVK22-int	LTR/ERVK	1	6837	(0)	2156169
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
2256	12.3	3.1	3.1	chr2	171414774	171415133	(70778396)	+	THE1B	LTR/ERVL-MaLR	1	360	(4)	2158397
2220	15.5	1.6	0.5	chr2	175400934	175401310	(66792219)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2164739
571	30.7	12.5	7.1	chr2	176428412	176428983	(65764546)	+	L2a	LINE/L2	2808	3416	(10)	2166107
2228	10.0	8.4	0.6	chr2	176428985	176429335	(65764194)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2166108
1635	12.4	15.7	1.6	chr2	188009328	188009639	(54183890)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2181118
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
369	24.6	22.1	0.0	chr2	200889717	200889903	(41303626)	C	MIR	SINE/MIR	(21)	241	2	2199072
2370	7.8	0.0	3.1	chr2	202265464	202265588	(39927941)	+	AluSc	SINE/Alu	194	309	(0)	2201570
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
17	0.0	0.0	0.0	chr2	226772678	226772696	(15420833)	+	(A)n	Simple_repeat	1	19	(0)	2239439
385	34.4	11.4	4.1	chr2	230713792	230714179	(11479350)	C	L2c	LINE/L2	(52)	3335	2916	2245577
33	16.1	1.4	1.4	chr2	231461647	231461717	(10731812)	+	(TCATCC)n	Simple_repeat	1	72	(0)	2246913
2622	12.3	7.0	0.0	chr2	231895007	231895403	(10298126)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	2247852
15	0.0	4.0	3.9	chr2	232520600	232520624	(9672905)	+	(TGC)n	Simple_repeat	1	26	(0)	2248790
2179	14.4	7.7	2.5	chr2	235394212	235394616	(6798913)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2253531
2487	9.5	1.1	4.4	chr2	237469429	237469814	(4723715)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	2256402
2387	11.8	1.9	2.7	chr2	240708449	240708815	(1484714)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2260307
1913	13.2	4.8	8.9	chr2	241837311	241837702	(355827)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2261763
2101	15.7	8.5	3.7	chr20	415676	416078	(64028089)	C	MSTA	LTR/ERVL-MaLR	(0)	428	5	2262895
511	12.8	1.3	0.0	chr20	5737643	5737720	(58706447)	+	Alu	SINE/Alu	220	298	(13)	2273171
2437	10.6	4.3	1.1	chr20	31364228	31364590	(33079577)	C	THE1D	LTR/ERVL-MaLR	(0)	381	7	2305783
14	11.6	3.6	0.0	chr20	31675922	31675949	(32768218)	+	(CCT)n	Simple_repeat	1	29	(0)	2306601
14	8.8	0.0	0.0	chr20	32535389	32535412	(31908755)	+	(ATAA)n	Simple_repeat	1	24	(0)	2308608
312	25.6	0.7	14.9	chr20	32535431	32535591	(31908576)	+	UCON86	LINE/L2	311	448	(234)	2308609
2172	11.2	6.5	1.4	chr20	32632813	32633165	(31811002)	C	THE1C	LTR/ERVL-MaLR	(3)	372	1	2308876
1257	16.6	10.5	0.5	chr20	32778716	32778938	(31665229)	+	AluJr	SINE/Alu	38	285	(27)	2309274
17	8.5	2.3	6.8	chr20	33667260	33667302	(30776865)	+	G-rich	Low_complexity	1	44	(0)	2311305
2909	11.6	1.2	1.4	chr20	33779001	33779429	(30664738)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2311590
2456	13.2	2.4	1.1	chr20	39078684	39079059	(25365108)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2323454
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
2176	13.6	5.2	0.8	chr20	44743297	44743660	(19700507)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2334241
14	24.4	2.0	2.0	chr20	45911094	45911143	(18533024)	+	(GCCCC)n	Simple_repeat	1	51	(0)	2336529
2640	8.6	3.5	0.0	chr20	46684316	46684677	(17759490)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2338216
2974	6.4	1.4	0.0	chr20	48756766	48757124	(15687043)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2342793
2677	6.9	1.7	0.6	chr20	48888029	48888379	(15555788)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2343117
454	17.3	0.0	1.3	chr20	49038073	49038147	(15406020)	C	AluSc5	SINE/Alu	(110)	199	126	2343454
505	20.6	1.0	2.0	chr20	49038255	49038356	(15405811)	C	AluJb	SINE/Alu	(19)	293	193	2343455
191	32.3	1.6	0.0	chr20	49915961	49916022	(14528145)	C	MIRc	SINE/MIR	(119)	149	87	2345602
579	17.4	0.9	0.9	chr20	49916080	49916189	(14527978)	+	MIRc	SINE/MIR	47	156	(112)	2345603
18	15.0	4.1	3.9	chr20	50190916	50190964	(14253203)	+	(GCA)n	Simple_repeat	1	51	(0)	2346323
2398	9.7	6.9	1.7	chr20	53429333	53429677	(11014490)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2353453
2243	13.7	6.3	0.0	chr20	54058857	54059213	(10384954)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2354944
24	23.1	0.0	2.9	chr20	56468525	56468593	(7975574)	+	(GCCCC)n	Simple_repeat	1	69	(0)	2359091
425	15.9	0.1	6.5	chr20	56774886	56774977	(7669190)	C	MSTA	LTR/ERVL-MaLR	(116)	349	221	2359827
1907	12.3	13.3	0.0	chr20	56774984	56775316	(7668851)	+	MSTA	LTR/ERVL-MaLR	45	428	(0)	2359828
17	24.5	1.6	3.2	chr20	62122132	62122192	(2321975)	+	(CCGC)n	Simple_repeat	1	62	(0)	2368176
16	23.0	5.6	4.0	chr20	63969865	63969935	(474232)	+	(GC)n	Simple_repeat	1	75	(0)	2370305
17	22.4	7.3	0.0	chr20	63969995	63970011	(474156)	+	G-rich	Low_complexity	1	41	(32)	2370306
26	5.2	2.5	0.0	chr20	63970012	63970051	(474116)	+	(GGGGCG)n	Simple_repeat	1	41	(0)	2370307
17	22.4	7.3	0.0	chr20	63970052	63970062	(474105)	+	G-rich	Low_complexity	42	73	(0)	2370306
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
839	28.7	17.2	1.1	chr21	14536896	14537534	(32172449)	+	L2a	LINE/L2	2636	3415	(11)	2377965
3943	22.6	6.2	5.6	chr21	15742711	15743779	(30966204)	C	LTR27E	LTR/ERV1	(0)	1077	7	2379561
226	12.2	8.9	0.0	chr21	15743821	15743861	(30966122)	C	LTR27D	LTR/ERV1	(570)	45	1	2379562
1979	16.3	9.6	1.5	chr21	17823814	17824206	(28885777)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2382252
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
3418	16.0	5.5	1.2	chr21	33234740	33235350	(13474633)	C	MER41B	LTR/ERV1	(38)	596	1	2404561
2075	10.4	5.9	0.3	chr21	33988199	33988517	(12721466)	C	MSTA	LTR/ERVL-MaLR	(2)	426	89	2405943
2812	7.5	0.3	2.1	chr21	35718502	35718883	(10991100)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2408538
2370	9.2	0.3	0.3	chr21	36994223	36994528	(9715455)	+	AluSx3	SINE/Alu	1	306	(5)	2410815
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
1987	14.2	7.4	3.2	chr21	38360588	38360935	(8349048)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2412926
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
17	18.5	0.0	0.0	chr21	39349263	39349293	(7360690)	+	(C)n	Simple_repeat	1	31	(0)	2414411
377	25.5	16.5	0.6	chr21	41847650	41847807	(4862176)	+	MER3	DNA/hAT-Charlie	1	188	(21)	2418070
2133	11.5	6.6	0.3	chr21	42754600	42754938	(3955045)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2419279
32	23.9	1.2	1.1	chr21	42974686	42974771	(3735212)	+	(CCG)n	Simple_repeat	1	87	(0)	2419664
3064	9.9	0.6	2.3	chr21	43738448	43738922	(2971061)	+	LTR14	LTR/ERVK	1	467	(81)	2420730
2054	13.3	2.0	0.0	chr21	43855411	43855703	(2854280)	C	AluSx1	SINE/Alu	(13)	299	1	2420930
552	26.9	6.5	0.0	chr21	44867247	44867432	(1842551)	+	L1ME2z	LINE/L1	5798	5996	(448)	2422266
327	35.5	7.9	2.2	chr21	44867498	44867817	(1842166)	+	L1ME2z	LINE/L1	6102	6441	(3)	2422266
20	3.1	6.1	0.0	chr21	45073746	45073778	(1636205)	+	(AAAC)n	Simple_repeat	1	35	(0)	2422492
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
2589	5.8	8.2	0.0	chr21	45593459	45593784	(1116199)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2422974
2241	13.8	2.5	0.3	chr21	46040799	46041154	(668829)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2423443
288	15.4	13.0	2.6	chr21	46253743	46253819	(456164)	+	MSTA	LTR/ERVL-MaLR	114	215	(213)	2423675
281	16.3	7.1	0.9	chr21	46253862	46253939	(456044)	+	THE1D	LTR/ERVL-MaLR	114	192	(183)	2423676
1367	11.4	15.4	0.8	chr21	46253918	46254182	(455801)	+	MSTA	LTR/ERVL-MaLR	118	428	(0)	2423677
726	11.2	0.0	2.8	chr21	46320431	46320537	(389446)	+	AluSq	SINE/Alu	205	308	(5)	2423803
1353	15.5	17.6	0.0	chr21	46320538	46320992	(388991)	+	LTR62	LTR/ERVL	65	604	(105)	2423801
481	25.8	13.9	0.0	chr22	19440410	19440595	(31377873)	+	L2a	LINE/L2	2613	2828	(591)	2432012
1541	18.9	2.2	2.2	chr22	19497799	19497911	(31320557)	+	AluJo	SINE/Alu	19	135	(177)	2432105
14	12.7	1.9	9.4	chr22	19523387	19523438	(31295030)	+	G-rich	Low_complexity	1	53	(0)	2432135
185	34.0	4.5	2.8	chr22	19643821	19643929	(31174539)	C	MER5A	DNA/hAT-Charlie	(0)	189	79	2432367
1994	13.8	4.9	1.0	chr22	20001522	20001817	(30816651)	+	AluSp	SINE/Alu	1	308	(5)	2432778
14	16.4	2.9	0.0	chr22	20320135	20320168	(30498300)	+	(CCGCC)n	Simple_repeat	1	35	(0)	2433108
40	0.0	0.0	0.0	chr22	20322800	20322833	(30495635)	+	(TG)n	Simple_repeat	1	34	(0)	2433115
6757	8.3	6.5	1.5	chr22	20391615	20392922	(30425546)	C	LTR12C	LTR/ERV1	(0)	1322	1	2433230
1722	10.4	12.9	0.4	chr22	20493500	20493769	(30324699)	+	AluSx3	SINE/Alu	1	309	(2)	2433421
996	28.1	14.3	7.1	chr22	20528624	20529173	(30289295)	C	HAL1	LINE/L1	(1837)	670	101	2433497
1248	16.2	1.4	3.1	chr22	20623699	20623921	(30194547)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2433644
2531	6.3	0.3	0.0	chr22	20643307	20643606	(30174862)	C	AluY	SINE/Alu	(10)	301	1	2433679
428	24.7	10.0	1.2	chr22	20652402	20652565	(30165903)	+	Kanga1	DNA/TcMar-Tc2	1393	1572	(173)	2433704
18	21.1	1.7	3.4	chr22	20652719	20652776	(30165692)	+	(GCTGGT)n	Simple_repeat	1	59	(0)	2433705
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
2127	11.3	0.3	0.0	chr22	20757552	20757843	(30060625)	C	AluSz	SINE/Alu	(19)	293	1	2433863
