15	15.5	7.0	0.0	chr1	1116237	1116279	(247840143)	+	G-rich	Low_complexity	1	46	(0)	1382
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
13	21.0	3.2	6.2	chr1	2195398	2195459	(246760963)	+	(CTGGCCC)n	Simple_repeat	1	64	(0)	2984
2111	14.5	11.2	1.6	chr1	2624743	2625128	(246331294)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3409
697	31.7	11.3	1.7	chr1	6032679	6033195	(242923227)	+	L1MC4	LINE/L1	7342	7914	(128)	7591
112	29.5	1.2	0.0	chr1	6033196	6033515	(242922907)	+	(TGTGTG)n	Simple_repeat	1	324	(0)	7592
13	4.2	8.0	0.0	chr1	6236099	6236123	(242720299)	+	(CCCG)n	Simple_repeat	1	27	(0)	7886
19	9.1	0.0	5.1	chr1	11012279	11012317	(237944105)	+	(GCCCC)n	Simple_repeat	1	39	(0)	16858
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
38	11.2	0.0	0.0	chr1	12047247	12047306	(236909116)	+	(AC)n	Simple_repeat	1	60	(0)	19035
41	22.4	0.0	0.0	chr1	12053857	12053938	(236902484)	+	(TG)n	Simple_repeat	1	82	(0)	19052
841	25.7	4.1	1.9	chr1	15976264	15976536	(232979886)	C	MIRb	SINE/MIR	(1)	267	2	26437
1535	0.0	0.0	0.0	chr1	16514122	16514285	(232442137)	C	U1	snRNA	(1)	164	1	27677
63	30.7	0.6	0.0	chr1	20165669	20165842	(228790580)	+	(TG)n	Simple_repeat	1	175	(0)	35217
430	27.5	11.9	1.1	chr1	22025945	22026124	(226930298)	+	MIRb	SINE/MIR	58	259	(9)	39249
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
1854	13.5	4.4	1.7	chr1	23917147	23917435	(225038987)	+	AluJo	SINE/Alu	2	298	(14)	43702
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
857	19.5	0.0	0.0	chr1	24954470	24954618	(224001804)	+	MER45A	DNA/hAT-Tip100	24	172	(6)	46068
265	30.0	0.4	7.0	chr1	25032109	25032276	(223924146)	+	MIR3	SINE/MIR	22	168	(40)	46233
218	29.2	11.1	1.0	chr1	25820184	25820280	(223136142)	C	MIR1_Amn	SINE/MIR	(94)	136	29	47892
542	34.7	8.9	0.5	chr1	27884080	27884296	(221072126)	C	MIR	SINE/MIR	(24)	238	2	52749
651	26.2	7.2	0.1	chr1	30868929	30869138	(218087284)	C	MIRb	SINE/MIR	(34)	234	5	59275
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
196	29.3	0.0	0.0	chr1	34360839	34360896	(214595526)	C	MIRb	SINE/MIR	(46)	222	165	66677
2145	12.7	11.9	3.8	chr1	38493324	38493675	(210462747)	+	MSTA	LTR/ERVL-MaLR	1	395	(33)	74760
367	25.5	14.8	3.0	chr1	41353618	41353783	(207602639)	C	MIRc	SINE/MIR	(61)	207	19	80651
18	0.0	0.0	0.0	chr1	41751325	41751344	(207205078)	+	(T)n	Simple_repeat	1	20	(0)	81370
19	19.0	0.0	0.0	chr1	43358713	43358754	(205597668)	+	(GCCCC)n	Simple_repeat	1	42	(0)	84214
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
234	23.1	1.0	11.9	chr1	45339770	45339887	(203616535)	+	L2c	LINE/L2	3059	3163	(212)	87767
286	20.3	4.5	0.0	chr1	46321478	46321541	(202634881)	C	L1ME2z	LINE/L1	(30)	6414	6348	89801
1242	14.1	2.6	3.1	chr1	46321554	46321780	(202634642)	+	THE1B	LTR/ERVL-MaLR	1	226	(138)	89802
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
30	28.9	1.2	0.0	chr1	86471068	86471150	(162485272)	+	(AC)n	Simple_repeat	1	84	(0)	155655
2266	5.5	0.0	9.2	chr1	92975239	92975564	(155980858)	C	AluY	SINE/Alu	(15)	296	1	165453
539	36.4	5.3	4.4	chr1	92975742	92976172	(155980250)	+	L2b	LINE/L2	2940	3374	(1)	165454
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
2453	12.5	5.9	0.0	chr1	103783766	103784166	(145172256)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	180940
15	5.6	0.0	0.0	chr1	111593006	111593024	(137363398)	+	(AG)n	Simple_repeat	1	19	(0)	191763
13	23.4	6.0	0.0	chr1	114511170	114511219	(134445203)	+	(GAGC)n	Simple_repeat	1	53	(0)	196725
18	14.9	2.6	2.5	chr1	114511211	114511249	(134445173)	+	(GC)n	Simple_repeat	1	40	(0)	196726
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
694	24.2	5.7	2.9	chr1	116504850	116505053	(132451369)	+	MIRb	SINE/MIR	40	249	(19)	199808
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
631	21.4	3.6	3.0	chr1	144523858	144524021	(104432401)	C	U1	snRNA	(0)	165	1	209540
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1188	16.7	3.4	15.8	chr1	145991760	145992094	(102964328)	+	AluJo	SINE/Alu	2	293	(19)	211891
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
218	32.5	4.5	6.0	chr1	151791539	151791672	(97164750)	+	L2b	LINE/L2	3241	3372	(3)	221901
189	28.7	5.0	2.1	chr1	154962654	154962749	(93993673)	+	MIRc	SINE/MIR	170	268	(0)	227115
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
18	26.1	0.0	4.6	chr1	156282735	156282799	(92673623)	+	(CCG)n	Simple_repeat	1	65	(0)	229845
31	23.7	0.0	0.0	chr1	156660382	156660448	(92295974)	+	(GT)n	Simple_repeat	1	67	(0)	230532
23	21.7	2.5	3.7	chr1	160262403	160262482	(88693940)	+	(CCACCG)n	Simple_repeat	1	82	(0)	235489
2351	12.4	1.1	7.5	chr1	160712765	160713081	(88243341)	C	THE1C	LTR/ERVL-MaLR	(67)	308	1	236145
27	15.7	0.0	0.0	chr1	160796066	160796116	(88160306)	+	(ACACAT)n	Simple_repeat	1	51	(0)	236278
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
1907	15.0	10.8	3.5	chr1	174204636	174205029	(74751393)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	256903
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
851	21.8	9.5	3.0	chr1	181128017	181128213	(67828209)	+	AluJr	SINE/Alu	1	211	(101)	267518
2483	11.1	1.6	0.8	chr1	181542400	181542771	(67413651)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	268148
383	30.7	9.7	5.8	chr1	182616033	182616340	(66340082)	C	MLT1N2	LTR/ERVL-MaLR	(31)	531	211	269756
18	23.7	0.0	6.8	chr1	183472319	183472363	(65484059)	+	(CCCTCT)n	Simple_repeat	1	70	(0)	271188
17	18.8	0.0	0.0	chr1	183472364	183472394	(65484028)	+	(C)n	Simple_repeat	1	31	(0)	271189
758	32.3	10.0	6.1	chr1	192609044	192609521	(56346901)	C	MLT1N2	LTR/ERVL-MaLR	(52)	510	12	283627
46	21.2	3.1	4.8	chr1	201955119	201955207	(47001215)	+	A-rich	Low_complexity	71	157	(0)	296924
32	25.1	0.0	0.0	chr1	202616467	202616536	(46339886)	+	(CA)n	Simple_repeat	1	70	(0)	298185
233	29.7	7.5	2.6	chr1	202616573	202616686	(46339736)	+	L2-3_Crp	LINE/L2	745	864	(1232)	298186
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
661	2.7	0.0	0.0	chr1	204507028	204507102	(44449320)	C	tRNA-Lys-AAA	tRNA	(1)	75	1	301659
233	26.9	1.9	0.0	chr1	206050811	206050862	(42905560)	C	MIR3	SINE/MIR	(62)	146	94	304492
13	13.9	2.9	2.9	chr1	206051082	206051115	(42905307)	+	(TCTTCC)n	Simple_repeat	1	35	(0)	304493
208	29.9	11.1	4.2	chr1	221776883	221777074	(27179348)	+	MIRc	SINE/MIR	42	248	(20)	328173
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
35	36.6	0.0	3.0	chr1	226712966	226712979	(22243443)	+	(CACACA)n	Simple_repeat	1	166	(0)	336325
37	38.0	0.0	0.7	chr1	226712980	226713131	(22243291)	+	(TACA)n	Simple_repeat	1	152	(0)	336326
2268	10.6	5.3	1.6	chr1	234695977	234696342	(14260080)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	348296
12	15.1	0.0	9.1	chr1	234961910	234961953	(13994469)	+	(GCACAGT)n	Simple_repeat	1	44	(0)	348741
16	19.4	0.0	5.0	chr1	234962043	234962082	(13994340)	+	(CA)n	Simple_repeat	1	40	(0)	348742
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
2186	13.4	11.0	0.5	chr1	244957553	244957935	(3998487)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	365156
608	0.0	0.0	21.5	chr1	248873855	248873961	(82461)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	370918
13	25.1	6.9	1.3	chr10	931544	931615	(132865807)	+	(GGCGCG)n	Simple_repeat	1	77	(0)	372033
197	21.8	6.9	2.5	chr10	1232266	1232965	(132564457)	+	(GT)n	Simple_repeat	1	748	(0)	372405
2322	13.5	7.5	1.0	chr10	7337338	7337735	(126459687)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	380863
1877	14.5	13.1	4.6	chr10	13391161	13391503	(120405919)	+	MSTA	LTR/ERVL-MaLR	1	395	(33)	390705
4754	23.0	2.7	1.1	chr10	26334604	26335915	(107461507)	C	L1M3f	LINE/L1	(4981)	2584	1251	411458
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
884	20.0	4.0	0.0	chr10	31701914	31702103	(102095319)	+	MLT-int	LTR/ERVL-MaLR	32	229	(1506)	420619
1714	15.4	13.6	0.9	chr10	31702104	31702418	(102095004)	+	MSTA	LTR/ERVL-MaLR	68	428	(0)	420620
268	28.7	4.9	1.4	chr10	45594285	45594422	(88203000)	C	MIR3	SINE/MIR	(18)	190	48	436270
200	24.8	20.4	3.2	chr10	50508327	50508451	(83288971)	+	MIRb	SINE/MIR	7	158	(110)	443456
1164	17.7	1.8	3.1	chr10	60236804	60237030	(73560392)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	456766
977	21.3	3.9	8.6	chr10	63355160	63355508	(70441914)	C	L1MD2	LINE/L1	(1)	6358	6027	461641
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
58	7.6	0.0	1.2	chr10	67849220	67849359	(65948063)	+	(GGAGG)n	Simple_repeat	1	138	(0)	468032
594	29.6	10.9	4.2	chr10	69841510	69842046	(63955376)	C	L2b	LINE/L2	(0)	3375	2795	472360
1978	15.9	4.9	3.6	chr10	69842047	69842405	(63955017)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	472361
369	25.8	5.7	7.0	chr10	72297515	72297656	(61499766)	+	MIRb	SINE/MIR	107	246	(22)	476989
12	9.2	0.0	4.0	chr10	73874462	73874486	(59922936)	+	(GCGG)n	Simple_repeat	1	25	(0)	480061
37	21.8	4.0	3.1	chr10	73874612	73874736	(59922686)	+	(CCCCG)n	Simple_repeat	1	130	(0)	480062
16	0.0	0.0	0.0	chr10	78029613	78029630	(55767792)	+	(T)n	Simple_repeat	1	18	(0)	487025
985	14.4	0.0	0.0	chr10	87095785	87095930	(46701492)	+	FRAM	SINE/Alu	1	146	(30)	500705
701	29.0	2.9	2.9	chr10	88991924	88992161	(44805261)	C	MIRb	SINE/MIR	(16)	252	15	503687
2279	10.6	0.0	0.3	chr10	92101625	92101925	(41695497)	+	AluSz	SINE/Alu	1	300	(12)	508391
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
2505	11.8	2.4	0.5	chr10	100109631	100110004	(33687418)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	522747
15	0.0	0.0	0.0	chr10	100228977	100228993	(33568429)	+	(GC)n	Simple_repeat	1	17	(0)	522978
38	0.0	0.0	0.0	chr10	100228994	100229026	(33568396)	+	(CA)n	Simple_repeat	1	33	(0)	522979
18	28.7	1.6	1.6	chr10	100229115	100229175	(33568247)	+	(CA)n	Simple_repeat	1	62	(0)	522980
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
292	25.4	6.2	3.9	chr10	102056410	102056536	(31740886)	+	L1ME4b	LINE/L1	360	489	(403)	526188
36	20.6	3.5	3.4	chr10	102743955	102744068	(31053354)	+	GA-rich	Low_complexity	1	118	(0)	527500
13	9.1	0.0	3.9	chr10	102918287	102918312	(30879110)	+	(CTCC)n	Simple_repeat	1	26	(0)	527858
266	24.6	3.2	0.0	chr10	110511822	110511882	(23285540)	+	MIR3	SINE/MIR	115	177	(31)	539660
1952	14.9	5.3	1.7	chr10	110613296	110613656	(23183766)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	539861
1986	10.9	13.3	3.8	chr10	114722148	114722491	(19074931)	C	MSTA	LTR/ERVL-MaLR	(46)	382	1	546400
13	24.1	4.8	3.1	chr10	121927973	121928034	(11869388)	+	(GCC)n	Simple_repeat	1	65	(0)	557959
12	22.3	8.8	0.0	chr10	121928210	121928266	(11869156)	+	G-rich	Low_complexity	1	62	(0)	557960
405	21.4	7.6	2.7	chr10	121974358	121974506	(11822916)	C	MER5A	DNA/hAT-Charlie	(1)	188	32	558053
18	25.7	0.0	0.0	chr10	123008737	123008784	(10788638)	+	(GCC)n	Simple_repeat	1	48	(0)	559613
563	35.0	0.9	0.2	chr10	124153530	124155709	(9641713)	+	(CA)n	Simple_repeat	1	2199	(0)	561446
293	28.6	13.5	4.8	chr10	132319993	132320201	(1477221)	+	L1ME3F	LINE/L1	5843	6072	(171)	571522
1624	24.1	6.2	1.4	chr10	132320257	132320762	(1476660)	C	MER67A	LTR/ERV1	(1)	542	11	571523
196	27.2	4.2	4.2	chr11	575331	575449	(134511173)	+	L2	LINE/L2	2578	2696	(723)	573580
1967	12.6	2.1	1.2	chr11	1264402	1264730	(133821892)	C	THE1D	LTR/ERVL-MaLR	(0)	381	50	574419
12	17.0	0.0	5.4	chr11	6402853	6402889	(128683733)	+	(GGTGAG)n	Simple_repeat	1	37	(0)	581268
13	18.1	0.0	3.0	chr11	6647350	6647382	(128439240)	+	GA-rich	Low_complexity	1	33	(0)	581604
36	5.3	0.0	0.0	chr11	9601886	9601925	(125484697)	+	(CA)n	Simple_repeat	1	40	(0)	586162
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
19	28.6	3.5	1.1	chr11	22829842	22829927	(112256695)	+	(GCCCC)n	Simple_repeat	1	89	(0)	607508
