837	9.9	3.2	0.8	chr1	1002192	1002312	(247954110)	C	AluJr4	SINE/Alu	(178)	134	11	1258
14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
15	20.2	2.1	2.1	chr1	1471604	1471650	(247484772)	+	(CCCCGCC)n	Simple_repeat	1	48	(0)	1800
15	9.1	0.0	0.0	chr1	1471854	1471877	(247484545)	+	(CGG)n	Simple_repeat	1	24	(0)	1801
12	24.4	2.2	2.2	chr1	1574178	1574222	(247382200)	+	(GCC)n	Simple_repeat	1	46	(0)	1974
11	24.6	0.0	2.5	chr1	1599236	1599275	(247357147)	+	G-rich	Low_complexity	1	40	(0)	2033
15	23.1	1.9	3.6	chr1	1599531	1599584	(247356838)	+	(GGC)n	Simple_repeat	1	55	(0)	2034
15	27.4	5.0	3.6	chr1	1599643	1599722	(247356700)	+	(GC)n	Simple_repeat	1	84	(0)	2035
29	3.2	0.0	0.0	chr1	1658919	1658950	(247297472)	+	(CGC)n	Simple_repeat	1	32	(0)	2112
2324	25.3	6.9	1.6	chr1	2115428	2116169	(246840253)	C	MER21C	LTR/ERVL	(30)	908	125	2892
21	24.3	0.0	4.1	chr1	2279575	2279647	(246676775)	+	G-rich	Low_complexity	1	73	(0)	3086
12	18.5	3.6	6.9	chr1	2412373	2412428	(246543994)	+	(GCCGCGC)n	Simple_repeat	1	58	(0)	3202
35	25.6	1.6	7.4	chr1	2412623	2412808	(246543614)	+	G-rich	Low_complexity	1	189	(0)	3203
283	23.2	4.1	0.0	chr1	5832083	5832177	(243124245)	+	MER21C	LTR/ERVL	2	99	(769)	7341
1439	19.9	5.4	2.4	chr1	5847666	5847803	(243108619)	+	MLT1A0	LTR/ERVL-MaLR	15	156	(209)	7364
12	14.9	8.1	0.0	chr1	6241774	6241810	(242714612)	+	G-rich	Low_complexity	1	40	(0)	7896
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
310	34.6	0.6	5.3	chr1	6246494	6246664	(242709758)	C	MamTip1	DNA/hAT-Tip100	(39)	228	66	7901
266	34.0	5.4	0.0	chr1	6339212	6339317	(242617105)	+	MIR	SINE/MIR	81	192	(70)	8021
19	28.8	1.5	0.0	chr1	6418908	6418974	(242537448)	+	G-rich	Low_complexity	1	68	(0)	8198
253	5.1	0.0	0.0	chr1	8317840	8317878	(240638544)	+	ORSL	DNA/hAT-Tip100	67	105	(170)	11460
611	18.8	5.2	5.2	chr1	10900921	10901094	(238055328)	C	MER121	DNA/hAT?	(165)	236	63	16577
15	17.9	4.3	2.1	chr1	11500051	11500096	(237456326)	+	(CTGCC)n	Simple_repeat	1	48	(0)	17838
13	23.0	5.0	3.2	chr1	16960884	16960943	(231995479)	+	(CTGGAG)n	Simple_repeat	1	63	(0)	28363
13	22.6	5.0	3.2	chr1	16961028	16961087	(231995335)	+	(GGCCTC)n	Simple_repeat	1	63	(0)	28364
621	32.2	9.4	6.1	chr1	18255653	18256379	(230700043)	+	L2c	LINE/L2	2525	3285	(102)	31254
272	20.6	1.4	5.6	chr1	18298314	18298385	(230658037)	C	MER39	LTR/ERV1	(634)	73	5	31343
221	30.0	11.1	4.8	chr1	18298826	18298951	(230657471)	+	L2a	LINE/L2	3287	3421	(5)	31344
14	17.8	10.5	0.0	chr1	18955934	18955990	(230000432)	+	(GGCGCCG)n	Simple_repeat	1	63	(0)	32771
236	25.9	16.8	6.1	chr1	19353577	19353724	(229602698)	+	L2	LINE/L2	2684	2850	(569)	33490
316	20.4	18.8	2.5	chr1	19881921	19882082	(229074340)	+	MIRb	SINE/MIR	3	183	(25)	34716
488	33.2	2.4	9.5	chr1	19988145	19988460	(228967962)	C	L2c	LINE/L2	(5)	3382	3090	34905
416	21.4	3.5	2.3	chr1	19988472	19988557	(228967865)	+	LTR67B	LTR/ERVL	14	100	(520)	34906
4272	16.1	3.1	2.5	chr1	19988577	19989410	(228967012)	C	L1MC1	LINE/L1	(1)	6332	5494	34907
22	29.9	2.7	0.0	chr1	20367083	20367156	(228589266)	+	GA-rich	Low_complexity	1	76	(0)	35612
1003	30.9	10.8	0.7	chr1	20367209	20367824	(228588598)	+	L2a	LINE/L2	2085	2770	(649)	35613
24	21.6	1.2	4.8	chr1	20717769	20717850	(228238572)	+	G-rich	Low_complexity	1	83	(0)	36420
11	20.7	0.0	2.9	chr1	21289985	21290019	(227666403)	+	(GGCAGC)n	Simple_repeat	1	35	(0)	37581
16	17.5	6.7	0.0	chr1	21290222	21290266	(227666156)	+	(GCC)n	Simple_repeat	1	48	(0)	37582
28	3.3	0.0	0.0	chr1	21440113	21440143	(227516279)	+	(GCAGGC)n	Simple_repeat	1	31	(0)	37924
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
328	33.0	2.4	8.5	chr1	22792708	22793025	(226163397)	C	L2c	LINE/L2	(16)	3371	3074	40947
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
19	24.5	0.0	1.8	chr1	23019614	23019668	(225936754)	+	(GGC)n	Simple_repeat	1	55	(0)	41476
2263	10.2	0.0	2.3	chr1	23539412	23539714	(225416708)	+	AluSz	SINE/Alu	1	296	(16)	42681
185	18.9	0.0	0.0	chr1	23539751	23539787	(225416635)	C	MIRc	SINE/MIR	(127)	141	105	42682
198	18.6	11.5	0.0	chr1	23539786	23539852	(225416570)	+	MIR3	SINE/MIR	69	158	(72)	42683
13	9.3	0.0	0.0	chr1	23554620	23554642	(225401780)	+	(GAAG)n	Simple_repeat	1	23	(0)	42729
16	7.1	3.1	3.0	chr1	23554882	23554913	(225401509)	+	(GAGCCA)n	Simple_repeat	1	33	(0)	42730
14	17.1	1.9	7.4	chr1	23598756	23598808	(225357614)	+	G-rich	Low_complexity	1	54	(0)	42840
606	21.6	11.3	1.9	chr1	23599013	23599220	(225357202)	+	MIRb	SINE/MIR	27	256	(12)	42841
24	17.9	1.4	5.6	chr1	24745451	24745520	(224210902)	+	(CAG)n	Simple_repeat	1	71	(0)	45644
19	22.9	3.6	0.0	chr1	26161955	26162010	(222794412)	+	(GGC)n	Simple_repeat	1	58	(0)	48719
2228	9.3	0.7	0.0	chr1	26408260	26408548	(222547874)	+	AluSz	SINE/Alu	1	291	(21)	49285
19	8.2	0.0	0.0	chr1	26993578	26993603	(221962819)	+	(G)n	Simple_repeat	1	26	(0)	50663
18	19.9	0.0	0.0	chr1	26993890	26993930	(221962492)	+	(CCCCGA)n	Simple_repeat	1	41	(0)	50664
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
14	18.4	2.7	0.0	chr1	27392530	27392566	(221563856)	+	(GCCGC)n	Simple_repeat	1	38	(0)	51639
2389	8.2	0.0	0.0	chr1	28328414	28328707	(220627715)	C	AluSz	SINE/Alu	(18)	294	1	53910
17	7.3	3.0	5.9	chr1	28812783	28812815	(220143607)	+	(TG)n	Simple_repeat	1	34	(0)	55209
372	29.4	0.7	0.3	chr1	29825189	29826254	(219130168)	+	(CA)n	Simple_repeat	1	1073	(0)	57350
365	22.9	7.8	3.8	chr1	30685436	30685599	(218270823)	+	MLT1O	LTR/ERVL-MaLR	38	205	(467)	58850
18	24.4	2.1	0.0	chr1	31239383	31239430	(217716992)	+	(CA)n	Simple_repeat	1	49	(0)	60220
21	22.4	3.6	3.5	chr1	31239640	31239729	(217716693)	+	(GCGCCGG)n	Simple_repeat	1	90	(0)	60221
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
43	4.5	0.0	0.0	chr1	35661187	35661232	(213295190)	+	(TG)n	Simple_repeat	1	46	(0)	69172
2056	11.8	1.0	2.0	chr1	35661234	35661537	(213294885)	C	AluJr	SINE/Alu	(9)	303	3	69173
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
13	20.8	2.1	4.1	chr1	36321239	36321286	(212635136)	+	(GGCCTG)n	Simple_repeat	1	49	(0)	70645
14	18.2	5.7	3.6	chr1	36582120	36582173	(212374249)	+	(CTCT)n	Simple_repeat	1	55	(0)	71179
264	32.4	0.0	5.4	chr1	36582206	36582316	(212374106)	+	MIR3	SINE/MIR	41	145	(63)	71180
35	7.0	0.0	0.0	chr1	37255872	37255917	(211700505)	+	(TGT)n	Simple_repeat	1	46	(0)	72360
381	25.9	0.0	0.0	chr1	37451898	37451978	(211504444)	+	MER94	DNA/hAT-Blackjack	54	134	(0)	72759
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
18	11.2	0.0	0.0	chr1	38270715	38270744	(210685678)	+	(GCA)n	Simple_repeat	1	30	(0)	74401
15	7.8	0.0	3.5	chr1	38285974	38286002	(210670420)	+	(AGGGG)n	Simple_repeat	1	29	(0)	74435
1846	14.9	0.4	2.1	chr1	39025943	39026230	(209930192)	C	AluJb	SINE/Alu	(29)	283	1	75886
15	22.5	0.0	0.0	chr1	39922711	39922747	(209033675)	+	(TTCA)n	Simple_repeat	1	37	(0)	77708
12	21.8	2.7	0.0	chr1	40818399	40818435	(208137987)	+	(CCCTCC)n	Simple_repeat	1	38	(0)	79568
35	0.0	0.0	0.0	chr1	41395515	41395544	(207560878)	+	(GT)n	Simple_repeat	1	30	(0)	80729
12	18.0	2.0	7.7	chr1	42456513	42456563	(206499859)	+	(GGCGC)n	Simple_repeat	1	52	(0)	82545
181	28.1	5.0	3.4	chr1	43008419	43008477	(205947945)	C	MIR	SINE/MIR	(44)	218	159	83568
33	35.7	0.5	4.3	chr1	43270234	43270468	(205685954)	+	(GAGTTG)n	Simple_repeat	1	226	(0)	84062
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
446	33.0	3.4	1.7	chr1	44592627	44592847	(204363575)	C	MIRb	SINE/MIR	(36)	232	3	86334
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
24	15.2	0.0	3.6	chr1	44775763	44775817	(204180605)	+	G-rich	Low_complexity	1	55	(0)	86689
12	19.3	0.0	5.1	chr1	44784486	44784524	(204171898)	+	(GCGG)n	Simple_repeat	1	39	(0)	86706
12	17.6	8.9	0.0	chr1	46341238	46341282	(202615140)	+	(CCCTTT)n	Simple_repeat	1	49	(0)	89845
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
12	27.4	4.1	0.0	chr1	48472079	48472127	(200484295)	+	(GGC)n	Simple_repeat	1	51	(0)	93355
412	30.3	16.1	0.8	chr1	50279808	50280070	(198676352)	+	L2b	LINE/L2	3055	3365	(10)	96466
539	29.4	9.3	1.4	chr1	50280281	50280487	(198675935)	+	MIRc	SINE/MIR	17	241	(27)	96467
464	33.1	2.9	0.6	chr1	50309450	50309619	(198646803)	C	MIR3	SINE/MIR	(12)	196	23	96543
276	22.1	2.3	0.0	chr1	50333392	50333477	(198622945)	C	MIRc	SINE/MIR	(136)	132	45	96596
17	4.3	0.0	0.0	chr1	52056281	52056304	(196900118)	+	(CCG)n	Simple_repeat	1	24	(0)	100081
859	28.7	10.0	4.4	chr1	52697872	52697999	(196258423)	+	L2a	LINE/L2	3247	3371	(55)	101487
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
272	29.2	1.4	0.0	chr1	52703541	52703612	(196252810)	C	MIR3	SINE/MIR	(68)	140	68	101511
1018	13.4	0.0	0.0	chr1	52703632	52703773	(196252649)	+	AluSc8	SINE/Alu	148	289	(22)	101512
432	22.6	8.2	2.4	chr1	52921869	52921995	(196034427)	+	MIRb	SINE/MIR	88	222	(46)	102087
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
180	26.7	1.6	3.2	chr1	53238890	53238951	(195717471)	+	MIR1_Amn	SINE/MIR	109	169	(61)	102710
580	24.9	14.8	2.8	chr1	54715147	54715633	(194240789)	+	L2b	LINE/L2	2808	3373	(2)	105732
2240	9.4	1.4	1.0	chr1	56819946	56820242	(192136180)	+	AluSx1	SINE/Alu	1	298	(14)	109566
217	25.1	13.3	0.0	chr1	56821458	56821577	(192134845)	+	MIR3	SINE/MIR	49	194	(74)	109570
17498	15.9	3.8	1.0	chr1	57682374	57684946	(191271476)	+	L1PA16	LINE/L1	7	2672	(3811)	111324
409	14.9	11.3	5.0	chr1	57966916	57967014	(190989408)	+	L1MB1	LINE/L1	6062	6167	(1)	111891
19	10.4	0.0	0.0	chr1	58577094	58577124	(190379298)	+	(CAG)n	Simple_repeat	1	31	(0)	113109
19	32.5	0.0	0.0	chr1	58782402	58782467	(190173955)	+	(CTG)n	Simple_repeat	1	66	(0)	113504
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
351	31.6	3.9	2.3	chr1	58814820	58814994	(190141428)	+	MIRb	SINE/MIR	45	222	(46)	113579
183	33.0	4.3	0.0	chr1	59084512	59084623	(189871799)	+	MIRc	SINE/MIR	13	129	(139)	114160
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
16	19.3	0.0	8.1	chr1	61742354	61742415	(187214007)	+	(CCCGCCC)n	Simple_repeat	1	62	(0)	118746
2512	5.2	0.0	0.0	chr1	62211684	62211972	(186744450)	+	AluY	SINE/Alu	1	289	(22)	119749
363	20.9	12.9	1.7	chr1	62435731	62435847	(186520575)	+	L2a	LINE/L2	3291	3422	(4)	120247
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
253	25.0	1.4	4.2	chr1	63773658	63773728	(185182694)	C	MIR3	SINE/MIR	(109)	99	31	122678
225	24.1	11.3	0.2	chr1	63773691	63773791	(185182631)	+	MIR3	SINE/MIR	38	149	(81)	122679
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
184	32.0	0.0	6.2	chr1	76503462	76503541	(172452881)	C	MamTip2	DNA/hAT-Tip100	(53)	252	178	141543
1762	21.8	7.5	8.5	chr1	78155026	78155591	(170800831)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	144192
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
14	18.1	0.0	4.9	chr1	85576601	85576608	(163379814)	+	(CCCACA)n	Simple_repeat	1	39	(0)	154397
19	14.2	0.0	0.0	chr1	85576609	85576639	(163379783)	+	(CA)n	Simple_repeat	1	31	(0)	154398
970	26.6	8.2	6.9	chr1	91631469	91632300	(157324122)	C	L2a	LINE/L2	(0)	3426	2579	163013
2233	11.8	0.0	0.3	chr1	91632335	91632631	(157323791)	+	AluSq	SINE/Alu	1	296	(17)	163014
602	30.7	14.9	0.8	chr1	91778672	91779222	(157177200)	C	L2a	LINE/L2	(5)	3421	2772	163230
865	26.8	3.7	0.0	chr1	91779241	91779475	(157176947)	C	MIR	SINE/MIR	(1)	261	18	163231
13	30.0	0.0	4.5	chr1	92480818	92480883	(156475539)	+	(CCGGCCG)n	Simple_repeat	1	66	(0)	164559
4362	13.7	2.0	0.1	chr1	93296653	93297338	(155659084)	C	L1M1	LINE/L1	(6851)	714	16	166056
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
333	15.9	11.5	1.4	chr1	94113386	94113455	(154842967)	C	MER5A1	DNA/hAT-Charlie	(52)	114	37	167301
368	30.9	6.1	0.7	chr1	94113487	94113626	(154842796)	C	MIRc	SINE/MIR	(120)	148	1	167302
845	20.7	2.9	2.9	chr1	94888018	94888226	(154068196)	C	MIR	SINE/MIR	(46)	216	8	168455
11	18.1	2.4	4.8	chr1	94927015	94927055	(154029367)	+	(GGCGCG)n	Simple_repeat	1	42	(0)	168516
13	23.7	1.9	3.7	chr1	94927275	94927327	(154029095)	+	(CCCGCC)n	Simple_repeat	1	54	(0)	168517
16	8.6	7.5	2.3	chr1	98048583	98048622	(150907800)	+	(CCTCCAC)n	Simple_repeat	1	43	(0)	172871
3412	16.9	23.2	8.2	chr1	99146248	99147315	(149809107)	+	MER52C	LTR/ERV1	1	1278	(0)	174431
15	20.3	4.4	0.0	chr1	108661127	108661171	(140295251)	+	(CCGCGC)n	Simple_repeat	1	47	(0)	187089
13	25.9	0.0	8.6	chr1	110674722	110674802	(138281620)	+	G-rich	Low_complexity	1	81	(0)	190557
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
3539	5.8	0.0	0.7	chr1	114037075	114037525	(134918897)	+	LTR7	LTR/ERV1	1	448	(2)	195972
4713	13.8	1.8	0.3	chr1	114037526	114037796	(134918626)	C	MER50	LTR/ERV1	(453)	281	1	195971
12	29.7	2.0	0.0	chr1	114152931	114152979	(134803443)	+	GA-rich	Low_complexity	1	50	(0)	196142
16	23.3	0.0	0.0	chr1	114152988	114153032	(134803390)	+	(C)n	Simple_repeat	1	45	(0)	196143
3211	17.6	3.2	7.8	chr1	119341774	119342499	(129613923)	C	LTR8	LTR/ERV1	(0)	691	1	203994
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
202	28.4	8.7	4.0	chr1	147242302	147242400	(101714022)	+	L2b	LINE/L2	3271	3374	(1)	213841
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
2228	8.9	0.3	0.0	chr1	148335176	148335467	(100620955)	C	AluSx	SINE/Alu	(19)	293	1	215517
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
12	24.1	0.0	0.0	chr1	153678256	153678289	(95278133)	+	(CACA)n	Simple_repeat	1	34	(0)	224528
27	14.0	0.0	0.0	chr1	153679142	153679188	(95277234)	+	(CTG)n	Simple_repeat	1	47	(0)	224530
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
443	26.6	4.0	9.7	chr1	154559240	154559476	(94396946)	+	MIRc	SINE/MIR	20	242	(26)	226416
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
12	18.3	0.0	3.0	chr1	155255459	155255491	(93700931)	+	G-rich	Low_complexity	1	33	(0)	227628
22	16.2	2.0	2.0	chr1	156076889	156076938	(92879484)	+	GA-rich	Low_complexity	1	51	(0)	229430
338	29.2	3.0	0.0	chr1	156283370	156283465	(92672957)	C	L2b	LINE/L2	(16)	3359	3261	229846
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
13	15.7	2.7	2.7	chr1	156500883	156500931	(92455491)	+	G-rich	Low_complexity	1	49	(0)	230238
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
2494	6.0	0.0	0.0	chr1	156505620	156505917	(92450505)	+	AluSx4	SINE/Alu	2	299	(11)	230245
13	22.3	0.0	2.6	chr1	156876582	156876620	(92079802)	+	(CCTGGC)n	Simple_repeat	1	39	(0)	230913
239	27.5	2.8	0.0	chr1	156876681	156876749	(92079673)	C	L2c	LINE/L2	(59)	3328	3258	230914
214	21.5	0.0	0.0	chr1	156876930	156876973	(92079449)	C	L2c	LINE/L2	(12)	3375	3320	230915
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
37	21.5	4.5	0.9	chr1	159188235	159188344	(89768078)	+	(CTCCCCT)n	Simple_repeat	1	115	(0)	234014
13	18.3	2.6	2.5	chr1	159855135	159855173	(89101249)	+	(CCTCGA)n	Simple_repeat	1	40	(0)	234855
223	33.3	7.4	1.1	chr1	160170454	160170541	(88785881)	C	MIRc	SINE/MIR	(87)	181	88	235352
2184	11.5	0.0	0.3	chr1	160170580	160170884	(88785538)	C	AluSz	SINE/Alu	(8)	304	1	235355
23	21.7	2.5	3.7	chr1	160262403	160262482	(88693940)	+	(CCACCG)n	Simple_repeat	1	82	(0)	235489
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
24	11.2	0.0	0.0	chr1	160410676	160410715	(88545707)	+	(ACAC)n	Simple_repeat	1	40	(0)	235714
6789	10.8	0.8	1.0	chr1	160652139	160653095	(88303327)	+	LTR5_Hs	LTR/ERVK	1	955	(13)	236079
294	28.1	10.7	1.8	chr1	160665875	160666044	(88290378)	C	L2c	LINE/L2	(243)	3144	2958	236094
13	9.7	0.0	0.0	chr1	161306389	161306410	(87650012)	+	(AGC)n	Simple_repeat	1	22	(0)	237266
13	17.2	4.9	2.3	chr1	161389847	161389887	(87566535)	+	(CTCCG)n	Simple_repeat	1	43	(0)	237441
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
2252	11.2	1.7	0.3	chr1	173862266	173862550	(75093872)	C	AluSg	SINE/Alu	(21)	289	1	256233
1757	13.4	2.4	0.4	chr1	173862551	173862796	(75093626)	C	AluSx1	SINE/Alu	(16)	296	46	256234
31	3.1	0.0	0.0	chr1	174799759	174799791	(74156631)	+	(GCA)n	Simple_repeat	1	33	(0)	257708
57	0.0	0.0	0.0	chr1	174799931	174799979	(74156443)	+	(CA)n	Simple_repeat	1	49	(0)	257709
211	27.5	3.6	2.4	chr1	175865694	175865775	(73090647)	C	MIR3	SINE/MIR	(17)	191	109	259352
370	22.2	0.0	1.2	chr1	175887938	175888019	(73068403)	C	MER5A	DNA/hAT-Charlie	(0)	189	109	259395
281	26.0	3.7	1.9	chr1	179087686	179087791	(69868631)	C	MER5A	DNA/hAT-Charlie	(3)	186	79	264120
4031	19.2	7.0	1.0	chr1	180922656	180923467	(68032955)	C	MER21B	LTR/ERVL	(4)	864	1	267175
18	19.2	2.7	6.6	chr1	181105313	181105386	(67851036)	+	(GCGCGG)n	Simple_repeat	1	76	(0)	267473
11	10.2	2.7	7.9	chr1	181482618	181482654	(67473768)	+	(GCCTCT)n	Simple_repeat	1	38	(0)	268056
17	29.0	0.0	1.7	chr1	181482800	181482859	(67473563)	+	(CGCC)n	Simple_repeat	1	60	(0)	268057
264	28.8	12.6	0.0	chr1	182942537	182942647	(66013775)	C	Charlie18a	DNA/hAT-Charlie	(212)	130	4	270303
14	11.3	3.5	0.0	chr1	183023367	183023395	(65933027)	+	(ACCCC)n	Simple_repeat	1	30	(0)	270461
13	12.2	3.7	0.0	chr1	192808661	192808687	(56147735)	+	(CGC)n	Simple_repeat	1	28	(0)	283883
594	28.6	11.1	0.9	chr1	196878354	196878579	(52077843)	+	MIRb	SINE/MIR	17	268	(0)	289194
329	28.6	3.8	7.2	chr1	201309567	201309732	(47646690)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3652	295814
450	25.3	10.6	0.5	chr1	201309738	201309909	(47646513)	+	MER20B	DNA/hAT-Charlie	32	219	(0)	295815
11	14.4	7.5	2.3	chr1	201399325	201399364	(47557058)	+	(GGCCGCC)n	Simple_repeat	1	43	(0)	295946
194	27.1	11.1	4.0	chr1	201482368	201482467	(47473955)	C	L2b	LINE/L2	(15)	3360	3253	296102
749	6.8	0.0	3.7	chr1	202692991	202693097	(46263325)	C	L1PB1	LINE/L1	(1)	6150	6048	298322
16	23.6	1.7	3.4	chr1	204073047	204073104	(44883318)	+	(CCCT)n	Simple_repeat	1	59	(0)	300927
11	16.4	5.9	0.0	chr1	204073214	204073247	(44883175)	+	(GAGCTCA)n	Simple_repeat	1	36	(0)	300928
2096	11.2	0.0	1.1	chr1	204077794	204078114	(44878308)	C	AluSz	SINE/Alu	(0)	312	1	300940
2392	8.9	0.0	0.3	chr1	204079344	204079646	(44876776)	C	AluSx	SINE/Alu	(10)	302	1	300942
12	13.1	0.0	9.8	chr1	205344084	205344124	(43612298)	+	(CCCCCG)n	Simple_repeat	1	41	(0)	303253
225	30.2	1.1	7.5	chr1	205441713	205441805	(43514617)	C	L2c	LINE/L2	(1)	3386	3300	303445
31	0.0	0.0	3.0	chr1	205504601	205504633	(43451789)	+	(TCC)n	Simple_repeat	1	33	(0)	303573
287	29.9	4.5	3.9	chr1	205519462	205519614	(43436808)	C	L3b	LINE/CR1	(154)	5078	4925	303596
12	17.6	0.0	0.0	chr1	209384131	209384157	(39572265)	+	(TCTC)n	Simple_repeat	1	27	(0)	309563
797	26.6	8.3	4.8	chr1	210373543	210373878	(38582544)	C	LTR82A	LTR/ERVL	(58)	814	466	311067
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
19	0.0	6.7	0.0	chr1	211382660	211382689	(37573733)	+	(CCCCT)n	Simple_repeat	1	32	(0)	312613
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
12	27.1	2.3	0.0	chr1	212916960	212917003	(36039419)	+	(ACCCT)n	Simple_repeat	1	45	(0)	315426
24	12.0	0.0	0.0	chr1	218156910	218156945	(30799477)	+	(CT)n	Simple_repeat	1	36	(0)	322778
11	20.1	2.9	0.0	chr1	220690463	220690496	(28265926)	+	G-rich	Low_complexity	1	35	(0)	326595
3006	17.7	4.4	2.3	chr1	220747377	220748023	(28208399)	C	MER67B	LTR/ERV1	(0)	661	1	326675
180	18.4	0.0	2.6	chr1	221169498	221169536	(27786886)	C	L2	LINE/L2	(2592)	827	790	327258
262	36.9	1.3	4.8	chr1	221169774	221169938	(27786484)	+	MIR1_Amn	SINE/MIR	1	159	(71)	327259
871	20.2	1.2	0.0	chr1	223032286	223032453	(25923969)	+	MIR	SINE/MIR	23	192	(70)	330069
12	25.0	5.8	0.0	chr1	225940723	225940774	(23015648)	+	(GACCCTG)n	Simple_repeat	1	55	(0)	334856
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
20	16.4	0.0	0.0	chr1	228103264	228103304	(20853118)	+	(GCAACCC)n	Simple_repeat	1	41	(0)	338293
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
1561	17.9	1.6	4.7	chr1	229430487	229430805	(19525617)	+	AluJr	SINE/Alu	3	311	(1)	340254
201	24.5	5.8	2.0	chr1	230422467	230422516	(18533906)	+	L2	LINE/L2	95	146	(3273)	341847
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
2277	17.9	11.2	1.8	chr1	232143349	232143839	(16812583)	C	MER67A	LTR/ERV1	(0)	543	1	344563
607	24.5	10.5	6.7	chr1	232143887	232144232	(16812190)	+	Charlie7	DNA/hAT-Charlie	1501	1861	(751)	344564
21	16.6	0.0	0.0	chr1	232805548	232805588	(16150834)	+	GA-rich	Low_complexity	1	41	(0)	345472
13	13.1	4.1	7.8	chr1	233328323	233328376	(15628046)	+	(CCGC)n	Simple_repeat	1	51	(0)	346215
12	25.8	3.1	4.5	chr1	233328482	233328546	(15627876)	+	(GCGGCGC)n	Simple_repeat	1	67	(0)	346216
15	4.8	0.0	0.0	chr1	236065014	236065035	(12891387)	+	(CAG)n	Simple_repeat	1	22	(0)	350913
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
20	15.7	7.3	2.7	chr1	236686381	236686448	(12269974)	+	G-rich	Low_complexity	1	73	(0)	352104
3404	12.1	12.9	0.0	chr1	237239203	237239764	(11716658)	C	LTR9D	LTR/ERV1	(0)	645	1	352994
427	29.8	13.4	3.2	chr1	237864245	237864525	(11091897)	C	LTR88a	LTR/Gypsy?	(17)	799	486	353891
499	27.2	3.9	2.6	chr1	239061692	239061895	(9894527)	C	L1MEi	LINE/L1	(883)	1582	1233	355579
248	29.4	4.0	1.6	chr1	239062055	239062175	(9894247)	C	MLT1H	LTR/ERVL-MaLR	(396)	153	30	355580
5180	10.7	2.8	0.5	chr1	242211672	242212415	(6744007)	+	HERVK22-int	LTR/ERVK	2	762	(6075)	360634
748	13.2	0.0	0.0	chr1	243101895	243102000	(5854422)	+	AluSz6	SINE/Alu	184	289	(23)	362075
314	20.9	0.0	0.0	chr1	243102011	243102077	(5854345)	+	L1MB8	LINE/L1	6106	6172	(6)	362076
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
17905	12.9	2.5	1.6	chr1	244766490	244769209	(4187213)	C	L1M1	LINE/L1	(4714)	2851	99	364715
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
12	20.1	6.2	2.0	chr1	247332000	247332047	(1624375)	+	G-rich	Low_complexity	1	51	(0)	368975
253	20.3	14.8	0.0	chr10	394352	394420	(133403002)	+	L1M2	LINE/L1	5789	5869	(422)	371501
255	22.1	14.4	0.0	chr10	394419	394495	(133402927)	+	L1M2	LINE/L1	5782	5871	(420)	371501
234	21.7	4.2	4.2	chr10	690283	690354	(133107068)	+	MIRc	SINE/MIR	80	151	(117)	371735
892	26.3	2.3	8.9	chr10	3313570	3313940	(130483482)	+	L1MD3	LINE/L1	7035	7380	(615)	374923
12	9.1	4.2	0.0	chr10	3467373	3467396	(130330026)	+	(CAA)n	Simple_repeat	1	25	(0)	375140
19	16.8	0.0	2.4	chr10	3467717	3467758	(130329664)	+	(AAC)n	Simple_repeat	1	42	(0)	375141
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
13	9.2	2.4	9.3	chr10	6163681	6163722	(127633700)	+	G-rich	Low_complexity	1	43	(0)	379017
56	0.0	0.0	6.8	chr10	6580257	6580329	(127217093)	+	(GCGGGGCTG)n	Simple_repeat	1	73	(0)	379727
14	14.4	5.0	2.4	chr10	13299914	13299953	(120497469)	+	(GGCGCC)n	Simple_repeat	1	42	(0)	390494
25	8.6	0.0	0.0	chr10	13808971	13809008	(119988414)	+	(ACGC)n	Simple_repeat	1	38	(0)	391395
13	10.0	0.0	0.0	chr10	13882425	13882446	(119914976)	+	(GGA)n	Simple_repeat	1	22	(0)	391549
117	46.6	1.3	0.1	chr10	14449108	14449928	(119347494)	+	(CA)n	Simple_repeat	1	832	(0)	392476
711	9.9	0.0	2.2	chr10	14878087	14878177	(118919245)	+	AluJb	SINE/Alu	200	288	(24)	393216
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
3360	7.0	0.5	0.7	chr10	20370846	20371294	(113426128)	C	LTR7	LTR/ERV1	(2)	448	1	401982
9835	12.7	0.4	2.2	chr10	20371295	20371511	(113425911)	C	L1PB1	LINE/L1	(6400)	462	255	401981
1580	19.6	5.2	0.3	chr10	21417555	21417850	(112379572)	+	AluJb	SINE/Alu	1	311	(1)	403644
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
16	23.4	0.0	2.1	chr10	22003596	22003642	(111793780)	+	(GGCG)n	Simple_repeat	1	47	(0)	404667
13	23.3	3.0	5.8	chr10	27155282	27155348	(106642074)	+	G-rich	Low_complexity	1	69	(0)	412953
18	12.4	2.9	0.0	chr10	27252554	27252588	(106544834)	+	(GCC)n	Simple_repeat	1	36	(0)	413154
18	3.9	7.4	0.0	chr10	27252597	27252625	(106544797)	+	(GT)n	Simple_repeat	1	31	(0)	413155
13	13.5	4.3	6.2	chr10	27252856	27252901	(106544521)	+	(GCGCCGG)n	Simple_repeat	1	48	(0)	413156
18	17.8	0.0	4.2	chr10	28677444	28677491	(105119931)	+	G-rich	Low_complexity	1	48	(0)	415552
12	8.4	0.0	6.9	chr10	31031928	31031956	(102765466)	+	(GCCCC)n	Simple_repeat	1	29	(0)	419722
1704	17.5	3.8	0.0	chr10	31036090	31036369	(102761053)	C	AluJr	SINE/Alu	(21)	291	1	419730
26	10.1	1.6	6.5	chr10	31319141	31319201	(102478221)	+	G-rich	Low_complexity	1	62	(0)	420164
12	16.8	0.0	0.0	chr10	31760228	31760254	(102037168)	+	(CCGCC)n	Simple_repeat	1	27	(0)	420705
5638	10.6	16.7	3.3	chr10	34426793	34427856	(99369566)	+	MER11B	LTR/ERVK	1	1236	(0)	424703
11	20.1	9.1	2.8	chr10	35127069	35127134	(98670288)	+	(GCCGGCT)n	Simple_repeat	1	72	(0)	426040
17	20.1	3.5	7.8	chr10	35127230	35127316	(98670106)	+	(AGCGG)n	Simple_repeat	1	90	(0)	426041
37	27.4	3.7	4.1	chr10	35640753	35640941	(98156481)	+	(GCC)n	Simple_repeat	1	196	(0)	426868
27	16.4	5.6	4.3	chr10	35640872	35640960	(98156462)	+	(CGG)n	Simple_repeat	1	94	(0)	426869
1198	25.5	8.8	0.9	chr10	36647162	36647614	(97149808)	+	MLT1D	LTR/ERVL-MaLR	1	485	(20)	428332
229	29.5	13.1	0.7	chr10	36647686	36647825	(97149597)	C	L2b	LINE/L2	(228)	3159	3000	428331
14	19.9	0.0	4.5	chr10	42951720	42951763	(90845659)	+	(GGCCA)n	Simple_repeat	1	44	(0)	432790
12471	10.7	1.7	2.7	chr10	44232714	44234189	(89563233)	C	L1PA8A	LINE/L1	(4935)	1548	56	434598
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
267	34.9	2.7	0.9	chr10	44858023	44858132	(88939290)	C	MIRc	SINE/MIR	(27)	241	130	435318
290	35.4	6.2	7.0	chr10	44924957	44925169	(88872253)	C	MIRb	SINE/MIR	(7)	261	51	435421
26	0.0	6.2	0.0	chr10	44959722	44959753	(88837669)	+	(GGGGCGA)n	Simple_repeat	1	34	(0)	435466
12	24.7	4.4	4.2	chr10	46556178	46556245	(87241177)	+	G-rich	Low_complexity	1	71	(0)	437854
11	18.2	2.4	4.8	chr10	48671614	48671654	(85125768)	+	(AGGCAC)n	Simple_repeat	1	42	(0)	440862
244	21.3	5.1	7.4	chr10	48671846	48671926	(85125496)	C	L1M3de	LINE/L1	(5662)	991	913	440863
306	25.8	0.0	6.1	chr10	49762596	49762694	(84034728)	+	MIRb	SINE/MIR	130	222	(46)	442268
25811	5.5	0.5	0.0	chr10	50782475	50788587	(83008835)	C	L1PA4	LINE/L1	(16)	6139	1	443872
14	34.1	0.0	0.0	chr10	51074669	51074730	(82722692)	+	(GAGCTG)n	Simple_repeat	1	62	(0)	444311
418	21.1	6.3	8.0	chr10	52778388	52778613	(81018809)	C	LTR41B	LTR/ERVL	(197)	561	340	446759
622	19.1	6.0	1.3	chr10	52778864	52779022	(81018400)	C	LTR41B	LTR/ERVL	(591)	167	1	446759
381	22.1	3.7	3.7	chr10	52908629	52908736	(80888686)	+	MER103C	DNA/hAT-Charlie	62	169	(128)	446905
359	31.8	5.8	3.5	chr10	52908749	52908913	(80888509)	C	MIR	SINE/MIR	(0)	262	88	446906
1963	16.3	10.8	0.3	chr10	52908914	52909295	(80888127)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	446907
11	22.4	3.5	5.1	chr10	55631132	55631188	(78166234)	+	(GCCCTCG)n	Simple_repeat	1	59	(0)	450426
26904	3.1	0.1	0.3	chr10	55899642	55905708	(77891714)	+	L1PA3	LINE/L1	126	6155	(0)	450765
3424	17.1	4.6	1.0	chr10	57788071	57788660	(76008762)	+	LTR9	LTR/ERV1	1	612	(0)	453164
761	8.5	1.9	0.0	chr10	57788664	57788769	(76008653)	+	HUERS-P3b-int	LTR/ERV1	4	111	(8808)	453164
23802	16.8	11.1	10.4	chr10	57788774	57791274	(76006148)	+	HUERS-P3b-int	LTR/ERV1	266	2969	(5950)	453164
14	14.4	5.0	2.4	chr10	59362668	59362707	(74434715)	+	G-rich	Low_complexity	1	42	(0)	455458
13	20.3	0.0	4.7	chr10	62818928	62818970	(70978452)	+	G-rich	Low_complexity	1	43	(0)	460647
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
209	27.1	19.8	0.0	chr10	69568833	69568917	(64228505)	C	MIR3	SINE/MIR	(30)	178	73	471868
558	25.7	10.1	0.0	chr10	70455186	70455337	(63342085)	C	MIR	SINE/MIR	(66)	196	28	473498
16	16.3	0.0	2.8	chr10	77638451	77638486	(56158936)	+	(GCA)n	Simple_repeat	1	36	(0)	486312
597	26.7	14.0	0.0	chr10	77878212	77878402	(55919020)	+	MIR	SINE/MIR	27	248	(14)	486730
130	36.2	3.3	2.9	chr10	78139176	78139269	(55658153)	+	(ATGTGT)n	Simple_repeat	6	99	(0)	487252
14	13.1	0.0	0.0	chr10	78139416	78139441	(55657981)	+	(CTCC)n	Simple_repeat	1	26	(0)	487253
30	16.5	0.0	5.3	chr10	86366807	86366881	(47430541)	+	(CCCCT)n	Simple_repeat	1	75	(0)	499372
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
961	23.1	6.0	0.8	chr10	86377574	86377809	(47419613)	C	MIR	SINE/MIR	(3)	259	11	499386
2299	7.8	2.6	0.0	chr10	86389087	86389380	(47408042)	+	AluSz	SINE/Alu	1	302	(10)	499406
643	25.4	19.1	6.1	chr10	86389381	86389495	(47407927)	+	L2a	LINE/L2	3277	3423	(3)	499403
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
22	30.2	2.0	2.9	chr10	87863717	87863818	(45933604)	+	(CGG)n	Simple_repeat	1	104	(0)	501932
382	33.6	3.9	2.6	chr10	89533918	89534097	(44263325)	+	MIR3	SINE/MIR	2	183	(25)	504529
6304	15.8	2.1	8.1	chr10	91744962	91745444	(42051978)	+	L1M3f	LINE/L1	1494	1947	(4618)	507786
1511	20.9	4.0	1.0	chr10	91745445	91745736	(42051686)	+	AluJo	SINE/Alu	2	302	(10)	507789
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
15	19.8	0.0	4.5	chr10	93994009	93994052	(39803370)	+	(GCG)n	Simple_repeat	1	44	(0)	512167
202	39.8	7.9	1.9	chr10	94066642	94067010	(39730412)	+	L2a	LINE/L2	1158	1550	(1869)	512313
4173	19.4	2.5	6.7	chr10	95132811	95133902	(38663520)	C	HUERS-P3-int	LTR/ERV1	(6351)	1067	23	513805
194	23.3	2.3	0.0	chr10	95411732	95411774	(38385648)	+	L2b	LINE/L2	3315	3358	(17)	514229
1914	16.8	2.6	0.0	chr10	95430177	95430479	(38366943)	+	AluJb	SINE/Alu	1	311	(1)	514256
212	33.3	8.9	0.0	chr10	96375419	96375541	(37421881)	+	MER91B	DNA/hAT-Tip100	18	152	(38)	515858
15	4.8	0.0	0.0	chr10	96513616	96513649	(37283773)	+	(GCA)n	Simple_repeat	1	34	(0)	516113
21	12.4	3.5	5.0	chr10	97185193	97185250	(36612172)	+	(GGTGCAG)n	Simple_repeat	1	60	(0)	517411
24	20.4	0.0	1.7	chr10	97334505	97334562	(36462860)	+	(TCC)n	Simple_repeat	1	58	(0)	517742
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
1590	13.7	3.6	7.0	chr10	97335203	97335515	(36461907)	C	AluJo	SINE/Alu	(10)	302	1	517744
106	2.0	0.0	0.0	chr10	97425913	97426014	(36371408)	+	(CCGCCCT)n	Simple_repeat	1	102	(0)	517968
293	33.3	2.8	0.0	chr10	97553977	97554081	(36243341)	+	MARNA	DNA/TcMar-Mariner	396	503	(83)	518212
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
14	18.2	0.0	0.0	chr10	97737144	97737174	(36060248)	+	(GCG)n	Simple_repeat	1	31	(0)	518629
15	0.0	0.0	0.0	chr10	97771188	97771204	(36026218)	+	(GT)n	Simple_repeat	1	17	(0)	518686
13	21.3	2.1	4.2	chr10	97771276	97771322	(36026100)	+	(GCG)n	Simple_repeat	1	48	(0)	518687
344	27.7	11.9	2.1	chr10	98309552	98309695	(35487727)	+	MIR3	SINE/MIR	3	162	(46)	519693
12	21.2	2.1	4.2	chr10	100009959	100010005	(33787417)	+	(CCGCCT)n	Simple_repeat	1	48	(0)	522513
386	23.3	11.9	4.3	chr10	100680702	100680840	(33116582)	+	MIRb	SINE/MIR	102	252	(16)	523795
19	27.1	4.0	0.0	chr10	101062594	101062669	(32734753)	+	(GCTGCC)n	Simple_repeat	1	79	(0)	524410
12	10.8	6.7	0.0	chr10	101830872	101830901	(31966521)	+	(GCACAT)n	Simple_repeat	1	32	(0)	525758
18	24.2	0.0	0.0	chr10	101830994	101831033	(31966389)	+	(CA)n	Simple_repeat	1	40	(0)	525759
19	19.2	0.0	0.0	chr10	102114877	102114918	(31682504)	+	(CACTCA)n	Simple_repeat	1	42	(0)	526320
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
17	17.7	6.6	3.1	chr10	102117635	102117695	(31679727)	+	(TCC)n	Simple_repeat	1	65	(0)	526326
16	24.3	2.7	5.2	chr10	102120412	102120486	(31676936)	+	(CGCTCC)n	Simple_repeat	1	77	(0)	526331
13	31.4	1.4	2.8	chr10	102120569	102120638	(31676784)	+	G-rich	Low_complexity	1	71	(0)	526332
15	13.7	7.5	0.0	chr10	102120787	102120826	(31676596)	+	(GAGCCG)n	Simple_repeat	1	43	(0)	526333
334	32.5	6.1	5.5	chr10	102399784	102399946	(31397476)	+	MIR	SINE/MIR	27	190	(72)	526858
19	4.3	0.0	0.0	chr10	102645212	102645235	(31152187)	+	(CA)n	Simple_repeat	1	24	(0)	527309
19	3.3	3.0	2.9	chr10	103277375	103277407	(30520015)	+	(CCTCGG)n	Simple_repeat	1	34	(0)	528586
12	25.1	4.3	0.0	chr10	103277411	103277457	(30519965)	+	(GCCGGCG)n	Simple_repeat	1	49	(0)	528587
546	31.0	3.9	0.6	chr10	103476926	103477097	(30320325)	+	LTR16C	LTR/ERVL	148	325	(164)	529044
404	26.7	2.2	0.5	chr10	103636879	103636992	(30160430)	+	MIRb	SINE/MIR	39	160	(102)	529339
347	26.4	2.2	0.0	chr10	103637045	103637131	(30160291)	C	L2b	LINE/L2	(5)	3370	3282	529340
756	25.5	9.3	1.0	chr10	103638522	103638727	(30158695)	+	MIR	SINE/MIR	1	225	(37)	529341
1334	15.9	7.2	2.3	chr10	103834300	103834602	(29962820)	+	L1MB8	LINE/L1	5859	6177	(1)	529737
12	26.1	0.0	4.1	chr10	103966960	103967008	(29830414)	+	(CACCCCG)n	Simple_repeat	1	49	(0)	529996
17	24.7	3.3	3.2	chr10	104121880	104121940	(29675482)	+	(CG)n	Simple_repeat	1	63	(0)	530197
36	8.9	0.0	0.0	chr10	104329044	104329092	(29468330)	+	(CA)n	Simple_repeat	1	49	(0)	530536
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
588	28.7	4.2	2.3	chr10	110487062	110487364	(23310058)	C	L1ME4c	LINE/L1	(200)	630	322	539618
12	22.6	2.3	2.3	chr10	110497915	110497957	(23299465)	+	G-rich	Low_complexity	1	44	(0)	539647
19	2.6	6.8	6.4	chr10	110498077	110498121	(23299301)	+	(GCG)n	Simple_repeat	1	45	(0)	539648
19	27.0	2.4	3.5	chr10	116849782	116849866	(16947556)	+	(CCTGCG)n	Simple_repeat	1	87	(0)	549480
15	0.0	0.0	0.0	chr10	119028767	119028783	(14768639)	+	(AC)n	Simple_repeat	1	17	(0)	553068
19	10.0	0.0	0.0	chr10	119818781	119818812	(13978610)	+	(GACG)n	Simple_repeat	1	32	(0)	554648
12	18.1	6.3	6.0	chr10	119872594	119872656	(13924766)	+	(GGCC)n	Simple_repeat	1	67	(0)	554723
26	20.4	2.6	2.5	chr10	119872895	119872905	(13924517)	+	(GCGCG)n	Simple_repeat	1	78	(0)	554724
19	15.8	9.2	1.4	chr10	119872906	119872970	(13924452)	+	(GGC)n	Simple_repeat	1	71	(0)	554725
328	33.3	5.5	0.0	chr10	120131540	120131692	(13665730)	C	MLT1K	LTR/ERVL-MaLR	(15)	580	419	555183
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
315	25.3	0.0	0.0	chr10	123582579	123582653	(10214769)	+	MIRc	SINE/MIR	64	138	(130)	560555
2384	6.0	0.4	0.0	chr10	123659216	123659496	(10137926)	C	AluSq2	SINE/Alu	(31)	282	1	560700
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
12	27.3	2.0	2.0	chr10	124916806	124916855	(8880567)	+	(GGC)n	Simple_repeat	1	51	(0)	562764
16	10.1	2.9	2.9	chr10	124917084	124917117	(8880305)	+	(GGC)n	Simple_repeat	1	35	(0)	562765
16	22.2	2.1	0.0	chr10	125151888	125151934	(8645488)	+	G-rich	Low_complexity	1	48	(0)	563042
16	15.3	0.0	5.0	chr10	125161208	125161247	(8636175)	+	(GCGG)n	Simple_repeat	1	40	(0)	563054
21	23.9	0.0	4.3	chr10	128126376	128126444	(5670978)	+	(CCGC)n	Simple_repeat	1	69	(0)	567033
14	14.8	1.9	9.1	chr10	128126533	128126586	(5670836)	+	G-rich	Low_complexity	1	55	(0)	567034
2047	12.3	3.2	0.0	chr10	128126791	128127090	(5670332)	+	AluJb	SINE/Alu	1	310	(2)	567035
18	24.5	0.0	4.8	chr10	130136409	130136471	(3660951)	+	(GGC)n	Simple_repeat	1	63	(0)	569159
19	18.0	5.2	1.6	chr10	130136516	130136573	(3660849)	+	G-rich	Low_complexity	1	61	(0)	569160
857	7.2	1.4	13.7	chr10	132001167	132001279	(1796143)	+	MER4E1	LTR/ERV1	680	780	(1)	571190
3206	11.1	16.1	0.6	chr10	132001507	132002041	(1795381)	+	MER51A	LTR/ERV1	1	634	(0)	571194
15	20.7	2.2	2.1	chr10	132419094	132419139	(1378283)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	571624
14	19.7	1.9	5.7	chr10	132537401	132537452	(1259970)	+	G-rich	Low_complexity	1	53	(0)	571754
203	31.9	18.8	0.4	chr10	132879060	132879289	(918133)	C	L2	LINE/L2	(1415)	2004	1723	572012
245	30.8	9.1	3.0	chr10	133100702	133100835	(696587)	C	L2b	LINE/L2	(0)	3375	3233	572166
100	38.0	3.6	4.8	chr10	133177142	133178224	(619198)	+	(TG)n	Simple_repeat	1	1122	(0)	572230
15	17.1	0.0	0.0	chr10	133378646	133378678	(418744)	+	(CACGCG)n	Simple_repeat	1	33	(0)	572460
2184	8.7	2.4	0.3	chr11	536488	536774	(134549848)	+	AluSz	SINE/Alu	1	293	(19)	573535
12	16.4	0.0	7.5	chr11	637192	637231	(134449391)	+	G-rich	Low_complexity	1	40	(0)	573670
785	33.8	2.6	2.5	chr11	944525	944954	(134141668)	C	L2a	LINE/L2	(116)	3310	2873	574152
121	12.7	7.5	1.9	chr11	1389655	1389947	(133696675)	+	(GGCTC)n	Simple_repeat	1	315	(0)	574575
36	0.0	0.0	0.0	chr11	1572177	1572209	(133514413)	+	(GGCTCG)n	Simple_repeat	1	33	(0)	574744
277	37.3	4.7	0.0	chr11	1694390	1694531	(133392091)	C	MIRb	SINE/MIR	(66)	202	54	574943
15	22.5	0.0	0.0	chr11	1832928	1832964	(133253658)	+	(CGCA)n	Simple_repeat	1	37	(0)	575155
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
19	11.2	5.8	3.6	chr11	2885520	2885571	(132201051)	+	GA-rich	Low_complexity	1	55	(0)	576274
35	17.9	3.9	3.8	chr11	2892561	2892662	(132193960)	+	(CCT)n	Simple_repeat	1	106	(0)	576289
28	5.8	0.0	0.0	chr11	2929454	2929489	(132157133)	+	(GCCCC)n	Simple_repeat	1	36	(0)	576321
273	33.8	8.2	0.0	chr11	3189667	3189816	(131896806)	C	MIRb	SINE/MIR	(73)	195	18	576696
16	21.4	0.0	2.4	chr11	3797483	3797523	(131289099)	+	(CCG)n	Simple_repeat	1	41	(0)	577720
13	16.6	7.3	0.0	chr11	3797686	3797726	(131288896)	+	GA-rich	Low_complexity	1	44	(0)	577721
735	21.8	2.8	2.2	chr11	6298876	6299053	(128787569)	+	MER92-int	LTR/ERV1	3748	3926	(1292)	581094
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
1118	29.1	14.4	4.2	chr11	6604474	6605505	(128481117)	C	L2c	LINE/L2	(209)	3178	2021	581572
273	20.0	3.9	3.9	chr11	8080944	8081021	(127005601)	C	MIRc	SINE/MIR	(94)	174	97	583476
380	31.4	16.6	4.1	chr11	8169152	8169668	(126916954)	+	L2	LINE/L2	2483	3077	(342)	583593
11	11.6	6.9	0.0	chr11	8328865	8328893	(126757729)	+	(TTCCTG)n	Simple_repeat	1	31	(0)	583843
11	21.8	2.2	4.3	chr11	8329260	8329305	(126757317)	+	G-rich	Low_complexity	1	47	(0)	583844
13	27.1	0.0	2.2	chr11	9573405	9573450	(125513172)	+	G-rich	Low_complexity	1	46	(0)	586106
12	21.1	0.0	7.8	chr11	9664024	9664074	(125422548)	+	G-rich	Low_complexity	1	51	(0)	586301
307	32.9	2.1	7.7	chr11	10352247	10352401	(124734221)	+	L2b	LINE/L2	3230	3375	(0)	587423
22	16.9	0.0	2.0	chr11	10451189	10451256	(124635366)	+	(TCCCTG)n	Simple_repeat	1	66	(0)	587573
341	30.9	2.3	0.8	chr11	10728997	10729123	(124357499)	C	LTR67B	LTR/ERVL	(12)	608	480	588022
841	21.7	4.6	1.0	chr11	10729275	10729483	(124357139)	C	LTR67B	LTR/ERVL	(390)	230	14	588022
24219	6.8	0.7	0.4	chr11	11691545	11694642	(123391980)	+	L1P2	LINE/L1	1	3085	(3061)	589591
22	12.4	2.2	2.1	chr11	12377459	12377504	(122709118)	+	GA-rich	Low_complexity	1	47	(0)	590686
11	24.6	4.0	1.9	chr11	12377559	12377608	(122709014)	+	(AGCCGC)n	Simple_repeat	1	52	(0)	590687
19	8.8	2.6	2.6	chr11	12674114	12674151	(122412471)	+	(CCGCC)n	Simple_repeat	1	39	(0)	591159
27	13.7	3.7	6.0	chr11	12674441	12674521	(122412101)	+	(CGCCG)n	Simple_repeat	1	84	(0)	591160
14	18.4	2.7	0.0	chr11	12724756	12724792	(122361830)	+	(TCCCC)n	Simple_repeat	1	38	(0)	591228
