4015	14.3	0.8	0.1	chr1	816629	817288	(248139134)	+	L1P4	LINE/L1	4623	5286	(860)	1057
18	27.1	1.1	5.6	chr1	827542	827629	(248128793)	+	G-rich	Low_complexity	1	89	(0)	1063
2888	19.3	8.0	0.0	chr1	1109720	1110352	(247846070)	C	MER49	LTR/ERV1	(235)	688	1	1372
13	18.8	4.5	2.2	chr1	1116008	1116051	(247840371)	+	(CCCCAGC)n	Simple_repeat	1	46	(0)	1381
15	15.5	7.0	0.0	chr1	1116237	1116279	(247840143)	+	G-rich	Low_complexity	1	46	(0)	1382
18	0.0	0.0	3.7	chr1	1349507	1349548	(247606874)	+	(CGCCC)n	Simple_repeat	1	40	(0)	1606
15	19.8	7.5	2.8	chr1	1407559	1407625	(247548797)	+	G-rich	Low_complexity	1	72	(0)	1698
372	23.5	7.5	0.7	chr1	1422514	1422650	(247533772)	C	LTR75	LTR/ERVL	(294)	268	122	1721
3836	13.6	5.4	0.8	chr1	1422773	1423374	(247533048)	+	MER41B	LTR/ERV1	4	634	(0)	1722
15	20.2	2.1	2.1	chr1	1471604	1471650	(247484772)	+	(CCCCGCC)n	Simple_repeat	1	48	(0)	1800
8217	5.2	2.0	0.5	chr1	1504966	1505957	(247450465)	C	LTR13	LTR/ERVK	(0)	1007	1	1868
2274	12.6	0.0	1.3	chr1	1609533	1609849	(247346573)	+	AluSq	SINE/Alu	1	313	(0)	2050
368	19.1	4.5	0.0	chr1	1609966	1610049	(247346373)	+	MER65D	LTR/ERV1	1	88	(443)	2051
400	36.0	3.6	4.0	chr1	1610095	1610181	(247346241)	+	MER65D	LTR/ERV1	181	266	(207)	2051
13	17.1	2.3	4.5	chr1	1615445	1615487	(247340935)	+	G-rich	Low_complexity	1	44	(0)	2066
1386	23.6	10.9	6.3	chr1	1858667	1859016	(247097406)	+	MER119	DNA/hAT-Charlie	31	411	(172)	2482
23	14.7	1.4	7.1	chr1	1891109	1891186	(247065236)	+	(CACGCG)n	Simple_repeat	1	73	(0)	2570
2208	14.0	0.0	0.0	chr1	1995977	1996284	(246960138)	C	AluSx	SINE/Alu	(4)	308	1	2724
14	26.9	4.8	0.0	chr1	2180474	2180535	(246775887)	+	(GACGCG)n	Simple_repeat	1	65	(0)	2966
12	18.5	3.6	6.9	chr1	2412373	2412428	(246543994)	+	(GCCGCGC)n	Simple_repeat	1	58	(0)	3202
35	25.6	1.6	7.4	chr1	2412623	2412808	(246543614)	+	G-rich	Low_complexity	1	189	(0)	3203
34	11.8	10.6	1.0	chr1	2526358	2526451	(246429971)	+	(GCCCGCC)n	Simple_repeat	1	104	(0)	3281
13	27.7	1.9	1.8	chr1	3313306	3313359	(245643063)	+	(AGCGGAG)n	Simple_repeat	1	55	(0)	3901
16	3.3	0.0	10.0	chr1	3796670	3796691	(245159731)	+	(GGGTG)n	Simple_repeat	1	19	(0)	4362
4056	13.3	0.5	8.9	chr1	3796692	3797417	(245159005)	C	MER4A	LTR/ERV1	(0)	664	1	4363
376	16.4	0.0	1.5	chr1	5348760	5348827	(243607595)	+	MLT1C	LTR/ERVL-MaLR	401	467	(0)	6621
760	27.2	8.4	0.7	chr1	5917743	5918090	(243038332)	+	MLT1I	LTR/ERVL-MaLR	23	447	(1)	7424
243	29.9	5.3	2.7	chr1	6200396	6200505	(242755917)	+	L2b	LINE/L2	1113	1225	(2194)	7813
743	18.6	27.0	0.8	chr1	6200566	6201073	(242755349)	+	LTR50	LTR/ERVL	29	793	(2)	7815
283	25.3	6.7	0.0	chr1	6205242	6205324	(242751098)	C	MIR3	SINE/MIR	(84)	124	36	7831
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
854	28.3	24.1	1.3	chr1	7011996	7013203	(241943219)	+	L2c	LINE/L2	1167	2757	(662)	9274
14	16.2	0.0	0.0	chr1	7771353	7771380	(241185042)	+	(CGC)n	Simple_repeat	1	28	(0)	10295
12	13.7	0.0	0.0	chr1	7961691	7961714	(240994708)	+	(GCGT)n	Simple_repeat	1	24	(0)	10655
4092	8.5	1.8	0.2	chr1	8122631	8123171	(240833251)	C	MER41A	LTR/ERV1	(4)	550	1	10968
1017	30.8	8.9	2.4	chr1	8123172	8123386	(240833036)	C	L1MC4	LINE/L1	(242)	7800	7553	10967
3199	8.2	4.9	0.7	chr1	8626417	8626881	(240329541)	+	LTR19A	LTR/ERV1	1	486	(0)	11952
17410	15.9	5.1	4.1	chr1	9299983	9301207	(239655215)	+	ERVL-B4-int	LTR/ERVL	2712	3911	(1803)	13330
2327	8.4	2.3	0.0	chr1	9522259	9522557	(239433865)	+	AluSx1	SINE/Alu	1	306	(6)	13790
2784	14.8	4.9	5.3	chr1	9522558	9522875	(239433547)	+	L1MB3	LINE/L1	5830	6141	(42)	13788
221	24.8	16.8	1.5	chr1	9718362	9718492	(239237930)	C	MIR3	SINE/MIR	(4)	204	50	14242
12	13.7	6.2	0.0	chr1	9719316	9719347	(239237075)	+	(GCTGG)n	Simple_repeat	1	34	(0)	14243
2305	9.8	0.0	0.3	chr1	9719379	9719674	(239236748)	+	AluSx3	SINE/Alu	1	295	(16)	14244
4508	11.4	0.9	0.3	chr1	9774666	9775292	(239181130)	C	MER41B	LTR/ERV1	(3)	631	1	14350
299	30.4	6.4	4.8	chr1	9775293	9775376	(239181046)	+	MIRb	SINE/MIR	120	208	(22)	14349
546	24.3	13.2	0.7	chr1	9929833	9929977	(239026445)	+	MIR3	SINE/MIR	32	197	(11)	14655
13	16.3	2.8	2.7	chr1	11060049	11060084	(237896338)	+	G-rich	Low_complexity	1	37	(0)	16951
22	9.0	3.8	5.5	chr1	11060218	11060270	(237896152)	+	G-rich	Low_complexity	1	55	(0)	16952
25	17.8	0.0	0.0	chr1	11790901	11790945	(237165477)	+	(AC)n	Simple_repeat	1	45	(0)	18465
1818	15.3	0.3	6.2	chr1	11797293	11797612	(237158810)	C	AluJr	SINE/Alu	(11)	301	1	18475
269	30.6	0.0	1.2	chr1	11797752	11797837	(237158585)	+	L3	LINE/CR1	4008	4092	(7)	18473
527	28.1	12.0	1.5	chr1	11798612	11798728	(237157694)	C	Charlie16a	DNA/hAT-Charlie	(0)	342	210	18477
2368	9.3	0.0	1.0	chr1	11798729	11799041	(237157381)	C	AluSg	SINE/Alu	(0)	310	1	18478
215	31.5	11.5	0.0	chr1	11881106	11881213	(237075209)	C	MIR	SINE/MIR	(138)	124	3	18634
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
515	31.2	3.1	7.0	chr1	11983371	11983471	(236972951)	+	MER103C	DNA/hAT-Charlie	203	297	(0)	18893
326	29.6	0.6	4.2	chr1	12038702	12038825	(236917597)	+	MIR	SINE/MIR	32	153	(115)	19015
465	20.5	2.4	13.5	chr1	12075463	12075654	(236880768)	C	MLT1D	LTR/ERVL-MaLR	(274)	231	62	19088
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
239	31.8	1.1	5.4	chr1	12408015	12408107	(236548315)	+	MIRc	SINE/MIR	88	176	(92)	19748
19	4.3	0.0	0.0	chr1	12408318	12408341	(236548081)	+	(AG)n	Simple_repeat	1	24	(0)	19749
611	24.7	6.6	4.5	chr1	12472117	12472294	(236484128)	C	HAL1	LINE/L1	(1584)	923	742	19840
455	29.1	13.1	5.7	chr1	12472327	12472698	(236483724)	C	HAL1	LINE/L1	(2082)	425	22	19840
244	23.0	18.7	2.0	chr1	12529592	12529693	(236426729)	C	L1ME4b	LINE/L1	(78)	814	692	19919
185	27.5	12.5	1.1	chr1	12604654	12604745	(236351677)	+	MIRb	SINE/MIR	14	117	(151)	20069
277	33.1	7.2	1.5	chr1	14424327	14424458	(234531964)	C	MIRb	SINE/MIR	(125)	143	3	23142
369	18.8	18.6	0.0	chr1	14424507	14424602	(234531820)	C	MER91C	DNA/hAT-Tip100	(0)	140	23	23143
367	31.7	12.8	1.0	chr1	14435349	14435644	(234520778)	+	LTR16C	LTR/ERVL	138	473	(16)	23165
219	21.2	13.2	0.0	chr1	14435687	14435752	(234520670)	+	MIR	SINE/MIR	86	161	(101)	23166
670	30.6	5.2	1.3	chr1	14590724	14590964	(234365458)	C	MIR	SINE/MIR	(10)	252	4	23475
3108	11.8	0.2	0.4	chr1	14777711	14778169	(234178253)	C	MER41B	LTR/ERV1	(155)	479	22	23836
1434	19.7	8.3	5.2	chr1	14778170	14778576	(234177846)	C	MER72	LTR/ERV1	(269)	402	1	23837
625	27.5	15.0	7.4	chr1	14778736	14779250	(234177172)	C	MLT1H1	LTR/ERVL-MaLR	(16)	563	3	23838
364	29.1	6.6	0.8	chr1	14785303	14785430	(234170992)	C	MLT1O	LTR/ERVL-MaLR	(323)	219	84	23851
545	25.0	0.0	0.0	chr1	14785632	14785739	(234170683)	+	MIR	SINE/MIR	84	191	(71)	23852
18	4.8	0.0	0.0	chr1	15154407	15154428	(233801994)	+	(GT)n	Simple_repeat	1	22	(0)	24656
19	6.5	0.0	5.6	chr1	15177689	15177724	(233778698)	+	(TTGA)n	Simple_repeat	1	36	(0)	24713
182	30.2	0.0	6.0	chr1	15177982	15178048	(233778374)	C	MIR1_Amn	SINE/MIR	(114)	116	54	24714
12	21.4	3.9	3.7	chr1	15524884	15524935	(233431487)	+	(CCCCGC)n	Simple_repeat	1	54	(0)	25467
1240	28.3	9.0	0.9	chr1	15543052	15543759	(233412663)	C	L2a	LINE/L2	(20)	3406	2647	25505
436	29.3	4.2	3.8	chr1	15543761	15543998	(233412424)	C	L2-1_AMi	LINE/L2	(540)	695	457	25506
841	25.7	4.1	1.9	chr1	15976264	15976536	(232979886)	C	MIRb	SINE/MIR	(1)	267	2	26437
326	25.8	4.0	0.0	chr1	16054340	16054436	(232901986)	C	MER91A	DNA/hAT-Tip100	(82)	114	14	26586
12	3.8	6.5	6.1	chr1	16076354	16076384	(232880038)	+	G-rich	Low_complexity	1	33	(0)	26629
497	24.8	9.8	9.0	chr1	16164128	16164371	(232792051)	+	L2a	LINE/L2	3179	3424	(2)	26821
296	31.6	6.8	0.7	chr1	16164414	16164550	(232791872)	+	MIR	SINE/MIR	73	218	(44)	26824
213	28.2	2.7	4.0	chr1	16237416	16237489	(232718933)	+	MIR	SINE/MIR	108	182	(48)	26999
13	16.9	0.0	0.0	chr1	16352430	16352456	(232603966)	+	(CGC)n	Simple_repeat	1	27	(0)	27273
17	23.9	3.1	4.5	chr1	16352475	16352538	(232603884)	+	(GC)n	Simple_repeat	1	66	(0)	27274
265	31.9	5.6	2.2	chr1	16514671	16514808	(232441614)	C	Charlie4a	DNA/hAT-Charlie	(4)	504	362	27678
3894	10.1	4.9	2.5	chr1	16518899	16519376	(232437046)	+	MER51D	LTR/ERV1	164	655	(2)	27688
2553	21.1	1.2	2.5	chr1	16519377	16519729	(232436693)	+	MER72	LTR/ERV1	161	504	(218)	27687
886	30.0	8.4	5.5	chr1	16614267	16614887	(232341535)	+	L2b	LINE/L2	2508	3162	(213)	27821
2041	16.7	0.0	1.0	chr1	16615322	16615632	(232340790)	+	AluJb	SINE/Alu	2	309	(3)	27822
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
2459	19.6	2.0	2.4	chr1	16890612	16890962	(232065460)	C	MER72	LTR/ERV1	(218)	504	161	28191
286	33.9	3.9	1.6	chr1	16895470	16895595	(232060827)	+	Charlie4a	DNA/hAT-Charlie	376	504	(4)	28203
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
424	26.2	6.4	3.7	chr1	17012090	17012262	(231944160)	+	MIRb	SINE/MIR	25	207	(61)	28482
4196	15.3	4.0	2.3	chr1	17360311	17360529	(231595893)	C	LTR62	LTR/ERVL	(487)	222	1	29249
2912	20.4	2.6	5.7	chr1	18421927	18422180	(230534242)	+	LTR49-int	LTR/ERV1	181	429	(7778)	31615
3179	14.4	6.5	12.3	chr1	18422181	18422855	(230533567)	+	MER41B	LTR/ERV1	2	634	(0)	31617
3629	15.5	0.2	0.2	chr1	18443197	18443753	(230512669)	C	MER41D	LTR/ERV1	(0)	557	1	31662
760	32.3	4.9	6.5	chr1	18443754	18443867	(230512555)	+	L2a	LINE/L2	2747	2845	(574)	31661
2072	14.9	0.3	0.0	chr1	18443868	18444169	(230512253)	+	AluSz6	SINE/Alu	1	303	(9)	31663
3599	18.8	4.3	2.1	chr1	19300565	19301036	(229655386)	C	L1MB8	LINE/L1	(37)	6141	5664	33393
2384	9.9	0.0	0.0	chr1	19301037	19301338	(229655084)	C	AluSx	SINE/Alu	(10)	302	1	33394
4569	10.0	0.8	1.7	chr1	19508778	19509281	(229447141)	C	MER41B	LTR/ERV1	(126)	508	1	33785
377	30.8	5.6	0.0	chr1	19597826	19597942	(229358480)	C	MIRc	SINE/MIR	(124)	144	21	34020
488	19.9	0.9	10.2	chr1	19870336	19870422	(229086000)	+	L1ME3Cz	LINE/L1	558	611	(386)	34678
44	2.3	0.0	0.0	chr1	21176568	21176611	(227779811)	+	(CGC)n	Simple_repeat	1	44	(0)	37302
245	28.7	12.8	3.4	chr1	21177346	21177493	(227778929)	C	MIRb	SINE/MIR	(45)	223	60	37303
42	0.0	0.0	0.0	chr1	21345885	21345920	(227610502)	+	(TG)n	Simple_repeat	1	36	(0)	37718
20	0.0	0.0	0.0	chr1	21345921	21345942	(227610480)	+	(CG)n	Simple_repeat	1	22	(0)	37719
324	30.3	3.0	5.2	chr1	21488594	21488815	(227467607)	C	L2b	LINE/L2	(217)	3158	2950	37998
350	30.1	3.5	3.5	chr1	21488966	21489137	(227467285)	C	L2b	LINE/L2	(675)	2744	2573	37998
532	28.1	15.5	0.0	chr1	21612934	21613118	(227343304)	+	MIRb	SINE/MIR	36	254	(14)	38288
463	23.6	0.8	0.0	chr1	21669510	21669632	(227286790)	C	MIR3	SINE/MIR	(61)	147	24	38433
1250	14.3	5.8	0.0	chr1	21676178	21676373	(227280049)	C	AluJb	SINE/Alu	(20)	292	85	38443
2017	9.4	0.0	0.4	chr1	21791927	21792182	(227164240)	+	AluY	SINE/Alu	1	255	(56)	38680
3255	15.4	3.0	4.9	chr1	21792183	21792255	(227164167)	C	MER41B	LTR/ERV1	(562)	72	1	38679
2405	10.1	0.0	0.0	chr1	21792385	21792690	(227163732)	C	AluSx	SINE/Alu	(6)	306	1	38681
195	36.1	3.2	14.8	chr1	21905067	21905149	(227051273)	+	L2a	LINE/L2	2842	2921	(498)	38919
43	5.8	1.9	0.0	chr1	21905150	21905203	(227051219)	+	(AC)n	Simple_repeat	1	55	(0)	38920
195	36.1	3.2	14.8	chr1	21905204	21905236	(227051186)	+	L2a	LINE/L2	2922	2935	(484)	38919
36	7.2	0.0	0.0	chr1	21905237	21905280	(227051142)	+	(AC)n	Simple_repeat	1	44	(0)	38921
274	28.8	7.9	3.7	chr1	21905281	21905457	(227050965)	+	L2a	LINE/L2	2936	3145	(281)	38919
182	38.1	8.5	0.0	chr1	21924573	21924669	(227031753)	C	MIRc	SINE/MIR	(120)	148	43	38969
260	33.8	16.1	1.4	chr1	21924831	21925052	(227031370)	+	L2c	LINE/L2	3057	3317	(70)	38970
17	15.1	6.8	0.0	chr1	23168708	23168751	(225787671)	+	(CCG)n	Simple_repeat	1	47	(0)	41760
185	18.9	0.0	0.0	chr1	23539751	23539787	(225416635)	C	MIRc	SINE/MIR	(127)	141	105	42682
198	18.6	11.5	0.0	chr1	23539786	23539852	(225416570)	+	MIR3	SINE/MIR	69	158	(72)	42683
275	35.6	0.0	0.0	chr1	23596330	23596416	(225360006)	+	L2b	LINE/L2	3289	3375	(0)	42835
4131	9.1	6.3	0.8	chr1	23596993	23597591	(225358831)	+	MER41B	LTR/ERV1	1	634	(0)	42837
395	26.6	0.0	0.0	chr1	23772400	23772478	(225183944)	C	Tigger5b	DNA/TcMar-Tigger	(393)	79	1	43327
1148	11.6	7.0	2.5	chr1	23772478	23772681	(225183741)	C	Tigger7	DNA/TcMar-Tigger	(2)	2489	2276	43328
16	21.7	0.0	0.0	chr1	23778331	23778362	(225178060)	+	(C)n	Simple_repeat	1	32	(0)	43345
197	19.2	3.7	1.9	chr1	23959014	23959066	(224997356)	C	L2b	LINE/L2	(2)	3373	3320	43810
1670	17.2	1.7	2.4	chr1	24762136	24762432	(224193990)	+	AluJr4	SINE/Alu	1	295	(17)	45687
1631	28.5	15.0	5.1	chr1	24762433	24762978	(224193444)	C	L2c	LINE/L2	(1117)	2302	1692	45686
326	21.4	2.2	5.3	chr1	24765217	24765310	(224191112)	C	MIR	SINE/MIR	(0)	262	172	45694
302	16.3	11.3	2.8	chr1	25239653	25239750	(223716672)	C	FRAM	SINE/Alu	(10)	156	79	46682
468	33.1	12.7	1.5	chr1	26049855	26050127	(222906295)	+	LTR16D1	LTR/ERVL	316	623	(52)	48424
3041	11.8	8.5	4.9	chr1	26050119	26050664	(222905758)	+	MER39B	LTR/ERV1	5	587	(66)	48425
704	25.7	2.8	5.1	chr1	26094553	26094769	(222861653)	C	MIRb	SINE/MIR	(0)	268	57	48551
207	25.0	4.0	0.0	chr1	26126809	26126856	(222829566)	+	MIRb	SINE/MIR	4	53	(215)	48624
2206	10.3	0.7	1.0	chr1	26126861	26127152	(222829270)	+	AluSq2	SINE/Alu	7	297	(16)	48625
427	27.9	5.8	8.7	chr1	26286998	26287149	(222669273)	C	MIRc	SINE/MIR	(101)	167	11	48981
290	17.5	3.1	0.0	chr1	26287248	26287310	(222669112)	C	Charlie24	DNA/hAT-Charlie	(11)	2439	2375	48983
293	29.8	5.8	5.3	chr1	26288571	26288740	(222667682)	+	MIRc	SINE/MIR	2	172	(96)	48986
358	32.0	1.6	0.8	chr1	26317630	26317752	(222638670)	C	MIRb	SINE/MIR	(141)	127	4	49055
2228	9.3	0.7	0.0	chr1	26408260	26408548	(222547874)	+	AluSz	SINE/Alu	1	291	(21)	49285
4122	9.0	2.0	0.9	chr1	26483724	26484149	(222472273)	C	MER41A	LTR/ERV1	(118)	436	1	49452
381	31.9	7.3	5.4	chr1	26484150	26484275	(222472147)	+	L2	LINE/L2	2518	2638	(781)	49451
393	25.0	7.5	0.8	chr1	26484284	26484408	(222472014)	C	L1MC5	LINE/L1	(10)	9294	9161	49454
26	0.0	0.0	0.0	chr1	26686060	26686084	(222270338)	+	(GTTTT)n	Simple_repeat	1	25	(0)	49988
2140	10.3	0.0	0.0	chr1	26686086	26686366	(222270056)	C	AluSx1	SINE/Alu	(31)	281	1	49989
639	22.0	3.6	0.0	chr1	26686369	26686500	(222269922)	C	FAM	SINE/Alu	(16)	169	33	49990
2411	8.8	0.0	0.3	chr1	26687401	26687705	(222268717)	+	AluSp	SINE/Alu	1	304	(9)	49992
1757	25.4	7.2	4.1	chr1	27021159	27021819	(221934603)	+	L2a	LINE/L2	847	1529	(1890)	50717
1037	10.3	14.6	0.0	chr1	27021825	27021998	(221934424)	+	MER41E	LTR/ERV1	7	210	(385)	50718
1386	17.3	4.0	0.7	chr1	27021999	27022302	(221934120)	+	MER61B	LTR/ERV1	1	398	(29)	50719
18	0.0	0.0	0.0	chr1	27155281	27155300	(221801122)	+	(A)n	Simple_repeat	1	20	(0)	51052
549	27.6	5.0	0.0	chr1	27155433	27155584	(221800838)	+	MIR	SINE/MIR	72	231	(31)	51053
207	31.0	5.8	5.8	chr1	27155583	27155652	(221800770)	C	MIR	SINE/MIR	(106)	156	90	51054
1834	19.5	9.8	1.4	chr1	27155653	27155909	(221800513)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	187	51055
15	13.4	0.0	10.0	chr1	27234576	27234625	(221721797)	+	(CGCAGG)n	Simple_repeat	1	50	(0)	51286
14	18.4	2.7	0.0	chr1	27392530	27392566	(221563856)	+	(GCCGC)n	Simple_repeat	1	38	(0)	51639
403	30.4	16.9	0.2	chr1	27542523	27542734	(221413688)	C	MIRb	SINE/MIR	(4)	258	8	52004
40	0.0	0.0	0.0	chr1	27660010	27660046	(221296376)	+	(CCGCCCCA)n	Simple_repeat	1	37	(0)	52242
17	5.2	0.0	14.6	chr1	27725927	27725981	(221230441)	+	(GCCC)n	Simple_repeat	1	55	(0)	52395
16	17.4	0.0	0.0	chr1	27773082	27773115	(221183307)	+	(CAGCCC)n	Simple_repeat	1	34	(0)	52509
981	14.9	1.8	0.0	chr1	28112628	28112795	(220843627)	C	MER5A	DNA/hAT-Charlie	(18)	171	1	53274
1029	16.2	6.6	0.0	chr1	28115180	28115407	(220841015)	+	L1M4	LINE/L1	3830	4073	(2073)	53279
673	12.0	16.1	7.2	chr1	28115416	28115549	(220840873)	+	L1MB7	LINE/L1	5966	6107	(77)	53280
2020	15.7	0.0	1.9	chr1	28115550	28115862	(220840560)	+	AluJb	SINE/Alu	5	311	(1)	53281
2226	7.8	3.1	0.3	chr1	28351164	28351446	(220604976)	C	AluSg4	SINE/Alu	(19)	291	1	53975
2271	10.5	0.0	0.0	chr1	28351447	28351741	(220604681)	C	AluSc8	SINE/Alu	(16)	295	1	53976
1655	24.2	5.9	6.9	chr1	28351745	28351970	(220604452)	C	HAL1	LINE/L1	(695)	1812	1611	53977
2366	4.7	0.0	0.0	chr1	28352001	28352274	(220604148)	C	AluY	SINE/Alu	(36)	275	2	53979
1655	24.2	5.9	6.9	chr1	28352275	28352596	(220603826)	C	HAL1	LINE/L1	(897)	1610	1270	53977
12	5.5	0.0	0.0	chr1	28416527	28416545	(220539877)	+	(GTA)n	Simple_repeat	1	19	(0)	54145
469	26.0	13.0	0.7	chr1	28416745	28416899	(220539523)	C	L1M5	LINE/L1	(903)	5243	5067	54146
1790	15.1	0.0	0.3	chr1	28505413	28505711	(220450711)	C	AluSz6	SINE/Alu	(13)	299	2	54373
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
310	31.2	6.9	4.3	chr1	28519028	28519305	(220437117)	C	L2b	LINE/L2	(161)	3214	2910	54412
54	26.6	0.8	0.0	chr1	28552293	28552418	(220404004)	+	(TG)n	Simple_repeat	1	127	(0)	54503
1930	10.6	0.4	0.0	chr1	28552425	28552699	(220403723)	C	AluSc	SINE/Alu	(33)	276	1	54504
1895	9.9	3.2	0.0	chr1	28589888	28590129	(220366293)	C	AluSc	SINE/Alu	(59)	250	1	54608
397	28.2	0.8	1.7	chr1	28590187	28590305	(220366117)	C	MIR	SINE/MIR	(79)	183	66	54609
372	29.2	0.0	0.0	chr1	28882364	28882459	(220073963)	+	MIRc	SINE/MIR	57	152	(116)	55396
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
358	30.1	15.4	1.2	chr1	28886575	28886798	(220069624)	C	MIRb	SINE/MIR	(6)	262	3	55409
3654	9.9	0.4	5.2	chr1	29156731	29157306	(219799116)	C	LTR14	LTR/ERVK	(0)	548	1	56047
614	28.6	8.7	0.9	chr1	29182217	29182438	(219773984)	+	MIRb	SINE/MIR	28	268	(0)	56089
182	30.6	0.0	0.0	chr1	30756942	30756990	(218199432)	C	MIR3	SINE/MIR	(104)	104	56	58993
230	24.7	9.9	0.0	chr1	30761732	30761804	(218194618)	C	MIRc	SINE/MIR	(144)	124	44	59003
287	36.6	0.7	5.6	chr1	30763479	30763620	(218192802)	+	MIR3	SINE/MIR	48	182	(26)	59008
225	12.7	4.2	0.0	chr1	30768494	30768538	(218187884)	+	MIR3	SINE/MIR	102	149	(59)	59020
276	27.8	1.8	0.9	chr1	30769533	30769641	(218186781)	+	MER102c	DNA/hAT-Charlie	213	322	(9)	59022
611	23.0	6.3	5.8	chr1	30777041	30777229	(218179193)	C	MIR	SINE/MIR	(60)	208	19	59038
326	30.7	11.3	0.2	chr1	30777173	30777357	(218179065)	+	MIRb	SINE/MIR	20	233	(35)	59039
12	11.6	3.3	3.2	chr1	30777505	30777534	(218178888)	+	G-rich	Low_complexity	1	31	(0)	59040
505	19.0	25.6	0.0	chr1	30778294	30778456	(218177966)	+	MIR	SINE/MIR	21	239	(23)	59041
667	27.5	4.6	11.8	chr1	30778486	30778840	(218177582)	+	MLT1K	LTR/ERVL-MaLR	101	428	(167)	59042
428	26.7	5.0	0.2	chr1	30778961	30779093	(218177329)	C	MIR	SINE/MIR	(42)	166	28	59043
271	28.6	3.2	0.0	chr1	30779487	30779577	(218176845)	C	MIRc	SINE/MIR	(101)	167	74	59045
2069	11.2	5.3	0.0	chr1	31070510	31070796	(217885626)	C	AluSz	SINE/Alu	(9)	303	1	59700
2927	19.7	2.2	12.8	chr1	31171162	31171364	(217785058)	+	LTR8	LTR/ERV1	1	192	(499)	60029
598	28.6	14.3	10.5	chr1	31483347	31484023	(217472399)	+	LTR84b	LTR/ERVL	54	757	(0)	60755
415	17.2	3.3	12.1	chr1	31826987	31827118	(217129304)	C	LTR16E1	LTR/ERVL	(1)	537	418	61399
552	27.6	16.6	2.2	chr1	31827153	31827419	(217129003)	C	LTR16E1	LTR/ERVL	(223)	315	3	61399
641	24.6	0.0	0.0	chr1	31827423	31827564	(217128858)	C	L1ME3B	LINE/L1	(626)	5617	5476	61397
16	12.1	2.5	4.9	chr1	31955077	31955117	(217001305)	+	(AGGC)n	Simple_repeat	1	40	(0)	61705
1528	19.9	2.6	3.6	chr1	32133399	32133705	(216822717)	+	AluJo	SINE/Alu	1	304	(8)	62177
717	17.0	1.1	17.8	chr1	32133706	32133762	(216822660)	+	L1M4c	LINE/L1	1582	1629	(4755)	62176
1484	10.6	0.5	0.0	chr1	32133763	32133960	(216822462)	+	AluSx1	SINE/Alu	5	203	(109)	62178
372	30.9	4.6	1.8	chr1	32179169	32179330	(216777092)	C	MIR3	SINE/MIR	(85)	183	20	62269
1712	18.2	0.7	0.7	chr1	32236065	32236351	(216720071)	+	Tigger7	DNA/TcMar-Tigger	12	298	(2193)	62364
899	12.8	5.1	0.0	chr1	32236349	32236497	(216719925)	+	Tigger7	DNA/TcMar-Tigger	2125	2281	(210)	62365
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
2168	10.9	0.3	0.0	chr1	33037556	33037838	(215918584)	+	AluSq2	SINE/Alu	1	284	(29)	64299
3196	21.1	4.7	8.3	chr1	35278720	35280084	(213676338)	C	MLT1C-int	LTR/ERVL-MaLR	(103)	1386	44	68443
19	20.7	5.4	5.2	chr1	35499741	35499832	(213456590)	+	(AACA)n	Simple_repeat	1	97	(0)	68880
255	38.1	5.3	1.7	chr1	35804582	35804816	(213151606)	C	L2	LINE/L2	(2853)	566	323	69511
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
465	27.5	16.3	0.9	chr1	36398030	36398345	(212558077)	C	L2a	LINE/L2	(1)	3425	3052	70782
1923	15.1	0.3	0.7	chr1	36398374	36398671	(212557751)	+	AluJb	SINE/Alu	1	297	(15)	70784
1216	14.2	8.2	2.7	chr1	36398672	36399065	(212557357)	+	LTR54	LTR/ERV1	25	489	(21)	70783
252	36.2	11.2	3.7	chr1	37514970	37515379	(211441043)	+	L2	LINE/L2	2428	2872	(547)	72895
2170	9.4	2.0	0.0	chr1	37554443	37554739	(211401683)	+	AluSz6	SINE/Alu	1	303	(9)	72993
213	25.1	4.1	7.0	chr1	37923139	37923294	(211033128)	C	L2b	LINE/L2	(4)	3422	3268	73719
283	26.6	9.2	2.7	chr1	38527467	38527578	(210428844)	+	MIRb	SINE/MIR	4	123	(145)	74830
2482	21.6	4.1	1.1	chr1	38527610	38528151	(210428271)	+	MLT1F2	LTR/ERVL-MaLR	1	559	(1)	74831
1512	17.0	5.1	6.5	chr1	38744452	38744790	(210211632)	+	MLT1A1	LTR/ERVL-MaLR	75	408	(0)	75242
1846	14.9	0.4	2.1	chr1	39025943	39026230	(209930192)	C	AluJb	SINE/Alu	(29)	283	1	75886
381	29.4	2.9	1.9	chr1	39575537	39575640	(209380782)	C	MIR	SINE/MIR	(157)	111	7	76948
524	24.9	12.8	3.8	chr1	40039338	40039550	(208916872)	+	MIRb	SINE/MIR	31	265	(3)	77994
13	25.2	0.0	2.3	chr1	40057497	40057540	(208898882)	+	(TTTCT)n	Simple_repeat	1	44	(0)	78033
681	32.5	1.5	0.5	chr1	40059793	40059984	(208896438)	C	MIR3	SINE/MIR	(12)	196	3	78038
226	35.7	9.3	3.8	chr1	40221362	40221492	(208734930)	C	L2a	LINE/L2	(139)	3248	3107	78370
2559	7.7	0.0	0.0	chr1	40221619	40221929	(208734493)	+	AluYk2	SINE/Alu	1	311	(0)	78377
34	0.0	0.0	0.0	chr1	40374597	40374625	(208581797)	+	(GT)n	Simple_repeat	1	29	(0)	78696
16	9.4	10.6	1.9	chr1	40374626	40374672	(208581750)	+	GA-rich	Low_complexity	1	52	(0)	78697
399	25.0	3.6	2.7	chr1	40802084	40802194	(208154228)	C	MIRb	SINE/MIR	(67)	201	90	79535
589	22.9	4.8	7.7	chr1	40876511	40876704	(208079718)	+	MLT1H2	LTR/ERVL-MaLR	287	474	(15)	79705
246	35.3	1.9	1.0	chr1	40974918	40975020	(207981402)	+	MIR	SINE/MIR	83	186	(76)	79975
193	24.7	8.6	4.5	chr1	40975065	40975153	(207981269)	C	MIR	SINE/MIR	(129)	133	41	79976
259	30.8	6.4	2.5	chr1	40975099	40975218	(207981204)	C	L2c	LINE/L2	(85)	3302	3178	79977
444	27.4	4.6	0.0	chr1	40975220	40975365	(207981057)	C	LTR16A1	LTR/ERVL	(0)	456	304	79978
659	28.9	8.9	2.2	chr1	41003502	41003731	(207952691)	+	MIR	SINE/MIR	13	259	(3)	80032
1066	24.9	13.7	1.6	chr1	41003737	41004160	(207952262)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	1	80033
363	27.7	6.0	6.7	chr1	41333336	41333624	(207622798)	+	MLT1K	LTR/ERVL-MaLR	5	354	(241)	80601
1028	27.5	5.9	3.9	chr1	41333749	41333928	(207622494)	C	L1ME4b	LINE/L1	(0)	892	716	80602
217	28.6	10.8	0.0	chr1	41432651	41432741	(207523681)	C	MIRb	SINE/MIR	(158)	110	9	80796
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
217	29.8	10.1	11.4	chr1	42942135	42942180	(206014242)	C	MamSINE1	SINE/tRNA-RTE	(108)	182	139	83395
413	29.5	6.3	4.1	chr1	42942181	42942344	(206014078)	+	MIRc	SINE/MIR	1	168	(94)	83396
528	19.3	20.2	1.2	chr1	42963707	42963874	(205992548)	+	L1ME3A	LINE/L1	5836	6043	(130)	83440
983	16.9	2.4	11.4	chr1	42963892	42964164	(205992258)	+	MER96B	DNA/hAT-Tip100	170	417	(0)	83441
370	27.7	7.7	4.8	chr1	42967416	42967599	(205988823)	+	MIR3	SINE/MIR	3	187	(21)	83454
448	28.5	9.3	5.7	chr1	42967635	42967861	(205988561)	C	MIR	SINE/MIR	(1)	261	26	83455
681	26.7	8.6	4.5	chr1	42980558	42981083	(205975339)	+	LTR48	LTR/ERV1	1	542	(0)	83488
3845	23.9	4.5	5.2	chr1	43044622	43045844	(205910578)	+	ERV3-16A3_I-int	LTR/ERVL	2233	3447	(1779)	83652
987	10.5	4.3	3.1	chr1	43414434	43414595	(205541827)	C	AluSg7	SINE/Alu	(22)	287	124	84301
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
1186	29.4	3.3	2.0	chr1	43711125	43711517	(205244905)	C	MLT1I	LTR/ERVL-MaLR	(12)	399	2	84756
1140	29.5	9.0	0.9	chr1	43834200	43834647	(205121775)	+	L2	LINE/L2	1713	2200	(1219)	85011
13	24.9	0.0	0.0	chr1	43946812	43946849	(205009573)	+	(GCCGG)n	Simple_repeat	1	38	(0)	85206
12	27.1	2.3	0.0	chr1	43974948	43974991	(204981431)	+	(GGAC)n	Simple_repeat	1	45	(0)	85234
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
731	16.3	0.0	2.8	chr1	44730545	44730685	(204225737)	+	AluJr	SINE/Alu	175	311	(1)	86587
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
2890	21.5	11.9	3.2	chr1	45444691	45445436	(203510986)	+	LTR8B	LTR/ERV1	1	820	(0)	88022
507	28.1	5.6	4.6	chr1	46442495	46442688	(202513734)	+	MIRb	SINE/MIR	46	241	(27)	90054
201	32.9	1.4	2.7	chr1	46544914	46544988	(202411434)	C	MIRb	SINE/MIR	(77)	191	118	90225
201	27.7	0.0	0.0	chr1	46545134	46545180	(202411242)	+	L2b	LINE/L2	3291	3337	(38)	90226
237	34.1	5.3	0.8	chr1	46546133	46546259	(202410163)	+	MIRc	SINE/MIR	15	147	(121)	90227
212	31.6	0.0	0.0	chr1	46546414	46546470	(202409952)	C	L2c	LINE/L2	(224)	3163	3107	90228
284	30.9	11.3	0.0	chr1	46674026	46674174	(202282248)	C	MIRb	SINE/MIR	(64)	204	37	90467
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
399	21.4	7.3	0.0	chr1	47233364	47233452	(201722970)	+	MIRb	SINE/MIR	105	200	(68)	91129
349	31.9	9.2	0.6	chr1	47233526	47233683	(201722739)	C	MIR1_Amn	SINE/MIR	(49)	181	9	91130
245	16.7	7.1	7.1	chr1	48472503	48472586	(200483836)	+	MIR1_Amn	SINE/MIR	94	177	(53)	93356
213	24.7	16.2	1.1	chr1	48472610	48472703	(200483719)	C	MIRc	SINE/MIR	(129)	139	29	93357
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
2478	9.4	0.0	0.0	chr1	51429644	51429950	(197526472)	C	AluSx1	SINE/Alu	(5)	307	1	98643
2328	17.3	11.8	4.2	chr1	51622406	51622925	(197333497)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	99119
2315	10.7	1.0	0.0	chr1	52330097	52330386	(196626036)	+	AluSp	SINE/Alu	1	293	(20)	100636
2967	10.6	8.1	0.6	chr1	52330387	52330852	(196625570)	C	MER41B	LTR/ERV1	(130)	504	1	100637
264	29.4	10.0	1.6	chr1	52403760	52403887	(196552535)	+	MIRc	SINE/MIR	44	183	(85)	100774
272	29.2	1.4	0.0	chr1	52703541	52703612	(196252810)	C	MIR3	SINE/MIR	(68)	140	68	101511
1692	21.0	2.7	5.2	chr1	53046852	53047387	(195909035)	C	MLT1E1A	LTR/ERVL-MaLR	(1)	679	58	102359
325	28.1	7.3	6.0	chr1	53047415	53047683	(195908739)	C	L1ME4a	LINE/L1	(115)	6009	5737	102360
1703	25.9	6.2	1.9	chr1	53183021	53183516	(195772906)	C	L2a	LINE/L2	(1)	3425	2907	102614
1032	23.1	1.4	2.3	chr1	53183517	53183737	(195772685)	C	MER58A	DNA/hAT-Charlie	(2)	222	4	102615
1703	30.4	9.0	6.7	chr1	53183738	53184796	(195771626)	C	L2a	LINE/L2	(513)	2906	1817	102614
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
27	13.0	5.5	3.9	chr1	54406270	54406342	(194550080)	+	(CCGC)n	Simple_repeat	1	77	(0)	104999
28	3.3	0.0	0.0	chr1	54406358	54406388	(194550034)	+	(CCG)n	Simple_repeat	1	31	(0)	105000
464	30.1	5.7	1.1	chr1	54464053	54464237	(194492185)	C	MIRb	SINE/MIR	(54)	214	21	105139
229	31.6	7.9	1.7	chr1	54464248	54464366	(194492056)	C	MIRc	SINE/MIR	(102)	166	40	105140
2504	12.6	5.2	0.9	chr1	54893126	54893551	(194062871)	C	MER65A	LTR/ERV1	(0)	445	1	106122
256	31.4	9.7	6.0	chr1	54893552	54893580	(194062842)	C	L1ME4a	LINE/L1	(459)	5665	5646	106121
883	13.3	1.5	0.0	chr1	54893598	54893725	(194062697)	+	AluJo	SINE/Alu	2	131	(181)	106123
256	28.0	3.6	1.8	chr1	55258124	55258232	(193698190)	C	LTR85a	LTR/Gypsy?	(0)	702	592	106731
291	20.0	3.1	0.3	chr1	58883997	58884065	(190072357)	+	MIRc	SINE/MIR	82	150	(58)	113732
353	19.9	33.4	5.5	chr1	58884137	58884280	(190072142)	+	MIR	SINE/MIR	61	244	(18)	113733
16	4.5	0.0	0.0	chr1	58896794	58896816	(190059606)	+	(GGGA)n	Simple_repeat	1	23	(0)	113763
1535	12.8	5.5	0.0	chr1	66915201	66915443	(182040979)	C	LTR8	LTR/ERV1	(434)	257	1	127965
2425	11.8	5.8	8.8	chr1	66915444	66915840	(182040582)	+	MER4-int	LTR/ERV1	2737	3151	(3447)	127963
1842	24.1	1.4	5.1	chr1	67060591	67061120	(181895302)	C	MER65B	LTR/ERV1	(21)	510	1	128164
1781	19.3	1.9	0.0	chr1	67061125	67061435	(181894987)	+	MLT1A0	LTR/ERVL-MaLR	48	364	(1)	128163
358	29.5	6.3	13.0	chr1	67701118	67701456	(181254966)	+	L2c	LINE/L2	3072	3386	(1)	129440
601	18.9	14.5	6.9	chr1	67923019	67923337	(181033085)	C	LTR54	LTR/ERV1	(112)	386	1	129820
14094	14.3	2.0	2.9	chr1	67923338	67925906	(181030516)	C	MER57A-int	LTR/ERV1	(392)	5795	3251	129818
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
16	0.0	0.0	0.0	chr1	77779447	77779464	(171176958)	+	(T)n	Simple_repeat	1	18	(0)	143483
558	26.4	11.6	1.5	chr1	84103160	84103405	(164853017)	+	MLT1G	LTR/ERVL-MaLR	1	284	(307)	152069
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
1396	15.3	18.1	2.6	chr1	84382176	84382592	(164573830)	+	LTR54B	LTR/ERV1	1	496	(2)	152435
461	22.4	7.1	6.5	chr1	84573948	84574100	(164382322)	+	MIRb	SINE/MIR	1	154	(114)	152737
13	23.3	2.5	0.0	chr1	84690281	84690320	(164266102)	+	(CGCC)n	Simple_repeat	1	41	(0)	152919
17	10.4	0.0	3.0	chr1	85276551	85276583	(163679839)	+	(CGACG)n	Simple_repeat	1	33	(0)	153916
12	16.3	2.8	2.7	chr1	85276616	85276651	(163679771)	+	(AGGCGC)n	Simple_repeat	1	37	(0)	153917
2921	11.9	14.0	3.6	chr1	85279411	85279958	(163676464)	C	LTR18B	LTR/ERVL	(0)	614	1	153930
327	18.3	6.0	18.4	chr1	85279959	85280010	(163676412)	C	L2	LINE/L2	(702)	2717	2671	153929
40	0.0	0.0	0.0	chr1	85580463	85580496	(163375926)	+	(AC)n	Simple_repeat	1	34	(0)	154403
73	1.5	0.0	0.0	chr1	85580533	85580599	(163375823)	+	(AC)n	Simple_repeat	1	67	(0)	154403
2658	11.1	2.7	0.0	chr1	86461466	86461862	(162494560)	C	MER61E	LTR/ERV1	(161)	408	1	155637
17	9.1	0.0	0.0	chr1	87435498	87435521	(161520901)	+	(CA)n	Simple_repeat	1	24	(0)	157053
291	28.9	11.7	0.6	chr1	87578273	87578439	(161377983)	+	L2a	LINE/L2	3210	3397	(29)	157247
976	27.9	5.8	5.0	chr1	87578451	87578948	(161377474)	C	LTR33	LTR/ERVL	(0)	515	14	157248
1256	29.3	3.5	0.9	chr1	89170235	89170654	(159785768)	+	MER65-int	LTR/ERV1	4440	4870	(1)	159560
560	23.8	3.8	1.9	chr1	89170656	89170809	(159785613)	+	MER65B	LTR/ERV1	1	157	(374)	159560
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
461	22.4	17.1	0.0	chr1	89545902	89546071	(159410351)	+	L1MC5	LINE/L1	9091	9295	(9)	160002
436	29.8	5.0	0.0	chr1	89896310	89896468	(159059954)	C	MIR3	SINE/MIR	(27)	181	18	160507
4527	12.1	0.9	1.7	chr1	91706159	91706797	(157249625)	+	MER41B	LTR/ERV1	1	634	(0)	163127
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
257	29.8	5.3	4.6	chr1	93754413	93754542	(155201880)	C	MIRc	SINE/MIR	(9)	259	129	166794
7360	12.1	4.0	1.3	chr1	93754556	93755726	(155200696)	+	Tigger3b	DNA/TcMar-Tigger	27	1230	(1)	166795
4550	7.0	0.0	0.0	chr1	94612981	94613534	(154342888)	+	MER41A	LTR/ERV1	1	554	(0)	168027
4146	13.2	1.7	0.0	chr1	99535385	99536007	(149420415)	C	MER41B	LTR/ERV1	(0)	634	1	174965
256	20.5	4.7	0.0	chr1	99536008	99536072	(149420350)	+	MIR	SINE/MIR	34	110	(120)	174964
2307	7.0	4.4	0.0	chr1	99536113	99536396	(149420026)	C	AluY	SINE/Alu	(14)	297	1	174966
2118	12.8	0.3	0.0	chr1	99768821	99769116	(149187306)	+	AluSg	SINE/Alu	6	302	(8)	175327
12	12.6	3.7	0.0	chr1	107056667	107056693	(141899729)	+	(CCGCG)n	Simple_repeat	1	28	(0)	184892
445	23.2	1.9	1.5	chr1	108963593	108963725	(139992697)	C	Charlie15b	DNA/hAT-Charlie	(16)	1045	926	187650
260	26.7	6.5	14.8	chr1	109283698	109283899	(139672523)	+	MIRb	SINE/MIR	5	188	(80)	188334
1174	22.9	11.9	4.8	chr1	109290937	109291372	(139665050)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	79	188351
808	23.0	2.7	2.2	chr1	109719410	109719591	(139236831)	C	MER58A	DNA/hAT-Charlie	(0)	224	42	188995
4119	17.7	4.0	1.0	chr1	109719594	109720461	(139235961)	+	L1MB3	LINE/L1	5289	6183	(0)	188996
310	33.0	0.0	0.0	chr1	109773441	109773549	(139182873)	C	L3	LINE/CR1	(133)	3966	3858	189057
272	23.0	3.2	1.4	chr1	109773645	109773727	(139182695)	+	MIRc	SINE/MIR	95	181	(49)	189058
227	34.6	0.0	2.4	chr1	109826876	109826958	(139129464)	C	LTR85c	LTR/Gypsy?	(648)	175	95	189147
397	28.6	0.0	1.6	chr1	109826897	109827017	(139129405)	C	LTR104_Mam	LTR/Gypsy	(1323)	186	68	189148
5518	8.7	4.8	0.3	chr1	109852233	109852977	(139103445)	C	LTR17	LTR/ERV1	(0)	780	1	189185
295	29.7	12.9	2.2	chr1	109979553	109979779	(138976643)	C	MIRc	SINE/MIR	(13)	255	1	189386
262	32.6	3.2	3.9	chr1	109980014	109980268	(138976154)	+	L1ME4c	LINE/L1	478	730	(100)	189387
4051	10.7	0.2	0.0	chr1	110031079	110031631	(138924791)	C	MER41A	LTR/ERV1	(0)	554	1	189448
181	17.6	0.0	0.0	chr1	110031638	110031671	(138924751)	C	MIRc	SINE/MIR	(106)	162	129	189449
16	27.0	0.0	5.8	chr1	110034688	110034756	(138921666)	+	(GCC)n	Simple_repeat	1	69	(0)	189456
779	17.8	0.0	0.0	chr1	110879750	110879867	(138076555)	C	AluJo	SINE/Alu	(194)	118	1	190854
320	29.1	13.2	7.4	chr1	110880717	110881013	(138075409)	C	L2c	LINE/L2	(44)	3343	3027	190856
8430	23.4	6.8	2.3	chr1	110881214	110885268	(138071154)	C	L1ME1	LINE/L1	(131)	6221	1908	190857
571	36.5	5.7	2.5	chr1	111162011	111162485	(137793937)	C	L2	LINE/L2	(404)	3015	2525	191188
304	29.3	9.7	2.8	chr1	112544636	112544779	(136411643)	C	MIRc	SINE/MIR	(2)	266	112	193281
8741	5.1	0.7	0.0	chr1	112816778	112817803	(136138619)	C	LTR5A	LTR/ERVK	(0)	1033	1	193834
265	24.6	2.8	1.4	chr1	112819058	112819127	(136137295)	C	MIRc	SINE/MIR	(32)	236	166	193837
341	22.8	3.0	6.6	chr1	112819286	112819421	(136137001)	+	Tigger19a	DNA/TcMar-Tigger	106	236	(87)	193838
2222	15.0	8.0	2.8	chr1	112902167	112902510	(136053912)	C	LTR54B	LTR/ERV1	(134)	364	1	194017
1425	22.2	2.5	8.3	chr1	112902511	112902700	(136053722)	+	MER21C	LTR/ERVL	495	747	(191)	194019
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
808	23.2	4.5	0.9	chr1	113141977	113142193	(135814229)	+	MIR	SINE/MIR	28	252	(10)	194559
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
2251	11.8	0.0	1.9	chr1	114379670	114379983	(134576439)	+	AluSq2	SINE/Alu	1	308	(5)	196478
1186	17.8	21.8	11.7	chr1	114379984	114380421	(134576001)	+	LTR36	LTR/ERV1	123	611	(0)	196475
4672	11.4	0.8	1.4	chr1	115874235	115874735	(133081687)	C	MER41B	LTR/ERV1	(130)	504	1	198829
1028	19.4	3.2	3.6	chr1	115874736	115874878	(133081544)	+	MER20	DNA/hAT-Charlie	76	219	(0)	198828
1254	19.3	10.3	0.0	chr1	116680089	116680332	(132276090)	+	AluJo	SINE/Alu	1	272	(40)	200096
251	26.2	13.3	1.5	chr1	116680333	116680398	(132276024)	+	MIRc	SINE/MIR	122	198	(32)	200097
198	32.4	7.8	1.4	chr1	116680384	116680507	(132275915)	+	MIRb	SINE/MIR	142	266	(2)	200097
3097	26.4	6.1	15.4	chr1	116680493	116681624	(132274798)	C	L2a	LINE/L2	(23)	3403	2349	200098
12	22.4	0.0	2.6	chr1	116826141	116826178	(132130244)	+	G-rich	Low_complexity	1	38	(0)	200328
381	30.4	9.2	9.7	chr1	116826982	116827426	(132128996)	C	LTR104_Mam	LTR/Gypsy	(370)	1139	697	200329
380	34.9	1.2	0.0	chr1	116827429	116827594	(132128828)	+	L2	LINE/L2	800	967	(2452)	200330
3419	22.0	9.3	0.1	chr1	117643855	117644701	(131311721)	C	L1MEc	LINE/L1	(5433)	967	35	201603
29	20.3	0.0	0.0	chr1	117655466	117655519	(131300903)	+	(AC)n	Simple_repeat	1	54	(0)	201620
2310	10.4	4.2	0.0	chr1	117821693	117822010	(131134412)	C	LTR18C	LTR/ERVL	(13)	332	1	201836
438	32.6	0.0	4.3	chr1	117822012	117822152	(131134270)	+	MER5A	DNA/hAT-Charlie	55	189	(0)	201837
279	25.9	11.2	8.7	chr1	117822168	117822340	(131134082)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	201838
49	0.0	0.0	0.0	chr1	119646323	119646364	(129310058)	+	(AC)n	Simple_repeat	1	42	(0)	204333
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
4865	9.3	1.4	0.8	chr1	121080112	121080741	(127875681)	C	MER41B	LTR/ERV1	(0)	634	1	206516
1180	14.8	12.8	2.2	chr1	121080742	121080774	(127875648)	C	L1MEc	LINE/L1	(5110)	1290	1260	206514
5181	10.1	2.9	0.1	chr1	121080775	121081476	(127874946)	C	LTR30	LTR/ERV1	(0)	722	1	206517
299	29.6	4.3	4.3	chr1	143721075	143721212	(105235210)	C	Charlie4a	DNA/hAT-Charlie	(8)	500	363	208225
300	32.8	1.6	1.6	chr1	144412020	144412143	(104544279)	+	Charlie4a	DNA/hAT-Charlie	381	504	(4)	209360
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
631	21.4	3.6	3.0	chr1	144523858	144524021	(104432401)	C	U1	snRNA	(0)	165	1	209540
309	32.8	1.6	1.6	chr1	145280554	145280677	(103675745)	+	Charlie4a	DNA/hAT-Charlie	381	504	(4)	210762
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1188	16.7	3.4	15.8	chr1	145991760	145992094	(102964328)	+	AluJo	SINE/Alu	2	293	(19)	211891
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
425	20.4	15.0	5.2	chr1	147671802	147671885	(101284537)	+	MLT1B	LTR/ERVL-MaLR	1	107	(283)	214459
4104	12.2	2.0	2.2	chr1	147671886	147672520	(101283902)	+	MER41B	LTR/ERV1	1	634	(0)	214460
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
267	27.6	1.3	0.0	chr1	148263083	148263158	(100693264)	+	Charlie4a	DNA/hAT-Charlie	381	457	(51)	215388
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
303	32.8	1.6	1.6	chr1	148522036	148522159	(100434263)	+	Charlie4a	DNA/hAT-Charlie	381	504	(4)	215836
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
20	23.9	0.0	0.0	chr1	150163397	150163441	(98792981)	+	(AC)n	Simple_repeat	1	45	(0)	218432
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
225	22.1	2.5	17.2	chr1	150634830	150634922	(98321500)	+	SVA_E	Retroposon/SVA	853	931	(451)	219503
6775	10.1	1.6	0.9	chr1	150634924	150635885	(98320537)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	219504
8294	6.5	0.9	0.0	chr1	150709190	150710213	(98246209)	+	LTR5A	LTR/ERVK	1	1033	(0)	219662
2451	6.4	0.3	0.0	chr1	150876981	150877276	(98079146)	+	AluSq	SINE/Alu	1	297	(16)	220010
1149	28.3	5.2	1.2	chr1	150998970	150999302	(97957120)	+	MLT1I	LTR/ERVL-MaLR	60	406	(5)	220281
211	27.4	11.0	0.9	chr1	152071342	152071455	(96884967)	+	MIRb	SINE/MIR	4	130	(138)	222354
4089	9.7	2.2	0.2	chr1	153343705	153344272	(95612150)	+	LTR19B	LTR/ERV1	1	580	(0)	223933
295	11.8	0.0	0.0	chr1	153422594	153422644	(95533778)	C	Alu	SINE/Alu	(10)	291	241	224042
356	37.2	2.0	0.0	chr1	153433113	153433354	(95523068)	+	HERV16-int	LTR/ERVL	1332	1578	(4089)	224064
1866	21.9	8.5	0.5	chr1	153433357	153433947	(95522475)	+	MER77B	LTR/ERVL	1	681	(19)	224065
668	1.4	0.0	0.0	chr1	153671250	153671323	(95285099)	+	tRNA-Met-i	tRNA	1	74	(1)	224506
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
19	25.9	0.0	4.5	chr1	153958837	153958903	(94997519)	+	GA-rich	Low_complexity	1	67	(0)	225135
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
14	29.9	1.4	2.9	chr1	154321352	154321420	(94635002)	+	(CCTCT)n	Simple_repeat	1	70	(0)	225929
267	30.2	3.6	0.2	chr1	154861811	154861933	(94094489)	C	MIR3	SINE/MIR	(39)	191	65	226915
20	22.8	1.8	0.0	chr1	155208685	155208740	(93747682)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	227541
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
12	24.4	0.0	4.3	chr1	155273439	155273485	(93682937)	+	(CCGGCT)n	Simple_repeat	1	47	(0)	227647
1810	10.8	0.4	0.0	chr1	155306973	155307212	(93649210)	C	AluSx3	SINE/Alu	(70)	241	1	227711
456	11.5	3.3	4.4	chr1	155307213	155307272	(93649150)	+	MER51B	LTR/ERV1	318	377	(0)	227710
432	10.3	0.0	0.0	chr1	155307273	155307340	(93649082)	C	L1MB3	LINE/L1	(250)	5933	5866	227712
2126	11.9	4.9	0.3	chr1	155307341	155307693	(93648729)	+	MER41A	LTR/ERV1	1	370	(184)	227713
3588	12.3	2.6	2.0	chr1	155691833	155692373	(93264049)	C	LTR14	LTR/ERVK	(4)	544	1	228566
21938	18.5	6.2	5.6	chr1	155692376	155693679	(93262743)	C	HERVKC4-int	LTR/ERVK	(6)	5256	3950	228566
2296	8.2	1.0	0.0	chr1	155857448	155857739	(93098683)	+	AluSx	SINE/Alu	1	295	(17)	228965
19	14.4	0.0	0.0	chr1	156106429	156106459	(92849963)	+	(CA)n	Simple_repeat	1	31	(0)	229496
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
42	0.0	0.0	0.0	chr1	156661556	156661591	(92294831)	+	(GT)n	Simple_repeat	1	36	(0)	230533
184	26.5	9.4	2.5	chr1	156755592	156755689	(92200733)	+	MIR3	SINE/MIR	54	158	(110)	230683
456	30.0	13.0	3.9	chr1	156755796	156755967	(92200455)	+	MIR	SINE/MIR	10	206	(56)	230684
2771	12.7	1.4	5.8	chr1	157279384	157279886	(91676536)	C	LTR21A	LTR/ERV1	(0)	481	1	231522
279	32.7	2.6	7.4	chr1	157311738	157311899	(91644523)	C	MIRb	SINE/MIR	(110)	158	5	231558
1583	18.3	7.0	1.2	chr1	157366792	157367112	(91589310)	C	MER61A	LTR/ERV1	(0)	341	1	231610
652	25.1	1.6	0.5	chr1	157367113	157367293	(91589129)	+	L1ME2	LINE/L1	5846	6029	(150)	231608
3631	7.2	4.7	0.2	chr1	158819867	158820354	(90136068)	C	MER9a3	LTR/ERVK	(1)	511	1	233588
364	27.6	7.5	4.8	chr1	159077080	159077518	(89878904)	C	MER41E	LTR/ERV1	(0)	572	177	233860
427	30.9	7.5	3.1	chr1	160099440	160099671	(88856751)	+	MIRb	SINE/MIR	5	268	(0)	235226
449	31.9	7.1	1.1	chr1	160651940	160652123	(88304299)	C	MIRb	SINE/MIR	(65)	203	8	236078
6789	10.8	0.8	1.0	chr1	160652139	160653095	(88303327)	+	LTR5_Hs	LTR/ERVK	1	955	(13)	236079
2485	8.4	0.0	0.0	chr1	160989613	160989920	(87966502)	C	AluSg	SINE/Alu	(1)	309	2	236638
271	10.5	0.0	0.0	chr1	160989981	160990018	(87966404)	C	L1MC4a	LINE/L1	(2397)	5485	5448	236635
2426	8.2	0.0	1.0	chr1	160990101	160990406	(87966016)	+	AluSq2	SINE/Alu	1	303	(10)	236639
12	19.7	0.0	0.0	chr1	161013778	161013806	(87942616)	+	(TCCC)n	Simple_repeat	1	29	(0)	236696
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
230	30.1	3.5	0.0	chr1	161390599	161390681	(87565741)	C	L1ME4b	LINE/L1	(74)	818	733	237442
19	12.4	0.0	0.0	chr1	161399246	161399280	(87557142)	+	(GCCGGA)n	Simple_repeat	1	35	(0)	237469
681	0.0	0.0	0.0	chr1	161428077	161428150	(87528272)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	237526
15	9.9	0.0	7.9	chr1	161722286	161722323	(87234099)	+	G-rich	Low_complexity	1	38	(0)	237988
2440	6.2	0.0	1.3	chr1	161764874	161765180	(87191242)	C	AluSx3	SINE/Alu	(8)	303	1	238071
16	26.9	0.0	0.0	chr1	162561485	162561533	(86394889)	+	(CCGCGT)n	Simple_repeat	1	49	(0)	239383
13	19.8	0.0	2.7	chr1	162561644	162561680	(86394742)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	239384
890	27.8	8.9	4.0	chr1	166489343	166489960	(82466462)	C	L2a	LINE/L2	(1)	3425	2762	245349
4022	8.0	0.9	3.4	chr1	166692851	166693418	(82263004)	C	MER41A	LTR/ERV1	(0)	554	1	245613
517	29.7	1.5	0.0	chr1	167628713	167628840	(81327582)	C	MIRb	SINE/MIR	(119)	149	20	247024
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
556	23.9	12.6	2.6	chr1	167757399	167757626	(81198796)	C	L1ME3D	LINE/L1	(0)	6242	5989	247262
2146	12.5	5.8	1.1	chr1	167861740	167862102	(81094320)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	247449
2598	20.4	6.8	3.3	chr1	167909674	167909827	(81046595)	C	L1ME3A	LINE/L1	(579)	5594	5444	247521
318	26.6	7.1	7.1	chr1	167909828	167909997	(81046425)	+	LTR2C	LTR/ERV1	6	175	(288)	247523
1120	14.0	0.5	1.1	chr1	167909998	167910185	(81046237)	+	LTR2C	LTR/ERV1	315	501	(0)	247523
413	19.8	1.1	6.2	chr1	167924722	167924818	(81031604)	+	Tigger2b_Pri	DNA/TcMar-Tigger	1	92	(976)	247548
1949	16.9	5.5	1.4	chr1	167984837	167985184	(80971238)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	247637
54	0.0	3.8	0.0	chr1	167985185	167985237	(80971185)	+	(GT)n	Simple_repeat	1	55	(0)	247638
2046	21.0	5.9	4.4	chr1	167985253	167985705	(80970717)	C	MLT1D	LTR/ERVL-MaLR	(45)	460	1	247639
538	31.6	8.5	8.1	chr1	168287189	168287468	(80668954)	+	L2a	LINE/L2	2956	3257	(169)	248122
838	16.1	2.3	0.0	chr1	168287469	168287598	(80668824)	C	AluJr	SINE/Alu	(179)	133	1	248123
538	31.6	8.5	8.1	chr1	168287599	168287786	(80668636)	+	L2a	LINE/L2	3258	3426	(0)	248122
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
41	0.0	0.0	0.0	chr1	172643804	172643838	(76312584)	+	(CA)n	Simple_repeat	1	35	(0)	254498
266	31.6	6.3	5.3	chr1	173302216	173302402	(75654020)	C	MIRc	SINE/MIR	(18)	250	62	255407
373	30.4	2.3	4.7	chr1	173302478	173302633	(75653789)	C	MIRb	SINE/MIR	(44)	164	17	255408
2579	8.3	0.0	0.0	chr1	173330872	173331184	(75625238)	C	AluSq2	SINE/Alu	(0)	313	1	255443
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
1053	24.4	8.8	5.9	chr1	175410539	175410925	(73545497)	+	MLT1I	LTR/ERVL-MaLR	1	399	(12)	258635
641	17.3	3.5	7.3	chr1	176220130	176220279	(72736143)	C	AluJb	SINE/Alu	(1)	311	168	259908
3251	13.3	1.4	0.6	chr1	176220287	176220801	(72735621)	+	MER41B	LTR/ERV1	3	521	(113)	259909
273	34.8	2.1	0.0	chr1	176880810	176880901	(72075521)	+	MIRb	SINE/MIR	83	176	(92)	260844
220	37.8	1.6	3.0	chr1	176880948	176881078	(72075344)	C	MIR3	SINE/MIR	(60)	148	20	260845
200	25.2	12.5	5.2	chr1	179047351	179047505	(69908917)	+	L2	LINE/L2	2831	2998	(421)	264051
3934	7.6	5.0	0.2	chr1	179363083	179363609	(69592813)	C	MER41A	LTR/ERV1	(0)	554	1	264713
205	27.4	1.9	0.0	chr1	179808180	179808230	(69148192)	+	MIRc	SINE/MIR	60	111	(157)	265344
210	32.5	1.2	1.2	chr1	179808259	179808280	(69148142)	+	MIRc	SINE/MIR	179	200	(68)	265344
1410	22.1	13.8	5.3	chr1	179808281	179808790	(69147632)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	265345
1175	25.8	7.4	3.2	chr1	180117103	180117539	(68838883)	C	MER70C	LTR/ERVL	(74)	457	1	265899
3652	14.9	8.6	0.6	chr1	180563374	180564027	(68392395)	C	MER50	LTR/ERV1	(23)	711	1	266577
475	18.4	7.3	4.2	chr1	180970633	180970776	(67985646)	C	MER44A	DNA/TcMar-Tigger	(24)	315	190	267237
306	11.4	0.0	0.0	chr1	180970774	180970817	(67985605)	C	MER44A	DNA/TcMar-Tigger	(295)	44	1	267237
259	30.1	8.9	4.3	chr1	181033063	181033270	(67923152)	C	MIRc	SINE/MIR	(48)	220	3	267338
189	24.6	4.2	8.0	chr1	181141525	181141599	(67814823)	C	L2b	LINE/L2	(20)	3355	3284	267540
3896	12.8	4.1	0.7	chr1	181173937	181174423	(67781999)	+	MER41B	LTR/ERV1	1	509	(125)	267598
609	31.4	5.1	5.5	chr1	182259536	182259828	(66696594)	C	UCON26	Unknown	(1)	342	51	269119
2120	11.9	2.9	0.0	chr1	182338700	182339001	(66617421)	C	AluSx1	SINE/Alu	(1)	311	1	269294
262	32.7	1.7	1.7	chr1	182339093	182339207	(66617215)	+	L2a	LINE/L2	3263	3377	(49)	269295
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
19	19.6	1.4	6.8	chr1	182391987	182392059	(66564363)	+	G-rich	Low_complexity	1	74	(0)	269391
765	29.2	11.1	4.8	chr1	182600698	182601435	(66354987)	+	L2a	LINE/L2	2599	3418	(8)	269728
11	19.1	2.1	6.2	chr1	182615102	182615148	(66341274)	+	(CGGCCG)n	Simple_repeat	1	48	(0)	269753
21	22.2	1.3	5.3	chr1	185317244	185317318	(63639104)	+	(GCC)n	Simple_repeat	1	76	(0)	274052
885	25.8	16.8	4.9	chr1	186082218	186082650	(62873772)	C	MLT1H	LTR/ERVL-MaLR	(13)	476	1	275140
13	14.3	4.8	4.5	chr1	186680276	186680317	(62276105)	+	(GGCGC)n	Simple_repeat	1	44	(0)	275944
38	0.0	0.0	2.7	chr1	186828696	186828732	(62127690)	+	(CA)n	Simple_repeat	1	37	(0)	276162
427	27.5	15.5	0.4	chr1	192476813	192477042	(56479380)	+	LTR67B	LTR/ERVL	1	271	(349)	283443
374	32.6	4.9	0.0	chr1	192477113	192477287	(56479135)	+	LTR67B	LTR/ERVL	437	620	(0)	283443
6214	29.0	8.4	3.7	chr1	192985411	192986727	(55969695)	C	L2a	LINE/L2	(1)	3425	2095	284178
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
2137	23.4	2.0	6.8	chr1	195715329	195715897	(53240525)	C	MER87	LTR/ERV1	(0)	541	1	287754
1571	15.3	7.5	0.0	chr1	197939182	197939442	(51016980)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	67	290541
3319	9.3	0.2	4.6	chr1	197939443	197939843	(51016579)	C	L1PA13	LINE/L1	(2)	6161	5781	290542
1447	23.5	8.8	9.3	chr1	198079256	198079956	(50876466)	C	MER61E	LTR/ERV1	(0)	779	14	290741
509	34.9	10.4	1.4	chr1	200162096	200162383	(48794039)	C	L2b	LINE/L2	(0)	3375	3059	293725
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
1227	5.1	0.0	0.0	chr1	200886489	200886626	(48069796)	C	AluSx	SINE/Alu	(174)	138	1	295163
2551	13.1	11.8	0.7	chr1	200886694	200887146	(48069276)	+	LTR54	LTR/ERV1	1	510	(0)	295164
204	25.8	15.1	3.1	chr1	201171603	201171730	(47784692)	+	MIRc	SINE/MIR	58	203	(65)	295612
13	16.5	0.0	0.0	chr1	201829212	201829238	(47127184)	+	(GGC)n	Simple_repeat	1	27	(0)	296704
442	21.8	12.0	2.6	chr1	201882712	201882862	(47073560)	+	MIRb	SINE/MIR	50	216	(52)	296783
555	26.2	12.9	1.3	chr1	201883573	201883804	(47072618)	+	MamGypLTR1b	LTR/Gypsy	511	773	(9)	296784
276	29.1	4.7	0.0	chr1	201884009	201884119	(47072303)	C	MIRc	SINE/MIR	(125)	143	22	296785
940	24.7	4.8	1.2	chr1	201884098	201884339	(47072083)	+	MIR	SINE/MIR	12	262	(0)	296786
2470	8.1	0.0	0.3	chr1	201954809	201955118	(47001304)	+	AluSx3	SINE/Alu	1	309	(2)	296923
46	21.2	3.1	4.8	chr1	201955119	201955207	(47001215)	+	A-rich	Low_complexity	71	157	(0)	296924
688	28.7	15.4	2.2	chr1	202076594	202076991	(46879431)	C	L2a	LINE/L2	(0)	3426	2963	297210
2307	12.3	0.3	0.0	chr1	202077113	202077420	(46879002)	+	AluSc	SINE/Alu	1	309	(0)	297211
291	26.4	1.9	10.2	chr1	202106180	202106297	(46850125)	+	MIR3	SINE/MIR	73	180	(28)	297299
486	29.6	12.9	3.0	chr1	202342194	202342423	(46613999)	+	L3	LINE/CR1	3664	3919	(180)	297723
4533	9.8	1.9	0.2	chr1	202531853	202532475	(46423947)	C	MER41B	LTR/ERV1	(0)	634	1	298069
12	28.1	1.9	1.9	chr1	202808521	202808573	(46147849)	+	(CCCGC)n	Simple_repeat	1	54	(0)	298520
207	18.6	2.3	0.0	chr1	203287568	203287610	(45668812)	+	L3b	LINE/CR1	4940	4983	(249)	299354
2319	18.6	5.6	4.2	chr1	203599930	203600455	(45355967)	C	MER41A	LTR/ERV1	(20)	534	1	299917
2360	8.2	1.0	0.0	chr1	203758455	203758748	(45197674)	+	AluSp	SINE/Alu	1	297	(16)	300244
898	10.9	0.8	4.4	chr1	203758778	203758825	(45197597)	+	AluJo	SINE/Alu	5	53	(259)	300245
3879	9.5	3.4	2.9	chr1	203758826	203759300	(45197122)	+	MER41A	LTR/ERV1	1	494	(60)	300246
2940	17.9	3.9	0.6	chr1	204172039	204172561	(44783861)	+	MER87	LTR/ERV1	1	541	(0)	301120
780	31.1	13.2	12.4	chr1	204177053	204177515	(44778907)	C	L2b	LINE/L2	(2271)	1148	664	301124
12	7.2	10.3	0.0	chr1	204466140	204466168	(44490254)	+	G-rich	Low_complexity	1	32	(0)	301575
262	25.6	2.5	7.1	chr1	204672365	204672448	(44283974)	+	Charlie17a	DNA/hAT-Charlie	2	81	(136)	302047
12	20.4	0.0	0.0	chr1	204672677	204672705	(44283717)	+	(CTCC)n	Simple_repeat	1	29	(0)	302048
353	27.3	8.6	0.0	chr1	204711350	204711477	(44244945)	+	MIR3	SINE/MIR	62	201	(7)	302112
327	28.2	12.1	0.8	chr1	204711488	204711612	(44244810)	+	MIRb	SINE/MIR	125	265	(3)	302113
1959	11.3	5.7	1.4	chr1	205157494	205157777	(43798645)	+	AluSx1	SINE/Alu	2	298	(14)	302898
2428	5.7	0.3	2.3	chr1	206104889	206105189	(42851233)	+	AluY	SINE/Alu	1	295	(16)	304590
449	25.5	0.0	1.8	chr1	206575684	206575795	(42380627)	C	MIR3	SINE/MIR	(14)	194	85	305329
1999	16.3	0.7	0.3	chr1	206713585	206713891	(42242531)	+	AluSz	SINE/Alu	1	308	(4)	305569
229	25.3	12.1	5.8	chr1	206713968	206714122	(42242300)	C	L2c	LINE/L2	(812)	2607	2442	305568
454	35.8	5.5	3.4	chr1	206714123	206714388	(42242034)	C	L3	LINE/CR1	(991)	3108	2837	305558
1597	17.9	13.3	3.4	chr1	206735427	206735871	(42220551)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	8	305601
3374	12.3	3.3	1.5	chr1	206816960	206817488	(42138934)	+	LTR45C	LTR/ERV1	1	539	(0)	305743
443	29.7	6.5	2.9	chr1	206890530	206890727	(42065695)	C	L2c	LINE/L2	(0)	3387	3147	305871
2460	16.8	13.3	5.5	chr1	206890821	206891325	(42065097)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	305872
451	34.9	2.5	2.0	chr1	207203618	207203813	(41752609)	C	LTR16C	LTR/ERVL	(292)	197	1	306343
280	16.7	0.0	0.0	chr1	207312022	207312069	(41644353)	+	LTR8	LTR/ERV1	1	48	(772)	306468
2885	21.2	2.8	4.9	chr1	207312071	207312761	(41643661)	+	LTR8	LTR/ERV1	16	691	(0)	306468
2582	11.6	2.3	0.3	chr1	207519632	207520019	(41436403)	C	MER57B1	LTR/ERV1	(4)	397	2	306769
2166	16.7	1.4	4.7	chr1	207520092	207520538	(41435884)	+	MER54A	LTR/ERVL	3	434	(467)	306770
4699	13.5	11.5	0.3	chr1	207625489	207626216	(41330206)	C	LTR8B	LTR/ERV1	(0)	820	1	306928
268	27.8	4.3	7.6	chr1	207626217	207626227	(41330195)	C	X7B_LINE	LINE/CR1	(130)	120	112	306927
7708	8.5	0.7	0.2	chr1	207635112	207636074	(41320348)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	306944
259	13.5	7.5	17.8	chr1	207636075	207636164	(41320258)	C	SVA_F	Retroposon/SVA	(450)	925	846	306945
17	14.2	7.7	0.0	chr1	207808184	207808222	(41148200)	+	GA-rich	Low_complexity	1	42	(0)	307156
15	15.3	5.4	0.0	chr1	207818484	207818520	(41137902)	+	GA-rich	Low_complexity	1	39	(0)	307166
1324	15.8	8.1	0.4	chr1	207826211	207826439	(41129983)	C	LTR9B	LTR/ERV1	(0)	644	397	307174
2409	17.0	5.0	2.6	chr1	207935101	207935552	(41020870)	+	LTR2	LTR/ERV1	1	463	(0)	307352
341	34.8	3.5	3.6	chr1	209646353	209646540	(39309882)	C	MIR3	SINE/MIR	(20)	188	3	309984
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
2005	12.0	0.0	4.5	chr1	211344748	211344920	(37611502)	C	AluJb	SINE/Alu	(13)	299	138	312537
1518	15.9	1.4	8.4	chr1	211525085	211525293	(37431129)	+	AluJo	SINE/Alu	3	193	(119)	312864
3967	12.9	2.4	0.2	chr1	211525294	211525800	(37430622)	+	MER41B	LTR/ERV1	2	513	(121)	312865
17	25.8	3.9	2.5	chr1	211579416	211579494	(37376928)	+	(GGCGCGG)n	Simple_repeat	1	80	(0)	312977
13	17.7	5.3	0.0	chr1	211613345	211613382	(37343040)	+	(TGAGAG)n	Simple_repeat	1	40	(0)	313045
248	30.9	2.2	9.8	chr1	211735752	211735945	(37220477)	C	MIRc	SINE/MIR	(7)	261	83	313285
214	25.7	0.0	5.1	chr1	212238942	212239019	(36717403)	C	L2a	LINE/L2	(69)	3318	3245	314183
11502	19.6	5.0	3.1	chr1	212430395	212431096	(36525326)	+	PRIMA41-int	LTR/ERV1	7041	7752	(4)	314480
553	24.6	5.8	0.0	chr1	212431101	212431230	(36525192)	+	MER41D	LTR/ERV1	1	138	(383)	314480
1793	17.5	11.1	3.1	chr1	212478011	212478420	(36478002)	C	LTR54B	LTR/ERV1	(44)	454	2	314582
407	27.8	3.1	2.3	chr1	212478475	212478603	(36477819)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	433	314585
515	33.8	6.9	4.6	chr1	219038099	219038464	(29917958)	C	L2a	LINE/L2	(1)	3425	3011	324086
2174	14.9	14.0	0.0	chr1	219038547	219038981	(29917441)	+	LTR54	LTR/ERV1	1	506	(4)	324087
17847	16.2	5.1	1.4	chr1	219088451	219094763	(29861659)	+	L1MA4	LINE/L1	11	7719	(0)	324154
23	15.5	2.2	0.0	chr1	220300500	220300544	(28655878)	+	(AGC)n	Simple_repeat	1	46	(0)	326003
452	27.8	9.7	6.3	chr1	221182937	221183205	(27773217)	C	MLT2F	LTR/ERVL	(380)	283	5	327277
527	32.6	3.9	1.1	chr1	221183264	221183735	(27772687)	C	L1ME3Cz	LINE/L1	(615)	382	3	327279
498	12.7	0.0	0.0	chr1	221316978	221317056	(27639366)	+	MLT2B3	LTR/ERVL	1	79	(475)	327488
13123	17.0	3.6	1.0	chr1	221317057	221319315	(27637107)	+	ERVL-B4-int	LTR/ERVL	3394	5714	(0)	327489
653	24.2	3.3	12.5	chr1	221961352	221961703	(26994719)	C	MER57A-int	LTR/ERV1	(5396)	791	467	328433
600	26.5	0.7	2.0	chr1	221961747	221961896	(26994526)	C	LTR49-int	LTR/ERV1	(4078)	2253	2106	328436
900	25.3	3.5	6.5	chr1	221961897	221962158	(26994264)	C	LTR49-int	LTR/ERV1	(4178)	2153	1900	328436
2406	18.4	4.9	6.0	chr1	221962160	221962675	(26993747)	C	LTR54	LTR/ERV1	(0)	510	1	328437
211	40.0	2.8	0.9	chr1	222906192	222906297	(26050125)	+	MamSINE1	SINE/tRNA-RTE	115	222	(68)	329880
3930	8.7	0.4	1.8	chr1	222906370	222906919	(26049503)	+	MER41A	LTR/ERV1	4	545	(9)	329881
1237	22.0	13.7	9.5	chr1	223313004	223313541	(25642881)	+	MER77B	LTR/ERVL	38	601	(99)	330512
4439	10.3	1.1	0.8	chr1	223313550	223314163	(25642259)	+	MER41B	LTR/ERV1	1	616	(18)	330513
3965	7.5	1.1	3.5	chr1	223732186	223732753	(25223669)	C	MER41A	LTR/ERV1	(0)	554	1	331128
2722	16.7	2.9	5.4	chr1	223732754	223733021	(25223401)	C	LTR75_1	LTR/ERV1	(264)	282	4	331127
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
36	25.6	4.1	2.6	chr1	224434585	224434730	(24521692)	+	(CGG)n	Simple_repeat	1	152	(0)	332551
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
3378	8.8	10.9	3.0	chr1	224930391	224930605	(24025817)	+	Tigger3b	DNA/TcMar-Tigger	41	291	(940)	333382
2513	5.5	0.0	0.3	chr1	224930606	224930897	(24025525)	C	AluY	SINE/Alu	(20)	291	1	333383
4438	6.0	1.1	2.5	chr1	225466588	225467028	(23489394)	C	MER41A	LTR/ERV1	(116)	438	1	334015
200	30.8	10.1	3.6	chr1	225777463	225777600	(23178822)	+	L2c	LINE/L2	3231	3378	(9)	334567
11	7.4	10.3	0.0	chr1	225928519	225928547	(23027875)	+	(CTGCTT)n	Simple_repeat	1	32	(0)	334828
1298	23.1	8.8	4.4	chr1	226034410	226034863	(22921559)	+	MLT1E1A	LTR/ERVL-MaLR	107	678	(2)	335063
20	17.0	0.0	6.7	chr1	226870544	226870603	(22085819)	+	G-rich	Low_complexity	1	60	(0)	336618
2224	18.6	3.2	2.1	chr1	227564047	227564512	(21391910)	C	MER57E3	LTR/ERV1	(16)	471	1	337651
3430	23.5	4.6	8.6	chr1	227848216	227849417	(21107005)	C	L1MCb	LINE/L1	(5507)	1244	1	337971
22	22.6	2.4	4.7	chr1	228082878	228082977	(20873445)	+	G-rich	Low_complexity	1	97	(0)	338274
4222	14.2	0.8	0.0	chr1	228417414	228418041	(20538381)	C	MER41B	LTR/ERV1	(0)	634	2	338677
294	32.8	4.7	0.0	chr1	228418094	228418215	(20538207)	C	MER34	LTR/ERV1	(317)	225	98	338678
20	4.3	0.0	0.0	chr1	228479101	228479124	(20477298)	+	(T)n	Simple_repeat	1	24	(0)	338778
1394	20.8	10.3	8.5	chr1	228491021	228491105	(20465317)	C	MER34	LTR/ERV1	(0)	542	458	338802
188	28.1	5.0	1.7	chr1	229148067	229148124	(19808298)	+	L2c	LINE/L2	3276	3335	(52)	339757
935	19.5	12.5	0.0	chr1	229514828	229515048	(19441374)	C	MER58B	DNA/hAT-Charlie	(53)	288	36	340409
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
4058	13.4	2.0	1.0	chr1	230138555	230139059	(18817363)	C	MER41B	LTR/ERV1	(122)	512	2	341466
4518	7.1	0.7	0.0	chr1	230151683	230152232	(18804190)	C	MER41A	LTR/ERV1	(0)	554	1	341476
340	27.0	7.4	11.2	chr1	230152376	230152642	(18803780)	+	MER112	DNA/hAT-Charlie	5	260	(1)	341477
4156	9.5	2.5	3.6	chr1	230623954	230624566	(18331856)	+	LTR9	LTR/ERV1	1	606	(6)	342160
7640	13.2	1.8	2.1	chr1	231049496	231049968	(17906454)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	768	342827
3607	16.9	5.4	3.8	chr1	231072018	231072732	(17883690)	C	LTR8A	LTR/ERV1	(0)	727	1	342870
3162	15.3	1.8	3.1	chr1	231514428	231515046	(17441376)	C	L1PB4	LINE/L1	(14)	6142	5532	343627
992	25.2	4.2	1.8	chr1	231530053	231530331	(17426091)	C	MLT1F1	LTR/ERVL-MaLR	(283)	286	1	343649
3120	11.4	8.7	0.2	chr1	231725248	231725740	(17230682)	+	MER66C	LTR/ERV1	1	539	(16)	343977
422	24.9	2.3	9.1	chr1	232949618	232949717	(16006705)	+	MER5B	DNA/hAT-Charlie	1	88	(90)	345697
1615	17.0	19.5	0.5	chr1	232949718	232950119	(16006303)	+	LTR54B	LTR/ERV1	1	497	(1)	345698
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
2475	8.8	0.7	0.3	chr1	233668611	233668904	(15287518)	C	AluSq2	SINE/Alu	(18)	295	1	346739
533	32.8	6.8	1.9	chr1	233668905	233669083	(15287339)	C	L1ME4c	LINE/L1	(383)	447	257	346738
13	18.1	3.5	6.8	chr1	233669155	233669211	(15287211)	+	(TTATT)n	Simple_repeat	1	59	(0)	346740
2938	17.1	2.1	0.4	chr1	234360950	234361511	(14594911)	C	LTR73	LTR/ERV1	(0)	572	1	347734
1932	22.5	7.5	4.6	chr1	234361535	234361858	(14594564)	+	Zaphod	DNA/hAT-Tip100	230	576	(3455)	347735
38	0.0	0.0	0.0	chr1	234491193	234491225	(14465197)	+	(AC)n	Simple_repeat	1	33	(0)	347951
23	12.6	0.0	0.0	chr1	234491226	234491260	(14465162)	+	(GA)n	Simple_repeat	1	35	(0)	347952
34	26.1	1.6	1.4	chr1	234546919	234547040	(14409382)	+	GA-rich	Low_complexity	1	122	(0)	348062
346	30.9	11.7	5.5	chr1	234547192	234547390	(14409032)	+	MIRb	SINE/MIR	25	237	(25)	348063
396	32.7	7.0	0.8	chr1	234553881	234554069	(14402353)	C	MIRc	SINE/MIR	(70)	198	3	348077
16	17.7	2.6	0.0	chr1	234609455	234609492	(14346930)	+	(GCC)n	Simple_repeat	1	39	(0)	348164
19	7.2	0.0	0.0	chr1	234609516	234609544	(14346878)	+	(GGA)n	Simple_repeat	1	29	(0)	348165
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
12	14.4	0.0	0.0	chr1	234724911	234724934	(14231488)	+	(GAGG)n	Simple_repeat	1	24	(0)	348336
2036	23.4	5.5	3.5	chr1	234866282	234866450	(14089972)	C	MLT1F	LTR/ERVL-MaLR	(382)	166	1	348566
222	28.3	11.7	7.0	chr1	234874713	234874826	(14081596)	C	L3	LINE/CR1	(12)	4087	3968	348584
504	30.1	13.3	2.7	chr1	234875130	234875505	(14080917)	+	L1MC5a	LINE/L1	2352	2773	(4)	348585
234	25.0	12.5	5.6	chr1	234893615	234893703	(14062719)	C	Charlie17a	DNA/hAT-Charlie	(4)	213	118	348620
404	28.7	14.6	0.0	chr1	234893825	234893988	(14062434)	C	MIRc	SINE/MIR	(16)	252	61	348621
42	0.0	2.4	0.0	chr1	234894106	234894147	(14062275)	+	(AAAC)n	Simple_repeat	1	43	(0)	348622
563	28.0	10.4	0.8	chr1	235048012	235048188	(13908234)	+	LTR78	LTR/ERV1	1103	1303	(1)	348908
13	22.1	5.6	1.8	chr1	235327257	235327310	(13629112)	+	(GCCCGGC)n	Simple_repeat	1	57	(0)	349500
3417	7.3	0.7	0.2	chr1	235410260	235410699	(13545723)	C	MER41A	LTR/ERV1	(112)	442	1	349694
3743	10.1	3.4	0.6	chr1	235410700	235411244	(13545178)	C	MER41-int	LTR/ERV1	(1488)	6268	5415	349694
2680	14.5	11.3	3.9	chr1	235589033	235589593	(13366829)	+	LTR18B	LTR/ERVL	1	608	(6)	350050
375	32.1	1.5	1.5	chr1	236091715	236091850	(12864572)	C	MLT1J	LTR/ERVL-MaLR	(259)	253	118	350980
256	21.4	9.7	0.0	chr1	236091950	236092005	(12864417)	C	MLT1J	LTR/ERVL-MaLR	(450)	62	1	350980
3588	13.4	3.4	1.8	chr1	236287936	236288537	(12667885)	+	LTR9	LTR/ERV1	1	612	(0)	351315
16	12.0	2.6	2.6	chr1	236288621	236288658	(12667764)	+	A-rich	Low_complexity	1	39	(0)	351316
1491	19.0	4.7	3.7	chr1	236314106	236314209	(12642213)	C	AluJb	SINE/Alu	(13)	299	194	351368
4408	7.3	0.2	0.2	chr1	236314210	236314760	(12641662)	+	MER41A	LTR/ERV1	1	551	(3)	351369
1638	15.2	9.8	2.5	chr1	236315451	236315612	(12640810)	+	AluJb	SINE/Alu	2	192	(120)	351372
3904	13.2	1.6	8.1	chr1	236315613	236316352	(12640070)	+	LTR8	LTR/ERV1	1	691	(0)	351373
4051	11.5	0.8	2.0	chr1	236351728	236352219	(12604203)	C	MER41E	LTR/ERV1	(99)	496	1	351444
1369	13.1	3.3	3.7	chr1	236352220	236352422	(12604000)	C	LTR54	LTR/ERV1	(306)	204	1	351441
1827	17.0	0.0	3.5	chr1	236352423	236352565	(12603857)	+	AluJr	SINE/Alu	1	141	(171)	351446
2352	9.5	0.0	0.0	chr1	236352566	236352860	(12603562)	+	AluSx1	SINE/Alu	1	295	(17)	351447
1909	14.7	3.6	0.7	chr1	236397128	236397426	(12558996)	+	AluJr	SINE/Alu	1	308	(4)	351541