8854	17.3	6.6	2.8	chr22	20832755	20833566	(29984902)	C	L1PA15	LINE/L1	(4874)	1911	1030	2434005
728	21.7	0.8	0.0	chr22	20838797	20838925	(29979543)	+	FLAM_A	SINE/Alu	1	130	(12)	2434025
551	27.5	6.6	1.7	chr22	21068982	21069155	(29749313)	+	MER58A	DNA/hAT-Charlie	42	224	(0)	2434499
2114	12.8	0.0	0.3	chr22	21724897	21725208	(29093260)	C	AluSq2	SINE/Alu	(2)	311	1	2435764
2156	9.1	0.0	3.2	chr22	21725221	21725528	(29092940)	C	AluY	SINE/Alu	(13)	298	1	2435765
2230	10.5	1.0	0.3	chr22	21899154	21899448	(28919020)	C	AluSx1	SINE/Alu	(14)	298	2	2436174
2261	10.2	0.3	0.7	chr22	21899462	21899764	(28918704)	C	AluSp	SINE/Alu	(11)	302	1	2436175
3396	26.9	9.1	1.3	chr22	21902783	21903495	(28914973)	C	L1MD2	LINE/L1	(5741)	806	35	2436165
298	21.4	16.0	4.0	chr22	21903526	21903583	(28914885)	C	ORSL	DNA/hAT-Tip100	(0)	275	212	2436183
31	0.0	0.0	0.0	chr22	21903584	21903610	(28914858)	+	(CA)n	Simple_repeat	1	27	(0)	2436184
236	26.7	1.6	0.0	chr22	21912536	21912595	(28905873)	+	MER45R	DNA/hAT-Tip100	59	119	(1462)	2436210
2260	10.8	0.3	0.7	chr22	21912603	21912907	(28905561)	C	AluSx3	SINE/Alu	(5)	306	3	2436211
869	20.0	0.7	0.0	chr22	21968083	21968227	(28850241)	C	AluJo	SINE/Alu	(31)	281	136	2436285
2544	26.1	2.3	2.5	chr22	22094263	22095127	(28723341)	+	L1MA6	LINE/L1	5397	6259	(41)	2436469
899	19.5	1.4	6.0	chr22	22342055	22342168	(28476300)	+	L1MB4	LINE/L1	5973	6086	(94)	2436773
7552	23.9	4.6	4.7	chr22	22453275	22455413	(28363055)	+	HERVI-int	LTR/ERV1	4	2139	(5464)	2436870
2955	18.0	9.4	0.5	chr22	22459938	22460540	(28357928)	C	LTR9C	LTR/ERV1	(0)	666	5	2436871
2249	28.1	7.0	1.7	chr22	22576862	22577664	(28240804)	C	L1MD2	LINE/L1	(5673)	874	27	2437107
223	32.9	3.4	0.0	chr22	22660519	22660603	(28157865)	+	MIRb	SINE/MIR	65	152	(116)	2437237
312	32.7	3.3	4.2	chr22	22706347	22706563	(28111905)	C	ERV3-16A3_I-int	LTR/ERVL	(1817)	3409	3195	2437280
545	33.0	7.7	1.4	chr22	22706559	22707033	(28111435)	C	ERV3-16A3_I-int	LTR/ERVL	(2351)	3316	2692	2437281
1610	20.7	4.2	5.2	chr22	22737573	22737959	(28080509)	+	MLT1B	LTR/ERVL-MaLR	8	390	(0)	2437323
529	28.9	12.8	6.0	chr22	22782365	22782668	(28035800)	C	L2a	LINE/L2	(1209)	2210	1929	2437383
1109	23.7	2.2	4.9	chr22	22784462	22784785	(28033683)	+	MER89-int	LTR/ERV1	1043	1357	(5444)	2437389
1550	23.8	2.3	0.6	chr22	22784786	22785131	(28033337)	+	MLT1A0	LTR/ERVL-MaLR	1	352	(13)	2437390
1052	24.8	3.0	2.4	chr22	22785149	22785445	(28033023)	+	MER89-int	LTR/ERV1	1361	1659	(5142)	2437389
16	18.9	0.0	0.0	chr22	22786473	22786508	(28031960)	+	(GGCCT)n	Simple_repeat	1	36	(0)	2437392
4379	7.9	0.3	1.6	chr22	22786598	22787175	(28031293)	C	LTR22	LTR/ERVK	(0)	571	1	2437393
4385	27.0	7.0	1.4	chr22	22812580	22814135	(28004333)	C	ERVL-B4-int	LTR/ERVL	(759)	4955	3307	2437423
358	29.6	31.1	1.1	chr22	22820173	22820548	(27997920)	+	LTR16	LTR/ERVL	1	493	(2)	2437429
235	29.6	7.2	0.7	chr22	22823874	22824016	(27994452)	C	LTR88b	LTR/Gypsy?	(580)	257	105	2437432
1234	24.9	5.5	1.4	chr22	22875579	22875928	(27942540)	C	MLT2D	LTR/ERVL	(48)	366	2	2437492
2142	29.1	10.2	1.4	chr22	22986016	22987291	(27831177)	+	L2a	LINE/L2	1986	3374	(52)	2437612
2556	16.7	3.7	0.8	chr22	22989838	22990309	(27828159)	C	MER66B	LTR/ERV1	(0)	486	1	2437618
7931	13.9	1.3	0.2	chr22	23000056	23001240	(27817228)	C	MSTA-int	LTR/ERVL-MaLR	(5)	1626	429	2437631
4744	13.3	3.4	1.4	chr22	23013698	23014429	(27804039)	C	LTR1C	LTR/ERV1	(0)	747	1	2437652
1446	12.1	0.5	1.0	chr22	23015502	23015708	(27802760)	C	AluSq2	SINE/Alu	(17)	296	91	2437655
5662	10.6	5.7	0.7	chr22	23031671	23032525	(27785943)	+	MER4D1	LTR/ERV1	1	900	(0)	2437685
426	28.8	1.3	2.5	chr22	23039131	23039287	(27779181)	C	MIR	SINE/MIR	(94)	168	14	2437694
24584	9.5	2.2	0.6	chr22	23046972	23052748	(27765720)	+	L1PB1	LINE/L1	251	6867	(0)	2437701
557	31.9	18.5	1.5	chr22	23090180	23090953	(27727515)	+	L2a	LINE/L2	2466	3419	(7)	2437749
228	19.3	0.0	8.1	chr22	23115048	23115109	(27703359)	+	MamSINE1	SINE/tRNA-RTE	59	115	(175)	2437765
199	30.9	12.1	2.4	chr22	23115279	23115404	(27703064)	+	L3b	LINE/CR1	4563	4702	(530)	2437766
1336	27.4	7.0	2.3	chr22	23265627	23266081	(27552387)	C	L1MC4	LINE/L1	(0)	8042	7566	2438026
1099	21.6	11.5	4.8	chr22	24728885	24729357	(26089111)	+	MER61F	LTR/ERV1	1	639	(37)	2440543
1994	17.9	6.3	5.4	chr22	27716998	27717421	(23101047)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2447363
2798	8.0	0.8	0.0	chr22	28868414	28868774	(21949694)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2449448
424	20.0	0.0	0.0	chr22	29152701	29152775	(21665693)	C	AluJb	SINE/Alu	(8)	304	230	2449978
3581	13.4	3.1	3.0	chr22	29152776	29153407	(21665061)	C	MER41B	LTR/ERV1	(38)	596	1	2449979
1831	13.8	6.6	10.6	chr22	29163016	29163371	(21655097)	+	THE1D	LTR/ERVL-MaLR	1	347	(34)	2450002
14	22.2	5.5	3.9	chr22	29481001	29481080	(21337388)	+	(GCGACGC)n	Simple_repeat	1	81	(0)	2450661
453	24.8	8.7	0.7	chr22	30356405	30356542	(20461926)	C	MER5A1	DNA/hAT-Charlie	(0)	166	17	2452430
561	16.2	24.9	0.0	chr22	30444853	30444994	(20373474)	+	MER53	DNA/hAT	5	193	(0)	2452623
2036	11.8	6.6	2.7	chr22	35230881	35231246	(15587222)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2462530
16	18.0	4.5	0.0	chr22	37608817	37608860	(13209608)	+	G-rich	Low_complexity	1	46	(0)	2467651
2280	3.7	5.5	0.0	chr22	37844596	37844867	(12973601)	C	AluSc	SINE/Alu	(21)	288	1	2468202
1096	30.9	12.3	1.9	chr22	38200999	38201741	(12616727)	C	L2a	LINE/L2	(228)	3198	2244	2469021
12	7.4	0.0	11.1	chr22	38214831	38214866	(12603602)	+	(CCCGG)n	Simple_repeat	1	36	(0)	2469052
2686	10.5	1.1	0.3	chr22	40165565	40165936	(10652532)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2473052
1444	16.1	4.4	2.6	chr22	40322195	40322462	(10496006)	C	L1MC1	LINE/L1	(9)	6324	6052	2473333
1832	13.3	12.2	3.0	chr22	45480746	45481116	(5337352)	+	MSTA	LTR/ERVL-MaLR	2	411	(17)	2484032
2445	9.7	2.1	5.1	chr22	46019390	46019730	(4798738)	+	THE1D	LTR/ERVL-MaLR	1	341	(40)	2484888
2392	14.4	3.7	2.8	chr22	47568718	47569099	(3249369)	C	MSTA	LTR/ERVL-MaLR	(36)	392	1	2487058
1663	14.7	12.8	1.1	chr22	49657330	49657700	(1160768)	C	MSTA	LTR/ERVL-MaLR	(7)	421	1	2489606
14	31.2	0.0	0.0	chr22	50089801	50089851	(728617)	+	(CCGC)n	Simple_repeat	1	51	(0)	2490170
17	2.6	6.4	8.0	chr22	50090013	50090059	(728409)	+	(GCGGC)n	Simple_repeat	1	50	(0)	2490171
12	17.6	0.0	0.0	chr3	4763899	4763925	(193531634)	+	(TTTA)n	Simple_repeat	1	27	(0)	2499558
1715	14.3	15.6	0.6	chr3	4802945	4803303	(193492256)	C	MSTA	LTR/ERVL-MaLR	(2)	426	4	2499613
214	34.5	1.2	0.0	chr3	9827236	9827319	(188468240)	C	L2c	LINE/L2	(62)	3325	3241	2508043
1619	15.5	2.6	3.7	chr3	9827405	9827675	(188467884)	C	AluJb	SINE/Alu	(21)	291	24	2508044
2261	17.9	3.3	1.0	chr3	10680830	10681247	(187614312)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2509881
1047	9.7	12.5	0.0	chr3	12258484	12258658	(186036901)	C	MSTA	LTR/ERVL-MaLR	(228)	200	1	2512943
306	28.1	15.8	0.0	chr3	12836408	12836503	(185459056)	C	MIRb	SINE/MIR	(40)	228	115	2514220
3664	18.5	3.9	2.5	chr3	13002583	13003163	(185292396)	+	L1MB7	LINE/L1	5232	5826	(358)	2514454
2669	8.2	0.8	0.3	chr3	14744568	14744920	(183550639)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2517535
207	30.4	2.9	6.7	chr3	14744921	14745045	(183550514)	+	MIRc	SINE/MIR	143	264	(4)	2517533
13	19.3	2.2	4.3	chr3	15206100	15206144	(183089415)	+	(GCCCG)n	Simple_repeat	1	46	(0)	2518367
16	22.1	0.0	0.0	chr3	16936519	16936550	(181359009)	+	A-rich	Low_complexity	1	32	(0)	2521224
2463	11.9	0.8	0.3	chr3	17580961	17581322	(180714237)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2522068
14	28.9	1.4	4.1	chr3	23202914	23202985	(175092574)	+	(CCCCGC)n	Simple_repeat	1	73	(0)	2529841
12	28.9	0.0	2.1	chr3	23202990	23203000	(175092559)	+	G-rich	Low_complexity	1	26	(22)	2529842
12	16.1	0.0	3.3	chr3	23203001	23203030	(175092529)	+	GA-rich	Low_complexity	1	30	(0)	2529843
2198	24.3	5.5	2.1	chr3	31314551	31314580	(166980979)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	554	2541912
1854	15.9	11.7	2.6	chr3	31314581	31314968	(166980591)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2541913
13	25.0	5.7	0.0	chr3	31452852	31452904	(166842655)	+	(TCTCGA)n	Simple_repeat	1	56	(0)	2542115
427	32.3	7.7	6.6	chr3	36958021	36958355	(161337204)	+	L2c	LINE/L2	3049	3387	(0)	2550713
218	38.0	5.8	1.7	chr3	38163112	38163226	(160132333)	+	L2c	LINE/L2	3062	3181	(206)	2552608
394	23.1	10.4	4.7	chr3	38163318	38163444	(160132115)	C	LTR39	LTR/ERV1	(0)	783	649	2552609
2409	10.9	4.5	0.8	chr3	46504755	46505115	(151790444)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2565494
327	20.2	9.0	5.3	chr3	46756977	46757094	(151538465)	+	MLT1E3	LTR/ERVL-MaLR	65	172	(452)	2565893
2203	10.0	1.0	0.0	chr3	46757095	46757385	(151538174)	C	AluSx	SINE/Alu	(18)	294	1	2565894
19	0.0	0.0	0.0	chr3	49295715	49295735	(148999824)	+	(CA)n	Simple_repeat	1	21	(0)	2571013
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
33	0.0	0.0	0.0	chr3	51500117	51500152	(146795407)	+	(A)n	Simple_repeat	1	36	(0)	2574462
2566	8.8	2.9	6.7	chr3	53197094	53197442	(145098117)	+	THE1C	LTR/ERVL-MaLR	1	350	(25)	2577181
