12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
13	18.8	4.5	2.2	chr1	1116008	1116051	(247840371)	+	(CCCCAGC)n	Simple_repeat	1	46	(0)	1381
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
13	21.9	3.5	5.0	chr1	1308741	1308798	(247647624)	+	(GGCG)n	Simple_repeat	1	60	(0)	1577
13	17.1	2.3	4.5	chr1	1615445	1615487	(247340935)	+	G-rich	Low_complexity	1	44	(0)	2066
29	3.2	0.0	0.0	chr1	1658919	1658950	(247297472)	+	(CGC)n	Simple_repeat	1	32	(0)	2112
233	22.6	3.1	0.0	chr1	2050070	2050131	(246906291)	C	MER5A	DNA/hAT-Charlie	(79)	110	47	2818
212	32.4	7.5	0.9	chr1	6204853	6204964	(242751458)	C	L2b	LINE/L2	(15)	3360	3241	7830
283	25.3	6.7	0.0	chr1	6205242	6205324	(242751098)	C	MIR3	SINE/MIR	(84)	124	36	7831
2126	8.4	0.0	10.2	chr1	6609157	6609353	(242347069)	+	AluSx	SINE/Alu	134	301	(11)	8534
16	21.6	0.0	0.0	chr1	6963256	6963287	(241993135)	+	(C)n	Simple_repeat	1	32	(0)	9195
625	24.2	18.1	1.2	chr1	7303573	7303898	(241652524)	C	L2a	LINE/L2	(1)	3425	3033	9671
18	4.8	0.0	0.0	chr1	8020075	8020096	(240936326)	+	(A)n	Simple_repeat	1	22	(0)	10764
3445	23.0	5.4	8.1	chr1	8585165	8586228	(240370194)	+	HAL1M8	LINE/L1	1970	2990	(1)	11879
970	24.4	23.9	2.1	chr1	8670355	8671175	(240285247)	C	L2a	LINE/L2	(3)	3423	2294	12029
11	20.1	2.9	0.0	chr1	8873709	8873742	(240082680)	+	G-rich	Low_complexity	1	35	(0)	12435
353	27.6	14.7	2.3	chr1	8941797	8942015	(240014407)	+	Tigger15a	DNA/TcMar-Tigger	441	691	(24)	12603
2378	11.0	0.0	0.0	chr1	8942114	8942423	(240013999)	C	AluSx	SINE/Alu	(2)	310	1	12604
234	29.6	10.0	5.0	chr1	9181574	9181768	(239774654)	C	MIRb	SINE/MIR	(23)	207	9	13109
339	25.3	1.3	0.0	chr1	9404975	9405049	(239551373)	C	L2a	LINE/L2	(9)	3417	3342	13511
714	25.6	6.2	4.1	chr1	9405134	9405353	(239551069)	C	MIRb	SINE/MIR	(10)	258	34	13512
1312	20.1	2.2	28.0	chr1	9482114	9482627	(239473795)	C	LTR47A	LTR/ERVL	(102)	350	1	13680
827	23.9	5.2	0.0	chr1	9482628	9482828	(239473594)	C	MIR	SINE/MIR	(37)	225	14	13682
252	30.2	13.8	0.8	chr1	10431043	10431162	(238525260)	+	MIRb	SINE/MIR	51	188	(80)	15780
15	15.5	2.6	2.6	chr1	10867222	10867259	(238089163)	+	G-rich	Low_complexity	1	39	(0)	16494
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
1721	1.9	0.0	0.0	chr1	12136898	12137102	(236819320)	C	SVA_B	Retroposon/SVA	(6)	1377	1173	19244
185	27.5	12.5	1.1	chr1	12604654	12604745	(236351677)	+	MIRb	SINE/MIR	14	117	(151)	20069
670	30.6	5.2	1.3	chr1	14590724	14590964	(234365458)	C	MIR	SINE/MIR	(10)	252	4	23475
1000	25.3	18.5	1.3	chr1	15196902	15197374	(233759048)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	13	24759
12	21.4	3.9	3.7	chr1	15524884	15524935	(233431487)	+	(CCCCGC)n	Simple_repeat	1	54	(0)	25467
613	29.0	1.2	0.0	chr1	16121041	16121209	(232835213)	+	MIR	SINE/MIR	90	260	(2)	26733
2263	20.2	3.7	6.1	chr1	16121245	16121517	(232834905)	C	L1MC3	LINE/L1	(503)	7282	7033	26734
183	26.2	0.0	0.0	chr1	16122921	16122962	(232833460)	+	MIR3	SINE/MIR	37	78	(130)	26736
322	31.8	21.4	0.7	chr1	16122967	16123240	(232833182)	+	L2c	LINE/L2	2821	3155	(232)	26737
13	16.9	0.0	0.0	chr1	16352430	16352456	(232603966)	+	(CGC)n	Simple_repeat	1	27	(0)	27273
17	23.9	3.1	4.5	chr1	16352475	16352538	(232603884)	+	(GC)n	Simple_repeat	1	66	(0)	27274
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
265	35.5	3.2	2.2	chr1	16903379	16903562	(232052860)	+	LTR39-int	LTR/ERV1	8502	8687	(357)	28223
508	29.9	5.3	8.7	chr1	16903668	16904000	(232052422)	+	LTR23-int	LTR/ERV1	4727	5047	(76)	28224
304	30.7	1.7	0.9	chr1	16904653	16904767	(232051655)	+	Charlie4a	DNA/hAT-Charlie	385	500	(8)	28227
314	23.2	7.9	1.2	chr1	17494167	17494249	(231462173)	+	L2a	LINE/L2	3106	3194	(181)	29546
199	29.4	1.4	6.8	chr1	17494292	17494364	(231462058)	+	L2a	LINE/L2	3298	3366	(21)	29546
1801	15.6	4.0	0.3	chr1	17537073	17537192	(231419230)	C	AluJr	SINE/Alu	(192)	120	2	29669
826	22.7	5.3	5.3	chr1	17537193	17537322	(231419100)	C	MER102a	DNA/hAT-Charlie	(209)	132	5	29668
213	33.9	5.1	9.1	chr1	17537405	17537690	(231418732)	C	L2b	LINE/L2	(48)	3327	3054	29671
1132	30.7	3.4	4.3	chr1	17787571	17788105	(231168317)	C	L1ME3G	LINE/L1	(354)	570	36	30230
1882	12.7	0.0	8.4	chr1	18622450	18622679	(230333743)	C	AluSz6	SINE/Alu	(17)	295	92	32073
2331	10.0	0.3	0.0	chr1	18622680	18622980	(230333442)	C	AluSx	SINE/Alu	(10)	302	1	32074
1936	16.1	1.3	0.3	chr1	20697326	20697629	(228258793)	+	AluJr	SINE/Alu	1	307	(5)	36368
245	28.7	12.8	3.4	chr1	21177346	21177493	(227778929)	C	MIRb	SINE/MIR	(45)	223	60	37303
455	31.8	8.1	4.8	chr1	21332928	21333178	(227623244)	C	MIRb	SINE/MIR	(0)	268	9	37691
25	17.0	3.8	4.8	chr1	21345380	21345459	(227610963)	+	(GCTCCCG)n	Simple_repeat	1	83	(0)	37717
259	31.3	11.8	0.7	chr1	21702734	21702884	(227253538)	+	MER3	DNA/hAT-Charlie	40	209	(0)	38479
892	17.7	9.5	3.7	chr1	21702885	21702938	(227253484)	C	MER3	DNA/hAT-Charlie	(143)	66	1	38480
310	31.7	14.9	1.8	chr1	21702940	21703319	(227253103)	+	L2a	LINE/L2	2976	3426	(0)	38478
565	32.6	5.8	0.4	chr1	22232081	22232308	(226724114)	C	MIRb	SINE/MIR	(17)	251	11	39688
986	20.9	11.4	5.6	chr1	22452359	22452678	(226503744)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	40207
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
1847	10.1	5.8	0.4	chr1	23169083	23169359	(225787063)	+	AluJb	SINE/Alu	7	299	(13)	41761
375	24.2	0.0	1.1	chr1	23169379	23169470	(225786952)	+	MIRb	SINE/MIR	178	268	(0)	41762
444	29.6	0.6	5.4	chr1	23169479	23169664	(225786758)	+	MIR3	SINE/MIR	17	193	(15)	41763
12	15.0	3.3	0.0	chr1	23344075	23344104	(225612318)	+	(CCACCC)n	Simple_repeat	1	31	(0)	42186
373	23.9	3.8	10.8	chr1	23405881	23406074	(225550348)	C	MER20B	DNA/hAT-Charlie	(607)	176	4	42334
311	30.8	11.9	0.0	chr1	23406108	23406211	(225550211)	C	MER117	DNA/hAT-Charlie	(49)	148	31	42335
431	27.1	5.7	2.7	chr1	23525371	23525556	(225430866)	+	MIRb	SINE/MIR	4	195	(73)	42639
294	29.5	6.2	11.4	chr1	23555708	23555948	(225400474)	+	MIRb	SINE/MIR	2	232	(36)	42733
2199	8.1	1.7	0.3	chr1	23637189	23637486	(225318936)	C	AluSg7	SINE/Alu	(6)	303	2	42957
396	31.1	1.3	1.3	chr1	23637688	23637837	(225318585)	C	MIRc	SINE/MIR	(65)	203	54	42958
717	29.9	15.9	2.1	chr1	24043209	24043690	(224912732)	+	L2a	LINE/L2	2710	3256	(170)	44000
490	16.1	0.0	0.0	chr1	24043699	24043779	(224912643)	C	AluJb	SINE/Alu	(10)	302	222	44001
562	27.5	2.6	0.0	chr1	24043781	24043929	(224912493)	C	L2	LINE/L2	(449)	2970	2818	44002
718	34.9	7.6	6.3	chr1	25681841	25682396	(223274026)	+	L3	LINE/CR1	2787	3350	(749)	47618
218	29.2	11.1	1.0	chr1	25820184	25820280	(223136142)	C	MIR1_Amn	SINE/MIR	(94)	136	29	47892
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
12	27.7	3.1	3.0	chr1	25859514	25859535	(223096887)	+	(CCGCC)n	Simple_repeat	1	66	(0)	47961
13	21.3	8.6	3.4	chr1	26280474	26280495	(222675927)	+	(CTGACC)n	Simple_repeat	1	34	(54)	48974
16	8.2	0.0	0.0	chr1	26280496	26280521	(222675901)	+	(CCTCC)n	Simple_repeat	1	26	(0)	48975
13	21.3	8.6	3.4	chr1	26280522	26280554	(222675868)	+	(CTGACC)n	Simple_repeat	35	88	(0)	48974
328	24.8	19.5	1.9	chr1	26318821	26318976	(222637446)	C	MIRc	SINE/MIR	(35)	233	44	49056
229	33.6	3.7	5.7	chr1	26366392	26366541	(222589881)	C	L2c	LINE/L2	(0)	3387	3214	49163
331	28.8	11.0	0.0	chr1	26366520	26366665	(222589757)	C	MIRc	SINE/MIR	(78)	190	27	49164
2364	6.2	0.3	0.3	chr1	26366666	26366955	(222589467)	C	AluY	SINE/Alu	(21)	290	1	49165
200	25.0	7.7	0.0	chr1	26900635	26900694	(222055728)	+	MIR	SINE/MIR	128	192	(70)	50397
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
18	0.0	0.0	0.0	chr1	27155281	27155300	(221801122)	+	(A)n	Simple_repeat	1	20	(0)	51052
549	27.6	5.0	0.0	chr1	27155433	27155584	(221800838)	+	MIR	SINE/MIR	72	231	(31)	51053
14	18.4	2.7	0.0	chr1	27392530	27392566	(221563856)	+	(GCCGC)n	Simple_repeat	1	38	(0)	51639
639	22.1	1.5	0.0	chr1	27530030	27530160	(221426262)	+	MER5B	DNA/hAT-Charlie	18	150	(28)	51970
1173	12.9	0.6	0.0	chr1	27530255	27530424	(221425998)	C	AluSx3	SINE/Alu	(2)	309	139	51971
770	21.8	6.3	1.6	chr1	27579650	27579831	(221376591)	+	MER58A	DNA/hAT-Charlie	1	191	(33)	52058
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
2142	11.2	0.0	3.3	chr1	28285852	28286156	(220670266)	+	AluSq2	SINE/Alu	1	295	(18)	53758
352	27.4	0.0	6.7	chr1	28286351	28286440	(220669982)	C	L2b	LINE/L2	(37)	3350	3239	53759
2353	10.1	0.3	0.7	chr1	28286465	28286770	(220669652)	C	AluSx	SINE/Alu	(5)	307	3	53760
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
181	10.0	3.2	0.0	chr1	28510632	28510661	(220445761)	C	L2a	LINE/L2	(28)	3398	3368	54384
470	31.2	5.6	5.2	chr1	28755348	28755580	(220200842)	C	MIR	SINE/MIR	(0)	262	29	55059
1109	16.4	9.3	0.0	chr1	28755716	28755929	(220200493)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	55060
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
614	28.6	8.7	0.9	chr1	29182217	29182438	(219773984)	+	MIRb	SINE/MIR	28	268	(0)	56089
16	22.7	3.6	3.5	chr1	29237289	29237343	(219719079)	+	(GT)n	Simple_repeat	1	57	(0)	56235
16	22.6	0.0	0.0	chr1	29237551	29237583	(219718839)	+	(GT)n	Simple_repeat	1	33	(0)	56236
501	34.1	8.2	5.4	chr1	30824919	30825613	(218130809)	C	L2c	LINE/L2	(0)	3387	2660	59163
2213	19.7	3.5	0.2	chr1	31041451	31041862	(217914560)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	59623
285	28.4	10.5	0.0	chr1	31054964	31055065	(217901357)	+	MIRb	SINE/MIR	123	236	(32)	59657
201	25.2	8.0	5.5	chr1	31063238	31063346	(217893076)	+	MIRc	SINE/MIR	127	238	(30)	59677
203	31.5	10.5	0.0	chr1	31155650	31155760	(217800662)	+	MIRc	SINE/MIR	93	216	(52)	59977
263	24.4	8.4	6.4	chr1	31170752	31170891	(217785531)	C	MIR3	SINE/MIR	(10)	198	56	60028
256	26.3	3.8	2.6	chr1	31215980	31216057	(217740365)	C	MIR	SINE/MIR	(169)	93	15	60146
424	26.6	2.6	0.9	chr1	32291676	32291811	(216664611)	+	MIR3	SINE/MIR	37	170	(38)	62538
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
5942	8.2	2.1	5.5	chr1	32812989	32813323	(216143099)	+	MER4D0	LTR/ERV1	515	859	(13)	63794
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
16	21.7	0.0	2.2	chr1	33374383	33374427	(215581995)	+	G-rich	Low_complexity	1	45	(0)	64984
460	23.0	20.2	1.1	chr1	33374700	33374879	(215581543)	+	MIRb	SINE/MIR	17	239	(29)	64985
571	24.8	10.0	0.0	chr1	35564979	35565131	(213391291)	C	MIR	SINE/MIR	(72)	190	21	68986
13	11.6	12.2	1.8	chr1	35883203	35883251	(213073171)	+	(CTGGCAG)n	Simple_repeat	1	55	(0)	69699
242	19.8	3.4	7.5	chr1	35930088	35930180	(213026242)	C	L2a	LINE/L2	(1)	3425	3337	69779
188	33.3	4.9	0.0	chr1	35930475	35930552	(213025870)	C	L2	LINE/L2	(528)	2891	2810	69780
15	26.6	3.5	0.0	chr1	36156163	36156220	(212800202)	+	G-rich	Low_complexity	1	60	(0)	70247
296	32.3	15.3	0.8	chr1	36387227	36387354	(212569068)	+	MIRb	SINE/MIR	40	189	(79)	70750
331	25.6	6.5	6.5	chr1	36397465	36397602	(212558820)	+	MIRc	SINE/MIR	11	148	(120)	70781
7043	15.9	6.1	3.6	chr1	36400551	36401780	(212554642)	C	LTR2752	LTR/ERV1	(0)	1263	1	70791
1500	24.0	4.1	7.7	chr1	36401794	36402309	(212554113)	C	MER52D	LTR/ERV1	(1158)	965	4	70792
872	19.4	3.6	8.5	chr1	37440626	37440742	(211515680)	+	L2a	LINE/L2	2820	2934	(485)	72735
189	25.0	15.8	3.0	chr1	37440820	37440951	(211515471)	+	L2a	LINE/L2	3106	3262	(164)	72735
1961	4.5	11.2	0.0	chr1	37690016	37690284	(211266138)	C	AluSx1	SINE/Alu	(9)	303	1	73248
504	23.8	9.8	5.3	chr1	38784656	38784850	(210171572)	+	MIRb	SINE/MIR	61	258	(10)	75327
1958	17.1	0.0	0.7	chr1	38784856	38785165	(210171257)	+	AluJo	SINE/Alu	1	308	(4)	75328
354	32.2	2.8	5.0	chr1	38785349	38785567	(210170855)	C	MamRep434	DNA/TcMar-Tigger	(154)	272	59	75329
732	23.3	10.4	4.9	chr1	38785727	38786230	(210170192)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	1	75330
16	8.3	0.0	0.0	chr1	38859678	38859703	(210096719)	+	(CAGGC)n	Simple_repeat	1	26	(0)	75457
32	22.4	2.3	6.1	chr1	38859704	38859783	(210096639)	+	(GCC)n	Simple_repeat	28	131	(0)	75456
7609	12.6	3.2	2.5	chr1	38968601	38969498	(209986924)	C	Tigger2	DNA/TcMar-Tigger	(664)	2054	1144	75738
636	34.6	9.1	8.1	chr1	38986189	38986774	(209969648)	+	L2c	LINE/L2	2709	3362	(13)	75792
266	22.6	0.0	0.0	chr1	38986933	38986985	(209969437)	+	L4_B_Mam	LINE/RTE-X	4154	4206	(735)	75794
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
492	26.0	2.9	0.4	chr1	39799888	39800055	(209156367)	+	MIR	SINE/MIR	81	261	(7)	77430
394	21.2	13.7	2.2	chr1	39800215	39800349	(209156073)	C	L1MC	LINE/L1	(2909)	3237	3085	77431
13	28.4	1.8	1.7	chr1	39937021	39937077	(209019345)	+	(AGCTTAG)n	Simple_repeat	1	58	(0)	77741
26	0.0	0.0	0.0	chr1	39937079	39937103	(209019319)	+	(CCCAG)n	Simple_repeat	1	25	(0)	77742
15	27.1	6.8	0.0	chr1	39937113	39937185	(209019237)	+	A-rich	Low_complexity	1	78	(0)	77743
23	34.2	4.8	1.1	chr1	39937213	39937378	(209019044)	+	(CAGAACC)n	Simple_repeat	1	174	(0)	77744
786	18.1	9.8	0.6	chr1	41360624	41360790	(207595632)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	80666
199	22.1	2.2	0.6	chr1	41360857	41360917	(207595505)	C	MIRc	SINE/MIR	(191)	77	11	80667
616	26.5	2.7	10.5	chr1	41495877	41496146	(207460276)	+	MIR	SINE/MIR	7	255	(13)	80919
186	31.3	8.8	2.9	chr1	41496848	41496985	(207459437)	+	MIR1_Amn	SINE/MIR	25	171	(59)	80920
390	28.2	3.7	5.2	chr1	41516381	41516571	(207439851)	+	L2a	LINE/L2	2485	2672	(747)	80956
274	35.1	12.0	1.6	chr1	41516649	41517082	(207439340)	+	L2a	LINE/L2	2942	3426	(0)	80956
299	34.7	4.5	0.7	chr1	41538936	41539086	(207417336)	+	Charlie15a	DNA/hAT-Charlie	68	224	(0)	80978
344	27.9	11.2	5.9	chr1	42052403	42052604	(206903818)	+	UCON99	DNA	114	327	(44)	81862
598	28.9	12.8	0.9	chr1	42179879	42180105	(206776317)	C	MIRb	SINE/MIR	(3)	265	8	82063
426	26.4	7.6	0.8	chr1	42180151	42180272	(206776150)	+	Tigger9a	DNA/TcMar-Tigger	1	131	(601)	82064
13	17.4	5.3	5.0	chr1	42334856	42334912	(206621510)	+	(AGGCCCC)n	Simple_repeat	1	60	(0)	82309
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
220	32.6	4.7	6.0	chr1	42462787	42462936	(206493486)	C	MIR3	SINE/MIR	(37)	171	24	82556
229	27.4	0.0	0.0	chr1	42846090	42846151	(206110271)	+	MIR3	SINE/MIR	141	202	(6)	83267
19	19.0	0.0	0.0	chr1	43358713	43358754	(205597668)	+	(GCCCC)n	Simple_repeat	1	42	(0)	84214
647	34.0	5.6	3.7	chr1	43396125	43396420	(205560002)	+	L3	LINE/CR1	3579	3880	(219)	84257
221	31.0	8.3	1.0	chr1	43666813	43666913	(205289509)	C	MIRb	SINE/MIR	(119)	149	41	84683
309	27.9	9.2	0.1	chr1	43836825	43836942	(205119480)	C	MIR3	SINE/MIR	(99)	169	40	85015
13	24.9	0.0	0.0	chr1	43946812	43946849	(205009573)	+	(GCCGG)n	Simple_repeat	1	38	(0)	85206
12	27.1	2.3	0.0	chr1	43974948	43974991	(204981431)	+	(GGAC)n	Simple_repeat	1	45	(0)	85234
13	13.5	0.0	7.9	chr1	43975003	43975040	(204981382)	+	(CCG)n	Simple_repeat	1	38	(0)	85235
2860	16.9	2.3	0.4	chr1	44388406	44388873	(204567549)	C	MLT2B2	LTR/ERVL	(38)	477	1	85936
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
2233	10.0	1.6	0.7	chr1	44689054	44689362	(204267060)	C	AluSx1	SINE/Alu	(0)	312	1	86492
24	15.2	0.0	3.6	chr1	44775763	44775817	(204180605)	+	G-rich	Low_complexity	1	55	(0)	86689
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
278	25.0	8.0	1.9	chr1	45037475	45037580	(203918842)	+	L2c	LINE/L2	3225	3337	(50)	87234
17	20.6	4.0	0.0	chr1	45206721	45206770	(203749652)	+	(CGCC)n	Simple_repeat	1	52	(0)	87512
13	21.9	0.0	2.6	chr1	45303630	45303668	(203652754)	+	(GGAGCC)n	Simple_repeat	1	39	(0)	87710
487	35.9	11.5	5.2	chr1	45355976	45356351	(203600071)	C	L2a	LINE/L2	(556)	2863	2473	87786
1597	15.1	7.3	2.5	chr1	45356352	45356636	(203599786)	+	AluJo	SINE/Alu	1	300	(12)	87787
2265	25.2	7.8	7.1	chr1	45374733	45375616	(203580806)	+	L2a	LINE/L2	2406	3319	(107)	87836
1062	32.0	14.6	6.6	chr1	45875459	45876481	(203079941)	C	L2b	LINE/L2	(575)	2844	1710	88950
621	25.6	8.6	7.5	chr1	46304685	46304879	(202651543)	C	MIR	SINE/MIR	(66)	196	4	89754
20	6.7	0.0	2.9	chr1	46489707	46489740	(202466682)	+	(GCGGG)n	Simple_repeat	1	34	(0)	90134
12	24.2	5.5	1.7	chr1	46489857	46489911	(202466511)	+	(GGCCG)n	Simple_repeat	1	58	(0)	90135
792	30.8	17.0	2.9	chr1	46528762	46529728	(202426694)	+	L2a	LINE/L2	2293	3426	(0)	90200
917	18.3	12.4	7.6	chr1	46691190	46691426	(202264996)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	236	90487
19	12.1	0.0	2.6	chr1	47333870	47333907	(201622515)	+	(CCCGC)n	Simple_repeat	1	38	(0)	91369
26	18.6	3.1	6.1	chr1	47508214	47508309	(201448113)	+	G-rich	Low_complexity	1	99	(0)	91745
429	21.4	22.4	2.9	chr1	47650162	47650371	(201306051)	C	MER5C1	DNA/hAT-Charlie	(6)	257	6	92039
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
296	18.4	0.0	0.0	chr1	50189661	50189709	(198766713)	C	Tigger16a	DNA/TcMar-Tigger	(101)	856	808	96301
399	32.5	7.9	0.6	chr1	50189726	50189889	(198766533)	C	MIRb	SINE/MIR	(21)	247	71	96302
276	22.1	2.3	0.0	chr1	50333392	50333477	(198622945)	C	MIRc	SINE/MIR	(136)	132	45	96596
15	17.8	9.0	2.7	chr1	51506784	51506850	(197449572)	+	(CAGAA)n	Simple_repeat	1	73	(0)	98805
219	35.9	3.7	0.0	chr1	51877557	51877634	(197078788)	+	L3	LINE/CR1	3952	4032	(67)	99628
400	33.3	19.2	1.1	chr1	51877641	51878001	(197078421)	C	L3	LINE/CR1	(3)	4096	3655	99629
12	23.2	0.0	4.5	chr1	51878751	51878794	(197077628)	+	(CCCTCCG)n	Simple_repeat	1	44	(0)	99630
14	18.9	0.0	2.6	chr1	51990620	51990657	(196965765)	+	G-rich	Low_complexity	1	38	(0)	99906
224	26.8	0.0	0.0	chr1	52404101	52404156	(196552266)	+	L2a	LINE/L2	3371	3426	(0)	100775
12	16.9	2.9	2.8	chr1	52843544	52843583	(196112839)	+	(GTCCC)n	Simple_repeat	1	40	(0)	101893
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
30	0.0	0.0	0.0	chr1	54407750	54407777	(194548645)	+	(T)n	Simple_repeat	1	28	(0)	105002
277	29.3	1.7	0.0	chr1	55429009	55429089	(193527333)	+	MIRc	SINE/MIR	37	122	(86)	107098
574	24.4	2.2	4.9	chr1	56531688	56531872	(192424550)	+	MIRb	SINE/MIR	27	206	(62)	109029
208	25.6	14.0	2.5	chr1	56571115	56571234	(192385188)	+	MIR3	SINE/MIR	23	158	(50)	109104
378	26.5	13.8	4.0	chr1	56571247	56571473	(192384949)	C	MIRb	SINE/MIR	(1)	261	3	109105
18	26.9	1.4	2.8	chr1	56645567	56645637	(192310785)	+	G-rich	Low_complexity	1	72	(0)	109246
248	29.3	5.4	3.1	chr1	56645692	56645853	(192310569)	+	MIR3	SINE/MIR	22	187	(21)	109247
490	29.0	9.5	6.4	chr1	56645910	56646101	(192310321)	C	MIRb	SINE/MIR	(35)	233	43	109248
14	5.8	10.5	2.4	chr1	58816594	58816631	(190139791)	+	(CAGTCCT)n	Simple_repeat	1	42	(0)	113581
239	25.8	18.1	0.5	chr1	58870078	58870173	(190086249)	+	MIRb	SINE/MIR	53	162	(46)	113703
186	29.4	5.2	5.2	chr1	59078054	59078168	(189878254)	C	MIR	SINE/MIR	(29)	233	119	114145
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
189	20.0	2.8	0.0	chr1	61172692	61172726	(187783696)	C	X6A_LINE	LINE/CR1	(14)	1066	1031	117770
614	17.8	10.4	1.8	chr1	61504884	61505049	(187451373)	+	MER5A	DNA/hAT-Charlie	1	182	(7)	118265
289	32.8	5.4	1.6	chr1	61505052	61505175	(187451247)	C	MIR3	SINE/MIR	(36)	172	44	118266
260	27.7	21.0	0.7	chr1	62384654	62384796	(186571626)	C	MIRb	SINE/MIR	(8)	260	77	120136
262	23.1	3.0	0.0	chr1	62384950	62385014	(186571408)	C	L4_C_Mam	LINE/RTE-X	(171)	4967	4901	120137
294	28.3	3.9	0.0	chr1	62386840	62386938	(186569484)	+	MIR3	SINE/MIR	78	180	(28)	120141
243	34.5	2.6	0.9	chr1	62386923	62387036	(186569386)	C	MER5A	DNA/hAT-Charlie	(6)	183	68	120142
502	27.8	3.1	5.6	chr1	63272643	63272840	(185683582)	C	MIRc	SINE/MIR	(69)	199	7	121731
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
225	24.1	11.3	0.2	chr1	63773691	63773791	(185182631)	+	MIR3	SINE/MIR	38	149	(81)	122679
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
653	29.2	11.0	0.0	chr1	63835119	63835320	(185121102)	+	MIRb	SINE/MIR	20	246	(22)	122797
207	28.6	0.0	1.6	chr1	63835436	63835499	(185120923)	C	L2c	LINE/L2	(42)	3345	3283	122798
329	25.5	15.7	5.6	chr1	64039838	64039945	(184916477)	+	MER131	DNA?	23	143	(72)	123184
676	28.0	2.9	1.8	chr1	64229390	64229615	(184726807)	C	MIRb	SINE/MIR	(29)	233	4	123517
193	30.6	1.6	1.6	chr1	64506205	64506267	(184450155)	C	L2b	LINE/L2	(7)	3368	3306	124012