281	29.4	14.2	5.2	chr1	236397550	236397721	(12558701)	+	L3	LINE/CR1	3735	3924	(175)	351542
257	27.5	11.8	7.8	chr1	236794837	236794990	(12161432)	C	MIRc	SINE/MIR	(24)	244	84	352267
2036	16.5	0.3	0.0	chr1	241695833	241696141	(7260281)	+	AluJb	SINE/Alu	1	310	(2)	359669
4382	12.6	0.0	0.3	chr1	241696323	241696958	(7259464)	C	MER41B	LTR/ERV1	(0)	634	1	359670
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
1016	22.1	7.6	16.8	chr1	244302552	244303063	(4653359)	+	L1MC4	LINE/L1	6469	6929	(1113)	363934
4024	15.3	1.5	4.8	chr1	244303080	244303826	(4652596)	+	MER50	LTR/ERV1	1	722	(12)	363935
11793	14.8	7.4	5.3	chr1	244393580	244394239	(4562183)	C	ERVL-int	LTR/ERVL	(1829)	3928	3285	364132
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
2054	17.6	18.7	3.7	chr1	246110332	246110849	(2845573)	C	LTR18B	LTR/ERVL	(0)	614	1	366955
2089	12.5	2.4	0.0	chr1	246169627	246169915	(2786507)	+	AluSx	SINE/Alu	1	296	(16)	367054
308	30.1	6.2	2.9	chr1	246182388	246182558	(2773864)	C	MIR3	SINE/MIR	(12)	196	20	367067
4014	7.0	0.6	2.4	chr1	246268050	246268417	(2688005)	+	MER41A	LTR/ERV1	1	371	(183)	367175
18	0.0	0.0	0.0	chr1	247104643	247104662	(1851760)	+	(TA)n	Simple_repeat	1	20	(0)	368655
182	19.2	10.3	0.0	chr1	247361153	247361204	(1595218)	C	OldhAT1	DNA/hAT-Ac	(869)	1979	1922	369021
411	18.1	12.3	5.4	chr1	247361421	247361586	(1594836)	C	LTR49-int	LTR/ERV1	(7792)	1252	1114	369008
2194	19.4	6.4	13.9	chr1	247367537	247367831	(1588591)	C	LTR49-int	LTR/ERV1	(5852)	479	204	369022
1608	16.7	1.9	2.2	chr1	247367833	247367906	(1588516)	+	AluJb	SINE/Alu	1	74	(238)	369034
4117	13.4	1.1	1.3	chr1	247367907	247368541	(1587881)	+	MER41B	LTR/ERV1	1	634	(0)	369035
2544	20.9	6.5	4.8	chr1	247374735	247374850	(1581572)	+	LTR8A	LTR/ERV1	1	124	(603)	369051
4700	11.6	2.3	2.2	chr1	247374851	247375540	(1580882)	+	LTR8	LTR/ERV1	1	691	(0)	369052
2041	9.9	21.4	0.0	chr1	248335766	248336117	(620305)	C	LTR7	LTR/ERV1	(2)	448	1	370293
2323	10.2	5.1	1.3	chr1	248336118	248336494	(619928)	C	HERVH-int	LTR/ERV1	(0)	7713	7322	370293
608	0.0	0.0	21.5	chr1	248873855	248873961	(82461)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	370918
629	1.4	0.0	0.0	chr1	248874248	248874319	(82103)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	370919
227	17.5	2.4	0.0	chr1	248874345	248874384	(82038)	C	MER66C	LTR/ERV1	(148)	407	367	370920
12	19.9	9.6	0.0	chr10	1048949	1049000	(132748422)	+	(CCAGCG)n	Simple_repeat	1	57	(0)	372219
181	26.2	3.0	5.8	chr10	3805349	3805417	(129992005)	C	AmnSINE1	SINE/5S-Deu-L2	(394)	181	115	375583
141	39.9	0.1	1.1	chr10	3827868	3828576	(129968846)	+	(TG)n	Simple_repeat	1	710	(0)	375612
222	24.4	2.5	7.1	chr10	3829898	3829981	(129967441)	+	L2b	LINE/L2	3296	3375	(0)	375613
241	22.8	0.0	3.4	chr10	3890734	3890792	(129906630)	+	MER102b	DNA/hAT-Charlie	283	339	(2)	375714
4359	11.5	1.4	0.6	chr10	3890830	3891458	(129905964)	+	MER41B	LTR/ERV1	1	634	(0)	375715
21	0.0	7.5	4.7	chr10	4826284	4826323	(128971099)	+	(GCG)n	Simple_repeat	1	43	(0)	376971
3987	7.7	2.4	0.2	chr10	4866728	4867249	(128930173)	C	LTR8	LTR/ERV1	(157)	534	1	377027
1475	26.2	9.0	0.7	chr10	4867250	4867706	(128929716)	C	L1MD2	LINE/L1	(139)	6220	5722	377029
36	24.6	0.0	0.0	chr10	5548898	5548976	(128248446)	+	(CA)n	Simple_repeat	1	79	(0)	377908
4781	13.4	2.5	1.6	chr10	5980894	5981651	(127815771)	+	Tigger4	DNA/TcMar-Tigger	1207	1971	(760)	378678
210	24.4	0.0	0.0	chr10	6581938	6581982	(127215440)	+	L2c	LINE/L2	3331	3375	(12)	379730
368	26.1	5.2	0.0	chr10	7028322	7028413	(126769009)	C	Charlie9	DNA/hAT-Charlie	(2660)	97	1	380441
2069	15.7	12.4	2.6	chr10	7028547	7028931	(126768491)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	380442
3434	15.2	1.2	0.5	chr10	9825470	9826030	(123971392)	+	MER61E	LTR/ERV1	1	565	(4)	384785
198	21.3	7.8	0.0	chr10	11179000	11179046	(122618376)	C	MIRc	SINE/MIR	(114)	154	104	386578
1284	22.4	10.0	2.4	chr10	11499443	11499868	(122297554)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	386964
3965	8.5	4.0	0.0	chr10	12265062	12265593	(121531829)	C	MER41A	LTR/ERV1	(0)	554	1	388528
229	22.6	5.4	0.0	chr10	15196148	15196200	(118601222)	+	CR1-3_Croc	LINE/CR1	3544	3599	(6)	393817
467	31.7	4.3	1.9	chr10	15440719	15440924	(118356498)	+	MIR	SINE/MIR	52	262	(0)	394268
4147	10.3	1.9	4.6	chr10	15627751	15628324	(118169098)	+	MER41B	LTR/ERV1	1	570	(64)	394578
2025	14.6	9.3	4.9	chr10	17386607	17386994	(116410428)	C	MER48	LTR/ERV1	(0)	407	1	397282
225	31.6	3.6	9.5	chr10	17386995	17387141	(116410281)	C	LTR33	LTR/ERVL	(341)	174	37	397283
2706	18.6	2.5	0.2	chr10	17425839	17426344	(116371078)	+	LTR53	LTR/ERVL	2	519	(0)	397359
779	26.0	4.0	1.8	chr10	17662596	17662818	(116134604)	+	MIR	SINE/MIR	6	233	(29)	397832
2767	18.1	2.5	1.6	chr10	20657973	20658539	(113138883)	C	LTR73	LTR/ERV1	(0)	572	1	402334
364	26.1	10.3	3.2	chr10	21079381	21079527	(112717895)	C	MIRc	SINE/MIR	(71)	197	34	402944
244	38.5	11.4	1.1	chr10	21090801	21091170	(112706252)	+	L2	LINE/L2	2327	2739	(680)	402963
276	28.6	11.1	3.5	chr10	21095094	21095209	(112702213)	+	MER5A	DNA/hAT-Charlie	64	189	(0)	402970
2310	9.8	0.0	2.7	chr10	21097171	21097466	(112699956)	+	AluSg	SINE/Alu	1	288	(22)	402975
676	22.9	2.5	2.5	chr10	21208721	21208881	(112588541)	C	MLT1J2	LTR/ERVL-MaLR	(279)	169	9	403153
287	32.5	7.5	0.8	chr10	21209040	21209163	(112588259)	C	MLT1J	LTR/ERVL-MaLR	(147)	365	233	403154
2370	9.7	0.0	0.0	chr10	21263683	21263982	(112533440)	+	AluSq2	SINE/Alu	1	300	(13)	403271
2360	21.7	1.1	7.9	chr10	21263983	21264086	(112533336)	C	MER87	LTR/ERV1	(464)	77	1	403270
384	23.2	2.8	6.8	chr10	21264087	21264124	(112533298)	C	MIR	SINE/MIR	(104)	158	121	403269
1741	19.9	0.3	0.3	chr10	21365987	21366288	(112431134)	+	AluJo	SINE/Alu	1	302	(10)	403519
2228	10.2	1.4	0.0	chr10	21366289	21366581	(112430841)	+	AluSp	SINE/Alu	3	299	(14)	403520
397	32.1	21.4	0.6	chr10	21406864	21407204	(112390218)	+	L1M6	LINE/L1	110	540	(5956)	403617
203	32.7	6.0	4.7	chr10	22017350	22017564	(111779858)	C	L2a	LINE/L2	(11)	3415	3198	404689
629	26.3	6.3	2.8	chr10	22017637	22017851	(111779571)	C	MIRb	SINE/MIR	(42)	226	4	404690
223	30.6	2.9	2.9	chr10	22620374	22620515	(111176907)	+	MIRc	SINE/MIR	6	145	(63)	405519
605	25.1	14.2	0.5	chr10	22620535	22620734	(111176688)	+	MER102a	DNA/hAT-Charlie	34	265	(65)	405520
2712	22.9	6.8	1.3	chr10	22631643	22632403	(111165019)	+	L1MC4a	LINE/L1	7076	7881	(1)	405531
12	8.5	7.0	6.5	chr10	23438858	23438900	(110358522)	+	(CCGCG)n	Simple_repeat	1	46	(0)	406900
2353	18.1	11.6	0.2	chr10	23512421	23512907	(110284515)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	407053
644	31.9	6.5	4.7	chr10	24897646	24898053	(108899369)	+	L1ME4a	LINE/L1	5414	5829	(295)	409356
1245	13.2	0.0	0.0	chr10	26675713	26675886	(107121536)	+	AluYc	SINE/Alu	124	297	(2)	412111
74	6.1	0.9	1.8	chr10	26675887	26675994	(107121428)	+	(GAAG)n	Simple_repeat	1	109	(0)	412112
13	23.3	3.0	5.8	chr10	27155282	27155348	(106642074)	+	G-rich	Low_complexity	1	69	(0)	412953
851	15.3	0.7	3.5	chr10	27241586	27241729	(106555693)	+	FLAM_C	SINE/Alu	1	140	(3)	413146
2155	11.8	0.0	0.7	chr10	28811491	28811787	(104985635)	C	AluSx1	SINE/Alu	(17)	295	1	415793
4301	12.5	1.7	0.2	chr10	28811807	28812430	(104984992)	+	MER41B	LTR/ERV1	1	634	(0)	415794
29	3.0	0.0	0.0	chr10	28839598	28839631	(104957791)	+	(A)n	Simple_repeat	1	34	(0)	415846
410	29.9	11.3	5.8	chr10	28984699	28984800	(104812622)	+	MIRb	SINE/MIR	13	126	(142)	416078
5435	15.8	2.9	0.7	chr10	30190381	30191325	(103606097)	+	LTR13A	LTR/ERVK	1	966	(0)	418213
14	12.2	0.0	0.0	chr10	30348972	30348998	(103448424)	+	(GAGAG)n	Simple_repeat	1	27	(0)	418533
4044	10.9	4.7	1.6	chr10	30425042	30425534	(103371888)	C	MER41B	LTR/ERV1	(113)	521	1	418689
1125	21.8	7.7	8.2	chr10	30425535	30425843	(103371579)	+	MLT1A0	LTR/ERVL-MaLR	68	363	(2)	418688
2433	15.3	5.1	2.5	chr10	30599847	30600322	(103197100)	+	L1PB3	LINE/L1	5660	6148	(6)	419065
1637	18.7	2.9	2.4	chr10	31014224	31014595	(102782827)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	419694
668	28.8	6.9	3.0	chr10	31014596	31014813	(102782609)	+	MIR	SINE/MIR	33	262	(0)	419693
2678	13.2	4.5	1.6	chr10	31972386	31972817	(101824605)	C	MER83	LTR/ERV1	(0)	448	4	421081
679	32.7	7.9	1.5	chr10	32059309	32059581	(101737841)	C	MER102b	DNA/hAT-Charlie	(49)	292	1	421240
977	19.2	2.9	0.0	chr10	33056853	33057019	(100740403)	C	AluJo	SINE/Alu	(0)	312	141	422698
3736	11.9	0.6	0.8	chr10	33057020	33057543	(100739879)	+	MER41B	LTR/ERV1	5	527	(107)	422699
527	21.8	15.5	1.7	chr10	34758274	34758450	(99038972)	C	MIRb	SINE/MIR	(60)	208	3	425227
330	24.2	0.0	4.5	chr10	35126344	35126434	(98670988)	+	MLT1E2	LTR/ERVL-MaLR	249	327	(300)	426037
847	13.1	1.6	1.6	chr10	35126436	35126557	(98670865)	+	AluSc	SINE/Alu	150	271	(38)	426038
11	20.1	9.1	2.8	chr10	35127069	35127134	(98670288)	+	(GCCGGCT)n	Simple_repeat	1	72	(0)	426040
17	20.1	3.5	7.8	chr10	35127230	35127316	(98670106)	+	(AGCGG)n	Simple_repeat	1	90	(0)	426041
3190	12.2	1.8	6.8	chr10	35391066	35391638	(98405784)	C	LTR10A	LTR/ERV1	(65)	544	1	426534
259	34.4	6.3	6.6	chr10	35392330	35392600	(98404822)	C	L2b	LINE/L2	(44)	3331	3062	426537
477	21.5	26.5	1.1	chr10	38403392	38403579	(95393843)	+	FRAM	SINE/Alu	45	297	(5)	430974
255	34.1	3.2	0.0	chr10	42783194	42783284	(91014138)	C	MIR3	SINE/MIR	(92)	116	23	432545
18	10.4	0.0	0.0	chr10	43138783	43138813	(90658609)	+	(TGTTT)n	Simple_repeat	1	31	(0)	432987
1433	11.3	4.4	3.2	chr10	43407937	43408183	(90389239)	C	AluJb	SINE/Alu	(23)	289	40	433436
28	11.6	4.6	3.7	chr10	43409350	43409420	(90388002)	+	G-rich	Low_complexity	1	71	(0)	433437
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
1853	12.8	1.4	3.6	chr10	43418428	43418731	(90378691)	+	AluSz	SINE/Alu	8	304	(8)	433461
19	15.9	2.4	0.0	chr10	43648829	43648870	(90148552)	+	(GCCGGC)n	Simple_repeat	1	43	(0)	433924
30	0.0	0.0	0.0	chr10	44913453	44913478	(88883944)	+	(CA)n	Simple_repeat	1	26	(0)	435408
4627	10.8	1.1	0.2	chr10	45410801	45411428	(88385994)	C	MER41B	LTR/ERV1	(0)	634	1	436025
446	26.1	1.2	6.4	chr10	46048945	46049064	(87748358)	C	L1ME3Cz	LINE/L1	(303)	5821	5708	437087
2568	5.0	0.0	0.3	chr10	46049065	46049364	(87748058)	+	AluY	SINE/Alu	1	299	(12)	437088
446	26.1	1.1	6.2	chr10	46049365	46049438	(87747984)	C	L1ME3Cz	LINE/L1	(417)	5707	5640	437087
11	18.4	6.7	2.1	chr10	48306614	48306658	(85490764)	+	(GCGCGT)n	Simple_repeat	1	48	(0)	440378
181	32.5	7.8	1.2	chr10	48467738	48467821	(85329601)	+	MIR	SINE/MIR	17	106	(156)	440578
1089	21.1	10.1	6.7	chr10	48467932	48468206	(85329216)	+	MER96B	DNA/hAT-Tip100	1	280	(137)	440579
1083	23.8	2.9	1.9	chr10	48481311	48481580	(85315842)	+	Arthur1C	DNA/hAT-Tip100	88	360	(3)	440595
1675	22.8	4.7	0.7	chr10	48481666	48482358	(85315064)	C	L1M5	LINE/L1	(570)	5609	4885	440596
394	28.3	12.1	4.4	chr10	49183586	49183814	(84613608)	+	MIR	SINE/MIR	2	250	(12)	441551
481	29.6	11.9	3.8	chr10	49183920	49184960	(84612462)	+	L1ME3G	LINE/L1	1	599	(398)	441552
9213	5.2	4.5	1.1	chr10	50355274	50356582	(83440840)	+	SVA_B	Retroposon/SVA	29	1383	(0)	443227
1653	14.4	7.7	2.6	chr10	50358432	50358702	(83438720)	+	AluSz6	SINE/Alu	4	289	(23)	443232
180	28.6	7.3	7.3	chr10	50393652	50393719	(83403703)	+	L3	LINE/CR1	3935	4002	(97)	443286
219	35.6	0.0	0.0	chr10	50565513	50565571	(83231851)	+	MIR	SINE/MIR	13	71	(191)	443551
225	26.4	1.4	1.4	chr10	50586311	50586383	(83211039)	+	Charlie8	DNA/hAT-Charlie	2356	2428	(0)	443585
498	22.9	13.6	0.0	chr10	61831139	61831290	(71966132)	+	MER45A	DNA/hAT-Tip100	3	171	(7)	459117
56	0.0	0.0	0.0	chr10	61831298	61831345	(71966077)	+	(GT)n	Simple_repeat	1	48	(0)	459118
9239	20.3	5.3	4.9	chr10	63041935	63042962	(70754460)	+	L1M4	LINE/L1	146	1164	(6353)	461041
1976	13.9	1.0	0.3	chr10	63102550	63102843	(70694579)	C	AluSz6	SINE/Alu	(16)	296	1	461169
9232	22.1	12.8	7.5	chr10	63102844	63103258	(70694164)	C	Arthur1	DNA/hAT-Tip100	(3435)	512	18	461157
1752	20.1	2.8	7.1	chr10	63107839	63108032	(70689390)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	198	461183
3527	16.1	12.1	3.9	chr10	63108033	63108420	(70689002)	+	LTR8B	LTR/ERV1	1	434	(386)	461184
15	25.2	4.8	1.5	chr10	63133249	63133311	(70664111)	+	(GGC)n	Simple_repeat	1	66	(0)	461239
58	7.6	0.0	1.2	chr10	67849220	67849359	(65948063)	+	(GGAGG)n	Simple_repeat	1	138	(0)	468032
1974	11.9	1.4	1.0	chr10	68555017	68555310	(65242112)	+	AluSx	SINE/Alu	1	295	(17)	469528
651	6.7	0.0	0.0	chr10	68555311	68555385	(65242037)	C	AluYb8	SINE/Alu	(243)	75	1	469529
12	0.0	4.3	4.2	chr10	69123850	69123872	(64673550)	+	(TCCT)n	Simple_repeat	1	24	(0)	470925
357	34.8	1.5	0.7	chr10	69317660	69317795	(64479627)	+	MIRb	SINE/MIR	28	164	(104)	471358
1905	14.5	0.7	1.3	chr10	69410235	69410538	(64386884)	+	AluJo	SINE/Alu	1	302	(10)	471538
2666	13.0	0.2	0.2	chr10	69410648	69411056	(64386366)	+	LTR47B2	LTR/ERVL	1	409	(25)	471539
275	11.6	2.3	0.0	chr10	70232747	70232789	(63564633)	+	MIR3	SINE/MIR	113	156	(52)	473005
18	17.2	0.0	2.4	chr10	70404143	70404204	(63393218)	+	(GCT)n	Simple_repeat	1	60	(0)	473402
14	21.3	1.8	5.4	chr10	70404189	70404243	(63393179)	+	(CTGAGG)n	Simple_repeat	1	56	(0)	473403
22	15.4	0.0	0.0	chr10	70404220	70404300	(63393122)	+	(GCGGCG)n	Simple_repeat	1	81	(0)	473404
4718	9.7	1.9	0.0	chr10	70590200	70590821	(63206601)	C	MER41B	LTR/ERV1	(0)	634	1	473772
449	30.8	4.3	6.2	chr10	70661665	70661969	(63135453)	+	L2b	LINE/L2	3048	3346	(29)	473900
493	32.1	5.5	10.5	chr10	70666935	70667314	(63130108)	C	L2b	LINE/L2	(2)	3373	3014	473915
1752	20.3	3.6	1.5	chr10	70667318	70667726	(63129696)	+	LTR73	LTR/ERV1	3	420	(152)	473916
367	32.8	7.8	3.3	chr10	70669591	70669773	(63127649)	+	MIR3	SINE/MIR	12	203	(5)	473918
264	21.1	40.0	0.9	chr10	70671882	70671981	(63125441)	C	MIRb	SINE/MIR	(101)	161	23	473923
575	23.5	6.7	1.3	chr10	70741306	70741460	(63055962)	+	MER91B	DNA/hAT-Tip100	3	166	(24)	474038
852	19.9	3.2	3.2	chr10	71378548	71378734	(62418688)	+	MER5A	DNA/hAT-Charlie	3	189	(0)	475129
943	25.1	1.3	1.7	chr10	71378735	71378948	(62418474)	+	LTR16C	LTR/ERVL	275	487	(2)	475130
356	31.0	1.7	0.0	chr10	71753872	71753984	(62043438)	C	MIRb	SINE/MIR	(34)	234	120	475841
404	26.1	6.9	0.0	chr10	71860652	71860785	(61936637)	C	Charlie4z	DNA/hAT-Charlie	(19)	148	5	476035
15	16.1	3.5	0.0	chr10	72260769	72260804	(61536618)	+	(CT)n	Simple_repeat	1	37	(0)	476890
199	23.2	25.2	1.0	chr10	72277007	72277102	(61520320)	C	MER5A	DNA/hAT-Charlie	(0)	189	63	476926
193	25.0	7.3	2.6	chr10	72277085	72277162	(61520260)	+	L2	LINE/L2	65	146	(3273)	476927
295	25.5	4.7	5.6	chr10	72277272	72277379	(61520043)	C	MIRc	SINE/MIR	(44)	224	118	476928
2138	12.3	0.7	0.0	chr10	72282150	72282450	(61514972)	C	AluSx	SINE/Alu	(9)	303	1	476943
3303	15.0	5.3	2.3	chr10	72282452	72282480	(61514942)	+	L1MB8	LINE/L1	5556	5584	(594)	476942
2082	12.7	0.0	5.3	chr10	72282481	72282802	(61514620)	+	AluSx1	SINE/Alu	1	305	(7)	476944
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
570	28.6	3.9	3.4	chr10	72321530	72321726	(61475696)	+	MIRb	SINE/MIR	48	239	(23)	477047
16	9.5	5.9	0.0	chr10	72321731	72321766	(61475656)	+	(CCTCTC)n	Simple_repeat	1	38	(0)	477048
469	26.1	12.4	2.1	chr10	72321905	72322092	(61475330)	C	MIRb	SINE/MIR	(57)	211	2	477049
2593	12.6	11.9	0.0	chr10	72888319	72888746	(60908676)	+	LTR19A	LTR/ERV1	1	486	(0)	478225
4171	4.1	0.0	0.2	chr10	72903901	72904364	(60893058)	+	LTR2	LTR/ERV1	1	463	(0)	478257
465	23.6	16.9	4.9	chr10	72904365	72904508	(60892914)	C	MLT1J	LTR/ERVL-MaLR	(102)	410	227	478256
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
401	30.4	13.6	2.6	chr10	73456173	73456466	(60340956)	C	L2c	LINE/L2	(12)	3363	3055	479318
1482	16.2	4.2	4.2	chr10	73456498	73456858	(60340564)	+	L1MB8	LINE/L1	4807	5167	(979)	479319
3521	17.0	2.8	7.0	chr10	73742860	73743582	(60053840)	C	LTR8	LTR/ERV1	(0)	691	1	479874
273	25.6	3.5	4.7	chr10	73743583	73743617	(60053805)	+	L2a	LINE/L2	3392	3426	(0)	479873
443	18.3	5.3	11.3	chr10	73879510	73879651	(59917771)	+	L2c	LINE/L2	3254	3386	(1)	480075
527	28.0	3.6	3.3	chr10	73879934	73880123	(59917299)	C	MIRb	SINE/MIR	(8)	260	60	480076
7841	4.5	0.4	0.0	chr10	73930686	73931640	(59865782)	C	LTR13A	LTR/ERVK	(0)	966	8	480193
3889	13.4	3.1	2.1	chr10	74179295	74179921	(59617501)	+	MER41B	LTR/ERV1	1	634	(0)	480714
24	31.9	1.0	1.9	chr10	74826673	74826776	(58970646)	+	(GGC)n	Simple_repeat	1	105	(0)	481944
295	35.6	12.9	0.9	chr10	75110682	75110823	(58686599)	+	MIRb	SINE/MIR	5	175	(93)	482442
1619	15.1	5.8	1.4	chr10	75209596	75209712	(58587710)	C	AluJb	SINE/Alu	(178)	134	1	482669
1953	16.7	15.5	2.5	chr10	75209713	75209895	(58587527)	C	LTR54	LTR/ERV1	(331)	179	1	482668
331	18.1	7.7	0.0	chr10	75269596	75269667	(58527755)	+	MER3	DNA/hAT-Charlie	132	209	(0)	482794
565	23.2	1.2	6.2	chr10	75269767	75269945	(58527477)	C	MLT1J	LTR/ERVL-MaLR	(328)	184	15	482792
217	18.8	11.1	0.0	chr10	78043580	78043627	(55753795)	C	L2b	LINE/L2	(19)	3356	3303	487051
799	18.6	13.2	1.4	chr10	78043852	78044064	(55753358)	+	Tigger7	DNA/TcMar-Tigger	2060	2301	(190)	487052
643	16.0	13.2	0.0	chr10	78044054	78044197	(55753225)	+	Tigger7	DNA/TcMar-Tigger	2326	2491	(0)	487053
233	25.0	0.0	0.0	chr10	78256180	78256231	(55541191)	+	MamRep605	LTR?	489	540	(309)	487477
201	35.6	5.5	0.0	chr10	78256414	78256517	(55540905)	C	MER5B	DNA/hAT-Charlie	(65)	113	4	487478
13	19.0	0.0	5.0	chr10	78303451	78303490	(55493932)	+	(CCGC)n	Simple_repeat	1	40	(0)	487572
12	19.6	0.0	0.0	chr10	78973519	78973547	(54823875)	+	(CAGCC)n	Simple_repeat	1	29	(0)	488802
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
240	30.4	9.9	2.2	chr10	79084531	79084649	(54712773)	+	MIR3	SINE/MIR	77	201	(7)	489026
246	28.1	0.8	0.4	chr10	79084638	79084719	(54712703)	+	MIRc	SINE/MIR	59	141	(127)	489027
310	30.9	1.4	2.1	chr10	79446835	79446976	(54350446)	+	MIR	SINE/MIR	29	175	(93)	489642
642	29.6	4.5	2.1	chr10	79488626	79488818	(54308604)	C	MIR	SINE/MIR	(64)	198	1	489731
994	26.2	10.4	1.6	chr10	79489012	79489380	(54308042)	+	MLT1I	LTR/ERVL-MaLR	1	405	(6)	489732
3126	13.9	0.4	0.6	chr10	80896897	80897389	(52900033)	+	LTR72B	LTR/ERV1	7	498	(2)	491881
1988	11.8	0.0	0.0	chr10	84525091	84525370	(49272052)	+	MER61E	LTR/ERV1	1	280	(289)	496993
6224	6.8	3.2	0.5	chr10	84525371	84526129	(49271293)	C	LTR17	LTR/ERV1	(0)	780	1	496994
18	20.3	2.2	0.0	chr10	86521644	86521688	(47275734)	+	(GCC)n	Simple_repeat	1	46	(0)	499653
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
2972	18.0	5.2	4.3	chr10	89354864	89355428	(44441994)	C	LTR8A	LTR/ERV1	(153)	574	1	504239
540	10.6	0.0	1.5	chr10	89355429	89355508	(44441914)	+	MER72	LTR/ERV1	653	764	(4)	504247
1835	19.8	10.8	9.0	chr10	89355504	89355523	(44441899)	C	MER21C	LTR/ERVL	(365)	573	556	504248
4085	12.8	2.5	3.7	chr10	89355524	89356165	(44441257)	+	MER41B	LTR/ERV1	1	634	(0)	504249
27	16.1	4.1	2.6	chr10	91410234	91410306	(42387116)	+	G-rich	Low_complexity	1	76	(0)	507281
239	29.3	1.2	1.0	chr10	95532128	95532233	(38265189)	+	MIRb	SINE/MIR	51	156	(112)	514437
483	31.0	15.8	1.4	chr10	96619006	96619221	(37178201)	+	MIRb	SINE/MIR	2	254	(14)	516286
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
7679	5.5	1.6	2.4	chr10	97417835	97418118	(36379304)	C	LTR5_Hs	LTR/ERVK	(684)	284	1	517942
734	22.1	12.8	6.9	chr10	97418119	97418131	(36379291)	+	LTR16B2	LTR/ERVL	450	462	(0)	517941
1132	14.2	0.0	1.8	chr10	97418200	97418368	(36379054)	C	FAM	SINE/Alu	(10)	175	10	517944
14	18.2	0.0	0.0	chr10	97737144	97737174	(36060248)	+	(GCG)n	Simple_repeat	1	31	(0)	518629
2354	23.1	6.7	2.5	chr10	97969796	97970526	(35826896)	+	L2a	LINE/L2	2221	2984	(435)	519106
913	22.6	2.5	4.4	chr10	99994122	99994371	(33803051)	+	MIR	SINE/MIR	10	254	(8)	522480
12	18.8	4.3	4.2	chr10	100267768	100267813	(33529609)	+	GA-rich	Low_complexity	1	48	(0)	523048
8345	7.4	0.5	0.0	chr10	101033533	101034560	(32762862)	C	LTR5A	LTR/ERVK	(0)	1033	1	524364
7601	7.5	0.9	0.2	chr10	102454375	102455335	(31342087)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	526959
1092	13.5	2.9	4.5	chr10	102455336	102455452	(31341970)	C	AluJb	SINE/Alu	(66)	246	134	526958
897	14.5	0.0	0.0	chr10	102455453	102455576	(31341846)	C	AluJo	SINE/Alu	(188)	124	1	526960
19	30.7	2.2	2.1	chr10	109923489	109923579	(23873843)	+	(GCGG)n	Simple_repeat	1	93	(0)	538603
12	16.4	5.9	0.0	chr10	117241095	117241128	(16556294)	+	(GCG)n	Simple_repeat	1	36	(0)	550134
4200	9.6	0.4	0.0	chr10	119687865	119688416	(14109006)	C	MER41A	LTR/ERV1	(0)	554	1	554382
927	26.4	19.1	2.6	chr10	119688417	119688428	(14108994)	+	L1MEg	LINE/L1	608	618	(5624)	554381
875	20.5	8.7	1.5	chr10	119688429	119688631	(14108791)	C	MER20	DNA/hAT-Charlie	(0)	219	1	554383
587	29.4	14.6	4.1	chr10	120005729	120006168	(13791254)	C	MLT1L	LTR/ERVL-MaLR	(10)	600	107	554972
4492	11.1	0.6	0.5	chr10	123782733	123783365	(10014057)	+	MER41B	LTR/ERV1	1	634	(0)	560888
496	20.9	0.7	7.6	chr10	123942005	123942149	(9855273)	+	LTR37A	LTR/ERV1	50	184	(242)	561136
3726	13.6	2.1	2.1	chr10	123942233	123942855	(9854567)	+	MER41B	LTR/ERV1	1	623	(11)	561137
16	15.4	2.8	0.0	chr10	124461792	124461827	(9335595)	+	(GCGCCG)n	Simple_repeat	1	37	(0)	561977
12	27.3	2.0	2.0	chr10	124916806	124916855	(8880567)	+	(GGC)n	Simple_repeat	1	51	(0)	562764
704	33.3	7.4	0.9	chr10	131088802	131089268	(2708154)	C	LTR33	LTR/ERVL	(7)	508	9	570226
12	13.8	4.4	6.4	chr10	131900896	131900940	(1896482)	+	(CGCCCGC)n	Simple_repeat	1	47	(0)	571060
32	7.4	0.0	0.0	chr10	131901021	131901063	(1896359)	+	(CGG)n	Simple_repeat	1	43	(0)	571061
14	19.7	1.9	5.7	chr10	132537401	132537452	(1259970)	+	G-rich	Low_complexity	1	53	(0)	571754
16	17.9	3.5	2.2	chr10	133248051	133248105	(549317)	+	G-rich	Low_complexity	1	55	(0)	572308
343	13.3	11.8	0.0	chr11	207565	207624	(134878998)	C	AluSg4	SINE/Alu	(43)	267	200	573079
296	15.2	16.5	0.0	chr11	207580	207645	(134878977)	+	SVA_F	Retroposon/SVA	344	422	(953)	573080
235	27.0	5.1	3.9	chr11	220851	220927	(134865695)	+	L1ME3G	LINE/L1	377	454	(470)	573090
252	31.2	2.1	6.8	chr11	221072	221139	(134865483)	+	L1ME3G	LINE/L1	383	451	(473)	573091
4421	9.9	2.8	0.7	chr11	329237	329833	(134756789)	+	LTR71B	LTR/ERV1	1	610	(0)	573257
1081	16.5	0.0	5.5	chr11	329941	330140	(134756482)	C	AluJb	SINE/Alu	(0)	312	124	573258
4069	8.4	1.4	2.1	chr11	352134	352592	(134734030)	C	MER41A	LTR/ERV1	(99)	455	1	573310
572	10.6	0.0	0.0	chr11	355601	355685	(134730937)	C	MER41A	LTR/ERV1	(463)	91	7	573319
255	28.7	6.3	1.4	chr11	355690	355901	(134730721)	C	LTR40b	LTR/ERVL	(37)	425	203	573320
19	26.1	2.1	5.2	chr11	506892	506986	(134579636)	+	(CGCCC)n	Simple_repeat	1	97	(0)	573470
1409	31.0	7.5	3.2	chr11	628048	628757	(134457865)	C	L1MB3	LINE/L1	(114)	6069	5327	573647
2337	7.6	0.0	2.7	chr11	921171	921471	(134165151)	C	AluSc	SINE/Alu	(16)	293	1	574106
465	25.4	4.8	0.0	chr11	1844547	1844723	(133241899)	+	L1MC4a	LINE/L1	6677	6862	(1020)	575164
13	26.4	1.6	4.6	chr11	2778867	2778930	(132307692)	+	(CCGGC)n	Simple_repeat	1	65	(0)	576139
260	30.0	26.0	1.2	chr11	2898041	2898863	(132187759)	+	L2b	LINE/L2	1797	2895	(524)	576297
285	26.8	4.7	1.2	chr11	2898960	2899042	(132187580)	+	L2b	LINE/L2	3285	3370	(5)	576298
329	32.5	8.3	6.5	chr11	2899226	2899531	(132187091)	+	L2b	LINE/L2	2932	3243	(132)	576297
2100	12.8	2.3	0.0	chr11	3403928	3404223	(131682399)	C	AluSx1	SINE/Alu	(9)	303	1	576969
4517	4.9	1.1	0.0	chr11	3509348	3509899	(131576723)	C	LTR6B	LTR/ERV1	(0)	558	1	577132
2298	11.1	0.0	0.3	chr11	3509900	3510216	(131576406)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	577133
16	21.4	0.0	2.4	chr11	3797483	3797523	(131289099)	+	(CCG)n	Simple_repeat	1	41	(0)	577720
13	16.6	7.3	0.0	chr11	3797686	3797726	(131288896)	+	GA-rich	Low_complexity	1	44	(0)	577721
16	8.7	0.0	0.0	chr11	6481521	6481545	(128605077)	+	(AGC)n	Simple_repeat	1	25	(0)	581392
3512	17.6	12.7	4.8	chr11	6683720	6684040	(128402582)	C	Zaphod3	DNA/hAT-Tip100	(0)	2623	2236	581657
33	5.2	0.0	0.0	chr11	8964364	8964403	(126122219)	+	(GGCTCA)n	Simple_repeat	1	40	(0)	584803
31	0.0	0.0	0.0	chr11	9004116	9004144	(126082478)	+	(CGCGTCC)n	Simple_repeat	1	29	(0)	584871
6532	9.6	4.9	0.9	chr11	9318776	9319704	(125766918)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	585472
4081	14.0	5.5	1.3	chr11	9319705	9320031	(125766591)	C	MER50	LTR/ERV1	(391)	343	1	585471
378	25.4	13.2	0.0	chr11	9565678	9565815	(125520807)	+	MIR	SINE/MIR	94	252	(10)	586092
588	33.6	8.3	5.4	chr11	12149088	12149866	(122936756)	C	L2c	LINE/L2	(266)	3121	2310	590330
301	30.6	6.1	1.1	chr11	12149958	12150145	(122936477)	C	L2c	LINE/L2	(1366)	2053	1856	590330
2360	9.1	0.0	1.0	chr11	12201837	12202134	(122884488)	+	AluSp	SINE/Alu	1	295	(18)	590434
11	25.0	5.6	4.0	chr11	13668410	13668481	(121418141)	+	(CTCCCG)n	Simple_repeat	1	76	(0)	592645
17	4.3	0.0	0.0	chr11	13668730	13668753	(121417869)	+	(GCG)n	Simple_repeat	1	24	(0)	592646
12	18.2	2.4	4.8	chr11	16604682	16604722	(118481900)	+	(CAGCC)n	Simple_repeat	1	42	(0)	597231
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
2499	6.2	1.6	0.0	chr11	17352169	17352474	(117734148)	C	AluY	SINE/Alu	(0)	311	1	598615
14	21.5	2.2	2.2	chr11	17353526	17353570	(117733052)	+	G-rich	Low_complexity	1	46	(0)	598618
13	0.0	0.0	0.0	chr11	17353714	17353730	(117732892)	+	(GCA)n	Simple_repeat	1	17	(0)	598619
2411	10.9	0.0	0.3	chr11	18691305	18691617	(116395005)	+	AluSx1	SINE/Alu	1	312	(0)	601037
3273	12.9	0.0	3.3	chr11	18691622	18692143	(116394479)	+	MER41B	LTR/ERV1	17	521	(113)	601026
14	0.0	0.0	4.5	chr11	18698865	18698886	(116387736)	+	(GCC)n	Simple_repeat	1	22	(0)	601053
629	18.2	0.0	0.0	chr11	19174029	19174127	(115912495)	C	MER44B	DNA/TcMar-Tigger	(0)	550	452	601735
1251	18.8	4.3	0.4	chr11	19174139	19174363	(115912259)	C	MER44B	DNA/TcMar-Tigger	(316)	234	1	601735
1382	23.1	10.1	3.2	chr11	27509848	27510281	(107576341)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	614080
1221	22.3	3.6	5.7	chr11	27510282	27510422	(107576200)	+	HAL1	LINE/L1	1600	1735	(772)	614079
13	10.8	3.1	3.0	chr11	32427016	32427047	(102659575)	+	(GGATGG)n	Simple_repeat	1	33	(0)	621577
561	33.9	14.3	2.2	chr11	34809235	34809329	(100277293)	C	L2a	LINE/L2	(0)	3426	3305	625847
2890	16.7	1.4	4.3	chr11	34809330	34809905	(100276717)	C	MER89	LTR/ERV1	(0)	559	1	625848
30	14.9	1.4	4.1	chr11	36149834	36149905	(98936717)	+	(CTCATGA)n	Simple_repeat	1	73	(0)	627946
181	19.4	7.5	7.5	chr11	43880537	43880603	(91206019)	C	L3	LINE/CR1	(110)	3989	3923	639137
2317	28.4	7.7	7.2	chr11	43952820	43953061	(91133561)	+	MLT1J2-int	LTR/ERVL-MaLR	920	1141	(246)	639257
4178	11.0	3.5	1.6	chr11	43953062	43953233	(91133389)	+	MER41B	LTR/ERV1	1	169	(465)	639261
1350	22.8	6.5	7.2	chr11	44377591	44377964	(90708658)	+	MLT1A	LTR/ERVL-MaLR	4	374	(0)	640008
546	26.7	5.1	0.8	chr11	44377970	44378101	(90708521)	+	MIR	SINE/MIR	28	165	(97)	640009
1011	26.7	5.5	6.5	chr11	44378102	44378654	(90707968)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	1	640010
4468	12.7	0.6	0.2	chr11	44530330	44530960	(90555662)	C	MER41B	LTR/ERV1	(0)	634	1	640306
297	34.8	1.8	0.9	chr11	44531095	44531207	(90555415)	+	MIR3	SINE/MIR	37	150	(58)	640307
519	24.2	2.4	5.2	chr11	44760776	44760949	(90325673)	+	MER104	DNA/TcMar-Tc2	3	171	(10)	640793
478	28.2	6.9	2.1	chr11	44760959	44761150	(90325472)	C	MIRb	SINE/MIR	(29)	239	38	640794
12	16.3	2.8	2.7	chr11	45147136	45147171	(89939451)	+	(CTCCTCG)n	Simple_repeat	1	37	(0)	641574
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
796	20.7	1.1	6.3	chr11	45185174	45185364	(89901258)	+	MER20	DNA/hAT-Charlie	1	181	(38)	641660
1566	15.5	9.0	1.8	chr11	46336575	46336852	(88749770)	C	AluJo	SINE/Alu	(12)	300	1	643797
1770	15.9	0.0	5.3	chr11	46336853	46337028	(88749594)	+	AluJo	SINE/Alu	126	290	(22)	643796
13	15.4	9.3	0.0	chr11	46391850	46391892	(88694730)	+	(GCCGC)n	Simple_repeat	1	47	(0)	643876
16	0.0	0.0	0.0	chr11	46617337	46617354	(88469268)	+	(TC)n	Simple_repeat	1	18	(0)	644307
1275	17.0	4.9	0.8	chr11	46967845	46968272	(88118350)	C	LTR54	LTR/ERV1	(7)	503	1	645009
15312	12.0	3.8	5.5	chr11	47034797	47035925	(88050697)	C	Tigger2	DNA/TcMar-Tigger	(1577)	1141	1	645121
31	0.0	3.0	0.0	chr11	47408554	47408586	(87678036)	+	(GGCCGGGC)n	Simple_repeat	1	34	(0)	645844
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
16	18.4	8.4	2.6	chr11	47553221	47553291	(87533331)	+	(GCGCCGA)n	Simple_repeat	1	77	(0)	646146
31	3.3	0.0	0.0	chr11	47944978	47945008	(87141614)	+	(AC)n	Simple_repeat	1	31	(0)	647173
371	19.5	0.0	9.8	chr11	47945038	47945119	(87141503)	C	AluJr	SINE/Alu	(105)	207	134	647174
1707	13.5	0.0	15.2	chr11	47945120	47945335	(87141287)	C	AluSz	SINE/Alu	(16)	296	87	647175
1064	29.9	8.2	1.2	chr11	57150562	57150991	(77935631)	+	MLT1J	LTR/ERVL-MaLR	5	467	(45)	653136
190	28.3	3.2	0.0	chr11	57396194	57396253	(77690369)	C	MIR3	SINE/MIR	(18)	190	129	653601
20	14.5	0.0	0.0	chr11	57761611	57761650	(77324972)	+	(TATATA)n	Simple_repeat	1	40	(0)	654423
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
17	24.7	0.0	4.2	chr11	57792416	57792463	(77294159)	+	(TG)n	Simple_repeat	1	48	(0)	654475
18	22.7	0.0	0.0	chr11	57792559	57792578	(77294044)	+	(TTTA)n	Simple_repeat	1	20	(0)	654476
2005	8.5	0.8	0.0	chr11	57792579	57792825	(77293797)	C	AluSc	SINE/Alu	(59)	250	2	654477
4225	9.2	0.0	0.4	chr11	57911171	57911726	(77174896)	C	MER41A	LTR/ERV1	(0)	554	1	654679
235	24.6	10.7	9.5	chr11	57911873	57912020	(77174602)	C	MER102c	DNA/hAT-Charlie	(75)	256	107	654682
5279	8.8	0.0	2.4	chr11	57913573	57913721	(77172901)	C	LTR8	LTR/ERV1	(542)	149	1	654686
577	28.0	9.1	5.1	chr11	57913822	57914005	(77172617)	+	MLT1J	LTR/ERVL-MaLR	3	207	(305)	654688
8732	20.9	0.7	0.6	chr11	58772705	58774468	(76312154)	+	HERV1_I-int	LTR/ERV1	3716	5480	(3321)	655962
6738	18.7	5.3	1.9	chr11	58774469	58775825	(76310797)	+	HERV1_I-int	LTR/ERV1	5586	6990	(1811)	655962
18	0.0	0.0	0.0	chr11	59669587	59669606	(75417016)	+	(T)n	Simple_repeat	1	20	(0)	657195
3242	8.6	0.2	0.0	chr11	59706910	59707327	(75379295)	+	LTR3	LTR/ERVK	5	423	(9)	657272
1439	24.9	9.7	1.4	chr11	59846340	59846874	(75239748)	+	L2a	LINE/L2	2844	3426	(0)	657552
2449	22.1	1.6	0.2	chr11	59960504	59961014	(75125608)	+	LTR53	LTR/ERVL	1	518	(1)	657716
3232	12.2	2.5	0.0	chr11	60121295	60121760	(74964862)	+	Charlie3	DNA/hAT-Charlie	1	478	(2228)	657923
183	33.3	4.8	6.1	chr11	61287467	61287613	(73799009)	C	L2b	LINE/L2	(2)	3373	3229	659873
11	27.6	0.0	0.0	chr11	61429967	61430005	(73656617)	+	(CCGCCCC)n	Simple_repeat	1	39	(0)	660145
317	25.1	7.0	3.9	chr11	61567148	61567288	(73519334)	+	MIRc	SINE/MIR	44	198	(10)	660427
315	32.1	10.4	7.0	chr11	61841555	61841778	(73244844)	+	L4_C_Mam	LINE/RTE-X	4883	5138	(0)	660923
1027	14.1	10.7	1.8	chr11	62013900	62014069	(73072553)	+	AluJo	SINE/Alu	1	187	(125)	661269
3457	11.3	6.2	4.7	chr11	62014071	62014509	(73072113)	+	MER41B	LTR/ERV1	11	433	(201)	661270
2267	10.2	0.3	0.3	chr11	62041758	62042052	(73044570)	C	AluSx1	SINE/Alu	(17)	295	1	661345
5940	13.6	2.1	1.4	chr11	62368491	62369451	(72717171)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	661940
13	22.1	2.7	0.0	chr11	62646561	62646597	(72440025)	+	(CCG)n	Simple_repeat	1	38	(0)	662469
221	28.3	0.0	1.6	chr11	62771868	62771928	(72314694)	C	MIRc	SINE/MIR	(120)	148	89	662767
359	28.5	5.1	10.9	chr11	62772013	62772233	(72314389)	+	MIRb	SINE/MIR	23	245	(23)	662768
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
6452	12.4	1.3	4.2	chr11	62860434	62861082	(72225540)	C	LTR5B	LTR/ERVK	(376)	626	1	662971
1415	14.8	9.4	0.4	chr11	62861083	62861325	(72225297)	+	AluJr	SINE/Alu	26	292	(20)	662973
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
3739	11.7	11.3	0.0	chr11	63491582	63492180	(71594442)	C	MER61F	LTR/ERV1	(0)	676	2	663751
8576	3.3	0.0	0.0	chr11	63527971	63528938	(71557684)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	663818
2083	19.6	5.0	4.5	chr11	63528939	63529316	(71557306)	+	MER21B	LTR/ERVL	492	860	(8)	663817
8930	1.6	0.0	0.0	chr11	63530314	63531281	(71555341)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	663822
1967	17.5	9.9	5.2	chr11	63531292	63531754	(71554868)	C	MER66C	LTR/ERV1	(67)	488	2	663823
529	9.1	0.0	0.3	chr11	63534736	63534826	(71551796)	C	MER21C	LTR/ERVL	(746)	192	123	663827
626	29.8	6.0	6.8	chr11	63582190	63582629	(71503993)	+	HAL1	LINE/L1	1685	2120	(387)	663926
2282	9.7	0.3	0.0	chr11	63582852	63583140	(71503482)	+	AluSg	SINE/Alu	2	291	(19)	663927
2159	10.5	2.1	0.3	chr11	63858367	63858652	(71227970)	C	AluSg	SINE/Alu	(19)	291	1	664552
367	18.8	13.2	6.1	chr11	63858653	63858755	(71227867)	+	Charlie1b	DNA/hAT-Charlie	403	518	(5)	664551
342	31.1	5.7	3.3	chr11	64240188	64240340	(70846282)	C	MIRb	SINE/MIR	(6)	262	106	665244
931	13.4	0.0	0.0	chr11	64270649	64270782	(70815840)	+	FRAM	SINE/Alu	1	134	(42)	665282
37	0.0	0.0	0.0	chr11	64270901	64270932	(70815690)	+	(AC)n	Simple_repeat	1	32	(0)	665283
44	0.0	0.0	0.0	chr11	64270976	64271013	(70815609)	+	(AC)n	Simple_repeat	1	38	(0)	665283
570	6.7	15.0	4.5	chr11	64301276	64301397	(70785225)	C	AluJr	SINE/Alu	(0)	312	184	665346
282	24.5	8.9	2.9	chr11	64659868	64659972	(70426650)	+	L2b	LINE/L2	3263	3374	(1)	666001
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
332	31.3	6.2	8.0	chr11	65499662	65499925	(69586697)	+	L1M4c	LINE/L1	949	1207	(5177)	667663
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
22	24.2	1.9	6.5	chr11	65919124	65919228	(69167394)	+	G-rich	Low_complexity	1	107	(0)	668433
1047	27.1	22.4	2.9	chr11	65941215	65941618	(69145004)	C	L2	LINE/L2	(1210)	2209	1683	668492
583	25.9	15.6	1.1	chr11	65941612	65942000	(69144622)	C	L2a	LINE/L2	(134)	3292	2819	668495
13	31.5	0.0	3.2	chr11	65961813	65961874	(69124748)	+	(GGC)n	Simple_repeat	1	62	(0)	668549
12	29.2	4.7	3.4	chr11	65961917	65962001	(69124621)	+	(GCGGAA)n	Simple_repeat	1	89	(0)	668550
12	23.1	2.3	2.3	chr11	66052068	66052110	(69034512)	+	(GCCC)n	Simple_repeat	1	44	(0)	668735
13	22.7	0.0	0.0	chr11	66617063	66617098	(68469524)	+	G-rich	Low_complexity	1	36	(0)	669932
895	22.8	0.0	1.5	chr11	66839202	66839397	(68247225)	C	MIR	SINE/MIR	(34)	228	36	670364
18	21.9	0.0	0.0	chr11	66843351	66843393	(68243229)	+	G-rich	Low_complexity	1	43	(0)	670370
2417	6.0	0.0	3.3	chr11	66892566	66892867	(68193755)	+	AluSg4	SINE/Alu	2	293	(17)	670434
328	34.4	3.0	3.0	chr11	66935290	66935424	(68151198)	+	MamRTE1	LINE/RTE-BovB	3373	3507	(305)	670521
243	31.7	4.1	2.6	chr11	66935627	66935749	(68150873)	+	MIRb	SINE/MIR	25	145	(123)	670522
13	21.7	2.6	0.0	chr11	67391937	67391974	(67694648)	+	G-rich	Low_complexity	1	39	(0)	671565
212	24.9	0.0	0.0	chr11	67464155	67464220	(67622402)	+	MIR3	SINE/MIR	42	107	(123)	671687
839	24.5	8.5	4.8	chr11	67563568	67563790	(67522832)	+	LTR49-int	LTR/ERV1	1015	1176	(7868)	671889
4033	6.0	4.5	0.0	chr11	67563791	67564319	(67522303)	+	MER41A	LTR/ERV1	1	554	(0)	671891
8470	0.7	0.8	0.0	chr11	67603354	67604313	(67482309)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	671981
3437	13.6	4.7	1.7	chr11	67604314	67604346	(67482276)	C	LTR26	LTR/ERV1	(572)	31	4	671980
247	36.0	9.9	1.9	chr11	67604350	67604842	(67481780)	C	L2c	LINE/L2	(222)	3165	2544	671982
415	32.7	10.4	2.5	chr11	67605626	67605829	(67480793)	+	MIRc	SINE/MIR	9	230	(38)	671984
18	27.1	0.0	0.0	chr11	68004175	68004217	(67082405)	+	(GT)n	Simple_repeat	1	43	(0)	672599
480	25.9	6.7	5.1	chr11	68004250	68004424	(67082198)	+	MIR	SINE/MIR	49	226	(36)	672600
1441	20.0	12.6	5.9	chr11	68011104	68011560	(67075062)	C	LTR54B	LTR/ERV1	(4)	494	3	672617
30	12.0	4.5	2.9	chr11	68121277	68121343	(66965279)	+	(CGG)n	Simple_repeat	1	70	(0)	672798
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
2048	9.4	5.6	0.7	chr11	68257254	68257541	(66829081)	+	AluSq	SINE/Alu	1	303	(10)	673085
351	23.6	9.2	0.0	chr11	68257837	68257951	(66828671)	+	MIRb	SINE/MIR	46	172	(58)	673086
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
13	8.2	3.9	0.0	chr11	68460278	68460303	(66626319)	+	(CCCCG)n	Simple_repeat	1	27	(0)	673467
243	22.2	7.7	0.0	chr11	69295380	69295451	(65791171)	+	L2a	LINE/L2	3012	3089	(337)	674854
232	38.5	6.2	2.2	chr11	69444370	69444507	(65642115)	+	MIRb	SINE/MIR	116	259	(3)	675104
13	20.1	0.0	2.8	chr11	71448564	71448599	(63638023)	+	(GCCCC)n	Simple_repeat	1	36	(0)	678281
4505	4.9	1.4	0.0	chr11	71712877	71713426	(63373196)	+	LTR6B	LTR/ERV1	1	558	(0)	678662
242	27.9	5.2	1.7	chr11	72736811	72736928	(62349694)	C	MIR3	SINE/MIR	(125)	143	13	680492
20	7.2	0.0	0.0	chr11	73761139	73761168	(61325454)	+	(GCGT)n	Simple_repeat	1	30	(0)	682608
17	24.0	3.3	1.6	chr11	73761468	73761528	(61325094)	+	G-rich	Low_complexity	1	63	(0)	682609
462	24.6	7.6	1.6	chr11	73779051	73779174	(61307448)	+	MER94	DNA/hAT-Blackjack	1	132	(2)	682651
765	14.7	3.8	1.6	chr11	73784169	73784297	(61302325)	C	AluJo	SINE/Alu	(180)	132	1	682666
244	13.9	0.0	0.0	chr11	73784415	73784450	(61302172)	C	Alu	SINE/Alu	(97)	36	1	682667
314	26.6	3.1	2.1	chr11	73983760	73983855	(61102767)	C	MIRc	SINE/MIR	(90)	178	82	683166
591	27.7	13.0	2.9	chr11	74002921	74003130	(61083492)	+	MIRb	SINE/MIR	16	240	(28)	683205
511	29.2	2.2	1.1	chr11	74011592	74011752	(61074870)	C	MIRb	SINE/MIR	(5)	263	100	683223
2403	20.9	7.7	0.2	chr11	74086136	74086667	(60999955)	C	MER90	LTR/ERV1	(0)	575	1	683385
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
1053	13.3	7.5	0.1	chr11	74592208	74592434	(60494188)	+	MER44A	DNA/TcMar-Tigger	1	248	(91)	684428
338	26.2	13.5	4.1	chr11	74642948	74643149	(60443473)	+	MIRb	SINE/MIR	48	265	(3)	684525
239	30.8	13.1	0.8	chr11	75031344	75031611	(60055011)	+	L2	LINE/L2	2704	3009	(410)	685219
2457	6.9	0.0	0.0	chr11	75400878	75401180	(59685442)	C	AluY	SINE/Alu	(7)	304	2	685981
253	26.1	16.2	3.2	chr11	76184839	76184961	(58901661)	+	MIR3	SINE/MIR	60	201	(7)	687471
16	22.6	4.2	4.0	chr11	76235170	76235241	(58851381)	+	(CCCAGCT)n	Simple_repeat	1	75	(0)	687580
236	35.5	8.7	9.0	chr11	77302861	77303358	(57783264)	+	L2c	LINE/L2	2333	2828	(591)	689591
15	13.7	3.1	0.0	chr11	77474212	77474243	(57612379)	+	(CGG)n	Simple_repeat	1	33	(0)	689968
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
2841	15.1	4.3	1.7	chr11	77644667	77645185	(57441437)	C	LTR8	LTR/ERV1	(155)	536	4	690319
1074	17.0	2.7	3.7	chr11	77645190	77645377	(57441245)	C	AluJo	SINE/Alu	(125)	187	2	690320
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
1505	12.2	3.6	2.7	chr11	86145966	86146187	(48940435)	+	AluSx	SINE/Alu	1	224	(88)	705018
230	29.9	8.7	1.4	chr11	86183105	86183243	(48903379)	C	L2c	LINE/L2	(223)	3164	3015	705100
4190	6.2	0.2	0.2	chr11	86358409	86358929	(48727693)	C	MER41C	LTR/ERV1	(0)	521	1	705435
582	30.4	13.8	6.5	chr11	86742274	86742917	(48343705)	C	LTR78	LTR/ERV1	(581)	723	26	706038
359	16.2	9.2	4.8	chr11	86937190	86937293	(48149329)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	59	706349
4277	5.8	3.2	0.0	chr11	86937365	86937900	(48148722)	+	MER41A	LTR/ERV1	1	554	(0)	706350
326	32.2	4.3	3.7	chr11	91791245	91791269	(43295353)	C	MER103C	DNA/hAT-Charlie	(109)	188	165	713234
2767	19.8	3.6	1.9	chr11	91791270	91791860	(43294762)	C	MER6A	DNA/TcMar-Tigger	(2)	603	2	713235
2785	17.1	3.3	8.2	chr11	91822795	91823488	(43263134)	C	LTR8	LTR/ERV1	(0)	727	1	713282
3157	22.9	0.5	1.8	chr11	91904543	91905197	(43181425)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	9	713408
24	20.3	2.0	0.0	chr11	93197514	93197564	(41889058)	+	(CA)n	Simple_repeat	1	52	(0)	715243
23803	7.3	1.3	0.6	chr11	93439099	93445217	(41641405)	C	L1PA6	LINE/L1	(2)	6325	178	715582
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
12	20.9	5.0	0.0	chr11	93718526	93718565	(41368057)	+	(TCTTACT)n	Simple_repeat	1	42	(0)	716039
202	24.1	19.4	4.4	chr11	94732680	94732770	(40353852)	C	MamRTE1	LINE/RTE-BovB	(329)	3483	3376	717588
400	28.3	1.2	9.8	chr11	94755407	94755590	(40331032)	C	L3	LINE/CR1	(103)	3996	3829	717633
702	20.3	5.5	3.2	chr11	94755591	94755611	(40331011)	C	MER112	DNA/hAT-Charlie	(5)	256	238	717634
5170	11.5	4.1	0.5	chr11	94755612	94756381	(40330241)	C	LTR1A1	LTR/ERV1	(0)	799	1	717635
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
2645	17.0	2.2	0.0	chr11	95415952	95416398	(39670224)	+	LTR32	LTR/ERVL	1	457	(0)	718600
1975	16.1	0.9	0.3	chr11	95506075	95506404	(39580218)	+	MER44B	DNA/TcMar-Tigger	17	348	(202)	718731
860	12.2	1.3	2.0	chr11	95506396	95506545	(39580077)	+	Tigger7	DNA/TcMar-Tigger	2343	2491	(0)	718732
295	9.5	0.0	0.0	chr11	96212472	96212513	(38874109)	C	MADE1	DNA/TcMar-Mariner	(38)	42	1	719809
383	19.9	13.0	5.3	chr11	96255682	96255851	(38830771)	+	MLT1L	LTR/ERVL-MaLR	350	534	(76)	719876
2374	8.1	0.0	0.0	chr11	96255866	96256173	(38830449)	C	AluSq2	SINE/Alu	(0)	313	1	719877
1971	23.2	3.4	0.6	chr11	96318902	96319440	(38767182)	+	MLT1F1	LTR/ERVL-MaLR	1	563	(6)	719970
924	26.6	13.0	3.2	chr11	96330521	96330989	(38755633)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	3	719993
1448	22.4	11.1	6.1	chr11	97963447	97964133	(37122489)	C	MER61E	LTR/ERV1	(2)	777	1	721865
1432	23.5	7.1	7.4	chr11	97973243	97973850	(37112772)	C	MER61E	LTR/ERV1	(29)	616	7	721869
4626	9.9	0.9	0.0	chr11	101014749	101015376	(34071246)	+	MER41B	LTR/ERV1	1	634	(0)	725839
40	4.9	0.0	0.0	chr11	102317589	102317631	(32768991)	+	(GT)n	Simple_repeat	1	43	(0)	727750
2525	13.3	16.9	5.2	chr11	102620813	102621350	(32465272)	C	LTR18B	LTR/ERVL	(0)	614	1	728234
429	26.6	13.9	2.8	chr11	102621386	102621563	(32465059)	+	MIRc	SINE/MIR	41	241	(27)	728235
357	29.9	0.0	4.2	chr11	106022717	106022839	(29063783)	+	L2a	LINE/L2	1961	2078	(1341)	732991
3073	16.3	3.5	8.5	chr11	110075306	110076034	(25010588)	C	LTR8	LTR/ERV1	(0)	691	1	739233
742	28.8	4.0	0.0	chr11	110097509	110097723	(24988899)	C	MIR	SINE/MIR	(16)	246	23	739269
6969	11.8	7.0	0.6	chr11	110097734	110098885	(24987737)	+	Tigger3b	DNA/TcMar-Tigger	1	1231	(0)	739270
4176	12.5	1.3	4.9	chr11	110337469	110338054	(24748568)	C	MER41B	LTR/ERV1	(71)	563	1	739658
882	23.4	9.5	9.3	chr11	110338055	110338352	(24748270)	+	L1MEc	LINE/L1	1976	2282	(4133)	739655
16	17.8	7.2	4.0	chr11	111871300	111871377	(23215245)	+	(CGCCG)n	Simple_repeat	1	80	(0)	742108
333	31.6	13.3	5.7	chr11	112097710	112097971	(22988651)	C	L2c	LINE/L2	(0)	3387	3103	742521
374	37.0	12.0	3.0	chr11	112098071	112098119	(22988503)	C	L2c	LINE/L2	(491)	2928	2884	742521
391	26.8	1.0	0.0	chr11	113594035	113594131	(21492491)	+	MLT1N2	LTR/ERVL-MaLR	465	562	(0)	744831
2245	28.5	2.2	0.0	chr11	113663193	113663684	(21422938)	+	FordPrefect	DNA/hAT-Tip100	100	602	(1081)	744948
2735	14.7	9.7	0.2	chr11	113665122	113665578	(21421044)	+	LTR10B	LTR/ERV1	1	505	(0)	744952
3936	16.4	1.8	2.2	chr11	113665579	113666137	(21420485)	C	L1MB7	LINE/L1	(154)	6528	5967	744950
3340	12.3	3.6	1.7	chr11	114294851	114295386	(20791236)	C	LTR35A	LTR/ERV1	(0)	547	1	746037
61	0.0	0.0	0.0	chr11	118240733	118240784	(16845838)	+	(AC)n	Simple_repeat	1	52	(0)	752547
720	27.0	6.3	5.6	chr11	118241374	118241624	(16844998)	+	MIR	SINE/MIR	2	254	(8)	752548
14	15.2	0.0	7.1	chr11	118338964	118339005	(16747617)	+	GA-rich	Low_complexity	1	42	(0)	752736
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
14	15.3	0.0	0.0	chr11	118573583	118573611	(16513011)	+	(TGTTC)n	Simple_repeat	1	29	(0)	753163
1330	32.0	7.0	2.2	chr11	118708097	118708420	(16378202)	C	ERVL-E-int	LTR/ERVL	(568)	5099	4760	753404
2985	11.9	4.9	0.4	chr11	118708421	118708884	(16377738)	+	LTR19A	LTR/ERV1	1	486	(0)	753406
28	0.0	0.0	0.0	chr11	119018676	119018701	(16067921)	+	(GGA)n	Simple_repeat	1	26	(0)	754099
17	20.8	5.2	1.6	chr11	119057209	119057266	(16029356)	+	(GCCCG)n	Simple_repeat	1	61	(0)	754173
370	28.6	12.5	0.0	chr11	119087440	119087593	(15999029)	C	MIR3	SINE/MIR	(3)	205	30	754236
12	22.5	2.3	2.3	chr11	119318514	119318556	(15768066)	+	G-rich	Low_complexity	1	44	(0)	754673
13	16.0	0.0	3.2	chr11	119364270	119364300	(15722322)	+	(GCCCC)n	Simple_repeat	1	31	(0)	754747
340	27.4	3.8	3.8	chr11	119364559	119364691	(15721931)	C	Charlie4z	DNA/hAT-Charlie	(6)	161	29	754748
2322	9.6	0.0	0.0	chr11	124097604	124097895	(10988727)	+	AluSq2	SINE/Alu	1	292	(21)	762544
567	26.9	7.7	0.6	chr11	125273637	125273793	(9812829)	+	MIR3	SINE/MIR	33	201	(7)	764249
2461	18.9	3.0	0.2	chr11	125551738	125552166	(9534456)	+	LTR8	LTR/ERV1	1	441	(250)	764725
6271	9.9	1.8	1.3	chr11	125552167	125553314	(9533308)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	1769	764722
14	18.3	2.0	6.0	chr11	126345984	126346032	(8740590)	+	(CTC)n	Simple_repeat	1	50	(0)	765950
572	28.7	9.2	3.1	chr11	134272591	134272784	(813838)	+	MIR	SINE/MIR	53	259	(3)	777026
371	30.0	3.2	1.3	chr11	134727255	134727406	(359216)	+	MIRb	SINE/MIR	36	190	(78)	777582
21	16.4	0.0	0.0	chr12	389549	389590	(132885719)	+	(CGAGG)n	Simple_repeat	1	42	(0)	778653
20	27.6	0.0	0.0	chr12	389591	389606	(132885703)	+	(CGGCG)n	Simple_repeat	4	61	(0)	778654
2172	11.7	0.0	0.0	chr12	406665	406947	(132868362)	+	AluSx	SINE/Alu	1	283	(29)	778692
1146	28.5	4.5	20.1	chr12	406948	406997	(132868312)	C	L2a	LINE/L2	(657)	2762	2713	778690
263	30.4	0.7	9.2	chr12	406998	407025	(132868284)	C	SVA_A	Retroposon/SVA	(1038)	349	241	778693
625	22.8	0.8	0.0	chr12	407026	407152	(132868157)	+	FLAM_C	SINE/Alu	2	129	(14)	778694
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
45	25.6	3.8	4.5	chr12	991143	991354	(132283955)	+	(CGG)n	Simple_repeat	1	220	(0)	779868
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
17	15.7	0.0	2.6	chr12	1691119	1691157	(131584152)	+	(CCCCCTC)n	Simple_repeat	1	39	(0)	781101
19	13.8	6.0	1.9	chr12	4269331	4269380	(129005929)	+	(CCG)n	Simple_repeat	1	53	(0)	785266
3066	11.0	1.4	0.7	chr12	4762776	4763204	(128512105)	C	MER57A1	LTR/ERV1	(0)	432	1	786038
18	0.0	0.0	0.0	chr12	6345436	6345455	(126929854)	+	(CA)n	Simple_repeat	1	20	(0)	788519
227	26.6	0.0	6.0	chr12	6345457	6345540	(126929769)	+	MIRc	SINE/MIR	12	91	(177)	788520
231	28.1	2.4	3.5	chr12	6904453	6904537	(126370772)	C	MIRc	SINE/MIR	(182)	86	3	789621
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
1822	13.7	8.9	4.4	chr12	6944852	6945194	(126330115)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	1	789679
773	29.6	8.9	7.3	chr12	7057937	7058316	(126216993)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	151	789879
5345	11.6	5.2	0.3	chr12	7058317	7059095	(126216214)	+	LTR8B	LTR/ERV1	1	820	(0)	789880
13	16.7	7.5	0.0	chr12	7369513	7369552	(125905757)	+	(CAGCCA)n	Simple_repeat	1	43	(0)	790311
220	37.1	5.0	2.2	chr12	9763005	9763139	(123512170)	+	MIRb	SINE/MIR	120	258	(10)	794280
2245	7.3	3.0	0.0	chr12	10211957	10212242	(123063067)	C	AluSp	SINE/Alu	(17)	296	2	794931
918	23.6	16.8	5.8	chr12	11348384	11348592	(121926717)	+	MLT1D	LTR/ERVL-MaLR	1	207	(298)	796360
50	5.4	0.0	0.0	chr12	11348593	11348651	(121926658)	+	(GTGAC)n	Simple_repeat	1	59	(0)	796361
918	23.6	16.8	5.8	chr12	11348652	11348887	(121926422)	+	MLT1D	LTR/ERVL-MaLR	208	505	(0)	796360
824	26.6	0.9	3.4	chr12	13288712	13288948	(119986361)	+	MIR	SINE/MIR	12	242	(20)	799634
225	34.7	0.0	0.0	chr12	14568492	14568563	(118706746)	C	L2c	LINE/L2	(1)	3386	3315	801566
2495	4.9	0.7	0.0	chr12	14568598	14568884	(118706425)	+	AluY	SINE/Alu	2	290	(21)	801567
15	4.8	0.0	0.0	chr12	14568885	14568906	(118706403)	+	(TAA)n	Simple_repeat	1	22	(0)	801568
2431	4.0	0.0	8.9	chr12	15348477	15348800	(117926509)	+	AluYe5	SINE/Alu	1	295	(15)	802657
1505	26.3	9.3	9.0	chr12	15348801	15348965	(117926344)	+	MLT1E2	LTR/ERVL-MaLR	438	627	(0)	802656
16	13.7	0.0	0.0	chr12	19220191	19220215	(114055094)	+	(T)n	Simple_repeat	1	25	(0)	807730
31	16.6	1.4	1.4	chr12	19439369	19439437	(113835872)	+	G-rich	Low_complexity	1	70	(0)	808198
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
3904	15.4	1.2	7.3	chr12	21233930	21234666	(112040643)	C	LTR8	LTR/ERV1	(0)	691	1	810537
3595	23.3	1.4	2.0	chr12	21234667	21236057	(112039252)	C	L1PA17	LINE/L1	(3123)	3726	2346	810542
14	20.5	2.6	0.0	chr12	22625288	22625326	(110649983)	+	(CCGC)n	Simple_repeat	1	40	(0)	812441
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
2140	15.9	1.8	1.0	chr12	25614724	25615110	(107660199)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	816727
484	15.8	0.0	0.0	chr12	25692654	25692735	(107582574)	C	MER5A	DNA/hAT-Charlie	(1)	188	107	816834
926	31.4	5.1	2.2	chr12	26319024	26319518	(106955791)	+	L1ME4a	LINE/L1	5598	6107	(17)	817797
4688	10.3	0.2	0.0	chr12	26456046	26456676	(106818633)	+	MER41B	LTR/ERV1	3	634	(0)	817994
562	30.5	8.7	9.6	chr12	26697105	26697526	(106577783)	+	L1M6	LINE/L1	663	1086	(5410)	818335
421	16.1	6.5	0.0	chr12	27425410	27425496	(105849813)	C	MLT1J2	LTR/ERVL-MaLR	(9)	439	347	819527
473	32.2	5.7	3.9	chr12	27425544	27425750	(105849559)	C	MLT1K	LTR/ERVL-MaLR	(160)	435	225	819528
1773	14.5	10.9	2.9	chr12	27818310	27818821	(105456488)	C	LTR18B	LTR/ERVL	(6)	608	2	820201
3715	8.3	4.5	0.0	chr12	28000802	28001330	(105273979)	C	MER41A	LTR/ERV1	(0)	554	1	820458
754	21.8	11.3	2.5	chr12	28130452	28130653	(105144656)	C	MIR	SINE/MIR	(11)	251	30	820652
234	38.2	4.0	2.0	chr12	28130826	28131020	(105144289)	+	OldhAT1	DNA/hAT-Ac	1188	1386	(1462)	820653
5138	15.9	2.0	3.4	chr12	28242099	28242687	(105032622)	C	MER54A	LTR/ERVL	(0)	901	329	820800
2506	12.3	3.0	4.2	chr12	28242688	28243120	(105032189)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	820801
13	11.1	0.0	6.1	chr12	31326451	31326483	(101948826)	+	GA-rich	Low_complexity	1	33	(0)	825005
183	28.2	4.9	8.2	chr12	31618117	31618201	(101657108)	+	MIR	SINE/MIR	169	250	(12)	825637
1905	18.6	6.1	9.8	chr12	31618246	31618390	(101656919)	+	LTR54	LTR/ERV1	1	147	(363)	825642
3758	13.3	2.7	0.0	chr12	31618391	31618969	(101656340)	C	MER41E	LTR/ERV1	(0)	595	1	825643
4527	8.9	6.1	2.7	chr12	31733786	31734288	(101541021)	C	LTR8	LTR/ERV1	(166)	525	1	825921
872	32.1	7.2	4.1	chr12	31734289	31734503	(101540806)	C	LTR33	LTR/ERVL	(260)	255	33	825920
3942	11.7	3.2	2.0	chr12	31832619	31833230	(101442079)	C	LTR77	LTR/ERV1	(2)	620	1	826161
1358	24.3	7.8	4.0	chr12	31896930	31897233	(101378076)	+	HAL1	LINE/L1	986	1296	(1211)	826308
524	37.8	3.7	1.2	chr12	32003280	32003619	(101271690)	+	ERVL-E-int	LTR/ERVL	4369	4717	(950)	826549
1862	16.6	1.6	0.7	chr12	32003620	32003927	(101271382)	C	AluJb	SINE/Alu	(1)	311	1	826553
4308	12.8	0.3	0.5	chr12	32021013	32021530	(101253779)	C	MER41B	LTR/ERV1	(117)	517	2	826606
2657	17.6	4.7	11.4	chr12	32021531	32021598	(101253711)	C	MER67C	LTR/ERV1	(328)	383	363	826605
1879	17.2	0.7	1.6	chr12	32021599	32021911	(101253398)	C	AluJr	SINE/Alu	(2)	310	1	826608
1028	21.4	0.8	4.2	chr12	32031146	32031404	(101243905)	C	LTR16C	LTR/ERVL	(9)	480	231	826632
4108	9.0	6.9	2.6	chr12	32946664	32947269	(100328040)	+	MER41B	LTR/ERV1	1	634	(0)	828412
410	23.3	5.0	9.5	chr12	42098283	42098429	(91176880)	+	MIR	SINE/MIR	123	262	(0)	835992
23	3.7	0.0	0.0	chr12	43758666	43758693	(89516616)	+	(CA)n	Simple_repeat	1	28	(0)	838504
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
3651	9.9	7.4	0.4	chr12	46257833	46258347	(87016962)	C	MER41A	LTR/ERV1	(0)	554	1	842028
1650	15.0	1.2	7.0	chr12	46258348	46258653	(87016656)	C	Tigger4b	DNA/TcMar-Tigger	(37)	324	34	842027
4245	7.1	1.4	0.2	chr12	46475861	46476407	(86798902)	C	MER41A	LTR/ERV1	(0)	554	1	842339
418	31.8	3.7	6.5	chr12	46476408	46476473	(86798836)	C	L1M5	LINE/L1	(1143)	5003	4934	842338
617	13.0	0.0	0.0	chr12	46549847	46549938	(86725371)	C	MER44B	DNA/TcMar-Tigger	(22)	528	437	842423
973	16.1	3.0	0.0	chr12	46549955	46550115	(86725194)	C	MER44B	DNA/TcMar-Tigger	(350)	200	35	842423
404	31.5	8.5	7.8	chr12	46558063	46558565	(86716744)	+	LTR85b	LTR/Gypsy?	226	732	(52)	842436
2384	10.7	0.7	0.0	chr12	47215773	47216080	(86059229)	+	AluSq	SINE/Alu	1	310	(3)	843296
229	38.2	0.0	0.0	chr12	47377479	47377546	(85897763)	C	MIRb	SINE/MIR	(39)	229	162	843624
425	29.4	8.0	1.8	chr12	47834111	47834336	(85440973)	C	MIR	SINE/MIR	(0)	268	18	844275
355	26.9	10.3	1.5	chr12	47834412	47834543	(85440766)	C	MIRb	SINE/MIR	(122)	146	2	844275
2146	11.8	0.3	0.3	chr12	47871459	47871764	(85403545)	C	AluSz	SINE/Alu	(6)	306	1	844348
324	33.0	11.6	2.9	chr12	47871766	47872111	(85403198)	+	L1ME4b	LINE/L1	506	885	(7)	844345
16	18.1	4.9	3.1	chr12	48235765	48235820	(85039489)	+	(AATAT)n	Simple_repeat	1	57	(0)	844923
2971	16.1	6.4	11.4	chr12	48235821	48236550	(85038759)	+	LTR8	LTR/ERV1	1	691	(0)	844924
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
191	33.1	14.5	3.0	chr12	49698758	49698891	(83576418)	C	MIR1_Amn	SINE/MIR	(78)	152	1	847630
1892	18.5	0.0	0.0	chr12	50563185	50563486	(82711823)	C	AluJb	SINE/Alu	(10)	302	1	849519
23	8.8	0.0	0.0	chr12	50764042	50764077	(82511232)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	849956
41	0.0	0.0	0.0	chr12	51246605	51246639	(82028670)	+	(TG)n	Simple_repeat	1	35	(0)	850926
2461	8.4	0.0	0.0	chr12	51311774	51312071	(81963238)	C	AluSx	SINE/Alu	(14)	298	1	851094
1042	17.3	1.8	6.7	chr12	51312072	51312094	(81963215)	+	L1MC5	LINE/L1	9091	9110	(194)	851090
2722	12.4	1.4	2.2	chr12	51312095	51312540	(81962769)	+	MER65A	LTR/ERV1	1	442	(3)	851095
387	32.0	2.0	3.2	chr12	51905704	51905858	(81369451)	C	Tigger19b	DNA/TcMar-Tigger	(7)	543	391	852120
14	16.4	2.9	0.0	chr12	52033165	52033198	(81242111)	+	(CCCCG)n	Simple_repeat	1	35	(0)	852344
16	21.9	4.7	0.0	chr12	52037162	52037204	(81238105)	+	(GC)n	Simple_repeat	1	45	(0)	852349
2293	6.6	2.0	0.3	chr12	52948488	52948789	(80326520)	C	AluSc	SINE/Alu	(2)	307	1	853734
2261	9.4	0.3	0.7	chr12	53298855	53299152	(79976157)	+	AluSx	SINE/Alu	2	298	(14)	854433
187	32.1	7.9	5.4	chr12	53324658	53324805	(79950504)	+	L2b	LINE/L2	3217	3368	(7)	854489
14	18.2	0.0	0.0	chr12	53452109	53452139	(79823170)	+	(CAG)n	Simple_repeat	1	31	(0)	854795
230	25.2	12.8	8.2	chr12	54298156	54298231	(78977078)	+	MIRc	SINE/MIR	12	83	(185)	856196
2396	9.0	0.3	0.0	chr12	54298232	54298530	(78976779)	+	AluSp	SINE/Alu	7	306	(7)	856197
879	2.8	0.0	0.0	chr12	54932525	54932632	(78342677)	C	LTR7B	LTR/ERV1	(356)	108	1	857136
313	22.2	0.0	2.7	chr12	54932633	54932706	(78342603)	C	HERVH-int	LTR/ERV1	(0)	7713	7642	857136
1426	13.7	3.3	1.3	chr12	54932720	54932956	(78342353)	C	MER61A	LTR/ERV1	(99)	242	1	857137
728	27.7	8.0	0.3	chr12	55659400	55659689	(77615620)	C	L4_A_Mam	LINE/RTE-X	(53)	4937	4624	858008
16	14.5	0.0	6.8	chr12	55729014	55729057	(77546252)	+	(GCCCC)n	Simple_repeat	1	44	(0)	858131
13	19.5	8.3	1.5	chr12	55829559	55829618	(77445691)	+	(CTCCCGG)n	Simple_repeat	1	65	(0)	858322
18	22.4	1.3	6.5	chr12	55829619	55829629	(77445680)	+	(CCGCCT)n	Simple_repeat	6	77	(0)	858323
15	5.6	0.0	0.0	chr12	55830816	55830834	(77444475)	+	(CG)n	Simple_repeat	1	19	(0)	858324
22	15.1	0.0	0.0	chr12	55830834	55830870	(77444439)	+	(CA)n	Simple_repeat	1	37	(0)	858325
13	13.2	0.0	0.0	chr12	55974045	55974069	(77301240)	+	(GAG)n	Simple_repeat	1	25	(0)	858642
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
13	23.1	0.0	0.0	chr12	56152593	56152628	(77122681)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	858986
15	0.0	0.0	4.3	chr12	56266850	56266872	(77008437)	+	(CCTT)n	Simple_repeat	1	23	(0)	859192
874	24.3	3.9	6.3	chr12	56336489	56336683	(76938626)	+	MIR	SINE/MIR	66	262	(0)	859328
1829	19.9	4.2	9.1	chr12	56932050	56932574	(76342735)	+	MLT1D	LTR/ERVL-MaLR	2	499	(6)	860491
37	0.0	0.0	0.0	chr12	57112147	57112178	(76163131)	+	(AC)n	Simple_repeat	1	32	(0)	860716
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
707	25.7	9.3	0.0	chr12	57112615	57112828	(76162481)	+	MIR	SINE/MIR	1	236	(26)	860718
3035	12.9	8.2	0.0	chr12	57377196	57377690	(75897619)	+	LTR45C	LTR/ERV1	1	539	(0)	861160
15	19.9	3.6	3.5	chr12	57430880	57430934	(75844375)	+	G-rich	Low_complexity	1	57	(0)	861302
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	31.2	0.0	0.0	chr12	57431186	57431196	(75844113)	+	(CGCA)n	Simple_repeat	1	54	(0)	861304
1018	19.7	3.1	3.1	chr12	57457813	57458037	(75817272)	+	Charlie1	DNA/hAT-Charlie	1	225	(2556)	861362
467	19.0	7.6	0.8	chr12	57458044	57458110	(75817199)	+	Charlie1a	DNA/hAT-Charlie	1325	1393	(62)	861363
2401	7.2	0.0	0.0	chr12	57458111	57458400	(75816909)	C	AluSx	SINE/Alu	(17)	295	6	861364
194	28.0	2.6	10.7	chr12	57522175	57522258	(75753051)	+	MIR3	SINE/MIR	90	166	(42)	861462
11	34.6	2.9	0.0	chr12	57547085	57547153	(75728156)	+	G-rich	Low_complexity	1	71	(0)	861491
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
2731	31.7	10.6	4.6	chr12	65666925	65667258	(67608051)	+	L2b	LINE/L2	2867	3271	(155)	873139
2207	14.2	9.3	0.2	chr12	66164195	66164603	(67110706)	C	LTR47A	LTR/ERVL	(2)	450	1	873912
5860	15.7	4.5	1.6	chr12	66164604	66165418	(67109891)	+	L1MB2	LINE/L1	4002	4843	(1297)	873911
893	16.4	1.9	0.6	chr12	68351935	68352093	(64923216)	+	MLT1A0	LTR/ERVL-MaLR	1	161	(204)	877220
670	14.3	1.9	0.9	chr12	68352094	68352199	(64923110)	+	MER41-int	LTR/ERV1	5840	5946	(0)	877221
3886	10.1	2.7	1.1	chr12	68352200	68352738	(64922571)	+	MER41B	LTR/ERV1	1	548	(86)	877221
690	27.3	8.2	3.6	chr12	68380938	68381278	(64894031)	C	MLT1L	LTR/ERVL-MaLR	(69)	541	75	877269
21	20.5	5.5	4.2	chr12	68610765	68610855	(64664454)	+	(CCCGC)n	Simple_repeat	1	96	(0)	877715
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
3977	12.0	1.1	0.0	chr12	70090836	70091394	(63183915)	C	MER61E	LTR/ERV1	(4)	565	1	880366
2069	12.9	0.0	1.1	chr12	70658884	70659202	(62616107)	C	AluSz	SINE/Alu	(0)	312	1	881249
306	28.3	11.7	4.2	chr12	70659350	70659585	(62615724)	C	L2	LINE/L2	(723)	2696	2441	881250
420	35.5	3.4	1.1	chr12	71299829	71300002	(61975307)	+	L3	LINE/CR1	3889	4066	(33)	882112
426	31.3	10.7	2.5	chr12	75683824	75684062	(57591247)	C	MIR	SINE/MIR	(0)	262	2	887914
4424	6.7	0.0	0.0	chr12	75684079	75684632	(57590677)	+	MER41A	LTR/ERV1	1	554	(0)	887915
15	12.0	7.3	1.4	chr12	75725052	75725086	(57550223)	+	GA-rich	Low_complexity	1	37	(0)	887981
2259	12.1	0.3	1.3	chr12	76193753	76194067	(57081242)	C	AluSx	SINE/Alu	(0)	312	1	888824
1574	22.9	2.8	9.1	chr12	76194068	76194123	(57081186)	+	MLT1C	LTR/ERVL-MaLR	410	455	(12)	888823
2726	21.4	0.7	3.4	chr12	76194124	76194679	(57080630)	+	MER87	LTR/ERV1	1	541	(0)	888825
4507	11.7	0.9	0.3	chr12	76303737	76304365	(56970944)	C	MER41B	LTR/ERV1	(0)	634	2	889041
233	30.5	12.8	0.0	chr12	76304367	76304461	(56970848)	+	L2a	LINE/L2	3048	3156	(270)	889033
670	29.1	10.2	6.1	chr12	76304538	76305013	(56970296)	+	MLT1J	LTR/ERVL-MaLR	8	505	(7)	889042
424	30.5	4.3	2.5	chr12	89116880	89117037	(44158272)	+	MIR	SINE/MIR	80	240	(22)	906501
455	29.8	5.4	8.2	chr12	89235838	89236104	(44039205)	+	L2c	LINE/L2	3129	3387	(0)	906675
264	27.3	4.9	0.0	chr12	89236147	89236223	(44039086)	C	L2a	LINE/L2	(8)	3418	3338	906680
2514	6.7	0.0	0.0	chr12	89375353	89375651	(43899658)	C	AluSc	SINE/Alu	(10)	299	1	906916
202	16.2	2.6	0.0	chr12	89393967	89394003	(43881306)	C	MIRb	SINE/MIR	(119)	149	112	906946
290	31.8	0.9	5.2	chr12	89394004	89394119	(43881190)	C	L2c	LINE/L2	(43)	3344	3234	906947
364	24.7	6.1	0.0	chr12	89394137	89394229	(43881080)	C	MER96B	DNA/hAT-Tip100	(1)	416	318	906948
970	19.8	4.5	7.2	chr12	89394200	89394370	(43880939)	+	MER96B	DNA/hAT-Tip100	130	308	(109)	906949
315	11.1	0.0	1.8	chr12	91287816	91287870	(41987439)	+	L1M4c	LINE/L1	4084	4137	(2245)	909750
1271	6.5	0.0	0.0	chr12	91679518	91679672	(41595637)	C	AluYc	SINE/Alu	(1)	298	144	910275
2274	9.6	0.0	2.2	chr12	93372812	93373124	(39902185)	+	AluSq2	SINE/Alu	1	306	(7)	913314
14	15.9	0.0	0.0	chr12	93441980	93442007	(39833302)	+	(GCC)n	Simple_repeat	1	28	(0)	913433
1297	17.8	0.9	0.4	chr12	93743329	93743553	(39531756)	C	AluJb	SINE/Alu	(9)	303	78	914055
719	29.7	0.6	0.0	chr12	93772968	93773149	(39502160)	+	MIRb	SINE/MIR	25	207	(61)	914095
934	28.4	12.1	4.3	chr12	93773167	93773228	(39502081)	C	MLT1J2	LTR/ERVL-MaLR	(6)	442	380	914096
1955	13.8	8.5	0.9	chr12	93773229	93773564	(39501745)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	914097
2269	8.7	2.1	0.0	chr12	93898418	93898703	(39376606)	+	AluSz	SINE/Alu	1	292	(20)	914303
4703	14.3	0.5	6.6	chr12	93898704	93899333	(39375976)	+	LTR39	LTR/ERV1	168	783	(0)	914302
641	22.2	11.5	4.6	chr12	93912178	93912371	(39362938)	+	MIRb	SINE/MIR	49	257	(11)	914334
872	33.3	4.4	0.8	chr12	94089748	94090116	(39185193)	+	MLT1J	LTR/ERVL-MaLR	130	512	(0)	914644
13	0.0	0.0	0.0	chr12	94459808	94459824	(38815485)	+	(GGC)n	Simple_repeat	1	17	(0)	915224
12	19.3	8.5	0.0	chr12	94460065	94460111	(38815198)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	915225
4510	12.2	0.2	0.2	chr12	96083136	96083769	(37191540)	+	MER41B	LTR/ERV1	1	634	(0)	918401
438	34.0	13.1	8.1	chr12	98439441	98440109	(34835200)	C	LTR78B	LTR/ERV1	(601)	695	2	922210
14	21.4	2.2	2.2	chr12	100267187	100267231	(33008078)	+	(CCCCT)n	Simple_repeat	1	46	(0)	925231
14	0.0	8.3	0.0	chr12	102062252	102062275	(31213034)	+	(AACAA)n	Simple_repeat	1	26	(0)	928502
2272	11.3	0.3	0.0	chr12	103804771	103805072	(29470237)	+	AluSq	SINE/Alu	2	304	(9)	931325
565	27.7	13.4	7.7	chr12	103805073	103805277	(29470032)	+	HAL1	LINE/L1	2115	2338	(169)	931324
189	16.1	0.0	0.0	chr12	104456707	104456737	(28818572)	C	MER131	DNA?	(150)	65	35	932617
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
23	28.5	1.3	0.0	chr12	106774607	106774682	(26500627)	+	GA-rich	Low_complexity	1	77	(0)	936818