407	21.4	20.6	1.5	chr3	72086681	72086813	(126208746)	+	MLT1K	LTR/ERVL-MaLR	421	585	(10)	2608432
12	11.1	6.9	0.0	chr3	98584064	98584092	(99711467)	+	A-rich	Low_complexity	1	31	(0)	2639125
1927	10.6	8.1	4.6	chr3	107861906	107862272	(90433287)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2651452
1253	16.9	5.2	10.5	chr3	108124736	108124858	(90170701)	C	MLT1B	LTR/ERVL-MaLR	(65)	325	233	2651858
2502	9.1	3.5	0.6	chr3	108124859	108125222	(90170337)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2651859
21	16.1	0.0	0.0	chr3	109118118	109118159	(89177400)	+	(CGCCCA)n	Simple_repeat	1	42	(0)	2653271
2012	13.9	5.2	2.8	chr3	110504945	110505299	(87790260)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2655345
2244	12.2	5.5	0.6	chr3	118810624	118810985	(79484574)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2666734
2017	13.1	9.9	0.3	chr3	119320789	119321117	(78974442)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2667369
13	18.9	2.8	0.0	chr3	119579862	119579897	(78715662)	+	(CCCCGCC)n	Simple_repeat	1	37	(0)	2667826
3033	9.6	4.7	0.2	chr3	125433023	125433450	(72862109)	C	MER83	LTR/ERV1	(0)	448	1	2677006
309	23.6	2.4	13.4	chr3	125433451	125433513	(72862046)	C	MIRb	SINE/MIR	(109)	159	111	2677005
21	26.2	1.8	6.1	chr3	128492902	128493013	(69802546)	+	G-rich	Low_complexity	1	114	(0)	2681802
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
2815	7.1	0.3	0.6	chr3	129361045	129361400	(68934159)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2683603
452	24.3	12.3	0.0	chr3	129399975	129400081	(68895478)	C	FLAM_A	SINE/Alu	(20)	122	1	2683667
1970	10.4	0.0	5.0	chr3	129400121	129400447	(68895112)	C	AluSx	SINE/Alu	(0)	312	1	2683668
19	17.5	0.0	0.0	chr3	138175002	138175034	(60120525)	+	(T)n	Simple_repeat	1	33	(0)	2697100
550	31.5	12.8	1.8	chr3	139344375	139344707	(58950852)	C	L2b	LINE/L2	(1)	3374	3000	2699177
1861	14.3	5.8	1.7	chr3	143140610	143140971	(55154588)	+	THE1D	LTR/ERVL-MaLR	1	378	(3)	2705252
14	26.8	3.2	6.1	chr3	143971700	143971794	(54323765)	+	(CCGCTC)n	Simple_repeat	1	98	(0)	2706423
260	31.8	8.5	1.3	chr3	149151791	149151943	(49143616)	C	Tigger16b	DNA/TcMar-Tigger	(0)	336	172	2713138
16	6.1	8.8	0.0	chr3	156816142	156816175	(41479384)	+	(GCGCT)n	Simple_repeat	1	37	(0)	2724604
2197	14.2	3.0	3.0	chr3	160204381	160204743	(38090816)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	2729456
2004	15.6	10.1	4.2	chr3	160204744	160205003	(38090556)	+	MSTA	LTR/ERVL-MaLR	102	400	(28)	2729455
1548	16.1	11.4	5.0	chr3	168141585	168141983	(30153576)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2739651
2642	11.0	0.5	1.1	chr3	170699688	170700064	(27595495)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2743453
2271	24.0	10.4	2.5	chr3	170727674	170728737	(27566822)	+	L2a	LINE/L2	2276	3426	(0)	2743500
1692	14.8	13.1	2.9	chr3	172846228	172846610	(25448949)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2746798
2466	7.1	1.3	1.3	chr3	177144472	177144779	(21150780)	+	AluY	SINE/Alu	1	308	(3)	2752664
9089	11.0	7.3	9.7	chr3	177202846	177204462	(21091097)	C	LTR12C	LTR/ERV1	(0)	1579	3	2752776
1707	16.9	6.9	1.5	chr3	182295710	182296052	(15999507)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	2760847
2728	10.0	0.8	0.0	chr3	183061850	183062209	(15233350)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	2762020
2409	12.7	11.7	0.8	chr3	183361331	183361711	(14933848)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2762537
2393	12.2	3.6	0.8	chr3	183687691	183688044	(14607515)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2763167
2613	8.0	5.2	5.7	chr3	186002567	186002949	(12292610)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2767563
2248	12.9	4.1	0.8	chr3	191425336	191425687	(6869872)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2776503
440	28.8	15.2	2.0	chr3	193942675	193942919	(4352640)	C	MLT1J1	LTR/ERVL-MaLR	(159)	285	3	2780253
1997	18.2	7.3	2.5	chr3	194260011	194260415	(4035144)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	2780838
23	8.0	5.0	0.0	chr3	194583890	194583929	(3711630)	+	(CGG)n	Simple_repeat	1	42	(0)	2781440
4095	15.4	3.6	1.3	chr3	194928677	194929381	(3366178)	+	MER50	LTR/ERV1	1	722	(12)	2782087
1682	17.8	7.2	1.7	chr3	195247690	195248043	(3047516)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2782595
16	18.7	6.1	0.0	chr3	195543395	195543443	(2752116)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2783235
205	27.1	0.0	2.8	chr3	195849779	195849850	(2445709)	C	L2b	LINE/L2	(2116)	1303	1234	2783734
222	27.8	0.0	0.0	chr3	195850023	195850076	(2445483)	+	MER5B	DNA/hAT-Charlie	1	54	(124)	2783739
1774	16.3	14.0	0.8	chr3	196045322	196045692	(2249867)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2784086
2071	12.2	0.7	0.0	chr3	196048033	196048318	(2247241)	+	AluSz	SINE/Alu	9	296	(16)	2784091
1688	11.9	4.1	0.0	chr3	196048374	196048608	(2246951)	+	AluSx1	SINE/Alu	1	245	(67)	2784092
555	24.4	2.9	1.5	chr3	197444481	197444617	(850942)	C	MIRb	SINE/MIR	(105)	163	25	2786915
13	13.2	0.0	0.0	chr4	786564	786588	(189427967)	+	(CTC)n	Simple_repeat	1	25	(0)	2789523
6341	11.7	5.1	2.0	chr4	1729264	1730031	(188484524)	C	LTR13	LTR/ERVK	(0)	1007	209	2790543
1554	14.0	14.1	1.5	chr4	2036936	2037276	(188177279)	+	MSTA	LTR/ERVL-MaLR	1	391	(37)	2790990
2108	12.9	11.2	2.3	chr4	2054153	2054541	(188160014)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2791026
2430	9.3	0.3	0.0	chr4	2382748	2383101	(187831454)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2791488
2404	11.5	0.8	2.2	chr4	2383174	2383530	(187831025)	+	THE1A	LTR/ERVL-MaLR	3	354	(1)	2791486
792	30.9	6.3	4.8	chr4	4524256	4524833	(185689722)	+	MLT1K	LTR/ERVL-MaLR	1	587	(8)	2794865
7969	6.3	23.6	0.1	chr4	6672541	6673747	(183540808)	+	LTR12C	LTR/ERV1	2	1579	(0)	2798852
2672	9.4	0.8	0.3	chr4	7753884	7754236	(182460319)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2800637
1990	12.1	2.6	16.1	chr4	8543584	8544025	(181670530)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2801918
212	29.6	3.2	4.9	chr4	14920485	14920608	(175293947)	+	L2b	LINE/L2	3298	3426	(0)	2811802
8014	13.7	11.6	1.8	chr4	22777717	22779135	(167435420)	C	LTR12C	LTR/ERV1	(0)	1579	3	2824533
2297	11.4	3.9	0.3	chr4	22997346	22997696	(167216859)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2824885
33	0.0	2.9	0.0	chr4	25160484	25160518	(165054037)	+	(AAAAC)n	Simple_repeat	1	36	(0)	2828388
2567	8.5	0.8	0.0	chr4	34039759	34040110	(156174445)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2841581
2666	16.3	3.3	3.9	chr4	48204052	48204566	(142009989)	+	MER68	LTR/ERVL	1	512	(51)	2863463
2453	9.4	2.6	1.1	chr4	48440953	48441327	(141773228)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2863854
2136	12.6	11.0	4.0	chr4	52592390	52592566	(137621989)	+	MSTA	LTR/ERVL-MaLR	1	200	(228)	2866411
1991	14.0	3.6	0.0	chr4	52592567	52592858	(137621697)	+	AluSx	SINE/Alu	2	304	(8)	2866412
2505	3.5	0.0	2.1	chr4	53363556	53363844	(136850711)	+	AluYc	SINE/Alu	5	287	(12)	2867588
34	24.0	0.0	0.0	chr4	54064666	54064748	(136149807)	+	G-rich	Low_complexity	1	83	(0)	2868662
1016	30.2	9.3	1.1	chr4	55354484	55354945	(134859610)	+	L2a	LINE/L2	2913	3416	(10)	2870738
2281	8.8	7.1	0.6	chr4	55784801	55785156	(134429399)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2871463
2823	8.3	0.3	0.3	chr4	56742091	56742454	(133472101)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2873169
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
2287	11.8	2.4	2.1	chr4	72013310	72013689	(118200866)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2892958
27	20.4	1.6	0.0	chr4	73258763	73258824	(116955731)	+	(GCC)n	Simple_repeat	1	63	(0)	2894657
23	25.4	1.4	1.4	chr4	73258825	73258834	(116955721)	+	(GCCACC)n	Simple_repeat	1	73	(0)	2894658
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
219	34.4	4.3	7.1	chr4	78691909	78692077	(111522478)	C	L2c	LINE/L2	(228)	3159	2996	2902571
2059	11.3	6.9	1.1	chr4	87733003	87733359	(102481196)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	2915985
217	35.3	10.5	2.9	chr4	87733360	87733523	(102481032)	+	L2b	LINE/L2	3194	3374	(1)	2915984
1474	4.8	0.0	0.0	chr4	94076243	94076407	(96138148)	+	AluYe5	SINE/Alu	146	310	(0)	2924466
25	26.9	1.7	5.0	chr4	99946616	99946732	(90267823)	+	(GGCGGC)n	Simple_repeat	1	119	(0)	2932376
662	19.4	5.3	0.0	chr4	108131014	108131137	(82083418)	C	FLAM_A	SINE/Alu	(11)	131	1	2942985
753	17.1	22.9	3.8	chr4	108131161	108131405	(82083150)	+	AluJb	SINE/Alu	9	300	(12)	2942986
15	12.2	0.0	0.0	chr4	109302706	109302732	(80911823)	+	(GTGA)n	Simple_repeat	1	27	(0)	2944734
13	25.1	6.6	0.0	chr4	109302732	109302792	(80911763)	+	(GCGCCCG)n	Simple_repeat	1	65	(0)	2944735
3946	14.7	3.9	3.6	chr4	110248492	110249142	(79965413)	C	LTR62	LTR/ERVL	(1)	708	48	2946273
2224	12.7	4.9	2.3	chr4	118574193	118574546	(71640009)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2957130
23	26.4	1.0	5.0	chr4	121697004	121697102	(68517453)	+	(CGGCC)n	Simple_repeat	1	100	(0)	2961412
1774	16.8	7.6	0.8	chr4	123683671	123684025	(66530530)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2964377