347	23.8	11.6	0.0	chr1	64506310	64506393	(184450029)	C	MIRb	SINE/MIR	(2)	266	172	124013
630	25.3	8.2	1.6	chr1	64506405	64506597	(184449825)	C	MIR	SINE/MIR	(16)	246	40	124014
289	20.8	0.0	0.0	chr1	64516450	64516497	(184439925)	+	L2b	LINE/L2	3313	3360	(15)	124029
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	18.9	2.8	0.0	chr1	64745015	64745050	(184211372)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	124431
296	23.4	1.7	11.3	chr1	66360017	66360192	(182596230)	C	MER5A1	DNA/hAT-Charlie	(3)	163	2	127104
2863	16.5	8.1	15.8	chr1	66542007	66542771	(182413651)	C	MER44D	DNA/TcMar-Tigger	(0)	705	5	127375
543	28.6	3.9	4.5	chr1	66542772	66542906	(182413516)	C	MIRc	SINE/MIR	(112)	156	22	127374
482	26.4	14.2	0.0	chr1	66543679	66543860	(182412562)	+	MIRc	SINE/MIR	2	213	(55)	127377
283	26.4	9.4	1.9	chr1	67683288	67683395	(181273027)	C	L2b	LINE/L2	(0)	3375	3259	129411
340	24.4	8.7	3.4	chr1	67717001	67717119	(181239303)	C	MER5A1	DNA/hAT-Charlie	(4)	162	37	129460
580	29.3	7.0	1.8	chr1	67719613	67719841	(181236581)	C	MIRb	SINE/MIR	(0)	268	27	129466
190	32.8	6.5	4.9	chr1	67750437	67750558	(181205864)	+	L2a	LINE/L2	3293	3416	(10)	129516
1068	23.5	1.5	10.6	chr1	68379116	68379491	(180576931)	+	MLT1E2-int	LTR/ERVL-MaLR	843	1183	(306)	130571
2337	9.4	0.7	0.3	chr1	70419995	70420292	(178536130)	C	AluSx	SINE/Alu	(13)	299	1	133401
1779	12.6	4.1	16.0	chr1	70420293	70420639	(178535783)	C	MER1B	DNA/hAT-Charlie	(33)	306	1	133400
11686	18.6	2.3	2.3	chr1	75373127	75375824	(173580598)	+	L1PA17	LINE/L1	4	2730	(4205)	139866
12656	15.4	4.8	0.9	chr1	77604960	77607065	(171349357)	+	L1MA9	LINE/L1	11	2200	(5365)	143172
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
206	31.7	7.9	0.0	chr1	77762240	77762321	(171194101)	C	MER91C	DNA/hAT-Tip100	(16)	124	36	143437
16	0.0	0.0	0.0	chr1	77779447	77779464	(171176958)	+	(T)n	Simple_repeat	1	18	(0)	143483
2356	10.8	0.0	0.6	chr1	77780895	77781208	(171175214)	C	AluSx1	SINE/Alu	(0)	312	1	143487
18	7.7	0.0	0.0	chr1	77888599	77888626	(171067796)	+	(CGG)n	Simple_repeat	1	28	(0)	143695
286	23.7	9.3	6.1	chr1	78003766	78003994	(170952428)	+	L1ME4a	LINE/L1	5884	6120	(4)	143905
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
659	27.0	0.0	1.2	chr1	80825203	80825367	(168131055)	+	UCON62	DNA?	4	166	(11)	147640
295	35.0	8.6	8.6	chr1	81029173	81029448	(167926974)	+	L2a	LINE/L2	3016	3307	(119)	147893
1079	20.2	2.3	0.9	chr1	81029449	81029663	(167926759)	+	MER20	DNA/hAT-Charlie	1	218	(1)	147898
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
1470	21.0	4.9	4.6	chr1	85050415	85050803	(163905619)	+	L1M5	LINE/L1	4502	4891	(1255)	153511
1071	21.4	7.9	0.0	chr1	85050805	85051071	(163905351)	C	MER99	DNA/hAT?	(133)	698	409	153512
2267	12.2	0.0	0.0	chr1	85051073	85051376	(163905046)	C	AluSx	SINE/Alu	(8)	304	1	153513
285	24.2	5.0	8.7	chr1	85202726	85202829	(163753593)	+	L2a	LINE/L2	3327	3426	(0)	153787
366	29.4	6.0	0.0	chr1	85275000	85275125	(163681297)	+	MIR	SINE/MIR	105	238	(24)	153914
309	24.2	13.9	5.8	chr1	85275153	85275323	(163681099)	+	L2a	LINE/L2	3234	3420	(6)	153915
698	23.0	8.0	0.5	chr1	85279066	85279262	(163677160)	C	L2a	LINE/L2	(547)	2872	2660	153924
18	4.8	0.0	0.0	chr1	85297911	85297932	(163658490)	+	(AC)n	Simple_repeat	1	22	(0)	153966
73	1.5	0.0	0.0	chr1	85580533	85580599	(163375823)	+	(AC)n	Simple_repeat	1	67	(0)	154403
323	35.3	3.6	0.0	chr1	86778847	86778979	(162177443)	C	MIRb	SINE/MIR	(118)	150	13	156084
225	26.8	18.0	2.4	chr1	86778990	86779115	(162177307)	C	L2b	LINE/L2	(4)	3422	3273	156085
450	28.6	12.2	1.8	chr1	86779120	86779354	(162177068)	+	MIR	SINE/MIR	2	262	(6)	156086
254	35.5	5.5	1.4	chr1	86779756	86779910	(162176512)	+	MIRc	SINE/MIR	9	169	(99)	156087
37	0.0	0.0	0.0	chr1	86828037	86828068	(162128354)	+	(CA)n	Simple_repeat	1	32	(0)	156164
716	21.2	12.9	8.0	chr1	86828069	86828102	(162128320)	+	MER5C	DNA/hAT-Charlie	273	304	(9)	156163
632	23.2	5.6	0.0	chr1	86828140	86828307	(162128115)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	156165
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
337	36.6	12.3	0.0	chr1	87851695	87851880	(161104542)	C	MIRb	SINE/MIR	(34)	234	23	157673
358	26.4	12.9	3.3	chr1	87852178	87852330	(161104092)	+	Tigger16a	DNA/TcMar-Tigger	788	957	(0)	157674
234	26.0	2.5	3.8	chr1	88145792	88145871	(160810551)	+	UCON105	Unknown	179	257	(16)	158085
497	36.6	5.9	6.8	chr1	88146026	88146438	(160809984)	+	L2b	LINE/L2	2955	3363	(12)	158086
727	33.0	5.0	5.9	chr1	89359026	89359650	(159596772)	C	L1MA10	LINE/L1	(5)	2772	2154	159767
774	30.3	6.4	4.6	chr1	89359651	89360082	(159596340)	C	L1MA10	LINE/L1	(1012)	7030	6675	159767
2836	26.5	11.7	2.2	chr1	89701763	89702452	(159253970)	+	L1MEi	LINE/L1	67	827	(1385)	160209
245	19.3	3.3	1.7	chr1	89710162	89710231	(159246191)	+	MIRc	SINE/MIR	159	222	(46)	160223
12	19.6	2.9	0.0	chr1	89720098	89720132	(159236290)	+	(GTGAGT)n	Simple_repeat	1	36	(0)	160234
2519	9.7	0.0	0.3	chr1	89889906	89890216	(159066206)	+	AluY	SINE/Alu	1	310	(1)	160496
281	29.1	6.4	0.0	chr1	89890239	89890355	(159066067)	+	Tigger15a	DNA/TcMar-Tigger	412	536	(179)	160497
247	31.3	10.8	5.0	chr1	89987585	89987705	(158968717)	C	L2b	LINE/L2	(5)	3370	3242	160675
12	17.6	7.7	0.0	chr1	90718004	90718042	(158238380)	+	(CCAGCG)n	Simple_repeat	1	42	(0)	161678
23	15.2	6.7	5.3	chr1	90718043	90718086	(158238336)	+	(CCGCGC)n	Simple_repeat	11	95	(0)	161677
13	24.6	2.3	0.0	chr1	90718250	90718292	(158238130)	+	G-rich	Low_complexity	1	44	(0)	161679
971	19.5	1.1	0.0	chr1	91732303	91732487	(157223935)	C	MER5A	DNA/hAT-Charlie	(1)	188	2	163160
416	29.7	6.3	2.6	chr1	92087575	92087726	(156868696)	C	L2c	LINE/L2	(69)	3318	3161	163862
1516	19.5	4.4	0.3	chr1	92804657	92804960	(156151462)	C	MER65D	LTR/ERV1	(0)	473	157	165127
441	25.5	8.5	1.8	chr1	92960438	92960601	(155995821)	C	MamSINE1	SINE/tRNA-RTE	(24)	266	91	165427
375	33.0	6.5	2.2	chr1	93078243	93078577	(155877845)	+	X7C_LINE	LINE/CR1	3	234	(33)	165674
13	4.1	3.7	3.6	chr1	93179890	93179916	(155776506)	+	(GCCTC)n	Simple_repeat	1	28	(0)	165854
972	12.1	0.0	1.4	chr1	93181035	93181174	(155775248)	+	FLAM_C	SINE/Alu	1	138	(5)	165856
305	28.0	3.3	2.5	chr1	93848110	93848230	(155108192)	C	MER5A	DNA/hAT-Charlie	(16)	173	52	166927
815	23.9	9.3	3.0	chr1	94226306	94226540	(154729882)	C	MIR	SINE/MIR	(3)	265	2	167478
229	34.0	5.4	1.9	chr1	94228430	94228537	(154727885)	C	MIR3	SINE/MIR	(95)	113	2	167480
252	27.8	10.8	1.8	chr1	94228614	94228723	(154727699)	+	MIRc	SINE/MIR	132	252	(16)	167481
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
2106	13.8	4.1	0.9	chr1	94422178	94422505	(154533917)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	167767
434	32.0	7.2	5.2	chr1	94422506	94422629	(154533793)	+	L2c	LINE/L2	3204	3337	(50)	167766
1011	27.0	4.8	1.1	chr1	94525003	94525283	(154431139)	C	LTR33C	LTR/ERVL	(328)	301	10	167921
1631	29.8	6.3	5.5	chr1	94525334	94526129	(154430293)	C	L2	LINE/L2	(592)	2827	2025	167922
931	27.8	10.1	7.5	chr1	94816686	94817302	(154139120)	C	L1MEh	LINE/L1	(3381)	2938	2273	168357
780	21.4	15.7	8.0	chr1	94817303	94817541	(154138881)	+	MIR	SINE/MIR	2	262	(0)	168361
444	20.2	14.2	9.2	chr1	94854705	94854875	(154101547)	+	MER20	DNA/hAT-Charlie	1	154	(65)	168415
540	26.3	13.9	4.2	chr1	95042674	95043244	(153913178)	C	HAL1	LINE/L1	(1035)	1472	838	168745
881	19.0	1.1	4.1	chr1	95043284	95043480	(153912942)	+	MER20	DNA/hAT-Charlie	28	218	(1)	168746
17	18.9	2.9	7.0	chr1	96721667	96721735	(152234687)	+	(CGC)n	Simple_repeat	1	71	(0)	171072
310	27.6	17.4	4.5	chr1	100188560	100188847	(148767575)	C	L3b	LINE/CR1	(138)	5094	4762	176128
623	19.6	8.7	2.5	chr1	100360906	100361067	(148595355)	+	Tigger19b	DNA/TcMar-Tigger	306	478	(72)	176458
920	15.4	7.8	1.3	chr1	100895397	100895552	(148060870)	+	AluJb	SINE/Alu	137	303	(9)	177179
600	20.0	18.7	0.6	chr1	100963631	100963801	(147992621)	+	MER3	DNA/hAT-Charlie	1	209	(0)	177275
759	31.1	15.0	3.1	chr1	100963802	100964215	(147992207)	C	L2a	LINE/L2	(1630)	1789	1298	177273
996	19.1	3.1	4.8	chr1	101282328	101282558	(147673864)	C	Charlie10a	DNA/hAT-Charlie	(29)	251	25	177807
476	31.7	3.9	1.0	chr1	101282650	101282850	(147673572)	+	L2	LINE/L2	2713	2919	(500)	177808
474	21.6	1.9	8.9	chr1	101291041	101291152	(147665270)	+	MER5A	DNA/hAT-Charlie	19	122	(67)	177829
509	27.8	11.7	4.5	chr1	107702845	107703066	(141253356)	C	MIRb	SINE/MIR	(18)	250	11	185799
445	23.2	1.9	1.5	chr1	108963593	108963725	(139992697)	C	Charlie15b	DNA/hAT-Charlie	(16)	1045	926	187650
2047	11.0	1.0	6.0	chr1	109227620	109227938	(139728484)	+	AluSz	SINE/Alu	1	303	(9)	188274
2358	26.0	12.9	3.5	chr1	110001532	110003477	(138952945)	+	L1MC4	LINE/L1	6353	8040	(2)	189415
505	27.9	7.2	6.2	chr1	110647401	110647660	(138308762)	C	MER121	DNA/hAT?	(100)	301	39	190523
5276	18.1	6.1	1.4	chr1	112549415	112550356	(136406066)	C	L1M4	LINE/L1	(1604)	4542	3555	193291
504	32.3	3.0	3.5	chr1	112637101	112637302	(136319120)	+	MIRc	SINE/MIR	46	246	(22)	193482
197	19.2	22.0	0.0	chr1	112637298	112637375	(136319047)	C	L2a	LINE/L2	(0)	3426	3327	193483
900	16.9	8.2	5.0	chr1	112637387	112637435	(136318987)	+	MER58B	DNA/hAT-Charlie	1	44	(297)	193484
2044	17.0	0.0	1.6	chr1	112637436	112637752	(136318670)	C	AluJo	SINE/Alu	(0)	312	1	193485
845	22.9	14.6	2.8	chr1	113010133	113010384	(135946038)	+	L1MC4	LINE/L1	6534	6820	(1222)	194264
2162	9.5	0.3	0.3	chr1	113010385	113010694	(135945728)	C	AluSq2	SINE/Alu	(0)	313	1	194265
1355	19.9	6.0	3.1	chr1	113786301	113786686	(135169736)	+	MLT1D	LTR/ERVL-MaLR	1	468	(37)	195513
16	0.0	0.0	0.0	chr1	113804908	113804924	(135151498)	+	(A)n	Simple_repeat	1	17	(0)	195547
13	23.4	6.0	0.0	chr1	114511170	114511219	(134445203)	+	(GAGC)n	Simple_repeat	1	53	(0)	196725
18	14.9	2.6	2.5	chr1	114511211	114511249	(134445173)	+	(GC)n	Simple_repeat	1	40	(0)	196726
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
1007	18.3	2.0	1.5	chr1	117148284	117148483	(131807939)	+	MIR	SINE/MIR	58	258	(4)	200827
190	39.0	2.0	0.0	chr1	117148520	117148619	(131807803)	+	L2	LINE/L2	2312	2413	(1006)	200828
326	21.5	9.0	0.0	chr1	117857610	117857708	(131098714)	C	MIR	SINE/MIR	(46)	162	54	201909
452	27.3	9.5	0.7	chr1	117857713	117857856	(131098566)	C	MER5A1	DNA/hAT-Charlie	(7)	159	2	201910
339	32.3	10.8	3.9	chr1	118159338	118159543	(130796879)	+	MIRc	SINE/MIR	43	264	(4)	202388
862	29.4	3.5	7.4	chr1	119318787	119319138	(129637284)	+	MLT1I	LTR/ERVL-MaLR	68	405	(6)	203958
397	34.8	1.9	1.9	chr1	121484013	121484170	(127472252)	+	ERVL-E-int	LTR/ERVL	3314	3471	(2196)	207122
1337	27.6	10.8	7.0	chr1	121484168	121484914	(127471508)	+	ERV3-16A3_I-int	LTR/ERVL	850	1628	(3598)	207123
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1611	15.6	2.4	4.6	chr1	145979986	145980287	(102976135)	+	AluJr	SINE/Alu	4	298	(14)	211867
2402	8.6	0.3	1.0	chr1	145987285	145987597	(102968825)	C	AluSx	SINE/Alu	(1)	311	1	211878
811	17.4	3.9	0.7	chr1	145990823	145990971	(102965451)	C	AluJr4	SINE/Alu	(0)	312	159	211887
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
666	0.0	0.0	0.0	chr1	146037061	146037132	(102919290)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	211991
637	2.8	0.0	0.0	chr1	146038044	146038115	(102918307)	+	tRNA-His-CAY_	tRNA	1	72	(3)	211993
1391	13.4	6.5	6.5	chr1	146038261	146038383	(102918039)	+	AluJb	SINE/Alu	1	125	(187)	211994
2616	5.3	0.0	0.0	chr1	146038384	146038685	(102917737)	C	AluSg	SINE/Alu	(8)	302	1	211995
1391	13.4	6.5	6.5	chr1	146038686	146038852	(102917570)	+	AluJb	SINE/Alu	127	291	(21)	211994
654	1.4	0.0	0.0	chr1	148265108	148265179	(100691243)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	215393
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
20	23.9	0.0	0.0	chr1	150163397	150163441	(98792981)	+	(AC)n	Simple_repeat	1	45	(0)	218432
6157	9.8	0.6	2.4	chr1	150395809	150396658	(98559764)	C	L1PB1	LINE/L1	(462)	5689	4848	218955
15	15.3	3.5	0.0	chr1	151047687	151047715	(97908707)	+	(CG)n	Simple_repeat	1	30	(0)	220393
2488	7.4	0.0	0.0	chr1	151063416	151063724	(97892698)	C	AluYk3	SINE/Alu	(2)	309	1	220410
17	6.0	8.6	0.0	chr1	151190417	151190451	(97765971)	+	(ATTTAT)n	Simple_repeat	1	38	(0)	220685
13	18.3	2.6	2.5	chr1	151254877	151254915	(97701507)	+	G-rich	Low_complexity	1	40	(0)	220826
270	27.3	7.5	4.8	chr1	151809715	151809818	(97146604)	+	L2a	LINE/L2	3302	3408	(18)	221922
201	28.7	12.8	1.8	chr1	152029199	152029365	(96927057)	+	L2	LINE/L2	2579	2766	(653)	222284
668	1.4	0.0	0.0	chr1	153671250	153671323	(95285099)	+	tRNA-Met-i	tRNA	1	74	(1)	224506
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
2244	11.7	0.0	0.9	chr1	154526895	154527210	(94429212)	C	AluSq2	SINE/Alu	(0)	313	1	226367
242	25.7	1.5	0.0	chr1	154527211	154527275	(94429147)	C	MER2	DNA/TcMar-Tigger	(267)	69	1	226368
722	30.2	5.4	7.3	chr1	154527276	154527765	(94428657)	+	L1M5	LINE/L1	4774	5253	(893)	226361
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
12	12.6	0.0	3.6	chr1	155250854	155250881	(93705541)	+	(GCCTG)n	Simple_repeat	1	28	(0)	227620
12	18.3	0.0	3.0	chr1	155255459	155255491	(93700931)	+	G-rich	Low_complexity	1	33	(0)	227628
14	27.2	1.6	3.2	chr1	155277400	155277462	(93678960)	+	(CCGC)n	Simple_repeat	1	61	(0)	227659
212	25.2	12.0	8.0	chr1	155563691	155563841	(93392581)	+	MIRb	SINE/MIR	89	250	(18)	228304
1326	12.0	0.0	21.1	chr1	155938807	155939157	(93017265)	C	AluJb	SINE/Alu	(1)	311	35	229147
19	9.2	2.9	0.0	chr1	156082822	156082856	(92873566)	+	(GGGGGCC)n	Simple_repeat	1	36	(0)	229435
20	19.1	1.7	3.4	chr1	156082887	156082944	(92873478)	+	(CGCTCCC)n	Simple_repeat	1	59	(0)	229436
304	26.3	0.0	0.0	chr1	156100444	156100519	(92855903)	+	MIRb	SINE/MIR	187	262	(6)	229477
1958	10.3	5.9	1.0	chr1	156193472	156193761	(92762661)	C	AluSx	SINE/Alu	(7)	305	1	229676
1554	7.7	1.0	0.5	chr1	156225283	156225517	(92730905)	C	L1PB1	LINE/L1	(0)	6151	5936	229742
180	27.4	5.2	1.4	chr1	156367613	156367686	(92588736)	+	L2c	LINE/L2	2835	2911	(508)	230029
358	29.7	7.8	8.5	chr1	156367720	156368094	(92588328)	+	L2c	LINE/L2	3003	3374	(13)	230029
181	33.3	1.3	3.7	chr1	156491667	156491747	(92464675)	C	MIR	SINE/MIR	(158)	104	26	230231
13	15.7	2.7	2.7	chr1	156500883	156500931	(92455491)	+	G-rich	Low_complexity	1	49	(0)	230238
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
689	24.2	6.1	2.6	chr1	156587207	156587397	(92369025)	C	MIR	SINE/MIR	(19)	243	46	230387
20	21.6	5.5	2.6	chr1	156591735	156591867	(92364555)	+	G-rich	Low_complexity	1	136	(0)	230402
1053	21.0	16.1	3.6	chr1	156622790	156623037	(92333385)	+	AluSx3	SINE/Alu	1	285	(26)	230471
48	0.0	0.0	2.1	chr1	156623038	156623085	(92333337)	+	(AAAT)n	Simple_repeat	1	48	(0)	230472
198	38.6	4.6	6.6	chr1	156623086	156623184	(92333238)	C	L2	LINE/L2	(595)	2824	2728	230470
696	30.8	8.9	0.0	chr1	156688988	156689234	(92267188)	+	L3b	LINE/CR1	3741	4011	(88)	230581
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
13830	10.2	2.7	2.9	chr1	156919754	156919926	(92036496)	+	Tigger1	DNA/TcMar-Tigger	2250	2414	(4)	230981
228	27.2	1.2	4.7	chr1	156999063	156999147	(91957275)	+	MIR3	SINE/MIR	13	94	(114)	231103
734	24.6	7.3	2.0	chr1	156999184	156999378	(91957044)	C	MIRb	SINE/MIR	(59)	209	4	231104
1127	18.4	0.5	2.7	chr1	157090418	157090640	(91865782)	+	MER20	DNA/hAT-Charlie	2	219	(0)	231255
2644	11.0	3.8	6.5	chr1	157273298	157273792	(91682630)	C	LTR21A	LTR/ERV1	(0)	481	1	231519
2655	15.0	3.1	3.9	chr1	157273793	157274117	(91682305)	C	HERVFH21-int	LTR/ERV1	(0)	6529	6204	231519
654	30.2	2.8	0.0	chr1	159916219	159916430	(89039992)	+	Chap1_Mam	DNA/hAT-Charlie	1	218	(124)	234955
336	27.4	6.1	7.3	chr1	160022988	160023152	(88933270)	+	L2c	LINE/L2	3225	3387	(0)	235119
346	28.2	6.5	1.2	chr1	160023236	160023403	(88933019)	+	MIRc	SINE/MIR	7	184	(84)	235120
276	32.9	1.1	1.7	chr1	160032504	160032639	(88923783)	+	L2c	LINE/L2	3001	3140	(247)	235134
249	33.6	6.3	6.7	chr1	160032763	160032985	(88923437)	+	L2c	LINE/L2	3158	3379	(8)	235134
443	29.9	10.2	7.4	chr1	160100788	160101043	(88855379)	C	L2b	LINE/L2	(0)	3375	3112	235230
2046	14.4	0.0	0.3	chr1	160293497	160293795	(88662627)	C	AluJb	SINE/Alu	(14)	298	1	235536
12	18.0	6.1	3.9	chr1	160400905	160400953	(88555469)	+	A-rich	Low_complexity	1	52	(0)	235701
17	17.3	9.6	3.3	chr1	161045483	161045565	(87910857)	+	(AGCCCCGC)n	Simple_repeat	1	91	(0)	236760
869	28.9	1.2	6.5	chr1	161046495	161046757	(87909665)	+	MIRb	SINE/MIR	5	253	(15)	236761
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
465	30.4	12.8	1.1	chr1	161133306	161133568	(87822854)	C	L2	LINE/L2	(462)	2957	2660	236932
1258	4.5	0.0	0.0	chr1	161153495	161153649	(87802773)	+	L1PA6	LINE/L1	6000	6154	(0)	236989
19	12.4	0.0	0.0	chr1	161399246	161399280	(87557142)	+	(GCCGGA)n	Simple_repeat	1	35	(0)	237469
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
681	0.0	0.0	0.0	chr1	161428077	161428150	(87528272)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	237526
823	22.2	6.1	3.9	chr1	161500017	161500274	(87456148)	+	L2a	LINE/L2	3162	3425	(1)	237634
12	20.2	2.9	0.0	chr1	161524527	161524560	(87431862)	+	(AGCTG)n	Simple_repeat	1	35	(0)	237664
660	0.0	0.0	0.0	chr1	161531113	161531184	(87425238)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	237673
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
5112	12.1	6.7	3.6	chr1	161763132	161763739	(87192683)	C	MER49	LTR/ERV1	(300)	623	1	238067
542	23.7	15.1	0.8	chr1	161763791	161764034	(87192388)	+	L1M5	LINE/L1	5301	5577	(714)	238061
461	28.6	11.0	3.3	chr1	161884592	161884801	(87071621)	C	L2a	LINE/L2	(2)	3424	3197	238261
2961	12.5	2.1	0.0	chr1	161949486	161949902	(87006520)	C	MSTB1	LTR/ERVL-MaLR	(6)	426	1	238373
475	25.6	12.0	4.2	chr1	162207400	162207636	(86748786)	+	MIRb	SINE/MIR	4	261	(7)	238747
2727	16.4	1.6	6.8	chr1	162976188	162976729	(85979693)	C	MLT2B3	LTR/ERVL	(0)	554	42	240052
1389	22.1	10.4	4.8	chr1	162976730	162977251	(85979171)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	240053
4939	25.2	7.9	0.8	chr1	164452158	164453590	(84502832)	+	L1MB7	LINE/L1	69	1611	(5256)	242125
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
12	13.9	0.0	0.0	chr1	167220935	167220958	(81735464)	+	(CAG)n	Simple_repeat	1	24	(0)	246372
2156	13.2	0.0	1.6	chr1	167658414	167658730	(81297692)	C	AluSz	SINE/Alu	(0)	312	1	247084
943	29.2	9.0	6.6	chr1	167658731	167659280	(81297142)	C	L1ME3G	LINE/L1	(345)	579	15	247083
219	29.6	4.7	2.4	chr1	168392016	168392098	(80564324)	+	L2b	LINE/L2	3291	3375	(0)	248321
2878	27.3	11.9	5.1	chr1	168406051	168408359	(80548063)	+	L1MEg	LINE/L1	159	2636	(3510)	248352
442	23.4	43.1	2.2	chr1	168408370	168408604	(80547818)	C	L2a	LINE/L2	(45)	3381	3048	248353
273	34.1	12.5	0.8	chr1	168801486	168801612	(80154810)	+	MIR3	SINE/MIR	54	197	(11)	248964
357	36.0	8.8	3.6	chr1	170562612	170563032	(78393390)	C	MamGypLTR2b	LTR/Gypsy	(474)	448	4	251482
336	23.7	10.4	7.0	chr1	170563095	170563280	(78393142)	C	MamGypLTR1b	LTR/Gypsy	(589)	193	1	251483
800	23.1	1.6	1.1	chr1	171142575	171142762	(77813660)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	252252
16	9.8	0.0	0.0	chr1	171142847	171142868	(77813554)	+	(T)n	Simple_repeat	1	22	(0)	252253
43	0.0	0.0	0.0	chr1	172359126	172359162	(76597260)	+	(AC)n	Simple_repeat	1	37	(0)	254131
2163	13.9	0.3	0.0	chr1	173526842	173527144	(75429278)	C	AluSx	SINE/Alu	(8)	304	1	255720
472	31.9	13.4	0.4	chr1	174753028	174753254	(74203168)	+	MIR	SINE/MIR	2	262	(0)	257622
455	23.9	15.2	2.7	chr1	174998534	174998829	(73957593)	C	L1ME3A	LINE/L1	(21)	6152	5818	258067
593	30.8	1.1	1.1	chr1	175218060	175218246	(73738176)	+	LTR85b	LTR/Gypsy?	598	784	(0)	258394
3892	14.1	4.7	1.0	chr1	175471314	175471988	(73484434)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	531	258731
475	27.8	1.6	0.0	chr1	177228582	177228707	(71727715)	C	LTR16C	LTR/ERVL	(359)	130	3	261387