1900	13.2	8.7	1.4	chr11	26522940	26523292	(108563330)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	612604
2162	19.4	6.8	1.4	chr11	26523293	26523687	(108562935)	C	MER67C	LTR/ERV1	(265)	446	2	612603
17	26.8	3.8	2.4	chr11	34052227	34052305	(101034317)	+	(GCGCCC)n	Simple_repeat	1	82	(0)	624603
272	10.5	0.0	0.0	chr11	43869012	43869049	(91217573)	C	U2	snRNA	(150)	38	1	639113
928	23.7	9.7	8.1	chr11	43869174	43869518	(91217104)	+	MLT1H	LTR/ERVL-MaLR	1	351	(198)	639114
180	24.7	6.1	7.2	chr11	44626422	44626504	(90460118)	+	MIR3	SINE/MIR	3	84	(124)	640504
251	25.0	2.6	1.3	chr11	44862253	44862329	(90224293)	+	Charlie15b	DNA/hAT-Charlie	982	1059	(2)	640999
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
17	22.2	0.0	0.0	chr11	47767169	47767210	(87319412)	+	(GTCCGG)n	Simple_repeat	1	42	(0)	646695
20	12.1	0.0	0.0	chr11	47767335	47767370	(87319252)	+	(GGGCGCT)n	Simple_repeat	1	36	(0)	646696
262	34.0	5.4	5.4	chr11	58577886	58578106	(76508516)	C	L2b	LINE/L2	(4)	3371	3151	655685
290	27.8	8.9	8.9	chr11	60389175	60389320	(74697302)	C	L2c	LINE/L2	(0)	3387	3242	658291
240	29.2	0.0	1.5	chr11	60906807	60906872	(74179750)	C	MER5A	DNA/hAT-Charlie	(3)	186	122	659082
3104	13.4	2.1	1.3	chr11	60910061	60910233	(74176389)	+	LTR45	LTR/ERV1	354	525	(0)	659090
317	13.3	0.0	0.0	chr11	60910234	60910278	(74176344)	C	MER39	LTR/ERV1	(661)	46	2	659092
467	31.3	11.7	4.8	chr11	60910389	60910807	(74175815)	+	L2a	LINE/L2	2973	3424	(2)	659087
18	13.6	4.9	0.0	chr11	61061569	61061614	(74025008)	+	(CCCACC)n	Simple_repeat	1	48	(0)	659425
22	27.2	3.5	4.2	chr11	61161308	61161421	(73925201)	+	(GCC)n	Simple_repeat	1	118	(0)	659603
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
13	8.5	4.0	0.0	chr11	65500555	65500579	(69586043)	+	(GAAG)n	Simple_repeat	1	26	(0)	667664
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
186	25.0	4.2	1.4	chr11	67081518	67081586	(68005036)	C	MIR3	SINE/MIR	(114)	94	24	670895
233	27.2	5.1	0.0	chr11	67081787	67081884	(68004738)	C	MIRc	SINE/MIR	(82)	148	42	670896
116	36.4	0.7	0.5	chr11	67649524	67649951	(67436671)	+	(GT)n	Simple_repeat	1	431	(0)	672032
256	25.0	8.3	0.0	chr11	67649961	67650048	(67436574)	+	MIR3	SINE/MIR	46	141	(67)	672033
340	31.3	7.1	6.4	chr11	68077555	68077989	(67008633)	C	L2a	LINE/L2	(0)	3426	2917	672713
181	31.0	1.2	3.5	chr11	68077972	68078058	(67008564)	C	L2a	LINE/L2	(1055)	2364	2280	672713
2480	12.4	2.2	1.9	chr11	69213431	69213793	(65872829)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	674714
1079	24.7	9.3	9.7	chr11	69213794	69213901	(65872721)	+	MLT1C	LTR/ERVL-MaLR	361	467	(0)	674713
2322	12.9	3.7	0.0	chr11	70314794	70315158	(64771464)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	676679
2515	11.9	2.8	1.4	chr11	71540901	71541259	(63545363)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	678412
20	28.3	1.2	3.5	chr11	71929056	71929062	(63157560)	+	(GTGGAG)n	Simple_repeat	1	12	(75)	678991
15	22.5	0.0	2.3	chr11	71929063	71929105	(63157517)	+	(TGG)n	Simple_repeat	1	43	(0)	678992
20	28.3	1.2	3.5	chr11	71929106	71929141	(63157481)	+	(GTGGAG)n	Simple_repeat	13	87	(0)	678991
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
17	24.0	3.3	1.6	chr11	73761468	73761528	(61325094)	+	G-rich	Low_complexity	1	63	(0)	682609
180	28.8	16.5	2.6	chr11	76444188	76444301	(58642321)	+	MIRb	SINE/MIR	121	253	(15)	688049
1669	16.6	12.0	2.1	chr11	90251017	90251397	(44835225)	+	MSTA	LTR/ERVL-MaLR	3	426	(2)	711215
2345	13.7	2.1	0.5	chr11	110019715	110020082	(25066540)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	739129
2229	11.2	6.6	1.1	chr11	115926229	115926588	(19160034)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	748442
2236	12.1	2.9	4.2	chr11	116690639	116690980	(18395642)	C	THE1C	LTR/ERVL-MaLR	(32)	343	1	749762
1963	13.2	6.8	1.7	chr11	123659978	123660338	(11426284)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	761946
13	13.2	6.1	0.0	chr11	124673756	124673788	(10412834)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	763397
391	10.0	8.4	0.8	chr11	133901789	133902587	(1184035)	+	(CA)n	Simple_repeat	1	866	(0)	776518
2350	8.0	0.3	16.6	chr12	1080491	1080912	(132194397)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	780058
15	8.7	0.0	0.0	chr12	4136122	4136146	(129139163)	+	(TTTC)n	Simple_repeat	1	25	(0)	785003
213	31.8	9.3	0.0	chr12	6335971	6336058	(126939251)	+	L3b	LINE/CR1	4950	5046	(186)	788500
13	16.3	0.0	5.3	chr12	6852108	6852145	(126423164)	+	GA-rich	Low_complexity	1	38	(0)	789515
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
3219	9.2	3.7	0.5	chr12	9364148	9364592	(123910717)	C	LTR46	LTR/ERV1	(0)	460	1	793743
2283	18.2	8.8	2.8	chr12	9364593	9365057	(123910252)	C	MER101B	LTR/ERV1	(69)	501	3	793742
2248	9.5	1.4	1.4	chr12	9650527	9650822	(123624487)	+	AluY	SINE/Alu	1	296	(15)	794134
267	29.0	4.5	0.0	chr12	9650944	9651050	(123624259)	C	MER92A	LTR/ERV1	(299)	113	2	794135
2312	12.1	5.9	1.0	chr12	9651345	9651744	(123623565)	C	MSTA	LTR/ERVL-MaLR	(7)	421	1	794136
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
39	0.0	0.0	0.0	chr12	12696340	12696375	(120578934)	+	(T)n	Simple_repeat	1	36	(0)	798590
1818	16.0	12.4	1.6	chr12	40502272	40502652	(92772657)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	833829
345	21.4	18.2	0.0	chr12	42299985	42300096	(90975213)	+	LTR50	LTR/ERVL	1	137	(658)	836382
24	24.1	0.0	1.7	chr12	42300127	42300186	(90975123)	+	(TG)n	Simple_repeat	1	60	(0)	836383
23	19.9	4.1	2.6	chr12	42300187	42300197	(90975112)	+	(TCTGTG)n	Simple_repeat	3	76	(0)	836384
263	31.2	0.0	2.1	chr12	49623056	49623150	(83652159)	+	L2a	LINE/L2	3333	3425	(1)	847519
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
13	23.1	0.0	0.0	chr12	56152593	56152628	(77122681)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	858986
606	5.6	0.0	0.0	chr12	56190369	56190439	(77084870)	+	tRNA-Ser-TCG	tRNA	6	76	(9)	859050
2265	10.3	0.7	0.0	chr12	56190451	56190742	(77084567)	C	AluSx	SINE/Alu	(0)	312	19	859051
2005	10.7	0.0	0.4	chr12	56464543	56464803	(76810506)	+	AluSz	SINE/Alu	41	300	(12)	859593
11	34.6	2.9	0.0	chr12	57547085	57547153	(75728156)	+	G-rich	Low_complexity	1	71	(0)	861491
2667	10.5	0.3	0.0	chr12	71693654	71694016	(61581293)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	882686
1871	13.9	5.5	5.3	chr12	74535555	74535934	(58739375)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	886323
12	15.8	0.0	3.3	chr12	93441908	93441937	(39833372)	+	(TCTCG)n	Simple_repeat	1	30	(0)	913432
14	15.9	0.0	0.0	chr12	93441980	93442007	(39833302)	+	(GCC)n	Simple_repeat	1	28	(0)	913433
37	0.0	0.0	0.0	chr12	100200510	100200541	(33074768)	+	(AC)n	Simple_repeat	1	32	(0)	925061
14	18.4	0.0	0.0	chr12	102120190	102120220	(31155089)	+	(GCG)n	Simple_repeat	1	31	(0)	928585
2091	10.8	8.0	2.3	chr12	103699329	103699671	(29575638)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	931123
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
2649	10.8	0.3	0.5	chr12	104412404	104412777	(28862532)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	932518
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
13	0.0	0.0	8.0	chr12	106773996	106774020	(26501289)	+	(GCCA)n	Simple_repeat	1	25	(0)	936817
2370	11.8	11.0	0.5	chr12	107900660	107901042	(25374267)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	939039
366	30.5	4.8	4.3	chr12	110906381	110906565	(22368744)	+	HAL1b	LINE/L1	2235	2420	(1)	945872
30	17.2	1.8	0.0	chr12	110906628	110906682	(22368627)	+	(CA)n	Simple_repeat	1	56	(0)	945873
395	27.0	2.5	1.7	chr12	111444298	111444414	(21830895)	C	L4_A_Mam	LINE/RTE-X	(183)	4807	4690	947122
273	27.2	1.2	0.0	chr12	113075514	113075594	(20199715)	C	MER103C	DNA/hAT-Charlie	(122)	175	94	950733
14	26.3	5.4	4.1	chr12	113462615	113462707	(19812602)	+	(CTCCCT)n	Simple_repeat	1	98	(0)	951669
365	12.7	3.7	8.1	chr12	115388183	115388236	(17887073)	C	LTR50	LTR/ERVL	(2)	793	742	955910
2465	13.1	10.8	0.5	chr12	115388237	115388619	(17886690)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	955911
2110	9.9	5.5	0.9	chr12	115918707	115919021	(17356288)	C	THE1D	LTR/ERVL-MaLR	(0)	381	52	957085
336	12.1	1.7	0.0	chr12	115919029	115919086	(17356223)	+	MER5A	DNA/hAT-Charlie	131	189	(0)	957086
723	27.4	6.3	0.5	chr12	120116117	120116340	(13158969)	C	MIRb	SINE/MIR	(1)	267	30	966260
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
363	28.5	15.6	1.5	chr12	121991189	121991320	(11283989)	C	L2b	LINE/L2	(0)	3375	3222	970847
605	22.6	6.6	3.1	chr12	121991432	121991591	(11283718)	+	MER5A	DNA/hAT-Charlie	1	166	(23)	970848
2279	10.9	3.2	12.6	chr12	124669291	124669711	(8605598)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	976536
1792	25.0	7.4	8.3	chr12	124774624	124774882	(8500427)	+	L1ME1	LINE/L1	5428	5718	(461)	976807
2142	15.9	1.6	2.7	chr12	124774883	124775250	(8500059)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	976808
39	21.6	3.4	5.2	chr12	128823828	128823975	(4451334)	+	(GCC)n	Simple_repeat	1	153	(0)	983925
2336	11.9	2.6	2.6	chr12	130669351	130669731	(2605578)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	987012
13	28.9	0.0	5.7	chr12	131949668	131949737	(1325572)	+	(GCCCC)n	Simple_repeat	1	70	(0)	988881
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
79	17.1	1.1	2.8	chr12	132470794	132470908	(804401)	+	G-rich	Low_complexity	62	173	(0)	989506
253	23.7	0.0	2.6	chr12	132470909	132470986	(804323)	C	PRIMA4-int	LTR/ERV1	(7691)	579	504	989507
17	28.9	0.0	0.0	chr12	132470992	132471032	(804277)	+	(AC)n	Simple_repeat	1	41	(0)	989508
22	7.2	0.0	0.0	chr12	132471069	132471097	(804212)	+	(GA)n	Simple_repeat	1	29	(0)	989509
795	24.0	6.9	0.4	chr12	132471099	132471109	(804200)	+	L1MA9	LINE/L1	5815	5825	(487)	989499
1298	11.5	0.6	0.0	chr13	20476205	20476378	(93887950)	+	AluSx	SINE/Alu	132	306	(6)	994304
23	25.9	4.6	0.0	chr13	29850315	29850403	(84513925)	+	(CGCCTC)n	Simple_repeat	1	93	(0)	1008714
1890	12.9	6.1	2.7	chr13	36888145	36888509	(77475819)	+	THE1D	LTR/ERVL-MaLR	4	381	(0)	1019227
24	9.5	0.0	0.0	chr13	40026545	40026578	(74337750)	+	(GT)n	Simple_repeat	1	34	(0)	1023451
24	23.4	3.9	1.2	chr13	42272049	42272132	(72092196)	+	(GCG)n	Simple_repeat	1	86	(0)	1027115
257	20.5	10.3	0.0	chr13	44918161	44918238	(69446090)	+	L2	LINE/L2	2235	2321	(1098)	1031205
1957	11.0	13.9	0.6	chr13	45205113	45205442	(69158886)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1031790
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
1450	8.5	0.0	0.0	chr13	52195239	52195415	(62168913)	+	AluSx	SINE/Alu	1	177	(135)	1042756
16	4.3	0.0	3.9	chr13	77329420	77329445	(37034883)	+	(CTC)n	Simple_repeat	1	26	(0)	1076038
2389	21.5	10.0	10.9	chr13	95239079	95240243	(19124085)	+	L1MC5	LINE/L1	8026	8822	(482)	1099617
2053	9.6	5.2	0.0	chr13	95240261	95240531	(19123797)	+	AluSq	SINE/Alu	1	286	(27)	1099618
2028	10.9	5.8	5.3	chr13	98787210	98787588	(15576740)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1105234
12	4.3	8.3	0.0	chr13	99204763	99204786	(15159542)	+	(TGAG)n	Simple_repeat	1	26	(0)	1105888
2312	10.6	0.3	0.0	chr13	99204897	99205199	(15159129)	C	AluSx4	SINE/Alu	(4)	306	3	1105889
1207	27.1	11.5	2.3	chr13	99542833	99543432	(14820896)	+	L2a	LINE/L2	2738	3411	(15)	1106425
182	34.0	0.0	0.0	chr13	109162417	109162469	(5201859)	+	L2a	LINE/L2	3000	3052	(323)	1119705
30	31.7	0.0	1.1	chr13	110510617	110510707	(3853621)	+	(TG)n	Simple_repeat	1	91	(0)	1121325
1950	14.8	6.7	0.3	chr13	111183992	111184342	(3179986)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1122281
18068	15.2	2.1	0.6	chr13	112590276	112592191	(1772137)	+	ERV24_Prim-int	LTR/ERV1	4815	6749	(826)	1123664