2322	26.4	7.8	3.7	chr12	107032863	107033878	(26241431)	+	L1MEd	LINE/L1	3083	4143	(2003)	937287
769	16.3	19.5	2.1	chr12	107033882	107033941	(26241368)	+	Tigger4a	DNA/TcMar-Tigger	1	74	(162)	937292
3638	15.7	1.7	2.2	chr12	107033942	107034578	(26240731)	+	MER41B	LTR/ERV1	1	634	(0)	937293
793	25.1	8.6	5.7	chr12	107593616	107594070	(25681239)	C	MLT1J	LTR/ERVL-MaLR	(0)	448	3	938507
13	11.7	3.6	0.0	chr12	107761083	107761110	(25514199)	+	(CCCGG)n	Simple_repeat	1	29	(0)	938826
343	33.6	7.0	8.5	chr12	108337396	108337642	(24937667)	C	L2b	LINE/L2	(1)	3374	3132	940058
16	15.3	0.0	2.6	chr12	108515292	108515329	(24759980)	+	(GGAGCCG)n	Simple_repeat	1	38	(0)	940467
205	34.8	1.4	0.0	chr12	110048838	110048906	(23226403)	C	MIRb	SINE/MIR	(62)	206	137	943867
277	32.5	13.7	0.0	chr12	110050157	110050276	(23225033)	C	MIRc	SINE/MIR	(128)	140	2	943871
4489	6.3	0.2	0.2	chr12	110050344	110050896	(23224413)	+	MER41A	LTR/ERV1	1	553	(1)	943872
1385	32.0	4.0	10.8	chr12	110060237	110060753	(23214556)	+	L2	LINE/L2	1817	2353	(1066)	943900
290	19.6	19.3	1.1	chr12	110079899	110079991	(23195318)	C	MLT1O	LTR/ERVL-MaLR	(345)	197	84	943961
28	20.3	5.3	0.0	chr12	110080013	110080088	(23195221)	+	GA-rich	Low_complexity	1	80	(0)	943962
334	21.7	10.4	19.5	chr12	110080122	110080265	(23195044)	+	LTR16C	LTR/ERVL	223	343	(146)	943963
59	12.1	4.1	2.3	chr12	110124162	110124284	(23151025)	+	(GCCCC)n	Simple_repeat	1	128	(0)	944095
15	28.0	0.0	0.0	chr12	110124288	110124326	(23150983)	+	(GC)n	Simple_repeat	1	39	(0)	944096
4232	6.0	4.3	0.0	chr12	110271335	110271864	(23003445)	C	MER41A	LTR/ERV1	(0)	554	1	944394
255	29.8	0.0	0.0	chr12	110271866	110271922	(23003387)	C	L2a	LINE/L2	(95)	3331	3275	944395
204	22.0	6.5	14.5	chr12	110424745	110424861	(22850448)	+	L2c	LINE/L2	3278	3384	(3)	944702
398	30.3	3.6	11.9	chr12	110424916	110425052	(22850257)	+	MIRb	SINE/MIR	36	174	(94)	944703
2307	10.9	0.0	0.3	chr12	110425053	110425365	(22849944)	C	AluSx1	SINE/Alu	(0)	312	1	944704
912	27.9	11.8	1.0	chr12	111404082	111404565	(21870744)	+	L2a	LINE/L2	2832	3384	(42)	947027
475	28.4	4.1	2.1	chr12	111404740	111404883	(21870426)	C	MIRb	SINE/MIR	(22)	246	100	947028
307	35.9	8.1	4.5	chr12	111437861	111438219	(21837090)	C	L2b	LINE/L2	(0)	3375	3003	947103
267	20.0	5.0	0.0	chr12	111686339	111686414	(21588895)	C	MIR1_Amn	SINE/MIR	(80)	150	62	947658
1935	16.5	0.0	1.9	chr12	112116180	112116495	(21158814)	C	AluJo	SINE/Alu	(2)	310	1	948520
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
3303	14.0	2.0	0.4	chr12	112555858	112556387	(20718922)	+	LTR45C	LTR/ERV1	1	539	(0)	949531
432	19.3	10.9	2.6	chr12	112584448	112584564	(20690745)	C	MLT1O	LTR/ERVL-MaLR	(359)	183	56	949606
4506	10.6	3.2	0.0	chr12	112715713	112716325	(20558984)	C	MER41B	LTR/ERV1	(0)	634	2	949929
290	25.3	3.3	10.4	chr12	112716326	112716362	(20558947)	+	L2c	LINE/L2	3349	3387	(0)	949927
251	16.3	0.0	2.0	chr12	112716430	112716479	(20558830)	C	MLT1J	LTR/ERVL-MaLR	(48)	464	416	949930
2068	16.2	3.4	0.5	chr12	113231194	113231565	(20043744)	C	MLT1B	LTR/ERVL-MaLR	(7)	383	1	951123
4265	8.9	0.4	0.0	chr12	113583776	113584327	(19690982)	C	MER41A	LTR/ERV1	(0)	554	1	951949
274	33.2	16.0	7.4	chr12	113584328	113584669	(19690640)	+	L2a	LINE/L2	3035	3424	(2)	951948
13	21.7	0.0	2.6	chr12	113794999	113795037	(19480272)	+	G-rich	Low_complexity	1	39	(0)	952517
449	33.7	5.4	3.6	chr12	115204736	115205009	(18070300)	C	MER103C	DNA/hAT-Charlie	(1)	296	18	955520
1928	22.8	7.7	3.0	chr12	115205039	115205069	(18070240)	+	MLT1H	LTR/ERVL-MaLR	18	48	(501)	955521
4848	11.4	0.9	1.0	chr12	115205070	115205761	(18069548)	+	LTR8	LTR/ERV1	1	691	(0)	955522
2356	9.5	0.0	0.7	chr12	116336452	116336755	(16938554)	+	AluY	SINE/Alu	1	302	(9)	957774
48	4.1	0.0	0.0	chr12	116359284	116359333	(16915976)	+	(TG)n	Simple_repeat	1	50	(0)	957830
18	19.7	0.0	3.9	chr12	116455985	116456035	(16819274)	+	(TTCTTT)n	Simple_repeat	1	51	(0)	958098
939	35.3	5.0	1.5	chr12	116551987	116552504	(16722805)	+	L1ME5	LINE/L1	5616	6152	(42)	958358
4212	6.0	4.2	0.0	chr12	116556050	116556580	(16718729)	C	MER41A	LTR/ERV1	(0)	554	1	958367
1803	11.6	9.5	0.7	chr12	116558159	116558435	(16716874)	C	AluJo	SINE/Alu	(5)	307	4	958371
409	21.2	6.8	22.2	chr12	116558537	116558730	(16716579)	C	MIRb	SINE/MIR	(73)	195	34	958372
15	32.4	1.1	3.3	chr12	116819327	116819415	(16455894)	+	(GGCCCGG)n	Simple_repeat	1	90	(0)	959020
151	15.3	10.9	2.3	chr12	117128129	117128637	(16146672)	+	(CTGTCAC)n	Simple_repeat	2	552	(0)	959624
339	30.2	2.4	4.7	chr12	119665476	119665645	(13609664)	C	Helitron3Na_Mam	RC/Helitron	(88)	398	233	965288
14	19.2	4.8	0.0	chr12	119667740	119667781	(13607528)	+	(GCCTGG)n	Simple_repeat	1	44	(0)	965295
2244	10.2	1.7	0.0	chr12	120242604	120242897	(13032412)	+	AluSz	SINE/Alu	1	299	(13)	966506
667	15.8	0.9	1.5	chr12	120468262	120468288	(12807021)	+	AluJb	SINE/Alu	5	230	(72)	967151
349	31.5	5.4	2.4	chr12	121017741	121017995	(12257314)	C	MER65D	LTR/ERV1	(8)	437	187	968389
308	9.8	3.8	0.0	chr12	121018045	121018095	(12257214)	C	MER65D	LTR/ERV1	(476)	55	3	968389
1662	17.4	0.6	5.1	chr12	121018102	121018154	(12257155)	+	MLT1A0	LTR/ERVL-MaLR	48	100	(265)	968390
2296	12.0	11.8	2.7	chr12	121018155	121018523	(12256786)	C	MER48	LTR/ERV1	(0)	407	1	968391
1995	12.4	0.3	4.6	chr12	121143099	121143404	(12131905)	+	AluSx1	SINE/Alu	1	293	(19)	968675
1194	13.0	0.0	0.0	chr12	121143405	121143565	(12131744)	+	AluJb	SINE/Alu	134	294	(18)	968676
2324	9.2	0.3	0.7	chr12	121143568	121143862	(12131447)	+	AluSx1	SINE/Alu	1	294	(18)	968677
19	16.8	2.0	3.9	chr12	121352690	121352740	(11922569)	+	(GTT)n	Simple_repeat	1	52	(0)	969185
12	28.7	0.0	0.0	chr12	121580126	121580167	(11695142)	+	A-rich	Low_complexity	1	42	(0)	969720
2115	9.1	0.7	7.3	chr12	121659952	121660281	(11615028)	+	AluSq2	SINE/Alu	1	308	(5)	969967
382	27.5	1.4	2.8	chr12	121660282	121660311	(11614998)	+	L2a	LINE/L2	3374	3403	(23)	969955
2272	11.3	1.0	0.0	chr12	121660340	121660648	(11614661)	C	AluSx1	SINE/Alu	(0)	312	1	969968
2297	7.3	0.0	1.3	chr12	121687362	121687662	(11587647)	+	AluSq2	SINE/Alu	2	298	(15)	970062
17	26.2	0.0	6.5	chr12	121712666	121712742	(11562567)	+	G-rich	Low_complexity	1	77	(0)	970150
270	22.5	48.2	0.0	chr12	121717317	121717448	(11557861)	C	L2	LINE/L2	(508)	2911	2716	970158
527	24.1	14.7	0.0	chr12	121717446	121717590	(11557719)	C	MIR	SINE/MIR	(86)	176	7	970159
210	31.4	1.4	1.4	chr12	121748864	121748934	(11526375)	C	MIRb	SINE/MIR	(178)	90	20	970250
205	25.5	10.2	13.8	chr12	121933441	121933526	(11341783)	C	L2a	LINE/L2	(580)	2839	2748	970717
1931	15.1	0.0	3.3	chr12	121933527	121933831	(11341478)	+	AluJr	SINE/Alu	1	295	(17)	970718
1136	26.4	7.7	1.0	chr12	122064182	122064568	(11210741)	+	MLT1K	LTR/ERVL-MaLR	145	559	(36)	971015
16	23.9	2.9	4.2	chr12	122078733	122078801	(11196508)	+	(CGCCG)n	Simple_repeat	1	71	(0)	971060
1217	25.7	11.7	0.8	chr12	122333230	122333861	(10941448)	C	L2a	LINE/L2	(85)	3341	2609	971574
29	0.0	3.2	0.0	chr12	123584561	123584591	(9690718)	+	(GCG)n	Simple_repeat	1	32	(0)	974479
2229	16.9	5.5	1.8	chr12	123997319	123997758	(9277551)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	6	975281
1991	19.3	2.3	0.6	chr12	124026933	124027319	(9247990)	C	MLT2D	LTR/ERVL	(57)	498	1	975318
361	29.5	11.5	1.8	chr12	124027323	124027550	(9247759)	+	L2	LINE/L2	2501	2753	(666)	975319
2981	6.7	0.0	0.0	chr12	124630905	124631291	(8644018)	+	MER41A	LTR/ERV1	1	387	(167)	976442
5317	8.3	1.2	0.4	chr12	124636141	124636826	(8638483)	C	LTR8	LTR/ERV1	(0)	691	1	976454
16	19.5	5.3	3.3	chr12	124916598	124916654	(8358655)	+	GA-rich	Low_complexity	1	60	(0)	977140
620	22.1	4.4	0.0	chr12	125685106	125685236	(7590073)	C	MER74C	LTR/ERVL	(0)	460	324	978567
1238	20.4	2.8	1.1	chr12	125685544	125685821	(7589488)	C	MER74C	LTR/ERVL	(166)	294	12	978567
4014	10.0	0.5	0.0	chr12	126903073	126903623	(6371686)	C	MER41A	LTR/ERV1	(0)	554	1	980589
3989	13.4	2.0	0.2	chr12	126907913	126908534	(6366775)	C	MER41B	LTR/ERV1	(0)	634	1	980595
2163	17.3	5.8	2.9	chr12	126952959	126953446	(6321863)	C	LTR8A	LTR/ERV1	(191)	536	34	980668
3741	12.0	9.1	0.0	chr12	126953460	126954032	(6321277)	+	MER41B	LTR/ERV1	1	630	(4)	980670
1159	9.9	4.7	0.0	chr12	127161409	127161570	(6113739)	C	MER51B	LTR/ERV1	(207)	170	1	981005
724	23.7	4.1	5.4	chr12	127161571	127161747	(6113562)	+	LTR8A	LTR/ERV1	554	727	(0)	981008
2653	20.2	6.5	4.3	chr12	130763490	130764073	(2511236)	+	MER21A	LTR/ERVL	289	887	(44)	987169
218	30.2	1.6	0.0	chr12	131000169	131000231	(2275078)	+	MIRc	SINE/MIR	176	239	(29)	987620
895	31.7	9.5	0.9	chr12	131242804	131243264	(2032045)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	1	987903
394	27.7	2.3	2.4	chr12	131351714	131351911	(1923398)	+	MLT1K	LTR/ERVL-MaLR	127	255	(340)	988020
4197	13.9	2.4	1.9	chr12	131362184	131362814	(1912495)	C	MER41B	LTR/ERV1	(0)	634	1	988030
2023	29.7	4.3	5.0	chr12	131362815	131362842	(1912467)	+	L1MC5a	LINE/L1	2448	2472	(305)	988027
2089	15.9	3.3	0.3	chr12	131362843	131363196	(1912113)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	988031
455	38.0	4.3	0.4	chr12	131563961	131564203	(1711106)	C	MIR	SINE/MIR	(3)	259	7	988282
2882	14.4	13.7	1.3	chr12	131605084	131605637	(1669672)	C	MER41B	LTR/ERV1	(0)	634	1	988331
2822	18.4	11.2	3.6	chr12	131606124	131606760	(1668549)	C	LTR8	LTR/ERV1	(0)	691	1	988332
294	31.6	8.5	4.9	chr12	131625060	131625285	(1650024)	+	MIR	SINE/MIR	17	251	(11)	988358
4120	3.0	9.8	0.0	chr12	131625308	131625810	(1649499)	+	LTR6B	LTR/ERV1	1	558	(0)	988359
1217	30.4	3.8	0.7	chr12	132268352	132268991	(1006318)	+	L1M5	LINE/L1	4946	5606	(573)	989279
816	25.2	4.6	4.4	chr12	132445743	132446081	(829228)	+	LTR8	LTR/ERV1	1	425	(395)	989466
1565	19.4	5.8	1.9	chr12	132446333	132446699	(828610)	+	LTR8	LTR/ERV1	310	691	(0)	989467
22	7.2	0.0	0.0	chr12	132471069	132471097	(804212)	+	(GA)n	Simple_repeat	1	29	(0)	989509
795	24.0	6.9	0.4	chr12	132471099	132471109	(804200)	+	L1MA9	LINE/L1	5815	5825	(487)	989499
29	5.2	2.5	0.0	chr12	132471110	132471149	(804160)	+	(AGGGC)n	Simple_repeat	1	41	(0)	989510
795	24.0	6.9	0.4	chr12	132471150	132471409	(803900)	+	L1MA9	LINE/L1	5826	6104	(208)	989499
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
286	17.9	1.8	0.0	chr12	132835328	132835383	(439926)	+	MLT1B	LTR/ERVL-MaLR	34	90	(300)	990016
536	16.9	0.0	0.0	chr12	132835376	132835464	(439845)	C	U6	snRNA	(2)	105	17	990017
1387	22.7	2.9	0.0	chr12	132835450	132835749	(439560)	+	MLT1B	LTR/ERVL-MaLR	75	383	(7)	990016
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
1297	27.1	11.4	8.0	chr13	19845451	19846135	(94518193)	C	MER21C	LTR/ERVL	(97)	841	131	993195
317	31.6	5.0	2.9	chr13	20119949	20120085	(94244243)	+	MIRb	SINE/MIR	17	156	(112)	993785
1071	15.8	9.2	3.1	chr13	20120087	20120341	(94243987)	+	LTR54B	LTR/ERV1	1	272	(226)	993786
3317	8.9	6.9	7.9	chr13	20120343	20120852	(94243476)	C	MER51A	LTR/ERV1	(8)	626	114	993787
2542	9.5	3.3	25.3	chr13	20803795	20804469	(93559859)	+	MER41C	LTR/ERV1	1	521	(0)	994886
6803	9.9	0.6	0.9	chr13	22813650	22814620	(91549708)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	997954
2334	20.8	2.3	6.6	chr13	25394615	25395206	(88969122)	+	MER34A	LTR/ERV1	1	566	(5)	1001782
1333	28.3	5.2	2.2	chr13	26247614	26248075	(88116253)	+	MLT1H	LTR/ERVL-MaLR	71	547	(2)	1002963
1718	16.7	0.9	0.6	chr13	27138393	27138711	(87225617)	C	LTR47A2	LTR/ERVL	(112)	320	1	1004378
234	26.8	2.3	4.4	chr13	27138748	27138837	(87225491)	C	X7A_LINE	LINE/CR1	(164)	103	16	1004380
674	24.8	5.5	3.6	chr13	29758710	29758960	(84605368)	C	L2	LINE/L2	(2920)	499	244	1008589
205	30.2	11.3	2.3	chr13	29758992	29759079	(84605249)	C	L2	LINE/L2	(3300)	119	23	1008589
306	33.3	3.7	3.0	chr13	29759058	29759190	(84605138)	C	L3	LINE/CR1	(1485)	2614	2481	1008590
18	7.8	0.0	0.0	chr13	29850579	29850605	(84513723)	+	(GGC)n	Simple_repeat	1	27	(0)	1008715
19	2.9	8.6	0.0	chr13	30466110	30466144	(83898184)	+	(AGAGGC)n	Simple_repeat	1	38	(0)	1009745
4322	7.7	0.9	0.2	chr13	35743835	35744384	(78619944)	C	MER41A	LTR/ERV1	(0)	554	1	1017595
1305	19.9	2.6	3.0	chr13	35744385	35744478	(78619850)	+	MER4D	LTR/ERV1	200	293	(630)	1017594
3862	14.8	4.1	0.2	chr13	35745447	35746055	(78618273)	C	MER41B	LTR/ERV1	(0)	634	1	1017597
1997	18.9	1.8	3.2	chr13	35746056	35746215	(78618113)	C	L1MB7	LINE/L1	(302)	5882	5728	1017596
251	22.1	2.5	7.2	chr13	36861946	36862028	(77502300)	+	L2a	LINE/L2	2749	2827	(592)	1019180
471	17.2	1.0	2.9	chr13	36862029	36862130	(77502198)	+	MER4B	LTR/ERV1	1	100	(510)	1019181
352	25.9	20.8	2.7	chr13	36862141	36862159	(77502169)	+	L2a	LINE/L2	3105	3125	(301)	1019180
4286	11.4	1.6	1.9	chr13	36862160	36862795	(77501533)	+	MER41B	LTR/ERV1	1	634	(0)	1019182
240	25.8	13.6	0.0	chr13	41133076	41133164	(73231164)	+	MIR	SINE/MIR	109	211	(51)	1025318
257	20.5	10.3	0.0	chr13	44918161	44918238	(69446090)	+	L2	LINE/L2	2235	2321	(1098)	1031205
703	30.3	7.8	4.3	chr13	46113520	46113754	(68250574)	C	LTR33	LTR/ERVL	(28)	487	235	1033374
1158	18.6	20.3	0.0	chr13	46113755	46113990	(68250338)	C	AluJo	SINE/Alu	(16)	296	1	1033375
703	30.3	7.8	4.3	chr13	46113991	46114099	(68250229)	C	LTR33	LTR/ERVL	(281)	234	130	1033374
1294	16.2	1.1	1.9	chr13	47177820	47178166	(67186162)	C	L1MA4	LINE/L1	(0)	6300	5892	1034975
431	34.2	9.4	0.9	chr13	47178192	47178424	(67185904)	C	ERVL-B4-int	LTR/ERVL	(1181)	4576	4322	1034974
1313	13.6	10.3	0.0	chr13	47178454	47178688	(67185640)	+	MER2	DNA/TcMar-Tigger	84	345	(0)	1034976
2247	10.2	0.3	3.6	chr13	50335433	50335735	(64028593)	C	AluSq2	SINE/Alu	(19)	294	2	1039972
494	32.6	6.9	3.4	chr13	50613356	50613593	(63750735)	C	MIR	SINE/MIR	(0)	262	16	1040379
12	30.4	1.7	1.7	chr13	50909720	50909777	(63454551)	+	(GCGCC)n	Simple_repeat	1	59	(0)	1040827
2119	22.3	3.8	2.7	chr13	59356624	59357177	(55007151)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1051971
1180	21.9	13.9	4.8	chr13	60583606	60584041	(53780287)	+	MER74A	LTR/ERVL	1	482	(76)	1053720
4299	9.3	1.1	1.9	chr13	60584070	60584715	(53779613)	+	LTR8	LTR/ERV1	23	663	(28)	1053721
1093	24.4	2.5	6.3	chr13	64075760	64076092	(50288236)	C	MER52A	LTR/ERV1	(1435)	320	1	1058100
578	14.7	4.0	0.0	chr13	64076117	64076211	(50288117)	C	MER52-int	LTR/ERV1	(58)	7033	6935	1058100
2078	22.8	5.6	7.6	chr13	64274384	64275072	(50089256)	+	MER61E	LTR/ERV1	1	776	(3)	1058319
2075	16.1	0.3	4.7	chr13	67136022	67136385	(47227943)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	1061903
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
4851	25.1	7.2	3.4	chr13	89947140	89949245	(24415083)	C	L1M3	LINE/L1	(486)	5692	3500	1092304
13188	19.5	3.4	1.2	chr13	90538064	90542827	(23821501)	+	L1PA15	LINE/L1	956	5845	(828)	1093050
3123	14.2	1.4	0.0	chr13	90542828	90543334	(23820994)	+	MER75	DNA/PiggyBac	1	514	(0)	1093051
4755	17.7	4.5	4.0	chr13	90702416	90702581	(23661747)	C	L1MA10	LINE/L1	(1)	6333	6170	1093261
43	0.0	0.0	0.0	chr13	90702582	90702618	(23661710)	+	(TG)n	Simple_repeat	1	37	(0)	1093262
4755	17.7	4.5	4.0	chr13	90702619	90703357	(23660971)	C	L1MA10	LINE/L1	(165)	6169	5394	1093261
723	39.0	5.8	2.9	chr13	90762477	90763262	(23601066)	C	L2c	LINE/L2	(528)	2891	2082	1093348
22364	10.6	1.1	0.3	chr13	90812907	90819339	(23544989)	+	L1PA7	LINE/L1	8	6466	(3)	1093424
199	27.1	0.0	7.8	chr13	91095215	91095278	(23269050)	C	MIR3	SINE/MIR	(39)	169	111	1093772
2146	22.5	5.3	7.6	chr13	91309126	91309971	(23054357)	+	L1M8	LINE/L1	974	1799	(556)	1094086
507	27.8	7.7	7.0	chr13	91766435	91766580	(22597748)	+	MIR	SINE/MIR	2	149	(113)	1094716
2259	11.3	0.3	0.0	chr13	91766581	91766872	(22597456)	+	AluSg	SINE/Alu	1	293	(17)	1094717
228	26.6	3.5	6.8	chr13	92591183	92591299	(21773029)	C	LTR81C	LTR/Gypsy	(186)	967	855	1095769
1682	18.4	4.1	2.4	chr13	92591463	92591845	(21772483)	C	L1MA8	LINE/L1	(5)	6286	5897	1095770
184	43.0	2.3	0.0	chr13	92681064	92681191	(21683137)	+	MIRb	SINE/MIR	2	132	(136)	1095910
2017	14.8	0.0	1.3	chr13	92685090	92685394	(21678934)	C	AluSx1	SINE/Alu	(11)	301	1	1095914
2415	8.8	0.0	0.0	chr13	95286124	95286419	(19077909)	C	AluSx1	SINE/Alu	(16)	296	1	1099711
521	16.9	9.1	4.4	chr13	96397793	96397928	(17966400)	C	MIRc	SINE/MIR	(27)	241	99	1101555
570	25.5	9.6	4.6	chr13	96397985	96398181	(17966147)	+	MIRb	SINE/MIR	43	250	(18)	1101556
414	34.6	2.1	5.8	chr13	99437217	99437458	(14926870)	C	MIRb	SINE/MIR	(23)	245	13	1106240
17	14.0	0.0	6.7	chr13	100675097	100675141	(13689187)	+	G-rich	Low_complexity	1	45	(0)	1108313
16	10.7	0.0	3.1	chr13	102596926	102596957	(11767371)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1111016
3957	8.7	2.7	0.0	chr13	108277487	108278025	(6086303)	C	MER41A	LTR/ERV1	(0)	554	1	1118545
4246	11.9	3.3	0.1	chr13	108682320	108682999	(5681329)	C	LTR62	LTR/ERVL	(5)	704	3	1119121
262	37.7	4.5	3.2	chr13	108683013	108683297	(5681031)	+	L2c	LINE/L2	3052	3340	(47)	1119117
2232	10.7	1.3	0.0	chr13	110528144	110528443	(3835885)	+	AluSp	SINE/Alu	10	313	(0)	1121341
4086	9.2	1.3	0.0	chr13	110958167	110958711	(3405617)	+	MER41A	LTR/ERV1	1	552	(2)	1121988
11208	10.4	4.8	1.5	chr13	110962667	110963654	(3400674)	+	MER41-int	LTR/ERV1	4951	5944	(2)	1121988
3830	12.7	0.2	1.4	chr13	110963655	110964213	(3400115)	+	MER41A	LTR/ERV1	1	552	(2)	1121988
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
2098	23.7	4.1	7.8	chr13	114004203	114005208	(359120)	+	L1PB4	LINE/L1	5125	6081	(75)	1125191
16	14.0	7.5	0.0	chr14	20343644	20343683	(86700035)	+	(GGC)n	Simple_repeat	1	43	(0)	1127888
1664	30.6	16.5	3.8	chr14	22791015	22791831	(84251887)	C	L3	LINE/CR1	(2786)	1313	355	1131695
663	1.4	0.0	0.0	chr14	22929701	22929773	(84113945)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	1131978
17	9.4	2.6	5.1	chr14	23113045	23113082	(83930636)	+	(GGT)n	Simple_repeat	1	39	(0)	1132311
517	32.5	1.0	4.8	chr14	23167275	23167481	(83876237)	C	MIRc	SINE/MIR	(60)	208	10	1132393
257	24.6	3.4	0.0	chr14	23174617	23174673	(83869045)	+	L2b	LINE/L2	3308	3366	(9)	1132408
13	23.2	7.5	1.4	chr14	23301599	23301665	(83742053)	+	(GGAAGGC)n	Simple_repeat	1	72	(0)	1132659
19	10.2	7.1	0.0	chr14	23306619	23306660	(83737058)	+	(AGCCC)n	Simple_repeat	1	45	(0)	1132674
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
3556	9.2	0.4	0.0	chr14	23939576	23940044	(83103674)	C	LTR7C	LTR/ERV1	(0)	471	1	1133572
185	34.8	1.7	4.2	chr14	24242824	24242943	(82800775)	+	MIRc	SINE/MIR	56	172	(96)	1133958
2714	3.0	0.0	0.3	chr14	26843347	26843647	(80200071)	C	AluY	SINE/Alu	(11)	300	1	1137336
2236	10.4	0.0	0.3	chr14	28830133	28830430	(78213288)	C	AluY	SINE/Alu	(14)	297	1	1139768
18	16.3	0.0	0.0	chr14	30622341	30622376	(76421342)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	1142089
3481	8.1	0.0	1.1	chr14	31237093	31237544	(75806174)	C	MER41A	LTR/ERV1	(107)	447	1	1143230
1694	16.8	12.5	1.8	chr14	31237568	31238009	(75805709)	+	LTR54B	LTR/ERV1	1	496	(2)	1143231
4278	8.3	0.0	0.7	chr14	31242186	31242743	(75800975)	C	MER41A	LTR/ERV1	(0)	554	1	1143240
4121	13.4	4.6	3.2	chr14	31242744	31242857	(75800861)	C	MER72	LTR/ERV1	(605)	117	1	1143239
1994	11.1	2.4	1.4	chr14	31242878	31243165	(75800553)	C	AluSx	SINE/Alu	(21)	291	1	1143241
16	19.5	0.0	7.3	chr14	34539791	34539845	(72503873)	+	(GGCGG)n	Simple_repeat	1	55	(0)	1148042
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
4671	4.9	0.4	0.0	chr14	35347910	35348465	(71695253)	+	LTR6B	LTR/ERV1	1	558	(0)	1149845
14	0.0	0.0	0.0	chr14	36320608	36320625	(70723093)	+	(CCA)n	Simple_repeat	1	18	(0)	1151418
628	23.4	2.4	5.8	chr14	37167293	37167365	(69876353)	C	MER5A1	DNA/hAT-Charlie	(0)	166	93	1152586
4559	11.1	3.9	5.1	chr14	37167366	37168065	(69875653)	+	LTR8	LTR/ERV1	1	691	(0)	1152587
45	4.1	0.0	0.0	chr14	39432565	39432614	(67611104)	+	(GCGGG)n	Simple_repeat	1	50	(0)	1155724
2534	8.7	0.3	0.3	chr14	44162363	44162707	(62881011)	+	LTR18C	LTR/ERVL	1	345	(0)	1161393
2827	1.0	0.0	0.0	chr14	49586580	49586879	(57456839)	+	7SLRNA	srpRNA	1	300	(20)	1168209
2870	0.3	0.0	0.0	chr14	49862550	49862849	(57180869)	C	7SLRNA	srpRNA	(20)	300	1	1168780
1710	24.6	9.6	3.8	chr14	50257671	50258015	(56785703)	C	L1MEd	LINE/L1	(6114)	989	619	1169620
467	19.6	0.0	18.4	chr14	50258033	50258195	(56785523)	C	L1MC5	LINE/L1	(10)	9294	9162	1169623
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
35	21.3	5.3	3.6	chr14	60249116	60249248	(46794470)	+	(GCG)n	Simple_repeat	1	140	(0)	1184789
2363	6.2	0.3	4.5	chr14	63101881	63102189	(43941529)	+	AluY	SINE/Alu	1	296	(15)	1188735
4404	11.3	1.9	0.2	chr14	64363425	64364047	(42679671)	+	MER41B	LTR/ERV1	1	634	(0)	1191135
2747	12.2	1.8	1.1	chr14	64998254	64998693	(42045025)	C	MER65A	LTR/ERV1	(2)	443	1	1192241
394	21.8	4.3	2.6	chr14	64998705	64998817	(42044901)	C	MER5A	DNA/hAT-Charlie	(22)	167	53	1192242
195	31.2	11.1	0.0	chr14	65237845	65237924	(41805794)	+	MIR3	SINE/MIR	17	106	(102)	1192712
403	25.6	1.7	0.8	chr14	65237941	65238058	(41805660)	+	LTR79	LTR/ERVL	3	121	(406)	1192713
275	38.3	7.1	3.3	chr14	65329950	65330219	(41713499)	C	MamGypLTR2b	LTR/Gypsy	(499)	423	143	1192935
406	28.6	8.2	0.0	chr14	65349060	65349171	(41694547)	+	MER115	DNA/hAT-Tip100	42	163	(530)	1192989
966	31.1	6.8	1.9	chr14	65349170	65349477	(41694241)	+	MER115	DNA/hAT-Tip100	213	536	(157)	1192990
309	29.3	13.9	1.9	chr14	68210580	68210762	(38832956)	+	MIRc	SINE/MIR	44	255	(13)	1197379
319	31.5	5.0	1.2	chr14	68377683	68377844	(38665874)	+	MIRb	SINE/MIR	1	160	(48)	1197615
12	3.8	6.5	6.1	chr14	68793489	68793519	(38250199)	+	(GTT)n	Simple_repeat	1	33	(0)	1198273
243	32.3	8.0	3.8	chr14	69038576	69038707	(38005011)	C	L3	LINE/CR1	(34)	4065	3928	1198761
194	22.3	14.8	1.9	chr14	69038711	69038830	(38004888)	+	MIR3	SINE/MIR	15	145	(63)	1198762
629	30.0	11.7	0.0	chr14	69133056	69133282	(37910436)	C	MIR	SINE/MIR	(0)	262	6	1198916
466	29.4	5.5	2.5	chr14	69133300	69133456	(37910262)	C	MER102a	DNA/hAT-Charlie	(26)	304	143	1198917
619	19.0	0.8	0.0	chr14	70237670	70237785	(36805933)	C	MER34D	LTR/ERV1	(129)	450	334	1200902
2999	10.2	2.4	0.0	chr14	70237786	70238198	(36805520)	+	LTR3	LTR/ERVK	1	423	(9)	1200903
25	18.6	9.2	2.5	chr14	70600745	70600853	(36442865)	+	(GAGCGG)n	Simple_repeat	1	119	(0)	1201387
303	14.6	0.0	0.0	chr14	72907419	72907465	(34136253)	C	FLAM_C	SINE/Alu	(185)	117	71	1205057
3767	6.1	2.1	0.0	chr14	72907466	72907924	(34135794)	+	MER41A	LTR/ERV1	1	469	(85)	1205058
2345	8.1	0.0	0.7	chr14	72924917	72925213	(34118505)	C	AluSx1	SINE/Alu	(17)	295	1	1205097
1528	18.4	0.3	12.1	chr14	73027920	73028291	(34015427)	C	LTR54	LTR/ERV1	(182)	328	1	1205316
12	8.8	4.2	0.0	chr14	73136550	73136573	(33907145)	+	(GCG)n	Simple_repeat	1	25	(0)	1205593
16	22.1	0.0	0.0	chr14	75661105	75661136	(31382582)	+	A-rich	Low_complexity	1	32	(0)	1210880
1903	18.0	4.6	5.1	chr14	75933673	75934064	(31109654)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1211329
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
203	41.1	9.7	0.0	chr14	81005530	81005697	(26038021)	C	MamSINE1	SINE/tRNA-RTE	(7)	283	98	1219979
312	28.6	10.5	12.0	chr14	81005854	81006093	(26037625)	C	MIRc	SINE/MIR	(23)	245	5	1219980
2169	11.5	0.3	0.3	chr14	89510661	89510955	(17532763)	+	AluSz	SINE/Alu	1	295	(17)	1232207
3858	17.6	5.6	6.4	chr14	90126038	90126432	(16917286)	+	L1MC3	LINE/L1	6981	7408	(474)	1233304
43	2.3	0.0	0.0	chr14	90126433	90126476	(16917242)	+	(GTGAC)n	Simple_repeat	1	44	(0)	1233307
3858	16.2	4.3	5.5	chr14	90126477	90126555	(16917163)	+	L1MC3	LINE/L1	7306	7363	(422)	1233304
2162	11.5	0.3	0.0	chr14	90126556	90126842	(16916876)	C	AluSz	SINE/Alu	(24)	288	1	1233308
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
30	0.0	0.0	0.0	chr14	90803811	90803836	(16239882)	+	(CA)n	Simple_repeat	1	26	(0)	1234501
2620	4.5	1.0	0.0	chr14	90804054	90804361	(16239357)	+	AluY	SINE/Alu	1	311	(0)	1234502
318	25.3	13.2	0.6	chr14	91267849	91268007	(15775711)	C	L2c	LINE/L2	(936)	2483	2302	1235428
2102	10.0	0.7	0.0	chr14	91268100	91268400	(15775318)	+	LTR62	LTR/ERVL	2	304	(405)	1235437
18	28.3	1.0	5.9	chr14	91510623	91510722	(15532996)	+	(CGGCCC)n	Simple_repeat	1	101	(0)	1235829
294	31.9	0.0	2.2	chr14	95620615	95620718	(11423000)	+	MIRc	SINE/MIR	79	177	(91)	1243381
15	26.6	3.7	0.0	chr14	96502534	96502587	(10541131)	+	(GGC)n	Simple_repeat	1	56	(0)	1245031
16	14.3	0.0	6.8	chr14	96797485	96797530	(10246188)	+	G-rich	Low_complexity	1	42	(0)	1245551
871	31.9	7.8	3.2	chr14	100068002	100068726	(6974992)	C	L2b	LINE/L2	(49)	3326	2554	1251132
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
2369	20.8	4.3	0.4	chr14	100771098	100771609	(6272109)	C	MER34	LTR/ERV1	(1)	541	9	1252383
1054	30.1	12.8	0.9	chr14	101687842	101688267	(5355451)	+	LTR16C	LTR/ERVL	1	484	(5)	1253495
3506	13.9	4.3	0.0	chr14	101688283	101688837	(5354881)	+	LTR19B	LTR/ERV1	1	580	(0)	1253496
830	21.2	1.7	0.0	chr14	101732012	101732181	(5311537)	+	Arthur1A	DNA/hAT-Tip100	1	173	(4)	1253570
232	26.5	0.0	0.0	chr14	101732203	101732251	(5311467)	+	MIRb	SINE/MIR	141	189	(79)	1253569
181	31.9	4.2	4.2	chr14	101732384	101732455	(5311263)	+	MamRTE1	LINE/RTE-BovB	1395	1466	(2346)	1253571
465	35.7	4.5	2.1	chr14	102164181	102164463	(4879255)	+	L2c	LINE/L2	635	924	(2495)	1254387
190	28.0	10.9	4.7	chr14	102164513	102164598	(4879120)	+	L2c	LINE/L2	1944	2035	(1384)	1254387
247	18.6	0.0	4.8	chr14	102164608	102164669	(4879049)	+	L2-1_AMi	LINE/L2	131	189	(1046)	1254388
22	22.7	0.0	1.7	chr14	102319768	102319825	(4723893)	+	(GGC)n	Simple_repeat	1	58	(0)	1254667
2595	8.9	0.0	3.0	chr14	102533654	102534023	(4509695)	C	MER41A	LTR/ERV1	(169)	385	21	1255114
685	17.0	4.3	0.0	chr14	102534024	102534135	(4509583)	+	AluJo	SINE/Alu	13	129	(183)	1255116
3946	8.6	3.2	1.1	chr14	102551038	102551410	(4492308)	+	MER41A	LTR/ERV1	1	379	(175)	1255153
11	25.5	0.0	6.9	chr14	102592248	102592305	(4451413)	+	G-rich	Low_complexity	1	58	(0)	1255258
14	13.0	9.5	0.0	chr14	102592422	102592463	(4451255)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1255259
1672	22.7	7.5	5.8	chr14	103136806	103137010	(3906708)	C	MLT1D	LTR/ERVL-MaLR	(314)	191	1	1256253
577	28.3	6.0	1.6	chr14	103330053	103330242	(3713476)	+	MIRb	SINE/MIR	20	218	(50)	1256581
16	18.9	2.3	2.2	chr14	103385444	103385487	(3658231)	+	(GCG)n	Simple_repeat	1	45	(0)	1256712
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
15	22.5	1.8	3.6	chr14	103529138	103529192	(3514526)	+	(GGCGGA)n	Simple_repeat	1	56	(0)	1256996
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
247	27.6	9.9	0.3	chr14	104729576	104729938	(2313780)	C	TAR1	Satellite/telo	(561)	1550	1149	1258758
13	26.6	2.9	4.3	chr14	104753024	104753091	(2290627)	+	(CCGCG)n	Simple_repeat	1	70	(0)	1258777
321	32.1	3.7	1.9	chr15	26615559	26615717	(75375472)	+	MamRTE1	LINE/RTE-BovB	2851	3012	(800)	1271679
979	12.1	0.0	0.0	chr15	27128080	27128211	(74862978)	+	AluJr	SINE/Alu	1	132	(180)	1272293
476	17.9	6.1	2.4	chr15	28955916	28956041	(73035148)	+	MER5A1	DNA/hAT-Charlie	19	149	(17)	1274788
680	25.8	10.8	0.0	chr15	28968374	28968630	(73022559)	C	L1MC5	LINE/L1	(46)	2945	2659	1274810
997	21.7	1.4	0.0	chr15	28968633	28968844	(73022345)	+	MLT1B	LTR/ERVL-MaLR	1	215	(175)	1274812
307	21.6	19.1	0.0	chr15	28968883	28968984	(73022205)	C	L1MC5	LINE/L1	(1405)	1586	1461	1274810
3884	11.4	7.3	3.1	chr15	29672818	29673424	(72317765)	C	MER41B	LTR/ERV1	(0)	634	1	1275851
3665	14.8	4.4	7.5	chr15	29673425	29673894	(72317295)	C	LTR8	LTR/ERV1	(232)	459	6	1275850
4217	11.9	0.2	4.1	chr15	34656194	34656851	(67334338)	+	MER41B	LTR/ERV1	1	632	(2)	1283172
4048	9.8	6.9	1.7	chr15	35699901	35700500	(66290689)	C	MER41B	LTR/ERV1	(0)	634	1	1284711
574	30.9	6.9	0.0	chr15	35700529	35700716	(66290473)	+	MIR	SINE/MIR	50	251	(11)	1284712
243	31.5	1.1	6.1	chr15	38072160	38072257	(63918932)	C	MIRc	SINE/MIR	(112)	156	64	1287705
15	19.7	4.2	2.0	chr15	38453931	38453978	(63537211)	+	(TTA)n	Simple_repeat	1	50	(0)	1288351
33	0.0	0.0	0.0	chr15	39397945	39397972	(62593217)	+	(CA)n	Simple_repeat	1	28	(0)	1289635
2285	6.8	0.7	1.0	chr15	39933500	39933794	(62057395)	+	AluSc	SINE/Alu	1	294	(15)	1290416
20	17.4	0.0	4.1	chr15	40108775	40108847	(61882342)	+	(GGC)n	Simple_repeat	1	70	(0)	1290689
729	1.2	0.0	0.0	chr15	40593825	40593906	(61397283)	C	tRNA-Ser-AGY	tRNA	(3)	82	1	1291509
252	29.1	8.5	0.0	chr15	40694881	40694966	(61296223)	+	SVA_A	Retroposon/SVA	218	311	(1076)	1291741
528	14.0	0.0	0.0	chr15	40694892	40695002	(61296187)	C	FRAM	SINE/Alu	(81)	221	1	1291742
184	32.8	1.5	1.5	chr15	40894566	40894630	(61096559)	+	X6A_LINE	LINE/CR1	769	833	(247)	1292165
344	31.0	11.9	3.4	chr15	41416414	41416707	(60574482)	+	L2c	LINE/L2	2810	3135	(252)	1293309
282	28.4	4.3	0.0	chr15	42057696	42057783	(59933406)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	504	1294482
12	23.1	5.1	3.2	chr15	42491090	42491148	(59500041)	+	(CCGCCG)n	Simple_repeat	1	62	(0)	1295211
20	32.9	1.0	2.9	chr15	42920635	42920737	(59070452)	+	(GCT)n	Simple_repeat	1	104	(0)	1296017
15	27.3	1.8	1.8	chr15	42920715	42920769	(59070420)	+	(CCG)n	Simple_repeat	1	56	(0)	1296018
33	26.8	4.6	0.7	chr15	43185629	43185759	(58805430)	+	G-rich	Low_complexity	1	137	(0)	1296538
236	26.3	8.1	4.2	chr15	43433707	43433825	(58557364)	+	CR1-3_Croc	LINE/CR1	2562	2685	(920)	1296979
13	16.0	0.0	3.2	chr15	43493120	43493150	(58498039)	+	(CGC)n	Simple_repeat	1	31	(0)	1297100
19	31.9	3.8	0.9	chr15	43746158	43746263	(58244926)	+	(CCCAGC)n	Simple_repeat	1	110	(0)	1297538
15	30.2	0.0	6.6	chr15	43746221	43746311	(58244878)	+	(CCCCGC)n	Simple_repeat	1	91	(0)	1297539
2831	16.7	9.9	2.8	chr15	45048640	45049244	(56941945)	C	MER61F	LTR/ERV1	(23)	653	1	1299989
18	17.6	2.7	7.8	chr15	45167093	45167167	(56824022)	+	(GCCGCGG)n	Simple_repeat	1	77	(0)	1300158
643	2.8	0.0	0.0	chr15	45198606	45198677	(56792512)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300216
3938	12.7	4.9	0.0	chr15	45548693	45549274	(56441915)	+	LTR9	LTR/ERV1	1	612	(0)	1300910
4768	8.9	0.6	0.0	chr15	45583636	45584264	(56406925)	C	MER41B	LTR/ERV1	(1)	633	1	1300981
1597	12.1	4.3	2.6	chr15	45584265	45584411	(56406778)	C	MER4D1	LTR/ERV1	(123)	777	624	1300980
697	19.6	0.0	2.1	chr15	45584389	45584546	(56406643)	+	FLAM_C	SINE/Alu	6	218	(84)	1300977
186	26.2	10.3	0.0	chr15	48551178	48551238	(53439951)	+	MIR	SINE/MIR	159	226	(36)	1304966
274	35.6	5.8	2.7	chr15	48551298	48551447	(53439742)	C	MamSINE1	SINE/tRNA-RTE	(3)	287	133	1304969
3487	11.4	3.3	0.2	chr15	51634545	51635069	(50356120)	C	MER41B	LTR/ERV1	(88)	546	5	1309786
3682	8.6	3.3	0.6	chr15	51635073	51635601	(50355588)	C	MER41-int	LTR/ERV1	(0)	5946	5403	1309786
1601	19.6	4.4	0.6	chr15	51646967	51647294	(50343895)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	1309812
1481	23.8	8.3	4.7	chr15	51647295	51647579	(50343610)	C	L2a	LINE/L2	(318)	3108	2816	1309811
4037	11.6	1.9	0.2	chr15	51652211	51652795	(50338394)	+	MER41E	LTR/ERV1	1	595	(0)	1309825
12	16.3	2.8	2.7	chr15	52019123	52019158	(49972031)	+	G-rich	Low_complexity	1	37	(0)	1310540
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
1071	16.7	0.0	0.0	chr15	56735480	56735641	(45255548)	+	AluJo	SINE/Alu	136	297	(15)	1317509
887	13.8	9.7	4.9	chr15	56735646	56735850	(45255339)	C	LTR54	LTR/ERV1	(277)	233	18	1317508
2333	9.8	1.2	0.0	chr15	56735851	56736185	(45255004)	+	L1PB1	LINE/L1	5811	6149	(2)	1317510
483	32.7	7.3	2.4	chr15	56736260	56736547	(45254642)	C	MamRep605	LTR?	(122)	727	425	1317511
413	31.0	12.4	4.8	chr15	56783011	56783278	(45207911)	C	L2c	LINE/L2	(3)	3384	3094	1317605
4264	13.7	0.2	0.2	chr15	56783337	56783970	(45207219)	+	MER41B	LTR/ERV1	1	634	(0)	1317606
3838	12.3	6.5	0.3	chr15	56784224	56784817	(45206372)	+	MER41B	LTR/ERV1	1	633	(1)	1317607
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
2059	16.8	0.0	1.9	chr15	57321215	57321530	(44669659)	+	AluJb	SINE/Alu	1	310	(2)	1318499
205	33.8	4.0	7.2	chr15	57322339	57322491	(44668698)	+	L2b	LINE/L2	3023	3170	(205)	1318501
811	24.6	1.1	1.1	chr15	58332653	58332829	(43658360)	C	MIR3	SINE/MIR	(31)	177	1	1319985
3474	13.1	4.0	1.1	chr15	58352020	58352550	(43638639)	C	MER41B	LTR/ERV1	(87)	547	1	1320027
1668	8.0	1.4	0.0	chr15	58352551	58352763	(43638426)	C	MER41-int	LTR/ERV1	(2)	5944	5729	1320027
3658	11.5	5.1	3.2	chr15	58392474	58393093	(43598096)	C	MER39B	LTR/ERV1	(2)	651	20	1320090
23	13.3	3.9	1.9	chr15	59689362	59689412	(42301777)	+	(GGC)n	Simple_repeat	1	53	(0)	1322574
4547	11.2	0.1	2.2	chr15	60021358	60022004	(41969185)	C	MER41B	LTR/ERV1	(0)	634	1	1323122
1705	20.8	9.6	5.4	chr15	60022019	60022661	(41968528)	C	MER21C	LTR/ERVL	(137)	794	15	1323123
51	2.1	0.0	0.0	chr15	60127501	60127548	(41863641)	+	(TG)n	Simple_repeat	1	48	(0)	1323302
290	30.7	7.8	5.0	chr15	60127784	60127944	(41863245)	C	MIRc	SINE/MIR	(86)	182	17	1323303
1582	26.8	7.5	1.1	chr15	62094667	62095130	(39896059)	+	MER20B	DNA/hAT-Charlie	1	496	(287)	1326336
16	9.9	0.0	5.6	chr15	62390426	62390476	(39600713)	+	(GCCGC)n	Simple_repeat	1	48	(0)	1326828
14	22.0	2.0	3.9	chr15	62390511	62390561	(39600628)	+	(CGCGCT)n	Simple_repeat	1	52	(0)	1326829
17	23.3	0.0	0.0	chr15	62390560	62390604	(39600585)	+	(CGGCGG)n	Simple_repeat	1	45	(0)	1326830
2364	7.9	0.3	1.0	chr15	63178794	63179097	(38812092)	+	AluSx1	SINE/Alu	1	302	(10)	1328118
13	16.8	0.0	5.4	chr15	63189497	63189533	(38801656)	+	(GGCGG)n	Simple_repeat	1	37	(0)	1328138
4460	8.8	0.0	0.4	chr15	63226696	63227251	(38763938)	C	MER41A	LTR/ERV1	(0)	554	1	1328196
17	16.3	6.2	0.0	chr15	63504421	63504468	(38486721)	+	G-rich	Low_complexity	1	51	(0)	1328722
4235	16.2	2.6	2.7	chr15	63792673	63793125	(38198064)	C	MER21B	LTR/ERVL	(52)	816	362	1329140
4655	9.8	0.2	0.2	chr15	63793126	63793756	(38197433)	+	MER41B	LTR/ERV1	1	631	(3)	1329141
16	17.0	3.4	4.9	chr15	64460651	64460687	(37530502)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1330440
347	24.2	2.9	0.0	chr15	65185929	65186027	(36805162)	+	LTR33	LTR/ERVL	312	413	(102)	1332079
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
4640	12.0	0.0	0.3	chr15	66624022	66624655	(35366534)	+	MER41B	LTR/ERV1	3	634	(0)	1335108
3864	12.5	2.8	5.5	chr15	67900450	67900894	(34090295)	C	MER41B	LTR/ERV1	(204)	430	1	1337340
1304	23.1	7.4	5.0	chr15	67900895	67901183	(34090006)	C	L1MEg	LINE/L1	(939)	5207	4906	1337335
531	23.1	9.3	0.7	chr15	68464193	68464340	(33526849)	C	MIRc	SINE/MIR	(69)	199	38	1338380
236	21.7	6.2	0.0	chr15	69414047	69414106	(32577083)	+	MLT1L	LTR/ERVL-MaLR	474	537	(73)	1340178
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
210	36.4	4.8	0.0	chr15	72376328	72376445	(29614744)	C	L2c	LINE/L2	(233)	3154	3031	1345344
382	21.9	15.0	0.0	chr15	72473556	72473674	(29517515)	+	MIRb	SINE/MIR	87	226	(42)	1345545
282	34.2	15.6	1.2	chr15	74389383	74389628	(27601561)	C	L2a	LINE/L2	(85)	3341	3054	1348752
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
20	18.4	2.0	1.9	chr15	74615919	74615969	(27375220)	+	(GCG)n	Simple_repeat	1	52	(0)	1349184
20	7.9	0.0	0.0	chr15	74873424	74873450	(27117739)	+	(C)n	Simple_repeat	1	27	(0)	1349665
951	24.8	9.7	5.6	chr15	74889338	74889909	(27101280)	+	L2a	LINE/L2	2817	3426	(0)	1349709
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
187	32.2	5.3	0.0	chr15	75043721	75043810	(26947379)	C	X6A_LINE	LINE/CR1	(6)	1074	980	1350066
3945	13.8	9.0	4.3	chr15	75065784	75066524	(26924665)	C	LTR19C	LTR/ERV1	(0)	779	1	1350108
4124	10.3	6.0	7.2	chr15	75167729	75168425	(26822764)	C	LTR8	LTR/ERV1	(0)	691	4	1350326
858	20.6	10.9	1.3	chr15	75168426	75168531	(26822658)	C	MLT1A0	LTR/ERVL-MaLR	(173)	192	87	1350325
445	31.5	5.6	2.1	chr15	75171730	75171917	(26819272)	C	MIRb	SINE/MIR	(18)	250	56	1350331
1906	17.3	0.0	2.5	chr15	75171936	75172253	(26818936)	C	AluJb	SINE/Alu	(2)	310	1	1350332
1748	15.2	4.4	0.0	chr15	75903475	75903756	(26087433)	+	AluJb	SINE/Alu	2	296	(16)	1351719
19	20.0	0.9	11.1	chr15	78872783	78872889	(23118300)	+	G-rich	Low_complexity	1	108	(0)	1356790
12	16.8	6.3	8.3	chr15	80059481	80059559	(21931630)	+	(TCCGGCC)n	Simple_repeat	1	84	(0)	1358903
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
4184	12.7	0.5	3.5	chr15	80769404	80770057	(21221132)	C	MER41B	LTR/ERV1	(0)	634	1	1360083
1297	14.9	7.2	1.8	chr15	80770058	80770238	(21220951)	+	AluJb	SINE/Alu	41	235	(77)	1360082
3047	27.4	7.5	8.8	chr15	81166803	81167962	(20823227)	+	MLT1J-int	LTR/ERVL-MaLR	36	1191	(196)	1360835
22	17.7	1.9	1.9	chr15	82046055	82046107	(19945082)	+	(CCCT)n	Simple_repeat	1	54	(0)	1362235
19	23.5	1.4	4.2	chr15	82046309	82046378	(19944811)	+	(CCGCCCC)n	Simple_repeat	1	71	(0)	1362236
648	27.4	6.2	6.8	chr15	83092326	83092617	(18898572)	+	MER39	LTR/ERV1	1	509	(198)	1364035
247	8.9	13.5	0.0	chr15	83092636	83092680	(18898509)	C	U2	snRNA	(135)	53	2	1364036
17822	11.1	3.1	5.9	chr15	83167579	83169318	(18821871)	+	L1PA16	LINE/L1	3087	4868	(1981)	1364174
1200	0.0	0.0	0.0	chr15	83169319	83169444	(18821745)	+	AluYc	SINE/Alu	174	299	(0)	1364177
17822	11.1	3.1	5.9	chr15	83169445	83169519	(18821670)	+	L1PA16	LINE/L1	4869	4946	(1903)	1364174
739	25.9	10.1	13.3	chr15	84950720	84950821	(17040368)	+	MLT1J	LTR/ERVL-MaLR	103	214	(298)	1366989
804	19.0	12.6	0.0	chr15	84950822	84951016	(17040173)	C	MER58A	DNA/hAT-Charlie	(1)	223	1	1366991
739	25.9	10.1	13.3	chr15	84951017	84951173	(17040016)	+	MLT1J	LTR/ERVL-MaLR	215	358	(154)	1366989
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
18489	8.5	3.2	1.3	chr15	87667279	87668888	(14322301)	+	HUERS-P1-int	LTR/ERV1	4617	6262	(1)	1371135
5478	8.2	1.4	0.1	chr15	87668889	87669568	(14321621)	+	LTR8	LTR/ERV1	1	689	(2)	1371135
494	33.1	6.4	7.5	chr15	88537760	88538108	(13453081)	+	L2b	LINE/L2	3030	3374	(1)	1372565
3776	6.3	9.0	0.0	chr15	88538134	88538641	(13452548)	+	LTR6B	LTR/ERV1	1	558	(0)	1372566
2275	10.1	2.9	0.0	chr15	88545415	88545721	(13445468)	+	HERVS71-int	LTR/ERV1	8594	8909	(69)	1372566
3848	5.9	8.8	0.0	chr15	88545722	88546230	(13444959)	+	LTR6B	LTR/ERV1	1	558	(0)	1372568
1385	15.6	9.9	6.6	chr15	88938746	88938919	(13052270)	+	MER4-int	LTR/ERV1	435	623	(5975)	1373281
2205	14.2	5.2	3.5	chr15	88938920	88939314	(13051875)	C	MER48	LTR/ERV1	(0)	407	6	1373284
193	24.8	11.4	6.4	chr15	89782104	89782228	(12208961)	+	MIR3	SINE/MIR	7	138	(70)	1374871
4195	11.7	4.3	1.0	chr15	89782290	89782735	(12208454)	+	MER41B	LTR/ERV1	2	449	(185)	1374872
3280	13.7	2.6	0.6	chr15	90648416	90648950	(11342239)	+	MER41B	LTR/ERV1	2	547	(87)	1376776
1672	25.8	13.2	1.0	chr15	90649764	90650448	(11340741)	C	HAL1b	LINE/L1	(0)	2421	1641	1376780
400	26.2	9.7	10.8	chr15	90841251	90841308	(11149881)	+	L2b	LINE/L2	3028	3086	(289)	1377215
1234	22.0	6.7	5.6	chr15	90841309	90841501	(11149688)	C	LTR37A	LTR/ERV1	(3)	423	233	1377216
456	31.5	5.6	4.5	chr15	90901701	90901818	(11089371)	+	L1ME4c	LINE/L1	282	409	(421)	1377331
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
861	21.4	8.6	0.5	chr15	92804313	92804505	(9186684)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	1380491
2399	17.4	0.9	3.1	chr15	92848883	92849160	(9142029)	+	MLT1C	LTR/ERVL-MaLR	20	285	(182)	1380607
2194	10.7	0.7	0.0	chr15	92849161	92849458	(9141731)	+	AluSx1	SINE/Alu	2	301	(11)	1380608
274	29.3	11.0	4.0	chr15	96050330	96050631	(5940558)	+	L1ME4c	LINE/L1	351	520	(310)	1385299
234	33.7	7.3	4.5	chr15	96273842	96274040	(5717149)	+	L2b	LINE/L2	3148	3352	(23)	1385647
20	28.8	2.0	4.0	chr15	101251700	101251798	(739391)	+	(CGG)n	Simple_repeat	1	101	(0)	1392534
23	7.1	6.5	2.0	chr15	101277420	101277465	(713724)	+	(CCG)n	Simple_repeat	1	49	(0)	1392581
1955	22.5	2.4	3.9	chr16	144861	145323	(90193022)	C	L1MB5	LINE/L1	(9)	6165	5710	1394247
499	29.7	6.1	0.0	chr16	235714	235868	(90102477)	C	L2a	LINE/L2	(8)	3418	3254	1394435
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
4241	8.2	0.7	2.0	chr16	1293859	1294279	(89044066)	C	MER41A	LTR/ERV1	(130)	424	1	1395699
684	17.3	0.8	6.8	chr16	1294280	1294311	(89044034)	+	AluJr	SINE/Alu	202	229	(83)	1395698
17	9.1	0.0	0.0	chr16	1299697	1299732	(89038613)	+	(T)n	Simple_repeat	1	36	(0)	1395715
17	10.7	7.1	2.2	chr16	1351946	1351987	(88986358)	+	(GCG)n	Simple_repeat	1	45	(0)	1395772
242	27.9	17.2	0.9	chr16	1959282	1959393	(88378952)	+	L2a	LINE/L2	3267	3400	(26)	1396716
722	23.7	6.3	1.1	chr16	2010039	2010217	(88328128)	C	MER53	DNA/hAT	(4)	189	1	1396770
13	19.5	0.0	2.7	chr16	2048028	2048064	(88290281)	+	(GCGCG)n	Simple_repeat	1	37	(0)	1396836
13	27.1	0.0	2.1	chr16	2205516	2205562	(88132783)	+	G-rich	Low_complexity	1	47	(0)	1397037
41	17.9	0.8	8.2	chr16	2214718	2214850	(88123495)	+	(CCG)n	Simple_repeat	1	134	(0)	1397044
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
13	20.7	5.8	1.8	chr16	2473947	2473998	(87864347)	+	G-rich	Low_complexity	1	55	(0)	1397490
13	21.1	2.6	0.0	chr16	2514189	2514226	(87824119)	+	G-rich	Low_complexity	1	39	(0)	1397556
13	11.1	9.3	5.1	chr16	2752706	2752759	(87585586)	+	(GAGGC)n	Simple_repeat	1	59	(0)	1397879
11	24.0	2.6	0.0	chr16	2842397	2842435	(87495910)	+	(CCAGAG)n	Simple_repeat	1	40	(0)	1398009
16	4.5	0.0	0.0	chr16	2969361	2969383	(87368962)	+	(GCC)n	Simple_repeat	1	23	(0)	1398274
2403	7.6	2.3	0.0	chr16	3005643	3005943	(87332402)	C	AluSp	SINE/Alu	(5)	308	1	1398324
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
18	3.8	3.7	0.0	chr16	3184218	3184244	(87154101)	+	(TGT)n	Simple_repeat	1	28	(0)	1398680
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
307	28.7	11.6	6.0	chr16	4307224	4307547	(86030798)	+	L2a	LINE/L2	2958	3383	(43)	1400908
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
3626	14.9	3.3	4.5	chr16	8109316	8109935	(82228410)	C	LTR9	LTR/ERV1	(0)	612	1	1408337
2396	8.1	0.0	0.3	chr16	8112559	8112855	(82225490)	+	AluY	SINE/Alu	1	296	(15)	1408346
4001	13.8	0.3	9.2	chr16	8112856	8113553	(82224792)	+	LTR8	LTR/ERV1	45	691	(0)	1408345
203	36.6	2.4	2.4	chr16	8568207	8568332	(81770013)	+	L2c	LINE/L2	3260	3385	(2)	1409296
18	23.9	4.8	5.5	chr16	8568385	8568488	(81769857)	+	(ATG)n	Simple_repeat	1	109	(0)	1409297
12	9.7	0.0	0.0	chr16	8568474	8568495	(81769850)	+	(TGAC)n	Simple_repeat	1	22	(0)	1409298
23	19.9	3.5	0.0	chr16	8568545	8568602	(81769743)	+	(ATG)n	Simple_repeat	1	60	(0)	1409299
1051	16.1	1.2	0.0	chr16	8594602	8594763	(81743582)	+	AluSx1	SINE/Alu	133	296	(16)	1409366
1027	27.0	9.7	6.4	chr16	9078898	9079336	(81259009)	C	MLT1J	LTR/ERVL-MaLR	(50)	462	8	1410539
15	7.8	0.0	6.5	chr16	9091355	9091385	(81246960)	+	(CTC)n	Simple_repeat	1	31	(0)	1410574
2313	9.0	0.0	0.0	chr16	10328074	10328361	(80009984)	C	AluSq2	SINE/Alu	(25)	288	1	1413231
583	13.9	0.0	0.0	chr16	10328370	10328448	(80009897)	C	AluJb	SINE/Alu	(23)	289	211	1413232
1696	9.3	1.7	0.0	chr16	10328480	10328705	(80009640)	+	MER41C	LTR/ERV1	1	230	(291)	1413233
1576	21.6	14.5	6.0	chr16	10356919	10357483	(79980862)	C	LTR25	LTR/ERV1	(9)	835	215	1413317
375	16.5	0.0	14.1	chr16	10357466	10357557	(79980788)	C	MER61E	LTR/ERV1	(458)	111	33	1413318
1624	21.8	6.2	10.1	chr16	10362125	10362571	(79975774)	C	LTR77	LTR/ERV1	(178)	444	2	1413332
2638	8.6	2.4	1.3	chr16	10501409	10501555	(79836790)	+	PABL_A	LTR/ERV1	278	433	(227)	1413567
13	33.0	1.7	0.0	chr16	10944605	10944664	(79393681)	+	(CCG)n	Simple_repeat	1	61	(0)	1414616
1454	22.2	7.0	1.4	chr16	11129128	11129548	(79208797)	C	Charlie1b	DNA/hAT-Charlie	(1)	522	77	1414974
18	15.0	0.0	2.6	chr16	11201822	11201860	(79136485)	+	(AATG)n	Simple_repeat	1	39	(0)	1415095
2233	10.6	1.0	0.7	chr16	11428171	11428473	(78909872)	C	AluSq	SINE/Alu	(9)	304	1	1415648
4132	9.1	0.5	2.1	chr16	11428474	11428803	(78909542)	C	MER41A	LTR/ERV1	(228)	326	1	1415647
36	25.6	1.2	7.0	chr16	11797137	11797305	(78541040)	+	(GCG)n	Simple_repeat	1	171	(0)	1416501
837	15.4	0.0	0.0	chr16	12293125	12293241	(78045104)	C	AluJr	SINE/Alu	(195)	117	1	1417632
515	29.1	11.9	0.0	chr16	12293245	12293385	(78044960)	C	MIRb	SINE/MIR	(59)	209	50	1417631
284	33.2	9.5	4.3	chr16	12473516	12473534	(77864811)	+	MIRb	SINE/MIR	1	18	(250)	1418000
4110	10.7	0.4	0.0	chr16	12473535	12474086	(77864259)	+	MER41A	LTR/ERV1	1	554	(0)	1418001
304	24.4	3.1	3.9	chr16	12547197	12547324	(77791021)	C	L2b	LINE/L2	(279)	3096	2970	1418149
3364	11.6	4.9	1.1	chr16	12611148	12611680	(77726665)	+	MER41A	LTR/ERV1	1	554	(0)	1418242
14	9.3	2.5	7.3	chr16	15056033	15056072	(75282273)	+	(GCCGCCC)n	Simple_repeat	1	41	(0)	1423502
4662	9.3	1.9	0.3	chr16	15570564	15571187	(74767158)	C	MER41B	LTR/ERV1	(0)	634	1	1424735
467	18.9	0.0	16.9	chr16	15571188	15571236	(74767109)	C	MER20	DNA/hAT-Charlie	(143)	76	36	1424734
1205	23.6	2.4	13.2	chr16	15571270	15571359	(74766986)	+	MER4C	LTR/ERV1	1	83	(382)	1424736
2331	7.1	1.7	1.0	chr16	15571360	15571654	(74766691)	C	AluYh3	SINE/Alu	(14)	297	1	1424737
2205	13.7	2.9	0.8	chr16	15574004	15574370	(74763975)	C	THE1D	LTR/ERVL-MaLR	(6)	375	1	1424745
1420	11.6	3.6	0.0	chr16	15574371	15574586	(74763759)	C	LTR8	LTR/ERV1	(467)	224	1	1424743
3734	13.7	0.5	2.4	chr16	15574592	15574795	(74763550)	C	LTR39	LTR/ERV1	(166)	617	423	1424742
2811	9.6	24.1	2.0	chr16	15575523	15576013	(74762332)	C	MER51A	LTR/ERV1	(0)	634	1	1424747
2317	8.4	0.0	2.9	chr16	15576038	15576346	(74761999)	C	AluSc8	SINE/Alu	(11)	300	1	1424748
3137	18.8	2.6	1.9	chr16	15576752	15577391	(74760954)	C	LTR9D	LTR/ERV1	(0)	645	1	1424752
3814	14.2	1.9	2.9	chr16	17081986	17082628	(73255717)	C	MER41B	LTR/ERV1	(38)	596	3	1428280
1666	14.1	0.0	9.6	chr16	17082629	17082940	(73255405)	C	MER41B	LTR/ERV1	(241)	393	112	1428281
4275	14.7	0.0	0.2	chr16	17591112	17591746	(72746599)	+	MER41B	LTR/ERV1	1	634	(0)	1429437
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
13	16.5	0.0	0.0	chr16	19523968	19523994	(70814351)	+	GA-rich	Low_complexity	1	27	(0)	1433773
3728	8.1	11.1	1.7	chr16	20747061	20747599	(69590746)	+	LTR4	LTR/ERV1	1	596	(0)	1436402
195	34.6	18.6	0.8	chr16	20747669	20747796	(69590549)	C	MamTip2	DNA/hAT-Tip100	(149)	156	1	1436403
577	29.0	8.7	0.3	chr16	20826582	20826930	(69511415)	+	L1ME4a	LINE/L1	5673	6053	(71)	1436564
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
14	21.5	2.2	2.2	chr16	22206227	22206271	(68132074)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1439529
388	14.3	0.0	0.0	chr16	22298231	22298293	(68040052)	+	MIR	SINE/MIR	118	180	(82)	1439786
370	35.0	4.3	1.3	chr16	22298460	22298618	(68039727)	C	MIR	SINE/MIR	(97)	165	2	1439787
17	17.4	3.5	5.1	chr16	23149397	23149453	(67188892)	+	(AGCG)n	Simple_repeat	1	59	(0)	1441521
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
330	21.3	13.9	11.0	chr16	23597463	23597585	(66740760)	+	HAL1b	LINE/L1	1844	1991	(430)	1442649
1843	23.3	4.7	6.5	chr16	23821910	23822392	(66515953)	+	L1ME4b	LINE/L1	129	608	(284)	1443222
2078	26.2	6.9	0.8	chr16	23862046	23862686	(66475659)	C	L1MEb	LINE/L1	(5386)	684	2	1443316
239	17.4	0.0	0.0	chr16	23862697	23862742	(66475603)	C	MIR3	SINE/MIR	(71)	137	92	1443317
2376	9.1	0.0	0.0	chr16	23862744	23863051	(66475294)	+	MER41C	LTR/ERV1	1	308	(213)	1443318
422	31.0	9.0	0.6	chr16	23953000	23953171	(66385174)	C	MIR	SINE/MIR	(12)	250	63	1443533
14	11.4	0.0	10.6	chr16	25015265	25015311	(65323034)	+	(GGCGG)n	Simple_repeat	1	47	(0)	1446013
25	12.3	0.0	2.1	chr16	25015438	25015484	(65322861)	+	(GCCGA)n	Simple_repeat	1	47	(0)	1446014
16	19.6	0.0	5.8	chr16	25049456	25049507	(65288838)	+	A-rich	Low_complexity	1	52	(0)	1446105
2573	17.3	2.5	4.2	chr16	25049628	25050152	(65288193)	+	Tigger3b	DNA/TcMar-Tigger	25	540	(691)	1446106
1943	23.5	8.0	0.7	chr16	25063876	25064444	(65273901)	+	MER90a	LTR/ERV1	1	614	(0)	1446143
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
261	20.5	11.2	4.4	chr16	27203168	27203324	(63135021)	+	MIRb	SINE/MIR	26	200	(62)	1450614
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
190	27.1	11.4	0.0	chr16	28212334	28212403	(62125942)	C	L2b	LINE/L2	(0)	3375	3297	1452867
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
13	11.7	3.6	0.0	chr16	28950961	28950988	(61387357)	+	(GGCGA)n	Simple_repeat	1	29	(0)	1454833
739	29.1	6.8	9.1	chr16	29655243	29655473	(60682872)	C	L2a	LINE/L2	(5)	3421	3196	1456211
6766	12.4	5.0	6.6	chr16	29782762	29784049	(60554296)	+	MER11A	LTR/ERVK	1	1266	(0)	1456558
15	27.4	2.9	2.8	chr16	29807510	29807578	(60530767)	+	(GCG)n	Simple_repeat	1	71	(0)	1456611
26	0.0	0.0	0.0	chr16	30076007	30076031	(60262314)	+	(GCG)n	Simple_repeat	1	25	(0)	1457216
289	26.6	1.2	0.0	chr16	30092840	30092918	(60245427)	C	MIRc	SINE/MIR	(77)	191	112	1457246
214	28.1	3.4	0.0	chr16	30697877	30697933	(59640412)	+	MIR1_Amn	SINE/MIR	39	97	(133)	1458686
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
1075	11.5	0.0	3.6	chr16	30747851	30748015	(59590330)	+	AluJr	SINE/Alu	137	295	(17)	1458788
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
1843	24.7	7.0	1.1	chr16	30894574	30895183	(59443162)	+	L1ME3A	LINE/L1	5456	6103	(70)	1459125
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
21	19.2	3.2	3.1	chr16	30958013	30958075	(59380270)	+	(CGC)n	Simple_repeat	1	65	(0)	1459289
193	32.0	15.9	2.2	chr16	31072717	31072895	(59265450)	+	L2c	LINE/L2	2911	3118	(269)	1459560
256	22.4	2.3	5.6	chr16	31508625	31508714	(58829631)	+	MIRc	SINE/MIR	53	139	(129)	1460458
731	16.8	1.5	0.3	chr16	35215324	35215611	(55122734)	+	HSAT6	Satellite	1	291	(5)	1464570
789	21.2	0.3	0.0	chr16	35252413	35252701	(55085644)	C	HSAT6	Satellite	(0)	289	1	1464604
552	17.9	7.9	0.8	chr16	35409502	35409798	(54928547)	C	HSAT6	Satellite	(23)	318	1	1464780
998	21.6	9.2	0.9	chr16	35409840	35410129	(54928216)	C	MSTA	LTR/ERVL-MaLR	(47)	317	18	1464781
883	16.9	1.1	0.5	chr16	35533728	35534035	(54804310)	C	HSAT6	Satellite	(1)	309	1	1464906
2100	7.8	3.4	0.0	chr16	35552518	35552773	(54785572)	+	AluSc	SINE/Alu	27	291	(18)	1464925
3949	15.2	2.5	1.9	chr16	46943138	46943588	(43394757)	C	MER41B	LTR/ERV1	(185)	449	2	1466370
1906	15.8	0.0	4.6	chr16	46943589	46943757	(43394588)	+	AluJr	SINE/Alu	153	309	(3)	1466369
12	20.8	3.6	5.3	chr16	48244255	48244309	(42094036)	+	(CGGAGG)n	Simple_repeat	1	57	(0)	1468422
17	21.6	6.1	1.4	chr16	48610176	48610241	(41728104)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	1469092
4607	10.1	1.7	0.3	chr16	50458067	50458689	(39879656)	+	MER41B	LTR/ERV1	3	634	(0)	1472528
1355	16.1	13.2	1.5	chr16	50730918	50731177	(39607168)	+	AluJr	SINE/Alu	2	296	(16)	1473078
13	18.1	2.0	6.0	chr16	50742150	50742198	(39596147)	+	G-rich	Low_complexity	1	50	(0)	1473097
2561	13.9	3.6	4.6	chr16	56540102	56540554	(33797791)	+	LTR26	LTR/ERV1	1	448	(155)	1483236
1089	33.5	4.3	4.5	chr16	57062051	57062731	(33275614)	C	L1MC5a	LINE/L1	(38)	2739	2061	1484268
2221	15.9	4.6	7.8	chr16	57062749	57063102	(33275243)	C	L1MB2	LINE/L1	(7)	6164	5823	1484269
4407	5.9	2.5	0.6	chr16	57109505	57109926	(33228419)	C	MER41A	LTR/ERV1	(122)	432	2	1484372
498	24.6	0.0	2.6	chr16	57109938	57110054	(33228291)	C	L4_A_Mam	LINE/RTE-X	(211)	4779	4666	1484374
387	28.4	16.6	1.0	chr16	57462315	57462527	(32875818)	C	L1ME3G	LINE/L1	(344)	580	317	1485115
12	18.8	2.6	2.6	chr16	58129651	58129688	(32208657)	+	(ACGTG)n	Simple_repeat	1	39	(0)	1486505
2866	11.8	2.1	1.9	chr16	58433394	58433808	(31904537)	C	LTR47B2	LTR/ERVL	(12)	422	1	1487087
1657	18.4	0.9	3.7	chr16	65764612	65764932	(24573413)	+	MLT1B	LTR/ERVL-MaLR	1	312	(78)	1498472
4475	9.7	0.8	5.8	chr16	65764933	65765441	(24572904)	+	MER41B	LTR/ERV1	1	493	(141)	1498473
3900	11.0	2.3	1.4	chr16	65768863	65769426	(24568919)	C	MER61E	LTR/ERV1	(0)	569	1	1498482
740	19.3	0.6	12.9	chr16	65769716	65769901	(24568444)	C	MER72	LTR/ERV1	(302)	420	260	1498483
763	6.9	0.0	0.0	chr16	65769902	65770002	(24568343)	+	MER61E	LTR/ERV1	1	101	(468)	1498484
852	21.6	0.6	0.0	chr16	65770011	65770177	(24568168)	+	MER72	LTR/ERV1	554	721	(1)	1498481
26	12.3	0.0	0.0	chr16	65975265	65975317	(24363028)	+	(GCATGACTCA)n	Simple_repeat	1	53	(0)	1498845
199	33.3	1.3	1.3	chr16	65975330	65975408	(24362937)	+	MIRb	SINE/MIR	96	174	(94)	1498846
225	18.2	0.0	2.2	chr16	65975403	65975447	(24362898)	+	L2b	LINE/L2	3317	3360	(15)	1498847
426	31.1	14.6	2.0	chr16	67028440	67028642	(23309703)	C	MIRb	SINE/MIR	(15)	253	21	1500921
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
20	26.9	0.0	2.9	chr16	67562427	67562496	(22775849)	+	(CCCCT)n	Simple_repeat	1	70	(0)	1501890
13	8.1	0.0	6.7	chr16	67893187	67893216	(22445129)	+	(CCGCC)n	Simple_repeat	1	30	(0)	1502543
29	0.0	0.0	0.0	chr16	67893278	67893304	(22445041)	+	(GGC)n	Simple_repeat	1	27	(0)	1502544
2594	5.5	0.3	0.3	chr16	69386211	69386520	(20951825)	+	AluSp	SINE/Alu	1	310	(3)	1505677
858	16.5	0.0	0.0	chr16	69395977	69396109	(20942236)	C	AluJb	SINE/Alu	(169)	133	1	1505703
882	15.8	8.4	0.0	chr16	70396447	70396598	(19941747)	+	AluJr	SINE/Alu	125	290	(22)	1507898
2369	7.0	0.0	1.0	chr16	70414888	70415173	(19923172)	C	AluY	SINE/Alu	(26)	285	1	1507936
1610	14.2	0.0	2.4	chr16	70415174	70415258	(19923087)	C	AluSx1	SINE/Alu	(177)	135	54	1507935
231	26.7	1.3	6.2	chr16	70415281	70415360	(19922985)	+	LTR21A	LTR/ERV1	72	147	(334)	1507938
25	19.9	1.5	2.9	chr16	71289614	71289681	(19048664)	+	G-rich	Low_complexity	1	69	(0)	1509393
1305	17.8	4.6	3.9	chr16	71484733	71485037	(18853308)	+	Charlie4a	DNA/hAT-Charlie	38	344	(164)	1509765
1209	25.9	8.0	7.1	chr16	75066862	75067450	(15270895)	C	MLT1G3	LTR/ERVL-MaLR	(22)	573	1	1516048
571	34.5	11.9	1.0	chr16	75067455	75067852	(15270493)	+	L1M5	LINE/L1	4590	5036	(1110)	1516046
658	23.6	1.8	11.6	chr16	75761268	75761569	(14576776)	+	MLT1B	LTR/ERVL-MaLR	119	390	(0)	1517428
3892	11.8	7.6	0.2	chr16	77739133	77739719	(12598626)	C	MER41B	LTR/ERV1	(0)	634	1	1520389
652	22.0	15.9	4.5	chr16	77739731	77740063	(12598282)	+	LTR16A2	LTR/ERVL	114	484	(11)	1520390
1081	27.6	3.3	0.0	chr16	78796248	78796540	(11541805)	C	MLT1J2	LTR/ERVL-MaLR	(132)	316	14	1522427
3141	10.3	0.2	0.0	chr16	79409931	79410357	(10927988)	+	MER57A1	LTR/ERV1	1	428	(4)	1523497
668	25.8	4.8	1.0	chr16	79410358	79410409	(10927936)	+	MER3	DNA/hAT-Charlie	158	208	(1)	1523496
451	21.8	1.9	0.0	chr16	79971546	79971646	(10366699)	+	MLT1F2	LTR/ERVL-MaLR	458	560	(0)	1524511
196	18.6	10.6	0.0	chr16	81495883	81495941	(8842404)	+	MIR3	SINE/MIR	119	184	(24)	1527393
288	34.6	3.0	3.0	chr16	83713595	83713725	(6624620)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	463	1531467
355	27.5	9.0	0.0	chr16	83713836	83713966	(6624379)	C	MLT1K	LTR/ERVL-MaLR	(152)	443	300	1531467
16	8.1	0.0	0.0	chr16	84140052	84140077	(6198268)	+	(CTTCC)n	Simple_repeat	1	26	(0)	1532208
1130	26.1	4.5	4.3	chr16	84423419	84423815	(5914530)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	51	1532807
2941	25.8	6.3	2.1	chr16	85046675	85047999	(5290346)	C	L1MD2	LINE/L1	(5217)	1423	47	1534085
239	20.0	2.8	2.8	chr16	85055326	85055397	(5282948)	C	Kanga1a	DNA/TcMar-Tc2	(680)	74	3	1534101
468	34.8	10.2	2.8	chr16	85055408	85055842	(5282503)	C	L3	LINE/CR1	(1050)	3049	2579	1534093
1845	15.2	1.0	4.4	chr16	85297495	85297810	(5040535)	C	AluJb	SINE/Alu	(7)	305	1	1534581
229	35.3	10.7	0.5	chr16	85306345	85306546	(5031799)	+	L3	LINE/CR1	3685	3909	(190)	1534600
1085	13.3	0.6	3.0	chr16	85306548	85306712	(5031633)	C	FRAM	SINE/Alu	(15)	161	1	1534601
2371	10.8	0.0	0.0	chr16	85322609	85322915	(5015430)	C	AluSx1	SINE/Alu	(5)	307	1	1534633
280	31.1	8.1	5.1	chr16	85322916	85323044	(5015301)	C	MIRb	SINE/MIR	(121)	147	13	1534632
2615	17.9	7.2	1.1	chr16	85334688	85335208	(5003137)	+	MER34C2	LTR/ERV1	1	555	(0)	1534656
1216	24.5	11.0	4.6	chr16	85402930	85403412	(4934933)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	1	1534781
2116	12.1	0.0	3.8	chr16	85403508	85403820	(4934525)	+	AluJb	SINE/Alu	1	301	(11)	1534783
1244	27.2	4.5	4.2	chr16	85567278	85567723	(4770622)	C	MLT1G3	LTR/ERVL-MaLR	(45)	550	107	1535074
753	17.9	2.1	0.0	chr16	85850409	85850548	(4487797)	C	MER77B	LTR/ERVL	(557)	143	1	1535557
11	10.6	0.0	10.5	chr16	87317335	87317372	(3020973)	+	(AACCC)n	Simple_repeat	1	38	(0)	1538230
13	4.7	0.0	4.2	chr16	87317392	87317415	(3020930)	+	(CGCC)n	Simple_repeat	1	24	(0)	1538231
13	4.1	3.7	3.6	chr16	87388506	87388532	(2949813)	+	(AGAGG)n	Simple_repeat	1	28	(0)	1538349
2276	10.1	0.3	3.5	chr16	87780119	87780235	(2558110)	C	AluSp	SINE/Alu	(197)	116	1	1539049
11	9.1	2.3	11.1	chr16	88663355	88663398	(1674947)	+	(GGCGTC)n	Simple_repeat	1	45	(0)	1540289
489	22.7	13.9	4.4	chr16	89115549	89115750	(1222595)	C	L1MD	LINE/L1	(2052)	5733	5511	1540816
359	34.0	12.8	1.9	chr16	89699978	89700193	(638152)	C	MIRb	SINE/MIR	(13)	255	13	1541695
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
297	29.9	15.6	0.2	chr17	602561	602724	(82654717)	+	MIRc	SINE/MIR	1	203	(65)	1545432
329	39.6	5.6	1.0	chr17	1322130	1322333	(81935108)	C	MIRc	SINE/MIR	(53)	215	2	1546846
637	11.6	1.1	3.2	chr17	1322394	1322488	(81934953)	+	AluSz6	SINE/Alu	77	169	(143)	1546847
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
15	29.9	4.1	0.0	chr17	2399596	2399668	(80857773)	+	(GGCCCG)n	Simple_repeat	1	76	(0)	1549021
14	8.1	0.0	3.6	chr17	2593500	2593572	(80663869)	+	(GCCCG)n	Simple_repeat	1	70	(0)	1549530
30	0.0	0.0	0.0	chr17	2593591	2593618	(80663823)	+	(GGC)n	Simple_repeat	1	28	(0)	1549531
14	7.8	3.5	3.3	chr17	2593667	2593695	(80663746)	+	(GCG)n	Simple_repeat	1	30	(0)	1549532
468	33.6	8.5	0.9	chr17	3888400	3888627	(79368814)	+	MIR	SINE/MIR	16	262	(0)	1551942
22	5.6	8.1	0.0	chr17	3888906	3888942	(79368499)	+	(GT)n	Simple_repeat	1	40	(0)	1551943
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
1913	9.8	1.8	0.0	chr17	4730911	4731186	(78526255)	+	AluSx1	SINE/Alu	15	295	(17)	1553636
842	22.1	3.4	0.0	chr17	5526645	5526816	(77730625)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	1555315
484	27.6	10.6	4.5	chr17	6940667	6941082	(76316359)	+	L1ME3B	LINE/L1	5926	6242	(0)	1557930
2360	14.7	15.2	0.0	chr17	6947859	6948288	(76309153)	+	LTR54	LTR/ERV1	1	507	(3)	1557949
13	15.9	2.6	5.0	chr17	7014818	7014856	(76242585)	+	(GCG)n	Simple_repeat	1	40	(0)	1558088
17	26.0	4.1	1.9	chr17	7014959	7015034	(76242407)	+	G-rich	Low_complexity	1	77	(0)	1558089
31	28.2	2.5	1.6	chr17	7561967	7562077	(75695364)	+	(GGC)n	Simple_repeat	1	145	(0)	1559082
13	20.8	0.0	0.0	chr17	7562078	7562110	(75695331)	+	(GCGGC)n	Simple_repeat	1	33	(0)	1559083
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
650	1.4	0.0	0.0	chr17	8220869	8220940	(75036501)	C	tRNA-Trp-TGG	tRNA	(3)	72	1	1560357
779	1.2	0.0	0.0	chr17	8226607	8226691	(75030750)	C	tRNA-Ser-TCY	tRNA	(0)	85	1	1560366
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
4156	13.4	7.3	0.6	chr17	11908402	11909062	(71348379)	C	LTR62	LTR/ERVL	(0)	709	1	1567241
2648	19.6	1.6	2.3	chr17	13345936	13346495	(69910946)	C	MER74A	LTR/ERVL	(0)	558	3	1569624
16	8.2	0.0	0.0	chr17	13601837	13601862	(69655579)	+	(GGCTG)n	Simple_repeat	1	26	(0)	1570038
243	10.8	0.0	0.0	chr17	14335155	14335191	(68922250)	C	MIR3	SINE/MIR	(63)	145	109	1571250
2296	14.8	5.3	0.2	chr17	14522551	14522963	(68734478)	C	LTR47A	LTR/ERVL	(17)	435	1	1571597
993	20.4	0.9	9.4	chr17	14522971	14523224	(68734217)	C	MER4B-int	LTR/ERV1	(687)	6071	5840	1571598
3183	10.8	1.6	0.0	chr17	14604819	14605243	(68652198)	+	MER57A1	LTR/ERV1	1	432	(0)	1571729
1542	13.1	5.4	0.6	chr17	15526930	15527239	(67730202)	+	LTR54	LTR/ERV1	1	376	(134)	1573217
312	25.6	36.0	1.7	chr17	15883657	15883837	(67373604)	+	L1ME4b	LINE/L1	254	496	(396)	1573820
454	31.9	10.3	0.4	chr17	15883904	15884139	(67373302)	C	MIR	SINE/MIR	(0)	262	1	1573821
13	16.9	3.0	0.0	chr17	16380872	16380904	(66876537)	+	GA-rich	Low_complexity	1	34	(0)	1574857
585	19.0	2.0	0.0	chr17	16418945	16419044	(66838397)	+	AluSz6	SINE/Alu	197	298	(14)	1574952
551	26.1	24.1	0.0	chr17	17281616	17281799	(65975642)	+	MIR	SINE/MIR	29	256	(6)	1576335
240	31.8	0.0	0.0	chr17	17303051	17303113	(65954328)	+	L2b	LINE/L2	3238	3300	(75)	1576398
21	26.2	4.5	1.1	chr17	17303357	17303444	(65953997)	+	(CGCGCGC)n	Simple_repeat	1	92	(0)	1576399
543	25.9	21.5	0.7	chr17	17417445	17417724	(65839717)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	201	1576638
874	19.1	4.9	11.6	chr17	17417825	17417876	(65839565)	+	MLT1H	LTR/ERVL-MaLR	20	65	(484)	1576639
3383	14.5	8.8	4.6	chr17	17417877	17418549	(65838892)	+	LTR62	LTR/ERVL	3	706	(3)	1576640
21	29.5	0.0	5.7	chr17	17477089	17477193	(65780248)	+	(GCCGCC)n	Simple_repeat	1	105	(0)	1576739
289	33.4	14.9	1.9	chr17	17835886	17836193	(65421248)	+	L2b	LINE/L2	3003	3357	(18)	1577444
1469	14.6	8.2	1.0	chr17	18816348	18816746	(64440695)	C	LTR54	LTR/ERV1	(3)	431	1	1579185
253	25.6	10.6	7.0	chr17	18856137	18856308	(64401133)	C	MLT1K	LTR/ERVL-MaLR	(266)	329	151	1579268
1979	1.4	0.0	0.0	chr17	19112420	19112636	(64144805)	C	U3	snRNA	(0)	217	1	1579881
2265	9.2	0.0	2.2	chr17	20801817	20802131	(62455310)	+	AluYm1	SINE/Alu	1	308	(3)	1583130
6343	19.9	6.0	7.2	chr17	27088524	27090532	(56166909)	+	REP522	Satellite/telo	1	1983	(0)	1586174
3515	13.9	6.2	1.5	chr17	27106621	27107224	(56150217)	C	MER41B	LTR/ERV1	(0)	634	1	1586194
225	18.2	0.0	0.0	chr17	27107931	27107974	(56149467)	C	MER41B	LTR/ERV1	(4)	630	587	1586196
1761	9.1	0.4	0.0	chr17	27107970	27108223	(56149218)	C	LTR8A	LTR/ERV1	(472)	255	1	1586195
4052	14.5	0.8	2.3	chr17	27345338	27345964	(55911477)	C	LTR9D	LTR/ERV1	(0)	645	26	1586578
738	14.5	0.8	4.0	chr17	27567314	27567437	(55690004)	+	FLAM_C	SINE/Alu	5	124	(19)	1587058
4148	15.3	0.8	0.5	chr17	27575049	27575680	(55681761)	C	MER41B	LTR/ERV1	(0)	634	1	1587068
203	30.4	3.7	9.7	chr17	27575681	27575701	(55681740)	+	L2c	LINE/L2	3376	3393	(33)	1587067