5327	18.0	10.9	1.5	chr1	177254410	177255465	(71700957)	+	Charlie1	DNA/hAT-Charlie	1586	2765	(16)	261426
238	26.9	1.3	1.3	chr1	177255481	177255559	(71700863)	C	MIR3	SINE/MIR	(49)	159	81	261428
41	14.1	0.0	1.4	chr1	178093761	178093834	(70862588)	+	(GCCGCC)n	Simple_repeat	1	74	(0)	262569
14	21.1	0.0	6.1	chr1	178094013	178094061	(70862361)	+	(GGC)n	Simple_repeat	1	49	(0)	262570
14	15.8	0.0	5.1	chr1	178094065	178094103	(70862319)	+	(CCCAG)n	Simple_repeat	1	39	(0)	262571
14	19.3	6.4	0.0	chr1	178094104	178094109	(70862313)	+	(CCCCAG)n	Simple_repeat	3	50	(0)	262572
13	19.5	0.0	2.7	chr1	178726029	178726065	(70230357)	+	G-rich	Low_complexity	1	37	(0)	263569
190	28.3	3.6	0.0	chr1	179870933	179870985	(69085437)	C	L2a	LINE/L2	(18)	3408	3354	265450
424	33.6	0.9	0.0	chr1	179931128	179931240	(69025182)	C	MIR	SINE/MIR	(108)	154	41	265557
818	23.6	1.9	1.5	chr1	180494426	180494631	(68461791)	+	Charlie10a	DNA/hAT-Charlie	74	280	(0)	266454
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
399	31.0	15.4	5.1	chr1	181127263	181127459	(67828963)	C	MIRb	SINE/MIR	(22)	246	26	267516
452	24.5	0.0	11.5	chr1	181135329	181135485	(67820937)	C	MIR	SINE/MIR	(10)	252	114	267530
541	29.6	3.8	2.8	chr1	182175554	182175785	(66780637)	+	MIRb	SINE/MIR	1	260	(8)	268951
181	28.6	10.5	6.3	chr1	182393939	182394065	(66562357)	+	L2c	LINE/L2	3245	3377	(10)	269395
408	21.4	0.0	0.0	chr1	182394086	182394155	(66562267)	C	MamSINE1	SINE/tRNA-RTE	(38)	252	183	269396
313	25.3	4.0	3.0	chr1	182604884	182604993	(66351429)	C	MIR	SINE/MIR	(98)	164	61	269730
383	30.7	9.7	5.8	chr1	182616033	182616340	(66340082)	C	MLT1N2	LTR/ERVL-MaLR	(31)	531	211	269756
225	32.4	6.0	7.2	chr1	182662744	182662896	(66293526)	+	L2b	LINE/L2	3225	3375	(0)	269839
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
1418	21.2	2.6	2.6	chr1	183029955	183030293	(65926129)	+	MER58B	DNA/hAT-Charlie	3	341	(0)	270463
520	30.4	5.0	12.5	chr1	183060449	183060752	(65895670)	+	L2c	LINE/L2	3108	3387	(0)	270508
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
1779	24.8	11.0	0.5	chr1	184930961	184930987	(64025435)	+	Kanga1c	DNA/TcMar-Tc2	2	33	(696)	273446
2497	9.6	0.0	0.0	chr1	184930988	184931299	(64025123)	C	AluSx1	SINE/Alu	(0)	312	1	273447
192	35.5	0.0	3.8	chr1	184982286	184982364	(63974058)	C	AmnSINE1	SINE/5S-Deu-L2	(396)	179	104	273539
360	29.6	21.9	2.2	chr1	185439274	185439688	(63516734)	C	L2	LINE/L2	(2708)	711	192	274259
220	21.9	16.9	0.0	chr1	185439829	185439892	(63516530)	+	MIR	SINE/MIR	68	144	(118)	274260
430	32.4	9.1	1.1	chr1	197773112	197773292	(51183130)	+	MIRc	SINE/MIR	71	267	(1)	290337
30	0.0	0.0	0.0	chr1	197917091	197917116	(51039306)	+	(TG)n	Simple_repeat	1	26	(0)	290528
348	28.3	8.5	10.7	chr1	198553051	198553256	(50403166)	+	L2c	LINE/L2	3184	3384	(3)	291364
2240	16.8	4.3	0.2	chr1	199529317	199529519	(49426903)	+	MSTB1	LTR/ERVL-MaLR	3	220	(212)	292626
59	1.8	0.0	0.0	chr1	199529520	199529574	(49426848)	+	(CT)n	Simple_repeat	1	55	(0)	292627
2240	16.8	4.3	0.2	chr1	199529575	199529770	(49426652)	+	MSTB1	LTR/ERVL-MaLR	221	418	(14)	292626
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
271	31.2	5.5	5.0	chr1	200733670	200733851	(48222571)	C	MIR3	SINE/MIR	(10)	198	16	294897
216	13.7	0.0	7.3	chr1	201025991	201026045	(47930377)	+	L3b	LINE/CR1	4967	5017	(215)	295386
204	25.8	15.1	3.1	chr1	201171603	201171730	(47784692)	+	MIRc	SINE/MIR	58	203	(65)	295612
413	27.1	1.6	3.2	chr1	202287187	202287312	(46669110)	C	L2a	LINE/L2	(0)	3426	3303	297623
2831	25.4	11.8	1.1	chr1	202287365	202288466	(46667956)	+	L2a	LINE/L2	2195	3422	(4)	297624
254	30.8	0.0	0.0	chr1	202959196	202959260	(45997162)	+	MIRb	SINE/MIR	164	228	(40)	298821
404	13.2	2.6	8.4	chr1	202959286	202959368	(45997054)	C	AluJo	SINE/Alu	(12)	300	223	298822
239	22.8	8.1	4.8	chr1	202959372	202959454	(45996968)	C	MER105	DNA	(93)	110	25	298819
657	29.7	5.7	0.0	chr1	202959459	202959690	(45996732)	+	MIR	SINE/MIR	15	260	(2)	298823
297	28.4	3.8	1.0	chr1	202969247	202969349	(45987073)	C	MER94B	DNA/hAT-Blackjack	(4)	129	24	298832
285	29.2	2.1	1.4	chr1	203118081	203118190	(45838232)	+	MIR	SINE/MIR	108	215	(53)	299080
991	29.4	8.3	11.2	chr1	203264187	203264524	(45691898)	C	L1M4	LINE/L1	(5490)	1250	958	299291
2349	8.9	0.0	0.0	chr1	203264525	203264815	(45691607)	C	AluSg	SINE/Alu	(17)	293	3	299309
46	12.3	0.0	0.0	chr1	203306796	203306875	(45649547)	+	(AC)n	Simple_repeat	1	80	(0)	299386
546	30.5	7.5	2.3	chr1	203316981	203317195	(45639227)	C	MER102a	DNA/hAT-Charlie	(27)	303	77	299401
13	14.7	0.0	3.1	chr1	203327650	203327681	(45628741)	+	G-rich	Low_complexity	1	32	(0)	299420
16	23.6	1.7	3.4	chr1	204073047	204073104	(44883318)	+	(CCCT)n	Simple_repeat	1	59	(0)	300927
11	16.4	5.9	0.0	chr1	204073214	204073247	(44883175)	+	(GAGCTCA)n	Simple_repeat	1	36	(0)	300928
23	16.8	0.0	8.3	chr1	204494845	204494916	(44461506)	+	(CCTCC)n	Simple_repeat	1	72	(0)	301631
2460	9.1	0.0	0.0	chr1	204506171	204506479	(44449943)	+	AluSc	SINE/Alu	1	309	(0)	301656
656	1.4	0.0	0.0	chr1	204506527	204506599	(44449823)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	301657
352	25.5	0.0	5.4	chr1	205175751	205175862	(43780560)	+	L2a	LINE/L2	3321	3426	(0)	302933
16	0.0	0.0	0.0	chr1	205499983	205500000	(43456422)	+	(GT)n	Simple_repeat	1	18	(0)	303563
12	14.4	6.2	0.0	chr1	205500170	205500201	(43456221)	+	(TGTGCA)n	Simple_repeat	1	34	(0)	303564
204	27.3	2.5	3.8	chr1	206118112	206118191	(42838231)	C	MIRc	SINE/MIR	(135)	133	55	304604
221	29.6	3.0	1.0	chr1	206912388	206912486	(42043936)	+	MIRc	SINE/MIR	166	266	(2)	305906
285	26.8	0.0	0.0	chr1	207051819	207051889	(41904533)	+	L2a	LINE/L2	3355	3425	(1)	306128
227	32.6	7.8	0.7	chr1	207051883	207052024	(41904398)	C	L2c	LINE/L2	(169)	3218	3066	306129
7266	12.7	3.7	1.6	chr1	208351732	208352005	(40604417)	+	Tigger3b	DNA/TcMar-Tigger	947	1231	(0)	308002
570	23.2	9.0	0.7	chr1	208352006	208352121	(40604301)	C	MIRb	SINE/MIR	(60)	208	81	308001
342	33.6	12.7	1.4	chr1	208881233	208881455	(40074967)	+	MIR	SINE/MIR	9	260	(2)	308826
17	20.3	2.4	0.0	chr1	209675275	209675315	(39281107)	+	(TCC)n	Simple_repeat	1	42	(0)	310028
532	21.7	5.1	0.0	chr1	210151393	210151528	(38804894)	C	FLAM_C	SINE/Alu	(90)	212	11	310708
187	33.3	13.1	0.0	chr1	210232273	210232365	(38724057)	+	MamRTE1	LINE/RTE-BovB	3658	3764	(48)	310823
17	20.6	4.0	5.2	chr1	210232522	210232595	(38723827)	+	G-rich	Low_complexity	1	77	(0)	310824
426	29.4	14.1	1.9	chr1	210330314	210330518	(38625904)	C	MIRb	SINE/MIR	(30)	238	5	310988
1892	13.8	11.0	1.7	chr1	210346916	210347277	(38609145)	C	L1MA7	LINE/L1	(14)	6277	5878	311016
249	19.8	9.0	13.3	chr1	210347281	210347385	(38609037)	+	MIRc	SINE/MIR	113	212	(56)	311017
797	26.6	8.3	4.8	chr1	210373543	210373878	(38582544)	C	LTR82A	LTR/ERVL	(58)	814	466	311067
382	22.0	2.6	0.0	chr1	210374670	210374765	(38581657)	C	L1MD3	LINE/L1	(14)	7981	7897	311069
330	16.4	23.2	4.9	chr1	210400055	210400176	(38556246)	C	L1MEg	LINE/L1	(4670)	1414	1264	311111
346	26.7	8.7	0.8	chr1	210654377	210654493	(38301929)	+	L2b	LINE/L2	3245	3371	(4)	311476
868	11.2	1.5	3.0	chr1	211676076	211676209	(37280213)	+	AluSz6	SINE/Alu	5	136	(176)	313175
248	30.9	2.2	9.8	chr1	211735752	211735945	(37220477)	C	MIRc	SINE/MIR	(7)	261	83	313285
16	17.1	4.9	2.3	chr1	212558963	212559003	(36397419)	+	(CG)n	Simple_repeat	1	43	(0)	314754
737	20.3	8.4	0.0	chr1	212687164	212687316	(36269106)	C	L1ME1	LINE/L1	(15)	6164	5998	314965
373	19.2	10.7	0.2	chr1	212687343	212687431	(36268991)	+	L2a	LINE/L2	3287	3419	(7)	314966
185	34.3	4.3	0.0	chr1	212687493	212687559	(36268863)	C	L3	LINE/CR1	(7)	4092	4023	314967
574	29.9	4.0	0.5	chr1	212974817	212975008	(35981414)	+	MIRc	SINE/MIR	43	241	(27)	315528
402	31.0	7.6	4.5	chr1	212975002	212975180	(35981242)	C	MIRc	SINE/MIR	(45)	223	39	315529
381	18.8	7.0	0.0	chr1	214289471	214289550	(34666872)	C	L1ME5	LINE/L1	(7)	6187	6102	317501
622	35.1	1.3	2.4	chr1	214439734	214440110	(34516312)	C	CR1_Mam	LINE/CR1	(612)	1592	1220	317695
18	17.9	2.3	0.0	chr1	214603356	214603399	(34353023)	+	(GGCGGCG)n	Simple_repeat	1	45	(0)	317968
267	28.0	12.0	4.5	chr1	218711941	218712143	(30244279)	C	L2b	LINE/L2	(61)	3326	3101	323674
19	0.0	0.0	0.0	chr1	219991228	219991248	(28965174)	+	(A)n	Simple_repeat	1	21	(0)	325439
737	15.9	2.4	3.2	chr1	220094856	220094981	(28861441)	+	FLAM_C	SINE/Alu	1	125	(18)	325676
811	30.3	6.8	2.6	chr1	221284015	221284326	(27672096)	C	L4_A_Mam	LINE/RTE-X	(194)	4796	4471	327435
379	31.2	5.3	0.8	chr1	221284334	221284485	(27671937)	+	MIRb	SINE/MIR	2	167	(101)	327436
975	23.1	0.5	0.0	chr1	221525976	221526183	(27430239)	+	MER3	DNA/hAT-Charlie	1	209	(0)	327776
6809	20.7	6.2	3.4	chr1	222256717	222257981	(26698441)	C	Charlie10	DNA/hAT-Charlie	(812)	2010	698	328859
422	21.6	16.9	0.0	chr1	222805817	222805964	(26150458)	C	LTR50	LTR/ERVL	(523)	272	95	329711
245	27.3	0.0	8.3	chr1	222806013	222806084	(26150338)	+	LTR88a	LTR/Gypsy?	3	68	(769)	329712
300	31.9	6.7	11.7	chr1	222806147	222806217	(26150205)	+	L2c	LINE/L2	2923	2996	(430)	329713
13	7.0	10.0	0.0	chr1	222951247	222951276	(26005146)	+	(TTTCA)n	Simple_repeat	1	33	(0)	329948
12	27.4	0.0	5.2	chr1	222951262	222951319	(26005103)	+	(TTTCTT)n	Simple_repeat	1	58	(0)	329949
634	27.5	6.8	5.9	chr1	222975762	222976051	(25980371)	+	Chap1_Mam	DNA/hAT-Charlie	46	338	(4)	329993
18	0.0	0.0	0.0	chr1	223363361	223363382	(25593040)	+	(TGC)n	Simple_repeat	1	22	(0)	330583
328	33.2	5.6	4.5	chr1	223641530	223641775	(25314647)	+	L2	LINE/L2	2833	3081	(338)	330951
341	27.4	4.0	1.0	chr1	223706619	223706714	(25249708)	+	MIRb	SINE/MIR	116	214	(54)	331073
2422	9.6	0.0	0.0	chr1	223706798	223707098	(25249324)	+	AluSx1	SINE/Alu	1	301	(11)	331074
46	6.5	3.1	0.0	chr1	223707237	223707300	(25249122)	+	(TC)n	Simple_repeat	1	66	(0)	331075
1609	16.9	0.3	4.5	chr1	223738158	223738470	(25217952)	C	AluJo	SINE/Alu	(12)	300	1	331139
379	29.6	7.9	6.8	chr1	223738471	223738563	(25217859)	C	L1M5	LINE/L1	(1534)	4612	4520	331138
229	34.6	3.0	4.7	chr1	223738574	223738743	(25217679)	C	L4_B_Mam	LINE/RTE-X	(1897)	3044	2878	331140
706	23.9	5.8	0.6	chr1	223749496	223749676	(25206746)	+	MIR	SINE/MIR	45	235	(27)	331159
860	34.3	8.5	3.4	chr1	223819805	223820408	(25136014)	C	L2a	LINE/L2	(0)	3426	2786	331274
2214	6.0	1.6	10.2	chr1	223841903	223842236	(25114186)	C	AluSg	SINE/Alu	(5)	305	1	331308
13	7.5	7.1	0.0	chr1	224183155	224183182	(24773240)	+	(GGCG)n	Simple_repeat	1	30	(0)	331974
360	34.2	12.9	1.5	chr1	224317312	224317572	(24638850)	C	L2c	LINE/L2	(116)	3271	2977	332318
195	34.9	0.0	1.5	chr1	224317608	224317674	(24638748)	C	L2c	LINE/L2	(556)	2863	2798	332318
741	27.2	10.2	6.2	chr1	224884251	224884559	(24071863)	C	LTR40A1	LTR/ERVL	(107)	477	155	333316
430	20.1	10.7	11.7	chr1	224884631	224884810	(24071612)	C	LTR40A1	LTR/ERVL	(386)	198	21	333316
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
21621	13.4	4.1	1.3	chr1	225108473	225115060	(23841362)	C	L1M1	LINE/L1	(767)	6798	10	333579
244	21.4	21.2	0.0	chr1	225434122	225434210	(23522212)	C	MIRb	SINE/MIR	(129)	139	27	333966
15	15.4	2.6	2.6	chr1	225434409	225434446	(23521976)	+	(TTGA)n	Simple_repeat	1	39	(0)	333967
3239	16.1	5.7	0.2	chr1	225462619	225463184	(23493238)	+	LTR26	LTR/ERV1	5	603	(0)	334009
255	30.2	10.5	0.0	chr1	225474923	225475041	(23481381)	+	MIR	SINE/MIR	27	159	(103)	334028
367	28.0	12.9	3.9	chr1	225602481	225602837	(23353585)	+	L1ME3A	LINE/L1	3865	4258	(1888)	334213
498	29.7	10.6	2.1	chr1	225602844	225603084	(23353338)	+	L1ME3A	LINE/L1	4556	4819	(1327)	334213
319	20.6	0.0	0.0	chr1	225607368	225607435	(23348987)	+	HAL1	LINE/L1	145	212	(2295)	334221
16	0.0	0.0	0.0	chr1	225607516	225607533	(23348889)	+	(A)n	Simple_repeat	1	18	(0)	334222
1631	24.4	14.3	7.6	chr1	225607680	225608533	(23347889)	+	HAL1	LINE/L1	539	1479	(1028)	334221
12	23.0	6.9	1.6	chr1	226062414	226062471	(22893951)	+	G-rich	Low_complexity	1	62	(0)	335129
2301	5.7	0.0	4.7	chr1	226199241	226199539	(22756883)	+	AluY	SINE/Alu	1	285	(26)	335424
46	0.0	0.0	0.0	chr1	226199555	226199596	(22756826)	+	(ATAA)n	Simple_repeat	1	42	(0)	335425
495	24.1	1.7	0.0	chr1	226199630	226199745	(22756677)	C	L1M5	LINE/L1	(409)	5770	5653	335426
1302	23.0	6.7	4.4	chr1	226405965	226406349	(22550073)	C	Charlie4a	DNA/hAT-Charlie	(102)	406	1	335832
203	34.6	2.4	0.0	chr1	226406388	226406468	(22549954)	+	L2	LINE/L2	2867	2949	(470)	335834
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
23616	8.3	0.7	1.5	chr1	227406289	227407582	(21548840)	+	L1PB1	LINE/L1	5357	6617	(0)	337461
202	27.1	3.4	8.6	chr1	227787749	227787841	(21168581)	+	AmnSINE1	SINE/5S-Deu-L2	165	252	(323)	337889
40	0.0	0.0	0.0	chr1	228406869	228406905	(20549517)	+	(T)n	Simple_repeat	1	37	(0)	338659
19	31.2	4.0	1.0	chr1	228407064	228407163	(20549259)	+	G-rich	Low_complexity	1	104	(0)	338660
34	0.0	0.0	0.0	chr1	228458656	228458684	(20497738)	+	(GT)n	Simple_repeat	1	29	(0)	338742
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
15	21.3	9.3	0.0	chr1	228735308	228735361	(20221061)	+	(CG)n	Simple_repeat	1	59	(0)	339120
2943	16.7	7.3	2.8	chr1	229011029	229011602	(19944820)	+	Tigger3c	DNA/TcMar-Tigger	1	602	(0)	339554
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
420	33.0	5.6	5.1	chr1	229894651	229894864	(19061558)	+	MIRc	SINE/MIR	19	233	(35)	341091
439	32.7	13.4	4.6	chr1	229895222	229895593	(19060829)	+	L2a	LINE/L2	2620	3029	(390)	341092
635	26.9	5.9	15.7	chr1	229895887	229896282	(19060140)	+	L2a	LINE/L2	3072	3426	(0)	341092
3776	23.4	6.8	1.8	chr1	229948803	229949912	(19006510)	+	L1M5	LINE/L1	3875	5043	(1103)	341175
891	15.2	10.8	5.0	chr1	229949913	229950154	(19006268)	C	MER33	DNA/hAT-Charlie	(0)	324	67	341176
431	33.2	15.4	0.0	chr1	231377125	231377338	(17579084)	C	MIR	SINE/MIR	(8)	254	2	343385
516	27.5	16.8	2.0	chr1	231377339	231377583	(17578839)	C	L2a	LINE/L2	(651)	2768	2479	343383
1940	12.2	1.7	1.7	chr1	231414734	231415021	(17541401)	C	AluJb	SINE/Alu	(12)	300	13	343459
1837	15.1	1.3	3.0	chr1	231415022	231415288	(17541134)	+	AluJr	SINE/Alu	38	300	(12)	343458
294	34.8	10.0	5.1	chr1	231418420	231418581	(17537841)	+	MIRb	SINE/MIR	10	190	(78)	343467
219	28.1	1.2	6.8	chr1	232678555	232678642	(16277780)	+	MIR	SINE/MIR	88	170	(92)	345246
181	36.4	5.7	1.5	chr1	233241942	233242008	(15714414)	C	Tigger19b	DNA/TcMar-Tigger	(329)	221	152	346088
1960	17.5	2.0	0.9	chr1	233656239	233656583	(15299839)	C	MER65C	LTR/ERV1	(112)	349	1	346721
1843	16.4	1.3	1.3	chr1	233656607	233656917	(15299505)	C	AluJr	SINE/Alu	(1)	311	1	346722
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
37	15.3	0.0	1.4	chr1	234600189	234600258	(14356164)	+	(GCCCC)n	Simple_repeat	1	70	(0)	348158
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
15	27.6	0.0	0.0	chr1	234611146	234611184	(14345238)	+	GA-rich	Low_complexity	1	39	(0)	348169
21	10.4	0.0	0.0	chr1	234971680	234971710	(13984712)	+	(TG)n	Simple_repeat	1	31	(0)	348758
512	11.0	1.4	0.0	chr1	234971784	234971856	(13984566)	C	MADE1	DNA/TcMar-Mariner	(0)	80	7	348759
1949	12.4	1.7	3.1	chr1	234977663	234977953	(13978469)	+	AluSx	SINE/Alu	1	287	(25)	348768
2016	13.0	2.0	9.2	chr1	234977954	234978029	(13978393)	C	MLT1B	LTR/ERVL-MaLR	(303)	87	38	348767
15	23.5	2.1	2.0	chr1	234978170	234978217	(13978205)	+	(TGAA)n	Simple_repeat	1	49	(0)	348769
2348	11.0	0.0	0.0	chr1	235132306	235132606	(13823816)	C	AluSc	SINE/Alu	(8)	301	1	349094
272	23.9	17.4	2.1	chr1	235156737	235156877	(13799545)	C	L2c	LINE/L2	(0)	3387	3221	349148
189	28.7	7.2	11.0	chr1	235903202	235903346	(13053076)	C	MIRb	SINE/MIR	(119)	149	11	350592
474	26.6	5.3	4.0	chr1	236058994	236059196	(12897226)	C	MIRb	SINE/MIR	(24)	206	6	350896
559	29.8	11.2	0.0	chr1	236067694	236067908	(12888514)	C	MIRb	SINE/MIR	(25)	243	2	350919
16	14.3	0.0	6.8	chr1	236281579	236281622	(12674800)	+	(GGCCC)n	Simple_repeat	1	44	(0)	351303
315	25.3	5.4	3.1	chr1	236328033	236328195	(12628227)	C	L1MEc	LINE/L1	(5303)	1112	946	351397
310	21.5	1.5	0.0	chr1	236328209	236328273	(12628149)	+	MER58D	DNA/hAT-Charlie	321	386	(0)	351398
2418	8.2	0.7	0.0	chr1	236466788	236467092	(12489330)	+	AluY	SINE/Alu	2	308	(3)	351690
183	27.9	0.0	4.7	chr1	236467160	236467223	(12489199)	C	MIR3	SINE/MIR	(32)	176	116	351691
619	20.2	3.5	13.8	chr1	236472324	236472518	(12483904)	+	MER5B	DNA/hAT-Charlie	5	178	(0)	351707
12	17.7	3.1	0.0	chr1	237166978	237167009	(11789413)	+	(ACAA)n	Simple_repeat	1	33	(0)	352865
402	31.2	4.8	3.0	chr1	240110196	240110360	(8846062)	+	MIRc	SINE/MIR	17	184	(84)	357164
1085	14.9	1.2	0.0	chr1	240653199	240653366	(8303056)	C	MER58B	DNA/hAT-Charlie	(0)	341	172	358021
314	30.1	7.1	3.1	chr1	241459513	241459706	(7496716)	C	L2a	LINE/L2	(0)	3387	3203	359310
2036	16.5	0.3	0.0	chr1	241695833	241696141	(7260281)	+	AluJb	SINE/Alu	1	310	(2)	359669
4382	12.6	0.0	0.3	chr1	241696323	241696958	(7259464)	C	MER41B	LTR/ERV1	(0)	634	1	359670
758	19.8	3.7	0.0	chr1	241847630	241847786	(7108636)	C	MER67A	LTR/ERV1	(0)	543	381	359940
2281	12.9	0.3	0.3	chr1	241988566	241988875	(6967547)	C	AluSx	SINE/Alu	(2)	310	1	360277
1103	22.8	1.4	0.0	chr1	241988946	241989164	(6967258)	C	MER58A	DNA/hAT-Charlie	(0)	224	3	360278
15	23.9	4.1	0.0	chr1	244048208	244048256	(4908166)	+	(CGC)n	Simple_repeat	1	51	(0)	363518
15	13.1	2.0	8.0	chr1	244048243	244048291	(4908131)	+	(CCGCC)n	Simple_repeat	1	50	(0)	363519
1258	27.2	12.4	2.2	chr1	244665908	244666449	(4289973)	+	L2c	LINE/L2	1187	1791	(1628)	364527
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
254	21.7	0.0	0.0	chr1	245017597	245017656	(3938766)	+	L2a	LINE/L2	3327	3425	(1)	365300
1160	20.8	1.3	0.0	chr1	245060833	245061053	(3895369)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	365401
9560	13.9	5.8	4.0	chr10	916996	918037	(132879385)	+	LTR49-int	LTR/ERV1	4603	5667	(664)	372001
12	19.9	9.6	0.0	chr10	1048949	1049000	(132748422)	+	(CCAGCG)n	Simple_repeat	1	57	(0)	372219
1995	13.1	1.4	0.0	chr10	1049662	1049952	(132747470)	C	AluSp	SINE/Alu	(18)	295	1	372221
196	30.9	13.4	2.3	chr10	3853805	3853821	(129943601)	+	MamRTE1	LINE/RTE-BovB	88	184	(3628)	375644
213	33.8	0.0	1.4	chr10	3853822	3853890	(129943532)	+	MamSINE1	SINE/tRNA-RTE	90	157	(133)	375645
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
2367	20.1	10.8	8.2	chr10	6141875	6142367	(127655055)	C	MER21C	LTR/ERVL	(18)	920	430	378969
554	18.4	16.0	6.7	chr10	6923260	6923408	(126874014)	+	MER3	DNA/hAT-Charlie	1	170	(39)	380274
2586	8.9	0.7	0.0	chr10	6923409	6923710	(126873712)	+	AluSc	SINE/Alu	1	304	(5)	380275
412	28.7	3.5	2.5	chr10	7432921	7433120	(126364302)	+	MER127	DNA/TcMar-Tigger	109	310	(54)	380999
32	12.5	3.3	0.0	chr10	8054764	8054824	(125742598)	+	GA-rich	Low_complexity	1	63	(0)	382058
376	30.2	0.8	4.8	chr10	8534079	8534203	(125263219)	C	MER131	DNA?	(95)	120	1	382937
2442	8.8	0.0	0.0	chr10	8703142	8703438	(125093984)	+	AluSg	SINE/Alu	1	297	(13)	383204
456	25.7	10.4	1.5	chr10	11547254	11547458	(122249964)	C	MIR	SINE/MIR	(46)	222	2	387041
282	28.3	3.6	4.5	chr10	11547467	11547542	(122249880)	+	MIRc	SINE/MIR	150	228	(40)	387040
307	30.9	3.5	4.6	chr10	12405612	12405784	(121391638)	+	MamRep434	DNA/TcMar-Tigger	1	171	(255)	388874
475	26.8	8.2	0.6	chr10	12448881	12449049	(121348373)	+	MIR	SINE/MIR	80	262	(0)	388950
434	30.1	0.0	0.8	chr10	12455736	12455859	(121341563)	C	LTR82A	LTR/ERVL	(746)	126	4	388970
229	34.9	0.0	2.4	chr10	12455863	12455947	(121341475)	C	L3	LINE/CR1	(1188)	2911	2829	388967
1397	27.7	12.6	3.3	chr10	12720095	12720888	(121076534)	C	MamGypsy2-I	LTR/Gypsy	(206)	3960	3082	389453
2293	8.0	3.3	2.3	chr10	14839292	14839591	(118957831)	+	AluSx1	SINE/Alu	1	303	(9)	393158
500	29.2	4.4	1.5	chr10	14953060	14953257	(118844165)	+	LTR82A	LTR/ERVL	154	357	(515)	393353
656	27.3	10.6	7.3	chr10	14953282	14953680	(118843742)	+	LTR82A	LTR/ERVL	441	854	(18)	393353
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