772	20.0	0.0	3.5	chr13	112711321	112711465	(1652863)	+	FLAM_A	SINE/Alu	1	140	(2)	1123858
2609	22.9	6.6	8.2	chr13	113211685	113212501	(1151827)	C	L1ME1	LINE/L1	(452)	5727	4960	1124332
2640	8.8	0.8	0.0	chr13	113815415	113815766	(548562)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1125045
73	30.4	0.5	0.0	chr13	114131707	114131913	(232415)	+	(CA)n	Simple_repeat	1	208	(0)	1125265
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
16	14.0	7.5	0.0	chr14	20343644	20343683	(86700035)	+	(GGC)n	Simple_repeat	1	43	(0)	1127888
330	22.6	4.1	2.1	chr14	20343795	20343889	(86699829)	C	MER46C	DNA/TcMar-Tigger	(241)	97	1	1127889
2723	6.9	2.3	0.0	chr14	20666633	20666979	(86376739)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1128423
644	1.4	0.0	0.0	chr14	20684016	20684089	(86359629)	+	tRNA-Pro-CCA	tRNA	1	74	(1)	1128460
21	16.1	0.0	0.0	chr14	21384077	21384117	(85659601)	+	(T)n	Simple_repeat	1	41	(0)	1129660
663	1.4	0.0	0.0	chr14	22929701	22929773	(84113945)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	1131978
294	26.4	7.8	3.6	chr14	23469077	23469186	(83574532)	C	MIR3	SINE/MIR	(49)	159	45	1132899
1972	13.4	13.1	1.6	chr14	30296852	30297229	(76746489)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1141627
288	32.3	8.8	2.4	chr14	30297230	30297291	(76746427)	C	MIRb	SINE/MIR	(98)	170	100	1141626
35	21.7	3.9	6.2	chr14	34462243	34462398	(72581320)	+	(CCGC)n	Simple_repeat	1	162	(0)	1147844
379	21.5	20.7	0.0	chr14	35400955	35401061	(71642657)	C	MIRb	SINE/MIR	(16)	252	118	1149963
10788	7.8	5.8	1.7	chr14	50361771	50363283	(56680435)	+	LTR12C	LTR/ERV1	1	1578	(1)	1169840
2233	13.3	0.8	5.0	chr14	50819281	50819660	(56224058)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1170522
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
1811	14.0	8.9	6.8	chr14	61713631	61714058	(45329660)	+	MER21A	LTR/ERVL	494	931	(0)	1186939
1931	15.6	11.9	1.8	chr14	65296890	65297273	(41746445)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1192851
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
198	34.3	2.9	4.7	chr14	68786803	68786909	(38256809)	C	L3	LINE/CR1	(87)	4012	3908	1198270
821	19.8	12.7	1.0	chr14	73270112	73270440	(33773278)	C	LTR27E	LTR/ERV1	(4)	1073	453	1205860
700	22.8	11.3	1.3	chr14	73755881	73756100	(33287618)	C	MIRb	SINE/MIR	(6)	262	16	1207003
34	0.0	0.0	0.0	chr14	73756268	73756296	(33287422)	+	(GT)n	Simple_repeat	1	29	(0)	1207004
16	45.4	0.0	0.0	chr14	75231293	75231372	(31812346)	+	(TG)n	Simple_repeat	1	80	(0)	1210017
498	25.6	9.1	5.2	chr14	76203207	76203416	(30840302)	C	MamRep488	DNA/hAT-Tip100	(0)	219	1	1211788
12	22.2	6.4	0.0	chr14	76956643	76956689	(30087029)	+	(GCCGGCC)n	Simple_repeat	1	50	(0)	1213291
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
1896	13.5	6.3	4.0	chr14	91138517	91138847	(15904871)	C	THE1D	LTR/ERVL-MaLR	(37)	344	1	1235144
255	25.7	1.4	4.1	chr14	91229908	91229980	(15813738)	+	L3	LINE/CR1	3354	3424	(675)	1235357
15	17.2	0.0	6.7	chr14	92677258	92677302	(14366416)	+	(CCCA)n	Simple_repeat	1	45	(0)	1238005
200	33.3	5.1	6.2	chr14	92677353	92677512	(14366206)	C	X7C_LINE	LINE/CR1	(0)	236	79	1238006
460	28.1	8.6	3.5	chr14	92793663	92793894	(14249824)	+	L2a	LINE/L2	3103	3321	(105)	1238256
351	27.6	12.3	2.9	chr14	102768824	102769150	(4274568)	+	L2a	LINE/L2	2842	3201	(225)	1255648
225	31.5	6.1	0.9	chr14	105070152	105070260	(1973458)	+	LTR103_Mam	LTR/ERV1?	350	464	(11)	1259201
88	38.5	0.6	1.9	chr14	105853480	105853949	(1189769)	+	(GT)n	Simple_repeat	1	473	(0)	1260088
2254	11.5	4.5	3.5	chr15	34588273	34588649	(67402540)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1283072
12	8.9	4.2	0.0	chr15	41116515	41116538	(60874651)	+	(AGG)n	Simple_repeat	1	25	(0)	1292536
132	13.9	7.9	0.6	chr15	41487829	41488133	(60503056)	+	(CA)n	Simple_repeat	1	329	(0)	1293482
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
2314	14.8	2.5	5.1	chr15	44719575	44719943	(57271246)	C	MER57B2	LTR/ERV1	(0)	403	25	1299443
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
15	18.4	2.7	0.0	chr15	48178231	48178267	(53812922)	+	(CCG)n	Simple_repeat	1	38	(0)	1304453
12	19.9	1.3	11.2	chr15	48178379	48178457	(53812732)	+	(GAGCTGG)n	Simple_repeat	1	80	(0)	1304454
12	19.7	0.0	0.0	chr15	60721036	60721064	(41270125)	+	A-rich	Low_complexity	1	29	(0)	1324225
14	12.1	0.0	3.5	chr15	63833955	63833983	(38157206)	+	(GGC)n	Simple_repeat	1	29	(0)	1329210
364	25.8	3.1	1.0	chr15	64893589	64893726	(37097463)	+	MIRc	SINE/MIR	60	209	(59)	1331449
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
1502	28.8	9.7	2.9	chr15	67076591	67077203	(34913986)	+	MER115	DNA/hAT-Tip100	5	663	(30)	1336032
39	2.7	0.0	0.0	chr15	67085869	67085906	(34905283)	+	(CA)n	Simple_repeat	1	38	(0)	1336052
30	3.0	2.9	0.0	chr15	67102248	67102281	(34888908)	+	(GT)n	Simple_repeat	1	35	(0)	1336079
1384	11.5	5.2	1.4	chr15	67120755	67120975	(34870214)	+	MER30	DNA/hAT-Charlie	1	230	(0)	1336106
306	29.2	3.7	0.8	chr15	67860281	67860411	(34130778)	+	MLT1O	LTR/ERVL-MaLR	408	542	(0)	1337252
31	11.2	2.0	0.0	chr15	70097767	70097815	(31893374)	+	(AC)n	Simple_repeat	1	50	(0)	1341464
25	21.0	0.0	1.6	chr15	73633270	73633331	(28357858)	+	G-rich	Low_complexity	1	62	(0)	1347427
196	19.1	2.1	2.1	chr15	74614990	74615037	(27376152)	+	MIRc	SINE/MIR	122	169	(99)	1349183
2173	15.9	1.3	2.9	chr15	77858975	77859355	(24131834)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1354804
938	18.2	4.1	1.6	chr15	84658610	84658828	(17332361)	C	AluJb	SINE/Alu	(0)	312	87	1366359
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
2469	11.7	0.6	0.6	chr15	95993939	95994298	(5996891)	C	THE1B	LTR/ERVL-MaLR	(4)	360	1	1385225
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
517	27.3	7.4	2.7	chr15	99502124	99502379	(2488810)	C	MLT1N2	LTR/ERVL-MaLR	(13)	549	281	1390213
358	16.1	12.9	0.0	chr15	101264953	101265033	(726156)	C	LTR33	LTR/ERVL	(421)	94	2	1392559
26	0.0	0.0	0.0	chr16	2520252	2520276	(87818069)	+	(GGGC)n	Simple_repeat	1	25	(0)	1397563
426	15.7	0.0	0.0	chr16	3152609	3152678	(87185667)	C	tRNA-Pro-CCY	tRNA	(4)	71	2	1398602
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
370	31.2	13.8	0.0	chr16	3444234	3444440	(86893905)	+	MIRc	SINE/MIR	4	237	(31)	1399184
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
16	17.4	4.3	2.0	chr16	4768720	4768766	(85569579)	+	(CGCCC)n	Simple_repeat	1	49	(0)	1401819
248	18.3	17.2	6.8	chr16	10835734	10835821	(79502524)	+	L2b	LINE/L2	3257	3355	(20)	1414348
2327	9.1	2.0	1.8	chr16	10966538	10966895	(79371450)	C	THE1C	LTR/ERVL-MaLR	(15)	442	1	1414660
235	36.8	1.7	2.5	chr16	11782467	11782586	(78555759)	+	L2c	LINE/L2	3241	3359	(28)	1416464
2212	10.8	0.6	2.5	chr16	11782599	11782913	(78555432)	C	AluSx1	SINE/Alu	(3)	309	1	1416465
2039	17.0	4.4	1.7	chr16	12439381	12439734	(77898611)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1417923
218	25.7	19.7	3.7	chr16	12547338	12547527	(77790818)	C	L2b	LINE/L2	(614)	2805	2578	1418149
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
24	29.2	0.0	5.8	chr16	14071388	14071446	(76266899)	+	G-rich	Low_complexity	1	120	(0)	1421472
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
237	27.4	11.0	0.0	chr16	17301617	17301689	(73036656)	+	MIRb	SINE/MIR	145	226	(42)	1428774
206	32.6	11.3	2.4	chr16	17301697	17301859	(73036486)	C	MIR3	SINE/MIR	(65)	203	19	1428787
759	0.0	0.0	0.0	chr16	22195710	22195792	(68142553)	C	tRNA-Leu-CTA	tRNA	(2)	83	1	1439502
370	35.0	4.3	1.3	chr16	22298460	22298618	(68039727)	C	MIR	SINE/MIR	(97)	165	2	1439787
313	30.4	11.1	1.8	chr16	22298633	22298803	(68039542)	+	MIR	SINE/MIR	1	189	(73)	1439788
319	17.4	15.8	0.0	chr16	25107357	25107425	(65230920)	C	LTR53-int	LTR/ERVL	(1853)	1476	1395	1446219
362	30.7	2.2	7.2	chr16	27403455	27403647	(62934698)	+	MIRb	SINE/MIR	5	187	(81)	1451078
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
456	24.8	2.3	3.0	chr16	31713772	31713904	(58624441)	C	MER57E3	LTR/ERV1	(4)	483	352	1460719
12	20.8	3.6	5.3	chr16	48244255	48244309	(42094036)	+	(CGGAGG)n	Simple_repeat	1	57	(0)	1468422
278	32.4	0.0	6.8	chr16	53061873	53062018	(37276327)	+	MER113	DNA/hAT-Charlie	4	139	(382)	1477141
16	11.7	5.1	2.4	chr16	53434429	53434486	(36903859)	+	(GGCG)n	Simple_repeat	1	59	(0)	1477844
305	26.5	12.2	3.5	chr16	56951586	56951757	(33386588)	+	MIRc	SINE/MIR	20	208	(60)	1484027
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
15	8.9	0.0	0.0	chr16	66934335	66934358	(23403987)	+	(GCC)n	Simple_repeat	1	24	(0)	1500709
342	32.8	7.6	5.5	chr16	67834041	67834221	(22504124)	+	MIRb	SINE/MIR	84	268	(0)	1502444
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
2116	13.7	1.9	2.7	chr16	80892422	80892788	(9445557)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1526073
1607	21.9	0.9	0.9	chr16	80892791	80893117	(9445228)	C	MER58B	DNA/hAT-Charlie	(4)	337	11	1526074
1044	23.1	32.2	0.0	chr16	81471600	81472012	(8866333)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	1527336
23	25.4	8.6	0.8	chr16	81472017	81472133	(8866212)	+	(TGCACA)n	Simple_repeat	1	127	(0)	1527337
475	36.6	1.7	0.6	chr16	81472195	81472370	(8865975)	+	MIR	SINE/MIR	82	259	(3)	1527338
1379	25.0	10.0	1.1	chr16	81809154	81809598	(8528747)	+	LTR16C	LTR/ERVL	1	489	(0)	1528094
453	29.2	2.7	2.7	chr16	81821887	81822034	(8516311)	+	MIRb	SINE/MIR	21	168	(40)	1528127
146	38.6	1.1	2.3	chr16	85382708	85383522	(4954823)	+	(CA)n	Simple_repeat	1	824	(0)	1534748
1823	16.9	11.4	5.0	chr16	86990387	86990785	(3347560)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1537607
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
58	41.4	3.2	2.5	chr16	88915922	88916519	(1421826)	+	(GTGTGC)n	Simple_repeat	1	602	(0)	1540595
1258	13.1	21.3	3.3	chr17	3693825	3694068	(79563373)	C	AluSz	SINE/Alu	(11)	301	2	1551522
2661	19.9	3.3	5.7	chr17	3694069	3694307	(79563134)	+	L1MB7	LINE/L1	5711	5958	(226)	1551520
29	3.0	5.1	7.3	chr17	3795776	3795853	(79461588)	+	(TGTGTGCATC)n	Simple_repeat	1	82	(0)	1551752
201	30.2	11.5	2.8	chr17	3796789	3796931	(79460510)	C	MIR1_Amn	SINE/MIR	(41)	189	33	1551754
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
23	23.2	4.5	2.1	chr17	4807086	4807219	(78450222)	+	(GCCCCG)n	Simple_repeat	1	137	(0)	1553827
2175	12.5	3.8	2.8	chr17	5619251	5619612	(77637829)	C	THE1C	LTR/ERVL-MaLR	(2)	373	8	1555472
222	30.1	1.2	6.7	chr17	7132515	7132603	(76124838)	C	L2	LINE/L2	(952)	2467	2384	1558291
16	14.5	2.5	2.4	chr17	7132673	7132712	(76124729)	+	(CCCTGAC)n	Simple_repeat	1	41	(0)	1558295
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
691	0.0	0.0	0.0	chr17	8139452	8139525	(75117916)	C	tRNA-Thr-ACY	tRNA	(3)	74	1	1560172
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
434	29.1	11.2	2.5	chr17	8376267	8376428	(74881013)	+	MIR	SINE/MIR	46	223	(39)	1560688
2763	22.2	4.1	3.2	chr17	8855705	8856148	(74401293)	+	L1ME1	LINE/L1	5522	5973	(206)	1561598
273	2.9	0.0	0.0	chr17	16988112	16988146	(66269295)	C	tRNA-Cys-TGY	tRNA	(40)	35	1	1575885
17	22.4	6.6	2.5	chr17	21042840	21042924	(62214517)	+	(CGG)n	Simple_repeat	1	88	(0)	1583516
20	25.6	3.7	0.9	chr17	28041410	28041481	(55215960)	+	A-rich	Low_complexity	1	74	(0)	1587976
13	16.2	2.7	2.6	chr17	28041431	28041467	(55215974)	+	GA-rich	Low_complexity	1	38	(0)	1587977
1379	19.9	10.3	2.2	chr17	28540949	28541224	(54716217)	C	AluJo	SINE/Alu	(11)	301	1	1588877
2120	14.3	0.3	0.3	chr17	35539046	35539332	(47718109)	+	AluSz	SINE/Alu	2	288	(24)	1602350
29	14.9	0.0	7.7	chr17	36545398	36545475	(46711966)	+	(GGCG)n	Simple_repeat	1	78	(0)	1604134
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