2807	7.1	0.3	0.0	chr4	128245301	128245654	(61968901)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2970446
2348	11.7	8.4	0.2	chr4	153362224	153362616	(36851939)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3004507
447	18.4	3.5	9.2	chr4	154417573	154417692	(35796863)	C	MER53	DNA/hAT	(80)	113	1	3006000
1909	16.8	4.8	0.8	chr4	158964667	158965026	(31249529)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3012165
2051	16.2	10.3	0.3	chr4	165402404	165402786	(24811769)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3021032
2182	12.5	3.1	2.9	chr4	168536433	168536812	(21677743)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3024948
305	32.2	17.1	0.0	chr4	169798322	169798467	(20416088)	+	LTR88b	LTR/Gypsy?	209	384	(432)	3026852
2748	6.5	0.6	0.8	chr4	169798468	169798823	(20415732)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3026853
2180	14.9	10.5	4.2	chr4	182065334	182065682	(8148873)	C	MSTA	LTR/ERVL-MaLR	(40)	388	1	3042899
1890	15.6	12.7	2.4	chr4	182483644	182484025	(7730530)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	3043462
1999	25.3	3.4	4.4	chr4	184684541	184685156	(5529399)	C	MER90a	LTR/ERV1	(0)	614	5	3047013
2564	11.0	0.3	0.3	chr4	186758963	186759317	(3455238)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3050097
1536	15.4	18.2	0.3	chr5	935618	935968	(180602291)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3055807
2038	17.2	7.8	0.3	chr5	2288942	2289332	(179248927)	C	MSTB	LTR/ERVL-MaLR	(0)	426	4	3057120
4129	15.2	1.7	0.8	chr5	2917482	2918186	(178620073)	C	MER50	LTR/ERV1	(23)	711	1	3057782
15	19.5	0.0	0.0	chr5	3536088	3536122	(178002137)	+	(CGCGCA)n	Simple_repeat	1	35	(0)	3058439
1897	14.1	3.5	3.5	chr5	5031726	5032099	(176506160)	+	THE1D	LTR/ERVL-MaLR	8	381	(0)	3060062
2162	14.2	11.4	0.5	chr5	6195244	6195624	(175342635)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3061507
2387	14.7	4.7	2.7	chr5	8012297	8012709	(173525550)	C	MSTB	LTR/ERVL-MaLR	(0)	426	5	3063850
34	0.0	0.0	0.0	chr5	10249898	10249934	(171288325)	+	(A)n	Simple_repeat	1	37	(0)	3066554
3491	19.4	0.8	0.2	chr5	10507548	10508145	(171030114)	+	MER77	LTR/ERVL	1	602	(2)	3067023
531	24.9	8.4	2.0	chr5	10589189	10589389	(170948870)	+	MER54A	LTR/ERVL	373	587	(314)	3067192
3824	10.9	4.1	2.1	chr5	12573944	12575033	(168963226)	C	LTR12C	LTR/ERV1	(902)	677	2	3069743
2248	13.6	3.0	2.5	chr5	16577643	16578003	(164960256)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	3075194
1656	17.4	2.7	8.1	chr5	24773744	24774100	(156764159)	C	MER2	DNA/TcMar-Tigger	(0)	345	9	3086493
2211	20.6	4.7	0.9	chr5	24774089	24774539	(156763720)	C	MLT2B4	LTR/ERVL	(87)	469	1	3086492
1823	15.3	5.7	1.7	chr5	27723531	27723644	(153814615)	+	AluSz	SINE/Alu	1	114	(198)	3090262
1992	15.3	4.7	2.2	chr5	27723645	27723999	(153814260)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3090263
2755	9.7	0.8	0.0	chr5	31975137	31975497	(149562762)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3095948
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
2453	8.5	0.0	0.0	chr5	32580838	32581143	(148957116)	C	AluSc5	SINE/Alu	(3)	306	1	3097166
2257	12.3	10.5	4.0	chr5	32581144	32581319	(148956940)	C	MSTA	LTR/ERVL-MaLR	(228)	200	1	3097165
1914	8.9	9.1	17.8	chr5	33297739	33298188	(148240071)	C	MER48	LTR/ERV1	(0)	407	1	3098120
4795	12.9	4.2	1.7	chr5	33298189	33298338	(148239921)	+	LTR39	LTR/ERV1	630	783	(0)	3098119
2118	17.6	8.2	0.8	chr5	36031244	36031639	(145506620)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3102198
1508	19.5	13.2	0.9	chr5	39605189	39605534	(141932725)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	3107798
1642	17.7	3.2	2.1	chr5	42972100	42972434	(138565825)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3112342
2163	12.8	7.3	0.6	chr5	43068752	43069106	(138469153)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3112480
18	4.1	0.0	0.0	chr5	43556848	43556872	(137981387)	+	(CTC)n	Simple_repeat	1	25	(0)	3113264
2535	10.9	4.4	2.2	chr5	54313478	54313833	(127224426)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3121532
12	21.3	2.5	2.4	chr5	56037558	56037597	(125500662)	+	GA-rich	Low_complexity	1	41	(0)	3124327
13	21.4	2.6	0.0	chr5	56311175	56311212	(125227047)	+	(TCAAT)n	Simple_repeat	1	39	(0)	3124839
17	15.0	4.3	2.1	chr5	57173958	57174003	(124364256)	+	(CTCC)n	Simple_repeat	1	48	(0)	3126300
1724	16.1	15.9	0.6	chr5	57575913	57576274	(123961985)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3126958
18133	16.6	3.1	2.0	chr5	60978717	60980489	(120557770)	+	L1M1	LINE/L1	507	2295	(5270)	3131616
2784	6.8	0.3	0.3	chr5	67490504	67490858	(114047401)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3140902
3909	14.4	1.6	2.0	chr5	77778564	77779200	(103759059)	+	MER41B	LTR/ERV1	1	634	(0)	3157162
330	14.5	2.8	6.8	chr5	77779201	77779234	(103759025)	+	Tigger2b_Pri	DNA/TcMar-Tigger	41	71	(997)	3157161
609	25.9	2.9	5.0	chr5	77779270	77779448	(103758811)	+	MER8	DNA/TcMar-Tigger	63	237	(2)	3157163
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
1968	16.7	10.5	0.8	chr5	80584818	80585203	(100953056)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3161844
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
401	12.3	0.0	0.0	chr5	116086399	116086455	(65451804)	+	Alu	SINE/Alu	6	62	(249)	3207711
2101	11.8	0.0	0.3	chr5	116086464	116086751	(65451508)	C	AluSq2	SINE/Alu	(18)	295	9	3207712
2100	15.5	2.2	0.0	chr5	126355972	126356325	(55181934)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	3221063
36	0.0	0.0	0.0	chr5	132259138	132259168	(49279091)	+	(TG)n	Simple_repeat	1	31	(0)	3229108
13	11.3	4.5	6.5	chr5	132259269	132259312	(49278947)	+	(GCTGCAG)n	Simple_repeat	1	46	(0)	3229109
17	16.5	0.0	0.0	chr5	132259375	132259408	(49278851)	+	(CAG)n	Simple_repeat	1	34	(0)	3229110
2206	9.8	4.5	5.3	chr5	132524885	132525262	(49012997)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3229491
17	13.1	0.0	0.0	chr5	132962795	132962820	(48575439)	+	(T)n	Simple_repeat	1	26	(0)	3230228
2655	11.6	3.0	5.7	chr5	133939655	133940056	(47598203)	+	MSTA	LTR/ERVL-MaLR	1	394	(34)	3231615
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
27	11.1	0.0	0.0	chr5	135028543	135028581	(46509678)	+	(T)n	Simple_repeat	1	39	(0)	3233790
278	35.0	5.7	0.5	chr5	135134317	135134500	(46403759)	+	L3	LINE/CR1	3754	3947	(152)	3233930
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
15	4.1	4.0	0.0	chr5	138465013	138465037	(43073222)	+	(AGGG)n	Simple_repeat	1	26	(0)	3238915
12	26.8	1.8	3.5	chr5	138466948	138467004	(43071255)	+	(CCACCT)n	Simple_repeat	1	58	(0)	3238918
13	6.4	8.6	2.6	chr5	138468080	138468114	(43070145)	+	G-rich	Low_complexity	1	38	(0)	3238920
17	5.0	0.0	0.0	chr5	138468781	138468801	(43069458)	+	(T)n	Simple_repeat	1	21	(0)	3238921
1192	18.0	4.5	0.5	chr5	138469469	138469662	(43068597)	C	AluJb	SINE/Alu	(26)	286	85	3238922
237	16.2	0.0	0.0	chr5	138469763	138469799	(43068460)	C	MER77B	LTR/ERVL	(282)	418	382	3238923
299	27.8	14.2	1.2	chr5	138470322	138470492	(43067767)	C	L2c	LINE/L2	(104)	3283	3087	3238924
40	25.9	2.6	3.1	chr5	138753262	138753416	(42784843)	+	G-rich	Low_complexity	1	159	(0)	3239539
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
1888	13.7	5.8	9.6	chr5	142181840	142182187	(39356072)	+	THE1D	LTR/ERVL-MaLR	1	342	(39)	3245390
13	11.5	12.2	1.8	chr5	142357141	142357189	(39181070)	+	(TCCGCC)n	Simple_repeat	1	55	(0)	3245797
3005	11.6	0.5	0.5	chr5	146581094	146581519	(34956740)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	3252819
2313	12.1	4.4	4.1	chr5	149398911	149399196	(32139063)	C	THE1B	LTR/ERVL-MaLR	(70)	294	1	3257643
2678	11.3	0.0	0.0	chr5	151569171	151569534	(29968725)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3262095
197	28.6	9.5	3.7	chr5	154653888	154653996	(26884263)	C	MIR3	SINE/MIR	(77)	131	16	3267691
285	32.4	12.4	2.9	chr5	154840864	154841038	(26697221)	+	L3b	LINE/CR1	4851	5044	(188)	3268160
1980	12.8	5.8	0.8	chr5	154949976	154950337	(26587922)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3268365
1913	12.4	6.6	5.8	chr5	154969081	154969458	(26568801)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3268398
2587	7.5	5.2	0.3	chr5	159219702	159220047	(22318212)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3275726
1818	16.9	12.4	0.8	chr5	171965801	171966176	(9572083)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	3296372
2163	10.7	4.9	3.6	chr5	171977553	171977911	(9560348)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3296402
250	35.9	7.0	11.9	chr5	171977912	171978256	(9560003)	C	L2c	LINE/L2	(145)	3242	2923	3296401
1997	13.9	16.1	0.6	chr5	172680880	172681240	(8857019)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3297963
2386	12.0	4.1	2.2	chr5	179269302	179269658	(2268601)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3310573
14	15.4	2.6	2.6	chr5	179893786	179893823	(1644436)	+	(ACAGC)n	Simple_repeat	1	39	(0)	3311751
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
2053	19.6	3.8	1.5	chr6	147987	149049	(170656930)	C	TAR1	Satellite/telo	(237)	1087	1	3314432
4054	16.5	3.6	0.8	chr6	2542748	2543449	(168262530)	+	MER72	LTR/ERV1	1	722	(0)	3317590