12	17.4	0.0	5.6	chr11	14381423	14381458	(120705164)	+	(GCCC)n	Simple_repeat	1	36	(0)	593805
13	30.2	0.0	6.9	chr11	14644665	14644751	(120441871)	+	(TGGTGC)n	Simple_repeat	1	87	(0)	594298
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
16	21.4	0.0	5.6	chr11	16925889	16925942	(118160680)	+	G-rich	Low_complexity	1	54	(0)	597709
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
311	25.5	11.3	0.0	chr11	19953694	19953787	(115132835)	+	MIRb	SINE/MIR	14	119	(149)	603114
12	21.8	1.9	5.6	chr11	20387639	20387691	(114698931)	+	(TCGCGC)n	Simple_repeat	1	54	(0)	603849
19	13.4	4.9	0.0	chr11	20596784	20596825	(114489797)	+	(TCT)n	Simple_repeat	1	44	(0)	604201
452	27.3	8.9	1.3	chr11	27445078	27445233	(107641389)	+	L2c	LINE/L2	3118	3286	(101)	613956
188	22.9	0.0	0.0	chr11	32334687	32334721	(102751901)	+	MER5A	DNA/hAT-Charlie	7	41	(148)	621413
2980	18.2	5.6	2.2	chr11	32334734	32335547	(102751075)	C	LTR28C	LTR/ERV1	(67)	832	1	621414
2496	7.2	0.3	0.0	chr11	33015348	33015654	(102070968)	C	AluSx1	SINE/Alu	(4)	308	1	622658
19	20.9	5.9	1.4	chr11	33257311	33257378	(101829244)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	623167
19	0.0	3.3	3.2	chr11	33257658	33257687	(101828935)	+	(AGC)n	Simple_repeat	1	31	(0)	623168
265	32.3	11.6	1.4	chr11	41498027	41498249	(93588373)	C	Mam_R4	LINE/Dong-R4	(1202)	2607	2359	635541
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
188	34.5	5.8	5.8	chr11	45098346	45098465	(89988157)	C	L2c	LINE/L2	(25)	3362	3243	641497
548	25.9	7.7	0.0	chr11	45098490	45098632	(89987990)	C	MIR	SINE/MIR	(96)	166	12	641498
13	18.9	8.3	0.0	chr11	45886385	45886432	(89200190)	+	(CCTGG)n	Simple_repeat	1	52	(0)	642972
13	4.1	8.0	0.0	chr11	45922400	45922424	(89164198)	+	(GGGCA)n	Simple_repeat	1	27	(0)	643027
216	31.0	6.3	2.2	chr11	45923240	45923392	(89163230)	+	MIR3	SINE/MIR	35	195	(35)	643030
278	26.9	5.7	1.5	chr11	45923606	45923699	(89162923)	+	MIRc	SINE/MIR	89	193	(75)	643031
376	28.0	12.9	1.0	chr11	47186762	47186974	(87899648)	C	MIRc	SINE/MIR	(3)	265	29	645395
31	0.0	3.0	0.0	chr11	47408554	47408586	(87678036)	+	(GGCCGGGC)n	Simple_repeat	1	34	(0)	645844
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
12	17.5	0.0	5.6	chr11	57649539	57649574	(77437048)	+	G-rich	Low_complexity	1	36	(0)	654196
35	14.8	2.9	1.4	chr11	57649705	57649773	(77436849)	+	(TC)n	Simple_repeat	1	71	(0)	654197
12	25.8	0.0	2.3	chr11	57649784	57649826	(77436796)	+	G-rich	Low_complexity	1	43	(0)	654198
12	15.9	2.6	5.0	chr11	60951527	60951565	(74135057)	+	(GCTCCGG)n	Simple_repeat	1	40	(0)	659166
11	27.6	0.0	0.0	chr11	61429967	61430005	(73656617)	+	(CCGCCCC)n	Simple_repeat	1	39	(0)	660145
371	26.1	15.9	1.3	chr11	61500042	61500196	(73586426)	C	MamGypLTR2c	LTR/Gypsy	(885)	183	2	660312
317	25.1	7.0	3.9	chr11	61567148	61567288	(73519334)	+	MIRc	SINE/MIR	44	198	(10)	660427
16	6.5	2.8	5.4	chr11	61815161	61815196	(73271426)	+	(GGGGCC)n	Simple_repeat	1	37	(0)	660879
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1491	12.8	13.2	0.4	chr11	62666066	62666323	(72420299)	+	AluJo	SINE/Alu	1	296	(16)	662526
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
26103	2.7	0.1	0.0	chr11	63435304	63441326	(71645296)	+	L1PA2	LINE/L1	124	6154	(1)	663695
18	10.4	0.0	0.0	chr11	63613963	63613993	(71472629)	+	(CCCCG)n	Simple_repeat	1	31	(0)	664006
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
12	12.6	0.0	3.6	chr11	63919586	63919613	(71167009)	+	G-rich	Low_complexity	1	28	(0)	664648
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
370	22.6	2.3	8.6	chr11	64449345	64449484	(70637138)	+	LTR78	LTR/ERV1	248	378	(926)	665649
18	25.2	4.8	2.3	chr11	64778514	64778620	(70308002)	+	(GCGGCGG)n	Simple_repeat	1	109	(0)	666183
15	19.1	1.9	5.6	chr11	64778569	64778621	(70308001)	+	G-rich	Low_complexity	1	54	(0)	666184
26	0.0	0.0	0.0	chr11	65833561	65833585	(69253037)	+	(CTTCCC)n	Simple_repeat	1	25	(0)	668265
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
22	24.2	1.9	6.5	chr11	65919124	65919228	(69167394)	+	G-rich	Low_complexity	1	107	(0)	668433
15	15.9	2.9	0.0	chr11	66466274	66466308	(68620314)	+	GA-rich	Low_complexity	1	36	(0)	669579
18	21.9	0.0	0.0	chr11	66843351	66843393	(68243229)	+	G-rich	Low_complexity	1	43	(0)	670370
22	26.8	3.8	0.0	chr11	66856356	66856435	(68230187)	+	G-rich	Low_complexity	1	83	(0)	670383
13	19.8	0.0	2.7	chr11	67023533	67023569	(68063053)	+	G-rich	Low_complexity	1	37	(0)	670751
203	24.6	4.2	4.2	chr11	67391620	67391691	(67694931)	C	MIRc	SINE/MIR	(184)	84	13	671564
13	21.7	2.6	0.0	chr11	67391937	67391974	(67694648)	+	G-rich	Low_complexity	1	39	(0)	671565
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
685	21.2	9.4	0.0	chr11	67508964	67509147	(67577475)	+	MIR	SINE/MIR	10	212	(50)	671764
12	25.5	0.0	0.0	chr11	67606676	67606712	(67479910)	+	(GAGC)n	Simple_repeat	1	37	(0)	671985
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
17	0.0	4.0	0.0	chr11	69700767	69700791	(65385831)	+	(CCAGG)n	Simple_repeat	1	26	(0)	675530
14	31.5	1.6	1.5	chr11	69818160	69818223	(65268399)	+	(GGC)n	Simple_repeat	1	65	(0)	675772
233	34.1	8.1	0.6	chr11	69892871	69893041	(65193581)	C	LTR33	LTR/ERVL	(328)	187	3	675909
12	26.1	1.8	3.5	chr11	70815158	70815175	(64271447)	+	GA-rich	Low_complexity	1	19	(0)	677404
73	0.0	0.0	0.0	chr11	70815176	70815237	(64271385)	+	(AC)n	Simple_repeat	1	62	(0)	677405
12	26.1	1.8	3.5	chr11	70815238	70815274	(64271348)	+	GA-rich	Low_complexity	20	54	(0)	677406
490	28.3	8.5	1.7	chr11	71343844	71344019	(63742603)	+	MIRb	SINE/MIR	26	214	(54)	678095
12	30.5	2.2	5.4	chr11	71787350	71787439	(63299183)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	678781
15	10.7	0.0	5.9	chr11	72238056	72238089	(62848533)	+	G-rich	Low_complexity	1	34	(0)	679593
544	28.9	11.8	0.0	chr11	72652617	72652803	(62433819)	C	MIRb	SINE/MIR	(48)	220	9	680339
699	31.1	20.8	1.9	chr11	73200101	73200588	(61886034)	+	L3	LINE/CR1	3140	3723	(376)	681369
294	29.0	16.4	0.7	chr11	73647967	73648105	(61438517)	+	MIRc	SINE/MIR	50	214	(54)	682325
19	25.4	0.0	0.0	chr11	75668888	75668938	(59417684)	+	(GCC)n	Simple_repeat	1	51	(0)	686539
21	15.5	0.0	0.0	chr11	76782958	76782993	(58303629)	+	(CA)n	Simple_repeat	1	36	(0)	688673
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
11	14.1	10.3	0.0	chr11	76783236	76783274	(58303348)	+	(CGCCCGG)n	Simple_repeat	1	43	(0)	688675
415	25.9	12.1	1.5	chr11	76799631	76799763	(58286859)	+	MIRb	SINE/MIR	21	169	(99)	688699
16	17.7	1.7	6.8	chr11	76860858	76860921	(58225701)	+	(GGCCG)n	Simple_repeat	1	60	(0)	688820
16	13.1	0.0	5.4	chr11	76860956	76860992	(58225630)	+	(GGC)n	Simple_repeat	1	37	(0)	688821
213	27.6	5.4	2.2	chr11	77147509	77147597	(57939025)	+	MIRc	SINE/MIR	115	206	(62)	689343
29	20.3	2.2	4.3	chr11	77147958	77148049	(57938573)	+	(CCGCC)n	Simple_repeat	1	94	(0)	689344
610	28.6	1.9	5.4	chr11	78941094	78941316	(56145306)	+	MIRb	SINE/MIR	18	232	(36)	692950
2942	21.8	11.1	8.5	chr11	85472598	85473331	(49613291)	+	LTR27E	LTR/ERV1	325	1077	(0)	703917
369	25.9	2.8	0.6	chr11	85810838	85810962	(49275660)	C	MIR3	SINE/MIR	(49)	159	42	704417
24	24.2	1.9	5.7	chr11	85811241	85811343	(49275279)	+	(CGCCC)n	Simple_repeat	1	105	(0)	704418
218	28.4	3.9	0.0	chr11	85854743	85854816	(49231806)	C	MIR3	SINE/MIR	(47)	161	85	704507
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
22	18.7	1.5	4.5	chr11	86069367	86069432	(49017190)	+	G-rich	Low_complexity	1	67	(0)	704860
331	14.2	3.2	7.7	chr11	93330918	93331064	(41755558)	+	MIR	SINE/MIR	3	135	(133)	715439
2087	8.2	0.0	12.9	chr11	93661104	93661445	(41425177)	C	AluJb	SINE/Alu	(14)	298	1	715957
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
278	23.9	9.3	2.2	chr11	93785050	93785139	(41301483)	+	MIRc	SINE/MIR	26	122	(146)	716167
378	27.5	14.1	1.6	chr11	93785198	93785389	(41301233)	C	L2	LINE/L2	(471)	2948	2729	716168
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
12	25.1	3.2	4.7	chr11	95067557	95067618	(40019004)	+	(GGC)n	Simple_repeat	1	64	(0)	718067
14	26.1	0.0	0.0	chr11	95231044	95231084	(39855538)	+	(GCG)n	Simple_repeat	1	41	(0)	718308
28	29.4	3.5	0.8	chr11	95231152	95231265	(39855357)	+	(GCC)n	Simple_repeat	1	118	(0)	718309
18	0.0	4.3	0.0	chr11	100719665	100719687	(34366935)	+	(TG)n	Simple_repeat	1	24	(0)	725416
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
2499	8.9	0.0	0.0	chr11	102612724	102613036	(32473586)	C	AluSq2	SINE/Alu	(0)	313	1	728219
396	25.9	5.1	5.1	chr11	102613331	102613448	(32473174)	+	L2b	LINE/L2	3258	3375	(0)	728220
224	31.1	0.0	1.6	chr11	102613487	102613548	(32473074)	C	MER5A	DNA/hAT-Charlie	(0)	189	129	728221
192	32.1	0.0	0.0	chr11	102613546	102613598	(32473024)	+	MER5A	DNA/hAT-Charlie	115	167	(22)	728222
5758	6.9	0.1	2.0	chr11	103738891	103739704	(31346918)	+	L1PA3	LINE/L1	2	800	(5355)	729890
25191	3.5	0.0	0.2	chr11	103739707	103743731	(31342891)	+	L1PA3	LINE/L1	2168	6155	(0)	729890
10531	14.3	2.0	2.9	chr11	105958720	105961070	(29125552)	C	L1PA10	LINE/L1	(4128)	2355	4	732898
14	24.0	0.0	0.0	chr11	107018434	107018472	(28068150)	+	(GGCAGA)n	Simple_repeat	1	39	(0)	734326
20	20.3	4.5	5.4	chr11	107018505	107018592	(28068030)	+	(TCCC)n	Simple_repeat	1	92	(0)	734327
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
32	27.5	0.8	4.0	chr11	113314454	113314577	(21772045)	+	(CCCGGC)n	Simple_repeat	1	125	(0)	744365
8539	20.7	7.3	5.4	chr11	113847830	113849952	(21236670)	+	MER21-int	LTR/ERVL	919	3085	(1106)	745254
632	16.8	5.8	0.9	chr11	113849951	113850064	(21236558)	C	MER21-int	LTR/ERVL	(3013)	1178	1059	745255
1232	23.6	5.1	1.6	chr11	113850067	113850493	(21236129)	+	L1ME3D	LINE/L1	5435	5892	(231)	745256
13	17.3	3.6	3.5	chr11	115759907	115759954	(19326668)	+	G-rich	Low_complexity	1	48	(0)	748198
291	33.7	2.8	10.9	chr11	117316474	117316752	(17769870)	C	L2b	LINE/L2	(26)	3349	3062	750939
18	29.9	0.0	0.0	chr11	117986112	117986158	(17100464)	+	(CA)n	Simple_repeat	1	47	(0)	752104
15	11.3	4.1	3.9	chr11	118152814	118152857	(16933765)	+	G-rich	Low_complexity	1	44	(0)	752413
19	26.2	2.1	5.2	chr11	118152876	118152946	(16933676)	+	(GGAGCA)n	Simple_repeat	1	96	(0)	752414
19	18.3	1.9	3.7	chr11	118152901	118152953	(16933669)	+	GA-rich	Low_complexity	1	54	(0)	752415
12	0.0	4.3	4.2	chr11	118152947	118152969	(16933653)	+	(GAGC)n	Simple_repeat	1	24	(0)	752416
13	7.0	6.2	2.9	chr11	118634880	118634911	(16451711)	+	(CTCGCC)n	Simple_repeat	1	34	(0)	753264
13	18.5	2.6	2.5	chr11	118635059	118635097	(16451525)	+	(CCCCCGG)n	Simple_repeat	1	40	(0)	753265
12	3.9	3.1	9.1	chr11	118909223	118909254	(16177368)	+	(GGCA)n	Simple_repeat	1	33	(0)	753850
13	17.4	4.9	2.3	chr11	119168735	119168775	(15917847)	+	G-rich	Low_complexity	1	43	(0)	754377
181	23.3	2.3	2.3	chr11	119420666	119420709	(15665913)	+	MER5A	DNA/hAT-Charlie	111	154	(35)	754842
562	26.8	4.8	3.8	chr11	119518644	119518854	(15567768)	+	MIRb	SINE/MIR	43	254	(14)	755004
16	17.3	2.6	0.0	chr11	119518922	119518960	(15567662)	+	G-rich	Low_complexity	1	40	(0)	755005
20	21.6	0.0	3.5	chr11	119519188	119519221	(15567401)	+	(TGTGTG)n	Simple_repeat	1	58	(0)	755006
22	0.0	0.0	0.0	chr11	119519222	119519245	(15567377)	+	(TG)n	Simple_repeat	1	24	(0)	755007
11	6.1	14.7	0.0	chr11	119797285	119797318	(15289304)	+	(TGCACA)n	Simple_repeat	1	39	(0)	755483
909	23.6	5.1	2.0	chr11	121082670	121082916	(14003706)	C	LTR67B	LTR/ERVL	(42)	578	324	757643
19	17.6	5.9	0.0	chr11	121452172	121452222	(13634400)	+	(GGC)n	Simple_repeat	1	54	(0)	758141
30	26.3	3.4	2.4	chr11	121452223	121452262	(13634360)	+	(CGGCG)n	Simple_repeat	50	123	(0)	758140
266	24.4	4.3	1.1	chr11	121722234	121722324	(13364298)	+	MIRc	SINE/MIR	174	267	(1)	758529
7088	7.3	14.7	6.9	chr11	122556641	122557789	(12528833)	+	LTR12D	LTR/ERV1	1	1254	(0)	759744
266	27.3	0.0	0.0	chr11	123219628	123219704	(11866918)	C	L2c	LINE/L2	(25)	3362	3286	761105
433	22.7	1.6	1.6	chr11	123357761	123357881	(11728741)	+	MIR3	SINE/MIR	66	186	(22)	761387
18	17.5	3.6	3.5	chr11	123431170	123431224	(11655398)	+	(CGTCC)n	Simple_repeat	1	57	(0)	761531
305	21.1	0.0	1.4	chr11	123580541	123580612	(11506010)	+	MIR3	SINE/MIR	104	174	(34)	761825
31	20.8	0.0	0.0	chr11	123741468	123741535	(11345087)	+	(CCCGG)n	Simple_repeat	1	68	(0)	762084
12	21.8	1.9	5.6	chr11	124739781	124739833	(10346789)	+	(AGGAGC)n	Simple_repeat	1	54	(0)	763500
278	21.4	4.8	3.9	chr11	125570200	125570301	(9516321)	+	MIRc	SINE/MIR	46	148	(120)	764750
186	27.4	3.1	0.0	chr11	125941889	125941950	(9144672)	+	L3	LINE/CR1	3262	3325	(774)	765271
56	9.8	0.0	3.2	chr11	126147156	126147250	(8939372)	+	(CCCT)n	Simple_repeat	1	95	(0)	765595
277	35.3	5.6	9.1	chr11	126440638	126440955	(8645667)	C	L2c	LINE/L2	(0)	3387	3082	766096
17	13.0	7.1	0.0	chr11	128522439	128522480	(6564142)	+	G-rich	Low_complexity	1	45	(0)	769017
378	19.8	10.0	0.0	chr11	128734274	128734354	(6352268)	+	5S	rRNA	1	90	(31)	769314
13	4.3	3.9	3.7	chr11	128890657	128890682	(6195940)	+	(CGC)n	Simple_repeat	1	27	(0)	769532
28	27.2	0.7	6.4	chr11	130002074	130002225	(5084397)	+	(GCGCCCG)n	Simple_repeat	1	143	(0)	771150
800	17.1	5.4	10.3	chr11	130404246	130404382	(4682240)	+	MER5A	DNA/hAT-Charlie	5	140	(49)	771867
14	13.1	4.3	6.1	chr11	130427745	130427791	(4658831)	+	(TCTCCC)n	Simple_repeat	1	49	(0)	771900
34	8.0	1.8	1.8	chr11	133083111	133083165	(2003457)	+	(CA)n	Simple_repeat	1	56	(0)	775453
14	24.5	6.2	1.5	chr11	133579709	133579772	(1506850)	+	(GCA)n	Simple_repeat	1	68	(0)	776118
13	11.1	10.3	0.0	chr11	133579917	133579955	(1506667)	+	GA-rich	Low_complexity	1	43	(0)	776119
300	20.5	14.6	7.4	chr11	133787629	133787723	(1298899)	C	MER5B	DNA/hAT-Charlie	(4)	174	72	776381
2462	6.0	0.0	0.3	chr12	950290	950587	(132324722)	+	AluYm1	SINE/Alu	1	297	(14)	779754
4727	19.6	3.5	5.8	chr12	2004886	2006018	(131269291)	+	Charlie1a	DNA/hAT-Charlie	1	1106	(349)	781545
190	19.3	5.0	5.0	chr12	2057283	2057342	(131217967)	+	L2b	LINE/L2	3316	3375	(0)	781630
698	20.9	4.8	1.1	chr12	2653175	2653353	(130621956)	C	MIRb	SINE/MIR	(36)	232	47	782471
21	26.1	2.5	2.4	chr12	2795036	2795116	(130480193)	+	(CCGCGC)n	Simple_repeat	1	83	(0)	782670
1564	10.6	17.5	0.0	chr12	2813042	2813286	(130462023)	C	AluSx1	SINE/Alu	(15)	297	1	782699
2299	4.9	0.0	0.0	chr12	2945004	2945269	(130330040)	+	AluYk4	SINE/Alu	46	311	(0)	782979
194	34.7	7.1	8.5	chr12	3207958	3208086	(130067223)	+	MIRb	SINE/MIR	107	233	(35)	783501
500	27.9	33.4	3.8	chr12	4030307	4030742	(129244567)	C	L2c	LINE/L2	(47)	3340	2766	784811
11	21.5	6.0	1.9	chr12	4272316	4272365	(129002944)	+	(GCCCGC)n	Simple_repeat	1	53	(0)	785270
259	31.4	7.9	0.9	chr12	6204618	6204723	(127070586)	+	MIRb	SINE/MIR	120	233	(35)	788236
17	20.9	0.0	2.2	chr12	6323565	6323610	(126951699)	+	(CAGGAA)n	Simple_repeat	1	46	(0)	788477
13	19.6	0.0	0.0	chr12	6769610	6769639	(126505670)	+	GA-rich	Low_complexity	1	30	(0)	789352
23	14.5	0.0	0.0	chr12	6778615	6778652	(126496657)	+	(TC)n	Simple_repeat	1	38	(0)	789364
17	24.3	1.9	0.0	chr12	6778866	6778910	(126496399)	+	(CGCGCA)n	Simple_repeat	1	45	(0)	789365
31	3.3	0.0	0.0	chr12	6778911	6778941	(126496368)	+	(CA)n	Simple_repeat	1	31	(0)	789366
17	24.3	1.9	0.0	chr12	6778942	6778953	(126496356)	+	(CGCGCA)n	Simple_repeat	5	17	(0)	789367
13	19.5	0.0	2.7	chr12	6868047	6868083	(126407226)	+	(CCTGCGC)n	Simple_repeat	1	37	(0)	789531
393	27.4	12.7	0.0	chr12	6890867	6890990	(126384319)	C	MIRb	SINE/MIR	(70)	198	57	789581
13	28.0	0.0	3.6	chr12	6914395	6914449	(126360860)	+	(CCCCCTC)n	Simple_repeat	1	55	(0)	789639
32	23.2	1.0	3.1	chr12	6914534	6914629	(126360680)	+	(CGC)n	Simple_repeat	1	97	(0)	789640
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
1822	13.7	8.9	4.4	chr12	6944852	6945194	(126330115)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	1	789679
17	24.4	0.0	4.8	chr12	7091912	7091974	(126183335)	+	(CTCCC)n	Simple_repeat	1	63	(0)	789930
27	0.0	3.5	0.0	chr12	7108919	7108947	(126166362)	+	(CTG)n	Simple_repeat	1	30	(0)	789961
31	18.0	1.5	1.5	chr12	7108948	7109012	(126166297)	+	(GT)n	Simple_repeat	1	66	(0)	789962
21	25.4	0.0	0.0	chr12	7108989	7109039	(126166270)	+	GA-rich	Low_complexity	1	51	(0)	789963
14	14.5	5.0	2.4	chr12	7109056	7109095	(126166214)	+	(CTTCCT)n	Simple_repeat	1	42	(0)	789964
7666	13.0	2.8	1.2	chr12	7641855	7642913	(125632396)	+	HUERS-P3-int	LTR/ERV1	2164	3252	(5667)	790594
825	21.7	0.7	0.0	chr12	7642917	7643059	(125632250)	+	HUERS-P3-int	LTR/ERV1	4539	4682	(4237)	790594
4493	11.1	3.8	2.0	chr12	7643061	7643281	(125632028)	+	HUERS-P3-int	LTR/ERV1	4901	5127	(3792)	790594
2407	7.7	1.0	0.0	chr12	7643282	7643581	(125631728)	+	AluY	SINE/Alu	1	303	(8)	790598
185	32.3	4.4	1.5	chr12	7787741	7787806	(125487503)	+	L3	LINE/CR1	1672	1739	(2360)	791037
1810	23.6	18.8	4.2	chr12	7916935	7917439	(125357870)	+	LTR41B	LTR/ERVL	57	673	(85)	791375
2644	4.9	0.0	0.3	chr12	7960400	7960705	(125314604)	+	AluY	SINE/Alu	1	305	(6)	791487
2197	21.9	11.3	7.1	chr12	8681349	8682152	(124593157)	+	MER21C	LTR/ERVL	9	938	(0)	792706
20	4.3	0.0	0.0	chr12	8687818	8687841	(124587468)	+	(A)n	Simple_repeat	1	24	(0)	792724
424	23.7	18.7	0.5	chr12	9064134	9064279	(124211030)	+	MIR	SINE/MIR	3	174	(94)	793383
1537	20.4	7.8	0.9	chr12	9064280	9064729	(124210580)	+	MER52D	LTR/ERV1	5	488	(1635)	793384
424	31.1	5.2	2.4	chr12	10749885	10750070	(122525239)	+	MIR	SINE/MIR	1	189	(79)	795616
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
59	3.3	0.0	0.0	chr12	13000193	13000254	(120275055)	+	(GGCGGCAG)n	Simple_repeat	1	62	(0)	799225
15	12.1	3.9	7.4	chr12	13000268	13000319	(120274990)	+	(GGCAGA)n	Simple_repeat	1	54	(0)	799226
13	25.0	3.2	4.6	chr12	13255927	13256018	(120019291)	+	GA-rich	Low_complexity	1	90	(0)	799597
24	25.9	3.3	2.1	chr12	14365688	14365778	(118909531)	+	(GCG)n	Simple_repeat	1	94	(0)	801269
16	10.4	0.0	5.7	chr12	15882461	15882495	(117392814)	+	(CCCT)n	Simple_repeat	1	35	(0)	803443
21199	10.6	1.3	1.0	chr12	18890261	18896672	(114378637)	C	L1PA8A	LINE/L1	(1)	6445	4	807220
10535	9.0	2.3	6.3	chr12	19229266	19230910	(114044399)	C	LTR12C	LTR/ERV1	(0)	1579	3	807747
759	26.5	2.9	6.4	chr12	19437875	19438156	(113837153)	+	Charlie2b	DNA/hAT-Charlie	37	308	(2474)	808195
2219	17.7	14.6	3.9	chr12	19438162	19438884	(113836425)	+	Charlie2b	DNA/hAT-Charlie	1784	2597	(185)	808196
31	16.6	1.4	1.4	chr12	19439369	19439437	(113835872)	+	G-rich	Low_complexity	1	70	(0)	808198
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
13018	15.1	8.5	3.8	chr12	19481779	19483618	(113791691)	C	L1PB2	LINE/L1	(4878)	1985	2	808267
1153	32.2	10.2	4.2	chr12	20264724	20265323	(113009986)	C	LTR78B	LTR/ERV1	(405)	891	252	809421
14	28.6	3.1	1.5	chr12	22046170	22046234	(111229075)	+	G-rich	Low_complexity	1	67	(0)	811566
14	20.5	2.6	0.0	chr12	22625288	22625326	(110649983)	+	(CCGC)n	Simple_repeat	1	40	(0)	812441
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
19	23.4	5.6	3.2	chr12	25251107	25251196	(108024113)	+	G-rich	Low_complexity	1	95	(0)	816205
7020	16.9	15.0	2.3	chr12	25884058	25885899	(107389410)	+	MER52D	LTR/ERV1	7	2123	(0)	817150
20	8.0	0.0	0.0	chr12	26124959	26124985	(107150324)	+	(CA)n	Simple_repeat	1	27	(0)	817539
12	33.5	0.0	0.0	chr12	26125102	26125153	(107150156)	+	G-rich	Low_complexity	1	52	(0)	817540
189	20.8	4.0	0.0	chr12	26832755	26832802	(106442507)	+	Tigger19b	DNA/TcMar-Tigger	320	369	(181)	818544
12	8.9	4.2	0.0	chr12	26833030	26833053	(106442256)	+	(GCC)n	Simple_repeat	1	25	(0)	818545
15	8.9	7.9	2.4	chr12	26833099	26833136	(106442173)	+	(CTC)n	Simple_repeat	1	41	(0)	818546
26	7.1	0.0	4.2	chr12	29792982	29793029	(103482280)	+	(CAACATGCCA)n	Simple_repeat	1	48	(0)	822874
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
2416	9.6	0.7	0.3	chr12	32139559	32139859	(101135450)	C	AluSc	SINE/Alu	(7)	302	1	826910
2456	7.2	0.0	3.8	chr12	38904461	38904778	(94370531)	C	AluSx4	SINE/Alu	(4)	306	1	831697
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
561	27.6	6.0	0.3	chr12	42145087	42145286	(91130023)	+	MIRb	SINE/MIR	6	221	(47)	836073
19	12.8	2.9	0.0	chr12	44877134	44877167	(88398142)	+	GA-rich	Low_complexity	1	35	(0)	840017
12	9.7	0.0	0.0	chr12	44877167	44877188	(88398121)	+	(AAAT)n	Simple_repeat	1	22	(0)	840018
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
16	0.0	0.0	0.0	chr12	48925376	48925395	(84349914)	+	(AGC)n	Simple_repeat	1	20	(0)	846095
12	16.5	0.0	0.0	chr12	48925517	48925543	(84349766)	+	(GACGG)n	Simple_repeat	1	27	(0)	846096
13	25.2	2.4	0.0	chr12	48925552	48925593	(84349716)	+	(CTC)n	Simple_repeat	1	43	(0)	846097
12	15.3	3.5	0.0	chr12	48957329	48957357	(84317952)	+	(CGC)n	Simple_repeat	1	30	(0)	846157
13	19.4	8.8	2.7	chr12	49131483	49131550	(84143759)	+	(CCGAGCC)n	Simple_repeat	1	74	(0)	846446
22	21.4	1.3	6.2	chr12	49367401	49367479	(83907830)	+	(GGC)n	Simple_repeat	1	80	(0)	847046
13	29.6	0.0	3.5	chr12	49707465	49707521	(83567788)	+	(CCCT)n	Simple_repeat	1	57	(0)	847646
20	18.8	0.0	3.9	chr12	50505002	50505053	(82770256)	+	(GGC)n	Simple_repeat	1	52	(0)	849382
1828	14.3	6.1	0.6	chr12	50842484	50842841	(82432468)	C	MER31A	LTR/ERV1	(0)	485	107	850117
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
25	9.7	0.0	4.2	chr12	51270003	51270050	(82005259)	+	(CCCCGC)n	Simple_repeat	1	48	(0)	850995
14	16.4	2.9	0.0	chr12	52033165	52033198	(81242111)	+	(CCCCG)n	Simple_repeat	1	35	(0)	852344
56	0.0	2.0	0.0	chr12	52143914	52143964	(81131345)	+	(TG)n	Simple_repeat	1	52	(0)	852511
400	26.1	15.4	2.8	chr12	52171921	52172101	(81103208)	C	MIRb	SINE/MIR	(19)	249	42	852564
2293	6.6	2.0	0.3	chr12	52948488	52948789	(80326520)	C	AluSc	SINE/Alu	(2)	307	1	853734
12	4.3	8.3	0.0	chr12	52965426	52965449	(80309860)	+	(GAG)n	Simple_repeat	1	26	(0)	853781
15	23.4	3.3	7.4	chr12	53224717	53224808	(80050501)	+	(CCTGC)n	Simple_repeat	1	95	(0)	854286
12	12.9	0.0	9.8	chr12	53224983	53225023	(80050286)	+	(CCACT)n	Simple_repeat	1	41	(0)	854287
14	18.2	0.0	0.0	chr12	53452109	53452139	(79823170)	+	(CAG)n	Simple_repeat	1	31	(0)	854795
15	5.6	0.0	0.0	chr12	55830816	55830834	(77444475)	+	(CG)n	Simple_repeat	1	19	(0)	858324
22	15.1	0.0	0.0	chr12	55830834	55830870	(77444439)	+	(CA)n	Simple_repeat	1	37	(0)	858325
13	13.2	0.0	0.0	chr12	55974045	55974069	(77301240)	+	(GAG)n	Simple_repeat	1	25	(0)	858642
16	17.3	2.6	0.0	chr12	56158139	56158177	(77117132)	+	(CCCCCGA)n	Simple_repeat	1	40	(0)	858993
15	0.0	0.0	4.3	chr12	56266850	56266872	(77008437)	+	(CCTT)n	Simple_repeat	1	23	(0)	859192
16	15.4	2.8	0.0	chr12	57224992	57225027	(76050282)	+	(GGCCTG)n	Simple_repeat	1	37	(0)	860874
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
25	13.5	11.0	0.0	chr12	57846447	57846453	(75428856)	+	(GCTGG)n	Simple_repeat	1	80	(0)	861915
27	11.7	0.0	7.7	chr12	57846454	57846518	(75428791)	+	G-rich	Low_complexity	1	65	(0)	861916
56	0.0	0.0	0.0	chr12	59597223	59597270	(73678039)	+	(AC)n	Simple_repeat	1	48	(0)	864297
5286	23.1	7.1	6.1	chr12	62435156	62436892	(70838417)	+	L1M2	LINE/L1	10	1777	(5072)	867915
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
3514	14.1	10.0	2.4	chr12	62653795	62653959	(70621350)	+	MER50	LTR/ERV1	1	174	(560)	868270
1711	13.8	8.5	0.7	chr12	62653960	62654241	(70621068)	+	AluJb	SINE/Alu	1	306	(6)	868271
15	0.0	8.0	0.0	chr12	64759301	64759325	(68515984)	+	(CGGGA)n	Simple_repeat	1	27	(0)	871768
17	12.0	2.6	2.6	chr12	64824593	64824630	(68450679)	+	(CGCT)n	Simple_repeat	1	39	(0)	871866
16	13.6	2.2	6.4	chr12	65121355	65121400	(68153909)	+	GA-rich	Low_complexity	1	47	(0)	872296
46	29.5	1.9	0.0	chr12	65741513	65741668	(67533641)	+	(GGCGG)n	Simple_repeat	1	159	(0)	873260
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
2221	11.6	0.0	0.0	chr12	67875938	67876221	(65399088)	+	AluSg	SINE/Alu	2	285	(25)	876539
1272	16.8	5.2	0.8	chr12	67876286	67876543	(65398766)	+	MSTA	LTR/ERVL-MaLR	159	428	(0)	876540
21	20.5	5.5	4.2	chr12	68610765	68610855	(64664454)	+	(CCCGC)n	Simple_repeat	1	96	(0)	877715
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
2076	25.9	10.8	4.2	chr12	69358807	69359638	(63915671)	C	HAL1	LINE/L1	(358)	2149	1234	879124
14	23.2	1.9	3.6	chr12	69359672	69359725	(63915584)	+	(GCGCGT)n	Simple_repeat	1	55	(0)	879126
19	6.1	5.7	0.0	chr12	69738825	69738859	(63536450)	+	(GCTCCCG)n	Simple_repeat	1	37	(0)	879832
18	18.5	8.2	0.0	chr12	69738860	69738884	(63536425)	+	(CGCTCCCG)n	Simple_repeat	2	66	(0)	879833
1176	13.5	0.0	0.5	chr12	71947442	71947635	(61327674)	+	MER53	DNA/hAT	1	193	(0)	883126
16	27.9	1.5	2.9	chr12	72271577	72271644	(61003665)	+	(CCTC)n	Simple_repeat	1	69	(0)	883611
23	30.3	4.6	0.9	chr12	75390913	75391020	(57884289)	+	(CCTCTCC)n	Simple_repeat	1	113	(0)	887474
13	16.2	5.4	6.8	chr12	76764091	76764146	(56511163)	+	GA-rich	Low_complexity	1	59	(0)	889813
17	14.2	8.9	1.6	chr12	76764146	76764201	(56511108)	+	(GCTCGC)n	Simple_repeat	1	61	(0)	889814
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
18	15.6	0.0	0.0	chr12	77325016	77325051	(55950258)	+	(CCGCTC)n	Simple_repeat	1	36	(0)	890696
19	12.9	0.0	2.7	chr12	78864795	78864831	(54410478)	+	(GCA)n	Simple_repeat	1	37	(0)	892741
17	12.3	0.0	5.1	chr12	79689686	79689724	(53585585)	+	(GCCCG)n	Simple_repeat	1	39	(0)	893881
1960	23.6	5.3	2.0	chr12	84805422	84805910	(48469399)	+	MER67D	LTR/ERV1	1	506	(8)	900768
22	33.4	0.0	0.0	chr12	84912766	84912840	(48362469)	+	(GT)n	Simple_repeat	1	75	(0)	900920
9607	12.4	5.3	4.8	chr12	85004617	85006236	(48269073)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	901061
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
13	23.6	6.0	0.0	chr12	92929241	92929290	(40346019)	+	(GAGC)n	Simple_repeat	1	53	(0)	912350
14	15.9	0.0	0.0	chr12	93441980	93442007	(39833302)	+	(GCC)n	Simple_repeat	1	28	(0)	913433
15	27.2	0.0	2.0	chr12	93442319	93442369	(39832940)	+	(CATT)n	Simple_repeat	1	51	(0)	913434
13	0.0	0.0	0.0	chr12	94459808	94459824	(38815485)	+	(GGC)n	Simple_repeat	1	17	(0)	915224
12	19.3	8.5	0.0	chr12	94460065	94460111	(38815198)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	915225
13	8.1	3.6	3.5	chr12	95474285	95474312	(37800997)	+	GA-rich	Low_complexity	1	29	(0)	917299
26296	4.6	0.2	0.1	chr12	97603218	97609364	(35665945)	C	L1PA4	LINE/L1	(3)	6152	1	920925
23	13.8	0.0	0.0	chr12	98457029	98457068	(34818241)	+	(CAG)n	Simple_repeat	1	40	(0)	922247
660	26.7	14.6	7.2	chr12	98695538	98696094	(34579215)	C	HAL1	LINE/L1	(1854)	653	49	922793
1551	20.1	6.1	3.6	chr12	98696105	98696557	(34578752)	C	MSTA1	LTR/ERVL-MaLR	(31)	434	1	922798
13	18.9	2.8	0.0	chr12	100199988	100200023	(33075286)	+	(CCGCTGG)n	Simple_repeat	1	37	(0)	925059
17	28.4	0.0	1.8	chr12	100573651	100573707	(32701602)	+	(GGC)n	Simple_repeat	1	57	(0)	925852
336	25.2	5.0	4.4	chr12	100715871	100716039	(32559270)	C	MIRc	SINE/MIR	(63)	205	39	926067
563	23.5	0.7	6.2	chr12	103044283	103044427	(30230882)	+	MamSINE1	SINE/tRNA-RTE	25	161	(129)	930047
344	30.1	19.1	0.5	chr12	103044544	103044743	(30230566)	+	MIRb	SINE/MIR	2	247	(21)	930048
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
19	26.1	5.4	0.0	chr12	104064727	104064800	(29210509)	+	(GGC)n	Simple_repeat	1	78	(0)	931798
19	28.1	0.0	2.8	chr12	104303658	104303729	(28971580)	+	(GGCCG)n	Simple_repeat	1	72	(0)	932309
23	28.5	1.3	0.0	chr12	106774607	106774682	(26500627)	+	GA-rich	Low_complexity	1	77	(0)	936818
2160	11.1	0.0	0.0	chr12	107225211	107225532	(26049777)	+	AluSc8	SINE/Alu	1	311	(0)	937667
704	15.4	0.0	0.0	chr12	107225533	107225636	(26049673)	+	AluJr	SINE/Alu	134	237	(75)	937668
24	7.5	2.2	4.3	chr12	107225727	107225772	(26049537)	+	(GGA)n	Simple_repeat	1	47	(0)	937669
224	18.2	0.0	10.2	chr12	109736645	109736693	(23538616)	+	L2b	LINE/L2	3309	3352	(23)	943197
20	21.4	4.9	3.5	chr12	109911187	109911267	(23364042)	+	(AGCTGG)n	Simple_repeat	1	85	(0)	943624
1936	16.1	0.3	0.3	chr12	109911330	109911639	(23363670)	+	AluJb	SINE/Alu	1	310	(2)	943625
504	26.7	6.8	0.7	chr12	110614474	110614624	(22660685)	C	MIRb	SINE/MIR	(0)	268	108	945135
25	15.2	2.7	5.3	chr12	110689134	110689220	(22586089)	+	(CCCGCC)n	Simple_repeat	1	84	(0)	945290
13	17.8	5.3	0.0	chr12	111406139	111406176	(21869133)	+	(CGAG)n	Simple_repeat	1	40	(0)	947030
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
217	33.4	11.3	0.8	chr12	113065218	113065362	(20209947)	C	MIR1_Amn	SINE/MIR	(24)	206	49	950707
1803	16.9	1.0	1.0	chr12	113098732	113099033	(20176276)	+	AluJr	SINE/Alu	2	303	(9)	950789
275	26.2	1.4	19.0	chr12	113153532	113153605	(20121704)	C	MIRb	SINE/MIR	(6)	262	207	950920
15	11.1	7.3	2.3	chr12	113154486	113154526	(20120783)	+	(GAGCGC)n	Simple_repeat	1	44	(0)	950923
264	32.6	7.7	3.7	chr12	114272009	114272327	(19002982)	+	L2b	LINE/L2	3000	3347	(40)	953355
186	31.1	2.2	9.1	chr12	116381152	116381250	(16894059)	C	MIRc	SINE/MIR	(130)	138	47	957891
457	30.3	10.6	0.0	chr12	116687776	116687953	(16587356)	C	MIRb	SINE/MIR	(31)	237	39	958701
495	23.9	12.4	4.7	chr12	116910536	116910750	(16364559)	+	L2a	LINE/L2	3192	3425	(1)	959264
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
35	5.0	0.0	0.0	chr12	119156612	119156652	(14118657)	+	(CCGGAG)n	Simple_repeat	1	41	(0)	964111
48	5.5	0.0	0.0	chr12	119156703	119156759	(14118550)	+	(AGCCGG)n	Simple_repeat	1	57	(0)	964112
12	9.7	0.0	0.0	chr12	120087331	120087352	(13187957)	+	(GGCG)n	Simple_repeat	1	22	(0)	966206
11	25.8	0.0	7.8	chr12	120117232	120117295	(13158014)	+	(GGCCCC)n	Simple_repeat	1	64	(0)	966263
414	24.2	16.9	9.2	chr12	120437513	120437762	(12837547)	C	L2a	LINE/L2	(0)	3426	3154	967083
25	18.9	4.3	5.2	chr12	120469569	120469661	(12805648)	+	(CCG)n	Simple_repeat	1	97	(0)	967152
12	17.3	11.7	1.5	chr12	120999561	120999620	(12275689)	+	(CCAG)n	Simple_repeat	1	67	(0)	968338
296	23.5	13.4	0.0	chr12	121016663	121016787	(12258522)	C	MIR3	SINE/MIR	(23)	185	40	968381
13	12.7	0.0	0.0	chr12	121578636	121578661	(11696648)	+	(CCCAC)n	Simple_repeat	1	26	(0)	969715
215	29.9	1.5	4.3	chr12	121582613	121582682	(11692627)	C	MIR3	SINE/MIR	(19)	189	122	969725
35	0.0	2.8	0.0	chr12	121672749	121672784	(11602525)	+	(TTGTT)n	Simple_repeat	1	37	(0)	970010
1878	9.4	3.5	0.7	chr12	121672785	121673060	(11602249)	C	AluSz	SINE/Alu	(28)	284	1	970011
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
18	18.8	6.5	1.5	chr12	122500541	122500611	(10774698)	+	(CGCCCT)n	Simple_repeat	1	74	(0)	972003
14	12.5	0.0	0.0	chr12	122500719	122500744	(10774565)	+	(TCG)n	Simple_repeat	1	26	(0)	972004
1301	26.9	6.3	1.1	chr12	123900634	123901009	(9374300)	C	MLT1K	LTR/ERVL-MaLR	(21)	574	178	975160
703	22.5	6.3	0.0	chr12	124510440	124510617	(8764692)	C	MIR	SINE/MIR	(63)	199	10	976179
515	24.8	8.2	0.0	chr12	125280429	125280585	(7994724)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	241	977946
332	29.1	2.5	0.0	chr12	125280657	125280773	(7994536)	C	MLT1I	LTR/ERVL-MaLR	(277)	134	15	977946
377	29.8	11.1	0.6	chr12	130713922	130714090	(2561219)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	987098
1335	23.1	10.6	12.4	chr12	131218362	131218950	(2056359)	+	MER70B	LTR/ERVL	1	577	(1)	987868
12	14.8	4.9	4.7	chr12	131828275	131828315	(1446994)	+	(GGCGG)n	Simple_repeat	1	43	(0)	988657
13	18.7	2.2	4.3	chr12	131828410	131828455	(1446854)	+	(GCGGAGG)n	Simple_repeat	1	47	(0)	988658
1052	25.6	6.5	2.1	chr12	131854866	131855194	(1420115)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	30	988696
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
816	25.2	4.6	4.4	chr12	132445743	132446081	(829228)	+	LTR8	LTR/ERV1	1	425	(395)	989466
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
3375	12.6	9.4	0.3	chr12	132888542	132889023	(386286)	+	MER4D1	LTR/ERV1	1	533	(367)	990114
1521	15.4	8.8	2.1	chr12	132889024	132889308	(386001)	+	AluJb	SINE/Alu	1	306	(6)	990115
911	17.5	0.0	6.2	chr12	132956529	132956705	(318604)	C	AluJo	SINE/Alu	(10)	302	137	990230
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
16	15.3	2.0	6.0	chr13	20127770	20127818	(94236510)	+	(TGAGG)n	Simple_repeat	1	50	(0)	993808
338	37.8	5.4	2.2	chr13	20412858	20413125	(93951203)	C	L3	LINE/CR1	(2367)	1732	1456	994212
16	16.2	6.0	1.9	chr13	24680678	24680727	(89683601)	+	(GCGCTCC)n	Simple_repeat	1	53	(0)	1000636
14	15.0	10.9	1.6	chr13	26186524	26186578	(88177750)	+	(GCGCACA)n	Simple_repeat	1	61	(0)	1002856
2877	4.8	0.0	0.0	chr13	26186766	26187075	(88177253)	C	AluY	SINE/Alu	(0)	311	2	1002857
1387	11.8	15.7	0.4	chr13	26222671	26222908	(88141420)	C	AluJr	SINE/Alu	(27)	285	5	1002920
1735	21.1	13.1	1.7	chr13	27034425	27034883	(87329445)	C	MLT2B1	LTR/ERVL	(0)	520	2	1004208
168	20.2	2.4	0.5	chr13	28531565	28531941	(85832387)	+	(TG)n	Simple_repeat	1	386	(0)	1006902
426	31.7	11.0	1.6	chr13	28658712	28658900	(85705428)	+	MIRc	SINE/MIR	58	266	(2)	1007119
15	15.7	0.0	5.1	chr13	28659275	28659313	(85705015)	+	(CGG)n	Simple_repeat	1	39	(0)	1007120
16	26.0	0.0	1.9	chr13	28718808	28718859	(85645469)	+	(CGCGG)n	Simple_repeat	1	52	(0)	1007214
312	30.7	15.5	2.1	chr13	32019436	32019638	(82344690)	C	MIRb	SINE/MIR	(3)	265	30	1012170
2842	20.4	3.4	0.9	chr13	32019903	32020534	(82343794)	C	L1MB5	LINE/L1	(8)	6166	5519	1012171
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
17630	22.2	2.3	1.3	chr13	38043985	38047325	(76317003)	+	L1PA15	LINE/L1	11	4211	(3944)	1020779
11	23.8	8.5	0.0	chr13	43785834	43785892	(70578436)	+	(GTGGCC)n	Simple_repeat	1	64	(0)	1029331
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
208	0.0	0.0	0.0	chr13	44142133	44142311	(70222017)	+	(CTCGG)n	Simple_repeat	1	179	(0)	1029840
14	8.2	0.0	3.6	chr13	45418420	45418447	(68945881)	+	(GCCCC)n	Simple_repeat	1	28	(0)	1032247
13	19.7	0.0	6.5	chr13	49936438	49936483	(64427845)	+	G-rich	Low_complexity	1	46	(0)	1039354
21	21.6	3.8	3.6	chr13	50843398	50843479	(63520849)	+	(CGCCCG)n	Simple_repeat	1	82	(0)	1040728
30	11.8	8.0	1.2	chr13	51222279	51222353	(63141975)	+	(GGCGCG)n	Simple_repeat	1	81	(0)	1041254
2226	11.9	0.0	0.7	chr13	51243526	51243835	(63120493)	C	AluSq2	SINE/Alu	(5)	308	1	1041280
4217	12.8	7.7	0.4	chr13	51244953	51245627	(63118701)	C	LTR9A1	LTR/ERV1	(0)	728	1	1041282
229	22.1	0.8	3.2	chr13	52159787	52159872	(62204456)	+	MIRc	SINE/MIR	16	102	(166)	1042687
621	25.0	11.8	6.3	chr13	52159874	52160176	(62204152)	+	MLT1D	LTR/ERVL-MaLR	1	322	(183)	1042688
14	16.5	5.9	3.7	chr13	52406197	52406247	(61958081)	+	(GGCG)n	Simple_repeat	1	54	(0)	1043056
44	0.0	0.0	0.0	chr13	52455636	52455675	(61908653)	+	(GCGGTG)n	Simple_repeat	1	40	(0)	1043143
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
41	2.4	0.0	0.0	chr13	53201091	53201132	(61163196)	+	(CGC)n	Simple_repeat	1	42	(0)	1044310
881	11.4	0.0	1.5	chr13	55000873	55001005	(59363323)	+	MER41C	LTR/ERV1	1	131	(390)	1046610
1239	17.1	4.1	0.0	chr13	55000997	55001207	(59363121)	+	LTR1B1	LTR/ERV1	599	818	(0)	1046611
238	32.6	5.9	0.0	chr13	55001291	55001434	(59362894)	C	L1MC5a	LINE/L1	(2109)	668	516	1046612
1820	29.5	6.9	7.9	chr13	55576157	55578219	(58786109)	+	L1M2	LINE/L1	1	1756	(5453)	1047352
3697	4.0	0.0	0.2	chr13	55578228	55578676	(58785652)	C	LTR7	LTR/ERV1	(2)	448	1	1047353
20	22.4	2.1	0.0	chr13	57629636	57629682	(56734646)	+	(GT)n	Simple_repeat	1	48	(0)	1049816
342	28.9	0.7	9.2	chr13	59531409	59531572	(54832756)	+	MER5B	DNA/hAT-Charlie	29	178	(0)	1052239
200	32.8	1.5	10.1	chr13	59531598	59531746	(54832582)	C	L2b	LINE/L2	(222)	3153	3018	1052235
16	33.7	0.0	0.0	chr13	71865169	71865221	(42499107)	+	(CA)n	Simple_repeat	1	53	(0)	1068014
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
211	35.2	7.9	2.0	chr13	75548971	75549173	(38815155)	+	L2c	LINE/L2	3080	3295	(92)	1073543
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
51	0.0	0.0	0.0	chr13	77326241	77326284	(37038044)	+	(AC)n	Simple_repeat	1	44	(0)	1076030
15	13.9	0.0	0.0	chr13	77326375	77326398	(37037930)	+	(AC)n	Simple_repeat	1	24	(0)	1076031
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
865	31.5	2.3	2.3	chr13	81990456	81990799	(32373529)	+	BLACKJACK	DNA/hAT-Blackjack	149	492	(2477)	1082205
451	29.4	0.0	0.0	chr13	81990844	81990952	(32373376)	C	MST-int	LTR/ERVL-MaLR	(742)	909	801	1082206
358	28.5	9.6	3.1	chr13	84654689	84654897	(29709431)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	363	1085525
19	22.3	2.0	2.0	chr13	84654904	84654953	(29709375)	+	(TC)n	Simple_repeat	1	51	(0)	1085526
509	30.6	3.7	6.5	chr13	84654997	84655304	(29709024)	C	MLT1G3	LTR/ERVL-MaLR	(296)	299	1	1085525
13	13.1	0.0	0.0	chr13	87677539	87677563	(26686765)	+	(CGG)n	Simple_repeat	1	25	(0)	1089329
37	23.5	0.0	1.1	chr13	87677746	87677837	(26686491)	+	(CAG)n	Simple_repeat	1	92	(0)	1089330
586	25.2	13.8	0.3	chr13	94825374	94825565	(19538763)	C	MIR	SINE/MIR	(9)	253	31	1098980
787	20.6	1.9	0.0	chr13	98445717	98445876	(15918452)	C	MLT1C	LTR/ERVL-MaLR	(289)	178	16	1104670
330	32.1	14.6	2.3	chr13	98890842	98891099	(15473229)	C	L3	LINE/CR1	(2197)	1902	1608	1105364
307	36.0	15.2	2.0	chr13	98891186	98891528	(15472800)	C	L3	LINE/CR1	(2518)	1581	1186	1105364
504	35.3	2.8	4.7	chr13	99176170	99176529	(15187799)	+	MamGyp-int	LTR/Gypsy	4211	4563	(540)	1105836
307	27.0	5.8	1.2	chr13	99176766	99176930	(15187398)	+	MIR	SINE/MIR	14	186	(76)	1105837
32	22.2	1.8	4.5	chr13	99606510	99606661	(14757667)	+	G-rich	Low_complexity	1	147	(0)	1106537
14	21.8	6.8	3.8	chr13	99606673	99606758	(14757570)	+	(GGC)n	Simple_repeat	1	88	(0)	1106538
21	28.2	0.0	0.0	chr13	99659203	99659253	(14705075)	+	(TG)n	Simple_repeat	1	51	(0)	1106627
2388	9.0	0.0	0.0	chr13	99685680	99685978	(14678350)	+	AluSz	SINE/Alu	1	299	(13)	1106667
411	14.9	1.4	2.7	chr13	99703171	99703244	(14661084)	+	AluSz6	SINE/Alu	1	73	(239)	1106694
12	9.9	2.6	7.7	chr13	99972059	99972096	(14392232)	+	G-rich	Low_complexity	1	39	(0)	1107129
31	0.0	0.0	0.0	chr13	99982754	99982782	(14381546)	+	(CCA)n	Simple_repeat	1	29	(0)	1107143
20	13.6	0.0	2.4	chr13	102402590	102402631	(11961697)	+	(CCCCAG)n	Simple_repeat	1	42	(0)	1110732
16	10.7	0.0	3.1	chr13	102596926	102596957	(11767371)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1111016
1225	16.0	2.8	3.3	chr13	102845414	102845626	(11518702)	+	AluJr	SINE/Alu	85	296	(16)	1111373
1297	22.1	2.6	0.0	chr13	110797183	110797480	(3566848)	C	L1M5	LINE/L1	(400)	5773	5468	1121768