19	15.4	0.0	2.2	chr17	37833259	37833273	(45424168)	+	(TTTGTTT)n	Simple_repeat	2	16	(0)	1606635
666	18.2	7.2	1.4	chr17	37833451	37833595	(45423846)	+	MER5A1	DNA/hAT-Charlie	13	166	(0)	1606636
11	16.7	5.9	0.0	chr17	38486008	38486041	(44771400)	+	(GGCCTG)n	Simple_repeat	1	36	(0)	1607948
19	21.9	4.2	2.7	chr17	38702481	38702552	(44554889)	+	G-rich	Low_complexity	1	75	(0)	1608406
416	30.3	8.4	0.7	chr17	38702582	38702734	(44554707)	C	MIRb	SINE/MIR	(19)	249	84	1608407
55	0.0	0.0	0.0	chr17	40533544	40533590	(42723851)	+	(TG)n	Simple_repeat	1	47	(0)	1612257
39	32.6	1.4	1.4	chr17	40541240	40541384	(42716057)	+	(GTGC)n	Simple_repeat	1	147	(0)	1612274
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
368	22.2	15.2	4.1	chr17	41678823	41678916	(41578525)	+	MIR	SINE/MIR	16	125	(137)	1614029
1986	15.5	1.3	0.0	chr17	42193901	42194203	(41063238)	+	AluJo	SINE/Alu	1	307	(5)	1615119
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
371	30.8	10.1	2.4	chr17	43368998	43369416	(39888025)	C	L2	LINE/L2	(422)	2997	2543	1617637
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
14	31.4	2.1	4.2	chr17	57085116	57085208	(26172233)	+	G-rich	Low_complexity	1	95	(0)	1642628
19	26.9	1.2	4.8	chr17	58330154	58330236	(24927205)	+	(ATAT)n	Simple_repeat	1	84	(0)	1644826
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
13	19.1	0.0	0.0	chr17	59106906	59106935	(24150506)	+	G-rich	Low_complexity	1	30	(0)	1646445
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
180	34.1	3.0	9.5	chr17	63999421	63999737	(19257704)	C	L2c	LINE/L2	(126)	3261	2966	1655727
2039	14.6	3.8	5.2	chr17	66483931	66484299	(16773142)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1660338
3304	14.6	2.5	3.2	chr17	67385097	67385692	(15871749)	+	LTR12	LTR/ERV1	1	592	(234)	1661928
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
7577	9.9	1.4	1.1	chr17	68774117	68775120	(14482321)	+	LTR13	LTR/ERVK	1	1007	(0)	1664779
557	25.1	4.6	5.1	chr17	72420115	72420290	(10837151)	C	MIRc	SINE/MIR	(9)	259	85	1670361
1769	15.8	9.3	4.9	chr17	72425194	72425540	(10831901)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1670366
2173	17.6	3.2	8.7	chr17	73271105	73271148	(9986293)	+	MLT1D	LTR/ERVL-MaLR	463	504	(1)	1671957
18	14.9	0.0	7.7	chr17	74203455	74203506	(9053935)	+	GA-rich	Low_complexity	1	52	(0)	1673684
344	25.2	6.1	3.1	chr17	75296048	75296174	(7961267)	+	MIR3	SINE/MIR	76	206	(2)	1675791
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
13	11.4	0.0	6.1	chr17	75775511	75775543	(7481898)	+	(TCTTCC)n	Simple_repeat	1	33	(0)	1676747
21	6.3	0.0	2.9	chr17	76726788	76726822	(6530619)	+	(CCGCC)n	Simple_repeat	1	35	(0)	1678615
176	44.1	0.6	0.0	chr17	77245542	77246437	(6011004)	+	(GT)n	Simple_repeat	1	901	(0)	1679713
511	22.0	8.9	10.4	chr17	78176755	78176947	(5080494)	C	MER20	DNA/hAT-Charlie	(25)	194	5	1681327
19	42.6	1.1	3.7	chr17	78317345	78317457	(4939984)	+	(GTGCGT)n	Simple_repeat	1	189	(0)	1681639
21	35.3	0.0	1.4	chr17	78317458	78317531	(4939910)	+	(TG)n	Simple_repeat	1	74	(0)	1681640
16	14.9	0.0	0.0	chr17	80147172	80147202	(3110239)	+	(ACGT)n	Simple_repeat	1	31	(0)	1684529
288	25.5	3.1	0.0	chr17	80575470	80575563	(2681878)	+	MER91C	DNA/hAT-Tip100	30	126	(14)	1685248
541	24.4	1.0	14.5	chr17	80988927	80989032	(2268409)	C	MER58C	DNA/hAT-Charlie	(111)	104	1	1685745
21	0.0	11.1	0.0	chr17	81560681	81560716	(1696725)	+	(AAAC)n	Simple_repeat	1	40	(0)	1686396
953	27.0	3.6	2.3	chr17	81560718	81560992	(1696449)	C	L1M5	LINE/L1	(520)	5644	5365	1686392
664	0.0	0.0	0.0	chr17	82494721	82494792	(762649)	C	tRNA-Met-i	tRNA	(3)	72	1	1687730
27	32.9	0.0	0.0	chr17	82723497	82723573	(533868)	+	(GT)n	Simple_repeat	1	77	(0)	1688144
263	15.4	0.0	3.7	chr17	82723575	82723628	(533813)	+	MER4-int	LTR/ERV1	1111	1162	(5436)	1688145
15	43.9	0.0	0.0	chr17	82723639	82723707	(533734)	+	(GT)n	Simple_repeat	1	69	(0)	1688146
146	31.1	1.9	3.7	chr17	82958796	82959480	(297961)	+	(TG)n	Simple_repeat	1	698	(0)	1688425
93	15.4	0.9	5.7	chr18	6920265	6920489	(73452796)	+	(GGTGGT)n	Simple_repeat	1	227	(0)	1699241
2880	9.4	1.1	0.5	chr18	10890400	10890772	(69482513)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1705108
1677	6.6	2.8	0.5	chr18	21703974	21704186	(58669099)	C	AluSx1	SINE/Alu	(94)	218	1	1713145
2023	13.8	11.9	1.1	chr18	22872876	22873256	(57500029)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1715137
1197	19.7	2.7	0.0	chr18	24019662	24019879	(56353406)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1717223
233	23.0	0.0	4.7	chr18	31658592	31658655	(48714630)	+	Charlie23a	DNA/hAT-Charlie	2	62	(277)	1728011
520	18.2	4.0	5.9	chr18	48835432	48835583	(31537702)	+	Charlie4z	DNA/hAT-Charlie	15	163	(4)	1752514
20	21.3	1.6	3.1	chr18	56638607	56638669	(23734616)	+	G-rich	Low_complexity	1	64	(0)	1764412
2372	15.1	4.0	0.0	chr18	58541082	58541491	(21831794)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	1767401
2478	12.4	2.8	1.4	chr18	58653201	58653559	(21719726)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1767606
11087	21.1	5.8	4.0	chr18	58653560	58655472	(21717813)	C	L1M2	LINE/L1	(2687)	4172	2103	1767601
2043	12.2	15.2	1.1	chr18	58780025	58780390	(21592895)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	1767837
17	3.2	0.0	10.3	chr18	59899887	59899925	(20473360)	+	(GCGGG)n	Simple_repeat	1	39	(0)	1769753
23	20.3	7.6	0.0	chr18	62187169	62187247	(18186038)	+	G-rich	Low_complexity	1	85	(0)	1773094
12	28.8	0.0	0.0	chr18	62187299	62187340	(18185945)	+	(GCTGCA)n	Simple_repeat	1	42	(0)	1773095
1983	12.2	1.9	3.2	chr18	69945719	69946031	(10427254)	C	THE1B	LTR/ERVL-MaLR	(0)	364	56	1783892
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
671	1.4	0.0	0.0	chr19	1383362	1383434	(57234182)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1798705
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
36	35.0	0.8	0.0	chr19	2391493	2391619	(56225997)	+	(GT)n	Simple_repeat	1	128	(0)	1800693
130	31.5	0.3	0.3	chr19	2557013	2557389	(56060227)	+	(AC)n	Simple_repeat	1	378	(0)	1801090
183	32.9	5.4	0.0	chr19	2608654	2608723	(56008893)	C	Tigger19b	DNA/TcMar-Tigger	(344)	206	133	1801230
2007	11.7	0.0	1.8	chr19	2610642	2610760	(56006856)	C	AluJo	SINE/Alu	(175)	137	21	1801235
2403	11.6	3.0	0.8	chr19	2827794	2828149	(55789467)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1801731
317	31.4	4.1	4.8	chr19	2828150	2828249	(55789367)	C	L2b	LINE/L2	(27)	3348	3252	1801730
89	34.0	1.6	0.9	chr19	3156211	3156530	(55461086)	+	(CA)n	Simple_repeat	1	325	(0)	1802526
211	39.3	3.9	0.0	chr19	3434802	3434923	(55182693)	+	MIR3	SINE/MIR	38	164	(44)	1803276
24	25.9	9.0	1.7	chr19	4123955	4124120	(54493496)	+	(CGAGGC)n	Simple_repeat	1	181	(0)	1804793
36	41.7	0.0	0.0	chr19	4305784	4305925	(54311691)	+	(GT)n	Simple_repeat	1	142	(0)	1805325
18	23.8	1.8	1.8	chr19	4402651	4402706	(54214910)	+	(GCG)n	Simple_repeat	1	57	(0)	1805516
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
605	5.5	0.0	0.0	chr19	4724635	4724707	(53892909)	C	tRNA-Val-GTG	tRNA	(3)	73	1	1806266
12	22.1	0.0	0.0	chr19	4724859	4724890	(53892726)	+	A-rich	Low_complexity	1	32	(0)	1806267
358	35.4	11.5	1.4	chr19	6460691	6460910	(52156706)	C	MIR	SINE/MIR	(1)	261	23	1810296
447	12.5	1.2	3.6	chr19	6577303	6577385	(52040231)	+	MER92B	LTR/ERV1	556	636	(0)	1810618
18	14.7	0.0	0.0	chr19	6577481	6577510	(52040106)	+	(GT)n	Simple_repeat	1	30	(0)	1810619
76	25.8	6.9	3.0	chr19	6670921	6671329	(51946287)	+	(TGTGCA)n	Simple_repeat	1	424	(0)	1810871
241	26.6	10.5	2.1	chr19	7701145	7701240	(50916376)	+	MIRc	SINE/MIR	23	127	(141)	1813523
209	13.3	0.0	4.2	chr19	7701395	7701442	(50916174)	+	MIR	SINE/MIR	118	159	(103)	1813524
185	18.4	2.6	0.0	chr19	7701429	7701466	(50916150)	+	L2c	LINE/L2	3329	3367	(20)	1813525
16	26.7	2.8	6.4	chr19	7920491	7920596	(50697020)	+	(AGCCGG)n	Simple_repeat	1	109	(0)	1813980
12	22.0	4.8	4.5	chr19	8444846	8444908	(50172708)	+	G-rich	Low_complexity	1	66	(0)	1815352
430	25.0	6.0	2.1	chr19	9140307	9140449	(49477167)	+	LTR33B	LTR/ERVL	77	225	(278)	1816898
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
38	8.5	0.0	0.0	chr19	12722562	12722612	(45895004)	+	(A)n	Simple_repeat	1	51	(0)	1825078
429	26.8	14.7	2.5	chr19	12783565	12783767	(45833849)	+	MIRb	SINE/MIR	2	233	(35)	1825205
11	32.1	0.0	3.3	chr19	12946211	12946271	(45671345)	+	(GCCCCG)n	Simple_repeat	1	61	(0)	1825595
20	19.3	2.4	0.0	chr19	13211693	13211734	(45405882)	+	(TG)n	Simple_repeat	1	43	(0)	1826151
1674	11.7	11.2	1.6	chr19	16103405	16103661	(42513955)	+	AluSz	SINE/Alu	1	285	(27)	1833125
1187	12.4	1.3	10.4	chr19	16103662	16103855	(42513761)	+	AluJo	SINE/Alu	136	307	(5)	1833124
234	21.7	4.9	1.1	chr19	16252913	16253586	(42364030)	+	(CA)n	Simple_repeat	1	707	(0)	1833494
229	30.6	1.2	2.3	chr19	16586264	16586350	(42031266)	C	MIRc	SINE/MIR	(122)	146	61	1834239
2143	10.1	0.0	3.0	chr19	18303122	18303419	(40314197)	C	AluSx	SINE/Alu	(23)	289	1	1838582
26	6.1	0.0	0.0	chr19	18770829	18770862	(39846754)	+	(TGTGGG)n	Simple_repeat	1	34	(0)	1839535
2190	11.0	1.0	0.0	chr19	23394449	23394748	(35222868)	+	AluSx1	SINE/Alu	1	303	(9)	1846613
2688	15.7	0.8	2.2	chr19	23394749	23394969	(35222647)	+	MER57E3	LTR/ERV1	270	487	(0)	1846612
2388	11.0	3.7	1.6	chr19	33555715	33556084	(25061532)	C	THE1D	LTR/ERVL-MaLR	(3)	378	1	1856937
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
38	2.8	0.0	0.0	chr19	35346801	35346837	(23270779)	+	(CA)n	Simple_repeat	1	37	(0)	1860231
2148	10.7	0.7	2.3	chr19	35758661	35758970	(22858646)	C	AluSx1	SINE/Alu	(6)	306	2	1861079
34	24.4	3.1	1.0	chr19	36214072	36214169	(22403447)	+	(AC)n	Simple_repeat	1	101	(0)	1862144
15	13.3	0.0	5.4	chr19	36214204	36214240	(22403376)	+	(CACAGG)n	Simple_repeat	1	37	(0)	1862145
382	27.4	8.2	2.3	chr19	38033705	38033785	(20583831)	+	MER113	DNA/hAT-Charlie	437	520	(1)	1865665
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
586	31.3	13.2	0.6	chr19	38557237	38557586	(20060030)	C	L2a	LINE/L2	(1)	3425	3025	1866941
411	6.6	0.0	8.2	chr19	38557597	38557657	(20059959)	+	AluJb	SINE/Alu	81	136	(176)	1866942
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
228	24.6	10.3	0.0	chr19	40777174	40777234	(17840382)	+	MIR	SINE/MIR	77	144	(118)	1871937
273	29.1	8.5	3.8	chr19	43984557	43984713	(14632903)	+	MIR	SINE/MIR	70	234	(28)	1878008
11	25.1	2.2	2.2	chr19	44753586	44753630	(13863986)	+	(ACCGGC)n	Simple_repeat	1	46	(0)	1879532
22	26.8	5.4	2.5	chr19	44955347	44955458	(13662158)	+	(CGG)n	Simple_repeat	1	118	(0)	1880074
803	0.0	0.0	0.0	chr19	45478602	45478687	(13138929)	C	tRNA-SeC(e)-TGA	tRNA	(3)	86	1	1881421
2051	9.9	5.2	3.3	chr19	46262686	46262988	(12354628)	+	AluSz	SINE/Alu	3	311	(1)	1883226
258	14.8	3.3	20.7	chr19	46262989	46263050	(12354566)	C	LTR24B	LTR/ERV1	(448)	128	70	1883225
14	10.4	6.5	0.0	chr19	46263173	46263203	(12354413)	+	GA-rich	Low_complexity	1	33	(0)	1883227
230	29.0	1.4	1.4	chr19	46718202	46718271	(11899345)	C	MIR3	SINE/MIR	(60)	148	79	1884383
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
18	31.4	0.0	2.6	chr19	47274311	47274388	(11343228)	+	G-rich	Low_complexity	1	78	(0)	1885716
1522	17.0	9.6	1.4	chr19	47517903	47518178	(11099438)	+	AluJo	SINE/Alu	2	302	(10)	1886328
326	27.6	1.5	11.3	chr19	47518179	47518222	(11099394)	C	MER5A	DNA/hAT-Charlie	(149)	40	2	1886327
2106	10.3	1.3	0.0	chr19	48118235	48118534	(10499082)	+	THE1B	LTR/ERVL-MaLR	15	318	(46)	1887994
15	21.0	1.8	5.4	chr19	48954872	48954926	(9662690)	+	(GGC)n	Simple_repeat	1	56	(0)	1890063
200	32.1	10.9	0.0	chr19	49897442	49897547	(8720069)	+	MIR	SINE/MIR	108	226	(36)	1892153
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