1569	23.3	12.9	0.5	chr17	27575796	27576217	(55681224)	C	MLT1E2	LTR/ERVL-MaLR	(8)	619	138	1587069
289	21.6	0.0	0.0	chr17	27603141	27603191	(55654250)	C	MER81	DNA/hAT-Blackjack	(38)	76	26	1587121
352	30.5	1.5	5.2	chr17	27908001	27908082	(55349359)	C	MIRb	SINE/MIR	(10)	258	179	1587646
4498	9.4	2.7	2.8	chr17	27908083	27908524	(55348917)	+	MER41B	LTR/ERV1	1	452	(182)	1587647
1916	23.2	4.8	0.9	chr17	28029176	28029618	(55227823)	+	LTR16C	LTR/ERVL	1	461	(28)	1587945
250	34.5	1.8	3.5	chr17	28034332	28034445	(55222996)	C	Plat_L3	LINE/CR1	(542)	3044	2933	1587959
603	26.2	4.3	2.2	chr17	28034648	28034830	(55222611)	C	MIRb	SINE/MIR	(25)	243	57	1587960
20	25.6	3.7	0.9	chr17	28041410	28041481	(55215960)	+	A-rich	Low_complexity	1	74	(0)	1587976
13	16.2	2.7	2.6	chr17	28041431	28041467	(55215974)	+	GA-rich	Low_complexity	1	38	(0)	1587977
14	29.9	0.0	6.1	chr17	28645063	28645144	(54612297)	+	(CCCGG)n	Simple_repeat	1	82	(0)	1589065
16	20.6	0.0	2.4	chr17	28662211	28662251	(54595190)	+	(GCG)n	Simple_repeat	1	41	(0)	1589101
1067	5.5	0.0	0.0	chr17	28719633	28719760	(54537681)	+	AluYh3	SINE/Alu	142	269	(42)	1589196
30	0.0	3.1	0.0	chr17	28719764	28719795	(54537646)	+	(AAAACAA)n	Simple_repeat	1	33	(0)	1589197
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
18	10.5	0.0	0.0	chr17	29294512	29294543	(53962898)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1590289
16	24.8	4.3	2.7	chr17	30378664	30378733	(52878708)	+	GA-rich	Low_complexity	1	73	(0)	1592484
16	23.0	0.0	7.7	chr17	32444481	32444545	(50812896)	+	(CGG)n	Simple_repeat	1	65	(0)	1596845
634	22.5	0.0	0.7	chr17	33667631	33667773	(49589668)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	364	1599102
1957	26.1	4.7	0.4	chr17	33667848	33668272	(49589169)	+	LTR75_1	LTR/ERV1	56	501	(45)	1599103
386	28.2	9.2	7.3	chr17	33908254	33908498	(49348943)	+	MLT1O	LTR/ERVL-MaLR	147	396	(146)	1599543
3122	11.8	0.9	0.9	chr17	33931087	33931549	(49325892)	C	LTR2	LTR/ERV1	(0)	463	1	1599585
546	25.7	16.1	4.9	chr17	34413367	34413673	(48843768)	C	L2c	LINE/L2	(2)	3385	3038	1600338
45	6.0	0.0	0.0	chr17	34413694	34413745	(48843696)	+	(GT)n	Simple_repeat	1	52	(0)	1600339
386	25.4	0.8	3.0	chr17	34885233	34885366	(48372075)	C	hAT-N1_Mam	DNA/hAT-Tip100?	(78)	262	132	1601270
314	26.0	9.7	3.0	chr17	34887166	34887300	(48370141)	C	LTR88b	LTR/Gypsy?	(24)	813	669	1601274
702	25.6	10.6	0.5	chr17	34982003	34982214	(48275227)	C	MIR	SINE/MIR	(0)	262	27	1601464
18	23.6	0.0	0.0	chr17	35587383	35587428	(47670013)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	1602448
29	14.9	0.0	7.7	chr17	36545398	36545475	(46711966)	+	(GGCG)n	Simple_repeat	1	78	(0)	1604134
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
19	22.2	1.9	0.0	chr17	36948809	36948860	(46308581)	+	(CGCGCA)n	Simple_repeat	1	53	(0)	1604977
2203	10.3	0.7	0.0	chr17	38861122	38861412	(44396029)	+	AluSx	SINE/Alu	1	293	(19)	1608755
652	2.7	0.0	0.0	chr17	38861683	38861755	(44395686)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608756
564	31.5	14.6	4.8	chr17	39002984	39003755	(44253686)	+	L2	LINE/L2	1602	2472	(947)	1609094
838	9.1	11.2	1.4	chr17	39014134	39014172	(44243269)	+	MER21A	LTR/ERVL	1	41	(890)	1609126
4351	12.1	1.4	4.1	chr17	39014173	39014879	(44242562)	+	LTR8	LTR/ERV1	1	688	(3)	1609127
270	27.4	0.0	0.0	chr17	39281119	39281180	(43976261)	+	Chap1_Mam	DNA/hAT-Charlie	195	256	(86)	1609692
2223	17.1	5.2	1.0	chr17	39325872	39326279	(43931162)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1609801
10597	5.0	1.4	0.5	chr17	39333171	39334488	(43922953)	+	SVA_B	Retroposon/SVA	54	1383	(0)	1609821
15	19.8	5.6	1.8	chr17	39667519	39667572	(43589869)	+	(CCTGCC)n	Simple_repeat	1	57	(0)	1610552
21	18.0	1.9	1.9	chr17	40341547	40341598	(42915843)	+	G-rich	Low_complexity	1	53	(0)	1611854
3711	7.9	0.4	0.0	chr17	40372447	40372915	(42884526)	C	LTR7C	LTR/ERV1	(0)	471	1	1611906
3469	4.9	3.8	0.5	chr17	40372997	40373425	(42884016)	+	MLT2A1	LTR/ERVL	1	444	(0)	1611907
214	24.1	17.1	2.2	chr17	41738204	41738292	(41519149)	C	MIRc	SINE/MIR	(49)	219	115	1614171
2728	16.4	11.6	4.9	chr17	42108329	42108899	(41148542)	+	LTR18B	LTR/ERVL	1	614	(0)	1614962
2354	5.5	2.0	0.7	chr17	42155250	42155542	(41101899)	C	AluSx	SINE/Alu	(15)	297	1	1615041
7285	12.3	3.6	3.7	chr17	42266967	42267676	(40989765)	+	Tigger3b	DNA/TcMar-Tigger	2	713	(518)	1615276
2362	7.5	1.3	2.3	chr17	42314848	42315154	(40942287)	C	AluSc8	SINE/Alu	(6)	305	2	1615353
2035	13.6	1.6	0.0	chr17	42318959	42319259	(40938182)	+	AluSz	SINE/Alu	1	306	(6)	1615359
2337	11.0	0.0	0.0	chr17	42319260	42319568	(40937873)	+	AluSz	SINE/Alu	1	309	(3)	1615360
2293	7.4	2.0	3.6	chr17	42458284	42458592	(40798849)	+	AluSg	SINE/Alu	1	304	(6)	1615701
17	9.3	2.8	2.7	chr17	42458826	42458861	(40798580)	+	(GCGGGG)n	Simple_repeat	1	37	(0)	1615702
2928	11.8	2.4	0.2	chr17	42535068	42535524	(40721917)	C	MER41B	LTR/ERV1	(167)	467	1	1615833
434	30.2	8.0	4.7	chr17	42535586	42536003	(40721438)	+	L2c	LINE/L2	2938	3387	(0)	1615843
2039	8.1	0.7	0.0	chr17	42561315	42561586	(40695855)	C	AluSp	SINE/Alu	(35)	278	5	1615898
197	16.9	7.1	2.6	chr17	42561692	42561760	(40695681)	+	MIR1_Amn	SINE/MIR	121	195	(73)	1615899
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
223	33.0	0.0	0.0	chr17	42566580	42566667	(40690774)	C	L2b	LINE/L2	(40)	3335	3248	1615905
19	28.9	5.4	0.0	chr17	42833431	42833522	(40423919)	+	(GCGA)n	Simple_repeat	1	97	(0)	1616449
17	15.5	0.0	0.0	chr17	42964656	42964684	(40292757)	+	A-rich	Low_complexity	1	29	(0)	1616764
3928	10.0	0.2	0.0	chr17	43352269	43352788	(39904653)	C	MER41C	LTR/ERV1	(0)	521	1	1617616
3905	10.1	0.7	0.0	chr17	43352789	43353333	(39904108)	C	PRIMA41-int	LTR/ERV1	(0)	7756	7208	1617616
2093	13.5	2.6	4.4	chr17	43944864	43945207	(39312234)	C	THE1D	LTR/ERVL-MaLR	(34)	347	1	1618895
1431	14.8	2.5	0.0	chr17	43945255	43945490	(39311951)	+	MER41B	LTR/ERV1	1	242	(392)	1618897
15	29.9	0.0	0.0	chr17	44138450	44138488	(39118953)	+	(CA)n	Simple_repeat	1	39	(0)	1619307
12	22.4	3.5	5.1	chr17	44200421	44200477	(39056964)	+	(CTCCC)n	Simple_repeat	1	59	(0)	1619434
253	28.1	3.0	0.0	chr17	44503775	44503838	(38753603)	+	MIR	SINE/MIR	2	67	(195)	1620073
247	29.6	12.6	0.0	chr17	44503842	44503973	(38753468)	C	L2a	LINE/L2	(61)	3365	3215	1620074
2511	6.8	0.3	0.0	chr17	45152268	45152574	(38104867)	C	AluSp	SINE/Alu	(5)	308	1	1621438
15	23.3	0.0	0.0	chr17	45228978	45229017	(38028424)	+	GA-rich	Low_complexity	1	40	(0)	1621646
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
249	34.5	5.6	1.8	chr17	45345630	45345800	(37911641)	C	MamRep434	DNA/TcMar-Tigger	(99)	327	150	1621862
386	32.5	0.0	0.8	chr17	45867830	45867950	(37389491)	C	MLT1I	LTR/ERVL-MaLR	(251)	160	41	1622939
4947	10.2	2.2	1.2	chr17	45867960	45868643	(37388798)	+	LTR8	LTR/ERV1	1	691	(0)	1622940
26	14.0	0.0	0.0	chr17	46795835	46795881	(36461560)	+	(CTCTCT)n	Simple_repeat	1	47	(0)	1624731
47	0.0	0.0	0.0	chr17	46836096	46836135	(36421306)	+	(GT)n	Simple_repeat	1	40	(0)	1624810
317	32.9	5.3	4.5	chr17	47288746	47289009	(35968432)	C	L2c	LINE/L2	(38)	3349	3084	1625736
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
11	24.0	2.6	0.0	chr17	48254915	48254953	(35002488)	+	(TTTTGT)n	Simple_repeat	1	40	(0)	1627541
17	0.0	0.0	0.0	chr17	48488998	48489016	(34768425)	+	(A)n	Simple_repeat	1	19	(0)	1627972
14	6.9	9.7	0.0	chr17	48547552	48547584	(34709857)	+	GA-rich	Low_complexity	1	36	(0)	1628082
4579	9.7	2.2	1.0	chr17	48825536	48825977	(34431464)	C	MER41B	LTR/ERV1	(184)	450	1	1628573
495	29.0	7.1	0.0	chr17	48826001	48826169	(34431272)	+	MIRb	SINE/MIR	20	201	(67)	1628576
3820	10.5	2.1	0.4	chr17	49076572	49077089	(34180352)	C	MER41B	LTR/ERV1	(107)	527	1	1629162
822	24.3	3.8	1.0	chr17	49077101	49077304	(34180137)	C	LTR108e_Mam	LTR/ERVL	(28)	520	311	1629165
26	0.0	0.0	0.0	chr17	49230741	49230765	(34026676)	+	(GGAGCC)n	Simple_repeat	1	25	(0)	1629472
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
265	26.0	5.5	3.1	chr17	50208563	50208666	(33048775)	+	MIRb	SINE/MIR	77	184	(24)	1631315
14	12.7	0.0	0.0	chr17	50208846	50208871	(33048570)	+	(GACA)n	Simple_repeat	1	26	(0)	1631316
2463	15.3	1.8	2.9	chr17	50448504	50448953	(32808488)	C	MER65A	LTR/ERV1	(0)	445	1	1631806
239	20.4	5.0	9.6	chr17	50448989	50449008	(32808433)	C	L1MD3	LINE/L1	(2064)	5931	5910	1631807
2288	12.3	0.0	0.0	chr17	50449009	50449316	(32808125)	C	AluSx1	SINE/Alu	(4)	308	1	1631808
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
17	18.8	0.0	10.7	chr17	51120903	51120977	(32136464)	+	G-rich	Low_complexity	1	75	(0)	1633162
489	25.6	12.2	3.4	chr17	51121167	51121344	(32136097)	C	MIRc	SINE/MIR	(18)	250	55	1633163
1338	25.1	7.4	3.5	chr17	51372515	51372940	(31884501)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	1	1633649
364	29.8	3.4	1.3	chr17	51372965	51373131	(31884310)	+	L1ME3Cz	LINE/L1	5645	5797	(327)	1633650
2161	12.7	19.4	0.7	chr17	55432554	55432967	(27824474)	C	LTR54	LTR/ERV1	(0)	510	1	1639622
1906	22.0	13.9	0.8	chr17	56876664	56877131	(26380310)	C	LTR75	LTR/ERVL	(23)	539	1	1642157
30	26.3	1.1	1.7	chr17	57256433	57256521	(26000920)	+	G-rich	Low_complexity	1	88	(0)	1642979
15	21.8	5.7	0.0	chr17	57379497	57379511	(25877930)	+	(TTCTTTC)n	Simple_repeat	1	56	(0)	1643179
15	19.1	5.3	3.3	chr17	58084143	58084199	(25173242)	+	(GGCC)n	Simple_repeat	1	60	(0)	1644418
726	26.2	14.3	0.0	chr17	58492986	58493206	(24764235)	C	MIR	SINE/MIR	(1)	261	4	1645092
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2383	4.6	0.4	0.7	chr17	59209539	59209839	(24047602)	C	AluSq2	SINE/Alu	(0)	313	9	1646700
18	14.9	0.0	0.0	chr17	59209850	59209880	(24047561)	+	(T)n	Simple_repeat	1	31	(0)	1646701
5602	9.5	3.5	2.8	chr17	59290107	59290917	(23966524)	C	LTR5_Hs	LTR/ERVK	(151)	817	1	1646915
2277	9.4	0.3	1.6	chr17	59290952	59291258	(23966183)	C	AluSq2	SINE/Alu	(10)	303	1	1646916
2140	13.4	0.0	0.0	chr17	59788207	59788512	(23468929)	+	AluSg4	SINE/Alu	1	306	(4)	1647944
2263	7.3	0.0	0.4	chr17	59842395	59842669	(23414772)	+	AluSx	SINE/Alu	1	274	(38)	1648068
2077	11.9	0.0	0.0	chr17	59842843	59843145	(23414296)	C	AluSx1	SINE/Alu	(0)	312	5	1648069
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
4052	10.4	1.9	2.1	chr17	62143664	62143828	(21113613)	+	MER61E	LTR/ERV1	1	161	(408)	1652362
2278	8.5	0.0	2.9	chr17	62143829	62144135	(21113306)	+	AluSg	SINE/Alu	1	298	(12)	1652363
646	11.8	0.0	1.1	chr17	62171314	62171407	(21086034)	C	AluSx	SINE/Alu	(14)	298	206	1652429
865	13.7	0.0	0.0	chr17	62171408	62171531	(21085910)	C	AluSx	SINE/Alu	(188)	124	1	1652429
4012	14.4	1.6	2.5	chr17	62634599	62634826	(20622615)	C	MER41B	LTR/ERV1	(405)	229	1	1653400
2263	12.3	0.0	0.0	chr17	62634831	62635130	(20622311)	C	AluSx	SINE/Alu	(12)	300	1	1653402
1620	6.7	8.4	2.2	chr17	63433051	63433273	(19824168)	C	AluY	SINE/Alu	(10)	301	64	1654707
261	26.5	1.7	5.2	chr17	63460088	63460206	(19797235)	+	L2b	LINE/L2	3054	3166	(221)	1654738
3681	8.7	2.7	3.6	chr17	63460261	63460786	(19796655)	+	MER41C	LTR/ERV1	1	521	(0)	1654739
204	19.7	10.7	0.7	chr17	63600570	63600633	(19656808)	+	MIR3	SINE/MIR	91	159	(103)	1655007
1035	17.5	7.3	6.1	chr17	64599118	64599348	(18658093)	C	MIR	SINE/MIR	(26)	236	3	1656877
2033	14.4	1.5	0.0	chr17	64599479	64599812	(18657629)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1656878
13	29.4	1.2	6.0	chr17	64919291	64919373	(18338068)	+	G-rich	Low_complexity	1	84	(0)	1657593
15	28.8	1.9	6.5	chr17	64975604	64975708	(18281733)	+	(ACGCC)n	Simple_repeat	1	107	(0)	1657692
17	30.2	1.1	4.4	chr17	68247975	68248063	(15009378)	+	(GGCGC)n	Simple_repeat	1	90	(0)	1663830
15	14.8	2.4	4.8	chr17	68512499	68512539	(14744902)	+	(CGC)n	Simple_repeat	1	42	(0)	1664337
1917	12.9	6.7	7.2	chr17	69047321	69047419	(14210022)	C	THE1C	LTR/ERVL-MaLR	(0)	375	280	1665147
3084	12.2	9.2	2.5	chr17	69047420	69047973	(14209468)	+	LTR4	LTR/ERV1	1	595	(1)	1665148
254	31.1	8.5	5.1	chr17	69103484	69103778	(14153663)	+	HAL1ME	LINE/L1	114	419	(2046)	1665218
2291	11.2	5.0	1.8	chr17	70128762	70129144	(13128297)	C	MER48	LTR/ERV1	(11)	396	1	1666837
4945	8.5	0.2	0.2	chr17	72762083	72762715	(10494726)	+	MER41B	LTR/ERV1	2	634	(0)	1670966
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
655	14.2	10.2	0.0	chr17	74296412	74296517	(8960924)	C	AluJr	SINE/Alu	(194)	118	1	1673877
2760	20.6	4.0	0.4	chr17	74296518	74297068	(8960373)	C	L1M4	LINE/L1	(6943)	574	3	1673866
192	29.9	1.5	1.5	chr17	74463369	74463436	(8794005)	+	L3	LINE/CR1	2022	2089	(2010)	1674203
58	30.2	1.8	9.6	chr17	74514143	74514815	(8742626)	+	(TGACAGG)n	Simple_repeat	1	685	(0)	1674300
2314	12.5	0.0	0.0	chr17	74714840	74715152	(8542289)	+	AluSq2	SINE/Alu	1	313	(0)	1674694
800	13.9	6.7	5.7	chr17	74876368	74876514	(8380927)	+	MER20	DNA/hAT-Charlie	42	194	(25)	1674921
2236	10.5	0.3	0.3	chr17	74876515	74876809	(8380632)	+	AluSx1	SINE/Alu	1	295	(17)	1674922
15	24.3	3.8	0.0	chr17	75456678	75456730	(7800711)	+	GA-rich	Low_complexity	1	55	(0)	1676192
403	35.8	1.3	0.0	chr17	75571273	75571423	(7686018)	+	MIRb	SINE/MIR	36	188	(80)	1676387
29	33.6	0.8	0.8	chr17	76453009	76453132	(6804309)	+	G-rich	Low_complexity	1	125	(0)	1678054
22	22.0	4.3	1.4	chr17	76453163	76453232	(6804209)	+	(GGC)n	Simple_repeat	1	73	(0)	1678055
2818	13.1	3.6	0.0	chr17	76601713	76602163	(6655278)	C	MER41B	LTR/ERV1	(166)	468	1	1678372
2326	11.0	0.0	1.0	chr17	76602300	76602608	(6654833)	+	AluSx1	SINE/Alu	1	306	(6)	1678373
249	5.9	0.0	0.0	chr17	76671636	76671669	(6585772)	+	Alu	SINE/Alu	1	34	(99)	1678524
1833	7.3	13.4	0.1	chr17	77087688	77088029	(6169412)	C	MER41A	LTR/ERV1	(165)	469	3	1679418
278	32.6	14.0	0.0	chr17	77088042	77088176	(6169265)	C	L3	LINE/CR1	(2256)	1843	1687	1679419
758	16.5	0.0	0.0	chr17	77109279	77109399	(6148042)	C	AluJr	SINE/Alu	(187)	125	5	1679472
1527	16.3	6.2	9.5	chr17	77109400	77109649	(6147792)	C	LTR54	LTR/ERV1	(259)	251	1	1679471
12	23.2	0.0	4.5	chr17	77140636	77140679	(6116762)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1679537
299	31.2	6.1	10.7	chr17	77233707	77233997	(6023444)	+	MLT1J2	LTR/ERVL-MaLR	135	448	(0)	1679691
238	23.8	0.0	16.5	chr17	77234120	77234240	(6023201)	C	L2a	LINE/L2	(469)	2950	2850	1679690
2350	10.4	0.0	0.0	chr17	77324820	77325116	(5932325)	C	AluSx1	SINE/Alu	(13)	299	3	1679882
1534	21.3	4.3	3.7	chr17	77325117	77325351	(5932090)	C	L1M4	LINE/L1	(978)	5168	4943	1679881
53	0.0	0.0	0.0	chr17	78254749	78254793	(5002648)	+	(GT)n	Simple_repeat	1	45	(0)	1681498
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
244	23.5	4.2	0.0	chr17	78301337	78301404	(4956037)	+	MIR3	SINE/MIR	106	176	(32)	1681601
497	25.4	4.6	2.6	chr17	78758774	78758963	(4498478)	+	LTR40c	LTR/ERVL	217	410	(55)	1682397
953	18.7	0.0	0.0	chr17	78758968	78759117	(4498324)	+	AluJr	SINE/Alu	148	297	(15)	1682398
2373	8.9	1.0	0.0	chr17	78987376	78987679	(4269762)	C	AluSx3	SINE/Alu	(4)	307	1	1682820
1706	25.1	2.0	5.6	chr17	78987680	78987775	(4269666)	C	L1ME1	LINE/L1	(2273)	3873	3782	1682804
3259	12.9	6.0	1.5	chr17	78987776	78987939	(4269502)	+	MER41A	LTR/ERV1	1	171	(383)	1682821
2312	10.3	0.0	0.0	chr17	78987940	78988241	(4269200)	+	AluSg	SINE/Alu	1	302	(8)	1682822
864	20.7	6.5	2.5	chr17	79011382	79011619	(4245822)	C	L1ME3D	LINE/L1	(95)	6147	5900	1682844
4410	12.1	1.9	0.2	chr17	79011645	79012265	(4245176)	+	MER41B	LTR/ERV1	3	634	(0)	1682845
467	32.7	4.9	3.1	chr17	80254896	80255154	(3002287)	+	L1ME3G	LINE/L1	308	571	(353)	1684750
732	11.3	8.6	0.0	chr17	80575188	80575293	(2682148)	C	AluJr	SINE/Alu	(195)	117	2	1685247
433	22.7	9.8	11.3	chr17	80575294	80575441	(2682000)	C	L1ME3B	LINE/L1	(3191)	2955	2792	1685241
288	25.5	3.1	0.0	chr17	80575470	80575563	(2681878)	+	MER91C	DNA/hAT-Tip100	30	126	(14)	1685248
13	20.5	0.0	2.8	chr17	81346367	81346402	(1911039)	+	G-rich	Low_complexity	1	36	(0)	1686143
318	31.8	16.4	1.1	chr17	81665674	81665854	(1591587)	+	MIRb	SINE/MIR	45	258	(10)	1686612
235	25.3	14.6	0.0	chr17	81665925	81666070	(1591371)	+	L2	LINE/L2	113	283	(3136)	1686613
36	25.6	2.4	5.4	chr17	81927535	81927698	(1329743)	+	G-rich	Low_complexity	1	168	(0)	1686917
15	0.0	0.0	0.0	chr17	81927701	81927719	(1329722)	+	(CCG)n	Simple_repeat	1	19	(0)	1686918
13	12.1	3.6	0.0	chr17	81977766	81977793	(1279648)	+	G-rich	Low_complexity	1	29	(0)	1687002
469	17.1	27.9	0.0	chr17	82206285	82206488	(1050953)	+	MER21A	LTR/ERVL	1	264	(667)	1687329
11	14.8	4.9	4.7	chr17	82273465	82273505	(983936)	+	(CTCCGG)n	Simple_repeat	1	43	(0)	1687397
21	13.1	0.0	4.3	chr17	82273724	82273769	(983672)	+	(GGCGG)n	Simple_repeat	1	46	(0)	1687398
4176	10.1	8.1	0.0	chr17	82344952	82345557	(911884)	+	PABL_A	LTR/ERV1	1	659	(1)	1687515
13	0.0	0.0	0.0	chr17	82458441	82458457	(798984)	+	(GCC)n	Simple_repeat	1	17	(0)	1687667
29	18.7	0.0	4.1	chr17	82648451	82648523	(608918)	+	(CGTG)n	Simple_repeat	1	73	(0)	1688030
156	18.1	1.6	0.6	chr17	82648573	82648887	(608554)	+	G-rich	Low_complexity	1	320	(0)	1688031
19	21.2	0.0	2.0	chr17	83051904	83051954	(205487)	+	(GGCGG)n	Simple_repeat	1	51	(0)	1688528
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
1763	15.5	4.1	6.3	chr18	650349	650631	(79722654)	C	L1MB3	LINE/L1	(0)	6183	5897	1690177
568	12.5	0.0	0.0	chr18	650632	650711	(79722574)	C	AluJb	SINE/Alu	(3)	309	230	1690178
1763	15.5	4.1	6.3	chr18	650712	650917	(79722368)	C	L1MB3	LINE/L1	(0)	5896	5687	1690177
242	27.5	6.4	4.4	chr18	711865	712001	(79661284)	C	MIR3	SINE/MIR	(58)	150	11	1690297
1391	16.9	1.2	3.8	chr18	831877	832141	(79541144)	C	MER44B	DNA/TcMar-Tigger	(0)	550	293	1690553
3583	7.4	2.6	0.0	chr18	874031	874487	(79498798)	C	MER41A	LTR/ERV1	(85)	469	1	1690658
11097	8.2	1.9	2.5	chr18	874488	876030	(79497255)	C	MER41-int	LTR/ERV1	(2)	5944	4411	1690658
2416	10.9	0.0	0.3	chr18	968429	968731	(79404554)	C	AluSx	SINE/Alu	(9)	303	2	1690805
2305	13.2	0.0	0.3	chr18	987329	987671	(79385614)	C	L1PA16	LINE/L1	(261)	5905	5564	1690820
1633	11.9	0.4	0.4	chr18	987674	987910	(79385375)	C	MER41E	LTR/ERV1	(353)	242	6	1690818
2584	3.8	1.0	0.0	chr18	1407048	1407340	(78965945)	+	AluY	SINE/Alu	1	296	(15)	1691335
2002	14.4	0.3	2.0	chr18	1465344	1465641	(78907644)	C	AluJb	SINE/Alu	(15)	297	5	1691416
2486	7.6	1.3	0.0	chr18	1508917	1509219	(78864066)	C	AluY	SINE/Alu	(4)	307	1	1691472
2455	5.5	0.7	0.0	chr18	3038341	3038632	(77334653)	+	AluY	SINE/Alu	1	294	(17)	1693657
1819	15.4	0.0	3.4	chr18	3038635	3038926	(77334359)	C	AluJb	SINE/Alu	(30)	282	1	1693658
255	30.5	5.9	5.0	chr18	3042424	3042657	(77330628)	+	MIRc	SINE/MIR	20	253	(15)	1693664
838	23.7	3.4	1.3	chr18	3178200	3178440	(77194845)	C	MIR	SINE/MIR	(20)	242	3	1693909
434	35.8	2.0	0.7	chr18	3258854	3259002	(77114283)	+	MIRb	SINE/MIR	8	158	(110)	1694038
270	20.1	23.3	2.0	chr18	3259036	3259238	(77114047)	+	MIR	SINE/MIR	8	265	(3)	1694039
418	21.3	12.2	6.5	chr18	3604749	3604964	(76768321)	+	MER112	DNA/hAT-Charlie	5	234	(27)	1694735
476	31.2	24.9	2.8	chr18	3607712	3608050	(76765235)	+	MLT1L	LTR/ERVL-MaLR	2	411	(199)	1694741
456	34.6	3.6	7.9	chr18	3664547	3664838	(76708447)	+	L2b	LINE/L2	3096	3374	(1)	1694859
1836	16.7	2.3	2.3	chr18	6926637	6926936	(73446349)	+	AluJb	SINE/Alu	1	300	(12)	1699250
656	24.2	9.7	0.0	chr18	6927461	6927609	(73445676)	+	AluJr	SINE/Alu	140	304	(8)	1699251
2128	23.9	6.6	9.0	chr18	8892823	8893188	(71480097)	+	L1ME4b	LINE/L1	350	680	(212)	1702061
2131	15.8	5.7	0.3	chr18	8893189	8893555	(71479730)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	1702064
1993	15.1	5.4	3.1	chr18	8933610	8934124	(71439161)	C	LTR8B	LTR/ERV1	(237)	583	1	1702113
18	22.0	0.0	0.0	chr18	8934163	8934199	(71439086)	+	A-rich	Low_complexity	1	37	(0)	1702115
1248	19.2	0.0	0.5	chr18	8934242	8934454	(71438831)	C	LTR24	LTR/ERV1	(0)	467	256	1702116
2254	8.9	0.0	0.3	chr18	9007223	9007535	(71365750)	C	AluY	SINE/Alu	(0)	311	1	1702254
7282	4.8	0.1	1.6	chr18	9007536	9008169	(71365116)	+	L1PA5	LINE/L1	5528	6152	(2)	1702253
1528	21.8	0.3	4.8	chr18	9008381	9008704	(71364581)	+	MER2	DNA/TcMar-Tigger	1	309	(36)	1702256
3723	11.7	1.2	1.4	chr18	9008705	9009267	(71364018)	C	LTR73	LTR/ERV1	(0)	572	11	1702257
250	12.8	0.0	0.0	chr18	9009275	9009313	(71363972)	+	MER2B	DNA/TcMar-Tigger	298	336	(0)	1702258
2155	11.2	0.3	1.0	chr18	9009364	9009659	(71363626)	+	AluSp	SINE/Alu	1	294	(19)	1702259
2753	12.8	9.5	2.2	chr18	9016734	9016919	(71356366)	C	LTR64	LTR/ERV1	(338)	190	2	1702275
601	19.1	13.8	2.5	chr18	9102016	9102214	(71271071)	C	L1MC5	LINE/L1	(0)	9304	9080	1702462
276	30.6	9.7	0.0	chr18	9615348	9615468	(70757817)	+	MIRb	SINE/MIR	135	268	(0)	1703336
7322	22.1	3.3	2.2	chr18	9680715	9682523	(70690762)	C	L1M4b	LINE/L1	(5256)	1611	15	1703483
1486	14.1	0.0	3.0	chr18	9803225	9803458	(70569827)	C	AluJo	SINE/Alu	(1)	311	85	1703691
1585	13.4	5.8	0.4	chr18	9825812	9826089	(70547196)	+	L1PA16	LINE/L1	5864	6157	(9)	1703714
2096	25.0	9.3	1.8	chr18	9829061	9829995	(70543290)	C	L1ME3B	LINE/L1	(9)	6233	5174	1703719
337	27.5	17.1	2.5	chr18	9849472	9850083	(70523202)	C	L2a	LINE/L2	(0)	3375	2665	1703746
3282	11.8	5.8	1.0	chr18	9877166	9877678	(70495607)	+	LTR45C	LTR/ERV1	1	539	(0)	1703791
641	30.1	7.6	0.4	chr18	9878592	9878871	(70494414)	+	L1M5	LINE/L1	5522	5823	(301)	1703793
581	17.9	8.6	0.0	chr18	9878884	9878989	(70494296)	+	MER58A	DNA/hAT-Charlie	1	116	(108)	1703794
1932	17.6	1.3	5.9	chr18	9879001	9879404	(70493881)	C	MLT1B	LTR/ERVL-MaLR	(5)	385	1	1703795
210	27.5	16.6	2.2	chr18	9885822	9885955	(70487330)	+	MIR	SINE/MIR	23	179	(83)	1703809
12	32.1	0.0	3.3	chr18	9900912	9900972	(70472313)	+	(GAGAT)n	Simple_repeat	1	61	(0)	1703838
1746	13.6	3.0	5.8	chr18	11953451	11953759	(68419526)	C	AluJb	SINE/Alu	(12)	300	1	1706656
13	28.8	0.0	4.7	chr18	12377343	12377406	(67995879)	+	G-rich	Low_complexity	1	64	(0)	1707303
579	22.5	17.0	3.2	chr18	12622025	12622272	(67751013)	+	Tigger13a	DNA/TcMar-Tigger	3	291	(480)	1707795
2642	4.3	0.0	0.3	chr18	12622422	12622722	(67750563)	C	AluY	SINE/Alu	(11)	300	1	1707796
12913	8.7	1.4	6.2	chr18	21735088	21738525	(58634760)	+	L1P2	LINE/L1	3	3400	(3061)	1713214
474	10.7	2.6	0.0	chr18	22467915	22467989	(57905296)	C	MER44B	DNA/TcMar-Tigger	(23)	527	451	1714602
1369	17.6	4.5	0.0	chr18	22467987	22468241	(57905044)	C	MER44B	DNA/TcMar-Tigger	(284)	266	1	1714602
1925	16.5	9.3	1.9	chr18	22468269	22468645	(57904640)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1714603
1137	14.9	0.5	0.0	chr18	22468689	22468896	(57904389)	C	L1M1	LINE/L1	(7294)	271	63	1714604
428	26.6	1.7	5.0	chr18	22485811	22485929	(57887356)	C	L2c	LINE/L2	(0)	3387	3273	1714625
265	37.4	12.2	5.1	chr18	22557387	22557953	(57815332)	C	L2	LINE/L2	(377)	3042	2430	1714709
12	4.3	8.3	0.0	chr18	22934307	22934330	(57438955)	+	(TGTTT)n	Simple_repeat	1	26	(0)	1715237
831	20.2	7.3	0.0	chr18	23231249	23231426	(57141859)	C	MER3	DNA/hAT-Charlie	(17)	192	1	1715842
24	9.9	0.0	4.3	chr18	23586972	23587018	(56786267)	+	(GGCGG)n	Simple_repeat	1	47	(0)	1716473
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
13	13.1	0.0	0.0	chr18	25185493	25185517	(55187768)	+	(TAA)n	Simple_repeat	1	25	(0)	1719024
2541	8.3	0.0	3.5	chr18	25873573	25873886	(54499399)	+	AluY	SINE/Alu	1	303	(8)	1719940
650	18.3	4.0	0.0	chr18	25873898	25874017	(54499268)	+	Tigger7	DNA/TcMar-Tigger	174	298	(2193)	1719941
2145	14.9	3.7	0.6	chr18	25874008	25874371	(54498914)	+	Tigger7	DNA/TcMar-Tigger	2116	2491	(0)	1719942
1792	21.9	18.7	7.7	chr18	31821645	31822323	(48550962)	+	LTR19C	LTR/ERV1	7	777	(2)	1728255
215	26.3	2.6	2.6	chr18	35344651	35344728	(45028557)	C	MIRc	SINE/MIR	(18)	250	173	1733186
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
4657	9.1	0.6	1.6	chr18	46161722	46162235	(34211050)	C	MER41B	LTR/ERV1	(118)	516	2	1748151
29	0.0	0.0	0.0	chr18	46250492	46250516	(34122769)	+	(AC)n	Simple_repeat	1	25	(0)	1748324
368	35.5	14.0	5.4	chr18	46250517	46250805	(34122480)	+	L2b	LINE/L2	2637	2959	(460)	1748321
655	3.9	2.5	0.0	chr18	48940752	48940828	(31432457)	+	AluSz6	SINE/Alu	225	303	(9)	1752702
4220	7.0	1.4	3.2	chr18	48962049	48962487	(31410798)	C	MER41A	LTR/ERV1	(111)	443	1	1752728
2681	11.1	1.5	0.8	chr18	50372774	50373164	(30000121)	C	MER57B1	LTR/ERV1	(0)	401	8	1755027
20	21.3	1.6	3.1	chr18	56638607	56638669	(23734616)	+	G-rich	Low_complexity	1	64	(0)	1764412
2660	13.3	3.4	1.4	chr18	62449992	62450424	(17922861)	C	MER65A	LTR/ERV1	(3)	442	1	1773474
4494	6.4	0.7	0.7	chr18	74188903	74189456	(6183829)	C	MER41A	LTR/ERV1	(0)	554	1	1789542
1431	29.5	14.0	2.3	chr18	74189457	74189623	(6183662)	+	L2	LINE/L2	2672	2846	(573)	1789541
12	13.2	5.7	2.7	chr18	74496247	74496281	(5877004)	+	(GTGGC)n	Simple_repeat	1	37	(0)	1789971
12	23.6	0.0	9.2	chr18	79069339	79069403	(1303882)	+	G-rich	Low_complexity	1	65	(0)	1795141
915	24.6	6.0	4.5	chr18	79413275	79413649	(959636)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	9	1795485
12	21.1	0.0	0.0	chr18	79784063	79784091	(589194)	+	GA-rich	Low_complexity	1	29	(0)	1795770
20	29.1	1.2	2.4	chr18	79951541	79951623	(421662)	+	(CCGCCCC)n	Simple_repeat	1	84	(0)	1795926
12	16.3	7.0	2.2	chr18	79988584	79988626	(384659)	+	(CGTG)n	Simple_repeat	1	46	(0)	1795993
12	20.1	0.0	5.1	chr19	382885	382923	(58234693)	+	A-rich	Low_complexity	1	39	(0)	1796839
295	20.0	7.1	0.0	chr19	383081	383145	(58234471)	+	Tigger3	DNA/TcMar-Tigger	64	133	(2896)	1796840
14	14.7	8.9	0.0	chr19	531346	531391	(58086225)	+	(CCGCGCC)n	Simple_repeat	1	50	(0)	1797096
13	8.8	0.0	3.9	chr19	572575	572600	(58045016)	+	(GCG)n	Simple_repeat	1	26	(0)	1797176
336	31.0	3.7	3.1	chr19	907483	907642	(57709974)	C	MIRb	SINE/MIR	(93)	175	15	1797858
244	35.8	3.4	0.9	chr19	925385	925516	(57692100)	C	MIRc	SINE/MIR	(106)	162	25	1797903
307	23.1	7.1	0.0	chr19	944135	944212	(57673404)	C	L2b	LINE/L2	(18)	3357	3274	1797940
29	15.9	0.0	0.0	chr19	944326	944374	(57673242)	+	(GT)n	Simple_repeat	1	49	(0)	1797941
843	25.3	5.4	5.7	chr19	958903	959139	(57658477)	+	Tigger3a	DNA/TcMar-Tigger	88	324	(24)	1797973
529	25.9	7.8	5.8	chr19	959116	959268	(57658348)	+	MLT1D	LTR/ERVL-MaLR	190	376	(129)	1797975
606	18.3	8.5	1.7	chr19	983161	983280	(57634336)	+	AluJo	SINE/Alu	1	129	(183)	1798029
482	30.2	4.1	6.5	chr19	996695	996849	(57620767)	+	L1MB3	LINE/L1	5429	5586	(594)	1798042
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
2230	9.1	0.0	2.9	chr19	1075234	1075540	(57542076)	C	AluSx	SINE/Alu	(10)	302	5	1798183
1192	18.3	3.7	0.9	chr19	1075606	1075818	(57541798)	C	AluJo	SINE/Alu	(4)	308	90	1798184
575	14.7	1.6	10.1	chr19	1241392	1241549	(57376067)	C	FLAM_C	SINE/Alu	(90)	212	7	1798452
11	14.8	4.9	4.7	chr19	1261060	1261100	(57356516)	+	(AGCGCGG)n	Simple_repeat	1	43	(0)	1798477
24	14.8	1.9	1.8	chr19	1275563	1275616	(57342000)	+	(TGCTGC)n	Simple_repeat	1	55	(0)	1798487
29	3.2	0.0	0.0	chr19	1275918	1275949	(57341667)	+	(CCCT)n	Simple_repeat	1	32	(0)	1798488
13	12.1	7.9	2.4	chr19	1325363	1325400	(57292216)	+	(GCG)n	Simple_repeat	1	41	(0)	1798581
671	1.4	0.0	0.0	chr19	1383362	1383434	(57234182)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1798705
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
22	10.7	8.0	0.0	chr19	1407283	1407349	(57210267)	+	(CGCA)n	Simple_repeat	1	72	(0)	1798747
189	32.6	2.2	0.0	chr19	1438118	1438212	(57179404)	C	MIR3	SINE/MIR	(80)	182	83	1798779
288	31.8	1.6	0.8	chr19	1542670	1542796	(57074820)	C	MamRep1527	LTR	(486)	483	356	1798977
184	20.0	0.0	4.3	chr19	1542901	1542947	(57074669)	C	MIRc	SINE/MIR	(103)	165	121	1798978
19	26.3	3.7	2.4	chr19	1652614	1652694	(56964922)	+	(CCGCG)n	Simple_repeat	1	84	(0)	1799198
265	39.4	1.4	1.4	chr19	1847903	1848046	(56769570)	C	MIRb	SINE/MIR	(34)	234	91	1799617
2034	6.8	8.3	0.0	chr19	1897324	1897588	(56720028)	C	AluY	SINE/Alu	(20)	291	3	1799708
14	8.3	0.0	3.6	chr19	1905230	1905257	(56712359)	+	(CGGGG)n	Simple_repeat	1	28	(0)	1799731
13	14.0	4.7	4.4	chr19	1940696	1940738	(56676878)	+	(CGCCGC)n	Simple_repeat	1	45	(0)	1799810
26	22.9	3.2	6.2	chr19	2702783	2702901	(55914715)	+	G-rich	Low_complexity	1	115	(0)	1801483
355	32.8	0.8	5.2	chr19	2703057	2703191	(55914425)	C	MIRb	SINE/MIR	(43)	225	97	1801484
407	32.5	7.6	4.0	chr19	2711511	2711931	(55905685)	+	L2b	LINE/L2	2978	3426	(0)	1801514
189	33.1	10.2	4.6	chr19	2722926	2723055	(55894561)	+	MIRb	SINE/MIR	47	184	(84)	1801529
1814	21.5	6.2	0.0	chr19	2776246	2776686	(55840930)	+	L1MB3	LINE/L1	5682	6151	(32)	1801635
2682	2.9	0.7	0.3	chr19	2900006	2900314	(55717302)	+	AluY	SINE/Alu	1	310	(1)	1801886
369	29.6	2.3	0.0	chr19	2962110	2962234	(55655382)	+	L1ME1	LINE/L1	6039	6166	(13)	1802025
256	21.1	8.4	0.0	chr19	3133596	3133696	(55483920)	+	MIR	SINE/MIR	33	146	(122)	1802465
2093	13.4	0.0	4.4	chr19	3183667	3183788	(55433828)	C	AluJo	SINE/Alu	(202)	110	1	1802585
2347	9.8	0.0	0.0	chr19	3306972	3307276	(55310340)	+	AluSx1	SINE/Alu	2	306	(6)	1802892
657	21.9	9.2	1.1	chr19	3450839	3451018	(55166598)	+	MER58A	DNA/hAT-Charlie	1	196	(28)	1803324
802	24.2	7.6	0.0	chr19	3451109	3451339	(55166277)	+	L1MB7	LINE/L1	5791	6040	(144)	1803325
506	31.9	5.9	0.0	chr19	3520966	3521253	(55096363)	C	L1MB5	LINE/L1	(273)	5901	5596	1803471
767	18.2	2.8	6.9	chr19	3521362	3521506	(55096110)	+	L1MB3	LINE/L1	5975	6122	(61)	1803472
2356	18.9	4.7	0.0	chr19	3568810	3569254	(55048362)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1803553
48	28.8	2.8	2.8	chr19	3669944	3670155	(54947461)	+	G-rich	Low_complexity	1	218	(0)	1803740
757	27.6	10.8	3.4	chr19	3670220	3670631	(54946985)	+	MLT1C	LTR/ERVL-MaLR	7	452	(15)	1803741
226	27.4	6.7	6.7	chr19	3763129	3763218	(54854398)	+	MIR3	SINE/MIR	21	110	(98)	1803981
28	20.5	5.4	2.0	chr19	3971044	3971136	(54646480)	+	(GCC)n	Simple_repeat	1	98	(0)	1804459
137	0.0	0.0	0.0	chr19	4247583	4247698	(54369918)	+	(GT)n	Simple_repeat	1	116	(0)	1805151
231	15.8	0.0	0.0	chr19	4247706	4247743	(54369873)	C	MER68B	LTR/ERVL	(300)	264	227	1805152
626	21.2	0.8	0.0	chr19	4247746	4247863	(54369753)	C	MER68B	LTR/ERVL	(288)	276	158	1805152
213	30.4	1.2	6.0	chr19	4471377	4471460	(54146156)	C	MIR1_Amn	SINE/MIR	(66)	164	85	1805673
206	19.1	4.1	0.0	chr19	4471503	4471549	(54146067)	+	L2b	LINE/L2	3326	3374	(1)	1805674
21	27.1	4.2	2.0	chr19	4472226	4472321	(54145295)	+	(CTCCCG)n	Simple_repeat	1	100	(0)	1805675
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
2537	23.5	12.9	0.6	chr19	4840968	4841605	(53776011)	+	L1MB7	LINE/L1	5441	6174	(10)	1806632
2149	29.5	5.9	1.9	chr19	5139207	5139794	(53477822)	C	L1MB1	LINE/L1	(280)	5888	5279	1807237
11	21.0	2.5	2.4	chr19	5687402	5687441	(52930175)	+	G-rich	Low_complexity	1	41	(0)	1808589
1865	16.8	2.0	0.0	chr19	5791398	5791695	(52825921)	C	AluJr	SINE/Alu	(8)	304	1	1808845
12	13.5	7.1	6.7	chr19	5827828	5827883	(52789733)	+	(GCGGCG)n	Simple_repeat	1	60	(0)	1808950
31	4.7	2.2	2.1	chr19	6279823	6279868	(52337748)	+	(CGC)n	Simple_repeat	1	47	(0)	1809796
28	0.0	0.0	0.0	chr19	6279885	6279910	(52337706)	+	(CGC)n	Simple_repeat	1	26	(0)	1809796
15	12.0	0.0	0.0	chr19	6279913	6279939	(52337677)	+	(CCCG)n	Simple_repeat	1	27	(0)	1809797
655	23.1	6.2	7.6	chr19	6372211	6372265	(52245351)	C	L1MC5	LINE/L1	(230)	9074	9015	1810084
23	18.3	4.7	1.5	chr19	6424702	6424765	(52192851)	+	(GGC)n	Simple_repeat	1	67	(0)	1810203
326	20.7	5.9	0.3	chr19	6536237	6536333	(52081283)	+	MLT1O	LTR/ERVL-MaLR	112	250	(345)	1810505
1880	9.5	7.4	0.0	chr19	6602481	6602744	(52014872)	+	AluSx1	SINE/Alu	2	286	(26)	1810684
2790	16.8	7.4	7.8	chr19	6602745	6602943	(52014673)	+	LTR9	LTR/ERV1	302	494	(118)	1810683
1903	14.2	0.0	4.5	chr19	6736087	6736397	(51881219)	C	AluJr	SINE/Alu	(15)	297	1	1811026
401	31.6	10.3	0.9	chr19	6736398	6736568	(51881048)	C	MIRb	SINE/MIR	(58)	210	23	1811025
16	23.5	1.5	4.5	chr19	7830142	7830206	(50787410)	+	G-rich	Low_complexity	1	66	(0)	1813826
297	29.2	0.0	3.2	chr19	8005998	8006113	(50611503)	+	MIRc	SINE/MIR	47	155	(53)	1814132
332	21.6	15.7	0.0	chr19	8006182	8006283	(50611333)	C	L2a	LINE/L2	(2)	3424	3304	1814133
3817	11.9	1.4	6.8	chr19	8033232	8033694	(50583922)	C	LTR19B	LTR/ERV1	(140)	440	1	1814222
913	11.7	1.9	7.2	chr19	8033696	8033861	(50583755)	C	HERVFH19-int	LTR/ERV1	(1)	7718	7562	1814222
2490	7.9	0.0	0.0	chr19	8033898	8034200	(50583416)	C	AluY	SINE/Alu	(8)	303	1	1814224
1707	17.9	0.0	3.5	chr19	8418488	8418829	(50198787)	C	AluJr	SINE/Alu	(0)	312	1	1815265
1636	27.3	8.0	2.2	chr19	8688850	8689573	(49928043)	C	L1ME4b	LINE/L1	(159)	733	2	1815931
686	27.0	4.4	5.3	chr19	9139913	9140213	(49477403)	C	L1MC4	LINE/L1	(578)	7464	7167	1816897
430	25.0	6.0	2.1	chr19	9140307	9140449	(49477167)	+	LTR33B	LTR/ERVL	77	225	(278)	1816898
1655	16.4	1.6	1.3	chr19	9769071	9769380	(48848236)	C	AluJr	SINE/Alu	(0)	312	2	1818054
967	15.4	1.2	0.0	chr19	9788166	9788327	(48829289)	C	AluJo	SINE/Alu	(12)	300	137	1818109
1984	14.3	0.0	0.0	chr19	9788374	9788673	(48828943)	C	AluJb	SINE/Alu	(11)	301	2	1818110
13	16.8	0.0	5.4	chr19	9835104	9835140	(48782476)	+	G-rich	Low_complexity	1	37	(0)	1818234
16	21.6	3.1	4.5	chr19	9835271	9835334	(48782282)	+	(GGCGGC)n	Simple_repeat	1	66	(0)	1818235
16	15.7	2.1	6.1	chr19	10289848	10289895	(48327721)	+	(CGC)n	Simple_repeat	1	49	(0)	1819380
466	25.5	2.4	2.2	chr19	10425264	10425436	(48192180)	+	MIRc	SINE/MIR	40	214	(54)	1819702
14	15.9	0.0	0.0	chr19	10568987	10569014	(48048602)	+	(CGC)n	Simple_repeat	1	28	(0)	1820117
214	34.7	4.8	0.8	chr19	10747618	10747736	(47869880)	C	L2b	LINE/L2	(3)	3372	3249	1820593
554	27.6	3.1	5.6	chr19	10754884	10755052	(47862564)	C	L1ME3	LINE/L1	(62)	6100	5936	1820612
631	29.1	2.0	0.5	chr19	10755079	10755278	(47862338)	+	L1ME2	LINE/L1	5651	5853	(311)	1820614
245	29.8	11.6	0.8	chr19	10813008	10813138	(47804478)	+	MIR	SINE/MIR	16	165	(103)	1820742
11	20.6	5.1	0.0	chr19	10813215	10813253	(47804363)	+	(CTGAGTG)n	Simple_repeat	1	41	(0)	1820743
74	18.4	4.3	2.6	chr19	10871450	10871775	(47745841)	+	(CGG)n	Simple_repeat	1	331	(0)	1820887
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
2047	12.5	1.0	0.3	chr19	11564352	11564646	(47052970)	C	AluSx	SINE/Alu	(11)	301	5	1822666
1093	18.4	3.2	0.1	chr19	11564647	11564860	(47052756)	+	MER34	LTR/ERV1	323	587	(0)	1822663
20	7.0	0.0	0.0	chr19	11564899	11564928	(47052688)	+	(TGCT)n	Simple_repeat	1	30	(0)	1822667
1379	14.8	0.3	13.9	chr19	11564930	11565260	(47052356)	C	AluJb	SINE/Alu	(26)	286	1	1822668
12	16.4	7.8	3.6	chr19	11578557	11578607	(47039009)	+	(CCTG)n	Simple_repeat	1	55	(0)	1822701
2540	4.4	0.3	0.3	chr19	12682007	12682304	(45935312)	C	AluYc	SINE/Alu	(0)	299	2	1824985
38	8.5	0.0	0.0	chr19	12722562	12722612	(45895004)	+	(A)n	Simple_repeat	1	51	(0)	1825078
19	17.9	0.0	2.2	chr19	12775556	12775601	(45842015)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1825188
2838	1.0	0.0	0.0	chr19	12775871	12776176	(45841440)	C	AluYe5	SINE/Alu	(4)	306	1	1825189
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
16	29.8	1.6	0.0	chr19	12806495	12806555	(45811061)	+	(GCAGCG)n	Simple_repeat	1	62	(0)	1825249
1270	18.7	7.0	0.4	chr19	12882516	12882756	(45734860)	C	AluJb	SINE/Alu	(12)	300	43	1825444
3404	15.1	7.2	8.2	chr19	12882804	12882934	(45734682)	+	LTR8A	LTR/ERV1	1	132	(595)	1825445
1905	10.6	0.7	8.1	chr19	12882935	12883255	(45734361)	C	AluSz	SINE/Alu	(15)	297	1	1825446
2032	6.9	6.5	0.7	chr19	12945235	12945509	(45672107)	+	AluSx1	SINE/Alu	1	292	(20)	1825593
19	0.0	2.9	5.7	chr19	13154187	13154222	(45463394)	+	(TGTT)n	Simple_repeat	1	35	(0)	1825987
2460	6.0	0.0	3.1	chr19	13157994	13158310	(45459306)	C	AluY	SINE/Alu	(4)	307	1	1825997
1899	21.2	4.9	1.8	chr19	13672267	13672546	(44945070)	+	MLT1C	LTR/ERVL-MaLR	181	467	(0)	1827452
540	25.3	8.6	1.3	chr19	13672634	13672814	(44944802)	+	MLT1J	LTR/ERVL-MaLR	32	199	(313)	1827454
2053	12.9	0.4	0.0	chr19	13672815	13673119	(44944497)	C	AluSx	SINE/Alu	(0)	312	3	1827455
3338	9.1	7.0	10.0	chr19	14009261	14009418	(44608198)	+	MER41A	LTR/ERV1	1	158	(396)	1828317
2025	13.8	0.3	0.0	chr19	14009419	14009699	(44607917)	+	AluSx1	SINE/Alu	1	282	(30)	1828318
38	24.6	2.6	4.5	chr19	14117527	14117677	(44499939)	+	(GGC)n	Simple_repeat	1	155	(0)	1828625
13	24.8	0.0	3.9	chr19	14136937	14136987	(44480629)	+	(GCAGCGC)n	Simple_repeat	1	51	(0)	1828672
47	0.0	0.0	0.0	chr19	14381266	14381305	(44236311)	+	(GT)n	Simple_repeat	1	40	(0)	1829360
250	24.6	13.7	0.0	chr19	14391233	14391332	(44226284)	+	MIR	SINE/MIR	1	113	(155)	1829388
745	14.8	0.0	0.9	chr19	14391373	14391480	(44226136)	+	AluJr	SINE/Alu	17	123	(189)	1829389
1599	15.2	0.0	4.8	chr19	14391482	14391750	(44225866)	+	AluJb	SINE/Alu	41	296	(16)	1829390
437	24.1	4.4	0.0	chr19	14574332	14574439	(44043177)	C	MER91C	DNA/hAT-Tip100	(27)	113	1	1829832
363	26.1	7.3	3.2	chr19	14574496	14574653	(44042963)	+	MIR3	SINE/MIR	18	182	(26)	1829833
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
14	21.2	0.0	7.1	chr19	15379968	15380023	(43237593)	+	(GCCCC)n	Simple_repeat	1	56	(0)	1831697
13	24.8	0.0	5.7	chr19	15449777	15449829	(43167787)	+	G-rich	Low_complexity	1	53	(0)	1831818
28	22.6	3.7	0.0	chr19	15449851	15449932	(43167684)	+	(TGCCGC)n	Simple_repeat	1	85	(0)	1831819
22	15.4	0.0	0.0	chr19	15450047	15450082	(43167534)	+	(C)n	Simple_repeat	1	36	(0)	1831820
1224	22.6	0.3	0.3	chr19	15825552	15825858	(42791758)	+	L1M4	LINE/L1	4741	5047	(1099)	1832590
1002	14.2	7.6	7.2	chr19	15825860	15826094	(42791522)	+	LTR54B	LTR/ERV1	1	236	(262)	1832592
3697	5.8	1.7	0.0	chr19	15828738	15829200	(42788416)	+	LTR7C	LTR/ERV1	1	471	(0)	1832598
2083	11.1	0.0	0.4	chr19	16259123	16259402	(42358214)	+	AluSg4	SINE/Alu	1	279	(31)	1833512
905	18.1	0.0	0.0	chr19	16315904	16316047	(42301569)	+	AluJo	SINE/Alu	137	280	(32)	1833694
36	0.0	0.0	0.0	chr19	16316051	16316081	(42301535)	+	(AC)n	Simple_repeat	1	31	(0)	1833695
14	11.7	0.0	3.3	chr19	16572409	16572445	(42045171)	+	(GCGGG)n	Simple_repeat	1	35	(0)	1834225
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
1240	22.0	4.4	0.7	chr19	16828935	16829240	(41788376)	C	MER58B	DNA/hAT-Charlie	(0)	341	24	1834920
13	11.9	2.3	8.9	chr19	16897842	16897885	(41719731)	+	G-rich	Low_complexity	1	45	(0)	1835033
289	25.5	3.5	0.3	chr19	17074880	17074980	(41542636)	+	MIR3	SINE/MIR	83	199	(69)	1835436
233	27.2	13.5	4.4	chr19	17075046	17075226	(41542390)	C	MIRb	SINE/MIR	(36)	226	27	1835437
579	13.8	11.2	4.3	chr19	17215131	17215246	(41402370)	C	AluJr	SINE/Alu	(187)	125	1	1835760
198	28.9	6.7	2.4	chr19	17310216	17310300	(41307316)	+	MIR	SINE/MIR	133	221	(41)	1836000
231	36.2	6.1	2.5	chr19	17333841	17334044	(41283572)	+	L2c	LINE/L2	2916	3127	(260)	1836047
659	26.1	10.0	1.0	chr19	17334054	17334254	(41283362)	C	MIR	SINE/MIR	(6)	256	36	1836048
1237	13.6	0.5	1.1	chr19	17336339	17336529	(41281087)	+	AluJb	SINE/Alu	120	309	(3)	1836058
201	20.4	2.2	0.0	chr19	17336676	17336719	(41280897)	+	MamTip2	DNA/hAT-Tip100	100	144	(161)	1836059
382	32.4	9.2	0.0	chr19	17336833	17337039	(41280577)	C	L2b	LINE/L2	(158)	3217	2990	1836060
13	16.9	4.8	2.3	chr19	17351861	17351902	(41265714)	+	(GTGTCT)n	Simple_repeat	1	44	(0)	1836097
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
211	25.0	0.0	3.5	chr19	17680601	17680658	(40936958)	+	MIR1_Amn	SINE/MIR	117	172	(58)	1836991
15	12.8	2.6	5.0	chr19	17680660	17680698	(40936918)	+	(CCT)n	Simple_repeat	1	40	(0)	1836992
11	27.2	3.0	4.3	chr19	18203943	18204009	(40413607)	+	(TGGCGG)n	Simple_repeat	1	69	(0)	1838358
15	11.2	3.5	0.0	chr19	18203982	18204010	(40413606)	+	(GGC)n	Simple_repeat	1	30	(0)	1838359
12	23.3	0.0	0.0	chr19	18292355	18292389	(40325227)	+	G-rich	Low_complexity	1	35	(0)	1838555
2154	14.1	0.0	0.3	chr19	18365338	18365643	(40251973)	C	AluJb	SINE/Alu	(7)	305	1	1838731
11	16.9	2.9	2.8	chr19	18388462	18388496	(40229120)	+	(GCGCCT)n	Simple_repeat	1	36	(0)	1838793
2297	8.6	2.9	0.0	chr19	18416014	18416314	(40201302)	C	AluSx1	SINE/Alu	(2)	310	1	1838864
881	18.0	0.6	1.9	chr19	18416317	18416477	(40201139)	C	AluJb	SINE/Alu	(17)	295	137	1838865
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
364	27.8	6.5	0.9	chr19	18417204	18417319	(40200297)	+	L2c	LINE/L2	3260	3382	(5)	1838866
217	26.3	4.8	9.2	chr19	18417406	18417514	(40200102)	+	MIRc	SINE/MIR	23	126	(142)	1838867
1926	9.2	5.9	5.9	chr19	18590215	18590518	(40027098)	C	AluSz6	SINE/Alu	(6)	306	3	1839179
16	14.8	0.0	4.9	chr19	18636946	18636986	(39980630)	+	(CCCCG)n	Simple_repeat	1	41	(0)	1839290
13	33.5	1.6	1.6	chr19	18637038	18637100	(39980516)	+	(GCG)n	Simple_repeat	1	64	(0)	1839291
1760	23.4	10.5	1.5	chr19	19082114	19082375	(39535241)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	196	1840220
8024	7.7	1.6	0.0	chr19	21620224	21621240	(36996376)	C	LTR5A	LTR/ERVK	(0)	1033	1	1844322
1456	22.1	0.0	2.8	chr19	21621241	21621295	(36996321)	+	MER57E3	LTR/ERV1	358	407	(80)	1844321
2194	12.2	0.3	0.0	chr19	21621307	21621601	(36996015)	C	AluSp	SINE/Alu	(17)	296	1	1844323
2380	16.1	12.8	3.4	chr19	21697450	21697956	(36919660)	C	LTR6A	LTR/ERV1	(0)	564	3	1844404
522	10.6	0.0	0.0	chr19	21697958	21698023	(36919593)	+	AluSq10	SINE/Alu	232	297	(16)	1844405
690	15.9	6.2	1.1	chr19	21698045	21698223	(36919393)	+	MER83B-int	LTR/ERV1	4157	4312	(568)	1844406
2026	18.1	0.8	0.6	chr19	28475515	28475876	(30141740)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	1848827
4387	7.6	0.2	0.0	chr19	28522096	28522646	(30094970)	+	MER41A	LTR/ERV1	3	554	(0)	1848916
12670	12.0	3.3	1.4	chr19	28525895	28528650	(30088966)	+	PABL_A-int	LTR/ERV1	2332	5944	(2)	1848916
4370	8.0	0.0	0.7	chr19	28528651	28529205	(30088411)	+	MER41A	LTR/ERV1	1	551	(3)	1848916
414	36.2	9.2	1.9	chr19	28544655	28545065	(30072551)	+	MLT1K	LTR/ERVL-MaLR	72	515	(80)	1848943
435	26.1	5.1	0.0	chr19	28552890	28553019	(30064597)	+	MIRb	SINE/MIR	35	171	(97)	1848956
402	28.6	14.5	1.7	chr19	28606436	28606609	(30011007)	+	LTR2	LTR/ERV1	1	200	(263)	1849048
1522	12.0	0.5	0.0	chr19	28606630	28606838	(30010778)	+	LTR2	LTR/ERV1	292	501	(0)	1849048
25947	15.8	0.8	1.3	chr19	28613571	28614817	(30002799)	+	HERVE-int	LTR/ERV1	6549	7810	(3)	1849048
1527	22.0	7.8	6.4	chr19	28614818	28615273	(30002343)	+	LTR2	LTR/ERV1	1	463	(0)	1849048
2281	14.9	1.8	1.0	chr19	28646546	28646932	(29970684)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1849086
775	27.7	18.9	0.6	chr19	29687076	29687580	(28930036)	C	L2a	LINE/L2	(952)	2467	1849	1850634
3683	17.6	3.0	2.1	chr19	29687597	29687914	(28929702)	C	L1MB7	LINE/L1	(1)	6183	5876	1850638
266	28.1	12.6	4.0	chr19	32628529	32628702	(25988914)	C	MIRc	SINE/MIR	(45)	223	33	1855179
1105	11.6	3.6	1.0	chr19	32686829	32687020	(25930596)	C	LTR51	LTR/ERV1	(78)	593	397	1855306
451	7.8	3.0	0.0	chr19	32687022	32687085	(25930531)	+	MER41B	LTR/ERV1	1	66	(568)	1855307
615	12.3	19.7	0.0	chr19	32687086	32687199	(25930417)	+	LTR9	LTR/ERV1	1	142	(470)	1855308
404	24.2	5.0	1.6	chr19	33124642	33124769	(25492847)	C	MIR	SINE/MIR	(91)	171	47	1856227
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
1101	26.7	2.1	0.4	chr19	34919838	34920111	(23697505)	C	LTR16A	LTR/ERVL	(0)	451	173	1859333
6287	12.8	1.2	1.2	chr19	34920178	34921118	(23696498)	+	LTR5_Hs	LTR/ERVK	1	941	(27)	1859334
17	29.1	3.1	1.5	chr19	35000120	35000184	(23617432)	+	(TC)n	Simple_repeat	1	67	(0)	1859480
4497	9.9	3.9	0.2	chr19	35165102	35165711	(23451905)	C	MER41B	LTR/ERV1	(0)	634	1	1859854
1109	17.3	4.7	2.6	chr19	35165712	35165781	(23451835)	C	Tigger4a	DNA/TcMar-Tigger	(171)	65	1	1859853
897	18.6	4.7	0.0	chr19	35165817	35166045	(23451571)	C	L2a	LINE/L2	(310)	3116	2868	1859852
4376	7.0	1.3	0.0	chr19	35204673	35205219	(23412397)	C	MER41A	LTR/ERV1	(0)	554	1	1859931
555	25.1	10.3	1.4	chr19	35205270	35205548	(23412068)	C	L2b	LINE/L2	(195)	3231	2931	1859932
709	22.9	14.6	5.0	chr19	35220312	35220608	(23397008)	+	MLT1J1	LTR/ERVL-MaLR	11	321	(123)	1859971
3036	13.3	5.8	0.6	chr19	35220609	35221116	(23396500)	+	LTR45C	LTR/ERV1	1	536	(3)	1859972
281	31.8	11.4	0.8	chr19	35305540	35305672	(23311944)	+	MIR	SINE/MIR	47	195	(67)	1860142
2058	12.0	0.0	0.0	chr19	35305673	35305947	(23311669)	+	AluSz6	SINE/Alu	1	275	(37)	1860143
794	30.3	11.7	0.4	chr19	35317462	35317929	(23299687)	C	L2a	LINE/L2	(8)	3418	2880	1860170
27	3.4	0.0	0.0	chr19	35317930	35317959	(23299657)	+	(TTGT)n	Simple_repeat	1	30	(0)	1860171
27	3.4	0.0	0.0	chr19	35318036	35318065	(23299551)	+	(TTGT)n	Simple_repeat	1	30	(0)	1860172
334	29.8	12.7	4.9	chr19	35380681	35380938	(23236678)	C	MER102b	DNA/hAT-Charlie	(78)	253	1	1860286
25	21.7	2.3	4.5	chr19	35717916	35718005	(22899611)	+	(GCCCC)n	Simple_repeat	1	88	(0)	1861037
13	14.8	2.4	4.8	chr19	35995120	35995160	(22622456)	+	(GAGGCGG)n	Simple_repeat	1	42	(0)	1861643
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
1216	29.6	7.9	6.1	chr19	37550278	37551772	(21065844)	+	SST1	Satellite/centr	29	1552	(11)	1864656
702	27.4	7.4	9.5	chr19	38037053	38037495	(20580121)	C	L2b	LINE/L2	(19)	3356	2924	1865676
883	29.1	14.4	0.7	chr19	38122328	38123032	(20494584)	+	L2a	LINE/L2	2517	3354	(21)	1865895
763	22.2	4.7	3.9	chr19	38316961	38317170	(20300446)	C	Arthur1C	DNA/hAT-Tip100	(110)	253	41	1866380
18	23.5	2.2	0.0	chr19	38317189	38317233	(20300383)	+	(TC)n	Simple_repeat	1	46	(0)	1866382
213	26.5	16.4	0.3	chr19	38374243	38374355	(20243261)	+	MIR	SINE/MIR	18	155	(113)	1866528
12	4.1	3.5	6.7	chr19	38402967	38402995	(20214621)	+	(GGGGC)n	Simple_repeat	1	30	(0)	1866578
214	29.5	10.3	7.1	chr19	38681154	38681231	(19936385)	+	MIR	SINE/MIR	35	117	(145)	1867241
215	33.5	9.0	1.6	chr19	38681435	38681628	(19935988)	+	L2c	LINE/L2	2929	3138	(249)	1867240
5711	15.2	2.7	2.8	chr19	39258242	39259208	(19358408)	C	LTR13A	LTR/ERVK	(0)	966	1	1868683
60	24.3	4.3	4.1	chr19	39342375	39342630	(19274986)	+	(CGG)n	Simple_repeat	1	267	(0)	1868896
238	19.6	3.8	0.0	chr19	39382208	39382258	(19235358)	+	L2b	LINE/L2	3317	3369	(6)	1868974
17	27.4	2.2	5.3	chr19	39409702	39409793	(19207823)	+	G-rich	Low_complexity	1	94	(0)	1869013
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
658	16.8	21.8	0.0	chr19	39430840	39431000	(19186616)	C	MER6B	DNA/TcMar-Tigger	(4)	206	1	1869051
7602	5.9	1.9	3.1	chr19	39479462	39480441	(19137175)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1869167
12	20.0	0.0	2.8	chr19	40191451	40191486	(18426130)	+	G-rich	Low_complexity	1	36	(0)	1870440
348	27.0	9.8	2.2	chr19	40285799	40285943	(18331673)	+	MIR	SINE/MIR	15	177	(91)	1870652
628	32.2	7.7	2.1	chr19	40371170	40371451	(18246165)	C	L2b	LINE/L2	(0)	3375	3077	1870898
2074	11.7	0.0	0.7	chr19	40489387	40489685	(18127931)	C	AluSz	SINE/Alu	(13)	299	3	1871222
13	32.6	0.0	0.0	chr19	40602563	40602607	(18015009)	+	(CTCC)n	Simple_repeat	1	45	(0)	1871504
17	26.1	1.6	1.6	chr19	40799071	40799131	(17818485)	+	(CCCCG)n	Simple_repeat	1	62	(0)	1871992
7224	10.4	1.8	0.2	chr19	40822624	40823609	(17794007)	+	LTR5B	LTR/ERVK	1	1002	(0)	1872027
1058	28.9	11.8	5.0	chr19	41065020	41065405	(17552211)	+	MLT1J	LTR/ERVL-MaLR	6	435	(77)	1872531
286	22.5	15.8	7.4	chr19	41321887	41322035	(17295581)	C	MER20	DNA/hAT-Charlie	(55)	164	1	1873150
1745	15.0	1.7	0.7	chr19	41322106	41322391	(17295225)	C	AluJo	SINE/Alu	(23)	289	1	1873151
13	4.5	0.0	7.4	chr19	42075887	42075913	(16541703)	+	(GGA)n	Simple_repeat	1	27	(0)	1874519
198	35.0	17.3	0.0	chr19	42450167	42450343	(16167273)	+	L3	LINE/CR1	3782	3995	(104)	1875305
528	25.7	11.0	1.9	chr19	43475567	43475780	(15141836)	+	MIR	SINE/MIR	14	249	(13)	1876864
766	29.6	9.3	6.9	chr19	43701271	43701659	(14915957)	C	L2a	LINE/L2	(3)	3423	3025	1877470
1013	15.8	0.0	6.6	chr19	43701680	43701862	(14915754)	+	AluJr	SINE/Alu	1	171	(141)	1877471
12	8.4	0.0	6.9	chr19	43774647	43774675	(14842941)	+	(GGTCA)n	Simple_repeat	1	29	(0)	1877645
17	17.2	0.0	2.4	chr19	43774730	43774779	(14842837)	+	GA-rich	Low_complexity	1	48	(0)	1877646
447	22.6	4.7	0.0	chr19	43774859	43774960	(14842656)	C	L2a	LINE/L2	(16)	3410	3304	1877647
435	26.4	3.4	7.1	chr19	43775029	43775043	(14842573)	C	MIRb	SINE/MIR	(0)	268	255	1877648
2263	12.1	0.0	0.3	chr19	43775044	43775356	(14842260)	+	AluSz	SINE/Alu	1	312	(0)	1877649
2845	12.1	0.2	0.2	chr19	44587759	44588155	(14029461)	C	MER41B	LTR/ERV1	(107)	527	131	1879052
439	14.8	3.3	7.4	chr19	44588156	44588250	(14029366)	+	L1MDa	LINE/L1	1844	1934	(4699)	1879053
3782	7.6	0.0	0.0	chr19	44590476	44590938	(14026678)	+	LTR2	LTR/ERV1	1	463	(0)	1879062
13	19.6	0.0	0.0	chr19	44593959	44593988	(14023628)	+	(AATG)n	Simple_repeat	1	30	(0)	1879069
8934	1.4	0.0	0.0	chr19	44594096	44595063	(14022553)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1879070
2186	10.5	0.3	1.0	chr19	44695122	44695416	(13922200)	C	AluSx1	SINE/Alu	(19)	293	1	1879363
11	25.1	2.2	2.2	chr19	44753586	44753630	(13863986)	+	(ACCGGC)n	Simple_repeat	1	46	(0)	1879532
17	13.4	2.9	0.0	chr19	44891217	44891250	(13726366)	+	(GGC)n	Simple_repeat	1	35	(0)	1879899
2392	4.6	4.4	0.0	chr19	44915313	44915597	(13702019)	C	AluYc	SINE/Alu	(1)	298	1	1879954
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
817	24.5	4.4	0.0	chr19	45300480	45300675	(13316941)	C	MER58A	DNA/hAT-Charlie	(8)	216	12	1880944
688	24.1	6.9	0.3	chr19	45300687	45300945	(13316671)	C	MLT1K	LTR/ERVL-MaLR	(273)	322	114	1880945
22	8.4	2.6	0.0	chr19	45467617	45467654	(13149962)	+	(GCGCGG)n	Simple_repeat	1	39	(0)	1881401
17	19.0	2.4	0.0	chr19	45467655	45467663	(13149953)	+	(GCGC)n	Simple_repeat	1	48	(0)	1881402
207	30.2	4.0	5.8	chr19	45506393	45506517	(13111099)	+	MIR3	SINE/MIR	50	175	(33)	1881493
685	28.1	0.8	7.8	chr19	45585170	45585427	(13032189)	+	MIR	SINE/MIR	10	249	(13)	1881709
401	29.6	0.8	0.0	chr19	45632504	45632628	(12984988)	C	Charlie10	DNA/hAT-Charlie	(2664)	158	33	1881847
209	30.8	3.6	3.2	chr19	45667546	45667662	(12949954)	C	L2b	LINE/L2	(0)	3387	3241	1881953
16	0.0	0.0	0.0	chr19	45863114	45863133	(12754483)	+	(CCG)n	Simple_repeat	1	20	(0)	1882442
839	14.7	0.8	0.8	chr19	45887488	45887616	(12730000)	+	AluJr	SINE/Alu	179	307	(5)	1882488
591	24.4	5.2	2.4	chr19	45927752	45927919	(12689697)	+	LTR67B	LTR/ERVL	2	174	(446)	1882602
11	20.6	2.9	0.0	chr19	45999954	45999987	(12617629)	+	(GAGGCA)n	Simple_repeat	1	35	(0)	1882798
408	31.6	3.6	5.1	chr19	46416290	46416337	(12201279)	+	L2a	LINE/L2	2852	2898	(521)	1883602
15	0.0	0.0	0.0	chr19	46717082	46717100	(11900516)	+	(CGG)n	Simple_repeat	1	19	(0)	1884379
40	0.0	0.0	0.0	chr19	46791989	46792022	(11825594)	+	(CA)n	Simple_repeat	1	34	(0)	1884552
223	29.8	11.2	3.2	chr19	46792023	46792260	(11825356)	C	L2b	LINE/L2	(157)	3269	3019	1884550
571	18.2	7.2	4.1	chr19	46851218	46851338	(11766278)	C	AluJr4	SINE/Alu	(179)	133	9	1884739
197	26.8	10.9	1.2	chr19	47107311	47107393	(11510223)	C	MIRb	SINE/MIR	(28)	240	149	1885273
16	5.3	0.0	0.0	chr19	47107655	47107674	(11509942)	+	(A)n	Simple_repeat	1	20	(0)	1885274
17	18.7	3.3	4.8	chr19	47113141	47113200	(11504416)	+	(GAGGCG)n	Simple_repeat	1	62	(0)	1885281
218	33.9	9.7	3.0	chr19	47113944	47114077	(11503539)	C	MIRb	SINE/MIR	(57)	211	68	1885282
1950	13.2	1.4	0.3	chr19	47225361	47225655	(11391961)	C	AluJo	SINE/Alu	(13)	299	2	1885596
378	32.1	9.9	6.5	chr19	47225656	47226058	(11391558)	+	L1ME3Cz	LINE/L1	566	997	(0)	1885593
319	24.4	4.7	13.2	chr19	47315635	47315823	(11301793)	+	MamRep38	DNA/hAT	78	249	(46)	1885847
2370	9.3	0.3	0.6	chr19	47344760	47345072	(11272544)	C	AluSx	SINE/Alu	(0)	312	1	1885934
825	7.1	1.7	0.0	chr19	47345073	47345185	(11272431)	C	MER41B	LTR/ERV1	(519)	115	1	1885935
1168	11.8	0.0	0.0	chr19	47345186	47345355	(11272261)	C	MER41-int	LTR/ERV1	(2)	5944	5775	1885935
237	26.4	15.4	0.8	chr19	47351410	47351531	(11266085)	C	MLT1K	LTR/ERVL-MaLR	(43)	552	410	1885951
562	33.5	5.3	4.2	chr19	47351621	47351956	(11265660)	C	MLT1K	LTR/ERVL-MaLR	(245)	350	11	1885951
332	33.8	4.3	2.5	chr19	47352117	47352277	(11265339)	+	L2c	LINE/L2	3110	3273	(114)	1885942
2151	14.7	0.3	0.6	chr19	47352394	47352706	(11264910)	+	AluJo	SINE/Alu	1	312	(0)	1885952
14	22.7	2.0	3.9	chr19	47515119	47515168	(11102448)	+	(CGC)n	Simple_repeat	1	51	(0)	1886320
525	21.1	5.5	3.4	chr19	47891935	47892121	(10725495)	+	MER61E	LTR/ERV1	1	193	(586)	1887340
944	23.6	14.2	7.7	chr19	47892220	47892697	(10724919)	+	LTR27D	LTR/ERV1	147	781	(63)	1887341
1487	9.0	1.0	1.0	chr19	48254471	48254670	(10362946)	+	AluSx3	SINE/Alu	1	200	(111)	1888294
2155	15.2	6.5	3.7	chr19	48254703	48255085	(10362531)	+	MER65A	LTR/ERV1	3	406	(39)	1888295
2367	9.7	0.3	0.0	chr19	48291609	48291908	(10325708)	C	AluSx1	SINE/Alu	(11)	301	1	1888386
2020	13.5	0.3	2.0	chr19	48633819	48634122	(9983494)	+	AluSx1	SINE/Alu	1	299	(13)	1889248
294	27.2	6.4	0.0	chr19	48634137	48634239	(9983377)	C	MIR3	SINE/MIR	(25)	183	74	1889249
300	0.0	0.0	0.0	chr19	48634251	48634286	(9983330)	C	U2	snRNA	(152)	36	1	1889250
819	11.0	0.0	0.0	chr19	48882278	48882395	(9735221)	+	MER41B	LTR/ERV1	13	130	(504)	1889855
4069	6.2	0.0	0.0	chr19	48882411	48882938	(9734678)	C	LTR10C	LTR/ERV1	(0)	591	64	1889856
2314	6.8	0.0	2.0	chr19	48892499	48892790	(9724826)	C	AluYc	SINE/Alu	(13)	286	1	1889878
627	12.8	0.0	0.0	chr19	48892792	48892893	(9724723)	C	LTR5B	LTR/ERVK	(866)	102	1	1889877
325	6.7	0.0	0.0	chr19	48892894	48892938	(9724678)	+	Alu	SINE/Alu	251	295	(6)	1889879
837	12.5	0.0	1.7	chr19	48892968	48893087	(9724529)	+	AluJb	SINE/Alu	8	125	(187)	1889880
1138	16.2	2.1	0.0	chr19	48899753	48899937	(9717679)	+	AluJb	SINE/Alu	120	308	(4)	1889898
181	18.0	0.0	10.7	chr19	48954548	48954603	(9663013)	+	L2	LINE/L2	3019	3068	(351)	1890057
295	31.5	9.1	8.7	chr19	49113885	49114103	(9503513)	+	L2b	LINE/L2	3153	3372	(3)	1890404
368	33.8	7.0	1.8	chr19	49422761	49422923	(9194693)	+	L2b	LINE/L2	3204	3375	(0)	1891074
323	28.9	12.2	5.2	chr19	49578936	49579291	(9038325)	+	L1MC5a	LINE/L1	8716	9057	(247)	1891446
2218	15.6	13.3	0.2	chr19	49579292	49579734	(9037882)	+	LTR54	LTR/ERV1	1	510	(0)	1891461
12	14.1	3.0	2.9	chr19	49818246	49818278	(8799338)	+	(CGCGCG)n	Simple_repeat	1	34	(0)	1892011
382	29.1	5.5	3.4	chr19	49849776	49849953	(8767663)	+	L2	LINE/L2	2146	2327	(1092)	1892075
2355	10.5	1.0	0.0	chr19	49898042	49898346	(8719270)	+	AluSx	SINE/Alu	1	308	(4)	1892154
1886	10.2	5.0	0.4	chr19	49986907	49987172	(8630444)	C	AluSg4	SINE/Alu	(31)	279	1	1892352
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
18	17.7	2.1	4.0	chr19	50658137	50658185	(7959431)	+	G-rich	Low_complexity	1	48	(0)	1894034
216	30.4	1.7	2.5	chr19	50835919	50836036	(7781580)	C	MIRb	SINE/MIR	(27)	241	125	1894437
234	34.3	5.7	1.5	chr19	50878824	50879024	(7738592)	+	L1M5	LINE/L1	5660	5869	(325)	1894510
594	25.3	2.3	2.9	chr19	50879159	50879333	(7738283)	C	MER77	LTR/ERVL	(9)	595	422	1894511
547	20.1	2.7	8.7	chr19	51508040	51508235	(7109381)	+	MER53	DNA/hAT	1	184	(9)	1895752
3777	12.9	2.8	0.7	chr19	51547800	51548367	(7069249)	+	LTR19B	LTR/ERV1	1	580	(0)	1895800
673	25.9	0.9	5.6	chr19	51736327	51736559	(6881057)	+	MLT1C	LTR/ERVL-MaLR	41	262	(205)	1896150
4289	7.3	0.5	0.2	chr19	51787119	51787670	(6829946)	+	MER41A	LTR/ERV1	1	554	(0)	1896255
2405	15.3	0.5	2.1	chr19	53517232	53517618	(5099998)	+	LTR62	LTR/ERVL	1	381	(328)	1899500
15	4.5	0.0	4.0	chr19	54137502	54137526	(4480090)	+	(GGA)n	Simple_repeat	1	25	(0)	1901171
15	3.8	3.5	3.3	chr19	54188174	54188202	(4429414)	+	(CCTCT)n	Simple_repeat	1	30	(0)	1901269
2405	9.0	0.0	0.0	chr19	54210491	54210789	(4406827)	+	AluSx3	SINE/Alu	1	299	(12)	1901313
2992	21.4	2.3	5.8	chr19	55038525	55038589	(3579027)	+	L1MB4	LINE/L1	5408	5472	(708)	1902850
2114	11.4	1.0	0.0	chr19	55038590	55038886	(3578730)	C	AluSq	SINE/Alu	(13)	300	1	1902851
223	33.1	10.8	0.0	chr19	55063369	55063525	(3554091)	+	MIRb	SINE/MIR	36	211	(57)	1902919
1779	11.8	10.6	0.0	chr19	55216200	55216462	(3401154)	C	AluSx	SINE/Alu	(15)	297	4	1903254
196	29.7	1.5	1.5	chr19	55280120	55280184	(3337432)	C	OldhAT1	DNA/hAT-Ac	(750)	2098	2034	1903374
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
2577	4.6	1.3	0.0	chr19	55653385	55653688	(2963928)	+	AluSc8	SINE/Alu	2	309	(2)	1904234
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
26	0.0	0.0	0.0	chr19	57363364	57363388	(1254228)	+	(TGCG)n	Simple_repeat	1	25	(0)	1907684
44	3.1	2.7	5.3	chr19	57487527	57487600	(1130016)	+	(ATCTCC)n	Simple_repeat	1	76	(0)	1907880
796	15.2	18.2	0.5	chr19	57632687	57632885	(984731)	C	Tigger2	DNA/TcMar-Tigger	(201)	2517	2276	1908073
400	13.4	0.0	8.2	chr19	57632879	57632951	(984665)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(999)	69	3	1908076
188	26.7	0.0	0.0	chr19	57849636	57849680	(767936)	C	L2c	LINE/L2	(312)	3075	3031	1908433
2441	6.8	0.0	3.4	chr19	57916811	57917132	(700484)	+	AluYm1	SINE/Alu	1	311	(0)	1908540
17	18.7	6.2	6.8	chr19	58305442	58305538	(312078)	+	(AGTGGTG)n	Simple_repeat	1	103	(0)	1909308
7001	7.2	3.1	0.0	chr19	58584237	58585172	(32444)	+	LTR13A	LTR/ERVK	1	966	(0)	1909770
725	23.0	3.8	5.0	chr2	471895	472132	(241721397)	+	L1MD1	LINE/L1	1045	1279	(5261)	1911275
250	11.1	2.2	0.0	chr2	2613547	2613591	(239579938)	C	L1M6	LINE/L1	(5901)	595	550	1913479
194	27.3	0.0	0.0	chr2	2613680	2613723	(239579806)	+	LFSINE_Vert	SINE/tRNA	358	401	(58)	1913480
646	29.5	14.9	0.2	chr2	3535534	3535961	(238657568)	C	L2a	LINE/L2	(351)	3068	2567	1914598
5313	11.1	8.3	0.3	chr2	6846889	6847664	(235345865)	C	LTR25	LTR/ERV1	(0)	844	1	1919104
191	34.2	0.9	5.8	chr2	6888009	6888129	(235305400)	C	L2c	LINE/L2	(232)	3155	3041	1919153
2352	11.2	0.0	0.0	chr2	8598528	8598832	(233594697)	+	AluSz6	SINE/Alu	2	306	(6)	1921622
4767	8.3	0.9	2.0	chr2	9169203	9169843	(233023686)	C	MER41B	LTR/ERV1	(0)	634	1	1922479
312	23.9	4.1	0.0	chr2	9170003	9170073	(233023456)	+	MER105	DNA/hAT-Charlie	1	74	(129)	1922480
1260	21.4	8.8	1.6	chr2	9200972	9201285	(232992244)	C	MER58B	DNA/hAT-Charlie	(2)	339	1	1922552
31	0.0	0.0	0.0	chr2	9753458	9753484	(232440045)	+	(AC)n	Simple_repeat	1	27	(0)	1923592
2294	8.0	0.7	0.0	chr2	10275790	10276078	(231917451)	+	AluSc	SINE/Alu	19	309	(0)	1924498
4057	10.2	4.6	7.1	chr2	10276079	10276194	(231917335)	C	MER41B	LTR/ERV1	(533)	101	1	1924497
288	32.3	1.1	0.0	chr2	10278577	10278669	(231914860)	C	MLT1J2	LTR/ERVL-MaLR	(93)	419	326	1924501
387	24.4	14.0	0.0	chr2	10278673	10278795	(231914734)	C	MLT1J2	LTR/ERVL-MaLR	(305)	143	1	1924501
1354	7.4	0.0	0.0	chr2	10296181	10296356	(231897173)	C	MER41B	LTR/ERV1	(458)	176	1	1924531
507	25.6	12.9	0.0	chr2	11940983	11941158	(230252371)	+	MIRb	SINE/MIR	13	214	(54)	1927507
3598	12.9	10.4	2.9	chr2	11941325	11941978	(230251551)	+	LTR62	LTR/ERVL	1	709	(0)	1927508
4775	9.9	1.3	0.2	chr2	12083869	12084495	(230109034)	+	MER41B	LTR/ERV1	1	634	(0)	1927744
2552	9.8	0.0	0.0	chr2	12278775	12279080	(229914449)	C	AluSx1	SINE/Alu	(6)	306	1	1928044
2117	15.6	5.0	2.8	chr2	12279105	12279460	(229914069)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1928045
3298	10.5	2.9	0.0	chr2	15251481	15251945	(226941584)	C	MER41A	LTR/ERV1	(75)	479	1	1932428
211	32.6	10.6	1.7	chr2	15561672	15561852	(226631677)	C	L2c	LINE/L2	(164)	3223	3025	1932916
1366	19.0	11.5	5.6	chr2	15561880	15562107	(226631422)	C	MER83	LTR/ERV1	(0)	448	176	1932921
1102	24.2	10.1	6.4	chr2	15562705	15563266	(226630263)	+	L2a	LINE/L2	2832	3424	(2)	1932925
381	26.9	11.6	3.0	chr2	17869087	17869171	(224324358)	C	MIR	SINE/MIR	(19)	243	155	1936651
2580	18.7	4.7	0.8	chr2	17869172	17869683	(224323846)	C	LTR53B	LTR/ERVL	(0)	533	1	1936652
7194	8.7	0.3	0.0	chr2	20501252	20502198	(221691331)	C	LTR5A	LTR/ERVK	(83)	950	1	1940484
1537	19.3	5.6	6.0	chr2	20502203	20502364	(221691165)	+	Tigger9b	DNA/TcMar-Tigger	244	417	(207)	1940485
2267	9.5	0.0	2.9	chr2	20502365	20502680	(221690849)	C	AluY	SINE/Alu	(3)	308	2	1940486
1354	17.0	8.8	1.4	chr2	20506928	20507320	(221686209)	+	L1MD	LINE/L1	5068	5491	(751)	1940492
14	10.3	3.0	2.9	chr2	20651130	20651162	(221542367)	+	(CCCTG)n	Simple_repeat	1	34	(0)	1940695
242	31.3	7.5	1.7	chr2	24253384	24253552	(217939977)	+	L2c	LINE/L2	2923	3118	(269)	1945739
12	18.9	7.1	0.0	chr2	26184741	26184782	(216008747)	+	(CGCTGG)n	Simple_repeat	1	45	(0)	1949502
1400	17.6	5.9	2.6	chr2	26411208	26411516	(215782013)	C	MER33	DNA/hAT-Charlie	(4)	320	1	1949911
1505	12.1	0.0	0.0	chr2	26411604	26411809	(215781720)	+	AluSc	SINE/Alu	88	293	(16)	1949912
2284	12.0	0.3	0.0	chr2	26749485	26749793	(215443736)	+	AluSx	SINE/Alu	1	310	(2)	1950530
455	25.4	9.1	15.1	chr2	26749794	26749864	(215443665)	C	L1MC5a	LINE/L1	(96)	2681	2635	1950529
6908	10.5	0.5	4.4	chr2	26749865	26750871	(215442658)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1950531
1880	16.1	0.0	1.0	chr2	27006424	27006733	(215186796)	C	AluJr	SINE/Alu	(5)	307	1	1951046
1323	25.7	12.0	3.5	chr2	27006734	27007144	(215186385)	C	MER34B	LTR/ERV1	(100)	465	4	1951045
2477	5.3	0.0	0.0	chr2	27016382	27016682	(215176847)	C	AluYk3	SINE/Alu	(9)	302	2	1951058
18	11.6	0.0	4.9	chr2	27032889	27032929	(215160600)	+	G-rich	Low_complexity	1	41	(0)	1951084
16	19.6	0.0	4.4	chr2	27033067	27033111	(215160418)	+	(CGG)n	Simple_repeat	1	45	(0)	1951085
577	6.8	0.0	0.0	chr2	27051214	27051287	(215142242)	+	tRNA-Ala-GCY	tRNA	1	74	(2)	1951108
13	8.5	4.0	0.0	chr2	27092709	27092733	(215100796)	+	(CTTC)n	Simple_repeat	1	26	(0)	1951163
213	27.6	7.9	4.5	chr2	27092902	27093011	(215100518)	C	MIR1_Amn	SINE/MIR	(100)	130	17	1951164
348	31.7	4.0	0.0	chr2	27489999	27490118	(214703411)	C	MIRc	SINE/MIR	(66)	202	78	1951908
14	21.3	0.0	6.1	chr2	28355653	28355701	(213837828)	+	(TGGC)n	Simple_repeat	1	49	(0)	1953415
1079	26.4	7.2	0.3	chr2	28366053	28366390	(213827139)	C	LTR16A	LTR/ERVL	(88)	363	1	1953431