414	34.4	2.4	1.2	chr13	110797659	110797823	(3566505)	+	MamRep605	LTR?	555	721	(128)	1121769
237	21.0	13.8	4.7	chr13	110810798	110810882	(3553446)	C	L2b	LINE/L2	(0)	3375	3282	1121795
358	17.6	13.6	2.9	chr13	110811337	110811441	(3552887)	C	Tigger14a	DNA/TcMar-Tigger	(159)	165	48	1121796
13	17.6	0.0	2.9	chr13	110914896	110914929	(3449399)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1121925
475	27.8	6.4	1.0	chr13	112442192	112442296	(1922032)	C	MER58A	DNA/hAT-Charlie	(0)	224	117	1123499
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
27	3.4	0.0	0.0	chr13	112689836	112689865	(1674463)	+	(CCTCTGC)n	Simple_repeat	1	30	(0)	1123837
34	14.9	6.5	2.0	chr13	112689876	112689968	(1674360)	+	G-rich	Low_complexity	1	99	(0)	1123838
537	30.5	5.0	2.8	chr13	112736133	112736385	(1627943)	+	MIRb	SINE/MIR	6	264	(4)	1123884
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
12	24.0	1.6	6.5	chr13	113491013	113491073	(873255)	+	(GGCGG)n	Simple_repeat	1	62	(0)	1124764
264	17.3	0.0	0.0	chr13	113733563	113733614	(630714)	+	MER4-int	LTR/ERV1	1111	1162	(5436)	1124966
200	36.4	1.2	0.1	chr13	113750914	113751408	(612920)	+	(TG)n	Simple_repeat	1	501	(0)	1124991
350	31.2	5.5	0.0	chr13	114110338	114110491	(253837)	+	MER58B	DNA/hAT-Charlie	88	250	(91)	1125255
209	25.9	6.9	0.0	chr13	114110594	114110674	(253654)	+	MIRb	SINE/MIR	101	187	(81)	1125256
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
16	14.0	7.5	0.0	chr14	20343644	20343683	(86700035)	+	(GGC)n	Simple_repeat	1	43	(0)	1127888
29	33.2	0.0	3.6	chr14	20461318	20461457	(86582261)	+	(GCCGCC)n	Simple_repeat	1	140	(0)	1128082
1211	18.9	6.9	1.8	chr14	20578090	20578402	(86465316)	+	L1MEc	LINE/L1	6089	6419	(620)	1128283
505	22.6	4.6	2.7	chr14	20578415	20578564	(86465154)	C	LTR55	LTR/ERVL?	(101)	447	295	1128288
2159	10.0	2.4	4.9	chr14	20682388	20682735	(86360983)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1128458
6733	20.8	9.8	3.7	chr14	21191934	21193578	(85850140)	+	MER52A	LTR/ERV1	1	1755	(0)	1129252
12	20.6	0.0	11.4	chr14	21526387	21526456	(85517262)	+	G-rich	Low_complexity	1	70	(0)	1129926
260	19.7	2.7	7.8	chr14	21529042	21529118	(85514600)	C	LFSINE_Vert	SINE/tRNA	(0)	459	387	1129931
252	22.6	0.0	0.0	chr14	23548432	23548484	(83495234)	+	UCON85	Unknown	28	80	(0)	1133018
17	13.0	7.4	3.5	chr14	23551167	23551180	(83492538)	+	(CCGTC)n	Simple_repeat	1	32	(26)	1133020
13	18.2	0.0	0.0	chr14	23551181	23551211	(83492507)	+	(CCCCTC)n	Simple_repeat	1	31	(0)	1133021
17	13.0	7.4	3.5	chr14	23551212	23551220	(83492498)	+	(CCGTC)n	Simple_repeat	33	58	(0)	1133020
14	18.4	2.1	4.2	chr14	24141475	24141521	(82902197)	+	(GCCCCCG)n	Simple_repeat	1	48	(0)	1133811
13	17.4	0.0	2.9	chr14	24188317	24188350	(82855368)	+	(CCCCA)n	Simple_repeat	1	34	(0)	1133873
13	23.5	0.0	0.0	chr14	24316281	24316315	(82727403)	+	(CCG)n	Simple_repeat	1	35	(0)	1134063
12	20.4	0.0	6.7	chr14	24442282	24442326	(82601392)	+	(GCCCC)n	Simple_repeat	1	45	(0)	1134266
210	32.8	7.4	2.6	chr14	26088164	26088279	(80955439)	C	L2c	LINE/L2	(31)	3356	3235	1136340
18	16.3	0.0	0.0	chr14	30622341	30622376	(76421342)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	1142089
999	11.5	0.0	3.6	chr14	31286694	31286746	(75756972)	C	AluSz6	SINE/Alu	(178)	134	85	1143329
5519	15.6	11.1	0.0	chr14	31286747	31287613	(75756105)	C	LTR1D	LTR/ERV1	(0)	975	1	1143330
406	32.2	4.3	3.4	chr14	31561070	31561275	(75482443)	+	MIRc	SINE/MIR	44	251	(17)	1143879
5154	11.1	5.0	3.4	chr14	34693173	34693995	(72349723)	+	LTR1A2	LTR/ERV1	1	837	(0)	1148450
15	19.5	0.0	0.0	chr14	34714549	34714583	(72329135)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1148493
11	20.5	5.1	0.0	chr14	34982680	34982718	(72061000)	+	(TCAGCTC)n	Simple_repeat	1	41	(0)	1149088
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
13	8.5	0.0	3.7	chr14	35826847	35826873	(71216845)	+	(CGGGG)n	Simple_repeat	1	27	(0)	1150696
2305	7.9	1.0	0.0	chr14	39174459	39174749	(67868969)	+	AluSx	SINE/Alu	1	294	(18)	1155291
2827	1.0	0.0	0.0	chr14	49586580	49586879	(57456839)	+	7SLRNA	srpRNA	1	300	(20)	1168209
13	29.7	1.5	3.0	chr14	49688218	49688282	(57355436)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1168416
684	19.6	18.1	8.6	chr14	49692523	49692907	(57350811)	+	L1MC5a	LINE/L1	2049	2478	(299)	1168427
2870	0.3	0.0	0.0	chr14	49862550	49862849	(57180869)	C	7SLRNA	srpRNA	(20)	300	1	1168780
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
19608	15.2	4.5	4.5	chr14	50687188	50689444	(56354274)	C	L1M1	LINE/L1	(5211)	2354	8	1170349
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
14	9.3	5.3	5.0	chr14	53432498	53432535	(53611183)	+	(TGG)n	Simple_repeat	1	40	(0)	1174515
39	22.3	3.6	4.2	chr14	53956783	53956921	(53086797)	+	(CTCC)n	Simple_repeat	1	144	(0)	1175257
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
229	26.0	19.3	2.9	chr14	54773829	54773979	(52269739)	C	L2a	LINE/L2	(1)	3425	3220	1176431
670	24.9	11.5	7.3	chr14	56847187	56847502	(50196216)	+	MamRep605	LTR?	1	331	(518)	1179826
13	31.1	1.2	4.8	chr14	57390736	57390817	(49652901)	+	G-rich	Low_complexity	1	83	(0)	1180687
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
35	21.3	5.3	3.6	chr14	60249116	60249248	(46794470)	+	(GCG)n	Simple_repeat	1	140	(0)	1184789
16	22.3	0.0	2.3	chr14	61321681	61321724	(45721994)	+	GA-rich	Low_complexity	1	44	(0)	1186349
234	40.6	0.7	1.4	chr14	61609436	61609575	(45434143)	C	MamSINE1	SINE/tRNA-RTE	(34)	256	118	1186763
1785	20.0	22.0	6.5	chr14	61609817	61610448	(45433270)	+	Zaphod3	DNA/hAT-Tip100	1	758	(1865)	1186764
22	6.7	0.0	0.0	chr14	64503857	64503888	(42539830)	+	(GTGC)n	Simple_repeat	1	32	(0)	1191408
13	9.3	0.0	0.0	chr14	64503883	64503905	(42539813)	+	(GCCC)n	Simple_repeat	1	23	(0)	1191409
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
2461	5.4	0.3	0.3	chr14	64539682	64539978	(42503740)	C	AluSc	SINE/Alu	(12)	297	1	1191465
3772	17.7	11.8	7.2	chr14	65469451	65470527	(41573191)	C	MER52D	LTR/ERV1	(0)	1755	471	1193239
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
933	14.2	1.9	0.7	chr14	67600452	67600606	(39443112)	+	AluJb	SINE/Alu	134	290	(22)	1196382
2268	9.4	0.3	0.7	chr14	68933129	68933435	(38110283)	C	AluSz	SINE/Alu	(6)	306	1	1198507
256	16.3	2.0	0.0	chr14	68933455	68933503	(38110215)	C	Charlie8	DNA/hAT-Charlie	(1997)	431	382	1198508
259	32.9	7.9	7.3	chr14	68933635	68933700	(38110018)	C	Charlie8	DNA/hAT-Charlie	(2239)	189	128	1198508
1861	15.2	3.3	2.0	chr14	68933701	68933997	(38109721)	+	AluJb	SINE/Alu	2	302	(10)	1198509
205	15.4	0.0	24.3	chr14	68980154	68980256	(38063462)	C	MIR3	SINE/MIR	(21)	187	110	1198600
234	31.5	2.7	0.0	chr14	69038041	69038113	(38005605)	+	MIR	SINE/MIR	187	261	(1)	1198759
14	11.7	3.6	0.0	chr14	69261211	69261238	(37782480)	+	(GCG)n	Simple_repeat	1	29	(0)	1199176
1778	13.2	1.9	1.0	chr14	69534919	69535224	(37508494)	C	L1MB2	LINE/L1	(69)	6102	5794	1199707
14	15.8	2.7	2.6	chr14	69712140	69712176	(37331542)	+	(CTG)n	Simple_repeat	1	38	(0)	1200058
966	26.3	0.8	3.7	chr14	70027588	70027832	(37015886)	+	MIRb	SINE/MIR	22	259	(9)	1200562
1986	21.7	13.1	1.0	chr14	70417283	70417906	(36625812)	C	MER67C	LTR/ERV1	(0)	711	1	1201181
266	34.2	6.6	5.9	chr14	70640716	70641138	(36402580)	+	L2c	LINE/L2	2937	3362	(25)	1201465
17	5.5	10.5	0.0	chr14	71932316	71932353	(35111365)	+	(GCCCAGGT)n	Simple_repeat	1	42	(0)	1203541
81	16.4	0.7	0.7	chr14	72600942	72601090	(34442628)	+	GA-rich	Low_complexity	1	150	(0)	1204525
12	8.8	4.2	0.0	chr14	73136550	73136573	(33907145)	+	(GCG)n	Simple_repeat	1	25	(0)	1205593
12	19.7	0.0	0.0	chr14	73136699	73136727	(33906991)	+	G-rich	Low_complexity	1	29	(0)	1205594
762	5.9	2.9	0.0	chr14	73569991	73570091	(33473627)	C	BC200	scRNA	(95)	105	2	1206584
16	20.9	0.0	0.0	chr14	73719223	73719255	(33324463)	+	(C)n	Simple_repeat	1	33	(0)	1206933
17	25.8	3.0	1.5	chr14	74946695	74946760	(32096958)	+	(TTCT)n	Simple_repeat	1	68	(0)	1209452
194	32.5	5.4	3.9	chr14	76314687	76314814	(30728904)	C	MIR3	SINE/MIR	(72)	136	7	1211972
335	29.6	8.2	3.0	chr14	76761013	76761200	(30282518)	C	MIR3	SINE/MIR	(15)	193	4	1212904
19	20.6	4.2	4.0	chr14	76761491	76761562	(30282156)	+	(GGC)n	Simple_repeat	1	75	(0)	1212905
12	12.0	0.0	6.5	chr14	76812884	76812914	(30230804)	+	(GCCCG)n	Simple_repeat	1	31	(0)	1212987
363	31.4	5.9	0.6	chr14	76863962	76864121	(30179597)	C	LTR67B	LTR/ERVL	(451)	169	1	1213088
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
12	22.2	6.4	0.0	chr14	76956643	76956689	(30087029)	+	(GCCGGCC)n	Simple_repeat	1	50	(0)	1213291
11	18.9	5.8	6.8	chr14	76962137	76962144	(30081574)	+	(CTCACT)n	Simple_repeat	1	70	(0)	1213304
15	17.0	5.2	4.9	chr14	76962145	76962202	(30081516)	+	(TCACTT)n	Simple_repeat	1	61	(0)	1213305
425	16.7	0.0	0.0	chr14	76968916	76968981	(30074737)	C	AluSq10	SINE/Alu	(247)	66	1	1213319
13	23.9	0.0	0.0	chr14	77026836	77026870	(30016848)	+	(CGA)n	Simple_repeat	1	35	(0)	1213463
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
12	10.0	0.0	0.0	chr14	77034279	77034300	(30009418)	+	(GGAG)n	Simple_repeat	1	22	(0)	1213477
20	22.9	3.9	6.5	chr14	77098386	77098489	(29945229)	+	GA-rich	Low_complexity	1	108	(0)	1213611
286	27.7	1.0	4.7	chr14	77124547	77124652	(29919066)	+	MIRb	SINE/MIR	80	181	(87)	1213652
1385	24.1	11.3	8.3	chr14	77208108	77208682	(29835036)	C	LTR67B	LTR/ERVL	(20)	600	7	1213827
303	28.1	1.2	0.0	chr14	77208698	77208779	(29834939)	+	MIR	SINE/MIR	180	262	(0)	1213826
16	24.0	0.0	5.1	chr14	77616376	77616434	(29427284)	+	(CCCCG)n	Simple_repeat	1	59	(0)	1214574
18	9.4	2.9	0.0	chr14	77616453	77616486	(29427232)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1214575
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
24	30.4	0.0	0.0	chr14	81435659	81435722	(25607996)	+	(AC)n	Simple_repeat	1	64	(0)	1220622
29	0.0	0.0	3.1	chr14	81436222	81436253	(25607465)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	1220623
232	30.1	7.6	2.7	chr14	82075653	82075727	(24967991)	C	MER91A	DNA/hAT-Tip100	(0)	196	118	1221608
15	34.0	1.1	3.2	chr14	88562934	88563026	(18480692)	+	G-rich	Low_complexity	1	94	(0)	1230629
351	22.9	1.9	6.2	chr14	88977785	88977896	(18065822)	+	MamRep564	Unknown	143	249	(108)	1231306
366	32.0	12.0	1.7	chr14	88978045	88978216	(18065502)	+	MER91A	DNA/hAT-Tip100	5	196	(0)	1231307
2025	19.3	4.8	3.9	chr14	89293310	89293741	(17749977)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	30	1231809
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
745	27.8	10.1	0.8	chr14	90510008	90510250	(16533468)	+	MIRb	SINE/MIR	1	268	(0)	1234064
706	27.9	13.3	7.1	chr14	90519144	90519667	(16524051)	+	MLT1L	LTR/ERVL-MaLR	37	598	(12)	1234083
18	28.3	1.0	5.9	chr14	91510623	91510722	(15532996)	+	(CGGCCC)n	Simple_repeat	1	101	(0)	1235829
308	39.2	9.5	6.3	chr14	91830736	91831132	(15212586)	C	L1MEd	LINE/L1	(6529)	1434	1024	1236366
20	27.5	0.0	3.0	chr14	92748493	92748559	(14295159)	+	(GGC)n	Simple_repeat	1	67	(0)	1238154
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
306	30.6	5.4	5.8	chr14	96364242	96364446	(10679272)	+	MIR	SINE/MIR	29	232	(30)	1244739
13	17.5	0.0	2.9	chr14	96502911	96502944	(10540774)	+	A-rich	Low_complexity	1	34	(0)	1245032
16	23.8	1.7	3.4	chr14	97033427	97033484	(10010234)	+	(CGCTCC)n	Simple_repeat	1	59	(0)	1245951
428	25.9	4.7	2.0	chr14	98651290	98651435	(8392283)	C	MIRb	SINE/MIR	(38)	230	81	1248725
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
295	28.4	7.5	3.9	chr14	99628777	99628904	(7414814)	+	MIRc	SINE/MIR	85	217	(51)	1250311
20	25.4	2.7	6.2	chr14	99971306	99971415	(7072303)	+	(CCGCCC)n	Simple_repeat	1	113	(0)	1250931
264	28.9	7.5	0.0	chr14	100214710	100214844	(6828874)	C	MIR3	SINE/MIR	(52)	156	11	1251448
366	32.6	13.3	0.9	chr14	100486864	100487080	(6556638)	C	L1ME4a	LINE/L1	(7)	6117	5870	1251940
275	23.9	4.3	0.0	chr14	101476291	101476378	(5567340)	C	MIRc	SINE/MIR	(127)	141	50	1253191
338	33.2	4.3	3.5	chr14	101476773	101477003	(5566715)	+	L2a	LINE/L2	3191	3423	(3)	1253193
13	18.9	0.0	0.0	chr14	101477120	101477149	(5566569)	+	(GGCAG)n	Simple_repeat	1	30	(0)	1253194
14	14.9	5.4	0.0	chr14	102086933	102086969	(4956749)	+	(CCCCAGT)n	Simple_repeat	1	39	(0)	1254193
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
16	0.0	0.0	0.0	chr14	102317173	102317189	(4726529)	+	(T)n	Simple_repeat	1	17	(0)	1254659
22	22.7	0.0	1.7	chr14	102319768	102319825	(4723893)	+	(GGC)n	Simple_repeat	1	58	(0)	1254667
11	25.5	0.0	6.9	chr14	102592248	102592305	(4451413)	+	G-rich	Low_complexity	1	58	(0)	1255258
14	13.0	9.5	0.0	chr14	102592422	102592463	(4451255)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1255259
293	29.3	3.3	0.8	chr14	102760697	102760833	(4282885)	C	MLT1H	LTR/ERVL-MaLR	(375)	174	39	1255626
661	29.2	13.1	1.3	chr14	102760866	102761240	(4282478)	+	LTR16A1	LTR/ERVL	20	445	(11)	1255627
17	19.8	8.4	1.3	chr14	102776817	102776887	(4266831)	+	(TGCGTG)n	Simple_repeat	1	77	(0)	1255667
30	5.6	0.0	0.0	chr14	102928683	102928720	(4114998)	+	(GCGTG)n	Simple_repeat	1	38	(0)	1255915
14	20.3	2.0	4.0	chr14	103139114	103139162	(3904556)	+	G-rich	Low_complexity	1	50	(0)	1256256
14	18.8	3.2	4.2	chr14	103334689	103334755	(3708963)	+	G-rich	Low_complexity	1	66	(0)	1256589
12	11.2	3.2	3.1	chr14	103522181	103522211	(3521507)	+	G-rich	Low_complexity	1	32	(0)	1256989
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
1823	13.4	4.0	0.3	chr14	103910607	103910897	(3132821)	C	AluJo	SINE/Alu	(10)	302	1	1257772
23	19.6	2.7	3.9	chr14	104604465	104604543	(2439175)	+	(GCGGCAG)n	Simple_repeat	1	78	(0)	1258579
13	19.9	4.9	0.0	chr14	104650405	104650445	(2393273)	+	(CCACTCC)n	Simple_repeat	1	43	(0)	1258648
19	15.6	4.8	4.5	chr14	104650446	104650463	(2393255)	+	(CCCTCC)n	Simple_repeat	5	66	(0)	1258649
17	15.1	4.3	2.1	chr14	104827819	104827864	(2215854)	+	G-rich	Low_complexity	1	48	(0)	1258878
13	18.2	6.6	4.6	chr14	105093885	105093945	(1949773)	+	G-rich	Low_complexity	1	65	(0)	1259236
12	20.1	4.7	6.0	chr14	105094007	105094070	(1949648)	+	(CGGAGC)n	Simple_repeat	1	67	(0)	1259237
17	15.2	0.0	7.8	chr14	105167789	105167839	(1875879)	+	(GGCCCG)n	Simple_repeat	1	51	(0)	1259347
13	25.9	0.0	6.5	chr14	105196508	105196569	(1847149)	+	(CCCGCC)n	Simple_repeat	1	62	(0)	1259377
12	11.5	4.7	6.7	chr14	105196540	105196582	(1847136)	+	(CCGAGCC)n	Simple_repeat	1	45	(0)	1259378
337	20.8	0.0	0.0	chr15	26082234	26082305	(75908884)	C	tRNA-Glu-GAG_	tRNA	(3)	72	1	1270993
196	32.3	1.6	0.0	chr15	26719174	26719235	(75271954)	+	MIRb	SINE/MIR	201	263	(5)	1271804
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
85	23.3	2.4	5.0	chr15	31077702	31077996	(70913193)	+	(GT)n	Simple_repeat	1	302	(0)	1278056
17	23.5	1.5	4.5	chr15	31391955	31392019	(70599170)	+	(GCCGG)n	Simple_repeat	1	66	(0)	1278530
12	25.4	4.3	0.0	chr15	31392151	31392197	(70598992)	+	(CCACTGC)n	Simple_repeat	1	49	(0)	1278531
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
12	20.8	0.0	2.9	chr15	38252257	38252291	(63738898)	+	(GGC)n	Simple_repeat	1	35	(0)	1288014
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
538	27.1	13.7	0.5	chr15	40807895	40808104	(61183085)	+	MIRc	SINE/MIR	4	240	(28)	1291969
11	23.2	1.6	7.7	chr15	40925943	40926006	(61065183)	+	(CCAGGCC)n	Simple_repeat	1	65	(0)	1292209
14	20.2	0.0	0.0	chr15	41774508	41774541	(60216648)	+	(CTGCCG)n	Simple_repeat	1	34	(0)	1294072
19	15.8	0.0	4.3	chr15	41882218	41882263	(60108926)	+	(CCCCG)n	Simple_repeat	1	46	(0)	1294184
19	31.9	3.8	0.9	chr15	43746158	43746263	(58244926)	+	(CCCAGC)n	Simple_repeat	1	110	(0)	1297538
15	30.2	0.0	6.6	chr15	43746221	43746311	(58244878)	+	(CCCCGC)n	Simple_repeat	1	91	(0)	1297539
22	11.5	0.0	0.0	chr15	48190842	48190879	(53800310)	+	(TTTGC)n	Simple_repeat	1	38	(0)	1304477
15	6.7	2.9	5.6	chr15	50686809	50686843	(51304346)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1308295
1922	16.5	5.2	8.8	chr15	51077572	51078015	(50913174)	+	MER61B	LTR/ERV1	1	427	(0)	1309009
298	32.8	0.0	0.0	chr15	52180117	52180244	(49810945)	C	MIRb	SINE/MIR	(99)	169	42	1310869
14	23.8	2.8	5.5	chr15	52295645	52295715	(49695474)	+	G-rich	Low_complexity	1	73	(0)	1311056
3502	23.1	10.3	2.5	chr15	52466815	52467944	(49523245)	+	L1M2	LINE/L1	1081	2515	(4334)	1311332
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
12	19.9	0.0	8.3	chr15	58771059	58771106	(43220083)	+	(GCCC)n	Simple_repeat	1	48	(0)	1320768
23	13.3	3.9	1.9	chr15	59689362	59689412	(42301777)	+	(GGC)n	Simple_repeat	1	53	(0)	1322574
25010	5.0	0.2	0.1	chr15	59803403	59809494	(42181695)	+	L1PA4	LINE/L1	52	6154	(1)	1322780
14	4.5	0.0	4.0	chr15	59997380	59997404	(41993785)	+	(CTTT)n	Simple_repeat	1	25	(0)	1323095
33	17.9	0.0	0.0	chr15	59997468	59997526	(41993663)	+	GA-rich	Low_complexity	1	59	(0)	1323096
16	25.4	1.7	3.3	chr15	60004161	60004220	(41986969)	+	(CCT)n	Simple_repeat	1	61	(0)	1323102
470	25.8	13.5	0.6	chr15	60805426	60805637	(41185552)	+	MIR	SINE/MIR	17	256	(6)	1324345
251	28.5	13.3	0.0	chr15	61085277	61085413	(40905776)	+	MIR3	SINE/MIR	3	160	(48)	1324778
840	22.2	2.1	0.5	chr15	61085435	61085620	(40905569)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1324779
16	9.9	0.0	5.6	chr15	62390426	62390476	(39600713)	+	(GCCGC)n	Simple_repeat	1	48	(0)	1326828
14	22.0	2.0	3.9	chr15	62390511	62390561	(39600628)	+	(CGCGCT)n	Simple_repeat	1	52	(0)	1326829
17	23.3	0.0	0.0	chr15	62390560	62390604	(39600585)	+	(CGGCGG)n	Simple_repeat	1	45	(0)	1326830
1471	15.3	3.1	11.5	chr15	63088946	63089266	(38901923)	C	AluJo	SINE/Alu	(8)	304	12	1327927
245	33.0	8.0	2.5	chr15	63089288	63089405	(38901784)	+	L3	LINE/CR1	3901	4025	(74)	1327928
223	36.3	6.8	3.1	chr15	63381323	63381450	(38609739)	+	Tigger19a	DNA/TcMar-Tigger	60	192	(131)	1328438
14	16.8	4.7	2.2	chr15	63870827	63870869	(38120320)	+	(CTCAGAG)n	Simple_repeat	1	45	(0)	1329297
348	25.9	13.5	2.5	chr15	63870875	63871033	(38120156)	C	MIRc	SINE/MIR	(25)	183	6	1329298
11	20.5	5.1	0.0	chr15	64152351	64152389	(37838800)	+	(GGCCCA)n	Simple_repeat	1	41	(0)	1329861
16	17.0	3.4	4.9	chr15	64460651	64460687	(37530502)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1330440
28	3.3	0.0	0.0	chr15	64460688	64460718	(37530471)	+	(GAGCCG)n	Simple_repeat	1	31	(0)	1330441
16	17.0	3.4	4.9	chr15	64460719	64460739	(37530450)	+	(GGCGG)n	Simple_repeat	5	27	(0)	1330442
204	29.0	6.1	5.1	chr15	64700201	64700298	(37290891)	C	MIR3	SINE/MIR	(25)	183	85	1330984
289	23.6	7.2	3.8	chr15	64825290	64825429	(37165760)	C	MIRc	SINE/MIR	(101)	167	9	1331287
13	16.6	2.2	6.4	chr15	64841566	64841611	(37149578)	+	(CGCCC)n	Simple_repeat	1	47	(0)	1331337
35	23.0	0.0	5.9	chr15	64841761	64841881	(37149308)	+	(CCCCGC)n	Simple_repeat	1	113	(0)	1331338
234	31.2	6.6	3.8	chr15	64842199	64842378	(37148811)	C	MIRb	SINE/MIR	(39)	229	39	1331339
562	26.9	5.7	1.9	chr15	64912223	64912434	(37078755)	C	MIR	SINE/MIR	(2)	260	46	1331493
196	31.2	17.0	0.0	chr15	64916058	64916150	(37075039)	C	MIRb	SINE/MIR	(131)	137	26	1331501
17	4.3	0.0	0.0	chr15	64990092	64990115	(37001074)	+	(AGG)n	Simple_repeat	1	24	(0)	1331656
928	29.9	11.8	0.9	chr15	65085036	65085473	(36905716)	+	LTR33	LTR/ERVL	15	506	(9)	1331854
189	32.7	0.0	0.0	chr15	65287160	65287214	(36703975)	+	OldhAT1	DNA/hAT-Ac	2019	2073	(775)	1332297
352	25.8	3.0	0.0	chr15	65287338	65287434	(36703755)	C	MIRb	SINE/MIR	(118)	150	51	1332298
223	20.0	9.1	0.0	chr15	65952713	65952772	(36038417)	C	MIRc	SINE/MIR	(92)	170	105	1333685
1360	21.6	6.2	3.3	chr15	66042533	66042983	(35948206)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	1333885
656	28.4	10.8	2.6	chr15	66067923	66068150	(35923039)	+	MIR	SINE/MIR	14	262	(0)	1333925
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
242	34.2	6.9	1.5	chr15	67030345	67030549	(34960640)	+	MamRep434	DNA/TcMar-Tigger	181	397	(29)	1335927
35	5.3	0.0	0.0	chr15	67030623	67030661	(34960528)	+	(TG)n	Simple_repeat	1	39	(0)	1335928
400	27.1	17.9	1.5	chr15	67030741	67030875	(34960314)	C	MIRb	SINE/MIR	(71)	197	36	1335929
1995	24.0	15.6	2.4	chr15	67032412	67033120	(34958069)	+	L2a	LINE/L2	2561	3421	(5)	1335932
231	29.4	5.2	3.2	chr15	67033119	67033213	(34957976)	C	MIR	SINE/MIR	(157)	105	9	1335935
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
281	31.0	5.0	2.8	chr15	68256802	68256977	(33734212)	+	MER45C	DNA/hAT-Tip100	261	440	(513)	1338010
1222	22.2	11.3	0.6	chr15	68559886	68560225	(33430964)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	42	1338559
22	6.4	9.8	1.8	chr15	68560231	68560281	(33430908)	+	(TTTC)n	Simple_repeat	1	56	(0)	1338560
2161	13.9	0.0	1.3	chr15	68560283	68560598	(33430591)	C	AluJr	SINE/Alu	(0)	312	1	1338561
203	32.8	13.4	5.7	chr15	69649024	69649146	(32342043)	+	MamTip2	DNA/hAT-Tip100	29	162	(143)	1340643
252	26.1	14.0	6.7	chr15	69820733	69820851	(32170338)	C	MIRb	SINE/MIR	(25)	243	115	1340964
2130	10.8	0.0	3.7	chr15	71203373	71203669	(30787520)	+	AluSz	SINE/Alu	1	286	(26)	1343351
197	32.4	3.0	7.1	chr15	71203670	71203735	(30787454)	C	L2c	LINE/L2	(630)	2789	2732	1343350
193	33.9	0.0	0.0	chr15	71203761	71203822	(30787367)	C	L2b	LINE/L2	(2)	3373	3312	1343352
22	25.6	2.2	4.3	chr15	72197777	72197867	(29793322)	+	(CGCC)n	Simple_repeat	1	93	(0)	1345070
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
14	23.4	3.0	5.8	chr15	73052019	73052085	(28939104)	+	GA-rich	Low_complexity	1	69	(0)	1346523
2361	10.1	0.3	0.0	chr15	73964430	73964737	(28026452)	C	AluSx	SINE/Alu	(3)	309	1	1348009
2726	23.3	6.1	2.1	chr15	73964738	73964776	(28026413)	C	L1MCc	LINE/L1	(3886)	3055	3020	1348007
275	33.9	8.4	0.0	chr15	73964793	73964901	(28026288)	C	L1MCc	LINE/L1	(5356)	1067	949	1348007
351	22.5	7.3	2.2	chr15	73965004	73965094	(28026095)	C	L1MCc	LINE/L1	(5508)	915	820	1348007
396	26.6	5.2	4.5	chr15	73965308	73965441	(28025748)	C	L1MCc	LINE/L1	(5932)	491	357	1348007
200	29.5	0.0	16.7	chr15	74204564	74204650	(27786539)	C	L3	LINE/CR1	(127)	3972	3900	1348439
2327	11.5	0.0	0.6	chr15	74204651	74204964	(27786225)	+	AluSx	SINE/Alu	1	312	(0)	1348440
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
230	28.8	5.1	1.8	chr15	74302849	74302961	(27688228)	+	MIR3	SINE/MIR	60	176	(32)	1348615
20	18.4	2.0	1.9	chr15	74615919	74615969	(27375220)	+	(GCG)n	Simple_repeat	1	52	(0)	1349184
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
184	33.3	0.0	6.0	chr15	74890362	74890428	(27100761)	C	L2	LINE/L2	(3334)	85	23	1349710
2203	13.1	0.0	1.0	chr15	75204465	75204809	(26786380)	C	AluSz	SINE/Alu	(0)	312	1	1350398
209	25.0	3.7	0.0	chr15	75205082	75205133	(26786056)	+	MIRc	SINE/MIR	26	79	(189)	1350399
1748	15.2	4.4	0.0	chr15	75903475	75903756	(26087433)	+	AluJb	SINE/Alu	2	296	(16)	1351719
18	23.9	3.7	4.7	chr15	77541896	77541977	(24449212)	+	(TCC)n	Simple_repeat	1	85	(0)	1354237
344	33.2	1.7	0.9	chr15	77702489	77702622	(24288567)	C	MIRb	SINE/MIR	(18)	250	116	1354500
13	17.8	0.0	5.4	chr15	77739238	77739274	(24251915)	+	(TTCCC)n	Simple_repeat	1	37	(0)	1354571
12	13.2	5.7	2.7	chr15	77864746	77864780	(24126409)	+	(GGCAG)n	Simple_repeat	1	37	(0)	1354810
17	20.9	2.1	2.1	chr15	78340382	78340428	(23650761)	+	(CCG)n	Simple_repeat	1	48	(0)	1355680
424	25.4	3.3	0.0	chr15	78825553	78825670	(23165519)	+	L1M5	LINE/L1	5355	5476	(648)	1356666
245	25.8	4.0	3.0	chr15	78825690	78825789	(23165400)	C	HAL1	LINE/L1	(0)	2507	2407	1356667
44	2.4	0.0	0.0	chr15	78825792	78825833	(23165356)	+	(AC)n	Simple_repeat	1	42	(0)	1356668
213	25.0	13.1	2.0	chr15	82648182	82648283	(19342906)	+	MIR3	SINE/MIR	33	147	(61)	1363214
17	17.6	1.7	6.7	chr15	82709459	82709517	(19281672)	+	G-rich	Low_complexity	1	60	(0)	1363302
275	28.4	4.1	0.0	chr15	84601379	84601494	(17389695)	C	MIR3	SINE/MIR	(29)	179	59	1366244
476	27.7	8.6	4.9	chr15	84653768	84653991	(17337198)	+	MIRb	SINE/MIR	8	240	(28)	1366350
233	22.9	1.6	0.0	chr15	84980664	84980724	(17010465)	C	MIR3	SINE/MIR	(77)	131	70	1367055
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
12688	19.0	5.1	3.9	chr15	86102339	86105200	(15885989)	C	L1MA4A	LINE/L1	(4143)	3423	358	1368936
273	27.7	5.7	7.7	chr15	88894159	88894313	(13096876)	C	MIR3	SINE/MIR	(98)	170	19	1373211
461	10.2	0.0	0.0	chr15	88998887	88998945	(12992244)	C	LTR62	LTR/ERVL	(0)	709	651	1373420
1868	10.6	8.4	0.0	chr15	88998946	88999032	(12992157)	C	MER4C	LTR/ERV1	(0)	465	354	1373421
3230	16.9	7.0	4.5	chr15	88999033	88999740	(12991449)	C	LTR8A	LTR/ERV1	(0)	727	1	1373422
2250	12.1	10.8	7.6	chr15	89003721	89003868	(12987321)	C	MER4C	LTR/ERV1	(331)	134	1	1373433
700	26.6	8.5	3.5	chr15	89003869	89004060	(12987129)	+	MLT1I	LTR/ERVL-MaLR	174	372	(39)	1373432
306	22.2	16.8	0.0	chr15	89004065	89004163	(12987026)	+	MLT2C1	LTR/ERVL	396	514	(49)	1373435
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
20	5.4	4.7	4.4	chr15	89999907	89999953	(11991236)	+	(GGAAG)n	Simple_repeat	1	47	(0)	1375383
442	23.6	17.6	0.7	chr15	92305619	92305759	(9685430)	+	MER5B	DNA/hAT-Charlie	8	177	(1)	1379641
571	32.4	2.7	0.0	chr15	92305883	92306064	(9685125)	+	Charlie19a	DNA/hAT-Charlie	4	190	(196)	1379642
257	30.0	16.5	5.4	chr15	92636997	92637366	(9353823)	+	MLT1K	LTR/ERVL-MaLR	24	442	(153)	1380142
8593	6.5	18.9	0.3	chr15	92710300	92711583	(9279606)	C	LTR12C	LTR/ERV1	(0)	1579	2	1380272
310	33.6	2.4	4.3	chr15	92711584	92711647	(9279542)	C	MIRb	SINE/MIR	(198)	70	8	1380271
365	25.6	2.4	2.4	chr15	93477193	93477316	(8513873)	C	L2b	LINE/L2	(1)	3374	3251	1381713
484	25.4	5.3	3.9	chr15	93479287	93479476	(8511713)	C	L2a	LINE/L2	(48)	3378	3207	1381715
13	23.5	0.0	0.0	chr15	98548717	98548751	(3442438)	+	G-rich	Low_complexity	1	35	(0)	1388808
336	22.7	3.9	12.4	chr15	99100909	99101134	(2890055)	C	Charlie26a	DNA/hAT-Charlie	(6)	319	114	1389625
13	15.4	5.6	0.0	chr15	99105697	99105732	(2885457)	+	(CCGCCG)n	Simple_repeat	1	38	(0)	1389634
735	24.7	12.0	5.4	chr15	99416211	99416527	(2574662)	C	MLT1F2	LTR/ERVL-MaLR	(127)	433	93	1390091
12	16.3	7.0	2.2	chr15	100973625	100973667	(1017522)	+	G-rich	Low_complexity	1	46	(0)	1392173
335	29.4	6.8	0.0	chr15	101015667	101015775	(975414)	C	MIR	SINE/MIR	(29)	233	117	1392231
543	25.8	7.0	0.0	chr15	101015795	101015953	(975236)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	204	1392232
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
26	0.0	0.0	0.0	chr15	101724604	101724628	(266561)	+	(GGGGC)n	Simple_repeat	1	25	(0)	1393181
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
13	17.6	4.0	5.8	chr16	275600	275649	(90062696)	+	(GCG)n	Simple_repeat	1	52	(0)	1394509
17	16.9	0.0	4.5	chr16	275632	275675	(90062670)	+	(GGCCG)n	Simple_repeat	1	44	(0)	1394510
348	30.0	10.8	2.8	chr16	383571	383824	(89954521)	+	L1ME4b	LINE/L1	572	848	(44)	1394654
12	18.3	5.4	0.0	chr16	384109	384145	(89954200)	+	(GCACCCA)n	Simple_repeat	1	39	(0)	1394655
19	22.0	3.7	4.8	chr16	638569	638649	(89699696)	+	G-rich	Low_complexity	1	84	(0)	1395038
15	18.9	2.3	2.2	chr16	668148	668191	(89670154)	+	(GGTCCG)n	Simple_repeat	1	45	(0)	1395064
13	28.1	0.0	4.9	chr16	668250	668310	(89670035)	+	G-rich	Low_complexity	1	61	(0)	1395065
11	13.2	5.7	2.7	chr16	668711	668745	(89669600)	+	(GCGCGG)n	Simple_repeat	1	37	(0)	1395066
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
16	18.9	0.0	0.0	chr16	1103027	1103062	(89235283)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1395499
2299	10.0	0.0	0.3	chr16	1303166	1303464	(89034881)	C	AluSx1	SINE/Alu	(14)	298	1	1395723
12	18.6	6.7	2.1	chr16	1474877	1474921	(88863424)	+	(CCG)n	Simple_repeat	1	48	(0)	1395967
35	23.7	3.6	3.5	chr16	1763788	1763924	(88574421)	+	G-rich	Low_complexity	1	142	(0)	1396368
17	13.7	0.0	0.0	chr16	1773265	1773296	(88565049)	+	(GCCGGG)n	Simple_repeat	1	32	(0)	1396373
4838	8.3	0.4	11.7	chr16	1943652	1943800	(88394545)	+	LTR8	LTR/ERV1	1	145	(546)	1396686
12	15.9	6.5	4.1	chr16	1979375	1979420	(88358925)	+	(GCCCC)n	Simple_repeat	1	49	(0)	1396741
11	9.5	11.8	0.0	chr16	1992691	1992724	(88345621)	+	(GCGCACG)n	Simple_repeat	1	38	(0)	1396754
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
13	21.1	2.6	0.0	chr16	2514189	2514226	(87824119)	+	G-rich	Low_complexity	1	39	(0)	1397556
26	0.0	0.0	0.0	chr16	2520252	2520276	(87818069)	+	(GGGC)n	Simple_repeat	1	25	(0)	1397563
423	30.8	5.1	1.5	chr16	3018373	3018504	(87319841)	+	MIRc	SINE/MIR	20	156	(112)	1398337
15	21.8	0.0	8.7	chr16	3028141	3028215	(87310130)	+	(CGGCG)n	Simple_repeat	1	68	(0)	1398353
13	8.8	0.0	12.8	chr16	3028306	3028352	(87309993)	+	(CCCGC)n	Simple_repeat	1	47	(0)	1398354
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
18	3.8	3.7	0.0	chr16	3184218	3184244	(87154101)	+	(TGT)n	Simple_repeat	1	28	(0)	1398680
612	1.4	0.0	0.0	chr16	3191501	3191573	(87146772)	+	tRNA-Lys-AAG	tRNA	1	73	(3)	1398698
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
220	32.1	8.7	0.0	chr16	3500675	3500758	(86837587)	+	MIR	SINE/MIR	152	243	(19)	1399286
3108	19.9	2.2	4.4	chr16	3554605	3554947	(86783398)	+	L1MB5	LINE/L1	5478	5818	(356)	1399378
297	28.0	4.1	0.0	chr16	3716864	3716956	(86621389)	+	L2a	LINE/L2	3330	3426	(0)	1399695
273	29.6	4.6	0.0	chr16	3881294	3881385	(86456960)	C	MIR	SINE/MIR	(126)	142	47	1399968
14	22.7	0.0	2.3	chr16	4253899	4253941	(86084404)	+	G-rich	Low_complexity	1	43	(0)	1400765
21	6.7	0.0	2.9	chr16	4293973	4294006	(86044339)	+	(CAG)n	Simple_repeat	1	34	(0)	1400871
910	11.8	4.5	0.0	chr16	4358944	4359070	(85979275)	C	AluJo	SINE/Alu	(179)	133	1	1401010
1012	22.1	5.2	8.7	chr16	4359071	4359131	(85979214)	C	MER63B	DNA/hAT-Blackjack	(334)	102	51	1401009
16	10.5	3.2	0.0	chr16	4359161	4359209	(85979136)	+	(GGCCCA)n	Simple_repeat	1	50	(0)	1401011
13	21.9	2.3	2.2	chr16	4476448	4476491	(85861854)	+	(GACAGGC)n	Simple_repeat	1	45	(0)	1401226
15	16.9	0.0	2.9	chr16	4847517	4847551	(85490794)	+	(GCG)n	Simple_repeat	1	35	(0)	1402011
245	30.3	11.7	2.4	chr16	5036785	5037177	(85301168)	C	L2a	LINE/L2	(95)	3331	2841	1402431
1956	26.3	3.0	4.5	chr16	11296960	11297561	(79040784)	+	L1ME2	LINE/L1	5570	6162	(2)	1415342
13	22.7	0.0	0.0	chr16	11915898	11915929	(78422416)	+	(GCG)n	Simple_repeat	1	32	(0)	1416786
401	30.8	5.4	4.1	chr16	14070771	14070990	(76267355)	+	MIRb	SINE/MIR	15	237	(31)	1421470
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
291	31.3	9.3	3.9	chr16	14309753	14309955	(76028390)	+	MIRc	SINE/MIR	35	249	(19)	1421819
315	35.0	8.2	3.2	chr16	14630435	14630655	(75707690)	C	L2a	LINE/L2	(3)	3423	3191	1422532
187	30.8	1.1	4.2	chr16	15601536	15601630	(74736715)	+	L2c	LINE/L2	3034	3125	(262)	1424796
272	27.1	15.0	4.0	chr16	17166314	17166413	(73171932)	+	L2c	LINE/L2	3256	3380	(7)	1428456
197	34.6	0.0	4.9	chr16	17166423	17166504	(73171841)	+	L2b	LINE/L2	3275	3352	(23)	1428457
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
584	25.0	1.2	1.8	chr16	19068099	19068261	(71270084)	+	MER5A1	DNA/hAT-Charlie	1	162	(4)	1432610
11	24.1	0.0	0.0	chr16	20074560	20074593	(70263752)	+	(ACACGC)n	Simple_repeat	1	34	(0)	1435077
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
36	0.0	4.9	0.0	chr16	23027135	23027175	(67311170)	+	(TTTCTTTT)n	Simple_repeat	1	43	(0)	1441323
2466	17.8	3.0	3.6	chr16	24051117	24051593	(66286752)	C	MER74A	LTR/ERVL	(68)	490	17	1443767
342	28.6	8.3	2.2	chr16	24258370	24258505	(66079840)	+	MIR3	SINE/MIR	25	169	(39)	1444216
404	33.1	1.5	0.3	chr16	28277941	28278110	(62060235)	+	MIR	SINE/MIR	43	212	(56)	1453081
18	11.8	5.3	0.0	chr16	28278313	28278350	(62059995)	+	(CCACC)n	Simple_repeat	1	40	(0)	1453082
1087	16.7	0.0	1.1	chr16	28278351	28278524	(62059821)	C	AluJb	SINE/Alu	(21)	291	120	1453083
768	25.9	1.6	0.5	chr16	28298445	28298630	(62039715)	+	MIR	SINE/MIR	38	225	(37)	1453134
705	26.9	4.4	0.0	chr16	28303994	28304209	(62034136)	+	L1ME4b	LINE/L1	315	540	(352)	1453146
586	21.0	12.7	1.1	chr16	28304396	28304576	(62033769)	+	MIRb	SINE/MIR	20	225	(43)	1453147
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
20	16.1	5.3	1.7	chr16	29805896	29805952	(60532393)	+	(CTCGCG)n	Simple_repeat	1	60	(0)	1456607
13	23.5	0.0	0.0	chr16	29900111	29900145	(60438200)	+	(GCCCG)n	Simple_repeat	1	35	(0)	1456817
16	16.9	0.0	0.0	chr16	29900223	29900255	(60438090)	+	(CCGA)n	Simple_repeat	1	33	(0)	1456818
16	21.8	5.0	1.6	chr16	29900306	29900365	(60437980)	+	(CCGCC)n	Simple_repeat	1	63	(0)	1456819
13	21.1	2.6	0.0	chr16	30010872	30010909	(60327436)	+	(GCCCCT)n	Simple_repeat	1	39	(0)	1457056
18	37.2	0.0	0.0	chr16	30011140	30011212	(60327133)	+	(GC)n	Simple_repeat	1	73	(0)	1457057
1422	20.6	1.7	1.6	chr16	30096876	30097207	(60241138)	+	LTR10B2	LTR/ERV1	187	503	(0)	1457253
11309	12.1	2.7	1.0	chr16	30097209	30099040	(60239305)	+	HERVIP10B3-int	LTR/ERV1	1	1864	(5739)	1457253
13	25.3	2.0	2.0	chr16	30585555	30585603	(59752742)	+	G-rich	Low_complexity	1	50	(0)	1458400
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
13	27.9	1.7	3.3	chr16	30949046	30949105	(59389240)	+	(GCTCCG)n	Simple_repeat	1	61	(0)	1459271
12	21.1	0.0	2.9	chr16	31042146	31042180	(59296165)	+	(CTG)n	Simple_repeat	1	35	(0)	1459474
15	18.7	4.3	4.2	chr16	31142906	31142951	(59195394)	+	(GC)n	Simple_repeat	1	48	(0)	1459691
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
22	13.8	1.9	3.8	chr16	49408052	49408103	(40930242)	+	(TCCCCT)n	Simple_repeat	1	53	(0)	1470482
25	22.8	2.5	2.4	chr16	50153139	50153218	(40185127)	+	G-rich	Low_complexity	1	82	(0)	1471932
18	22.7	4.8	4.5	chr16	53130468	53130551	(37207794)	+	(GGC)n	Simple_repeat	1	88	(0)	1477320
13	11.1	3.2	3.1	chr16	53130995	53131025	(37207320)	+	(CCCT)n	Simple_repeat	1	32	(0)	1477321
16	11.2	0.0	3.2	chr16	53131065	53131095	(37207250)	+	(GCC)n	Simple_repeat	1	31	(0)	1477322
12	28.7	0.0	2.1	chr16	56194521	56194568	(34143777)	+	(GGCTC)n	Simple_repeat	1	48	(0)	1482665
15	3.8	0.0	9.1	chr16	56730007	56730039	(33608306)	+	(GCCCC)n	Simple_repeat	1	33	(0)	1483652
20	9.2	0.0	2.7	chr16	57245497	57245533	(33092812)	+	(GGGCC)n	Simple_repeat	1	37	(0)	1484629
17	29.4	0.0	3.0	chr16	57284711	57284776	(33053569)	+	(CCG)n	Simple_repeat	1	66	(0)	1484720
12	23.8	0.0	6.0	chr16	58001348	58001397	(32336948)	+	(CCGCC)n	Simple_repeat	1	50	(0)	1486244
12	23.3	2.5	0.0	chr16	58001525	58001564	(32336781)	+	(CGAGGA)n	Simple_repeat	1	41	(0)	1486245
382	30.5	11.9	0.0	chr16	58653035	58653211	(31685134)	C	MER102a	DNA/hAT-Charlie	(10)	320	120	1487546
18	17.6	0.0	0.0	chr16	58734013	58734044	(31604301)	+	(GT)n	Simple_repeat	1	32	(0)	1487741
100	25.0	2.7	3.2	chr16	66269920	66270257	(24068088)	+	GA-rich	Low_complexity	1	347	(0)	1499411
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
15	8.9	0.0	0.0	chr16	66934335	66934358	(23403987)	+	(GCC)n	Simple_repeat	1	24	(0)	1500709
15	8.8	10.8	0.0	chr16	67000498	67000534	(23337811)	+	(CACG)n	Simple_repeat	1	41	(0)	1500857
12	22.1	2.7	0.0	chr16	67178507	67178543	(23159802)	+	G-rich	Low_complexity	1	38	(0)	1501222
18	15.5	4.7	0.0	chr16	67178736	67178778	(23159567)	+	(CCCA)n	Simple_repeat	1	45	(0)	1501223
13	21.6	4.7	4.5	chr16	67279303	67279366	(23058979)	+	G-rich	Low_complexity	1	67	(0)	1501369
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
13	4.1	0.0	9.7	chr16	67660948	67660978	(22677367)	+	(GGGC)n	Simple_repeat	1	31	(0)	1502113
23	8.6	5.8	1.8	chr16	68510477	68510491	(21827854)	+	A-rich	Low_complexity	1	17	(0)	1503658
2390	8.8	0.6	1.9	chr16	68510492	68510808	(21827537)	+	AluSq2	SINE/Alu	1	313	(0)	1503659
15	27.2	0.0	3.5	chr16	68737345	68737401	(21600944)	+	(CCGGC)n	Simple_repeat	1	57	(0)	1504212
13	0.0	0.0	0.0	chr16	68737445	68737461	(21600884)	+	(GCT)n	Simple_repeat	1	17	(0)	1504213
1056	14.4	0.0	3.0	chr16	68745208	68745374	(21592971)	+	AluJo	SINE/Alu	9	170	(142)	1504231
18	0.0	0.0	0.0	chr16	70382052	70382071	(19956274)	+	(T)n	Simple_repeat	1	20	(0)	1507865
2181	10.2	1.3	0.0	chr16	70547595	70547889	(19790456)	C	AluSx1	SINE/Alu	(13)	299	1	1508248
636	2.7	0.0	0.0	chr16	70779036	70779109	(19559236)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	1508603
1305	17.8	4.6	3.9	chr16	71484733	71485037	(18853308)	+	Charlie4a	DNA/hAT-Charlie	38	344	(164)	1509765
17	5.0	0.0	0.0	chr16	71526070	71526090	(18812255)	+	(TC)n	Simple_repeat	1	21	(0)	1509849
408	23.3	6.2	3.5	chr16	75110462	75110708	(15227637)	+	L1ME2z	LINE/L1	6319	6442	(2)	1516111
183	15.8	0.0	0.0	chr16	75110712	75110748	(15227597)	C	L2a	LINE/L2	(19)	3407	3375	1516112
16	4.5	0.0	0.0	chr16	75110817	75110839	(15227506)	+	(TGGC)n	Simple_repeat	1	23	(0)	1516113
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
435	30.9	6.8	2.4	chr16	77967886	77968085	(12370260)	+	MIRb	SINE/MIR	6	208	(60)	1520856
184	27.1	13.7	6.1	chr16	81730244	81730357	(8607988)	+	MamTip2	DNA/hAT-Tip100	182	305	(0)	1527883
16	8.2	0.0	0.0	chr16	82170264	82170289	(8168056)	+	(CGCCC)n	Simple_repeat	1	26	(0)	1528775
289	27.0	9.4	1.7	chr16	84308474	84308590	(6029755)	C	L2b	LINE/L2	(210)	3165	3039	1532568
2252	10.0	0.3	0.0	chr16	84841603	84841893	(5496452)	C	AluSx1	SINE/Alu	(19)	293	2	1533679
44	18.1	0.0	1.1	chr16	84842275	84842364	(5495981)	+	(CCTC)n	Simple_repeat	1	90	(0)	1533680
2276	12.0	0.3	0.0	chr16	84842365	84842673	(5495672)	C	AluSx	SINE/Alu	(2)	310	1	1533681
13	17.9	2.4	2.4	chr16	84842674	84842686	(5495659)	+	(TCTT)n	Simple_repeat	3	16	(0)	1533682
579	24.6	4.1	1.7	chr16	85332362	85332560	(5005785)	C	MIRb	SINE/MIR	(39)	229	31	1534653
15	10.2	9.1	2.1	chr16	85799767	85799810	(4538535)	+	(GGCCG)n	Simple_repeat	1	48	(0)	1535469
469	30.0	1.2	0.3	chr16	87187008	87188168	(3150177)	+	(GT)n	Simple_repeat	1	1174	(0)	1537970
484	22.0	8.3	0.0	chr16	87589379	87589510	(2748835)	+	MER5A1	DNA/hAT-Charlie	1	144	(22)	1538732
14	12.6	0.0	0.0	chr16	87608555	87608581	(2729764)	+	(GGAGA)n	Simple_repeat	1	27	(0)	1538772
2008	13.2	1.0	0.3	chr16	87608757	87609051	(2729294)	+	AluJb	SINE/Alu	2	298	(14)	1538773
229	26.0	14.1	0.0	chr16	87945651	87945796	(2392549)	+	MLT1K	LTR/ERVL-MaLR	14	183	(412)	1539379
25	16.6	0.0	0.0	chr16	88443416	88443463	(1894882)	+	(ACGC)n	Simple_repeat	1	48	(0)	1539966
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
12	21.3	4.4	2.1	chr16	88706337	88706381	(1631964)	+	(GCCC)n	Simple_repeat	1	47	(0)	1540345
15	23.0	0.0	5.4	chr16	89167665	89167720	(1170625)	+	(GCCCCCA)n	Simple_repeat	1	56	(0)	1540854