1983	13.6	5.1	15.9	chr6	2663119	2663601	(168142378)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3317748
190	19.4	7.7	11.1	chr6	2952809	2952889	(167853090)	C	MamRTE1	LINE/RTE-BovB	(1252)	2560	2483	3318154
2204	15.5	6.5	2.0	chr6	3195584	3195991	(167609988)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3318545
2307	14.0	2.4	1.3	chr6	3784913	3785288	(167020691)	+	THE1D	LTR/ERVL-MaLR	2	381	(0)	3319403
2280	10.1	4.2	4.0	chr6	4678556	4678935	(166127044)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3320852
1678	13.5	10.8	6.8	chr6	4704561	4704887	(166101092)	C	THE1D	LTR/ERVL-MaLR	(0)	381	31	3320902
3122	9.8	8.4	0.9	chr6	10834827	10835290	(159970689)	C	LTR22C0	LTR/ERVK	(0)	502	1	3330292
10141	7.0	6.5	6.9	chr6	11932843	11934427	(158871552)	+	LTR12C	LTR/ERV1	2	1579	(0)	3331936
12	25.3	0.0	5.8	chr6	13574519	13574570	(157231409)	+	GA-rich	Low_complexity	1	52	(0)	3334517
12	15.8	0.0	3.3	chr6	13769922	13769951	(157036028)	+	(CCCG)n	Simple_repeat	1	30	(0)	3334869
1187	16.3	1.4	5.3	chr6	13770039	13770265	(157035714)	C	AluJo	SINE/Alu	(8)	304	87	3334870
847	26.2	8.9	4.8	chr6	14397491	14397843	(156408136)	C	LTR88b	LTR/Gypsy?	(468)	369	1	3335925
664	28.1	9.9	7.0	chr6	15211128	15211247	(155594732)	C	L2a	LINE/L2	(593)	2826	2687	3337555
2348	10.1	0.7	0.0	chr6	15211248	15211555	(155594424)	+	AluSc8	SINE/Alu	2	311	(0)	3337558
664	28.1	9.9	7.0	chr6	15211556	15211748	(155594231)	C	L2a	LINE/L2	(733)	2686	2503	3337555
6454	18.2	6.0	1.0	chr6	16216653	16217476	(154588503)	+	LTR12E	LTR/ERV1	1	831	(491)	3339176
3387	14.0	11.9	1.6	chr6	16265461	16266134	(154539845)	+	LTR12	LTR/ERV1	1	753	(73)	3339250
2237	7.0	3.7	1.9	chr6	16267380	16267699	(154538280)	+	LTR12_	LTR/ERV1	363	688	(0)	3339254
2217	10.5	5.2	4.2	chr6	16401831	16402189	(154403790)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	3339476
2296	11.9	3.0	1.1	chr6	16918571	16918927	(153887052)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3340256
4410	18.3	13.3	8.7	chr6	18265625	18266498	(152539481)	C	MER52A	LTR/ERV1	(456)	1299	306	3342730
21	4.2	0.0	0.0	chr6	20575442	20575466	(150230513)	+	(A)n	Simple_repeat	1	25	(0)	3346314
2036	10.2	14.7	0.6	chr6	24589415	24589741	(146216238)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3352199
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
940	15.3	3.7	0.0	chr6	26032506	26032662	(144773317)	+	AluJr4	SINE/Alu	134	296	(16)	3354517
1710	10.9	11.9	1.1	chr6	26104525	26104800	(144701179)	+	AluSz	SINE/Alu	2	311	(1)	3354639
238	17.6	8.3	1.5	chr6	26157243	26157310	(144648669)	C	AluY	SINE/Alu	(15)	287	214	3354736
2150	8.1	0.0	1.4	chr6	26215158	26215474	(144590505)	C	AluSc8	SINE/Alu	(0)	311	2	3354840
951	23.8	2.9	1.2	chr6	26215623	26215862	(144590117)	C	AluJr	SINE/Alu	(47)	265	22	3354841
2234	11.6	0.0	0.7	chr6	26217845	26218147	(144587832)	+	AluSg	SINE/Alu	1	301	(9)	3354843
1955	9.5	2.5	1.8	chr6	26233358	26233640	(144572339)	C	AluSg	SINE/Alu	(20)	290	6	3354868
2503	8.9	0.0	0.0	chr6	27124821	27125113	(143680866)	C	AluY	SINE/Alu	(18)	293	1	3356336
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
3133	26.0	10.2	3.2	chr6	28111534	28113100	(142692879)	C	L1MEi	LINE/L1	(517)	1695	6	3358090
4976	14.1	3.2	2.2	chr6	28220221	28221124	(142584855)	C	MER49	LTR/ERV1	(8)	915	3	3358273
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
27	0.0	6.1	0.0	chr6	28720586	28720618	(142085361)	+	(GTTTT)n	Simple_repeat	1	35	(0)	3359089
2325	8.6	0.0	0.4	chr6	28720619	28720896	(142085083)	C	AluSc8	SINE/Alu	(33)	278	2	3359090
619	1.4	0.0	0.0	chr6	28838444	28838515	(141967464)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359318
2564	4.0	1.0	0.3	chr6	28895821	28896121	(141909858)	C	AluY	SINE/Alu	(6)	305	3	3359410
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
19	14.4	0.0	0.0	chr6	30571118	30571148	(140234831)	+	(A)n	Simple_repeat	1	31	(0)	3361824
10056	7.9	6.8	10.7	chr6	30815215	30816860	(139989119)	C	LTR12C	LTR/ERV1	(0)	1579	3	3362302
9746	11.5	6.1	8.6	chr6	30859284	30860464	(139945515)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	541	3362393
14	7.8	3.7	0.0	chr6	30914010	30914036	(139891943)	+	(GGCGG)n	Simple_repeat	1	28	(0)	3362489
2281	9.0	0.0	0.3	chr6	31703709	31704007	(139101972)	+	AluSz6	SINE/Alu	1	298	(14)	3363746
541	13.1	3.5	0.0	chr6	31704016	31704099	(139101880)	+	FLAM_C	SINE/Alu	1	87	(56)	3363747
7020	10.1	14.7	0.6	chr6	31851877	31853104	(138952875)	+	LTR12C	LTR/ERV1	3	1434	(145)	3364033
14	25.2	2.1	0.0	chr6	32130213	32130259	(138675720)	+	G-rich	Low_complexity	1	48	(0)	3364426
12	17.0	9.2	4.2	chr6	33204797	33204861	(137601118)	+	(CTCTGACC)n	Simple_repeat	1	71	(0)	3365972
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
16	8.3	0.0	0.0	chr6	35728127	35728152	(135077827)	+	(CGGG)n	Simple_repeat	1	26	(0)	3371015
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
452	17.7	14.0	2.1	chr6	36350829	36350972	(134455007)	+	LTR67B	LTR/ERVL	457	620	(0)	3372311
576	25.9	14.3	1.7	chr6	36954120	36954296	(133851683)	C	MIRb	SINE/MIR	(17)	251	49	3373636
1846	10.4	3.5	5.7	chr6	37175979	37176275	(133629704)	C	AluSx1	SINE/Alu	(21)	291	2	3374142
2739	17.5	8.3	11.2	chr6	37497202	37497579	(133308400)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	280	3374762
1698	13.0	3.9	4.2	chr6	37497580	37497864	(133308115)	+	AluSx1	SINE/Alu	9	292	(20)	3374763
2363	13.3	1.3	0.8	chr6	37749412	37749790	(133056189)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3375271
2619	9.3	5.1	0.0	chr6	38673753	38674106	(132131873)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3376767
1718	17.2	5.3	2.9	chr6	40135878	40136225	(130669754)	+	THE1B	LTR/ERVL-MaLR	6	362	(2)	3379001
247	30.3	11.0	6.8	chr6	42017426	42017659	(128788320)	+	L2c	LINE/L2	3076	3320	(67)	3382348
493	30.8	8.0	1.6	chr6	42129339	42129526	(128676453)	+	MIRb	SINE/MIR	20	220	(48)	3382599
1151	23.3	17.9	7.2	chr6	42199452	42199870	(128606109)	+	MLT1G3	LTR/ERVL-MaLR	79	577	(2)	3382776
2630	9.9	0.6	3.0	chr6	43131380	43131752	(127674227)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3384760
2408	6.0	0.3	2.5	chr6	43151519	43151836	(127654143)	C	AluY	SINE/Alu	(0)	311	1	3384796
2169	8.4	0.7	2.0	chr6	43151852	43152149	(127653830)	C	AluY	SINE/Alu	(17)	294	1	3384797
8588	15.2	1.2	0.5	chr6	43391529	43393150	(127412829)	+	HERVP71A-int	LTR/ERV1	18	1762	(5828)	3385256
3470	7.7	0.4	0.0	chr6	43393151	43393604	(127412375)	+	LTR2	LTR/ERV1	8	463	(0)	3385258
1760	16.2	1.0	1.6	chr6	43631477	43631785	(127174194)	C	AluJo	SINE/Alu	(5)	307	1	3385712
351	29.7	11.4	3.3	chr6	43836889	43837041	(126968938)	+	MIRc	SINE/MIR	2	170	(60)	3386100
3613	23.0	7.7	7.7	chr6	44206532	44207162	(126598817)	+	MER34-int	LTR/ERV1	169	910	(7297)	3386767
1985	5.8	7.5	0.4	chr6	44207163	44207436	(126598543)	C	AluY	SINE/Alu	(14)	297	3	3386773
21358	9.9	0.5	0.3	chr6	49887041	49890249	(120915730)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2294	3395008
17	13.2	6.0	7.0	chr6	52362168	52362234	(118443745)	+	(GCTCGG)n	Simple_repeat	1	71	(0)	3398425
1771	17.0	0.6	6.1	chr6	58038265	58038640	(112767339)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3406498
1241	24.0	4.4	5.1	chr6	67879083	67879506	(102926473)	+	MER39	LTR/ERV1	1	603	(104)	3416014
243	14.8	0.0	3.6	chr6	67880940	67880995	(102924984)	+	MER34	LTR/ERV1	422	475	(67)	3416016
1594	21.6	8.4	3.4	chr6	67880996	67881436	(102924543)	C	LTR7C	LTR/ERV1	(6)	465	1	3416017
2195	13.0	3.4	1.6	chr6	68361312	68361685	(102444294)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3416581
2499	10.3	1.6	1.1	chr6	70375578	70375939	(100430040)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3419112
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
1390	11.7	18.6	0.0	chr6	73514694	73514933	(97291046)	C	AluSx4	SINE/Alu	(3)	307	13	3423641
2198	15.3	0.8	2.1	chr6	82095127	82095506	(88710473)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3434638
1811	16.4	13.3	1.1	chr6	84343991	84344365	(86461614)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3437741
259	24.2	12.8	0.0	chr6	89638871	89638965	(81167014)	+	MIRb	SINE/MIR	124	232	(36)	3445116
2258	12.5	1.6	1.1	chr6	100366225	100366596	(70439383)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3458917
2378	8.7	4.9	2.5	chr6	107306183	107306537	(63499442)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3468648
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
2336	19.8	5.6	0.8	chr6	109304290	109304783	(61501196)	C	LTR53	LTR/ERVL	(0)	519	1	3471962
2760	7.7	0.6	0.0	chr6	111061392	111061744	(59744235)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3474955
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
19	9.9	8.3	4.6	chr6	119078776	119078835	(51727144)	+	(CCGCAG)n	Simple_repeat	1	65	(0)	3486086
2100	11.9	4.2	1.4	chr6	120005533	120005899	(50800080)	+	THE1D	LTR/ERVL-MaLR	4	381	(0)	3487300
2650	3.4	0.0	0.7	chr6	122481962	122482259	(48323720)	C	AluYe5	SINE/Alu	(13)	297	2	3490463
1822	13.3	17.5	1.4	chr6	125303535	125303892	(45502087)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3494132
15	21.1	2.2	2.1	chr6	132814792	132814837	(37991142)	+	G-rich	Low_complexity	1	47	(0)	3504376