1723	20.9	1.3	1.0	chr10	15182154	15182464	(118614958)	+	AluJb	SINE/Alu	1	312	(0)	393784
3449	8.9	2.6	2.0	chr10	15409296	15409798	(118387624)	+	L1PB	LINE/L1	4788	5293	(853)	394211
46	0.0	0.0	0.0	chr10	15635919	15635957	(118161465)	+	(AC)n	Simple_repeat	1	39	(0)	394595
1042	30.3	1.1	0.8	chr10	15704590	15704942	(118092480)	C	MamGypsy2-I	LTR/Gypsy	(3812)	354	1	394685
224	26.3	24.3	0.0	chr10	15792191	15792346	(118005076)	+	L2b	LINE/L2	3158	3363	(12)	394816
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
13	14.1	0.0	5.7	chr10	21526051	21526085	(112271337)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	403870
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
18	13.2	0.0	0.0	chr10	21526217	21526249	(112271173)	+	(GGGAG)n	Simple_repeat	1	33	(0)	403872
20	26.9	3.2	3.1	chr10	21534817	21534910	(112262512)	+	(CCGCCG)n	Simple_repeat	1	97	(0)	403880
3960	15.3	7.3	4.0	chr10	21660894	21661638	(112135784)	C	L1MCa	LINE/L1	(3088)	3233	2449	404142
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
14	11.7	2.3	6.8	chr10	22340648	22340690	(111456732)	+	G-rich	Low_complexity	1	44	(0)	405128
218	26.8	18.6	1.3	chr10	22505936	22506086	(111291336)	+	L2b	LINE/L2	3187	3369	(6)	405380
568	29.0	15.4	3.4	chr10	22672982	22673391	(111124031)	+	L2c	LINE/L2	2920	3387	(0)	405597
180	27.9	4.7	0.0	chr10	22673401	22673461	(111123961)	C	MIR3	SINE/MIR	(122)	86	23	405598
48	23.9	4.2	4.7	chr10	23344117	23344368	(110453054)	+	G-rich	Low_complexity	1	250	(0)	406652
884	25.6	5.3	0.4	chr10	25547681	25547911	(108249511)	+	MIR	SINE/MIR	10	252	(10)	410348
15	22.0	0.0	5.7	chr10	25934809	25934861	(107862561)	+	G-rich	Low_complexity	1	53	(0)	410940
2817	11.0	2.2	5.2	chr10	26516562	26516863	(107280559)	C	MER4C	LTR/ERV1	(162)	303	2	411812
3084	13.9	1.5	4.3	chr10	26516864	26517179	(107280243)	C	MER34D	LTR/ERV1	(280)	299	1	411811
541	20.0	3.7	0.9	chr10	26524257	26524362	(107273060)	+	MER39	LTR/ERV1	361	469	(238)	411830
1746	19.2	1.7	2.8	chr10	26524407	26524759	(107272663)	C	MER4D	LTR/ERV1	(8)	895	547	411831
15	22.6	0.0	5.8	chr10	27998931	27998982	(105798440)	+	(CGC)n	Simple_repeat	1	52	(0)	414304
15	11.9	0.0	9.1	chr10	28327554	28327597	(105469825)	+	(ATTT)n	Simple_repeat	1	44	(0)	414849
1118	23.0	11.0	4.1	chr10	28559482	28559893	(105237529)	C	LTR56	LTR/ERV1	(1)	444	1	415357
824	27.1	5.4	0.5	chr10	29446274	29446484	(104350938)	C	MIR	SINE/MIR	(10)	252	31	416909
1914	13.8	12.4	0.6	chr10	32948497	32948845	(100848577)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	422513
4378	6.4	0.4	0.0	chr10	33132990	33133535	(100663887)	C	L1PA7	LINE/L1	(16)	6138	5591	422827
1565	20.3	2.9	5.1	chr10	33645275	33645481	(100151941)	C	MER2	DNA/TcMar-Tigger	(131)	214	1	423566
240	38.5	9.1	0.6	chr10	34581575	34581744	(99215678)	C	MIR3	SINE/MIR	(4)	204	19	424935
299	22.8	20.9	4.5	chr10	35332395	35332592	(98464830)	+	Charlie15b	DNA/hAT-Charlie	823	1061	(0)	426444
5892	15.5	5.5	2.6	chr10	36740099	36740384	(97057038)	C	Tigger3b	DNA/TcMar-Tigger	(935)	296	4	428495
238	30.8	9.9	0.7	chr10	43105918	43106064	(90691358)	+	MIRb	SINE/MIR	5	166	(102)	432960
13	19.8	1.6	8.1	chr10	43407227	43407287	(90390135)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	433435
1583	16.7	5.0	1.3	chr10	44245316	44245624	(89551798)	C	L1MB2	LINE/L1	(3)	6168	5848	434623
253	34.9	6.4	5.3	chr10	44326494	44326845	(89470577)	+	L2b	LINE/L2	2915	3288	(99)	434716
181	30.8	8.1	1.1	chr10	44950088	44950179	(88847243)	C	L3	LINE/CR1	(896)	3203	3105	435451
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
305	19.2	8.2	2.5	chr10	49741560	49741639	(84055783)	+	L3	LINE/CR1	3335	3419	(680)	442247
428	12.6	7.1	1.4	chr10	49741640	49742585	(84054837)	+	(AC)n	Simple_repeat	1	1013	(0)	442248
4931	15.2	3.5	2.5	chr10	50462989	50464194	(83333228)	+	L1MB2	LINE/L1	4951	6171	(0)	443393
1286	18.6	5.9	4.7	chr10	50464199	50464443	(83332979)	+	MLT1D	LTR/ERVL-MaLR	127	379	(126)	443394
823	23.9	2.5	0.5	chr10	50527370	50527567	(83269855)	C	MIR	SINE/MIR	(59)	203	2	443488
20	6.3	3.0	0.0	chr10	50622086	50622118	(83175304)	+	(TGCT)n	Simple_repeat	1	34	(0)	443658
198	10.7	17.6	5.1	chr10	50622133	50622191	(83175231)	C	AmnSINE1	SINE/5S-Deu-L2	(419)	156	89	443659
32	3.2	0.0	0.0	chr10	50990611	50990642	(82806780)	+	(AC)n	Simple_repeat	1	32	(0)	444192
18	8.5	0.0	0.0	chr10	50990757	50990781	(82806641)	+	(CA)n	Simple_repeat	1	25	(0)	444193
262	35.4	8.4	6.4	chr10	51224704	51224890	(82572532)	C	AmnSINE1	SINE/5S-Deu-L2	(60)	515	325	444530
477	32.0	8.7	0.5	chr10	59595965	59596150	(74201272)	C	MIR	SINE/MIR	(29)	233	30	455779
1865	16.7	1.7	2.4	chr10	59596151	59596443	(74200979)	C	AluJr	SINE/Alu	(21)	291	1	455780
2392	16.0	3.5	5.7	chr10	59608267	59608889	(74188533)	+	L1MD2	LINE/L1	5102	5717	(642)	455804
1255	23.9	8.4	3.2	chr10	59608884	59609037	(74188385)	+	L1MD2	LINE/L1	5967	6136	(223)	455804
30	0.0	0.0	0.0	chr10	59609038	59609063	(74188359)	+	(AC)n	Simple_repeat	1	26	(0)	455805
1255	23.9	8.4	3.2	chr10	59609064	59609161	(74188261)	+	L1MD2	LINE/L1	6137	6249	(110)	455804
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
199	27.0	13.7	1.6	chr10	60978637	60978700	(72818722)	C	AmnSINE2	SINE/tRNA-Deu	(45)	313	241	457911
17	11.2	0.0	0.0	chr10	60978730	60978758	(72818664)	+	(TTC)n	Simple_repeat	1	29	(0)	457912
4224	20.8	8.7	5.7	chr10	61846777	61848013	(71949409)	C	L1MC5	LINE/L1	(12)	9292	8016	459146
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
12	4.3	8.3	0.0	chr10	63627933	63627956	(70169466)	+	(CTTTC)n	Simple_repeat	1	26	(0)	462127
12	31.5	1.8	0.0	chr10	63630576	63630630	(70166792)	+	G-rich	Low_complexity	1	56	(0)	462129
581	18.1	0.9	4.1	chr10	63703765	63703885	(70093537)	C	LTR33A_	LTR/ERVL	(0)	531	415	462278
1999	14.1	0.9	1.8	chr10	65570387	65570726	(68226696)	+	MER61A	LTR/ERV1	1	337	(4)	464914
58	7.6	0.0	1.2	chr10	67849220	67849359	(65948063)	+	(GGAGG)n	Simple_repeat	1	138	(0)	468032
190	39.2	2.5	0.0	chr10	68154041	68154119	(65643303)	C	MIR1_Amn	SINE/MIR	(139)	91	11	468619
17	24.9	1.9	0.0	chr10	68560198	68560249	(65237173)	+	G-rich	Low_complexity	1	53	(0)	469546
1562	17.6	5.2	0.0	chr10	69093139	69093445	(64703977)	+	MER33	DNA/hAT-Charlie	1	324	(0)	470853
2170	10.3	3.5	0.0	chr10	69093596	69093895	(64703527)	+	AluSc8	SINE/Alu	1	311	(0)	470854
180	19.4	2.7	0.0	chr10	69217242	69217277	(64580145)	+	MIR3	SINE/MIR	133	169	(39)	471122
449	28.0	6.9	4.5	chr10	69392885	69392976	(64404446)	C	MER113	DNA/hAT-Charlie	(18)	503	406	471506
184	19.1	11.3	0.0	chr10	69800423	69800469	(63996953)	C	MIR3	SINE/MIR	(139)	69	17	472287
595	16.8	0.0	2.6	chr10	70403269	70403381	(63394041)	C	7SLRNA	srpRNA	(0)	320	211	473399
631	15.0	2.6	0.0	chr10	70403382	70403494	(63393928)	+	Charlie1b	DNA/hAT-Charlie	407	522	(1)	473400
238	16.9	6.1	9.4	chr10	70403645	70403729	(63393693)	+	L1ME4b	LINE/L1	706	787	(105)	473401
404	26.1	6.9	0.0	chr10	71860652	71860785	(61936637)	C	Charlie4z	DNA/hAT-Charlie	(19)	148	5	476035
5665	16.8	8.5	7.4	chr10	72149465	72149630	(61647792)	+	Charlie1a	DNA/hAT-Charlie	1264	1453	(2)	476619
542	33.9	5.1	1.9	chr10	72204485	72204806	(61592616)	C	L4_C_Mam	LINE/RTE-X	(2075)	3063	2731	476746
1843	14.4	3.3	1.7	chr10	72249333	72249630	(61547792)	C	AluJo	SINE/Alu	(9)	303	1	476860
64	0.0	0.0	0.0	chr10	72249639	72249695	(61547727)	+	(TATT)n	Simple_repeat	1	57	(0)	476861
2285	10.2	0.0	0.0	chr10	72249696	72249979	(61547443)	C	AluSq	SINE/Alu	(28)	285	2	476862
32	5.2	4.4	5.6	chr10	72278079	72278146	(61519276)	+	GA-rich	Low_complexity	1	71	(0)	476929
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
223	31.1	0.0	1.3	chr10	72355122	72355196	(61442226)	C	MIR3	SINE/MIR	(33)	175	102	477094
187	27.1	20.1	0.0	chr10	72387183	72387289	(61410133)	C	MIR3	SINE/MIR	(6)	202	69	477165
182	33.3	1.4	4.0	chr10	72387431	72387505	(61409917)	C	L2c	LINE/L2	(38)	3349	3277	477166
20	0.0	0.0	0.0	chr10	72688512	72688533	(61108889)	+	(A)n	Simple_repeat	1	22	(0)	477835
1934	12.9	1.0	0.7	chr10	72800190	72800494	(60996928)	+	Tigger4	DNA/TcMar-Tigger	2424	2729	(2)	478064
16	0.0	0.0	0.0	chr10	72802410	72802427	(60994995)	+	(A)n	Simple_repeat	1	18	(0)	478068
675	35.2	13.0	3.2	chr10	72812829	72813354	(60984068)	+	MamRTE1	LINE/RTE-BovB	3082	3666	(146)	478086
639	25.0	11.7	4.1	chr10	73503233	73503453	(60293969)	+	L2c	LINE/L2	3136	3375	(12)	479405
351	32.3	3.1	8.6	chr10	73886512	73886650	(59910772)	C	L2b	LINE/L2	(10)	3416	3238	480096
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
29	0.0	3.2	0.0	chr10	74949420	74949450	(58847972)	+	(AAAAC)n	Simple_repeat	1	32	(0)	482175
23	17.6	0.0	1.9	chr10	75111564	75111616	(58685806)	+	(CGCCCC)n	Simple_repeat	1	53	(0)	482444
2204	12.7	0.0	0.0	chr10	75375514	75375813	(58421609)	C	AluSz6	SINE/Alu	(9)	303	4	483004
509	26.3	6.5	8.8	chr10	75375814	75375867	(58421555)	+	MER103C	DNA/hAT-Charlie	245	292	(5)	483002
254	33.9	2.7	10.0	chr10	75375884	75376083	(58421339)	C	MIR3	SINE/MIR	(19)	189	5	483005
20	24.1	3.6	0.0	chr10	75402683	75402737	(58394685)	+	GA-rich	Low_complexity	1	57	(0)	483056
572	27.3	3.8	6.8	chr10	76086768	76087015	(57710407)	C	UCON89	DNA/hAT?	(0)	242	3	484035
390	23.6	1.1	0.0	chr10	77305886	77305974	(56491448)	C	UCON29	DNA/PiggyBac?	(34)	405	316	485675
1488	25.6	8.6	6.9	chr10	77943668	77943882	(55853540)	C	L1ME3B	LINE/L1	(42)	6200	6019	486864
2311	10.1	0.3	1.9	chr10	77943883	77944198	(55853224)	C	AluSz	SINE/Alu	(0)	312	2	486865
719	26.5	8.5	2.2	chr10	78755584	78755814	(55041608)	+	MIRc	SINE/MIR	5	251	(17)	488377
742	21.1	15.5	0.0	chr10	78755942	78756121	(55041301)	C	MER58A	DNA/hAT-Charlie	(8)	216	4	488378
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
369	31.9	6.7	2.4	chr10	79414693	79414862	(54382560)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	489573
236	32.2	19.3	0.4	chr10	80410564	80410771	(53386651)	C	MIRb	SINE/MIR	(4)	264	1	491178
2377	15.2	7.4	0.9	chr10	87585968	87586432	(46210990)	C	LTR44	LTR/ERV1	(3)	516	19	501500
203	24.5	0.0	2.0	chr10	87694041	87694090	(46103332)	C	L2a	LINE/L2	(2)	3424	3376	501678
264	28.7	18.0	5.7	chr10	87694094	87694252	(46103170)	C	MIRb	SINE/MIR	(66)	202	20	501679
277	23.3	16.9	1.3	chr10	87723360	87723499	(46073923)	C	MIRc	SINE/MIR	(51)	211	48	501727
6271	12.9	9.1	0.9	chr10	87845092	87846218	(45951204)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	2	501903
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
22	30.2	2.0	2.9	chr10	87863717	87863818	(45933604)	+	(CGG)n	Simple_repeat	1	104	(0)	501932
507	29.0	10.0	2.2	chr10	88317171	88317392	(45480030)	+	MIRc	SINE/MIR	19	259	(9)	502669
16	27.6	0.0	1.8	chr10	88880176	88880230	(44917192)	+	(CAGAGG)n	Simple_repeat	1	55	(0)	503504
610	27.8	5.3	7.0	chr10	91006380	91006607	(42790815)	C	LTR104_Mam	LTR/Gypsy	(770)	739	516	506653
426	25.4	6.0	16.0	chr10	91006693	91007030	(42790392)	C	LTR104_Mam	LTR/Gypsy	(1192)	317	16	506653
18	4.0	0.0	3.6	chr10	91672228	91672255	(42125167)	+	(CTG)n	Simple_repeat	1	28	(0)	507677
374	30.3	8.0	4.4	chr10	91708124	91708461	(42088961)	C	L1ME4a	LINE/L1	(6234)	869	519	507729
554	36.8	6.1	6.8	chr10	91708520	91708918	(42088504)	C	L1ME4a	LINE/L1	(6679)	424	29	507729
786	15.4	0.0	4.6	chr10	91710134	91710263	(42087159)	+	AluJr	SINE/Alu	1	124	(188)	507738
885	28.4	2.0	5.4	chr10	91899437	91899749	(41897673)	+	LTR16B1	LTR/ERVL	13	314	(166)	508047
1860	15.3	1.7	0.0	chr10	92567694	92567980	(41229442)	+	AluJr	SINE/Alu	3	294	(18)	509407
228	23.4	18.9	0.0	chr10	92568088	92568164	(41229258)	C	L2b	LINE/L2	(302)	3073	2979	509408
353	26.7	0.0	0.0	chr10	92568170	92568259	(41229163)	C	L2b	LINE/L2	(1010)	2409	2320	509408
311	27.8	9.5	0.0	chr10	92592773	92592905	(41204517)	C	MIR	SINE/MIR	(20)	242	96	509471
492	26.8	6.7	9.1	chr10	93216960	93217234	(40580188)	+	L1MC4	LINE/L1	7459	7726	(316)	510672
2083	14.1	3.9	5.1	chr10	93217255	93217463	(40579959)	C	MLT1B	LTR/ERVL-MaLR	(5)	385	179	510673
436	27.2	9.1	2.5	chr10	93542103	93542347	(40255075)	C	MER102a	DNA/hAT-Charlie	(24)	306	44	511314
217	21.1	0.0	1.7	chr10	93542643	93542700	(40254722)	C	MIR3	SINE/MIR	(1)	207	151	511315
1583	26.9	8.2	1.1	chr10	93806744	93807186	(39990236)	C	MLT1K	LTR/ERVL-MaLR	(109)	486	10	511831
934	20.1	12.6	3.8	chr10	94092901	94093138	(39704284)	+	CR1_Mam	LINE/CR1	714	975	(1229)	512364
2141	16.4	0.0	0.0	chr10	94673327	94673638	(39123784)	C	AluJb	SINE/Alu	(0)	312	1	513420
259	20.0	0.0	0.0	chr10	94673640	94673684	(39123738)	+	HERVL74-int	LTR/ERVL	4029	4073	(1612)	513419
2279	22.1	2.1	10.2	chr10	94673676	94674087	(39123335)	+	HERVL74-int	LTR/ERVL	4589	4942	(743)	513419
1350	23.5	5.0	7.0	chr10	96417447	96417963	(37379459)	+	MLT1H	LTR/ERVL-MaLR	36	541	(8)	515926
295	24.7	13.9	4.1	chr10	96587639	96587735	(37209687)	+	L2a	LINE/L2	3304	3411	(15)	516223
212	30.6	11.6	8.3	chr10	96587759	96588082	(37209340)	+	L2c	LINE/L2	2519	2854	(565)	516224
265	25.1	42.9	2.9	chr10	96618615	96618797	(37178625)	C	MIR	SINE/MIR	(3)	265	7	516285
11	17.2	7.7	0.0	chr10	96720027	96720065	(37077357)	+	(TCGCCTC)n	Simple_repeat	1	42	(0)	516502
574	29.0	10.9	0.0	chr10	97337091	97337311	(36460111)	+	MIRc	SINE/MIR	13	260	(8)	517748
192	27.3	2.9	5.7	chr10	97400004	97400073	(36397349)	C	L2a	LINE/L2	(0)	3426	3359	517894
2210	12.1	1.0	0.0	chr10	97401547	97401853	(36395569)	+	AluSz	SINE/Alu	1	310	(2)	517896
467	35.5	3.1	0.0	chr10	97446519	97446673	(36350749)	C	MIR3	SINE/MIR	(21)	187	28	518010
437	28.9	3.8	0.7	chr10	97497898	97498050	(36299372)	+	MIRc	SINE/MIR	3	160	(108)	518102
1676	15.2	1.0	4.0	chr10	97634007	97634308	(36163114)	+	AluJo	SINE/Alu	1	293	(19)	518387
653	23.5	10.9	4.5	chr10	98258637	98258859	(35538563)	+	MER113	DNA/hAT-Charlie	159	397	(124)	519605
369	24.6	13.6	0.9	chr10	98447044	98447158	(35350264)	C	MIR3	SINE/MIR	(62)	146	15	519934
2027	10.0	1.8	0.0	chr10	100365182	100365450	(33431972)	C	AluSq2	SINE/Alu	(39)	274	1	523213
792	34.7	8.8	4.3	chr10	100374124	100374725	(33422697)	C	L2	LINE/L2	(531)	2888	2256	523228
17	4.9	0.0	0.0	chr10	100535881	100535901	(33261521)	+	(T)n	Simple_repeat	1	21	(0)	523518
38	26.0	4.0	0.8	chr10	100654348	100654472	(33142950)	+	(TC)n	Simple_repeat	1	130	(0)	523735
14	5.0	0.0	0.0	chr10	100654762	100654782	(33142640)	+	(CGC)n	Simple_repeat	1	21	(0)	523736
12	4.7	0.0	7.7	chr10	101050378	101050403	(32747019)	+	(CGCC)n	Simple_repeat	1	26	(0)	524384
185	25.6	5.5	11.3	chr10	101060007	101060103	(32737319)	+	Penelope1_Vert	LINE/Penelope	567	657	(430)	524408
276	36.0	9.9	0.6	chr10	101060240	101060404	(32737018)	C	L2b	LINE/L2	(3)	3372	3191	524409
17	18.4	0.0	0.0	chr10	101467330	101467360	(32330062)	+	(T)n	Simple_repeat	1	31	(0)	525154
13	9.3	0.0	0.0	chr10	101818949	101818971	(31978451)	+	(TCAT)n	Simple_repeat	1	23	(0)	525733
312	26.6	6.6	9.3	chr10	101819018	101819314	(31978108)	C	L2c	LINE/L2	(108)	3267	2973	525734
347	21.6	2.6	0.0	chr10	102046690	102046763	(31750659)	C	MIR	SINE/MIR	(186)	76	1	526160
2073	20.2	5.0	4.5	chr10	102455857	102456339	(31341083)	+	MLT1D	LTR/ERVL-MaLR	21	505	(0)	526962
355	17.8	14.1	0.0	chr10	102715529	102715601	(31081821)	C	L2a	LINE/L2	(37)	3389	3305	527440
1718	13.8	7.4	2.7	chr10	102715664	102715959	(31081463)	+	AluJo	SINE/Alu	1	311	(1)	527441
186	33.9	3.1	1.6	chr10	103888762	103888887	(29908535)	+	MER5B	DNA/hAT-Charlie	51	178	(0)	529845
308	27.4	7.9	2.5	chr10	103918661	103918780	(29878642)	+	MamRep4096	DNA/hAT-Tip100	3	129	(297)	529891
3071	14.2	7.9	4.9	chr10	104252957	104253548	(29543874)	C	LTR36	LTR/ERV1	(0)	611	1	530420
451	27.6	20.7	0.5	chr10	109976793	109976996	(23820426)	C	MIR	SINE/MIR	(0)	262	7	538709
776	28.9	1.6	5.2	chr10	110003453	110003704	(23793718)	C	MIRc	SINE/MIR	(4)	264	22	538767
330	28.6	10.7	2.2	chr10	110031315	110031536	(23765886)	C	MIR	SINE/MIR	(17)	245	3	538810
546	32.1	0.6	3.5	chr10	110061744	110061914	(23735508)	C	MIR3	SINE/MIR	(10)	198	33	538857
1789	15.8	1.0	2.4	chr10	110061945	110062080	(23735342)	+	AluJb	SINE/Alu	1	134	(178)	538858
585	21.8	5.5	0.6	chr10	110163341	110163497	(23633925)	+	MER103C	DNA/hAT-Charlie	88	252	(45)	539007
302	27.8	1.0	3.0	chr10	110163459	110163558	(23633864)	C	MER103C	DNA/hAT-Charlie	(198)	99	2	539008
764	24.6	8.9	0.0	chr10	110163682	110163917	(23633505)	+	MER112	DNA/hAT-Charlie	3	261	(0)	539009
22	22.1	0.0	3.6	chr10	110207604	110207659	(23589763)	+	(CA)n	Simple_repeat	1	56	(0)	539103
16	0.0	0.0	0.0	chr10	110211074	110211090	(23586332)	+	(T)n	Simple_repeat	1	17	(0)	539109
259	23.5	19.1	6.4	chr10	110216331	110216439	(23580983)	C	L2a	LINE/L2	(0)	3426	3301	539119
198	26.1	0.0	0.0	chr10	110221958	110222003	(23575419)	C	UCON80_AMi	Unknown	(32)	190	145	539131
465	20.1	3.9	2.8	chr10	110497263	110497403	(23300019)	C	L1MC5	LINE/L1	(14)	9290	9163	539646
19	2.6	6.8	6.4	chr10	110498077	110498121	(23299301)	+	(GCG)n	Simple_repeat	1	45	(0)	539648
1849	25.2	7.1	1.7	chr10	110618772	110619291	(23178131)	C	MLT1H1	LTR/ERVL-MaLR	(5)	550	1	539871
422	26.2	9.2	5.6	chr10	110629579	110629756	(23167666)	+	MIRb	SINE/MIR	14	198	(70)	539895
1869	24.2	1.3	0.0	chr10	110632450	110632829	(23164593)	+	MLT1E2	LTR/ERVL-MaLR	243	627	(0)	539902
818	31.4	2.1	2.6	chr10	110632830	110633209	(23164213)	C	ERV3-16A3_I-int	LTR/ERVL	(2352)	3315	2834	539903
265	32.5	1.2	0.0	chr10	110666668	110666747	(23130675)	C	MIRb	SINE/MIR	(173)	95	15	539962
300	26.2	19.6	0.6	chr10	110667009	110667169	(23130253)	+	MIRb	SINE/MIR	34	232	(36)	539963
330	28.6	1.0	1.0	chr10	110802852	110802950	(22994472)	+	MIRc	SINE/MIR	45	143	(125)	540179
240	29.5	1.3	1.3	chr10	110916520	110916598	(22880824)	C	AmnSINE1	SINE/5S-Deu-L2	(181)	394	316	540368
29	12.3	0.0	0.0	chr10	112134566	112134609	(21662813)	+	(CA)n	Simple_repeat	1	44	(0)	542194
2071	23.1	7.5	3.4	chr10	112134658	112135271	(21662151)	+	L1MC5	LINE/L1	8664	9304	(0)	542195
558	28.6	7.2	5.5	chr10	113391393	113391610	(20405812)	C	MIRb	SINE/MIR	(34)	234	13	544237
336	35.5	4.5	4.0	chr10	113425785	113426007	(20371415)	C	MIRc	SINE/MIR	(38)	230	7	544291
511	29.0	6.8	1.5	chr10	113855833	113856028	(19941394)	C	MIR	SINE/MIR	(48)	214	8	544981
3069	22.1	8.2	3.2	chr10	114175167	114176262	(19621160)	+	L1MC5a	LINE/L1	982	2137	(640)	545513
1445	21.6	4.4	0.6	chr10	114375035	114375360	(19422062)	+	MER58B	DNA/hAT-Charlie	1	339	(2)	545841
1298	18.0	2.6	1.9	chr10	114375370	114375640	(19421782)	C	MER58D	DNA/hAT-Charlie	(55)	331	59	545842
3153	19.9	0.8	0.2	chr10	114648076	114648698	(19148724)	+	L1MB7	LINE/L1	5539	6165	(19)	546277
2002	13.0	0.0	1.4	chr10	114649116	114649399	(19148023)	+	AluSz	SINE/Alu	1	280	(32)	546279
61	0.0	0.0	0.0	chr10	114649401	114649455	(19147967)	+	(AAAT)n	Simple_repeat	1	55	(0)	546280
298	30.1	3.8	5.6	chr10	114649456	114649489	(19147933)	+	MIR3	SINE/MIR	152	185	(23)	546278
2137	16.5	1.0	0.3	chr10	114686618	114686926	(19110496)	C	AluJo	SINE/Alu	(1)	311	1	546338
372	26.3	6.8	1.4	chr10	114687126	114687264	(19110158)	+	MER103C	DNA/hAT-Charlie	91	237	(60)	546339
228	31.1	9.1	1.1	chr10	114687331	114687421	(19110001)	C	MIR3	SINE/MIR	(23)	185	87	546340
2166	14.5	2.1	1.2	chr10	114755043	114755378	(19042044)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	546467
1097	26.0	7.3	4.8	chr10	114779507	114779962	(19017460)	C	L1ME3G	LINE/L1	(155)	769	302	546507
198	22.6	12.3	7.0	chr10	117148345	117148444	(16648978)	C	MIR1_Amn	SINE/MIR	(0)	230	125	549954
65	21.4	0.0	0.0	chr10	117542303	117542494	(16254928)	+	GA-rich	Low_complexity	1	192	(0)	550654
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
991	16.9	2.7	2.7	chr10	118735375	118735562	(15061860)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	552508
2127	11.1	1.1	0.0	chr10	119091870	119092148	(14705274)	C	AluSc8	SINE/Alu	(29)	282	1	553185
414	27.7	3.7	2.3	chr10	119092277	119092409	(14705013)	+	L2b	LINE/L2	3241	3375	(0)	553186
629	16.2	16.2	0.9	chr10	119092424	119092566	(14704856)	+	MLT1E3	LTR/ERVL-MaLR	1	161	(463)	553187
1932	10.1	1.7	5.5	chr10	119139252	119139558	(14657864)	+	AluSx3	SINE/Alu	1	295	(16)	553308