182	34.6	5.5	1.9	chr16	89565010	89565115	(773230)	+	LFSINE_Vert	SINE/tRNA	309	418	(41)	1541485
359	34.0	12.8	1.9	chr16	89699978	89700193	(638152)	C	MIRb	SINE/MIR	(13)	255	13	1541695
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
971	9.2	0.8	0.0	chr17	996420	996550	(82260891)	C	AluSx3	SINE/Alu	(179)	132	1	1546196
415	28.9	1.6	0.0	chr17	1293869	1293989	(81963452)	+	MIRb	SINE/MIR	118	240	(28)	1546787
924	12.7	0.0	4.9	chr17	1585546	1585687	(81671754)	C	AluJr4	SINE/Alu	(177)	135	1	1547409
14	13.4	7.0	2.2	chr17	1724837	1724879	(81532562)	+	(GCCCCA)n	Simple_repeat	1	46	(0)	1547675
17	26.5	0.0	3.2	chr17	1829801	1829862	(81427579)	+	(CCCGC)n	Simple_repeat	1	62	(0)	1547918
14	12.8	6.5	4.1	chr17	2058469	2058514	(81198927)	+	(GCGCG)n	Simple_repeat	1	49	(0)	1548367
2301	9.0	0.0	3.1	chr17	2725091	2725411	(80532030)	+	AluSx1	SINE/Alu	1	311	(1)	1549783
341	25.9	10.1	3.0	chr17	2750082	2750266	(80507175)	+	MIR3	SINE/MIR	33	238	(30)	1549848
13	18.9	0.0	0.0	chr17	3755133	3755162	(79502279)	+	(CGC)n	Simple_repeat	1	30	(0)	1551644
14	8.2	3.9	0.0	chr17	4142924	4142949	(79114492)	+	(GCC)n	Simple_repeat	1	27	(0)	1552422
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
13	9.4	8.8	0.0	chr17	4413065	4413098	(78844343)	+	(CCTCCTT)n	Simple_repeat	1	37	(0)	1553012
673	27.9	8.7	4.0	chr17	4493106	4493378	(78764063)	C	L2c	LINE/L2	(0)	3387	3101	1553204
475	35.8	9.0	4.9	chr17	4493552	4493706	(78763735)	C	L2c	LINE/L2	(377)	3042	2891	1553204
9894	8.8	11.7	0.1	chr17	4708205	4709597	(78547844)	C	LTR12C	LTR/ERV1	(1)	1578	2	1553585
589	7.0	0.0	0.0	chr17	4709598	4709668	(78547773)	+	AluSz6	SINE/Alu	242	312	(0)	1553586
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
11	18.8	8.0	1.9	chr17	5438851	5438900	(77818541)	+	(GCAGGC)n	Simple_repeat	1	54	(0)	1555141
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
533	30.6	1.6	4.2	chr17	5897717	5897907	(77359534)	C	MIRb	SINE/MIR	(59)	209	24	1556006
737	23.0	10.5	9.2	chr17	5897905	5898196	(77359245)	C	L2a	LINE/L2	(1)	3425	3130	1556007
2719	19.6	11.2	0.5	chr17	6099115	6099234	(77158207)	+	LTR9B	LTR/ERV1	1	129	(515)	1556401
2274	10.6	0.0	0.3	chr17	6099235	6099535	(77157906)	+	AluSc	SINE/Alu	1	300	(9)	1556402
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
18	10.4	0.0	0.0	chr17	6444345	6444375	(76813066)	+	(GGGGCG)n	Simple_repeat	1	31	(0)	1557111
266	33.4	16.1	5.4	chr17	6493315	6493649	(76763792)	+	L3	LINE/CR1	3702	4079	(20)	1557185
2140	10.6	0.3	4.4	chr17	6665648	6665967	(76591474)	C	AluSx	SINE/Alu	(5)	307	1	1557492
300	10.0	0.0	0.0	chr17	6665969	6666008	(76591433)	C	Alu	SINE/Alu	(92)	41	2	1557493
249	19.2	7.1	0.0	chr17	6666043	6666094	(76591347)	+	MER112	DNA/hAT-Charlie	199	254	(7)	1557494
13	15.9	2.6	5.0	chr17	7014818	7014856	(76242585)	+	(GCG)n	Simple_repeat	1	40	(0)	1558088
17	26.0	4.1	1.9	chr17	7014959	7015034	(76242407)	+	G-rich	Low_complexity	1	77	(0)	1558089
17	27.6	1.7	0.0	chr17	7178568	7178625	(76078816)	+	G-rich	Low_complexity	1	59	(0)	1558391
16	18.4	7.9	1.5	chr17	7262511	7262573	(75994868)	+	G-rich	Low_complexity	1	68	(0)	1558514
12	4.3	8.3	0.0	chr17	7352010	7352033	(75905408)	+	(CCAGT)n	Simple_repeat	1	26	(0)	1558666
13	15.2	0.0	3.2	chr17	7352094	7352124	(75905317)	+	G-rich	Low_complexity	1	31	(0)	1558667
31	28.2	2.5	1.6	chr17	7561967	7562077	(75695364)	+	(GGC)n	Simple_repeat	1	145	(0)	1559082
13	20.8	0.0	0.0	chr17	7562078	7562110	(75695331)	+	(GCGGC)n	Simple_repeat	1	33	(0)	1559083
11	22.0	2.2	4.3	chr17	7573782	7573827	(75683614)	+	(GCGAGG)n	Simple_repeat	1	47	(0)	1559097
2238	7.7	0.0	7.4	chr17	7656655	7656980	(75600461)	C	AluSp	SINE/Alu	(11)	302	1	1559256
2145	7.1	4.1	0.4	chr17	7685457	7685736	(75571705)	C	AluSq2	SINE/Alu	(22)	291	1	1559335
2720	19.7	11.3	4.1	chr17	7685737	7685956	(75571485)	+	L1ME2	LINE/L1	5919	6157	(7)	1559334
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
13	21.9	2.3	2.2	chr17	7922734	7922777	(75334664)	+	(TGTTTT)n	Simple_repeat	1	45	(0)	1559754
14	24.1	0.0	0.0	chr17	7990074	7990112	(75267329)	+	G-rich	Low_complexity	1	39	(0)	1559894
13	15.3	2.5	4.9	chr17	7990496	7990535	(75266906)	+	(CCAGCCT)n	Simple_repeat	1	41	(0)	1559895
14	12.6	5.7	0.0	chr17	8004169	8004203	(75253238)	+	G-rich	Low_complexity	1	37	(0)	1559928
683	17.7	0.0	8.4	chr17	8079196	8079295	(75178146)	+	MER2B	DNA/TcMar-Tigger	243	336	(0)	1560050
648	1.4	0.0	0.0	chr17	8125746	8125817	(75131624)	+	tRNA-Gly-GGY	tRNA	1	72	(2)	1560137
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
2357	10.3	0.3	0.0	chr17	8210788	8211098	(75046343)	C	AluSx1	SINE/Alu	(0)	312	1	1560324
12	23.1	2.0	4.0	chr17	8965727	8965775	(74291666)	+	(GGCGG)n	Simple_repeat	1	50	(0)	1561790
598	23.6	0.6	9.0	chr17	15332365	15332479	(67924962)	+	MIR	SINE/MIR	70	181	(81)	1572870
374	28.0	11.3	4.1	chr17	15332480	15332676	(67924765)	C	MamRep1879	DNA/hAT-Tip100?	(0)	216	4	1572871
598	23.6	0.6	9.0	chr17	15332677	15332760	(67924681)	+	MIR	SINE/MIR	182	252	(10)	1572870
204	35.2	9.5	0.9	chr17	15491228	15491333	(67766108)	+	MIR3	SINE/MIR	31	146	(62)	1573140
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
352	31.8	7.2	0.7	chr17	17641648	17641802	(65615639)	C	MIRb	SINE/MIR	(61)	207	42	1577038
17	22.1	0.0	0.0	chr17	17700621	17700662	(65556779)	+	GA-rich	Low_complexity	1	42	(0)	1577188
245	25.9	1.2	4.7	chr17	17752872	17752956	(65504485)	+	L2b	LINE/L2	3287	3368	(7)	1577285
289	33.4	14.9	1.9	chr17	17835886	17836193	(65421248)	+	L2b	LINE/L2	3003	3357	(18)	1577444
398	31.8	3.0	0.4	chr17	18224304	18224441	(65033000)	+	MIR	SINE/MIR	113	247	(21)	1578191
14	11.7	0.0	3.3	chr17	18625940	18625969	(64631472)	+	(AAAAC)n	Simple_repeat	1	30	(0)	1578849
959	22.5	7.4	7.4	chr17	18625974	18626299	(64631142)	+	L1MD	LINE/L1	4120	4445	(1701)	1578850
12	11.4	10.9	5.6	chr17	18781074	18781137	(64476304)	+	(CTCCGC)n	Simple_repeat	1	71	(0)	1579119
19	17.4	5.7	4.0	chr17	19004715	19004784	(64252657)	+	(GGCGGC)n	Simple_repeat	1	74	(0)	1579595
200	30.6	0.0	0.0	chr17	19004974	19005022	(64252419)	C	MIR3	SINE/MIR	(90)	118	70	1579596
17	12.7	0.0	0.0	chr17	19285581	19285606	(63971835)	+	(GT)n	Simple_repeat	1	26	(0)	1580346
279	28.1	12.3	0.0	chr17	19285616	19285800	(63971641)	C	AmnSINE1	SINE/5S-Deu-L2	(357)	218	8	1580347
374	23.6	10.3	0.2	chr17	19386185	19386323	(63871118)	C	MIRb	SINE/MIR	(95)	173	18	1580507
301	33.1	9.3	0.0	chr17	19488110	19488245	(63769196)	C	MIRb	SINE/MIR	(116)	152	3	1580698
5796	15.1	4.5	0.9	chr17	20201799	20202824	(63054617)	+	Tigger2b_Pri	DNA/TcMar-Tigger	3	1067	(1)	1582137
470	22.7	0.9	0.9	chr17	20908916	20909026	(62348415)	+	MER125	DNA	4	114	(62)	1583315
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
2851	1.3	0.0	0.0	chr17	28250898	28251206	(55006235)	C	AluYb8	SINE/Alu	(9)	309	1	1588332
948	27.4	4.4	6.7	chr17	28251763	28251889	(55005552)	+	L2a	LINE/L2	3058	3185	(241)	1588333
17	28.6	1.7	0.0	chr17	28745190	28745249	(54512192)	+	(CCTC)n	Simple_repeat	1	61	(0)	1589234
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
842	31.2	0.4	0.8	chr17	29017173	29017411	(54240030)	C	MIRb	SINE/MIR	(14)	254	17	1589773
578	31.7	3.9	2.8	chr17	29017755	29017986	(54239455)	+	MIRb	SINE/MIR	4	245	(23)	1589774
275	33.6	0.0	0.9	chr17	29042850	29042963	(54214478)	+	Eulor8	DNA/TcMar?	381	493	(69)	1589828
2479	6.6	0.6	2.2	chr17	29580762	29581078	(53676363)	C	AluSp	SINE/Alu	(1)	312	1	1590959
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
12	16.9	2.9	2.8	chr17	30235684	30235718	(53021723)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1592201
3351	19.7	8.0	2.9	chr17	30387794	30388775	(52868666)	C	MER52A	LTR/ERV1	(1)	1277	230	1592497
440	37.9	9.1	5.2	chr17	34797942	34798362	(48459079)	+	L2b	LINE/L2	2918	3356	(19)	1601091
201	30.0	3.8	5.4	chr17	35120054	35120243	(48137198)	C	L2b	LINE/L2	(27)	3399	3217	1601737
1468	14.8	4.7	6.2	chr17	35448926	35449044	(47808397)	+	AluJb	SINE/Alu	1	117	(195)	1602227
34	0.0	0.0	0.0	chr17	35449045	35449075	(47808366)	+	(ACA)n	Simple_repeat	1	31	(0)	1602228
1468	14.8	4.7	6.2	chr17	35449076	35449260	(47808181)	+	AluJb	SINE/Alu	132	300	(12)	1602227
18	23.6	0.0	0.0	chr17	35587383	35587428	(47670013)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	1602448
13	20.5	6.7	0.0	chr17	35741251	35741295	(47516146)	+	(CGCTG)n	Simple_repeat	1	48	(0)	1602707
19	22.2	1.9	0.0	chr17	36948809	36948860	(46308581)	+	(CGCGCA)n	Simple_repeat	1	53	(0)	1604977
239	20.7	1.7	0.0	chr17	37609732	37609789	(45647652)	+	L1ME3E	LINE/L1	6115	6173	(69)	1606177
25	19.2	3.4	8.2	chr17	38452083	38452200	(44805241)	+	(CCCT)n	Simple_repeat	1	122	(0)	1607890
16	16.1	0.0	0.0	chr17	38453405	38453422	(44804019)	+	(GC)n	Simple_repeat	1	18	(0)	1607892
46	0.0	0.0	0.0	chr17	38453423	38453461	(44803980)	+	(GT)n	Simple_repeat	1	39	(0)	1607893
16	16.1	0.0	0.0	chr17	38453462	38453472	(44803969)	+	(GC)n	Simple_repeat	1	11	(0)	1607894
19	11.7	2.7	0.0	chr17	38606782	38606818	(44650623)	+	(CCAGAC)n	Simple_repeat	1	38	(0)	1608166
23	14.5	0.0	0.0	chr17	38751735	38751772	(44505669)	+	(A)n	Simple_repeat	1	38	(0)	1608488
698	1.3	0.0	0.0	chr17	38751778	38751854	(44505587)	C	tRNA-Asn-AAC	tRNA	(0)	77	1	1608489
16	15.3	0.0	5.0	chr17	39244266	39244305	(44013136)	+	(CCT)n	Simple_repeat	1	40	(0)	1609615
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
2157	12.6	0.3	0.0	chr17	41735358	41735658	(41521783)	+	AluSx	SINE/Alu	2	303	(9)	1614164
239	28.3	21.0	0.0	chr17	41965982	41966154	(41291287)	+	MIRb	SINE/MIR	35	253	(15)	1614686
504	19.0	10.7	3.7	chr17	41966327	41966490	(41290951)	C	MER96B	DNA/hAT-Tip100	(0)	417	241	1614687
2354	5.5	2.0	0.7	chr17	42155250	42155542	(41101899)	C	AluSx	SINE/Alu	(15)	297	1	1615041
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
20	28.0	0.0	1.5	chr17	42548091	42548157	(40709284)	+	G-rich	Low_complexity	1	67	(0)	1615867
17	12.1	0.0	5.0	chr17	42609505	42609544	(40647897)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	1615974
12	13.9	0.0	8.1	chr17	42609671	42609707	(40647734)	+	(GGCG)n	Simple_repeat	1	37	(0)	1615975
13	15.5	9.3	0.0	chr17	42745050	42745095	(40512346)	+	(GCGCCCC)n	Simple_repeat	1	50	(0)	1616277
17	15.5	0.0	0.0	chr17	42964656	42964684	(40292757)	+	A-rich	Low_complexity	1	29	(0)	1616764
12	11.1	0.0	8.6	chr17	43720762	43720796	(39536645)	+	(GCCTCC)n	Simple_repeat	1	35	(0)	1618471
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
445	27.0	15.6	7.0	chr17	44015221	44015381	(39242060)	+	MIRb	SINE/MIR	8	179	(89)	1619061
25	15.9	0.0	0.0	chr17	44070448	44070489	(39186952)	+	(T)n	Simple_repeat	1	42	(0)	1619180
17	10.8	0.0	0.0	chr17	44308345	44308374	(38949067)	+	(CGAGG)n	Simple_repeat	1	30	(0)	1619670
17	20.2	2.1	2.1	chr17	44656480	44656526	(38600915)	+	(GGC)n	Simple_repeat	1	48	(0)	1620447
2511	6.8	0.3	0.0	chr17	45152268	45152574	(38104867)	C	AluSp	SINE/Alu	(5)	308	1	1621438
612	27.8	5.0	8.2	chr17	45372130	45372399	(37885042)	+	MER46C	DNA/TcMar-Tigger	78	338	(0)	1621918
15	17.0	0.0	0.0	chr17	45405724	45405756	(37851685)	+	(CTCGTC)n	Simple_repeat	1	33	(0)	1621981
1232	24.9	7.4	1.6	chr17	45429136	45429453	(37827988)	C	MER46C	DNA/TcMar-Tigger	(0)	338	1	1622032
11	27.2	2.0	2.0	chr17	45490580	45490629	(37766812)	+	(CCCGCCT)n	Simple_repeat	1	51	(0)	1622141
16	15.2	0.0	7.8	chr17	47821812	47821862	(35435579)	+	(CTCCCCT)n	Simple_repeat	1	51	(0)	1626785
11	22.8	1.9	5.7	chr17	48003410	48003461	(35253980)	+	G-rich	Low_complexity	1	53	(0)	1627099
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
13	11.4	0.0	6.2	chr17	56914103	56914134	(26343307)	+	(GCGG)n	Simple_repeat	1	32	(0)	1642230
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
13	19.1	0.0	0.0	chr17	59106906	59106935	(24150506)	+	G-rich	Low_complexity	1	30	(0)	1646445
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
16	5.2	0.0	0.0	chr17	61863657	61863676	(21393765)	+	(A)n	Simple_repeat	1	20	(0)	1651744
28	22.5	1.5	8.2	chr17	62627530	62627662	(20629779)	+	(CCCCCT)n	Simple_repeat	1	135	(0)	1653391
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
2029	9.7	7.0	0.0	chr17	63848520	63848797	(19408644)	+	AluSx	SINE/Alu	1	299	(13)	1655457
12	22.6	1.9	5.7	chr17	63848843	63848894	(19408547)	+	(CCAG)n	Simple_repeat	1	53	(0)	1655458
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
15	28.8	1.9	6.5	chr17	64975604	64975708	(18281733)	+	(ACGCC)n	Simple_repeat	1	107	(0)	1657692
16	16.6	0.0	2.8	chr17	66564991	66565026	(16692415)	+	(CAC)n	Simple_repeat	1	36	(0)	1660467
307	28.3	5.0	0.9	chr17	66565067	66565180	(16692261)	+	MIRb	SINE/MIR	58	176	(92)	1660468
16	21.6	4.1	0.0	chr17	67378916	67378966	(15878475)	+	G-rich	Low_complexity	1	53	(0)	1661914
4576	16.3	3.5	3.4	chr17	67974293	67975154	(15282287)	C	MER21B	LTR/ERVL	(5)	863	1	1663218
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
17	30.2	1.1	4.4	chr17	68247975	68248063	(15009378)	+	(GGCGC)n	Simple_repeat	1	90	(0)	1663830
15	24.6	0.0	5.2	chr17	73342157	73342214	(9915227)	+	(CCCCT)n	Simple_repeat	1	58	(0)	1672125
309	30.3	0.0	6.9	chr17	73786598	73786799	(9470642)	C	MER126	DNA	(172)	277	90	1672947
58	30.2	1.8	9.6	chr17	74514143	74514815	(8742626)	+	(TGACAGG)n	Simple_repeat	1	685	(0)	1674300
15	20.2	0.0	6.7	chr17	74852344	74852388	(8405053)	+	(CG)n	Simple_repeat	1	45	(0)	1674875
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
15	13.3	3.0	0.0	chr17	74893655	74893687	(8363754)	+	G-rich	Low_complexity	1	34	(0)	1674960
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
17	18.1	5.8	1.8	chr17	76501390	76501441	(6756000)	+	(GCG)n	Simple_repeat	1	55	(0)	1678147
761	11.5	0.9	0.0	chr17	76727396	76727499	(6529942)	C	AluJb	SINE/Alu	(207)	105	1	1678616
326	29.9	3.8	2.5	chr17	76995311	76995468	(6261973)	C	L1ME4a	LINE/L1	(2)	6122	5963	1679192
526	30.3	6.7	4.6	chr17	76995502	76995669	(6261772)	C	LTR78	LTR/ERV1	(59)	1245	1072	1679193
2463	20.6	2.8	9.1	chr17	76995670	76996131	(6261310)	+	MER34B	LTR/ERV1	1	456	(109)	1679194
18	10.3	2.1	6.2	chr17	77373272	77373318	(5884123)	+	G-rich	Low_complexity	1	48	(0)	1679958
14	18.9	2.8	0.0	chr17	77528733	77528768	(5728673)	+	G-rich	Low_complexity	1	37	(0)	1680186
195	27.1	0.5	2.0	chr17	77790612	77790711	(5466730)	C	L2c	LINE/L2	(272)	3115	3019	1680641
1751	23.7	3.0	4.5	chr17	77790804	77791130	(5466311)	+	MER63D	DNA/hAT-Blackjack	6	333	(728)	1680647
198	40.6	1.0	0.5	chr17	77828432	77829343	(5428098)	+	(TG)n	Simple_repeat	1	921	(0)	1680711
269	36.0	3.7	0.1	chr17	78231624	78231784	(5025657)	C	MIRb	SINE/MIR	(75)	193	22	1681460
221	36.7	5.8	0.0	chr17	78351958	78352055	(4905386)	C	MER5A	DNA/hAT-Charlie	(26)	163	60	1681712
20	26.2	4.4	4.2	chr17	78352946	78352958	(4904483)	+	(GCGGCC)n	Simple_repeat	1	22	(96)	1681715
21	14.8	0.0	4.1	chr17	78352959	78353007	(4904434)	+	G-rich	Low_complexity	1	49	(0)	1681716
20	26.2	4.4	4.2	chr17	78353008	78353058	(4904383)	+	(GCGGCC)n	Simple_repeat	23	118	(0)	1681715
14	14.2	3.2	0.0	chr17	78353182	78353212	(4904229)	+	(CGCC)n	Simple_repeat	1	32	(0)	1681717
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
21	6.3	2.9	0.0	chr17	79742009	79742042	(3515399)	+	(CCCCTG)n	Simple_repeat	1	35	(0)	1683854
13	19.2	0.0	0.0	chr17	80035875	80035904	(3221537)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1684338
16	14.9	0.0	0.0	chr17	80147172	80147202	(3110239)	+	(ACGT)n	Simple_repeat	1	31	(0)	1684529
2534	6.2	0.3	0.0	chr17	80415956	80416260	(2841181)	+	AluSp	SINE/Alu	1	306	(7)	1684983
837	12.2	0.9	0.0	chr17	80441002	80441116	(2816325)	+	AluJo	SINE/Alu	3	118	(194)	1685019
14	30.7	2.4	3.5	chr17	80981450	80981534	(2275907)	+	(GCTGCC)n	Simple_repeat	1	87	(0)	1685732
16	6.4	12.1	0.0	chr17	81512837	81512869	(1744572)	+	(GC)n	Simple_repeat	1	37	(0)	1686352
1997	19.2	3.7	8.2	chr17	82174354	82174999	(1082442)	+	LTR6A	LTR/ERV1	1	564	(0)	1687269
21	13.1	0.0	4.3	chr17	82273724	82273769	(983672)	+	(GGCGG)n	Simple_repeat	1	46	(0)	1687398
19	23.6	0.0	4.6	chr17	82648096	82648160	(609281)	+	G-rich	Low_complexity	1	65	(0)	1688029
29	18.7	0.0	4.1	chr17	82648451	82648523	(608918)	+	(CGTG)n	Simple_repeat	1	73	(0)	1688030
156	18.1	1.6	0.6	chr17	82648573	82648887	(608554)	+	G-rich	Low_complexity	1	320	(0)	1688031
20	22.4	3.1	1.5	chr17	82735524	82735587	(521854)	+	(CCGCC)n	Simple_repeat	1	66	(0)	1688167
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
37	23.7	1.1	8.9	chr18	11981285	11981472	(68391813)	+	G-rich	Low_complexity	1	190	(0)	1706731
679	25.8	7.3	1.3	chr18	12086473	12089556	(68283729)	+	(CCTGGC)n	Simple_repeat	1	3310	(0)	1706903
32	11.8	0.0	1.8	chr18	12658110	12658166	(67715119)	+	(CGCCC)n	Simple_repeat	1	57	(0)	1707865
14	24.6	1.4	6.9	chr18	12658378	12658448	(67714837)	+	(GCGG)n	Simple_repeat	1	72	(0)	1707866
18	9.4	0.0	5.3	chr18	12883964	12884001	(67489284)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1708293
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
15	19.1	5.9	3.7	chr18	12884254	12884266	(67489019)	+	(GC)n	Simple_repeat	1	54	(0)	1708295
448	24.6	0.6	0.4	chr18	13822909	13823988	(66549297)	+	(CAAC)n	Simple_repeat	1	1086	(0)	1709568
2186	6.9	0.0	0.7	chr18	21611831	21612107	(58761178)	C	AluSq	SINE/Alu	(5)	308	34	1712919
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
51	2.1	0.0	0.0	chr18	26550558	26550605	(53822680)	+	(AC)n	Simple_repeat	1	48	(0)	1721102
18	19.1	7.5	1.4	chr18	32769561	32769627	(47603658)	+	(TCCC)n	Simple_repeat	1	72	(0)	1729863
894	14.5	0.0	0.8	chr18	35266997	35267113	(45106172)	+	AluJo	SINE/Alu	1	116	(196)	1733076
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
16	0.0	0.0	0.0	chr18	37243909	37243928	(43129357)	+	(CGG)n	Simple_repeat	1	20	(0)	1735792
26	11.4	0.0	0.0	chr18	37244144	37244181	(43129104)	+	(T)n	Simple_repeat	1	38	(0)	1735793
17	14.8	6.0	5.6	chr18	37394227	37394234	(42979051)	+	(AGGCGCG)n	Simple_repeat	1	67	(0)	1735988
15	23.8	5.5	0.0	chr18	37394235	37394289	(42978996)	+	G-rich	Low_complexity	1	58	(0)	1735989
2293	18.5	0.6	0.3	chr18	43486269	43486632	(36886653)	+	HERVL18-int	LTR/ERVL	2720	3084	(2963)	1744269
1287	22.4	14.3	4.8	chr18	43486634	43487154	(36886131)	+	LTR18B	LTR/ERVL	36	614	(0)	1744270
429	26.4	14.8	3.1	chr18	45760558	45760717	(34612568)	C	MamRep38	DNA/hAT	(108)	187	6	1747388
13	16.8	0.0	5.4	chr18	45837920	45837956	(34535329)	+	(CCCG)n	Simple_repeat	1	37	(0)	1747505
2343	8.9	0.0	0.0	chr18	46027879	46028170	(34345115)	+	AluSz	SINE/Alu	1	292	(20)	1747843
26	29.6	3.7	0.0	chr18	46433519	46433625	(33939660)	+	G-rich	Low_complexity	1	111	(0)	1748644
277	35.9	1.5	4.5	chr18	46433723	46433923	(33939362)	+	L3	LINE/CR1	3903	4097	(2)	1748645
14	15.1	0.0	10.9	chr18	46917271	46917325	(33455960)	+	(CCTCC)n	Simple_repeat	1	55	(0)	1749455
548	25.9	4.5	2.5	chr18	47176501	47176574	(33196711)	+	Charlie5	DNA/hAT-Charlie	2378	2451	(173)	1749803
2238	4.7	0.0	0.4	chr18	47176575	47176831	(33196454)	C	AluY	SINE/Alu	(17)	294	39	1749804
17	18.8	1.2	9.8	chr18	47749224	47749304	(32623981)	+	(CGCCCCG)n	Simple_repeat	1	82	(0)	1750733
16	14.4	2.5	2.4	chr18	47930512	47930556	(32442729)	+	G-rich	Low_complexity	1	45	(0)	1751013
37	9.5	0.0	0.0	chr18	47930558	47930614	(32442671)	+	(GGGAG)n	Simple_repeat	1	57	(0)	1751014
16	11.1	0.0	0.0	chr18	48410449	48410477	(31962808)	+	(CCCCG)n	Simple_repeat	1	29	(0)	1751864
236	20.7	13.4	0.0	chr18	48834564	48834621	(31538664)	C	MER5A	DNA/hAT-Charlie	(113)	76	10	1752510
274	16.3	0.0	5.8	chr18	48834631	48834682	(31538603)	C	MIR3	SINE/MIR	(48)	160	112	1752511
204	24.4	5.5	2.3	chr18	48834854	48834941	(31538344)	C	MamRTE1	LINE/RTE-BovB	(3540)	272	182	1752512
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
12	26.9	0.0	6.6	chr18	50374924	50374984	(29998301)	+	(GCCCC)n	Simple_repeat	1	61	(0)	1755032
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
900	9.8	0.0	0.0	chr18	51198420	51198531	(29174754)	C	AluSx3	SINE/Alu	(12)	299	188	1756520
2601	6.0	0.0	1.7	chr18	51198533	51198831	(29174454)	+	AluSg	SINE/Alu	9	302	(8)	1756521
13	15.7	9.6	1.8	chr18	51417842	51417893	(28955392)	+	(TCCTTCTT)n	Simple_repeat	1	57	(0)	1756944
4183	10.0	3.8	0.3	chr18	51418004	51418646	(28954639)	+	LTR9C	LTR/ERV1	1	666	(0)	1756945
2383	9.9	0.0	2.0	chr18	54269014	54269316	(26103969)	+	AluSq	SINE/Alu	1	297	(16)	1761008
14	26.0	0.0	0.0	chr18	54269571	54269611	(26103674)	+	(GAC)n	Simple_repeat	1	41	(0)	1761009
22	13.0	0.0	0.0	chr18	54828793	54828826	(25544459)	+	(TG)n	Simple_repeat	1	34	(0)	1761828
20	21.3	1.6	3.1	chr18	56638607	56638669	(23734616)	+	G-rich	Low_complexity	1	64	(0)	1764412
60	22.2	6.5	2.2	chr18	58781776	58781990	(21591295)	+	(TG)n	Simple_repeat	1	229	(0)	1767840
253	30.2	10.9	6.7	chr18	58850526	58850795	(21522490)	+	Tigger15a	DNA/TcMar-Tigger	194	476	(239)	1768014
2010	13.9	0.7	1.3	chr18	58850898	58851199	(21522086)	+	AluSz	SINE/Alu	1	300	(12)	1768015
17	0.0	0.0	0.0	chr18	59308542	59308560	(21064725)	+	(T)n	Simple_repeat	1	19	(0)	1768761
2394	8.4	0.0	1.9	chr18	59863826	59864135	(20509150)	C	AluY	SINE/Alu	(7)	304	1	1769668
303	23.7	1.7	0.0	chr18	59864628	59864686	(20508599)	+	Alu	SINE/Alu	1	60	(73)	1769669
17	3.2	0.0	10.3	chr18	59899887	59899925	(20473360)	+	(GCGGG)n	Simple_repeat	1	39	(0)	1769753
16	20.1	4.3	0.0	chr18	59900267	59900312	(20472973)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	1769754
12	12.5	0.0	3.6	chr18	61333547	61333574	(19039711)	+	(GGCAG)n	Simple_repeat	1	28	(0)	1771767
21	25.4	3.4	3.3	chr18	62716075	62716163	(17657122)	+	(CCG)n	Simple_repeat	1	92	(0)	1773934
17	27.3	4.7	4.5	chr18	62716164	62716181	(17657104)	+	(CCTCGG)n	Simple_repeat	1	112	(0)	1773935
953	20.4	0.6	0.0	chr18	62752077	62752238	(17621047)	C	FRAM	SINE/Alu	(11)	165	3	1773989
588	10.8	2.4	0.0	chr18	63022788	63022870	(17350415)	C	AluJo	SINE/Alu	(227)	85	1	1774423
13	23.3	0.0	0.0	chr18	69469719	69469753	(10903532)	+	(AGGAC)n	Simple_repeat	1	35	(0)	1783229
1436	24.3	20.9	1.6	chr18	74280905	74281741	(6091544)	C	L2a	LINE/L2	(562)	2857	1817	1789673
12	13.2	5.7	2.7	chr18	74496247	74496281	(5877004)	+	(GTGGC)n	Simple_repeat	1	37	(0)	1789971
534	27.0	8.0	8.8	chr18	76821629	76821813	(3551472)	+	L1ME1	LINE/L1	5945	6124	(55)	1792724
241	16.2	0.0	0.0	chr18	76821815	76821851	(3551434)	+	Alu	SINE/Alu	100	136	(30)	1792726
904	24.4	8.0	8.9	chr18	77088954	77089345	(3283940)	+	LTR53	LTR/ERVL	104	491	(28)	1793043
524	26.0	7.1	5.0	chr18	77089366	77089668	(3283617)	+	MLT1C	LTR/ERVL-MaLR	142	451	(16)	1793042
684	30.8	6.3	7.6	chr18	79181110	79182171	(1191114)	C	L1MEf	LINE/L1	(4706)	1709	606	1795280
410	33.3	8.9	2.4	chr18	79182288	79182496	(1190789)	C	L1MEf	LINE/L1	(5916)	484	261	1795280
12	21.1	0.0	0.0	chr18	79784063	79784091	(589194)	+	GA-rich	Low_complexity	1	29	(0)	1795770
18	38.9	0.0	4.1	chr18	79797416	79797562	(575723)	+	(TGTATG)n	Simple_repeat	1	147	(0)	1795787
12	7.4	0.0	11.1	chr18	79797662	79797697	(575588)	+	(TGTGAG)n	Simple_repeat	1	36	(0)	1795788
12	22.5	2.3	2.3	chr18	79797884	79797926	(575359)	+	G-rich	Low_complexity	1	44	(0)	1795789
662	19.5	9.4	0.0	chr19	295441	295594	(58322022)	+	MER53	DNA/hAT	24	193	(0)	1796702
28	23.0	6.9	4.1	chr19	489272	489430	(58128186)	+	(CCCCGAC)n	Simple_repeat	1	170	(0)	1797014
258	29.4	4.8	1.1	chr19	1174393	1174528	(57443088)	+	MIR	SINE/MIR	30	174	(56)	1798319
2259	12.9	0.0	0.0	chr19	1174662	1174972	(57442644)	+	AluSx1	SINE/Alu	2	312	(0)	1798320
226	32.6	4.3	0.0	chr19	1315683	1315771	(57301845)	+	MIR	SINE/MIR	45	137	(125)	1798556
189	32.6	2.2	0.0	chr19	1438118	1438212	(57179404)	C	MIR3	SINE/MIR	(80)	182	83	1798779
2034	6.8	8.3	0.0	chr19	1897324	1897588	(56720028)	C	AluY	SINE/Alu	(20)	291	3	1799708
2305	8.6	2.9	0.3	chr19	2095740	2096043	(56521573)	C	AluSx	SINE/Alu	(0)	312	1	1800144
729	24.7	8.3	1.0	chr19	2124097	2124407	(56493209)	+	MER68	LTR/ERVL	125	460	(103)	1800173
36	0.0	0.0	0.0	chr19	2308143	2308175	(56309441)	+	(GCC)n	Simple_repeat	1	33	(0)	1800515
13	9.9	2.6	7.7	chr19	2308185	2308222	(56309394)	+	(CCG)n	Simple_repeat	1	39	(0)	1800516
13	17.7	3.1	0.0	chr19	2328712	2328743	(56288873)	+	(GGC)n	Simple_repeat	1	33	(0)	1800571
12	27.9	2.9	4.2	chr19	2494917	2494986	(56122630)	+	(GGCGCC)n	Simple_repeat	1	72	(0)	1800934
12	18.3	0.0	3.0	chr19	2579335	2579367	(56038249)	+	G-rich	Low_complexity	1	33	(0)	1801150
26	22.9	3.2	6.2	chr19	2702783	2702901	(55914715)	+	G-rich	Low_complexity	1	115	(0)	1801483
355	32.8	0.8	5.2	chr19	2703057	2703191	(55914425)	C	MIRb	SINE/MIR	(43)	225	97	1801484
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
2183	14.1	0.3	0.0	chr19	2922576	2922887	(55694729)	C	AluSq2	SINE/Alu	(0)	313	1	1801925
4553	22.0	9.7	1.4	chr19	2922888	2923529	(55694087)	+	MER68-int	LTR/ERVL	2270	2990	(0)	1801924
2315	8.2	1.9	0.7	chr19	2961804	2962107	(55655509)	C	AluY	SINE/Alu	(3)	308	1	1802024
369	29.6	2.3	0.0	chr19	2962110	2962234	(55655382)	+	L1ME1	LINE/L1	6039	6166	(13)	1802025
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
2347	9.8	0.0	0.0	chr19	3306972	3307276	(55310340)	+	AluSx1	SINE/Alu	2	306	(6)	1802892
22	27.1	1.1	4.2	chr19	3869029	3869056	(54748560)	+	(CCCCGCG)n	Simple_repeat	1	75	(21)	1804195
13	26.1	4.9	1.6	chr19	3869057	3869117	(54748499)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1804196
22	27.1	1.1	4.2	chr19	3869118	3869123	(54748493)	+	(CCCCGCG)n	Simple_repeat	76	96	(0)	1804195
267	25.6	3.5	0.0	chr19	4173320	4173409	(54444207)	C	MIR3	SINE/MIR	(53)	155	64	1804947
227	17.9	11.9	0.0	chr19	4305522	4305614	(54312002)	+	MIRc	SINE/MIR	37	152	(116)	1805324
18	23.8	1.8	1.8	chr19	4402651	4402706	(54214910)	+	(GCG)n	Simple_repeat	1	57	(0)	1805516
14	16.3	1.8	8.6	chr19	4760056	4760112	(53857504)	+	G-rich	Low_complexity	1	58	(0)	1806381
12	20.8	1.7	8.3	chr19	5137860	5137918	(53479698)	+	(CCCAG)n	Simple_repeat	1	60	(0)	1807235
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
2261	13.4	0.0	0.6	chr19	5403722	5404035	(53213581)	+	AluSx	SINE/Alu	1	312	(0)	1807888
16	3.2	5.6	5.3	chr19	5404039	5404104	(53213512)	+	(AAAGA)n	Simple_repeat	1	66	(0)	1807889
22	28.0	4.7	0.0	chr19	5404105	5404120	(53213496)	+	GA-rich	Low_complexity	4	89	(0)	1807890
181	33.3	3.6	3.6	chr19	5536365	5536448	(53081168)	C	L2b	LINE/L2	(537)	2882	2799	1808287
199	28.4	2.4	0.0	chr19	5536785	5536865	(53080751)	+	MIR3	SINE/MIR	42	124	(84)	1808288
19	3.9	0.0	0.0	chr19	5539526	5539552	(53078064)	+	(GGGGA)n	Simple_repeat	1	27	(0)	1808298
12	16.3	2.8	2.7	chr19	6476009	6476044	(52141572)	+	(CCCAGTC)n	Simple_repeat	1	37	(0)	1810328
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
16	26.7	2.8	6.4	chr19	7920491	7920596	(50697020)	+	(AGCCGG)n	Simple_repeat	1	109	(0)	1813980
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
192	33.9	0.0	11.0	chr19	8002619	8002764	(50614852)	C	L2c	LINE/L2	(173)	3214	3085	1814125
1949	7.5	0.0	0.0	chr19	8389534	8389773	(50227843)	C	AluSg	SINE/Alu	(69)	241	2	1815197
231	19.0	6.9	3.5	chr19	8389784	8389868	(50227748)	C	MIR1_Amn	SINE/MIR	(78)	184	97	1815198
324	32.7	1.7	8.8	chr19	8552616	8552785	(50064831)	C	MIRb	SINE/MIR	(91)	177	12	1815563
286	28.1	3.5	7.3	chr19	8552851	8553000	(50064616)	C	LTR91	LTR/ERVL	(15)	184	41	1815564
19	8.1	0.0	0.0	chr19	8553059	8553084	(50064532)	+	(GT)n	Simple_repeat	1	26	(0)	1815565
13	11.1	3.2	3.1	chr19	10096519	10096549	(48521067)	+	(CAG)n	Simple_repeat	1	32	(0)	1818889
14	15.9	0.0	0.0	chr19	10568987	10569014	(48048602)	+	(CGC)n	Simple_repeat	1	28	(0)	1820117
354	34.2	6.7	3.7	chr19	10586877	10587064	(48030552)	C	MIR	SINE/MIR	(13)	249	56	1820170
204	29.2	13.3	4.0	chr19	10888324	10888504	(47729112)	+	MIR1_Amn	SINE/MIR	33	224	(38)	1820934
16	8.5	0.0	0.0	chr19	10960669	10960693	(47656923)	+	(CCG)n	Simple_repeat	1	25	(0)	1821123
36	28.3	3.0	4.8	chr19	10960847	10961046	(47656570)	+	G-rich	Low_complexity	1	206	(0)	1821124
710	26.2	4.5	0.0	chr19	11143436	11143626	(47473990)	+	MER20	DNA/hAT-Charlie	20	219	(0)	1821559
1775	13.1	3.3	0.8	chr19	11382218	11382361	(47235255)	C	AluJo	SINE/Alu	(29)	283	137	1822182
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
635	25.7	4.6	0.5	chr19	12640510	12640696	(45976920)	+	AluJr	SINE/Alu	118	312	(0)	1824903
11	19.6	12.5	0.0	chr19	12657363	12657426	(45960190)	+	(CCTGTCC)n	Simple_repeat	1	72	(0)	1824940
2623	4.5	1.0	0.0	chr19	12657677	12657984	(45959632)	+	AluY	SINE/Alu	1	311	(0)	1824941
2492	6.1	1.3	0.6	chr19	12734856	12735166	(45882450)	C	AluSp	SINE/Alu	(0)	313	1	1825107
12	20.1	2.9	0.0	chr19	12769866	12769899	(45847717)	+	(CCG)n	Simple_repeat	1	35	(0)	1825181
12	21.1	0.0	4.8	chr19	12790135	12790176	(45827440)	+	(GCTGGAG)n	Simple_repeat	1	42	(0)	1825217
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
449	15.3	0.0	1.2	chr19	12885149	12885234	(45732382)	+	MER96	DNA/hAT-Tip100	3	87	(88)	1825449
12	17.2	2.2	6.5	chr19	13151788	13151832	(45465784)	+	(CCCGCCG)n	Simple_repeat	1	46	(0)	1825985
14	11.7	0.0	3.3	chr19	16572409	16572445	(42045171)	+	(GCGGG)n	Simple_repeat	1	35	(0)	1834225
23760	6.3	0.2	0.2	chr19	16961042	16964978	(41652638)	+	L1PA6	LINE/L1	2	3925	(2221)	1835168
2082	8.4	0.8	0.0	chr19	17394549	17394810	(41222806)	C	AluSq2	SINE/Alu	(48)	265	2	1836215
1078	8.7	0.0	0.0	chr19	17394822	17394959	(41222657)	C	FLAM_C	SINE/Alu	(5)	138	1	1836216
33	25.9	1.0	2.0	chr19	17395197	17395295	(41222321)	+	(CTCCTC)n	Simple_repeat	1	100	(0)	1836217
208	28.8	7.6	0.0	chr19	17395353	17395425	(41222191)	+	L2a	LINE/L2	2990	3068	(358)	1836218
14	19.1	6.2	4.3	chr19	17539743	17539807	(41077809)	+	(GCGTGAG)n	Simple_repeat	1	69	(0)	1836643
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
23	20.1	5.9	0.0	chr19	17719682	17719749	(40897867)	+	(CGG)n	Simple_repeat	1	72	(0)	1837104
760	23.5	0.7	0.0	chr19	17869114	17869262	(40748354)	C	AluJb	SINE/Alu	(40)	272	123	1837479
290	26.8	1.4	0.0	chr19	17869301	17869371	(40748245)	+	L2b	LINE/L2	3284	3355	(20)	1837478
17	15.3	2.6	0.0	chr19	18203591	18203628	(40413988)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	1838357
11	27.2	3.0	4.3	chr19	18203943	18204009	(40413607)	+	(TGGCGG)n	Simple_repeat	1	69	(0)	1838358
15	11.2	3.5	0.0	chr19	18203982	18204010	(40413606)	+	(GGC)n	Simple_repeat	1	30	(0)	1838359
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
255	0.0	0.0	0.0	chr19	18288250	18288280	(40329336)	C	MIR	SINE/MIR	(119)	143	113	1838544
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
22	8.6	0.0	2.6	chr19	18611652	18611690	(40005926)	+	(GGGAG)n	Simple_repeat	1	39	(0)	1839221
24	14.7	2.1	2.1	chr19	18790493	18790539	(39827077)	+	(CT)n	Simple_repeat	1	48	(0)	1839554
209	30.3	3.3	3.3	chr19	19191934	19192025	(39425591)	C	MIR3	SINE/MIR	(116)	92	1	1840465
227	35.5	4.2	3.7	chr19	19214940	19215103	(39402513)	+	MIR3	SINE/MIR	3	167	(41)	1840517
12	15.7	2.6	5.0	chr19	30373911	30373949	(28243667)	+	(CCCAGC)n	Simple_repeat	1	40	(0)	1851766
38	34.2	0.5	4.1	chr19	30375846	30376040	(28241576)	+	(TG)n	Simple_repeat	1	196	(0)	1851769
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
392	35.8	9.9	4.0	chr19	33272934	33273358	(25344258)	C	L2b	LINE/L2	(0)	3375	2923	1856519
12	12.0	0.0	6.5	chr19	33273562	33273592	(25344024)	+	(CTTGG)n	Simple_repeat	1	31	(0)	1856520
13	7.7	0.0	9.1	chr19	33521826	33521858	(25095758)	+	G-rich	Low_complexity	1	33	(0)	1856870
325	26.2	10.5	0.7	chr19	33767821	33767966	(24849650)	+	MamRep1879	DNA/hAT-Tip100?	51	212	(4)	1857283
222	31.6	11.4	4.1	chr19	33778034	33778155	(24839461)	C	MIR	SINE/MIR	(117)	145	14	1857292
1760	18.4	0.0	0.3	chr19	33883364	33883645	(24733971)	C	AluJr	SINE/Alu	(30)	282	2	1857481
247	26.2	0.0	5.8	chr19	33883728	33883796	(24733820)	C	MIRb	SINE/MIR	(26)	242	178	1857482
190	22.7	5.7	4.3	chr19	33883817	33883885	(24733731)	C	MIR	SINE/MIR	(165)	97	28	1857482
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
825	13.7	0.0	0.8	chr19	34404033	34404156	(24213460)	+	FLAM_C	SINE/Alu	11	133	(10)	1858560
423	20.0	0.0	0.0	chr19	34404168	34404242	(24213374)	C	L1MC5a	LINE/L1	(635)	2142	2068	1858561
13	20.4	0.0	4.7	chr19	34428369	34428411	(24189205)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	1858626
16	22.1	2.9	5.6	chr19	34428444	34428513	(24189103)	+	G-rich	Low_complexity	1	72	(0)	1858627
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
992	25.9	12.2	3.9	chr19	34998637	34999371	(23618245)	C	L2b	LINE/L2	(115)	3260	2454	1859478
243	31.6	6.5	2.0	chr19	34999501	34999657	(23617959)	+	MIRb	SINE/MIR	8	168	(100)	1859479
13	13.1	2.0	9.6	chr19	35040740	35040790	(23576826)	+	G-rich	Low_complexity	1	52	(0)	1859571
574	24.5	17.3	0.0	chr19	35247509	35247821	(23369795)	C	L2a	LINE/L2	(241)	3185	2797	1860019
1949	13.6	0.3	1.7	chr19	35532946	35533247	(23084369)	+	AluJo	SINE/Alu	1	298	(14)	1860611
11	20.8	0.0	2.9	chr19	35533593	35533627	(23083989)	+	G-rich	Low_complexity	1	35	(0)	1860612
12	14.6	0.0	5.9	chr19	35545823	35545856	(23071760)	+	G-rich	Low_complexity	1	34	(0)	1860636
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
54	42.6	0.3	0.0	chr19	36245991	36246274	(22371342)	+	(GT)n	Simple_repeat	1	285	(0)	1862217
13	14.0	0.0	5.7	chr19	36605285	36605319	(22012297)	+	(GCGCAG)n	Simple_repeat	1	35	(0)	1862876
41	2.6	0.0	0.0	chr19	36838107	36838146	(21779470)	+	(CA)n	Simple_repeat	1	40	(0)	1863352
21	19.9	2.2	0.0	chr19	37906671	37906716	(20710900)	+	(CG)n	Simple_repeat	1	47	(0)	1865341
747	28.5	6.0	7.1	chr19	38019144	38019589	(20598027)	C	MLT1J	LTR/ERVL-MaLR	(19)	493	15	1865632
15	0.0	0.0	0.0	chr19	38305313	38305331	(20312285)	+	(CAG)n	Simple_repeat	1	19	(0)	1866352
12	4.1	3.5	6.7	chr19	38402967	38402995	(20214621)	+	(GGGGC)n	Simple_repeat	1	30	(0)	1866578
891	13.1	1.5	0.0	chr19	38619481	38619610	(19998006)	+	FLAM_C	SINE/Alu	2	133	(10)	1867102
14	27.6	1.7	3.3	chr19	38870110	38870169	(19747447)	+	(GCC)n	Simple_repeat	1	61	(0)	1867628
12	15.2	5.0	7.9	chr19	38949903	38949962	(19667654)	+	(CCCGGC)n	Simple_repeat	1	63	(0)	1867815
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
270	31.2	7.9	5.5	chr19	40348058	40348271	(18269345)	C	MIRb	SINE/MIR	(0)	268	37	1870836
13	9.8	9.1	0.0	chr19	40444351	40444383	(18173233)	+	(AGCCGCG)n	Simple_repeat	1	36	(0)	1871078
725	20.8	6.4	10.7	chr19	40512230	40512509	(18105107)	C	L2b	LINE/L2	(2)	3373	3107	1871281
448	27.1	16.4	0.0	chr19	40553842	40554029	(18063587)	+	MIR	SINE/MIR	15	239	(23)	1871399
27	5.5	0.0	0.0	chr19	40597140	40597177	(18020439)	+	(GGGCGG)n	Simple_repeat	1	38	(0)	1871496
2211	8.7	2.0	0.0	chr19	40662554	40662841	(17954775)	C	AluSx1	SINE/Alu	(17)	295	2	1871650
1655	13.0	0.0	3.2	chr19	41189324	41189418	(17428198)	C	AluSx	SINE/Alu	(173)	139	45	1872830
651	25.9	3.2	8.8	chr19	41189553	41189814	(17427802)	C	L2	LINE/L2	(610)	2809	2563	1872832
22	18.4	0.0	2.0	chr19	41193287	41193337	(17424279)	+	(CGCTGC)n	Simple_repeat	1	51	(0)	1872844
17	15.6	2.1	4.2	chr19	42133305	42133351	(16484265)	+	(CCCCT)n	Simple_repeat	1	48	(0)	1874651
647	30.0	10.5	5.1	chr19	42140487	42140837	(16476779)	+	L2b	LINE/L2	3004	3375	(0)	1874665
14	25.9	1.9	1.9	chr19	42397477	42397528	(16220088)	+	(TCAC)n	Simple_repeat	1	53	(0)	1875198
439	30.8	12.7	3.5	chr19	42397531	42397974	(16219642)	C	L2b	LINE/L2	(4)	3383	2910	1875199
528	25.7	11.0	1.9	chr19	43475567	43475780	(15141836)	+	MIR	SINE/MIR	14	249	(13)	1876864
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
15	4.7	0.0	0.0	chr19	45152511	45152532	(13465084)	+	(CTG)n	Simple_repeat	1	22	(0)	1880570
219	32.5	5.0	2.6	chr19	45496196	45496312	(13121304)	C	MIR3	SINE/MIR	(62)	146	27	1881466
12	13.3	2.7	5.3	chr19	45498864	45498900	(13118716)	+	(GCGAGC)n	Simple_repeat	1	38	(0)	1881472
14	17.6	2.5	2.4	chr19	45553628	45553667	(13063949)	+	(CGCCTG)n	Simple_repeat	1	41	(0)	1881619
685	28.1	0.8	7.8	chr19	45585170	45585427	(13032189)	+	MIR	SINE/MIR	10	249	(13)	1881709
12	18.3	0.0	3.0	chr19	45770724	45770756	(12846860)	+	(CCCGCC)n	Simple_repeat	1	33	(0)	1882223
11	20.6	2.9	0.0	chr19	45999954	45999987	(12617629)	+	(GAGGCA)n	Simple_repeat	1	35	(0)	1882798
11	20.5	5.1	0.0	chr19	46000055	46000093	(12617523)	+	G-rich	Low_complexity	1	41	(0)	1882799
2411	9.2	0.0	1.3	chr19	46271148	46271462	(12346154)	+	AluSc8	SINE/Alu	1	311	(0)	1883248
659	27.3	13.8	8.4	chr19	46271463	46271476	(12346140)	+	ERV3-16A3_LTR	LTR/ERVL	49	49	(373)	1883247
1957	13.3	5.2	2.4	chr19	46271477	46271846	(12345770)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1883249
659	27.3	13.8	8.4	chr19	46271847	46272085	(12345531)	+	ERV3-16A3_LTR	LTR/ERVL	49	330	(92)	1883247
343	27.8	13.5	4.8	chr19	46372975	46373182	(12244434)	C	MIRb	SINE/MIR	(39)	229	1	1883503
467	27.0	13.1	5.4	chr19	46373255	46373493	(12244123)	+	MIRb	SINE/MIR	9	268	(0)	1883504
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
1089	22.9	3.1	2.8	chr19	46429096	46429446	(12188170)	+	L1MC4	LINE/L1	6820	7337	(705)	1883635
17	18.7	3.3	4.8	chr19	47113141	47113200	(11504416)	+	(GAGGCG)n	Simple_repeat	1	62	(0)	1885281
12	21.8	2.7	0.0	chr19	47113254	47113290	(11504326)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	1885281
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
69	0.0	1.6	0.0	chr19	47849623	47849684	(10767932)	+	(AG)n	Simple_repeat	1	63	(0)	1887235
935	18.1	0.6	0.0	chr19	47849932	47850091	(10767525)	+	AluJo	SINE/Alu	140	300	(12)	1887236
2271	11.7	0.3	0.0	chr19	48062329	48062636	(10554980)	+	AluSx1	SINE/Alu	1	309	(3)	1887840
2410	4.0	1.7	2.4	chr19	48782123	48782420	(9835196)	C	AluY	SINE/Alu	(15)	296	1	1889587
64	0.0	0.0	0.0	chr19	48782777	48782833	(9834783)	+	(TTAT)n	Simple_repeat	1	57	(0)	1889588
1987	11.3	5.5	0.0	chr19	49478491	49478765	(9138851)	+	AluSx1	SINE/Alu	1	291	(21)	1891178
15	12.0	0.0	0.0	chr19	50205295	50205321	(8412295)	+	(GCC)n	Simple_repeat	1	27	(0)	1892967
402	21.8	0.8	4.3	chr19	50205599	50205868	(8411748)	C	MSR1	Satellite	(0)	260	1	1892968
19	0.0	0.0	0.0	chr19	50607990	50608010	(8009606)	+	(A)n	Simple_repeat	1	21	(0)	1893906
13	19.5	2.9	0.0	chr19	50695970	50696004	(7921612)	+	(GCACA)n	Simple_repeat	1	36	(0)	1894113
320	18.0	4.7	0.0	chr19	51608434	51608494	(7009122)	C	MER5A1	DNA/hAT-Charlie	(101)	65	2	1895889
283	27.9	4.4	1.5	chr19	51608541	51608671	(7008945)	C	MIR	SINE/MIR	(11)	251	117	1895890
673	14.1	1.2	2.0	chr19	51704496	51705028	(6912588)	+	MSR1	Satellite	1	528	(2)	1896078