19	0.0	0.0	0.0	chr19	50607990	50608010	(8009606)	+	(A)n	Simple_repeat	1	21	(0)	1893906
377	27.1	0.0	0.0	chr19	50896572	50896656	(7720960)	C	MIR	SINE/MIR	(173)	89	5	1894540
12	20.6	6.7	0.0	chr19	51366809	51366853	(7250763)	+	(TCCCTA)n	Simple_repeat	1	48	(0)	1895482
411	28.9	5.8	7.6	chr19	54231813	54232015	(4385601)	C	ERV3-16A3_I-int	LTR/ERVL	(1072)	4154	3950	1901354
2154	10.8	1.0	2.9	chr19	54448652	54448966	(4168650)	+	AluSg	SINE/Alu	1	309	(1)	1901778
216	26.7	0.9	0.2	chr19	54552304	54552868	(4064748)	+	(TG)n	Simple_repeat	1	570	(0)	1901977
36	26.2	5.3	2.2	chr19	55383774	55383943	(3233673)	+	G-rich	Low_complexity	1	179	(0)	1903624
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
2147	13.0	13.6	1.3	chr2	8145360	8145734	(234047795)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1920947
278	27.7	0.0	0.0	chr2	8302092	8302156	(233891373)	C	ERV3-16A3_I-int	LTR/ERVL	(4570)	426	362	1921165
11	16.8	10.9	1.6	chr2	8302182	8302236	(233891293)	+	(TCAGCC)n	Simple_repeat	1	61	(0)	1921174
229	23.1	7.1	0.0	chr2	8303856	8303920	(233889609)	+	L2b	LINE/L2	3271	3340	(35)	1921180
23	39.0	0.0	0.0	chr2	8425709	8425803	(233767726)	+	(AC)n	Simple_repeat	1	95	(0)	1921366
191	32.1	5.4	5.4	chr2	15561456	15561567	(226631962)	+	MIRc	SINE/MIR	45	156	(112)	1932920
2381	11.2	3.7	0.3	chr2	19891968	19892335	(222301194)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1939433
2366	13.4	2.4	0.5	chr2	24887011	24887378	(217306151)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1946876
5048	15.2	6.3	2.9	chr2	25209902	25210573	(216982956)	C	LTR13A	LTR/ERVK	(0)	966	274	1947529
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
2265	6.5	2.3	3.6	chr2	28894281	28894422	(213299107)	C	AluSp	SINE/Alu	(173)	140	1	1954452
35	0.0	0.0	0.0	chr2	36966899	36966928	(205226601)	+	(AC)n	Simple_repeat	1	30	(0)	1966853
31	0.0	0.0	0.0	chr2	37156911	37156939	(205036590)	+	(CGC)n	Simple_repeat	1	29	(0)	1967231
12	26.7	4.1	0.0	chr2	37157099	37157147	(205036382)	+	(GGCG)n	Simple_repeat	1	51	(0)	1967232
2369	11.7	1.3	2.6	chr2	37617135	37617513	(204576016)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	1968011
26	6.1	0.0	0.0	chr2	39120971	39121004	(203072525)	+	(GCC)n	Simple_repeat	1	34	(0)	1970592
19	11.2	0.0	0.0	chr2	39121123	39121151	(203072378)	+	(GA)n	Simple_repeat	1	29	(0)	1970593
2304	11.0	5.3	1.9	chr2	40485946	40486307	(201707222)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1972664
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
2169	13.7	6.3	1.6	chr2	54394411	54394773	(187798756)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1994293
1189	26.6	10.5	3.0	chr2	54394774	54395553	(187797976)	+	L1ME3Cz	LINE/L1	147	990	(7)	1994292
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
16	37.6	0.0	0.0	chr2	64180086	64180138	(178013391)	+	(AC)n	Simple_repeat	1	53	(0)	2008964
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
17	12.3	2.7	2.6	chr2	85354466	85354502	(156839027)	+	(CAG)n	Simple_repeat	1	38	(0)	2040586
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
18	11.6	0.0	4.9	chr2	85616281	85616321	(156577208)	+	G-rich	Low_complexity	1	41	(0)	2041141
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
385	30.0	24.4	1.3	chr2	96120085	96120845	(146072684)	+	L2b	LINE/L2	1208	2214	(1205)	2051594
18	22.1	2.1	0.0	chr2	96266002	96266048	(145927481)	+	(TCC)n	Simple_repeat	1	48	(0)	2051857
12	14.4	7.5	2.3	chr2	97995381	97995420	(144198109)	+	(CCCGG)n	Simple_repeat	1	43	(0)	2054371
1093	28.7	3.8	2.4	chr2	98027003	98027413	(144166116)	C	L1M7	LINE/L1	(5789)	429	13	2054436
2453	10.6	0.0	0.0	chr2	98466034	98466345	(143727184)	C	AluSz	SINE/Alu	(0)	312	1	2055053
1991	14.2	5.5	2.2	chr2	106664649	106665016	(135528513)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2066834
21	23.3	0.0	0.0	chr2	108448029	108448071	(133745458)	+	(TG)n	Simple_repeat	1	43	(0)	2069250
30	34.7	0.0	0.0	chr2	108448072	108448159	(133745370)	+	(AC)n	Simple_repeat	1	88	(0)	2069251
82	34.8	3.5	1.8	chr2	109513230	109513651	(132679878)	+	(CA)n	Simple_repeat	1	437	(0)	2070782
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
20	3.8	3.7	0.0	chr2	113175336	113175362	(129018167)	+	(CT)n	Simple_repeat	1	28	(0)	2076370
16	5.3	0.0	0.0	chr2	113175362	113175381	(129018148)	+	(TG)n	Simple_repeat	1	20	(0)	2076371
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
230	20.9	0.0	0.0	chr2	126657383	126657433	(115536096)	+	MIRc	SINE/MIR	109	157	(51)	2096195
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
24	13.8	0.0	7.7	chr2	148644625	148644689	(93548840)	+	GA-rich	Low_complexity	1	65	(0)	2126931
16	11.2	0.0	3.2	chr2	169827510	169827540	(72365989)	+	(GGC)n	Simple_repeat	1	31	(0)	2155681
16	22.6	1.8	3.6	chr2	171160827	171160881	(71032648)	+	(CGG)n	Simple_repeat	1	56	(0)	2157912
30	5.6	0.0	0.0	chr2	171160967	171161003	(71032526)	+	(GCG)n	Simple_repeat	1	37	(0)	2157913
2256	12.3	3.1	3.1	chr2	171414774	171415133	(70778396)	+	THE1B	LTR/ERVL-MaLR	1	360	(4)	2158397
571	30.7	12.5	7.1	chr2	176428412	176428983	(65764546)	+	L2a	LINE/L2	2808	3416	(10)	2166107
2228	10.0	8.4	0.6	chr2	176428985	176429335	(65764194)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2166108
2196	13.4	2.4	2.1	chr2	180937504	180937877	(61255652)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2172084
16	0.0	0.0	0.0	chr2	181236300	181236319	(60957210)	+	(GTG)n	Simple_repeat	1	20	(0)	2172466
240	32.7	7.2	1.9	chr2	181236366	181236471	(60957058)	+	MIRb	SINE/MIR	41	152	(116)	2172467
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
369	24.6	22.1	0.0	chr2	200889717	200889903	(41303626)	C	MIR	SINE/MIR	(21)	241	2	2199072
193	32.8	5.8	7.2	chr2	201125234	201125512	(41068017)	C	L2c	LINE/L2	(1443)	1976	1702	2199579
2370	7.8	0.0	3.1	chr2	202265464	202265588	(39927941)	+	AluSc	SINE/Alu	194	309	(0)	2201570
18	14.3	0.0	2.9	chr2	202634738	202634771	(39558758)	+	(AC)n	Simple_repeat	1	34	(0)	2202410
634	27.8	8.9	3.3	chr2	218885867	218886108	(23307421)	C	MIR	SINE/MIR	(5)	257	1	2226973
18	7.5	3.6	0.0	chr2	218886212	218886239	(23307290)	+	(CA)n	Simple_repeat	1	29	(0)	2226974
24	8.0	2.5	0.0	chr2	219229565	219229604	(22963925)	+	(GGCTC)n	Simple_repeat	1	41	(0)	2227555
2692	11.0	0.0	1.1	chr2	221782640	221783017	(20410512)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	2231615
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
2434	17.6	2.8	0.0	chr2	230943584	230943999	(11249530)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2245941
2545	14.9	7.5	2.3	chr2	230950632	230951402	(11242127)	+	MER21A	LTR/ERVL	1	931	(0)	2245956
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
2622	12.3	7.0	0.0	chr2	231895007	231895403	(10298126)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	2247852
20	29.5	0.0	0.0	chr2	240624953	240625007	(1568522)	+	(TG)n	Simple_repeat	1	55	(0)	2260230
1170	14.8	4.5	12.9	chr2	241729886	241730093	(463436)	C	THE1B	LTR/ERVL-MaLR	(62)	302	96	2261631
183	17.9	5.1	1.8	chr2	241730128	241730184	(463345)	C	L2	LINE/L2	(2436)	983	925	2261633
932	8.1	6.4	4.0	chr2	241864202	241866165	(327364)	+	(GT)n	Simple_repeat	1	2089	(0)	2261801
2149	16.5	6.8	2.7	chr20	1622444	1622853	(62821314)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2265312
13	23.8	2.2	2.1	chr20	3820503	3820548	(60623619)	+	(GCGC)n	Simple_repeat	1	47	(0)	2269563
1127	28.1	6.0	7.2	chr20	5673841	5674435	(58769732)	+	L1ME3G	LINE/L1	13	599	(325)	2273017
627	30.7	0.0	6.0	chr20	5674470	5674637	(58769530)	+	MIR	SINE/MIR	44	204	(58)	2273018
930	29.2	10.3	1.5	chr20	17826282	17826740	(46617427)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	76	2291560
422	28.1	11.8	4.0	chr20	23644313	23644609	(40799558)	C	L1ME4a	LINE/L1	(179)	5945	5623	2299960
1333	9.2	1.7	0.0	chr20	26009529	26009702	(38434465)	C	AluSx1	SINE/Alu	(22)	290	114	2303099
28	3.3	0.0	0.0	chr20	31880262	31880292	(32563875)	+	(TCCA)n	Simple_repeat	1	31	(0)	2307087
196	29.6	6.3	1.0	chr20	33915712	33915862	(30528305)	+	MIRc	SINE/MIR	11	181	(87)	2311898
182	29.0	9.3	2.7	chr20	34515487	34515596	(29928571)	C	MIR1_Amn	SINE/MIR	(78)	152	35	2313238
2402	9.4	0.0	0.3	chr20	37044332	37044638	(27399529)	C	AluSx1	SINE/Alu	(6)	306	1	2319080
259	28.4	4.1	2.5	chr20	37179674	37179792	(27264375)	+	MIR	SINE/MIR	24	144	(118)	2319439
649	23.9	5.5	2.8	chr20	38473494	38473704	(25970463)	C	MIRb	SINE/MIR	(8)	260	44	2322242
18	27.8	1.6	3.1	chr20	38997662	38997725	(25446442)	+	(GT)n	Simple_repeat	1	65	(0)	2323311
2456	13.2	2.4	1.1	chr20	39078684	39079059	(25365108)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2323454
934	25.1	5.5	2.6	chr20	43680861	43681126	(20763041)	C	L1ME1	LINE/L1	(87)	6092	5819	2331733
182	35.4	8.4	7.9	chr20	43681195	43681372	(20762795)	+	L2	LINE/L2	2685	2863	(556)	2331734
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
2176	13.6	5.2	0.8	chr20	44743297	44743660	(19700507)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2334241
14	24.4	2.0	2.0	chr20	45911094	45911143	(18533024)	+	(GCCCC)n	Simple_repeat	1	51	(0)	2336529
712	30.8	6.3	0.2	chr20	48738990	48739295	(15704872)	+	L2a	LINE/L2	2805	3154	(272)	2342753
191	32.3	1.6	0.0	chr20	49915961	49916022	(14528145)	C	MIRc	SINE/MIR	(119)	149	87	2345602
579	17.4	0.9	0.9	chr20	49916080	49916189	(14527978)	+	MIRc	SINE/MIR	47	156	(112)	2345603
951	25.9	3.9	4.9	chr20	51528107	51528366	(12915801)	+	L1ME4b	LINE/L1	400	659	(233)	2349319
21	47.0	0.6	0.6	chr20	51528384	51528542	(12915625)	+	(AC)n	Simple_repeat	1	160	(0)	2349321
250	21.5	9.7	5.1	chr20	51528551	51528648	(12915519)	+	L1ME4b	LINE/L1	716	818	(74)	2349319
2243	13.7	6.3	0.0	chr20	54058857	54059213	(10384954)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2354944
24	23.1	0.0	2.9	chr20	56468525	56468593	(7975574)	+	(GCCCC)n	Simple_repeat	1	69	(0)	2359091
11	36.0	1.1	3.4	chr20	57390012	57390098	(7054069)	+	G-rich	Low_complexity	1	88	(0)	2361090
13	13.7	2.9	2.9	chr20	57398425	57398458	(7045709)	+	(GCAGAG)n	Simple_repeat	1	35	(0)	2361107
488	30.3	14.7	3.4	chr20	58458445	58458969	(5985198)	C	L2a	LINE/L2	(3)	3423	2822	2362959
301	30.2	11.2	0.5	chr20	59004622	59004837	(5439330)	C	L2a	LINE/L2	(1764)	1655	1414	2363798
13	26.7	0.0	0.0	chr20	59752262	59752305	(4691862)	+	(CGTGTG)n	Simple_repeat	1	44	(0)	2364981
1882	15.4	1.6	4.8	chr20	59912676	59913051	(4531116)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2365187
13	19.6	4.0	3.9	chr20	63272867	63272916	(1171251)	+	(GCCCT)n	Simple_repeat	1	52	(0)	2369449
216	32.4	1.8	0.9	chr20	63707137	63707248	(736919)	+	L2	LINE/L2	2483	2595	(824)	2369899
16	23.0	5.6	4.0	chr20	63969865	63969935	(474232)	+	(GC)n	Simple_repeat	1	75	(0)	2370305
17	22.4	7.3	0.0	chr20	63969995	63970011	(474156)	+	G-rich	Low_complexity	1	41	(32)	2370306
26	5.2	2.5	0.0	chr20	63970012	63970051	(474116)	+	(GGGGCG)n	Simple_repeat	1	41	(0)	2370307
227	30.2	14.6	7.1	chr21	25567375	25567613	(21142370)	C	L2c	LINE/L2	(3)	3384	3125	2392655
44	0.0	0.0	0.0	chr21	25576486	25576523	(21133460)	+	(TG)n	Simple_repeat	1	38	(0)	2392664
239	28.1	6.7	7.3	chr21	25577859	25578008	(21131975)	C	MER5A	DNA/hAT-Charlie	(32)	157	9	2392667
2253	13.5	2.2	0.8	chr21	29265739	29266097	(17443886)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2398034
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
254	7.8	9.5	2.5	chr21	33985074	33985631	(12724352)	+	(AC)n	Simple_repeat	1	611	(0)	2405938
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
300	24.1	2.2	0.0	chr21	41426027	41426113	(5283870)	C	MER5A	DNA/hAT-Charlie	(79)	110	22	2417429
239	7.4	6.9	0.9	chr21	42439633	42440050	(4269933)	+	(CA)n	Simple_repeat	1	447	(0)	2418874