30	0.0	0.0	0.0	chr10	119253848	119253873	(14543549)	+	(GT)n	Simple_repeat	1	26	(0)	553558
181	34.6	4.9	0.0	chr10	119274781	119274858	(14522564)	+	MIR1_Amn	SINE/MIR	22	103	(127)	553598
16	13.3	2.1	6.2	chr10	119651217	119651263	(14146159)	+	(CCGCGC)n	Simple_repeat	1	48	(0)	554324
199	36.5	0.0	5.6	chr10	119654964	119655053	(14142369)	+	MER5A	DNA/hAT-Charlie	80	164	(25)	554327
340	33.1	4.0	4.6	chr10	120978384	120978557	(12818865)	C	MER131	DNA?	(41)	174	2	556457
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
361	30.4	4.7	2.4	chr10	121833877	121834041	(11963381)	+	MER5B	DNA/hAT-Charlie	1	169	(9)	557777
1581	19.3	0.7	0.0	chr10	125473212	125473501	(8323921)	C	MER90a	LTR/ERV1	(0)	614	323	563576
860	29.3	1.9	0.8	chr10	125538994	125539251	(8258171)	+	MER130	DNA	1050	1310	(284)	563661
280	23.9	12.4	4.9	chr10	125633499	125633661	(8163761)	C	L1ME4c	LINE/L1	(39)	791	615	563809
434	31.2	9.6	2.3	chr10	125641226	125641524	(8155898)	C	L5	LINE/RTE-X	(25)	2240	1918	563818
594	22.8	13.2	3.0	chr10	125973636	125973906	(7823516)	C	L1ME3Cz	LINE/L1	(15)	982	680	564295
203	32.5	5.4	0.0	chr10	126460243	126460362	(7337060)	+	L2c	LINE/L2	3233	3364	(11)	564863
342	32.2	6.8	0.0	chr10	126500327	126500478	(7296944)	+	MIRb	SINE/MIR	71	233	(35)	564914
279	28.6	6.0	1.6	chr10	133359955	133360082	(437340)	+	Charlie22a	DNA/hAT-Charlie	60	193	(298)	572436
227	34.9	4.5	8.5	chr11	447995	448057	(134638565)	+	MIR	SINE/MIR	191	246	(16)	573400
298	27.9	6.3	5.5	chr11	3841790	3841899	(131244723)	C	L2b	LINE/L2	(2)	3373	3263	577812
13	12.1	7.7	2.4	chr11	3855142	3855180	(131231442)	+	(GGAGCTG)n	Simple_repeat	1	42	(0)	577859
283	21.9	3.0	1.0	chr11	7239168	7239264	(127847358)	C	MLT1L	LTR/ERVL-MaLR	(25)	585	487	582421
646	29.3	1.0	0.0	chr11	7239369	7239566	(127847056)	C	MLT1L	LTR/ERVL-MaLR	(320)	290	91	582421
21	0.0	0.0	0.0	chr11	7694804	7694826	(127391796)	+	(T)n	Simple_repeat	1	23	(0)	582966
498	21.6	3.3	1.7	chr11	7694889	7695006	(127391616)	C	L2a	LINE/L2	(0)	3426	3307	582967
611	31.7	13.3	9.0	chr11	9226130	9226464	(125860158)	C	L3	LINE/CR1	(1270)	2829	2440	585230
535	32.1	13.9	2.0	chr11	11847315	11847806	(123238816)	+	L2a	LINE/L2	2253	2812	(607)	589848
945	28.6	10.4	4.7	chr11	11876445	11876958	(123209664)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	1	589888
2551	20.5	2.5	0.9	chr11	12065920	12066461	(123020161)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	8	590174
278	22.6	8.3	11.9	chr11	12066519	12066669	(123019953)	+	MER5B	DNA/hAT-Charlie	33	177	(1)	590175
21	4.0	0.0	0.0	chr11	12814858	12814883	(122271739)	+	(TG)n	Simple_repeat	1	26	(0)	591362
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
385	20.6	2.1	1.1	chr11	15074580	15074672	(120011950)	C	MIR3	SINE/MIR	(70)	138	45	594897
1956	28.2	17.6	1.7	chr11	17011268	17012726	(118073896)	+	L2a	LINE/L2	1666	3406	(20)	597886
320	19.9	17.4	2.8	chr11	17013053	17013233	(118073389)	C	L2c	LINE/L2	(0)	3387	3163	597887
1512	26.2	3.4	7.0	chr11	17264065	17264491	(117822131)	C	ERV3-16A3_LTR	LTR/ERVL	(11)	411	1	598435
222	20.8	9.4	0.0	chr11	17798229	17798305	(117288317)	C	MIR3	SINE/MIR	(65)	165	81	599322
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
271	30.6	3.6	0.9	chr11	19953864	19953972	(115132650)	+	L2c	LINE/L2	3254	3365	(22)	603115
280	32.2	6.7	3.2	chr11	20013819	20014004	(115072618)	C	MIR3	SINE/MIR	(5)	203	11	603217
209	31.4	11.6	3.8	chr11	20112688	20112846	(114973776)	+	MIR3	SINE/MIR	7	179	(29)	603356
236	32.4	0.7	8.1	chr11	27202075	27202222	(107884400)	+	AmnSINE1	SINE/5S-Deu-L2	224	360	(215)	613572
690	20.6	5.1	14.9	chr11	30316029	30316290	(104770332)	C	MIRb	SINE/MIR	(0)	268	34	618275
1991	24.1	6.8	5.3	chr11	30316349	30317044	(104769578)	+	L1ME3	LINE/L1	5449	6221	(21)	618276
17	0.0	0.0	0.0	chr11	30488860	30488878	(104597744)	+	(AC)n	Simple_repeat	1	19	(0)	618544
11	25.3	0.0	2.5	chr11	32891782	32891821	(102194801)	+	A-rich	Low_complexity	1	40	(0)	622438
3981	9.7	2.7	3.0	chr11	33045670	33046263	(102040359)	C	LTR14B	LTR/ERVK	(0)	608	17	622707
286	24.8	9.5	13.6	chr11	34358636	34358789	(100727833)	+	Charlie4z	DNA/hAT-Charlie	1	147	(20)	625130
224	34.6	0.0	0.0	chr11	36426210	36426287	(98660335)	+	MIR	SINE/MIR	2	79	(183)	628445
396	30.8	8.1	2.3	chr11	36426317	36426509	(98660113)	+	MIR	SINE/MIR	60	257	(11)	628445
1585	20.5	4.9	0.9	chr11	43738893	43739227	(91347395)	C	MER65C	LTR/ERV1	(112)	349	1	638927
230	33.8	9.9	3.4	chr11	43739290	43739368	(91347254)	C	L2b	LINE/L2	(217)	3158	3078	638925
1834	15.8	9.8	1.3	chr11	43739369	43739741	(91346881)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	638928
198	25.7	13.2	7.1	chr11	45803818	45803972	(89282650)	C	MIR3	SINE/MIR	(14)	194	29	642810
963	12.9	10.4	0.6	chr11	46127204	46127367	(88959255)	C	MER20	DNA/hAT-Charlie	(0)	219	38	643332
438	23.1	1.6	4.7	chr11	46840297	46840423	(88246199)	+	L2a	LINE/L2	3304	3426	(0)	644747
227	11.6	10.4	0.0	chr11	46948677	46948719	(88137903)	+	UCON4	Unknown	73	120	(183)	644969
16	17.2	3.0	0.0	chr11	47177521	47177553	(87909069)	+	(GT)n	Simple_repeat	1	34	(0)	645386
13	20.9	0.0	4.8	chr11	47269595	47269636	(87816986)	+	(GCGCC)n	Simple_repeat	1	42	(0)	645590
16	9.7	0.0	0.0	chr11	47847635	47847664	(87238958)	+	(G)n	Simple_repeat	1	30	(0)	646890
672	23.9	1.1	5.4	chr11	57531118	57531303	(77555319)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	653920
6045	12.9	4.0	0.2	chr11	58925599	58926638	(76159984)	C	HERVK22-int	LTR/ERVK	(2013)	4824	3676	656121
13	4.8	0.0	4.2	chr11	59172094	59172117	(75914505)	+	(GGGA)n	Simple_repeat	1	24	(0)	656440
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
632	2.7	0.0	0.0	chr11	59556429	59556501	(75530121)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	656960
1192	26.9	15.1	3.9	chr11	59680594	59681165	(75405457)	+	L1MA6	LINE/L1	1776	2423	(4142)	657221
185	32.9	1.3	3.8	chr11	60699308	60699386	(74387236)	+	L2c	LINE/L2	3126	3202	(185)	658687
307	30.9	11.7	0.7	chr11	61588273	61588409	(73498213)	C	MIRb	SINE/MIR	(14)	254	101	660453
326	32.9	5.3	0.9	chr11	61588672	61588886	(73497736)	+	L2c	LINE/L2	2170	2394	(1025)	660454
310	30.4	9.5	2.8	chr11	61949208	61949383	(73137239)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	661150
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1936	8.1	6.5	0.0	chr11	62653500	62653758	(72432864)	+	AluSx	SINE/Alu	1	277	(35)	662482
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
28	26.6	0.0	0.0	chr11	64035370	64035443	(71051179)	+	(TGAA)n	Simple_repeat	1	74	(0)	664892
315	24.0	7.0	4.3	chr11	64152951	64153101	(70933521)	C	MIRb	SINE/MIR	(39)	191	31	665069
931	13.4	0.0	0.0	chr11	64270649	64270782	(70815840)	+	FRAM	SINE/Alu	1	134	(42)	665282
37	0.0	0.0	0.0	chr11	64270901	64270932	(70815690)	+	(AC)n	Simple_repeat	1	32	(0)	665283
352	34.1	4.2	0.9	chr11	64420125	64420355	(70666267)	C	Tigger15a	DNA/TcMar-Tigger	(447)	268	30	665585
513	28.2	14.3	0.6	chr11	65382621	65383056	(69703566)	+	L2b	LINE/L2	2847	3374	(1)	667450
48	0.0	0.0	0.0	chr11	65472426	65472466	(69614156)	+	(GT)n	Simple_repeat	1	41	(0)	667604
321	32.7	6.7	2.9	chr11	65892042	65892189	(69194433)	C	MIRc	SINE/MIR	(77)	191	34	668361
2444	7.6	0.0	0.3	chr11	65895121	65895423	(69191199)	C	AluY	SINE/Alu	(9)	302	1	668367
190	25.4	9.5	0.0	chr11	65895433	65895499	(69191123)	C	MIR	SINE/MIR	(109)	153	80	668368
1666	16.0	5.8	3.9	chr11	65898685	65898990	(69187632)	+	AluJb	SINE/Alu	1	312	(0)	668379
11	28.4	0.0	0.0	chr11	66479958	66479996	(68606626)	+	(CAAGTCC)n	Simple_repeat	1	39	(0)	669605
35	24.7	2.6	5.1	chr11	66744642	66744682	(68341940)	+	(GGCGCG)n	Simple_repeat	1	64	(92)	670144
18	22.6	0.0	3.6	chr11	66744683	66744737	(68341885)	+	(GCGG)n	Simple_repeat	1	55	(0)	670145
501	32.5	9.3	0.0	chr11	66834095	66834288	(68252334)	C	MIRb	SINE/MIR	(22)	246	33	670355
740	25.2	9.9	1.4	chr11	67170882	67171102	(67915520)	+	MIR	SINE/MIR	3	244	(18)	671139
284	27.4	17.1	1.9	chr11	67317104	67317207	(67769415)	C	MIR3	SINE/MIR	(56)	152	30	671397
815	18.8	2.4	0.0	chr11	69048544	69048703	(66037919)	C	MER5A	DNA/hAT-Charlie	(20)	169	6	674460
462	24.6	7.6	1.6	chr11	73779051	73779174	(61307448)	+	MER94	DNA/hAT-Blackjack	1	132	(2)	682651
24	17.3	1.6	3.2	chr11	74398449	74398510	(60688112)	+	(CCGCCC)n	Simple_repeat	1	63	(0)	683975
275	29.5	3.0	0.4	chr11	75513513	75513577	(59573045)	+	MIRc	SINE/MIR	171	243	(25)	686234
2109	21.2	7.7	8.3	chr11	75946415	75946839	(59139783)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	171	687101
890	31.5	8.7	1.9	chr11	75949185	75949663	(59136959)	+	L2	LINE/L2	2073	2587	(832)	687106
2224	10.7	0.4	0.0	chr11	75951369	75951681	(59134941)	C	AluSp	SINE/Alu	(0)	313	1	687112
3711	26.3	10.9	5.1	chr11	75951682	75953129	(59133493)	C	L1ME2	LINE/L1	(1320)	4826	3271	687108
675	1.3	0.0	0.0	chr11	76235513	76235587	(58851035)	+	tRNA-Pro-CCY	tRNA	1	75	(0)	687581
614	2.7	0.0	0.0	chr11	76235824	76235896	(58850726)	C	tRNA-Pro-CCA	tRNA	(2)	73	1	687582
21	15.5	0.0	0.0	chr11	76782958	76782993	(58303629)	+	(CA)n	Simple_repeat	1	36	(0)	688673
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
11	14.1	10.3	0.0	chr11	76783236	76783274	(58303348)	+	(CGCCCGG)n	Simple_repeat	1	43	(0)	688675
608	33.2	4.5	6.4	chr11	77401589	77401977	(57684645)	+	L2c	LINE/L2	3001	3381	(6)	689792
189	28.3	9.1	0.0	chr11	77402055	77402114	(57684508)	C	MIR3	SINE/MIR	(57)	151	86	689793
188	24.6	6.8	8.0	chr11	77402251	77402325	(57684297)	+	MIRb	SINE/MIR	3	76	(192)	689794
410	28.1	1.7	0.9	chr11	77506939	77507053	(57579569)	+	L2a	LINE/L2	3305	3420	(6)	690053
1573	20.6	17.9	4.3	chr11	83043014	83043479	(52043143)	+	MLT1H	LTR/ERVL-MaLR	4	546	(3)	699913
491	28.5	4.8	3.2	chr11	86592853	86593037	(48493585)	+	MIRb	SINE/MIR	2	189	(79)	705799
180	31.4	12.7	7.2	chr11	88357628	88357850	(46728772)	+	L2c	LINE/L2	3144	3380	(7)	708440
569	22.9	7.9	0.7	chr11	91653097	91653237	(43433385)	C	L1M1	LINE/L1	(7196)	369	218	713027
3339	19.0	3.0	1.6	chr11	91653213	91653839	(43432783)	C	L1M1	LINE/L1	(6910)	655	20	713026
453	30.9	1.1	1.1	chr11	92826453	92826629	(42259993)	+	L1ME1	LINE/L1	6001	6177	(2)	714736
7025	6.9	1.9	4.9	chr11	93946087	93948225	(41138397)	C	SVA_F	Retroposon/SVA	(0)	1375	57	716443
28	3.3	0.0	0.0	chr11	93948226	93948256	(41138366)	+	(GGGAGA)n	Simple_repeat	1	31	(0)	716444
475	30.5	4.0	7.4	chr11	93948317	93948574	(41138048)	C	MER103C	DNA/hAT-Charlie	(0)	297	49	716445
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
190	30.6	10.8	4.2	chr11	94960591	94960708	(40125914)	C	MIR	SINE/MIR	(24)	238	105	717922
458	27.4	6.2	3.0	chr11	94960709	94960941	(40125681)	+	MIR	SINE/MIR	1	247	(21)	717923
2391	6.2	0.0	2.3	chr11	95107663	95107966	(39978656)	C	AluSc8	SINE/Alu	(14)	297	1	718147
208	21.2	12.1	7.0	chr11	95521651	95521736	(39564886)	+	MamTip2	DNA/hAT-Tip100	69	159	(146)	718757
333	33.3	3.4	6.6	chr11	95522926	95523166	(39563456)	C	L2c	LINE/L2	(839)	2580	2348	718752
595	24.9	16.2	1.0	chr11	95523202	95523404	(39563218)	+	MIR	SINE/MIR	2	241	(21)	718760
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
2316	4.7	2.8	0.7	chr11	102293838	102294117	(32792505)	C	L1PA8	LINE/L1	(1)	6171	5886	727718
8153	20.6	8.5	6.8	chr11	103069077	103072205	(32014417)	+	L1MDa	LINE/L1	36	4527	(2010)	728947
5011	6.2	2.8	0.1	chr11	103072206	103072328	(32014294)	+	L1PA5	LINE/L1	5471	5608	(546)	728948
40	6.3	0.0	0.0	chr11	103072329	103072378	(32014244)	+	(GATCTA)n	Simple_repeat	1	50	(0)	728949
5011	6.2	2.8	0.1	chr11	103072379	103072918	(32013704)	+	L1PA5	LINE/L1	5609	6151	(3)	728948
274	30.7	9.8	1.0	chr11	108883129	108883230	(26203392)	C	MIR1_Amn	SINE/MIR	(113)	117	6	737536
186	32.5	17.1	1.2	chr11	110303506	110303667	(24782955)	C	L2c	LINE/L2	(64)	3323	3131	739596
12	18.4	0.0	5.6	chr11	111426258	111426293	(23660329)	+	GA-rich	Low_complexity	1	36	(0)	741363
1197	22.6	10.4	0.7	chr11	111946391	111946660	(23139962)	C	AluSz	SINE/Alu	(13)	299	1	742261
1087	28.5	5.1	2.4	chr11	113001736	113002116	(22084506)	C	MLT1K	LTR/ERVL-MaLR	(23)	572	181	743957
32	27.5	0.8	4.0	chr11	113314454	113314577	(21772045)	+	(CCCGGC)n	Simple_repeat	1	125	(0)	744365
3936	16.4	1.8	2.2	chr11	113664596	113664737	(21421885)	C	L1MB7	LINE/L1	(0)	6682	6540	744950
2138	13.3	14.8	0.0	chr11	113664738	113665105	(21421517)	+	LTR47A2	LTR/ERVL	1	432	(0)	744951
371	28.4	19.5	0.0	chr11	113906309	113906519	(21180103)	+	MIRc	SINE/MIR	2	263	(5)	745370
16	9.1	0.0	3.9	chr11	114162872	114162897	(20923725)	+	(TC)n	Simple_repeat	1	26	(0)	745822
12	18.3	5.4	0.0	chr11	115084250	115084286	(20002336)	+	(CTCTC)n	Simple_repeat	1	39	(0)	747151
460	28.8	3.4	9.5	chr11	115476435	115476618	(19610004)	C	Tigger19a	DNA/TcMar-Tigger	(111)	212	40	747689
21089	10.1	2.7	0.9	chr11	116023289	116029763	(19056859)	+	L1PB1	LINE/L1	261	6864	(3)	748573
1918	22.0	2.5	1.6	chr11	116946256	116946698	(18139924)	C	LTR40b	LTR/ERVL	(15)	447	1	750188
966	17.8	13.3	0.7	chr11	116962677	116962959	(18123663)	+	MER33	DNA/hAT-Charlie	1	324	(0)	750225
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
14	17.6	0.0	6.7	chr11	118929552	118929596	(16157026)	+	(TCCCCC)n	Simple_repeat	1	45	(0)	753878
415	32.8	0.8	0.0	chr11	119717967	119718088	(15368534)	C	Tigger19a	DNA/TcMar-Tigger	(19)	304	182	755349
71	20.8	0.0	0.7	chr11	120347119	120347265	(14739357)	+	(CTTT)n	Simple_repeat	1	147	(0)	756404
43	0.0	0.0	0.0	chr11	120347271	120347307	(14739315)	+	(TG)n	Simple_repeat	1	37	(0)	756405
184	38.7	3.1	0.0	chr11	120404133	120404225	(14682397)	+	L2	LINE/L2	2317	2412	(1007)	756499
15	30.5	0.0	0.0	chr11	120404350	120404391	(14682231)	+	(AT)n	Simple_repeat	1	42	(0)	756500
447	30.1	11.9	0.5	chr11	122633035	122633245	(12453377)	C	MIR	SINE/MIR	(16)	252	2	759908
15	12.2	0.0	0.0	chr11	122633281	122633307	(12453315)	+	(TGA)n	Simple_repeat	1	27	(0)	759909
749	22.3	1.7	7.9	chr11	123213206	123213283	(11873339)	+	MER45A	DNA/hAT-Tip100	103	178	(0)	761092
1439	24.2	1.9	7.9	chr11	123213284	123213660	(11872962)	+	LTR37B	LTR/ERV1	120	466	(2)	761091
31	20.8	0.0	0.0	chr11	123741468	123741535	(11345087)	+	(CCCGG)n	Simple_repeat	1	68	(0)	762084
12	25.6	0.0	0.0	chr11	124876298	124876334	(10210288)	+	G-rich	Low_complexity	1	37	(0)	763704
627	22.8	2.5	3.5	chr11	124962364	124962563	(10124059)	+	L1MC5	LINE/L1	9088	9285	(19)	763828
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
494	30.2	4.9	0.2	chr11	126133529	126133712	(8952910)	+	MIR3	SINE/MIR	15	206	(2)	765573
56	9.8	0.0	3.2	chr11	126147156	126147250	(8939372)	+	(CCCT)n	Simple_repeat	1	95	(0)	765595
656	22.8	12.4	1.6	chr11	126481020	126481206	(8605416)	C	L2a	LINE/L2	(15)	3411	3202	766152
401	30.4	6.6	3.9	chr11	126585959	126586136	(8500486)	+	AmnSINE1	SINE/5S-Deu-L2	313	495	(80)	766326
302	25.4	3.5	12.1	chr11	130637228	130637300	(4449322)	C	MIR	SINE/MIR	(3)	259	194	772202
15	19.9	0.0	0.0	chr12	751084	751112	(132524197)	+	A-rich	Low_complexity	1	29	(0)	779402
242	30.1	15.7	2.8	chr12	760321	760535	(132514774)	+	MIRc	SINE/MIR	6	253	(15)	779415
390	27.1	3.1	7.6	chr12	774557	774746	(132500563)	C	L1ME4c	LINE/L1	(403)	427	290	779448
2375	9.8	0.0	0.7	chr12	792306	792612	(132482697)	C	AluSx3	SINE/Alu	(5)	306	2	779489
45	25.6	3.8	4.5	chr12	991143	991354	(132283955)	+	(CGG)n	Simple_repeat	1	220	(0)	779868
2893	33.4	9.0	3.2	chr12	1217618	1218877	(132056432)	+	L2a	LINE/L2	971	2287	(1132)	780319
1564	10.6	17.5	0.0	chr12	2813042	2813286	(130462023)	C	AluSx1	SINE/Alu	(15)	297	1	782699
868	13.6	3.4	0.0	chr12	4571674	4571842	(128703467)	+	MER33	DNA/hAT-Charlie	150	324	(0)	785722
235	35.9	1.7	0.0	chr12	4571845	4571961	(128703348)	+	L2a	LINE/L2	3303	3421	(5)	785723
321	23.1	10.3	6.3	chr12	4571978	4572088	(128703221)	C	L2a	LINE/L2	(0)	3426	3311	785723
273	21.7	0.0	3.2	chr12	4572196	4572257	(128703052)	C	MER5B	DNA/hAT-Charlie	(0)	178	119	785724
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
18	0.0	0.0	0.0	chr12	6345436	6345455	(126929854)	+	(CA)n	Simple_repeat	1	20	(0)	788519
227	26.6	0.0	6.0	chr12	6345457	6345540	(126929769)	+	MIRc	SINE/MIR	12	91	(177)	788520
22	2.4	9.1	2.1	chr12	6533857	6533900	(126741409)	+	(CCCAGTG)n	Simple_repeat	1	48	(0)	788907
12	16.3	2.8	2.7	chr12	6556140	6556175	(126719134)	+	G-rich	Low_complexity	1	37	(0)	788936
33	0.0	0.0	0.0	chr12	6617995	6618022	(126657287)	+	(AC)n	Simple_repeat	1	28	(0)	789037
17	0.0	0.0	0.0	chr12	6618023	6618041	(126657268)	+	(CT)n	Simple_repeat	1	19	(0)	789038
24	12.0	0.0	0.0	chr12	6618041	6618076	(126657233)	+	(CA)n	Simple_repeat	1	36	(0)	789039
15	19.6	5.1	2.0	chr12	6764579	6764639	(126510670)	+	GA-rich	Low_complexity	1	62	(0)	789348
13	13.0	0.0	7.7	chr12	6867692	6867730	(126407579)	+	(GCCGG)n	Simple_repeat	1	39	(0)	789530
1822	13.7	8.9	4.4	chr12	6944852	6945194	(126330115)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	1	789679
619	26.0	0.0	5.2	chr12	6961639	6961792	(126313517)	C	MIR	SINE/MIR	(101)	161	16	789703
11	30.3	2.0	0.0	chr12	8697399	8697447	(124577862)	+	(CGGCCGG)n	Simple_repeat	1	50	(0)	792745
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
2036	16.4	7.6	1.4	chr12	10361565	10361996	(122913313)	C	MER65C	LTR/ERV1	(0)	461	1	795147
804	25.4	3.1	6.1	chr12	10395609	10395872	(122879437)	+	LTR41C	LTR/ERVL	1	256	(445)	795189
254	28.5	5.8	6.5	chr12	11059864	11060002	(122215307)	C	L2a	LINE/L2	(0)	3426	3289	796011
403	20.0	10.3	0.0	chr12	11174262	11174366	(122100943)	+	L2a	LINE/L2	3310	3426	(0)	796148
622	28.0	14.9	0.0	chr12	12172347	12172546	(121102763)	+	MamRTE1	LINE/RTE-BovB	3201	3435	(377)	797636
13	29.1	3.5	0.0	chr12	12505771	12505828	(120769481)	+	A-rich	Low_complexity	1	60	(0)	798260
12	12.3	5.1	4.9	chr12	12562720	12562758	(120712551)	+	G-rich	Low_complexity	1	41	(0)	798343
23	11.5	0.0	0.0	chr12	12562926	12562963	(120712346)	+	(CCT)n	Simple_repeat	1	38	(0)	798344
13	20.4	0.0	7.7	chr12	12562962	12563013	(120712296)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	798345
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
1299	13.6	1.8	2.7	chr12	12720612	12720831	(120554478)	C	MER20	DNA/hAT-Charlie	(1)	218	1	798631
11	24.1	0.0	0.0	chr12	12725318	12725351	(120549958)	+	(CGCCCC)n	Simple_repeat	1	34	(0)	798634
24	24.3	0.0	0.0	chr12	12725359	12725409	(120549900)	+	(TG)n	Simple_repeat	1	51	(0)	798635
11	21.7	7.3	1.7	chr12	12725648	12725702	(120549607)	+	(CCTCGCG)n	Simple_repeat	1	59	(0)	798636
453	28.9	1.9	5.9	chr12	12726875	12727095	(120548214)	+	L3	LINE/CR1	3886	4097	(2)	798638
1378	13.9	5.8	0.4	chr12	12727164	12727438	(120547871)	+	MER33	DNA/hAT-Charlie	34	324	(0)	798639
13	18.8	0.0	5.0	chr12	12840300	12840339	(120434970)	+	(TTTATAG)n	Simple_repeat	1	40	(0)	798876
216	35.0	14.4	0.7	chr12	14694336	14694479	(118580830)	+	MIRb	SINE/MIR	88	254	(14)	801772
419	29.4	6.7	0.0	chr12	14694478	14694603	(118580706)	C	MIRc	SINE/MIR	(133)	135	1	801773
276	15.4	0.0	0.0	chr12	22529687	22529725	(110745584)	+	MLT1J	LTR/ERVL-MaLR	100	138	(374)	812246
372	27.4	7.2	8.8	chr12	22529836	22530063	(110745246)	+	MLT1J	LTR/ERVL-MaLR	235	458	(54)	812246
12	19.3	4.7	2.2	chr12	24562109	24562151	(108713158)	+	(CCACCTC)n	Simple_repeat	1	45	(0)	815078
33	6.5	2.0	2.0	chr12	24562449	24562498	(108712811)	+	(TG)n	Simple_repeat	1	51	(0)	815079
16	22.7	3.4	1.6	chr12	24562499	24562550	(108712759)	+	(TCGC)n	Simple_repeat	3	55	(0)	815080
475	30.1	1.4	2.7	chr12	25328077	25328223	(107947086)	C	Charlie29a	DNA/hAT-Charlie	(303)	416	272	816317
483	22.9	1.4	5.9	chr12	25328263	25328415	(107946894)	C	Charlie29a	DNA/hAT-Charlie	(544)	175	30	816317
281	25.4	0.0	0.0	chr12	25334067	25334125	(107941184)	+	MamRep1151	LTR?	3	61	(648)	816330
16	11.2	7.1	4.4	chr12	26126103	26126144	(107149165)	+	(CG)n	Simple_repeat	1	45	(0)	817541
281	28.1	5.0	5.6	chr12	26164187	26164348	(107110961)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	817598
786	18.7	0.0	0.0	chr12	26164418	26164551	(107110758)	+	AluJr	SINE/Alu	161	294	(18)	817599