13	11.2	3.2	3.1	chr19	51719643	51719673	(6897943)	+	(GCC)n	Simple_repeat	1	32	(0)	1896112
12	19.6	0.0	5.1	chr19	52190438	52190476	(6427140)	+	(GGCTGG)n	Simple_repeat	1	39	(0)	1896965
479	29.4	7.4	4.8	chr19	52716499	52716600	(5901016)	C	L2a	LINE/L2	(92)	3283	3174	1898032
2192	13.3	13.8	4.2	chr19	52716601	52716780	(5900836)	+	MER4A1	LTR/ERV1	1	178	(294)	1898033
1709	14.5	8.2	0.0	chr19	52716781	52717049	(5900567)	+	AluSz	SINE/Alu	7	299	(13)	1898034
265	22.7	2.3	0.0	chr19	53394548	53394657	(5222959)	C	FRAM	SINE/Alu	(17)	116	4	1899262
189	20.0	16.7	0.0	chr19	53520507	53520551	(5097065)	C	OldhAT1	DNA/hAT-Ac	(929)	1919	1866	1899507
34	0.0	0.0	0.0	chr19	53980058	53980086	(4637530)	+	(GT)n	Simple_repeat	1	29	(0)	1900731
15	23.2	0.0	0.0	chr19	53980087	53980114	(4637502)	+	(GC)n	Simple_repeat	1	28	(0)	1900732
604	25.8	10.3	12.2	chr19	54024188	54024263	(4593353)	C	MLT1G	LTR/ERVL-MaLR	(0)	555	490	1900860
650	12.5	1.6	0.5	chr19	54095477	54095856	(4521760)	C	MSR1	Satellite	(8)	384	1	1901066
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
1039	13.7	1.1	3.3	chr19	55005934	55006005	(3611611)	+	AluSx	SINE/Alu	237	306	(6)	1902776
14	17.7	0.0	0.0	chr19	55161022	55161053	(3456563)	+	(CCCCAG)n	Simple_repeat	1	32	(0)	1903122
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
21	26.2	1.3	2.6	chr19	55654889	55654964	(2962652)	+	G-rich	Low_complexity	1	77	(0)	1904236
187	14.4	7.0	0.4	chr19	57499312	57499737	(1117879)	+	(CTCCAT)n	Simple_repeat	1	456	(0)	1907898
1079	20.2	6.1	9.5	chr19	57830622	57830742	(786874)	C	LTR62	LTR/ERVL	(393)	316	183	1908401
17	18.7	6.2	6.8	chr19	58305442	58305538	(312078)	+	(AGTGGTG)n	Simple_repeat	1	103	(0)	1909308
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
564	25.6	0.7	0.0	chr19	58543719	58543855	(73761)	C	AluJb	SINE/Alu	(39)	273	136	1909717
183	16.2	3.7	0.5	chr2	955922	956303	(241237226)	+	(CTGCCC)n	Simple_repeat	1	396	(0)	1911761
27	3.5	0.0	0.0	chr2	1306605	1306634	(240886895)	+	(AGGACTG)n	Simple_repeat	1	30	(0)	1912090
31	3.3	0.0	0.0	chr2	1306680	1306710	(240886819)	+	(GT)n	Simple_repeat	1	31	(0)	1912091
90	25.8	3.1	4.5	chr2	1306905	1307381	(240886148)	+	(TG)n	Simple_repeat	1	470	(0)	1912092
450	18.1	6.8	1.6	chr2	2572350	2573626	(239619903)	+	(CA)n	Simple_repeat	1	1364	(0)	1913432
370	35.5	7.8	2.7	chr2	8397637	8398012	(233795517)	+	L2b	LINE/L2	2430	2826	(593)	1921325
12	22.2	0.0	7.4	chr2	8685541	8685594	(233507935)	+	(CCCCGG)n	Simple_repeat	1	54	(0)	1921733
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
2537	6.2	0.0	0.7	chr2	10690133	10690440	(231503089)	+	AluSx1	SINE/Alu	2	307	(5)	1925242
244	26.1	6.1	3.2	chr2	10911341	10911435	(231282094)	+	MIR3	SINE/MIR	16	113	(95)	1925715
14	30.3	0.0	1.9	chr2	10911767	10911820	(231281709)	+	(GCG)n	Simple_repeat	1	54	(0)	1925716
322	17.9	1.5	0.0	chr2	11130300	11130366	(231063163)	C	MIR3	SINE/MIR	(108)	100	33	1926075
1243	20.9	16.0	1.6	chr2	11403830	11404266	(230789263)	+	LTR33	LTR/ERVL	4	515	(0)	1926575
12	6.6	12.5	0.0	chr2	14634375	14634406	(227559123)	+	(GCCCGC)n	Simple_repeat	1	36	(0)	1931491
297	23.8	12.3	1.2	chr2	15748814	15748931	(226444598)	+	MIR	SINE/MIR	54	182	(80)	1933239
187	34.2	8.5	3.6	chr2	15808394	15808560	(226384969)	C	L2c	LINE/L2	(285)	3090	2915	1933344
13	16.9	0.0	8.5	chr2	17538994	17539040	(224654489)	+	(CCGCGCT)n	Simple_repeat	1	47	(0)	1936102
17	12.3	0.0	5.1	chr2	19358658	19358744	(222834785)	+	(CCACCC)n	Simple_repeat	1	82	(0)	1938707
17	10.4	7.0	2.2	chr2	19358710	19358752	(222834777)	+	(CCTGC)n	Simple_repeat	1	46	(0)	1938708
5336	12.1	13.0	9.7	chr2	20105982	20107080	(222086449)	C	LTR12D	LTR/ERV1	(113)	1141	1	1939766
2337	9.8	0.0	0.3	chr2	20107173	20107478	(222086051)	+	AluSc8	SINE/Alu	1	305	(6)	1939767
14	10.3	3.0	2.9	chr2	20651130	20651162	(221542367)	+	(CCCTG)n	Simple_repeat	1	34	(0)	1940695
12	13.9	0.0	0.0	chr2	23674686	23674709	(218518820)	+	(ACCC)n	Simple_repeat	1	24	(0)	1944681
12	4.8	4.5	0.0	chr2	24049519	24049540	(218143989)	+	(ATGG)n	Simple_repeat	1	23	(0)	1945411
15	26.3	2.7	4.0	chr2	24049632	24049704	(218143825)	+	(GCCCC)n	Simple_repeat	1	75	(0)	1945412
13	20.0	0.0	9.7	chr2	24049746	24049807	(218143722)	+	(GGCGG)n	Simple_repeat	1	62	(0)	1945413
14	28.4	1.3	5.0	chr2	25216226	25216304	(216977225)	+	(GGCGCCC)n	Simple_repeat	1	80	(0)	1947541
13	22.7	0.0	0.0	chr2	25342311	25342346	(216851183)	+	G-rich	Low_complexity	1	36	(0)	1947760
504	26.3	4.3	1.9	chr2	25342754	25342912	(216850617)	+	L3	LINE/CR1	3929	4091	(8)	1947761
12	18.9	7.1	0.0	chr2	26184741	26184782	(216008747)	+	(CGCTGG)n	Simple_repeat	1	45	(0)	1949502
18	11.6	0.0	4.9	chr2	27032889	27032929	(215160600)	+	G-rich	Low_complexity	1	41	(0)	1951084
16	19.6	0.0	4.4	chr2	27033067	27033111	(215160418)	+	(CGG)n	Simple_repeat	1	45	(0)	1951085
354	25.5	15.2	1.6	chr2	27033254	27033456	(215160073)	C	MIR3	SINE/MIR	(39)	229	1	1951086
17	7.0	3.3	0.0	chr2	27071533	27071562	(215121967)	+	(CCACGG)n	Simple_repeat	1	31	(0)	1951129
16	22.3	4.0	5.1	chr2	27071773	27071847	(215121682)	+	(GGCTGG)n	Simple_repeat	1	78	(0)	1951130
2216	7.3	0.0	2.4	chr2	27119557	27119844	(215073685)	+	AluY	SINE/Alu	1	281	(30)	1951209
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
19	3.8	0.0	0.0	chr2	27264339	27264365	(214929164)	+	(AACAA)n	Simple_repeat	1	27	(0)	1951463
14	31.9	0.0	0.0	chr2	27442515	27442568	(214750961)	+	(CCCGC)n	Simple_repeat	1	54	(0)	1951833
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
25	27.4	4.2	0.0	chr2	28392892	28392933	(213800596)	+	(CGAG)n	Simple_repeat	1	71	(29)	1953485
23	11.2	0.0	0.0	chr2	28392934	28392972	(213800557)	+	(GAGAGA)n	Simple_repeat	1	39	(0)	1953486
25	27.4	4.2	0.0	chr2	28392973	28392987	(213800542)	+	(CGAG)n	Simple_repeat	72	100	(0)	1953485
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
14	27.9	2.7	4.0	chr2	28810646	28810719	(213382810)	+	(GCGG)n	Simple_repeat	1	76	(0)	1954258
332	32.0	6.2	5.1	chr2	28811152	28811309	(213382220)	+	L1M4b	LINE/L1	458	617	(6250)	1954259
13	32.4	2.9	0.0	chr2	29294144	29294212	(212899317)	+	(CTTTCTC)n	Simple_repeat	1	71	(0)	1955070
15	11.2	0.0	3.2	chr2	31138684	31138714	(211054815)	+	(GGGGC)n	Simple_repeat	1	31	(0)	1958027
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
12	21.7	0.0	0.0	chr2	32039562	32039593	(210153936)	+	(CCCCGA)n	Simple_repeat	1	32	(0)	1959375
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
531	33.6	8.8	5.0	chr2	36597200	36597537	(205595992)	+	L2c	LINE/L2	3036	3387	(0)	1966233
35	0.0	0.0	0.0	chr2	36966899	36966928	(205226601)	+	(AC)n	Simple_repeat	1	30	(0)	1966853
31	0.0	0.0	0.0	chr2	37156911	37156939	(205036590)	+	(CGC)n	Simple_repeat	1	29	(0)	1967231
12	26.7	4.1	0.0	chr2	37157099	37157147	(205036382)	+	(GGCG)n	Simple_repeat	1	51	(0)	1967232
21	23.0	4.1	1.3	chr2	37671684	37671756	(204521773)	+	(GCGGC)n	Simple_repeat	1	76	(0)	1968080
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
602	29.1	3.1	0.5	chr2	39605535	39605724	(202587805)	+	MER117	DNA/hAT-Charlie	2	196	(1)	1971488
2341	14.3	13.3	2.0	chr2	39646956	39647449	(202546080)	C	MER74A	LTR/ERVL	(0)	558	1	1971560
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
13	5.2	0.0	0.0	chr2	41837023	41837042	(200356487)	+	(TGG)n	Simple_repeat	1	20	(0)	1974493
487	30.4	1.9	1.2	chr2	41837187	41837346	(200356183)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1974494
41	8.2	0.0	0.0	chr2	41937460	41937512	(200256017)	+	(AC)n	Simple_repeat	1	53	(0)	1974671
28	0.0	3.3	0.0	chr2	42810107	42810136	(199383393)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1976361
359	28.3	3.1	2.3	chr2	42931562	42931691	(199261838)	C	MER5A1	DNA/hAT-Charlie	(35)	131	1	1976565
14	23.1	1.9	3.6	chr2	42931740	42931793	(199261736)	+	(CTGCCT)n	Simple_repeat	1	55	(0)	1976566
252	19.7	0.0	4.7	chr2	43127527	43127590	(199065939)	C	MIRc	SINE/MIR	(92)	176	116	1976929
286	23.4	1.5	0.0	chr2	46229292	46229355	(195964174)	C	MamTip2	DNA/hAT-Tip100	(196)	109	45	1981926
227	27.0	7.4	5.7	chr2	46229613	46229718	(195963811)	+	Charlie30a	DNA/hAT-Charlie	105	212	(579)	1981927
15	24.1	0.0	0.0	chr2	46229808	46229841	(195963688)	+	(TC)n	Simple_repeat	1	34	(0)	1981928
15	18.6	2.1	4.2	chr2	46229926	46229972	(195963557)	+	(CTCC)n	Simple_repeat	1	48	(0)	1981929
418	25.0	1.6	2.4	chr2	46500543	46500669	(195692860)	+	L1ME4a	LINE/L1	5563	5688	(436)	1982356
203	31.5	1.1	5.3	chr2	46780798	46780891	(195412638)	C	MIRc	SINE/MIR	(33)	235	146	1982791
14	7.8	3.7	0.0	chr2	47369093	47369119	(194824410)	+	(GGGGC)n	Simple_repeat	1	28	(0)	1983925
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
24	12.3	2.3	0.0	chr2	48440801	48440844	(193752685)	+	(GGC)n	Simple_repeat	1	45	(0)	1985972
12	16.5	0.0	0.0	chr2	48585745	48585771	(193607758)	+	(AGGC)n	Simple_repeat	1	27	(0)	1986264
24	15.1	0.0	0.0	chr2	48755608	48755651	(193437878)	+	(GCA)n	Simple_repeat	1	44	(0)	1986495
13	21.2	2.1	4.2	chr2	48755755	48755801	(193437728)	+	(CTGCC)n	Simple_repeat	1	48	(0)	1986496
356	38.6	5.2	5.7	chr2	50225345	50225712	(191967817)	C	L2c	LINE/L2	(18)	3369	3004	1988481
38	16.8	4.6	0.0	chr2	51032140	51032226	(191161303)	+	GA-rich	Low_complexity	1	91	(0)	1989561
268	22.1	19.9	5.0	chr2	53641683	53641801	(188551728)	C	MIR	SINE/MIR	(99)	163	23	1992899
19	16.7	7.4	0.0	chr2	53971071	53971124	(188222405)	+	(CGG)n	Simple_repeat	1	58	(0)	1993470
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
7884	17.8	10.1	7.8	chr2	54708540	54710604	(187482925)	+	MER52D	LTR/ERV1	4	2122	(1)	1994715
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
2175	7.0	7.1	0.0	chr2	55519117	55519403	(186674126)	C	AluSx	SINE/Alu	(0)	312	4	1996064
2042	18.1	12.8	4.1	chr2	56182330	56182796	(186010733)	C	MER67D	LTR/ERV1	(0)	514	1	1997103
195	35.3	6.1	5.0	chr2	58447859	58448216	(183745313)	+	L2c	LINE/L2	2488	2849	(570)	1999794
480	33.7	12.3	0.3	chr2	58448198	58448489	(183745040)	+	L2c	LINE/L2	3056	3387	(0)	1999794
371	35.0	7.9	5.9	chr2	58497287	58497685	(183695844)	+	L2b	LINE/L2	2977	3375	(0)	1999873
27	0.0	0.0	0.0	chr2	60553483	60553511	(181640018)	+	(A)n	Simple_repeat	1	29	(0)	2002583
35	6.6	2.1	0.0	chr2	60553511	60553558	(181639971)	+	(AG)n	Simple_repeat	1	49	(0)	2002584
3035	20.0	8.5	2.4	chr2	62072158	62073064	(180120465)	+	LTR2752	LTR/ERV1	1	1696	(59)	2005791
2598	17.1	5.5	8.5	chr2	62073121	62073697	(180119832)	+	MER4D	LTR/ERV1	306	864	(39)	2005790
896	15.1	1.4	2.7	chr2	65049196	65049345	(177144184)	C	LTR72B	LTR/ERV1	(0)	500	353	2010480
2200	13.6	3.4	0.9	chr2	65049333	65049681	(177143848)	C	LTR45B	LTR/ERV1	(131)	358	1	2010481
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
320	23.5	8.4	2.0	chr2	70190408	70190507	(172003022)	C	MIRb	SINE/MIR	(43)	225	119	2018609
25	7.2	4.5	0.0	chr2	70766944	70766987	(171426542)	+	(TTTTCTA)n	Simple_repeat	1	46	(0)	2019579
12	11.6	3.3	3.2	chr2	70767200	70767229	(171426300)	+	G-rich	Low_complexity	1	31	(0)	2019580
12	17.6	3.1	0.0	chr2	70767439	70767470	(171426059)	+	(CGCCC)n	Simple_repeat	1	33	(0)	2019581
21	28.1	3.4	1.1	chr2	70767477	70767490	(171426039)	+	(GAGGC)n	Simple_repeat	1	26	(65)	2019582
22	10.5	2.3	2.2	chr2	70767491	70767534	(171425995)	+	G-rich	Low_complexity	1	45	(0)	2019583
21	28.1	3.4	1.1	chr2	70767535	70767565	(171425964)	+	(GAGGC)n	Simple_repeat	27	91	(0)	2019582
16	25.6	0.0	3.4	chr2	70790575	70790633	(171402896)	+	G-rich	Low_complexity	1	59	(0)	2019614
24	17.1	4.3	2.8	chr2	70994826	70994894	(171198635)	+	(GCC)n	Simple_repeat	1	72	(0)	2019949
18	25.4	1.8	0.0	chr2	73269059	73269125	(168924404)	+	G-rich	Low_complexity	1	68	(0)	2023421
13	8.3	0.0	6.7	chr2	74648174	74648203	(167545326)	+	(GCCCA)n	Simple_repeat	1	30	(0)	2025726
12	18.1	2.4	4.8	chr2	74715401	74715441	(167478088)	+	(CGCGG)n	Simple_repeat	1	42	(0)	2025835
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
19634	9.4	0.8	4.7	chr2	77088677	77091793	(165101736)	+	HERVH-int	LTR/ERV1	1	2995	(4718)	2029184
209	31.0	13.7	1.7	chr2	79512185	79512299	(162681230)	+	L2a	LINE/L2	3295	3425	(1)	2032399
2059	11.4	4.3	0.0	chr2	84926401	84926690	(157266839)	C	AluSx1	SINE/Alu	(9)	303	1	2039690
1881	23.4	6.4	4.0	chr2	85064836	85065413	(157128116)	+	LTR75B	LTR/ERVL	4	596	(12)	2040035
12	7.4	10.3	0.0	chr2	85611846	85611874	(156581655)	+	(GGC)n	Simple_repeat	1	32	(0)	2041125
34	2.8	0.0	0.0	chr2	88452165	88452201	(153741328)	+	(GCGGGCGCG)n	Simple_repeat	1	37	(0)	2046042
21	0.0	0.0	0.0	chr2	96148922	96148944	(146044585)	+	(GT)n	Simple_repeat	1	23	(0)	2051622
11	11.3	6.9	0.0	chr2	96148944	96148972	(146044557)	+	(GACCAG)n	Simple_repeat	1	31	(0)	2051623
240	16.3	0.0	0.0	chr2	96335614	96335656	(145857873)	C	Charlie4z	DNA/hAT-Charlie	(96)	71	29	2051963
15	8.2	4.3	4.3	chr2	96335904	96335939	(145857590)	+	G-rich	Low_complexity	1	36	(0)	2051964
14	20.0	2.4	2.3	chr2	96335988	96336029	(145857500)	+	G-rich	Low_complexity	1	43	(0)	2051964
254	18.3	8.9	4.7	chr2	96407669	96407754	(145785775)	+	MIR3	SINE/MIR	65	154	(54)	2052094
18	18.6	0.0	5.6	chr2	101252681	101252734	(140940795)	+	(CGCCC)n	Simple_repeat	1	54	(0)	2059271
13	19.6	7.4	1.7	chr2	102619492	102619545	(139573984)	+	(GCGCC)n	Simple_repeat	1	58	(0)	2061316
300	16.4	4.3	5.6	chr2	102619870	102619940	(139573589)	C	L1MD2	LINE/L1	(6069)	478	409	2061317
13	20.1	0.0	2.8	chr2	104873433	104873468	(137320061)	+	(GCCCG)n	Simple_repeat	1	36	(0)	2064084
16	6.9	6.5	0.0	chr2	104873528	104873558	(137319971)	+	(CACTCA)n	Simple_repeat	1	33	(0)	2064085
13	18.4	7.0	0.0	chr2	106065663	106065705	(136127824)	+	(CCCGCG)n	Simple_repeat	1	46	(0)	2065865
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
334	17.9	3.6	0.9	chr2	109614414	109614520	(132579009)	+	MER52D	LTR/ERV1	373	482	(1641)	2070959
3021	20.0	5.4	6.5	chr2	110167110	110167916	(132025613)	+	MER21C	LTR/ERVL	9	898	(40)	2071835
37	33.6	0.0	2.8	chr2	110838227	110838368	(131355161)	+	(TG)n	Simple_repeat	1	142	(0)	2072780
180	28.5	8.9	3.1	chr2	112181575	112181701	(130011828)	+	L2b	LINE/L2	3213	3347	(28)	2074679
16	19.5	3.6	3.5	chr2	113756650	113756705	(128436824)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	2077268
13	21.9	1.8	7.0	chr2	113756846	113756901	(128436628)	+	GA-rich	Low_complexity	1	57	(0)	2077269
2203	21.2	4.0	1.3	chr2	116754307	116754840	(125438689)	+	MER61-int	LTR/ERV1	1	549	(4668)	2081427
29	0.0	0.0	0.0	chr2	118014107	118014133	(124179396)	+	(GCC)n	Simple_repeat	1	27	(0)	2083040
484	24.4	14.4	2.5	chr2	119476397	119476640	(122716889)	+	MamGypLTR3	LTR/Gypsy	597	874	(20)	2085420
341	24.9	18.0	0.6	chr2	120443232	120443405	(121750124)	+	MIR	SINE/MIR	38	248	(14)	2086976
4281	19.2	11.4	2.2	chr2	120756777	120757981	(121435548)	C	L1ME1	LINE/L1	(5038)	1362	34	2087520
838	30.7	10.5	4.6	chr2	121073929	121074496	(121119033)	C	MLT2F	LTR/ERVL	(58)	605	1	2088002
239	32.6	9.1	3.1	chr2	121076032	121076407	(121117122)	+	L2c	LINE/L2	2972	3368	(7)	2088003
44	2.3	0.0	0.0	chr2	122532118	122532162	(119661367)	+	(TTAT)n	Simple_repeat	1	45	(0)	2090546
308	15.1	6.4	1.4	chr2	122532174	122532247	(119661282)	C	L1MA9	LINE/L1	(34)	6278	6201	2090547
3221	13.4	4.2	2.0	chr2	122999460	123000000	(119193529)	+	LTR8	LTR/ERV1	1	553	(138)	2091203
872	16.7	0.0	0.7	chr2	123000001	123000139	(119193390)	+	LTR8	LTR/ERV1	554	691	(0)	2091204
15	19.3	4.1	2.0	chr2	127387975	127388023	(114805506)	+	(CGTCGCG)n	Simple_repeat	1	51	(0)	2097357
14	22.5	0.0	2.3	chr2	127422815	127422857	(114770672)	+	(CCCTC)n	Simple_repeat	1	43	(0)	2097417
14	13.2	2.9	2.8	chr2	127423201	127423235	(114770294)	+	(GGCGG)n	Simple_repeat	1	36	(0)	2097418
258	18.8	5.4	1.9	chr2	129759453	129760141	(112433388)	+	(CA)n	Simple_repeat	1	726	(0)	2100825
15	18.6	0.0	6.2	chr2	129827421	129827426	(112366103)	+	(GCGG)n	Simple_repeat	1	44	(0)	2100930
13	24.8	0.0	0.0	chr2	129827427	129827464	(112366065)	+	(GGAGCG)n	Simple_repeat	1	38	(0)	2100931
184	39.2	3.2	6.7	chr2	129827775	129827938	(112365591)	C	L2	LINE/L2	(576)	2843	2686	2100932
20	20.1	2.5	9.9	chr2	130836822	130836939	(111356590)	+	G-rich	Low_complexity	1	121	(0)	2102408
11	21.6	0.0	4.9	chr2	132489403	132489443	(109704086)	+	G-rich	Low_complexity	1	41	(0)	2104663
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
516	26.5	10.0	4.4	chr2	136527869	136528093	(105665436)	+	MIR	SINE/MIR	14	252	(10)	2110842
1204	20.9	9.9	3.3	chr2	148813727	148814121	(93379408)	+	MER74A	LTR/ERVL	62	485	(73)	2127179
14	14.9	5.4	0.0	chr2	148875178	148875214	(93318315)	+	G-rich	Low_complexity	1	39	(0)	2127292
17	16.1	3.9	3.7	chr2	148875338	148875389	(93318140)	+	G-rich	Low_complexity	1	54	(0)	2127293
33	0.0	2.9	0.0	chr2	152336089	152336123	(89857406)	+	(AAAAC)n	Simple_repeat	1	36	(0)	2132281
12	15.1	8.1	0.0	chr2	152336189	152336225	(89857304)	+	G-rich	Low_complexity	1	40	(0)	2132282
14	16.9	3.0	0.0	chr2	153478867	153478899	(88714630)	+	(GGC)n	Simple_repeat	1	34	(0)	2133771
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
14	11.9	8.1	0.0	chr2	162344146	162344182	(79849347)	+	(CCTGCA)n	Simple_repeat	1	40	(0)	2145594
15	17.9	0.0	4.8	chr2	165794145	165794186	(76399343)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	2150134
10351	19.8	7.3	3.5	chr2	167330609	167332272	(74861257)	C	L1MA4A	LINE/L1	(4898)	1951	190	2152065
3509	18.5	2.9	1.6	chr2	167406277	167406953	(74786576)	+	L1MA4	LINE/L1	2	687	(4641)	2152163
9711	16.2	3.9	2.4	chr2	167406954	167408015	(74785514)	+	L1MA4	LINE/L1	2782	3870	(2455)	2152163
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
2129	20.9	6.3	2.5	chr2	168550478	168550822	(73642707)	C	MER45C	DNA/hAT-Tip100	(145)	808	441	2153729
976	20.2	1.0	2.0	chr2	168550983	168551184	(73642345)	C	MER45C	DNA/hAT-Tip100	(738)	215	16	2153729
695	9.2	16.4	6.9	chr2	169789666	169789796	(72403733)	C	AluJr	SINE/Alu	(166)	146	1	2155604
620	16.1	11.8	0.0	chr2	169789813	169789961	(72403568)	+	L1ME3	LINE/L1	5320	5488	(674)	2155603
25073	6.6	0.5	0.4	chr2	172264706	172270864	(69922665)	C	L1PA6	LINE/L1	(1)	6153	6	2159896
2094	12.9	1.2	7.6	chr2	172270865	172271233	(69922296)	C	LTR9	LTR/ERV1	(267)	345	1	2159895
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
196	28.6	6.7	3.9	chr2	174771891	174771992	(67421537)	+	L2	LINE/L2	65	169	(3250)	2163820
23	15.6	3.2	4.6	chr2	175005224	175005286	(67188243)	+	(GGC)n	Simple_repeat	1	65	(0)	2164159
12	18.8	2.6	2.6	chr2	176490764	176490801	(65702728)	+	(GTGGCCG)n	Simple_repeat	1	39	(0)	2166216
19	18.0	4.4	4.2	chr2	179861414	179861481	(62332048)	+	(GCCCG)n	Simple_repeat	1	71	(0)	2170736
855	28.9	12.9	4.4	chr2	180196444	180196964	(61996565)	+	MLT1H1	LTR/ERVL-MaLR	1	547	(8)	2171192
25041	7.0	0.9	0.2	chr2	180585620	180591717	(61601812)	C	L1PA5	LINE/L1	(0)	6154	11	2171646
1606	24.2	6.4	1.3	chr2	180679734	180680130	(61513399)	+	ERV3-16A3_LTR	LTR/ERVL	2	420	(2)	2171768
5480	12.5	16.1	1.3	chr2	185006296	185007369	(57186160)	C	MER11A	LTR/ERVK	(0)	1266	3	2177228
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
3505	8.9	0.4	0.2	chr2	187510490	187510951	(54682578)	+	LTR2	LTR/ERV1	1	463	(0)	2180479
20462	12.2	4.9	4.1	chr2	187510952	187515862	(54677667)	+	Harlequin-int	LTR/ERV1	1	5069	(1827)	2180479
11201	10.5	0.1	1.6	chr2	188455658	188457258	(53736271)	+	THE1B-int	LTR/ERVL-MaLR	1	1576	(4)	2181675
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
395	21.9	10.4	4.2	chr2	191019976	191020190	(51173339)	+	L1ME4a	LINE/L1	5819	6048	(76)	2185240
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
13	15.0	9.1	3.3	chr2	196926746	196926800	(45266729)	+	(GCGCCT)n	Simple_repeat	1	60	(0)	2193089
12	22.4	0.0	2.6	chr2	199463510	199463547	(42729982)	+	G-rich	Low_complexity	1	38	(0)	2196853
969	20.9	0.0	0.0	chr2	200168732	200168894	(42024635)	C	MER5A1	DNA/hAT-Charlie	(3)	163	1	2197925
11	27.6	1.0	9.1	chr2	200509910	200509948	(41683581)	+	(CGGCCCG)n	Simple_repeat	3	99	(0)	2198447
20	11.8	0.0	2.6	chr2	200510168	200510206	(41683323)	+	(GCCAC)n	Simple_repeat	1	39	(0)	2198448
265	28.4	11.0	2.6	chr2	200510338	200510468	(41683061)	C	MIRc	SINE/MIR	(121)	147	6	2198449
260	28.9	11.7	1.6	chr2	200510509	200510631	(41682898)	C	MIRc	SINE/MIR	(19)	249	113	2198450
14	18.0	8.0	0.0	chr2	200526339	200526388	(41667141)	+	(TCCGGCC)n	Simple_repeat	1	54	(0)	2198471
13	20.5	0.0	4.7	chr2	201451406	201451448	(40742081)	+	(GCAGCC)n	Simple_repeat	1	43	(0)	2200073
462	22.4	6.7	2.3	chr2	201973420	201973547	(40219982)	+	MER63B	DNA/hAT-Blackjack	303	436	(0)	2200948
28	0.0	0.0	3.2	chr2	202033874	202033904	(40159625)	+	(CGG)n	Simple_repeat	1	31	(0)	2201079
24	24.3	1.8	6.3	chr2	202034104	202034219	(40159310)	+	(GCG)n	Simple_repeat	1	110	(0)	2201080
2370	7.8	0.0	3.1	chr2	202265464	202265588	(39927941)	+	AluSc	SINE/Alu	194	309	(0)	2201570
13	20.8	0.0	0.0	chr2	203328209	203328241	(38865288)	+	G-rich	Low_complexity	1	33	(0)	2203790
3779	21.2	12.2	0.7	chr2	203646250	203647247	(38546282)	C	LTR28C	LTR/ERV1	(0)	1129	1	2204393
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
21	19.8	0.0	0.0	chr2	205682634	205682679	(36510850)	+	(CAG)n	Simple_repeat	1	46	(0)	2207283
12	19.3	4.7	2.2	chr2	205686012	205686054	(36507475)	+	(CCCCT)n	Simple_repeat	1	45	(0)	2207286
188	28.9	0.0	0.0	chr2	205764451	205764495	(36429034)	C	MIR	SINE/MIR	(111)	151	107	2207380
506	29.8	2.6	2.9	chr2	205764785	205764971	(36428558)	+	L2c	LINE/L2	3176	3387	(0)	2207381
14	18.8	0.0	0.0	chr2	206274569	206274599	(35918930)	+	G-rich	Low_complexity	1	31	(0)	2208373
14	15.8	4.3	4.2	chr2	206274955	206275000	(35918529)	+	G-rich	Low_complexity	1	48	(0)	2208374
211	30.1	12.1	2.4	chr2	207811138	207811345	(34382184)	C	MIR3	SINE/MIR	(35)	233	3	2210752
1336	8.0	0.0	0.0	chr2	207811393	207811555	(34381974)	+	AluSp	SINE/Alu	130	292	(21)	2210753
378	34.8	2.9	1.2	chr2	208265687	208265903	(33927626)	C	MIR	SINE/MIR	(23)	239	26	2211619
548	31.2	9.4	2.5	chr2	209236373	209236609	(32956920)	+	LTR33	LTR/ERVL	26	280	(235)	2212783
700	16.9	13.4	0.0	chr2	209305598	209305737	(32887792)	C	MSTA	LTR/ERVL-MaLR	(0)	428	267	2212846
4333	18.1	2.9	1.2	chr2	209305738	209306210	(32887319)	C	MER52A	LTR/ERV1	(0)	1755	1280	2212847
4333	19.1	9.8	2.9	chr2	209306971	209307949	(32885580)	C	MER52A	LTR/ERV1	(476)	1279	204	2212847
937	14.7	14.9	0.7	chr2	209307973	209308193	(32885336)	C	MSTA	LTR/ERVL-MaLR	(122)	259	1	2212846
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
457	30.9	12.6	4.7	chr2	209818204	209818458	(32375071)	C	L3	LINE/CR1	(7)	4092	3815	2213528
17152	13.8	2.4	1.7	chr2	209859057	209865278	(32328251)	C	L1PA8A	LINE/L1	(0)	6446	13	2213580
239	28.8	5.3	1.6	chr2	214809057	214809183	(27384346)	+	MER5A	DNA/hAT-Charlie	58	189	(0)	2220125
23	20.3	5.3	1.3	chr2	215436150	215436224	(26757305)	+	(CCCG)n	Simple_repeat	1	79	(0)	2221075
13	13.6	2.9	2.9	chr2	215436365	215436398	(26757131)	+	G-rich	Low_complexity	1	35	(0)	2221076
16	6.3	5.7	2.7	chr2	216081863	216081897	(26111632)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2222151
12	16.5	5.9	0.0	chr2	216283771	216283804	(25909725)	+	(GTGG)n	Simple_repeat	1	36	(0)	2222460
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
248	25.2	10.8	6.1	chr2	216563304	216563417	(25630112)	+	L2c	LINE/L2	3266	3385	(2)	2222986
215	37.1	2.2	0.0	chr2	216607093	216607181	(25586348)	C	L3	LINE/CR1	(0)	4099	4009	2223096
477	31.5	9.2	0.8	chr2	216607316	216607555	(25585974)	+	MER5C1	DNA/hAT-Charlie	1	262	(1)	2223097
14	11.2	2.2	8.5	chr2	216636218	216636263	(25557266)	+	(TCCTC)n	Simple_repeat	1	47	(0)	2223161
15	27.3	0.0	0.0	chr2	216766035	216766079	(25427450)	+	A-rich	Low_complexity	1	45	(0)	2223387
24	23.6	3.0	1.4	chr2	217943798	217943864	(24249665)	+	(AC)n	Simple_repeat	1	69	(0)	2225198
12	22.7	0.0	2.6	chr2	217943923	217943960	(24249569)	+	(CAGTGG)n	Simple_repeat	1	38	(0)	2225199
13	21.7	0.0	2.6	chr2	218367999	218368037	(23825492)	+	G-rich	Low_complexity	1	39	(0)	2225962
2526	5.8	0.0	1.0	chr2	218388088	218388396	(23805133)	+	AluSc	SINE/Alu	1	306	(3)	2226012
18	12.1	2.8	0.0	chr2	218568343	218568378	(23625151)	+	(CACG)n	Simple_repeat	1	37	(0)	2226392
15	7.5	0.0	6.2	chr2	218568413	218568444	(23625085)	+	(CCGCC)n	Simple_repeat	1	32	(0)	2226393
15	23.9	1.6	6.5	chr2	218999728	218999788	(23193741)	+	(TC)n	Simple_repeat	1	62	(0)	2227178
11	18.1	2.4	4.8	chr2	218999873	218999913	(23193616)	+	(TCTCTT)n	Simple_repeat	1	42	(0)	2227179
12	22.1	0.0	0.0	chr2	219176901	219176932	(23016597)	+	(TGCC)n	Simple_repeat	1	32	(0)	2227457
14	16.4	2.9	0.0	chr2	219176946	219176979	(23016550)	+	(CGCCCT)n	Simple_repeat	1	35	(0)	2227458
12	12.6	2.5	7.3	chr2	219294869	219294908	(22898621)	+	(AGGCCC)n	Simple_repeat	1	41	(0)	2227663
17	14.9	0.0	2.6	chr2	219308534	219308572	(22884957)	+	(CCCCACC)n	Simple_repeat	1	39	(0)	2227680
190	20.3	1.5	11.1	chr2	219441615	219441686	(22751843)	+	MIR1_Amn	SINE/MIR	77	141	(89)	2227959
14	8.9	7.9	2.4	chr2	219460655	219460692	(22732837)	+	(CTCCCC)n	Simple_repeat	1	41	(0)	2227982
12	22.7	0.0	8.3	chr2	219552938	219552997	(22640532)	+	(GGAGCC)n	Simple_repeat	1	60	(0)	2228111
715	22.6	10.3	3.6	chr2	219553280	219553504	(22640025)	+	MIRb	SINE/MIR	19	260	(8)	2228112
221	30.2	8.5	5.6	chr2	219569975	219570100	(22623429)	+	MER5A	DNA/hAT-Charlie	14	143	(46)	2228140
1718	15.7	2.6	1.6	chr2	219685183	219685512	(22508017)	+	MER61B	LTR/ERV1	1	427	(0)	2228329
1083	18.3	9.3	7.8	chr2	221712669	221712964	(20480565)	+	MER33	DNA/hAT-Charlie	2	302	(22)	2231506
754	28.2	14.0	3.7	chr2	221713030	221713464	(20480065)	+	L2a	LINE/L2	2940	3426	(0)	2231505
17272	7.4	0.7	1.2	chr2	222366279	222368886	(19824643)	C	L1P2	LINE/L1	(3553)	2593	5	2232483
12	6.8	9.1	2.8	chr2	222671590	222671622	(19521907)	+	(CCCAG)n	Simple_repeat	1	36	(0)	2232961
2267	9.8	0.3	1.9	chr2	222708067	222708383	(19485146)	C	AluSx1	SINE/Alu	(0)	312	1	2233030
12	15.5	3.5	0.0	chr2	222860880	222860908	(19332621)	+	(CGCGC)n	Simple_repeat	1	30	(0)	2233362
289	32.9	7.9	0.8	chr2	223618651	223618796	(18574733)	C	MIRc	SINE/MIR	(42)	166	14	2234499
11	6.7	5.4	7.7	chr2	226031344	226031380	(16162149)	+	(CCCCCTT)n	Simple_repeat	1	39	(0)	2238334
14	22.5	7.0	0.0	chr2	226031454	226031510	(16162019)	+	(GGCTGC)n	Simple_repeat	1	61	(0)	2238335
22	3.0	2.8	2.7	chr2	226792122	226792157	(15401372)	+	(TCTTTT)n	Simple_repeat	1	37	(0)	2239461
740	27.1	0.6	2.8	chr2	228508182	228508363	(13685166)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	2242175
2170	12.1	0.0	2.3	chr2	230847593	230847897	(11345632)	C	AluSz	SINE/Alu	(14)	298	1	2245787
16	20.2	5.3	5.1	chr2	230864784	230864858	(11328671)	+	(GGCGC)n	Simple_repeat	1	79	(0)	2245826
15	16.9	0.0	0.0	chr2	230865085	230865117	(11328412)	+	(GGCGTC)n	Simple_repeat	1	33	(0)	2245827
574	31.9	17.4	5.4	chr2	230902114	230902908	(11290621)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	72	2245886
1786	24.8	7.1	1.5	chr2	230902912	230903390	(11290139)	+	Charlie4a	DNA/hAT-Charlie	1	508	(0)	2245887
208	26.2	1.6	0.0	chr2	231052833	231052893	(11140636)	C	MIRb	SINE/MIR	(186)	82	21	2246150
916	18.9	0.0	1.3	chr2	231323043	231323201	(10870328)	+	FRAM	SINE/Alu	1	157	(19)	2246663
566	17.2	12.8	0.0	chr2	231378923	231379038	(10814491)	C	FLAM_C	SINE/Alu	(10)	133	1	2246770
2174	8.8	0.0	0.4	chr2	231379098	231379369	(10814160)	+	AluSg	SINE/Alu	1	271	(39)	2246771
286	30.5	1.0	2.1	chr2	231388135	231388231	(10805298)	+	MIRc	SINE/MIR	121	216	(52)	2246784
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
283	27.0	1.8	0.4	chr2	231715008	231715117	(10478412)	+	MIRc	SINE/MIR	47	156	(74)	2247484
196	24.6	7.1	0.0	chr2	232388993	232389057	(9804472)	C	LFSINE_Vert	SINE/tRNA	(167)	292	223	2248579
20	22.4	0.0	0.0	chr2	232485727	232485774	(9707755)	+	(CTCCC)n	Simple_repeat	1	48	(0)	2248731
17	10.0	3.1	0.0	chr2	232503174	232503205	(9690324)	+	(CCGCCC)n	Simple_repeat	1	33	(0)	2248757
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
442	22.6	10.7	1.5	chr2	233399149	233399309	(8794220)	+	L2a	LINE/L2	3204	3423	(3)	2250477
280	28.6	7.7	4.5	chr2	234596766	234596941	(7596588)	+	LTR81A	LTR/Gypsy	1	182	(1168)	2252242
451	31.1	8.8	6.3	chr2	236209788	236210230	(5983299)	+	L2c	LINE/L2	2921	3387	(0)	2254674
324	22.4	2.7	0.9	chr2	237122106	237122213	(5071316)	C	Zaphod2	DNA/hAT-Tip100	(1263)	2261	2152	2255974
895	28.8	6.9	2.7	chr2	237122287	237122660	(5070869)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	19	2255975
371	31.7	5.8	0.6	chr2	237165566	237165730	(5027799)	C	L1MEd	LINE/L1	(6671)	432	259	2256026
571	29.5	8.6	2.4	chr2	237210591	237210955	(4982574)	C	L2a	LINE/L2	(0)	3426	2993	2256082
1145	8.3	0.0	0.0	chr2	237211156	237211299	(4982230)	C	MER4A1	LTR/ERV1	(0)	472	329	2256083
18	16.4	7.1	5.6	chr2	237487290	237487373	(4706156)	+	(CGCCCTG)n	Simple_repeat	1	90	(0)	2256427
11	20.6	5.1	0.0	chr2	238096819	238096857	(4096672)	+	(AGTGCCG)n	Simple_repeat	1	41	(0)	2257364
366	20.7	6.5	4.9	chr2	238108041	238108162	(4085367)	C	MIRb	SINE/MIR	(78)	190	67	2257374
14	16.6	2.3	4.4	chr2	238231383	238231426	(3962103)	+	(CGCCCCG)n	Simple_repeat	1	45	(0)	2257540
19	6.6	3.1	0.0	chr2	238231775	238231806	(3961723)	+	(AAAC)n	Simple_repeat	1	33	(0)	2257541
13	19.3	9.4	0.0	chr2	238239917	238239969	(3953560)	+	G-rich	Low_complexity	1	58	(0)	2257547
45	4.2	0.0	0.0	chr2	240025167	240025216	(2168313)	+	(CCACCCCG)n	Simple_repeat	1	50	(0)	2259594
225	26.6	1.5	4.5	chr2	240437044	240437110	(1756419)	C	L2b	LINE/L2	(49)	3326	3262	2260046
203	32.8	0.8	2.3	chr2	240961321	240962103	(1231426)	+	(CA)n	Simple_repeat	1	789	(0)	2260545
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
29	29.1	1.3	5.2	chr2	241218397	241218547	(974982)	+	(GGCGG)n	Simple_repeat	1	153	(0)	2260835
19	26.0	0.0	6.1	chr2	241315875	241315960	(877569)	+	G-rich	Low_complexity	1	80	(0)	2260963
22	22.5	6.1	2.9	chr2	241734481	241734578	(458951)	+	G-rich	Low_complexity	1	104	(0)	2261641
521	10.3	0.0	0.0	chr2	241735716	241735783	(457746)	C	AluSc	SINE/Alu	(1)	308	241	2261642
2200	7.6	0.0	0.0	chr2	241735785	241736060	(457469)	C	AluSc	SINE/Alu	(33)	276	1	2261643
13	18.4	5.7	3.6	chr20	462515	462567	(63981600)	+	(CCGCGGC)n	Simple_repeat	1	56	(0)	2262991
14	20.3	2.0	4.0	chr20	675602	675650	(63768517)	+	(GGCGCGG)n	Simple_repeat	1	50	(0)	2263484
13	29.1	0.0	3.5	chr20	675719	675776	(63768391)	+	(CGGCGG)n	Simple_repeat	1	58	(0)	2263485
186	25.0	11.1	4.6	chr20	1326057	1326165	(63118002)	C	L2c	LINE/L2	(216)	3171	3055	2264812
182	17.0	2.1	2.1	chr20	2006063	2006110	(62438057)	C	L2b	LINE/L2	(0)	3375	3328	2266090
7704	18.8	5.7	1.6	chr20	2244607	2246848	(62197319)	C	MER68-int	LTR/ERVL	(24)	2966	601	2266571
1087	25.9	10.4	1.8	chr20	2471024	2471471	(61972696)	+	L2a	LINE/L2	2926	3416	(10)	2267029
1659	14.8	3.7	0.4	chr20	2524049	2524311	(61919856)	+	AluJb	SINE/Alu	12	283	(29)	2267110
13	17.6	2.4	4.7	chr20	3072033	3072074	(61372093)	+	(CCCCG)n	Simple_repeat	1	43	(0)	2268136
2301	6.4	0.3	7.4	chr20	3160066	3160391	(61283776)	+	AluSx	SINE/Alu	3	305	(7)	2268330
14	8.1	0.0	3.6	chr20	3168339	3168366	(61275801)	+	(GGAGG)n	Simple_repeat	1	28	(0)	2268341
13	24.0	1.4	8.0	chr20	4249526	4249599	(60194568)	+	(CCCTCC)n	Simple_repeat	1	75	(0)	2270439
19	16.4	7.9	1.5	chr20	4249705	4249767	(60194400)	+	(CTGCGGA)n	Simple_repeat	1	68	(0)	2270440
521	13.4	2.4	0.0	chr20	5119169	5119250	(59324917)	+	FLAM_A	SINE/Alu	44	127	(15)	2272054
22	23.8	3.7	2.9	chr20	8132151	8132248	(56311919)	+	G-rich	Low_complexity	1	98	(0)	2276800
15	11.6	0.0	3.3	chr20	9067826	9067855	(55376312)	+	(GGA)n	Simple_repeat	1	30	(0)	2278344
19	21.2	6.2	0.0	chr20	10218724	10218788	(54225379)	+	(CGCCCC)n	Simple_repeat	1	69	(0)	2280187
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
32	10.1	3.8	0.0	chr20	11305775	11305827	(53138340)	+	(CT)n	Simple_repeat	1	55	(0)	2281801
97	26.1	9.2	3.9	chr20	11368902	11369728	(53074439)	+	(CACATG)n	Simple_repeat	1	903	(0)	2281895
22	21.3	6.6	0.0	chr20	13995559	13995634	(50448533)	+	(GGCGAGC)n	Simple_repeat	1	81	(0)	2285791
345	25.5	14.0	4.4	chr20	15976216	15976375	(48467792)	+	Tigger19a	DNA/TcMar-Tigger	146	323	(0)	2288703
36	2.9	0.0	0.0	chr20	17226521	17226555	(47217612)	+	(GA)n	Simple_repeat	1	35	(0)	2290531
29	0.0	0.0	0.0	chr20	17226798	17226825	(47217342)	+	(CGCTG)n	Simple_repeat	1	28	(0)	2290532
28	13.6	0.0	4.8	chr20	17226843	17226904	(47217263)	+	(GGCCG)n	Simple_repeat	1	62	(0)	2290533
25	21.0	0.0	4.2	chr20	17682473	17682543	(46761624)	+	G-rich	Low_complexity	1	71	(0)	2291262
2215	12.5	0.0	0.6	chr20	19958587	19958897	(44485270)	+	AluSz	SINE/Alu	1	309	(3)	2294949
18	9.7	3.0	0.0	chr20	21396154	21396186	(43047981)	+	(GCG)n	Simple_repeat	1	34	(0)	2297033
12	19.1	2.6	2.6	chr20	25058488	25058525	(39385642)	+	(GGCCCAG)n	Simple_repeat	1	39	(0)	2301647
22	24.3	0.0	1.6	chr20	25247981	25248041	(39196126)	+	(CCCGC)n	Simple_repeat	1	61	(0)	2301899
318	26.5	7.8	3.3	chr20	31994810	31994981	(32449186)	C	MIR	SINE/MIR	(0)	268	93	2307368
12	16.2	7.0	2.2	chr20	31995199	31995241	(32448926)	+	(GCAGCT)n	Simple_repeat	1	46	(0)	2307369
58	18.0	2.2	2.1	chr20	32018162	32018298	(32425869)	+	G-rich	Low_complexity	1	140	(0)	2307429
2191	7.6	0.3	9.2	chr20	32778057	32778384	(31665783)	+	AluSc	SINE/Alu	1	299	(10)	2309273
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
22	20.9	4.0	2.6	chr20	35772088	35772164	(28672003)	+	(GGCCG)n	Simple_repeat	1	78	(0)	2316009
2623	4.1	0.0	2.8	chr20	36383694	36384013	(28060154)	+	AluYk3	SINE/Alu	1	311	(0)	2317490
21	3.3	0.0	3.0	chr20	36574476	36574508	(27869659)	+	(CCCCT)n	Simple_repeat	1	33	(0)	2317922
197	34.4	0.0	0.0	chr20	36585826	36585889	(27858278)	C	L2b	LINE/L2	(16)	3359	3296	2317951
12	17.6	5.0	2.4	chr20	36605904	36605943	(27838224)	+	(GGCCC)n	Simple_repeat	1	42	(0)	2318000
195	29.3	8.3	6.2	chr20	36865564	36865774	(27578393)	C	L2b	LINE/L2	(18)	3357	3142	2318644
199	21.3	6.0	0.0	chr20	37229195	37229241	(27214926)	C	MIRc	SINE/MIR	(5)	263	214	2319536
255	32.4	1.8	2.6	chr20	37289861	37289974	(27154193)	C	MIR3	SINE/MIR	(77)	131	19	2319673
468	22.5	16.8	3.3	chr20	37289982	37290165	(27154002)	+	MIRb	SINE/MIR	13	226	(42)	2319674
12	30.6	1.9	0.0	chr20	37406830	37406881	(27037286)	+	(TCTC)n	Simple_repeat	1	53	(0)	2319959
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
192	19.4	2.9	0.0	chr20	37914114	37914522	(26529645)	+	(TG)n	Simple_repeat	1	421	(0)	2321044
18	23.8	0.0	2.0	chr20	38926649	38926699	(25517468)	+	(GCG)n	Simple_repeat	1	51	(0)	2323167
201	23.4	3.8	6.1	chr20	38961850	38961931	(25482236)	C	MIR	SINE/MIR	(87)	175	96	2323234
13	24.1	3.1	4.5	chr20	41137372	41137435	(23306732)	+	G-rich	Low_complexity	1	66	(0)	2327096
304	31.7	8.0	10.3	chr20	41340247	41340489	(23103678)	C	L2b	LINE/L2	(18)	3357	3121	2327403
1721	22.8	5.6	2.0	chr20	41572077	41572470	(22871697)	+	LTR41B	LTR/ERVL	1	409	(349)	2327730
733	24.5	1.9	0.6	chr20	41572655	41572814	(22871353)	+	LTR41B	LTR/ERVL	425	586	(172)	2327730
16	26.6	2.0	1.9	chr20	43458260	43458310	(20985857)	+	(GC)n	Simple_repeat	1	52	(0)	2331218
226	32.5	4.7	3.9	chr20	43657193	43657320	(20786847)	C	L2b	LINE/L2	(97)	3278	3150	2331665
5819	15.4	12.7	2.6	chr20	43720990	43722132	(20722035)	C	MER52C	LTR/ERV1	(0)	1278	4	2331823
212	35.8	1.2	3.6	chr20	44248427	44248510	(20195657)	C	MIR3	SINE/MIR	(37)	171	90	2333008
402	28.5	7.0	2.3	chr20	44271985	44272203	(20171964)	C	LTR33	LTR/ERVL	(277)	238	9	2333063
594	31.8	10.8	0.8	chr20	44272318	44272676	(20171491)	C	L2c	LINE/L2	(1866)	1553	1155	2333056
201	11.4	2.8	0.0	chr20	44475680	44475714	(19968453)	+	MIR3	SINE/MIR	104	139	(69)	2333612
227	16.2	0.0	0.0	chr20	44475684	44475720	(19968447)	+	MIRc	SINE/MIR	112	148	(120)	2333613
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
33	26.3	0.0	0.0	chr20	44885718	44885803	(19558364)	+	(CCG)n	Simple_repeat	1	86	(0)	2334595
207	25.0	0.0	0.0	chr20	45290867	45290910	(19153257)	C	MIRb	SINE/MIR	(174)	94	51	2335317
12	29.8	3.2	1.5	chr20	45342653	45342715	(19101452)	+	G-rich	Low_complexity	1	65	(0)	2335437
16	16.9	1.9	5.7	chr20	45824131	45824182	(18619985)	+	G-rich	Low_complexity	1	53	(0)	2336296
30	0.0	7.7	0.0	chr20	45834377	45834415	(18609752)	+	(CGAGGACGA)n	Simple_repeat	1	42	(0)	2336327
356	28.1	4.2	1.7	chr20	45834596	45834711	(18609456)	+	MIRb	SINE/MIR	76	194	(74)	2336328
189	18.2	6.4	0.0	chr20	45834763	45834806	(18609361)	C	MIRb	SINE/MIR	(5)	263	217	2336329
259	16.7	15.3	0.0	chr20	45834820	45834891	(18609276)	+	MIR	SINE/MIR	108	192	(70)	2336330
207	34.8	13.5	0.0	chr20	45890011	45890145	(18554022)	C	MIR3	SINE/MIR	(19)	189	34	2336485
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
193	30.1	6.4	0.0	chr20	46230858	46230930	(18213237)	C	MIRb	SINE/MIR	(157)	111	34	2337235
12	16.3	2.8	2.7	chr20	46251134	46251169	(18192998)	+	(GCGCCGA)n	Simple_repeat	1	37	(0)	2337289
21	19.2	0.0	0.0	chr20	46251196	46251251	(18192916)	+	(CAG)n	Simple_repeat	1	56	(0)	2337290
341	34.8	8.4	5.6	chr20	46552212	46552535	(17891632)	C	MER102c	DNA/hAT-Charlie	(8)	333	1	2337875
705	23.0	3.3	1.7	chr20	46552609	46552817	(17891350)	+	MIRb	SINE/MIR	23	241	(27)	2337876
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
16	18.3	2.2	2.2	chr20	47502034	47502078	(16942089)	+	(AGGCGG)n	Simple_repeat	1	46	(0)	2340297
238	26.5	5.7	2.4	chr20	48523333	48523417	(15920750)	+	UCON12	Unknown	424	511	(9)	2342279
204	27.1	1.7	0.0	chr20	48620336	48620394	(15823773)	+	MIR	SINE/MIR	22	81	(181)	2342464
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
938	14.7	2.6	0.0	chr20	49979640	49979789	(14464378)	+	AluJo	SINE/Alu	1	154	(158)	2345766
263	22.5	11.0	2.2	chr20	49979807	49979897	(14464270)	C	L2a	LINE/L2	(194)	3232	3133	2345767
17	18.2	0.0	0.0	chr20	49982913	49982943	(14461224)	+	(C)n	Simple_repeat	1	31	(0)	2345774
2312	11.2	0.0	0.0	chr20	50075956	50076251	(14367916)	C	AluSx1	SINE/Alu	(16)	296	1	2346035
14	22.7	1.8	5.2	chr20	50113046	50113102	(14331065)	+	(CCCCGG)n	Simple_repeat	1	58	(0)	2346105
274	31.9	5.8	2.6	chr20	51307089	51307204	(13136963)	C	MIRb	SINE/MIR	(6)	262	143	2348864
13	18.3	5.4	0.0	chr20	56925242	56925278	(7518889)	+	(GCG)n	Simple_repeat	1	39	(0)	2360189
24	24.8	1.1	4.5	chr20	57709861	57709948	(6734219)	+	(CGC)n	Simple_repeat	1	89	(0)	2361623
310	34.7	12.9	1.4	chr20	58619581	58619855	(5824312)	C	L2a	LINE/L2	(5)	3421	3111	2363249
608	24.2	2.1	4.1	chr20	58619898	58620091	(5824076)	C	MIR	SINE/MIR	(13)	249	60	2363250