2097	9.8	13.3	0.6	chr21	42461243	42461601	(4248382)	+	MSTA	LTR/ERVL-MaLR	17	428	(0)	2418904
32	23.9	1.2	1.1	chr21	42974686	42974771	(3735212)	+	(CCG)n	Simple_repeat	1	87	(0)	2419664
1527	23.0	5.5	2.7	chr21	43353166	43353603	(3356380)	+	MLT1C	LTR/ERVL-MaLR	1	451	(16)	2420186
419	16.5	8.1	2.6	chr21	43958234	43959528	(2750455)	+	(GT)n	Simple_repeat	1	1400	(0)	2421097
20	21.4	4.0	0.0	chr21	44911047	44911096	(1798887)	+	(CA)n	Simple_repeat	1	52	(0)	2422307
31	27.8	5.0	1.2	chr21	44911138	44911375	(1798608)	+	(AC)n	Simple_repeat	1	247	(0)	2422308
2589	5.8	8.2	0.0	chr21	45593459	45593784	(1116199)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2422974
2435	9.7	5.5	2.4	chr21	45719436	45719804	(990179)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2423129
253	16.5	14.1	2.5	chr21	46253682	46253762	(456221)	+	MSTA	LTR/ERVL-MaLR	129	220	(208)	2423675
288	15.4	13.0	2.6	chr21	46253743	46253819	(456164)	+	MSTA	LTR/ERVL-MaLR	114	215	(213)	2423675
281	16.3	7.1	0.9	chr21	46253862	46253939	(456044)	+	THE1D	LTR/ERVL-MaLR	114	192	(183)	2423676
1367	11.4	15.4	0.8	chr21	46253918	46254182	(455801)	+	MSTA	LTR/ERVL-MaLR	118	428	(0)	2423677
263	14.8	4.7	3.2	chr21	46372384	46372446	(337537)	C	MER4-int	LTR/ERV1	(5439)	1159	1096	2423885
75	33.8	0.0	0.0	chr22	25456735	25456963	(25361505)	+	(TG)n	Simple_repeat	1	229	(0)	2442230
1616	17.7	0.0	0.0	chr22	28955674	28955927	(21862541)	+	AluJo	SINE/Alu	38	291	(21)	2449633
298	33.1	2.3	2.3	chr22	29167433	29167562	(21650906)	C	LTR84b	LTR/ERVL	(401)	360	231	2450014
355	23.7	2.1	0.0	chr22	29202846	29202938	(21615530)	+	MIRb	SINE/MIR	148	242	(26)	2450104
200	25.4	17.9	3.8	chr22	29300907	29301172	(21517296)	+	L2a	LINE/L2	1741	2052	(1367)	2450291
14	22.2	5.5	3.9	chr22	29481001	29481080	(21337388)	+	(GCGACGC)n	Simple_repeat	1	81	(0)	2450661
12	12.1	7.9	2.4	chr22	29766978	29767015	(21051453)	+	(TCCTGCG)n	Simple_repeat	1	41	(0)	2451281
453	24.8	8.7	0.7	chr22	30356405	30356542	(20461926)	C	MER5A1	DNA/hAT-Charlie	(0)	166	17	2452430
14	16.4	2.9	0.0	chr22	31212128	31212161	(19606307)	+	(GCCAGA)n	Simple_repeat	1	35	(0)	2454271
13	21.7	3.4	4.9	chr22	31212162	31212220	(19606248)	+	G-rich	Low_complexity	1	61	(0)	2454272
18	10.8	3.3	0.0	chr22	31547160	31547189	(19271279)	+	(CA)n	Simple_repeat	1	31	(0)	2455062
182	23.3	15.1	6.2	chr22	31753568	31753663	(19064805)	C	L3	LINE/CR1	(204)	3895	3790	2455538
2036	11.8	6.6	2.7	chr22	35230881	35231246	(15587222)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2462530
208	24.8	1.2	0.0	chr22	36920988	36921485	(13896983)	+	(TG)n	Simple_repeat	1	504	(0)	2466129
16	30.9	0.0	1.6	chr22	37061151	37061211	(13757257)	+	(CCT)n	Simple_repeat	1	61	(0)	2466428
1856	9.7	4.7	4.6	chr22	37220581	37220965	(13597503)	C	THE1C	LTR/ERVL-MaLR	(26)	355	1	2466739
189	30.9	1.8	0.0	chr22	37309716	37309770	(13508698)	C	MIR3	SINE/MIR	(92)	116	61	2466953
16	18.0	4.5	0.0	chr22	37608817	37608860	(13209608)	+	G-rich	Low_complexity	1	46	(0)	2467651
2280	3.7	5.5	0.0	chr22	37844596	37844867	(12973601)	C	AluSc	SINE/Alu	(21)	288	1	2468202
1096	30.9	12.3	1.9	chr22	38200999	38201741	(12616727)	C	L2a	LINE/L2	(228)	3198	2244	2469021
190	34.9	1.6	0.0	chr22	38260407	38260469	(12557999)	C	MIR1_Amn	SINE/MIR	(82)	148	85	2469126
739	26.9	3.7	0.2	chr22	38260488	38260705	(12557763)	+	MIR	SINE/MIR	6	229	(33)	2469127
245	24.1	2.0	2.0	chr22	39144733	39144810	(11673658)	+	MIR3	SINE/MIR	80	157	(105)	2470985
434	29.2	1.9	2.5	chr22	39144849	39145006	(11673462)	C	MIR	SINE/MIR	(78)	184	28	2470986
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
206	30.9	0.0	5.6	chr22	39523596	39523667	(11294801)	C	MIRb	SINE/MIR	(38)	230	163	2471817
2407	3.6	0.0	4.6	chr22	39523687	39523993	(11294475)	C	AluY	SINE/Alu	(18)	293	1	2471818
1832	13.3	12.2	3.0	chr22	45480746	45481116	(5337352)	+	MSTA	LTR/ERVL-MaLR	2	411	(17)	2484032
2500	10.8	2.4	1.3	chr22	45620677	45621053	(5197415)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2484265
212	34.1	9.6	0.6	chr22	46798601	46798780	(4019688)	C	L2b	LINE/L2	(20)	3355	3158	2486081
1663	14.7	12.8	1.1	chr22	49657330	49657700	(1160768)	C	MSTA	LTR/ERVL-MaLR	(7)	421	1	2489606
34	36.0	0.0	4.0	chr22	49970634	49970807	(847661)	+	(GT)n	Simple_repeat	1	174	(0)	2490008
17	16.7	0.0	4.5	chr22	50621010	50621053	(197415)	+	(TGCATG)n	Simple_repeat	1	44	(0)	2490974
2293	10.6	1.1	10.4	chr3	4425722	4426123	(193869436)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2498975
639	28.1	4.8	0.0	chr3	9878015	9878210	(188417349)	+	MIRb	SINE/MIR	23	228	(40)	2508143
734	21.3	1.2	2.4	chr3	9878214	9878381	(188417178)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	2508144
22	22.0	0.0	0.0	chr3	13009649	13009692	(185285867)	+	(GT)n	Simple_repeat	1	44	(0)	2514471
13	19.3	2.2	4.3	chr3	15206100	15206144	(183089415)	+	(GCCCG)n	Simple_repeat	1	46	(0)	2518367
222	25.0	11.4	4.9	chr3	41245983	41246104	(157049455)	C	MIR3	SINE/MIR	(48)	160	30	2557240
380	34.0	6.3	1.0	chr3	44554812	44555007	(153740552)	C	MIRb	SINE/MIR	(19)	249	43	2562296
229	22.8	12.9	9.0	chr3	45905543	45905653	(152389906)	+	ERV3-16A3_LTR	LTR/ERVL	36	151	(271)	2564636
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
2566	8.8	2.9	6.7	chr3	53197094	53197442	(145098117)	+	THE1C	LTR/ERVL-MaLR	1	350	(25)	2577181
12	35.7	6.4	2.2	chr3	58009956	58010126	(140285433)	+	(TGTGCA)n	Simple_repeat	1	182	(0)	2585185
28	16.5	0.0	0.0	chr3	58010090	58010143	(140285416)	+	(GTGT)n	Simple_repeat	1	54	(0)	2585186
2084	12.5	10.2	0.3	chr3	58464833	58465168	(139830391)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	2586065
2263	12.0	3.9	2.8	chr3	72266963	72267322	(126028237)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2608821
515	30.1	5.3	2.3	chr3	72848661	72848881	(125446678)	+	MIR	SINE/MIR	18	245	(17)	2610047
17	27.1	4.5	0.0	chr3	72848961	72849027	(125446532)	+	(TTTCTC)n	Simple_repeat	1	70	(0)	2610048
1756	16.1	11.4	6.7	chr3	98233444	98233849	(100061710)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2638742
985	28.6	14.8	3.1	chr3	101518087	101518533	(96777026)	C	L2a	LINE/L2	(8)	3418	2911	2643101
468	23.8	8.1	2.6	chr3	101518578	101518728	(96776831)	C	L2	LINE/L2	(410)	3009	2850	2643102
1927	10.6	8.1	4.6	chr3	107861906	107862272	(90433287)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2651452
1253	16.9	5.2	10.5	chr3	108124736	108124858	(90170701)	C	MLT1B	LTR/ERVL-MaLR	(65)	325	233	2651858
2502	9.1	3.5	0.6	chr3	108124859	108125222	(90170337)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2651859
6757	19.6	3.9	2.3	chr3	109081753	109083480	(89212079)	+	L1MA4	LINE/L1	1422	3199	(4366)	2653221
15	20.5	5.1	0.0	chr3	112676872	112676910	(85618649)	+	(AC)n	Simple_repeat	1	41	(0)	2658165
2244	12.2	5.5	0.6	chr3	118810624	118810985	(79484574)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2666734
13	18.9	2.8	0.0	chr3	119579862	119579897	(78715662)	+	(CCCCGCC)n	Simple_repeat	1	37	(0)	2667826
1948	10.3	2.0	2.3	chr3	125123513	125123811	(73171748)	C	THE1B	LTR/ERVL-MaLR	(66)	298	1	2676471
40	45.7	0.0	0.0	chr3	127574847	127575070	(70720489)	+	(TGTG)n	Simple_repeat	1	224	(0)	2680295
57	32.7	2.6	4.3	chr3	127575071	127575087	(70720472)	+	(GTATGT)n	Simple_repeat	295	350	(0)	2680294
66	35.3	2.3	1.4	chr3	127823477	127823821	(70471738)	+	(AC)n	Simple_repeat	1	353	(0)	2680734
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
16	10.9	4.7	4.4	chr3	133805548	133805590	(64489969)	+	(CATT)n	Simple_repeat	1	45	(0)	2690519
17	31.2	0.0	0.0	chr3	134795323	134795373	(63500186)	+	(CT)n	Simple_repeat	1	51	(0)	2691963
33	29.1	1.0	0.0	chr3	134795373	134795487	(63500072)	+	(CA)n	Simple_repeat	1	116	(0)	2691964
17	31.1	0.0	0.0	chr3	134795374	134795381	(63500178)	+	(CGCTCT)n	Simple_repeat	5	63	(0)	2691965
19	17.5	0.0	0.0	chr3	138175002	138175034	(60120525)	+	(T)n	Simple_repeat	1	33	(0)	2697100
320	22.5	3.6	3.6	chr3	138371059	138371141	(59924418)	C	L1MC4a	LINE/L1	(439)	5858	5776	2697412
367	23.2	17.9	2.1	chr3	138371353	138371527	(59924032)	C	MIR3	SINE/MIR	(1)	207	2	2697413
550	31.5	12.8	1.8	chr3	139344375	139344707	(58950852)	C	L2b	LINE/L2	(1)	3374	3000	2699177
1912	14.2	7.1	0.3	chr3	175274034	175274372	(23021187)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2750139
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
597	26.7	6.5	6.5	chr3	183536458	183536689	(14758870)	+	MIRb	SINE/MIR	18	249	(19)	2762859
12	14.4	0.0	0.0	chr3	183636873	183636896	(14658663)	+	(GCC)n	Simple_repeat	1	24	(0)	2763074
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
1214	33.7	10.3	4.1	chr3	191295056	191296254	(6999305)	+	L2b	LINE/L2	1785	3099	(276)	2776324
30	8.2	0.0	0.0	chr3	191296255	191296293	(6999266)	+	(AC)n	Simple_repeat	1	39	(0)	2776326
23	8.0	5.0	0.0	chr3	194583890	194583929	(3711630)	+	(CGG)n	Simple_repeat	1	42	(0)	2781440
1682	17.8	7.2	1.7	chr3	195247690	195248043	(3047516)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2782595
2044	13.9	6.1	0.0	chr4	2692092	2692443	(187522112)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2792068
6813	10.3	1.8	1.1	chr4	4334737	4335736	(185878819)	C	LTR13	LTR/ERVK	(0)	1007	1	2794531
226	27.0	0.0	4.5	chr4	6181173	6181238	(184033317)	C	L2b	LINE/L2	(10)	3365	3303	2797889
125	19.2	4.6	4.9	chr4	8239208	8239638	(181974917)	+	(ACATGC)n	Simple_repeat	1	451	(0)	2801453
229	27.9	11.4	0.0	chr4	13548967	13549060	(176665495)	+	MIR3	SINE/MIR	79	187	(81)	2809474
20	20.4	0.0	0.0	chr4	15002457	15002501	(175212054)	+	(GCG)n	Simple_repeat	1	45	(0)	2811954
501	21.8	7.2	1.6	chr4	25914492	25914691	(164299864)	+	MIRb	SINE/MIR	10	219	(49)	2829998
31	28.6	1.8	0.9	chr4	26319397	26319507	(163895048)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	2830848
2939	15.3	4.2	4.0	chr4	26746606	26747149	(163467406)	C	MER44B	DNA/TcMar-Tigger	(2)	548	4	2831540
564	21.8	4.9	4.9	chr4	38561264	38561394	(151653161)	C	MIRc	SINE/MIR	(33)	235	100	2847993
2055	14.9	6.8	9.2	chr4	38561395	38561830	(151652725)	+	MSTA	LTR/ERVL-MaLR	2	426	(2)	2847994
2141	17.0	2.7	1.4	chr4	38816328	38816690	(151397865)	C	MSTA	LTR/ERVL-MaLR	(0)	428	61	2848463
833	27.8	0.6	0.1	chr4	39812704	39814885	(150399670)	+	(TGTGTG)n	Simple_repeat	1	2195	(0)	2850541
318	26.7	3.0	12.7	chr4	39814891	39815079	(150399476)	C	MLT1N2	LTR/ERVL-MaLR	(381)	181	12	2850542
199	37.1	2.4	0.8	chr4	40192872	40192996	(150021559)	+	MIR	SINE/MIR	56	182	(80)	2851461
273	22.4	6.2	8.4	chr4	40200354	40200436	(150014119)	+	MER5B	DNA/hAT-Charlie	2	82	(96)	2851477
34	24.0	0.0	0.0	chr4	54064666	54064748	(136149807)	+	G-rich	Low_complexity	1	83	(0)	2868662
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
185	22.5	0.0	0.0	chr4	76148830	76148869	(114065686)	C	L2c	LINE/L2	(245)	3142	3103	2898786
13	20.7	2.1	4.1	chr4	102827165	102827212	(87387343)	+	(CGCGCC)n	Simple_repeat	1	49	(0)	2936199
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
9081	21.2	1.1	3.0	chr4	114806643	114808582	(75405973)	+	L1PA17	LINE/L1	343	2076	(5139)	2952519
2708	11.3	3.3	0.7	chr4	119662697	119663113	(70551442)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2958803
6665	14.0	4.4	1.9	chr4	141656967	141658037	(48556518)	C	Tigger3b	DNA/TcMar-Tigger	(13)	1218	112	2987972
1840	11.6	19.4	1.1	chr4	141658038	141658385	(48556170)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	2987973
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
397	23.9	12.1	0.9	chr4	153541667	153541776	(36672779)	C	MLT1N2	LTR/ERVL-MaLR	(24)	538	415	3004857
313	33.0	7.4	2.4	chr4	153541903	153542107	(36672448)	C	MLT1N2	LTR/ERVL-MaLR	(339)	223	8	3004857