227	31.3	0.0	9.2	chr12	26298692	26298800	(106976509)	C	L2c	LINE/L2	(0)	3387	3289	817777
2397	4.9	0.4	2.8	chr12	27021862	27022149	(106253160)	+	AluY	SINE/Alu	1	281	(30)	818860
39	0.0	4.7	0.0	chr12	27022150	27022192	(106253117)	+	(AAAT)n	Simple_repeat	1	45	(0)	818861
537	17.6	0.0	1.1	chr12	27277265	27277355	(105997954)	+	FLAM_C	SINE/Alu	33	122	(21)	819306
35	0.0	0.0	0.0	chr12	27277393	27277422	(105997887)	+	(CA)n	Simple_repeat	1	30	(0)	819307
359	29.6	10.9	3.9	chr12	27279928	27280106	(105995203)	+	MIR	SINE/MIR	70	262	(0)	819313
7862	20.9	10.8	3.1	chr12	29350249	29352382	(103922927)	C	Cheshire	DNA/hAT-Charlie	(2)	2418	76	822250
407	35.0	10.6	8.4	chr12	31117578	31118801	(102156508)	C	L1MDa	LINE/L1	(5629)	1004	402	824695
13	31.2	1.0	6.1	chr12	31728865	31728961	(101546348)	+	(GGCGG)n	Simple_repeat	1	98	(0)	825911
1815	22.1	10.0	4.2	chr12	31749069	31749596	(101525713)	C	LTR8B	LTR/ERV1	(0)	820	259	825964
328	24.4	14.0	0.0	chr12	31749593	31749678	(101525631)	C	PrimLTR79	LTR/ERV1	(202)	301	202	825965
1888	12.6	6.2	0.0	chr12	32097864	32098148	(101177161)	C	AluSz	SINE/Alu	(7)	305	2	826825
3178	19.6	3.1	1.3	chr12	32098149	32098782	(101176527)	+	L1MB8	LINE/L1	5182	5822	(356)	826823
229	33.6	4.3	1.8	chr12	32754140	32754251	(100521058)	+	L2c	LINE/L2	3100	3214	(173)	828064
226	28.1	7.6	2.7	chr12	34336645	34336794	(98938515)	+	GSATII	Satellite/centr	30	187	(29)	830068
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
292	28.1	3.5	0.0	chr12	39047658	39047739	(94227570)	+	MER102a	DNA/hAT-Charlie	235	319	(11)	831874
16	5.2	0.0	0.0	chr12	42587938	42587957	(90687352)	+	(T)n	Simple_repeat	1	20	(0)	836899
13	18.9	0.0	0.0	chr12	45216357	45216386	(88058923)	+	GA-rich	Low_complexity	1	30	(0)	840513
293	40.5	2.3	1.7	chr12	45615361	45615536	(87659773)	C	L3b	LINE/CR1	(387)	4845	4669	841082
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
233	27.0	8.6	0.0	chr12	47413863	47413936	(85861373)	C	MIRb	SINE/MIR	(8)	260	180	843685
29	6.3	0.0	0.0	chr12	48212621	48212654	(85062655)	+	(TC)n	Simple_repeat	1	34	(0)	844874
2403	5.2	1.0	2.6	chr12	48717145	48717452	(84557857)	+	AluSx3	SINE/Alu	1	303	(8)	845624
244	37.1	8.7	1.9	chr12	49298753	49299073	(83976236)	+	L2	LINE/L2	2257	2601	(818)	846903
221	24.1	19.4	0.0	chr12	49347032	49347143	(83928166)	C	MIRb	SINE/MIR	(22)	186	48	847005
607	25.5	8.3	5.8	chr12	49358272	49358469	(83916840)	C	L1ME4c	LINE/L1	(308)	522	324	847026
611	29.4	4.0	4.4	chr12	49358470	49358751	(83916558)	C	L3b	LINE/CR1	(483)	3616	3422	847029
886	14.5	1.5	1.5	chr12	49365312	49365442	(83909867)	C	AluJo	SINE/Alu	(181)	131	1	847044
634	24.7	5.4	12.8	chr12	49404005	49404274	(83871035)	C	L2c	LINE/L2	(0)	3387	3140	847131
2147	15.5	2.6	0.0	chr12	49404275	49404577	(83870732)	C	AluJr	SINE/Alu	(0)	312	2	847132
396	37.0	4.0	1.6	chr12	50084770	50085011	(83190298)	+	MIRc	SINE/MIR	18	265	(3)	848383
14	24.9	0.0	0.0	chr12	50085032	50085070	(83190239)	+	G-rich	Low_complexity	1	39	(0)	848384
2224	21.7	6.5	20.2	chr12	50257924	50258332	(83016977)	C	L1MC4a	LINE/L1	(990)	7052	6670	848775
394	26.9	7.1	2.3	chr12	50400319	50400451	(82874858)	+	MIR	SINE/MIR	123	262	(0)	849134
282	33.0	1.1	0.0	chr12	50725220	50725307	(82550002)	+	MIRc	SINE/MIR	9	97	(171)	849874
23	8.8	0.0	0.0	chr12	50764042	50764077	(82511232)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	849956
2297	11.1	0.3	0.0	chr12	51011553	51011859	(82263450)	C	AluSg	SINE/Alu	(2)	308	1	850404
419	31.6	8.1	10.8	chr12	51371382	51371515	(81903794)	+	L2	LINE/L2	2942	3073	(346)	851224
1014	20.6	4.3	9.9	chr12	51683508	51683852	(81591457)	+	L2a	LINE/L2	3102	3426	(0)	851767
236	26.0	0.0	0.0	chr12	51683928	51683977	(81591332)	+	UCON85	Unknown	27	76	(4)	851768
1115	11.6	1.9	0.0	chr12	51875053	51875207	(81400102)	+	AluSx	SINE/Alu	136	293	(19)	852053
1130	18.2	7.3	0.0	chr12	51992991	51993232	(81282077)	C	L1MA9	LINE/L1	(0)	6312	6052	852277
2434	8.0	0.0	1.6	chr12	51993484	51993796	(81281513)	+	AluSc	SINE/Alu	2	309	(0)	852278
311	25.8	12.7	7.9	chr12	52004378	52004541	(81270768)	+	MIR3	SINE/MIR	36	208	(0)	852294
300	29.2	14.4	4.3	chr12	52903183	52903368	(80371941)	C	MIRb	SINE/MIR	(32)	236	29	853626
21	22.6	5.4	1.3	chr12	53052753	53052826	(80222483)	+	GA-rich	Low_complexity	1	78	(0)	853989
16	0.0	7.7	0.0	chr12	53252045	53252073	(80023236)	+	(GGGCG)n	Simple_repeat	1	31	(0)	854343
17	23.4	2.6	5.1	chr12	53252157	53252233	(80023076)	+	(GGAGCC)n	Simple_repeat	1	79	(0)	854344
187	32.1	7.9	5.4	chr12	53324658	53324805	(79950504)	+	L2b	LINE/L2	3217	3368	(7)	854489
566	21.0	0.0	0.0	chr12	53348916	53349015	(79926294)	+	AluJo	SINE/Alu	121	220	(92)	854527
494	11.1	13.2	0.0	chr12	53349035	53349106	(79926203)	C	AluSz6	SINE/Alu	(16)	296	214	854528
586	27.9	13.4	1.9	chr12	53678123	53678327	(79596982)	+	MIRb	SINE/MIR	32	263	(5)	855239
182	25.6	0.0	0.0	chr12	53678789	53678831	(79596478)	+	LFSINE_Vert	SINE/tRNA	245	287	(172)	855241
364	21.6	4.3	2.9	chr12	53770694	53770831	(79504478)	C	L1MC4	LINE/L1	(1)	8041	7902	855422
206	31.3	17.4	2.0	chr12	53869714	53869912	(79405397)	C	L3b	LINE/CR1	(50)	5182	4947	855587
11	21.6	0.0	4.9	chr12	54018715	54018755	(79256554)	+	(ACGCAC)n	Simple_repeat	1	41	(0)	855762
17	22.0	2.3	0.0	chr12	54032808	54032851	(79242458)	+	(TCCC)n	Simple_repeat	1	45	(0)	855768
13	0.0	5.0	0.0	chr12	54167362	54167381	(79107928)	+	(AAAC)n	Simple_repeat	1	21	(0)	855971
2485	17.3	5.3	2.6	chr12	54189564	54190062	(79085247)	C	MLT2B2	LTR/ERVL	(1)	514	2	856012
344	30.6	6.1	3.9	chr12	54201659	54201801	(79073508)	+	MIRc	SINE/MIR	2	156	(112)	856035
12	30.5	0.0	5.6	chr12	54391299	54391369	(78883940)	+	G-rich	Low_complexity	1	71	(0)	856367
15	14.0	4.9	2.3	chr12	54588677	54588717	(78686592)	+	(CCGCCC)n	Simple_repeat	1	43	(0)	856692
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
205	22.0	7.4	10.7	chr12	56150941	56151052	(77124257)	+	MIR	SINE/MIR	124	231	(31)	858982
13	23.1	0.0	0.0	chr12	56152593	56152628	(77122681)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	858986
16	17.3	2.6	0.0	chr12	56158139	56158177	(77117132)	+	(CCCCCGA)n	Simple_repeat	1	40	(0)	858993
295	22.0	17.4	2.0	chr12	56196970	56197071	(77078238)	+	MARNA	DNA/TcMar-Mariner	117	237	(349)	859062
219	37.1	6.7	4.4	chr12	56197234	56197269	(77078040)	+	L2a	LINE/L2	2328	2361	(1058)	859063
272	21.9	0.0	8.8	chr12	56223992	56224071	(77051238)	C	MIRb	SINE/MIR	(186)	82	10	859121
202	28.2	17.0	0.0	chr12	57009117	57009194	(76266115)	+	L2c	LINE/L2	3256	3349	(38)	860542
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
1018	19.7	3.1	3.1	chr12	57457813	57458037	(75817272)	+	Charlie1	DNA/hAT-Charlie	1	225	(2556)	861362
467	19.0	7.6	0.8	chr12	57458044	57458110	(75817199)	+	Charlie1a	DNA/hAT-Charlie	1325	1393	(62)	861363
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
252	27.1	2.0	4.0	chr12	57782459	57782558	(75492751)	+	MIRc	SINE/MIR	168	265	(3)	861818
504	27.3	8.3	8.3	chr12	57848944	57849171	(75426138)	C	MIRc	SINE/MIR	(32)	236	9	861922
334	35.9	7.6	3.9	chr12	57849235	57849463	(75425846)	+	L2b	LINE/L2	3120	3357	(18)	861923
13	15.4	6.7	2.1	chr12	58925410	58925454	(74349855)	+	A-rich	Low_complexity	1	48	(0)	863400
3324	18.7	2.9	3.3	chr12	62803364	62804195	(70471114)	+	L1M3	LINE/L1	3882	5429	(813)	868506
1507	22.2	6.5	6.1	chr12	63420255	63420769	(69854540)	C	LTR55	LTR/ERVL?	(5)	543	25	869383
207	32.5	1.2	5.9	chr12	63913978	63914062	(69361247)	+	L2c	LINE/L2	3260	3340	(47)	870187
336	31.1	6.2	9.7	chr12	63914159	63914343	(69360966)	+	L2c	LINE/L2	3210	3387	(0)	870188
596	27.1	8.1	0.0	chr12	64120295	64120464	(69154845)	C	L1MB1	LINE/L1	(6440)	663	479	870520
505	29.2	8.9	7.2	chr12	64120634	64120995	(69154314)	C	L1MB1	LINE/L1	(6713)	390	22	870520
366	23.8	3.7	3.7	chr12	64609274	64609382	(68665927)	+	MIRc	SINE/MIR	102	210	(58)	871473
434	25.6	14.3	0.6	chr12	65173432	65173612	(68101697)	+	MIRc	SINE/MIR	2	211	(57)	872399
441	33.6	4.0	2.2	chr12	65602915	65603138	(67672171)	+	L2a	LINE/L2	3146	3414	(12)	873029
41	10.9	1.3	2.6	chr12	65603794	65603868	(67671441)	+	(AAGG)n	Simple_repeat	1	76	(0)	873030
804	31.8	1.9	2.6	chr12	65606635	65606902	(67668407)	+	MIRb	SINE/MIR	3	268	(0)	873035
16	5.3	0.0	0.0	chr12	65640583	65640602	(67634707)	+	(A)n	Simple_repeat	1	20	(0)	873099
601	34.6	4.3	7.6	chr12	66060653	66061034	(67214275)	C	L2c	LINE/L2	(1)	3386	3018	873748
302	28.9	16.3	0.0	chr12	66107309	66107436	(67167873)	+	MamTip2	DNA/hAT-Tip100	105	257	(48)	873823
337	23.6	3.1	4.5	chr12	66107554	66107686	(67167623)	C	MER91B	DNA/hAT-Tip100	(45)	145	15	873824
376	28.4	11.1	5.5	chr12	66111909	66112306	(67163003)	+	L1ME4a	LINE/L1	5518	5940	(184)	873829
190	36.5	3.0	3.0	chr12	66319372	66319470	(66955839)	+	MIR	SINE/MIR	113	211	(51)	874207
196	33.3	10.6	0.0	chr12	67275773	67275865	(65999444)	+	L2b	LINE/L2	3272	3375	(0)	875663
241	29.9	2.5	2.5	chr12	67828184	67828303	(65447006)	+	L2c	LINE/L2	3230	3349	(38)	876488
423	22.2	5.8	2.4	chr12	67922778	67922902	(65352407)	C	MIRb	SINE/MIR	(32)	236	107	876602
1033	29.4	6.8	4.4	chr12	68531140	68531780	(64743529)	+	L1MEd	LINE/L1	638	1295	(4930)	877560
13	16.7	4.8	2.3	chr12	69470606	69470647	(63804662)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	879354
1148	20.5	2.3	0.8	chr12	70070585	70070844	(63204465)	C	MamGypsy2-I	LTR/Gypsy	(0)	4166	3903	880333
251	27.9	5.8	7.2	chr12	70251233	70251371	(63023938)	C	L2c	LINE/L2	(183)	3204	3068	880624
301	30.8	5.1	6.5	chr12	70367573	70367711	(62907598)	+	Charlie4z	DNA/hAT-Charlie	2	138	(29)	880784
204	34.1	0.0	6.6	chr12	71465915	71466005	(61809304)	+	L2c	LINE/L2	3285	3369	(18)	882338
16	7.0	6.7	0.0	chr12	71504120	71504149	(61771160)	+	(TTG)n	Simple_repeat	1	32	(0)	882399
187	28.2	7.2	3.7	chr12	71680083	71680163	(61595146)	C	MIRb	SINE/MIR	(52)	216	133	882658
804	26.9	13.7	4.1	chr12	75623579	75623859	(57651450)	+	LTR16	LTR/ERVL	1	332	(106)	887813
838	19.9	16.2	0.0	chr12	75623860	75624040	(57651269)	C	MER20	DNA/hAT-Charlie	(0)	219	4	887814
804	26.9	13.7	4.1	chr12	75624041	75624126	(57651183)	+	LTR16	LTR/ERVL	333	409	(29)	887813
547	25.0	4.9	3.5	chr12	75624159	75624361	(57650948)	C	Charlie7a	DNA/hAT-Charlie	(63)	209	4	887815
253	23.6	20.7	1.7	chr12	75635519	75635637	(57639672)	+	MIRb	SINE/MIR	117	256	(6)	887834
293	24.6	0.0	0.0	chr12	75635624	75635680	(57639629)	C	L2a	LINE/L2	(12)	3414	3358	887835
765	25.6	11.3	0.4	chr12	75635767	75636025	(57639284)	C	LTR107_Mam	LTR	(180)	390	100	887836
380	32.2	13.9	2.0	chr12	76768242	76768393	(56506916)	+	MIR3	SINE/MIR	30	202	(6)	889821
952	13.4	9.5	0.0	chr12	76880014	76880185	(56395124)	C	MER20	DNA/hAT-Charlie	(0)	219	30	889998
277	36.6	12.1	4.5	chr12	79900946	79901188	(53374121)	C	L2c	LINE/L2	(2)	3385	3122	894220
410	19.4	5.4	0.0	chr12	79936381	79936475	(53338834)	C	L2a	LINE/L2	(4)	3422	3270	894283
1403	25.5	4.8	2.2	chr12	82329605	82329969	(50945340)	+	LTR40a	LTR/ERVL	145	519	(0)	897612
32	0.0	0.0	0.0	chr12	82686970	82686999	(50588310)	+	(GCTGGG)n	Simple_repeat	1	30	(0)	898090
246	31.3	13.5	2.6	chr12	82740534	82740802	(50534507)	C	LTR78	LTR/ERV1	(495)	809	507	898168
305	22.9	6.7	1.2	chr12	82862242	82862325	(50412984)	C	UCON73	Unknown	(3)	102	14	898369
486	29.7	2.0	0.7	chr12	82867942	82868090	(50407219)	+	MIRc	SINE/MIR	20	170	(98)	898376
220	34.8	4.3	0.0	chr12	85867198	85867286	(47408023)	+	MIR3	SINE/MIR	113	205	(3)	902226
316	23.3	5.8	2.8	chr12	89038544	89038686	(44236623)	C	MIRb	SINE/MIR	(103)	165	11	906367
332	27.3	4.3	6.0	chr12	89137915	89138031	(44137278)	+	LTR67B	LTR/ERVL	1	115	(505)	906534
333	22.0	6.3	4.1	chr12	89138033	89138155	(44137154)	+	MLT1J	LTR/ERVL-MaLR	435	560	(2)	906531
330	29.4	7.2	4.5	chr12	89251895	89252141	(44023168)	C	MLT1J	LTR/ERVL-MaLR	(155)	289	65	906699
14	14.9	2.9	1.4	chr12	89317221	89317259	(43958050)	+	A-rich	Low_complexity	1	39	(0)	906820
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
1126	32.3	10.8	6.1	chr12	89825707	89826576	(43448733)	C	L1M6	LINE/L1	(5568)	928	13	907646
1405	22.0	3.4	1.7	chr12	90062719	90063010	(43212299)	C	MLT1A0	LTR/ERVL-MaLR	(58)	307	11	908000
603	31.1	9.4	0.5	chr12	90063066	90063288	(43212021)	+	MLT1J2	LTR/ERVL-MaLR	185	429	(19)	908001
851	23.0	12.8	2.6	chr12	92080774	92081081	(41194228)	C	L2a	LINE/L2	(14)	3412	3069	910887
418	27.3	5.9	0.8	chr12	93090251	93090379	(40184930)	+	MIR3	SINE/MIR	21	156	(52)	912702
407	33.7	5.2	1.5	chr12	93090425	93090629	(40184680)	+	MIRc	SINE/MIR	43	255	(13)	912703
16	17.9	4.5	0.0	chr12	93316396	93316439	(39958870)	+	(CTAGTAC)n	Simple_repeat	1	46	(0)	913174
232	30.7	7.3	0.9	chr12	93468371	93468485	(39806824)	C	MIRb	SINE/MIR	(73)	195	73	913514
250	29.7	14.8	2.1	chr12	93468495	93468635	(39806674)	+	MIRc	SINE/MIR	93	254	(14)	913515
17	0.0	0.0	0.0	chr12	93468724	93468744	(39806565)	+	(TTA)n	Simple_repeat	1	21	(0)	913516
697	29.7	3.1	2.2	chr12	94147624	94147847	(39127462)	+	MIR	SINE/MIR	29	254	(8)	914749
185	29.1	4.8	3.7	chr12	94147857	94147938	(39127371)	+	L3b	LINE/CR1	5007	5089	(143)	914750
1332	27.6	4.4	1.0	chr12	94805524	94805915	(38469394)	+	L2a	LINE/L2	2995	3400	(26)	915871
480	25.0	0.9	0.0	chr12	94954557	94954660	(38320649)	C	MER117	DNA/hAT-Charlie	(32)	165	61	916181
498	26.0	16.3	1.5	chr12	95103052	95103254	(38172055)	+	MIR	SINE/MIR	24	262	(0)	916508
1892	14.9	0.4	1.1	chr12	95267741	95268015	(38007294)	+	AluJb	SINE/Alu	2	274	(38)	916861
2426	9.5	0.0	0.0	chr12	95413264	95413569	(37861740)	+	AluSz	SINE/Alu	1	306	(6)	917176
2032	13.7	0.0	10.6	chr12	95671319	95671695	(37603614)	+	MER1B	DNA/hAT-Charlie	1	337	(2)	917703
204	28.4	5.0	8.7	chr12	95943038	95943141	(37332168)	+	MIRb	SINE/MIR	71	170	(98)	918160
13	26.2	0.0	2.3	chr12	100142485	100142527	(33132782)	+	(CGC)n	Simple_repeat	1	43	(0)	924964
12	21.6	0.0	0.0	chr12	100142765	100142796	(33132513)	+	(CCACGG)n	Simple_repeat	1	32	(0)	924965
13	18.9	2.8	0.0	chr12	100199988	100200023	(33075286)	+	(CCGCTGG)n	Simple_repeat	1	37	(0)	925059
312	26.4	5.4	0.9	chr12	101857042	101857148	(31418161)	+	MIR3	SINE/MIR	68	179	(29)	928108
188	14.3	10.9	2.0	chr12	101857119	101857168	(31418141)	+	L3	LINE/CR1	4045	4099	(0)	928109
221	21.8	0.0	5.2	chr12	103667885	103667942	(29607367)	C	MIRc	SINE/MIR	(123)	145	91	931056
267	28.8	13.5	0.6	chr12	103667976	103668136	(29607173)	+	MIR	SINE/MIR	72	256	(6)	931057
412	27.1	2.8	6.7	chr12	103925177	103925324	(29349985)	+	MLT1N2	LTR/ERVL-MaLR	1	142	(420)	931548
2455	18.8	10.4	0.4	chr12	103925325	103925810	(29349499)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	931549
2902	14.5	4.8	0.8	chr12	105013985	105014506	(28260803)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(524)	544	1	933653
38	0.0	0.0	0.0	chr12	106075287	106075319	(27199990)	+	(AC)n	Simple_repeat	1	33	(0)	935560
203	29.5	1.6	1.6	chr12	106224148	106224209	(27051100)	C	MIR3	SINE/MIR	(5)	203	142	935844
2216	8.7	3.4	0.3	chr12	106724741	106725027	(26550282)	+	AluSx1	SINE/Alu	2	297	(15)	936724
783	15.9	22.6	6.5	chr12	106725028	106725059	(26550250)	+	L1MEi	LINE/L1	1595	1643	(569)	936723
435	20.4	2.1	6.1	chr12	106725063	106725161	(26550148)	C	MLT1G	LTR/ERVL-MaLR	(0)	595	501	936725
550	27.9	7.5	1.0	chr12	106725167	106725365	(26549944)	C	MLT1G	LTR/ERVL-MaLR	(369)	222	10	936725
13	11.7	3.6	0.0	chr12	107761083	107761110	(25514199)	+	(CCCGG)n	Simple_repeat	1	29	(0)	938826
16	15.3	0.0	2.6	chr12	108515292	108515329	(24759980)	+	(GGAGCCG)n	Simple_repeat	1	38	(0)	940467
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
13	22.8	5.9	0.0	chr12	109154601	109154651	(24120658)	+	G-rich	Low_complexity	1	54	(0)	941880
295	28.7	6.2	2.0	chr12	109289058	109289204	(23986105)	C	MIRb	SINE/MIR	(30)	238	83	942205
964	19.8	9.8	0.0	chr12	109289225	109289426	(23985883)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	942206
655	28.1	6.1	6.9	chr12	109821329	109821538	(23453771)	+	L2b	LINE/L2	3017	3219	(156)	943386
59	12.1	4.1	2.3	chr12	110124162	110124284	(23151025)	+	(GCCCC)n	Simple_repeat	1	128	(0)	944095
15	28.0	0.0	0.0	chr12	110124288	110124326	(23150983)	+	(GC)n	Simple_repeat	1	39	(0)	944096
2377	10.3	0.7	0.0	chr12	110223476	110223785	(23051524)	+	AluSp	SINE/Alu	2	313	(0)	944291
211	25.5	20.3	5.6	chr12	110450531	110450569	(22824740)	+	L2a	LINE/L2	3106	3145	(281)	944771
2279	6.2	6.4	0.0	chr12	110450570	110450861	(22824448)	+	AluSx1	SINE/Alu	1	312	(0)	944772
556	27.8	14.8	1.4	chr12	110741671	110741910	(22533399)	+	MIR	SINE/MIR	1	262	(0)	945396
16	20.3	0.0	0.0	chr12	110742795	110742829	(22532480)	+	(GGC)n	Simple_repeat	1	35	(0)	945398
912	27.9	11.8	1.0	chr12	111404082	111404565	(21870744)	+	L2a	LINE/L2	2832	3384	(42)	947027
649	28.1	0.9	5.2	chr12	113136345	113136577	(20138732)	C	MIR	SINE/MIR	(0)	262	40	950874
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
522	19.1	6.4	2.2	chr12	113222083	113222216	(20053093)	+	MIR3	SINE/MIR	17	156	(52)	951100
318	21.3	20.1	1.6	chr12	113222250	113222375	(20052934)	+	MIR	SINE/MIR	5	160	(48)	951101
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
949	16.7	9.6	2.0	chr12	115060078	115060279	(18215030)	+	MER20	DNA/hAT-Charlie	1	219	(0)	955162
187	27.3	0.0	5.7	chr12	116145371	116145440	(17129869)	+	MIR3	SINE/MIR	143	208	(0)	957424
1681	16.8	4.3	1.4	chr12	116145495	116145659	(17129650)	C	AluJr	SINE/Alu	(11)	301	131	957425
384	30.6	3.6	2.9	chr12	116243733	116243870	(17031439)	+	MIRc	SINE/MIR	8	146	(122)	957577
713	24.3	18.2	4.7	chr12	116243867	116244225	(17031084)	+	L3	LINE/CR1	2530	2947	(1152)	957578
4753	25.6	8.8	3.8	chr12	116244302	116244669	(17030640)	+	HAL1	LINE/L1	2	373	(2134)	957579
1851	18.6	0.0	1.0	chr12	116244670	116244981	(17030328)	+	AluJb	SINE/Alu	2	310	(2)	957580
13	17.8	5.3	0.0	chr12	116534396	116534433	(16740876)	+	(CCCCT)n	Simple_repeat	1	40	(0)	958311
24	6.5	0.0	0.0	chr12	116658843	116658874	(16616435)	+	(CT)n	Simple_repeat	1	32	(0)	958631
2517	7.2	0.3	0.0	chr12	116659114	116659418	(16615891)	+	AluSg7	SINE/Alu	2	307	(2)	958632
5168	7.4	1.1	1.3	chr12	116754127	116755347	(16519962)	C	L1PB1	LINE/L1	(155)	6712	5499	958850
14504	9.8	2.2	0.5	chr12	116756445	116760863	(16514446)	C	L1PB1	LINE/L1	(2110)	4752	252	958850
15	32.4	1.1	3.3	chr12	116819327	116819415	(16455894)	+	(GGCCCGG)n	Simple_repeat	1	90	(0)	959020
1463	20.9	15.6	6.2	chr12	116874510	116874976	(16400333)	+	MLT1G3	LTR/ERVL-MaLR	1	535	(60)	959172
200	16.9	3.3	10.6	chr12	116879996	116880061	(16395248)	+	L2b	LINE/L2	3294	3354	(21)	959181
193	19.1	2.3	0.0	chr12	116880162	116880203	(16395106)	+	L2b	LINE/L2	3368	3410	(16)	959181
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
538	20.1	6.7	3.5	chr12	116935636	116935779	(16339530)	+	L1MC5a	LINE/L1	2629	2777	(0)	959317
1530	12.0	10.7	2.6	chr12	118101852	118102117	(15173192)	+	AluJr	SINE/Alu	1	290	(22)	961847
501	27.2	11.2	1.0	chr12	118102372	118102564	(15172745)	C	MER102c	DNA/hAT-Charlie	(15)	316	102	961848
14	25.6	1.7	3.3	chr12	118104038	118104096	(15171213)	+	(GCCGG)n	Simple_repeat	1	60	(0)	961850
2122	7.6	2.7	1.0	chr12	120292321	120292608	(12982701)	+	AluSg4	SINE/Alu	1	293	(17)	966632
226	24.5	0.0	0.0	chr12	120495928	120495980	(12779329)	+	LTR71B	LTR/ERV1	309	361	(249)	967223
417	28.9	11.8	2.5	chr12	120535127	120535325	(12739984)	C	MIR	SINE/MIR	(40)	222	3	967328
748	26.2	2.3	6.2	chr12	120647210	120647386	(12627923)	C	MIRb	SINE/MIR	(24)	244	73	967589
517	25.2	7.6	0.0	chr12	120791811	120791969	(12483340)	C	L1M5	LINE/L1	(448)	5676	5505	967867
622	24.6	18.3	1.1	chr12	120791989	120792268	(12483041)	C	L2a	LINE/L2	(11)	3415	3077	967868
19	16.8	2.0	3.9	chr12	121352690	121352740	(11922569)	+	(GTT)n	Simple_repeat	1	52	(0)	969185
782	16.2	4.4	1.3	chr12	121352743	121352896	(11922413)	C	FAM	SINE/Alu	(14)	171	13	969186
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
444	29.9	6.0	0.0	chr12	121630914	121631070	(11644239)	+	Tigger19a	DNA/TcMar-Tigger	132	298	(25)	969877
13	29.0	0.0	4.9	chr12	121631204	121631264	(11644045)	+	(ATTGCT)n	Simple_repeat	1	61	(0)	969878