189	29.2	1.5	3.0	chr20	59042085	59042151	(5402016)	C	MIR3	SINE/MIR	(97)	111	46	2363833
22	22.4	3.9	2.5	chr20	61952051	61952127	(2492040)	+	(GCACAC)n	Simple_repeat	1	80	(0)	2367934
14	14.4	2.3	6.7	chr20	62303150	62303193	(2140974)	+	(GGCG)n	Simple_repeat	1	45	(0)	2368407
16	21.6	5.9	2.8	chr20	62804696	62804763	(1639404)	+	G-rich	Low_complexity	1	72	(0)	2368970
29	27.8	0.9	3.5	chr20	62804889	62805000	(1639167)	+	GA-rich	Low_complexity	1	113	(0)	2368971
186	31.1	15.9	1.3	chr20	62952264	62952413	(1491754)	C	MIRc	SINE/MIR	(0)	268	93	2369130
656	23.9	6.9	5.7	chr20	63082608	63082908	(1361259)	+	LTR16E1	LTR/ERVL	216	520	(18)	2369253
23	21.9	3.1	0.0	chr20	63521933	63521996	(922171)	+	(CCCCCCA)n	Simple_repeat	1	66	(0)	2369664
13	20.1	0.0	2.8	chr20	63978950	63978985	(465182)	+	(TCCG)n	Simple_repeat	1	36	(0)	2370320
13	18.1	8.3	3.1	chr20	63979348	63979407	(464760)	+	(TCCCCGC)n	Simple_repeat	1	65	(0)	2370321
3223	13.1	0.6	2.1	chr21	15752928	15753451	(30956532)	C	LTR72	LTR/ERV1	(0)	519	4	2379585
504	17.2	0.0	1.1	chr21	17454673	17454759	(29255224)	C	AluSp	SINE/Alu	(13)	300	215	2381627
591	4.0	0.0	0.0	chr21	17454786	17454859	(29255124)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	2381628
1887	13.6	0.0	4.2	chr21	17454974	17455283	(29254700)	+	AluJo	SINE/Alu	1	297	(15)	2381629
12	5.6	0.0	0.0	chr21	17612698	17612716	(29097267)	+	(CCG)n	Simple_repeat	1	19	(0)	2381936
12	19.1	5.9	3.7	chr21	26170687	26170737	(20539246)	+	(CCG)n	Simple_repeat	1	54	(0)	2393604
14	14.0	2.1	8.2	chr21	26844279	26844326	(19865657)	+	(CTTCGT)n	Simple_repeat	1	49	(0)	2394581
23	13.4	4.1	0.0	chr21	36542826	36542874	(10167109)	+	(CCCTGC)n	Simple_repeat	1	51	(0)	2410077
13	25.5	3.9	0.0	chr21	36980819	36980869	(9729114)	+	(CAGCCC)n	Simple_repeat	1	53	(0)	2410785
351	28.3	7.5	7.5	chr21	36980979	36981177	(9728806)	+	L2b	LINE/L2	3096	3294	(81)	2410786
15	24.4	2.1	0.0	chr21	36989779	36989826	(9720157)	+	G-rich	Low_complexity	1	49	(0)	2410805
408	31.0	4.4	2.5	chr21	37258211	37258412	(9451571)	+	LTR51	LTR/ERV1	228	433	(238)	2411248
18	0.0	0.0	0.0	chr21	38473160	38473179	(8236804)	+	(A)n	Simple_repeat	1	20	(0)	2413071
451	30.1	5.8	0.5	chr21	38490344	38490540	(8219443)	C	MIR	SINE/MIR	(5)	257	50	2413095
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
18	22.5	1.3	6.5	chr21	46097947	46098022	(611961)	+	(CCGCCTC)n	Simple_repeat	1	77	(0)	2423505
13	10.7	6.7	0.0	chr21	46098050	46098079	(611904)	+	(GGCGG)n	Simple_repeat	1	32	(0)	2423506
15	12.2	0.0	0.0	chr22	17120321	17120347	(33698121)	+	(GTG)n	Simple_repeat	1	27	(0)	2428248
15	20.1	0.0	0.0	chr22	17120597	17120630	(33697838)	+	(GCA)n	Simple_repeat	1	34	(0)	2428249
246	27.7	3.1	4.1	chr22	17257009	17257106	(33561362)	C	MIR3	SINE/MIR	(166)	102	6	2428584
291	32.9	6.1	4.3	chr22	23787518	23787679	(27030789)	C	Charlie19a	DNA/hAT-Charlie	(188)	198	34	2438973
192	31.8	3.1	3.1	chr22	24695752	24695913	(26122555)	+	L2	LINE/L2	2729	2890	(529)	2440486
49	20.8	0.0	0.9	chr22	24696137	24696241	(26122227)	+	(CCT)n	Simple_repeat	1	105	(0)	2440487
274	30.6	11.0	1.2	chr22	24834816	24834987	(25983481)	+	MIRb	SINE/MIR	36	226	(42)	2440764
356	30.7	1.0	1.0	chr22	24835252	24835353	(25983115)	C	MIRb	SINE/MIR	(9)	259	158	2440765
966	26.2	9.9	3.0	chr22	24835331	24835885	(25982583)	C	L2a	LINE/L2	(3)	3423	2817	2440766
349	22.6	0.0	4.2	chr22	25110429	25110551	(25707917)	+	MIRc	SINE/MIR	45	153	(55)	2441502
512	34.1	0.9	4.4	chr22	26511938	26512164	(24306304)	C	MIRb	SINE/MIR	(8)	260	42	2444473
13	18.4	2.1	6.1	chr22	26648392	26648441	(24170027)	+	G-rich	Low_complexity	1	47	(0)	2444850
86	43.0	0.6	0.8	chr22	27312517	27312991	(23505477)	+	(CA)n	Simple_repeat	1	478	(0)	2446435
17756	7.4	1.2	0.0	chr22	27373053	27375745	(23442723)	+	L1P2	LINE/L1	1	2710	(3436)	2446541
2461	6.3	0.3	0.0	chr22	28680332	28680630	(22137838)	C	AluY	SINE/Alu	(11)	300	1	2448923
232	22.4	2.4	5.2	chr22	29470074	29470159	(21348309)	C	MIR3	SINE/MIR	(57)	151	77	2450637
14	22.2	5.5	3.9	chr22	29481001	29481080	(21337388)	+	(GCGACGC)n	Simple_repeat	1	81	(0)	2450661
13	19.2	6.1	1.9	chr22	29553633	29553681	(21264787)	+	(CCCATCT)n	Simple_repeat	1	52	(0)	2450825
242	25.1	9.8	1.5	chr22	29553838	29553941	(21264527)	+	L2a	LINE/L2	3260	3423	(3)	2450826
11	25.3	0.0	5.8	chr22	29580899	29580950	(21237518)	+	(CAGCCC)n	Simple_repeat	1	52	(0)	2450909
17	25.9	3.3	0.0	chr22	30196446	30196505	(20621963)	+	(CGCCAT)n	Simple_repeat	1	62	(0)	2452112
348	30.9	9.7	1.0	chr22	30396693	30396834	(20421634)	C	MIR3	SINE/MIR	(26)	182	34	2452516
390	22.8	7.3	0.0	chr22	30426542	30426668	(20391800)	C	MIRb	SINE/MIR	(98)	170	34	2452590
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
18	7.9	3.7	0.0	chr22	31055534	31055560	(19762908)	+	(AC)n	Simple_repeat	1	28	(0)	2453899
314	27.8	5.8	5.6	chr22	31055967	31056105	(19762363)	+	MIRb	SINE/MIR	17	160	(108)	2453900
603	29.3	12.1	4.8	chr22	31056106	31056362	(19762106)	+	MER46C	DNA/TcMar-Tigger	1	286	(52)	2453901
241	28.6	6.2	3.7	chr22	31080579	31080687	(19737781)	+	MIR3	SINE/MIR	74	185	(23)	2453985
17	20.2	4.8	4.6	chr22	31346017	31346078	(19472390)	+	(CG)n	Simple_repeat	1	65	(0)	2454547
13	28.1	3.6	0.0	chr22	31346606	31346661	(19471807)	+	(CACTCCC)n	Simple_repeat	1	58	(0)	2454549
375	25.4	3.5	2.6	chr22	32106928	32107040	(18711428)	C	MIR3	SINE/MIR	(10)	198	85	2456387
17	8.8	0.0	0.0	chr22	32531900	32531923	(18286545)	+	(T)n	Simple_repeat	1	24	(0)	2457147
18	4.8	0.0	0.0	chr22	34415162	34415183	(16403285)	+	(GT)n	Simple_repeat	1	22	(0)	2461000
184	29.1	14.0	7.1	chr22	35299491	35299616	(15518852)	+	MIR3	SINE/MIR	5	140	(68)	2462659
1460	20.1	5.8	1.7	chr22	35399548	35399846	(15418622)	+	AluJb	SINE/Alu	1	312	(0)	2462903
4701	18.4	3.0	0.5	chr22	36179880	36181488	(14636980)	C	LTR57-int	LTR/ERVL	(1147)	4196	2440	2464525
573	24.7	5.6	0.1	chr22	36410641	36410804	(14407664)	+	MIRc	SINE/MIR	47	210	(52)	2464956
2078	7.2	3.6	0.0	chr22	36481703	36481993	(14336475)	C	AluSc	SINE/Alu	(0)	309	5	2465157
16	13.2	2.1	6.2	chr22	36482131	36482197	(14336271)	+	(GGCGG)n	Simple_repeat	1	64	(0)	2465158
2226	11.2	0.0	0.3	chr22	36482316	36482627	(14335841)	C	AluSz	SINE/Alu	(1)	311	1	2465159
329	31.0	4.2	7.1	chr22	37567755	37567946	(13250522)	+	MIR1_Amn	SINE/MIR	10	193	(69)	2467544
203	32.4	15.5	0.0	chr22	37607019	37607154	(13211314)	C	MIR3	SINE/MIR	(16)	192	32	2467647
2280	3.7	5.5	0.0	chr22	37844596	37844867	(12973601)	C	AluSc	SINE/Alu	(21)	288	1	2468202
2235	6.2	0.4	2.4	chr22	37848993	37849280	(12969188)	C	AluSp	SINE/Alu	(20)	293	12	2468218
502	23.7	3.8	5.0	chr22	37849788	37849947	(12968521)	+	L2c	LINE/L2	3195	3352	(35)	2468219
201	26.3	3.4	0.0	chr22	38052594	38052650	(12765818)	C	MIR3	SINE/MIR	(112)	96	38	2468704
59	0.0	0.0	0.0	chr22	38145785	38145834	(12672634)	+	(AC)n	Simple_repeat	1	50	(0)	2468894
1754	13.7	0.7	7.5	chr22	38145877	38146039	(12672429)	C	AluJr	SINE/Alu	(15)	297	134	2468895
200	29.9	5.8	2.0	chr22	38326233	38326331	(12492137)	+	MIR3	SINE/MIR	16	118	(90)	2469270
1953	8.6	9.5	0.7	chr22	38335558	38335836	(12482632)	+	AluSx	SINE/Alu	1	306	(6)	2469299
25	18.1	0.0	1.7	chr22	38335837	38335859	(12482609)	+	(AAT)n	Simple_repeat	2	24	(0)	2469300
33	24.3	0.0	0.0	chr22	38350876	38350954	(12467514)	+	(ATG)n	Simple_repeat	1	79	(0)	2469337
13	8.5	4.0	0.0	chr22	38422919	38422943	(12395525)	+	(GGGCA)n	Simple_repeat	1	26	(0)	2469454
12	17.5	1.9	9.1	chr22	38423125	38423178	(12395290)	+	GA-rich	Low_complexity	1	55	(0)	2469455
216	31.3	8.2	7.4	chr22	38655927	38656047	(12162421)	+	MIRb	SINE/MIR	26	147	(121)	2470028
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
16	4.3	0.0	3.9	chr22	38824868	38824893	(11993575)	+	(CTC)n	Simple_repeat	1	26	(0)	2470347
1650	17.1	0.4	1.8	chr22	39017367	39017646	(11800822)	+	AluJb	SINE/Alu	12	287	(25)	2470721
16	18.1	4.3	2.1	chr22	39017707	39017758	(11800710)	+	(CTC)n	Simple_repeat	1	53	(0)	2470722
1589	15.4	0.4	0.7	chr22	39020095	39020349	(11798119)	+	MER49	LTR/ERV1	641	894	(29)	2470726
12	15.3	5.3	2.5	chr22	39021600	39021637	(11796831)	+	(CCTAGC)n	Simple_repeat	1	40	(0)	2470729
1744	18.4	0.3	0.7	chr22	39031297	39031589	(11786879)	+	AluJb	SINE/Alu	12	303	(9)	2470747
17	20.4	2.1	2.1	chr22	39031640	39031686	(11786782)	+	(CTC)n	Simple_repeat	1	48	(0)	2470748
1810	15.9	0.3	1.0	chr22	39051681	39051970	(11766498)	+	AluJb	SINE/Alu	12	299	(13)	2470787
16	18.1	4.3	2.1	chr22	39052015	39052066	(11766402)	+	(CTC)n	Simple_repeat	1	53	(0)	2470788
264	27.1	1.4	0.0	chr22	39098073	39098142	(11720326)	+	MIR	SINE/MIR	77	147	(115)	2470871
734	12.1	6.6	1.7	chr22	39098237	39098352	(11720116)	C	AluYc	SINE/Alu	(6)	293	172	2470872
784	16.7	0.0	2.9	chr22	39098353	39098490	(11719978)	+	AluJr	SINE/Alu	1	134	(178)	2470873
19	10.4	0.0	0.0	chr22	39145719	39145760	(11672708)	+	(GGGGGC)n	Simple_repeat	1	42	(0)	2470988
15	12.2	5.6	0.0	chr22	39152802	39152837	(11665631)	+	G-rich	Low_complexity	1	38	(0)	2471006
15	29.9	0.0	0.0	chr22	39153192	39153238	(11665230)	+	(TCCA)n	Simple_repeat	1	47	(0)	2471007
339	28.7	0.9	7.3	chr22	39175161	39175284	(11643184)	+	MIRc	SINE/MIR	39	154	(114)	2471055
1087	12.1	0.0	0.0	chr22	39399407	39399555	(11418913)	+	AluSx1	SINE/Alu	149	297	(15)	2471576
30	0.0	5.7	0.0	chr22	39399587	39399621	(11418847)	+	(ACA)n	Simple_repeat	1	37	(0)	2471577
206	30.9	0.0	5.6	chr22	39523596	39523667	(11294801)	C	MIRb	SINE/MIR	(38)	230	163	2471817
533	26.0	16.1	0.7	chr22	39533980	39534201	(11284267)	C	MIR	SINE/MIR	(0)	262	9	2471836
580	23.7	4.9	4.9	chr22	39534501	39534664	(11283804)	+	L2a	LINE/L2	3263	3426	(0)	2471837
270	28.4	4.7	6.4	chr22	40209407	40209515	(10608953)	+	MIRb	SINE/MIR	26	132	(136)	2473133
308	28.1	1.0	3.7	chr22	40209618	40209724	(10608744)	+	MIRb	SINE/MIR	72	175	(93)	2473134
2330	10.6	0.0	0.0	chr22	40209739	40210039	(10608429)	+	AluSg7	SINE/Alu	1	301	(8)	2473135
187	32.8	1.6	0.0	chr22	40346274	40346334	(10472134)	C	MIR	SINE/MIR	(102)	160	99	2473377
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
16	0.0	0.0	0.0	chr22	40856967	40856984	(9961484)	+	(A)n	Simple_repeat	1	18	(0)	2474500
13	13.6	7.1	2.2	chr22	41237487	41237528	(9580940)	+	(GCAGG)n	Simple_repeat	1	45	(0)	2475447
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
1881	9.2	10.9	0.0	chr22	41682687	41682948	(9135520)	C	AluSx1	SINE/Alu	(18)	294	1	2476500
23	20.5	1.6	4.1	chr22	41910210	41910277	(8908191)	+	G-rich	Low_complexity	1	66	(0)	2477040
17	16.6	6.4	0.0	chr22	41926171	41926217	(8892251)	+	(CACCAG)n	Simple_repeat	1	50	(0)	2477065
244	22.8	2.3	4.9	chr22	41941612	41941693	(8876775)	+	MIRc	SINE/MIR	29	121	(147)	2477095
301	26.9	18.5	0.0	chr22	41941798	41941964	(8876504)	C	Charlie4a	DNA/hAT-Charlie	(152)	356	152	2477096
2229	9.0	1.0	1.7	chr22	41947368	41947668	(8870800)	C	AluSz	SINE/Alu	(13)	299	1	2477108
196	25.9	1.1	14.4	chr22	41957507	41957610	(8860858)	+	MIR3	SINE/MIR	86	175	(33)	2477139
16	6.7	2.9	5.6	chr22	41957929	41957963	(8860505)	+	(CGCC)n	Simple_repeat	1	36	(0)	2477140
13	17.3	7.3	0.0	chr22	42283920	42283960	(8534508)	+	GA-rich	Low_complexity	1	44	(0)	2477719
18	13.1	5.4	5.1	chr22	42284090	42284145	(8534323)	+	G-rich	Low_complexity	1	59	(0)	2477720
439	32.1	2.1	0.0	chr22	42294645	42294784	(8523684)	C	MIRb	SINE/MIR	(37)	231	89	2477744
362	26.6	11.0	4.9	chr22	42369558	42369719	(8448749)	+	L2b	LINE/L2	3199	3371	(4)	2477900
277	25.9	8.6	0.0	chr22	42369756	42369840	(8448628)	C	MIR	SINE/MIR	(74)	188	96	2477901
1784	15.6	0.7	3.3	chr22	42369996	42370302	(8448166)	+	AluJr	SINE/Alu	2	300	(12)	2477902
2431	6.4	0.7	0.0	chr22	42509965	42510261	(8308207)	C	AluY	SINE/Alu	(12)	299	1	2478248
888	25.2	4.8	8.8	chr22	42510262	42510312	(8308156)	+	L1MB8	LINE/L1	6112	6161	(17)	2478247
13	12.0	0.0	3.5	chr22	42510444	42510472	(8307996)	+	(AGCTG)n	Simple_repeat	1	29	(0)	2478249
13	21.6	6.2	0.0	chr22	42519858	42519905	(8298563)	+	(CCCGC)n	Simple_repeat	1	51	(0)	2478260
2498	5.1	0.0	0.0	chr22	42553160	42553452	(8265016)	C	AluYe5	SINE/Alu	(17)	293	1	2478361
180	26.9	6.3	11.9	chr22	42553453	42553547	(8264921)	C	L2b	LINE/L2	(16)	3359	3265	2478360
217	25.8	5.1	4.1	chr22	42867432	42867528	(7950940)	+	MIR3	SINE/MIR	85	182	(26)	2479122
219	29.1	1.5	1.4	chr22	43110332	43110440	(7708028)	+	MIR3	SINE/MIR	98	214	(54)	2479619
20	10.8	2.4	2.3	chr22	43110670	43110711	(7707757)	+	G-rich	Low_complexity	1	43	(0)	2479620
1333	19.0	16.4	1.6	chr22	43868171	43868614	(6949854)	C	LTR49	LTR/ERV1	(72)	523	1	2480907
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
181	24.8	9.8	10.6	chr22	43955786	43955898	(6862570)	C	MIR3	SINE/MIR	(78)	130	19	2481086
20	10.7	2.4	2.3	chr22	44024223	44024264	(6794204)	+	G-rich	Low_complexity	1	43	(0)	2481218
12	11.1	0.0	8.6	chr22	44957070	44957104	(5861364)	+	(CCACCT)n	Simple_repeat	1	35	(0)	2482945
2024	13.7	0.0	1.4	chr22	44975885	44976177	(5842291)	+	AluJb	SINE/Alu	1	289	(23)	2482976
188	27.0	1.3	6.3	chr22	45241439	45241517	(5576951)	+	MIRc	SINE/MIR	118	192	(76)	2483505
465	10.9	8.3	1.7	chr22	45979405	45980445	(4838023)	+	(CA)n	Simple_repeat	1	1127	(0)	2484826
27	5.2	6.3	3.0	chr22	48837540	48837602	(1980866)	+	(CACACACATG)n	Simple_repeat	1	67	(0)	2488665
579	29.9	12.6	1.2	chr22	48837763	48838161	(1980307)	C	L1M5	LINE/L1	(1315)	4831	4381	2488666
20	28.5	1.2	2.5	chr22	49983630	49983709	(834759)	+	(CCCCGC)n	Simple_repeat	1	81	(0)	2490026
12	15.3	3.5	0.0	chr22	50247870	50247898	(570570)	+	(CCCAG)n	Simple_repeat	1	30	(0)	2490376
206	24.7	0.0	1.9	chr22	50271032	50271092	(547376)	+	L2b	LINE/L2	3125	3181	(194)	2490388
86	15.6	7.8	1.9	chr22	50307696	50307937	(510531)	+	G-rich	Low_complexity	1	261	(0)	2490424
40	32.9	0.0	2.0	chr3	9249278	9249424	(189046135)	+	(CA)n	Simple_repeat	1	147	(0)	2506817
730	31.8	6.9	4.6	chr3	10627699	10628371	(187667188)	C	L2b	LINE/L2	(0)	3375	2677	2509796
323	25.4	12.1	1.4	chr3	10816917	10817056	(187478503)	C	MIRb	SINE/MIR	(14)	254	98	2510176
13	19.6	4.0	3.9	chr3	11719645	11719694	(186575865)	+	(AGGCC)n	Simple_repeat	1	52	(0)	2511933
338	30.7	6.4	1.1	chr3	13162553	13162743	(185132816)	C	L1MC5a	LINE/L1	(1982)	795	594	2514748
12	23.1	2.0	4.0	chr3	23945800	23945848	(174349711)	+	(GCCCG)n	Simple_repeat	1	50	(0)	2531075
15	9.8	0.0	0.0	chr3	23946025	23946046	(174349513)	+	(GC)n	Simple_repeat	1	22	(0)	2531076
12685	18.3	7.6	3.1	chr3	31561644	31563242	(166732317)	C	L1MA4A	LINE/L1	(5110)	2456	730	2542286
41	9.3	0.0	0.0	chr3	31980806	31980863	(166314696)	+	(CA)n	Simple_repeat	1	58	(0)	2542974
13	17.6	5.0	0.0	chr3	31980864	31980894	(166314665)	+	(CGCG)n	Simple_repeat	1	33	(0)	2542975
18	19.6	3.7	1.8	chr3	32106453	32106506	(166189053)	+	G-rich	Low_complexity	1	56	(0)	2543220
18	28.8	1.1	5.3	chr3	33277592	33277684	(165017875)	+	G-rich	Low_complexity	1	94	(0)	2545610
26	24.9	1.2	2.4	chr3	33440394	33440477	(164855082)	+	(CGCCC)n	Simple_repeat	1	85	(0)	2545867
373	27.4	7.8	3.0	chr3	42772835	42773074	(155522485)	+	MIRc	SINE/MIR	2	259	(9)	2559634
441	19.1	16.6	1.5	chr3	43894078	43894210	(154401349)	+	MIR	SINE/MIR	9	165	(97)	2561331
20	32.8	2.8	0.0	chr3	43894415	43894486	(154401073)	+	(GC)n	Simple_repeat	1	74	(0)	2561332
380	34.0	6.3	1.0	chr3	44554812	44555007	(153740552)	C	MIRb	SINE/MIR	(19)	249	43	2562296
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
17	15.7	2.2	4.3	chr3	45594048	45594093	(152701466)	+	(CGCC)n	Simple_repeat	1	47	(0)	2564111
385	29.6	9.0	6.2	chr3	46662022	46662764	(151632795)	C	L2b	LINE/L2	(38)	3337	2565	2565763
625	26.8	3.0	0.0	chr3	46662890	46663053	(151632506)	+	LTR75B	LTR/ERVL	11	179	(429)	2565764
20	18.0	3.3	3.2	chr3	48187990	48188049	(150107510)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	2568895
11	27.9	1.6	4.8	chr3	48446890	48446951	(149848608)	+	G-rich	Low_complexity	1	63	(0)	2569324
2217	9.9	0.0	1.0	chr3	48474323	48474636	(149820923)	C	AluSx	SINE/Alu	(1)	311	1	2569369
264	31.7	7.2	5.3	chr3	48474703	48475109	(149820450)	+	L2b	LINE/L2	2949	3367	(20)	2569370
13	8.5	0.0	3.7	chr3	48685810	48685836	(149609723)	+	(GGCAG)n	Simple_repeat	1	27	(0)	2569696
17	26.6	5.3	3.0	chr3	48685860	48685954	(149609605)	+	(CGCCG)n	Simple_repeat	1	100	(0)	2569697
15	14.9	2.6	2.5	chr3	48686065	48686103	(149609456)	+	(CCCCTCA)n	Simple_repeat	1	40	(0)	2569698
458	25.2	1.8	0.0	chr3	48717505	48717611	(149577948)	C	MER81	DNA/hAT-Blackjack	(5)	109	1	2569769
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
16	26.7	0.0	3.5	chr3	49470325	49470381	(148825178)	+	(GGC)n	Simple_repeat	1	57	(0)	2571453
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
17	6.3	2.7	5.3	chr3	49724202	49724238	(148571321)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	2571830
13	14.2	3.2	0.0	chr3	49869937	49869967	(148425592)	+	G-rich	Low_complexity	1	32	(0)	2572130
184	30.0	4.8	7.7	chr3	50140537	50140666	(148154893)	+	L2b	LINE/L2	3105	3230	(145)	2572679
2568	2.5	0.0	0.0	chr3	50226615	50226899	(148068660)	C	AluYk2	SINE/Alu	(13)	298	14	2572790
12	15.2	3.9	7.5	chr3	50322781	50322831	(147972728)	+	(TCCC)n	Simple_repeat	1	53	(0)	2572911
14	11.0	0.0	5.9	chr3	50337380	50337417	(147958142)	+	(GCGTGC)n	Simple_repeat	1	35	(0)	2572924
13	18.2	2.6	2.5	chr3	50359148	50359186	(147936373)	+	(AGGCCC)n	Simple_repeat	1	40	(0)	2572946
28	29.3	2.8	0.9	chr3	51391240	51391358	(146904201)	+	(CGC)n	Simple_repeat	1	121	(0)	2574235
18	29.8	2.1	4.0	chr3	51392189	51392285	(146903274)	+	(CGC)n	Simple_repeat	1	99	(0)	2574238
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
24	24.2	3.6	2.4	chr3	51706982	51707105	(146588454)	+	G-rich	Low_complexity	1	125	(0)	2574851
14	20.9	5.1	3.2	chr3	51955866	51955924	(146339635)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2575221
283	36.8	6.1	0.6	chr3	51974363	51974518	(146321041)	+	MIRb	SINE/MIR	30	194	(74)	2575245
280	8.8	0.0	0.0	chr3	52154795	52154828	(146140731)	+	AluSp	SINE/Alu	232	265	(48)	2575490
2313	8.2	2.6	0.0	chr3	52239751	52240044	(146055515)	C	AluSp	SINE/Alu	(0)	313	12	2575622
92	29.9	1.6	4.1	chr3	52410122	52410550	(145885009)	+	G-rich	Low_complexity	1	436	(0)	2575858
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
12	4.3	8.3	0.0	chr3	53222727	53222750	(145072809)	+	(CCT)n	Simple_repeat	1	26	(0)	2577243
898	19.8	1.8	2.4	chr3	53251687	53251853	(145043706)	+	AluJr	SINE/Alu	137	302	(10)	2577288
2338	6.8	1.4	1.4	chr3	53251858	53252153	(145043406)	+	AluSp	SINE/Alu	1	296	(17)	2577289
2421	18.7	6.4	10.4	chr3	53258615	53259265	(145036294)	+	MER21A	LTR/ERVL	303	925	(6)	2577303
496	26.4	7.0	3.9	chr3	54630486	54630666	(143664893)	C	MER103C	DNA/hAT-Charlie	(102)	195	9	2579322
257	28.9	13.9	4.7	chr3	57160786	57160804	(141134755)	C	MER5A	DNA/hAT-Charlie	(18)	171	116	2583439
269	23.5	1.2	11.5	chr3	57160805	57160900	(141134659)	+	MER5A1	DNA/hAT-Charlie	52	137	(29)	2583440
257	28.9	13.9	4.7	chr3	57160901	57160934	(141134625)	C	MER5A	DNA/hAT-Charlie	(18)	115	7	2583439
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
13	14.5	3.2	0.0	chr3	58008464	58008494	(140287065)	+	(CCCGCT)n	Simple_repeat	1	32	(0)	2585183
499	14.8	8.2	16.1	chr3	58049037	58049222	(140246337)	C	MER53	DNA/hAT	(5)	188	19	2585276
19	31.7	1.0	3.8	chr3	58237792	58237895	(140057664)	+	G-rich	Low_complexity	1	105	(0)	2585629
15	16.5	8.9	1.6	chr3	58332712	58332767	(139962792)	+	(GCGCAG)n	Simple_repeat	1	61	(0)	2585826
229	29.3	17.6	0.6	chr3	58434127	58434291	(139861268)	C	L3	LINE/CR1	(15)	4084	3886	2586005
21400	12.7	4.5	1.6	chr3	63011525	63016275	(135279284)	C	L1PA8A	LINE/L1	(1450)	5011	19	2593290
24562	5.3	0.8	0.1	chr3	63255613	63261711	(135033848)	+	L1PA3	LINE/L1	2	6137	(18)	2593720
16	0.0	0.0	0.0	chr3	64030658	64030675	(134264884)	+	(A)n	Simple_repeat	1	18	(0)	2595048
311	31.0	1.6	3.0	chr3	64489669	64489875	(133805684)	+	MIR	SINE/MIR	35	242	(26)	2595830
33	2.9	0.0	0.0	chr3	66442441	66442475	(131853084)	+	(GAG)n	Simple_repeat	1	35	(0)	2599221
331	26.3	7.9	8.4	chr3	66572909	66573074	(131722485)	+	MamGypLTR3a	LTR/Gypsy	114	278	(703)	2599450
4673	14.6	2.0	4.6	chr3	66858319	66858946	(131436613)	+	LTR1A1	LTR/ERV1	192	799	(0)	2600001
377	22.7	7.7	3.6	chr3	66858947	66858975	(131436584)	C	MER5A1	DNA/hAT-Charlie	(115)	51	23	2600000
837	26.0	12.8	6.9	chr3	66858991	66859408	(131436151)	+	LTR16A1	LTR/ERVL	11	456	(0)	2600003
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
12	19.6	0.0	0.0	chr3	67654708	67654736	(130640823)	+	(GGCCG)n	Simple_repeat	1	29	(0)	2601161
38	2.8	0.0	0.0	chr3	69250282	69250318	(129045241)	+	(TG)n	Simple_repeat	1	37	(0)	2603777
12	21.2	1.8	7.0	chr3	71725754	71725809	(126569750)	+	G-rich	Low_complexity	1	57	(0)	2607704
14	35.0	3.3	1.1	chr3	71725865	71725956	(126569603)	+	(GATG)n	Simple_repeat	1	95	(0)	2607705
434	27.8	3.4	3.4	chr3	72996453	72996601	(125298958)	C	MIRb	SINE/MIR	(74)	194	46	2610397
21	6.5	0.0	0.0	chr3	72996644	72996675	(125298884)	+	(CTGGGG)n	Simple_repeat	1	32	(0)	2610398
25769	5.1	1.5	0.3	chr3	75845059	75851126	(122444433)	C	L1PA5	LINE/L1	(1)	6153	1	2614775
233	35.1	1.3	2.0	chr3	77475469	77475619	(120819940)	+	UCON66	Unknown	296	445	(120)	2616929
14	22.4	4.3	0.0	chr3	78322799	78322845	(119972714)	+	(ACATAC)n	Simple_repeat	1	49	(0)	2617990
3763	21.3	5.5	5.2	chr3	85901634	85903611	(112391948)	C	L1MB7	LINE/L1	(3630)	3237	2083	2627624
1957	24.4	9.9	4.1	chr3	85903591	85904697	(112390862)	C	L1MB7	LINE/L1	(5566)	1301	29	2627624
19	26.4	4.1	4.5	chr3	87792497	87792618	(110502941)	+	GA-rich	Low_complexity	1	121	(0)	2629960
26824	3.6	0.1	0.1	chr3	89747614	89753632	(108541927)	+	L1PA3	LINE/L1	124	6145	(10)	2632387
1091	9.0	7.8	2.8	chr3	98196234	98196415	(100099144)	+	HERVH-int	LTR/ERV1	7522	7713	(0)	2638697
2245	9.6	16.5	0.5	chr3	98196416	98196791	(100098768)	+	LTR7	LTR/ERV1	1	448	(2)	2638697
214	23.0	10.8	5.1	chr3	100709028	100709105	(97586454)	+	L2a	LINE/L2	3344	3426	(0)	2642106
2478	7.0	0.0	0.7	chr3	101561335	101561645	(96733914)	C	AluSz	SINE/Alu	(0)	312	1	2643181
19	3.8	0.0	0.0	chr3	101779608	101779634	(96515925)	+	(GGCGG)n	Simple_repeat	1	27	(0)	2643594
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
670	29.7	2.6	1.7	chr3	107285244	107285456	(91010103)	C	MIR	SINE/MIR	(53)	209	1	2650618
2221	19.9	3.0	1.0	chr3	109234096	109234592	(89060967)	+	L1PA8	LINE/L1	2	508	(5367)	2653481
8695	13.8	1.9	1.5	chr3	109234593	109236100	(89059459)	+	L1PA8	LINE/L1	725	2238	(4245)	2653481
488	25.0	9.7	1.1	chr3	113440946	113441123	(84854436)	C	MIR	SINE/MIR	(7)	255	61	2659191
16	13.2	0.0	9.8	chr3	113696289	113696339	(84599220)	+	(CCGCCC)n	Simple_repeat	1	51	(0)	2659586
26	23.7	4.1	6.5	chr3	115623333	115623479	(82672080)	+	GA-rich	Low_complexity	1	153	(0)	2662366
11163	16.7	2.4	8.8	chr3	119125667	119128076	(79167483)	+	L1PA10	LINE/L1	178	2474	(4009)	2667124
13	14.1	3.0	2.9	chr3	119294093	119294130	(79001429)	+	(CGG)n	Simple_repeat	1	38	(0)	2667323
23	27.1	0.0	0.0	chr3	119463509	119463574	(78831985)	+	(GCCAGA)n	Simple_repeat	1	66	(0)	2667614
24	23.3	5.2	5.7	chr3	119702855	119702988	(78592571)	+	(TCC)n	Simple_repeat	1	141	(0)	2668038
19	23.1	4.0	2.6	chr3	120285175	120285248	(78010311)	+	(GCGCCGG)n	Simple_repeat	1	77	(0)	2668922
718	29.2	2.6	1.7	chr3	120596707	120596936	(77698623)	+	MIR	SINE/MIR	21	252	(10)	2669376
3640	17.9	0.9	2.9	chr3	122000282	122000932	(76294627)	+	MER21C	LTR/ERVL	301	938	(0)	2671323
5386	8.3	0.1	1.2	chr3	122442830	122443535	(75852024)	+	L1PA6	LINE/L1	1	702	(5482)	2672006
13	18.2	0.0	0.0	chr3	122795234	122795264	(75500295)	+	G-rich	Low_complexity	1	31	(0)	2672621
15	17.6	0.0	0.0	chr3	122795282	122795313	(75500246)	+	(GGC)n	Simple_repeat	1	32	(0)	2672622
14	10.3	2.9	5.6	chr3	122795341	122795375	(75500184)	+	(GCT)n	Simple_repeat	1	36	(0)	2672623
271	20.2	20.8	1.0	chr3	123960827	123960926	(74334633)	C	MIRb	SINE/MIR	(117)	151	27	2674567
228	22.0	0.0	0.0	chr3	124761289	124761338	(73534221)	+	MIR3	SINE/MIR	135	184	(24)	2675825
1797	17.5	0.3	1.3	chr3	124761557	124761859	(73533700)	+	AluJo	SINE/Alu	1	300	(12)	2675826
680	25.2	4.7	9.2	chr3	125862459	125862751	(72432808)	C	L1MC5a	LINE/L1	(6)	2771	2493	2677793
709	22.0	1.3	2.0	chr3	125862816	125862968	(72432591)	C	MER5A1	DNA/hAT-Charlie	(0)	166	15	2677794
375	27.0	9.9	2.8	chr3	126213694	126213834	(72081725)	C	L1M5	LINE/L1	(467)	5775	5624	2678261
12	7.5	6.7	3.1	chr3	127002441	127002470	(71293089)	+	(GCCCT)n	Simple_repeat	1	32	(0)	2679383
259	13.6	1.5	1.5	chr3	127162792	127162858	(71132701)	+	MER33	DNA/hAT-Charlie	208	274	(50)	2679614
280	31.6	5.4	6.6	chr3	127457412	127457740	(70837819)	+	L1ME3G	LINE/L1	530	806	(118)	2680069
267	16.8	0.5	0.0	chr3	127548260	127548315	(70747244)	+	MIRb	SINE/MIR	113	170	(98)	2680228
322	27.5	5.7	6.9	chr3	127628620	127628779	(70666780)	C	MIR3	SINE/MIR	(45)	163	6	2680396
25	23.9	1.9	5.7	chr3	128052314	128052417	(70243142)	+	(GCGGC)n	Simple_repeat	1	106	(0)	2681126
13	12.6	8.9	2.0	chr3	128052382	128052426	(70243133)	+	(CCGCCGCCG)n	Simple_repeat	1	49	(0)	2681127
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
23	26.9	1.2	2.5	chr3	132034898	132034977	(66260582)	+	GA-rich	Low_complexity	1	81	(0)	2687845
8001	18.3	4.0	7.4	chr3	132381357	132382046	(65913513)	C	MER52A	LTR/ERV1	(0)	1755	1055	2688391
18	29.3	1.7	0.0	chr3	133038328	133038385	(65257174)	+	(GC)n	Simple_repeat	1	59	(0)	2689335
13	15.9	0.0	0.0	chr3	133038492	133038519	(65257040)	+	G-rich	Low_complexity	1	28	(0)	2689336
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
13	18.9	0.0	0.0	chr3	134651262	134651291	(63644268)	+	(CCTC)n	Simple_repeat	1	30	(0)	2691733
333	32.5	11.8	5.3	chr3	135965611	135965668	(62329891)	C	L1MEc	LINE/L1	(6337)	530	465	2693576
28	3.3	0.0	0.0	chr3	135965669	135965699	(62329860)	+	(GAG)n	Simple_repeat	1	31	(0)	2693592
333	32.5	11.8	5.3	chr3	135965700	135965939	(62329620)	C	L1MEc	LINE/L1	(6403)	464	210	2693576
17	17.2	4.2	2.0	chr3	135965941	135965988	(62329571)	+	(GGCCG)n	Simple_repeat	1	50	(0)	2693593
11	22.5	2.2	4.3	chr3	136195597	136195642	(62099917)	+	(GGCGGC)n	Simple_repeat	1	47	(0)	2693943
2293	17.5	4.9	0.7	chr3	136860454	136860867	(61434692)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2695243
15	24.4	2.2	2.2	chr3	137764076	137764120	(60531439)	+	(CT)n	Simple_repeat	1	46	(0)	2696489
266	13.8	3.3	3.3	chr3	137971444	137971503	(60324056)	+	MER5B	DNA/hAT-Charlie	11	70	(108)	2696758
1116	17.8	7.6	0.0	chr3	137971525	137971813	(60323746)	+	MER33	DNA/hAT-Charlie	1	302	(22)	2696759
543	22.0	1.7	0.0	chr3	138408752	138408869	(59886690)	+	MER5A1	DNA/hAT-Charlie	33	152	(14)	2697485
581	27.9	7.3	6.6	chr3	140941197	140941468	(57354091)	C	L1ME3G	LINE/L1	(291)	633	360	2701539
13	34.2	0.0	0.0	chr3	141051089	141051141	(57244418)	+	(GAGT)n	Simple_repeat	1	53	(0)	2701694
1747	14.4	1.1	3.2	chr3	142065155	142065438	(56230121)	C	AluJb	SINE/Alu	(17)	295	18	2703472
38	2.8	0.0	0.0	chr3	142065491	142065527	(56230032)	+	(TG)n	Simple_repeat	1	37	(0)	2703473
1908	13.1	0.0	0.4	chr3	142065528	142065786	(56229773)	C	AluSz	SINE/Alu	(28)	284	27	2703474
13	22.3	0.0	8.2	chr3	143119664	143119724	(55175835)	+	G-rich	Low_complexity	1	61	(0)	2705218
14	26.8	3.2	6.1	chr3	143971700	143971794	(54323765)	+	(CCGCTC)n	Simple_repeat	1	98	(0)	2706423
15	16.6	0.0	0.0	chr3	143971976	143972002	(54323557)	+	(GC)n	Simple_repeat	1	27	(0)	2706424
261	41.2	9.1	0.0	chr3	144859202	144859592	(53435967)	C	MamRTE1	LINE/RTE-BovB	(42)	3770	3341	2707595
429	26.2	0.8	0.0	chr3	147341688	147341813	(50953746)	C	UCON46	Unknown	(54)	127	1	2710676
340	37.4	1.7	6.5	chr3	147341995	147342180	(50953379)	C	MER5A	DNA/hAT-Charlie	(0)	189	13	2710677
17	6.9	3.0	2.9	chr3	147397079	147397111	(50898448)	+	(TTCT)n	Simple_repeat	1	34	(0)	2710727
17	10.7	3.1	3.0	chr3	147397327	147397358	(50898201)	+	(TC)n	Simple_repeat	1	33	(0)	2710728
5397	21.4	7.4	2.5	chr3	149935119	149937580	(48357979)	C	L1M1	LINE/L1	(3733)	3829	1251	2714459
36	16.3	3.1	4.0	chr3	149970880	149970975	(48324584)	+	(GCG)n	Simple_repeat	1	99	(0)	2714495
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
1106	8.8	18.3	0.6	chr3	150703066	150703236	(47592323)	+	AluJr	SINE/Alu	86	293	(19)	2715697
15	9.7	6.1	0.0	chr3	150788112	150788144	(47507415)	+	(TTTTG)n	Simple_repeat	1	35	(0)	2715856
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
3773	11.9	3.0	0.0	chr3	156093767	156094279	(42201280)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2723559
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
18	7.6	0.0	0.0	chr3	157159984	157160011	(41135548)	+	(CGT)n	Simple_repeat	1	28	(0)	2725060
15	26.4	0.0	0.0	chr3	158098206	158098250	(40197309)	+	G-rich	Low_complexity	1	45	(0)	2726357
12	19.6	2.9	0.0	chr3	161104922	161104956	(37190603)	+	(GCGGCC)n	Simple_repeat	1	36	(0)	2730834
1997	9.3	9.0	10.6	chr3	162598531	162598946	(35696613)	+	LTR14B	LTR/ERVK	1	608	(0)	2732796
21	0.0	0.0	0.0	chr3	168248611	168248633	(30046926)	+	(T)n	Simple_repeat	1	23	(0)	2739795
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
2456	9.3	0.0	1.0	chr3	170280450	170280749	(28014810)	C	AluSz	SINE/Alu	(15)	297	1	2742734
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
18	16.0	0.0	0.0	chr3	170908597	170908631	(27386928)	+	(GCG)n	Simple_repeat	1	35	(0)	2743786
856	11.2	0.0	0.0	chr3	173866265	173866380	(24429179)	+	AluSq2	SINE/Alu	196	311	(2)	2748134
644	34.5	5.2	5.8	chr3	175939986	175941418	(22354141)	+	L1PA15-16	LINE/L1	14	1542	(5324)	2751049
1902	22.0	13.1	5.1	chr3	176505793	176506382	(21789177)	C	LTR9B	LTR/ERV1	(0)	644	1	2751774
40	4.5	2.1	0.0	chr3	181699496	181699542	(16596017)	+	(CT)n	Simple_repeat	1	48	(0)	2759743
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
267	32.2	11.2	0.0	chr3	184574331	184574473	(13721086)	C	MIRb	SINE/MIR	(65)	203	43	2764934
14	13.2	2.9	2.8	chr3	185813877	185813911	(12481648)	+	GA-rich	Low_complexity	1	36	(0)	2767141
472	26.8	13.7	2.1	chr3	186998850	186999036	(11296523)	C	MIRb	SINE/MIR	(50)	218	7	2769404
203	30.6	3.0	4.8	chr3	186999225	186999327	(11296232)	+	MIRb	SINE/MIR	154	254	(14)	2769405
16	6.8	6.5	0.0	chr3	187139537	187139578	(11155981)	+	(GGCCCC)n	Simple_repeat	1	44	(0)	2769652
827	24.1	8.3	5.0	chr3	187275498	187275777	(11019782)	+	MER63D	DNA/hAT-Blackjack	5	294	(767)	2769868
12	15.3	5.3	2.5	chr3	187990013	187990050	(10305509)	+	(CTGCAT)n	Simple_repeat	1	40	(0)	2771083
12	13.5	0.0	7.9	chr3	188153852	188153889	(10141670)	+	G-rich	Low_complexity	1	38	(0)	2771373
21	17.3	0.0	0.0	chr3	190120671	190120711	(8174848)	+	(GCA)n	Simple_repeat	1	41	(0)	2774610
439	27.4	0.9	0.9	chr3	190513381	190513487	(7782072)	C	L2b	LINE/L2	(1)	3374	3268	2775222
12	22.8	4.2	2.0	chr3	192514890	192514937	(5780622)	+	(GGCGCG)n	Simple_repeat	1	50	(0)	2778041
17	0.0	0.0	0.0	chr3	192727463	192727481	(5568078)	+	(T)n	Simple_repeat	1	19	(0)	2778369
17	13.1	0.0	8.2	chr3	192727616	192727664	(5567895)	+	(CCCCCT)n	Simple_repeat	1	49	(0)	2778370
215	34.7	7.5	2.4	chr3	194054540	194054793	(4240766)	C	L2b	LINE/L2	(94)	3281	3014	2780447
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
610	28.2	13.2	1.8	chr3	194333041	194333440	(3962119)	C	MER20B	DNA/hAT-Charlie	(10)	773	321	2780947
374	31.5	10.0	7.5	chr3	195806188	195806616	(2488943)	+	L2a	LINE/L2	2986	3426	(0)	2783658
384	22.7	0.0	0.0	chr3	195806723	195806797	(2488762)	+	MIR3	SINE/MIR	37	111	(97)	2783659
252	33.3	1.1	1.1	chr3	195806788	195806878	(2488681)	+	L2c	LINE/L2	3279	3369	(18)	2783660
848	17.3	4.9	0.6	chr3	195915338	195915483	(2380076)	+	AluJo	SINE/Alu	141	294	(18)	2783837
1311	26.4	8.0	1.9	chr3	196665885	196666367	(1629192)	+	LTR33	LTR/ERVL	1	515	(0)	2785503
16	0.0	0.0	0.0	chr3	197555249	197555268	(740291)	+	(GGA)n	Simple_repeat	1	20	(0)	2787121
284	31.6	2.9	1.4	chr3	197555315	197555452	(740107)	+	MIR3	SINE/MIR	23	162	(46)	2787122
12	13.5	0.0	7.9	chr3	197556173	197556210	(739349)	+	G-rich	Low_complexity	1	38	(0)	2787123
357	24.0	12.6	1.2	chr3	197580655	197580878	(714681)	+	L1ME4b	LINE/L1	352	548	(376)	2787151
15	24.0	3.2	3.1	chr4	336809	336870	(189877685)	+	G-rich	Low_complexity	1	64	(0)	2788953
43	30.8	0.8	0.0	chr4	337403	337532	(189877023)	+	(TG)n	Simple_repeat	1	131	(0)	2788954
316	34.1	2.1	3.2	chr4	1309096	1309283	(188905272)	C	HAL1ME	LINE/L1	(642)	1823	1638	2790107
15	28.6	1.6	1.6	chr4	2262201	2262261	(187952294)	+	G-rich	Low_complexity	1	62	(0)	2791327
24	25.1	4.9	1.9	chr4	2792973	2793074	(187421481)	+	G-rich	Low_complexity	1	107	(0)	2792250
13	12.7	0.0	0.0	chr4	2934848	2934873	(187279682)	+	(GCCAC)n	Simple_repeat	1	26	(0)	2792456
15	7.8	0.0	6.5	chr4	3481100	3481130	(186733425)	+	(AGG)n	Simple_repeat	1	31	(0)	2793211
193	27.4	5.8	3.4	chr4	3791967	3792083	(186422472)	C	L2	LINE/L2	(870)	2549	2430	2793620
52	2.1	0.0	0.0	chr4	5891165	5891213	(184323342)	+	(CA)n	Simple_repeat	1	49	(0)	2797368
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
223	31.0	0.0	0.0	chr4	7335709	7335766	(182878789)	C	MIRc	SINE/MIR	(120)	148	91	2800009
12	18.1	0.0	3.0	chr4	14196473	14196505	(176018050)	+	(AATTT)n	Simple_repeat	1	33	(0)	2810573
20	20.4	0.0	0.0	chr4	15002457	15002501	(175212054)	+	(GCG)n	Simple_repeat	1	45	(0)	2811954
1813	14.6	0.6	3.4	chr4	15702669	15702989	(174511566)	C	AluJb	SINE/Alu	(0)	312	1	2813091
24	18.4	0.0	0.0	chr4	15703171	15703219	(174511336)	+	(GCT)n	Simple_repeat	1	49	(0)	2813092
15	20.3	0.0	8.3	chr4	17781784	17781843	(172432712)	+	(GGACAG)n	Simple_repeat	1	60	(0)	2816919
22	27.2	1.4	2.8	chr4	24584565	24584635	(165629920)	+	(GC)n	Simple_repeat	1	72	(0)	2827351
17	4.0	3.9	0.0	chr4	25233912	25233937	(164980618)	+	(GCC)n	Simple_repeat	1	27	(0)	2828550
14	15.9	0.0	0.0	chr4	25234217	25234244	(164980311)	+	GA-rich	Low_complexity	1	28	(0)	2828551
292	30.4	3.3	2.6	chr4	26030358	26030509	(164184046)	C	LTR81B	LTR/Gypsy	(1121)	272	120	2830246
15	14.2	10.6	0.0	chr4	26860767	26860813	(163353742)	+	(GCG)n	Simple_repeat	1	52	(0)	2831734
16	0.0	0.0	0.0	chr4	26860925	26860942	(163353613)	+	(T)n	Simple_repeat	1	18	(0)	2831735
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
230	30.5	1.2	2.4	chr4	39978428	39978511	(150236044)	+	MER5A	DNA/hAT-Charlie	2	84	(105)	2850914
12	19.9	0.0	0.0	chr4	40056774	40056802	(150157753)	+	(CCCG)n	Simple_repeat	1	29	(0)	2851169
14	13.4	2.1	8.2	chr4	40857167	40857214	(149357341)	+	(CGCC)n	Simple_repeat	1	49	(0)	2852979
25	11.8	0.0	0.0	chr4	41216414	41216450	(148998105)	+	(G)n	Simple_repeat	1	37	(0)	2853655
20	25.4	1.6	1.6	chr4	41216451	41216462	(148998093)	+	(GCG)n	Simple_repeat	32	64	(0)	2853654
2171	18.9	8.9	3.3	chr4	44056788	44057302	(146157253)	+	LTR35A	LTR/ERV1	1	547	(0)	2857763
20	28.4	2.4	2.3	chr4	44447923	44448006	(145766549)	+	(CGC)n	Simple_repeat	1	86	(0)	2858300
19	32.0	1.2	1.2	chr4	44449185	44449264	(145765291)	+	(TCCC)n	Simple_repeat	1	81	(0)	2858302
257	29.5	10.3	1.4	chr4	47464079	47464143	(142750412)	C	MIR	SINE/MIR	(90)	172	94	2862290
13	23.3	0.0	2.4	chr4	48269813	48269854	(141944701)	+	(GAGCCCA)n	Simple_repeat	1	42	(0)	2863589
22	31.4	3.0	2.9	chr4	48269850	48269981	(141944574)	+	(CGCCC)n	Simple_repeat	1	136	(0)	2863590
21	18.9	2.1	0.0	chr4	52038234	52038281	(138176274)	+	(GCC)n	Simple_repeat	1	49	(0)	2865622
12	22.4	0.0	2.6	chr4	52751641	52751678	(137462877)	+	G-rich	Low_complexity	1	38	(0)	2866702
10005	23.5	4.0	6.1	chr4	54986006	54987827	(135226728)	+	L1MA4A	LINE/L1	719	2471	(5095)	2870193
12	10.9	0.0	8.6	chr4	56821734	56821768	(133392787)	+	G-rich	Low_complexity	1	35	(0)	2873371
533	18.1	0.0	0.0	chr4	56845380	56845473	(133369082)	+	AluJr	SINE/Alu	210	303	(9)	2873434
3444	22.0	6.4	2.7	chr4	61517138	61518029	(128696526)	+	Charlie17b	DNA/hAT-Charlie	43	969	(235)	2879532
25079	5.8	0.6	1.1	chr4	61754619	61760805	(128453750)	C	L1PA4	LINE/L1	(0)	6155	1	2879842
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
29	32.6	0.8	1.6	chr4	73258540	73258660	(116955895)	+	(GCC)n	Simple_repeat	1	122	(0)	2894656
27	20.4	1.6	0.0	chr4	73258763	73258824	(116955731)	+	(GCC)n	Simple_repeat	1	63	(0)	2894657
23	25.4	1.4	1.4	chr4	73258825	73258834	(116955721)	+	(GCCACC)n	Simple_repeat	1	73	(0)	2894658
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
188	28.3	3.2	0.0	chr4	73259540	73259599	(116954956)	+	MIR3	SINE/MIR	112	173	(35)	2894660
16	14.5	5.3	0.0	chr4	73998498	73998535	(116216020)	+	(CAG)n	Simple_repeat	1	40	(0)	2895598
13	19.6	2.2	4.3	chr4	74158303	74158347	(116056208)	+	(GGTGGC)n	Simple_repeat	1	46	(0)	2895789
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
236	14.7	6.2	17.6	chr4	83284965	83285055	(106929500)	C	LTR54	LTR/ERV1	(0)	510	431	2909222
19	19.5	3.2	3.1	chr4	83334720	83334781	(106879774)	+	(CAGCAG)n	Simple_repeat	1	64	(0)	2909319
17	20.9	2.9	5.7	chr4	83334900	83334967	(106879588)	+	(CCTC)n	Simple_repeat	1	70	(0)	2909320
15	15.8	4.5	2.2	chr4	86359868	86359911	(103854644)	+	A-rich	Low_complexity	1	46	(0)	2913715
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
3016	16.3	1.5	0.0	chr4	87679947	87680480	(102534075)	+	MER34	LTR/ERV1	1	542	(0)	2915914
16	19.6	0.0	0.0	chr4	88697679	88697713	(101516842)	+	(CCG)n	Simple_repeat	1	35	(0)	2917575
16	23.3	2.2	0.0	chr4	89307845	89307889	(100906666)	+	(GCC)n	Simple_repeat	1	46	(0)	2918454
5390	15.8	2.2	0.3	chr4	89640644	89641493	(100573062)	+	LTR1D	LTR/ERV1	1	866	(109)	2918926
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
3302	27.6	5.5	5.6	chr4	92255532	92257526	(97957029)	C	L1M2	LINE/L1	(4787)	2062	10	2922047
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
3275	22.4	6.4	6.3	chr4	92520063	92520954	(97693601)	C	HERVL-int	LTR/ERVL	(0)	5654	4762	2922382
4201	12.6	1.0	0.0	chr4	92600563	92601173	(97613382)	C	L1PA10	LINE/L1	(5205)	1148	532	2922494
844	25.3	11.1	5.4	chr4	98626335	98626986	(91587569)	+	L2a	LINE/L2	2735	3426	(0)	2930419
13	27.6	5.6	1.3	chr4	98995966	98996036	(91218519)	+	(CTC)n	Simple_repeat	1	75	(0)	2931109
23214	8.2	0.9	0.5	chr4	100862789	100868930	(89345625)	C	L1PA6	LINE/L1	(0)	6154	7	2933605
205	28.6	2.5	0.0	chr4	103198061	103198137	(87016418)	C	MIR3	SINE/MIR	(16)	192	114	2936744
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
234	19.1	0.0	0.0	chr4	105474368	105474409	(84740146)	C	L2a	LINE/L2	(22)	3404	3363	2939524
617	30.7	20.7	0.3	chr4	112655581	112655933	(77558622)	C	L2a	LINE/L2	(5)	3421	2978	2949541