271	28.1	10.2	1.7	chr2	28366889	28367004	(213826525)	C	MIR3	SINE/MIR	(58)	150	24	1953432
615	28.3	7.6	0.9	chr2	28682971	28683191	(213510338)	+	MIRb	SINE/MIR	24	260	(8)	1953993
2079	13.3	14.9	1.0	chr2	29804738	29805124	(212388405)	+	LTR47A	LTR/ERVL	3	452	(0)	1955876
185	25.0	0.0	0.0	chr2	30284134	30284177	(211909352)	+	L3	LINE/CR1	3843	3886	(213)	1956696
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
255	33.8	9.4	1.9	chr2	32165504	32165604	(210027925)	+	MIRb	SINE/MIR	107	221	(47)	1959676
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
3991	8.1	1.4	3.7	chr2	33894609	33894783	(208298746)	+	MER41A	LTR/ERV1	1	177	(377)	1962720
2326	8.5	1.4	0.3	chr2	33894784	33895076	(208298453)	+	AluSq2	SINE/Alu	1	296	(17)	1962721
376	28.2	4.3	0.0	chr2	37560300	37560409	(204633120)	+	LTR33	LTR/ERVL	28	142	(373)	1967917
601	33.7	2.6	2.0	chr2	37560440	37560745	(204632784)	+	LTR33	LTR/ERVL	208	515	(0)	1967917
2122	18.6	9.3	2.2	chr2	37683260	37683765	(204509764)	+	MER74A	LTR/ERVL	1	546	(12)	1968097
1864	18.2	8.3	0.8	chr2	38654884	38655260	(203538269)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1969649
766	19.9	7.0	2.9	chr2	39150209	39150439	(203043090)	+	MLT1H2	LTR/ERVL-MaLR	284	555	(0)	1970659
4212	8.2	0.6	1.6	chr2	39468180	39468739	(202724790)	+	MER41A	LTR/ERV1	1	554	(0)	1971259
9609	19.0	3.1	1.0	chr2	39834442	39837127	(202356402)	C	L1PA15-16	LINE/L1	(1779)	5070	2324	1971798
15	4.2	4.0	0.0	chr2	41932532	41932556	(200260973)	+	(GGGA)n	Simple_repeat	1	26	(0)	1974664
677	25.9	4.6	0.5	chr2	43179375	43179560	(199013969)	+	MIR	SINE/MIR	18	211	(51)	1977048
261	21.9	0.0	16.5	chr2	43190957	43191027	(199002502)	C	MIRc	SINE/MIR	(84)	184	120	1977075
30	27.1	1.2	0.0	chr2	43210845	43210924	(198982605)	+	(CA)n	Simple_repeat	1	81	(0)	1977114
266	34.5	6.7	0.6	chr2	43267453	43267621	(198925908)	+	MLT1J	LTR/ERVL-MaLR	20	199	(313)	1977213
763	29.3	20.8	5.3	chr2	43293508	43294203	(198899326)	C	L3	LINE/CR1	(6)	4093	3262	1977248
318	32.5	10.9	3.5	chr2	43294405	43294742	(198898787)	C	L2c	LINE/L2	(353)	3066	2701	1977249
33	5.6	0.0	0.0	chr2	45651060	45651096	(196542433)	+	(CA)n	Simple_repeat	1	37	(0)	1981029
22	16.0	8.8	2.3	chr2	45651173	45651252	(196542277)	+	(GGCGAGC)n	Simple_repeat	1	87	(0)	1981030
2001	19.4	3.8	0.3	chr2	46339670	46340021	(195853508)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1982103
17	8.1	0.0	0.0	chr2	46617235	46617260	(195576269)	+	(CTG)n	Simple_repeat	1	26	(0)	1982534
4595	9.4	0.8	0.5	chr2	46753518	46754147	(195439382)	C	MER41B	LTR/ERV1	(0)	634	3	1982754
1459	26.1	10.8	2.3	chr2	46754148	46754580	(195438949)	C	Tigger13a	DNA/TcMar-Tigger	(164)	607	131	1982753
1129	17.1	3.8	1.0	chr2	46875889	46876287	(195317242)	C	LTR54	LTR/ERV1	(8)	502	1	1982976
407	21.8	12.1	7.9	chr2	47297833	47297958	(194895571)	+	MamTip1	DNA/hAT-Tip100	1	128	(139)	1983750
3763	13.0	8.8	0.9	chr2	47297959	47298541	(194894988)	+	MER41B	LTR/ERV1	1	634	(0)	1983751
1634	14.3	8.9	2.6	chr2	47654244	47654749	(194538780)	C	LTR18B	LTR/ERVL	(27)	587	1	1984479
985	31.6	15.1	5.4	chr2	48114616	48115604	(194077925)	C	LTR81A	LTR/Gypsy	(4)	1389	288	1985396
755	25.0	9.0	1.3	chr2	48145927	48146241	(194047288)	C	MLT1F2	LTR/ERVL-MaLR	(194)	486	57	1985453
1028	23.1	11.6	9.1	chr2	48146244	48146557	(194046972)	C	L1MCc	LINE/L1	(5999)	424	88	1985454
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
24	12.3	2.3	0.0	chr2	48440801	48440844	(193752685)	+	(GGC)n	Simple_repeat	1	45	(0)	1985972
660	24.2	10.0	2.5	chr2	54081678	54081747	(188111782)	C	Arthur1B	DNA/hAT-Tip100	(571)	654	568	1993727
247	28.7	8.0	5.0	chr2	54081861	54081981	(188111548)	C	MLT1H	LTR/ERVL-MaLR	(193)	356	232	1993732
186	26.2	1.6	0.0	chr2	55115846	55115906	(187077623)	C	L3b	LINE/CR1	(383)	4849	4788	1995318
872	12.9	1.3	0.3	chr2	55116096	55116242	(187077287)	C	FLAM_C	SINE/Alu	(82)	220	9	1995319
915	20.1	4.2	0.5	chr2	55618638	55618821	(186574708)	C	AluSc8	SINE/Alu	(9)	302	112	1996249
1009	12.9	0.0	0.0	chr2	62301235	62301373	(179892156)	+	Tigger1	DNA/TcMar-Tigger	1	139	(2279)	2006222
304	33.0	15.1	2.1	chr2	62304510	62304843	(179888686)	C	LTR104_Mam	LTR/Gypsy	(948)	561	177	2006228
288	30.2	8.5	4.2	chr2	64064641	64064854	(178128675)	+	MamGypLTR2c	LTR/Gypsy	1	224	(1126)	2008784
2527	9.2	0.7	0.0	chr2	64065028	64065330	(178128199)	+	AluSc8	SINE/Alu	1	305	(6)	2008785
19	16.6	4.3	0.0	chr2	64524370	64524416	(177669113)	+	(GCGGAG)n	Simple_repeat	1	49	(0)	2009513
4264	8.2	0.9	0.0	chr2	64800923	64801469	(177392060)	+	MER41A	LTR/ERV1	1	552	(2)	2009954
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
15	21.1	2.5	2.4	chr2	66434929	66434968	(175758561)	+	(TG)n	Simple_repeat	1	41	(0)	2012778
11	20.5	2.9	0.0	chr2	68252737	68252770	(173940759)	+	G-rich	Low_complexity	1	35	(0)	2015306
1563	15.2	0.3	5.7	chr2	68419984	68420298	(173773231)	+	MER33	DNA/hAT-Charlie	20	317	(7)	2015584
4294	11.0	0.9	0.9	chr2	68671559	68672190	(173521339)	C	MER41B	LTR/ERV1	(2)	632	1	2015925
778	31.4	6.2	5.7	chr2	68672191	68672569	(173520960)	C	L2a	LINE/L2	(315)	3111	2727	2015924
359	30.5	7.9	0.6	chr2	68806826	68806990	(173386539)	+	MIR	SINE/MIR	14	191	(71)	2016111
382	18.8	10.1	0.0	chr2	69181924	69182003	(173011526)	C	5S	rRNA	(32)	89	1	2016633
334	24.9	3.7	4.5	chr2	69182146	69182325	(173011204)	+	L2a	LINE/L2	2811	3123	(303)	2016634
1776	21.2	3.6	3.4	chr2	69734253	69734738	(172458791)	+	MER87	LTR/ERV1	1	468	(73)	2017637
2322	9.9	0.0	0.0	chr2	69743225	69743516	(172450013)	C	AluSx	SINE/Alu	(19)	293	2	2017658
5220	11.7	1.4	1.4	chr2	69798832	69799610	(172393919)	C	LTR19C	LTR/ERV1	(0)	779	1	2017771
19	21.5	4.1	0.0	chr2	70108905	70108953	(172084576)	+	(TG)n	Simple_repeat	1	51	(0)	2018398
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
2290	13.2	15.3	1.6	chr2	70255755	70256193	(171937336)	C	LTR54	LTR/ERV1	(0)	510	1	2018743
1829	19.9	4.4	7.9	chr2	70256194	70256285	(171937244)	C	MER34B	LTR/ERV1	(367)	198	109	2018740
206	22.4	15.7	4.3	chr2	72090456	72090595	(170102934)	C	L3	LINE/CR1	(884)	3215	3057	2021559
203	26.5	5.6	1.4	chr2	72757097	72757165	(169436364)	+	MIR	SINE/MIR	186	257	(5)	2022506
704	27.4	5.8	10.3	chr2	72757258	72757724	(169435805)	+	MER65D	LTR/ERV1	1	473	(0)	2022507
610	24.4	11.9	12.3	chr2	73780309	73780779	(168412750)	C	L1ME4b	LINE/L1	(138)	754	286	2024182
16	14.5	5.3	0.0	chr2	74554224	74554261	(167639268)	+	(GCG)n	Simple_repeat	1	40	(0)	2025554
204	27.4	6.1	0.0	chr2	74862740	74862801	(167330728)	C	MIRb	SINE/MIR	(24)	244	179	2026109
5007	19.6	9.5	6.7	chr2	81481148	81482372	(160711157)	C	LTR2752	LTR/ERV1	(0)	1263	1	2035101
218	28.9	7.5	3.6	chr2	84807064	84807203	(157386326)	C	L2	LINE/L2	(1897)	1522	1377	2039460
335	31.4	8.3	3.1	chr2	84807322	84807656	(157385873)	C	LTR81B	LTR/Gypsy	(17)	1376	812	2039461
332	25.0	2.1	10.5	chr2	85307199	85307350	(156886179)	+	Charlie4z	DNA/hAT-Charlie	29	167	(0)	2040509
32	21.5	2.7	0.0	chr2	85418577	85418651	(156774878)	+	(CA)n	Simple_repeat	1	77	(0)	2040720
2760	15.8	0.9	0.0	chr2	85497535	85497982	(156695547)	+	MER57A-int	LTR/ERV1	5344	5795	(392)	2040905
572	20.1	12.6	7.1	chr2	85497983	85498207	(156695322)	+	LTR54	LTR/ERV1	1	239	(271)	2040906
695	23.2	2.9	1.2	chr2	85498208	85498377	(156695152)	+	MER57A-int	LTR/ERV1	6015	6187	(0)	2040905
3600	8.3	5.2	1.8	chr2	85890279	85890657	(156302872)	C	MER41C	LTR/ERV1	(150)	371	2	2041677
907	27.8	10.4	9.0	chr2	88250176	88250732	(153942797)	+	MLT1L	LTR/ERVL-MaLR	43	608	(2)	2045567
273	34.9	0.4	0.0	chr2	88628199	88628309	(153565220)	C	MIR3	SINE/MIR	(145)	123	11	2046399
18	22.1	2.1	0.0	chr2	96266002	96266048	(145927481)	+	(TCC)n	Simple_repeat	1	48	(0)	2051857
240	16.3	0.0	0.0	chr2	96335614	96335656	(145857873)	C	Charlie4z	DNA/hAT-Charlie	(96)	71	29	2051963
15	8.2	4.3	4.3	chr2	96335904	96335939	(145857590)	+	G-rich	Low_complexity	1	36	(0)	2051964
1561	16.3	0.4	0.4	chr2	96412502	96412747	(145780782)	+	AluSz	SINE/Alu	1	246	(66)	2052107
4506	7.0	0.0	0.0	chr2	96412748	96413301	(145780228)	+	MER41A	LTR/ERV1	1	554	(0)	2052108
4327	10.9	3.5	1.0	chr2	96921850	96922343	(145271186)	+	MER41B	LTR/ERV1	1	509	(125)	2053011
988	24.8	14.7	4.9	chr2	96923714	96924141	(145269388)	C	MLT1F	LTR/ERVL-MaLR	(71)	477	1	2053015
460	33.2	12.0	1.9	chr2	96924287	96924651	(145268878)	C	MamRep137	DNA/TcMar-Tigger	(7)	503	97	2053016
3925	9.9	3.2	0.6	chr2	97711948	97712496	(144481033)	C	LTR6A	LTR/ERV1	(0)	564	1	2054036
769	20.0	4.1	2.1	chr2	98608861	98609049	(143584480)	C	MER53	DNA/hAT	(0)	193	1	2055213
1764	8.0	25.9	0.0	chr2	99609846	99610183	(142583346)	+	LTR7C	LTR/ERV1	1	464	(0)	2056735
3187	23.5	3.9	4.7	chr2	99610184	99611610	(142581919)	C	L1MD2	LINE/L1	(4869)	1764	348	2056736
254	28.7	6.1	0.9	chr2	99771748	99771856	(142421673)	C	MIRb	SINE/MIR	(89)	179	65	2056965
6366	14.7	5.2	1.9	chr2	99787914	99789102	(142404427)	+	Tigger3b	DNA/TcMar-Tigger	1	1231	(0)	2056983
259	27.0	10.8	6.3	chr2	100291130	100291287	(141902242)	+	L1MCc	LINE/L1	224	389	(6034)	2057668
320	25.3	9.6	6.8	chr2	100292303	100292463	(141901066)	C	L1MCc	LINE/L1	(6034)	389	224	2057670
5623	21.9	2.2	5.9	chr2	100739614	100739775	(141453754)	+	L1ME1	LINE/L1	5499	5655	(682)	2058424
1588	24.0	7.5	6.1	chr2	100739788	100740315	(141453214)	+	MLT1F2	LTR/ERVL-MaLR	21	556	(4)	2058433
240	29.8	6.0	0.0	chr2	102069667	102069760	(140123769)	C	MIRb	SINE/MIR	(82)	186	87	2060598
18	26.3	0.0	0.0	chr2	102227797	102227847	(139965682)	+	(TCTC)n	Simple_repeat	1	51	(0)	2060808
229	31.6	1.2	1.2	chr2	102420326	102420405	(139773124)	C	MER5A	DNA/hAT-Charlie	(73)	116	37	2061052
181	35.3	0.0	4.2	chr2	102420676	102420746	(139772783)	C	MER5B	DNA/hAT-Charlie	(39)	139	72	2061053
281	32.0	0.0	2.6	chr2	102420763	102420839	(139772690)	C	MIR3	SINE/MIR	(52)	156	82	2061054
4058	13.9	1.3	0.3	chr2	103469416	103470043	(138723486)	C	MER41B	LTR/ERV1	(0)	634	1	2062368
4355	10.1	2.3	0.6	chr2	103470044	103470672	(138722857)	C	MER41-int	LTR/ERV1	(2)	5944	5305	2062368
262	29.9	2.6	8.8	chr2	105454831	105455035	(136738494)	+	MamRep38	DNA/hAT	61	252	(43)	2064972
847	28.7	11.7	2.3	chr2	105467480	105467825	(136725704)	C	L2	LINE/L2	(1259)	2160	1788	2064996
4790	8.9	0.5	0.8	chr2	105467826	105468461	(136725068)	+	MER41B	LTR/ERV1	1	634	(0)	2064997
1772	24.2	3.6	6.2	chr2	105721942	105722460	(136471069)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2065394
183	32.5	6.8	6.8	chr2	105722461	105722487	(136471042)	C	L3b	LINE/CR1	(226)	3873	3850	2065387
2326	8.4	0.0	3.7	chr2	107748199	107748521	(134445008)	C	AluY	SINE/Alu	(0)	311	1	2068295
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
13	20.9	0.0	0.0	chr2	110205055	110205087	(131988442)	+	(CCGCC)n	Simple_repeat	1	33	(0)	2071881
3913	15.2	3.5	7.3	chr2	111433554	111434291	(130759238)	C	LTR62	LTR/ERVL	(0)	709	1	2073526
2010	24.3	4.5	9.0	chr2	111659359	111660135	(130533394)	+	MER21C	LTR/ERVL	23	853	(85)	2073829
416	22.8	4.2	0.9	chr2	111699086	111699200	(130494329)	C	L1ME4a	LINE/L1	(205)	5919	5801	2073889
36	0.0	0.0	0.0	chr2	111699386	111699416	(130494113)	+	(AC)n	Simple_repeat	1	31	(0)	2073890
2608	17.0	10.3	3.4	chr2	112272647	112273260	(129920269)	C	MER67B	LTR/ERV1	(0)	661	1	2074830
233	31.1	8.8	0.0	chr2	112665245	112665347	(129528182)	C	MIRb	SINE/MIR	(74)	194	82	2075502
271	30.7	5.6	0.0	chr2	112706523	112706623	(129486906)	+	MamGypsy2-I	LTR/Gypsy	1861	1967	(2199)	2075599
2299	18.1	5.2	0.5	chr2	112793246	112793651	(129399878)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2075743
270	24.9	9.1	6.0	chr2	112793674	112793874	(129399655)	C	L3	LINE/CR1	(1880)	2219	2012	2075744
289	23.6	0.8	5.4	chr2	112794225	112794349	(129399180)	+	MLT1J2	LTR/ERVL-MaLR	71	184	(227)	2075746
284	16.0	0.0	2.0	chr2	112794470	112794520	(129399009)	+	MLT1J2	LTR/ERVL-MaLR	342	391	(20)	2075746
2266	25.0	7.2	2.5	chr2	113012640	113013132	(129180397)	+	Kanga1a	DNA/TcMar-Tc2	4	509	(245)	2076085
2334	13.4	0.0	0.3	chr2	113013133	113013439	(129180090)	+	AluSx	SINE/Alu	1	306	(6)	2076086
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
16	19.5	3.6	3.5	chr2	113756650	113756705	(128436824)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	2077268
13	21.9	1.8	7.0	chr2	113756846	113756901	(128436628)	+	GA-rich	Low_complexity	1	57	(0)	2077269
2525	15.0	6.9	0.0	chr2	119338578	119338998	(122854531)	C	LTR47A	LTR/ERVL	(0)	452	1	2085158
610	20.0	1.7	0.0	chr2	119339002	119339116	(122854413)	+	L1MC4	LINE/L1	7926	8042	(0)	2085145
2763	4.4	0.0	0.0	chr2	121531314	121531609	(120661920)	+	AluYe5	SINE/Alu	1	296	(14)	2088813
2445	16.7	8.4	1.4	chr2	121532350	121532848	(120660681)	+	L1MC3	LINE/L1	7147	7683	(102)	2088815
18658	11.9	1.8	1.5	chr2	124991429	124993960	(117199569)	+	MER41-int	LTR/ERV1	3404	5946	(0)	2094032
4002	12.9	1.7	2.2	chr2	124993962	124994596	(117198933)	+	MER41B	LTR/ERV1	3	634	(0)	2094032
15	19.3	4.1	2.0	chr2	127387975	127388023	(114805506)	+	(CGTCGCG)n	Simple_repeat	1	51	(0)	2097357
14	22.8	0.0	0.0	chr2	127526413	127526448	(114667081)	+	(GGCG)n	Simple_repeat	1	36	(0)	2097594
19	17.5	3.6	3.5	chr2	127858082	127858137	(114335392)	+	(CGC)n	Simple_repeat	1	58	(0)	2098144
1962	17.6	11.6	3.0	chr2	127927405	127927682	(114265847)	C	LTR54	LTR/ERV1	(175)	335	2	2098288
989	23.4	3.5	1.0	chr2	127927683	127927984	(114265545)	+	L1MB4	LINE/L1	2303	2612	(4905)	2098290
3988	7.2	2.7	0.0	chr2	128443279	128443816	(113749713)	C	MER41A	LTR/ERV1	(0)	554	2	2099214
233	23.1	0.0	0.0	chr2	130181936	130181987	(112011542)	C	L2b	LINE/L2	(12)	3363	3312	2101458
185	31.8	0.0	3.1	chr2	130182069	130182133	(112011396)	+	L2a	LINE/L2	3358	3420	(6)	2101459
14	29.4	0.0	5.5	chr2	130182271	130182343	(112011186)	+	G-rich	Low_complexity	1	73	(0)	2101460
897	19.6	0.0	0.0	chr2	130380051	130380208	(111813321)	C	AluJb	SINE/Alu	(18)	294	137	2101742
28	16.7	0.0	0.0	chr2	134918469	134918522	(107275007)	+	(CCCTC)n	Simple_repeat	1	54	(0)	2108147
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
187	40.5	7.5	0.5	chr2	138058432	138058642	(104134887)	+	L2c	LINE/L2	2666	2892	(527)	2112923
2490	22.2	4.2	1.4	chr2	138058749	138059442	(104134087)	C	L1MC4a	LINE/L1	(0)	7882	7169	2112924
703	32.0	11.2	2.3	chr2	139850277	139850705	(102342824)	+	L2	LINE/L2	2042	2513	(906)	2115367
3785	9.2	5.3	0.4	chr2	139864873	139865409	(102328120)	+	MER61E	LTR/ERV1	1	565	(4)	2115385
6443	11.2	2.6	2.0	chr2	142695091	142696086	(99497443)	C	LTR5B	LTR/ERVK	(0)	1002	1	2119127
6309	13.0	8.1	2.8	chr2	142696087	142697500	(99496029)	+	L1PBa	LINE/L1	1881	3385	(3530)	2119125
182	32.8	6.7	0.8	chr2	142848289	142848414	(99345115)	+	X7B_LINE	LINE/CR1	113	246	(4)	2119320
371	30.8	6.2	3.7	chr2	142848420	142848608	(99344921)	C	MIRb	SINE/MIR	(70)	198	5	2119321
3123	10.3	0.0	0.0	chr2	142930835	142931241	(99262288)	C	MER48	LTR/ERV1	(0)	407	1	2119440
1179	10.4	0.0	1.1	chr2	142931242	142931426	(99262103)	C	HERVH48-int	LTR/ERV1	(0)	6654	6472	2119440
467	27.5	7.4	0.0	chr2	144659489	144659626	(97533903)	C	MIR	SINE/MIR	(89)	173	25	2121701
253	30.9	15.0	3.3	chr2	147809501	147809711	(94383818)	C	MIR	SINE/MIR	(6)	256	17	2125749
2247	12.3	0.3	0.0	chr2	147809773	147810080	(94383449)	+	AluSz	SINE/Alu	1	309	(3)	2125750
257	27.1	6.3	5.0	chr2	148545547	148545686	(93647843)	+	MLT1N2	LTR/ERVL-MaLR	417	558	(4)	2126750
1784	20.9	5.3	8.9	chr2	151288111	151288553	(90904976)	+	MLT1D	LTR/ERVL-MaLR	1	441	(64)	2130623
29	6.1	0.0	0.0	chr2	151288554	151288587	(90904942)	+	(TG)n	Simple_repeat	1	34	(0)	2130624
1784	20.9	5.3	8.9	chr2	151288588	151288668	(90904861)	+	MLT1D	LTR/ERVL-MaLR	442	505	(0)	2130623
2653	11.2	13.6	0.0	chr2	151380467	151380905	(90812624)	C	LTR54	LTR/ERV1	(0)	510	3	2130784
559	26.1	10.3	9.1	chr2	151760543	151760782	(90432747)	C	MamRep4096	DNA/hAT-Tip100	(14)	412	157	2131307
21	0.0	0.0	0.0	chr2	151766467	151766489	(90427040)	+	(CA)n	Simple_repeat	1	23	(0)	2131318
354	33.0	16.4	2.2	chr2	151788096	151788414	(90405115)	C	L2c	LINE/L2	(17)	3370	2998	2131356
616	34.4	4.7	4.7	chr2	151815989	151816514	(90377015)	+	MLT1F1	LTR/ERVL-MaLR	40	563	(6)	2131397
18	16.8	0.0	6.1	chr2	152335084	152335133	(89858396)	+	G-rich	Low_complexity	1	46	(0)	2132279
2313	9.2	1.3	0.3	chr2	155231099	155231402	(86962127)	+	AluY	SINE/Alu	3	309	(2)	2135950
16	19.9	0.0	0.0	chr2	155231404	155231438	(86962091)	+	GA-rich	Low_complexity	1	35	(0)	2135951
2176	11.6	0.0	0.7	chr2	155231445	155231738	(86961791)	+	AluSx	SINE/Alu	1	292	(20)	2135952
1211	21.4	15.1	1.6	chr2	157247137	157247564	(84945965)	+	LTR54B	LTR/ERV1	1	496	(2)	2138482
2460	6.1	0.4	0.0	chr2	157262820	157263126	(84930403)	C	AluY	SINE/Alu	(0)	311	1	2138510
580	32.9	9.9	1.5	chr2	157301187	157301680	(84891849)	C	L2a	LINE/L2	(0)	3426	2876	2138570
19	11.7	2.7	0.0	chr2	157301681	157301717	(84891812)	+	(TCCT)n	Simple_repeat	1	38	(0)	2138571
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
18380	11.6	1.9	5.7	chr2	157929591	157930549	(84262980)	C	Tigger4	DNA/TcMar-Tigger	(1856)	875	1	2139462
1616	21.1	4.8	3.8	chr2	157937764	157938133	(84255396)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2139480
2407	11.4	0.0	0.0	chr2	157938329	157938625	(84254904)	C	AluSx	SINE/Alu	(14)	298	2	2139481
394	31.5	2.3	0.0	chr2	158894183	158894312	(83299217)	+	MIR3	SINE/MIR	73	205	(3)	2140742
1707	16.3	2.6	4.7	chr2	159152465	159152783	(83040746)	C	AluJr	SINE/Alu	(0)	312	1	2141190
262	26.5	0.0	5.7	chr2	161172661	161172748	(81020781)	+	MER5A1	DNA/hAT-Charlie	17	99	(67)	2144063
439	32.5	11.5	1.0	chr2	161172794	161173088	(81020441)	+	L2b	LINE/L2	2595	2924	(495)	2144064
3313	14.6	2.4	0.4	chr2	166357332	166357869	(75835660)	+	LTR73	LTR/ERV1	1	549	(23)	2150913
644	29.2	5.3	5.1	chr2	166357893	166358034	(75835495)	C	L1ME4b	LINE/L1	(556)	336	190	2150911
656	17.7	0.0	0.0	chr2	167944857	167944959	(74248570)	+	MER72	LTR/ERV1	5	107	(615)	2152855
3808	14.6	0.6	2.3	chr2	167944960	167945604	(74247925)	+	MER41B	LTR/ERV1	1	634	(0)	2152856
2625	18.3	4.3	3.3	chr2	167945614	167946217	(74247312)	+	MER72	LTR/ERV1	111	720	(2)	2152855
1526	21.4	5.5	0.5	chr2	168420330	168420399	(73773130)	+	MER41B	LTR/ERV1	111	191	(443)	2153520
2208	12.1	0.0	0.0	chr2	168420400	168420681	(73772848)	+	AluSx4	SINE/Alu	1	282	(28)	2153521
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
349	30.9	8.1	5.7	chr2	168799299	168799490	(73394039)	C	LTR88b	LTR/Gypsy?	(22)	815	619	2154093
2121	11.3	2.0	0.0	chr2	169012478	169012768	(73180761)	+	AluSx1	SINE/Alu	16	312	(0)	2154390
7918	14.1	2.1	1.2	chr2	169134080	169135790	(73057739)	+	HERVH-int	LTR/ERV1	3478	5149	(2564)	2154542
1782	16.7	25.9	3.6	chr2	169711625	169712096	(72481433)	C	LTR18B	LTR/ERVL	(0)	614	1	2155456
2302	17.9	0.3	1.4	chr2	170247536	170247904	(71945625)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2156352
266	33.1	4.5	0.0	chr2	170249107	170249233	(71944296)	C	LTR88a	LTR/Gypsy?	(377)	439	307	2156354
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
1261	27.1	10.0	4.8	chr2	170264251	170264553	(71928976)	C	MLT1H1	LTR/ERVL-MaLR	(211)	344	3	2156369
389	29.6	6.8	4.6	chr2	170974228	170974538	(71218991)	C	L2c	LINE/L2	(192)	3195	2879	2157578
2390	19.9	6.9	5.4	chr2	171244574	171245167	(70948362)	C	LTR26E	LTR/ERV1	(0)	622	13	2158099
4800	12.4	10.9	0.0	chr2	171245168	171245895	(70947634)	+	LTR8B	LTR/ERV1	1	817	(3)	2158100
3710	10.0	0.6	3.1	chr2	171578099	171578643	(70614886)	C	MER41B	LTR/ERV1	(107)	527	1	2158686
974	25.1	8.0	5.7	chr2	173264240	173264581	(68928948)	C	MLT1L	LTR/ERVL-MaLR	(56)	554	193	2161367
974	17.6	5.3	8.4	chr2	173264754	173265026	(68928503)	+	L1MB2	LINE/L1	5904	6167	(4)	2161369
11	13.7	2.8	5.4	chr2	176931900	176931935	(65261594)	+	(GTTTTG)n	Simple_repeat	1	37	(0)	2166832
16	5.3	0.0	0.0	chr2	176931921	176931940	(65261589)	+	(T)n	Simple_repeat	1	20	(0)	2166833
18	16.9	0.0	5.8	chr2	177212582	177212633	(64980896)	+	(CGCCCGC)n	Simple_repeat	1	52	(0)	2167291
14	25.2	5.0	3.6	chr2	177392828	177392907	(64800622)	+	G-rich	Low_complexity	1	84	(0)	2167595
244	33.3	6.6	7.3	chr2	177890146	177890404	(64303125)	C	L1M7	LINE/L1	(5650)	568	312	2168244
423	28.1	8.7	2.5	chr2	178075002	178075205	(64118324)	C	LTR33	LTR/ERVL	(0)	515	298	2168506
4076	10.5	6.3	0.2	chr2	181430258	181430850	(60762679)	C	MER41B	LTR/ERV1	(2)	632	1	2172723
428	31.4	8.4	9.5	chr2	181430851	181431060	(60762469)	C	MLT1J	LTR/ERVL-MaLR	(310)	202	1	2172722
524	32.4	14.5	3.2	chr2	181787076	181787324	(60406205)	+	MER115	DNA/hAT-Tip100	151	432	(261)	2173128
730	21.8	5.5	0.0	chr2	181787350	181787537	(60405992)	+	MER115	DNA/hAT-Tip100	495	693	(0)	2173129
784	33.1	14.1	4.7	chr2	181787589	181788219	(60405310)	C	LTR104_Mam	LTR/Gypsy	(397)	1112	400	2173130
297	25.8	2.1	5.1	chr2	182642305	182642402	(59551127)	C	MLT1K	LTR/ERVL-MaLR	(125)	470	376	2174263
411	23.1	0.0	1.1	chr2	182642463	182642554	(59550975)	C	MLT1K	LTR/ERVL-MaLR	(341)	254	164	2174263
26	0.0	0.0	0.0	chr2	183038418	183038442	(59155087)	+	(GGC)n	Simple_repeat	1	25	(0)	2174824
16	15.2	2.0	6.0	chr2	183038554	183038602	(59154927)	+	(GGCCCT)n	Simple_repeat	1	50	(0)	2174825
3968	7.7	1.8	3.9	chr2	188234862	188235427	(53958102)	+	MER41A	LTR/ERV1	1	554	(0)	2181395
210	32.5	2.4	1.2	chr2	189762931	189763011	(52430518)	C	MIRb	SINE/MIR	(151)	117	36	2183331
659	25.6	5.4	1.1	chr2	190380894	190381071	(51812458)	+	MER45R	DNA/hAT-Tip100	3	188	(1393)	2184274
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
4293	6.8	1.6	0.0	chr2	191599641	191600185	(50593344)	+	MER41A	LTR/ERV1	1	554	(0)	2186120
879	27.7	12.3	1.9	chr2	191637133	191637552	(50555977)	+	MLT1L	LTR/ERVL-MaLR	133	602	(8)	2186183
4057	10.4	1.7	8.0	chr2	195368772	195369448	(46824081)	C	MER41B	LTR/ERV1	(0)	634	1	2190796
316	30.7	7.2	3.9	chr2	197889075	197889261	(44304268)	C	MIR3	SINE/MIR	(0)	208	20	2194732
3687	12.6	3.9	0.3	chr2	198214029	198214626	(43978903)	+	Ricksha_c	DNA/MULE-MuDR	8	627	(1421)	2195198
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
4841	2.5	0.2	0.2	chr2	201126038	201126595	(41066934)	C	LTR6B	LTR/ERV1	(0)	558	1	2199587
480	27.2	16.2	1.4	chr2	201126596	201126815	(41066714)	+	LTR67B	LTR/ERVL	338	596	(24)	2199588
51	0.0	0.0	0.0	chr2	204353480	204353523	(37840006)	+	(AC)n	Simple_repeat	1	44	(0)	2205501
1399	19.6	10.8	0.3	chr2	204353536	204353908	(37839621)	C	ORSL-2b	DNA/hAT-Tip100	(10)	498	82	2205502
4325	12.6	2.8	1.0	chr2	204354054	204354744	(37838785)	C	LTR62	LTR/ERVL	(5)	704	1	2205503
1705	21.2	2.0	0.0	chr2	205216031	205216369	(36977160)	+	Tigger3a	DNA/TcMar-Tigger	2	347	(1)	2206631
285	26.0	6.1	1.9	chr2	205216370	205216510	(36977019)	+	L1ME4a	LINE/L1	5964	6111	(13)	2206630
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
1399	19.0	3.0	9.3	chr2	207798197	207798423	(34395106)	+	MER63B	DNA/hAT-Blackjack	106	339	(97)	2210720
4511	8.9	3.0	0.2	chr2	207798424	207799038	(34394491)	+	MER41B	LTR/ERV1	1	633	(1)	2210721
3211	14.0	2.0	0.4	chr2	208541800	208542329	(33651200)	C	LTR45C	LTR/ERV1	(0)	539	1	2211990
512	11.5	1.3	0.0	chr2	208542346	208542423	(33651106)	+	MADE1	DNA/TcMar-Mariner	1	79	(1)	2211991
477	22.1	2.6	0.9	chr2	208929415	208929528	(33264001)	+	ERVL-E-int	LTR/ERVL	2771	2886	(2340)	2212405
1670	32.7	5.2	2.0	chr2	208929530	208930274	(33263255)	+	ERVL-E-int	LTR/ERVL	3484	4253	(1414)	2212405
2012	23.3	12.1	3.6	chr2	215870062	215870559	(26322970)	+	MLT1F	LTR/ERVL-MaLR	3	548	(0)	2221762
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
202	37.6	7.6	0.5	chr2	216545658	216545876	(25647653)	C	L2	LINE/L2	(1117)	2302	2067	2222952
3554	11.8	12.9	2.1	chr2	216608199	216608762	(25584767)	C	MER41B	LTR/ERV1	(0)	634	1	2223099
2228	11.2	0.0	0.0	chr2	216608830	216609116	(25584413)	C	AluSx	SINE/Alu	(23)	289	3	2223100
21	6.8	0.0	0.0	chr2	219514387	219514417	(22679112)	+	(CGCT)n	Simple_repeat	1	31	(0)	2228053
15	21.4	0.0	0.0	chr2	219514495	219514532	(22678997)	+	(AGCAGC)n	Simple_repeat	1	38	(0)	2228054
428	30.9	1.4	0.7	chr2	222805904	222806040	(19387489)	C	Tigger17c	DNA/TcMar-Tigger	(1050)	138	1	2233237
302	29.8	5.3	0.0	chr2	222806189	222806312	(19387217)	+	MIRc	SINE/MIR	70	200	(68)	2233238
18	20.6	1.9	1.9	chr2	222806327	222806378	(19387151)	+	A-rich	Low_complexity	1	53	(0)	2233239
2103	11.9	6.2	0.0	chr2	230654434	230654769	(11538760)	C	MER51B	LTR/ERV1	(19)	358	1	2245452
4276	6.1	2.5	0.9	chr2	230654862	230655291	(11538238)	+	MER41A	LTR/ERV1	1	436	(118)	2245453
26	21.8	7.8	0.9	chr2	230712975	230713077	(11480452)	+	(CCGCAG)n	Simple_repeat	1	111	(0)	2245575
266	27.5	1.1	8.1	chr2	231347293	231347391	(10846138)	C	L2c	LINE/L2	(10)	3377	3286	2246713
37	20.0	4.1	0.0	chr2	231604662	231604758	(10588771)	+	(CCGGC)n	Simple_repeat	1	101	(0)	2247244
17	10.0	3.1	0.0	chr2	232503174	232503205	(9690324)	+	(CCGCCC)n	Simple_repeat	1	33	(0)	2248757
2291	10.4	9.2	2.1	chr2	233217887	233218268	(8975261)	C	LTR9	LTR/ERV1	(175)	437	26	2250114
326	8.5	0.0	0.0	chr2	233218269	233218315	(8975214)	+	LTR7B	LTR/ERV1	1	47	(417)	2250115
289	29.3	9.7	2.1	chr2	233868462	233868747	(8324782)	C	L1M5	LINE/L1	(2848)	3298	2989	2251040
1805	19.9	5.7	2.9	chr2	235461369	235461812	(6731717)	+	MLT1C	LTR/ERVL-MaLR	9	465	(2)	2253664
1830	17.2	0.0	0.0	chr2	235462122	235462405	(6731124)	C	AluJr	SINE/Alu	(1)	311	28	2253665
3857	9.6	2.5	0.9	chr2	237939676	237940080	(4253449)	C	MER61E	LTR/ERV1	(4)	565	155	2257098
1726	9.0	0.4	0.0	chr2	237940081	237940339	(4253190)	C	AluSp	SINE/Alu	(0)	313	50	2257099
3939	12.7	5.5	0.2	chr2	237964102	237964701	(4228828)	C	MER41B	LTR/ERV1	(0)	634	1	2257155
5181	10.9	3.9	2.9	chr2	237964702	237964854	(4228675)	+	MER4D1	LTR/ERV1	750	899	(1)	2257153
1728	18.6	4.8	1.8	chr2	238425374	238425757	(3767772)	C	L1MB2	LINE/L1	(7)	6164	5769	2257803
414	19.8	3.6	0.1	chr2	238425732	238425841	(3767688)	C	L1MB2	LINE/L1	(1943)	5842	5733	2257803
409	24.4	25.5	0.9	chr2	238505483	238505710	(3687819)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	212	2257903
331	22.2	2.4	2.4	chr2	238505722	238505804	(3687725)	+	MLT1D	LTR/ERVL-MaLR	1	83	(544)	2257904
1583	11.8	10.8	4.4	chr2	238505828	238506120	(3687409)	C	MER1B	DNA/hAT-Charlie	(23)	316	3	2257905
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
19	26.0	0.0	6.1	chr2	241315875	241315960	(877569)	+	G-rich	Low_complexity	1	80	(0)	2260963
12	20.4	5.6	3.5	chr2	241637639	241637692	(555837)	+	(GCGTC)n	Simple_repeat	1	57	(0)	2261473
55	0.0	0.0	0.0	chr2	241881595	241881641	(311888)	+	(GT)n	Simple_repeat	1	47	(0)	2261811
12	21.8	2.7	0.0	chr20	325406	325442	(64118725)	+	(GCCCGA)n	Simple_repeat	1	38	(0)	2262664
23	8.9	0.0	0.0	chr20	372123	372158	(64072009)	+	(AAGG)n	Simple_repeat	1	36	(0)	2262785
2118	10.3	2.1	0.0	chr20	372543	372823	(64071344)	+	AluSz	SINE/Alu	1	287	(25)	2262787
609	27.5	2.5	3.0	chr20	372824	372972	(64071195)	+	MIRb	SINE/MIR	71	218	(50)	2262786
324	31.9	8.0	0.7	chr20	373418	373556	(64070611)	C	MIR	SINE/MIR	(85)	177	28	2262788
421	30.7	7.8	2.4	chr20	373504	373710	(64070457)	+	MIRb	SINE/MIR	19	237	(31)	2262791
3189	16.7	18.9	0.9	chr20	401715	402163	(64042004)	C	MER44D	DNA/TcMar-Tigger	(163)	542	8	2262862
912	7.5	0.0	0.0	chr20	402402	402508	(64041659)	+	AluSq2	SINE/Alu	207	313	(0)	2262864
544	27.4	3.0	5.2	chr20	1201981	1202153	(63242014)	+	L2a	LINE/L2	3258	3426	(0)	2264607
4271	8.4	1.4	0.0	chr20	1202180	1202725	(63241442)	+	MER41A	LTR/ERV1	1	554	(0)	2264608
3372	13.9	2.0	4.7	chr20	1214382	1214954	(63229213)	C	MER41D	LTR/ERV1	(0)	557	1	2264636
2319	22.1	10.5	1.6	chr20	1214955	1215011	(63229156)	C	Arthur1	DNA/hAT-Tip100	(766)	3181	3128	2264635
3115	25.4	6.1	1.6	chr20	1215008	1215872	(63228295)	C	Arthur1	DNA/hAT-Tip100	(3037)	910	5	2264637
2442	9.7	0.0	0.0	chr20	3117710	3118018	(61326149)	+	AluSx1	SINE/Alu	1	309	(3)	2268240
861	17.2	7.0	1.8	chr20	3118019	3118181	(61325986)	+	AluSx3	SINE/Alu	133	304	(7)	2268241
2079	14.5	0.3	0.0	chr20	3118191	3118486	(61325681)	+	AluSx1	SINE/Alu	1	297	(15)	2268242
17	16.0	0.0	0.0	chr20	3470925	3470959	(60973208)	+	(CGCA)n	Simple_repeat	1	35	(0)	2268952
3883	9.3	3.1	2.5	chr20	3665872	3666037	(60778130)	C	MER41A	LTR/ERV1	(377)	177	1	2269281
27	18.6	1.8	0.0	chr20	4038092	4038146	(60406021)	+	(TG)n	Simple_repeat	1	56	(0)	2269999
213	23.6	1.4	5.3	chr20	4075064	4075139	(60369028)	+	L2	LINE/L2	2709	2781	(638)	2270077
16	8.1	10.3	0.0	chr20	4221630	4221668	(60222499)	+	(CTGCGCG)n	Simple_repeat	1	43	(0)	2270389
13	15.2	0.0	3.2	chr20	5611040	5611070	(58833097)	+	G-rich	Low_complexity	1	31	(0)	2272846
2609	18.3	5.8	2.1	chr20	5634531	5635065	(58809102)	C	MER21A	LTR/ERVL	(0)	931	376	2272911
2441	11.2	1.1	2.4	chr20	5635083	5635517	(58808650)	+	MER41A	LTR/ERV1	1	469	(165)	2272912
38	6.5	4.3	2.8	chr20	6714145	6714213	(57729954)	+	(AAGA)n	Simple_repeat	1	72	(0)	2274839
3636	14.1	2.2	7.4	chr20	7893183	7893912	(56550255)	+	LTR8	LTR/ERV1	1	691	(0)	2276479
2791	8.8	1.2	0.0	chr20	8973159	8973554	(55470613)	+	MER41A	LTR/ERV1	1	401	(153)	2278153
1808	10.6	2.5	0.7	chr20	9025818	9026094	(55418073)	+	LTR8	LTR/ERV1	1	282	(409)	2278256
14	27.3	0.0	0.0	chr20	17453780	17453823	(46990344)	+	(CGGCGA)n	Simple_repeat	1	44	(0)	2290894
618	26.6	3.9	9.1	chr20	18793954	18794451	(45649716)	+	MLT2F	LTR/ERVL	5	663	(0)	2293236
3177	16.3	9.2	1.2	chr20	19223452	19224097	(45220070)	C	MER44D	DNA/TcMar-Tigger	(2)	703	1	2293817
7870	6.8	0.5	0.2	chr20	25233838	25234802	(39209365)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2301877
2497	24.5	4.1	5.4	chr20	25234803	25235369	(39208798)	C	L1ME2	LINE/L1	(31)	6133	5574	2301876
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
492	22.8	2.1	6.9	chr20	29781691	29781893	(34662274)	+	L1MEc	LINE/L1	2112	2304	(4096)	2304537
358	30.6	5.5	3.1	chr20	31505773	31506001	(32938166)	C	L1ME5	LINE/L1	(0)	6194	5960	2306132
3702	10.2	0.2	0.2	chr20	31506028	31506546	(32937621)	+	MER41B	LTR/ERV1	1	519	(115)	2306133
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
188	24.3	14.4	1.8	chr20	31610981	31611089	(32833078)	+	MIR3	SINE/MIR	8	132	(76)	2306404
289	33.1	0.8	3.3	chr20	31661986	31662122	(32782045)	C	MIR	SINE/MIR	(46)	162	29	2306560
235	36.1	6.6	0.0	chr20	31662140	31662294	(32781873)	+	L2b	LINE/L2	2725	2890	(529)	2306561
516	19.1	12.2	0.0	chr20	31671672	31671786	(32772381)	+	MER106A	DNA/hAT-Charlie	5	135	(101)	2306587
1002	25.5	0.9	0.9	chr20	31676226	31676447	(32767720)	C	MIR	SINE/MIR	(24)	238	17	2306602
16	21.1	0.0	0.0	chr20	31723838	31723875	(32720292)	+	(GCCT)n	Simple_repeat	1	38	(0)	2306714
4348	7.6	0.5	0.0	chr20	32005709	32006259	(32437908)	C	MER41A	LTR/ERV1	(0)	554	1	2307390
2122	12.5	0.5	8.2	chr20	32006260	32006375	(32437792)	C	MLT1B	LTR/ERVL-MaLR	(122)	268	178	2307389
2110	12.2	0.7	0.0	chr20	32006376	32006663	(32437504)	C	AluSx	SINE/Alu	(3)	309	20	2307391
1511	20.8	2.0	0.3	chr20	33459970	33460100	(30984067)	+	AluJb	SINE/Alu	5	135	(177)	2310788
565	12.8	3.4	0.0	chr20	33489534	33489619	(30954548)	C	AluJb	SINE/Alu	(223)	89	1	2310879
14	23.5	4.3	4.1	chr20	33686518	33686587	(30757580)	+	(GCGGC)n	Simple_repeat	1	73	(0)	2311337
312	34.3	9.4	1.9	chr20	33690170	33690346	(30753821)	+	MIRb	SINE/MIR	2	204	(64)	2311349
226	28.9	7.7	6.6	chr20	33690349	33690473	(30753694)	+	MER102a	DNA/hAT-Charlie	1	134	(196)	2311350
21	26.9	2.1	4.1	chr20	33811326	33811395	(30632772)	+	(GCGGAG)n	Simple_repeat	1	69	(0)	2311672
416	29.4	16.5	1.5	chr20	34085705	34085977	(30358190)	+	L2c	LINE/L2	2929	3250	(137)	2312289
1686	11.7	5.9	1.1	chr20	34322621	34322896	(30121271)	+	MER57B1	LTR/ERV1	3	292	(109)	2312779
3835	11.2	4.0	1.2	chr20	34322917	34323398	(30120769)	+	MER41B	LTR/ERV1	13	508	(126)	2312780
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
235	28.2	0.2	0.0	chr20	34956053	34956125	(29488042)	C	MIRc	SINE/MIR	(130)	138	62	2314221
194	29.0	4.6	0.0	chr20	34956154	34956215	(29487952)	C	MIR3	SINE/MIR	(114)	94	30	2314221
2039	13.6	0.3	0.0	chr20	35120076	35120362	(29323805)	C	AluSz6	SINE/Alu	(24)	288	1	2314564
43	17.6	0.0	1.2	chr20	35285849	35285934	(29158233)	+	(GAT)n	Simple_repeat	1	86	(0)	2314940
15	0.0	0.0	0.0	chr20	35285933	35285949	(29158218)	+	(TG)n	Simple_repeat	1	17	(0)	2314941
189	29.1	7.0	7.5	chr20	35285967	35286197	(29157970)	+	L2a	LINE/L2	2993	3213	(174)	2314942
995	15.0	0.6	1.2	chr20	35615571	35615730	(28828437)	+	FRAM	SINE/Alu	1	159	(17)	2315685
202	28.8	15.7	0.8	chr20	35665105	35665223	(28778944)	+	MIRb	SINE/MIR	55	194	(74)	2315758
14	21.0	3.9	1.9	chr20	35772336	35772386	(28671781)	+	G-rich	Low_complexity	1	53	(0)	2316011
2161	17.8	9.2	3.3	chr20	36083085	36083264	(28360903)	+	MLT2B1	LTR/ERVL	268	490	(30)	2316807
3733	7.5	0.9	10.3	chr20	36083265	36083722	(28360445)	+	MER41A	LTR/ERV1	1	463	(91)	2316809
421	24.8	11.7	3.7	chr20	37378374	37378507	(27065660)	C	MIRb	SINE/MIR	(4)	264	119	2319891
2151	14.1	2.8	3.0	chr20	37542174	37542568	(26901599)	C	LTR47A2	LTR/ERVL	(38)	394	1	2320221
1259	16.9	8.3	10.4	chr20	37542579	37542703	(26901464)	+	L1ME2z	LINE/L1	6071	6200	(244)	2320220
2230	11.0	0.0	0.0	chr20	37542704	37542993	(26901174)	+	AluSz	SINE/Alu	1	290	(22)	2320222
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
1063	11.9	0.6	8.8	chr20	38446271	38446464	(25997703)	C	MLT1A0	LTR/ERVL-MaLR	(9)	356	179	2322192
433	28.6	5.3	3.0	chr20	38805292	38805457	(25638710)	+	MIRb	SINE/MIR	27	196	(72)	2322914
489	21.4	11.5	3.7	chr20	38854579	38854714	(25589453)	+	MIRb	SINE/MIR	15	162	(106)	2323017
4293	12.9	0.3	0.5	chr20	40948257	40948880	(23495287)	C	MER41B	LTR/ERV1	(9)	625	3	2326752
211	29.7	10.6	5.6	chr20	43690987	43691111	(20753056)	C	MIR	SINE/MIR	(27)	235	104	2331757
359	16.5	11.2	2.5	chr20	43962544	43962624	(20481543)	+	L2a	LINE/L2	3338	3426	(0)	2332352
1360	19.0	2.1	7.0	chr20	43962792	43963140	(20481027)	C	MER33	DNA/hAT-Charlie	(0)	324	15	2332353
558	28.4	4.0	2.3	chr20	46574234	46574406	(17869761)	+	MIR	SINE/MIR	22	197	(65)	2337925
420	21.7	1.1	0.0	chr20	46574459	46574550	(17869617)	C	MER96	DNA/hAT-Tip100	(82)	93	1	2337926
2331	10.4	0.0	1.9	chr20	47199725	47199925	(17244242)	C	AluSx1	SINE/Alu	(0)	312	112	2339468
4383	5.2	0.9	1.2	chr20	47199926	47200485	(17243682)	+	LTR6B	LTR/ERV1	1	558	(0)	2339469
2156	9.8	0.0	5.8	chr20	47362122	47362447	(17081720)	C	AluSz	SINE/Alu	(5)	307	1	2339819
613	26.9	4.4	13.6	chr20	47362448	47362715	(17081452)	+	L2	LINE/L2	2795	3063	(356)	2339817
319	22.9	22.4	0.0	chr20	47501517	47501634	(16942533)	+	MIR	SINE/MIR	111	262	(0)	2340295
331	28.6	1.6	2.3	chr20	47950908	47951036	(16493131)	C	MER74A	LTR/ERVL	(14)	544	417	2341175
571	20.0	0.7	0.2	chr20	48124324	48126459	(16317708)	+	D20S16	Satellite	1	2147	(2)	2341504
4551	11.9	0.6	0.3	chr20	48139141	48139772	(16304395)	C	MER41B	LTR/ERV1	(0)	634	1	2341528
224	38.8	8.8	3.9	chr20	48139773	48139983	(16304184)	C	L2c	LINE/L2	(146)	3241	3020	2341527
219	11.8	0.0	0.0	chr20	49790684	49790717	(14653450)	C	L2a	LINE/L2	(0)	3426	3393	2345347
1403	14.1	0.3	14.1	chr20	49935754	49936114	(14508053)	+	AluJo	SINE/Alu	1	311	(1)	2345667
14	26.0	0.0	3.7	chr20	49936321	49936374	(14507793)	+	(GCCCCCC)n	Simple_repeat	1	54	(0)	2345668
1659	13.2	2.6	9.8	chr20	50070892	50071218	(14372949)	+	AluJr	SINE/Alu	10	312	(0)	2346021
297	30.1	8.3	2.7	chr20	50116121	50116267	(14327900)	+	MIR	SINE/MIR	107	262	(0)	2346116
22	12.6	4.4	0.0	chr20	50166362	50166406	(14277761)	+	(CTTCT)n	Simple_repeat	1	47	(0)	2346248
18	15.0	4.1	3.9	chr20	50190916	50190964	(14253203)	+	(GCA)n	Simple_repeat	1	51	(0)	2346323
364	29.2	10.4	1.3	chr20	50293048	50293196	(14150971)	C	MIRb	SINE/MIR	(21)	247	84	2346568
313	28.5	21.3	0.0	chr20	50293217	50293360	(14150807)	C	MIR	SINE/MIR	(65)	197	15	2346569
457	23.9	5.6	5.6	chr20	50308410	50308551	(14135616)	+	MIRc	SINE/MIR	57	198	(70)	2346607
1044	27.6	9.8	3.9	chr20	50441554	50442010	(14002157)	C	MLT1L	LTR/ERVL-MaLR	(122)	488	2	2346942
245	29.2	11.3	7.5	chr20	50483434	50483688	(13960479)	C	LTR16C	LTR/ERVL	(150)	339	74	2347066
2451	9.2	0.0	0.0	chr20	50499165	50499467	(13944700)	+	AluSc	SINE/Alu	2	304	(5)	2347111
804	29.4	8.2	8.9	chr20	50499468	50499691	(13944476)	C	MLT1J	LTR/ERVL-MaLR	(288)	224	13	2347110
322	26.6	0.0	0.0	chr20	50499702	50499780	(13944387)	C	LTR104_Mam	LTR/Gypsy	(412)	1097	1019	2347112
2301	14.3	9.6	5.9	chr20	50508654	50509117	(13935050)	C	LTR54	LTR/ERV1	(0)	510	29	2347138
2101	9.3	2.7	3.3	chr20	50509118	50509417	(13934750)	C	AluSq	SINE/Alu	(15)	298	1	2347139
497	22.0	10.2	14.3	chr20	50636265	50636481	(13807686)	+	MamRep38	DNA/hAT	1	207	(88)	2347340
21	22.7	1.5	3.0	chr20	50931286	50931350	(13512817)	+	(CGG)n	Simple_repeat	1	66	(0)	2348044
1914	13.7	2.3	0.0	chr20	51033393	51033728	(13410439)	+	L1MB2	LINE/L1	5800	6143	(28)	2348258
48	0.0	0.0	0.0	chr20	51033729	51033769	(13410398)	+	(TG)n	Simple_repeat	1	41	(0)	2348259
913	19.7	14.0	1.3	chr20	51033792	51034027	(13410140)	+	LTR40b	LTR/ERVL	184	454	(8)	2348257
367	27.8	8.9	1.5	chr20	51034086	51034136	(13410031)	+	L2c	LINE/L2	3240	3293	(94)	2348253
2212	10.0	0.0	0.3	chr20	51034137	51034437	(13409730)	C	AluSx1	SINE/Alu	(12)	300	1	2348260
4331	10.9	0.6	6.2	chr20	51338509	51339180	(13104987)	C	MER41B	LTR/ERV1	(0)	634	1	2348941
646	26.2	15.5	0.0	chr20	51339197	51339398	(13104769)	C	MIR	SINE/MIR	(11)	251	13	2348942
2439	10.8	6.9	0.3	chr20	52210360	52210739	(12233428)	C	MER48	LTR/ERV1	(0)	407	1	2351019
34	3.0	0.0	0.0	chr20	52291381	52291414	(12152753)	+	(TG)n	Simple_repeat	1	34	(0)	2351193
251	20.9	8.7	14.2	chr20	52291588	52291721	(12152446)	C	LTR88b	LTR/Gypsy?	(33)	804	679	2351194
3510	12.8	4.6	0.0	chr20	55103003	55103542	(9340625)	C	MER61E	LTR/ERV1	(3)	566	1	2356846
24	23.1	0.0	2.9	chr20	56468525	56468593	(7975574)	+	(GCCCC)n	Simple_repeat	1	69	(0)	2359091
841	8.6	0.0	1.7	chr20	57350954	57351071	(7093096)	C	AluSx	SINE/Alu	(196)	116	1	2361034
11	36.0	1.1	3.4	chr20	57390012	57390098	(7054069)	+	G-rich	Low_complexity	1	88	(0)	2361090
24	24.8	1.1	4.5	chr20	57709861	57709948	(6734219)	+	(CGC)n	Simple_repeat	1	89	(0)	2361623
341	28.9	4.5	0.8	chr20	58252144	58252272	(6191895)	C	MIR	SINE/MIR	(58)	204	71	2362642
2254	14.2	7.8	1.5	chr20	58256752	58257150	(6187017)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	2362650
3346	23.6	8.8	3.2	chr20	58257151	58257250	(6186917)	+	L1M4a1	LINE/L1	2103	2203	(376)	2362649
17	9.2	5.7	0.0	chr20	58652188	58652222	(5791945)	+	(TCTG)n	Simple_repeat	1	37	(0)	2363299
13	14.8	5.1	2.4	chr20	58652228	58652266	(5791901)	+	(AAGAT)n	Simple_repeat	1	41	(0)	2363300
21	15.5	1.9	3.6	chr20	58888945	58888998	(5555169)	+	(CGCGCC)n	Simple_repeat	1	55	(0)	2363577
2305	10.4	0.0	1.0	chr20	59012000	59012308	(5431859)	C	AluSq2	SINE/Alu	(7)	306	1	2363807
4360	11.5	1.3	2.2	chr20	59012309	59012469	(5431698)	C	MER41B	LTR/ERV1	(478)	156	1	2363806
4296	15.7	5.7	10.7	chr20	62088525	62088842	(2355325)	+	Tigger3b	DNA/TcMar-Tigger	1	290	(941)	2368103
485	28.4	8.2	7.4	chr20	62146399	62146605	(2297562)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	178	2368194
17	29.3	5.9	2.4	chr20	62794409	62794526	(1649641)	+	(CGACCC)n	Simple_repeat	1	125	(0)	2368958
724	24.8	9.3	3.5	chr20	62794763	62794890	(1649277)	C	L1MB7	LINE/L1	(9)	6175	6030	2368959
2275	9.4	1.0	0.0	chr20	62794891	62795188	(1648979)	+	AluSx1	SINE/Alu	1	301	(11)	2368960
2443	7.1	0.0	0.0	chr20	62862278	62862573	(1581594)	+	AluSg	SINE/Alu	1	296	(14)	2369034
1878	17.1	15.1	7.1	chr20	63263983	63264209	(1179958)	C	LTR54	LTR/ERV1	(275)	235	1	2369433
13	19.6	4.0	3.9	chr20	63272867	63272916	(1171251)	+	(GCCCT)n	Simple_repeat	1	52	(0)	2369449
12	15.6	4.2	6.0	chr20	63520747	63520794	(923373)	+	(GCGCGTC)n	Simple_repeat	1	50	(0)	2369661
21	20.0	6.6	1.2	chr20	63520894	63520933	(923234)	+	(GGCGAGG)n	Simple_repeat	1	78	(0)	2369662
200	26.2	6.2	0.0	chr20	63658031	63658091	(786076)	C	L2c	LINE/L2	(685)	2734	2670	2369855
15	4.1	0.0	6.9	chr20	64063098	64063126	(381041)	+	(GCGG)n	Simple_repeat	1	29	(0)	2370474
17	21.1	0.0	2.2	chr21	5244422	5244467	(41465516)	+	(TCAT)n	Simple_repeat	1	46	(0)	2370983
6271	20.2	7.0	7.7	chr21	10412525	10414341	(36295642)	+	REP522	Satellite/telo	14	1817	(0)	2375506
328	35.1	8.8	7.3	chr21	14753561	14753996	(31955987)	+	L1MB1	LINE/L1	1809	2251	(5235)	2378267
3028	24.4	5.6	1.8	chr21	14754141	14755216	(31954767)	+	L1MB1	LINE/L1	1984	3045	(5393)	2378267
353	30.7	5.0	6.7	chr21	15193874	15194076	(31515907)	C	MamGypLTR3	LTR/Gypsy	(83)	898	642	2378797
4012	14.0	2.7	1.8	chr21	17690240	17690866	(29019117)	+	MER41B	LTR/ERV1	1	633	(1)	2382065
1357	26.4	9.7	8.1	chr21	24272433	24273157	(22436826)	+	LTR19C	LTR/ERV1	1	779	(0)	2390888
3422	14.5	0.8	7.1	chr21	28791771	28792430	(17917553)	+	MER41B	LTR/ERV1	17	634	(0)	2397267
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
211	27.4	1.6	0.0	chr21	29074154	29074215	(17635768)	C	MIRb	SINE/MIR	(19)	249	187	2397697
491	29.2	2.2	1.4	chr21	29074299	29074461	(17635522)	C	MIR	SINE/MIR	(39)	169	3	2397697
2458	10.3	3.3	0.8	chr21	29641176	29641528	(17068455)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2398629
540	25.6	6.6	7.5	chr21	29641529	29641590	(17068393)	C	MIR	SINE/MIR	(168)	94	42	2398628
402	28.5	8.9	0.0	chr21	29641594	29641716	(17068267)	+	MER96	DNA/hAT-Tip100	5	139	(36)	2398630
499	32.1	6.7	8.3	chr21	29648527	29648862	(17061121)	C	L2a	LINE/L2	(0)	3426	3097	2398639
180	37.5	0.0	2.7	chr21	29656498	29656571	(17053412)	+	MER5A	DNA/hAT-Charlie	69	140	(49)	2398648
291	37.5	3.8	4.1	chr21	29656797	29657103	(17052880)	+	X6B_LINE	LINE/CR1	759	1065	(7)	2398649
1189	31.6	11.5	5.7	chr21	29659986	29660862	(17049121)	C	MamGypsy2-I	LTR/Gypsy	(196)	3970	3015	2398653
252	33.1	9.5	4.3	chr21	29953617	29953894	(16756089)	C	L2	LINE/L2	(590)	2829	2536	2399120
11	11.0	12.8	0.0	chr21	31659245	31659283	(15050700)	+	A-rich	Low_complexity	1	44	(0)	2401849
14	22.1	2.0	3.9	chr21	32727802	32727852	(13982131)	+	(CTCCCG)n	Simple_repeat	1	52	(0)	2403671
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
3418	16.0	5.5	1.2	chr21	33234740	33235350	(13474633)	C	MER41B	LTR/ERV1	(38)	596	1	2404561
1097	18.6	13.1	2.1	chr21	33235480	33235644	(13474339)	C	MER45B	DNA/hAT-Tip100	(2)	1038	850	2404562
705	14.4	30.0	0.0	chr21	33300620	33300799	(13409184)	+	MLT1A0	LTR/ERVL-MaLR	1	257	(108)	2404689
681	8.1	0.0	0.0	chr21	33300804	33300889	(13409094)	+	MER41B	LTR/ERV1	3	88	(546)	2404690
287	19.7	0.0	2.9	chr21	33300891	33300958	(13409025)	+	MLT1A0	LTR/ERVL-MaLR	402	467	(0)	2404689
2419	12.7	1.6	7.3	chr21	33441931	33442071	(13267912)	C	MER65A	LTR/ERV1	(323)	122	1	2404983
2021	10.4	1.0	0.7	chr21	33541135	33541422	(13168561)	C	AluSz	SINE/Alu	(0)	312	24	2405203
186	23.0	6.5	4.4	chr21	33541606	33541696	(13168287)	+	MIRc	SINE/MIR	67	159	(109)	2405204
16	0.0	0.0	7.1	chr21	33916176	33916203	(12793780)	+	(ACAAA)n	Simple_repeat	1	28	(0)	2405811
504	24.7	10.0	1.6	chr21	34030010	34030338	(12679645)	C	MLT1J2	LTR/ERVL-MaLR	(22)	426	1	2406026
652	26.4	6.3	4.0	chr21	34030341	34030589	(12679394)	+	MLT1L	LTR/ERVL-MaLR	344	598	(12)	2406027
3209	19.2	2.2	0.8	chr21	34639893	34640513	(12069470)	C	L1MB4	LINE/L1	(6)	6174	5545	2406957
472	19.3	16.2	3.4	chr21	34640531	34640707	(12069276)	C	MLT1K	LTR/ERVL-MaLR	(54)	541	338	2406958
32	7.7	0.0	0.0	chr21	34908929	34908969	(11801014)	+	(GT)n	Simple_repeat	1	41	(0)	2407332
535	32.4	16.8	3.4	chr21	35102714	35103788	(11606195)	C	L3b	LINE/CR1	(1676)	2423	1176	2407611
2187	10.6	10.3	1.2	chr21	36005108	36005443	(10704540)	+	MER48	LTR/ERV1	38	407	(0)	2408978
2108	16.1	8.1	0.5	chr21	36061291	36061701	(10648282)	C	MER65A	LTR/ERV1	(0)	445	1	2409068
1310	10.6	2.1	2.6	chr21	36061702	36061805	(10648178)	C	MER2	DNA/TcMar-Tigger	(87)	258	155	2409067
1026	7.8	0.7	0.0	chr21	36061806	36061946	(10648037)	C	LTR5B	LTR/ERVK	(0)	1002	861	2409069
2059	14.4	8.8	12.3	chr21	36327452	36327874	(10382109)	C	LTR54	LTR/ERV1	(50)	460	22	2409624
2218	12.3	0.0	0.0	chr21	36327875	36328175	(10381808)	C	AluSz	SINE/Alu	(10)	302	2	2409628
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
13	21.7	0.0	0.0	chr21	37366867	37366898	(9343085)	+	(GGC)n	Simple_repeat	1	32	(0)	2411469
4566	17.3	3.5	6.2	chr21	37566375	37566986	(9142997)	C	MER49	LTR/ERV1	(35)	888	269	2411795
2728	12.6	16.0	4.4	chr21	37566987	37567526	(9142457)	+	LTR18B	LTR/ERVL	1	614	(0)	2411798
2018	19.8	3.8	0.7	chr21	38121187	38121599	(8588384)	C	LTR9	LTR/ERV1	(0)	612	187	2412613
215	33.3	12.5	1.1	chr21	38797670	38797860	(7912123)	+	MIRc	SINE/MIR	47	262	(6)	2413529
183	19.4	0.0	0.0	chr21	38797933	38797963	(7912020)	+	MIR	SINE/MIR	80	110	(152)	2413530
191	17.1	0.0	0.0	chr21	38798025	38798059	(7911924)	+	AmnSINE1	SINE/5S-Deu-L2	541	575	(0)	2413531
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
1805	12.8	1.1	0.0	chr21	39349731	39349988	(7359995)	C	AluJb	SINE/Alu	(22)	290	30	2414412
8432	7.5	2.5	0.0	chr21	39358522	39359592	(7350391)	+	PRIMA41-int	LTR/ERV1	6659	7756	(0)	2414432
2415	9.8	1.1	5.7	chr21	39359593	39359961	(7350022)	+	MER41C	LTR/ERV1	1	352	(169)	2414432
262	20.9	16.5	1.1	chr21	41847379	41847465	(4862518)	C	MIR1_Amn	SINE/MIR	(64)	166	64	2418069
1543	20.1	8.4	0.0	chr21	41894972	41895319	(4814664)	+	MLT2C1	LTR/ERVL	18	397	(0)	2418133
12	9.2	0.0	4.0	chr21	42010306	42010330	(4699653)	+	(CGC)n	Simple_repeat	1	25	(0)	2418306
21	23.4	5.6	2.1	chr21	42010422	42010510	(4699473)	+	G-rich	Low_complexity	1	94	(0)	2418307
210	39.4	4.1	0.0	chr21	42434190	42434283	(4275700)	C	MIRb	SINE/MIR	(137)	131	34	2418869
3942	11.8	1.4	5.2	chr21	42935862	42936444	(3773539)	+	Harlequin-int	LTR/ERV1	6263	6828	(68)	2419593
4769	3.4	0.4	0.0	chr21	42936445	42937000	(3772983)	+	LTR6B	LTR/ERV1	1	558	(0)	2419595
3573	9.1	0.4	0.2	chr21	42955409	42955905	(3754078)	C	HERVE-int	LTR/ERV1	(2636)	5177	4680	2419614
3871	10.8	4.0	10.2	chr21	42971099	42971776	(3738207)	+	MER41B	LTR/ERV1	1	634	(0)	2419659
2196	10.6	0.7	1.0	chr21	42972547	42972848	(3737135)	C	AluSz	SINE/Alu	(11)	301	1	2419662
3679	14.9	1.3	7.1	chr21	42972849	42973199	(3736784)	C	MER41B	LTR/ERV1	(277)	357	1	2419661
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
26	3.1	3.0	0.0	chr21	43719206	43719238	(2990745)	+	(GAGCCC)n	Simple_repeat	1	34	(0)	2420696
13	19.5	0.0	2.7	chr21	43719258	43719294	(2990689)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2420697
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
4076	7.6	2.2	0.7	chr21	43859631	43860176	(2849807)	C	MER41A	LTR/ERV1	(0)	554	1	2420939
858	25.3	6.5	9.6	chr21	43913847	43914177	(2795806)	C	Charlie1a	DNA/hAT-Charlie	(91)	1364	1042	2421033
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
4420	26.2	7.0	1.9	chr21	45065695	45067517	(1642466)	+	L1ME3A	LINE/L1	3795	5710	(463)	2422486
921	28.0	3.1	2.2	chr21	45067523	45067840	(1642143)	+	L1ME3A	LINE/L1	5850	6170	(3)	2422486
13	7.7	0.0	9.1	chr21	45287900	45287932	(1422051)	+	(GCCCC)n	Simple_repeat	1	33	(0)	2422706
59	1.9	0.0	0.0	chr21	45646054	45646108	(1063875)	+	(TC)n	Simple_repeat	1	55	(0)	2423036
35	0.0	0.0	0.0	chr21	45646109	45646146	(1063837)	+	(GT)n	Simple_repeat	1	38	(0)	2423037
617	16.4	15.8	7.1	chr21	46634904	46635087	(74896)	C	MER4B	LTR/ERV1	(399)	211	9	2424208
21	16.0	4.1	0.0	chr22	16601252	16601300	(34217168)	+	(CCGGAG)n	Simple_repeat	1	51	(0)	2427582
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
822	22.0	15.3	2.9	chr22	17628986	17629083	(33189385)	C	L1MC3	LINE/L1	(340)	7655	7516	2429398
2470	8.6	0.3	5.2	chr22	17673350	17673676	(33144792)	C	AluY	SINE/Alu	(0)	311	1	2429519
354	28.1	3.2	0.0	chr22	17847436	17847556	(32970912)	C	L2a	LINE/L2	(2)	3424	3300	2429809
3580	17.7	4.3	3.2	chr22	19109050	19109781	(31708687)	+	L1MB2	LINE/L1	5402	6145	(26)	2431458
19	18.5	6.3	1.5	chr22	19122417	19122479	(31695989)	+	(GCCGC)n	Simple_repeat	1	67	(0)	2431480
270	32.3	9.9	1.3	chr22	19184151	19184307	(31634161)	C	MIR	SINE/MIR	(22)	240	69	2431577
4172	22.1	8.4	3.2	chr22	19212591	19213963	(31604505)	+	L1MD2	LINE/L1	4710	6176	(3)	2431615
2287	8.4	0.0	0.0	chr22	19259102	19259387	(31559081)	C	AluSq2	SINE/Alu	(9)	304	19	2431682
14547	12.4	3.0	5.6	chr22	19259388	19260493	(31557975)	+	Tigger1	DNA/TcMar-Tigger	55	1181	(1237)	2431681
929	13.9	0.6	1.5	chr22	19299711	19299876	(31518592)	+	AluJb	SINE/Alu	1	320	(0)	2431758
3891	19.5	2.2	2.1	chr22	19299895	19300485	(31517983)	+	PRIMAX-int	LTR/ERV1	518	1121	(6492)	2431757
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
2286	12.2	0.0	0.0	chr22	19317024	19317327	(31501141)	+	AluSz	SINE/Alu	5	308	(4)	2431795
2384	9.4	0.0	0.0	chr22	19393357	19393655	(31424813)	C	AluSg	SINE/Alu	(11)	299	1	2431923
660	23.9	12.3	4.8	chr22	19393656	19393886	(31424582)	C	Charlie15b	DNA/hAT-Charlie	(136)	925	657	2431922
759	34.9	12.7	6.0	chr22	19403631	19404204	(31414264)	C	L1M5	LINE/L1	(2373)	3773	3138	2431935
876	25.5	19.5	2.6	chr22	19419272	19419722	(31398746)	+	L2a	LINE/L2	2871	3415	(11)	2431969
2435	8.3	0.0	0.3	chr22	19421016	19421316	(31397152)	+	AluSq2	SINE/Alu	1	300	(13)	2431975
47	27.5	3.6	3.9	chr22	19431483	19431707	(31386761)	+	(GCC)n	Simple_repeat	1	233	(0)	2431996
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
2304	7.5	0.7	0.0	chr22	19627681	19627985	(31190483)	C	AluYk4	SINE/Alu	(4)	307	1	2432340
272	35.3	9.5	4.5	chr22	19642537	19643108	(31175360)	C	L1ME3G	LINE/L1	(3)	6121	5520	2432365
1748	13.2	4.7	0.0	chr22	19643109	19643389	(31175079)	C	AluJb	SINE/Alu	(17)	295	1	2432366
323	31.8	4.2	3.3	chr22	19643390	19643622	(31174846)	C	L1ME3G	LINE/L1	(758)	166	18	2432365
185	34.0	4.5	2.8	chr22	19643821	19643929	(31174539)	C	MER5A	DNA/hAT-Charlie	(0)	189	79	2432367
9688	18.4	6.7	3.7	chr22	19648166	19648664	(31169804)	+	L1M4	LINE/L1	1398	1883	(5634)	2432369
32	5.4	0.0	0.0	chr22	19648665	19648703	(31169765)	+	(AACAA)n	Simple_repeat	1	39	(0)	2432373
9688	18.4	6.7	3.7	chr22	19648704	19649055	(31169413)	+	L1M4	LINE/L1	1884	2241	(5276)	2432369
240	27.2	9.4	5.3	chr22	19771702	19771833	(31046635)	+	MER104	DNA/TcMar-Tc2	5	142	(39)	2432519
1631	9.6	0.5	0.0	chr22	19772103	19772310	(31046158)	C	AluSx1	SINE/Alu	(12)	300	92	2432520
1940	10.5	2.7	5.9	chr22	19772311	19772615	(31045853)	C	AluJr	SINE/Alu	(17)	295	1	2432521
16	16.2	2.3	2.3	chr22	19941706	19941753	(30876715)	+	(GCGCCGC)n	Simple_repeat	1	48	(0)	2432712
12	20.7	0.0	2.9	chr22	19941852	19941886	(30876582)	+	(GCCGG)n	Simple_repeat	1	35	(0)	2432713
818	24.7	2.9	5.3	chr22	19943187	19943365	(30875103)	C	MER31-int	LTR/ERV1	(24)	4912	4731	2432714
1949	15.8	2.6	0.0	chr22	19943366	19943669	(30874799)	+	AluJr	SINE/Alu	1	312	(0)	2432715
7558	8.4	2.6	0.5	chr22	19947258	19948243	(30870225)	C	LTR13	LTR/ERVK	(0)	1007	1	2432723
418	31.0	2.1	0.0	chr22	20009857	20009998	(30808470)	+	MER58B	DNA/hAT-Charlie	186	330	(11)	2432788
17	21.9	4.5	5.4	chr22	20021145	20021232	(30797236)	+	(GGCTCCG)n	Simple_repeat	1	92	(0)	2432801
1952	10.6	0.0	11.1	chr22	20025052	20025392	(30793076)	C	AluSx	SINE/Alu	(9)	303	1	2432805
2285	7.8	0.0	1.0	chr22	20077144	20077470	(30740998)	C	AluSc8	SINE/Alu	(0)	311	1	2432886
1083	24.8	8.0	16.9	chr22	20077472	20078027	(30740441)	C	L1MC4	LINE/L1	(282)	7760	7246	2432887
1911	13.4	1.0	2.6	chr22	20079089	20079277	(30739191)	C	AluJr	SINE/Alu	(4)	308	123	2432891
2450	8.4	0.0	0.0	chr22	20079278	20079585	(30738883)	+	AluSx1	SINE/Alu	1	308	(4)	2432892
1911	13.4	1.0	2.6	chr22	20079586	20079708	(30738760)	C	AluJr	SINE/Alu	(190)	122	1	2432891
4396	10.7	14.0	2.2	chr22	20205678	20206413	(30612055)	C	LTR1A2	LTR/ERV1	(0)	837	1	2433014
12	19.3	4.7	2.2	chr22	20247180	20247222	(30571246)	+	G-rich	Low_complexity	1	45	(0)	2433042
312	32.8	9.4	2.9	chr22	20318294	20318572	(30499896)	+	L1MC5a	LINE/L1	2120	2418	(359)	2433105
14	16.4	2.9	0.0	chr22	20320135	20320168	(30498300)	+	(CCGCC)n	Simple_repeat	1	35	(0)	2433108
2659	19.5	1.8	0.0	chr22	20384220	20384757	(30433711)	C	L1MA7	LINE/L1	(755)	5388	4841	2433206
2354	10.8	0.0	0.0	chr22	20411706	20412010	(30406458)	+	AluSx1	SINE/Alu	1	305	(7)	2433262
290	35.0	7.2	2.7	chr22	20456204	20456388	(30362080)	+	L2a	LINE/L2	3228	3421	(5)	2433339
232	17.4	0.0	8.0	chr22	20546084	20546133	(30272335)	C	L1MC5a	LINE/L1	(345)	2432	2387	2433532
1492	15.9	9.5	0.4	chr22	20561733	20561990	(30256478)	+	AluJo	SINE/Alu	1	284	(28)	2433554
1056	18.9	0.0	2.2	chr22	20562004	20562183	(30256285)	+	AluJb	SINE/Alu	130	305	(7)	2433555
325	26.3	13.0	9.8	chr22	20562233	20562383	(30256085)	+	L1MEd	LINE/L1	2691	2847	(3367)	2433547
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
475	37.3	8.3	1.2	chr22	20699065	20699487	(30118981)	C	L1MEd	LINE/L1	(6017)	1069	614	2433772
2225	9.5	0.0	0.0	chr22	20754668	20754961	(30063507)	+	AluSg	SINE/Alu	1	294	(16)	2433858
909	11.8	0.0	0.0	chr22	20754962	20755088	(30063380)	C	FLAM_C	SINE/Alu	(16)	127	1	2433859
4151	22.0	9.3	4.7	chr22	20755089	20755492	(30062976)	C	L1MD3	LINE/L1	(882)	7113	6706	2433855
257	23.1	1.3	8.2	chr22	20777757	20777841	(30040627)	+	Tigger15a	DNA/TcMar-Tigger	39	117	(598)	2433915
2106	13.2	1.0	1.3	chr22	20785068	20785370	(30033098)	C	AluJr	SINE/Alu	(10)	302	1	2433928
266	22.6	45.0	4.9	chr22	20793917	20794065	(30024403)	C	MIRb	SINE/MIR	(0)	268	60	2433944
240	5.7	0.0	0.0	chr22	20794070	20794104	(30024364)	+	L1MA3	LINE/L1	6266	6300	(5)	2433945
991	13.5	0.7	0.7	chr22	20840735	20840875	(29977593)	+	AluJo	SINE/Alu	1	141	(171)	2434031
1623	7.1	0.0	0.0	chr22	20840880	20841090	(29977378)	+	MER41A	LTR/ERV1	1	211	(343)	2434032
1599	13.0	0.0	0.0	chr22	20891977	20892191	(29926277)	+	AluSx	SINE/Alu	76	290	(22)	2434144
2535	7.8	0.7	0.0	chr22	20892224	20892532	(29925936)	+	AluY	SINE/Alu	1	311	(0)	2434145
867	17.2	6.3	12.3	chr22	20892845	20892967	(29925501)	C	MER58B	DNA/hAT-Charlie	(0)	341	225	2434146
2162	11.3	2.0	0.0	chr22	20892968	20893259	(29925209)	+	AluSz	SINE/Alu	3	300	(12)	2434147
2114	13.4	0.0	0.7	chr22	20902601	20902905	(29915563)	+	AluSx1	SINE/Alu	1	303	(9)	2434177
867	18.2	0.0	0.0	chr22	21021144	21021275	(29797193)	C	FLAM_C	SINE/Alu	(10)	133	2	2434411
561	17.9	3.8	0.3	chr22	21036858	21036978	(29781490)	+	MER34	LTR/ERV1	433	571	(0)	2434431
516	26.2	5.9	6.8	chr22	21037010	21037077	(29781391)	+	MER34B-int	LTR/ERV1	65	135	(5221)	2434431
2507	5.0	0.0	1.0	chr22	21037078	21037376	(29781092)	C	AluY	SINE/Alu	(15)	296	1	2434433
1958	18.2	6.8	1.8	chr22	21037711	21038101	(29780367)	C	LTR24	LTR/ERV1	(33)	434	17	2434434
2040	13.7	0.3	0.0	chr22	21038102	21038393	(29780075)	+	AluJr	SINE/Alu	9	301	(11)	2434436
2108	14.9	0.0	0.0	chr22	21056221	21056516	(29761952)	+	AluSz	SINE/Alu	2	297	(15)	2434468
2097	11.2	3.7	0.0	chr22	21083681	21083965	(29734503)	+	AluSx1	SINE/Alu	1	296	(16)	2434526
2357	10.4	0.0	0.0	chr22	21555650	21555948	(29262520)	+	AluSz	SINE/Alu	1	299	(13)	2435409
1604	20.7	1.4	0.0	chr22	21555963	21556247	(29262221)	+	AluJb	SINE/Alu	11	299	(13)	2435410
1057	17.7	1.2	0.0	chr22	21556249	21556412	(29262056)	+	FRAM	SINE/Alu	1	166	(10)	2435411
1661	14.9	0.0	9.5	chr22	21556426	21556761	(29261707)	C	AluJb	SINE/Alu	(8)	304	1	2435412
364	30.5	12.9	5.0	chr22	21566600	21566848	(29251620)	+	L2b	LINE/L2	2822	3122	(253)	2435437
569	25.9	7.5	3.4	chr22	21566846	21567049	(29251419)	+	MIRb	SINE/MIR	29	241	(27)	2435440
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
1689	14.0	2.5	0.0	chr22	21571431	21571701	(29246767)	C	AluSq2	SINE/Alu	(35)	278	1	2435448
419	29.7	13.3	6.0	chr22	21588015	21588415	(29230053)	C	L3	LINE/CR1	(1657)	2442	2008	2435475
2331	8.4	0.0	0.3	chr22	21588652	21588959	(29229509)	C	AluSg7	SINE/Alu	(0)	309	3	2435487
1767	15.2	0.0	5.8	chr22	21588960	21589093	(29229375)	C	AluJb	SINE/Alu	(183)	129	1	2435486
2294	10.0	0.0	0.0	chr22	21590188	21590497	(29227971)	C	AluSq2	SINE/Alu	(3)	310	1	2435490
653	33.4	18.7	2.1	chr22	21590498	21590863	(29227605)	C	L3	LINE/CR1	(2799)	1300	888	2435475
731	10.3	0.0	0.0	chr22	21606348	21606444	(29212024)	C	AluSx3	SINE/Alu	(40)	271	175	2435523
1469	18.6	2.3	0.0	chr22	21606573	21606830	(29211638)	+	AluJb	SINE/Alu	1	264	(48)	2435524
629	25.6	16.7	6.7	chr22	21613604	21614021	(29204447)	C	MLT1H	LTR/ERVL-MaLR	(7)	542	75	2435536
2464	8.4	0.0	0.3	chr22	21614873	21615183	(29203285)	+	AluSq2	SINE/Alu	2	311	(2)	2435540
1467	15.5	2.7	4.7	chr22	21615184	21615273	(29203195)	+	L1MB7	LINE/L1	5781	5867	(317)	2435539
346	31.7	9.8	3.2	chr22	21692942	21692980	(29125488)	C	L1MEd	LINE/L1	(5191)	1912	1875	2435691
2277	11.3	1.9	0.0	chr22	21693045	21693345	(29125123)	C	AluSz6	SINE/Alu	(3)	309	3	2435698
2173	12.1	0.0	0.0	chr22	21744461	21744767	(29073701)	+	AluSg	SINE/Alu	2	308	(2)	2435806
2399	3.6	0.0	0.0	chr22	21773241	21773547	(29044921)	C	AluY	SINE/Alu	(0)	311	1	2435852
1081	22.5	9.5	0.0	chr22	21842919	21843203	(28975265)	C	MER46C	DNA/TcMar-Tigger	(23)	315	1	2436026
1988	14.4	0.7	1.0	chr22	21897079	21897383	(28921085)	C	AluJr	SINE/Alu	(8)	304	1	2436170
4715	18.7	7.3	3.2	chr22	21897384	21897892	(28920576)	C	L1MD2	LINE/L1	(2023)	4521	3970	2436165
1874	15.9	0.3	3.0	chr22	21965896	21966197	(28852271)	C	AluJr	SINE/Alu	(15)	297	4	2436280
530	10.4	0.0	3.9	chr22	21966203	21966279	(28852189)	C	AluJr	SINE/Alu	(179)	133	60	2436281
345	29.2	6.1	0.7	chr22	21972203	21972357	(28846111)	+	L1ME4a	LINE/L1	5961	6124	(0)	2436291
337	38.5	8.0	1.5	chr22	21976808	21977005	(28841463)	+	L1M5	LINE/L1	4840	5051	(1095)	2436299
947	19.1	2.2	4.8	chr22	21977030	21977217	(28841251)	+	FAM	SINE/Alu	1	183	(2)	2436300
2289	10.8	0.0	1.3	chr22	22008709	22009014	(28809454)	C	AluSg	SINE/Alu	(7)	303	2	2436367
2166	12.9	0.3	0.0	chr22	22014098	22014391	(28804077)	+	AluSx	SINE/Alu	1	295	(17)	2436381
3878	16.9	1.5	8.2	chr22	22014392	22014532	(28803936)	+	L1MB4	LINE/L1	4785	4922	(1399)	2436371
1147	16.2	13.7	7.3	chr22	22014533	22014804	(28803664)	+	AluJo	SINE/Alu	1	292	(20)	2436382
24095	6.1	0.4	0.4	chr22	22050965	22052098	(28766370)	C	L1PA6	LINE/L1	(4)	6323	5191	2436423
2490	15.5	7.5	1.4	chr22	22075808	22076387	(28742081)	C	MER4B	LTR/ERV1	(0)	900	1	2436443
218	24.7	0.9	0.0	chr22	22084233	22084292	(28734176)	+	L2c	LINE/L2	3337	3419	(7)	2436455
578	17.7	19.7	0.6	chr22	22342570	22342745	(28475723)	+	MLT1B	LTR/ERVL-MaLR	25	242	(148)	2436775
1622	16.4	1.0	3.0	chr22	22418160	22418457	(28400011)	+	AluSx	SINE/Alu	6	297	(15)	2436836
3136	23.0	5.5	1.9	chr22	22418460	22420116	(28398352)	+	L1MB3	LINE/L1	4400	6168	(0)	2436831
243	24.1	2.4	0.0	chr22	22478219	22478301	(28340167)	+	L1ME4b	LINE/L1	612	696	(196)	2436902
1646	21.5	15.0	2.1	chr22	22478537	22479012	(28339456)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2436903
1882	19.6	15.6	1.1	chr22	22538700	22539147	(28279321)	+	MLT1F	LTR/ERVL-MaLR	24	548	(0)	2437043
254	21.9	3.0	1.0	chr22	22581519	22581615	(28236853)	+	MER63D	DNA/hAT-Blackjack	39	137	(924)	2437112
2233	11.5	0.0	0.0	chr22	22581617	22581912	(28236556)	C	AluSg	SINE/Alu	(14)	296	1	2437113
6768	11.6	0.6	1.0	chr22	22649348	22650319	(28168149)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2437224
512	25.7	0.7	5.0	chr22	22760009	22760148	(28058320)	+	AluJo	SINE/Alu	1	134	(178)	2437347
237	27.0	0.0	0.0	chr22	22760159	22760221	(28058247)	C	Cheshire	DNA/hAT-Charlie	(36)	2384	2322	2437348
347	28.9	2.0	0.0	chr22	22760238	22760334	(28058134)	C	MER58B	DNA/hAT-Charlie	(242)	99	1	2437349
6743	11.6	0.8	0.9	chr22	23536062	23537026	(27281442)	+	LTR5_Hs	LTR/ERVK	1	964	(4)	2438461
1183	8.0	3.3	6.9	chr22	24010696	24010884	(26807584)	+	MER30	DNA/hAT-Charlie	47	228	(2)	2439357
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
16	4.5	0.0	0.0	chr22	25405326	25405348	(25413120)	+	(GCG)n	Simple_repeat	1	23	(0)	2442126
21	24.4	5.1	1.2	chr22	27919212	27919290	(22899178)	+	(GCC)n	Simple_repeat	1	83	(0)	2447727
3852	23.0	7.2	5.4	chr22	28544245	28544495	(22273973)	+	L1ME1	LINE/L1	3812	4031	(2115)	2448670
4533	11.2	0.2	0.2	chr22	28544496	28545129	(22273339)	+	MER41B	LTR/ERV1	1	634	(0)	2448674
1306	16.5	7.1	1.2	chr22	28589227	28589658	(22228810)	+	LTR54	LTR/ERV1	1	434	(0)	2448745
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
3581	13.4	3.1	3.0	chr22	29152776	29153407	(21665061)	C	MER41B	LTR/ERV1	(38)	596	1	2449979
1353	20.8	0.0	4.0	chr22	29153408	29153657	(21664811)	C	AluJb	SINE/Alu	(71)	241	2	2449978
31	0.0	0.0	0.0	chr22	29195816	29195842	(21622626)	+	(TG)n	Simple_repeat	1	27	(0)	2450085
1779	13.3	1.1	2.8	chr22	29470710	29470994	(21347474)	C	AluJb	SINE/Alu	(27)	285	6	2450638
14	22.2	5.5	3.9	chr22	29481001	29481080	(21337388)	+	(GCGACGC)n	Simple_repeat	1	81	(0)	2450661
749	28.8	3.3	3.7	chr22	29821384	29821625	(20996843)	+	MIRb	SINE/MIR	27	267	(1)	2451406
433	30.2	5.1	11.6	chr22	30537050	30537103	(20281365)	+	MIR	SINE/MIR	197	250	(12)	2452845
2162	19.6	6.0	5.2	chr22	30537121	30537180	(20281288)	+	MLT1F	LTR/ERVL-MaLR	1	65	(483)	2452847
2327	17.4	4.1	9.8	chr22	30537181	30537333	(20281135)	+	LTR54	LTR/ERV1	1	160	(350)	2452848
1688	13.4	5.4	1.5	chr22	30537334	30537602	(20280866)	+	AluJb	SINE/Alu	2	281	(31)	2452849
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
1211	25.4	11.6	4.2	chr22	32577646	32578122	(18240346)	+	L2a	LINE/L2	2910	3426	(0)	2457258
2093	17.2	19.6	0.5	chr22	32591710	32592153	(18226315)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	2457296
184	29.1	14.0	7.1	chr22	35299491	35299616	(15518852)	+	MIR3	SINE/MIR	5	140	(68)	2462659
864	17.5	1.8	2.9	chr22	35727496	35727666	(15090802)	C	LTR8	LTR/ERV1	(171)	520	352	2463650
350	24.7	2.2	1.1	chr22	35727669	35727758	(15090710)	+	L2a	LINE/L2	3336	3426	(0)	2463651
275	27.7	7.2	4.1	chr22	36426839	36426958	(14391510)	+	MIRc	SINE/MIR	2	127	(141)	2465008