2178	10.8	7.3	0.8	chr6	133818264	133818619	(36987360)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3505743
2240	13.0	6.9	1.2	chr6	134090081	134090423	(36715556)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3506156
2194	13.7	11.2	1.0	chr6	138396660	138397043	(32408936)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3512905
376	25.6	1.1	0.0	chr6	138773147	138773232	(32032747)	+	MIRb	SINE/MIR	107	193	(75)	3513522
1845	12.1	12.0	2.1	chr6	138857814	138858150	(31947829)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3513686
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
1779	16.3	11.2	2.8	chr6	147660511	147660901	(23145078)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3525720
2101	11.0	1.3	2.0	chr6	148457677	148457982	(22347997)	C	THE1C	LTR/ERVL-MaLR	(0)	375	72	3526977
2220	12.2	3.3	3.0	chr6	148854877	148855239	(21950740)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3527555
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
2107	10.8	0.0	2.7	chr6	150326902	150327196	(20478783)	+	THE1B	LTR/ERVL-MaLR	76	362	(2)	3530041
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
2362	15.7	6.1	1.5	chr6	154623371	154623778	(16182201)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3536722
2595	10.4	1.6	0.5	chr6	157578550	157578926	(13227053)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3541132
2744	8.1	4.0	0.3	chr6	159990228	159990588	(10815391)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3544947
16	9.3	0.0	0.0	chr6	163416049	163416075	(7389904)	+	(G)n	Simple_repeat	1	27	(0)	3549423
708	23.5	4.3	0.6	chr6	163777362	163777541	(7028438)	+	MER58A	DNA/hAT-Charlie	34	220	(4)	3549910
2729	7.7	4.5	0.3	chr6	163817265	163817603	(6988376)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	3549965
1995	12.8	7.9	1.1	chr6	165885180	165885534	(4920445)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3552504
2156	15.1	3.3	2.5	chr6	166206777	166207137	(4598842)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3552931
16	13.2	0.0	0.0	chr6	166223338	166223364	(4582615)	+	(C)n	Simple_repeat	1	27	(0)	3552959
8032	19.9	7.4	4.0	chr6	167980664	167981878	(2824101)	+	L1MB7	LINE/L1	925	2148	(4719)	3555000
1996	13.9	7.2	2.6	chr6	167981879	167982224	(2823755)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	3555004
2458	10.3	1.1	0.8	chr6	169560053	169560406	(1245573)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3556592
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
2091	12.8	14.5	0.5	chr6	169847349	169847716	(958263)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3556902
2027	15.5	7.5	3.9	chr7	810500	810825	(158535148)	C	MSTB	LTR/ERVL-MaLR	(72)	354	2	3558933
23	23.2	3.2	4.2	chr7	1044451	1044543	(158301430)	+	G-rich	Low_complexity	1	96	(0)	3559213
13	14.9	5.1	2.4	chr7	1160308	1160346	(158185627)	+	(CCCGC)n	Simple_repeat	1	41	(0)	3559395
2251	6.0	0.0	0.0	chr7	1374220	1374485	(157971488)	C	AluSq	SINE/Alu	(47)	266	1	3559796
1122	17.5	14.1	16.4	chr7	1374486	1374686	(157971287)	C	MSTA	LTR/ERVL-MaLR	(257)	171	4	3559793
5503	17.9	4.5	1.9	chr7	2022586	2023666	(157322307)	+	L1MCa	LINE/L1	2173	3294	(3027)	3560721
17	15.9	8.2	0.0	chr7	2403446	2403494	(156942479)	+	G-rich	Low_complexity	1	53	(0)	3561339
2180	12.2	7.2	0.9	chr7	4533565	4533904	(154812069)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	3565039
329	30.4	9.8	2.1	chr7	4775036	4775176	(154570797)	+	MIRb	SINE/MIR	109	261	(7)	3565525
339	32.7	2.6	0.0	chr7	5525715	5525827	(153820146)	+	L2c	LINE/L2	3272	3387	(0)	3567253
341	19.8	11.9	0.0	chr7	13508738	13508833	(145837140)	C	MER91B	DNA/hAT-Tip100	(60)	130	22	3578843
1879	14.1	6.8	1.9	chr7	14048046	14048407	(145297566)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3579540
187	27.5	2.8	2.8	chr7	16420560	16420630	(142925343)	+	L2b	LINE/L2	3287	3357	(18)	3582434
1814	16.2	11.7	3.1	chr7	22094825	22095213	(137250760)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	3590198
2639	10.5	0.6	0.3	chr7	25075384	25075746	(134270227)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3594857
2419	12.2	1.6	0.3	chr7	26638162	26638531	(132707442)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3597356
2027	15.1	10.2	1.8	chr7	27361444	27361774	(131984199)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3598369
2447	12.9	0.3	1.1	chr7	30023584	30023950	(129322023)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3602514
12	15.8	0.0	3.3	chr7	30136439	30136468	(129209505)	+	G-rich	Low_complexity	1	30	(0)	3602687
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
2135	15.6	4.0	2.4	chr7	37273212	37273580	(122072393)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3613493
13	27.2	3.4	5.5	chr7	39949956	39950043	(119395930)	+	(CCCAG)n	Simple_repeat	1	91	(0)	3617485
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
1404	14.7	16.1	0.8	chr7	43750390	43750657	(115595316)	C	MSTA	LTR/ERVL-MaLR	(111)	317	1	3623105
416	27.9	8.6	6.3	chr7	43750707	43750977	(115594996)	+	MLT1K	LTR/ERVL-MaLR	291	568	(27)	3623106
2713	12.9	1.4	1.2	chr7	44194068	44194492	(115151481)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3623942
2181	18.2	5.6	0.2	chr7	45689288	45689690	(113656283)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3626231
260	30.2	3.2	9.8	chr7	64891743	64891874	(94454099)	C	MIRc	SINE/MIR	(144)	124	2	3646890
2413	12.4	9.6	4.0	chr7	69534728	69534907	(89811066)	+	MSTA	LTR/ERVL-MaLR	1	188	(240)	3656913
2176	11.2	0.0	2.3	chr7	69534908	69535211	(89810762)	+	AluSx1	SINE/Alu	1	297	(15)	3656914
19	9.2	2.9	0.0	chr7	73521779	73521813	(85824160)	+	(CCCGG)n	Simple_repeat	1	36	(0)	3664803
2156	10.7	0.0	3.6	chr7	73562251	73562558	(85783415)	+	AluSc	SINE/Alu	1	297	(12)	3664917
889	26.7	3.3	4.1	chr7	73562559	73562677	(85783296)	+	L2a	LINE/L2	3143	3249	(177)	3664916
3128	10.0	2.9	0.5	chr7	73562678	73563067	(85782906)	+	MLT2A1	LTR/ERVL	1	401	(43)	3664918
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
22	11.8	0.0	0.0	chr7	73770144	73770180	(85575793)	+	(GACG)n	Simple_repeat	1	37	(0)	3665431
14	25.5	8.1	0.0	chr7	73770213	73770286	(85575687)	+	(GCTGCG)n	Simple_repeat	1	80	(0)	3665432
806	19.4	2.2	5.3	chr7	73886116	73886239	(85459734)	C	MER5A	DNA/hAT-Charlie	(56)	133	6	3665708
194	22.7	0.0	4.3	chr7	73886247	73886292	(85459681)	+	UCON132b	DNA/hAT-Tip100	103	146	(2)	3665710
2182	8.8	0.3	0.3	chr7	74115145	74115440	(85230533)	+	AluSx1	SINE/Alu	5	300	(12)	3666221
11	27.8	0.0	3.9	chr7	74115537	74115587	(85230386)	+	G-rich	Low_complexity	1	51	(0)	3666222
13	28.4	0.9	8.5	chr7	76235311	76235415	(83110558)	+	G-rich	Low_complexity	1	106	(0)	3671662
1977	14.1	5.0	6.0	chr7	87046496	87046880	(72299093)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3686704
2470	11.3	0.8	1.9	chr7	92932508	92932885	(66413088)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3694591
2035	5.2	1.5	3.4	chr7	99471610	99471877	(59874096)	+	AluSx1	SINE/Alu	39	301	(11)	3704801
2275	6.7	1.0	2.3	chr7	99471961	99472126	(59873847)	C	AluSc	SINE/Alu	(13)	296	132	3704802
2115	13.4	5.5	2.0	chr7	99935072	99935422	(59410551)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3705522
2341	6.2	0.0	3.6	chr7	100199774	100200082	(59145891)	+	AluY	SINE/Alu	1	298	(13)	3706057
2046	10.7	0.4	0.0	chr7	100633699	100634007	(58711966)	C	AluSx	SINE/Alu	(0)	312	1	3707008
1852	15.5	6.0	6.6	chr7	101517318	101517683	(57828290)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3709030
2270	12.5	5.2	2.4	chr7	101670232	101670568	(57675405)	C	THE1D	LTR/ERVL-MaLR	(0)	381	31	3709373
2388	11.2	0.0	0.0	chr7	101670569	101670880	(57675093)	+	AluSx	SINE/Alu	1	312	(0)	3709374
2248	9.5	8.4	2.5	chr7	102081317	102081633	(57264340)	+	THE1D	LTR/ERVL-MaLR	1	347	(34)	3710263
1378	21.6	6.1	14.2	chr7	102395578	102395842	(56950131)	C	LTR64	LTR/ERV1	(279)	249	1	3710912
2538	15.8	1.6	0.0	chr7	103617709	103618133	(55727840)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3712976
2517	7.1	0.0	0.0	chr7	104913734	104914042	(54431931)	+	AluY	SINE/Alu	2	310	(1)	3714805
2312	11.7	0.8	6.8	chr7	104914043	104914208	(54431765)	C	THE1B	LTR/ERVL-MaLR	(211)	153	3	3714804
2162	13.9	12.8	0.0	chr7	105134161	105134533	(54211440)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3715194
2180	12.7	1.9	10.2	chr7	105600682	105601093	(53744880)	C	THE1D	LTR/ERVL-MaLR	(0)	381	5	3716217
2870	6.8	0.0	2.5	chr7	105882211	105882508	(53463465)	+	THE1A	LTR/ERVL-MaLR	1	296	(59)	3716739
1699	11.3	4.5	0.4	chr7	106422791	106423064	(52922909)	C	THE1D	LTR/ERVL-MaLR	(0)	381	96	3717563
553	15.7	4.2	0.0	chr7	106598920	106599041	(52746932)	C	MLT1J	LTR/ERVL-MaLR	(407)	155	20	3717814
21	13.2	0.0	0.0	chr7	111770311	111770343	(47575630)	+	(GT)n	Simple_repeat	1	33	(0)	3724820
779	25.1	9.6	0.0	chr7	112502668	112502874	(46843099)	C	MLT1G3	LTR/ERVL-MaLR	(5)	590	362	3725908
331	28.2	0.0	2.3	chr7	112502894	112502980	(46842993)	C	MLT1G3	LTR/ERVL-MaLR	(312)	279	195	3725908
344	16.4	0.0	0.0	chr7	112502970	112503024	(46842949)	C	MLT1G3	LTR/ERVL-MaLR	(535)	60	6	3725908
673	32.9	8.0	4.4	chr7	112503029	112503766	(46842207)	C	L2b	LINE/L2	(233)	3154	2374	3725907
2269	9.0	7.1	1.1	chr7	113173535	113173892	(46172081)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3726817