1806	15.6	0.0	3.6	chr4	112759144	112759444	(77455111)	C	AluJr	SINE/Alu	(22)	290	1	2949812
4772	9.4	0.5	0.0	chr4	113269090	113269738	(76944817)	C	L1PA7	LINE/L1	(5809)	652	1	2950604
4739	17.4	1.3	3.5	chr4	114399064	114399933	(75814622)	C	LTR1D	LTR/ERV1	(143)	832	1	2952013
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
17	21.4	10.2	1.0	chr4	118033558	118033645	(72180910)	+	G-rich	Low_complexity	1	97	(0)	2956363
1885	11.3	0.0	0.0	chr4	118278166	118278404	(71936151)	C	AluSz	SINE/Alu	(73)	239	1	2956658
340	11.4	0.0	0.0	chr4	118591591	118591662	(71622893)	C	AluSc	SINE/Alu	(0)	309	236	2957168
238	31.6	0.0	2.6	chr4	118669435	118669512	(71545043)	+	MamRep605	LTR?	108	183	(666)	2957330
803	34.5	2.9	2.7	chr4	118669565	118669972	(71544583)	+	MamRep605	LTR?	341	749	(100)	2957330
302	33.2	7.4	7.1	chr4	118835728	118836038	(71378517)	+	L1M4b	LINE/L1	210	521	(6346)	2957575
28	11.8	0.0	0.0	chr4	119628600	119628645	(70585910)	+	(CTG)n	Simple_repeat	1	46	(0)	2958741
20	12.0	0.0	2.6	chr4	119628968	119629005	(70585550)	+	(GGC)n	Simple_repeat	1	38	(0)	2958742
6661	18.8	5.8	1.5	chr4	120003749	120005302	(70209253)	+	L1M3f	LINE/L1	1239	2861	(4704)	2959247
14	13.1	11.5	1.7	chr4	121823742	121823793	(68390762)	+	(CAGCC)n	Simple_repeat	1	58	(0)	2961635
404	15.6	4.2	3.2	chr4	123304532	123304624	(66909931)	C	UCON68	Unknown	(34)	98	5	2963758
270	33.3	6.2	2.0	chr4	124636743	124636941	(65577614)	C	MamRTE1	LINE/RTE-BovB	(113)	3699	3492	2965534
1882	28.9	0.8	10.5	chr4	126582163	126582893	(63631662)	+	L1PA17	LINE/L1	6	664	(6209)	2967980
422	36.4	4.0	0.8	chr4	126582964	126583207	(63631348)	+	L1PA15-16	LINE/L1	698	949	(5901)	2967981
3063	27.7	5.3	6.9	chr4	126583205	126584351	(63630204)	+	L1PA15-16	LINE/L1	791	2010	(5139)	2967981
4874	17.4	5.2	1.4	chr4	133584037	133584900	(56629655)	+	LTR1D1	LTR/ERV1	1	899	(0)	2977149
1539	26.0	3.9	5.2	chr4	133585016	133585590	(56628965)	+	MER52-int	LTR/ERV1	75	599	(6492)	2977150
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
12	16.8	0.0	5.4	chr4	141220665	141220701	(48993854)	+	(TTCCTT)n	Simple_repeat	1	37	(0)	2987428
23	7.2	0.0	0.0	chr4	143512997	143513026	(46701529)	+	(A)n	Simple_repeat	1	30	(0)	2990415
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
295	26.9	12.3	3.9	chr4	151099121	151099275	(39115280)	C	MIRb	SINE/MIR	(72)	196	27	3000859
217	25.0	15.1	0.0	chr4	152045679	152045774	(38168781)	C	MIR3	SINE/MIR	(77)	131	19	3002374
27	6.1	0.0	0.0	chr4	152535997	152536031	(37678524)	+	(CAGCGG)n	Simple_repeat	1	35	(0)	3003140
7488	17.7	11.6	4.6	chr4	152539540	152541503	(37673052)	C	MER52D	LTR/ERV1	(0)	2123	6	3003145
2336	18.6	8.4	0.4	chr4	152808318	152808716	(37405839)	C	L1ME3	LINE/L1	(324)	5838	5421	3003613
1770	13.9	7.6	1.5	chr4	152808788	152809060	(37405495)	+	AluSx	SINE/Alu	2	292	(20)	3003616
13	21.9	0.0	2.6	chr4	153344509	153344553	(36870002)	+	(CCCCAG)n	Simple_repeat	1	43	(0)	3004473
11	27.0	3.6	1.8	chr4	153344683	153344737	(36869818)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3004474
462	18.4	3.3	0.0	chr4	153759265	153759351	(36455204)	+	MER5A	DNA/hAT-Charlie	97	186	(3)	3005150
14	34.5	3.2	2.1	chr4	153759521	153759613	(36454942)	+	GA-rich	Low_complexity	1	96	(0)	3005151
293	31.9	2.1	3.1	chr4	153790119	153790215	(36424340)	C	L2b	LINE/L2	(29)	3346	3251	3005189
259	16.4	9.0	0.0	chr4	153792265	153792325	(36422230)	C	MIR	SINE/MIR	(134)	128	62	3005190
440	26.4	17.9	1.0	chr4	158723613	158723807	(31490748)	+	MIRb	SINE/MIR	34	268	(0)	3011786
329	34.2	19.2	1.4	chr4	161393584	161393998	(28820557)	C	LTR33	LTR/ERVL	(0)	515	10	3015272
2328	8.3	0.3	0.3	chr4	163167011	163167299	(27047256)	+	AluSg	SINE/Alu	1	289	(21)	3017677
11	12.4	0.0	11.4	chr4	166501899	166501942	(23712613)	+	A-rich	Low_complexity	1	44	(0)	3022459
4488	21.1	3.8	1.9	chr4	166502018	166503223	(23711332)	C	L1PA17	LINE/L1	(5558)	1315	2	3022460
13	20.2	2.0	5.8	chr4	168832071	168832121	(21382434)	+	(CCCGCT)n	Simple_repeat	1	52	(0)	3025411
39	0.0	0.0	2.6	chr4	173074848	173074885	(17139670)	+	(AC)n	Simple_repeat	1	38	(0)	3031095
752	30.6	9.4	1.4	chr4	173936918	173937404	(16277151)	+	L2a	LINE/L2	2881	3421	(5)	3032299
6943	17.9	6.3	3.1	chr4	176342381	176343739	(13870816)	C	MER52A	LTR/ERV1	(1)	1754	349	3035421
926	28.4	8.2	5.9	chr4	182764284	182764725	(7449830)	C	L2c	LINE/L2	(2)	3385	2933	3043873
13	9.3	0.0	0.0	chr4	182917481	182917503	(7297052)	+	(GGGA)n	Simple_repeat	1	23	(0)	3044079
11	21.1	8.2	0.0	chr4	182917532	182917580	(7296975)	+	(TCCGCGG)n	Simple_repeat	1	53	(0)	3044080
13	5.3	0.0	0.0	chr4	182917732	182917751	(7296804)	+	(TGG)n	Simple_repeat	1	20	(0)	3044081
23	23.3	1.7	0.0	chr4	183099190	183099258	(7115297)	+	GA-rich	Low_complexity	1	70	(0)	3044388
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
14	9.3	0.0	0.0	chr4	184734032	184734054	(5480501)	+	(GCC)n	Simple_repeat	1	23	(0)	3047089
220	29.6	7.5	0.0	chr4	184734489	184734586	(5479969)	+	MIR3	SINE/MIR	46	151	(57)	3047090
932	16.5	2.9	0.0	chr4	184734627	184734796	(5479759)	+	L1M3	LINE/L1	4932	5106	(1034)	3047091
21	9.2	0.0	2.7	chr4	185890949	185890985	(4323570)	+	(TGAA)n	Simple_repeat	1	37	(0)	3048877
2455	8.3	0.3	0.0	chr4	186028607	186028906	(4185649)	+	AluY	SINE/Alu	1	301	(10)	3049096
4860	14.3	1.6	3.6	chr4	186028907	186029371	(4185184)	+	MER4D	LTR/ERV1	451	892	(11)	3049093
179	32.9	0.0	0.0	chr4	188029056	188029604	(2184951)	+	(TG)n	Simple_repeat	1	549	(0)	3051843
392	30.9	10.7	0.8	chr4	188108009	188108253	(2106302)	+	L2	LINE/L2	2050	2321	(1098)	3052028
197	24.3	3.9	6.3	chr4	188108271	188108349	(2106206)	+	L2	LINE/L2	2396	2472	(947)	3052028
273	32.0	10.4	0.7	chr4	189033891	189034038	(1180517)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	382	3053403
270	33.6	0.0	0.0	chr4	189034139	189034242	(1180313)	C	MLT1H	LTR/ERVL-MaLR	(379)	170	67	3053403
3920	21.4	2.5	0.2	chr5	350771	351753	(181186506)	+	L1MB5	LINE/L1	5164	6172	(2)	3055357
490	17.8	1.2	0.4	chr5	426194	427129	(181111130)	+	(ATGG)n	Simple_repeat	1	947	(0)	3055416
4853	15.8	1.1	1.9	chr5	591134	592528	(180945731)	C	L1PBa1	LINE/L1	(4640)	2318	825	3055551
27	14.6	7.4	2.3	chr5	1246817	1246897	(180291362)	+	(TCCCTCC)n	Simple_repeat	1	87	(0)	3056077
272	17.5	1.7	0.0	chr5	1316513	1316569	(180221690)	+	MER88	LTR/ERVL	4	61	(403)	3056136
236	20.0	1.4	2.8	chr5	1316592	1316663	(180221596)	+	MER88	LTR/ERVL	148	218	(246)	3056136
109	19.5	0.7	5.0	chr5	2038871	2039165	(179499094)	+	G-rich	Low_complexity	1	297	(0)	3056891
466	27.9	3.2	0.0	chr5	2634650	2634771	(178903488)	C	MER63B	DNA/hAT-Blackjack	(31)	405	280	3057506
13	13.6	6.8	4.3	chr5	6633477	6633520	(174904739)	+	(GCC)n	Simple_repeat	1	47	(0)	3062115
26015	3.7	0.2	0.2	chr5	7170549	7176731	(174361528)	+	L1PA3	LINE/L1	2	6155	(0)	3062796
4365	11.2	17.7	23.4	chr5	8840277	8841624	(172696635)	+	LTR12D	LTR/ERV1	1	1254	(0)	3064834
2204	8.9	0.0	0.3	chr5	10628191	10628481	(170909778)	C	AluSq2	SINE/Alu	(23)	290	1	3067261
20894	11.5	1.3	2.7	chr5	11666770	11673042	(169865217)	C	L1PA7	LINE/L1	(0)	6154	28	3068608
7596	13.4	16.0	0.1	chr5	12661735	12663059	(168875200)	+	LTR12C	LTR/ERV1	3	1577	(2)	3069841
11	7.5	6.7	3.1	chr5	13554006	13554035	(167984224)	+	(GCCACA)n	Simple_repeat	1	32	(0)	3070965
16	18.1	4.5	0.0	chr5	13554061	13554104	(167984155)	+	(CAGCGC)n	Simple_repeat	1	46	(0)	3070966
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
301	30.3	4.9	7.2	chr5	15554395	15554561	(165983698)	C	MIRb	SINE/MIR	(8)	260	98	3073725
484	28.6	0.0	0.0	chr5	15554600	15554732	(165983527)	+	MER5A1	DNA/hAT-Charlie	34	166	(0)	3073726
23	20.4	4.3	1.4	chr5	16179074	16179142	(165359117)	+	(GCT)n	Simple_repeat	1	72	(0)	3074628
195	29.1	3.7	3.7	chr5	16933977	16934058	(164604201)	+	MIR3	SINE/MIR	93	174	(34)	3075810
238	21.7	1.6	7.7	chr5	16934328	16934392	(164603867)	+	Charlie24	DNA/hAT-Charlie	2390	2450	(0)	3075811
3697	6.9	1.4	0.0	chr5	25448438	25448929	(156089330)	C	MER9B	LTR/ERVK	(0)	499	1	3087344
3499	14.1	12.3	1.7	chr5	25857864	25858314	(155679945)	+	LTR1B1	LTR/ERV1	355	817	(1)	3087851
1405	20.9	4.5	1.9	chr5	25858315	25858758	(155679501)	+	MER31-int	LTR/ERV1	2991	3792	(1144)	3087854
15	15.9	2.9	0.0	chr5	35618094	35618128	(145920131)	+	(AGCGC)n	Simple_repeat	1	36	(0)	3101645
1136	9.2	9.4	0.0	chr5	37378943	37379106	(144159153)	+	AluSx	SINE/Alu	121	301	(11)	3104396
12	19.5	2.9	0.0	chr5	38846052	38846086	(142692173)	+	(CGCCCCG)n	Simple_repeat	1	36	(0)	3106772
14	11.2	3.5	0.0	chr5	43121157	43121185	(138417074)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3112576
255	40.2	1.2	0.6	chr5	45109678	45109837	(136428422)	+	MamRTE1	LINE/RTE-BovB	3184	3344	(468)	3115165
31	3.3	0.0	0.0	chr5	52989806	52989836	(128548423)	+	(AC)n	Simple_repeat	1	31	(0)	3119684
13	26.3	0.0	5.5	chr5	54518246	54518300	(127019959)	+	(GCC)n	Simple_repeat	1	55	(0)	3121857
13	8.7	0.0	14.0	chr5	56909853	56909902	(124628357)	+	G-rich	Low_complexity	1	50	(0)	3125753
17	8.6	5.1	2.4	chr5	59127601	59127639	(122410620)	+	(CCCCACC)n	Simple_repeat	1	41	(0)	3129093
15	14.4	3.1	0.0	chr5	59893925	59893956	(121644303)	+	(TCCT)n	Simple_repeat	1	33	(0)	3130140
11	24.9	0.0	0.0	chr5	59893997	59894030	(121644229)	+	(GCAGCA)n	Simple_repeat	1	34	(0)	3130141
21	0.0	0.0	0.0	chr5	61409072	61409094	(120129165)	+	(T)n	Simple_repeat	1	23	(0)	3132228
12	13.7	0.0	0.0	chr5	61625835	61625858	(119912401)	+	(GCGG)n	Simple_repeat	1	24	(0)	3132552
27	18.4	3.9	2.5	chr5	65035559	65035636	(116502623)	+	(GGAGGCG)n	Simple_repeat	1	81	(0)	3137271
404	18.9	13.2	1.5	chr5	65036021	65036154	(116502105)	C	L1ME4a	LINE/L1	(0)	6124	5973	3137272
27476	3.2	0.3	0.0	chr5	65370263	65376273	(116161986)	+	L1PA3	LINE/L1	125	6154	(1)	3137726
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
274	24.4	24.2	0.0	chr5	69166597	69166715	(112371544)	+	MIRc	SINE/MIR	78	234	(34)	3143406
15	12.4	2.6	5.0	chr5	71455695	71455733	(110082526)	+	(GCG)n	Simple_repeat	1	40	(0)	3147474
308	29.4	1.2	0.0	chr5	72063562	72063646	(109474613)	C	MIR3	SINE/MIR	(3)	205	120	3148441
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
12	0.0	8.0	3.7	chr5	75511355	75511379	(106026880)	+	(CCG)n	Simple_repeat	1	27	(0)	3153647
13	8.8	0.0	3.9	chr5	75511436	75511461	(106026798)	+	(GCC)n	Simple_repeat	1	26	(0)	3153648
12	19.5	2.6	2.6	chr5	75511521	75511558	(106026701)	+	A-rich	Low_complexity	1	39	(0)	3153649
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
11	24.6	0.0	2.5	chr5	76818919	76818958	(104719301)	+	(GCGGAGG)n	Simple_repeat	1	40	(0)	3155688
14	20.1	2.0	4.0	chr5	76818945	76818993	(104719266)	+	G-rich	Low_complexity	1	50	(0)	3155689
12	18.9	0.0	7.1	chr5	79236030	79236071	(102302188)	+	(CGC)n	Simple_repeat	1	42	(0)	3159397
11	12.8	8.7	4.0	chr5	79991100	79991145	(101547114)	+	(CCTGCGC)n	Simple_repeat	1	50	(0)	3160666
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
12	27.1	0.0	2.2	chr5	90529746	90529791	(91008468)	+	G-rich	Low_complexity	1	46	(0)	3174919
14	17.2	3.9	5.7	chr5	98773867	98773917	(82764342)	+	(GCT)n	Simple_repeat	1	53	(0)	3185541
14	21.5	7.6	1.4	chr5	98773918	98773927	(82764332)	+	(CGCTGCG)n	Simple_repeat	81	105	(0)	3185540
17	30.2	1.2	2.5	chr5	98773973	98774052	(82764207)	+	(GCCCGC)n	Simple_repeat	1	81	(0)	3185542
21	28.1	2.4	1.2	chr5	98774097	98774179	(82764080)	+	(CGCTGC)n	Simple_repeat	1	85	(0)	3185543
13	20.8	7.8	3.6	chr5	102296361	102296437	(79241822)	+	(AGCCTCC)n	Simple_repeat	1	83	(0)	3189947
5495	20.1	5.0	1.3	chr5	102561733	102563830	(78974429)	+	L1MA4	LINE/L1	1238	3399	(4166)	3190295
18	12.0	0.0	0.0	chr5	103562811	103562837	(77975422)	+	(G)n	Simple_repeat	1	27	(0)	3191611
12	22.9	1.7	6.8	chr5	107670654	107670711	(73867548)	+	G-rich	Low_complexity	1	59	(0)	3196630
15	16.9	0.0	0.0	chr5	108381811	108381837	(73156422)	+	(CA)n	Simple_repeat	1	27	(0)	3197553
12	9.8	0.0	0.0	chr5	108381945	108381966	(73156293)	+	(GCGA)n	Simple_repeat	1	22	(0)	3197554
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
20	30.0	3.5	0.0	chr5	109689790	109689874	(71848385)	+	(GCG)n	Simple_repeat	1	88	(0)	3199330
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
15	24.9	0.0	0.0	chr5	111758220	111758253	(69780006)	+	(CA)n	Simple_repeat	1	34	(0)	3201828
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
13	5.2	0.0	0.0	chr5	114362181	114362200	(67176059)	+	(GCC)n	Simple_repeat	1	20	(0)	3205506
17	19.0	1.6	6.5	chr5	114362253	114362313	(67175946)	+	(CCCGCA)n	Simple_repeat	1	62	(0)	3205507
12	20.8	0.0	2.9	chr5	115169937	115169971	(66368288)	+	G-rich	Low_complexity	1	35	(0)	3206387
12	13.9	0.0	0.0	chr5	115180302	115180325	(66357934)	+	(GGC)n	Simple_repeat	1	24	(0)	3206402
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
58	22.1	1.5	8.4	chr5	115296655	115296913	(66241346)	+	G-rich	Low_complexity	1	263	(0)	3206588
775	5.9	0.0	1.0	chr5	115626287	115626387	(65911872)	C	AluSz6	SINE/Alu	(0)	312	213	3207058
2325	9.5	12.0	0.8	chr5	116559248	116559608	(64978651)	+	MER48	LTR/ERV1	1	407	(0)	3208272
353	33.3	0.7	0.0	chr5	116559703	116559852	(64978407)	+	L2b	LINE/L2	2503	2653	(766)	3208273
1521	25.0	7.7	5.3	chr5	116948068	116948637	(64589622)	C	L1MCc	LINE/L1	(5817)	606	22	3208918
12	18.1	0.0	3.0	chr5	118443336	118443368	(63094891)	+	GA-rich	Low_complexity	1	33	(0)	3210844
2277	10.8	1.3	0.0	chr5	118443478	118443773	(63094486)	+	AluSg	SINE/Alu	1	300	(10)	3210845
26945	4.1	0.1	0.3	chr5	120831426	120836963	(60701296)	+	L1PA3	LINE/L1	1	5527	(628)	3213977
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
242	30.5	8.7	4.0	chr5	124468658	124468855	(57069404)	C	LFSINE_Vert	SINE/tRNA	(8)	451	244	3218688
1809	20.1	11.1	2.4	chr5	125540300	125540932	(55997327)	C	L1M4	LINE/L1	(6345)	1172	663	3220170
2037	19.1	5.8	2.4	chr5	125540936	125541402	(55996857)	C	LTR53B	LTR/ERVL	(0)	533	50	3220171
359	22.6	23.0	0.0	chr5	126009760	126009923	(55528336)	C	MLT1L	LTR/ERVL-MaLR	(397)	213	1	3220668
1239	29.5	6.0	2.5	chr5	126009924	126010650	(55527609)	+	L1MEh	LINE/L1	1051	1804	(431)	3220669
14	8.1	9.8	2.2	chr5	126777769	126777809	(54760450)	+	(CGACGCG)n	Simple_repeat	1	45	(0)	3221960
17	12.5	0.0	0.0	chr5	126778227	126778260	(54759999)	+	(GC)n	Simple_repeat	1	34	(0)	3221961
23	17.1	0.0	0.0	chr5	129461452	129461497	(52076762)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	3225348
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
11	25.6	0.0	2.5	chr5	132830657	132830696	(48707563)	+	(GGCTCC)n	Simple_repeat	1	40	(0)	3229982
16	27.0	2.9	2.8	chr5	133612580	133612649	(47925610)	+	(CCCG)n	Simple_repeat	1	72	(0)	3231171
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
2253	10.0	0.4	0.0	chr5	135929725	135930003	(45608256)	+	AluSp	SINE/Alu	1	280	(33)	3234977
17	13.0	0.0	2.8	chr5	135930280	135930315	(45607944)	+	G-rich	Low_complexity	1	36	(0)	3234978
13	10.8	6.7	0.0	chr5	136132815	136132844	(45405415)	+	(CCTC)n	Simple_repeat	1	32	(0)	3235278
53	0.0	0.0	0.0	chr5	136365687	136365731	(45172528)	+	(CA)n	Simple_repeat	1	45	(0)	3235573
15	23.0	0.0	0.0	chr5	138274334	138274382	(43263877)	+	(GCA)n	Simple_repeat	1	49	(0)	3238522
16	24.6	5.3	2.5	chr5	138274383	138274406	(43263853)	+	(CAGCGG)n	Simple_repeat	4	80	(0)	3238523
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
14	12.0	0.0	3.5	chr5	138464200	138464228	(43074031)	+	GA-rich	Low_complexity	1	29	(0)	3238914
17	21.3	4.1	0.0	chr5	138543114	138543162	(42995097)	+	(GGC)n	Simple_repeat	1	51	(0)	3239069
279	32.4	7.5	0.0	chr5	139518461	139518596	(42019663)	+	MIRb	SINE/MIR	77	223	(45)	3240926
24	17.4	7.6	1.2	chr5	140042801	140042879	(41495380)	+	(GCGGCT)n	Simple_repeat	1	85	(0)	3241897
64	5.7	2.1	2.1	chr5	140042904	140042998	(41495261)	+	(TGC)n	Simple_repeat	1	97	(0)	3241898
17	13.7	0.0	0.0	chr5	140043211	140043266	(41494993)	+	(GCAGC)n	Simple_repeat	1	56	(0)	3241899
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
3668	9.8	3.6	3.0	chr5	141455328	141455856	(40082403)	C	LTR9B	LTR/ERV1	(83)	561	28	3244009
1061	26.6	7.0	2.6	chr5	142205651	142206071	(39332188)	+	HERV16-int	LTR/ERVL	490	930	(4296)	3245445
996	24.9	6.8	3.6	chr5	142206105	142206433	(39331826)	+	HERV16-int	LTR/ERVL	1009	1348	(3878)	3245445
591	18.2	7.4	0.0	chr5	142863686	142863822	(38674437)	+	MER5A1	DNA/hAT-Charlie	15	162	(4)	3246795
1288	19.4	13.9	0.2	chr5	143037416	143037832	(38500427)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	27	3247091
280	25.0	0.0	8.1	chr5	146424971	146425057	(35113202)	+	MLT1M	LTR/ERVL-MaLR	157	236	(436)	3252562
655	28.4	11.8	5.6	chr5	146425062	146425419	(35112840)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	228	3252563
35	0.0	0.0	0.0	chr5	146878728	146878759	(34659500)	+	(GCT)n	Simple_repeat	1	32	(0)	3253334
37	0.0	0.0	0.0	chr5	147452439	147452470	(34085789)	+	(AC)n	Simple_repeat	1	32	(0)	3254261
14	18.2	0.0	0.0	chr5	147510016	147510046	(34028213)	+	(AGCC)n	Simple_repeat	1	31	(0)	3254369
15	18.2	4.3	2.1	chr5	147510195	147510240	(34028019)	+	(GCGCAC)n	Simple_repeat	1	48	(0)	3254370
1375	19.2	0.5	16.9	chr5	147869080	147869575	(33668684)	C	MER61-int	LTR/ERV1	(4742)	475	62	3254970
18	17.9	0.0	0.0	chr5	151447684	151447722	(30090537)	+	(AGCCGG)n	Simple_repeat	1	39	(0)	3261885
17	0.0	4.2	0.0	chr5	151686871	151686894	(29851365)	+	(GGCA)n	Simple_repeat	1	25	(0)	3262394
20	17.9	1.6	6.2	chr5	151686990	151687053	(29851206)	+	(CTC)n	Simple_repeat	1	65	(0)	3262395
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
1961	11.3	6.1	0.7	chr5	154691799	154692091	(26846168)	C	AluSx	SINE/Alu	(2)	310	1	3267797
360	35.4	2.2	8.9	chr5	154712326	154712573	(26825686)	+	MIRb	SINE/MIR	1	231	(37)	3267857
500	26.2	1.5	14.4	chr5	154722617	154722678	(26815581)	C	MIR3	SINE/MIR	(3)	205	155	3267883
2419	9.9	0.0	0.0	chr5	154722679	154722980	(26815279)	C	AluSx	SINE/Alu	(10)	302	1	3267884
500	26.2	1.5	14.4	chr5	154722981	154723153	(26815106)	C	MIR3	SINE/MIR	(54)	154	1	3267883
2099	17.0	6.7	5.3	chr5	156800733	156801340	(24736919)	C	MER4CL34	LTR/ERV1	(0)	765	1	3271391
290	28.1	6.0	4.3	chr5	158013456	158013595	(23524664)	C	UCON132b	DNA/hAT-Tip100	(62)	243	21	3273843
324	28.6	7.3	8.1	chr5	158312911	158313157	(23225102)	+	MIRc	SINE/MIR	17	261	(7)	3274398
2303	9.2	0.0	2.7	chr5	160008560	160008851	(21529408)	+	AluJb	SINE/Alu	1	284	(28)	3277188
59	0.0	0.0	0.0	chr5	160008852	160008904	(21529355)	+	(AAAT)n	Simple_repeat	1	53	(0)	3277189
19	14.1	2.6	0.0	chr5	160119164	160119202	(21419057)	+	(CGG)n	Simple_repeat	1	40	(0)	3277394
13	31.6	3.2	0.0	chr5	160119325	160119386	(21418873)	+	(CGC)n	Simple_repeat	1	64	(0)	3277395
15	24.9	5.9	1.4	chr5	160287744	160287811	(21250448)	+	(AGGC)n	Simple_repeat	1	72	(0)	3277852
12	20.9	0.0	4.8	chr5	160312606	160312647	(21225612)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	3277908
22	27.1	0.0	0.0	chr5	160312917	160312970	(21225289)	+	(TT)n	Simple_repeat	1	54	(0)	3277909
14	0.0	0.0	0.0	chr5	160370447	160370464	(21167795)	+	(TCC)n	Simple_repeat	1	18	(0)	3278046
479	32.0	7.9	3.9	chr5	160477017	160477353	(21060906)	+	L2b	LINE/L2	3026	3375	(0)	3278234
223	27.9	9.8	1.8	chr5	160477446	160477558	(21060701)	+	L2c	LINE/L2	3264	3386	(1)	3278235
699	19.2	6.3	2.6	chr5	160477915	160478126	(21060133)	+	MER106B	DNA/hAT-Charlie	905	1055	(4)	3278236
11	9.9	5.6	5.3	chr5	163437836	163437871	(18100388)	+	(GGTGCG)n	Simple_repeat	1	38	(0)	3282556
363	27.0	23.2	1.8	chr5	163460873	163461098	(18077161)	C	L2a	LINE/L2	(14)	3412	3124	3282584
400	19.1	5.0	7.8	chr5	168311487	168311588	(13226671)	+	MIRc	SINE/MIR	60	158	(110)	3289765
18	0.0	0.0	0.0	chr5	168528570	168528589	(13009670)	+	(TC)n	Simple_repeat	1	20	(0)	3290249
41	19.6	4.0	5.7	chr5	168528789	168528940	(13009319)	+	(TTCTT)n	Simple_repeat	1	158	(0)	3290250
23	5.5	2.5	2.4	chr5	168529354	168529400	(13008859)	+	(CCGCCCG)n	Simple_repeat	1	47	(0)	3290251
205	25.4	9.5	0.0	chr5	170393280	170393346	(11144913)	C	X7C_LINE	LINE/CR1	(85)	151	78	3293515
513	25.4	1.4	2.7	chr5	170639874	170640023	(10898236)	C	MLT1J	LTR/ERVL-MaLR	(69)	443	296	3294017
12	19.0	7.1	0.0	chr5	170744230	170744271	(10793988)	+	(GGATG)n	Simple_repeat	1	45	(0)	3294227
446	18.3	3.5	0.0	chr5	170744798	170744879	(10793380)	+	MER45A	DNA/hAT-Tip100	60	144	(34)	3294228
248	28.1	10.0	4.9	chr5	170761301	170761442	(10776817)	+	MIRb	SINE/MIR	16	165	(103)	3294255
623	21.1	12.9	1.1	chr5	172478852	172479028	(9059231)	+	MIRb	SINE/MIR	52	252	(16)	3297526
18	7.5	0.0	0.0	chr5	172479217	172479244	(9059015)	+	(CAGA)n	Simple_repeat	1	28	(0)	3297527
198	18.5	8.5	3.0	chr5	172640928	172640994	(8897265)	+	L2b	LINE/L2	3302	3372	(3)	3297895
13	13.2	6.1	0.0	chr5	172641169	172641215	(8897044)	+	(GGAGGC)n	Simple_repeat	1	49	(0)	3297896
19	28.0	0.0	2.9	chr5	172641218	172641285	(8896974)	+	(CCG)n	Simple_repeat	1	68	(0)	3297897
16	15.8	4.5	2.2	chr5	172683572	172683615	(8854644)	+	(GCC)n	Simple_repeat	1	46	(0)	3297973
12	22.4	0.0	2.6	chr5	172771386	172771423	(8766836)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	3298156
394	30.7	12.0	2.8	chr5	176538222	176538432	(4999827)	C	MIRb	SINE/MIR	(30)	238	6	3305484
510	23.2	1.1	0.2	chr5	176591513	176592659	(4945600)	+	(GGT)n	Simple_repeat	1	1160	(0)	3305621
26	31.8	1.6	2.4	chr5	176629970	176630094	(4908165)	+	(ACACGC)n	Simple_repeat	1	127	(0)	3305695
23	21.1	1.4	2.9	chr5	176630193	176630261	(4907998)	+	(CCATCC)n	Simple_repeat	1	70	(0)	3305696
743	31.4	1.7	0.0	chr5	176803898	176804123	(4734136)	+	MIR	SINE/MIR	32	261	(1)	3306025
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
13	22.5	3.6	3.5	chr5	177133968	177134022	(4404237)	+	G-rich	Low_complexity	1	57	(0)	3306742
73	1.2	3.6	1.1	chr5	177371042	177371125	(4167134)	+	(GGGCCG)n	Simple_repeat	1	87	(0)	3307276
211	32.0	13.1	3.5	chr5	177444443	177444832	(4093427)	C	L2c	LINE/L2	(0)	3387	2919	3307429
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
14	24.3	2.0	2.0	chr5	177455933	177455982	(4082277)	+	(GCCCT)n	Simple_repeat	1	51	(0)	3307453
12	13.9	0.0	0.0	chr5	177456202	177456225	(4082034)	+	(GGGA)n	Simple_repeat	1	24	(0)	3307454
15	25.9	1.9	3.6	chr5	178123684	178123737	(3414522)	+	(GT)n	Simple_repeat	1	55	(0)	3308601
3661	16.8	9.8	4.3	chr5	178179579	178180372	(3357887)	C	MER21B	LTR/ERVL	(2)	866	24	3308729
544	26.4	4.9	0.0	chr5	178180377	178180531	(3357728)	C	L2	LINE/L2	(1039)	2380	2218	3308730
1732	17.3	7.1	0.8	chr5	178180544	178180898	(3357361)	+	LTR9D	LTR/ERV1	175	553	(92)	3308731
237	28.3	8.1	0.9	chr5	178204069	178204186	(3334073)	+	MIRc	SINE/MIR	28	150	(118)	3308793
253	30.5	3.5	0.0	chr5	178556059	178556140	(2982119)	+	L1ME4b	LINE/L1	451	535	(357)	3309394
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
2004	11.9	1.1	1.1	chr5	178895422	178895706	(2642553)	C	AluSq2	SINE/Alu	(16)	297	13	3310020
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
5052	15.4	2.7	0.4	chr5	179059219	179060061	(2478198)	+	L1MA4A	LINE/L1	5436	6298	(5)	3310303
29	16.4	4.4	0.0	chr5	179907885	179907952	(1630307)	+	(CGGAG)n	Simple_repeat	1	71	(0)	3311776
13	20.7	3.6	5.2	chr5	180071333	180071388	(1466871)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	3312025
2565	4.7	0.0	0.0	chr5	180493737	180494032	(1044227)	+	AluYk2	SINE/Alu	2	297	(14)	3312777
20	31.7	0.0	3.3	chr5	180494108	180494198	(1044061)	+	GA-rich	Low_complexity	1	91	(0)	3312778
872	9.1	0.0	0.0	chr5	180831998	180832107	(706152)	+	AluSq2	SINE/Alu	192	301	(12)	3313313
734	0.0	0.0	0.0	chr5	181187701	181187782	(350477)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3313822
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
13	14.4	5.0	2.4	chr6	692814	692853	(170113126)	+	G-rich	Low_complexity	1	42	(0)	3315113
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
1519	21.2	2.2	4.6	chr6	1524332	1524697	(169281282)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	1	3316257
15	27.1	4.5	0.0	chr6	3068925	3068990	(167736989)	+	G-rich	Low_complexity	1	69	(0)	3318348
11	26.8	3.6	1.8	chr6	3751244	3751298	(167054681)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3319353
13	13.2	0.0	0.0	chr6	3751561	3751585	(167054394)	+	(CCCG)n	Simple_repeat	1	25	(0)	3319354
14	9.3	0.0	0.0	chr6	4661727	4661749	(166144230)	+	(AGC)n	Simple_repeat	1	23	(0)	3320819
19	10.8	0.0	0.0	chr6	6811688	6811718	(163994261)	+	(GAG)n	Simple_repeat	1	31	(0)	3323954
24	25.3	0.0	0.0	chr6	7727253	7727313	(163078666)	+	(CAG)n	Simple_repeat	1	61	(0)	3325638
1063	11.1	1.4	0.0	chr6	10585200	10585343	(160220636)	C	AluJr	SINE/Alu	(30)	282	137	3329791
13	16.2	0.0	0.0	chr6	10585697	10585724	(160220255)	+	(GGCTG)n	Simple_repeat	1	28	(0)	3329792
13	19.4	4.9	0.0	chr6	14211240	14211280	(156594699)	+	(GCCTC)n	Simple_repeat	1	43	(0)	3335634
847	26.2	8.9	4.8	chr6	14397491	14397843	(156408136)	C	LTR88b	LTR/Gypsy?	(468)	369	1	3335925
19	21.4	6.9	1.3	chr6	15248822	15248893	(155557086)	+	(GGC)n	Simple_repeat	1	77	(0)	3337662
2116	10.9	0.0	0.0	chr6	15271718	15271992	(155533987)	+	AluSz	SINE/Alu	1	275	(37)	3337701
1487	15.7	0.3	12.9	chr6	15271993	15272158	(155533821)	+	AluJo	SINE/Alu	155	312	(0)	3337700
1701	7.7	2.7	1.4	chr6	17200187	17200445	(153605534)	C	AluSx1	SINE/Alu	(0)	312	58	3340711
5881	12.9	11.6	14.7	chr6	17200446	17201745	(153604234)	+	LTR12D	LTR/ERV1	1	1254	(0)	3340712
18	12.8	0.0	0.0	chr6	18122654	18122687	(152683292)	+	(ACGGTC)n	Simple_repeat	1	34	(0)	3342482
248	28.3	5.0	0.0	chr6	18122833	18122963	(152683016)	C	MIRc	SINE/MIR	(78)	190	45	3342483
8590	8.0	17.7	0.4	chr6	21609123	21610425	(149195554)	C	LTR12C	LTR/ERV1	(0)	1579	2	3347942
16	8.3	0.0	0.0	chr6	24359731	24359756	(146446223)	+	(GGAA)n	Simple_repeat	1	26	(0)	3351760
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
855	30.7	2.4	0.4	chr6	24981651	24981892	(145824087)	+	MIR	SINE/MIR	12	258	(4)	3352878
15	20.5	0.0	2.4	chr6	25652156	25652196	(145153783)	+	G-rich	Low_complexity	1	41	(0)	3353909
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
1918	7.4	1.9	0.8	chr6	27871264	27871519	(142934460)	C	AluSc8	SINE/Alu	(16)	295	37	3357737
18	13.7	1.7	8.3	chr6	29632912	29632970	(141173009)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3360372
22	15.1	1.8	3.6	chr6	29633070	29633124	(141172855)	+	G-rich	Low_complexity	1	56	(0)	3360373
13	10.7	9.5	2.2	chr6	30647306	30647347	(140158632)	+	GA-rich	Low_complexity	1	46	(0)	3361953
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
212	35.8	9.6	0.8	chr6	34115718	34115841	(136690138)	+	MIR3	SINE/MIR	8	143	(65)	3367661
23	25.1	0.0	0.0	chr6	34132556	34132614	(136673365)	+	(TCTG)n	Simple_repeat	1	59	(0)	3367692
213	23.4	0.0	2.1	chr6	35318035	35318082	(135487897)	+	MIRc	SINE/MIR	122	168	(100)	3370117
13	11.2	4.5	6.5	chr6	35486673	35486716	(135319263)	+	(GCTCTGG)n	Simple_repeat	1	46	(0)	3370474
15	26.1	0.0	1.9	chr6	35805334	35805385	(135000594)	+	(GGAGCCG)n	Simple_repeat	1	52	(0)	3371201
9984	7.3	9.6	0.4	chr6	35931086	35932485	(134873494)	+	LTR12C	LTR/ERV1	3	1538	(41)	3371472
17	27.3	1.6	1.6	chr6	36986054	36986116	(133819863)	+	(AGCTCC)n	Simple_repeat	1	64	(0)	3373669
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
14	25.3	2.0	2.0	chr6	37649091	37649139	(133156840)	+	(CGG)n	Simple_repeat	1	50	(0)	3375062
320	28.4	6.9	3.9	chr6	37784242	37784395	(133021584)	C	MIRb	SINE/MIR	(17)	251	93	3375352
374	21.2	9.0	2.2	chr6	37784489	37784623	(133021356)	C	LTR33	LTR/ERVL	(0)	515	371	3375353
974	22.4	2.0	4.6	chr6	37784647	37784908	(133021071)	C	LTR33	LTR/ERVL	(214)	301	47	3375353
12	9.9	2.6	7.7	chr6	39314321	39314358	(131491621)	+	G-rich	Low_complexity	1	39	(0)	3377873
419	27.4	11.1	6.2	chr6	40329014	40329336	(130476643)	C	L2c	LINE/L2	(25)	3362	3022	3379289
16	21.8	4.3	4.2	chr6	41406921	41406989	(129398990)	+	(GGCGC)n	Simple_repeat	1	72	(0)	3381087
351	24.3	5.3	0.0	chr6	42136878	42136984	(128668995)	+	MER5A1	DNA/hAT-Charlie	46	158	(8)	3382616
14	17.7	0.0	0.0	chr6	43243536	43243567	(127562412)	+	G-rich	Low_complexity	1	32	(0)	3384993
27	22.8	4.9	0.0	chr6	43243614	43243695	(127562284)	+	(GCC)n	Simple_repeat	1	86	(0)	3384994
12	10.0	0.0	0.0	chr6	43427151	43427172	(127378807)	+	(TCCA)n	Simple_repeat	1	22	(0)	3385339
453	21.6	3.0	1.0	chr6	43427174	43427270	(127378709)	C	FLAM_A	SINE/Alu	(27)	115	17	3385340
30	0.0	0.0	0.0	chr6	44002767	44002794	(126803185)	+	(GCG)n	Simple_repeat	1	28	(0)	3386395
21	15.8	1.9	3.7	chr6	44217484	44217536	(126588443)	+	(CTG)n	Simple_repeat	1	54	(0)	3386805
17	11.7	2.6	2.5	chr6	44297771	44297810	(126508169)	+	(CGCTGC)n	Simple_repeat	1	40	(0)	3386924
476	27.3	6.4	3.0	chr6	44387161	44387326	(126418653)	C	MIRb	SINE/MIR	(0)	268	97	3387104
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
20	25.2	0.0	7.6	chr6	53795054	53795075	(117010904)	+	(GCG)n	Simple_repeat	53	103	(0)	3400740
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
39	4.7	0.0	0.0	chr6	73263040	73263084	(97542895)	+	(GGC)n	Simple_repeat	1	45	(0)	3423001
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
350	24.2	0.1	0.0	chr6	85679445	85679519	(85126460)	C	MIRc	SINE/MIR	(53)	155	81	3439431
2213	7.7	1.0	1.7	chr6	89820075	89820374	(80985605)	+	AluSz	SINE/Alu	1	298	(14)	3445427
23	21.4	3.8	2.2	chr6	90297035	90297105	(80508874)	+	G-rich	Low_complexity	1	72	(0)	3446172
1501	27.7	14.4	2.5	chr6	93721413	93722104	(77083875)	+	LTR50	LTR/ERVL	7	795	(0)	3450427
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
30	0.0	0.0	0.0	chr6	100892648	100892676	(69913303)	+	(CCTCC)n	Simple_repeat	1	29	(0)	3459613
15	0.0	4.0	0.0	chr6	100892677	100892692	(69913287)	+	(TCTTT)n	Simple_repeat	5	20	(0)	3459614
1739	16.6	3.8	7.5	chr6	100892941	100893356	(69912623)	+	MER61-int	LTR/ERV1	356	755	(4462)	3459612
25681	6.6	0.6	0.1	chr6	100908126	100914267	(69891712)	C	L1PA4	LINE/L1	(1)	6327	178	3459638
282	36.6	8.1	3.0	chr6	101614697	101614896	(69191083)	+	MamRTE1	LINE/RTE-BovB	3054	3264	(548)	3460538
6936	20.9	10.7	1.8	chr6	103183597	103185188	(67620791)	+	MER52A	LTR/ERV1	2	1753	(2)	3462428
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
196	36.2	0.9	0.0	chr6	106804746	106804850	(64001129)	C	MIRb	SINE/MIR	(35)	233	128	3467547
14	19.9	3.5	5.1	chr6	106975331	106975391	(63830588)	+	G-rich	Low_complexity	1	60	(0)	3467862
1532	12.7	0.0	0.0	chr6	107124812	107125023	(63680956)	+	AluJb	SINE/Alu	86	297	(15)	3468242
457	33.3	11.1	0.0	chr6	107125146	107125370	(63680609)	+	MIRb	SINE/MIR	16	268	(0)	3468243
196	25.8	11.4	0.0	chr6	107459778	107459839	(63346140)	+	L2b	LINE/L2	3279	3348	(27)	3468895
15	18.9	7.8	2.9	chr6	109382076	109382139	(61423840)	+	(CCGC)n	Simple_repeat	1	69	(0)	3472067
12	9.1	4.2	0.0	chr6	111552635	111552658	(59253321)	+	(CTCC)n	Simple_repeat	1	25	(0)	3475817
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
32	26.9	0.0	3.7	chr6	116616035	116616141	(54189838)	+	(TCCC)n	Simple_repeat	1	107	(0)	3482821
17	8.2	3.9	0.0	chr6	116616124	116616149	(54189830)	+	(CA)n	Simple_repeat	1	27	(0)	3482822
216	31.4	0.0	8.2	chr6	116680803	116680875	(54125104)	+	L2a	LINE/L2	3322	3388	(38)	3482933
14	22.6	2.4	0.0	chr6	116680890	116680930	(54125049)	+	(GAAT)n	Simple_repeat	1	42	(0)	3482934
37	0.0	0.0	0.0	chr6	116681112	116681145	(54124834)	+	(CCG)n	Simple_repeat	1	34	(0)	3482935
258	26.2	20.4	6.5	chr6	116765801	116765984	(54039995)	C	L3	LINE/CR1	(104)	3995	3780	3483066
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
13	13.2	6.7	4.2	chr6	125956943	125956987	(44848992)	+	(GAGGCGC)n	Simple_repeat	1	48	(0)	3495078
581	23.1	13.6	4.2	chr6	127483490	127483701	(43322278)	C	MER102b	DNA/hAT-Charlie	(59)	282	48	3496949
908	15.8	0.5	4.0	chr6	131295159	131295356	(39510623)	+	MER61A	LTR/ERV1	1	191	(150)	3502132
3543	6.7	0.2	0.7	chr6	131295357	131295806	(39510173)	+	LTR7	LTR/ERV1	1	448	(2)	3502133
11	21.2	6.8	0.0	chr6	134175662	134175705	(36630274)	+	G-rich	Low_complexity	1	47	(0)	3506325
16	20.2	5.8	4.1	chr6	134175874	134175942	(36630037)	+	GA-rich	Low_complexity	1	73	(0)	3506326
12	20.7	0.0	2.9	chr6	134175910	134175944	(36630035)	+	G-rich	Low_complexity	1	35	(0)	3506327
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
830	14.2	0.0	0.0	chr6	138198963	138199075	(32606904)	+	AluJb	SINE/Alu	6	118	(194)	3512612
310	29.1	12.2	2.0	chr6	138199100	138199247	(32606732)	+	MIR	SINE/MIR	41	212	(56)	3512613
26	21.3	0.0	2.9	chr6	138692906	138692974	(32113005)	+	G-rich	Low_complexity	1	69	(0)	3513358
15	4.7	0.0	0.0	chr6	138693080	138693101	(32112878)	+	(GGC)n	Simple_repeat	1	22	(0)	3513359
12	19.4	0.0	5.1	chr6	138693300	138693338	(32112641)	+	(CCGCGC)n	Simple_repeat	1	39	(0)	3513360
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
27554	2.3	0.2	0.0	chr6	141916864	141922880	(28883099)	+	L1PA2	LINE/L1	130	6155	(0)	3517873
17	7.0	0.0	5.9	chr6	142146996	142147029	(28658950)	+	(AACAA)n	Simple_repeat	1	34	(0)	3518107
12	9.3	0.0	4.0	chr6	142301821	142301845	(28504134)	+	(CGC)n	Simple_repeat	1	25	(0)	3518336
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
14	5.0	0.0	0.0	chr6	144285621	144285641	(26520338)	+	(TCTT)n	Simple_repeat	1	21	(0)	3521176
54	0.0	0.0	0.0	chr6	146028233	146028278	(24777701)	+	(GT)n	Simple_repeat	1	46	(0)	3523493
63	0.0	0.0	0.0	chr6	148748400	148748453	(22057526)	+	(TG)n	Simple_repeat	1	54	(0)	3527386
771	18.2	7.3	4.6	chr6	148972771	148972943	(21833036)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3527735
1655	23.5	3.0	0.7	chr6	149933919	149934347	(20871632)	C	MER119	DNA/hAT-Charlie	(38)	545	107	3529410
5526	15.8	2.2	1.1	chr6	151128532	151129379	(19676600)	+	THE1D-int	LTR/ERVL-MaLR	287	1144	(487)	3531367
707	18.2	12.3	0.0	chr6	151493541	151493683	(19312296)	C	MER45A	DNA/hAT-Tip100	(0)	178	16	3532103
89	25.2	4.3	3.3	chr6	153832600	153832892	(16973087)	+	(ACACAT)n	Simple_repeat	1	296	(0)	3535443
28	6.8	0.0	4.0	chr6	153832893	153832942	(16973037)	+	(CACACACATG)n	Simple_repeat	1	50	(0)	3535444
89	25.2	4.3	3.3	chr6	153832943	153833000	(16972979)	+	(ACACAT)n	Simple_repeat	3	60	(0)	3535445
845	27.2	14.5	3.0	chr6	155195450	155196320	(15609659)	C	L2a	LINE/L2	(9)	3417	2451	3537804
1114	22.6	14.1	4.2	chr6	157533148	157533677	(13272302)	C	L2a	LINE/L2	(1)	3425	2858	3541067
18	13.4	0.0	0.0	chr6	157552255	157552287	(13253692)	+	(TGAG)n	Simple_repeat	1	33	(0)	3541094
54	0.0	0.0	0.0	chr6	160347789	160347837	(10458142)	+	(GCCCT)n	Simple_repeat	1	49	(0)	3545346
11388	16.4	3.5	2.3	chr6	165049248	165051468	(5754511)	+	HUERS-P3b-int	LTR/ERV1	403	2652	(4766)	3551498
284	20.6	1.6	1.6	chr6	165819765	165819828	(4986151)	+	L2a	LINE/L2	3363	3426	(0)	3552425
188	32.4	6.3	2.6	chr6	166551840	166551915	(4254064)	+	MamRTE1	LINE/RTE-BovB	3623	3701	(111)	3553387
3291	19.4	6.2	5.1	chr6	166988471	166989237	(3816742)	C	LTR19C	LTR/ERV1	(0)	779	4	3553874
3875	16.0	3.7	3.3	chr6	167163415	167164138	(3641841)	+	LTR8A	LTR/ERV1	1	727	(0)	3554109
15194	12.4	3.9	1.1	chr6	167351639	167352743	(3453236)	+	Tigger1	DNA/TcMar-Tigger	1	1172	(1246)	3554314
16	21.6	3.5	3.4	chr6	168441372	168441428	(2364551)	+	(TGC)n	Simple_repeat	1	59	(0)	3555489
190	31.8	3.1	1.6	chr6	168541039	168541102	(2264877)	C	LFSINE_Vert	SINE/tRNA	(379)	80	16	3555573
1757	8.0	0.0	0.0	chr6	168784087	168784310	(2021669)	C	AluY	SINE/Alu	(1)	310	87	3555799
1307	30.6	13.4	5.2	chr6	168883498	168884610	(1921369)	+	Arthur1B	DNA/hAT-Tip100	3	1221	(4)	3555912
477	28.8	6.4	5.1	chr7	125527	125742	(159220231)	C	L1ME3A	LINE/L1	(0)	6173	5955	3557987
2627	5.2	0.0	0.3	chr7	125988	126295	(159219678)	C	AluY	SINE/Alu	(4)	307	1	3557988
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
17	13.3	0.0	11.3	chr7	975609	975670	(158370303)	+	(GCCCC)n	Simple_repeat	1	62	(0)	3559144
253	22.9	1.6	1.4	chr7	975744	975834	(158370139)	C	MIRc	SINE/MIR	(65)	165	77	3559145
2473	7.8	0.3	0.0	chr7	1053547	1053852	(158292121)	+	AluSx1	SINE/Alu	2	308	(4)	3559221
165	34.1	0.7	0.9	chr7	1070468	1071030	(158274943)	+	(CACACA)n	Simple_repeat	1	567	(0)	3559232
1129	30.0	4.4	1.8	chr7	2465847	2466287	(156879686)	C	L1MC3	LINE/L1	(1291)	6494	6042	3561475
321	20.0	2.6	0.0	chr7	2466360	2466434	(156879539)	C	L1MB8	LINE/L1	(6)	6172	6096	3561476
865	14.9	0.0	0.8	chr7	2466449	2466582	(156879391)	C	FLAM_C	SINE/Alu	(10)	133	1	3561477
30	0.0	3.1	0.0	chr7	3301144	3301175	(156044798)	+	(CGGCGGG)n	Simple_repeat	1	33	(0)	3563107
16	28.7	2.5	3.6	chr7	5592618	5592698	(153753275)	+	(GGC)n	Simple_repeat	1	83	(0)	3567435
13	13.5	4.3	6.2	chr7	5634545	5634590	(153711383)	+	(GGCAG)n	Simple_repeat	1	48	(0)	3567506
38	24.9	4.2	7.0	chr7	6272188	6272447	(153073526)	+	(CCCCGGC)n	Simple_repeat	1	271	(0)	3568920
255	33.3	0.8	4.1	chr7	6447537	6447658	(152898315)	+	MIR	SINE/MIR	109	226	(36)	3569390
179	0.0	3.4	0.0	chr7	6577112	6577287	(152768686)	+	(ATAAA)n	Simple_repeat	1	182	(0)	3569724
29	5.8	5.4	1.7	chr7	6615488	6615543	(152730430)	+	(GCG)n	Simple_repeat	1	59	(0)	3569813
13	13.1	0.0	0.0	chr7	7567205	7567229	(151778744)	+	(GCCG)n	Simple_repeat	1	25	(0)	3571261
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
3970	10.9	4.0	0.3	chr7	10908421	10909061	(148436912)	+	LTR9C	LTR/ERV1	1	666	(0)	3575489
49	0.0	0.0	0.0	chr7	14903213	14903254	(144442719)	+	(GT)n	Simple_repeat	1	42	(0)	3580580
22	12.6	2.2	2.2	chr7	20784401	20784445	(138561528)	+	(GCC)n	Simple_repeat	1	46	(0)	3588257
22	16.7	0.0	8.4	chr7	22193797	22193867	(137152106)	+	G-rich	Low_complexity	1	71	(0)	3590314
13	24.9	4.6	2.9	chr7	23474085	23474149	(135871824)	+	(GCCGC)n	Simple_repeat	1	68	(0)	3592403
1032	26.0	20.2	0.4	chr7	25759773	25760310	(133585663)	C	LTR16D	LTR/ERVL	(4)	647	1	3595886
188	30.4	3.5	0.0	chr7	26154361	26154416	(133191557)	+	MamRTE1	LINE/RTE-BovB	2971	3028	(784)	3596517
18611	5.2	1.2	0.1	chr7	27447206	27449676	(131896297)	C	L1P2	LINE/L1	(3656)	2490	8	3598516
2404	8.5	0.0	0.0	chr7	27924093	27924374	(131421599)	C	AluSg7	SINE/Alu	(26)	283	2	3599245
21	3.0	0.0	7.5	chr7	28409184	28409223	(130936750)	+	(GCGGG)n	Simple_repeat	1	40	(0)	3600024
12	29.4	0.0	2.1	chr7	29189667	29189714	(130156259)	+	(CTCTCC)n	Simple_repeat	1	48	(0)	3601202
13	7.1	6.2	2.9	chr7	30594954	30594985	(128750988)	+	(TGCTGC)n	Simple_repeat	1	34	(0)	3603361
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