4073	10.0	0.9	2.1	chr22	36426959	36427147	(14391321)	+	MER41A	LTR/ERV1	1	192	(362)	2465009
468	33.5	5.6	1.9	chr22	37079572	37079778	(13738690)	+	MIRb	SINE/MIR	2	216	(52)	2466465
56	1.9	0.0	0.0	chr22	37150087	37150138	(13668330)	+	(CA)n	Simple_repeat	1	52	(0)	2466622
695	29.6	11.1	7.4	chr22	37306605	37307052	(13511416)	C	MLT1K	LTR/ERVL-MaLR	(65)	530	64	2466950
2280	3.7	5.5	0.0	chr22	37844596	37844867	(12973601)	C	AluSc	SINE/Alu	(21)	288	1	2468202
460	25.4	4.0	12.6	chr22	37951566	37951781	(12866687)	+	L2a	LINE/L2	3147	3341	(85)	2468488
50	0.0	0.0	0.0	chr22	38180141	38180183	(12638285)	+	(AC)n	Simple_repeat	1	43	(0)	2468969
339	27.4	2.9	0.0	chr22	38266351	38266452	(12552016)	C	MIRc	SINE/MIR	(76)	192	88	2469135
2422	7.6	0.0	0.3	chr22	38266802	38267102	(12551366)	+	AluY	SINE/Alu	1	300	(11)	2469136
3852	10.8	2.0	14.3	chr22	38514532	38514970	(12303498)	+	MER41B	LTR/ERV1	96	527	(107)	2469658
1527	10.3	0.0	0.0	chr22	38514971	38515165	(12303303)	C	AluSq4	SINE/Alu	(116)	195	1	2469661
205	29.7	4.6	1.0	chr22	38771851	38771950	(12046518)	+	L2b	LINE/L2	3276	3381	(6)	2470242
4440	6.9	0.4	0.4	chr22	38772018	38772568	(12045900)	+	MER41A	LTR/ERV1	1	551	(3)	2470243
14360	11.0	5.1	5.7	chr22	39108063	39108975	(11709493)	+	MER57-int	LTR/ERV1	6568	7534	(3)	2470892
319	31.5	13.4	2.1	chr22	39961741	39962116	(10856352)	C	MamRep434	DNA/TcMar-Tigger	(0)	426	2	2472599
2875	15.6	12.1	0.2	chr22	40814035	40814665	(10003803)	+	LTR62	LTR/ERVL	1	709	(0)	2474419
16	0.0	0.0	0.0	chr22	40856967	40856984	(9961484)	+	(A)n	Simple_repeat	1	18	(0)	2474500
13	17.5	3.0	0.0	chr22	40951788	40951820	(9866648)	+	G-rich	Low_complexity	1	34	(0)	2474736
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
16	6.7	2.9	5.6	chr22	41957929	41957963	(8860505)	+	(CGCC)n	Simple_repeat	1	36	(0)	2477140
184	34.0	4.1	2.1	chr22	43143535	43143630	(7674838)	+	L2a	LINE/L2	3327	3424	(2)	2479694
33	0.0	0.0	0.0	chr22	43862432	43862462	(6956006)	+	(CGCGCC)n	Simple_repeat	1	31	(0)	2480891
200	33.8	6.7	10.5	chr22	43969445	43969864	(6848604)	C	L2b	LINE/L2	(60)	3315	2913	2481122
2534	7.0	0.0	1.3	chr22	46456378	46456692	(4361776)	+	AluY	SINE/Alu	1	311	(0)	2485545
1786	21.0	10.5	1.1	chr22	46652059	46652515	(4165953)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2485850
455	33.8	0.7	0.0	chr22	46754342	46754474	(4063994)	C	MIRc	SINE/MIR	(15)	253	120	2486007
1663	14.7	12.8	1.1	chr22	49657330	49657700	(1160768)	C	MSTA	LTR/ERVL-MaLR	(7)	421	1	2489606
34	36.0	0.0	4.0	chr22	49970634	49970807	(847661)	+	(GT)n	Simple_repeat	1	174	(0)	2490008
2981	14.6	4.5	0.0	chr22	50118435	50118949	(699519)	C	LTR45C	LTR/ERV1	(0)	539	1	2490219
13	20.2	4.3	2.0	chr22	50582505	50582551	(235917)	+	(CTGACCC)n	Simple_repeat	1	49	(0)	2490904
12	24.9	3.2	4.7	chr22	50582811	50582872	(235596)	+	(GCTCC)n	Simple_repeat	1	64	(0)	2490905
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
1585	21.1	7.2	0.8	chr3	4241655	4242032	(194053527)	C	LTR9D	LTR/ERV1	(0)	645	242	2498683
15175	9.0	1.8	0.7	chr3	4242066	4246393	(194049166)	C	L1P2	LINE/L1	(1784)	4362	6	2498684
186	18.9	0.0	5.1	chr3	4824908	4824946	(193470613)	C	X6B_LINE	LINE/CR1	(44)	1028	992	2499638
30	0.0	0.0	0.0	chr3	4831107	4831132	(193464427)	+	(TC)n	Simple_repeat	1	26	(0)	2499647
21	4.0	0.0	0.0	chr3	4831133	4831158	(193464401)	+	(AC)n	Simple_repeat	1	26	(0)	2499648
16	17.1	0.0	0.0	chr3	4831159	4831186	(193464373)	+	(CTCT)n	Simple_repeat	1	54	(0)	2499649
615	30.3	8.4	4.3	chr3	4892284	4892955	(193402604)	+	L1M5	LINE/L1	4381	5082	(1064)	2499740
1958	11.7	3.6	0.0	chr3	4892986	4893251	(193402308)	+	AluSq2	SINE/Alu	1	276	(37)	2499741
2312	7.1	2.1	0.0	chr3	4901609	4901888	(193393671)	+	AluSc5	SINE/Alu	8	293	(16)	2499760
380	25.4	5.1	0.8	chr3	4976236	4976366	(193319193)	+	MER91C	DNA/hAT-Tip100	1	137	(3)	2499889
392	26.2	7.6	4.3	chr3	4976371	4976538	(193319021)	+	MIRb	SINE/MIR	16	191	(17)	2499890
369	26.6	8.3	10.0	chr3	4996004	4996262	(193299297)	C	L2c	LINE/L2	(0)	3387	3134	2499924
1985	18.9	4.0	3.1	chr3	4996294	4996709	(193298850)	+	MLT1C	LTR/ERVL-MaLR	44	463	(4)	2499925
409	31.5	3.0	3.9	chr3	5016683	5016887	(193278672)	C	L2c	LINE/L2	(78)	3309	3107	2499986
707	28.6	0.0	1.2	chr3	5016944	5017116	(193278443)	C	MIR	SINE/MIR	(24)	238	68	2499987
6735	7.8	4.4	1.0	chr3	5081627	5082560	(193212999)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2500157
11	30.1	0.0	3.6	chr3	5187465	5187520	(193108039)	+	G-rich	Low_complexity	1	56	(0)	2500375
14	23.7	4.9	4.7	chr3	5187564	5187644	(193107915)	+	G-rich	Low_complexity	1	85	(0)	2500375
550	29.4	0.0	5.3	chr3	5197247	5197436	(193098123)	C	MER103C	DNA/hAT-Charlie	(45)	252	73	2500392
399	33.5	1.3	0.0	chr3	5428004	5428155	(192867404)	+	LTR16A1	LTR/ERVL	3	156	(300)	2500805
355	38.4	0.0	0.8	chr3	5429394	5429519	(192866040)	+	MIR	SINE/MIR	5	129	(133)	2500806
218	29.4	12.5	2.5	chr3	8353422	8353543	(189942016)	C	MIR	SINE/MIR	(70)	192	57	2505209
702	23.5	3.6	0.0	chr3	8356004	8356165	(189939394)	+	MER58A	DNA/hAT-Charlie	1	168	(56)	2505217
2054	14.6	6.6	3.1	chr3	8356169	8356656	(189938903)	+	MLT2A2	LTR/ERVL	22	554	(0)	2505218
1806	23.1	6.9	8.1	chr3	8356901	8356980	(189938579)	+	MER41E	LTR/ERV1	1	57	(538)	2505220
2241	10.7	0.0	2.6	chr3	8356981	8357288	(189938271)	+	AluSx1	SINE/Alu	1	300	(12)	2505221
2392	8.2	0.0	1.3	chr3	8628853	8629157	(189666402)	C	AluY	SINE/Alu	(9)	302	2	2505701
1213	25.4	6.1	4.9	chr3	8629158	8629219	(189666340)	+	MLT1C	LTR/ERVL-MaLR	410	463	(4)	2505700
435	30.4	4.8	1.8	chr3	8629445	8629639	(189665920)	C	MIR3	SINE/MIR	(6)	202	2	2505702
7208	6.1	0.4	0.0	chr3	9643307	9644375	(188651184)	+	L1PA6	LINE/L1	5080	6151	(3)	2507655
439	15.7	2.8	0.0	chr3	9644392	9644461	(188651098)	C	LTR8	LTR/ERV1	(619)	72	1	2507633
880	16.7	2.7	0.0	chr3	9644468	9644647	(188650912)	+	L1ME1	LINE/L1	5254	5438	(735)	2507656
2402	7.7	0.0	2.6	chr3	9646176	9646486	(188649073)	C	AluY	SINE/Alu	(8)	303	1	2507663
1509	17.0	4.5	9.8	chr3	9646487	9646561	(188648998)	C	LTR54	LTR/ERV1	(184)	326	259	2507660
2144	12.6	0.0	4.0	chr3	9646562	9646886	(188648673)	+	AluSx	SINE/Alu	1	312	(0)	2507664
1509	17.0	4.5	9.8	chr3	9646887	9647133	(188648426)	C	LTR54	LTR/ERV1	(252)	258	19	2507660
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
1134	10.1	0.7	0.0	chr3	11225672	11225848	(187069711)	C	AluSx	SINE/Alu	(0)	312	137	2511048
317	34.1	3.1	5.9	chr3	11225863	11226145	(187069414)	C	L2b	LINE/L2	(153)	3234	2956	2511047
226	33.0	1.5	1.1	chr3	12841955	12842056	(185453503)	C	MIR	SINE/MIR	(52)	216	110	2514226
750	17.3	0.2	1.4	chr3	12842106	12842246	(185453313)	C	FLAM_C	SINE/Alu	(82)	220	9	2514227
3297	9.9	3.5	0.8	chr3	12878674	12879153	(185416406)	C	LTR15	LTR/ERV1	(0)	493	1	2514265
308	21.9	11.0	0.9	chr3	12995200	12995305	(185300254)	+	MIR3	SINE/MIR	5	122	(86)	2514434
458	26.5	5.4	6.4	chr3	13007467	13007623	(185287936)	+	MIRb	SINE/MIR	42	201	(67)	2514465
433	32.7	5.5	1.8	chr3	13081717	13081943	(185213616)	+	MIRb	SINE/MIR	17	252	(16)	2514605
417	31.8	0.0	0.8	chr3	13085122	13085251	(185210308)	C	MIRb	SINE/MIR	(70)	198	70	2514615
256	31.6	12.3	4.2	chr3	13085334	13085475	(185210084)	+	L3	LINE/CR1	3935	4089	(10)	2514614
17	10.6	2.2	6.4	chr3	13932944	13932989	(184362570)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	2516157
13	8.1	3.6	3.5	chr3	14178454	14178481	(184117078)	+	(CCT)n	Simple_repeat	1	29	(0)	2516418
3566	17.5	13.4	0.3	chr3	14250990	14251701	(184043858)	C	LTR8B	LTR/ERV1	(0)	820	1	2516542
1042	24.5	7.6	9.8	chr3	14251702	14251717	(184043842)	+	L1ME2	LINE/L1	5936	5951	(213)	2516538
2643	5.8	0.0	0.0	chr3	14251718	14252026	(184043533)	+	AluY	SINE/Alu	1	309	(2)	2516543
42	26.9	4.3	1.8	chr3	14252469	14252630	(184042929)	+	GA-rich	Low_complexity	1	169	(0)	2516544
3024	5.7	2.3	3.9	chr3	14272354	14272791	(184022768)	C	LTR7	LTR/ERV1	(19)	431	1	2516579
1332	16.9	0.4	4.8	chr3	14272796	14272844	(184022715)	C	AluJb	SINE/Alu	(75)	237	194	2516578
6412	12.1	1.4	1.3	chr3	14272845	14273811	(184021748)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	2516580
353	36.6	0.6	0.6	chr3	14319501	14319662	(183975897)	C	L2c	LINE/L2	(528)	2891	2730	2516674
1724	21.1	5.3	0.0	chr3	14319721	14320095	(183975464)	+	MLT1J2	LTR/ERVL-MaLR	38	433	(15)	2516677
689	22.6	11.0	1.6	chr3	14352195	14352383	(183943176)	+	MLT1H2	LTR/ERVL-MaLR	44	252	(237)	2516753
318	35.7	6.6	0.6	chr3	14404586	14404757	(183890802)	+	MIRc	SINE/MIR	55	237	(31)	2516887
1815	17.0	1.9	1.3	chr3	14407500	14407805	(183887754)	C	AluJb	SINE/Alu	(4)	308	1	2516894
1561	19.5	12.2	9.1	chr3	14407806	14408195	(183887364)	C	L1ME2	LINE/L1	(185)	5979	5575	2516892
12	16.9	5.9	0.0	chr3	14503255	14503288	(183792271)	+	(TGCA)n	Simple_repeat	1	36	(0)	2517071
31	3.3	0.0	0.0	chr3	14598348	14598378	(183697181)	+	(AC)n	Simple_repeat	1	31	(0)	2517277
190	24.7	7.6	0.0	chr3	14598506	14598578	(183696981)	+	L2c	LINE/L2	3015	3093	(294)	2517278
727	28.0	10.9	7.3	chr3	14598650	14599201	(183696358)	+	L2a	LINE/L2	2846	3425	(1)	2517279
2128	20.2	3.6	1.1	chr3	14646624	14647078	(183648481)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2517392
13	19.3	2.2	4.3	chr3	15206100	15206144	(183089415)	+	(GCCCG)n	Simple_repeat	1	46	(0)	2518367
1017	20.6	2.4	0.5	chr3	15287468	15287672	(183007887)	+	MER3	DNA/hAT-Charlie	1	209	(0)	2518492
3106	16.1	2.4	3.1	chr3	15377991	15378535	(182917024)	C	MER66C	LTR/ERV1	(14)	541	1	2518711
2608	20.7	2.6	2.4	chr3	15381211	15381750	(182913809)	C	MER87	LTR/ERV1	(0)	541	1	2518719
486	22.5	15.1	7.1	chr3	15381751	15381771	(182913788)	C	MER58A	DNA/hAT-Charlie	(203)	21	1	2518718
468	25.3	2.5	3.1	chr3	15381773	15381935	(182913624)	C	L1ME4a	LINE/L1	(376)	5748	5587	2518716
12	25.6	0.0	6.9	chr3	19146921	19146978	(179148581)	+	(CCGCC)n	Simple_repeat	1	58	(0)	2524271
191	29.5	10.9	1.6	chr3	20022960	20023083	(178272476)	C	L2a	LINE/L2	(19)	3368	3232	2525506
332	26.0	12.5	2.5	chr3	20023089	20023246	(178272313)	C	MIRb	SINE/MIR	(23)	245	70	2525513
312	26.9	9.7	0.0	chr3	20323561	20323653	(177971906)	C	LTR46	LTR/ERV1	(357)	103	1	2526022
394	34.6	3.1	2.6	chr3	20323680	20323869	(177971690)	C	L2b	LINE/L2	(185)	3190	3000	2526021
12	15.8	0.0	3.3	chr3	21515480	21515509	(176780050)	+	A-rich	Low_complexity	1	30	(0)	2527479
274	13.2	0.0	0.0	chr3	21515521	21515558	(176780001)	+	MER34C_	LTR/ERV1	1	38	(547)	2527480
4644	13.8	7.3	0.0	chr3	21515562	21516308	(176779251)	+	LTR8B	LTR/ERV1	1	806	(14)	2527481
4429	18.5	3.1	0.3	chr3	21531183	21532064	(176763495)	+	L1MC1	LINE/L1	5417	6323	(10)	2527496
20	4.2	0.0	0.0	chr3	21532067	21532091	(176763468)	+	(GA)n	Simple_repeat	1	25	(0)	2527497
665	26.2	11.0	0.0	chr3	21532122	21532331	(176763228)	+	MLT1L	LTR/ERVL-MaLR	321	556	(54)	2527493
12	23.1	2.0	4.0	chr3	23945800	23945848	(174349711)	+	(GCCCG)n	Simple_repeat	1	50	(0)	2531075
15	9.8	0.0	0.0	chr3	23946025	23946046	(174349513)	+	(GC)n	Simple_repeat	1	22	(0)	2531076
2739	20.5	6.7	4.4	chr3	24498361	24499013	(173796546)	C	MER45B	DNA/hAT-Tip100	(371)	669	1	2531972
16	19.2	7.4	0.0	chr3	25790038	25790045	(172505514)	+	(GCGCGT)n	Simple_repeat	1	57	(0)	2533813
16	19.7	0.0	4.4	chr3	25790046	25790090	(172505469)	+	(GCGT)n	Simple_repeat	1	45	(0)	2533814
13	14.9	2.3	6.8	chr3	30606765	30606807	(167688752)	+	(GCGCG)n	Simple_repeat	1	44	(0)	2540793
4491	10.7	1.0	0.3	chr3	30669295	30669902	(167625657)	C	LTR9	LTR/ERV1	(0)	612	1	2540900
1155	31.7	4.6	1.6	chr3	31114055	31114500	(167181059)	+	MLT2E	LTR/ERVL	1	460	(168)	2541575
475	25.6	4.9	1.7	chr3	31124223	31124341	(167171218)	+	MIRb	SINE/MIR	67	189	(79)	2541593
1936	21.6	6.7	3.8	chr3	31124374	31124927	(167170632)	+	MER34A	LTR/ERV1	1	571	(0)	2541594
2397	26.9	3.4	2.4	chr3	31471837	31472835	(166822724)	+	L2a	LINE/L2	2282	3296	(130)	2542152
2295	13.9	3.3	2.8	chr3	31472836	31473197	(166822362)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2542153
2349	10.1	1.7	0.0	chr3	32048311	32048606	(166246953)	C	AluSq2	SINE/Alu	(12)	301	1	2543117
4543	12.1	2.0	0.8	chr3	32048690	32049315	(166246244)	+	MER41B	LTR/ERV1	1	634	(0)	2543118
30808	10.3	2.6	2.0	chr3	32055484	32056738	(166238821)	+	MER41-int	LTR/ERV1	4668	5944	(2)	2543118
3965	12.6	4.7	1.9	chr3	32056739	32057354	(166238205)	+	MER41B	LTR/ERV1	1	634	(0)	2543118
23906	18.7	2.3	2.5	chr3	32067929	32075775	(166219784)	+	HERVH-int	LTR/ERV1	1	7713	(0)	2543152
13	21.9	2.3	2.2	chr3	32685088	32685131	(165610428)	+	G-rich	Low_complexity	1	45	(0)	2544423
2128	13.3	0.0	0.3	chr3	33067881	33068181	(165227378)	C	AluSx1	SINE/Alu	(7)	305	6	2545229
13	25.0	2.7	5.3	chr3	33097152	33097224	(165198335)	+	(CCCGCGC)n	Simple_repeat	1	75	(0)	2545277
272	17.6	4.2	5.6	chr3	33097529	33097600	(165197959)	+	MER5A	DNA/hAT-Charlie	5	75	(114)	2545278
2330	6.8	0.0	0.0	chr3	33097601	33097878	(165197681)	+	AluSq2	SINE/Alu	15	292	(21)	2545279
875	25.7	10.3	6.0	chr3	33791603	33792119	(164503440)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	8	2546468
2231	9.1	0.3	0.3	chr3	33905324	33905609	(164389950)	C	AluSc8	SINE/Alu	(25)	286	1	2546659
1583	22.4	3.0	1.3	chr3	33905611	33905999	(164389560)	C	Charlie4a	DNA/hAT-Charlie	(75)	433	38	2546660
241	33.3	7.3	1.9	chr3	34651368	34651471	(163644088)	C	L1MEg	LINE/L1	(5953)	131	22	2547700
1429	7.1	0.0	0.0	chr3	36922628	36922795	(161372764)	+	AluSc8	SINE/Alu	134	301	(10)	2550644
447	15.9	0.0	0.0	chr3	36922812	36922880	(161372679)	C	MER3	DNA/hAT-Charlie	(81)	128	60	2550642
2433	14.1	6.5	2.8	chr3	36922882	36923256	(161372303)	+	MER83	LTR/ERV1	1	395	(53)	2550645
4356	11.4	1.7	0.5	chr3	37823987	37824612	(160470947)	C	MER41B	LTR/ERV1	(0)	634	1	2552134
312	31.5	5.2	4.2	chr3	37824613	37824737	(160470822)	C	L1MEd	LINE/L1	(2902)	3417	3293	2552133
18	0.0	0.0	0.0	chr3	37987803	37987822	(160307737)	+	(AC)n	Simple_repeat	1	20	(0)	2552369
759	29.1	11.9	3.1	chr3	37987851	37988363	(160307196)	C	L2b	LINE/L2	(10)	3365	2805	2552370
184	7.2	0.0	3.5	chr3	38165413	38165441	(160130118)	+	L2b	LINE/L2	2962	2989	(386)	2552611
3497	17.1	4.7	2.1	chr3	38327461	38328119	(159967440)	C	LTR8B	LTR/ERV1	(7)	813	137	2552860
1219	11.4	1.2	0.0	chr3	38328121	38328287	(159967272)	+	AluYa5	SINE/Alu	136	304	(7)	2552861
906	15.6	0.0	0.0	chr3	38328288	38328422	(159967137)	C	LTR8B	LTR/ERV1	(685)	135	1	2552860
214	28.8	8.8	5.6	chr3	38328440	38328673	(159966886)	+	L2b	LINE/L2	2923	3166	(221)	2552862
12	33.5	1.4	2.7	chr3	39152612	39152685	(159142874)	+	(GTGTGG)n	Simple_repeat	1	75	(0)	2554041
16	22.9	0.0	7.6	chr3	39152889	39152954	(159142605)	+	(TCCC)n	Simple_repeat	1	66	(0)	2554042
14	5.0	0.0	0.0	chr3	39153565	39153585	(159141974)	+	(CGG)n	Simple_repeat	1	21	(0)	2554043
25	15.9	0.0	0.0	chr3	39177702	39177743	(159117816)	+	G-rich	Low_complexity	1	42	(0)	2554098
376	29.6	7.8	0.0	chr3	39284623	39284798	(159010761)	C	MIRb	SINE/MIR	(19)	249	59	2554286
2347	10.8	0.3	0.0	chr3	39322137	39322441	(158973118)	+	AluSx1	SINE/Alu	1	306	(6)	2554334
4322	12.2	2.6	5.1	chr3	39322442	39322505	(158973054)	C	LTR8	LTR/ERV1	(627)	64	1	2554332
772	15.8	0.8	5.0	chr3	39322506	39322558	(158973001)	+	AluJb	SINE/Alu	86	133	(179)	2554331
958	18.9	0.0	3.4	chr3	39322563	39322737	(158972822)	+	AluJb	SINE/Alu	137	305	(7)	2554335
285	22.7	0.0	0.0	chr3	40279001	40279066	(158016493)	+	L2	LINE/L2	2106	2171	(1248)	2555682
1670	29.2	13.1	2.3	chr3	40279073	40279896	(158015663)	C	L2	LINE/L2	(1201)	2218	1293	2555683
345	32.8	3.9	3.0	chr3	40292614	40292814	(158002745)	C	L4_A_Mam	LINE/RTE-X	(275)	4715	4513	2555705
2052	19.6	3.3	7.5	chr3	40299911	40300324	(157995235)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2555722
783	23.9	9.5	1.1	chr3	40300325	40300595	(157994964)	+	L1MEc	LINE/L1	255	550	(5850)	2555720
1879	14.4	3.9	1.1	chr3	40313030	40313306	(157982253)	+	AluSz6	SINE/Alu	3	287	(25)	2555739
863	24.2	6.4	1.9	chr3	40337088	40337356	(157958203)	C	L1ME4a	LINE/L1	(320)	5804	5523	2555777
1379	25.9	6.0	2.9	chr3	40382443	40382956	(157912603)	+	MER70C	LTR/ERVL	1	531	(0)	2555859
17	4.2	0.0	0.0	chr3	40457227	40457251	(157838308)	+	(CGCA)n	Simple_repeat	1	25	(0)	2556019
332	33.3	10.2	1.6	chr3	41026676	41026980	(157268579)	C	L2	LINE/L2	(1325)	2094	1761	2556894
1500	17.1	6.3	0.0	chr3	42902325	42902576	(155392983)	+	LTR75	LTR/ERVL	1	269	(293)	2559856
7434	8.2	0.8	0.2	chr3	43258305	43259266	(155036293)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2560374
16	12.7	0.0	5.3	chr3	43286463	43286500	(155009059)	+	(CGCCC)n	Simple_repeat	1	38	(0)	2560423
521	18.9	5.4	0.9	chr3	43584248	43584354	(154711205)	+	LTR18B	LTR/ERVL	1	112	(502)	2560826
1592	12.0	11.6	0.3	chr3	43584379	43584670	(154710889)	+	LTR18B	LTR/ERVL	286	614	(0)	2560826
812	12.2	0.0	0.0	chr3	43688404	43688526	(154607033)	+	LTR47B3	LTR/ERVL	1	123	(329)	2560991
2206	14.8	5.5	2.0	chr3	43688530	43688561	(154606998)	C	MSTA	LTR/ERVL-MaLR	(6)	422	395	2560992
1079	18.9	7.8	0.0	chr3	43736531	43736731	(154558828)	C	MER58A	DNA/hAT-Charlie	(2)	222	5	2561054
271	30.2	0.0	1.6	chr3	43736833	43736896	(154558663)	C	MER91C	DNA/hAT-Tip100	(77)	63	1	2561055
243	23.5	4.5	3.4	chr3	43771002	43771089	(154524470)	+	MamRep1879	DNA/hAT-Tip100?	38	126	(90)	2561137
27	3.5	0.0	0.0	chr3	43773277	43773306	(154522253)	+	(AGACTCC)n	Simple_repeat	1	30	(0)	2561143
441	21.1	6.3	0.0	chr3	43773781	43773884	(154521675)	+	MER102b	DNA/hAT-Charlie	87	197	(144)	2561144
1448	22.2	9.3	5.0	chr3	44237074	44237551	(154058008)	C	MER39	LTR/ERV1	(25)	682	1	2561774
453	21.9	4.0	0.0	chr3	44237587	44237682	(154057877)	C	LTR33A_	LTR/ERVL	(90)	441	342	2561775
234	10.5	9.5	0.0	chr3	44437872	44437909	(153857650)	C	MER41C	LTR/ERV1	(0)	521	480	2562099
892	8.2	0.0	0.0	chr3	44437901	44438010	(153857549)	C	MER41C	LTR/ERV1	(411)	110	1	2562099
366	11.3	0.0	0.0	chr3	44438012	44438064	(153857495)	C	MER41A	LTR/ERV1	(580)	54	2	2562097
365	18.4	11.2	0.0	chr3	44438073	44438159	(153857400)	C	ERVL-B4-int	LTR/ERVL	(4748)	919	822	2562094
1015	22.0	11.3	4.3	chr3	44439689	44440058	(153855501)	C	LTR52	LTR/ERVL	(14)	407	9	2562105
362	22.3	11.1	1.8	chr3	44440065	44440228	(153855331)	+	LTR50	LTR/ERVL	588	795	(0)	2562104
4308	8.9	3.0	2.7	chr3	44441213	44441528	(153854031)	C	MER41B	LTR/ERV1	(320)	314	1	2562107
288	25.4	6.3	6.9	chr3	44441529	44441540	(153854019)	C	L1ME3G	LINE/L1	(445)	479	468	2562106
208	34.8	2.8	0.0	chr3	44441542	44441610	(153853949)	C	MIRc	SINE/MIR	(129)	139	69	2562109
666	13.9	1.0	1.0	chr3	44518237	44518338	(153777221)	+	MER74C	LTR/ERVL	1	102	(358)	2562240
1978	22.9	4.1	5.3	chr3	44518339	44518887	(153776672)	C	MER92B	LTR/ERV1	(94)	542	1	2562241
5739	5.7	1.0	0.0	chr3	45053730	45054413	(153241146)	C	LTR8	LTR/ERV1	(0)	691	1	2563131
321	2.6	0.0	0.0	chr3	45061246	45061284	(153234275)	+	MER4C	LTR/ERV1	1	39	(426)	2563146
3845	11.1	0.7	2.0	chr3	45061285	45061704	(153233855)	+	MER41A	LTR/ERV1	1	415	(139)	2563147
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
2460	10.5	0.8	0.8	chr3	45076355	45076709	(153218850)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2563186
2018	12.1	3.0	0.3	chr3	45078722	45079010	(153216549)	+	AluSx	SINE/Alu	1	297	(15)	2563187
272	28.7	6.9	3.9	chr3	45106525	45106651	(153188908)	C	L2c	LINE/L2	(4)	3383	3253	2563235
236	30.4	3.8	1.0	chr3	45133937	45134039	(153161520)	+	MamRep1527	LTR	296	401	(568)	2563292
2260	6.4	6.3	0.0	chr3	45134142	45134423	(153161136)	C	AluY	SINE/Alu	(10)	301	1	2563293
281	24.3	3.6	2.7	chr3	45167630	45167739	(153127820)	C	LTR33	LTR/ERVL	(0)	515	405	2563358
14	19.1	0.0	2.6	chr3	45388444	45388481	(152907078)	+	(GCCCC)n	Simple_repeat	1	38	(0)	2563751
713	0.0	0.0	0.0	chr3	45688998	45689071	(152606488)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	2564290
1651	16.9	0.0	0.4	chr3	45859263	45859517	(152436042)	C	AluJo	SINE/Alu	(49)	263	10	2564559
1060	25.1	4.5	4.3	chr3	46022695	46023068	(152272491)	+	L1MEf	LINE/L1	592	966	(5276)	2564796
12	20.6	0.0	6.7	chr3	46023122	46023166	(152272393)	+	G-rich	Low_complexity	1	45	(0)	2564797
1805	15.3	1.0	2.0	chr3	46399984	46400277	(151895282)	C	AluJb	SINE/Alu	(8)	304	14	2565334
284	36.5	15.5	3.5	chr3	46400278	46401109	(151894450)	C	L2	LINE/L2	(2127)	1292	308	2565333
2084	14.1	0.6	0.9	chr3	46416413	46416727	(151878832)	C	MER50	LTR/ERV1	(23)	711	398	2565362
1583	12.6	0.8	1.2	chr3	46416723	46416971	(151878588)	C	MER50	LTR/ERV1	(486)	248	1	2565362
3581	7.5	3.3	0.2	chr3	46433164	46433630	(151861929)	+	LTR3A	LTR/ERVK	3	484	(0)	2565375
834	11.5	0.0	0.0	chr3	46509199	46509311	(151786248)	+	MER83	LTR/ERV1	1	113	(335)	2565504
1667	13.3	8.2	6.7	chr3	46509386	46509731	(151785828)	+	MER83	LTR/ERV1	97	448	(0)	2565504
524	27.8	3.5	2.3	chr3	46947759	46947978	(151347581)	+	MIRb	SINE/MIR	14	241	(27)	2566148
240	30.0	3.9	4.8	chr3	46948067	46948171	(151347388)	C	MIRc	SINE/MIR	(49)	219	116	2566149
2250	9.7	0.0	5.3	chr3	47224565	47224885	(151070674)	+	AluSg	SINE/Alu	1	304	(6)	2566714
1086	25.2	4.1	1.7	chr3	47224886	47225210	(151070349)	C	L2a	LINE/L2	(289)	3137	2801	2566715
663	26.4	21.8	0.0	chr3	47225352	47225624	(151069935)	C	L2a	LINE/L2	(613)	2806	2458	2566715
589	30.0	6.6	9.2	chr3	47225625	47225899	(151069660)	C	L1MEd	LINE/L1	(6707)	379	118	2566717
1775	26.1	15.7	3.5	chr3	47315159	47316335	(150979224)	+	HAL1	LINE/L1	187	1519	(988)	2566906
5309	7.1	2.3	2.0	chr3	47459416	47460527	(150835032)	C	MER11A	LTR/ERVK	(0)	1266	1	2567186
2261	9.7	2.3	0.0	chr3	47480156	47480453	(150815106)	+	AluSp	SINE/Alu	2	306	(7)	2567238
2953	14.7	20.0	4.4	chr3	47480454	47480518	(150815041)	C	LTR8B	LTR/ERV1	(754)	66	3	2567235
1497	17.8	5.2	2.1	chr3	47480529	47480809	(150814750)	C	AluJr	SINE/Alu	(22)	290	1	2567239
246	33.3	1.1	0.0	chr3	47503123	47503209	(150792350)	C	MIRb	SINE/MIR	(92)	176	89	2567301
2402	7.7	0.0	0.3	chr3	47512992	47513291	(150782268)	C	AluSx	SINE/Alu	(13)	299	1	2567324
13	21.1	2.6	0.0	chr3	48089099	48089136	(150206423)	+	(TGCGGCC)n	Simple_repeat	1	39	(0)	2568629
195	14.0	0.0	24.0	chr3	48783545	48783579	(149511980)	+	MIRc	SINE/MIR	100	128	(140)	2569928
2230	12.4	0.0	0.0	chr3	48783580	48783878	(149511681)	C	AluSx	SINE/Alu	(11)	301	3	2569929
17	8.3	7.9	0.0	chr3	49120805	49120842	(149174717)	+	(TCCGGT)n	Simple_repeat	1	41	(0)	2570688
2010	19.1	3.4	14.3	chr3	49238359	49239030	(149056529)	C	LTR4	LTR/ERV1	(0)	596	1	2570877
13	28.0	0.0	0.0	chr3	49940171	49940213	(148355346)	+	(CGGAGG)n	Simple_repeat	1	43	(0)	2572263
15	14.7	0.0	0.0	chr3	50260317	50260346	(148035213)	+	(GGAG)n	Simple_repeat	1	30	(0)	2572837
183	25.5	3.8	0.0	chr3	50569634	50569684	(147725875)	C	MIR1_Amn	SINE/MIR	(64)	166	114	2573214
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
15	23.3	3.5	6.7	chr3	52278686	52278771	(146016788)	+	G-rich	Low_complexity	1	89	(0)	2575687
92	29.9	1.6	4.1	chr3	52410122	52410550	(145885009)	+	G-rich	Low_complexity	1	436	(0)	2575858
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
277	18.9	20.8	2.1	chr3	52771182	52771278	(145524281)	C	L2c	LINE/L2	(1)	3386	3267	2576441
1736	15.7	18.1	1.7	chr3	53354817	53355238	(144940321)	C	LTR54	LTR/ERV1	(3)	507	1	2577507
2560	3.4	0.0	0.7	chr3	57196990	57197284	(141098275)	C	AluYc	SINE/Alu	(6)	293	1	2583509
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
2432	9.9	0.0	0.0	chr3	65565575	65565878	(132729681)	+	AluSz	SINE/Alu	1	304	(8)	2597620
2439	8.2	0.0	0.0	chr3	65565982	65566275	(132729284)	+	AluSx4	SINE/Alu	9	302	(8)	2597621
259	18.3	6.6	7.8	chr3	69014654	69014730	(129280829)	C	MIR	SINE/MIR	(0)	262	187	2603324
4053	6.7	2.9	4.1	chr3	69014765	69015325	(129280234)	+	MER41A	LTR/ERV1	1	554	(0)	2603325
1637	16.1	8.3	8.5	chr3	72004615	72004766	(126290793)	+	MER34C2	LTR/ERV1	3	140	(415)	2608265
5098	7.3	4.5	0.1	chr3	72004767	72005427	(126290132)	+	LTR8	LTR/ERV1	1	691	(0)	2608266
433	24.4	1.1	0.0	chr3	72052819	72052908	(126242651)	+	MER5A1	DNA/hAT-Charlie	25	115	(51)	2608359
709	12.7	8.5	0.0	chr3	72052988	72053105	(126242454)	+	Tigger3b	DNA/TcMar-Tigger	48	176	(1055)	2608360
2155	12.2	6.9	2.3	chr3	72053106	72053450	(126242109)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2608361
867	18.7	3.5	3.5	chr3	72082398	72082569	(126212990)	+	MER5A	DNA/hAT-Charlie	8	179	(10)	2608422
525	30.9	3.0	3.5	chr3	72082775	72082830	(126212729)	C	MIRb	SINE/MIR	(15)	253	199	2608423
186	32.8	14.3	4.1	chr3	72155876	72156083	(126139476)	C	L2b	LINE/L2	(1)	3374	3125	2608588
844	21.7	7.0	1.3	chr3	72319432	72319664	(125975895)	+	MIRb	SINE/MIR	2	240	(28)	2608940
619	23.3	9.1	3.1	chr3	72460695	72460889	(125834670)	C	MLT1L	LTR/ERVL-MaLR	(221)	389	182	2609177
434	27.8	3.4	3.4	chr3	72996453	72996601	(125298958)	C	MIRb	SINE/MIR	(74)	194	46	2610397
21	6.5	0.0	0.0	chr3	72996644	72996675	(125298884)	+	(CTGGGG)n	Simple_repeat	1	32	(0)	2610398
350	16.1	0.0	0.0	chr3	74634853	74634908	(123660651)	C	Alu	SINE/Alu	(4)	297	242	2613044
1842	11.4	8.3	0.0	chr3	74634909	74635163	(123660396)	C	AluSx	SINE/Alu	(32)	280	3	2613045
14	28.6	0.0	0.0	chr3	84247775	84247789	(114047770)	+	A-rich	Low_complexity	1	15	(0)	2625519
2510	4.9	0.3	0.0	chr3	84247790	84248075	(114047484)	+	AluY	SINE/Alu	1	287	(24)	2625520
15	6.9	0.0	8.3	chr3	84248076	84248111	(114047448)	+	(TAATAA)n	Simple_repeat	1	36	(0)	2625521
12	11.1	6.9	0.0	chr3	98584064	98584092	(99711467)	+	A-rich	Low_complexity	1	31	(0)	2639125
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
20	8.4	5.3	0.0	chr3	99876079	99876116	(98419443)	+	(GCCGGG)n	Simple_repeat	1	40	(0)	2640829
18	29.8	0.0	0.0	chr3	99876246	99876302	(98419257)	+	(GCG)n	Simple_repeat	1	57	(0)	2640830
1102	11.4	1.3	1.3	chr3	101631887	101632044	(96663515)	C	AluSx	SINE/Alu	(8)	304	147	2643353
3604	12.4	3.0	1.1	chr3	101632045	101632597	(96662962)	+	LTR6A	LTR/ERV1	1	564	(0)	2643354
52313	17.9	1.7	1.8	chr3	101632600	101641508	(96654051)	+	HERVS71-int	LTR/ERV1	4	8909	(69)	2643354
3707	12.2	3.0	0.2	chr3	101641509	101642056	(96653503)	+	LTR6A	LTR/ERV1	1	564	(0)	2643355
712	20.8	2.6	7.5	chr3	101643829	101643989	(96651570)	+	L1M5	LINE/L1	5608	5760	(483)	2643340
4184	11.3	3.8	0.8	chr3	101643990	101644474	(96651085)	+	MER41B	LTR/ERV1	1	508	(126)	2643360
15	5.6	0.0	0.0	chr3	112610187	112610205	(85685354)	+	(A)n	Simple_repeat	1	19	(0)	2658073
23	27.1	0.0	0.0	chr3	119463509	119463574	(78831985)	+	(GCCAGA)n	Simple_repeat	1	66	(0)	2667614
1004	21.7	3.5	1.3	chr3	123723815	123724038	(74571521)	+	MER58B	DNA/hAT-Charlie	2	230	(111)	2674189
836	14.3	0.0	0.0	chr3	125153631	125153756	(73141803)	C	AluSx	SINE/Alu	(4)	308	183	2676525
584	18.2	0.0	0.0	chr3	125153766	125153864	(73141695)	C	Tigger7	DNA/TcMar-Tigger	(268)	2223	2125	2676526
1399	11.1	0.0	0.0	chr3	125153868	125154047	(73141512)	C	AluSx	SINE/Alu	(132)	180	1	2676525
2203	14.2	1.7	0.0	chr3	125154571	125154923	(73140636)	C	Tigger7	DNA/TcMar-Tigger	(7)	2484	2126	2676529
1339	20.0	4.4	1.4	chr3	125154922	125155210	(73140349)	C	Tigger7	DNA/TcMar-Tigger	(2193)	298	1	2676530
13	20.3	2.4	2.3	chr3	125595688	125595729	(72699830)	+	G-rich	Low_complexity	1	43	(0)	2677363
4033	9.2	0.2	0.0	chr3	127732958	127733510	(70562049)	+	MER41A	LTR/ERV1	1	554	(0)	2680572
2419	8.2	0.0	0.0	chr3	128011914	128012207	(70283352)	+	AluSx	SINE/Alu	1	294	(18)	2681058
5193	15.1	2.0	3.9	chr3	128012208	128012392	(70283167)	+	Tigger3b	DNA/TcMar-Tigger	78	265	(966)	2681057
3990	11.8	0.2	0.0	chr3	128012393	128012945	(70282614)	+	MER41A	LTR/ERV1	1	554	(0)	2681059
16	3.6	6.9	0.0	chr3	128076963	128076991	(70218568)	+	(GTGACG)n	Simple_repeat	1	31	(0)	2681151
382	31.6	7.9	3.1	chr3	128547713	128547963	(69747596)	C	MIRb	SINE/MIR	(1)	261	1	2681906
2264	5.9	0.4	1.1	chr3	128651030	128651338	(69644221)	C	AluYc	SINE/Alu	(0)	299	1	2682134
13	16.6	0.0	0.0	chr3	128726204	128726230	(69569329)	+	(GGC)n	Simple_repeat	1	27	(0)	2682345
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
532	24.5	7.3	4.0	chr3	129599864	129600061	(68695498)	+	MIRc	SINE/MIR	55	262	(0)	2684052
634	25.9	9.2	4.1	chr3	131072103	131072392	(67223167)	C	MLT1L	LTR/ERVL-MaLR	(46)	564	259	2686375
3992	15.4	4.0	2.2	chr3	134496116	134496811	(63798748)	C	LTR62	LTR/ERVL	(0)	709	1	2691560
13094	12.5	3.5	1.3	chr3	134496812	134497369	(63798190)	C	L1MA4A	LINE/L1	(684)	5619	5053	2691559
1839	17.2	0.0	0.3	chr3	135513179	135513504	(62782055)	+	HUERS-P1-int	LTR/ERV1	5939	6263	(0)	2692971
3438	11.4	4.6	2.1	chr3	135513505	135514076	(62781483)	+	LTR8	LTR/ERV1	1	587	(104)	2692971
305	23.9	5.8	4.2	chr3	136330876	136330993	(61964566)	C	L1MC4	LINE/L1	(124)	7918	7799	2694183
1387	22.9	9.9	4.4	chr3	136330969	136331303	(61964256)	C	L1MC4	LINE/L1	(435)	7607	7256	2694183
3999	8.8	3.4	0.4	chr3	138409885	138410421	(59885138)	C	MER41A	LTR/ERV1	(0)	554	1	2697487
461	22.6	4.6	1.6	chr3	138410440	138410565	(59884994)	+	Charlie4z	DNA/hAT-Charlie	1	130	(37)	2697488
290	31.2	0.9	1.8	chr3	138875928	138876041	(59419518)	C	CR1-3_Croc	LINE/CR1	(1636)	1969	1857	2698397
244	14.3	2.3	0.0	chr3	138877452	138877493	(59418066)	+	MLT1K	LTR/ERVL-MaLR	532	574	(21)	2698400
3914	13.3	1.3	7.2	chr3	138891060	138891469	(59404090)	+	L1MB2	LINE/L1	5483	5892	(279)	2698441
740	27.9	3.7	1.2	chr3	139121665	139121904	(59173655)	C	MIRb	SINE/MIR	(22)	246	1	2698845
3986	13.8	4.5	2.8	chr3	141312045	141312735	(56982824)	C	LTR62	LTR/ERVL	(5)	704	1	2702098
1307	24.4	7.8	2.0	chr3	141370088	141370438	(56925121)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	64	2702204
251	12.2	3.9	0.0	chr3	141804761	141804809	(56490750)	C	MER4-int	LTR/ERV1	(5436)	1162	1112	2702885
128	18.9	3.9	3.1	chr3	141804823	141805143	(56490416)	+	(ACACAT)n	Simple_repeat	1	326	(0)	2702886
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
405	25.2	6.1	4.5	chr3	143307868	143307979	(54987580)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2705502
347	29.7	4.1	2.9	chr3	143308156	143308219	(54987340)	+	MIR	SINE/MIR	84	148	(114)	2705503
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
30	24.7	1.2	0.0	chr3	150408250	150408330	(47887229)	+	(CGG)n	Simple_repeat	1	82	(0)	2715186
216	24.9	8.7	4.3	chr3	150727802	150727927	(47567632)	+	L2c	LINE/L2	3228	3360	(15)	2715749
265	31.2	17.0	2.7	chr3	150728135	150728327	(47567232)	C	MIRb	SINE/MIR	(5)	263	33	2715750
13	17.2	3.9	5.7	chr3	150762949	150762999	(47532560)	+	(CGCCCGG)n	Simple_repeat	1	53	(0)	2715807
3118	6.1	8.5	0.7	chr3	153232111	153232523	(45063036)	C	LTR7	LTR/ERV1	(2)	448	1	2719469
570	16.7	0.0	2.9	chr3	153232534	153232638	(45062921)	C	MSTC	LTR/ERVL-MaLR	(326)	102	1	2719470
380	28.6	10.8	5.4	chr3	155027476	155027623	(43267936)	+	L2c	LINE/L2	2977	3136	(251)	2721929
4040	14.2	0.9	0.8	chr3	155076515	155077147	(43218412)	C	MER41B	LTR/ERV1	(0)	634	1	2722010
266	34.1	0.0	5.0	chr3	155077148	155077214	(43218345)	C	L1ME3E	LINE/L1	(6923)	353	288	2722003
3495	8.7	0.4	0.0	chr3	155282777	155283245	(43012314)	C	LTR7C	LTR/ERV1	(0)	471	1	2722264
405	18.9	9.6	2.9	chr3	155283246	155283400	(43012159)	C	HERVH-int	LTR/ERV1	(0)	7713	7564	2722264
256	35.2	9.6	2.2	chr3	155371464	155371695	(42923864)	C	MIRc	SINE/MIR	(1)	267	17	2722395
406	24.3	1.9	1.0	chr3	156455856	156455959	(41839600)	C	MLT1L	LTR/ERVL-MaLR	(327)	283	179	2724066
316	35.3	3.8	1.3	chr3	156456027	156456191	(41839368)	C	MIRc	SINE/MIR	(29)	179	7	2724067
2630	17.9	5.8	0.2	chr3	156604509	156605011	(41690548)	+	LTR53B	LTR/ERVL	1	533	(0)	2724281
378	22.1	4.6	2.8	chr3	156620256	156620362	(41675197)	C	MIR	SINE/MIR	(6)	256	148	2724312
2283	13.9	7.6	0.0	chr3	156620366	156620695	(41674864)	+	LTR18A	LTR/ERVL	1	357	(0)	2724313
13	5.3	0.0	0.0	chr3	156826640	156826659	(41468900)	+	(CCT)n	Simple_repeat	1	20	(0)	2724616
15	13.9	0.0	0.0	chr3	157301359	157301382	(40994177)	+	(T)n	Simple_repeat	1	24	(0)	2725310
1409	30.7	15.8	4.0	chr3	157301389	157302337	(40993222)	+	L2c	LINE/L2	1726	2813	(606)	2725311
317	24.3	6.2	6.8	chr3	168116657	168116819	(30178740)	+	Tigger15a	DNA/TcMar-Tigger	497	658	(57)	2739619
1076	25.7	8.3	10.7	chr3	169760228	169760860	(28534699)	C	MER77B	LTR/ERVL	(46)	654	39	2741774
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
610	30.9	3.5	0.0	chr3	170699057	170699247	(27596312)	C	HAL1	LINE/L1	(1612)	895	698	2743450
1610	23.8	4.5	2.4	chr3	170699248	170699657	(27595902)	C	MLT1D	LTR/ERVL-MaLR	(86)	419	1	2743451
266	29.1	12.0	0.0	chr3	171447542	171447644	(26847915)	+	MIRb	SINE/MIR	30	146	(122)	2744535
528	19.7	0.0	0.0	chr3	171470909	171471016	(26824543)	C	MIR3	SINE/MIR	(25)	183	79	2744581
22	3.9	0.0	0.0	chr3	171471052	171471078	(26824481)	+	(A)n	Simple_repeat	1	27	(0)	2744582
497	28.3	7.9	0.7	chr3	171977237	171977389	(26318170)	+	MER20B	DNA/hAT-Charlie	15	179	(604)	2745386
1974	20.8	12.9	1.9	chr3	171977436	171977916	(26317643)	+	MLT1F	LTR/ERVL-MaLR	3	544	(4)	2745387
3971	13.1	3.3	0.7	chr3	176347374	176347990	(21947569)	C	MER41B	LTR/ERV1	(0)	634	1	2751550
2665	25.9	13.2	4.9	chr3	176347991	176348008	(21947551)	+	L1ME3A	LINE/L1	4055	4063	(2083)	2751549
3560	5.8	0.2	0.0	chr3	176348009	176348454	(21947105)	C	L1PA7	LINE/L1	(2)	6152	5706	2751551
9084	5.3	0.5	10.3	chr3	179031977	179033503	(19262056)	+	SVA_B	Retroposon/SVA	1	1377	(6)	2755523
6317	13.3	1.9	1.3	chr3	183520353	183521348	(14774211)	C	LTR5B	LTR/ERVK	(0)	1002	1	2762823
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
503	24.4	10.4	1.6	chr3	186938697	186938879	(11356680)	C	L1MC5	LINE/L1	(12)	9292	9092	2769275
17	5.0	0.0	0.0	chr3	186938951	186938971	(11356588)	+	(TG)n	Simple_repeat	1	21	(0)	2769276
507	28.6	16.5	1.5	chr3	186997209	186997414	(11298145)	C	MIRc	SINE/MIR	(24)	244	2	2769399
4801	3.1	0.2	0.2	chr3	187010516	187011071	(11284488)	+	LTR6B	LTR/ERV1	1	556	(2)	2769433
16	6.8	6.5	0.0	chr3	187139537	187139578	(11155981)	+	(GGCCCC)n	Simple_repeat	1	44	(0)	2769652
3721	10.7	1.1	0.0	chr3	190026252	190026776	(8268783)	+	MER41A	LTR/ERV1	1	531	(23)	2774454
3629	17.3	11.3	0.6	chr3	193590045	193590775	(4704784)	C	LTR8B	LTR/ERV1	(0)	820	1	2779738
249	31.5	10.6	9.7	chr3	193590776	193591060	(4704499)	C	Charlie8	DNA/hAT-Charlie	(2056)	372	74	2779737
477	35.8	1.1	0.5	chr3	193788551	193788738	(4506821)	C	MIR3	SINE/MIR	(11)	197	9	2779996
361	30.4	4.3	0.0	chr3	193794015	193794126	(4501433)	C	MIR3	SINE/MIR	(49)	159	43	2780009
44360	6.3	0.4	0.3	chr3	193922960	193928350	(4367209)	+	HERVL-int	LTR/ERVL	260	5654	(0)	2780230
3387	22.0	2.6	2.2	chr3	193930000	193930655	(4364904)	C	MER63C	DNA/hAT-Blackjack	(142)	788	124	2780231
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
218	30.3	11.6	0.0	chr3	194255618	194255693	(4039866)	+	MIR3	SINE/MIR	122	207	(1)	2780828
2030	7.7	3.7	0.0	chr3	194583529	194583814	(3711745)	+	AluSx4	SINE/Alu	1	297	(13)	2781439
23	8.0	5.0	0.0	chr3	194583890	194583929	(3711630)	+	(CGG)n	Simple_repeat	1	42	(0)	2781440
1479	17.7	5.5	7.5	chr3	195140875	195141194	(3154365)	+	MLT1A0	LTR/ERVL-MaLR	48	365	(0)	2782419
12	0.0	9.1	0.0	chr3	195141686	195141707	(3153852)	+	(GCCA)n	Simple_repeat	1	24	(0)	2782421
566	28.0	8.1	1.0	chr3	195149356	195149550	(3146009)	+	L1MEi	LINE/L1	104	313	(1899)	2782432
632	23.7	1.3	2.6	chr3	195150171	195150326	(3145233)	C	MIRb	SINE/MIR	(47)	221	68	2782435
265	27.7	5.9	0.9	chr3	195164844	195164956	(3130603)	+	Charlie19a	DNA/hAT-Charlie	268	386	(0)	2782462
17	29.4	1.5	1.4	chr3	195895314	195895381	(2400178)	+	(CAGCGG)n	Simple_repeat	1	69	(0)	2783802
811	16.5	1.6	0.0	chr3	196110423	196110549	(2185010)	C	FLAM_C	SINE/Alu	(12)	131	3	2784245
372	23.2	7.2	6.1	chr3	196110558	196110772	(2184787)	+	LTR16	LTR/ERVL	103	382	(69)	2784246
2377	6.9	0.7	1.0	chr3	196318468	196318773	(1976786)	+	AluSx	SINE/Alu	1	305	(7)	2784747
2233	12.2	0.0	0.0	chr3	196563576	196563871	(1731688)	C	AluSx1	SINE/Alu	(16)	296	1	2785302
14	23.8	0.0	5.5	chr3	196563963	196564017	(1731542)	+	A-rich	Low_complexity	1	55	(0)	2785303
3448	12.3	11.4	1.4	chr3	196842744	196843192	(1452367)	C	MER41B	LTR/ERV1	(124)	510	1	2785874
2252	24.8	3.7	4.0	chr3	196843223	196843275	(1452284)	C	LTR82A	LTR/ERVL	(0)	872	833	2785876
1823	14.7	4.2	0.0	chr3	196843276	196843568	(1451991)	C	AluJb	SINE/Alu	(4)	308	3	2785877
15	15.2	0.0	9.4	chr3	196867773	196867825	(1427734)	+	G-rich	Low_complexity	1	53	(0)	2785946
522	26.0	4.8	2.8	chr3	196978495	196978676	(1316883)	+	MIR	SINE/MIR	17	202	(60)	2786156
265	26.2	0.0	2.4	chr3	196978896	196978977	(1316582)	C	MADE2	DNA/TcMar-Mariner	(0)	80	1	2786157
293	30.3	12.7	5.1	chr3	197031934	197032128	(1263431)	+	LTR88b	LTR/Gypsy?	256	467	(370)	2786249
3951	9.5	1.1	2.8	chr3	197575912	197576475	(719084)	C	MER41A	LTR/ERV1	(0)	554	1	2787147
1363	21.9	5.0	5.8	chr3	197576476	197576533	(719026)	+	MLT2D	LTR/ERVL	321	370	(44)	2787144
54	3.8	0.0	0.0	chr3	197576534	197576588	(718971)	+	(CA)n	Simple_repeat	1	55	(0)	2787148
1363	21.9	5.0	5.8	chr3	197576589	197576637	(718922)	+	MLT2D	LTR/ERVL	371	413	(1)	2787144
1606	25.1	9.6	8.7	chr3	197591652	197592530	(703029)	C	ERV3-16A3_I-int	LTR/ERVL	(3418)	1808	919	2787183
397	21.2	7.4	6.6	chr3	197592670	197592790	(702769)	+	LTR16D	LTR/ERVL	530	651	(0)	2787184
634	25.3	21.2	0.6	chr4	782342	782655	(189431900)	+	L2a	LINE/L2	3017	3412	(14)	2789517
291	28.9	13.3	1.3	chr4	1579509	1579666	(188634889)	+	MIRb	SINE/MIR	20	199	(69)	2790315
244	18.6	0.0	7.8	chr4	1712911	1712974	(188501581)	+	MLT1F2	LTR/ERVL-MaLR	497	555	(5)	2790522
20	10.4	2.2	4.3	chr4	2536140	2536184	(187678371)	+	G-rich	Low_complexity	1	46	(0)	2791756
13	12.7	0.0	0.0	chr4	2934848	2934873	(187279682)	+	(GCCAC)n	Simple_repeat	1	26	(0)	2792456
1884	23.1	4.8	1.4	chr4	3045482	3045999	(187168556)	C	MER72	LTR/ERV1	(174)	548	12	2792668
18	20.3	3.9	0.0	chr4	3074605	3074655	(187139900)	+	(GCCGCC)n	Simple_repeat	1	53	(0)	2792718
676	29.9	17.8	7.0	chr4	4323610	4324104	(185890451)	+	L2	LINE/L2	1768	2296	(1123)	2794498
3317	13.2	7.6	0.2	chr4	4324105	4324641	(185889914)	+	LTR19B	LTR/ERV1	1	580	(0)	2794501
298	22.4	12.1	5.7	chr4	5037801	5037923	(185176632)	+	L2c	LINE/L2	3256	3387	(0)	2795911
277	30.0	15.9	3.7	chr4	6751752	6751938	(183462617)	+	MIRb	SINE/MIR	8	221	(41)	2799014
518	20.7	8.3	0.0	chr4	6752042	6752162	(183462393)	C	MIR	SINE/MIR	(25)	237	106	2799015
17	20.4	8.5	2.2	chr4	6782459	6782540	(183432015)	+	(CCCGCAG)n	Simple_repeat	1	89	(0)	2799089
265	37.0	7.6	0.0	chr4	8242751	8242896	(181971659)	+	MIRc	SINE/MIR	1	158	(110)	2801457
4678	9.9	1.1	2.3	chr4	8243017	8243522	(181971033)	+	MER41B	LTR/ERV1	1	504	(130)	2801458
191	29.5	13.4	3.7	chr4	8252921	8253054	(181961501)	+	MIRb	SINE/MIR	3	151	(117)	2801478
15	21.7	3.5	3.4	chr4	8303671	8303727	(181910828)	+	(TCTG)n	Simple_repeat	1	59	(0)	2801560
31	0.0	0.0	0.0	chr4	8303901	8303929	(181910626)	+	(CATC)n	Simple_repeat	1	29	(0)	2801561
11	18.1	2.4	4.8	chr4	10116990	10117030	(180097525)	+	(CCGGCC)n	Simple_repeat	1	42	(0)	2804234
2891	10.8	6.8	1.1	chr4	10174127	10174596	(180039959)	C	MER9B	LTR/ERVK	(0)	499	1	2804250
993	15.4	10.5	3.2	chr4	10183427	10183647	(180030908)	C	L1PA15	LINE/L1	(489)	5671	5433	2804254
12	7.0	10.0	0.0	chr4	10185838	10185867	(180028688)	+	(AGTGTG)n	Simple_repeat	1	33	(0)	2804256
1596	21.5	9.3	6.7	chr4	10239276	10240022	(179974533)	C	MER4C	LTR/ERV1	(0)	667	34	2804291
2862	7.7	6.0	0.5	chr4	10243620	10244011	(179970544)	C	LTR8	LTR/ERV1	(3)	688	274	2804295
539	9.6	6.7	0.0	chr4	10244011	10244093	(179970462)	C	LTR8	LTR/ERV1	(602)	89	1	2804295
534	25.1	10.5	3.8	chr4	10326011	10326196	(179888359)	C	MER2	DNA/TcMar-Tigger	(66)	279	80	2804331
20	20.4	0.0	0.0	chr4	15002457	15002501	(175212054)	+	(GCG)n	Simple_repeat	1	45	(0)	2811954
12	21.4	4.4	2.1	chr4	16226806	16226850	(173987705)	+	(CGG)n	Simple_repeat	1	47	(0)	2813970
324	27.8	3.8	2.1	chr4	17614255	17614388	(172600167)	C	MIR3	SINE/MIR	(78)	152	20	2816582
29	7.9	0.0	0.0	chr4	18021687	18021727	(172192828)	+	(GCG)n	Simple_repeat	1	41	(0)	2817243
13	23.9	0.0	2.4	chr4	18021876	18021916	(172192639)	+	(CTCCC)n	Simple_repeat	1	41	(0)	2817244
280	31.3	21.5	1.0	chr4	20698850	20699052	(169515503)	C	MIR	SINE/MIR	(5)	257	2	2821306
22	27.2	1.4	2.8	chr4	24584565	24584635	(165629920)	+	(GC)n	Simple_repeat	1	72	(0)	2827351
3213	14.0	8.0	2.9	chr4	26346101	26346680	(163867875)	C	LTR9	LTR/ERV1	(0)	612	1	2830900
4144	12.5	1.6	0.2	chr4	31356454	31357078	(158857477)	C	MER41B	LTR/ERV1	(0)	634	1	2837994
4177	11.7	2.5	0.5	chr4	36757562	36758182	(153456373)	C	MER41B	LTR/ERV1	(0)	634	1	2845180
664	33.0	8.9	2.3	chr4	36758183	36758283	(153456272)	+	L2a	LINE/L2	3175	3287	(139)	2845179
2272	15.8	2.6	0.7	chr4	37001288	37001695	(153212860)	+	L1MB1	LINE/L1	5486	5901	(267)	2845500
2806	9.3	0.5	2.7	chr4	37001706	37002035	(153212520)	+	MER48	LTR/ERV1	10	340	(67)	2845501
923	19.8	7.0	3.4	chr4	37671013	37671247	(152543308)	C	MER21C	LTR/ERVL	(65)	873	630	2846461
4240	13.4	1.3	0.9	chr4	37671250	37671881	(152542674)	+	MER41B	LTR/ERV1	1	634	(0)	2846462
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
256	29.3	10.7	0.0	chr4	38317247	38317379	(151897176)	+	MIRc	SINE/MIR	80	228	(40)	2847575
3999	9.2	1.4	4.4	chr4	38317443	38317888	(151896667)	+	MER41A	LTR/ERV1	1	439	(115)	2847576
89	1.2	0.0	1.1	chr4	38858833	38858919	(151355636)	+	(AAGA)n	Simple_repeat	1	87	(0)	2848518
546	28.1	15.4	1.0	chr4	38858994	38859187	(151355368)	C	MIR	SINE/MIR	(34)	228	2	2848519
2266	9.6	1.6	0.3	chr4	39031604	39031905	(151182650)	+	AluSg7	SINE/Alu	1	306	(3)	2848850
187	31.2	4.9	1.3	chr4	40238028	40238105	(149976450)	C	MIRc	SINE/MIR	(61)	207	127	2851556
12	17.1	2.9	0.0	chr4	40292290	40292304	(149922251)	+	(TTTTC)n	Simple_repeat	5	19	(0)	2851692
584	27.6	10.8	6.1	chr4	40292331	40292795	(149921760)	C	MLT1J	LTR/ERVL-MaLR	(0)	448	20	2851693
196	32.6	10.6	1.5	chr4	44678111	44678306	(145536249)	+	MIRb	SINE/MIR	35	250	(18)	2858627
2652	3.3	0.0	1.3	chr4	46908760	46909059	(143305496)	+	AluY	SINE/Alu	1	296	(15)	2861451
441	35.6	7.2	0.6	chr4	46909122	46909457	(143305098)	C	LTR79	LTR/ERVL	(167)	360	1	2861452
3535	16.2	7.8	1.8	chr4	47325966	47326626	(142887929)	+	MER44D	DNA/TcMar-Tigger	1	704	(1)	2862075
473	32.5	3.2	2.4	chr4	54571525	54571770	(135642785)	+	Plat_L3	LINE/CR1	3019	3266	(320)	2869543
767	28.6	13.9	4.8	chr4	55311956	55312359	(134902196)	+	MLT1K	LTR/ERVL-MaLR	29	486	(109)	2870662
238	29.2	7.3	3.3	chr4	55742565	55742656	(134471899)	+	L2c	LINE/L2	3291	3386	(1)	2871394
2718	13.4	10.4	4.4	chr4	55742770	55743339	(134471216)	+	LTR18B	LTR/ERVL	1	608	(6)	2871395
524	28.2	18.2	3.3	chr4	56181013	56181408	(134033147)	C	L2a	LINE/L2	(20)	3406	2939	2872183
1881	19.1	4.5	3.1	chr4	56181523	56181980	(134032575)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	2872184
821	21.3	0.0	6.5	chr4	56700612	56700797	(133513758)	+	MLT1J	LTR/ERVL-MaLR	109	282	(230)	2873088
4347	13.4	0.0	1.9	chr4	56700861	56701506	(133513049)	+	MER41B	LTR/ERV1	1	634	(0)	2873092
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
2740	13.1	1.5	0.0	chr4	68569548	68569945	(121644610)	+	MER48	LTR/ERV1	4	407	(0)	2888513
917	11.7	0.0	0.0	chr4	68569946	68570073	(121644482)	+	HERVH48-int	LTR/ERV1	1	128	(6526)	2888513
1508	24.6	6.4	6.4	chr4	69178608	69179074	(121035481)	C	MER61E	LTR/ERV1	(38)	531	92	2889146
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
13	19.2	6.1	1.9	chr4	72569320	72569368	(117645187)	+	(GCTGCTG)n	Simple_repeat	1	52	(0)	2893670
256	20.0	0.0	0.0	chr4	74056835	74056887	(116157668)	C	L2a	LINE/L2	(1)	3425	3322	2895660
3992	10.3	0.4	1.1	chr4	74096175	74096724	(116117831)	C	MER41B	LTR/ERV1	(88)	546	1	2895701
381	30.8	8.3	3.4	chr4	74098035	74098222	(116116333)	C	MIR	SINE/MIR	(47)	221	16	2895703
1025	26.7	7.3	3.5	chr4	78599931	78600224	(111614331)	C	MER92A	LTR/ERV1	(97)	315	1	2902383
15	18.3	0.0	2.6	chr4	78615988	78616026	(111598529)	+	(TATAGA)n	Simple_repeat	1	39	(0)	2902411
3608	12.2	0.4	0.2	chr4	78616100	78616626	(111597929)	+	LTR64	LTR/ERV1	1	528	(0)	2902412
219	34.4	4.3	7.1	chr4	78691909	78692077	(111522478)	C	L2c	LINE/L2	(228)	3159	2996	2902571
2420	22.5	11.7	16.7	chr4	78693589	78694457	(111520098)	C	LTR8B	LTR/ERV1	(0)	820	1	2902577
1273	28.5	1.3	0.0	chr4	78694460	78694768	(111519787)	C	HUERS-P1-int	LTR/ERV1	(3)	6260	5948	2902577
743	26.7	1.2	1.8	chr4	78721579	78721746	(111492809)	+	MIRb	SINE/MIR	10	176	(92)	2902621
15	32.9	0.0	0.0	chr4	79211506	79211554	(111003001)	+	(TA)n	Simple_repeat	1	49	(0)	2903329
428	37.4	4.7	0.5	chr4	80143684	80143906	(110070649)	+	ERVL-E-int	LTR/ERVL	552	784	(4883)	2904450
2735	27.4	7.2	4.6	chr4	80423445	80424905	(109789650)	+	FordPrefect	DNA/hAT-Tip100	79	1639	(44)	2904804
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
2208	14.4	4.5	0.0	chr4	83917726	83918066	(106296489)	+	LTR18A	LTR/ERVL	1	357	(0)	2910428
29	19.8	1.9	4.4	chr4	98995507	98995586	(91218969)	+	G-rich	Low_complexity	1	78	(0)	2931108
194	20.4	5.3	0.0	chr4	102868710	102868763	(87345792)	C	MIRc	SINE/MIR	(14)	254	198	2936282
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
13	14.7	0.0	3.1	chr4	103019725	103019756	(87194799)	+	G-rich	Low_complexity	1	32	(0)	2936488
14	18.2	0.0	4.9	chr4	108650471	108650511	(81564044)	+	(TTTA)n	Simple_repeat	1	41	(0)	2943807
13	19.3	0.0	10.2	chr4	109433779	109433789	(80780766)	+	(TCCC)n	Simple_repeat	1	58	(0)	2944950
13	20.3	4.3	2.0	chr4	109433790	109433836	(80780719)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	2944951
36	20.4	1.8	4.5	chr4	109730096	109730205	(80484350)	+	G-rich	Low_complexity	1	112	(0)	2945437
2051	9.7	4.4	1.7	chr4	109731071	109731358	(80483197)	+	AluSx1	SINE/Alu	1	296	(16)	2945439
3946	14.7	3.9	3.6	chr4	110248492	110249142	(79965413)	C	LTR62	LTR/ERVL	(1)	708	48	2946273
2100	12.6	1.0	0.3	chr4	110249143	110249435	(79965120)	C	AluSg4	SINE/Alu	(15)	295	1	2946274
3946	14.7	3.9	3.6	chr4	110249436	110249475	(79965080)	C	LTR62	LTR/ERVL	(662)	47	15	2946273
905	28.0	4.8	1.5	chr4	116342173	116342246	(73872309)	C	L1M5	LINE/L1	(409)	5764	5683	2954321
2145	13.7	10.1	1.3	chr4	116342247	116342698	(73871857)	+	LTR54B	LTR/ERV1	1	496	(2)	2954322
4074	8.4	1.4	0.0	chr4	116382822	116383367	(73831188)	+	MER41A	LTR/ERV1	1	554	(0)	2954375
1130	24.4	9.2	1.6	chr4	116501874	116502193	(73712362)	+	MLT1C	LTR/ERVL-MaLR	1	347	(120)	2954541
4592	12.1	0.8	0.8	chr4	116733418	116734073	(73480482)	+	LTR62	LTR/ERVL	25	680	(29)	2954818
340	11.4	0.0	0.0	chr4	118591591	118591662	(71622893)	C	AluSc	SINE/Alu	(0)	309	236	2957168
2542	13.8	6.2	1.9	chr4	118630009	118630428	(71584127)	+	MER1A	DNA/hAT-Charlie	1	439	(90)	2957267
1875	17.0	2.7	2.7	chr4	119402664	119403067	(70811488)	C	L1MB2	LINE/L1	(9)	6162	5759	2958385
251	27.9	0.0	0.0	chr4	121791055	121791115	(68423440)	C	L2a	LINE/L2	(2)	3424	3364	2961575
773	24.2	12.1	0.9	chr4	121791154	121791366	(68423189)	+	MIR	SINE/MIR	8	247	(15)	2961576
591	25.0	0.8	2.3	chr4	121794552	121794682	(68419873)	+	MIR	SINE/MIR	21	149	(113)	2961585
515	19.6	7.8	1.4	chr4	121794691	121794835	(68419720)	+	L1MC1	LINE/L1	6172	6326	(7)	2961586
464	32.5	9.7	1.9	chr4	122803734	122804000	(67410555)	C	LTR33	LTR/ERVL	(56)	459	170	2963050
370	24.8	0.0	3.5	chr4	122804013	122804125	(67410430)	C	LTR33	LTR/ERVL	(395)	120	12	2963050
19	25.8	7.0	0.0	chr4	122804245	122804315	(67410240)	+	(AT)n	Simple_repeat	1	76	(0)	2963051
4509	14.2	4.4	0.7	chr4	123349123	123349802	(66864753)	C	LTR62	LTR/ERVL	(2)	707	2	2963818
4484	8.9	0.9	4.6	chr4	127629748	127630405	(62584150)	C	MER41B	LTR/ERV1	(0)	634	1	2969334
448	19.2	15.7	0.6	chr4	127630446	127630618	(62583937)	C	Charlie29a	DNA/hAT-Charlie	(6)	713	510	2969335
190	19.0	0.0	2.3	chr4	128517594	128517636	(61696919)	+	MIR3	SINE/MIR	160	201	(7)	2970835
3408	15.9	3.3	7.2	chr4	137967380	137968099	(52246456)	C	LTR8	LTR/ERV1	(0)	691	1	2982317
1652	31.5	5.0	7.4	chr4	137968100	137968367	(52246188)	+	ERV3-16A3_I-int	LTR/ERVL	1814	2071	(3155)	2982315
386	30.9	17.0	3.5	chr4	140126465	140127214	(50087341)	+	L2	LINE/L2	2118	2989	(430)	2985769
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
265	27.3	3.8	0.0	chr4	146407660	146407736	(43806819)	+	MLT1L	LTR/ERVL-MaLR	1	80	(530)	2994290
411	27.6	17.7	3.5	chr4	146407813	146407981	(43806574)	+	Charlie17a	DNA/hAT-Charlie	18	215	(2)	2994291
382	29.7	6.3	8.7	chr4	146408048	146408266	(43806289)	+	MLT1L	LTR/ERVL-MaLR	209	422	(188)	2994290
4052	9.9	3.0	0.3	chr4	150316667	150317245	(39897310)	C	MER41E	LTR/ERV1	(0)	595	1	2999581
4232	10.5	3.8	1.0	chr4	151038612	151039227	(39175328)	+	MER41B	LTR/ERV1	1	634	(0)	3000689
295	26.9	12.3	3.9	chr4	151099121	151099275	(39115280)	C	MIRb	SINE/MIR	(72)	196	27	3000859
13	17.4	4.9	2.3	chr4	151761141	151761181	(38453374)	+	GA-rich	Low_complexity	1	43	(0)	3001943
27	6.1	0.0	0.0	chr4	152535997	152536031	(37678524)	+	(CAGCGG)n	Simple_repeat	1	35	(0)	3003140
14	22.8	0.0	0.0	chr4	152536311	152536346	(37678209)	+	(CGC)n	Simple_repeat	1	36	(0)	3003141
324	33.0	6.1	0.0	chr4	154456115	154456299	(35758256)	C	Tigger15a	DNA/TcMar-Tigger	(312)	403	207	3006065
596	36.1	4.8	5.3	chr4	154456300	154456697	(35757858)	C	L2c	LINE/L2	(3)	3384	2989	3006066
363	34.6	13.8	5.0	chr4	158182306	158182725	(32031830)	+	L1MEg	LINE/L1	200	662	(5422)	3011025
16	0.0	0.0	0.0	chr4	158182728	158182745	(32031810)	+	(A)n	Simple_repeat	1	18	(0)	3011026
13	28.0	0.0	0.0	chr4	159103096	159103138	(31111417)	+	(GCAGGA)n	Simple_repeat	1	43	(0)	3012414
3268	14.9	7.0	2.2	chr4	162727254	162727743	(27486812)	C	LTR9	LTR/ERV1	(100)	512	2	3017093
2328	8.3	0.3	0.3	chr4	163167011	163167299	(27047256)	+	AluSg	SINE/Alu	1	289	(21)	3017677
4364	15.1	3.2	1.8	chr4	163195102	163195866	(27018689)	C	LTR19C	LTR/ERV1	(0)	779	4	3017697
16	16.3	4.9	0.0	chr4	165207420	165207460	(25007095)	+	(GCCC)n	Simple_repeat	1	43	(0)	3020741
25	14.7	0.0	0.0	chr4	165207463	165207507	(25007048)	+	(CAG)n	Simple_repeat	1	45	(0)	3020742
4286	13.7	1.1	1.2	chr4	165476025	165476747	(24737808)	C	MER50	LTR/ERV1	(12)	722	1	3021156
22	22.7	0.0	0.0	chr4	169010176	169010221	(21204334)	+	A-rich	Low_complexity	1	46	(0)	3025634
757	26.7	16.6	6.6	chr4	172998921	172999538	(17215017)	C	LTR41C	LTR/ERVL	(0)	701	10	3030998
3800	15.5	3.4	5.3	chr4	178037447	178038169	(12176386)	+	LTR62	LTR/ERVL	1	709	(0)	3037709
2944	25.6	8.4	2.4	chr4	183348376	183348835	(6865720)	+	Arthur1	DNA/hAT-Tip100	1	507	(3440)	3044782
4144	13.2	2.0	0.0	chr4	183348836	183349456	(6865099)	+	MER41B	LTR/ERV1	1	634	(0)	3044783
4613	10.7	0.0	4.3	chr4	184339405	184339941	(5874614)	C	MER41B	LTR/ERV1	(107)	527	1	3046401
2789	23.4	2.0	7.8	chr4	184339944	184339990	(5874565)	+	L1ME1	LINE/L1	5591	5628	(724)	3046398
2293	8.9	2.9	0.7	chr4	184339991	184340294	(5874261)	C	AluY	SINE/Alu	(0)	311	1	3046403
644	28.4	8.7	6.3	chr4	184838528	184838974	(5375581)	C	L2a	LINE/L2	(10)	3416	2958	3047252
182	21.1	11.9	0.0	chr4	184839142	184839193	(5375362)	C	L2b	LINE/L2	(38)	3349	3291	3047244
300	18.4	16.1	5.2	chr5	208010	208124	(181330135)	+	MIRc	SINE/MIR	3	132	(136)	3055146
421	27.6	3.5	1.2	chr5	566782	566946	(180971313)	+	L1MEg	LINE/L1	1249	1417	(4667)	3055521
13	17.9	3.1	0.0	chr5	892658	892689	(180645570)	+	(GGC)n	Simple_repeat	1	33	(0)	3055778
13	16.6	3.6	7.0	chr5	1105788	1105842	(180432417)	+	(GCCCCCA)n	Simple_repeat	1	57	(0)	3055943
3656	15.6	4.9	2.1	chr5	1131917	1132532	(180405727)	+	MER41B	LTR/ERV1	1	634	(0)	3055963
5037	19.0	3.3	1.2	chr5	1366045	1367545	(180170714)	+	L1MC1	LINE/L1	4802	6332	(1)	3056181
33	2.2	0.0	7.4	chr5	1746627	1746680	(179791579)	+	(ACGTG)n	Simple_repeat	1	54	(0)	3056600
421	15.2	0.0	0.0	chr5	5523237	5523302	(176014957)	+	MER41C	LTR/ERV1	1	66	(455)	3060644
326	9.5	0.0	0.0	chr5	5523299	5523340	(176014919)	+	MER41C	LTR/ERV1	25	66	(455)	3060644
329	7.0	2.3	0.0	chr5	5523335	5523377	(176014882)	+	MER41C	LTR/ERV1	23	66	(455)	3060644
3087	15.2	1.6	0.2	chr5	5585866	5586354	(175951905)	C	MER66C	LTR/ERV1	(59)	496	1	3060714
1041	31.0	2.9	4.4	chr5	5598492	5598950	(175939309)	C	LTR16A1	LTR/ERVL	(4)	452	1	3060730
2354	19.7	6.7	2.6	chr5	6408606	6409005	(175129254)	+	L1MD3	LINE/L1	7317	7729	(266)	3061806
277	30.4	2.3	8.8	chr5	7034665	7034801	(174503458)	+	MIRb	SINE/MIR	42	169	(99)	3062619
3841	6.9	0.2	1.4	chr5	7034920	7035433	(174502826)	C	L1PA8	LINE/L1	(3)	6169	5662	3062620
2387	14.7	4.7	2.7	chr5	8012297	8012709	(173525550)	C	MSTB	LTR/ERVL-MaLR	(0)	426	5	3063850
1500	21.6	1.7	3.3	chr5	8012710	8012967	(173525292)	+	MLT1A0	LTR/ERVL-MaLR	108	363	(2)	3063849
17	25.8	1.9	0.0	chr5	8013022	8013073	(173525186)	+	A-rich	Low_complexity	1	53	(0)	3063851
2051	26.6	8.9	2.1	chr5	10294577	10295021	(171243238)	C	L2a	LINE/L2	(617)	2802	2332	3066630
3171	18.1	5.1	7.2	chr5	10303607	10304078	(171234181)	+	MER72	LTR/ERV1	15	494	(228)	3066651
398	19.3	8.1	1.7	chr5	10304849	10304964	(171233295)	C	LTR37A	LTR/ERV1	(295)	131	8	3066650
354	26.2	1.3	3.1	chr5	10485104	10485246	(171053013)	C	MLT1O	LTR/ERVL-MaLR	(341)	254	111	3066968
2355	24.2	5.5	3.7	chr5	10503793	10504385	(171033874)	C	MER77	LTR/ERVL	(0)	604	1	3067013
273	28.2	10.6	0.8	chr5	10504439	10504699	(171033560)	C	L1M5	LINE/L1	(638)	5485	5213	3067014
187	31.2	9.9	4.4	chr5	10537240	10537420	(171000839)	C	MamRTE1	LINE/RTE-BovB	(252)	3560	3369	3067093
531	24.9	8.4	2.0	chr5	10589189	10589389	(170948870)	+	MER54A	LTR/ERVL	373	587	(314)	3067192
36	0.0	0.0	0.0	chr5	10761386	10761418	(170776841)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	3067423
13	18.9	3.5	6.8	chr5	10761419	10761475	(170776784)	+	GA-rich	Low_complexity	1	59	(0)	3067424
2042	21.0	2.5	5.5	chr5	16417402	16417906	(165120353)	C	MER65B	LTR/ERV1	(42)	489	1	3074970
2350	15.5	3.3	3.5	chr5	16417910	16418338	(165119921)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	7	3074971
2079	17.7	4.7	1.1	chr5	16778385	16778688	(164759571)	+	MER61C	LTR/ERV1	1	294	(134)	3075505
5886	5.8	1.3	1.4	chr5	18800049	18800829	(162737430)	+	LTR17	LTR/ERV1	1	780	(0)	3078522
2632	11.3	8.1	2.0	chr5	18800830	18800955	(162737304)	+	LTR21A	LTR/ERV1	302	455	(26)	3078521
48	4.1	0.0	0.0	chr5	18800956	18801005	(162737254)	+	(TC)n	Simple_repeat	1	50	(0)	3078523
2632	11.3	8.1	2.0	chr5	18801006	18801030	(162737229)	+	LTR21A	LTR/ERV1	456	480	(1)	3078521
4205	13.4	1.1	0.0	chr5	19241281	19241907	(162296352)	C	MER41B	LTR/ERV1	(0)	634	1	3079089
1692	16.3	7.4	0.0	chr5	21479959	21480258	(160058001)	+	MER2	DNA/TcMar-Tigger	22	345	(0)	3082060
320	22.9	12.5	4.5	chr5	21480265	21480374	(160057885)	C	L2a	LINE/L2	(97)	3329	3210	3082061
9732	10.9	5.9	4.5	chr5	21485315	21486863	(160051396)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	2	3082065
992	31.5	5.6	1.9	chr5	22165053	22165477	(159372782)	+	L2a	LINE/L2	2729	3196	(230)	3083048
43	6.0	0.0	0.0	chr5	22165478	22165530	(159372729)	+	(ACACAT)n	Simple_repeat	1	53	(0)	3083052
659	33.6	12.0	6.7	chr5	22165531	22165589	(159372670)	+	L2a	LINE/L2	3197	3233	(193)	3083048
3897	10.0	1.1	1.8	chr5	22165590	22166147	(159372112)	+	MER41A	LTR/ERV1	1	554	(0)	3083053
8282	22.4	6.7	4.6	chr5	29088779	29090578	(152447681)	C	L1MC3	LINE/L1	(0)	8203	6365	3091951
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
402	28.1	12.4	6.7	chr5	32560105	32560457	(148977802)	+	MLT1L	LTR/ERVL-MaLR	158	516	(94)	3097110
1584	12.2	1.3	0.0	chr5	32562034	32562254	(148976005)	C	LTR62	LTR/ERVL	(485)	224	1	3097113
881	11.7	0.7	6.4	chr5	32562255	32562410	(148975849)	C	MER34D	LTR/ERV1	(196)	383	237	3097112
20	4.2	0.0	0.0	chr5	32562411	32562435	(148975824)	+	(AC)n	Simple_repeat	1	25	(0)	3097118
699	19.4	1.5	0.0	chr5	32562439	32562567	(148975692)	C	AluJo	SINE/Alu	(35)	277	147	3097119
1914	8.9	9.1	17.8	chr5	33297739	33298188	(148240071)	C	MER48	LTR/ERV1	(0)	407	1	3098120
4795	12.9	4.2	1.7	chr5	33298189	33298338	(148239921)	+	LTR39	LTR/ERV1	630	783	(0)	3098119
323	29.5	10.9	4.9	chr5	33441308	33441471	(148096788)	C	MIR3	SINE/MIR	(0)	208	34	3098353
321	30.8	9.7	1.5	chr5	34699686	34699766	(146838493)	C	MIR	SINE/MIR	(159)	103	14	3100251
3975	13.1	2.3	2.5	chr5	38660105	38660746	(142877513)	+	LTR9D	LTR/ERV1	5	645	(0)	3106453
1597	23.0	19.0	0.3	chr5	39149384	39150038	(142388221)	+	L2a	LINE/L2	1672	2477	(942)	3107141
2113	18.3	6.0	5.8	chr5	39150068	39150565	(142387694)	+	LTR54	LTR/ERV1	1	499	(11)	3107142
418	27.9	9.6	3.0	chr5	39157930	39158095	(142380164)	+	MamGypLTR3	LTR/Gypsy	742	981	(0)	3107155
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
19	23.3	1.4	5.4	chr5	40798198	40798270	(140739989)	+	G-rich	Low_complexity	1	74	(0)	3109434
12	23.3	0.0	0.0	chr5	40835471	40835505	(140702754)	+	(TTGCTG)n	Simple_repeat	1	35	(0)	3109515
17642	10.2	3.5	1.2	chr5	43072721	43075264	(138462995)	C	HERVH48-int	LTR/ERV1	(4050)	2604	1	3112489
2999	10.3	0.2	0.7	chr5	43075265	43075673	(138462586)	C	MER48	LTR/ERV1	(0)	407	1	3112489
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
209	33.1	18.2	0.0	chr5	43804787	43804907	(137733352)	+	L3b	LINE/CR1	5067	5214	(18)	3113580
4377	11.6	0.9	1.3	chr5	51099310	51099945	(130438314)	+	MER41B	LTR/ERV1	1	634	(0)	3117339
875	28.8	12.1	1.5	chr5	54438129	54438587	(127099672)	+	LTR33	LTR/ERVL	2	515	(0)	3121714
14	17.9	5.1	0.0	chr5	55307834	55307872	(126230387)	+	A-rich	Low_complexity	1	41	(0)	3123044
16	5.2	0.0	0.0	chr5	55390478	55390497	(126147762)	+	(GT)n	Simple_repeat	1	20	(0)	3123159
2003	13.3	0.3	3.0	chr5	56156924	56156996	(125381263)	+	AluSx	SINE/Alu	1	73	(239)	3124583
6479	12.1	0.8	1.1	chr5	56156997	56157967	(125380292)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3124584
1862	14.4	19.8	4.0	chr5	57155003	57155319	(124382940)	C	LTR54	LTR/ERV1	(132)	378	1	3126247
22	20.4	4.2	2.7	chr5	59380380	59380451	(122157808)	+	A-rich	Low_complexity	1	75	(0)	3129428
243	26.3	1.3	7.3	chr5	60821278	60821359	(120716900)	+	L2a	LINE/L2	3348	3424	(2)	3131374
871	11.3	0.8	0.0	chr5	61574404	61574527	(119963732)	+	AluJb	SINE/Alu	1	125	(187)	3132458
986	28.5	11.6	2.7	chr5	62261718	62262005	(119276254)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	277	3133450
2901	3.8	0.0	1.3	chr5	62262006	62262320	(119275939)	+	AluY	SINE/Alu	1	311	(0)	3133451
1612	13.3	7.3	7.8	chr5	62538333	62538715	(118999544)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3133976
719	17.4	1.7	0.0	chr5	62538722	62538836	(118999423)	+	Tigger3c	DNA/TcMar-Tigger	486	602	(0)	3133977
27	18.4	3.9	2.5	chr5	65035559	65035636	(116502623)	+	(GGAGGCG)n	Simple_repeat	1	81	(0)	3137271
1671	28.9	9.4	4.4	chr5	65121743	65121997	(116416262)	+	ERV3-16A3_I-int	LTR/ERVL	2019	2311	(2685)	3137400
439	24.3	12.8	0.7	chr5	65121983	65122119	(116416140)	+	ERV3-16A3_I-int	LTR/ERVL	3228	3383	(2284)	3137400
1708	26.0	4.3	1.4	chr5	65122156	65122650	(116415609)	+	ERV3-16A3_I-int	LTR/ERVL	3320	3829	(1397)	3137400
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
13	30.8	0.0	3.2	chr5	66144565	66144627	(115393632)	+	G-rich	Low_complexity	1	63	(0)	3139020
2998	22.2	0.7	2.6	chr5	66895845	66896525	(114641734)	C	L1MD3	LINE/L1	(18)	7977	7310	3140087
17	6.1	11.8	0.0	chr5	68420968	68421001	(113117258)	+	(CT)n	Simple_repeat	1	38	(0)	3142228
423	28.6	14.0	5.0	chr5	68423084	68423602	(113114657)	C	L2c	LINE/L2	(1004)	2415	1843	3142229
2371	8.8	0.3	0.0	chr5	69090738	69091034	(112447225)	+	AluSp	SINE/Alu	1	298	(15)	3143226
879	7.8	3.4	8.4	chr5	69091035	69091117	(112447142)	C	MER41A	LTR/ERV1	(66)	488	408	3143225
873	6.7	0.0	0.0	chr5	69091121	69091225	(112447034)	C	MER41A	LTR/ERV1	(449)	105	1	3143225
3421	7.8	2.0	0.4	chr5	69091233	69091647	(112446612)	+	LTR46	LTR/ERV1	1	422	(38)	3143227
4537	13.5	10.8	9.3	chr5	70400853	70402000	(111136259)	+	LTR12E	LTR/ERV1	1	1167	(155)	3145688
968	31.7	5.5	2.9	chr5	71398507	71398931	(110139328)	+	L2a	LINE/L2	2729	3196	(230)	3147394
39	2.6	0.0	0.0	chr5	71398932	71398971	(110139288)	+	(ACACAT)n	Simple_repeat	1	40	(0)	3147398
532	33.5	11.5	10.4	chr5	71398972	71399053	(110139206)	+	L2a	LINE/L2	3197	3233	(193)	3147394
4013	9.1	0.5	1.8	chr5	71399054	71399614	(110138645)	+	MER41A	LTR/ERV1	1	554	(0)	3147399
15	12.4	2.6	5.0	chr5	71455695	71455733	(110082526)	+	(GCG)n	Simple_repeat	1	40	(0)	3147474
820	28.0	6.7	6.1	chr5	72014954	72015410	(109522849)	C	MLT1J	LTR/ERVL-MaLR	(52)	460	1	3148378
264	29.2	17.9	11.3	chr5	72015458	72015481	(109522778)	+	L2a	LINE/L2	3147	3175	(200)	3148377
1579	22.4	6.5	5.1	chr5	72015482	72015800	(109522459)	C	MER63B	DNA/hAT-Blackjack	(0)	436	112	3148379
12	20.9	0.0	4.8	chr5	72588120	72588161	(108950098)	+	GA-rich	Low_complexity	1	42	(0)	3149208
293	25.9	1.2	2.3	chr5	72588187	72588302	(108949957)	C	MLT1L	LTR/ERVL-MaLR	(338)	272	98	3149209
2002	15.7	0.0	0.0	chr5	73488444	73488742	(108049517)	+	AluSz	SINE/Alu	1	299	(13)	3150566
1492	22.2	3.3	6.1	chr5	73488743	73489006	(108049253)	C	MLT1A	LTR/ERVL-MaLR	(118)	256	1	3150565
4433	7.1	1.4	2.9	chr5	74591530	74591966	(106946293)	C	MER41A	LTR/ERV1	(109)	445	1	3152193
423	26.2	3.1	1.6	chr5	74592001	74592128	(106946131)	+	Charlie2a	DNA/hAT-Charlie	6	135	(2726)	3152195
285	34.3	0.0	0.0	chr5	77881778	77881882	(103656377)	C	MER127	DNA/TcMar-Tigger	(97)	267	163	3157322
12	18.9	0.0	7.1	chr5	79236030	79236071	(102302188)	+	(CGC)n	Simple_repeat	1	42	(0)	3159397
261	24.7	3.3	8.2	chr5	79697419	79697515	(101840744)	C	MIR3	SINE/MIR	(27)	181	90	3160235
340	29.4	18.8	1.2	chr5	79697526	79697687	(101840572)	C	MIR	SINE/MIR	(43)	219	23	3160236
2995	16.1	9.9	2.7	chr5	80204760	80205346	(101332913)	+	MER61F	LTR/ERV1	1	634	(42)	3161053
465	25.0	1.1	2.7	chr5	80257188	80257317	(101280942)	C	MIR3	SINE/MIR	(100)	168	35	3161179
206	23.8	13.1	3.6	chr5	81301405	81301487	(100236772)	+	L2b	LINE/L2	3239	3330	(45)	3162953
12	8.6	0.0	6.9	chr5	81852164	81852192	(99686067)	+	(AACA)n	Simple_repeat	1	29	(0)	3163718