245	25.9	3.3	7.2	chr4	166839642	166839766	(23374789)	+	LTR77	LTR/ERV1	186	305	(317)	3022838
358	12.9	11.4	6.5	chr4	166839907	166840014	(23374541)	+	MER51D	LTR/ERV1	500	613	(44)	3022839
16	29.6	1.5	3.0	chr5	611264	611328	(180926931)	+	(CA)n	Simple_repeat	1	66	(0)	3055569
1536	15.4	18.2	0.3	chr5	935618	935968	(180602291)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3055807
14	20.2	0.0	7.5	chr5	1484963	1485015	(180053244)	+	(CAGCCC)n	Simple_repeat	1	53	(0)	3056288
63	41.8	0.5	1.2	chr5	1498467	1498962	(180039297)	+	(CA)n	Simple_repeat	1	492	(0)	3056299
34	37.4	3.4	2.4	chr5	1782678	1782915	(179755344)	+	(CA)n	Simple_repeat	1	246	(0)	3056645
473	25.6	10.2	2.9	chr5	1792902	1793074	(179745185)	C	MER58A	DNA/hAT-Charlie	(3)	221	35	3056657
2162	14.2	11.4	0.5	chr5	6195244	6195624	(175342635)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3061507
34	0.0	0.0	0.0	chr5	10249898	10249934	(171288325)	+	(A)n	Simple_repeat	1	37	(0)	3066554
21	21.3	0.0	4.6	chr5	14144873	14144937	(167393322)	+	(GCGGCG)n	Simple_repeat	1	65	(0)	3071859
1916	13.1	9.9	0.3	chr5	18697747	18698075	(162840184)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3078394
2755	9.7	0.8	0.0	chr5	31975137	31975497	(149562762)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3095948
2189	11.9	7.6	0.8	chr5	34499003	34499357	(147038902)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3099872
2193	12.2	11.5	2.1	chr5	38720914	38721298	(142816961)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	3106554
14	19.9	4.2	2.0	chr5	39074435	39074482	(142463777)	+	(CCCCG)n	Simple_repeat	1	50	(0)	3107042
2163	12.8	7.3	0.6	chr5	43068752	43069106	(138469153)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3112480
20	21.8	1.9	0.0	chr5	43556761	43556813	(137981446)	+	(CCGGCC)n	Simple_repeat	1	54	(0)	3113263
18	4.1	0.0	0.0	chr5	43556848	43556872	(137981387)	+	(CTC)n	Simple_repeat	1	25	(0)	3113264
14	17.9	5.1	0.0	chr5	55307834	55307872	(126230387)	+	A-rich	Low_complexity	1	41	(0)	3123044
17	15.0	4.3	2.1	chr5	57173958	57174003	(124364256)	+	(CTCC)n	Simple_repeat	1	48	(0)	3126300
1724	16.1	15.9	0.6	chr5	57575913	57576274	(123961985)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3126958
323	27.7	0.0	2.1	chr5	66840586	66840681	(114697578)	+	MLT1H2	LTR/ERVL-MaLR	70	163	(326)	3140008
18	17.7	0.0	6.9	chr5	68214910	68214967	(113323292)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3141938
280	25.9	2.3	4.5	chr5	72380788	72380876	(109157383)	+	MIR1_Amn	SINE/MIR	82	168	(62)	3148902
271	31.3	11.8	2.2	chr5	72380930	72381112	(109157147)	+	MIR3	SINE/MIR	3	205	(3)	3148903
2352	10.9	0.0	0.0	chr5	74579511	74579795	(106958464)	+	AluSx1	SINE/Alu	1	285	(27)	3152174
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
19	17.6	4.2	5.4	chr5	91383382	91383387	(90154872)	+	(GCGCC)n	Simple_repeat	1	24	(50)	3176169
12	24.6	3.6	3.5	chr5	91383388	91383443	(90154816)	+	(GCC)n	Simple_repeat	1	58	(0)	3176170
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
25	13.9	0.0	3.8	chr5	100903436	100903488	(80634771)	+	(ACAT)n	Simple_repeat	1	53	(0)	3188317
25	23.3	0.0	4.0	chr5	122774960	122775035	(58763224)	+	G-rich	Low_complexity	1	76	(0)	3216418
2100	15.5	2.2	0.0	chr5	126355972	126356325	(55181934)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	3221063
17	13.1	0.0	0.0	chr5	132962795	132962820	(48575439)	+	(T)n	Simple_repeat	1	26	(0)	3230228
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
15	4.1	4.0	0.0	chr5	138465013	138465037	(43073222)	+	(AGGG)n	Simple_repeat	1	26	(0)	3238915
19	17.3	0.0	0.0	chr5	138654370	138654408	(42883851)	+	(GTGT)n	Simple_repeat	1	39	(0)	3239294
445	32.1	11.4	3.5	chr5	139178388	139178892	(42359367)	+	L2c	LINE/L2	2843	3387	(0)	3240227
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
2048	19.8	11.5	3.4	chr5	142017884	142018384	(39519875)	+	MLT1F	LTR/ERVL-MaLR	1	547	(1)	3245058
1888	13.7	5.8	9.6	chr5	142181840	142182187	(39356072)	+	THE1D	LTR/ERVL-MaLR	1	342	(39)	3245390
26	21.2	1.6	0.0	chr5	143009274	143009334	(38528925)	+	(CAT)n	Simple_repeat	1	62	(0)	3247043
699	27.5	8.3	1.4	chr5	143009358	143009571	(38528688)	+	MIR	SINE/MIR	12	241	(21)	3247044
2454	11.8	2.2	0.3	chr5	150092453	150092809	(31445450)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3259195
892	26.0	12.8	3.6	chr5	150401103	150401489	(31136770)	+	Charlie8	DNA/hAT-Charlie	91	518	(1910)	3259849
612	19.8	1.1	2.3	chr5	150408774	150408937	(31129322)	+	MLT1A1	LTR/ERVL-MaLR	76	273	(123)	3259862
420	30.1	2.9	2.2	chr5	150412427	150412565	(31125694)	C	MIR3	SINE/MIR	(57)	151	12	3259872
2882	22.6	4.0	3.5	chr5	151196567	151197245	(30341014)	+	L1MB5	LINE/L1	5338	6019	(155)	3261358
2678	11.3	0.0	0.0	chr5	151569171	151569534	(29968725)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3262095
189	33.9	3.2	3.2	chr5	157502318	157502442	(24035817)	C	L3b	LINE/CR1	(300)	4932	4808	3272801
2222	13.2	9.6	0.8	chr5	171926376	171926763	(9611496)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	3296292
1818	16.9	12.4	0.8	chr5	171965801	171966176	(9572083)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	3296372
2163	10.7	4.9	3.6	chr5	171977553	171977911	(9560348)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3296402
238	31.0	7.4	0.9	chr5	173055974	173056087	(8482172)	+	MIRc	SINE/MIR	108	229	(39)	3298841
228	28.6	0.0	0.0	chr5	177501296	177501365	(4036894)	+	MIR3	SINE/MIR	33	102	(106)	3307537
834	10.4	0.0	0.0	chr5	180831416	180831530	(706729)	C	AluSq2	SINE/Alu	(17)	296	182	3313312
14	25.2	0.0	5.3	chr5	181246451	181246507	(291752)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3313921
728	20.0	8.4	0.0	chr6	365985	366179	(170439800)	+	MER20	DNA/hAT-Charlie	1	213	(6)	3314732
16	0.0	0.0	7.1	chr6	391683	391710	(170414269)	+	(CGCCC)n	Simple_repeat	1	28	(0)	3314760
7870	12.1	17.7	1.8	chr6	434782	436104	(170369875)	C	LTR12C	LTR/ERV1	(0)	1579	2	3314811
1983	13.6	5.1	15.9	chr6	2663119	2663601	(168142378)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3317748
2238	15.8	7.4	0.9	chr6	6643238	6643664	(164162315)	+	L1MA9	LINE/L1	5705	6161	(151)	3323693
199	30.8	0.0	0.0	chr6	6918470	6918521	(163887458)	+	L2c	LINE/L2	3281	3332	(55)	3324205
2013	19.9	4.8	7.2	chr6	7963019	7963467	(162842512)	+	L1MA9	LINE/L1	5182	6057	(255)	3325956
2030	10.7	0.4	3.1	chr6	7963468	7963728	(162842251)	+	AluSx	SINE/Alu	1	254	(58)	3325959
37	27.9	0.0	0.0	chr6	11276332	11276419	(159529560)	+	(TG)n	Simple_repeat	1	88	(0)	3330984
226	26.3	16.7	1.0	chr6	11276440	11276535	(159529444)	+	L2a	LINE/L2	3288	3401	(25)	3330985
5756	15.2	2.3	3.1	chr6	11294045	11294278	(159511701)	C	L1MA9	LINE/L1	(529)	5783	5558	3331016
2341	13.6	10.5	0.5	chr6	11294279	11294663	(159511316)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3331018
291	21.5	1.5	0.0	chr6	21438613	21438677	(149367302)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	346	3347645
234	26.9	1.9	0.0	chr6	21438804	21438855	(149367124)	C	MLT1I	LTR/ERVL-MaLR	(301)	143	91	3347645
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
14	13.2	2.9	2.8	chr6	26156401	26156435	(144649544)	+	(CTGCCC)n	Simple_repeat	1	36	(0)	3354734
238	17.6	8.3	1.5	chr6	26157243	26157310	(144648669)	C	AluY	SINE/Alu	(15)	287	214	3354736
13	13.7	2.9	2.9	chr6	26234147	26234180	(144571799)	+	(CACCC)n	Simple_repeat	1	35	(0)	3354869
1553	16.2	1.0	5.4	chr6	26249689	26250003	(144555976)	C	AluSz	SINE/Alu	(11)	301	1	3354891
50	0.0	0.0	0.0	chr6	26365475	26365517	(144440462)	+	(TG)n	Simple_repeat	1	43	(0)	3355125
2114	14.0	0.7	0.0	chr6	27815588	27815895	(142990084)	C	AluSx	SINE/Alu	(2)	310	1	3357641
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
619	1.4	0.0	0.0	chr6	28838444	28838515	(141967464)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359318
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
1152	21.8	1.3	10.5	chr6	30493707	30494073	(140311906)	+	MST-int	LTR/ERVL-MaLR	1003	1325	(326)	3361679
421	22.7	12.3	0.0	chr6	31351845	31351972	(139454007)	+	MER5A1	DNA/hAT-Charlie	2	147	(19)	3363204
1936	26.0	7.9	1.8	chr6	31352053	31353174	(139452805)	+	L2a	LINE/L2	2224	3424	(2)	3363205
11	21.1	2.5	2.4	chr6	31558911	31558950	(139247029)	+	(ACGCAC)n	Simple_repeat	1	41	(0)	3363506
202	32.9	17.5	1.7	chr6	31578722	31578894	(139227085)	+	MIRb	SINE/MIR	55	260	(8)	3363541
14	25.2	2.1	0.0	chr6	32130213	32130259	(138675720)	+	G-rich	Low_complexity	1	48	(0)	3364426
24	31.3	0.0	4.2	chr6	33427126	33427220	(137378759)	+	(TG)n	Simple_repeat	1	95	(0)	3366428
16	8.3	0.0	0.0	chr6	35728127	35728152	(135077827)	+	(CGGG)n	Simple_repeat	1	26	(0)	3371015
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
19	25.7	4.9	1.2	chr6	35731935	35731962	(135074017)	+	(GGAGCG)n	Simple_repeat	1	83	(0)	3371022
13	31.6	0.0	0.0	chr6	35731963	35732013	(135073966)	+	G-rich	Low_complexity	1	51	(0)	3371023
46	2.3	0.0	0.0	chr6	36680308	36680351	(134125628)	+	(GT)n	Simple_repeat	1	44	(0)	3373075
2363	13.3	1.3	0.8	chr6	37749412	37749790	(133056189)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3375271
2619	9.3	5.1	0.0	chr6	38673753	38674106	(132131873)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3376767
463	27.9	4.2	1.9	chr6	43383972	43384132	(127421847)	+	LTR67B	LTR/ERVL	455	619	(1)	3385236
13	16.1	0.0	9.8	chr6	44062836	44062886	(126743093)	+	(CCCTCTG)n	Simple_repeat	1	51	(0)	3386498
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
2246	14.1	2.7	0.0	chr6	83199494	83199847	(87606132)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3436209
1405	29.5	9.2	4.9	chr6	83199848	83200381	(87605598)	C	ERVL-E-int	LTR/ERVL	(2759)	2908	2348	3436208
14	0.0	0.0	0.0	chr6	87152052	87152069	(83653910)	+	(GGC)n	Simple_repeat	1	18	(0)	3441134
13	23.9	3.1	4.5	chr6	89433119	89433182	(81372797)	+	G-rich	Low_complexity	1	66	(0)	3444762
259	24.2	12.8	0.0	chr6	89638871	89638965	(81167014)	+	MIRb	SINE/MIR	124	232	(36)	3445116
732	6.2	45.9	3.6	chr6	99394273	99394485	(71411494)	C	AluSx	SINE/Alu	(9)	303	1	3457559
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
17	7.0	0.0	5.9	chr6	142146996	142147029	(28658950)	+	(AACAA)n	Simple_repeat	1	34	(0)	3518107
378	30.9	2.5	5.6	chr6	142822880	142823164	(27982815)	C	LTR88b	LTR/Gypsy?	(17)	820	545	3519034
4664	21.2	7.4	2.2	chr6	142823209	142824461	(27981518)	+	Zaphod	DNA/hAT-Tip100	18	1340	(2691)	3519035
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
56	30.4	1.3	2.6	chr6	149317862	149318010	(21487969)	+	(GCG)n	Simple_repeat	28	230	(0)	3528247
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
1075	18.0	2.7	0.9	chr6	159929612	159929830	(10876149)	C	LTR55	LTR/ERVL?	(324)	224	2	3544842
2744	8.1	4.0	0.3	chr6	159990228	159990588	(10815391)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3544947
16	9.3	0.0	0.0	chr6	163416049	163416075	(7389904)	+	(G)n	Simple_repeat	1	27	(0)	3549423
6707	10.5	3.8	1.5	chr6	166950876	166951859	(3854120)	C	LTR13	LTR/ERVK	(0)	1007	1	3553804
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
2169	14.0	3.0	5.7	chr7	1521467	1521796	(157824177)	C	THE1B	LTR/ERVL-MaLR	(40)	324	3	3560022
17	15.9	8.2	0.0	chr7	2403446	2403494	(156942479)	+	G-rich	Low_complexity	1	53	(0)	3561339
1742	27.7	7.8	5.0	chr7	2406578	2407206	(156938767)	+	HAL1	LINE/L1	595	1243	(1264)	3561342
329	30.4	9.8	2.1	chr7	4775036	4775176	(154570797)	+	MIRb	SINE/MIR	109	261	(7)	3565525
25	34.9	3.4	3.7	chr7	5478673	5478881	(153867092)	+	(CACG)n	Simple_repeat	1	216	(0)	3567130
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
27	22.1	0.0	0.0	chr7	5525625	5525687	(153820286)	+	(ATGA)n	Simple_repeat	1	63	(0)	3567251