13	25.9	2.2	0.0	chr7	30938442	30938487	(128407486)	+	(CCTGGT)n	Simple_repeat	1	47	(0)	3603904
13	20.5	2.6	0.0	chr7	30938796	30938834	(128407139)	+	(CCCCAAG)n	Simple_repeat	1	40	(0)	3603905
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
32	36.8	1.1	2.1	chr7	32495286	32495475	(126850498)	+	(GCCCC)n	Simple_repeat	1	192	(0)	3606331
28067	2.3	0.2	0.0	chr7	34169570	34175587	(125170386)	C	L1PA2	LINE/L1	(0)	6155	129	3608926
2169	24.5	10.0	4.1	chr7	34175586	34175882	(125170091)	C	L1MDa	LINE/L1	(5318)	1315	1001	3608925
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
18	15.8	8.6	1.6	chr7	36153193	36153250	(123192723)	+	(GCG)n	Simple_repeat	1	63	(0)	3611822
18	29.2	1.5	1.4	chr7	36153375	36153442	(123192531)	+	(CGC)n	Simple_repeat	1	69	(0)	3611823
232	15.2	4.8	3.3	chr7	37053120	37053180	(122292793)	C	L1ME4b	LINE/L1	(1)	891	830	3613194
3661	12.6	22.5	8.9	chr7	37491931	37492896	(121853077)	+	LTR12D	LTR/ERV1	1	1136	(118)	3613831
12	21.5	2.5	2.4	chr7	37916454	37916518	(121429455)	+	(GCGCC)n	Simple_repeat	1	65	(0)	3614409
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
208	33.0	4.9	0.0	chr7	38178407	38178503	(121167470)	C	MIRc	SINE/MIR	(82)	186	85	3614740
344	19.5	7.8	2.2	chr7	39259946	39261103	(120084870)	+	(AC)n	Simple_repeat	1	1248	(0)	3616275
25	11.9	1.6	6.3	chr7	42237942	42238003	(117107970)	+	(CGC)n	Simple_repeat	1	63	(0)	3620932
44	2.3	0.0	0.0	chr7	42238004	42238047	(117107926)	+	(CCT)n	Simple_repeat	1	44	(0)	3620933
21	21.0	1.6	3.1	chr7	42238048	42238057	(117107916)	+	(CCCCGC)n	Simple_repeat	6	15	(0)	3620934
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
236	30.8	17.0	8.8	chr7	44082076	44082246	(115263727)	C	MIRc	SINE/MIR	(70)	198	5	3623777
13	9.3	0.0	0.0	chr7	44082525	44082547	(115263426)	+	(GCGG)n	Simple_repeat	1	23	(0)	3623778
12	27.3	2.2	0.0	chr7	44582356	44582400	(114763573)	+	(CCGCCCC)n	Simple_repeat	1	46	(0)	3624448
452	21.8	12.4	0.0	chr7	45769309	45769494	(113576479)	+	FRAM	SINE/Alu	45	295	(7)	3626331
11842	11.7	1.2	1.6	chr7	46015232	46018455	(113327518)	+	L1PA8A	LINE/L1	120	3343	(3118)	3626708
5256	12.2	1.4	3.1	chr7	47621722	47622564	(111723409)	C	LTR1A2	LTR/ERV1	(8)	829	1	3628780
258	30.2	3.6	0.9	chr7	47979832	47979938	(111366035)	+	Charlie21a	DNA/hAT-Charlie	27	136	(1077)	3629309
6658	9.8	2.0	1.2	chr7	47989679	47990639	(111355334)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3629330
603	30.9	6.3	3.9	chr7	47992099	47992580	(111353393)	+	HAL1	LINE/L1	707	1200	(1307)	3629335
32	5.3	0.0	0.0	chr7	50450392	50450430	(108895543)	+	(CGTG)n	Simple_repeat	1	39	(0)	3632383
12	18.4	5.4	0.0	chr7	50450432	50450468	(108895505)	+	G-rich	Low_complexity	1	39	(0)	3632384
475	25.2	2.9	4.3	chr7	50803486	50803626	(108542347)	C	MLT1G	LTR/ERVL-MaLR	(10)	581	443	3632806
307	25.5	1.2	6.0	chr7	50803617	50803762	(108542211)	+	MLT1L	LTR/ERVL-MaLR	164	303	(292)	3632807
293	38.5	0.7	0.0	chr7	51327443	51327585	(108018388)	C	MamGypLTR3a	LTR/Gypsy	(793)	188	45	3633498
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
12	14.7	11.1	0.0	chr7	65080968	65081012	(94264961)	+	(GCGCTG)n	Simple_repeat	1	50	(0)	3647225
462	15.1	0.0	0.0	chr7	66493312	66493384	(92852589)	C	AluJr	SINE/Alu	(195)	117	45	3650100
1107	14.5	0.0	0.0	chr7	66592458	66592623	(92753350)	+	AluSx	SINE/Alu	146	311	(1)	3650350
126	16.6	4.2	0.4	chr7	72622601	72622863	(86723110)	+	(AC)n	Simple_repeat	1	274	(0)	3662733
13	21.1	0.0	6.1	chr7	72925188	72925236	(86420737)	+	(GGCCGG)n	Simple_repeat	1	49	(0)	3663374
306	24.6	19.8	0.8	chr7	73308961	73309091	(86036882)	C	L1M5	LINE/L1	(601)	5523	5362	3664325
15	0.0	0.0	0.0	chr7	73309092	73309108	(86036865)	+	(AT)n	Simple_repeat	1	17	(0)	3664326
2030	9.9	4.2	0.0	chr7	73309110	73309382	(86036591)	C	AluSx	SINE/Alu	(21)	291	7	3664327
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
22	11.8	0.0	0.0	chr7	73770144	73770180	(85575793)	+	(GACG)n	Simple_repeat	1	37	(0)	3665431
14	25.5	8.1	0.0	chr7	73770213	73770286	(85575687)	+	(GCTGCG)n	Simple_repeat	1	80	(0)	3665432
355	13.8	0.0	0.8	chr7	74606890	74606954	(84739019)	+	7SLRNA	srpRNA	227	307	(13)	3667525
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
16	19.6	0.0	0.0	chr7	80764564	80764593	(78581380)	+	(T)n	Simple_repeat	1	30	(0)	3678594
1820	16.4	0.0	0.7	chr7	83467058	83467331	(75878642)	C	AluJb	SINE/Alu	(5)	307	36	3682299
48	0.0	0.0	0.0	chr7	87628585	87628625	(71717348)	+	(GT)n	Simple_repeat	1	41	(0)	3687477
18	0.0	0.0	0.0	chr7	87934661	87934680	(71411293)	+	(T)n	Simple_repeat	1	20	(0)	3687846
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
535	23.3	9.3	6.8	chr7	95867286	95867514	(63478459)	C	MIRb	SINE/MIR	(22)	246	1	3698581
12	23.8	2.2	2.1	chr7	98281281	98281326	(61064647)	+	(CCCGCC)n	Simple_repeat	1	47	(0)	3702253
12	22.4	0.0	2.6	chr7	98617086	98617123	(60728850)	+	(CTCACG)n	Simple_repeat	1	38	(0)	3702996
1253	13.9	2.5	0.5	chr7	99500501	99500694	(59845279)	C	AluSx3	SINE/Alu	(31)	280	83	3704872
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
1456	15.2	13.4	1.5	chr7	100706466	100706735	(58639238)	C	AluJo	SINE/Alu	(5)	307	1	3707180
14	11.6	0.0	3.3	chr7	100836858	100836887	(58509086)	+	(TGGGG)n	Simple_repeat	1	30	(0)	3707489
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
12	20.2	0.0	6.7	chr7	101154370	101154414	(58191559)	+	G-rich	Low_complexity	1	45	(0)	3708121
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
15	21.5	2.2	2.2	chr7	101180498	101180542	(58165431)	+	(TGG)n	Simple_repeat	1	46	(0)	3708167
14	24.7	1.8	3.5	chr7	101202084	101202139	(58143834)	+	G-rich	Low_complexity	1	57	(0)	3708233
1823	15.7	0.7	3.5	chr7	101202639	101202950	(58143023)	C	AluJb	SINE/Alu	(9)	303	1	3708234
1855	25.1	16.9	2.6	chr7	101299647	101301210	(58044763)	+	L1M2	LINE/L1	95	2372	(4837)	3708458
2349	8.0	0.0	0.0	chr7	101302358	101302656	(58043317)	C	AluSq2	SINE/Alu	(14)	299	1	3708462
626	28.1	10.3	2.6	chr7	101302809	101303192	(58042781)	+	L1M2	LINE/L1	11	427	(6422)	3708463
1826	13.6	0.0	0.0	chr7	101362047	101362304	(57983669)	C	AluSx1	SINE/Alu	(16)	296	39	3708614
188	25.7	20.4	2.7	chr7	101362507	101362618	(57983355)	+	MIRb	SINE/MIR	110	246	(22)	3708615
587	23.4	10.8	2.3	chr7	101936000	101936283	(57409690)	C	L2a	LINE/L2	(6)	3420	3049	3709964
287	28.0	4.8	4.8	chr7	101936930	101937053	(57408920)	C	MER5A	DNA/hAT-Charlie	(43)	146	23	3709965
13	6.9	2.8	8.1	chr7	102287244	102287279	(57058694)	+	G-rich	Low_complexity	1	37	(0)	3710658
535	30.0	2.0	1.6	chr7	104772195	104772396	(54573577)	C	MIR3	SINE/MIR	(47)	221	11	3714584
362	32.7	0.0	0.0	chr7	110718865	110718965	(48627008)	C	Charlie17a	DNA/hAT-Charlie	(24)	193	93	3723382
22575	11.9	1.1	2.5	chr7	112641134	112647421	(46698552)	C	L1PA8A	LINE/L1	(9)	6307	126	3726128
6260	11.9	1.4	1.0	chr7	119100247	119101210	(40244763)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3734768
29	16.1	0.0	0.0	chr7	121873273	121873328	(37472645)	+	(CTCTCT)n	Simple_repeat	1	56	(0)	3738330
30	3.4	0.0	0.0	chr7	121873329	121873358	(37472615)	+	(CA)n	Simple_repeat	1	30	(0)	3738331
3524	5.8	0.0	0.2	chr7	125915291	125915739	(33430234)	+	LTR7	LTR/ERV1	1	448	(2)	3743774
625	18.1	0.0	0.0	chr7	125915742	125915835	(33430138)	+	AluJr4	SINE/Alu	147	240	(72)	3743775
14	21.2	7.2	4.5	chr7	128352153	128352235	(30993738)	+	(GCCAG)n	Simple_repeat	1	89	(0)	3747054
353	23.5	2.2	3.3	chr7	129782953	129783081	(29562892)	+	MIRc	SINE/MIR	40	160	(102)	3749822
1951	14.4	0.0	0.3	chr7	131542374	131542658	(27803315)	+	AluJo	SINE/Alu	1	284	(28)	3752985
2232	10.5	0.7	0.7	chr7	131547093	131547398	(27798575)	+	AluSp	SINE/Alu	2	307	(6)	3752993
213	29.5	1.1	6.4	chr7	131557169	131557262	(27788711)	+	MIR1_Amn	SINE/MIR	71	159	(71)	3753012
529	23.5	10.2	0.0	chr7	131557308	131557439	(27788534)	C	MIR	SINE/MIR	(54)	208	62	3753013
269	15.7	8.8	2.2	chr7	131653945	131654761	(27691212)	+	(TG)n	Simple_repeat	1	889	(0)	3753223
41	17.7	2.8	3.6	chr7	132577367	132577498	(26768475)	+	(CCTC)n	Simple_repeat	1	130	(0)	3754597
15	16.3	4.7	2.2	chr7	134779647	134779689	(24566284)	+	(CTGC)n	Simple_repeat	1	45	(0)	3758022
12	11.5	3.3	3.2	chr7	135336300	135336329	(24009644)	+	(CCTT)n	Simple_repeat	1	31	(0)	3758771
1550	30.6	10.5	3.7	chr7	135336342	135337441	(24008532)	C	L2a	LINE/L2	(0)	3426	2253	3758772
12	17.9	6.2	5.9	chr7	141239142	141239205	(18106768)	+	(TGTGCA)n	Simple_repeat	1	68	(0)	3768989
782	23.7	14.2	10.3	chr7	141239232	141239650	(18106323)	C	LTR16	LTR/ERVL	(0)	438	1	3768990
2060	3.2	0.0	0.8	chr7	144255822	144256073	(15089900)	+	L1PA2	LINE/L1	5906	6155	(0)	3772957
2148	11.9	0.7	0.3	chr7	144353053	144353355	(14992618)	C	AluSx1	SINE/Alu	(8)	304	1	3773102
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
613	4.2	0.0	0.0	chr7	149415138	149415209	(9930764)	C	tRNA-Cys-TGY	tRNA	(3)	72	1	3780660
418	28.2	9.7	1.3	chr7	151175053	151175203	(8170770)	C	MIR3	SINE/MIR	(27)	181	17	3783003
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
17	0.0	0.0	0.0	chr7	158469736	158469754	(876219)	+	(A)n	Simple_repeat	1	19	(0)	3793278
1113	14.3	2.3	4.5	chr8	1802143	1802362	(143336274)	+	MER4D0	LTR/ERV1	3	217	(655)	3796118
12	17.4	8.9	0.0	chr8	6708877	6708921	(138429715)	+	(CCGGCGTC)n	Simple_repeat	1	49	(0)	3802489
12	18.1	0.0	3.0	chr8	6835514	6835546	(138303090)	+	(CCTGCC)n	Simple_repeat	1	33	(0)	3802658
18	18.9	4.2	0.0	chr8	9933877	9933924	(135204712)	+	(GCCTC)n	Simple_repeat	1	50	(0)	3807297
208	37.1	5.3	3.3	chr8	9933976	9934159	(135204477)	+	MIRc	SINE/MIR	19	206	(62)	3807298
22	10.4	0.0	0.0	chr8	9950196	9950227	(135188409)	+	(GT)n	Simple_repeat	1	32	(0)	3807331
185	31.0	11.5	1.0	chr8	10929035	10929135	(134209501)	+	MIR3	SINE/MIR	91	203	(5)	3808790
13	22.5	2.0	3.9	chr8	11201987	11202036	(133936600)	+	(TCTTTT)n	Simple_repeat	1	51	(0)	3809245
11	27.8	0.0	3.9	chr8	11468003	11468053	(133670583)	+	(CCTGCC)n	Simple_repeat	1	51	(0)	3809628
377	27.1	21.3	3.9	chr8	11631136	11631419	(133507217)	+	L3	LINE/CR1	3742	4088	(11)	3809904
2223	8.6	1.0	0.3	chr8	11801696	11801986	(133336650)	C	AluSc	SINE/Alu	(14)	295	3	3810178
13	14.4	2.3	6.7	chr8	20197135	20197178	(124941458)	+	(CTTCC)n	Simple_repeat	1	45	(0)	3822435
14	15.3	0.0	0.0	chr8	20303624	20303652	(124834984)	+	(GACG)n	Simple_repeat	1	29	(0)	3822603
333	24.7	2.2	3.3	chr8	20455575	20455666	(124682970)	C	MIRb	SINE/MIR	(90)	178	88	3822888
461	33.2	7.0	5.5	chr8	20458158	20458450	(124680186)	+	L2c	LINE/L2	3087	3384	(3)	3822893
261	42.1	1.3	2.2	chr8	22188618	22188843	(122949793)	C	L3	LINE/CR1	(3415)	684	461	3825724
273	31.1	7.4	7.3	chr8	22189036	22189433	(122949203)	C	L1ME4b	LINE/L1	(68)	824	492	3825725
13	19.1	0.0	0.0	chr8	23854663	23854692	(121283944)	+	(TGC)n	Simple_repeat	1	30	(0)	3828627
42	10.2	0.0	0.0	chr8	23854706	23854770	(121283866)	+	(GCT)n	Simple_repeat	1	65	(0)	3828628
256	25.2	5.1	4.3	chr8	23979084	23979199	(121159437)	+	Tigger15a	DNA/TcMar-Tigger	541	657	(58)	3828821
289	31.4	5.0	7.4	chr8	23979344	23979546	(121159090)	+	AmnSINE1	SINE/5S-Deu-L2	378	575	(0)	3828822
2676	4.6	0.0	0.0	chr8	24942855	24943159	(120195477)	C	AluY	SINE/Alu	(5)	306	2	3830212
12	26.3	0.0	5.5	chr8	24956547	24956601	(120182035)	+	GA-rich	Low_complexity	1	55	(0)	3830234
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
17	10.7	0.0	0.0	chr8	28401816	28401845	(116736791)	+	(CCCT)n	Simple_repeat	1	30	(0)	3836060
66	17.8	6.0	4.8	chr8	28402203	28402437	(116736199)	+	GA-rich	Low_complexity	1	249	(0)	3836061
24	15.8	6.7	2.5	chr8	30384444	30384518	(114754118)	+	G-rich	Low_complexity	1	80	(0)	3839683
31	3.1	0.0	0.0	chr8	30384617	30384649	(114753987)	+	(CTC)n	Simple_repeat	1	33	(0)	3839684
27	0.0	3.5	0.0	chr8	30384746	30384774	(114753862)	+	(CTTC)n	Simple_repeat	1	30	(0)	3839685
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
38	0.0	0.0	0.0	chr8	38442363	38442395	(106696241)	+	(GT)n	Simple_repeat	1	33	(0)	3852287
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
335	28.6	5.3	3.1	chr8	38468957	38469086	(106669550)	+	MIRb	SINE/MIR	88	220	(48)	3852338
21	16.2	0.0	4.4	chr8	38996919	38996963	(106141673)	+	(CG)n	Simple_repeat	1	45	(0)	3853349
22740	11.6	1.2	0.4	chr8	39796058	39802438	(105336198)	C	L1PA8A	LINE/L1	(0)	6446	2	3854352
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
11	29.7	1.8	1.8	chr8	47960107	47960161	(97178475)	+	(CCCGCT)n	Simple_repeat	1	56	(0)	3862668
2434	7.0	0.3	0.0	chr8	48007924	48008221	(97130415)	C	AluSx	SINE/Alu	(13)	299	1	3862761
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
16557	10.9	5.2	0.7	chr8	48251666	48254527	(96884109)	C	L1PBa	LINE/L1	(3542)	3320	327	3863131
451	18.9	8.6	3.8	chr8	48261210	48261341	(96877295)	C	L2a	LINE/L2	(0)	3426	3288	3863145
25	12.2	0.0	0.0	chr8	49911552	49911588	(95227048)	+	(A)n	Simple_repeat	1	37	(0)	3865001
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
18	0.0	4.3	0.0	chr8	52941548	52941570	(92197066)	+	(TG)n	Simple_repeat	1	24	(0)	3868911
28	0.0	0.0	0.0	chr8	54022277	54022302	(91116334)	+	(GCG)n	Simple_repeat	1	26	(0)	3870336
2519	12.1	0.0	0.0	chr8	54030608	54030920	(91107716)	C	AluSq2	SINE/Alu	(0)	313	1	3870357
315	19.7	2.5	3.3	chr8	54031139	54031233	(91107403)	C	7SLRNA	srpRNA	(18)	302	240	3870358
815	18.2	14.5	4.7	chr8	54031270	54031461	(91107175)	C	AluJb	SINE/Alu	(38)	274	61	3870359
1315	19.9	3.2	2.6	chr8	54031462	54031680	(91106956)	C	L1MB5	LINE/L1	(5595)	2025	1804	3870344
13	24.4	2.2	2.1	chr8	55103145	55103190	(90035446)	+	(CAG)n	Simple_repeat	1	47	(0)	3871977
363	25.2	3.0	1.9	chr8	55930860	55930966	(89207670)	C	AluJb	SINE/Alu	(217)	85	2	3873220
304	21.1	10.6	1.3	chr8	56157513	56157589	(88981047)	+	Tigger9a	DNA/TcMar-Tigger	648	732	(0)	3873622
198	27.9	16.8	2.5	chr8	61259922	61260083	(83878553)	+	L2b	LINE/L2	2951	3140	(235)	3880398
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
34	0.0	0.0	0.0	chr8	65841964	65841994	(79296642)	+	(GCC)n	Simple_repeat	1	31	(0)	3886499
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
11	23.8	10.1	0.0	chr8	65842755	65842823	(79295813)	+	(AGAATG)n	Simple_repeat	1	76	(0)	3886501
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
6332	12.7	1.7	0.4	chr8	67761043	67761985	(77376651)	+	L1P3	LINE/L1	229	1183	(5278)	3889761
11	14.8	4.9	4.7	chr8	67952330	67952370	(77186266)	+	(GCAGCGG)n	Simple_repeat	1	43	(0)	3890060
290	29.4	16.2	7.6	chr8	67955410	67955748	(77182888)	+	L2c	LINE/L2	2994	3387	(0)	3890064
1969	19.7	6.5	5.2	chr8	69488631	69489150	(75649486)	C	LTR53B	LTR/ERVL	(2)	531	5	3892101
26	0.0	0.0	0.0	chr8	69832995	69833019	(75305617)	+	(CCG)n	Simple_repeat	1	25	(0)	3892657
13	18.9	2.6	2.5	chr8	70033106	70033144	(75105492)	+	GA-rich	Low_complexity	1	40	(0)	3893145
16	28.6	1.4	2.8	chr8	70402238	70402308	(74736328)	+	(GGTGGA)n	Simple_repeat	1	72	(0)	3893734
38	24.8	3.0	4.7	chr8	73746880	73747045	(71391591)	+	(CCCCGC)n	Simple_repeat	1	171	(0)	3898434
1290	12.3	0.0	0.0	chr8	74048264	74048433	(71090203)	C	AluSq2	SINE/Alu	(15)	298	129	3899067
486	34.8	1.9	0.8	chr8	74048488	74048676	(71089960)	C	MLT1J	LTR/ERVL-MaLR	(147)	301	106	3899068
628	15.5	0.0	1.0	chr8	74048677	74048780	(71089856)	+	U6	snRNA	1	103	(4)	3899069
59	18.8	2.2	1.5	chr8	74048781	74048914	(71089722)	+	A-rich	Low_complexity	1	137	(0)	3899070
24714	7.1	0.9	0.1	chr8	78444886	78450991	(66687645)	+	L1PA5	LINE/L1	4	6141	(13)	3904707
261	28.9	21.8	4.0	chr8	80030539	80030837	(65107799)	+	L2a	LINE/L2	3051	3417	(9)	3906895
286	26.2	2.3	0.0	chr8	81618806	81618889	(63519747)	+	Kanga1c	DNA/TcMar-Tc2	6	91	(638)	3909518
589	25.0	4.8	1.2	chr8	81618934	81619095	(63519541)	+	Tigger13a	DNA/TcMar-Tigger	408	575	(196)	3909519
2415	9.3	0.3	0.3	chr8	81721523	81721834	(63416802)	+	AluSp	SINE/Alu	2	313	(0)	3909683
3623	13.3	6.0	0.0	chr8	88591899	88592524	(56546112)	C	LTR9C	LTR/ERV1	(0)	666	1	3918817
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
17	21.9	5.0	1.6	chr8	92095270	92095329	(53043307)	+	(CCTC)n	Simple_repeat	1	63	(0)	3923408
12	14.1	3.0	2.9	chr8	92095469	92095501	(53043135)	+	(GTGA)n	Simple_repeat	1	34	(0)	3923409
15	31.6	0.0	1.6	chr8	95133656	95133719	(50004917)	+	G-rich	Low_complexity	1	64	(0)	3928263
18	29.8	1.8	0.0	chr8	95133723	95133779	(50004857)	+	(GC)n	Simple_repeat	1	58	(0)	3928264
282	33.0	1.8	5.9	chr8	96235753	96235871	(48902765)	+	MIRb	SINE/MIR	13	126	(142)	3929960
17	24.9	0.6	9.1	chr8	96493395	96493499	(48645137)	+	A-rich	Low_complexity	1	96	(0)	3930397
22	26.5	3.2	3.1	chr8	96493672	96493766	(48644870)	+	GA-rich	Low_complexity	1	98	(0)	3930399
14	19.1	0.0	6.4	chr8	97644083	97644129	(47494507)	+	(GCCCC)n	Simple_repeat	1	47	(0)	3932076
15	24.2	3.6	1.8	chr8	97775888	97775942	(47362694)	+	(GGC)n	Simple_repeat	1	57	(0)	3932412
333	28.0	7.4	0.0	chr8	97893123	97893197	(47245439)	C	LTR101_Mam	LTR/ERVL	(21)	808	728	3932669
905	32.2	5.4	4.2	chr8	97893302	97893561	(47245075)	C	LTR101_Mam	LTR/ERVL	(346)	483	219	3932669
39	0.0	0.0	0.0	chr8	97893562	97893597	(47245039)	+	(TTAT)n	Simple_repeat	1	36	(0)	3932670
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
648	25.6	7.5	2.8	chr8	100667499	100667815	(44470821)	C	Charlie20a	DNA/hAT-Charlie	(257)	550	218	3937217
16	8.7	0.0	0.0	chr8	100951980	100952004	(44186632)	+	(GGC)n	Simple_repeat	1	25	(0)	3937835
14	18.0	2.5	2.4	chr8	100952688	100952727	(44185909)	+	(GCGCGG)n	Simple_repeat	1	41	(0)	3937836
13	21.2	2.1	4.2	chr8	102655686	102655732	(42482904)	+	(CGC)n	Simple_repeat	1	48	(0)	3940827
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
21	22.1	0.0	1.8	chr8	102655972	102656027	(42482609)	+	(CGCCCCC)n	Simple_repeat	1	56	(0)	3940829
212	26.3	3.4	1.7	chr8	102657811	102657868	(42480768)	+	L2	LINE/L2	2421	2479	(940)	3940831
268	33.5	9.7	8.9	chr8	102657889	102658360	(42480276)	+	L2	LINE/L2	2566	3041	(378)	3940831
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
12	16.8	8.8	3.2	chr8	103299019	103299075	(41839561)	+	G-rich	Low_complexity	1	62	(0)	3942080
1803	20.9	8.5	0.5	chr8	103624099	103624530	(41514106)	+	MLT2B1	LTR/ERVL	1	470	(50)	3942575
377	26.5	6.5	15.2	chr8	104342366	104342654	(40795982)	+	MER102c	DNA/hAT-Charlie	56	317	(14)	3943545
14	9.7	5.7	2.7	chr8	104466965	104466999	(40671637)	+	G-rich	Low_complexity	1	37	(0)	3943763
4786	12.0	3.7	0.6	chr8	106371764	106372473	(38766163)	C	L1PA8A	LINE/L1	(5140)	735	3	3946425
16	15.2	0.0	5.0	chr8	109644662	109644701	(35493935)	+	(CGC)n	Simple_repeat	1	40	(0)	3951138
14	9.6	0.0	0.0	chr8	109644792	109644814	(35493822)	+	(CGC)n	Simple_repeat	1	23	(0)	3951139
5106	12.2	1.3	1.0	chr8	110059854	110060633	(35078003)	+	LTR1	LTR/ERV1	1	782	(1)	3951673
17383	19.3	2.1	1.1	chr8	111147590	111153176	(33985460)	C	L1PA16	LINE/L1	(715)	6070	501	3953133
1357	21.3	4.0	4.4	chr8	112882137	112882707	(32255929)	+	MER4CL34	LTR/ERV1	1	872	(0)	3955404
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
30	16.8	3.9	2.5	chr8	118111659	118111735	(27026901)	+	(GCG)n	Simple_repeat	1	80	(0)	3962716
37	19.9	2.3	6.1	chr8	119208358	119208486	(25930150)	+	(GCG)n	Simple_repeat	1	132	(0)	3964522
235	22.1	11.3	4.4	chr8	119874443	119874532	(25264104)	+	MIRb	SINE/MIR	101	197	(71)	3965548
11	24.2	5.5	1.7	chr8	120125125	120125179	(25013457)	+	(CAGCGG)n	Simple_repeat	1	58	(0)	3966127
31	8.0	0.0	0.0	chr8	121641909	121641948	(23496688)	+	(GT)n	Simple_repeat	1	40	(0)	3968610
16	17.7	0.0	2.5	chr8	123768660	123768699	(21369937)	+	(GGCCGC)n	Simple_repeat	1	40	(0)	3972547
15	19.6	0.0	0.0	chr8	124998387	124998421	(20140215)	+	(GGCAGG)n	Simple_repeat	1	35	(0)	3974745
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
312	22.3	6.8	2.6	chr8	130016850	130016982	(15121654)	C	MIR3	SINE/MIR	(95)	173	29	3984187
486	21.9	16.8	2.1	chr8	130017098	130017284	(15121352)	C	L2a	LINE/L2	(0)	3426	3207	3984188
2851	12.3	6.4	2.2	chr8	131028987	131029435	(14109201)	+	MER1A	DNA/hAT-Charlie	59	527	(2)	3986205
19	14.9	0.0	0.0	chr8	131039963	131039999	(14098637)	+	(CCGCTG)n	Simple_repeat	1	37	(0)	3986221
377	25.5	3.2	6.1	chr8	132058209	132058371	(13080265)	+	MER91A	DNA/hAT-Tip100	36	193	(3)	3987836
291	35.0	1.8	4.8	chr8	132058506	132058736	(13079900)	+	MIRb	SINE/MIR	28	251	(17)	3987837
46	2.3	0.0	0.0	chr8	133296689	133296732	(11841904)	+	(AC)n	Simple_repeat	1	44	(0)	3990149
14	18.4	4.4	2.1	chr8	133297284	133297328	(11841308)	+	(GCGCCCC)n	Simple_repeat	1	47	(0)	3990150
12	19.4	4.7	2.2	chr8	133297384	133297426	(11841210)	+	G-rich	Low_complexity	1	45	(0)	3990151
17	17.6	4.4	0.0	chr8	133297583	133297627	(11841009)	+	(GTGTGC)n	Simple_repeat	1	47	(0)	3990152
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
213	23.5	0.0	3.8	chr8	140458276	140458328	(4680308)	+	L2b	LINE/L2	3099	3149	(226)	4001985
583	28.1	8.0	0.0	chr8	141056440	141056692	(4081944)	C	MLT2F	LTR/ERVL	(108)	555	281	4003092
293	25.9	4.5	0.0	chr8	141350938	141351022	(3787614)	C	MIR3	SINE/MIR	(32)	176	88	4003522
11	15.5	0.0	9.3	chr8	141351818	141351860	(3786776)	+	(GGCTGG)n	Simple_repeat	1	43	(0)	4003523
12	30.3	1.7	1.7	chr8	142545945	142546002	(2592634)	+	(CCCCTCA)n	Simple_repeat	1	59	(0)	4005030
530	28.4	8.9	3.9	chr8	142631863	142632096	(2506540)	C	MLT1F2	LTR/ERVL-MaLR	(20)	540	294	4005122
37	0.0	0.0	0.0	chr8	142632098	142632129	(2506507)	+	(AC)n	Simple_repeat	1	32	(0)	4005123
592	23.6	13.2	8.9	chr8	143245688	143245933	(1892703)	+	MLT1E1	LTR/ERVL-MaLR	366	623	(31)	4005972
28	25.7	7.9	2.9	chr8	143408004	143408193	(1730443)	+	(CCGGCC)n	Simple_repeat	1	205	(0)	4006177
181	32.4	7.9	0.9	chr8	143435457	143435562	(1703074)	C	L2a	LINE/L2	(14)	3412	3299	4006211
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
26	0.0	0.0	0.0	chr8	144327559	144327583	(811053)	+	(GAGGGC)n	Simple_repeat	1	25	(0)	4007453
314	32.0	10.5	0.2	chr8	144457247	144457439	(681197)	+	MIR	SINE/MIR	28	253	(15)	4007640
12	15.1	0.0	9.1	chr8	144527045	144527088	(611548)	+	(CGCCCG)n	Simple_repeat	1	44	(0)	4007707
11	22.4	1.9	5.7	chr9	214965	215016	(138179701)	+	(CGCCGCG)n	Simple_repeat	1	53	(0)	4008802
649	18.6	12.1	0.7	chr9	650414	650559	(137744158)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	4009521
2309	9.2	1.0	0.3	chr9	825950	826255	(137568462)	C	AluSz	SINE/Alu	(4)	308	1	4009818
455	13.5	5.5	8.8	chr9	826313	826426	(137568291)	C	MER53	DNA/hAT	(0)	193	84	4009819
1964	15.0	0.0	0.0	chr9	2923524	2923816	(135470901)	+	AluSx1	SINE/Alu	14	306	(6)	4012859
13	12.1	0.0	3.5	chr9	2923908	2923936	(135470781)	+	(CTGTG)n	Simple_repeat	1	29	(0)	4012860
442	25.9	18.3	2.3	chr9	2924140	2924313	(135470404)	+	MER63A	DNA/hAT-Blackjack	3	210	(0)	4012861
20	26.7	1.2	4.7	chr9	4490480	4490563	(133904154)	+	(GGC)n	Simple_repeat	1	85	(0)	4015146
1778	7.0	0.5	0.0	chr9	6772152	6772366	(131622351)	C	AluSx1	SINE/Alu	(14)	298	83	4018722
303	30.7	4.5	4.5	chr9	7284556	7284688	(131110029)	+	MamGypLTR3a	LTR/Gypsy	53	185	(796)	4019501
230	23.9	15.4	1.1	chr9	7284713	7284801	(131109916)	+	MamGypLTR3a	LTR/Gypsy	250	353	(628)	4019501
631	7.7	0.0	0.0	chr9	7284965	7285042	(131109675)	C	MADE1	DNA/TcMar-Mariner	(0)	80	3	4019502
374	31.9	8.8	4.6	chr9	7285074	7285313	(131109404)	+	MamGypLTR3a	LTR/Gypsy	618	868	(113)	4019501
12	18.5	11.1	1.4	chr9	14693201	14693263	(123701454)	+	(CGCT)n	Simple_repeat	1	70	(0)	4029305
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
14	13.7	3.1	0.0	chr9	15511251	15511282	(122883435)	+	(TGTGTA)n	Simple_repeat	1	33	(0)	4030659
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
251	22.1	1.4	1.4	chr9	16810583	16810651	(121584066)	+	MER112	DNA/hAT-Charlie	1	69	(192)	4032408
2971	20.3	13.0	2.7	chr9	23088890	23089814	(115304903)	C	LTR28C	LTR/ERV1	(0)	1020	1	4041359
13	20.4	0.0	4.7	chr9	27771881	27771926	(110622791)	+	(TCTTTC)n	Simple_repeat	1	43	(0)	4047650
1530	15.1	8.3	0.7	chr9	33290031	33290308	(105104409)	+	AluJr	SINE/Alu	2	302	(10)	4055139
2531	29.2	7.3	8.4	chr9	34197850	34199057	(104195660)	C	L1M3b	LINE/L1	(5070)	1211	11	4056971
12	24.7	1.4	8.1	chr9	34380815	34380887	(104013830)	+	(GGCGG)n	Simple_repeat	1	74	(0)	4057338
65	30.5	5.1	3.3	chr9	34548266	34548672	(103846045)	+	(ACAGAG)n	Simple_repeat	1	417	(0)	4057611
14	6.0	11.4	0.0	chr9	34637661	34637695	(103757022)	+	(CGGCCCA)n	Simple_repeat	1	39	(0)	4057709
12	19.3	6.1	5.7	chr9	34637696	34637723	(103756994)	+	(GCACGGC)n	Simple_repeat	4	70	(0)	4057710
248	35.5	11.8	4.4	chr9	34637992	34638404	(103756313)	C	L2c	LINE/L2	(27)	3360	2913	4057711
634	16.8	12.3	0.0	chr9	34651699	34651841	(103742876)	C	MER5B	DNA/hAT-Charlie	(15)	163	1	4057742
12	12.8	5.6	2.6	chr9	34652039	34652074	(103742643)	+	(GGTGGA)n	Simple_repeat	1	38	(0)	4057743
23	17.4	2.9	4.2	chr9	34652148	34652217	(103742500)	+	(GCGAGG)n	Simple_repeat	1	72	(0)	4057744
20	6.9	0.0	0.0	chr9	35072557	35072587	(103322130)	+	(GGCAGC)n	Simple_repeat	1	31	(0)	4058317
21	9.5	0.0	0.0	chr9	35489590	35489623	(102905094)	+	(CCCAC)n	Simple_repeat	1	34	(0)	4058938
416	29.5	0.0	1.8	chr9	35658839	35658952	(102735765)	+	MIRc	SINE/MIR	125	236	(32)	4059252
309	23.5	8.6	2.3	chr9	35658985	35659071	(102735646)	C	MIR	SINE/MIR	(147)	115	23	4059253
16	14.2	0.0	0.0	chr9	35665364	35665394	(102729323)	+	(GCAGG)n	Simple_repeat	1	31	(0)	4059258
17	27.8	0.0	5.3	chr9	35846366	35846441	(102548276)	+	G-rich	Low_complexity	1	76	(0)	4059510
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
244	29.1	10.6	0.0	chr9	37485444	37485570	(100909147)	+	MER115	DNA/hAT-Tip100	252	393	(300)	4062762
369	26.9	2.9	5.0	chr9	37485575	37485715	(100909002)	+	MER115	DNA/hAT-Tip100	450	587	(106)	4062763
292	33.3	5.0	3.5	chr9	37576487	37576741	(100817976)	+	L3	LINE/CR1	3736	3994	(105)	4062961
14	16.4	5.8	3.6	chr9	38424241	38424292	(99970425)	+	G-rich	Low_complexity	1	55	(0)	4064578
28	15.5	0.0	0.0	chr9	38424359	38424409	(99970308)	+	(CAG)n	Simple_repeat	1	51	(0)	4064579
13	19.7	1.6	8.1	chr9	38424451	38424511	(99970206)	+	(CTCCG)n	Simple_repeat	1	62	(0)	4064580
12	20.6	8.0	0.0	chr9	38424538	38424587	(99970130)	+	(GCCCGCA)n	Simple_repeat	1	54	(0)	4064581
8223	6.3	0.2	2.1	chr9	66269162	66270420	(72124297)	+	SST1	Satellite/centr	1	1235	(327)	4077378
16	24.1	4.6	1.5	chr9	69121622	69121686	(69273031)	+	(GCCCAGC)n	Simple_repeat	1	68	(0)	4081046
5015	9.7	0.9	0.2	chr9	69306939	69307567	(69087150)	C	MER41B	LTR/ERV1	(0)	634	1	4081410
11	13.8	2.8	5.4	chr9	70258925	70258960	(68135757)	+	(GCGCGA)n	Simple_repeat	1	37	(0)	4082831
2359	7.2	0.7	1.3	chr9	70417918	70418223	(67976494)	C	AluSx	SINE/Alu	(8)	304	1	4083110
186	24.4	0.0	0.0	chr9	70418275	70418315	(67976402)	C	MER5A	DNA/hAT-Charlie	(52)	137	97	4083111
226	15.6	4.3	4.3	chr9	70418361	70418407	(67976310)	C	MER5A	DNA/hAT-Charlie	(30)	159	113	4083112
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
13	5.3	0.0	0.0	chr9	74952304	74952323	(63442394)	+	(GGC)n	Simple_repeat	1	20	(0)	4090268
3145	19.5	6.7	2.3	chr9	77631790	77633008	(60761709)	+	MER52A	LTR/ERV1	1	1753	(2)	4094567
409	37.8	0.9	0.0	chr9	80410246	80410462	(57984255)	C	UCON89	DNA/hAT?	(23)	219	1	4098566
180	18.2	0.0	0.0	chr9	83623330	83623362	(54771355)	C	MIR3	SINE/MIR	(60)	148	116	4103206
2693	21.4	0.9	0.9	chr9	84862587	84863142	(53531575)	C	MER74A	LTR/ERVL	(2)	556	1	4105374
31	14.4	1.6	1.6	chr9	85741887	85741949	(52652768)	+	(CGG)n	Simple_repeat	1	64	(0)	4106656
13	17.6	2.4	4.7	chr9	85742036	85742077	(52652640)	+	G-rich	Low_complexity	1	43	(0)	4106657
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
13	21.6	0.0	0.0	chr9	86945965	86945996	(51448721)	+	(TCG)n	Simple_repeat	1	32	(0)	4108700
17	33.9	0.0	2.5	chr9	88534237	88534317	(49860400)	+	GA-rich	Low_complexity	1	81	(0)	4111361
589	16.5	5.8	2.5	chr9	89253217	89254765	(49139952)	+	(TG)n	Simple_repeat	1	1639	(0)	4112289
345	25.0	9.6	0.0	chr9	89593377	89593480	(48801237)	+	L2b	LINE/L2	3248	3362	(13)	4112718
13	22.6	2.4	0.0	chr9	89604346	89604386	(48790331)	+	(CCCCG)n	Simple_repeat	1	42	(0)	4112729
12	12.8	8.8	0.0	chr9	89678719	89678752	(48715965)	+	(GCAG)n	Simple_repeat	1	37	(0)	4112803
233	18.5	6.7	1.4	chr9	90162321	90162973	(48231744)	+	(AC)n	Simple_repeat	1	697	(0)	4113489
237	29.6	2.7	0.0	chr9	93095351	93095421	(45299296)	+	MIRc	SINE/MIR	77	149	(119)	4117709
381	32.4	10.1	0.0	chr9	93159728	93159897	(45234820)	+	MIRb	SINE/MIR	42	230	(38)	4117824
3321	13.2	10.2	5.4	chr9	93160252	93160395	(45234322)	+	L1MB7	LINE/L1	5110	5270	(876)	4117825
2341	8.7	0.0	1.0	chr9	93160396	93160695	(45234022)	C	AluSq	SINE/Alu	(16)	297	1	4117826
13	13.2	6.1	0.0	chr9	93566861	93566893	(44827824)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	4118315
302	37.3	3.2	0.0	chr9	93826062	93826273	(44568444)	C	MIR	SINE/MIR	(27)	235	17	4118617
26	3.4	0.0	0.0	chr9	93955404	93955433	(44439284)	+	(CCGCC)n	Simple_repeat	1	30	(0)	4118816
14	17.2	5.1	0.0	chr9	93955457	93955495	(44439222)	+	GA-rich	Low_complexity	1	41	(0)	4118817
648	19.8	14.7	0.4	chr9	95127353	95127591	(43267126)	C	MER1B	DNA/hAT-Charlie	(4)	335	57	4120734
18	29.8	2.5	1.2	chr9	96450417	96450495	(41944222)	+	(GCG)n	Simple_repeat	1	81	(0)	4122913
242	18.3	4.8	4.8	chr9	97013943	97014005	(41380712)	+	MER103C	DNA/hAT-Charlie	180	242	(55)	4123850
262	23.1	10.8	1.1	chr9	97013969	97014060	(41380657)	C	MER103C	DNA/hAT-Charlie	(193)	104	3	4123851
308	28.4	11.8	9.7	chr9	97696884	97697140	(40697577)	C	L1M4b	LINE/L1	(6203)	664	402	4124935
269	29.9	5.9	4.6	chr9	97803899	97804115	(40590602)	+	MIRb	SINE/MIR	40	259	(9)	4125172
311	25.4	4.2	0.0	chr9	97804125	97804259	(40590458)	+	MIR3	SINE/MIR	27	174	(56)	4125173
986	18.1	0.0	0.0	chr9	98218693	98218847	(40175870)	C	AluSx3	SINE/Alu	(14)	297	143	4126096
17	0.0	0.0	0.0	chr9	99821691	99821741	(38572976)	+	(CG)n	Simple_repeat	1	51	(0)	4129131
282	29.5	0.0	0.0	chr9	104863891	104863968	(33530749)	C	MER5B	DNA/hAT-Charlie	(32)	146	69	4136365
1321	21.0	5.7	1.9	chr9	104992996	104993315	(33401402)	C	MLT1A	LTR/ERVL-MaLR	(41)	333	1	4136646
20	24.4	2.6	3.8	chr9	105656220	105656297	(32738420)	+	(GGC)n	Simple_repeat	1	80	(0)	4137861
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
14	24.5	2.3	0.0	chr9	107487983	107488025	(30906692)	+	(CGA)n	Simple_repeat	1	44	(0)	4140833
12	18.4	5.4	0.0	chr9	108933745	108933781	(29460936)	+	(GCAGCCC)n	Simple_repeat	1	39	(0)	4143525
264	12.8	2.1	0.0	chr9	109498520	109498566	(28896151)	C	L2b	LINE/L2	(3)	3372	3325	4144623
185	29.4	0.0	0.0	chr9	109498650	109498700	(28896017)	C	MIRc	SINE/MIR	(207)	61	11	4144624
384	27.4	11.5	4.2	chr9	109498742	109499030	(28895687)	+	L2a	LINE/L2	2933	3245	(181)	4144625
18	3.8	0.0	3.5	chr9	109499842	109499870	(28894847)	+	(GCCCG)n	Simple_repeat	1	29	(0)	4144628
23237	7.1	1.2	0.4	chr9	109660208	109666322	(28728395)	C	L1PA8	LINE/L1	(11)	6161	5	4144928
16	30.0	1.4	2.7	chr9	110115259	110115331	(28279386)	+	G-rich	Low_complexity	1	74	(0)	4145700
1363	22.9	5.2	6.4	chr9	111106500	111106965	(27287752)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	8	4147318
257	13.3	0.0	0.0	chr9	111599825	111599869	(26794848)	+	MER4-int	LTR/ERV1	1116	1160	(5438)	4148189
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
1497	16.2	13.9	0.0	chr9	111887081	111887333	(26507384)	C	AluJb	SINE/Alu	(18)	294	1	4148732
15	33.6	0.0	0.0	chr9	111887629	111887672	(26507045)	+	(AT)n	Simple_repeat	1	44	(0)	4148733
828	18.8	0.0	0.0	chr9	111887696	111887812	(26506905)	C	AluJo	SINE/Alu	(195)	117	1	4148734
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
851	12.0	0.8	0.8	chr9	114610940	114611064	(23783653)	+	AluJr	SINE/Alu	1	125	(187)	4154051
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
27884	2.5	0.5	0.2	chr9	119169117	119175132	(19219585)	+	L1PA2	LINE/L1	124	6155	(0)	4162480
11	13.9	2.0	10.0	chr9	120929026	120929074	(17465643)	+	G-rich	Low_complexity	1	50	(0)	4166014
368	28.0	9.4	7.5	chr9	122221858	122222085	(16172632)	+	MIR	SINE/MIR	14	246	(16)	4168581
569	25.4	7.8	5.0	chr9	123269135	123269333	(15125384)	+	MIRb	SINE/MIR	48	252	(16)	4170360
16	14.3	0.0	6.8	chr9	123373591	123373634	(15021083)	+	(CGGCC)n	Simple_repeat	1	44	(0)	4170615
253	29.8	4.2	0.0	chr9	123373984	123374096	(15020621)	+	MIR3	SINE/MIR	82	202	(28)	4170616
24	30.5	1.7	3.3	chr9	124011383	124011501	(14383216)	+	(CTCCCTC)n	Simple_repeat	1	121	(0)	4171699
41	6.1	0.0	0.0	chr9	124011714	124011764	(14382953)	+	(CTC)n	Simple_repeat	1	51	(0)	4171700
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
2731	9.6	0.3	1.4	chr9	124110665	124111032	(14283685)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4171952
1048	14.8	11.7	0.0	chr9	124860847	124861042	(13533675)	C	AluJo	SINE/Alu	(17)	295	74	4173410
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
15	12.0	0.0	0.0	chr9	125746549	125746575	(12648142)	+	(CGG)n	Simple_repeat	1	27	(0)	4175276
598	22.7	2.8	0.0	chr9	126500512	126500652	(11894065)	+	MER5A1	DNA/hAT-Charlie	18	162	(4)	4176479
24	3.2	3.1	0.0	chr9	126612050	126612081	(11782636)	+	(CA)n	Simple_repeat	1	33	(0)	4176708
1772	12.2	0.8	0.0	chr9	127445810	127446047	(10948670)	+	AluSg	SINE/Alu	53	292	(18)	4178226
1150	21.0	9.5	0.4	chr9	127446349	127446605	(10948112)	C	AluJr4	SINE/Alu	(26)	286	4	4178227
200	30.9	4.7	1.2	chr9	127451080	127451161	(10943556)	C	MIR3	SINE/MIR	(43)	165	81	4178232
183	35.1	1.8	4.3	chr9	127897588	127897703	(10497014)	C	MIR3	SINE/MIR	(48)	160	48	4179278
729	22.1	1.7	0.2	chr9	127897919	127898088	(10496629)	+	MIR	SINE/MIR	38	214	(54)	4179279
360	30.6	18.0	0.9	chr9	128365361	128365571	(10029146)	+	MIRb	SINE/MIR	3	257	(11)	4180351
2426	7.0	1.0	0.0	chr9	128419868	128420167	(9974550)	C	AluSx1	SINE/Alu	(9)	303	1	4180476
13	25.1	3.9	4.9	chr9	128552302	128552379	(9842338)	+	(CCCTCGC)n	Simple_repeat	1	81	(0)	4180816
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
2376	5.2	1.7	0.7	chr9	128887652	128887940	(9506777)	C	AluY	SINE/Alu	(18)	293	2	4181574
455	29.4	1.8	2.2	chr9	129556476	129556706	(8838011)	C	L2b	LINE/L2	(197)	3229	2997	4183122
285	34.0	8.1	1.0	chr9	129556812	129557016	(8837701)	+	L1ME2	LINE/L1	5788	6008	(156)	4183123
695	23.5	2.6	9.8	chr9	129719516	129719704	(8675013)	+	MIR	SINE/MIR	22	194	(68)	4183481
209	34.7	2.7	0.0	chr9	130692327	130692398	(7702319)	+	MIRb	SINE/MIR	115	188	(80)	4185601
293	31.8	9.3	4.9	chr9	130701629	130701853	(7692864)	C	MamSINE1	SINE/tRNA-RTE	(29)	261	26	4185615
2146	7.2	0.4	0.0	chr9	131372738	131373015	(7021702)	C	AluSg	SINE/Alu	(31)	279	1	4186946
320	32.7	3.2	1.9	chr9	131776501	131776656	(6618061)	C	MIR3	SINE/MIR	(7)	201	44	4187689
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
759	12.0	4.0	7.2	chr9	133031186	133031338	(5363379)	C	LTR10B	LTR/ERV1	(0)	547	400	4189956
1461	10.1	0.4	0.9	chr9	133031340	133031568	(5363149)	C	AluSx	SINE/Alu	(1)	311	84	4189957
444	18.7	3.6	0.0	chr9	133430231	133430337	(4964380)	+	MER45A	DNA/hAT-Tip100	68	178	(0)	4190562
44	4.4	0.0	0.0	chr9	133533151	133533197	(4861520)	+	(GT)n	Simple_repeat	1	47	(0)	4190732
213	31.7	11.5	0.8	chr9	133533255	133533378	(4861339)	+	MIRc	SINE/MIR	31	169	(99)	4190733
235	32.9	6.0	0.0	chr9	133533465	133533543	(4861174)	+	MIRc	SINE/MIR	96	179	(89)	4190734
432	28.1	12.6	1.5	chr9	133609631	133609826	(4784891)	+	MIRb	SINE/MIR	49	268	(0)	4190835
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
201	33.5	16.0	2.0	chr9	134163183	134163578	(4231139)	+	L2b	LINE/L2	2484	2945	(474)	4191663
2052	4.5	0.0	0.0	chr9	135412345	135412586	(2982131)	+	L1PA4	LINE/L1	5911	6152	(3)	4193176
22	21.2	4.2	7.3	chr9	135907576	135907694	(2487023)	+	(GCCCC)n	Simple_repeat	1	124	(0)	4193766
11	17.1	2.9	2.8	chr9	136363573	136363607	(2031110)	+	(GCCCCA)n	Simple_repeat	1	36	(0)	4194302
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
236	23.7	8.5	1.7	chr9	136400372	136400491	(1994226)	+	MIRb	SINE/MIR	18	146	(122)	4194334
17	22.2	2.8	5.5	chr9	136439816	136439886	(1954831)	+	(GCCCC)n	Simple_repeat	1	73	(0)	4194378
292	32.6	14.0	0.0	chr9	136568086	136568392	(1826325)	+	L1MB5	LINE/L1	5818	6174	(0)	4194500
20	21.8	5.4	4.1	chr9	136847354	136847445	(1547272)	+	(GCCCA)n	Simple_repeat	1	97	(0)	4194873
31	12.2	3.8	4.9	chr9	136849629	136849707	(1545010)	+	(GGCGG)n	Simple_repeat	1	82	(0)	4194876
17	22.3	6.0	3.4	chr9	136866032	136866114	(1528603)	+	(CCAGCCC)n	Simple_repeat	1	88	(0)	4194887
14	14.2	0.0	3.0	chr9	136866127	136866159	(1528558)	+	(CCCGG)n	Simple_repeat	1	33	(0)	4194888
13	5.3	0.0	0.0	chr9	137087114	137087133	(1307584)	+	(CCG)n	Simple_repeat	1	20	(0)	4195210
18	30.2	1.2	2.5	chrX	2500555	2500634	(153540261)	+	G-rich	Low_complexity	1	81	(0)	4362996
669	22.3	2.5	4.5	chrX	13131368	13131569	(142909326)	C	LTR37B	LTR/ERV1	(267)	201	4	4380673
15	8.8	0.0	0.0	chrX	21374132	21374155	(134666740)	+	(CGC)n	Simple_repeat	1	24	(0)	4394393
702	18.0	3.5	8.7	chrX	23743552	23743611	(132297284)	C	MER5B	DNA/hAT-Charlie	(5)	173	123	4397948
2318	9.3	0.7	0.0	chrX	23743612	23743911	(132296984)	+	AluSx1	SINE/Alu	1	302	(10)	4397949
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
22	13.1	6.0	0.0	chrX	38804021	38804070	(117236825)	+	(CCTGC)n	Simple_repeat	1	53	(0)	4419535
195	26.1	0.0	0.0	chrX	40474005	40474050	(115566845)	+	L3b	LINE/CR1	4998	5043	(189)	4422529
12	20.1	4.1	3.9	chrX	47619918	47619966	(108420929)	+	(CGCGG)n	Simple_repeat	1	51	(0)	4434536
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
48	5.6	0.0	0.0	chrX	72238944	72239000	(83801895)	+	(GGAGCTT)n	Simple_repeat	1	57	(0)	4462954
2446	8.1	0.0	0.7	chrX	72239489	72239795	(83801100)	+	AluSx3	SINE/Alu	1	305	(6)	4462955
52	22.0	0.8	0.0	chrX	73563335	73563363	(82477532)	+	GA-rich	Low_complexity	1	29	(0)	4464581
29	3.2	0.0	0.0	chrX	73563364	73563395	(82477500)	+	(CGT)n	Simple_repeat	1	32	(0)	4464582
52	22.0	0.8	0.0	chrX	73563396	73563487	(82477408)	+	GA-rich	Low_complexity	30	122	(0)	4464583
12	13.6	6.8	4.3	chrX	74924493	74924536	(81116359)	+	(CCATGC)n	Simple_repeat	1	47	(0)	4466272
16	21.3	2.6	0.0	chrX	85243850	85243887	(70797008)	+	(GC)n	Simple_repeat	1	39	(0)	4476826
43	4.3	0.0	0.0	chrX	85244124	85244171	(70796724)	+	(GGC)n	Simple_repeat	1	48	(0)	4476827
13	6.8	5.7	5.4	chrX	101408418	101408452	(54632443)	+	(CCCT)n	Simple_repeat	1	37	(0)	4495991
31	7.5	0.0	0.0	chrX	101932397	101932439	(54108456)	+	(T)n	Simple_repeat	1	43	(0)	4496660
18	21.6	2.1	0.0	chrX	135022461	135022508	(21018387)	+	(GCGCT)n	Simple_repeat	1	49	(0)	4543827