237	32.8	4.9	0.8	chr12	121798105	121798221	(11477088)	+	MIRb	SINE/MIR	5	126	(142)	970347
562	21.1	6.0	5.5	chr12	121798983	121799163	(11476146)	+	MER5A	DNA/hAT-Charlie	8	189	(0)	970348
20	13.9	0.0	0.0	chr12	121805690	121805721	(11469588)	+	(T)n	Simple_repeat	1	32	(0)	970357
465	24.3	15.4	1.1	chr12	121859265	121859447	(11415862)	+	MIRb	SINE/MIR	36	249	(19)	970490
427	28.0	9.3	0.0	chr12	121859553	121859725	(11415584)	C	MIRb	SINE/MIR	(25)	205	14	970491
841	28.6	11.3	2.6	chr12	122072271	122072736	(11202573)	+	HAL1	LINE/L1	238	749	(1758)	971042
16	6.8	6.5	0.0	chr12	122835081	122835111	(10440198)	+	(TCCCCC)n	Simple_repeat	1	33	(0)	972808
296	21.2	3.0	1.5	chr12	123272293	123272359	(10002950)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	99	973658
2264	8.7	0.0	3.7	chr12	123584034	123584210	(9691099)	+	AluSz	SINE/Alu	134	310	(2)	974477
16	5.2	0.0	0.0	chr12	123588188	123588207	(9687102)	+	(T)n	Simple_repeat	1	20	(0)	974486
180	31.4	13.2	2.8	chr12	124353402	124353509	(8921800)	+	MamTip2	DNA/hAT-Tip100	21	141	(164)	975933
455	30.1	16.1	1.6	chr12	124353621	124353967	(8921342)	+	L2a	LINE/L2	3005	3382	(5)	975934
18	6.8	3.2	0.0	chr12	124564512	124564542	(8710767)	+	(CCACCC)n	Simple_repeat	1	32	(0)	976288
804	23.6	4.8	10.1	chr12	124694861	124695253	(8580056)	+	MLT1B	LTR/ERVL-MaLR	17	388	(2)	976601
679	1.4	0.0	0.0	chr12	124927842	124927915	(8347394)	C	tRNA-Phe-TTY	tRNA	(2)	74	1	977166
568	27.6	4.1	2.0	chr12	124928036	124928262	(8347047)	+	L2a	LINE/L2	3126	3424	(2)	977167
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
357	32.1	4.1	6.5	chr12	130836618	130836817	(2438492)	C	MIRc	SINE/MIR	(0)	268	74	987291
192	30.8	8.2	1.3	chr12	130836835	130836913	(2438396)	+	MIR3	SINE/MIR	110	194	(14)	987292
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
581	30.8	9.9	0.3	chr12	132238788	132239087	(1036222)	C	MER113	DNA/hAT-Charlie	(68)	453	122	989247
2419	5.8	0.0	0.3	chr12	132686453	132686747	(588562)	+	AluSx1	SINE/Alu	1	294	(18)	989771
1353	17.7	1.3	7.3	chr12	132686748	132686870	(588439)	C	AluJb	SINE/Alu	(196)	116	1	989770
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
29	27.3	2.5	6.0	chr12	132761991	132762152	(513157)	+	(GCGG)n	Simple_repeat	1	166	(0)	989909
439	18.3	1.9	0.9	chr12	132762410	132762514	(512795)	+	AluJb	SINE/Alu	2	107	(205)	989910
27	0.0	0.0	0.0	chr12	132828740	132828765	(446544)	+	(GCGGGA)n	Simple_repeat	1	26	(0)	990001
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
246	31.6	11.4	0.0	chr13	21139960	21140130	(93224198)	C	L1ME3B	LINE/L1	(964)	5182	4990	995595
337	27.9	12.5	0.0	chr13	24632435	24632581	(89731747)	C	MIRb	SINE/MIR	(71)	197	30	1000555
536	28.0	5.6	5.6	chr13	24632738	24632987	(89731341)	C	MIR	SINE/MIR	(12)	250	1	1000556
715	21.8	6.1	8.2	chr13	25887020	25887289	(88477039)	+	L1ME3A	LINE/L1	5903	6166	(7)	1002433
6108	8.8	2.5	1.8	chr13	27125487	27126431	(87237897)	+	L1P2	LINE/L1	5	956	(5228)	1004359
756	26.7	3.0	1.8	chr13	27549485	27549713	(86814615)	+	MIR	SINE/MIR	7	238	(24)	1005153
390	30.3	3.8	6.4	chr13	27636605	27636900	(86727428)	+	AmnSINE1	SINE/5S-Deu-L2	220	507	(68)	1005271
228	28.2	4.9	4.9	chr13	28336244	28336325	(86028003)	C	UCON62	DNA?	(95)	82	1	1006576
16	26.0	0.0	1.9	chr13	28718808	28718859	(85645469)	+	(CGCGG)n	Simple_repeat	1	52	(0)	1007214
470	24.0	7.7	2.0	chr13	28854574	28854769	(85509559)	C	Charlie2b	DNA/hAT-Charlie	(0)	2782	2575	1007430
783	29.1	6.2	0.6	chr13	28854800	28855131	(85509197)	+	LTR33A_	LTR/ERVL	178	529	(2)	1007431
240	32.7	8.3	0.9	chr13	29752331	29752441	(84611887)	C	CR1-L3A_Croc	LINE/CR1	(437)	3851	3732	1008573
220	28.2	4.9	0.0	chr13	29925574	29925651	(84438677)	C	MIR3	SINE/MIR	(3)	205	124	1008840
42	2.3	2.3	0.0	chr13	30125712	30125755	(84238573)	+	(TG)n	Simple_repeat	1	45	(0)	1009161
213	24.8	11.8	4.5	chr13	30125790	30125899	(84238429)	+	AmnSINE1	SINE/5S-Deu-L2	453	571	(4)	1009162
1170	16.7	14.9	0.4	chr13	31982423	31982698	(82381630)	C	MER33	DNA/hAT-Charlie	(1)	323	1	1012111
460	30.5	6.4	7.8	chr13	31982699	31982791	(82381537)	+	L2c	LINE/L2	3281	3370	(17)	1012110
370	27.5	2.7	4.0	chr13	31982851	31982998	(82381330)	+	LTR81A	LTR/Gypsy	28	173	(1177)	1012112
15	23.9	4.3	6.1	chr13	32587131	32587224	(81777104)	+	G-rich	Low_complexity	1	98	(0)	1013056
369	32.1	11.9	4.5	chr13	32851520	32851829	(81512499)	C	L2c	LINE/L2	(1)	3386	3051	1013440
1230	25.6	11.6	2.5	chr13	35882010	35882401	(78481927)	C	MLT1D	LTR/ERVL-MaLR	(17)	488	57	1017756
222	33.3	9.3	0.0	chr13	35882498	35882575	(78481753)	+	L2c	LINE/L2	2825	2910	(509)	1017757
4809	12.5	1.8	0.1	chr13	39329451	39330147	(75034181)	C	LTR62	LTR/ERVL	(0)	709	1	1022479
2373	14.7	1.4	0.0	chr13	39542847	39543254	(74821074)	C	L1MB4	LINE/L1	(8)	6172	5759	1022773
189	27.0	3.1	6.0	chr13	39543427	39543493	(74820835)	+	L2a	LINE/L2	3361	3425	(1)	1022774
1583	17.9	5.8	9.7	chr13	40964278	40964561	(73399767)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	188	1025002
240	25.8	13.6	0.0	chr13	41133076	41133164	(73231164)	+	MIR	SINE/MIR	109	211	(51)	1025318
10426	11.7	5.1	1.4	chr13	41370176	41371813	(72992515)	+	Tigger2	DNA/TcMar-Tigger	1018	2718	(0)	1025756
31	19.2	0.0	4.8	chr13	42049152	42049235	(72315093)	+	(GGCGG)n	Simple_repeat	1	84	(0)	1026764
11	23.8	8.5	0.0	chr13	43785834	43785892	(70578436)	+	(GTGGCC)n	Simple_repeat	1	64	(0)	1029331
189	26.9	9.7	8.8	chr13	44142384	44142485	(70221843)	C	MIRc	SINE/MIR	(50)	218	116	1029841
198	28.4	9.8	0.0	chr13	44142565	44142638	(70221690)	+	MIRb	SINE/MIR	106	187	(81)	1029842
245	13.7	5.5	0.0	chr13	44374530	44374580	(69989748)	+	L2b	LINE/L2	3322	3375	(0)	1030201
346	31.9	6.6	2.9	chr13	45781989	45782162	(68582166)	+	Plat_L3	LINE/CR1	3127	3307	(279)	1032822
308	22.7	26.5	0.0	chr13	46120032	46120203	(68244125)	+	MIRb	SINE/MIR	20	253	(15)	1033383
483	17.8	3.0	0.0	chr13	46613588	46613693	(67750635)	C	MER5B	DNA/hAT-Charlie	(6)	172	75	1034200
904	20.1	2.1	2.6	chr13	46794334	46794527	(67569801)	C	AluJr4	SINE/Alu	(12)	300	108	1034433
827	26.0	8.2	0.8	chr13	48838317	48838553	(65525775)	C	MIRb	SINE/MIR	(4)	264	9	1037417
12	15.3	5.3	2.5	chr13	48975985	48976022	(65388306)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	1037665
351	21.0	3.6	0.0	chr13	49240254	49240334	(65123994)	+	MIR	SINE/MIR	120	203	(59)	1038037
611	28.4	7.9	0.5	chr13	49240321	49240532	(65123796)	+	MIR	SINE/MIR	34	262	(0)	1038038
25	19.0	0.0	1.8	chr13	49792507	49792562	(64571766)	+	(GGC)n	Simple_repeat	1	56	(0)	1039048
17	3.5	3.2	3.1	chr13	50354686	50354716	(64009612)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1040000
636	33.2	4.7	1.6	chr13	51541838	51542085	(62822243)	C	MIR	SINE/MIR	(2)	260	5	1041745
311	29.5	10.8	0.0	chr13	51906385	51906533	(62457795)	+	MIRc	SINE/MIR	99	265	(3)	1042290
19497	15.6	2.0	1.1	chr13	71284518	71287770	(43076558)	C	L1M1	LINE/L1	(4273)	3292	7	1067256
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
235	30.8	1.1	0.0	chr13	74324657	74324747	(40039581)	C	MIR	SINE/MIR	(0)	262	171	1071818
13	15.0	3.3	0.0	chr13	74324865	74324894	(40039434)	+	(ATA)n	Simple_repeat	1	31	(0)	1071819
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
1340	15.7	1.3	2.1	chr13	79393292	79393526	(34970802)	+	MER50	LTR/ERV1	479	711	(23)	1078857
477	28.0	3.4	2.8	chr13	80362163	80362343	(34001985)	+	MIR1_Amn	SINE/MIR	11	188	(80)	1080240
19	3.8	0.0	0.0	chr13	87123961	87123987	(27240341)	+	(AAAC)n	Simple_repeat	1	27	(0)	1088600
683	32.5	8.7	2.3	chr13	87124037	87124421	(27239907)	C	MamRTE1	LINE/RTE-BovB	(100)	3712	3301	1088601
57	0.0	0.0	0.0	chr13	93726104	93726152	(20638176)	+	(AC)n	Simple_repeat	1	49	(0)	1097272
254	32.7	16.5	1.9	chr13	94087497	94087708	(20276620)	C	MIR	SINE/MIR	(0)	262	14	1097782
661	1.4	0.0	0.0	chr13	94549650	94549722	(19814606)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1098498
881	35.5	10.2	3.1	chr13	96543873	96544557	(17819771)	+	L3	LINE/CR1	3255	3993	(106)	1101765
26	28.2	1.2	0.0	chr13	97976248	97976327	(16388001)	+	(CCCCGA)n	Simple_repeat	1	81	(0)	1103821
2545	17.9	12.0	5.5	chr13	98509340	98509542	(15854786)	+	L1MB8	LINE/L1	5399	5619	(559)	1104740
3166	16.6	6.7	14.1	chr13	98509543	98510400	(15853928)	+	MER54B	LTR/ERVL	4	793	(0)	1104741
256	31.9	2.1	6.0	chr13	99911834	99911933	(14452395)	+	MER131	DNA?	34	129	(86)	1107022
12	23.4	4.6	4.4	chr13	100089149	100089213	(14275115)	+	(CGCTGG)n	Simple_repeat	1	68	(0)	1107378
432	24.5	18.4	0.5	chr13	100100053	100100253	(14264075)	C	MIRc	SINE/MIR	(13)	255	11	1107403
609	29.5	19.8	1.1	chr13	100442586	100443162	(13921166)	C	L2a	LINE/L2	(26)	3400	2684	1107972
16	21.7	4.8	3.0	chr13	105972205	105972267	(8392061)	+	A-rich	Low_complexity	1	66	(0)	1115439
23	18.2	4.0	3.9	chr13	109787005	109787078	(4577250)	+	G-rich	Low_complexity	1	77	(0)	1120508
23	13.4	0.0	5.5	chr13	109787179	109787233	(4577095)	+	(CCCCGT)n	Simple_repeat	1	55	(0)	1120509
12	21.4	3.9	3.7	chr13	112057387	112057438	(2306890)	+	(CCGCCC)n	Simple_repeat	1	54	(0)	1123117
2325	10.7	6.6	0.8	chr13	113157676	113158034	(1206294)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1124259
556	25.8	5.6	0.0	chr13	113158054	113158204	(1206124)	+	MER58A	DNA/hAT-Charlie	8	167	(57)	1124260
28	25.2	2.2	2.1	chr13	113158216	113158306	(1206022)	+	(CTCC)n	Simple_repeat	1	93	(0)	1124261
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
22726	6.3	1.1	1.4	chr13	113383173	113384521	(979807)	C	L1PB1	LINE/L1	(962)	5900	4554	1124619
498	15.9	15.9	1.5	chr13	113453843	113453976	(910352)	C	L1MB5	LINE/L1	(182)	5992	5836	1124709
2013	8.5	9.1	0.7	chr14	20412676	20412958	(86630760)	C	AluSx1	SINE/Alu	(3)	309	1	1128008
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
722	0.0	0.0	0.0	chr14	20610132	20610213	(86433505)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1128337
657	1.4	0.0	0.0	chr14	20613399	20613472	(86430246)	C	tRNA-Pro-CCY	tRNA	(1)	74	1	1128342
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
740	0.0	0.0	0.0	chr14	20625370	20625451	(86418267)	+	tRNA-Leu-CTA_	tRNA	1	82	(3)	1128366
544	0.0	0.0	22.3	chr14	20653099	20653192	(86390526)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128415
535	1.4	0.0	22.3	chr14	20657464	20657557	(86386161)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128419
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
638	2.7	0.0	0.0	chr14	20681690	20681762	(86361956)	+	tRNA-Thr-ACA	tRNA	1	73	(3)	1128457
2159	10.0	2.4	4.9	chr14	20682388	20682735	(86360983)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1128458
512	22.1	9.5	1.4	chr14	21528645	21528785	(85514933)	C	MIRc	SINE/MIR	(84)	146	1	1129930
444	24.2	9.1	1.6	chr14	21694582	21694703	(85349015)	+	MLT1K	LTR/ERVL-MaLR	461	592	(3)	1130259
408	30.3	8.4	0.0	chr14	21694706	21694847	(85348871)	+	L3	LINE/CR1	1729	1883	(2216)	1130258
1610	23.4	8.3	6.2	chr14	22333875	22334387	(84709331)	C	LTR106_Mam	LTR	(184)	524	1	1131049
185	25.0	0.0	0.0	chr14	22589858	22589901	(84453817)	C	MIR	SINE/MIR	(8)	254	211	1131370
663	1.4	0.0	0.0	chr14	22929701	22929773	(84113945)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	1131978
576	25.5	1.3	6.3	chr14	22957344	22957410	(84086308)	C	MIRb	SINE/MIR	(9)	259	197	1132035
294	26.4	7.8	3.6	chr14	23469077	23469186	(83574532)	C	MIR3	SINE/MIR	(49)	159	45	1132899
516	30.8	6.6	0.6	chr14	24966421	24966590	(82077128)	+	MIRb	SINE/MIR	37	217	(51)	1134878
384	28.9	17.0	2.4	chr14	24979116	24979402	(82064316)	+	MamRep605	LTR?	388	718	(131)	1134895
872	21.7	2.9	7.8	chr14	29805529	29805783	(77237935)	C	MIR	SINE/MIR	(0)	262	21	1140999
1018	17.8	11.1	1.9	chr14	31298083	31298294	(75745424)	+	MLT1F	LTR/ERVL-MaLR	300	533	(15)	1143349
3927	13.3	2.5	5.3	chr14	31933734	31934420	(75109298)	C	L1MA9	LINE/L1	(522)	5790	5107	1144398
334	26.4	12.4	1.3	chr14	32308176	32308325	(74735393)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	427	1144956
439	24.5	7.4	3.0	chr14	32308418	32308585	(74735133)	C	MLT1K	LTR/ERVL-MaLR	(349)	246	71	1144956
185	37.5	9.2	0.0	chr14	32370174	32370301	(74673417)	+	MamSINE1	SINE/tRNA-RTE	142	282	(8)	1145062
365	31.4	9.1	1.2	chr14	35821850	35822010	(71221708)	C	MIR3	SINE/MIR	(16)	192	18	1150687
13	0.0	0.0	0.0	chr14	36446982	36446998	(70596720)	+	(AAC)n	Simple_repeat	1	17	(0)	1151619
308	37.7	2.3	2.3	chr14	36986445	36986577	(70057141)	C	L1MEd	LINE/L1	(6394)	692	560	1152307
2827	1.0	0.0	0.0	chr14	49586580	49586879	(57456839)	+	7SLRNA	srpRNA	1	300	(20)	1168209
2332	7.0	0.7	0.0	chr14	49687713	49687997	(57355721)	C	AluSc	SINE/Alu	(22)	287	1	1168415
13	29.7	1.5	3.0	chr14	49688218	49688282	(57355436)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1168416
1279	22.4	12.6	2.0	chr14	49880974	49881278	(57162440)	C	MER21C	LTR/ERVL	(398)	540	199	1168827
273	26.7	1.1	10.0	chr14	50321259	50321358	(56722360)	C	MIR3	SINE/MIR	(25)	183	93	1169766
337	31.0	4.9	0.0	chr14	51581307	51581422	(55462296)	C	L2c	LINE/L2	(0)	3387	3266	1171685
248	29.8	7.6	7.6	chr14	52399296	52399466	(54644252)	+	MIR3	SINE/MIR	1	171	(37)	1172882
445	24.3	10.3	1.3	chr14	52399467	52399616	(54644102)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	1172883
1165	15.1	3.2	2.8	chr14	54503574	54503791	(52539927)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1176023
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
1157	10.6	4.1	0.0	chr14	59275259	59275446	(47768272)	+	L1PA13	LINE/L1	5967	6162	(1)	1183518
461	30.3	6.3	3.3	chr14	59543967	59544150	(47499568)	+	MIRb	SINE/MIR	41	230	(38)	1183860
1475	11.8	0.0	0.5	chr14	59544162	59544365	(47499353)	C	AluSq2	SINE/Alu	(8)	305	103	1183861
180	17.9	0.0	0.0	chr14	60250954	60250981	(46792737)	C	MIR3	SINE/MIR	(60)	148	121	1184792
2529	23.2	3.0	5.4	chr14	60311053	60311867	(46731851)	C	L1MC4	LINE/L1	(28)	8014	7220	1184871
20	24.3	2.6	2.6	chr14	60649205	60649280	(46394438)	+	G-rich	Low_complexity	1	78	(0)	1185329
12	14.6	0.0	5.9	chr14	60653182	60653215	(46390503)	+	(CCTG)n	Simple_repeat	1	34	(0)	1185331
16	22.3	0.0	2.3	chr14	61321681	61321724	(45721994)	+	GA-rich	Low_complexity	1	44	(0)	1186349
2141	14.7	8.3	3.4	chr14	63677942	63678159	(43365559)	C	LTR47A2	LTR/ERVL	(197)	235	1	1189782
1223	31.1	10.4	1.8	chr14	63895913	63896567	(43147151)	C	L4_A_Mam	LINE/RTE-X	(0)	4990	4273	1190320
1133	12.0	17.9	7.1	chr14	67675227	67675493	(39368225)	+	AluJo	SINE/Alu	1	302	(10)	1196534
256	31.3	7.7	0.8	chr14	68137818	68137949	(38905769)	+	Eulor6D	DNA?	122	263	(39)	1197280
191	27.9	2.5	11.2	chr14	68214428	68214516	(38829202)	+	L3	LINE/CR1	4008	4088	(11)	1197380
12	3.8	6.5	6.1	chr14	68793489	68793519	(38250199)	+	(GTT)n	Simple_repeat	1	33	(0)	1198273
13	17.4	0.0	2.9	chr14	69880165	69880198	(37163520)	+	G-rich	Low_complexity	1	34	(0)	1200350
8247	7.9	15.5	14.6	chr14	70254544	70254943	(36788775)	+	LTR12C	LTR/ERV1	4	445	(1134)	1200924
91	0.0	0.0	0.0	chr14	70254944	70255023	(36788695)	+	(GCCGCCC)n	Simple_repeat	1	80	(0)	1200925
204	18.2	0.0	4.3	chr14	72905307	72905352	(34138366)	+	L2c	LINE/L2	3342	3385	(2)	1205052
367	33.5	5.6	4.7	chr14	73772422	73772634	(33271084)	C	L1ME4a	LINE/L1	(217)	5907	5693	1207034
15	21.6	2.3	0.0	chr14	74955452	74955494	(32088224)	+	G-rich	Low_complexity	1	44	(0)	1209463
346	30.2	13.7	5.6	chr14	75536002	75536376	(31507342)	C	L2a	LINE/L2	(0)	3426	3017	1210647
59	0.0	0.0	0.0	chr14	75869014	75869063	(31174655)	+	(GT)n	Simple_repeat	1	50	(0)	1211217
12	22.4	0.0	2.6	chr14	75869110	75869147	(31174571)	+	(TTGT)n	Simple_repeat	1	38	(0)	1211218
11	18.9	5.8	6.8	chr14	76962137	76962144	(30081574)	+	(CTCACT)n	Simple_repeat	1	70	(0)	1213304
15	17.0	5.2	4.9	chr14	76962145	76962202	(30081516)	+	(TCACTT)n	Simple_repeat	1	61	(0)	1213305
621	31.9	8.4	3.4	chr14	76962286	76962610	(30081108)	C	L2c	LINE/L2	(0)	3387	3045	1213306
19	7.8	4.5	4.3	chr14	77040280	77040323	(30003395)	+	GA-rich	Low_complexity	1	46	(0)	1213492
16	19.2	0.0	0.0	chr14	89576538	89576567	(17467151)	+	A-rich	Low_complexity	1	30	(0)	1232330
230	27.3	0.0	0.0	chr14	89576659	89576713	(17467005)	+	UCON15	Unknown	89	143	(204)	1232331
16	21.6	4.2	0.0	chr14	89576748	89576795	(17466923)	+	(CCTC)n	Simple_repeat	1	50	(0)	1232332
587	35.8	9.8	1.1	chr14	89835060	89835251	(17208467)	C	L2	LINE/L2	(1890)	1529	1309	1232819
2109	12.1	7.3	0.6	chr14	89835252	89835585	(17208133)	C	Tigger4b	DNA/TcMar-Tigger	(0)	361	4	1232820
236	24.8	0.0	17.2	chr14	90373894	90374044	(16669674)	C	L2a	LINE/L2	(0)	3426	3302	1233790
1416	16.4	2.7	0.0	chr14	90375957	90376175	(16667543)	+	Tigger3c	DNA/TcMar-Tigger	378	602	(0)	1233795
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
405	32.4	12.3	4.1	chr14	91154702	91155282	(15888436)	+	L2c	LINE/L2	2730	3354	(33)	1235179
247	31.2	0.0	3.1	chr14	91155295	91155390	(15888328)	C	MIR	SINE/MIR	(10)	252	160	1235184
700	14.2	1.6	0.0	chr14	91155392	91155511	(15888207)	+	MER21B	LTR/ERVL	1	122	(746)	1235185
455	24.9	5.1	7.7	chr14	91284705	91284926	(15758792)	+	MER113	DNA/hAT-Charlie	305	520	(1)	1235463
343	26.7	10.4	1.0	chr14	91380456	91380671	(15663047)	C	L1MC5a	LINE/L1	(158)	2619	2521	1235597
1226	9.3	0.0	0.0	chr14	91493107	91493257	(15550461)	+	AluSz	SINE/Alu	1	151	(161)	1235785
856	18.9	2.9	11.0	chr14	91493285	91493511	(15550207)	+	AluJo	SINE/Alu	85	292	(20)	1235786
578	13.5	0.0	0.0	chr14	91493512	91493585	(15550133)	+	AluJr	SINE/Alu	1	74	(238)	1235787
521	31.7	5.8	0.6	chr14	92348146	92348326	(14695392)	+	MIRb	SINE/MIR	77	267	(1)	1237393
648	17.8	0.0	0.0	chr14	92348343	92348449	(14695269)	C	MER58B	DNA/hAT-Charlie	(0)	341	235	1237394
315	30.8	7.3	0.2	chr14	92511433	92511582	(14532136)	C	MIRb	SINE/MIR	(29)	179	27	1237681
2883	16.2	4.7	8.7	chr14	92511825	92512488	(14531230)	C	L1MB7	LINE/L1	(5)	6179	5544	1237682
396	36.7	7.0	1.6	chr14	93049473	93049838	(13993880)	C	L2	LINE/L2	(458)	2961	2575	1238709
463	26.8	6.3	6.2	chr14	93065404	93065656	(13978062)	C	MIR	SINE/MIR	(0)	262	9	1238734
239	32.0	4.4	8.0	chr14	93065670	93065907	(13977811)	+	L1M5	LINE/L1	5636	5864	(260)	1238735
327	29.9	13.4	3.6	chr14	93139180	93139324	(13904394)	C	L2a	LINE/L2	(76)	3350	3203	1238891
1458	25.5	11.3	6.9	chr14	93139325	93139589	(13904129)	+	MER20B	DNA/hAT-Charlie	4	263	(520)	1238897
329	25.0	5.6	0.0	chr14	93860263	93860346	(13183372)	C	MIRb	SINE/MIR	(61)	207	119	1240154
13	16.9	3.0	0.0	chr14	94081174	94081206	(12962512)	+	(GCAGCT)n	Simple_repeat	1	34	(0)	1240581
3613	10.3	1.3	0.0	chr14	94953196	94953718	(12090000)	C	L1PA14	LINE/L1	(0)	6161	5632	1242184
1889	18.7	9.6	3.2	chr14	94953719	94953871	(12089847)	C	MLT1C	LTR/ERVL-MaLR	(292)	175	1	1242183
1995	17.2	2.0	0.0	chr14	95226114	95226450	(11817268)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	1242623
369	33.2	5.0	2.8	chr14	95226451	95226521	(11817197)	+	Charlie15a	DNA/hAT-Charlie	152	222	(2)	1242622
1981	16.8	0.3	1.0	chr14	95226570	95226878	(11816840)	C	AluJr	SINE/Alu	(5)	307	1	1242624
525	28.3	2.4	5.5	chr14	95442798	95443014	(11600704)	+	L2a	LINE/L2	3215	3424	(2)	1243034
1803	17.7	1.7	5.1	chr14	95560618	95560924	(11482794)	C	MLT1A0	LTR/ERVL-MaLR	(68)	297	1	1243245
210	17.6	7.5	0.0	chr14	99253539	99253617	(7790101)	C	MIRb	SINE/MIR	(125)	143	51	1249731
26	21.6	0.0	0.0	chr14	99272350	99272403	(7771315)	+	(CA)n	Simple_repeat	1	54	(0)	1249759
14	21.0	2.6	0.0	chr14	99480896	99480934	(7562784)	+	(CCCGCC)n	Simple_repeat	1	40	(0)	1250094
432	30.6	11.8	7.2	chr14	99821936	99822280	(7221438)	+	MamRTE1	LINE/RTE-BovB	3450	3812	(0)	1250693
292	31.9	4.2	0.0	chr14	99946120	99946232	(7097486)	C	L1MC5a	LINE/L1	(169)	2608	2491	1250876
1965	12.7	0.3	8.1	chr14	100023197	100023371	(7020347)	C	AluSx1	SINE/Alu	(6)	306	137	1251030
209	17.9	9.5	8.2	chr14	100356122	100356194	(6687524)	C	MIR1_Amn	SINE/MIR	(43)	187	114	1251721
1980	13.7	2.0	0.7	chr14	100887473	100887764	(6155954)	+	AluSz	SINE/Alu	2	297	(15)	1252522
1493	27.4	10.3	6.3	chr14	101792362	101792872	(5250846)	C	L1MC5a	LINE/L1	(784)	1993	1465	1253655