2978	12.0	1.4	0.6	chr5	85647002	85647706	(95890553)	C	HERVP71A-int	LTR/ERV1	(6768)	822	2	3168765
3268	9.1	1.3	0.2	chr5	85647707	85648160	(95890099)	C	LTR71A	LTR/ERV1	(0)	459	1	3168765
1606	22.2	12.0	2.3	chr5	86527206	86527731	(95010528)	+	L1MC4	LINE/L1	7317	7900	(142)	3169896
859	11.4	1.5	0.0	chr5	87524244	87524374	(94013885)	C	MER50	LTR/ERV1	(24)	710	578	3171215
308	17.6	0.0	4.2	chr5	87524368	87524438	(94013821)	C	MER50	LTR/ERV1	(260)	474	407	3171215
1583	14.7	0.4	0.8	chr5	87524445	87524691	(94013568)	C	MER50	LTR/ERV1	(488)	246	1	3171215
3465	17.3	9.6	6.2	chr5	88250877	88251666	(93286593)	C	LTR8B	LTR/ERV1	(0)	820	1	3172067
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
12	27.1	0.0	2.2	chr5	90529746	90529791	(91008468)	+	G-rich	Low_complexity	1	46	(0)	3174919
2342	7.5	0.0	0.0	chr5	90605158	90605439	(90932820)	+	AluSc	SINE/Alu	24	305	(4)	3175016
4022	11.7	5.4	0.2	chr5	91291596	91292193	(90246066)	C	MER41B	LTR/ERV1	(0)	634	4	3175966
488	30.1	28.9	4.4	chr5	91292194	91292535	(90245724)	C	MamGypLTR2c	LTR/Gypsy	(575)	493	61	3175965
12	31.9	0.0	0.0	chr5	91383758	91383804	(90154455)	+	G-rich	Low_complexity	1	47	(0)	3176171
2415	20.1	8.8	2.5	chr5	94094722	94095349	(87442910)	C	MER77B	LTR/ERVL	(25)	675	5	3179436
4249	4.9	1.6	0.2	chr5	95707337	95707886	(85830373)	C	LTR6B	LTR/ERV1	(0)	558	1	3181553
2278	8.3	0.9	0.0	chr5	95707887	95708199	(85830060)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	3181554
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
87	0.0	0.0	0.0	chr5	96808188	96808261	(84729998)	+	(GT)n	Simple_repeat	1	74	(0)	3183133
18	12.0	0.0	0.0	chr5	96808270	96808296	(84729963)	+	(T)n	Simple_repeat	1	27	(0)	3183134
3909	9.7	1.4	0.0	chr5	96808822	96809367	(84728892)	C	MER41A	LTR/ERV1	(0)	554	1	3183135
3483	10.3	11.4	2.2	chr5	97040896	97041539	(84496720)	+	Tigger3b	DNA/TcMar-Tigger	481	1191	(40)	3183501
945	30.4	4.6	2.8	chr5	98963684	98964113	(82574146)	+	LTR101_Mam	LTR/ERVL	1	438	(391)	3185828
817	17.8	4.5	1.7	chr5	103057143	103057314	(78480945)	C	MER57A-int	LTR/ERV1	(5174)	1013	837	3190904
2326	11.9	0.1	2.6	chr5	103057315	103057717	(78480542)	+	MER41A	LTR/ERV1	1	436	(198)	3190911
1042	25.0	4.2	3.2	chr5	108531424	108532124	(73006135)	+	MER61E	LTR/ERV1	1	728	(0)	3197775
4511	11.0	3.4	0.0	chr5	108548738	108549417	(72988842)	C	LTR62	LTR/ERVL	(5)	704	1	3197803
1491	15.8	9.6	0.0	chr5	108549418	108549671	(72988588)	+	AluJr	SINE/Alu	31	311	(1)	3197804
3147	11.1	2.4	3.5	chr5	109424300	109424550	(72113709)	+	MER84	LTR/ERV1	146	401	(106)	3198972
4798	11.8	0.0	1.7	chr5	109424551	109425251	(72113008)	+	LTR8	LTR/ERV1	1	689	(2)	3198974
227	25.0	5.9	3.0	chr5	109703704	109703802	(71834457)	+	MamRep434	DNA/TcMar-Tigger	295	396	(30)	3199350
2506	19.3	11.6	6.6	chr5	112969366	112969787	(68568472)	+	MER76	LTR/ERVL	270	691	(0)	3203634
387	32.6	1.5	0.0	chr5	113513394	113513522	(68024737)	+	L2a	LINE/L2	3296	3426	(0)	3204398
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
2274	11.5	0.0	0.0	chr5	115375647	115375942	(66162317)	C	AluSx	SINE/Alu	(16)	296	1	3206711
2498	6.2	0.0	0.0	chr5	117404247	117404537	(64133722)	C	AluYc	SINE/Alu	(6)	293	3	3209570
287	26.2	12.2	2.4	chr5	119268331	119268455	(62269804)	C	MIRb	SINE/MIR	(10)	258	120	3212076
367	26.6	1.1	0.0	chr5	119314216	119314309	(62223950)	+	L2a	LINE/L2	3332	3426	(0)	3212151
228	21.9	11.8	7.9	chr5	119314272	119314360	(62223899)	C	L2a	LINE/L2	(39)	3387	3295	3212152
17	28.8	0.0	0.0	chr5	119314419	119314464	(62223795)	+	(AC)n	Simple_repeat	1	46	(0)	3212153
749	28.1	13.3	11.1	chr5	119321225	119322329	(62215930)	+	L2a	LINE/L2	2224	3425	(1)	3212167
507	30.4	6.1	7.5	chr5	120512684	120513233	(61025026)	C	MER41E	LTR/ERV1	(23)	572	117	3213605
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
275	33.7	13.4	1.6	chr5	131996835	131997024	(49541235)	C	L2b	LINE/L2	(162)	3213	2998	3228799
2103	13.5	0.7	0.7	chr5	132177939	132178234	(49360025)	C	AluSz	SINE/Alu	(16)	296	1	3228995
201	26.8	18.8	5.1	chr5	132422670	132422787	(49115472)	C	MIRb	SINE/MIR	(100)	168	31	3229342
249	9.8	2.4	0.0	chr5	132426856	132426896	(49111363)	C	L2b	LINE/L2	(2)	3373	3332	3229350
363	34.2	8.8	1.5	chr5	132527222	132527485	(49010774)	+	LTR85a	LTR/Gypsy?	418	702	(0)	3229496
3418	15.3	2.9	0.7	chr5	132666872	132667416	(48870843)	+	MER41D	LTR/ERV1	1	557	(0)	3229728
985	14.0	0.0	0.0	chr5	132971807	132971949	(48566310)	+	AluSx	SINE/Alu	158	300	(12)	3230254
3811	12.9	1.7	1.1	chr5	132971989	132972560	(48565699)	+	MER41B	LTR/ERV1	1	576	(58)	3230255
1467	20.3	0.4	2.8	chr5	132981249	132981394	(48556865)	+	AluJo	SINE/Alu	134	279	(33)	3230277
911	25.9	1.5	0.5	chr5	132981395	132981588	(48556671)	C	MLT1F	LTR/ERVL-MaLR	(352)	196	1	3230279
1451	19.1	11.3	0.9	chr5	133240834	133241364	(48296895)	+	MER77B	LTR/ERVL	5	690	(10)	3230737
555	33.6	6.0	3.9	chr5	133247986	133248347	(48289912)	C	L3	LINE/CR1	(8)	4091	3722	3230745
477	25.7	4.2	4.8	chr5	133930547	133930756	(47607503)	+	MIR	SINE/MIR	53	255	(13)	3231597
2602	19.6	4.6	0.0	chr5	133932730	133933224	(47605035)	+	LTR53	LTR/ERVL	1	519	(0)	3231602
2677	14.5	15.8	3.9	chr5	134245024	134245561	(47292698)	C	LTR18B	LTR/ERVL	(0)	614	1	3232165
1329	20.8	2.4	6.0	chr5	134245562	134245677	(47292582)	C	L1ME5	LINE/L1	(234)	5960	5846	3232162
1892	13.9	3.9	0.0	chr5	134245678	134245950	(47292309)	+	AluJb	SINE/Alu	1	284	(28)	3232166
2498	7.3	0.3	0.0	chr5	134249369	134249669	(47288590)	C	AluSp	SINE/Alu	(11)	302	1	3232174
278	35.0	5.7	0.5	chr5	135134317	135134500	(46403759)	+	L3	LINE/CR1	3754	3947	(152)	3233930
17	22.6	1.4	5.7	chr5	135399286	135399360	(46138899)	+	(CGGCCC)n	Simple_repeat	1	71	(0)	3234231
13	10.8	6.7	0.0	chr5	136132815	136132844	(45405415)	+	(CCTC)n	Simple_repeat	1	32	(0)	3235278
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
19	24.5	1.3	5.0	chr5	138033058	138033158	(43505101)	+	(GGCGG)n	Simple_repeat	1	97	(0)	3237963
28	27.2	0.0	4.0	chr5	138465508	138465607	(43072652)	+	(GCC)n	Simple_repeat	1	100	(0)	3238916
17	21.3	4.1	0.0	chr5	138543114	138543162	(42995097)	+	(GGC)n	Simple_repeat	1	51	(0)	3239069
209	25.0	3.7	0.0	chr5	139403641	139403692	(42134567)	C	MIR1_Amn	SINE/MIR	(61)	169	116	3240700
20	12.5	0.0	6.1	chr5	139670165	139670217	(41868042)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	3241282
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
309	31.3	7.5	0.0	chr5	141605645	141605743	(39932516)	+	MIR3	SINE/MIR	78	184	(24)	3244266
22	23.6	1.5	1.5	chr5	141682231	141682296	(39855963)	+	(CCCGC)n	Simple_repeat	1	67	(0)	3244398
852	35.1	4.3	0.0	chr5	141691163	141691521	(39846738)	C	ERVL-E-int	LTR/ERVL	(1760)	3907	3533	3244417
390	18.9	15.9	0.0	chr5	141691902	141692012	(39846247)	C	MIRb	SINE/MIR	(52)	216	85	3244419
624	25.6	1.4	6.9	chr5	142091899	142092031	(39446228)	C	LTR54	LTR/ERV1	(89)	421	292	3245231
548	14.6	5.5	8.8	chr5	142092057	142092169	(39446090)	C	LTR54	LTR/ERV1	(327)	183	75	3245231
658	12.3	1.7	0.9	chr5	142092188	142092302	(39445957)	+	L1MB8	LINE/L1	6054	6169	(9)	3245233
2156	22.8	8.0	3.0	chr5	142959275	142959866	(38578393)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	1	3246960
1259	25.8	7.6	6.3	chr5	143026246	143027027	(38511232)	C	L2a	LINE/L2	(64)	3362	2563	3247073
2213	12.5	0.0	0.0	chr5	143209499	143209794	(38328465)	+	AluSx1	SINE/Alu	1	296	(16)	3247312
343	24.7	0.0	2.1	chr5	143219751	143219845	(38318414)	C	MER5B	DNA/hAT-Charlie	(50)	128	36	3247331
2485	16.6	1.4	0.2	chr5	143261943	143262370	(38275889)	C	L1MB7	LINE/L1	(41)	6143	5711	3247416
555	15.5	0.0	1.2	chr5	143262371	143262455	(38275804)	C	MER44C	DNA/TcMar-Tigger	(0)	733	650	3247417
1352	18.0	9.7	0.8	chr5	143262452	143262703	(38275556)	C	MER44C	DNA/TcMar-Tigger	(457)	276	1	3247417
252	29.6	3.4	5.7	chr5	148747530	148747651	(32790608)	C	MER102b	DNA/hAT-Charlie	(222)	119	1	3256352
278	31.2	6.0	1.6	chr5	148747659	148747785	(32790474)	C	L2c	LINE/L2	(73)	3314	3182	3256362
316	14.8	23.5	0.5	chr5	149452541	149452644	(32085615)	+	MIR	SINE/MIR	41	167	(95)	3257768
815	16.6	8.2	1.3	chr5	149452670	149452843	(32085416)	+	MLT1C	LTR/ERVL-MaLR	3	190	(315)	3257769
1329	27.8	10.5	5.0	chr5	149667841	149668496	(31869763)	C	Tigger12c	DNA/TcMar-Tigger	(35)	699	4	3258267
16	12.8	5.7	0.0	chr5	149732036	149732045	(31806214)	+	(GC)n	Simple_repeat	1	10	(0)	3258412
38	0.0	0.0	0.0	chr5	149732046	149732078	(31806181)	+	(GT)n	Simple_repeat	1	33	(0)	3258413
16	12.8	5.7	0.0	chr5	149732079	149732102	(31806157)	+	(GC)n	Simple_repeat	1	26	(0)	3258414
704	12.1	0.0	0.0	chr5	149940033	149940131	(31598128)	C	HY3	scRNA	(2)	99	1	3258883
452	26.2	3.8	0.0	chr5	149940133	149940258	(31598001)	+	MIR	SINE/MIR	63	193	(69)	3258881
1996	12.4	0.4	0.0	chr5	150050508	150050780	(31487479)	C	AluSz6	SINE/Alu	(38)	274	1	3259110
559	27.4	14.7	3.0	chr5	150328893	150329398	(31208861)	+	L2a	LINE/L2	2830	3424	(2)	3259707
28	0.0	3.3	0.0	chr5	150409764	150409793	(31128466)	+	(TGTT)n	Simple_repeat	1	31	(0)	3259866
476	10.6	7.6	0.0	chr5	150409794	150409846	(31128413)	+	MLT1A1	LTR/ERVL-MaLR	343	395	(1)	3259862
16	0.0	0.0	0.0	chr5	150410680	150410697	(31127562)	+	(A)n	Simple_repeat	1	18	(0)	3259868
1120	27.4	12.3	0.9	chr5	150762652	150763205	(30775054)	C	L2a	LINE/L2	(204)	3222	2606	3260642
183	35.4	5.9	3.0	chr5	150763299	150763397	(30774862)	+	MamTip2	DNA/hAT-Tip100	119	220	(85)	3260643
2275	23.4	9.9	6.6	chr5	150773718	150774375	(30763884)	C	LTR37-int	LTR/ERV1	(400)	3660	2940	3260662
194	7.5	13.0	2.4	chr5	150774376	150774416	(30763843)	+	L3	LINE/CR1	1701	1746	(2353)	3260669
2275	23.4	9.9	6.6	chr5	150774417	150774590	(30763669)	C	LTR37-int	LTR/ERV1	(400)	2939	2748	3260662
248	25.2	20.1	5.9	chr5	150780136	150780270	(30757989)	+	MIR1_Amn	SINE/MIR	3	161	(47)	3260683
10097	7.2	3.0	7.6	chr5	150845282	150846933	(30691326)	+	LTR12C	LTR/ERV1	2	1574	(5)	3260779
327	26.5	13.9	2.4	chr5	151022821	151023000	(30515259)	C	MIR3	SINE/MIR	(0)	208	6	3261000
244	32.9	6.8	0.7	chr5	151081330	151081482	(30456777)	C	MIR3	SINE/MIR	(16)	192	30	3261109
407	29.0	17.2	0.5	chr5	151081600	151081793	(30456466)	C	MIRb	SINE/MIR	(21)	247	15	3261110
296	27.4	4.4	8.6	chr5	151213952	151214118	(30324141)	C	MIR3	SINE/MIR	(22)	186	28	3261410
3010	21.7	2.2	0.8	chr5	151709033	151709668	(29828591)	+	LTR9D	LTR/ERV1	1	645	(0)	3262458
197	28.6	9.5	3.7	chr5	154653888	154653996	(26884263)	C	MIR3	SINE/MIR	(77)	131	16	3267691
693	11.2	0.0	0.0	chr5	157278760	157278857	(24259402)	+	MER57A-int	LTR/ERV1	5798	5895	(292)	3272425
974	16.5	9.2	1.2	chr5	157278864	157279121	(24259138)	+	LTR54B	LTR/ERV1	216	496	(2)	3272426
13	21.7	7.5	0.0	chr5	157859249	157859301	(23678958)	+	(TGAGA)n	Simple_repeat	1	57	(0)	3273467
258	30.2	1.6	1.6	chr5	158808026	158808153	(22730106)	+	UCON78	DNA	126	253	(190)	3275145
2817	17.9	9.8	3.3	chr5	159337332	159338006	(22200253)	+	LTR8A	LTR/ERV1	2	725	(2)	3275931
272	34.6	4.2	5.4	chr5	159341792	159341959	(22196300)	C	MIR1_Amn	SINE/MIR	(0)	230	65	3275939
396	32.7	23.1	1.0	chr5	159342137	159342448	(22195811)	C	L2b	LINE/L2	(19)	3356	2955	3275940
3823	13.4	0.2	0.0	chr5	159416866	159417418	(22120841)	C	MER41A	LTR/ERV1	(0)	554	1	3276060
561	29.0	3.4	7.8	chr5	159417437	159417717	(22120542)	C	PABL_B	LTR/ERV1	(399)	268	1	3276061
277	30.1	1.6	0.0	chr5	159539786	159539895	(21998364)	C	L2b	LINE/L2	(3)	3423	3261	3276305
14	9.6	0.0	0.0	chr5	159773408	159773430	(21764829)	+	(GCG)n	Simple_repeat	1	23	(0)	3276694
2155	10.5	0.7	2.9	chr5	159937435	159937747	(21600512)	C	AluSx3	SINE/Alu	(5)	306	1	3277014
727	20.2	6.2	5.6	chr5	168580808	168580929	(12957330)	+	AluJr	SINE/Alu	120	242	(70)	3290346
4961	10.3	0.3	0.3	chr5	168580930	168581563	(12956696)	+	MER41B	LTR/ERV1	1	634	(0)	3290347
344	34.0	7.5	0.0	chr5	168769816	168769962	(12768297)	+	MIR3	SINE/MIR	39	197	(11)	3290725
393	31.2	6.6	2.8	chr5	170307829	170307973	(11230286)	+	MamRep137	DNA/TcMar-Tigger	9	159	(351)	3293362
19	18.9	0.0	0.0	chr5	172006555	172006596	(9531663)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	3296455
429	25.5	6.0	3.7	chr5	172150511	172150554	(9387705)	C	MIR3	SINE/MIR	(155)	53	5	3296799
558	24.6	0.1	4.0	chr5	172441204	172441353	(9096906)	C	MIRb	SINE/MIR	(115)	153	2	3297444
189	31.4	1.9	11.3	chr5	172443558	172443672	(9094587)	+	L2c	LINE/L2	3283	3386	(1)	3297450
12	22.4	0.0	2.6	chr5	172771386	172771423	(8766836)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	3298156
898	27.3	8.4	3.1	chr5	173671478	173672022	(7866237)	C	L2a	LINE/L2	(85)	3290	2717	3300024
250	36.4	3.2	0.0	chr5	173766546	173766666	(7771593)	C	Plat_L3	LINE/CR1	(1183)	2403	2279	3300241
383	33.2	10.3	0.8	chr5	173778204	173778399	(7759860)	+	MIRc	SINE/MIR	21	232	(36)	3300270
540	16.8	25.9	0.0	chr5	173782666	173782808	(7755451)	C	MER53	DNA/hAT	(0)	193	1	3300279
356	25.7	13.4	4.9	chr5	173782809	173782870	(7755389)	+	MIRc	SINE/MIR	186	246	(22)	3300278
2333	9.9	0.3	0.0	chr5	175543829	175544130	(5994129)	+	AluSx1	SINE/Alu	1	303	(9)	3303599
4002	15.6	4.2	2.2	chr5	175544213	175544906	(5993353)	+	LTR62	LTR/ERVL	1	709	(0)	3303600
357	29.6	4.2	6.5	chr5	176185207	176185423	(5352836)	C	HSATI	Satellite	(322)	255	44	3304791
394	30.7	12.0	2.8	chr5	176538222	176538432	(4999827)	C	MIRb	SINE/MIR	(30)	238	6	3305484
316	31.3	10.2	0.0	chr5	176541251	176541365	(4996894)	C	MIR	SINE/MIR	(79)	183	56	3305491
12	19.6	0.0	0.0	chr5	177426628	177426656	(4111603)	+	G-rich	Low_complexity	1	29	(0)	3307400
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
2546	30.1	21.8	1.1	chr5	177556903	177557737	(3980522)	+	ERVL-E-int	LTR/ERVL	2941	3946	(1721)	3307614
194	27.6	2.2	8.4	chr5	178312810	178312904	(3225355)	C	MIR	SINE/MIR	(71)	191	103	3308963
1658	23.3	3.0	2.4	chr5	178312918	178313383	(3224876)	+	L1MB3	LINE/L1	5715	6183	(0)	3308964
467	15.7	0.0	1.2	chr5	178449142	178449225	(3089034)	+	MLT1A1	LTR/ERVL-MaLR	324	406	(2)	3309190
1040	17.7	17.9	2.9	chr5	178555013	178555331	(2982928)	C	MLT1B	LTR/ERVL-MaLR	(22)	368	1	3309392
474	27.9	14.6	6.5	chr5	178555349	178555593	(2982666)	+	MLT1K	LTR/ERVL-MaLR	271	538	(57)	3309390
4025	22.8	4.8	5.6	chr5	179088190	179089573	(2448686)	C	L1MCb	LINE/L1	(5322)	1806	19	3310350
499	32.3	5.2	2.7	chr5	179089619	179089841	(2448418)	C	L1MEh	LINE/L1	(1803)	432	204	3310351
13	18.9	0.0	0.0	chr5	179089855	179089884	(2448375)	+	A-rich	Low_complexity	1	30	(0)	3310352
639	29.0	1.8	2.4	chr5	179302699	179302968	(2235291)	C	L2b	LINE/L2	(198)	3189	2923	3310620
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
3107	16.5	15.8	1.1	chr5	180105888	180106163	(1432096)	C	MER44C	DNA/TcMar-Tigger	(405)	328	1	3312089
13307	16.7	4.1	1.7	chr5	180106164	180107412	(1430847)	C	L1MDa	LINE/L1	(2859)	3678	2389	3312085
20	31.7	0.0	3.3	chr5	180494108	180494198	(1044061)	+	GA-rich	Low_complexity	1	91	(0)	3312778
671	1.3	0.0	0.0	chr5	181207755	181207830	(330429)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	3313853
2126	8.0	1.1	1.7	chr5	181215995	181216282	(321977)	C	AluSq2	SINE/Alu	(27)	286	1	3313878
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
908	27.1	15.5	3.8	chr6	1788860	1789472	(169016507)	C	MER21C	LTR/ERVL	(126)	812	125	3316576
2295	10.6	0.0	0.0	chr6	2720881	2721173	(168084806)	+	AluSg	SINE/Alu	1	293	(17)	3317828
1323	24.1	6.2	4.4	chr6	2721174	2721311	(168084668)	+	HAL1	LINE/L1	1266	1416	(1091)	3317826
890	19.4	2.8	0.0	chr6	2853735	2853909	(167952070)	C	L1MC3	LINE/L1	(391)	7394	7215	3318009
334	11.6	4.2	2.8	chr6	2853920	2853990	(167951989)	C	L1MC3	LINE/L1	(1310)	6475	6404	3318009
254	26.1	0.0	15.4	chr6	2858859	2858962	(167947017)	C	L2c	LINE/L2	(11)	3376	3289	3318013
2119	12.0	1.6	1.0	chr6	2902509	2902817	(167903162)	C	AluSz	SINE/Alu	(1)	311	1	3318086
12	10.3	6.1	2.9	chr6	2903423	2903455	(167902524)	+	(GGTCAG)n	Simple_repeat	1	35	(0)	3318087
238	32.0	3.1	6.7	chr6	2973591	2973724	(167832255)	+	L3b	LINE/CR1	2540	2668	(1431)	3318184
430	25.5	2.0	6.5	chr6	2973829	2973983	(167831996)	C	MER20	DNA/hAT-Charlie	(0)	219	72	3318185
527	30.0	8.1	9.4	chr6	2973997	2974588	(167831391)	C	L1M5	LINE/L1	(902)	5244	4659	3318186
2317	12.3	2.1	7.1	chr6	2979556	2979829	(167826150)	+	MER4D1	LTR/ERV1	635	898	(2)	3318193
4258	12.6	0.2	5.1	chr6	2979919	2980585	(167825394)	+	MER41B	LTR/ERV1	1	634	(0)	3318195
314	34.1	0.0	7.9	chr6	2990481	2990620	(167815359)	+	L2b	LINE/L2	3244	3372	(3)	3318213
3903	10.6	2.7	0.5	chr6	2990658	2991209	(167814770)	+	LTR6A	LTR/ERV1	1	564	(0)	3318214
474	27.1	4.3	0.6	chr6	3026907	3027062	(167778917)	C	MIRb	SINE/MIR	(89)	179	18	3318284
353	32.4	2.8	0.7	chr6	3027225	3027364	(167778615)	+	L1MEd	LINE/L1	20	162	(6941)	3318285
14	4.5	4.3	0.0	chr6	3027381	3027403	(167778576)	+	(CAC)n	Simple_repeat	1	24	(0)	3318286
697	18.5	0.7	0.7	chr6	3209274	3209409	(167596570)	+	MER5A1	DNA/hAT-Charlie	27	162	(4)	3318577
2427	16.1	4.6	10.0	chr6	3337812	3338330	(167467649)	+	MER34A	LTR/ERV1	1	495	(76)	3318755
2052	9.7	6.1	0.0	chr6	3338331	3338609	(167467370)	C	AluSg	SINE/Alu	(13)	297	1	3318756
4477	7.6	0.0	0.0	chr6	3339426	3339979	(167466000)	+	MER41A	LTR/ERV1	1	554	(0)	3318757
12	5.6	0.0	0.0	chr6	4021388	4021406	(166784573)	+	(GCC)n	Simple_repeat	1	19	(0)	3319829
355	32.9	1.8	5.1	chr6	4371432	4371607	(166434372)	C	MIR1_Amn	SINE/MIR	(42)	188	19	3320339
277	21.1	0.0	0.0	chr6	4777353	4777404	(166028575)	C	Eulor9C	DNA	(62)	208	157	3321056
460	33.6	6.3	3.9	chr6	4911231	4911540	(165894439)	C	L4_A_Mam	LINE/RTE-X	(128)	4862	4545	3321207
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
334	31.7	1.9	0.0	chr6	5030818	5030921	(165775058)	+	MER3	DNA/hAT-Charlie	1	106	(103)	3321390
4346	12.1	0.0	2.2	chr6	5541644	5542291	(165263688)	C	MER41B	LTR/ERV1	(0)	634	1	3322203
1262	21.1	8.1	5.0	chr6	5542292	5542471	(165263508)	C	L1ME1	LINE/L1	(379)	6595	6392	3322202
367	25.6	9.5	4.3	chr6	6657265	6657305	(164148674)	C	MLT1K	LTR/ERVL-MaLR	(339)	256	219	3323712
2346	14.3	2.1	21.0	chr6	6657306	6657909	(164148070)	+	LTR45B	LTR/ERV1	3	489	(0)	3323713
367	25.6	9.5	4.3	chr6	6657910	6658006	(164147973)	C	MLT1K	LTR/ERVL-MaLR	(377)	218	110	3323712
496	28.1	9.9	0.0	chr6	6678310	6678455	(164127524)	+	MIRb	SINE/MIR	99	260	(8)	3323745
23	24.1	1.6	0.0	chr6	6678541	6678601	(164127378)	+	(CACA)n	Simple_repeat	1	62	(0)	3323746
4375	20.8	9.9	0.8	chr6	6684371	6685349	(164120630)	+	Tigger6a	DNA/TcMar-Tigger	1	1078	(5)	3323755
22	10.1	0.0	0.0	chr6	6750491	6750522	(164055457)	+	(TA)n	Simple_repeat	1	32	(0)	3323844
13	27.1	0.0	3.8	chr6	7146363	7146415	(163659564)	+	G-rich	Low_complexity	1	53	(0)	3324680
486	30.5	13.1	4.5	chr6	7914737	7915502	(162890477)	+	L2a	LINE/L2	2567	3425	(1)	3325893
17	15.6	0.0	2.6	chr6	10404466	10404503	(160401476)	+	G-rich	Low_complexity	1	38	(0)	3329445
1509	16.7	0.0	1.6	chr6	10517303	10517569	(160288410)	C	AluJb	SINE/Alu	(0)	312	42	3329654
2411	6.5	0.3	0.3	chr6	10517570	10517861	(160288118)	C	AluY	SINE/Alu	(18)	293	2	3329655
393	32.2	6.6	3.4	chr6	10662183	10662301	(160143678)	+	L2	LINE/L2	2497	2622	(797)	3329952
3572	13.7	4.6	4.4	chr6	10662302	10662484	(160143495)	+	MER41B	LTR/ERV1	1	175	(459)	3329953
1969	14.0	0.7	1.3	chr6	10662485	10662784	(160143195)	+	AluSz	SINE/Alu	1	298	(14)	3329954
17	0.0	0.0	0.0	chr6	10694904	10694922	(160111057)	+	(T)n	Simple_repeat	1	19	(0)	3330013
4789	3.4	0.0	0.5	chr6	10750283	10750843	(160055136)	C	LTR6B	LTR/ERV1	(0)	558	1	3330115
20	0.0	0.0	0.0	chr6	13006661	13006682	(157799297)	+	(AC)n	Simple_repeat	1	22	(0)	3333559
463	30.1	4.9	2.3	chr6	13006695	13006871	(157799108)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	228	3333560
355	20.3	1.4	0.0	chr6	13006929	13006997	(157798982)	C	MLT1I	LTR/ERVL-MaLR	(337)	74	5	3333560
225	22.4	4.3	0.0	chr6	13303295	13303361	(157502618)	+	MER21A	LTR/ERVL	124	193	(738)	3334020
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
1900	18.1	0.3	0.3	chr6	13677836	13678134	(157127845)	+	AluJb	SINE/Alu	1	299	(13)	3334670
197	31.8	8.0	0.8	chr6	13702723	13702849	(157103130)	+	L2c	LINE/L2	1803	1939	(1480)	3334721
241	20.6	2.9	0.0	chr6	13702853	13702920	(157103059)	+	L2-3_Crp	LINE/L2	743	812	(1284)	3334722
798	23.3	0.7	0.7	chr6	13703028	13703173	(157102806)	C	AluJb	SINE/Alu	(27)	285	140	3334723
17	18.2	1.8	5.4	chr6	13814560	13814614	(156991365)	+	G-rich	Low_complexity	1	56	(0)	3334957
3600	23.3	5.0	13.2	chr6	14076892	14077331	(156728648)	+	L1MC5a	LINE/L1	1577	2004	(773)	3335416
4427	10.5	1.1	0.8	chr6	14077332	14077963	(156728016)	+	MER41B	LTR/ERV1	1	634	(0)	3335419
30	6.1	0.0	0.0	chr6	14641561	14641595	(156164384)	+	(TG)n	Simple_repeat	1	35	(0)	3336316
758	23.0	39.6	4.4	chr6	14711369	14711695	(156094284)	C	L2a	LINE/L2	(545)	2874	2408	3336430
2089	12.1	1.1	0.0	chr6	14711696	14711975	(156094004)	+	AluSx1	SINE/Alu	20	302	(10)	3336432
238	31.9	6.1	5.5	chr6	14724846	14724991	(156080988)	+	MIRc	SINE/MIR	9	155	(113)	3336456
2577	11.1	5.2	0.0	chr6	14975420	14975799	(155830180)	+	MER57B1	LTR/ERV1	1	401	(0)	3336911
4371	10.3	2.4	3.4	chr6	15019436	15019520	(155786459)	+	MER41B	LTR/ERV1	1	100	(534)	3337019
2241	7.9	1.8	0.0	chr6	15019521	15019797	(155786182)	C	AluSq2	SINE/Alu	(2)	311	30	3337020
583	29.1	5.9	0.9	chr6	15062681	15062905	(155743074)	+	MER46C	DNA/TcMar-Tigger	3	239	(99)	3337129
17	12.7	0.0	0.0	chr6	15107037	15107062	(155698917)	+	(TC)n	Simple_repeat	1	26	(0)	3337250
19	21.4	6.9	1.3	chr6	15248822	15248893	(155557086)	+	(GGC)n	Simple_repeat	1	77	(0)	3337662
2500	7.3	0.0	0.0	chr6	15263592	15263891	(155542088)	C	AluSx1	SINE/Alu	(11)	301	2	3337688
996	17.5	0.0	0.6	chr6	15263898	15264063	(155541916)	C	AluJb	SINE/Alu	(17)	295	131	3337689
232	34.0	15.9	0.4	chr6	15551542	15551786	(155254193)	+	L2c	LINE/L2	3089	3378	(9)	3338060
13	22.1	4.1	2.0	chr6	15551951	15551999	(155253980)	+	A-rich	Low_complexity	1	51	(0)	3338061
4059	11.9	3.6	2.2	chr6	15555300	15555924	(155250055)	+	MER41B	LTR/ERV1	1	634	(0)	3338068
7743	12.0	1.4	2.3	chr6	15560382	15561652	(155244327)	+	MER41-int	LTR/ERV1	4688	5946	(0)	3338068
3997	14.3	1.4	1.9	chr6	15561654	15562289	(155243690)	+	MER41B	LTR/ERV1	2	634	(0)	3338068
532	30.6	10.8	0.8	chr6	15735654	15735887	(155070092)	+	MIR	SINE/MIR	3	262	(0)	3338355
335	29.9	14.6	2.8	chr6	15735885	15736101	(155069878)	C	MIRc	SINE/MIR	(19)	249	3	3338356
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
1741	19.2	0.7	0.0	chr6	15901984	15902285	(154903694)	+	AluJo	SINE/Alu	2	305	(7)	3338650
3945	13.5	3.6	6.5	chr6	15904250	15904961	(154901018)	C	LTR8	LTR/ERV1	(0)	691	1	3338657
324	25.4	1.6	6.7	chr6	15905052	15905114	(154900865)	+	L1ME4b	LINE/L1	710	772	(120)	3338658
1215	29.3	8.2	2.1	chr6	16005496	16006053	(154799926)	C	MLT1L	LTR/ERVL-MaLR	(5)	605	11	3338838
2444	19.0	3.0	4.1	chr6	16031415	16031909	(154774070)	+	MER61E	LTR/ERV1	85	531	(38)	3338877
2280	13.5	7.4	0.3	chr6	16044129	16044507	(154761472)	C	LTR47A	LTR/ERVL	(42)	410	3	3338899
3395	16.5	1.3	0.0	chr6	16109152	16109697	(154696282)	+	MER68	LTR/ERVL	11	563	(0)	3339010
1060	16.1	0.5	11.1	chr6	16214490	16214666	(154591313)	C	LTR8	LTR/ERV1	(522)	169	1	3339167
452	27.8	12.2	2.4	chr6	16214672	16214832	(154591147)	+	Charlie2b	DNA/hAT-Charlie	2457	2647	(135)	3339169
2699	20.3	1.0	0.4	chr6	16224109	16224613	(154581366)	C	HERV3-int	LTR/ERV1	(0)	8426	7919	3339190
945	33.3	4.3	3.7	chr6	16224613	16225093	(154580886)	C	HERV3-int	LTR/ERV1	(1386)	7040	6557	3339190
2815	20.6	1.9	9.6	chr6	16235561	16236310	(154569669)	C	LTR8	LTR/ERV1	(0)	691	1	3339205
2040	7.9	7.3	3.1	chr6	16266521	16266810	(154539169)	+	AluYk3	SINE/Alu	1	303	(8)	3339251
1627	13.1	0.6	11.3	chr6	16266811	16267081	(154538898)	+	LTR12_	LTR/ERV1	363	609	(79)	3339252
2325	6.4	0.7	3.0	chr6	16267082	16267379	(154538600)	+	AluYk2	SINE/Alu	1	291	(20)	3339253
17	15.5	0.0	7.1	chr6	16322723	16322764	(154483215)	+	(TC)n	Simple_repeat	1	42	(0)	3339338
18	23.3	0.0	0.0	chr6	16760221	16760273	(154045706)	+	(CCT)n	Simple_repeat	1	53	(0)	3340013
14	5.0	0.0	0.0	chr6	16760461	16760481	(154045498)	+	(GGC)n	Simple_repeat	1	21	(0)	3340014
1661	17.2	6.7	5.7	chr6	16839547	16839929	(153966050)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	4	3340143
2222	13.5	0.0	0.6	chr6	17511443	17511753	(153294226)	C	AluSz	SINE/Alu	(3)	309	1	3341285
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
6107	16.7	16.2	1.1	chr6	17728591	17729824	(153076155)	+	LTR12C	LTR/ERV1	3	1458	(121)	3341693
1587	16.6	0.4	4.2	chr6	17864492	17864774	(152941205)	C	AluJr	SINE/Alu	(18)	294	23	3341963
197	32.4	11.0	2.8	chr6	17907681	17907788	(152898191)	C	L2a	LINE/L2	(332)	3094	2977	3342044
964	30.0	4.1	5.2	chr6	17993555	17993814	(152812165)	C	MLT1I	LTR/ERVL-MaLR	(3)	408	142	3342202
2219	12.4	1.0	0.0	chr6	17993815	17994121	(152811858)	+	AluSx3	SINE/Alu	1	310	(1)	3342203
1352	15.6	0.0	1.8	chr6	18154570	18154794	(152651185)	+	AluJr4	SINE/Alu	84	304	(8)	3342549
619	27.3	13.9	6.5	chr6	19968256	19968713	(150837266)	C	MLT1H	LTR/ERVL-MaLR	(9)	540	44	3345181
1044	20.2	7.3	1.1	chr6	19999731	20000000	(150805979)	+	MLT1J1	LTR/ERVL-MaLR	1	288	(156)	3345231
371	21.1	3.8	0.0	chr6	20000079	20000154	(150805825)	+	MLT1J1	LTR/ERVL-MaLR	341	419	(25)	3345232
319	26.9	1.3	0.0	chr6	20000165	20000242	(150805737)	+	Arthur1B	DNA/hAT-Tip100	24	102	(1123)	3345233
2907	25.3	10.9	1.3	chr6	20000247	20001144	(150804835)	+	Arthur1B	DNA/hAT-Tip100	230	1223	(2)	3345234
4268	9.2	1.6	0.0	chr6	20188405	20188960	(150617019)	C	MER61E	LTR/ERV1	(4)	565	1	3345560
215	19.0	10.8	0.0	chr6	20203593	20203650	(150602329)	C	L2c	LINE/L2	(8)	3379	3315	3345591
1568	18.8	15.3	0.2	chr6	20203665	20204085	(150601894)	+	LTR54B	LTR/ERV1	1	496	(2)	3345592
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
4386	11.8	1.1	0.2	chr6	20272393	20273018	(150532961)	C	MER41B	LTR/ERV1	(0)	634	3	3345726
2175	10.4	0.0	0.0	chr6	20273025	20273334	(150532645)	C	AluSc	SINE/Alu	(0)	309	1	3345727
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
255	18.6	9.2	0.0	chr6	20811286	20811344	(149994635)	+	LTR65	LTR/ERV1	321	385	(284)	3346658
1813	25.4	6.7	5.5	chr6	20811418	20811824	(149994155)	C	L1MC5a	LINE/L1	(415)	2362	1944	3346659
12	21.7	0.0	0.0	chr6	21163470	21163501	(149642478)	+	(TCTTTT)n	Simple_repeat	1	32	(0)	3347210
2226	12.2	0.6	0.6	chr6	21163669	21163979	(149642000)	+	AluSq2	SINE/Alu	1	311	(2)	3347211
387	27.3	7.2	1.3	chr6	21987838	21987993	(148817986)	+	MER112	DNA/hAT-Charlie	1	166	(95)	3348673
4361	10.9	1.6	0.5	chr6	24756192	24756815	(146049164)	C	MER41B	LTR/ERV1	(0)	634	4	3352489
242	36.2	5.0	9.2	chr6	24756816	24756900	(146049079)	C	L3	LINE/CR1	(1506)	2593	2522	3352486
934	22.0	4.5	3.8	chr6	26041701	26041909	(144764070)	C	MER39	LTR/ERV1	(75)	632	418	3354534
23	12.7	1.8	5.2	chr6	26042055	26042111	(144763868)	+	A-rich	Low_complexity	1	58	(0)	3354536
4089	7.2	0.8	0.0	chr6	26042112	26042628	(144763351)	+	MER41C	LTR/ERV1	1	521	(0)	3354537
1463	16.1	0.9	0.0	chr6	26064766	26064988	(144740991)	C	AluSx	SINE/Alu	(87)	225	1	3354579
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
2479	18.4	0.5	0.2	chr6	26295852	26296266	(144509713)	C	LTR3	LTR/ERVK	(16)	416	1	3354957
1340	21.5	6.5	4.5	chr6	26303489	26303809	(144502170)	+	MER90a	LTR/ERV1	1	332	(282)	3354974
1693	12.9	4.0	8.5	chr6	26303810	26304127	(144501852)	C	AluSx	SINE/Alu	(9)	303	1	3354975
650	1.4	0.0	0.0	chr6	26328140	26328212	(144477767)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355034
3988	15.5	4.7	0.1	chr6	26351430	26352101	(144453878)	+	MER44D	DNA/TcMar-Tigger	1	704	(1)	3355089
3233	15.8	5.4	0.4	chr6	26352409	26352956	(144453023)	C	MER70-int	LTR/ERVL	(3832)	1191	615	3355088
168	13.9	2.1	2.4	chr6	26382583	26382911	(144423068)	+	A-rich	Low_complexity	1	336	(0)	3355153
30	11.5	0.0	2.0	chr6	26457698	26457746	(144348233)	+	(AG)n	Simple_repeat	1	49	(0)	3355268
1469	15.3	16.4	4.6	chr6	26474096	26474464	(144331515)	+	MER57C2	LTR/ERV1	14	434	(0)	3355296
300	15.4	0.0	0.0	chr6	26520451	26520502	(144285477)	C	L1ME3A	LINE/L1	(3)	6170	6119	3355395
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
668	0.0	0.0	0.0	chr6	26554122	26554195	(144251784)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3355457
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
511	4.0	0.0	17.8	chr6	26577104	26577193	(144228786)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	3355507
2383	10.9	7.2	8.6	chr6	26593423	26593742	(144212237)	+	MER65A	LTR/ERV1	1	312	(133)	3355539
2277	11.8	0.3	1.9	chr6	27129941	27130255	(143675724)	C	AluSx1	SINE/Alu	(2)	310	1	3356343
4115	12.1	6.3	0.3	chr6	27135841	27136436	(143669543)	C	MER41B	LTR/ERV1	(0)	634	1	3356348
229	32.4	8.5	0.0	chr6	27136437	27136507	(143669472)	C	L2	LINE/L2	(800)	2619	2543	3356347
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
643	0.0	0.0	0.0	chr6	27479674	27479745	(143326234)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	3356952
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
788	0.0	0.0	0.0	chr6	27545689	27545770	(143260209)	+	tRNA-Ser-TCA_	tRNA	1	82	(3)	3357088
754	2.4	0.0	0.0	chr6	27553413	27553494	(143252485)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3357102
15	9.0	12.2	1.8	chr6	27553496	27553544	(143252435)	+	(GACAT)n	Simple_repeat	1	55	(0)	3357103
12	10.6	2.9	5.7	chr6	27753211	27753244	(143052735)	+	G-rich	Low_complexity	1	35	(0)	3357535
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
3642	7.6	0.2	0.4	chr6	27773907	27774370	(143031609)	+	LTR2	LTR/ERV1	1	463	(0)	3357570
8465	3.2	0.0	0.1	chr6	27774460	27775428	(143030551)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3357571
639	19.5	0.8	0.8	chr6	27823704	27823821	(142982158)	C	AluJo	SINE/Alu	(194)	118	1	3357656
2044	13.6	1.0	0.7	chr6	27864767	27865076	(142940903)	+	AluSx1	SINE/Alu	2	312	(0)	3357726
626	1.4	0.0	0.0	chr6	27902908	27902978	(142903001)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	3357803
322	11.1	0.0	0.0	chr6	28000466	28000510	(142805469)	C	MER41G	LTR/ERV1	(0)	885	841	3357942
2309	14.9	16.0	3.7	chr6	28000512	28001046	(142804933)	+	LTR18B	LTR/ERVL	2	614	(0)	3357943
4976	14.1	3.2	2.2	chr6	28220221	28221124	(142584855)	C	MER49	LTR/ERV1	(8)	915	3	3358273
13	9.7	9.1	0.0	chr6	28336875	28336907	(142469072)	+	(GTTGTT)n	Simple_repeat	1	36	(0)	3358464
2522	11.9	20.7	8.3	chr6	28353865	28354395	(142451584)	C	LTR18B	LTR/ERVL	(0)	614	1	3358498
2259	13.5	4.1	0.0	chr6	28356923	28357249	(142448730)	C	LTR18C	LTR/ERVL	(4)	341	1	3358499
533	23.1	21.4	2.3	chr6	28357250	28357426	(142448553)	C	MIR	SINE/MIR	(28)	234	15	3358500
4101	12.7	2.8	3.7	chr6	28486474	28487171	(142318808)	C	LTR8	LTR/ERV1	(0)	691	1	3358707
1370	21.5	2.6	4.1	chr6	28487172	28487356	(142318623)	C	MLT1C	LTR/ERVL-MaLR	(203)	264	86	3358706
15	13.4	3.0	0.0	chr6	28489545	28489577	(142316402)	+	GA-rich	Low_complexity	1	34	(0)	3358714
2285	10.4	0.7	0.3	chr6	28495218	28495514	(142310465)	C	AluSx1	SINE/Alu	(14)	298	1	3358723
6617	9.2	0.9	2.5	chr6	28546995	28548203	(142257776)	+	L1PB1	LINE/L1	4975	6151	(0)	3358807
2978	16.4	10.3	0.4	chr6	28553928	28554484	(142251495)	+	LTR31	LTR/ERV1	1	619	(0)	3358816
833	25.9	16.9	8.1	chr6	28554485	28554878	(142251101)	+	LTR41C	LTR/ERVL	245	698	(3)	3358815
1768	17.5	5.3	5.5	chr6	28566269	28566685	(142239294)	+	LTR2C	LTR/ERV1	86	501	(0)	3358839
667	1.4	0.0	0.0	chr6	28710589	28710660	(142095319)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359065
629	4.0	0.0	0.0	chr6	28726018	28726091	(142079888)	+	tRNA-Thr-ACY_	tRNA	1	74	(3)	3359101
643	0.0	0.0	0.0	chr6	28758364	28758435	(142047544)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359169
600	4.2	0.0	0.0	chr6	28789770	28789841	(142016138)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359221
619	1.4	0.0	0.0	chr6	28838444	28838515	(141967464)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359318
10151	11.8	4.0	0.2	chr6	28865488	28867004	(141938975)	C	LTR12C	LTR/ERV1	(0)	1579	3	3359357
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
2294	8.8	1.0	0.3	chr6	28924297	28924601	(141881378)	+	AluSc	SINE/Alu	1	307	(2)	3359466
656	24.5	13.2	2.7	chr6	28945426	28945647	(141860332)	+	LTR50	LTR/ERVL	10	258	(537)	3359517
2216	12.6	7.8	4.2	chr6	29552528	29552933	(141253046)	C	MER57F	LTR/ERV1	(0)	435	14	3360239
3860	18.1	0.1	0.9	chr6	29964271	29964917	(140841062)	+	HERVP71A-int	LTR/ERV1	1116	1757	(5833)	3360889
392	15.7	1.4	0.0	chr6	29964918	29964987	(140840992)	+	LTR18B	LTR/ERVL	332	402	(212)	3360891
391	16.9	3.5	2.4	chr6	29965034	29965118	(140840861)	+	LTR18B	LTR/ERVL	268	353	(261)	3360892
302	32.6	0.7	2.2	chr6	30326147	30326284	(140479695)	C	L2b	LINE/L2	(2)	3373	3238	3361433
2094	8.3	0.4	0.4	chr6	30489008	30489272	(140316707)	C	AluSp	SINE/Alu	(48)	265	1	3361675
518	15.5	5.0	18.1	chr6	30489273	30489330	(140316649)	+	Charlie1a	DNA/hAT-Charlie	1411	1455	(0)	3361673
2028	13.2	2.0	1.3	chr6	30509649	30509823	(140296156)	C	AluSz	SINE/Alu	(6)	306	130	3361709
286	20.8	0.4	1.5	chr6	30541777	30541841	(140264138)	+	MamRep38	DNA/hAT	240	295	(0)	3361777
550	32.0	18.3	2.1	chr6	30541842	30543199	(140262780)	+	L2c	LINE/L2	1599	3246	(129)	3361778
12	30.0	0.0	4.8	chr6	30720277	30720338	(140085641)	+	(CCCG)n	Simple_repeat	1	62	(0)	3362083
922	20.2	0.0	0.0	chr6	30727229	30727386	(140078593)	C	AluJr	SINE/Alu	(16)	296	139	3362092
2046	12.5	0.7	1.3	chr6	30727400	30727703	(140078276)	C	AluSx	SINE/Alu	(10)	302	1	3362093
364	30.6	10.2	2.7	chr6	30781620	30781846	(140024133)	C	MIRc	SINE/MIR	(15)	253	1	3362216
33	2.9	2.8	0.0	chr6	30813400	30813435	(139992544)	+	(GT)n	Simple_repeat	1	37	(0)	3362295
260	35.8	14.3	0.5	chr6	31725783	31726203	(139079776)	+	L2c	LINE/L2	2327	2815	(604)	3363787
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
12	16.8	3.7	7.1	chr6	31806831	31806884	(138999095)	+	(AGCGCG)n	Simple_repeat	1	56	(0)	3363932
1638	6.5	0.0	5.6	chr6	31814127	31814357	(138991622)	+	AluY	SINE/Alu	1	218	(93)	3363946
1457	6.0	0.0	1.1	chr6	31814358	31814539	(138991440)	+	AluYc	SINE/Alu	119	298	(1)	3363947
1147	8.3	8.2	0.0	chr6	31821465	31821621	(138984358)	+	AluJb	SINE/Alu	136	306	(6)	3363955
652	17.6	3.7	5.1	chr6	31834263	31834400	(138971579)	C	AluJb	SINE/Alu	(176)	136	1	3363975
14	10.4	3.0	2.9	chr6	31834405	31834437	(138971542)	+	(TTTTG)n	Simple_repeat	1	34	(0)	3363980
18	4.1	0.0	6.9	chr6	31834547	31834575	(138971404)	+	(GC)n	Simple_repeat	1	29	(0)	3363981
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
2346	8.3	1.0	1.3	chr6	31864064	31864375	(138941604)	C	AluSx1	SINE/Alu	(1)	311	1	3364053
19	8.9	3.5	8.5	chr6	31902313	31902418	(138903561)	+	(CGCCCG)n	Simple_repeat	1	100	(0)	3364127
11	13.2	5.7	2.7	chr6	32953461	32953495	(137852484)	+	(CCTCCTT)n	Simple_repeat	1	37	(0)	3365656
240	30.4	12.5	5.2	chr6	32953532	32953872	(137852107)	C	L2c	LINE/L2	(4)	3422	3029	3365657
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
25	20.6	0.0	3.1	chr6	33200310	33200374	(137605605)	+	(CCG)n	Simple_repeat	1	65	(0)	3365969
3865	12.1	1.3	0.0	chr6	33377334	33377880	(137428099)	C	MER41A	LTR/ERV1	(0)	554	1	3366333
1452	5.1	22.2	1.9	chr6	33377927	33378140	(137427839)	+	AluYc	SINE/Alu	1	270	(29)	3366334
30	0.0	0.0	0.0	chr6	33789334	33789362	(137016617)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3367133
540	27.1	9.9	3.0	chr6	33840457	33840719	(136965260)	C	MLT1M	LTR/ERVL-MaLR	(348)	324	42	3367206
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
289	31.2	14.8	0.6	chr6	34277343	34277516	(136528463)	C	MIRb	SINE/MIR	(59)	209	7	3368023
418	29.4	3.8	5.6	chr6	34560564	34560779	(136245200)	+	MIRc	SINE/MIR	18	229	(39)	3368655
198	28.9	12.5	4.0	chr6	34561120	34561243	(136244736)	C	MIR	SINE/MIR	(33)	175	22	3368650
863	16.5	0.0	0.0	chr6	34664348	34664468	(136141511)	C	FLAM_A	SINE/Alu	(20)	122	2	3368858
17	39.7	0.0	0.0	chr6	34696784	34696874	(136109105)	+	(CCC)n	Simple_repeat	1	91	(0)	3368936
8454	3.4	0.0	0.1	chr6	34719460	34720428	(136085551)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3369011
14	15.7	0.0	5.1	chr6	34889208	34889246	(135916733)	+	G-rich	Low_complexity	1	39	(0)	3369411
440	27.5	2.0	2.0	chr6	35260653	35260804	(135545175)	+	MIR3	SINE/MIR	57	208	(0)	3369994
181	9.4	0.0	11.1	chr6	35726433	35726468	(135079511)	+	MIRb	SINE/MIR	188	219	(49)	3371012
54	0.0	0.0	0.0	chr6	35726537	35726582	(135079397)	+	(CA)n	Simple_repeat	1	46	(0)	3371013
13	14.5	3.2	0.0	chr6	35731388	35731418	(135074561)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	3371021
452	17.7	14.0	2.1	chr6	36350829	36350972	(134455007)	+	LTR67B	LTR/ERVL	457	620	(0)	3372311
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
46	2.3	0.0	0.0	chr6	36680308	36680351	(134125628)	+	(GT)n	Simple_repeat	1	44	(0)	3373075
1085	25.3	12.8	7.9	chr6	36820519	36820658	(133985321)	C	L2a	LINE/L2	(0)	3426	3265	3373363
1731	17.5	1.0	3.2	chr6	36820659	36820966	(133985013)	+	AluJo	SINE/Alu	2	302	(10)	3373364
14640	10.0	5.4	1.8	chr6	36884285	36885063	(133920916)	+	MER57-int	LTR/ERV1	6731	7537	(0)	3373495
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
225	19.1	0.0	0.0	chr6	37083843	37083884	(133722095)	+	L4_B_Mam	LINE/RTE-X	4896	4937	(4)	3373899
2327	10.7	0.7	0.0	chr6	37109035	37109344	(133696635)	C	AluSp	SINE/Alu	(1)	312	1	3373968
1572	13.6	13.5	3.2	chr6	37109345	37109484	(133696495)	C	AluJo	SINE/Alu	(180)	132	1	3373967
910	26.6	1.2	2.5	chr6	37109844	37110107	(133695872)	+	MIRc	SINE/MIR	7	268	(0)	3373970
931	18.3	5.4	1.1	chr6	37155466	37155642	(133650337)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	3374098
375	30.2	6.8	6.3	chr6	37155643	37155714	(133650265)	C	L2c	LINE/L2	(137)	3250	3177	3374097
261	31.7	4.6	3.7	chr6	37155910	37156017	(133649962)	+	MIRc	SINE/MIR	32	140	(128)	3374099
410	14.6	19.6	0.0	chr6	37175710	37175791	(133630188)	C	MER3	DNA/hAT-Charlie	(107)	102	1	3374141
1913	12.3	4.6	3.7	chr6	37180588	37180887	(133625092)	+	AluJr4	SINE/Alu	1	303	(9)	3374159
2049	13.8	0.7	0.0	chr6	37180890	37181185	(133624794)	+	AluSx	SINE/Alu	1	298	(14)	3374160
1622	14.1	0.0	13.8	chr6	37181439	37181800	(133624179)	C	AluJb	SINE/Alu	(0)	312	1	3374162
1145	6.5	8.4	0.0	chr6	37181823	37181975	(133624004)	C	AluSx1	SINE/Alu	(13)	299	133	3374163
2173	8.5	0.0	5.1	chr6	37181976	37182301	(133623678)	C	AluY	SINE/Alu	(0)	311	1	3374164
2382	10.7	0.0	1.9	chr6	37189506	37189824	(133616155)	+	AluSq2	SINE/Alu	1	313	(0)	3374188
1037	13.7	0.0	0.6	chr6	37204431	37204592	(133601387)	+	L1PA15	LINE/L1	5870	6030	(135)	3374230
2316	11.6	0.0	0.0	chr6	37204603	37204912	(133601067)	+	AluSz	SINE/Alu	2	311	(1)	3374231
1760	27.1	6.7	2.3	chr6	37207620	37208528	(133597451)	C	L2a	LINE/L2	(1)	3425	2449	3374237
1890	23.2	5.2	4.3	chr6	37240131	37240685	(133565294)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3374322
483	24.9	1.1	11.3	chr6	37242881	37243075	(133562904)	C	MLT1L	LTR/ERVL-MaLR	(305)	305	131	3374328
3615	16.9	1.5	1.3	chr6	37426706	37427322	(133378657)	C	L1M4c	LINE/L1	(5750)	1817	1200	3374662
353	17.6	5.1	0.0	chr6	37427328	37427401	(133378578)	C	L1M4c	LINE/L1	(7426)	1012	935	3374662
2318	12.2	0.0	0.0	chr6	37428446	37428757	(133377222)	C	AluSx	SINE/Alu	(0)	312	1	3374676
2198	14.6	3.6	5.5	chr6	37428758	37428806	(133377173)	C	MER65A	LTR/ERV1	(392)	53	5	3374674
3974	24.3	3.5	1.9	chr6	37428807	37429335	(133376644)	C	L1MEf	LINE/L1	(4882)	1758	1215	3374673
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
18	30.4	1.7	5.1	chr6	38639870	38639984	(132165995)	+	(CGCCGC)n	Simple_repeat	1	117	(0)	3376682
22	32.4	4.0	0.0	chr6	39037339	39037437	(131768542)	+	(CT)n	Simple_repeat	1	103	(0)	3377369
214	26.5	14.4	0.0	chr6	39226034	39226116	(131579863)	C	MIRb	SINE/MIR	(117)	151	55	3377682
197	22.7	6.4	0.0	chr6	39226148	39226191	(131579788)	+	L2b	LINE/L2	3313	3359	(16)	3377683
190	29.6	0.0	9.0	chr6	39950165	39950253	(130855726)	C	L2	LINE/L2	(1882)	1537	1457	3378820
314	29.9	5.4	1.9	chr6	39950283	39950442	(130855537)	C	MLT1K	LTR/ERVL-MaLR	(24)	571	406	3378821
668	28.2	5.0	3.4	chr6	39950539	39950812	(130855167)	C	MLT1K	LTR/ERVL-MaLR	(343)	267	5	3378821
2682	10.9	2.9	3.1	chr6	39993176	39993620	(130812359)	C	HERV1_LTRe	LTR/ERV1	(0)	537	94	3378877
321	29.5	1.9	0.9	chr6	40399822	40399927	(130406052)	C	Charlie22a	DNA/hAT-Charlie	(352)	139	33	3379384
285	23.1	0.0	13.3	chr6	40400177	40400266	(130405713)	+	L2c	LINE/L2	3295	3372	(15)	3379387
17	15.3	3.6	5.2	chr6	41201836	41201891	(129604088)	+	(CCTCTC)n	Simple_repeat	1	58	(0)	3380775
4536	6.3	0.5	0.0	chr6	41292372	41292922	(129513057)	C	MER41A	LTR/ERV1	(0)	554	1	3380903
3841	16.2	6.6	1.9	chr6	41292979	41293769	(129512210)	+	L1M4	LINE/L1	3645	4475	(1671)	3380904
1880	16.0	4.4	0.3	chr6	41320477	41320802	(129485177)	C	LTR18C	LTR/ERVL	(5)	340	1	3380945
2324	10.8	0.0	0.0	chr6	41320849	41321144	(129484835)	C	AluSx	SINE/Alu	(16)	296	1	3380946
491	25.8	4.8	2.1	chr6	41498921	41499161	(129306818)	C	MIRc	SINE/MIR	(0)	268	12	3381279
705	27.1	7.1	2.8	chr6	42028634	42028849	(128777130)	+	MIRb	SINE/MIR	25	250	(18)	3382374
1151	23.3	17.9	7.2	chr6	42199452	42199870	(128606109)	+	MLT1G3	LTR/ERVL-MaLR	79	577	(2)	3382776
352	18.5	0.0	0.0	chr6	42563659	42563723	(128242256)	C	L2a	LINE/L2	(24)	3402	3338	3383531
245	35.8	0.0	2.1	chr6	43054011	43054107	(127751872)	C	MIR3	SINE/MIR	(17)	191	97	3384600
22	23.3	0.0	0.0	chr6	43054173	43054218	(127751761)	+	A-rich	Low_complexity	1	46	(0)	3384601
14	17.7	0.0	0.0	chr6	43243536	43243567	(127562412)	+	G-rich	Low_complexity	1	32	(0)	3384993
14	27.2	2.0	0.0	chr6	43510376	43510424	(127295555)	+	(CGGCCC)n	Simple_repeat	1	50	(0)	3385490
1655	18.1	4.2	0.3	chr6	43619096	43619394	(127186585)	+	AluJb	SINE/Alu	2	312	(0)	3385700
2184	8.7	1.3	0.7	chr6	43628082	43628391	(127177588)	+	AluSx1	SINE/Alu	1	312	(0)	3385707
669	15.7	12.2	11.2	chr6	43628392	43628462	(127177517)	+	MER5A	DNA/hAT-Charlie	112	189	(0)	3385706
41	0.0	0.0	0.0	chr6	43628471	43628505	(127177474)	+	(TG)n	Simple_repeat	1	35	(0)	3385708
502	29.0	8.0	5.2	chr6	43635317	43635607	(127170372)	+	L2b	LINE/L2	3076	3375	(0)	3385717
12	6.4	8.1	5.0	chr6	43640682	43640718	(127165261)	+	(CTGATGG)n	Simple_repeat	1	40	(0)	3385733
47	4.2	0.0	0.0	chr6	43702713	43702761	(127103218)	+	(TG)n	Simple_repeat	1	49	(0)	3385855
2794	13.7	5.0	1.4	chr6	43808804	43809415	(126996564)	C	L1MB3	LINE/L1	(406)	5777	5146	3386046
324	24.8	7.4	0.4	chr6	43809507	43809617	(126996362)	+	L2b	LINE/L2	3258	3387	(0)	3386049
994	23.8	1.1	0.7	chr6	43909488	43909751	(126896228)	C	MIR	SINE/MIR	(1)	267	4	3386237
239	37.1	7.2	3.5	chr6	43909969	43910141	(126895838)	C	MIRc	SINE/MIR	(87)	181	2	3386238
661	25.6	6.6	2.8	chr6	43916717	43916936	(126889043)	C	MIRb	SINE/MIR	(1)	261	22	3386243
1062	22.7	1.0	0.0	chr6	43916937	43917143	(126888836)	C	MER3	DNA/hAT-Charlie	(0)	209	1	3386244
378	29.5	6.5	1.5	chr6	44052378	44052508	(126753471)	C	LTR88c	LTR/Gypsy?	(350)	487	350	3386479
1324	28.7	11.8	4.7	chr6	44052538	44052761	(126753218)	+	LTR67B	LTR/ERVL	1	242	(378)	3386480
279	26.7	6.5	0.0	chr6	44064351	44064451	(126741528)	+	MIR3	SINE/MIR	36	143	(65)	3386501
1623	14.3	0.8	2.4	chr6	44085060	44085311	(126720668)	+	AluJr	SINE/Alu	65	312	(0)	3386534
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
2000	19.8	10.5	3.6	chr6	45155226	45155727	(125650252)	C	MER87	LTR/ERV1	(0)	541	1	3388233
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
4360	15.0	7.6	0.0	chr6	47416216	47416973	(123389006)	C	LTR8B	LTR/ERV1	(0)	820	1	3391721
1175	27.1	5.3	2.0	chr6	47416974	47417042	(123388937)	+	LTR16C	LTR/ERVL	419	485	(4)	3391720
1189	31.5	7.4	1.3	chr6	50962297	50963046	(119842933)	C	L2a	LINE/L2	(8)	3418	2610	3396392
1432	21.6	4.3	0.7	chr6	51107607	51107897	(119698082)	C	AluJr	SINE/Alu	(10)	302	1	3396591
1260	28.3	9.0	6.1	chr6	51107898	51108299	(119697680)	C	MLT1H	LTR/ERVL-MaLR	(124)	425	6	3396590
819	26.0	11.7	0.7	chr6	52620154	52620662	(118185317)	+	L2a	LINE/L2	2789	3426	(0)	3398827
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
13	20.1	1.7	8.2	chr6	63572479	63572538	(107233441)	+	(CGGCT)n	Simple_repeat	1	61	(0)	3410802
1241	24.0	4.4	5.1	chr6	67879083	67879506	(102926473)	+	MER39	LTR/ERV1	1	603	(104)	3416014
1477	24.3	8.7	1.0	chr6	67889062	67889473	(102916506)	C	LTR7C	LTR/ERV1	(0)	471	25	3416018
4845	9.1	1.8	0.4	chr6	68040222	68040931	(102765048)	C	LTR30	LTR/ERV1	(0)	722	3	3416206
16	13.2	0.0	0.0	chr6	70337466	70337490	(100468489)	+	(T)n	Simple_repeat	1	25	(0)	3419066
2930	8.0	4.7	0.0	chr6	70394626	70395013	(100410966)	+	MER48	LTR/ERV1	1	407	(0)	3419144
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
1508	21.1	9.7	5.4	chr6	73422194	73422702	(97383277)	+	MLT1E1A	LTR/ERVL-MaLR	54	677	(3)	3423386
3782	9.9	10.4	2.2	chr6	73564658	73565059	(97240920)	+	MER41B	LTR/ERV1	1	456	(178)	3423773
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
2038	11.5	12.3	0.0	chr6	83867684	83867996	(86937983)	+	LTR18A	LTR/ERVL	1	357	(0)	3437088
1716	25.0	10.1	8.6	chr6	83974325	83975082	(86830897)	C	LTR19C	LTR/ERV1	(2)	777	7	3437229
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
482	25.6	4.8	2.0	chr6	87723262	87723414	(83082565)	+	MLT1O	LTR/ERVL-MaLR	94	328	(344)	3442078
16	0.0	5.0	0.0	chr6	87723579	87723598	(83082381)	+	(AG)n	Simple_repeat	1	21	(0)	3442079
2904	16.5	6.2	4.8	chr6	87741986	87742442	(83063537)	C	MLT1F1	LTR/ERVL-MaLR	(1)	568	102	3442116
1441	10.9	0.0	0.0	chr6	87742443	87742626	(83063353)	+	AluSx1	SINE/Alu	3	186	(126)	3442117
3697	13.3	0.4	1.8	chr6	89008407	89008972	(81797007)	C	MER41B	LTR/ERV1	(73)	561	4	3443960
640	19.3	49.4	0.0	chr6	89008975	89009136	(81796843)	+	MER34-int	LTR/ERV1	7965	8206	(1)	3443961
4299	10.7	3.6	0.3	chr6	89009625	89010215	(81795764)	+	LTR9	LTR/ERV1	2	612	(0)	3443962
403	25.5	9.4	0.5	chr6	89777110	89777302	(81028677)	+	L1MC5a	LINE/L1	2023	2234	(543)	3445335
3093	12.4	9.9	2.6	chr6	89777311	89777962	(81028017)	+	LTR8B	LTR/ERV1	1	663	(64)	3445336
32	3.0	0.0	0.0	chr6	90296785	90296818	(80509161)	+	(GCT)n	Simple_repeat	1	34	(0)	3446171
23	21.4	3.8	2.2	chr6	90297035	90297105	(80508874)	+	G-rich	Low_complexity	1	72	(0)	3446172
4071	12.4	2.7	1.3	chr6	96519934	96520553	(74285426)	C	MER41B	LTR/ERV1	(5)	629	1	3453833
367	6.7	0.0	9.1	chr6	96520556	96520621	(74285358)	C	L1MA3	LINE/L1	(200)	6104	6042	3453832
2507	14.7	8.5	0.0	chr6	96520645	96521074	(74284905)	C	MER4A1	LTR/ERV1	(2)	470	1	3453834
41	0.0	0.0	0.0	chr6	96924802	96924836	(73881143)	+	(CA)n	Simple_repeat	1	35	(0)	3454325
13	24.0	2.2	2.1	chr6	100413067	100413112	(70392867)	+	(CCA)n	Simple_repeat	1	47	(0)	3458978
192	32.8	1.7	1.7	chr6	100413152	100413210	(70392769)	+	L2b	LINE/L2	3230	3288	(87)	3458979
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
409	36.9	9.3	5.4	chr6	105805207	105806174	(64999805)	C	L2	LINE/L2	(581)	2838	1829	3465944
405	24.6	0.8	0.8	chr6	106887524	106887642	(63918337)	C	L2a	LINE/L2	(54)	3372	3254	3467686
1329	15.9	5.8	3.7	chr6	106887650	106887679	(63918300)	+	MER39	LTR/ERV1	1	30	(677)	3467687
4409	12.5	1.4	5.0	chr6	106887680	106887815	(63918164)	+	LTR8	LTR/ERV1	1	141	(550)	3467688
2193	9.7	0.0	0.7	chr6	106887816	106888103	(63917876)	C	AluSx1	SINE/Alu	(1)	311	26	3467689
15	22.7	5.7	2.7	chr6	107028291	107028360	(63777619)	+	(CGCGC)n	Simple_repeat	1	74	(0)	3468022
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
2336	19.8	5.6	0.8	chr6	109304290	109304783	(61501196)	C	LTR53	LTR/ERVL	(0)	519	1	3471962
1385	31.0	14.9	4.5	chr6	109771723	109772452	(61033527)	+	L2	LINE/L2	1578	2424	(995)	3472633
357	39.9	8.1	2.5	chr6	110819381	110819655	(59986324)	C	L2	LINE/L2	(723)	2696	2409	3474371
3230	16.0	3.5	2.6	chr6	110819659	110820224	(59985755)	+	MER41B	LTR/ERV1	1	571	(63)	3474373
1659	9.4	0.0	0.0	chr6	110953610	110953822	(59852157)	+	MER41-int	LTR/ERV1	5730	5942	(4)	3474704
4065	9.5	0.0	2.3	chr6	110953825	110954349	(59851630)	+	MER41B	LTR/ERV1	1	521	(113)	3474704
19	9.9	8.3	4.6	chr6	119078776	119078835	(51727144)	+	(CCGCAG)n	Simple_repeat	1	65	(0)	3486086
2888	12.0	17.1	2.5	chr6	119326020	119326541	(51479438)	C	LTR18B	LTR/ERVL	(0)	614	1	3486464
1738	11.7	12.9	3.3	chr6	119326546	119326881	(51479098)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3486465
3074	20.3	1.4	0.8	chr6	119566581	119567221	(51238758)	+	LTR9D	LTR/ERV1	1	645	(0)	3486744
881	28.4	3.5	0.4	chr6	121573392	121573735	(49232244)	C	L2a	LINE/L2	(196)	3230	2870	3489241
13	17.6	0.0	6.8	chr6	122471075	122471118	(48334861)	+	A-rich	Low_complexity	1	44	(0)	3490450
290	42.2	2.9	2.9	chr6	125598118	125598395	(45207584)	C	L2c	LINE/L2	(142)	3245	2968	3494561
271	38.8	6.2	0.5	chr6	125598472	125598668	(45207311)	C	L2c	LINE/L2	(556)	2863	2655	3494561
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
421	35.2	12.7	5.0	chr6	129660055	129660572	(41145407)	C	L2c	LINE/L2	(447)	2972	2409	3499741
46	2.2	2.1	0.0	chr6	129667470	129667516	(41138463)	+	(TG)n	Simple_repeat	1	48	(0)	3499763
15	20.7	0.0	2.9	chr6	129667517	129667543	(41138436)	+	(AT)n	Simple_repeat	2	28	(0)	3499764
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
5826	15.4	3.3	2.1	chr6	133608394	133609448	(37196531)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(0)	1068	1	3505466
2481	29.0	11.8	9.7	chr6	133609583	133610595	(37195384)	+	L2a	LINE/L2	1397	2472	(954)	3505468
474	28.2	11.5	9.6	chr6	134022735	134023118	(36782861)	+	MER65D	LTR/ERV1	1	392	(81)	3506034
2453	16.4	4.5	8.9	chr6	134291282	134291778	(36514201)	+	LTR54	LTR/ERV1	5	490	(20)	3506601
624	25.1	3.9	0.0	chr6	135088773	135088960	(35717019)	C	MER63A	DNA/hAT-Blackjack	(52)	158	1	3507935
20	14.0	0.0	0.0	chr6	135568388	135568419	(35237560)	+	(T)n	Simple_repeat	1	32	(0)	3508644
447	19.9	5.3	8.7	chr6	136236851	136236988	(34568991)	+	HAL1	LINE/L1	48	180	(2327)	3509559
558	26.3	11.3	7.0	chr6	136237056	136237529	(34568450)	+	HAL1	LINE/L1	586	1082	(1425)	3509559
605	32.3	7.8	1.9	chr6	136403294	136403510	(34402469)	C	MIR	SINE/MIR	(23)	245	7	3509828
1236	25.7	12.1	1.6	chr6	136405140	136405874	(34400105)	C	L2a	LINE/L2	(7)	3419	2581	3509831
563	32.1	3.6	1.5	chr6	136647237	136647483	(34158496)	C	MIRb	SINE/MIR	(8)	260	2	3510223
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
1231	16.6	8.0	0.4	chr6	137170726	137170967	(33635012)	C	LTR47A	LTR/ERVL	(190)	262	1	3511072
2825	3.3	0.0	0.3	chr6	137864055	137864353	(32941626)	+	AluY	SINE/Alu	1	298	(13)	3512111
200	22.2	10.0	0.0	chr6	137901596	137901649	(32904330)	+	L2a	LINE/L2	3357	3416	(10)	3512161
13	22.8	5.9	0.0	chr6	138773803	138773853	(32032126)	+	(GGCTGT)n	Simple_repeat	1	54	(0)	3513523
485	33.8	0.0	0.7	chr6	138825085	138825233	(31980746)	C	L2a	LINE/L2	(196)	3179	3032	3513618
30	6.0	0.0	0.0	chr6	142944420	142944454	(27861525)	+	(CA)n	Simple_repeat	1	35	(0)	3519174
13	21.6	0.0	0.0	chr6	142944530	142944561	(27861418)	+	GA-rich	Low_complexity	1	32	(0)	3519175
3312	11.5	0.2	0.0	chr6	143064809	143065278	(27740701)	C	LTR7C	LTR/ERV1	(0)	471	1	3519342
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
623	25.0	12.0	1.8	chr6	143804889	143805112	(27000867)	C	MIRc	SINE/MIR	(4)	264	15	3520444
2524	7.9	0.0	0.3	chr6	143805198	143805500	(27000479)	+	AluSx3	SINE/Alu	1	302	(9)	3520445
1901	15.1	0.0	1.7	chr6	143806682	143806972	(26999007)	+	AluJr	SINE/Alu	11	296	(16)	3520447
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
753	28.6	7.6	6.6	chr6	144647332	144647799	(26158180)	C	MER65D	LTR/ERV1	(0)	473	1	3521696
32	0.0	0.0	0.0	chr6	144872935	144872964	(25933015)	+	(AAAT)n	Simple_repeat	1	30	(0)	3521995
3952	11.9	6.0	3.1	chr6	144872965	144873064	(25932915)	C	MER41B	LTR/ERV1	(539)	95	1	3521993
218	28.8	1.5	0.0	chr6	144886951	144887016	(25918963)	+	MIR	SINE/MIR	195	261	(1)	3522016
323	27.7	8.2	2.9	chr6	145893693	145893796	(24912183)	+	MamRep137	DNA/TcMar-Tigger	135	244	(266)	3523325
1569	23.6	9.7	0.9	chr6	146288008	146288460	(24517519)	+	MLT1D-int	LTR/ERVL-MaLR	1	497	(874)	3523859
2358	11.2	0.0	0.0	chr6	146288493	146288805	(24517174)	C	AluSq2	SINE/Alu	(0)	313	1	3523860
3916	10.7	9.1	1.1	chr6	146879944	146880550	(23925429)	+	PABL_A	LTR/ERV1	1	660	(0)	3524628
191	23.6	9.8	1.8	chr6	146884905	146884960	(23921019)	C	MIR3	SINE/MIR	(87)	121	61	3524634
302	32.9	0.4	4.2	chr6	146886813	146886923	(23919056)	C	MIRc	SINE/MIR	(114)	154	41	3524636
4557	10.5	0.9	0.9	chr6	146887061	146887694	(23918285)	C	MER41B	LTR/ERV1	(0)	634	1	3524637
424	36.7	5.4	6.6	chr6	146897988	146898533	(23907446)	+	L3	LINE/CR1	3272	3810	(289)	3524648
219	26.7	8.8	0.4	chr6	146915906	146916023	(23889956)	C	MIR1_Amn	SINE/MIR	(93)	175	47	3524669
1546	30.7	3.5	1.3	chr6	147126605	147127139	(23678840)	+	MLT1H1	LTR/ERVL-MaLR	1	547	(8)	3524976
317	29.8	11.0	0.0	chr6	147161439	147161559	(23644420)	C	L2a	LINE/L2	(0)	3426	3291	3525022
2856	18.2	2.7	1.3	chr6	147166341	147166891	(23639088)	+	MER89	LTR/ERV1	1	559	(0)	3525033
4112	9.0	0.6	0.0	chr6	147449273	147449816	(23356163)	C	MER41A	LTR/ERV1	(7)	547	1	3525419
1779	16.3	11.2	2.8	chr6	147660511	147660901	(23145078)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3525720
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
557	25.1	15.1	0.9	chr6	149728652	149728969	(21077010)	+	L2a	LINE/L2	2881	3245	(181)	3529035
1655	23.5	3.0	0.7	chr6	149933919	149934347	(20871632)	C	MER119	DNA/hAT-Charlie	(38)	545	107	3529410
201	30.4	10.7	1.1	chr6	149963663	149963755	(20842224)	+	MIR1_Amn	SINE/MIR	84	186	(44)	3529448
526	34.4	5.5	9.3	chr6	150150789	150151509	(20654470)	+	L2b	LINE/L2	2039	2730	(689)	3529758
235	27.5	10.7	1.8	chr6	150271358	150271468	(20534511)	C	LTR67B	LTR/ERVL	(174)	446	325	3529949
3086	17.4	2.8	0.8	chr6	150271671	150272203	(20533776)	C	LTR75_1	LTR/ERV1	(0)	546	3	3529950
1978	14.5	0.3	2.9	chr6	150273270	150273579	(20532400)	C	AluJo	SINE/Alu	(10)	302	1	3529951
534	27.1	11.4	0.0	chr6	150318711	150318865	(20487114)	+	MIR	SINE/MIR	72	246	(16)	3530027
1674	11.9	0.0	0.0	chr6	150318893	150319148	(20486831)	+	AluSz6	SINE/Alu	62	312	(0)	3530028
15	18.5	0.0	6.1	chr6	150865621	150865669	(19940310)	+	(CCGGCCG)n	Simple_repeat	1	49	(0)	3530872
28	0.0	0.0	0.0	chr6	150865722	150865747	(19940232)	+	(CCG)n	Simple_repeat	1	26	(0)	3530873
293	34.5	4.0	6.3	chr6	152232849	152233055	(18572924)	C	L2c	LINE/L2	(3)	3384	3183	3533226
1877	14.3	4.8	0.4	chr6	155078067	155078345	(15727634)	C	AluJb	SINE/Alu	(20)	292	1	3537592
1284	32.4	10.2	3.5	chr6	155079976	155080441	(15725538)	C	Tigger10	DNA/TcMar-Tigger	(91)	1753	1221	3537596
2606	25.8	11.7	1.3	chr6	157317057	157317930	(13488049)	+	L2	LINE/L2	1736	2712	(707)	3540704
2292	8.8	0.3	1.9	chr6	157392872	157393178	(13412801)	C	AluSp	SINE/Alu	(11)	302	1	3540839
2595	4.5	0.0	1.3	chr6	157515452	157515764	(13290215)	C	AluY	SINE/Alu	(2)	309	1	3541040
1205	26.0	8.6	2.1	chr6	157515858	157516325	(13289654)	C	L1ME3A	LINE/L1	(1)	6172	5672	3541041
442	22.2	1.1	1.1	chr6	157534443	157534533	(13271446)	+	LTR90A	LTR	828	918	(58)	3541066
6503	12.0	1.0	1.0	chr6	157752214	157753181	(13052798)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3541407
5073	13.8	3.5	3.6	chr6	157753182	157753217	(13052762)	+	L1MB1	LINE/L1	6130	6163	(5)	3541404
16	0.0	0.0	0.0	chr6	157753233	157753250	(13052729)	+	(A)n	Simple_repeat	1	18	(0)	3541408
4506	6.2	0.5	0.2	chr6	157754759	157755310	(13050669)	C	MER41A	LTR/ERV1	(0)	554	1	3541411
205	40.0	5.1	3.6	chr6	157758249	157758694	(13047285)	C	L2c	LINE/L2	(449)	2970	2518	3541416
246	30.8	8.0	0.0	chr6	157758705	157758808	(13047171)	+	L2a	LINE/L2	3311	3423	(3)	3541420
276	37.5	0.0	0.0	chr6	157758851	157758978	(13047001)	C	L2c	LINE/L2	(966)	2453	2326	3541416
565	21.6	5.6	0.7	chr6	158004004	158004138	(12801841)	+	LTR87	LTR/ERVL?	480	621	(3)	3541802
4781	9.6	1.6	0.2	chr6	158004149	158004773	(12801206)	+	MER41B	LTR/ERV1	1	634	(0)	3541803
261	29.6	10.0	0.0	chr6	158366276	158366383	(12439596)	C	L1MEi	LINE/L1	(1620)	592	473	3542407
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
10435	14.2	7.8	1.5	chr6	158577083	158577808	(12228171)	+	L1M4c	LINE/L1	1081	1861	(4785)	3542771
2501	8.7	0.3	0.0	chr6	158577809	158578120	(12227859)	+	AluSp	SINE/Alu	1	313	(0)	3542773
4399	6.1	2.3	0.0	chr6	158711538	158712078	(12093901)	C	MER41A	LTR/ERV1	(0)	554	1	3542994
9659	15.2	4.9	3.8	chr6	158712079	158712690	(12093289)	C	Ricksha_c	DNA/MULE-MuDR	(1348)	700	69	3542992
352	34.4	4.7	0.6	chr6	158835565	158835728	(11970251)	C	MIRb	SINE/MIR	(93)	175	5	3543205
2769	28.8	6.3	5.2	chr6	159497982	159499402	(11306577)	C	L1MEg	LINE/L1	(4484)	1931	491	3544146
2315	19.1	7.5	5.9	chr6	159984194	159984754	(10821225)	+	Tigger3c	DNA/TcMar-Tigger	22	592	(10)	3544939
1309	13.3	14.9	0.8	chr6	159984768	159985025	(10820954)	+	MER44A	DNA/TcMar-Tigger	5	305	(34)	3544940
2482	13.1	2.4	0.8	chr6	160520332	160520822	(10285157)	C	LTR12E	LTR/ERV1	(823)	499	1	3545512
496	35.8	8.0	1.6	chr6	161379894	161380409	(9425570)	+	L2c	LINE/L2	2764	3316	(71)	3546591
329	30.3	1.6	1.6	chr6	163180900	163181023	(7624956)	C	MIRb	SINE/MIR	(105)	163	33	3549124
708	23.5	4.3	0.6	chr6	163777362	163777541	(7028438)	+	MER58A	DNA/hAT-Charlie	34	220	(4)	3549910
4662	9.9	0.0	1.1	chr6	163940862	163941501	(6864478)	+	MER41B	LTR/ERV1	1	633	(1)	3550141
4256	11.2	2.5	0.3	chr6	164337813	164338432	(6467547)	+	MER41B	LTR/ERV1	1	634	(0)	3550658
289	31.7	11.5	7.0	chr6	166629853	166630157	(4175822)	C	L2c	LINE/L2	(8)	3379	3045	3553464
4315	14.0	2.4	2.3	chr6	167099884	167100591	(3705388)	C	LTR62	LTR/ERVL	(0)	709	1	3554031
2171	11.8	0.3	0.3	chr6	167690310	167690606	(3115373)	+	AluSx1	SINE/Alu	1	297	(15)	3554659
3352	10.0	0.2	5.6	chr6	167690607	167690988	(3114991)	+	MER4A1	LTR/ERV1	110	470	(2)	3554658
2385	19.5	5.5	2.3	chr6	167855886	167856416	(2949563)	+	MER44B	DNA/TcMar-Tigger	1	549	(1)	3554881
497	34.2	7.8	0.0	chr6	167857259	167857460	(2948519)	+	L3	LINE/CR1	2903	3121	(978)	3554883
213	32.0	2.3	4.6	chr6	168035740	168035870	(2770109)	+	MIRc	SINE/MIR	24	151	(117)	3555076
2753	15.8	3.8	9.3	chr6	168105629	168106166	(2699813)	C	MER84	LTR/ERV1	(0)	507	1	3555141
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
245	32.7	17.5	0.6	chr6	169898837	169898993	(906986)	+	L3	LINE/CR1	3779	3967	(132)	3556956
18	10.5	0.0	0.0	chr6	169899069	169899099	(906880)	+	(CGCCC)n	Simple_repeat	1	31	(0)	3556957
477	28.8	6.4	5.1	chr7	125527	125742	(159220231)	C	L1ME3A	LINE/L1	(0)	6173	5955	3557987
13	14.9	5.1	2.4	chr7	1160308	1160346	(158185627)	+	(CCCGC)n	Simple_repeat	1	41	(0)	3559395
16	9.8	0.0	0.0	chr7	1418726	1418747	(157927226)	+	(C)n	Simple_repeat	1	22	(0)	3559881
227	18.8	0.0	0.0	chr7	2758183	2758230	(156587743)	C	Charlie1b	DNA/hAT-Charlie	(92)	431	384	3561945
292	19.2	1.9	0.0	chr7	2758244	2758295	(156587678)	+	Alu	SINE/Alu	1	53	(80)	3561946
479	32.5	0.7	0.0	chr7	2758278	2758428	(156587545)	C	Charlie1	DNA/hAT-Charlie	(2547)	234	83	3561947
345	21.2	1.7	0.9	chr7	2758469	2758621	(156587352)	+	MLT1E1	LTR/ERVL-MaLR	52	255	(399)	3561948
2262	12.0	0.0	1.3	chr7	2771009	2771324	(156574649)	+	AluSx1	SINE/Alu	1	312	(0)	3561973
1860	26.1	8.6	2.7	chr7	2771325	2772148	(156573825)	C	L1ME1	LINE/L1	(44)	6290	5258	3561972
893	14.6	0.0	0.0	chr7	5452887	5453016	(153892957)	C	FLAM_C	SINE/Alu	(13)	130	1	3567067
230	33.6	15.0	3.8	chr7	5513927	5514323	(153831650)	+	L2a	LINE/L2	2921	3426	(0)	3567205
16	28.7	2.5	3.6	chr7	5592618	5592698	(153753275)	+	(GGC)n	Simple_repeat	1	83	(0)	3567435
445	15.8	1.3	0.0	chr7	6349150	6349225	(152996748)	+	L1MB3	LINE/L1	6060	6136	(47)	3569144
4301	6.5	1.3	1.1	chr7	6988359	6988915	(152357058)	C	LTR6B	LTR/ERV1	(0)	558	1	3570501
2320	10.4	0.0	0.3	chr7	6988916	6989232	(152356741)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	3570502
61	19.2	0.7	2.9	chr7	13849679	13849817	(145496156)	+	A-rich	Low_complexity	1	140	(0)	3579255
536	12.9	5.6	9.0	chr7	14001310	14001420	(145344553)	+	LTR54	LTR/ERV1	77	183	(327)	3579468
797	23.7	1.4	0.9	chr7	14001448	14001664	(145344309)	+	LTR54	LTR/ERV1	293	510	(0)	3579468
2573	5.3	0.3	0.3	chr7	14002774	14003073	(145342900)	C	AluY	SINE/Alu	(11)	300	1	3579470
2337	8.9	0.0	2.5	chr7	14003098	14003413	(145342560)	C	AluY	SINE/Alu	(3)	308	1	3579471
180	37.3	5.2	0.9	chr7	15407969	15408079	(143937894)	C	L2a	LINE/L2	(164)	3223	3108	3581221
530	32.6	5.6	3.3	chr7	16265728	16265971	(143080002)	C	MIR	SINE/MIR	(11)	251	2	3582261
2800	17.8	3.2	12.9	chr7	16419266	16420033	(142925940)	+	LTR8	LTR/ERV1	1	691	(0)	3582433
13	21.9	2.3	2.2	chr7	16646094	16646137	(142699836)	+	G-rich	Low_complexity	1	45	(0)	3582782
32	3.0	0.0	0.0	chr7	16646203	16646236	(142699737)	+	(CTG)n	Simple_repeat	1	34	(0)	3582783
700	31.9	7.2	5.6	chr7	20219895	20220355	(139125618)	+	MLT1N2	LTR/ERVL-MaLR	93	561	(1)	3587458
14	11.7	0.0	3.3	chr7	20786969	20786998	(138558975)	+	(GCCGC)n	Simple_repeat	1	30	(0)	3588263
15	15.9	2.9	0.0	chr7	20787033	20787067	(138558906)	+	G-rich	Low_complexity	1	36	(0)	3588264
3730	13.5	3.4	0.5	chr7	22179496	22180104	(137165869)	+	MER41B	LTR/ERV1	1	627	(7)	3590294
12	11.6	3.3	3.2	chr7	22351121	22351150	(136994823)	+	(TGTTT)n	Simple_repeat	1	31	(0)	3590519
307	18.0	0.0	0.0	chr7	22351160	22351209	(136994764)	C	AluJr4	SINE/Alu	(187)	125	76	3590520
1760	10.8	10.7	0.0	chr7	22667241	22667498	(136678475)	C	AluSg	SINE/Alu	(16)	294	6	3591023
273	26.8	5.6	6.8	chr7	22682180	22682415	(136663558)	C	L2c	LINE/L2	(954)	2465	2233	3591050
18	0.0	0.0	0.0	chr7	23105519	23105538	(136240435)	+	(A)n	Simple_repeat	1	20	(0)	3591731
561	36.1	6.3	0.6	chr7	24778581	24778923	(134567050)	C	MLT1J	LTR/ERVL-MaLR	(148)	364	1	3594372