12231	15.0	2.8	0.9	chr7	119791531	119795658	(39550315)	C	L1M1	LINE/L1	(822)	6899	1375	3735582
1951	10.9	0.7	1.4	chr7	119907220	119907508	(39438465)	C	THE1A	LTR/ERVL-MaLR	(3)	352	66	3735710
2003	13.3	7.3	1.7	chr7	124786076	124786434	(34559539)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3742299
884	20.9	5.2	3.8	chr7	127979032	127979240	(31366733)	C	MER58B	DNA/hAT-Charlie	(5)	336	125	3746469
2878	12.8	10.1	1.4	chr7	127979244	127979742	(31366231)	C	LTR10A	LTR/ERV1	(62)	547	1	3746470
247	20.3	7.2	0.0	chr7	128020313	128020376	(31325597)	C	MER91C	DNA/hAT-Tip100	(33)	107	39	3746513
405	20.6	6.7	1.0	chr7	128020446	128020543	(31325430)	+	MIR3	SINE/MIR	66	169	(39)	3746514
19	9.8	0.0	2.9	chr7	128121620	128121654	(31224319)	+	(AAATT)n	Simple_repeat	1	35	(0)	3746640
12	23.2	0.0	4.5	chr7	128531223	128531266	(30814707)	+	(CCCCACT)n	Simple_repeat	1	44	(0)	3747466
1989	11.4	13.7	0.6	chr7	128683770	128684105	(30661868)	C	MSTA	LTR/ERVL-MaLR	(39)	389	3	3747788
2042	11.0	3.5	2.3	chr7	128773951	128774258	(30571715)	C	AluSx	SINE/Alu	(0)	312	1	3747948
26	18.8	2.9	1.4	chr7	128860480	128860547	(30485426)	+	(CCCTCA)n	Simple_repeat	1	70	(0)	3748060
254	27.7	12.8	0.0	chr7	129055874	129056000	(30289973)	C	MIRb	SINE/MIR	(8)	260	113	3748378
2584	11.8	5.1	3.1	chr7	129186731	129187103	(30158870)	C	MSTA	LTR/ERVL-MaLR	(40)	388	1	3748676
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
1745	15.1	5.2	0.4	chr7	129828109	129828380	(29517593)	+	AluJo	SINE/Alu	26	311	(1)	3749932
1277	12.7	11.9	1.2	chr7	131113802	131114043	(28231930)	C	THE1D	LTR/ERVL-MaLR	(108)	273	2	3752146
2178	14.3	1.9	1.9	chr7	131956356	131956719	(27389254)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3753734
2255	12.2	5.8	2.8	chr7	132420670	132421022	(26924951)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3754379
31	5.9	0.0	0.0	chr7	134293129	134293164	(25052809)	+	(CA)n	Simple_repeat	1	36	(0)	3757230
2230	13.4	5.2	2.8	chr7	135835386	135835763	(23510210)	C	MSTA	LTR/ERVL-MaLR	(38)	390	1	3759673
1928	10.2	0.3	10.6	chr7	136092729	136093088	(23252885)	+	THE1A	LTR/ERVL-MaLR	1	323	(32)	3760130
1970	13.3	5.2	6.7	chr7	138014125	138014511	(21331462)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3762745
1018	12.8	0.0	1.4	chr7	138014512	138014643	(21331330)	C	AluJb	SINE/Alu	(19)	293	163	3762746
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
2086	5.2	10.3	0.0	chr7	139091218	139091486	(20254487)	+	AluY	SINE/Alu	1	300	(11)	3764898
2626	9.9	0.6	1.9	chr7	139977157	139977525	(19368448)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3766506
1369	24.3	3.7	5.2	chr7	140861123	140861561	(18484412)	C	MER101	LTR/ERV1	(32)	442	11	3768300
25017	7.0	0.9	0.3	chr7	141752118	141755274	(17590699)	C	HERVK-int	LTR/ERVK	(3618)	3918	743	3769775
2289	8.0	3.5	0.6	chr7	143192059	143192395	(16153578)	C	THE1B	LTR/ERVL-MaLR	(15)	417	1	3771536
17	21.6	5.6	0.0	chr7	143381260	143381313	(15964660)	+	(CTCC)n	Simple_repeat	1	57	(0)	3771838
1837	13.5	6.6	1.7	chr7	144873489	144873850	(14472123)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3773822
2038	15.3	11.2	3.5	chr7	148868215	148868608	(10477365)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3779502
1883	14.5	3.7	4.7	chr7	148979851	148980140	(10365833)	C	THE1D	LTR/ERVL-MaLR	(43)	338	44	3779755
2185	10.7	3.0	0.0	chr7	148980141	148980431	(10365542)	+	AluSq2	SINE/Alu	2	301	(12)	3779758
1756	21.9	3.2	1.2	chr7	150317854	150318256	(9027717)	C	MER90a	LTR/ERV1	(21)	593	183	3781866
942	23.1	4.8	0.5	chr7	150318254	150318453	(9027520)	+	MLT1C	LTR/ERVL-MaLR	257	465	(2)	3781867
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
12	17.1	2.9	2.8	chr7	150951793	150951827	(8394146)	+	(GCA)n	Simple_repeat	1	36	(0)	3782704
317	34.9	6.5	0.0	chr7	150958718	150958846	(8387127)	C	MIRb	SINE/MIR	(54)	214	77	3782706
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
551	30.6	8.5	0.0	chr7	151133571	151133753	(8212220)	+	MIRb	SINE/MIR	27	226	(42)	3782951
775	16.2	3.9	2.3	chr7	151395318	151395494	(7950479)	+	MLT1B	LTR/ERVL-MaLR	1	180	(210)	3783364
51	0.0	0.0	0.0	chr7	151395495	151395538	(7950435)	+	(AC)n	Simple_repeat	1	44	(0)	3783365
358	25.0	8.9	2.0	chr7	151395543	151395689	(7950284)	+	MLT1B	LTR/ERVL-MaLR	217	374	(16)	3783364
13	25.4	5.4	0.0	chr7	151448277	151448332	(7897641)	+	G-rich	Low_complexity	1	59	(0)	3783457
2651	7.0	5.8	0.0	chr7	151881250	151881592	(7464381)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3784174
2171	12.2	5.2	1.1	chr7	151964340	151964687	(7381286)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	3784334
1638	15.5	17.3	3.0	chr7	152553720	152554084	(6791889)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3785436
2050	23.2	10.1	0.2	chr7	153408696	153409197	(5936776)	+	MLT1F1	LTR/ERVL-MaLR	1	557	(12)	3786890
5717	8.3	4.5	0.5	chr7	154677877	154678665	(4667308)	+	LTR12	LTR/ERV1	1	822	(4)	3788601
2572	13.2	2.9	0.2	chr7	156470731	156471140	(2874833)	+	MSTA	LTR/ERVL-MaLR	4	424	(4)	3790937
461	24.1	9.3	1.8	chr7	157150895	157151075	(2194898)	C	MLT1F	LTR/ERVL-MaLR	(205)	364	156	3791959
388	21.1	0.0	2.2	chr7	157151092	157151183	(2194790)	C	MLT1F	LTR/ERVL-MaLR	(476)	93	4	3791959
1283	29.4	15.2	2.3	chr7	157238240	157239065	(2106908)	C	L2	LINE/L2	(545)	2874	1923	3792110
2271	13.9	0.3	0.0	chr7	158953942	158954294	(391679)	+	THE1B	LTR/ERVL-MaLR	11	364	(0)	3793943
1919	13.0	6.6	3.5	chr8	1803185	1803328	(143335308)	+	THE1D	LTR/ERVL-MaLR	1	161	(220)	3796122
2369	7.1	2.0	0.0	chr8	1803329	1803623	(143335013)	C	AluSq	SINE/Alu	(11)	302	2	3796123
1858	14.8	12.9	3.4	chr8	10057534	10057917	(135080719)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	3807514
2288	14.4	5.4	2.7	chr8	10512811	10513223	(134625413)	+	MSTA	LTR/ERVL-MaLR	4	428	(0)	3808179
389	27.5	2.7	0.9	chr8	10656434	10656543	(134482093)	C	MER94	DNA/hAT-Blackjack	(0)	134	23	3808427
2157	13.7	3.9	2.4	chr8	13141901	13142275	(131996361)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3812207
2046	15.0	11.2	0.8	chr8	15417005	15417387	(129721249)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3815331
970	25.1	0.8	2.3	chr8	18122672	18122936	(127015700)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	124	3819211
1010	18.8	0.0	0.0	chr8	18122940	18123099	(127015537)	C	AluJb	SINE/Alu	(17)	295	136	3819212
2652	8.2	0.6	1.1	chr8	20072590	20072946	(125065690)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3822211
1470	22.6	5.6	9.9	chr8	21509099	21509604	(123629032)	+	MLT1H2	LTR/ERVL-MaLR	2	484	(5)	3824548
5434	25.7	2.6	3.4	chr8	21509612	21511029	(123627607)	+	MLT1H2-int	LTR/ERVL-MaLR	3	1409	(0)	3824548
14	10.6	13.2	1.7	chr8	23494338	23494390	(121644246)	+	(CAGCTGG)n	Simple_repeat	1	60	(0)	3828018
19	19.1	1.3	7.8	chr8	31033715	31033790	(114104846)	+	(GGCGG)n	Simple_repeat	1	77	(0)	3840915
2267	13.5	4.2	0.8	chr8	31207254	31207619	(113931017)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	3841228
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
2700	9.7	0.3	0.3	chr8	37580639	37581002	(107557634)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3850562
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
34	0.0	0.0	2.8	chr8	38151664	38151699	(106986937)	+	(ATAA)n	Simple_repeat	1	36	(0)	3851751
180	29.8	0.0	2.1	chr8	38151710	38151757	(106986879)	C	MER5A	DNA/hAT-Charlie	(142)	47	1	3851748
458	29.6	4.3	0.0	chr8	38151793	38151924	(106986712)	C	MIR3	SINE/MIR	(40)	168	31	3851752
2293	11.5	4.7	2.8	chr8	41406865	41407221	(103731415)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3856932
1807	13.5	8.7	6.5	chr8	41425167	41425325	(103713311)	+	THE1D	LTR/ERVL-MaLR	1	187	(194)	3856968
41	4.8	0.0	0.0	chr8	41425326	41425369	(103713267)	+	(TC)n	Simple_repeat	1	44	(0)	3856969
1807	13.5	8.7	6.5	chr8	41425370	41425538	(103713098)	+	THE1D	LTR/ERVL-MaLR	188	343	(38)	3856968
1460	13.8	1.2	5.2	chr8	42391246	42391514	(102747122)	+	AluJo	SINE/Alu	1	258	(54)	3858711
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
1583	14.6	3.9	1.4	chr8	43093803	43094077	(102044559)	+	AluJb	SINE/Alu	1	282	(30)	3860104
2896	6.5	0.0	0.3	chr8	54161886	54162241	(90976395)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3870625
1626	15.6	8.8	1.5	chr8	92877466	92877791	(52260845)	C	THE1C	LTR/ERVL-MaLR	(0)	375	24	3924440
1983	14.6	13.3	0.8	chr8	93173169	93173542	(51965094)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3924800
2497	10.2	2.1	1.6	chr8	94382607	94382985	(50755651)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3926726
414	26.0	7.4	3.8	chr8	97850002	97850255	(47288381)	+	LTR41B	LTR/ERVL	501	747	(11)	3932575
17	20.0	0.0	0.0	chr8	100721649	100721688	(44416948)	+	G-rich	Low_complexity	1	40	(0)	3937326
1883	11.2	22.1	0.6	chr8	101034680	101035012	(44103624)	+	MSTA	LTR/ERVL-MaLR	1	425	(3)	3938025
2356	13.5	11.4	0.5	chr8	102199318	102199698	(42938938)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3939940
41	0.0	0.0	0.0	chr8	103298774	103298810	(41839826)	+	(CCG)n	Simple_repeat	1	37	(0)	3942079
2022	12.9	4.2	2.7	chr8	104864630	104865003	(40273633)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	3944374