1011	15.2	3.0	1.2	chr7	5526205	5526368	(153819605)	+	AluJo	SINE/Alu	132	298	(14)	3567254
1868	13.7	6.3	1.9	chr7	12323413	12323776	(147022197)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3577247
16	27.4	2.1	0.0	chr7	27662892	27662939	(131683034)	+	(GC)n	Simple_repeat	1	49	(0)	3598812
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
4516	11.1	3.2	1.8	chr7	37353224	37353900	(121992073)	C	LTR12_	LTR/ERV1	(0)	688	2	3613616
13	27.2	3.4	5.5	chr7	39949956	39950043	(119395930)	+	(CCCAG)n	Simple_repeat	1	91	(0)	3617485
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
2713	12.9	1.4	1.2	chr7	44194068	44194492	(115151481)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3623942
26	24.6	9.0	2.2	chr7	44258189	44258377	(115087596)	+	(CACATG)n	Simple_repeat	1	201	(0)	3623996
378	31.7	12.2	4.5	chr7	47937029	47937858	(111408115)	C	L2a	LINE/L2	(0)	3426	2447	3629269
258	18.1	18.2	0.0	chr7	55308979	55309050	(104036923)	C	MIR	SINE/MIR	(21)	241	154	3638437
17	12.5	0.0	0.0	chr7	55533435	55533460	(103812513)	+	(A)n	Simple_repeat	1	26	(0)	3638773
43	31.3	2.8	5.0	chr7	66920826	66921080	(92424893)	+	(CA)n	Simple_repeat	1	262	(0)	3651108
2369	7.2	1.4	0.0	chr7	69824132	69824421	(89521552)	+	AluY	SINE/Alu	1	294	(17)	3657432
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
1908	14.2	11.2	6.2	chr7	82615440	82615844	(76730129)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3681173
2463	11.1	1.1	1.6	chr7	94022614	94022990	(65322983)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3696041
3134	25.1	7.5	3.5	chr7	98201910	98203457	(61142516)	C	L1MEf	LINE/L1	(4955)	1685	15	3702095
1723	16.0	1.3	2.2	chr7	105809256	105809569	(53536404)	C	L1MB1	LINE/L1	(6)	6162	5852	3716618
553	15.7	4.2	0.0	chr7	106598920	106599041	(52746932)	C	MLT1J	LTR/ERVL-MaLR	(407)	155	20	3717814
46	4.3	0.0	0.0	chr7	114086235	114086282	(45259691)	+	(CA)n	Simple_repeat	1	48	(0)	3727931
12	10.2	2.7	7.9	chr7	114086390	114086426	(45259547)	+	(CCCG)n	Simple_repeat	1	38	(0)	3727932
2041	15.1	3.3	2.8	chr7	121062673	121063032	(38282941)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3737181
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
235	15.2	7.6	3.2	chr7	130151687	130152140	(29193833)	+	(CA)n	Simple_repeat	1	799	(449)	3750676
495	32.2	5.6	1.5	chr7	131124218	131124422	(28221551)	+	L3	LINE/CR1	1393	1606	(2493)	3752170
31	5.9	0.0	0.0	chr7	134293129	134293164	(25052809)	+	(CA)n	Simple_repeat	1	36	(0)	3757230
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
24	22.0	0.0	1.8	chr7	139708882	139708936	(19637037)	+	(TG)n	Simple_repeat	1	55	(0)	3766072
2109	14.3	3.9	2.5	chr7	141280293	141280651	(18065322)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3769042
1883	14.5	3.7	4.7	chr7	148979851	148980140	(10365833)	C	THE1D	LTR/ERVL-MaLR	(43)	338	44	3779755
2185	10.7	3.0	0.0	chr7	148980141	148980431	(10365542)	+	AluSq2	SINE/Alu	2	301	(12)	3779758
1653	23.5	6.9	2.8	chr7	151473027	151473526	(7872447)	+	MLT1F2	LTR/ERVL-MaLR	1	522	(38)	3783500
19	4.3	0.0	0.0	chr7	157016593	157016616	(2329357)	+	(GA)n	Simple_repeat	1	24	(0)	3791712
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
280	33.7	6.7	4.3	chr8	11457733	11458008	(133680628)	+	L2c	LINE/L2	3095	3377	(10)	3809617
16	13.1	0.0	0.0	chr8	17027213	17027237	(128111399)	+	(C)n	Simple_repeat	1	25	(0)	3817596
20	11.6	0.0	0.0	chr8	23198606	23198640	(121939996)	+	(A)n	Simple_repeat	1	35	(0)	3827530
25	27.4	4.4	4.2	chr8	26629939	26630075	(118508561)	+	(GCACAC)n	Simple_repeat	1	143	(0)	3833075
19	26.4	0.0	5.3	chr8	26630099	26630174	(118508462)	+	(CACATA)n	Simple_repeat	1	76	(0)	3833076
322	2.9	0.0	0.0	chr8	27774167	27774228	(117364408)	C	AluSc	SINE/Alu	(0)	309	247	3834964
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
12	17.6	0.0	0.0	chr8	28890070	28890096	(116248540)	+	(CCTTT)n	Simple_repeat	1	27	(0)	3837024
185	22.1	6.1	6.1	chr8	29469469	29469550	(115669086)	+	MIR3	SINE/MIR	120	201	(7)	3837968
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
734	26.9	2.2	8.8	chr8	37892133	37892417	(107246219)	+	L2a	LINE/L2	2563	2834	(585)	3851155
355	28.8	3.7	0.6	chr8	38768661	38770089	(106368547)	+	(GT)n	Simple_repeat	1	1473	(0)	3852935
1460	13.8	1.2	5.2	chr8	42391246	42391514	(102747122)	+	AluJo	SINE/Alu	1	258	(54)	3858711
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
1583	14.6	3.9	1.4	chr8	43093803	43094077	(102044559)	+	AluJb	SINE/Alu	1	282	(30)	3860104
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
20	21.5	0.0	0.0	chr8	61126166	61126205	(84012431)	+	(AC)n	Simple_repeat	1	40	(0)	3880221
13	29.6	1.5	3.0	chr8	63038959	63039023	(82099613)	+	(GCCCGC)n	Simple_repeat	1	66	(0)	3882621
339	26.7	12.8	1.7	chr8	66010187	66010304	(79128332)	+	MLT1B-int	LTR/ERVL-MaLR	1035	1167	(242)	3886730
1075	22.4	10.4	0.7	chr8	80134643	80134938	(65003698)	+	MLT1F	LTR/ERVL-MaLR	220	547	(1)	3907083
2307	11.8	4.2	1.9	chr8	95091143	95091514	(50047122)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3928169
250	33.6	4.6	4.6	chr8	99893781	99893911	(45244725)	+	MIR	SINE/MIR	42	172	(90)	3935817
13	15.6	2.5	4.9	chr8	100502982	100503021	(44635615)	+	G-rich	Low_complexity	1	41	(0)	3936910
2022	12.9	4.2	2.7	chr8	104864630	104865003	(40273633)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	3944374
2251	12.4	4.5	1.1	chr8	120912868	120913235	(24225401)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3967376
204	30.3	7.5	3.9	chr8	122787749	122787851	(22350785)	+	MamRTE1	LINE/RTE-BovB	3285	3391	(421)	3970528
622	24.4	5.2	13.7	chr8	122788155	122788285	(22350351)	C	MIRb	SINE/MIR	(21)	247	137	3970529
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
1683	13.0	13.1	4.1	chr8	123251044	123251381	(21887255)	+	MSTA	LTR/ERVL-MaLR	56	428	(0)	3971483
2491	8.7	0.0	0.7	chr8	123275536	123275835	(21862801)	C	AluSx1	SINE/Alu	(14)	298	1	3971520
1302	13.0	17.1	2.2	chr8	124757225	124757491	(20381145)	C	Tigger4	DNA/TcMar-Tigger	(2416)	315	1	3974272
13	15.4	5.6	0.0	chr8	129552612	129552647	(15585989)	+	(CCAGAAT)n	Simple_repeat	1	38	(0)	3983352
776	26.9	5.6	9.7	chr8	134631547	134631917	(10506719)	+	L1MD1	LINE/L1	5883	6237	(5)	3992597
550	20.1	18.6	1.4	chr8	141036011	141036156	(4102480)	C	Arthur1A	DNA/hAT-Tip100	(0)	177	1	4003044
492	40.4	0.8	0.6	chr8	143122740	143125236	(2013400)	+	(CA)n	Simple_repeat	1	2518	(0)	4005777
69	43.4	2.9	0.0	chr8	143554353	143554805	(1583831)	+	(AC)n	Simple_repeat	1	466	(0)	4006328
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
411	15.9	5.8	2.3	chr8	144853539	144853640	(284996)	C	LTR54	LTR/ERV1	(391)	107	1	4008204
22	35.2	0.0	1.2	chr9	894240	894336	(137500381)	+	(CA)n	Simple_repeat	1	95	(0)	4009960
1667	16.8	11.2	1.6	chr9	3528471	3528856	(134865861)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4013740
333	32.3	19.8	0.0	chr9	5438709	5438894	(132955823)	+	MIRb	SINE/MIR	27	258	(10)	4016459
700	27.0	8.5	14.0	chr9	5438898	5439297	(132955420)	C	LTR33	LTR/ERVL	(139)	376	1	4016460
319	25.5	3.0	3.9	chr9	7298379	7298480	(131096237)	+	L3	LINE/CR1	3893	3993	(106)	4019524
2531	10.4	0.3	0.3	chr9	16469225	16469579	(121925138)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4031972
253	31.9	14.4	4.5	chr9	22104848	22105070	(116289647)	C	MIR	SINE/MIR	(0)	262	14	4040133
692	24.3	0.7	0.0	chr9	22105284	22105435	(116289282)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	427	4040134
12	30.0	1.4	4.2	chr9	33150958	33151027	(105243690)	+	(GATG)n	Simple_repeat	1	71	(0)	4054836
13	14.7	7.9	0.0	chr9	37904198	37904235	(100490482)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	4063617
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
11	13.8	2.8	5.4	chr9	70258925	70258960	(68135757)	+	(GCGCGA)n	Simple_repeat	1	37	(0)	4082831
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
408	15.9	3.2	3.4	chr9	86052943	86053907	(52340810)	+	(CACAC)n	Simple_repeat	1	996	(0)	4107217
21	24.9	2.0	0.0	chr9	89406173	89406223	(48988494)	+	(CA)n	Simple_repeat	1	52	(0)	4112467
42	0.0	0.0	0.0	chr9	90924127	90924162	(47470555)	+	(GT)n	Simple_repeat	1	36	(0)	4114454
2461	12.9	4.2	5.8	chr9	99252989	99253383	(39141334)	C	MSTA	LTR/ERVL-MaLR	(27)	401	1	4128089
1842	14.6	12.9	1.1	chr9	108842939	108843312	(29551405)	C	MSTA	LTR/ERVL-MaLR	(3)	425	1	4143388
12	25.6	0.0	0.0	chr9	109906797	109906830	(28487887)	+	A-rich	Low_complexity	1	34	(0)	4145318
305	36.5	7.1	5.7	chr9	109906905	109907347	(28487370)	+	L2c	LINE/L2	2939	3385	(2)	4145319
285	31.9	5.5	0.7	chr9	109972467	109972655	(28422062)	+	MIR1_Amn	SINE/MIR	3	193	(75)	4145434
16	42.8	0.0	0.0	chr9	110048269	110048348	(28346369)	+	(CA)n	Simple_repeat	1	80	(0)	4145580
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
193	25.4	1.5	5.6	chr9	122912997	122913067	(15481650)	+	L2b	LINE/L2	3303	3370	(5)	4169766
509	32.3	1.9	0.0	chr9	123339059	123339216	(15055501)	+	MIR	SINE/MIR	59	219	(43)	4170544
291	32.5	6.2	0.8	chr9	123340147	123340267	(15054450)	C	MIRb	SINE/MIR	(47)	221	94	4170547
719	26.1	10.6	8.2	chr9	125632245	125632426	(12762291)	+	L2c	LINE/L2	3203	3387	(0)	4175010
388	38.1	11.4	2.6	chr9	125632419	125632768	(12761949)	C	L3b	LINE/CR1	(599)	4633	4249	4175012
19	14.9	0.0	0.0	chr9	127424461	127424497	(10970220)	+	(GTTGCCA)n	Simple_repeat	1	37	(0)	4178181
183	29.5	8.7	5.9	chr9	128788328	128788428	(9606289)	+	OldhAT1	DNA/hAT-Ac	2187	2290	(558)	4181332
2199	13.5	9.8	1.0	chr9	132082158	132082547	(6312170)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4188178
532	26.5	8.3	1.8	chr9	133822870	133823038	(4571679)	+	MIRb	SINE/MIR	57	237	(31)	4191121
29	0.0	0.0	0.0	chr9	135967784	135967808	(2426909)	+	(GT)n	Simple_repeat	1	25	(0)	4193861
76	36.3	0.9	2.1	chr9	135967825	135968156	(2426561)	+	(TG)n	Simple_repeat	1	335	(0)	4193862
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
13	0.0	0.0	0.0	chr9	137241341	137241357	(1153360)	+	(CCG)n	Simple_repeat	1	17	(0)	4195377
2301	10.2	0.0	3.1	chrX	1521909	1522254	(154518641)	C	AluSq2	SINE/Alu	(0)	313	1	4361136
1728	9.8	16.4	2.2	chrX	7111002	7111287	(148929608)	+	THE1D	LTR/ERVL-MaLR	39	379	(2)	4371219
14	22.4	1.8	5.2	chrX	46574088	46574144	(109466751)	+	(GGAGGC)n	Simple_repeat	1	58	(0)	4432406
501	32.3	3.0	3.4	chrX	47658370	47658606	(108382289)	C	MIR	SINE/MIR	(11)	251	16	4434608
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
1801	26.2	8.7	7.2	chrX	53071275	53071735	(102969160)	C	MER20B	DNA/hAT-Charlie	(265)	518	6	4442993
18	4.7	0.0	0.0	chrX	54530146	54530167	(101510728)	+	(C)n	Simple_repeat	1	22	(0)	4446015
250	23.7	0.0	3.3	chrX	63755898	63755958	(92284937)	C	Tigger19a	DNA/TcMar-Tigger	(222)	101	43	4450527
340	30.3	2.1	6.0	chrX	63756018	63756168	(92284727)	+	MIR3	SINE/MIR	12	156	(52)	4450528
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1021	27.4	3.0	8.2	chrX	97563575	97563999	(58476896)	+	CR1_Mam	LINE/CR1	1518	1919	(285)	4490912
43	14.5	0.0	0.0	chrX	120309670	120309745	(35731150)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	4522742
16	12.1	3.6	0.0	chrX	120309745	120309772	(35731123)	+	(TG)n	Simple_repeat	1	29	(0)	4522743
13	18.2	0.0	0.0	chrX	120561247	120561277	(35479618)	+	(CGCTCC)n	Simple_repeat	1	31	(0)	4523168
11	30.8	1.5	4.4	chrX	120561438	120561504	(35479391)	+	G-rich	Low_complexity	1	68	(0)	4523169
13	8.6	10.5	0.0	chrX	131705211	131705227	(24335668)	+	(CTTTTG)n	Simple_repeat	1	20	(0)	4538368
2445	10.7	0.3	0.0	chrX	131705228	131705536	(24335359)	C	AluSx	SINE/Alu	(2)	310	1	4538369
12	24.2	2.6	0.0	chrX	150983317	150983355	(5057540)	+	(GCTGC)n	Simple_repeat	1	40	(0)	4566879
14	20.9	0.0	5.5	chrX	153724559	153724631	(2316264)	+	G-rich	Low_complexity	1	68	(0)	4570654