258	31.2	10.0	5.9	chr7	24778959	24779244	(134566729)	+	MLT1M	LTR/ERVL-MaLR	66	364	(308)	3594373
1009	25.0	12.6	6.7	chr7	25927593	25928068	(133417905)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	1	3596125
1931	15.6	0.3	0.3	chr7	26180995	26181276	(133164697)	C	AluJb	SINE/Alu	(30)	282	1	3596571
369	19.8	18.6	0.9	chr7	26187402	26187507	(133158466)	C	FRAM	SINE/Alu	(47)	129	1	3596577
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
1249	16.8	2.3	0.5	chr7	26233830	26234044	(133111929)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3596658
4293	5.9	1.6	0.0	chr7	28825961	28826505	(130519468)	+	MER41A	LTR/ERV1	1	554	(0)	3600626
3982	7.2	6.3	0.0	chr7	29794679	29795195	(129550778)	C	MER41A	LTR/ERV1	(2)	552	1	3602132
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
790	23.4	9.9	0.0	chr7	30727827	30728044	(128617929)	+	L2a	LINE/L2	2805	3046	(373)	3603553
612	23.6	15.3	9.5	chr7	30728047	30728137	(128617836)	+	LTR16A1	LTR/ERVL	96	164	(292)	3603554
4138	8.1	0.0	1.9	chr7	30728138	30728702	(128617271)	+	MER41A	LTR/ERV1	1	554	(0)	3603555
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
4644	10.4	1.3	0.5	chr7	36217012	36217640	(123128333)	C	MER41B	LTR/ERV1	(0)	634	1	3611924
363	31.4	6.5	5.8	chr7	37974282	37974524	(121371449)	C	MIRb	SINE/MIR	(6)	262	18	3614489
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
208	33.0	4.9	0.0	chr7	38178407	38178503	(121167470)	C	MIRc	SINE/MIR	(82)	186	85	3614740
4667	4.1	0.4	0.2	chr7	38332243	38332799	(121013174)	+	LTR6B	LTR/ERV1	1	558	(0)	3614963
614	30.1	1.2	0.6	chr7	40346429	40346592	(118999381)	+	MIR	SINE/MIR	6	170	(92)	3618296
1066	20.4	10.7	7.8	chr7	40346664	40347008	(118998965)	+	MLT1A	LTR/ERVL-MaLR	19	374	(0)	3618297
910	22.9	13.7	2.0	chr7	40546945	40547406	(118798567)	C	MLT2B4	LTR/ERVL	(0)	556	1	3618619
50	3.7	1.8	0.0	chr7	40624773	40624827	(118721146)	+	(AC)n	Simple_repeat	1	56	(0)	3618747
318	18.0	6.5	4.8	chr7	40624830	40624934	(118721039)	+	Charlie15a	DNA/hAT-Charlie	118	224	(0)	3618748
1089	27.3	9.9	6.5	chr7	40624997	40625679	(118720294)	C	LTR85b	LTR/Gypsy?	(0)	784	74	3618749
4156	11.7	4.4	0.2	chr7	41750625	41751231	(117594742)	C	MER41B	LTR/ERV1	(0)	634	1	3620286
1383	19.9	18.9	1.9	chr7	41751232	41751582	(117594391)	C	LTR8B	LTR/ERV1	(407)	413	2	3620282
296	17.6	10.2	14.9	chr7	44618639	44618772	(114727201)	+	MER21A	LTR/ERVL	72	198	(733)	3624547
1716	17.5	1.7	0.0	chr7	44618709	44618999	(114726974)	+	MER39	LTR/ERV1	219	514	(193)	3624548
2674	20.2	10.7	6.2	chr7	44618794	44619481	(114726492)	+	MER21A	LTR/ERVL	179	900	(31)	3624547
50	22.4	4.0	6.6	chr7	44885267	44885513	(114460460)	+	(CGC)n	Simple_repeat	1	257	(0)	3625085
2062	21.3	4.8	8.5	chr7	46461134	46461772	(112884201)	C	MER61E	LTR/ERV1	(0)	779	86	3627270
61	25.3	0.7	0.0	chr7	50356449	50356597	(108989376)	+	(TG)n	Simple_repeat	1	150	(0)	3632278
2003	16.2	0.0	0.3	chr7	50358978	50359285	(108986688)	+	AluJb	SINE/Alu	1	307	(5)	3632283
32	5.3	0.0	0.0	chr7	50450392	50450430	(108895543)	+	(CGTG)n	Simple_repeat	1	39	(0)	3632383
12	18.4	5.4	0.0	chr7	50450432	50450468	(108895505)	+	G-rich	Low_complexity	1	39	(0)	3632384
2145	11.7	3.9	0.0	chr7	50535147	50535445	(108810528)	C	AluSq2	SINE/Alu	(1)	312	2	3632492
3501	8.1	5.6	5.0	chr7	54743397	54743622	(104602351)	+	MER4-int	LTR/ERV1	2271	2495	(4103)	3637737
1032	17.2	9.7	0.4	chr7	54743623	54743855	(104602118)	C	LTR8	LTR/ERV1	(434)	257	1	3637742
1659	9.1	1.6	0.7	chr7	54743856	54744155	(104601818)	+	MER4-int	LTR/ERV1	2737	3039	(3559)	3637737
2902	14.3	7.2	6.8	chr7	64999344	64999936	(94346037)	C	LTR4	LTR/ERV1	(0)	596	1	3647034
1107	14.5	0.0	0.0	chr7	66592458	66592623	(92753350)	+	AluSx	SINE/Alu	146	311	(1)	3650350
17	4.9	0.0	0.0	chr7	66628734	66628754	(92717219)	+	(C)n	Simple_repeat	1	21	(0)	3650448
13	24.4	3.5	3.4	chr7	66628916	66628972	(92717001)	+	(CCGC)n	Simple_repeat	1	59	(0)	3650449
43	31.3	2.8	5.0	chr7	66920826	66921080	(92424893)	+	(CA)n	Simple_repeat	1	262	(0)	3651108
12	15.8	0.0	3.3	chr7	66921065	66921094	(92424879)	+	(CACG)n	Simple_repeat	1	30	(0)	3651109
4075	12.1	4.4	1.3	chr7	67360053	67360307	(91985666)	+	MER41B	LTR/ERV1	1	261	(373)	3652038
4182	10.7	2.1	5.8	chr7	71989964	71990467	(87355506)	+	MER41B	LTR/ERV1	7	510	(124)	3661388
1017	13.8	0.0	6.9	chr7	72038374	72038510	(87307463)	C	AluJr4	SINE/Alu	(10)	302	172	3661481
4412	7.6	0.2	0.0	chr7	72038511	72039063	(87306910)	+	MER41A	LTR/ERV1	1	554	(0)	3661482
14	21.7	0.0	8.1	chr7	73557165	73557226	(85788747)	+	G-rich	Low_complexity	1	62	(0)	3664903
2156	10.7	0.0	3.6	chr7	73562251	73562558	(85783415)	+	AluSc	SINE/Alu	1	297	(12)	3664917
889	26.7	3.3	4.1	chr7	73562559	73562677	(85783296)	+	L2a	LINE/L2	3143	3249	(177)	3664916
2063	14.7	1.0	0.3	chr7	73885809	73886115	(85459858)	+	AluJr	SINE/Alu	1	309	(3)	3665709
806	19.4	2.2	5.3	chr7	73886116	73886239	(85459734)	C	MER5A	DNA/hAT-Charlie	(56)	133	6	3665708
194	22.7	0.0	4.3	chr7	73886247	73886292	(85459681)	+	UCON132b	DNA/hAT-Tip100	103	146	(2)	3665710
4322	9.3	0.9	3.1	chr7	74160039	74160487	(85185486)	+	MER41B	LTR/ERV1	1	453	(181)	3666363
1097	18.8	0.5	0.0	chr7	74279824	74280025	(85065948)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	3666661
4630	14.1	7.0	1.8	chr7	74452255	74452948	(84893025)	C	LTR8B	LTR/ERV1	(75)	745	4	3667130
200	34.7	8.2	6.2	chr7	75734782	75734959	(83611014)	+	L2c	LINE/L2	3040	3221	(166)	3670380
2093	9.8	0.3	5.8	chr7	75801499	75801825	(83544148)	+	AluSp	SINE/Alu	1	309	(4)	3670569
4069	12.2	0.2	4.6	chr7	75801862	75802051	(83543922)	+	MER41B	LTR/ERV1	1	186	(448)	3670570
2127	9.6	0.7	2.3	chr7	75802052	75802354	(83543619)	+	AluSx	SINE/Alu	1	298	(14)	3670571
3187	10.3	7.3	4.2	chr7	75843391	75843894	(83502079)	C	MER41C	LTR/ERV1	(0)	521	1	3670696
2584	15.2	3.2	1.4	chr7	75843895	75844028	(83501945)	C	LTR47B	LTR/ERVL	(297)	146	1	3670695
316	24.4	4.7	1.2	chr7	75879997	75880079	(83465894)	C	MIR	SINE/MIR	(59)	203	118	3670808
413	30.1	12.5	5.8	chr7	75880178	75880438	(83465535)	C	Tigger19b	DNA/TcMar-Tigger	(60)	490	210	3670809
23	27.0	3.6	0.0	chr7	76358916	76359003	(82986970)	+	(GCGGCT)n	Simple_repeat	1	91	(0)	3671939
13	20.1	2.0	5.8	chr7	76359060	76359110	(82986863)	+	(CCCG)n	Simple_repeat	1	52	(0)	3671940
13	25.0	2.0	2.0	chr7	76397687	76397735	(82948238)	+	(CCCGCAG)n	Simple_repeat	1	50	(0)	3672048
4079	13.7	0.8	0.2	chr7	84821526	84822155	(74523818)	C	MER41B	LTR/ERV1	(0)	634	1	3684024
2928	17.7	0.2	6.0	chr7	84822156	84822504	(74523469)	+	L1MC3	LINE/L1	7370	7701	(84)	3684022
8455	6.7	15.8	1.6	chr7	84880388	84881736	(74464237)	+	LTR12C	LTR/ERV1	3	1579	(0)	3684104
3778	9.7	2.9	0.7	chr7	84913063	84913604	(74432369)	+	MER41A	LTR/ERV1	1	554	(0)	3684141
375	23.4	1.8	6.7	chr7	87140319	87140437	(72205536)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	399	3686846
4477	9.3	1.4	0.2	chr7	87330749	87331310	(72014663)	C	MER61E	LTR/ERV1	(0)	569	1	3687051
205	32.2	5.2	14.2	chr7	87574503	87574734	(71771239)	+	L2c	LINE/L2	2933	3142	(245)	3687387
193	30.2	3.4	8.5	chr7	87574825	87574918	(71771055)	+	L2c	LINE/L2	3254	3342	(45)	3687387
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
1264	20.7	13.9	4.4	chr7	88683112	88683389	(70662584)	C	LTR54B	LTR/ERV1	(178)	320	2	3688849
15	13.6	0.0	5.6	chr7	91264241	91264276	(68081697)	+	(TCC)n	Simple_repeat	1	36	(0)	3692226
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
4207	12.9	0.6	1.9	chr7	94157450	94158091	(65187882)	C	MER41B	LTR/ERV1	(0)	634	1	3696236
581	30.0	4.2	4.9	chr7	94158092	94158145	(65187828)	C	L2	LINE/L2	(1108)	2311	2258	3696235
13758	1.9	0.0	0.1	chr7	94158150	94160538	(65185435)	+	L1PA3	LINE/L1	3769	6155	(0)	3696237
10342	12.1	4.3	2.1	chr7	97125454	97127258	(62218715)	C	L1PA8	LINE/L1	(4627)	1843	6	3700305
3297	7.2	2.3	2.5	chr7	99471161	99471603	(59874370)	+	L1PA8A	LINE/L1	5688	6129	(2)	3704800
2035	5.2	1.5	3.4	chr7	99471610	99471877	(59874096)	+	AluSx1	SINE/Alu	39	301	(11)	3704801
3272	10.9	1.4	1.4	chr7	99833185	99833666	(59512307)	C	LTR15	LTR/ERV1	(11)	482	1	3705357
18141	9.4	0.2	0.4	chr7	99833671	99836055	(59509918)	C	HERV15-int	LTR/ERV1	(5)	8730	6349	3705357
6958	11.7	1.6	2.2	chr7	100344758	100345770	(59000203)	C	LTR13	LTR/ERVK	(0)	1007	1	3706402
325	31.2	4.6	0.8	chr7	100444415	100444540	(58901433)	+	MIR	SINE/MIR	44	174	(88)	3706592
2517	6.7	0.0	0.0	chr7	100451081	100451378	(58894595)	+	AluSx	SINE/Alu	4	301	(11)	3706612
45	2.3	0.0	0.0	chr7	100673816	100673860	(58672113)	+	(CGC)n	Simple_repeat	1	45	(0)	3707120
1404	19.6	14.0	1.9	chr7	101081331	101081761	(58264212)	C	LTR54B	LTR/ERV1	(2)	496	5	3707951
2213	13.2	0.0	0.0	chr7	101081767	101082070	(58263903)	C	AluSx	SINE/Alu	(0)	312	9	3707952
26	8.1	0.0	4.7	chr7	101126906	101126948	(58219025)	+	(AC)n	Simple_repeat	1	43	(0)	3708051
725	7.1	4.0	1.0	chr7	101138804	101138901	(58207072)	+	AluJo	SINE/Alu	24	124	(188)	3708076
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
27	0.0	0.0	0.0	chr7	101165787	101165812	(58180161)	+	(AATG)n	Simple_repeat	1	26	(0)	3708141
195	32.5	5.7	0.0	chr7	103025438	103025520	(56320453)	C	MIR3	SINE/MIR	(11)	197	110	3712092
23	36.3	2.9	0.0	chr7	103025713	103025815	(56320158)	+	(AT)n	Simple_repeat	1	106	(0)	3712093
251	31.0	14.7	1.5	chr7	103915864	103916063	(55429910)	+	L3b	LINE/CR1	4918	5148	(84)	3713337
835	27.6	8.7	3.1	chr7	103995599	103996117	(55349856)	C	L1ME3A	LINE/L1	(7)	6166	5616	3713473
308	28.2	6.5	8.6	chr7	103996121	103996341	(55349632)	+	L1MEd	LINE/L1	90	305	(6781)	3713474
682	23.6	5.8	1.0	chr7	103996353	103996549	(55349424)	+	MER5C1	DNA/hAT-Charlie	2	208	(55)	3713475
2691	8.8	0.6	0.0	chr7	104963815	104964157	(54381816)	C	LTR18C	LTR/ERVL	(0)	345	1	3714919
2627	5.3	0.0	0.0	chr7	105399998	105400301	(53945672)	+	AluY	SINE/Alu	1	304	(7)	3715730
511	19.1	13.5	0.0	chr7	106018835	106018975	(53326998)	C	MER5A1	DNA/hAT-Charlie	(3)	163	1	3716967
2049	15.2	11.2	0.8	chr7	106183807	106184204	(53161769)	C	MER65A	LTR/ERV1	(0)	445	1	3717247
2574	23.6	5.1	4.5	chr7	106184205	106184998	(53160975)	C	L1ME1	LINE/L1	(726)	5453	4646	3717245
312	27.9	9.8	7.3	chr7	106285214	106285391	(53060582)	C	L1M4b	LINE/L1	(6487)	380	198	3717380
7380	21.9	5.0	4.1	chr7	106346363	106347493	(52998480)	+	Charlie6	DNA/hAT-Charlie	871	2005	(1495)	3717452
1160	26.6	10.3	2.2	chr7	106543381	106543791	(52802182)	C	L2a	LINE/L2	(42)	3384	2937	3717731
1228	23.4	1.8	2.0	chr7	106563284	106563610	(52782363)	+	L1MC4a	LINE/L1	7079	7411	(471)	3717752
3059	5.4	5.0	9.8	chr7	106567353	106567841	(52778132)	+	LTR7B	LTR/ERV1	1	464	(0)	3717758
745	29.4	12.2	4.0	chr7	106567842	106568056	(52777917)	C	L1ME3G	LINE/L1	(665)	259	17	3717757
2756	7.5	15.7	0.7	chr7	106569510	106569937	(52776036)	+	LTR10F	LTR/ERV1	1	504	(7)	3717761
569	23.6	7.8	5.3	chr7	106598615	106598802	(52747171)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	320	3717814
553	15.7	4.2	0.0	chr7	106598920	106599041	(52746932)	C	MLT1J	LTR/ERVL-MaLR	(407)	155	20	3717814
12	23.8	3.9	1.9	chr7	106660827	106660877	(52685096)	+	(CGCCGC)n	Simple_repeat	1	53	(0)	3717897
2689	11.4	4.9	2.0	chr7	106756934	106757327	(52588646)	C	MER48	LTR/ERV1	(1)	406	1	3718018
4539	18.0	4.0	0.7	chr7	106757328	106757607	(52588366)	C	L1MB2	LINE/L1	(1493)	4647	4348	3718012
4320	10.9	4.0	3.0	chr7	106767153	106767852	(52578121)	C	LTR62	LTR/ERVL	(2)	707	1	3718033
296	34.9	11.4	2.7	chr7	106767859	106767985	(52577988)	C	MIRc	SINE/MIR	(20)	248	97	3718034
2254	14.0	6.2	0.3	chr7	106767986	106768364	(52577609)	+	MER57B2	LTR/ERV1	1	403	(0)	3718035
4321	9.3	1.3	2.8	chr7	106774627	106775270	(52570703)	C	MER41B	LTR/ERV1	(0)	634	1	3718049
4031	9.6	2.5	0.2	chr7	106796527	106796945	(52549028)	C	MER41A	LTR/ERV1	(130)	424	1	3718093
13041	9.0	2.6	0.9	chr7	106796946	106798625	(52547348)	C	MER41-int	LTR/ERV1	(2)	5944	4225	3718093
376	28.3	11.5	4.7	chr7	106810352	106810510	(52535463)	C	MIRc	SINE/MIR	(44)	224	46	3718109
1213	26.0	10.3	0.7	chr7	106810511	106810920	(52535053)	C	LTR16A1	LTR/ERVL	(2)	454	1	3718110
2641	6.8	0.0	3.4	chr7	107009151	107009472	(52336501)	+	AluY	SINE/Alu	1	311	(0)	3718438
2218	10.3	5.1	0.0	chr7	107010443	107010723	(52335250)	C	AluSz	SINE/Alu	(11)	301	6	3718439
1222	19.2	7.8	8.9	chr7	107318541	107318888	(52027085)	C	MLT1B	LTR/ERVL-MaLR	(46)	344	1	3718911
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
380	34.4	2.0	9.5	chr7	107842973	107843351	(51502622)	C	L2b	LINE/L2	(2)	3373	3024	3719695
13	16.2	0.0	0.0	chr7	108526157	108526184	(50819789)	+	(CCCGC)n	Simple_repeat	1	28	(0)	3720663
14017	8.8	1.7	2.5	chr7	112591346	112592857	(46753116)	+	L1PA10	LINE/L1	4271	5756	(1825)	3726046
618	32.5	6.0	4.0	chr7	112592893	112592911	(46753062)	C	L1M5	LINE/L1	(2170)	3976	3959	3726043
2626	11.7	0.2	18.0	chr7	112592912	112593462	(46752511)	+	MLT2A2	LTR/ERVL	1	453	(0)	3726049
2594	17.9	3.1	1.4	chr7	116876678	116877187	(42468786)	C	LTR53	LTR/ERVL	(0)	519	1	3731689
11	24.1	2.6	0.0	chr7	117020253	117020291	(42325682)	+	(TCCTGC)n	Simple_repeat	1	40	(0)	3731967
22	3.9	0.0	0.0	chr7	120950749	120950775	(38395198)	+	(T)n	Simple_repeat	1	27	(0)	3737033
219	30.3	4.4	10.7	chr7	120985496	120985617	(38360356)	C	MIR3	SINE/MIR	(6)	202	89	3737072
4279	19.8	2.2	1.4	chr7	121038602	121039507	(38306466)	C	L1MC3	LINE/L1	(172)	7613	6701	3737147
310	10.9	0.0	0.0	chr7	121160129	121160183	(38185790)	C	L1MA3	LINE/L1	(0)	6305	6251	3737318
25	13.3	0.0	5.4	chr7	121160203	121160258	(38185715)	+	(CATTA)n	Simple_repeat	1	56	(0)	3737319
1865	8.9	0.4	0.0	chr7	123499753	123500000	(35845973)	+	MER41A	LTR/ERV1	1	249	(305)	3740507
721	25.3	14.4	1.9	chr7	123556710	123557023	(35788950)	C	L2	LINE/L2	(1319)	2100	1741	3740597
914	20.5	3.2	2.3	chr7	123789924	123790138	(35555835)	C	MLT2D	LTR/ERVL	(48)	366	150	3740972
238	13.5	0.0	0.0	chr7	123790136	123790172	(35555801)	C	MLT2D	LTR/ERVL	(476)	39	3	3740972
492	30.7	8.5	3.0	chr7	123790234	123790465	(35555508)	C	MIRc	SINE/MIR	(12)	256	11	3740975
4081	15.5	0.2	0.9	chr7	123992703	123993160	(35352813)	C	MER41B	LTR/ERV1	(179)	455	1	3741258
21382	15.2	3.4	1.2	chr7	124379192	124384425	(34961548)	+	L1M1	LINE/L1	16	5367	(2198)	3741774
2189	11.5	0.0	1.4	chr7	124941774	124942069	(34403904)	C	AluSx3	SINE/Alu	(13)	298	7	3742520
5057	6.9	2.5	2.0	chr7	124942070	124942322	(34403651)	C	LTR8	LTR/ERV1	(426)	265	5	3742519
18272	2.4	0.0	0.0	chr7	125179571	125181978	(34163995)	C	L1HS	LINE/L1	(3613)	2533	125	3742818
18	23.0	8.5	3.1	chr7	127392851	127392968	(31953005)	+	(GCCGAGG)n	Simple_repeat	1	128	(0)	3745668
20	25.5	1.1	6.3	chr7	127588308	127588401	(31757572)	+	G-rich	Low_complexity	1	95	(0)	3745955
15	27.6	4.6	0.0	chr7	127588434	127588498	(31757475)	+	(CCCGCG)n	Simple_repeat	1	68	(0)	3745956
11	25.3	0.0	4.3	chr7	127588585	127588630	(31757343)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3745957
616	21.7	9.3	2.4	chr7	128237091	128237260	(31108713)	+	MLT1H2	LTR/ERVL-MaLR	60	242	(247)	3746854
398	16.5	3.2	2.1	chr7	128237307	128237399	(31108574)	+	MLT1H2	LTR/ERVL-MaLR	437	530	(19)	3746854
419	10.0	1.6	0.0	chr7	128344082	128344141	(31001832)	+	U7	snRNA	2	62	(1)	3747039
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
195	35.9	0.0	2.1	chr7	128862460	128862553	(30483420)	C	L2c	LINE/L2	(0)	3387	3296	3748066
19	19.3	0.0	0.0	chr7	128862618	128862659	(30483314)	+	(TGAA)n	Simple_repeat	1	42	(0)	3748067
677	27.3	11.0	0.3	chr7	129150501	129150729	(30195244)	+	MIRb	SINE/MIR	1	257	(11)	3748600
550	19.0	11.6	7.7	chr7	131108678	131108859	(28237114)	C	UCON29	DNA/PiggyBac?	(237)	202	13	3752137
308	25.4	6.0	13.5	chr7	132489551	132489750	(26856223)	C	MIR3	SINE/MIR	(24)	184	1	3754465
14	12.7	0.0	0.0	chr7	132489772	132489797	(26856176)	+	(CAT)n	Simple_repeat	1	26	(0)	3754466
506	34.0	13.1	3.0	chr7	133805475	133805774	(25540199)	C	L2c	LINE/L2	(63)	3324	2990	3756505
1929	25.0	13.5	1.0	chr7	134083373	134083857	(25262116)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	3756925
4842	8.6	1.5	0.3	chr7	134194836	134195510	(25150463)	C	LTR8	LTR/ERV1	(8)	683	1	3757107
538	19.3	2.6	1.7	chr7	134195539	134195654	(25150319)	C	MLT2C2	LTR/ERVL	(355)	201	85	3757105
26	0.0	0.0	0.0	chr7	134646898	134646922	(24699051)	+	(GCT)n	Simple_repeat	1	25	(0)	3757795
323	21.7	7.3	0.9	chr7	135160165	135160280	(24185693)	+	L1ME4a	LINE/L1	5997	6120	(4)	3758527
1927	21.9	4.3	1.5	chr7	135661509	135661981	(23683992)	+	LTR31	LTR/ERV1	115	601	(18)	3759373
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
1317	28.8	8.0	3.3	chr7	135908999	135909424	(23436549)	C	HAL1	LINE/L1	(1703)	804	347	3759799
4656	7.4	0.2	0.2	chr7	135909425	135909978	(23435995)	+	MER41A	LTR/ERV1	1	554	(0)	3759806
192	34.2	0.9	0.4	chr7	137962968	137963076	(21382897)	C	L3b	LINE/CR1	(817)	4415	4359	3762656
296	30.7	18.1	0.0	chr7	137963259	137963421	(21382552)	C	L3b	LINE/CR1	(1232)	2867	2669	3762656
1550	18.8	3.5	14.2	chr7	137966880	137967300	(21378673)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3762663
274	34.5	0.9	3.4	chr7	137986407	137986523	(21359450)	+	Charlie17a	DNA/hAT-Charlie	81	194	(23)	3762699
2144	21.5	5.5	7.8	chr7	138223473	138224091	(21121882)	+	MER61E	LTR/ERV1	92	779	(0)	3763153
2074	11.8	0.0	5.1	chr7	138257090	138257402	(21088571)	+	AluY	SINE/Alu	1	297	(14)	3763229
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
4102	9.7	1.4	2.5	chr7	138431304	138431874	(20914099)	C	MER61E	LTR/ERV1	(4)	565	1	3763623
602	25.1	4.2	1.2	chr7	139043940	139044100	(20301873)	+	MER20B	DNA/hAT-Charlie	57	222	(561)	3764800
2086	5.2	10.3	0.0	chr7	139091218	139091486	(20254487)	+	AluY	SINE/Alu	1	300	(11)	3764898
4871	2.9	0.0	0.2	chr7	139091867	139092425	(20253548)	C	LTR6B	LTR/ERV1	(0)	558	1	3764901
1715	22.8	5.4	0.2	chr7	139118775	139119192	(20226781)	+	MLT1F	LTR/ERVL-MaLR	1	441	(107)	3764957
367	23.0	16.9	0.0	chr7	139119278	139119390	(20226583)	C	MIRb	SINE/MIR	(97)	171	36	3764958
2205	19.0	11.1	9.6	chr7	139183697	139183950	(20162023)	+	L1MD2	LINE/L1	5964	6214	(536)	3765063
2068	16.8	2.9	1.9	chr7	139183951	139184364	(20161609)	+	LTR52	LTR/ERVL	1	418	(3)	3765064
2202	8.4	2.4	0.0	chr7	139358696	139358979	(19986994)	C	AluSx1	SINE/Alu	(20)	292	2	3765422
2631	5.9	0.6	0.0	chr7	140486589	140486908	(18859065)	C	LTR8	LTR/ERV1	(369)	322	1	3767562
1635	14.3	0.0	0.0	chr7	140486912	140487163	(18858810)	+	AluSx	SINE/Alu	58	309	(3)	3767561
270	21.5	7.0	9.7	chr7	141003934	141004018	(18341955)	+	L2b	LINE/L2	3277	3411	(15)	3768610
2396	9.3	1.4	0.0	chr7	141004019	141004308	(18341665)	+	AluY	SINE/Alu	1	294	(17)	3768611
53	3.8	0.0	0.0	chr7	142610182	142610235	(16735738)	+	(AC)n	Simple_repeat	1	54	(0)	3770800
3817	10.5	2.0	0.2	chr7	142703799	142704340	(16641633)	+	MER41A	LTR/ERV1	3	554	(0)	3770921
4994	16.7	1.1	0.9	chr7	143256455	143257245	(16088728)	C	MER54B	LTR/ERVL	(0)	793	1	3771636
1432	14.5	6.9	1.7	chr7	143257246	143257525	(16088448)	+	L1MA7	LINE/L1	7412	7708	(2)	3771629
378	35.1	11.3	3.5	chr7	143370222	143370360	(15975613)	+	L2b	LINE/L2	1858	2005	(1414)	3771820
3628	10.4	2.7	1.1	chr7	143370361	143370905	(15975068)	+	MER41A	LTR/ERV1	1	554	(0)	3771821
2632	6.8	0.0	0.0	chr7	149066212	149066519	(10279454)	+	AluSx	SINE/Alu	1	308	(4)	3779939
1291	25.8	8.0	0.5	chr7	149718996	149719389	(9626584)	C	MLT1C	LTR/ERVL-MaLR	(35)	432	7	3781092
254	26.0	8.3	0.0	chr7	150312680	150312756	(9033217)	+	HERVH-int	LTR/ERV1	7568	7651	(62)	3781853
3759	7.5	0.2	0.0	chr7	150312817	150313286	(9032687)	+	LTR7C	LTR/ERV1	1	471	(0)	3781854
1756	21.9	3.2	1.2	chr7	150317854	150318256	(9027717)	C	MER90a	LTR/ERV1	(21)	593	183	3781866
942	23.1	4.8	0.5	chr7	150318254	150318453	(9027520)	+	MLT1C	LTR/ERVL-MaLR	257	465	(2)	3781867
1099	24.4	12.8	9.6	chr7	150320786	150320928	(9025045)	C	MER41C	LTR/ERV1	(359)	162	2	3781876
1563	18.7	17.9	0.5	chr7	150320955	150321336	(9024637)	+	MER31B	LTR/ERV1	1	463	(3)	3781878
4381	10.9	3.0	0.7	chr7	150322212	150322830	(9023143)	+	MER41B	LTR/ERV1	1	634	(0)	3781881
644	13.2	4.0	1.8	chr7	150355648	150355779	(8990194)	C	MER57-int	LTR/ERV1	(42)	7495	7388	3781931
445	18.2	11.0	4.3	chr7	150355780	150355940	(8990033)	C	LTR54B	LTR/ERV1	(303)	195	23	3781932
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
670	25.2	5.2	0.5	chr7	150406479	150406681	(8939292)	+	MIRc	SINE/MIR	5	217	(51)	3782014
447	8.0	2.6	3.9	chr7	150960291	150960368	(8385605)	C	L1MA5A	LINE/L1	(0)	6297	6221	3782708
627	33.5	1.6	7.0	chr7	150960369	150960472	(8385501)	+	MIR	SINE/MIR	173	262	(0)	3782707
466	24.7	15.7	0.0	chr7	150960522	150960687	(8385286)	+	MER5C1	DNA/hAT-Charlie	67	263	(0)	3782709
2226	12.8	0.0	0.7	chr7	150961295	150961599	(8384374)	C	AluSz	SINE/Alu	(9)	303	1	3782710
6554	9.3	4.1	2.9	chr7	151027014	151027969	(8318004)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3782808
1962	9.3	8.0	0.7	chr7	151029042	151029319	(8316654)	+	AluSz6	SINE/Alu	1	300	(12)	3782809
1762	19.3	3.9	2.4	chr7	151349757	151349775	(7996198)	+	L1MB7	LINE/L1	5649	5667	(517)	3783296
6576	11.8	3.0	2.1	chr7	151349776	151350771	(7995202)	C	LTR13	LTR/ERVK	(2)	1005	1	3783297
748	27.3	8.8	2.5	chr7	151925757	151926041	(7419932)	C	L3	LINE/CR1	(1597)	2502	2198	3784260
330	28.9	4.2	8.1	chr7	151926052	151926175	(7419798)	+	MIRb	SINE/MIR	18	136	(132)	3784262
694	26.8	11.9	6.8	chr7	151926204	151926681	(7419292)	+	MLT1H1	LTR/ERVL-MaLR	51	555	(0)	3784263
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
5392	14.0	9.6	3.8	chr7	152350377	152351514	(6994459)	C	Tigger3b	DNA/TcMar-Tigger	(20)	1211	1	3784924
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
13	19.5	0.0	2.7	chr7	152759662	152759698	(6586275)	+	G-rich	Low_complexity	1	37	(0)	3785945
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
414	28.4	3.4	1.4	chr7	154817198	154817340	(4528633)	+	MER117	DNA/hAT-Charlie	1	146	(51)	3788775
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
2088	16.9	3.1	0.5	chr7	155206545	155206954	(4139019)	C	MSTB	LTR/ERVL-MaLR	(4)	422	2	3789352
401	26.3	3.3	0.0	chr7	155324002	155324119	(4021854)	+	MER94	DNA/hAT-Blackjack	2	123	(11)	3789511
424	32.4	6.5	6.3	chr7	156402000	156402441	(2943532)	C	LTR81A	LTR/Gypsy	(314)	875	433	3790855
21	21.2	0.0	4.6	chr7	156893190	156893254	(2452719)	+	G-rich	Low_complexity	1	65	(0)	3791500
13	26.4	1.9	1.9	chr7	156893315	156893366	(2452607)	+	G-rich	Low_complexity	1	53	(0)	3791500
12	17.6	0.0	5.6	chr7	157010779	157010814	(2335159)	+	(CCGCC)n	Simple_repeat	1	36	(0)	3791706
223	23.0	20.4	0.0	chr7	157398193	157398266	(1947707)	+	L2c	LINE/L2	3289	3381	(6)	3792435
2228	10.5	0.0	0.3	chr7	158618094	158618387	(727586)	+	AluSx	SINE/Alu	9	301	(11)	3793446
3887	16.0	3.6	1.6	chr7	158618552	158619277	(726696)	+	L1MB3	LINE/L1	5442	6182	(1)	3793447
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
2036	19.1	14.7	0.9	chr7	158860952	158861491	(484482)	+	MER67B	LTR/ERV1	2	628	(33)	3793809
5411	7.1	10.9	1.6	chr7	158862679	158863424	(482549)	C	LTR12	LTR/ERV1	(0)	826	3	3793812
1577	15.5	3.2	3.6	chr7	158863425	158863466	(482507)	+	AluJr	SINE/Alu	238	277	(35)	3793811
375	21.6	5.8	1.0	chr7	158864156	158864253	(481720)	C	LTR56	LTR/ERV1	(342)	103	1	3793810
7628	12.1	5.6	2.4	chr7	158975901	158977135	(368838)	+	MER52C	LTR/ERV1	1	1276	(2)	3793978
1229	20.7	5.7	2.8	chr7	158977136	158977349	(368624)	+	L1MC1	LINE/L1	6102	6324	(9)	3793977
196	27.7	9.8	7.5	chr7	159197235	159197394	(148579)	+	L2b	LINE/L2	3028	3191	(184)	3794189
306	34.4	6.8	3.5	chr8	1760112	1760310	(143378326)	+	MIR	SINE/MIR	53	258	(4)	3796053
2363	16.3	16.7	3.9	chr8	2733496	2734158	(142404478)	C	LTR60B	LTR/ERV1	(0)	765	1	3797229
1464	17.4	4.8	1.0	chr8	6428434	6428735	(138709901)	C	L1MB7	LINE/L1	(87)	6097	5784	3802066
1024	25.5	3.0	11.5	chr8	6428757	6429235	(138709401)	C	HAL1	LINE/L1	(19)	2488	2052	3802067
38	28.8	2.5	3.1	chr8	6745948	6746104	(138392532)	+	(TTCT)n	Simple_repeat	1	161	(0)	3802531
261	12.8	4.7	7.5	chr8	6746119	6746186	(138392450)	C	7SLRNA	srpRNA	(275)	45	1	3802532
2798	8.8	5.4	3.0	chr8	8244526	8244922	(136893714)	+	MER48	LTR/ERV1	1	407	(0)	3804390
342	28.6	1.1	0.0	chr8	8680448	8680538	(136458098)	+	MIR	SINE/MIR	56	147	(115)	3805143
2234	13.5	0.3	0.0	chr8	8777339	8777649	(136360987)	C	AluSx1	SINE/Alu	(0)	312	1	3805321
1993	14.7	10.3	5.3	chr8	8777650	8777687	(136360949)	+	MSTA	LTR/ERVL-MaLR	395	427	(1)	3805320
4032	14.0	6.4	0.3	chr8	8777730	8778091	(136360545)	+	LTR62	LTR/ERVL	8	402	(307)	3805322
3300	22.0	8.5	1.4	chr8	8861585	8862564	(136276072)	C	L1ME1	LINE/L1	(22)	6157	5093	3805469
13	13.1	0.0	0.0	chr8	9150704	9150728	(135987908)	+	(GGA)n	Simple_repeat	1	25	(0)	3806005
2463	14.6	13.9	0.0	chr8	10027423	10027990	(135110646)	C	MER39B	LTR/ERV1	(0)	653	7	3807469
4813	11.1	0.3	0.6	chr8	10028018	10028653	(135109983)	+	MER41B	LTR/ERV1	1	634	(0)	3807470
240	31.7	5.5	3.5	chr8	10710938	10711081	(134427555)	C	MIRc	SINE/MIR	(102)	166	20	3808519
180	21.3	4.1	2.1	chr8	10711370	10711417	(134427219)	+	MIR3	SINE/MIR	70	118	(90)	3808520
1707	13.2	5.2	1.2	chr8	10711596	10711853	(134426783)	+	AluJb	SINE/Alu	9	277	(35)	3808521
191	31.0	2.2	2.2	chr8	10812605	10812693	(134325943)	C	L3	LINE/CR1	(368)	3731	3643	3808655
368	31.8	2.5	4.3	chr8	11863001	11863030	(133275606)	C	SVA_A	Retroposon/SVA	(1028)	359	333	3810279
710	24.1	1.5	0.0	chr8	11863031	11863163	(133275473)	+	AluJo	SINE/Alu	1	135	(177)	3810280
184	26.7	15.1	1.9	chr8	11879363	11879465	(133259171)	C	L2b	LINE/L2	(31)	3344	3226	3810320
2301	16.0	5.0	0.7	chr8	15582576	15583016	(129555620)	+	MER65C	LTR/ERV1	1	461	(0)	3815608
713	25.6	7.0	12.7	chr8	15701596	15701988	(129436648)	C	MER110	LTR/ERV1	(36)	455	87	3815758
2476	6.9	1.3	0.7	chr8	16497876	16498180	(128640456)	+	AluY	SINE/Alu	3	309	(2)	3816839
4053	18.1	3.9	7.5	chr8	16564874	16565619	(128573017)	+	L1MA7	LINE/L1	5580	6281	(10)	3816935
307	32.3	8.9	11.1	chr8	16565637	16566005	(128572631)	C	L2c	LINE/L2	(508)	2911	2552	3816933
14	0.0	0.0	0.0	chr8	17246694	17246711	(127891925)	+	(CTC)n	Simple_repeat	1	18	(0)	3817918
27	6.1	0.0	0.0	chr8	17246733	17246767	(127891869)	+	(GGCGGT)n	Simple_repeat	1	35	(0)	3817919
13	14.4	2.3	6.7	chr8	20197135	20197178	(124941458)	+	(CTTCC)n	Simple_repeat	1	45	(0)	3822435
3222	14.8	17.1	0.3	chr8	20276169	20276886	(124861750)	+	MER21B	LTR/ERVL	1	844	(24)	3822561
4516	9.6	3.0	0.5	chr8	20276942	20277559	(124861077)	+	MER41B	LTR/ERV1	1	634	(0)	3822562
25	24.4	2.5	1.2	chr8	21919670	21919748	(123218888)	+	(GGC)n	Simple_repeat	1	81	(0)	3825287
602	28.2	5.8	0.5	chr8	22227914	22228109	(122910527)	C	MIRb	SINE/MIR	(23)	245	39	3825793
1469	13.2	8.8	1.1	chr8	22292629	22292998	(122845638)	C	LTR54	LTR/ERV1	(43)	467	3	3825929
60	14.1	3.2	2.3	chr8	22693321	22693446	(122445190)	+	(CCG)n	Simple_repeat	1	130	(0)	3826651
20	15.0	3.6	6.1	chr8	22693671	22693727	(122444909)	+	GA-rich	Low_complexity	1	55	(0)	3826652
447	22.4	12.0	0.0	chr8	22900853	22900999	(122237637)	+	Tigger15a	DNA/TcMar-Tigger	163	329	(386)	3827006
252	29.6	1.4	0.0	chr8	22901030	22901100	(122237536)	+	Tigger15a	DNA/TcMar-Tigger	392	463	(252)	3827007
511	23.2	15.7	3.9	chr8	23360521	23360726	(121777910)	+	MIRb	SINE/MIR	4	238	(30)	3827780
28	6.1	0.0	0.0	chr8	23360739	23360773	(121777863)	+	(TGA)n	Simple_repeat	1	35	(0)	3827781
2339	9.5	0.7	0.0	chr8	23360895	23361198	(121777438)	C	AluSc8	SINE/Alu	(5)	306	1	3827782
20	25.4	4.9	1.2	chr8	23457448	23457528	(121681108)	+	(GCCC)n	Simple_repeat	1	85	(0)	3827940
14	10.6	13.2	1.7	chr8	23494338	23494390	(121644246)	+	(CAGCTGG)n	Simple_repeat	1	60	(0)	3828018
454	28.6	5.3	9.7	chr8	23668493	23668709	(121469927)	+	LTR85b	LTR/Gypsy?	384	590	(194)	3828319
2011	20.5	1.2	2.0	chr8	24222753	24223160	(120915476)	C	LTR53	LTR/ERVL	(0)	519	115	3829147
13	10.4	6.5	0.0	chr8	26382996	26383040	(118755596)	+	G-rich	Low_complexity	1	47	(0)	3832641
502	25.0	3.5	1.4	chr8	27772777	27772918	(117365718)	+	MIR	SINE/MIR	88	232	(30)	3834959
13	22.4	0.0	4.4	chr8	28622291	28622335	(116516301)	+	(CCGGCGC)n	Simple_repeat	1	45	(0)	3836530
3022	16.0	2.4	0.8	chr8	28943136	28943663	(116194973)	C	MER34	LTR/ERV1	(0)	542	6	3837120
4016	13.2	3.2	0.2	chr8	29617240	29617852	(115520784)	+	MER41B	LTR/ERV1	1	632	(2)	3838219
16	5.3	0.0	0.0	chr8	29737563	29737582	(115401054)	+	(AC)n	Simple_repeat	1	20	(0)	3838437
2119	11.3	0.0	0.3	chr8	30082061	30082351	(115056285)	+	AluSx3	SINE/Alu	6	295	(16)	3838997
2721	14.6	10.0	2.7	chr8	30094288	30094807	(115043829)	C	LTR6A	LTR/ERV1	(0)	564	3	3839028
1369	12.2	7.2	10.9	chr8	30094808	30095089	(115043547)	+	AluJb	SINE/Alu	27	297	(15)	3839027
219	35.1	1.2	5.2	chr8	30099785	30099958	(115038678)	C	L2b	LINE/L2	(299)	3076	2910	3839042
461	25.8	2.6	2.6	chr8	30137576	30137591	(115001045)	C	MIRb	SINE/MIR	(58)	210	193	3839129
4106	13.1	3.6	7.6	chr8	30137592	30138312	(115000324)	+	LTR8	LTR/ERV1	1	691	(0)	3839130
1024	15.0	13.8	6.5	chr8	30155847	30155989	(114982647)	C	AluJr	SINE/Alu	(14)	298	137	3839159
31	0.0	0.0	0.0	chr8	30155990	30156018	(114982618)	+	(T)n	Simple_repeat	1	29	(0)	3839160
1024	15.0	13.8	6.5	chr8	30156019	30156121	(114982515)	C	AluJr	SINE/Alu	(177)	135	31	3839159
14	11.6	0.0	3.3	chr8	30156267	30156296	(114982340)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3839161
38836	4.3	0.5	0.8	chr8	30729080	30733679	(114404957)	+	HERVE-int	LTR/ERV1	1	4587	(3226)	3840312
2425	8.1	0.3	0.0	chr8	30743147	30743453	(114395183)	C	AluSg	SINE/Alu	(2)	308	1	3840345
19	19.1	1.3	7.8	chr8	31033715	31033790	(114104846)	+	(GGCGG)n	Simple_repeat	1	77	(0)	3840915
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
2185	13.4	2.0	9.8	chr8	36573737	36574124	(108564512)	C	LTR18A	LTR/ERVL	(0)	357	1	3849085
548	19.6	0.0	0.0	chr8	36574192	36574293	(108564343)	C	HERVL18-int	LTR/ERVL	(0)	6047	5946	3849085
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
734	26.9	2.2	8.8	chr8	37892133	37892417	(107246219)	+	L2a	LINE/L2	2563	2834	(585)	3851155
20	10.4	0.0	0.0	chr8	38150851	38150882	(106987754)	+	(GCT)n	Simple_repeat	1	32	(0)	3851746
15	19.1	4.0	7.6	chr8	38151108	38151183	(106987453)	+	G-rich	Low_complexity	1	79	(0)	3851747
15	27.5	0.0	1.9	chr8	38996645	38996698	(106141938)	+	(TCTGCT)n	Simple_repeat	1	54	(0)	3853348
21	16.2	0.0	4.4	chr8	38996919	38996963	(106141673)	+	(CG)n	Simple_repeat	1	45	(0)	3853349
1462	18.0	11.0	1.2	chr8	41457821	41458157	(103680479)	+	L1MD3	LINE/L1	7346	7719	(276)	3857037
3050	11.3	0.0	0.2	chr8	41458158	41458581	(103680055)	+	MER41B	LTR/ERV1	1	423	(211)	3857038
196	33.3	0.0	0.0	chr8	41798293	41798343	(103340293)	C	MamRTE1	LINE/RTE-BovB	(1501)	2311	2261	3857607
3608	12.4	4.2	0.9	chr8	41818754	41819299	(103319337)	+	MER61E	LTR/ERV1	1	565	(4)	3857650
4245	6.1	1.8	3.4	chr8	42266541	42266989	(102871647)	+	MER41A	LTR/ERV1	1	441	(113)	3858477
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
1583	14.6	3.9	1.4	chr8	43093803	43094077	(102044559)	+	AluJb	SINE/Alu	1	282	(30)	3860104
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
3161	17.1	4.8	14.1	chr8	48466545	48467329	(96671307)	+	LTR62	LTR/ERVL	1	708	(1)	3863348
3654	11.8	2.5	3.0	chr8	49110428	49110995	(96027641)	+	MER61E	LTR/ERV1	1	565	(4)	3864039
1013	18.4	3.5	0.0	chr8	53736584	53736773	(91401863)	+	Harlequin-int	LTR/ERV1	6699	6895	(1)	3869846
2510	15.4	4.3	2.6	chr8	53736774	53737226	(91401410)	+	LTR2	LTR/ERV1	1	461	(2)	3869846
331	20.7	12.6	2.1	chr8	53884538	53884685	(91253951)	C	MIR3	SINE/MIR	(43)	165	5	3870069
4104	12.3	0.3	5.4	chr8	55731576	55732243	(89406393)	C	MER41B	LTR/ERV1	(0)	634	1	3872768
22	0.0	0.0	0.0	chr8	55732298	55732321	(89406315)	+	(AC)n	Simple_repeat	1	24	(0)	3872775
292	38.3	10.0	2.7	chr8	58025058	58025462	(87113174)	C	L2c	LINE/L2	(3)	3384	2947	3876078
2838	14.6	3.4	2.9	chr8	58660525	58661074	(86477562)	C	L1MB8	LINE/L1	(5)	6173	5621	3876893
1282	11.3	10.5	1.6	chr8	58661075	58661308	(86477328)	+	LTR47A	LTR/ERVL	2	259	(193)	3876894
6721	9.8	1.1	0.9	chr8	58671739	58672704	(86465932)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3876921
1785	16.2	0.6	3.4	chr8	58672705	58672812	(86465824)	+	AluJo	SINE/Alu	210	312	(0)	3876920
230	32.3	9.5	0.0	chr8	60237110	60237242	(84901394)	+	MIRc	SINE/MIR	2	148	(120)	3878848
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
2745	12.4	4.7	0.0	chr8	65870083	65870470	(79268166)	+	MER48	LTR/ERV1	1	407	(0)	3886535
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
1087	28.3	13.7	6.0	chr8	67054774	67055502	(78083134)	C	L2a	LINE/L2	(0)	3426	2620	3888627
215	30.8	0.0	16.5	chr8	67255636	67255744	(77882892)	+	MamSINE1	SINE/tRNA-RTE	43	133	(157)	3888964
29	0.0	0.0	0.0	chr8	67343821	67343847	(77794789)	+	(GCG)n	Simple_repeat	1	27	(0)	3889097
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
1498	22.1	1.9	8.2	chr8	67366063	67366342	(77772294)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	113	3889129
4914	8.4	0.2	1.9	chr8	67366343	67366533	(77772103)	+	MER41B	LTR/ERV1	1	190	(444)	3889130
805	16.6	0.0	0.7	chr8	70472520	70472659	(74665977)	C	L1MB3	LINE/L1	(1)	6182	6044	3893872
659	6.7	0.0	16.0	chr8	70472666	70472790	(74665846)	+	MER57-int	LTR/ERV1	7155	7259	(278)	3893873
313	26.0	0.0	0.0	chr8	70472795	70472867	(74665769)	C	L1MB4	LINE/L1	(6397)	210	138	3893874
1292	15.1	2.0	8.6	chr8	70472872	70473139	(74665497)	+	MER57A-int	LTR/ERV1	5938	6187	(0)	3893875
182	30.9	9.3	9.8	chr8	73356735	73356949	(71781687)	+	L2b	LINE/L2	3139	3352	(23)	3897849
333	31.6	9.5	2.6	chr8	73520553	73520747	(71617889)	+	MLT1L	LTR/ERVL-MaLR	165	374	(236)	3898087
1119	17.2	0.5	0.5	chr8	73520769	73520961	(71617675)	+	MLT1L	LTR/ERVL-MaLR	418	610	(0)	3898087
3911	13.9	12.6	0.0	chr8	79691357	79692073	(65446563)	C	LTR8B	LTR/ERV1	(0)	820	1	3906346
162	10.5	0.0	0.0	chr8	81842344	81842580	(63296056)	+	(GAGA)n	Simple_repeat	1	237	(0)	3909852
371	34.6	3.7	0.0	chr8	85410493	85410622	(59728014)	C	MIRb	SINE/MIR	(127)	141	7	3914543
286	33.2	22.4	3.5	chr8	85410722	85411270	(59727366)	+	Plat_L3	LINE/CR1	2576	3233	(353)	3914544
2899	18.4	7.3	4.4	chr8	85506912	85507616	(59631020)	C	LTR8A	LTR/ERV1	(0)	727	1	3914670
943	27.8	3.1	4.7	chr8	85507617	85507742	(59630894)	+	L1MC5a	LINE/L1	2629	2753	(24)	3914669
520	17.5	11.7	5.5	chr8	89796704	89796869	(55341767)	+	ORSL	DNA/hAT-Tip100	62	246	(29)	3920268
4192	11.5	2.8	2.1	chr8	89796870	89797498	(55341138)	+	MER41B	LTR/ERV1	1	634	(0)	3920269
1874	15.8	1.0	1.7	chr8	90194547	90194844	(54943792)	C	AluJo	SINE/Alu	(15)	297	2	3920872
546	37.6	6.8	1.0	chr8	93501860	93502259	(51636377)	+	L2c	LINE/L2	1912	2336	(1083)	3925304
4362	13.3	0.8	0.2	chr8	93873619	93874248	(51264388)	C	MER41B	LTR/ERV1	(0)	634	1	3925971
3659	15.7	6.1	4.2	chr8	93874249	93874676	(51263960)	C	LTR8A	LTR/ERV1	(2)	725	316	3925972
15	5.5	0.0	0.0	chr8	93916685	93916703	(51221933)	+	(G)n	Simple_repeat	1	19	(0)	3926054
15	24.9	0.0	0.0	chr8	93916808	93916850	(51221786)	+	(CCGCCC)n	Simple_repeat	1	43	(0)	3926055
14	13.8	0.0	5.6	chr8	94475139	94475174	(50663462)	+	(CCTGC)n	Simple_repeat	1	36	(0)	3926896
185	26.7	7.7	0.0	chr8	94475260	94475319	(50663317)	C	L2b	LINE/L2	(8)	3418	3354	3926897
217	32.9	0.0	8.9	chr8	94475420	94475509	(50663127)	C	L2b	LINE/L2	(0)	3375	3294	3926897
2467	7.8	0.7	0.0	chr8	94634829	94635134	(50503502)	+	AluSp	SINE/Alu	1	308	(5)	3927271
15	31.6	0.0	1.6	chr8	95133656	95133719	(50004917)	+	G-rich	Low_complexity	1	64	(0)	3928263
18	29.8	1.8	0.0	chr8	95133723	95133779	(50004857)	+	(GC)n	Simple_repeat	1	58	(0)	3928264
282	33.0	1.8	5.9	chr8	96235753	96235871	(48902765)	+	MIRb	SINE/MIR	13	126	(142)	3929960
973	16.8	3.1	5.9	chr8	97325675	97325876	(47812760)	+	LTR18B	LTR/ERVL	1	196	(418)	3931569
1551	13.1	11.3	2.3	chr8	97325874	97326139	(47812497)	+	LTR18B	LTR/ERVL	322	614	(0)	3931569
2712	15.0	9.9	3.0	chr8	97762008	97762531	(47376105)	+	LTR6A	LTR/ERV1	1	564	(0)	3932377
13	0.0	5.0	0.0	chr8	97762557	97762576	(47376060)	+	(TGTT)n	Simple_repeat	1	21	(0)	3932378
197	30.1	0.8	13.4	chr8	97762621	97762638	(47375998)	+	L2c	LINE/L2	3264	3281	(106)	3932379
4178	11.7	0.3	8.7	chr8	97762639	97763208	(47375428)	+	MER41B	LTR/ERV1	1	515	(119)	3932380
15	24.2	3.6	1.8	chr8	97775888	97775942	(47362694)	+	(GGC)n	Simple_repeat	1	57	(0)	3932412
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
15	9.7	0.0	0.0	chr8	100150590	100150611	(44988025)	+	(AG)n	Simple_repeat	1	22	(0)	3936243
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
372	23.2	13.7	4.1	chr8	100409660	100409830	(44728806)	+	MamRep137	DNA/TcMar-Tigger	57	246	(264)	3936729
2226	12.4	12.9	0.9	chr8	100501529	100501976	(44636660)	C	LTR54	LTR/ERV1	(0)	510	1	3936907
21	21.2	3.3	6.3	chr8	100722185	100722276	(44416360)	+	GA-rich	Low_complexity	1	95	(0)	3937327
13	28.1	1.7	3.3	chr8	100722203	100722314	(44416322)	+	G-rich	Low_complexity	1	110	(0)	3937328
12	21.7	1.6	7.9	chr8	101205648	101205709	(43932927)	+	(CGCCT)n	Simple_repeat	1	63	(0)	3938342
416	29.1	7.3	4.7	chr8	101374147	101374359	(43764277)	C	MIRb	SINE/MIR	(23)	245	27	3938657
1274	10.5	19.2	2.2	chr8	102010034	102010351	(43128285)	+	MER83B	LTR/ERV1	1	372	(6)	3939649
12	0.0	0.0	5.0	chr8	102412758	102412777	(42725859)	+	(GGA)n	Simple_repeat	1	20	(0)	3940263
47	0.0	0.0	0.0	chr8	105098165	105098204	(40040432)	+	(CA)n	Simple_repeat	1	40	(0)	3944716
251	27.8	14.9	10.2	chr8	105098211	105098446	(40040190)	+	L2c	LINE/L2	3096	3344	(43)	3944717
1744	22.5	5.3	5.1	chr8	105243918	105244464	(39894172)	+	LTR55	LTR/ERVL?	1	548	(0)	3944893
239	33.2	5.3	10.1	chr8	107215286	107215543	(37923093)	+	L2b	LINE/L2	3140	3384	(3)	3947645
2728	4.3	0.0	0.0	chr8	107336385	107336688	(37801948)	+	AluY	SINE/Alu	2	305	(6)	3947823
2738	14.5	10.3	4.8	chr8	110894390	110894968	(34243668)	C	LTR18B	LTR/ERVL	(0)	614	1	3952802
379	35.8	4.4	6.9	chr8	116553441	116553746	(28584890)	C	MamTip2	DNA/hAT-Tip100	(4)	301	4	3960209
1115	28.7	2.9	9.5	chr8	116762220	116762651	(28375985)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	108	3960549
2229	11.4	0.0	3.2	chr8	116762652	116762967	(28375669)	+	AluSz	SINE/Alu	1	306	(6)	3960550
292	29.7	5.6	1.0	chr8	123179034	123179135	(21959501)	+	MIR3	SINE/MIR	72	178	(30)	3971330
1901	18.4	5.1	3.4	chr8	124271205	124271587	(20867049)	+	MLT1B	LTR/ERVL-MaLR	1	457	(0)	3973420
3193	16.2	9.5	1.0	chr8	124448843	124449422	(20689214)	C	MER51A	LTR/ERV1	(0)	634	1	3973735
1229	22.6	8.4	11.7	chr8	124449423	124449529	(20689107)	C	MER41C	LTR/ERV1	(413)	108	2	3973734
878	23.0	7.5	9.7	chr8	125942191	125942570	(19196066)	+	MER92C	LTR/ERV1	220	590	(0)	3976644
184	28.7	0.9	10.7	chr8	127898905	127899025	(17239611)	C	LFSINE_Vert	SINE/tRNA	(280)	179	71	3980357
190	14.3	0.0	6.7	chr8	127967894	127967938	(17170698)	C	L2c	LINE/L2	(10)	3377	3336	3980504
665	26.6	2.3	0.6	chr8	128048612	128048781	(17089855)	+	MIRb	SINE/MIR	42	214	(54)	3980681
16	16.6	0.0	0.0	chr8	128176893	128176919	(16961717)	+	(T)n	Simple_repeat	1	27	(0)	3980965
13	15.4	5.6	0.0	chr8	129552612	129552647	(15585989)	+	(CCAGAAT)n	Simple_repeat	1	38	(0)	3983352
368	26.7	1.0	1.0	chr8	129557005	129557106	(15581530)	+	LTR33C	LTR/ERVL	30	131	(498)	3983362
539	28.8	10.2	0.0	chr8	129557131	129557394	(15581242)	+	LTR33C	LTR/ERVL	336	629	(0)	3983362
314	29.0	9.5	0.8	chr8	129574598	129574722	(15563914)	+	L2	LINE/L2	2853	2989	(430)	3983396
334	36.6	7.4	4.5	chr8	129574738	129575117	(15563519)	+	L2c	LINE/L2	2941	3341	(46)	3983397
614	28.9	6.4	2.4	chr8	129583975	129584229	(15554407)	+	MER102b	DNA/hAT-Charlie	30	295	(46)	3983410
182	29.6	3.6	0.0	chr8	130032489	130032542	(15106094)	C	MIRc	SINE/MIR	(181)	87	32	3984232
2557	14.4	2.7	2.5	chr8	130032606	130032655	(15105981)	+	MER65A	LTR/ERV1	1	48	(397)	3984236
2053	15.7	0.3	0.3	chr8	130032656	130032961	(15105675)	+	AluJo	SINE/Alu	1	306	(6)	3984237
821	30.4	13.9	2.4	chr8	130671760	130672150	(14466486)	C	L2a	LINE/L2	(36)	3390	2943	3985560
2568	15.1	3.5	0.2	chr8	130672151	130672568	(14466068)	+	LTR47A2	LTR/ERVL	1	432	(0)	3985561
19	10.8	0.0	6.5	chr8	131904178	131904223	(13234413)	+	(CCCTTCG)n	Simple_repeat	1	46	(0)	3987615
29	16.0	4.9	3.5	chr8	132775354	132775435	(12363201)	+	(GGC)n	Simple_repeat	1	86	(0)	3989225
693	28.3	9.0	7.4	chr8	133390924	133391423	(11747213)	+	MLT1J	LTR/ERVL-MaLR	1	509	(3)	3990357
184	36.8	8.8	0.9	chr8	133540247	133540361	(11598275)	C	L3b	LINE/CR1	(116)	5116	4992	3990669
2568	16.1	6.8	0.4	chr8	133575626	133576115	(11562521)	+	Tigger3	DNA/TcMar-Tigger	1	524	(2505)	3990744
1854	13.7	4.5	11.2	chr8	133576116	133576283	(11562353)	C	THE1D	LTR/ERVL-MaLR	(0)	381	224	3990745
2640	5.8	0.0	0.3	chr8	133576284	133576595	(11562041)	+	AluY	SINE/Alu	1	311	(0)	3990746
669	29.4	7.5	2.0	chr8	134710213	134710554	(10428082)	+	MER65D	LTR/ERV1	17	423	(50)	3992723
16	4.5	0.0	0.0	chr8	134832489	134832511	(10306125)	+	(CACG)n	Simple_repeat	1	23	(0)	3992946
541	18.7	8.8	0.0	chr8	140465771	140465904	(4672732)	+	MER65D	LTR/ERV1	1	147	(326)	4002008
718	16.2	0.0	0.9	chr8	140465975	140466085	(4672551)	C	FLAM_A	SINE/Alu	(23)	119	10	4002009
1581	16.8	4.1	1.0	chr8	140466120	140466426	(4672210)	+	MER65D	LTR/ERV1	157	473	(0)	4002008
330	30.3	6.9	0.9	chr8	140618843	140618964	(4519672)	+	L1ME4a	LINE/L1	6010	6123	(1)	4002279
16	28.8	0.0	0.0	chr8	141128444	141128494	(4010142)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4003235
52	25.4	4.3	1.0	chr8	141308451	141308635	(3830001)	+	(CCGCCC)n	Simple_repeat	1	193	(0)	4003445
12	27.2	2.0	2.0	chr8	143541484	143541533	(1597103)	+	(GCGGA)n	Simple_repeat	1	51	(0)	4006298
2573	18.9	2.6	5.5	chr8	143542021	143542109	(1596527)	+	L1MB3	LINE/L1	5523	5615	(568)	4006299
2138	6.2	12.2	0.3	chr8	143542110	143542398	(1596238)	+	7SK	RNA	1	328	(3)	4006300
13	9.3	0.0	0.0	chr8	143944284	143944306	(1194330)	+	(CCCT)n	Simple_repeat	1	23	(0)	4006862
33	0.0	0.0	0.0	chr8	143952182	143952209	(1186427)	+	(AC)n	Simple_repeat	1	28	(0)	4006869
13	20.3	0.0	0.0	chr8	143952210	143952239	(1186397)	+	(GCAC)n	Simple_repeat	1	30	(0)	4006870
1072	8.4	0.0	0.0	chr8	144061158	144061311	(1077325)	+	MER41A	LTR/ERV1	1	154	(400)	4007036
1672	7.8	0.9	0.5	chr8	144061319	144061535	(1077101)	+	AluSx	SINE/Alu	85	302	(10)	4007037
947	27.9	10.0	3.0	chr8	144074071	144074432	(1064204)	+	Arthur1B	DNA/hAT-Tip100	2	391	(834)	4007066
1806	16.6	1.0	1.3	chr8	144074571	144074872	(1063764)	C	AluJr	SINE/Alu	(11)	301	1	4007067
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
19	6.7	0.0	3.0	chr8	144104524	144104556	(1034080)	+	(TCGC)n	Simple_repeat	1	33	(0)	4007111
1919	15.1	2.3	0.3	chr8	144292679	144292977	(845659)	+	AluSz6	SINE/Alu	1	305	(7)	4007414
212	26.4	11.0	3.7	chr8	144373200	144373333	(765303)	C	L2a	LINE/L2	(372)	3054	2910	4007536
314	32.0	10.5	0.2	chr8	144457247	144457439	(681197)	+	MIR	SINE/MIR	28	253	(15)	4007640
8633	2.9	0.0	0.0	chr8	144795894	144796861	(341775)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	4008114
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
411	15.9	5.8	2.3	chr8	144853539	144853640	(284996)	C	LTR54	LTR/ERV1	(391)	107	1	4008204
399	8.9	8.1	0.0	chr8	144853665	144853743	(284893)	+	L1MB8	LINE/L1	6093	6178	(0)	4008205
602	22.9	7.9	1.1	chr8	144853757	144853933	(284703)	+	L1M4	LINE/L1	5295	5484	(700)	4008206
408	29.9	1.3	0.0	chr9	5493633	5493779	(132900938)	C	MER5B	DNA/hAT-Charlie	(29)	149	1	4016556
13	26.4	3.2	3.1	chr9	5628961	5629022	(132765695)	+	(GCGCG)n	Simple_repeat	1	64	(0)	4016814
13	16.4	2.8	2.7	chr9	6008497	6008532	(132386185)	+	(CCCCG)n	Simple_repeat	1	37	(0)	4017400
2044	13.2	3.2	0.0	chr9	6681834	6682135	(131712582)	C	AluSz6	SINE/Alu	(0)	312	1	4018486
201	34.0	6.7	2.5	chr9	14926974	14927130	(123467587)	C	L2a	LINE/L2	(422)	2997	2834	4029647
701	19.2	1.5	0.0	chr9	33024182	33024311	(105370406)	C	AluSx	SINE/Alu	(179)	133	2	4054623
1530	15.1	8.3	0.7	chr9	33290031	33290308	(105104409)	+	AluJr	SINE/Alu	2	302	(10)	4055139
605	23.1	11.0	0.0	chr9	33511237	33511422	(104883295)	C	L1M5	LINE/L1	(1890)	4256	4048	4055590
1364	21.8	12.5	7.0	chr9	33703018	33703490	(104691227)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	4055843
3884	12.0	0.7	0.0	chr9	33703617	33704166	(104690551)	+	MER41A	LTR/ERV1	1	554	(0)	4055844
20	6.9	0.0	0.0	chr9	35072557	35072587	(103322130)	+	(GGCAGC)n	Simple_repeat	1	31	(0)	4058317
35	42.0	0.8	0.8	chr9	35829424	35829664	(102565053)	+	(CCGCCC)n	Simple_repeat	1	243	(0)	4059488
2278	9.7	0.0	1.3	chr9	37466643	37466940	(100927777)	+	AluSx1	SINE/Alu	2	295	(17)	4062719
1219	8.5	0.0	2.4	chr9	37592779	37592942	(100801775)	+	AluSx	SINE/Alu	125	284	(28)	4062992
28	0.0	0.0	0.0	chr9	37592943	37592968	(100801749)	+	(AAT)n	Simple_repeat	1	26	(0)	4062993
13	14.7	7.9	0.0	chr9	37904198	37904235	(100490482)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	4063617
3457	13.7	1.5	1.6	chr9	38170778	38171325	(100223392)	C	LTR10A	LTR/ERV1	(62)	547	1	4064080
350	29.4	8.2	8.2	chr9	38252613	38252729	(100141988)	+	L2c	LINE/L2	3070	3183	(192)	4064247
4377	8.1	0.0	0.0	chr9	38252730	38253283	(100141434)	+	MER41A	LTR/ERV1	1	554	(0)	4064248
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
715	24.2	1.3	1.9	chr9	69215757	69215913	(69178804)	+	FRAM	SINE/Alu	1	156	(20)	4081250
5015	9.7	0.9	0.2	chr9	69306939	69307567	(69087150)	C	MER41B	LTR/ERV1	(0)	634	1	4081410
11	13.8	2.8	5.4	chr9	70258925	70258960	(68135757)	+	(GCGCGA)n	Simple_repeat	1	37	(0)	4082831
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
4217	11.5	2.7	0.2	chr9	77893076	77893693	(60501024)	+	MER41B	LTR/ERV1	1	634	(0)	4094938
2393	7.7	0.0	2.6	chr9	78235587	78235899	(60158818)	C	AluSq2	SINE/Alu	(8)	305	1	4095457
13	9.7	9.1	0.0	chr9	83708270	83708302	(54686415)	+	(TGCGCGC)n	Simple_repeat	1	36	(0)	4103352
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
2163	11.3	1.9	4.1	chr9	88309897	88310215	(50084502)	C	AluSx1	SINE/Alu	(0)	312	1	4110870
1139	26.7	1.3	1.0	chr9	88310419	88310732	(50083985)	+	FordPrefect	DNA/hAT-Tip100	1355	1669	(14)	4110871
4569	11.4	0.3	0.5	chr9	88721446	88722080	(49672637)	C	MER41B	LTR/ERV1	(0)	634	1	4111639
2137	12.2	0.3	1.0	chr9	91482508	91482801	(46911916)	C	AluSq2	SINE/Alu	(21)	292	1	4115257
255	29.7	11.9	1.7	chr9	92670393	92670512	(45724205)	+	MIRc	SINE/MIR	37	170	(92)	4117046
14	16.4	7.3	0.0	chr9	95462985	95463025	(42931692)	+	(CACC)n	Simple_repeat	1	44	(0)	4121257
793	22.9	10.6	4.8	chr9	95834247	95834539	(42560178)	C	LTR82A	LTR/ERVL	(465)	407	96	4121829
21	16.2	2.8	6.8	chr9	96417538	96417608	(41977109)	+	(CCGC)n	Simple_repeat	1	73	(0)	4122831
4412	6.5	0.4	0.2	chr9	96420849	96421401	(41973316)	+	MER41A	LTR/ERV1	1	554	(0)	4122837
18	3.3	6.5	0.0	chr9	96654925	96654955	(41739762)	+	(CCTCGC)n	Simple_repeat	1	33	(0)	4123268
1329	19.0	4.5	6.1	chr9	96683365	96683723	(41710994)	C	MER65B	LTR/ERV1	(178)	353	1	4123321
242	18.3	4.8	4.8	chr9	97013943	97014005	(41380712)	+	MER103C	DNA/hAT-Charlie	180	242	(55)	4123850
10959	9.1	2.2	0.6	chr9	97622125	97623059	(40771658)	+	THE1B-int	LTR/ERVL-MaLR	637	1580	(0)	4124821
50	23.0	3.8	5.9	chr9	97803191	97803463	(40591254)	+	GA-rich	Low_complexity	1	267	(0)	4125170
15	13.7	0.0	2.9	chr9	97803548	97803581	(40591136)	+	(CCGCCC)n	Simple_repeat	1	34	(0)	4125171
2105	9.5	0.3	7.0	chr9	97960587	97960913	(40433804)	C	AluSz	SINE/Alu	(7)	305	1	4125486
39	2.7	0.0	0.0	chr9	97961214	97961251	(40433466)	+	(GT)n	Simple_repeat	1	38	(0)	4125487
2663	13.6	0.8	0.2	chr9	98045313	98045711	(40349006)	+	MER57B1	LTR/ERV1	1	401	(0)	4125675
3430	14.2	0.6	0.2	chr9	98049370	98049871	(40344846)	C	MER41B	LTR/ERV1	(130)	504	1	4125682
2450	16.1	0.7	0.0	chr9	98049875	98050272	(40344445)	C	MER57B1	LTR/ERV1	(0)	401	1	4125683
8118	7.4	4.7	2.7	chr9	98050273	98050781	(40343936)	C	MER57-int	LTR/ERV1	(0)	7537	7007	4125683
401	26.1	22.1	0.6	chr9	98833359	98833701	(39561016)	C	L2	LINE/L2	(433)	2986	2549	4127310
219	25.3	2.2	8.4	chr9	98833675	98833769	(39560948)	C	MIR3	SINE/MIR	(8)	200	112	4127311
3874	13.8	4.3	1.3	chr9	98851583	98852197	(39542520)	C	MER41B	LTR/ERV1	(0)	634	1	4127345
484	28.4	1.3	0.6	chr9	98852198	98852237	(39542480)	+	MIRb	SINE/MIR	226	264	(4)	4127344
404	30.3	9.7	1.3	chr9	98867961	98868271	(39526446)	+	L2	LINE/L2	1956	2295	(1124)	4127381
2449	9.5	0.0	0.0	chr9	99073691	99073995	(39320722)	C	AluSc	SINE/Alu	(2)	307	3	4127793
3022	15.0	5.1	9.2	chr9	99073996	99074523	(39320194)	+	LTR9	LTR/ERV1	95	612	(0)	4127792
5070	8.3	1.7	0.2	chr9	99301912	99302535	(39092182)	+	MER41B	LTR/ERV1	1	634	(0)	4128193
17	0.0	0.0	0.0	chr9	99821691	99821741	(38572976)	+	(CG)n	Simple_repeat	1	51	(0)	4129131
3158	26.3	16.2	2.6	chr9	104774841	104776373	(33618344)	+	L2a	LINE/L2	1419	3206	(220)	4136237
1012	34.2	11.2	3.5	chr9	105251013	105251928	(33142789)	+	L2c	LINE/L2	2274	3277	(110)	4137235
288	26.4	7.6	4.0	chr9	105299558	105299683	(33095034)	+	MIR3	SINE/MIR	2	132	(76)	4137316
4578	9.2	3.6	0.2	chr9	107675390	107675999	(30718718)	C	MER41B	LTR/ERV1	(0)	634	3	4141340
549	25.8	13.2	4.3	chr9	107676000	107676185	(30718532)	C	MIR	SINE/MIR	(49)	213	1	4141339
236	32.0	8.1	0.0	chr9	108963842	108963966	(29430751)	C	MIR3	SINE/MIR	(15)	193	58	4143565
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
329	24.8	7.9	11.4	chr9	112059091	112059174	(26335543)	C	L2a	LINE/L2	(50)	3376	3300	4149089
2406	9.6	0.0	0.3	chr9	112069993	112070306	(26324411)	C	AluSq2	SINE/Alu	(0)	313	1	4149108
12	9.7	0.0	0.0	chr9	112174590	112174611	(26220106)	+	(TGAA)n	Simple_repeat	1	22	(0)	4149309
1995	24.9	8.4	0.4	chr9	112224634	112225137	(26169580)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	4149408
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
373	32.1	9.4	1.6	chr9	113228032	113228218	(25166499)	C	MIRc	SINE/MIR	(63)	205	3	4151238
1158	18.4	9.0	2.3	chr9	113345533	113345962	(25048755)	C	LTR54	LTR/ERV1	(5)	505	4	4151469
2242	13.5	0.0	2.2	chr9	113346016	113346334	(25048383)	C	AluSx	SINE/Alu	(0)	312	1	4151470
510	32.0	1.7	1.1	chr9	114238783	114238956	(24155761)	C	MIRb	SINE/MIR	(14)	254	80	4153238
14	24.3	2.0	2.0	chr9	114505506	114505558	(23889159)	+	(CCCGCC)n	Simple_repeat	1	53	(0)	4153794
4193	11.2	2.8	3.0	chr9	114557588	114557916	(23836801)	C	MER41B	LTR/ERV1	(290)	344	1	4153921
1994	19.3	4.4	6.4	chr9	114557917	114558081	(23836636)	C	Tigger9b	DNA/TcMar-Tigger	(315)	309	149	4153918
368	36.3	1.8	3.6	chr9	116394288	116394510	(22000207)	C	MIRb	SINE/MIR	(35)	233	15	4157296
11	23.0	0.0	6.4	chr9	116395287	116395333	(21999384)	+	GA-rich	Low_complexity	1	47	(0)	4157300
235	35.5	9.8	0.4	chr9	116421200	116421431	(21973286)	+	L2	LINE/L2	2608	2863	(556)	4157351
185	31.6	3.4	0.0	chr9	116437995	116438051	(21956666)	+	MIR3	SINE/MIR	76	134	(74)	4157391
375	33.7	4.3	2.6	chr9	116438112	116438488	(21956229)	+	L2c	LINE/L2	2627	3012	(375)	4157392
717	28.5	3.7	5.9	chr9	116467123	116467269	(21927448)	+	MLT1K	LTR/ERVL-MaLR	294	439	(156)	4157447
2251	12.8	4.3	1.1	chr9	116490507	116490869	(21903848)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4157497
546	21.2	1.3	0.0	chr9	120537171	120537310	(17857407)	+	MIRb	SINE/MIR	45	181	(81)	4165190
16	13.4	4.7	2.2	chr9	120793486	120793528	(17601189)	+	(GGAGGTG)n	Simple_repeat	1	45	(0)	4165720
683	27.8	14.2	3.8	chr9	121218651	121218912	(17175805)	C	MER65D	LTR/ERV1	(157)	316	1	4166523
253	24.1	0.0	1.8	chr9	121218913	121218967	(17175750)	+	MIRb	SINE/MIR	123	176	(92)	4166525
291	30.2	2.5	1.2	chr9	121281752	121281897	(17112820)	+	MIRc	SINE/MIR	6	146	(84)	4166665
204	33.3	16.4	3.1	chr9	121286416	121286709	(17108008)	+	L2b	LINE/L2	2970	3310	(65)	4166674
472	26.2	17.8	0.5	chr9	121286786	121286956	(17107761)	+	MIRb	SINE/MIR	30	220	(48)	4166675
1376	13.3	0.9	3.4	chr9	122051373	122051605	(16343112)	+	MER73	LTR/ERVL	1	227	(417)	4168195
29	7.5	2.4	0.0	chr9	122051612	122051653	(16343064)	+	(TC)n	Simple_repeat	1	43	(0)	4168196
1640	15.3	6.0	0.0	chr9	122051655	122051935	(16342782)	+	MER73	LTR/ERVL	344	642	(2)	4168195
37	33.8	1.4	3.7	chr9	122093034	122093247	(16301470)	+	(CCG)n	Simple_repeat	1	217	(0)	4168287
2434	8.1	0.7	0.0	chr9	122828828	122829135	(15565582)	+	AluSx1	SINE/Alu	1	310	(2)	4169621
291	32.5	6.2	0.8	chr9	123340147	123340267	(15054450)	C	MIRb	SINE/MIR	(47)	221	94	4170547
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
26	20.9	0.0	0.0	chr9	125189733	125189788	(13204929)	+	(GCG)n	Simple_repeat	1	56	(0)	4174090
1767	15.2	5.8	4.1	chr9	125284633	125284974	(13109743)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	4174355
1056	23.4	0.5	3.9	chr9	125285056	125285286	(13109431)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	4174356
344	9.4	6.6	0.3	chr9	125409649	125410266	(12984451)	+	(CA)n	Simple_repeat	1	659	(0)	4174630
188	29.0	0.0	10.4	chr9	127129415	127129491	(11265226)	+	L3	LINE/CR1	1648	1716	(2383)	4177662
19	14.9	0.0	0.0	chr9	127424461	127424497	(10970220)	+	(GTTGCCA)n	Simple_repeat	1	37	(0)	4178181
1125	14.7	0.0	0.0	chr9	128097432	128097594	(10297123)	C	AluSz6	SINE/Alu	(15)	297	135	4179773
210	32.4	2.6	0.0	chr9	128203054	128203127	(10191590)	+	MIR1_Amn	SINE/MIR	91	166	(64)	4179970
8063	6.3	0.4	0.1	chr9	128279220	128280182	(10114535)	C	LTR13A	LTR/ERVK	(0)	966	1	4180126
273	28.6	5.6	3.1	chr9	128296832	128296989	(10097728)	C	MIRb	SINE/MIR	(1)	261	99	4180174
2325	10.4	0.0	0.0	chr9	128306975	128307273	(10087444)	+	AluSx1	SINE/Alu	1	299	(13)	4180204
1149	20.1	3.4	9.9	chr9	128307295	128307448	(10087269)	+	AluJo	SINE/Alu	2	132	(180)	4180205
2426	7.0	1.0	0.0	chr9	128419868	128420167	(9974550)	C	AluSx1	SINE/Alu	(9)	303	1	4180476
317	26.0	7.7	1.0	chr9	128688587	128688683	(9706034)	C	MIR3	SINE/MIR	(57)	151	48	4181102
248	25.0	0.0	7.2	chr9	129023394	129023462	(9371255)	C	MIR1_Amn	SINE/MIR	(76)	154	91	4181895
229	24.3	13.7	0.0	chr9	129023507	129023613	(9371104)	C	MIRb	SINE/MIR	(30)	238	115	4181896
201	33.8	5.8	5.9	chr9	129069600	129069801	(9324916)	C	MIRb	SINE/MIR	(33)	235	22	4182027
221	27.6	11.2	0.0	chr9	129258232	129258318	(9136399)	C	MIR	SINE/MIR	(117)	145	48	4182435
15	22.7	3.3	3.2	chr9	129258476	129258535	(9136182)	+	(GCCCC)n	Simple_repeat	1	62	(0)	4182436
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
1999	11.8	7.7	0.0	chr9	129587248	129587536	(8807181)	+	AluSq	SINE/Alu	1	313	(0)	4183199
228	28.2	2.3	4.5	chr9	129596336	129596424	(8798293)	+	MIRc	SINE/MIR	107	193	(75)	4183213
4158	6.5	2.2	1.8	chr9	129599411	129599830	(8794887)	C	MER41A	LTR/ERV1	(130)	424	1	4183219
422	25.0	11.3	4.8	chr9	129599831	129599884	(8794833)	C	MIRb	SINE/MIR	(106)	162	107	4183218
2164	10.4	0.3	1.3	chr9	129599885	129600020	(8794697)	+	AluSx	SINE/Alu	1	136	(176)	4183222
2300	10.9	0.0	0.0	chr9	129600021	129600322	(8794395)	+	AluSx1	SINE/Alu	1	302	(10)	4183223
13	20.6	6.8	3.2	chr9	129803226	129803284	(8591433)	+	(GGC)n	Simple_repeat	1	63	(0)	4183683
499	34.2	1.1	2.1	chr9	129863365	129863555	(8531162)	C	MIRb	SINE/MIR	(19)	249	61	4183807
2258	11.2	0.0	0.0	chr9	129882789	129883083	(8511634)	C	AluSz	SINE/Alu	(17)	295	1	4183832
2902	16.9	5.6	1.5	chr9	129883084	129883155	(8511562)	C	MER41D	LTR/ERV1	(482)	75	5	4183831
4209	8.1	1.3	1.1	chr9	130150673	130151060	(8243657)	C	MER41A	LTR/ERV1	(166)	388	2	4184412
34	8.7	0.0	0.0	chr9	130579630	130579678	(7815039)	+	(GCG)n	Simple_repeat	1	49	(0)	4185377
15	20.4	1.5	7.6	chr9	131531183	131531247	(6863470)	+	(CCGCGC)n	Simple_repeat	1	66	(0)	4187226
13	21.3	1.6	7.8	chr9	132878302	132878364	(5516353)	+	(CGCCG)n	Simple_repeat	1	64	(0)	4189657
710	16.4	0.0	0.0	chr9	133283158	133283279	(5111438)	C	MER65C	LTR/ERV1	(131)	330	209	4190351
252	10.8	0.0	0.0	chr9	133283335	133283371	(5111346)	C	MER65C	LTR/ERV1	(216)	245	209	4190351
6283	15.0	1.3	0.8	chr9	133283398	133284394	(5110323)	+	LTR5B	LTR/ERVK	1	1002	(0)	4190352
20	8.8	7.7	3.6	chr9	133375984	133376035	(5018682)	+	(GCTC)n	Simple_repeat	1	56	(0)	4190476
43615	7.8	0.6	0.9	chr9	135440177	135444140	(2950577)	C	HERVE-int	LTR/ERV1	(3837)	3976	1	4193232
1231	23.9	9.6	6.3	chr9	135949847	135950288	(2444429)	+	MLT1E3	LTR/ERVL-MaLR	161	618	(6)	4193831
457	29.9	9.1	1.8	chr9	135950337	135950811	(2443906)	+	L1MEd	LINE/L1	1836	2387	(120)	4193830
31	25.7	3.5	1.7	chr9	135961271	135961384	(2433333)	+	(GCC)n	Simple_repeat	1	118	(0)	4193846
619	30.6	4.3	3.2	chr9	136237967	136238219	(2156498)	C	LTR37B	LTR/ERV1	(212)	256	1	4194178
20	20.9	3.9	3.8	chr9	136327353	136327429	(2067288)	+	(CCCCCGC)n	Simple_repeat	1	80	(0)	4194271
13	26.9	2.2	0.0	chr9	136327481	136327525	(2067192)	+	(GGC)n	Simple_repeat	1	46	(0)	4194272
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
12	26.5	3.2	3.1	chr9	136410607	136410668	(1984049)	+	(AGCGGA)n	Simple_repeat	1	64	(0)	4194344
6413	12.8	3.0	0.7	chr9	136788798	136789776	(1604941)	C	LTR5B	LTR/ERVK	(0)	1002	1	4194804
3968	10.7	2.0	0.0	chr9	137075103	137075645	(1319072)	+	MER41A	LTR/ERV1	1	554	(0)	4195198
13	5.3	0.0	0.0	chr9	137087114	137087133	(1307584)	+	(CCG)n	Simple_repeat	1	20	(0)	4195210
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
17	27.6	3.1	0.0	chr9	137590625	137590689	(804028)	+	G-rich	Low_complexity	1	67	(0)	4195819
2170	20.6	6.6	4.4	chrX	2502800	2503215	(153537680)	+	MER41D	LTR/ERV1	1	428	(129)	4362999
4513	11.3	0.9	0.2	chrX	3570811	3571438	(152469457)	+	MER41B	LTR/ERV1	2	634	(0)	4365106
4211	10.3	0.0	0.0	chrX	3701577	3702130	(152338765)	+	MER41A	LTR/ERV1	1	554	(0)	4365397
4788	9.9	0.6	0.9	chrX	6985049	6985710	(149055185)	C	PABL_A	LTR/ERV1	(0)	660	1	4371062
4411	7.4	0.0	0.7	chrX	6985788	6986345	(149054550)	+	MER41A	LTR/ERV1	1	554	(0)	4371063
377	30.8	1.5	5.1	chrX	11423632	11423768	(144617127)	C	L2b	LINE/L2	(0)	3375	3244	4377990
242	22.9	12.6	0.0	chrX	12950349	12950431	(143090464)	+	MIRc	SINE/MIR	70	164	(104)	4380369
186	25.0	1.6	0.0	chrX	12950419	12950478	(143090417)	C	MIR	SINE/MIR	(0)	262	202	4380370
846	14.4	7.5	3.9	chrX	12955716	12955895	(143085000)	C	MER53	DNA/hAT	(5)	188	2	4380383
3922	12.5	2.2	2.4	chrX	13103515	13104098	(142936797)	C	MER41B	LTR/ERV1	(48)	586	4	4380629
3247	16.1	2.3	1.4	chrX	13104099	13104654	(142936241)	+	L1MB7	LINE/L1	5613	6173	(11)	4380628
48	0.0	0.0	0.0	chrX	13471012	13471052	(142569843)	+	(TG)n	Simple_repeat	1	41	(0)	4381235
577	11.2	0.0	0.0	chrX	13471064	13471143	(142569752)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	4381236
3677	12.3	0.3	3.4	chrX	15883108	15883485	(140157410)	C	MER41B	LTR/ERV1	(271)	363	1	4385119
1317	20.1	11.0	6.3	chrX	15883558	15883999	(140156896)	+	LTR29	LTR/ERV1	158	622	(0)	4385121
3667	13.7	2.1	2.1	chrX	16585430	16586035	(139454860)	C	LTR35	LTR/ERV1	(0)	608	3	4386263
4162	12.2	3.2	2.3	chrX	16586072	16586691	(139454204)	+	MER41B	LTR/ERV1	1	626	(8)	4386264
12	21.4	2.1	4.2	chrX	16719564	16719610	(139321285)	+	(GCGGCG)n	Simple_repeat	1	48	(0)	4386549
625	21.7	6.9	4.7	chrX	22999670	22999838	(133041057)	+	MER96	DNA/hAT-Tip100	3	175	(0)	4396854
14	17.0	6.2	2.0	chrX	24693790	24693837	(131347058)	+	(GCGCG)n	Simple_repeat	1	51	(0)	4400023
4246	13.7	3.2	1.9	chrX	30973985	30974683	(125066212)	+	LTR62	LTR/ERVL	1	709	(0)	4409085
1588	25.8	14.8	1.0	chrX	38818977	38819497	(117221398)	+	L2	LINE/L2	2477	3082	(337)	4419554
644	31.6	2.9	8.9	chrX	38819507	38820021	(117220874)	C	MLT1J	LTR/ERVL-MaLR	(29)	483	1	4419555
4502	9.4	3.1	0.2	chrX	40571136	40571750	(115469145)	C	MER41B	LTR/ERV1	(0)	634	1	4422746
27	8.2	0.0	0.0	chrX	40571843	40571881	(115469014)	+	(ATTC)n	Simple_repeat	1	39	(0)	4422747
1116	18.6	9.5	1.9	chrX	43328406	43328821	(112712074)	+	LTR76	LTR/ERV1	214	596	(0)	4427171
109	2.8	0.0	0.0	chrX	43654464	43654572	(112386323)	+	(CCCCGCCCCT)n	Simple_repeat	1	109	(0)	4427644
12	20.1	4.1	3.9	chrX	47619918	47619966	(108420929)	+	(CGCGG)n	Simple_repeat	1	51	(0)	4434536
2052	13.4	0.3	0.7	chrX	48538992	48539290	(107501605)	+	AluJo	SINE/Alu	3	300	(12)	4436282
240	28.3	6.0	8.7	chrX	48940352	48940492	(107100403)	+	MIR3	SINE/MIR	54	197	(11)	4437129
2458	8.1	0.3	0.0	chrX	49123933	49124241	(106916654)	C	AluSc8	SINE/Alu	(0)	311	2	4437547
403	27.0	1.0	0.0	chrX	63434863	63434962	(92605933)	C	LTR46	LTR/ERV1	(359)	101	1	4450156
280	29.4	5.0	0.6	chrX	63434965	63435135	(92605760)	+	L1ME3C	LINE/L1	5838	6016	(107)	4450157
501	19.6	0.0	12.3	chrX	66728720	66728841	(89312054)	C	Tigger3b	DNA/TcMar-Tigger	(1123)	108	2	4454010
12	25.6	2.4	0.0	chrX	71068325	71068366	(84972529)	+	G-rich	Low_complexity	1	43	(0)	4460743
17	5.3	12.5	0.0	chrX	71068423	71068462	(84972433)	+	(GCAC)n	Simple_repeat	1	45	(0)	4460744
4126	9.9	5.8	1.3	chrX	110000728	110001332	(46039563)	C	MER41B	LTR/ERV1	(0)	634	1	4507751
217	16.2	0.0	0.0	chrX	111681010	111681046	(44359849)	+	MIR	SINE/MIR	197	233	(29)	4510262
3725	11.2	1.8	1.8	chrX	114071435	114071999	(41968896)	+	MER61E	LTR/ERV1	1	565	(4)	4513636
16096	4.3	0.3	0.1	chrX	132880628	132883498	(23157397)	C	L1PA5	LINE/L1	(0)	6154	3281	4540045
193	23.7	0.0	0.0	chrX	132883503	132883540	(23157355)	C	L2a	LINE/L2	(11)	3415	3378	4540046
4854	12.0	1.0	0.0	chrX	132883546	132884247	(23156648)	+	LTR62	LTR/ERVL	1	709	(0)	4540047
595	25.8	1.2	8.7	chrX	139213353	139213535	(16827360)	+	MLT2E	LTR/ERVL	1	169	(459)	4550374
507	30.3	4.3	3.6	chrX	139213545	139213821	(16827074)	+	LTR33C	LTR/ERVL	351	629	(0)	4550375
7807	6.3	0.4	0.1	chrX	152129619	152130583	(3910312)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	4568558
20	34.4	0.0	0.0	chrX	152733618	152733693	(3307202)	+	(ATCCCC)n	Simple_repeat	1	76	(0)	4569318
14	23.4	0.0	2.4	chrX	153971840	153971881	(2069014)	+	(GGC)n	Simple_repeat	1	42	(0)	4570996