2200	11.0	4.7	1.6	chr8	116804231	116804599	(28334037)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3960633
2283	10.9	4.2	2.1	chr8	119943247	119943619	(25195017)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3965711
2162	13.4	6.4	0.8	chr8	120059601	120059954	(25078682)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3965990
1683	13.0	13.1	4.1	chr8	123251044	123251381	(21887255)	+	MSTA	LTR/ERVL-MaLR	56	428	(0)	3971483
2499	12.0	3.4	0.8	chr8	123834896	123835266	(21303370)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3972638
1614	16.5	5.3	6.0	chr8	124171345	124171724	(20966912)	C	THE1D	LTR/ERVL-MaLR	(0)	381	5	3973208
638	23.3	8.4	4.1	chr8	125163396	125163606	(19975030)	+	MIRc	SINE/MIR	6	225	(43)	3975039
2128	13.5	5.0	0.3	chr8	126325277	126325639	(18812997)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3977257
1889	13.3	9.1	0.9	chr8	126823698	126824031	(18314605)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3978243
184	28.7	0.9	10.7	chr8	127898905	127899025	(17239611)	C	LFSINE_Vert	SINE/tRNA	(280)	179	71	3980357
290	30.6	5.0	4.1	chr8	127960208	127960333	(17178303)	C	MIR3	SINE/MIR	(52)	156	36	3980488
2737	7.6	0.3	0.3	chr8	129618026	129618380	(15520256)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3983468
1841	13.0	5.0	6.7	chr8	133159661	133160048	(11978588)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3989889
1966	11.7	5.5	9.3	chr8	133379753	133380107	(11758529)	C	THE1D	LTR/ERVL-MaLR	(32)	349	1	3990328
2151	20.6	4.6	0.7	chr8	134719877	134720335	(10418301)	+	MLT1H2	LTR/ERVL-MaLR	6	483	(6)	3992752
1413	19.2	1.5	2.2	chr8	140338469	140338740	(4799896)	+	MLT1B	LTR/ERVL-MaLR	1	270	(120)	4001772
308	26.6	1.2	0.0	chr8	140339120	140339198	(4799438)	+	MLT1B	LTR/ERVL-MaLR	226	305	(85)	4001772
653	16.4	7.3	12.8	chr8	143095503	143095733	(2042903)	+	MSTA	LTR/ERVL-MaLR	90	344	(37)	4005716
592	23.6	13.2	8.9	chr8	143245688	143245933	(1892703)	+	MLT1E1	LTR/ERVL-MaLR	366	623	(31)	4005972
13	23.2	0.0	5.9	chr8	144530282	144530332	(608304)	+	G-rich	Low_complexity	1	51	(0)	4007708
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
411	15.9	5.8	2.3	chr8	144853539	144853640	(284996)	C	LTR54	LTR/ERV1	(391)	107	1	4008204
2376	12.7	0.8	1.6	chr9	3984717	3985083	(134409634)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4014358
2418	12.4	2.4	2.1	chr9	4544733	4545112	(133849605)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4015226
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
339	36.8	3.6	2.6	chr9	36006610	36006799	(102387918)	C	L3	LINE/CR1	(127)	3972	3781	4059771
1219	8.5	0.0	2.4	chr9	37592779	37592942	(100801775)	+	AluSx	SINE/Alu	125	284	(28)	4062992
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
11	13.8	2.8	5.4	chr9	70258925	70258960	(68135757)	+	(GCGCGA)n	Simple_repeat	1	37	(0)	4082831
1881	16.0	6.1	1.6	chr9	76680668	76681030	(61713687)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	4092998
2194	13.8	10.3	1.3	chr9	84070588	84070976	(54323741)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4104026
1925	11.4	10.0	3.7	chr9	94717636	94717990	(43676727)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	4120170
34	23.3	2.2	5.6	chr9	95317200	95317338	(43077379)	+	(CCCGCCT)n	Simple_repeat	1	142	(0)	4121018
2098	15.6	3.3	2.5	chr9	98047027	98047387	(40347330)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4125678
404	35.2	10.6	4.2	chr9	98056160	98056396	(40338321)	C	MIRb	SINE/MIR	(1)	267	14	4125691
16	18.4	7.0	1.6	chr9	98056577	98056633	(40338084)	+	(CCCCG)n	Simple_repeat	1	61	(0)	4125692
3029	17.9	1.0	0.2	chr9	101840667	101841181	(36553536)	C	LTR53	LTR/ERVL	(0)	519	1	4132282
20	24.4	2.6	3.8	chr9	105656220	105656297	(32738420)	+	(GGC)n	Simple_repeat	1	80	(0)	4137861
342	21.6	3.4	0.0	chr9	108094355	108094465	(30300252)	C	MIRb	SINE/MIR	(91)	177	64	4142184
1842	14.6	12.9	1.1	chr9	108842939	108843312	(29551405)	C	MSTA	LTR/ERVL-MaLR	(3)	425	1	4143388
2074	11.8	5.8	2.2	chr9	114684132	114684496	(23710221)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	4154224
222	27.0	6.3	7.5	chr9	116465108	116465187	(21929530)	C	MIRb	SINE/MIR	(188)	80	2	4157442
37	33.8	1.4	3.7	chr9	122093034	122093247	(16301470)	+	(CCG)n	Simple_repeat	1	217	(0)	4168287
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
458	26.6	0.9	0.0	chr9	124202374	124202482	(14192235)	+	MIR3	SINE/MIR	44	153	(55)	4172136
1776	8.9	6.6	5.2	chr9	125235208	125235476	(13159241)	C	AluSc	SINE/Alu	(13)	296	24	4174229
411	23.4	0.0	1.3	chr9	125236002	125236078	(13158639)	+	AluJr	SINE/Alu	137	212	(100)	4174230
16	0.0	0.0	0.0	chr9	125236083	125236099	(13158618)	+	(A)n	Simple_repeat	1	17	(0)	4174231
19	14.9	0.0	0.0	chr9	127424461	127424497	(10970220)	+	(GTTGCCA)n	Simple_repeat	1	37	(0)	4178181
1863	15.8	6.6	0.0	chr9	127864767	127865051	(10529666)	+	AluSz	SINE/Alu	1	305	(7)	4179203
236	32.9	13.7	1.2	chr9	127865098	127865340	(10529377)	+	L2c	LINE/L2	2918	3195	(192)	4179204
7998	7.1	0.6	1.8	chr9	128181336	128182354	(10212363)	+	LTR13	LTR/ERVK	1	1007	(0)	4179912
2295	8.0	0.7	0.0	chr9	128503610	128503895	(9890822)	+	AluSx1	SINE/Alu	1	288	(24)	4180693
1963	16.6	8.7	1.1	chr9	128503896	128504231	(9890486)	C	LTR42	LTR/ERVL	(125)	370	6	4180692
290	37.5	10.0	0.9	chr9	129246744	129246969	(9147748)	+	L3	LINE/CR1	3224	3472	(627)	4182413
22	19.5	1.6	3.2	chr9	129402484	129402545	(8992172)	+	(CCTCCT)n	Simple_repeat	1	63	(0)	4182736
499	34.2	1.1	2.1	chr9	129863365	129863555	(8531162)	C	MIRb	SINE/MIR	(19)	249	61	4183807
358	31.6	1.5	5.3	chr9	129867694	129867871	(8526846)	+	MIRb	SINE/MIR	15	188	(80)	4183815
23	3.7	0.0	0.0	chr9	129910848	129910875	(8483842)	+	(TG)n	Simple_repeat	1	28	(0)	4183882
2455	11.5	2.2	1.9	chr9	130397055	130397417	(7997300)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4184935
2199	13.5	9.8	1.0	chr9	132082158	132082547	(6312170)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4188178
8215	6.1	1.1	0.1	chr9	133040778	133041774	(5352943)	+	LTR13	LTR/ERVK	1	1007	(0)	4189968
1714	12.5	16.8	0.6	chr9	134445050	134445402	(3949315)	+	MSTA	LTR/ERVL-MaLR	7	428	(0)	4192020
2547	8.9	4.7	0.9	chr9	134872477	134872826	(3521891)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4192491
1922	25.9	2.6	2.4	chr9	134872827	134873199	(3521518)	C	L1MEc	LINE/L1	(569)	5783	5409	4192490
2079	10.0	5.5	2.7	chr9	135911208	135911545	(2483172)	C	THE1B	LTR/ERVL-MaLR	(0)	364	17	4193773
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
20	21.8	5.4	4.1	chr9	136847354	136847445	(1547272)	+	(GCCCA)n	Simple_repeat	1	97	(0)	4194873
14	7.5	3.3	3.2	chr9	136975825	136975854	(1418863)	+	(CCAG)n	Simple_repeat	1	31	(0)	4195071
2218	11.9	0.3	0.3	chrX	685160	685495	(155355400)	+	THE1B	LTR/ERVL-MaLR	1	336	(28)	4359163
791	28.9	6.4	3.3	chrX	16771508	16771808	(139269087)	+	AluJb	SINE/Alu	2	312	(0)	4386663
2559	9.2	0.6	0.3	chrX	18871223	18871559	(137169336)	+	THE1B	LTR/ERVL-MaLR	27	364	(0)	4390320
11	32.6	0.0	7.3	chrX	23667578	23667673	(132373222)	+	(CGCTGC)n	Simple_repeat	1	96	(0)	4397766
2202	14.2	1.6	1.1	chrX	24297252	24297613	(131743282)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4399256
2153	14.4	10.7	2.0	chrX	40303712	40304101	(115736794)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4422192
20	13.7	0.0	0.0	chrX	41333712	41333743	(114707152)	+	(A)n	Simple_repeat	1	32	(0)	4424166
520	20.2	1.6	7.0	chrX	41350640	41350768	(114690127)	+	FLAM_C	SINE/Alu	1	122	(21)	4424181
2124	13.4	1.9	3.5	chrX	46172403	46172772	(109868123)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4431730
1914	15.5	12.6	0.8	chrX	46626581	46626957	(109413938)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4432487
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
2663	9.1	3.2	0.6	chrX	70209605	70209969	(85830926)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4459311
4734	3.8	4.3	0.0	chrX	103101559	103102113	(52938782)	+	LTR19B	LTR/ERV1	1	580	(0)	4498060
21	13.9	0.0	0.0	chrX	103687084	103687116	(52353779)	+	(T)n	Simple_repeat	1	33	(0)	4498992
13	18.2	0.0	0.0	chrX	120561247	120561277	(35479618)	+	(CGCTCC)n	Simple_repeat	1	31	(0)	4523168
2337	10.8	0.8	0.6	chrX	121191855	121192208	(34848687)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4524103
13	16.3	2.8	2.7	chrX	130179784	130179819	(25861076)	+	(TGA)n	Simple_repeat	1	37	(0)	4536100
2434	12.7	5.0	0.8	chrX	134845977	134846341	(21194554)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4543483
2368	10.4	1.9	2.7	chrX	138990424	138990790	(17050105)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4550025
243	25.4	5.6	1.5	chrX	147981029	147981096	(8059799)	C	L2b	LINE/L2	(1)	3374	3304	4562674
14	14.2	3.2	0.0	chrX	150898644	150898674	(5142221)	+	GA-rich	Low_complexity	1	32	(0)	4566674
12	24.2	2.6	0.0	chrX	150983317	150983355	(5057540)	+	(GCTGC)n	Simple_repeat	1	40	(0)	4566879
20	34.4	0.0	0.0	chrX	152733618	152733693	(3307202)	+	(ATCCCC)n	Simple_repeat	1	76	(0)	4569318
14	20.9	0.0	5.5	chrX	153724559	153724631	(2316264)	+	G-rich	Low_complexity	1	68	(0)	4570654
744	3.8	1.1	2.5	chrX	156029887	156030800	(10095)	+	(TTAGGG)n	Simple_repeat	1	924	(0)	4574089