27	0.0	0.0	0.0	chr14	101809553	101809578	(5234140)	+	(T)n	Simple_repeat	1	26	(0)	1253682
256	27.4	4.5	0.0	chr14	102087766	102087849	(4955869)	C	CR1_Mam	LINE/CR1	(52)	2152	2065	1254196
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
16	0.0	0.0	0.0	chr14	102317173	102317189	(4726529)	+	(T)n	Simple_repeat	1	17	(0)	1254659
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
247	24.2	9.8	4.8	chr14	102525126	102525251	(4518467)	C	MER113B	DNA/hAT-Charlie	(116)	186	54	1255088
11	25.5	0.0	6.9	chr14	102592248	102592305	(4451413)	+	G-rich	Low_complexity	1	58	(0)	1255258
14	13.0	9.5	0.0	chr14	102592422	102592463	(4451255)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1255259
240	25.6	9.3	0.0	chr14	103022062	103022178	(4021540)	C	L2	LINE/L2	(1118)	2301	2173	1256045
481	24.5	8.9	2.4	chr14	103022203	103022369	(4021349)	C	L2	LINE/L2	(1368)	2051	1873	1256045
972	13.6	3.9	0.0	chr14	103022373	103022519	(4021199)	C	AluJb	SINE/Alu	(22)	290	138	1256049
181	34.7	5.1	2.3	chr14	103233045	103233215	(3810503)	C	MIRb	SINE/MIR	(19)	249	74	1256406
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
23	27.9	0.0	2.5	chr14	103715302	103715382	(3328336)	+	(CCCGCC)n	Simple_repeat	1	81	(0)	1257364
12	18.1	2.4	4.8	chr14	103715441	103715481	(3328237)	+	(CTC)n	Simple_repeat	1	42	(0)	1257365
68	18.8	0.0	0.0	chr14	104150111	104150240	(2893478)	+	(CCTCCT)n	Simple_repeat	1	130	(0)	1258144
1479	22.3	11.5	0.9	chr14	104341595	104341920	(2701798)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1258325
30	3.1	0.0	0.0	chr14	104342231	104342263	(2701455)	+	(GGGGC)n	Simple_repeat	1	33	(0)	1258326
625	26.7	12.4	7.4	chr14	104924293	104924672	(2119046)	+	MLT1J	LTR/ERVL-MaLR	105	506	(6)	1259010
31	15.8	0.0	7.8	chr14	105021289	105021378	(2022340)	+	(GCCCC)n	Simple_repeat	1	90	(0)	1259101
11	24.8	0.0	0.0	chr14	105474566	105474599	(1569119)	+	G-rich	Low_complexity	1	34	(0)	1259730
258	29.2	6.2	0.9	chr15	28955139	28955245	(73035944)	C	MER112	DNA/hAT-Charlie	(35)	226	114	1274786
314	33.3	2.4	1.6	chr15	28955337	28955461	(73035728)	C	MIR3	SINE/MIR	(62)	146	21	1274787
943	34.4	12.5	1.9	chr15	33278796	33279531	(68711658)	+	LTR81	LTR/Gypsy	146	1188	(205)	1281134
287	31.0	3.5	1.2	chr15	34799013	34799097	(67192092)	C	MIR	SINE/MIR	(164)	98	12	1283414
227	35.8	1.0	1.0	chr15	34799132	34799227	(67191962)	+	MER5A	DNA/hAT-Charlie	7	102	(87)	1283415
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
15	19.7	4.2	2.0	chr15	38453931	38453978	(63537211)	+	(TTA)n	Simple_repeat	1	50	(0)	1288351
596	23.2	10.8	7.6	chr15	39781991	39782319	(62208870)	C	L1ME4b	LINE/L1	(2357)	420	72	1290163
12	9.7	0.0	0.0	chr15	39920192	39920213	(62070976)	+	(GGGA)n	Simple_repeat	1	22	(0)	1290387
1087	8.9	21.4	0.0	chr15	39934969	39935148	(62056041)	C	MER30	DNA/hAT-Charlie	(1)	229	1	1290417
436	27.5	6.1	2.1	chr15	39938107	39938247	(62052942)	+	L2b	LINE/L2	3212	3358	(17)	1290427
611	29.8	10.4	2.2	chr15	39938306	39938621	(62052568)	+	L4_B_Mam	LINE/RTE-X	4416	4760	(181)	1290428
33	7.5	0.0	0.0	chr15	40092435	40092476	(61898713)	+	(AC)n	Simple_repeat	1	42	(0)	1290671
12	22.6	2.3	2.3	chr15	40092604	40092646	(61898543)	+	A-rich	Low_complexity	1	44	(0)	1290672
232	33.0	7.3	7.0	chr15	40430192	40430435	(61560754)	C	L2b	LINE/L2	(3)	3372	3128	1291182
189	36.2	3.9	4.7	chr15	40430452	40430686	(61560503)	C	L2b	LINE/L2	(531)	2888	2656	1291182
2361	10.9	0.0	0.0	chr15	40727856	40728159	(61263030)	C	AluSx1	SINE/Alu	(8)	304	1	1291824
337	33.9	5.2	5.5	chr15	40756815	40756974	(61234215)	+	L2c	LINE/L2	3228	3386	(1)	1291862
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
14	13.1	0.0	0.0	chr15	41231305	41231330	(60759859)	+	(CCCT)n	Simple_repeat	1	26	(0)	1292845
1867	11.2	8.8	0.0	chr15	41490678	41490945	(60500244)	C	AluSx1	SINE/Alu	(18)	294	1	1293488
224	28.4	0.0	10.8	chr15	41493063	41493145	(60498044)	C	MIR3	SINE/MIR	(54)	154	81	1293494
487	32.7	3.8	8.7	chr15	41788298	41788629	(60202560)	C	L2c	LINE/L2	(4)	3383	3069	1294102
322	26.1	21.0	4.2	chr15	42208490	42208705	(59782484)	+	MIRb	SINE/MIR	7	268	(0)	1294730
815	18.1	5.3	4.3	chr15	42208766	42208950	(59782239)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	1294731
12	23.1	5.1	3.2	chr15	42491090	42491148	(59500041)	+	(CCGCCG)n	Simple_repeat	1	62	(0)	1295211
422	29.3	5.0	11.0	chr15	42495112	42495456	(59495733)	+	L2b	LINE/L2	3048	3370	(5)	1295221
2263	8.4	1.0	1.3	chr15	42499073	42499371	(59491818)	C	AluSp	SINE/Alu	(15)	298	1	1295228
439	20.3	14.1	1.0	chr15	42499481	42499689	(59491500)	C	MER113A	DNA/hAT-Charlie	(27)	287	47	1295229
1282	13.0	7.5	1.5	chr15	42619368	42619567	(59371622)	+	AluJr	SINE/Alu	86	298	(14)	1295486
1195	15.8	1.0	8.2	chr15	42619568	42619787	(59371402)	C	MER1A	DNA/hAT-Charlie	(274)	255	52	1295487
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
12	23.9	0.0	2.4	chr15	49169877	49169917	(52821272)	+	A-rich	Low_complexity	1	41	(0)	1305904
12	14.4	7.5	2.3	chr15	50816221	50816260	(51174929)	+	A-rich	Low_complexity	1	43	(0)	1308596
5188	18.8	12.2	8.7	chr15	50907542	50907841	(51083348)	C	Charlie1	DNA/hAT-Charlie	(2465)	316	2	1308754
17	26.7	0.0	0.0	chr15	50908730	50908778	(51082411)	+	(GGC)n	Simple_repeat	1	49	(0)	1308765
485	22.6	12.6	1.9	chr15	51184708	51184869	(50806320)	C	MIRb	SINE/MIR	(2)	266	85	1309189
292	29.2	14.0	3.8	chr15	52257594	52257803	(49733386)	C	MIR	SINE/MIR	(15)	247	13	1310997
484	29.3	3.5	1.2	chr15	55823488	55823656	(46167533)	+	MER124	DNA?	9	181	(216)	1316269
334	27.5	19.8	0.0	chr15	55825373	55825510	(46165679)	+	MIRb	SINE/MIR	81	252	(16)	1316272
280	30.0	10.0	2.7	chr15	56195616	56195776	(45795413)	C	MER20	DNA/hAT-Charlie	(4)	215	45	1316828
304	29.2	4.8	6.8	chr15	56737064	56737254	(45253935)	+	MLT1K	LTR/ERVL-MaLR	356	542	(53)	1317512
255	14.8	0.0	0.0	chr15	56737264	56737311	(45253878)	+	MER34A	LTR/ERV1	25	108	(477)	1317513
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
883	18.4	5.6	0.0	chr15	57377319	57377486	(44613703)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	1318606
343	24.2	13.7	0.0	chr15	57866403	57866534	(44124655)	C	MER5C	DNA/hAT-Charlie	(3)	310	158	1319320
710	23.0	0.8	9.5	chr15	57866537	57866800	(44124389)	C	L1ME2z	LINE/L1	(8)	6436	6196	1319321
13	15.7	0.0	7.3	chr15	58038731	58038771	(43952418)	+	(TGGTAA)n	Simple_repeat	1	41	(0)	1319529
28	13.3	0.0	6.2	chr15	58987700	58987764	(43003425)	+	(GGC)n	Simple_repeat	1	65	(0)	1321239
33	3.1	0.0	0.0	chr15	59300297	59300329	(42690860)	+	(CA)n	Simple_repeat	1	33	(0)	1321789
1199	14.6	5.0	0.0	chr15	59529185	59529376	(42461813)	+	LTR8	LTR/ERV1	1	202	(489)	1322241
290	29.7	2.8	8.6	chr15	60396904	60397054	(41594135)	C	MIRc	SINE/MIR	(1)	267	126	1323704
407	30.3	6.3	8.3	chr15	61065075	61065315	(40925874)	+	L2c	LINE/L2	3107	3342	(45)	1324742
17	16.3	6.2	0.0	chr15	63504421	63504468	(38486721)	+	G-rich	Low_complexity	1	51	(0)	1328722
187	26.5	2.0	0.0	chr15	64151485	64151533	(37839656)	+	L2b	LINE/L2	3324	3373	(2)	1329860
17	4.3	0.0	0.0	chr15	64990092	64990115	(37001074)	+	(AGG)n	Simple_repeat	1	24	(0)	1331656
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
643	27.4	5.3	0.0	chr15	65364210	65364388	(36626801)	+	MIRb	SINE/MIR	38	226	(42)	1332462
422	23.8	13.3	0.8	chr15	65413784	65413956	(36577233)	+	MIR3	SINE/MIR	6	199	(9)	1332565
301	30.8	4.5	0.0	chr15	65767182	65767288	(36223901)	C	MIR3	SINE/MIR	(2)	206	95	1333289
756	18.9	11.2	0.0	chr15	65767288	65767446	(36223743)	+	L2a	LINE/L2	3246	3424	(2)	1333290
817	18.2	2.0	2.0	chr15	65767450	65767597	(36223592)	C	AluJo	SINE/Alu	(19)	293	146	1333291
638	4.0	0.0	0.0	chr15	65869059	65869133	(36122056)	C	tRNA-Gln-CAG	tRNA	(0)	75	1	1333537
452	30.2	9.0	1.2	chr15	66368888	66369051	(35622138)	+	MIR3	SINE/MIR	21	198	(10)	1334549
240	36.8	4.1	0.0	chr15	66700612	66700728	(35290461)	C	MIRc	SINE/MIR	(55)	213	92	1335294
17	20.9	0.0	5.5	chr15	66702311	66702366	(35288823)	+	(GAGC)n	Simple_repeat	1	52	(0)	1335298
195	25.3	7.2	6.2	chr15	66744807	66744903	(35246286)	+	MIRc	SINE/MIR	38	135	(133)	1335379
307	33.0	1.0	4.8	chr15	67072949	67073053	(34918136)	C	L2b	LINE/L2	(33)	3342	3242	1336022
269	23.4	2.9	3.0	chr15	67107067	67107155	(34884034)	+	L2a	LINE/L2	3290	3425	(1)	1336086
12	11.2	3.2	3.1	chr15	67543183	67543213	(34447976)	+	(CCCCTC)n	Simple_repeat	1	32	(0)	1336781
441	26.9	0.9	0.9	chr15	67680642	67680746	(34310443)	+	Penelope1_Vert	LINE/Penelope	438	542	(545)	1336987
409	27.1	9.6	1.2	chr15	67750507	67750678	(34240511)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	1337095
249	35.0	4.2	1.4	chr15	67775673	67775811	(34215378)	C	L2b	LINE/L2	(203)	3172	3030	1337119
1010	0.0	0.0	0.0	chr15	67839939	67840045	(34151144)	C	U6	snRNA	(0)	107	1	1337203
474	27.3	2.0	6.0	chr15	67884427	67884641	(34106548)	C	MIR	SINE/MIR	(51)	211	4	1337305
13	20.6	2.4	2.4	chr15	68015009	68015049	(33976140)	+	(TTCT)n	Simple_repeat	1	42	(0)	1337581
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
13	19.4	0.0	2.7	chr15	68818818	68818854	(33172335)	+	(CCCCCA)n	Simple_repeat	1	37	(0)	1339118
624	26.0	0.7	0.7	chr15	68829068	68829218	(33161971)	+	MLT1J2	LTR/ERVL-MaLR	15	165	(283)	1339132
3327	13.9	4.1	11.8	chr15	68991613	68992346	(32998843)	C	LTR76	LTR/ERV1	(0)	675	1	1339417
303	26.0	0.0	6.3	chr15	69143826	69143936	(32847253)	C	MIRb	SINE/MIR	(0)	268	165	1339719
212	26.0	17.4	6.1	chr15	69265349	69265479	(32725710)	+	MIR	SINE/MIR	38	186	(76)	1339898
13	15.2	2.5	4.9	chr15	70013872	70013911	(31977278)	+	G-rich	Low_complexity	1	41	(0)	1341328
12	21.7	0.0	0.0	chr15	70062369	70062400	(31928789)	+	(GCGG)n	Simple_repeat	1	32	(0)	1341412
624	27.4	7.4	7.4	chr15	70111202	70111243	(31879946)	+	LTR16A	LTR/ERVL	409	451	(0)	1341484
1319	26.8	8.0	1.1	chr15	70180792	70181244	(31809945)	C	LTR16C	LTR/ERVL	(2)	487	1	1341646
617	19.6	4.8	1.9	chr15	70181268	70181428	(31809761)	C	MER5A	DNA/hAT-Charlie	(23)	166	1	1341647
61	0.0	0.0	0.0	chr15	70181436	70181487	(31809702)	+	(CA)n	Simple_repeat	1	52	(0)	1341648
12	26.9	1.6	4.7	chr15	70181609	70181671	(31809518)	+	(CTGCTCT)n	Simple_repeat	1	64	(0)	1341649
499	27.5	7.6	2.1	chr15	70494269	70494454	(31496735)	C	MIR	SINE/MIR	(10)	252	56	1342255
2819	20.1	7.7	4.7	chr15	70506414	70507117	(31484072)	+	LTR8A	LTR/ERV1	1	727	(0)	1342275
244	19.4	19.8	0.0	chr15	70874840	70874932	(31116257)	C	L2a	LINE/L2	(2)	3424	3309	1342910
326	26.7	3.2	0.0	chr15	70875102	70875191	(31115998)	+	MIR3	SINE/MIR	108	200	(8)	1342911
398	25.0	10.3	0.0	chr15	71079221	71079316	(30911873)	+	MIR3	SINE/MIR	98	204	(4)	1343179
18	8.5	0.0	0.0	chr15	71079352	71079376	(30911813)	+	(A)n	Simple_repeat	1	25	(0)	1343180
315	28.0	4.0	0.0	chr15	71295516	71295628	(30695561)	+	MIR3	SINE/MIR	40	155	(113)	1343504
238	20.4	0.0	8.5	chr15	71295632	71295690	(30695499)	C	MER5B	DNA/hAT-Charlie	(0)	178	125	1343505
2557	20.8	5.7	1.4	chr15	71295719	71296288	(30694901)	C	L1MB8	LINE/L1	(60)	6118	5523	1343506
236	29.9	13.2	2.0	chr15	71364185	71364385	(30626804)	+	MIRb	SINE/MIR	4	230	(38)	1343622
254	18.8	17.5	1.2	chr15	71364445	71364525	(30626664)	+	MIR	SINE/MIR	76	172	(90)	1343623
206	33.5	6.6	3.7	chr15	72114611	72114771	(29876418)	C	L2c	LINE/L2	(921)	2498	2333	1344925
812	1.1	0.0	0.0	chr15	72228377	72228464	(29762725)	C	AluYc	SINE/Alu	(11)	288	201	1345104
382	21.9	15.0	0.0	chr15	72473556	72473674	(29517515)	+	MIRb	SINE/MIR	87	226	(42)	1345545
407	31.7	5.3	0.0	chr15	72834517	72834677	(29156512)	+	MIRb	SINE/MIR	7	176	(92)	1346169
448	20.4	0.0	0.0	chr15	72834765	72834862	(29156327)	+	L1MA10	LINE/L1	6233	6330	(4)	1346170
238	29.0	1.1	2.1	chr15	72916930	72917024	(29074165)	+	MER5A1	DNA/hAT-Charlie	17	110	(56)	1346318
739	23.5	2.1	2.1	chr15	72917167	72917458	(29073731)	+	L1ME4b	LINE/L1	5602	5818	(306)	1346319
13	19.7	4.0	3.9	chr15	73633748	73633797	(28357392)	+	(CCTCCTT)n	Simple_repeat	1	52	(0)	1347428
2588	5.0	0.0	0.3	chr15	73755220	73755521	(28235668)	C	AluY	SINE/Alu	(10)	301	1	1347663
1034	10.2	1.9	7.1	chr15	73755522	73755654	(28235535)	C	L1MB3	LINE/L1	(31)	6152	6017	1347662
319	26.3	0.0	2.6	chr15	73755659	73755736	(28235453)	C	MIRb	SINE/MIR	(2)	266	191	1347664
677	16.9	1.2	2.4	chr15	73755737	73755879	(28235310)	C	L1MB3	LINE/L1	(160)	6023	5887	1347665
15	14.4	5.0	2.4	chr15	73927563	73927602	(28063587)	+	(GCC)n	Simple_repeat	1	42	(0)	1347952
204	30.0	6.8	0.0	chr15	74228477	74228586	(27762603)	C	L2c	LINE/L2	(327)	3060	2943	1348486
525	29.1	4.4	7.8	chr15	74375518	74375589	(27615600)	C	MIR	SINE/MIR	(13)	249	190	1348728
2124	10.8	2.1	0.0	chr15	74375590	74375875	(27615314)	+	AluSq	SINE/Alu	1	292	(21)	1348729
256	33.9	6.1	3.1	chr15	74382295	74382422	(27608767)	C	MIR3	SINE/MIR	(17)	191	60	1348746
273	28.2	6.6	0.0	chr15	74540674	74540758	(27450431)	C	L2	LINE/L2	(2906)	513	423	1349045
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
20	18.4	2.0	1.9	chr15	74615919	74615969	(27375220)	+	(GCG)n	Simple_repeat	1	52	(0)	1349184
442	25.2	11.0	6.6	chr15	74661907	74662148	(27329041)	C	L1ME4a	LINE/L1	(155)	5969	5716	1349241
228	31.9	3.7	8.7	chr15	74662237	74662408	(27328781)	+	L2c	LINE/L2	3225	3387	(0)	1349242
16	0.0	0.0	0.0	chr15	74662419	74662436	(27328753)	+	(AT)n	Simple_repeat	1	18	(0)	1349243
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
746	26.6	4.2	11.2	chr15	75590366	75590721	(26400468)	+	L2c	LINE/L2	3058	3387	(0)	1351157
237	20.4	2.0	0.0	chr15	75842327	75842375	(26148814)	C	L2b	LINE/L2	(18)	3357	3308	1351617
309	23.0	6.3	1.3	chr15	75842393	75842467	(26148722)	C	L2a	LINE/L2	(3)	3423	3345	1351618
1748	15.2	4.4	0.0	chr15	75903475	75903756	(26087433)	+	AluJb	SINE/Alu	2	296	(16)	1351719
433	33.2	9.4	4.3	chr15	76401177	76401550	(25589639)	+	L2c	LINE/L2	2442	2836	(583)	1352511
13	21.9	2.0	3.9	chr15	77419740	77419790	(24571399)	+	G-rich	Low_complexity	1	52	(0)	1354017
231	20.7	3.3	1.7	chr15	78033866	78033924	(23957265)	C	L1ME3Cz	LINE/L1	(17)	980	921	1355072
1839	16.4	0.3	0.3	chr15	78678648	78678939	(23312250)	C	AluJo	SINE/Alu	(19)	293	2	1356401
311	32.3	4.6	7.2	chr15	78678969	78679148	(23312041)	+	MIR3	SINE/MIR	20	194	(14)	1356402
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
1507	14.8	2.4	5.7	chr15	80094229	80094528	(21896661)	+	MER1B	DNA/hAT-Charlie	26	315	(24)	1358971
6520	13.1	3.9	0.1	chr15	80772743	80773766	(21217423)	+	Tigger2b_Pri	DNA/TcMar-Tigger	5	1068	(0)	1360089
249	22.5	4.8	5.9	chr15	81007516	81007600	(20983589)	C	L2b	LINE/L2	(2)	3373	3290	1360526
531	20.5	4.3	0.9	chr15	81007686	81007798	(20983391)	+	MER5A	DNA/hAT-Charlie	73	189	(0)	1360527
249	24.5	0.0	0.0	chr15	81729431	81729479	(20261710)	C	MIRb	SINE/MIR	(16)	252	204	1361726
702	20.4	0.0	0.0	chr15	82186560	82186696	(19804493)	C	MER63D	DNA/hAT-Blackjack	(897)	164	28	1362507
17	17.6	1.7	6.7	chr15	82709459	82709517	(19281672)	+	G-rich	Low_complexity	1	60	(0)	1363302
311	33.6	11.0	6.0	chr15	82985327	82985741	(19005448)	C	L2	LINE/L2	(623)	2796	2359	1363815
420	35.0	8.7	3.7	chr15	83010833	83011235	(18979954)	C	L2c	LINE/L2	(36)	3351	2927	1363867
341	14.3	0.0	1.8	chr15	83067477	83067533	(18923656)	C	MER5A	DNA/hAT-Charlie	(75)	114	59	1363979
267	24.4	4.7	1.2	chr15	83108229	83108311	(18882878)	+	MIR3	SINE/MIR	7	92	(116)	1364074
361	29.3	2.0	1.0	chr15	84762799	84762898	(17228291)	+	MIR3	SINE/MIR	101	201	(7)	1366616
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
963	26.1	5.9	3.2	chr15	85003838	85004150	(16987039)	C	MLT1J1	LTR/ERVL-MaLR	(122)	322	1	1367099
725	30.1	4.3	2.6	chr15	85397877	85398105	(16593084)	C	MIRb	SINE/MIR	(9)	259	27	1367760
4758	16.7	0.8	2.4	chr15	85408290	85409164	(16582025)	C	L1MB3	LINE/L1	(5)	6178	5316	1367781
22	15.0	0.0	6.8	chr15	85795061	85795119	(16196070)	+	G-rich	Low_complexity	1	59	(0)	1368355
556	26.4	18.6	0.8	chr15	88636414	88636554	(13354635)	C	L2a	LINE/L2	(42)	3384	3188	1372724
1079	22.8	7.5	0.4	chr15	88636555	88636826	(13354363)	C	AluJr	SINE/Alu	(18)	294	2	1372725
483	20.6	11.9	11.4	chr15	89017812	89017986	(12973203)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	1373468
15	10.7	0.0	5.9	chr15	89359170	89359203	(12631986)	+	(CCTC)n	Simple_repeat	1	34	(0)	1374096
224	28.5	19.3	2.8	chr15	89473011	89473259	(12517930)	C	L2b	LINE/L2	(6)	3369	3070	1374265
1913	13.6	0.7	0.0	chr15	89498012	89498319	(12492870)	C	AluJb	SINE/Alu	(0)	312	1	1374320
302	30.1	1.5	5.7	chr15	89498344	89498484	(12492705)	C	L1M5	LINE/L1	(333)	5791	5657	1374321
15	12.2	0.0	0.0	chr15	90155169	90155195	(11835994)	+	(CCA)n	Simple_repeat	1	27	(0)	1375755
475	30.1	7.7	13.2	chr15	90706458	90706897	(11284292)	+	MamGypLTR1d	LTR/Gypsy	279	676	(137)	1376919
248	21.5	1.5	3.0	chr15	92881290	92881356	(9109833)	+	MIR3	SINE/MIR	38	103	(105)	1380694
994	17.6	1.1	1.1	chr15	93069612	93069800	(8921389)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1380953
13	23.5	0.0	0.0	chr15	98548717	98548751	(3442438)	+	G-rich	Low_complexity	1	35	(0)	1388808
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
556	17.8	1.0	0.0	chr15	101127638	101127738	(863451)	C	LTR67B	LTR/ERVL	(3)	617	516	1392364
541	24.7	3.8	0.7	chr15	101127829	101127983	(863206)	C	LTR67B	LTR/ERVL	(276)	344	185	1392364
197	32.7	7.0	0.0	chr16	399992	400098	(89938247)	C	MIRc	SINE/MIR	(134)	134	20	1394692
15	18.9	2.3	2.2	chr16	668148	668191	(89670154)	+	(GGTCCG)n	Simple_repeat	1	45	(0)	1395064
184	29.2	1.5	0.0	chr16	741340	741404	(89596941)	+	L2b	LINE/L2	3294	3359	(16)	1395135
2243	6.6	0.0	2.1	chr16	806876	807164	(89531181)	+	AluY	SINE/Alu	1	283	(28)	1395220
30	0.0	0.0	0.0	chr16	807165	807193	(89531152)	+	(AAAAC)n	Simple_repeat	1	29	(0)	1395221
225	27.0	1.1	10.1	chr16	808027	808125	(89530220)	C	LTR37A	LTR/ERV1	(287)	139	50	1395223
242	27.9	17.2	0.9	chr16	1959282	1959393	(88378952)	+	L2a	LINE/L2	3267	3400	(26)	1396716
274	34.4	8.6	0.8	chr16	1960842	1960970	(88377375)	+	MIRb	SINE/MIR	120	259	(9)	1396719
13	27.1	0.0	2.1	chr16	2205516	2205562	(88132783)	+	G-rich	Low_complexity	1	47	(0)	1397037
235	17.4	9.2	1.4	chr16	2215546	2215615	(88122730)	C	L1ME3	LINE/L1	(3)	6159	6084	1397045
2607	4.8	0.0	0.0	chr16	2215618	2215928	(88122417)	C	AluY	SINE/Alu	(0)	311	1	1397046
185	28.9	12.6	1.2	chr16	2766517	2766600	(87571745)	C	MamRTE1	LINE/RTE-BovB	(2533)	1279	1185	1397887
2412	7.1	0.0	0.0	chr16	2983921	2984215	(87354130)	+	AluSq2	SINE/Alu	1	295	(18)	1398295
12	9.1	4.2	0.0	chr16	3021857	3021880	(87316465)	+	(CATT)n	Simple_repeat	1	25	(0)	1398345
12	10.1	9.4	0.0	chr16	3022674	3022705	(87315640)	+	(TCCCA)n	Simple_repeat	1	35	(0)	1398346
332	33.1	4.6	4.0	chr16	3101322	3101494	(87236851)	+	MIRb	SINE/MIR	70	243	(25)	1398495
1013	20.8	3.8	4.1	chr16	3101602	3101691	(87236654)	C	MER33	DNA/hAT-Charlie	(8)	316	232	1398496
672	0.0	0.0	0.0	chr16	3150674	3150746	(87187599)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1398597
417	13.4	0.0	1.5	chr16	3152162	3152228	(87186117)	C	AluJo	SINE/Alu	(185)	127	62	1398601
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
749	24.4	3.1	0.0	chr16	3156205	3156360	(87181985)	C	FRAM	SINE/Alu	(15)	161	1	1398610
37	0.0	0.0	0.0	chr16	3156405	3156438	(87181907)	+	(GCTG)n	Simple_repeat	1	34	(0)	1398611
654	1.4	0.0	0.0	chr16	3157405	3157477	(87180868)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	1398614
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
617	0.0	0.0	0.0	chr16	3172048	3172119	(87166226)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	1398650
635	0.0	0.0	0.0	chr16	3175691	3175763	(87162582)	+	tRNA-Lys-AAG	tRNA	1	73	(3)	1398660
622	0.0	0.0	0.0	chr16	3182635	3182706	(87155639)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1398678
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
18	3.8	3.7	0.0	chr16	3184218	3184244	(87154101)	+	(TGT)n	Simple_repeat	1	28	(0)	1398680
28	11.2	0.0	0.0	chr16	3188045	3188084	(87150261)	+	(A)n	Simple_repeat	1	40	(0)	1398692
635	0.0	0.0	0.0	chr16	3188094	3188167	(87150178)	+	tRNA-Pro-CCA	tRNA	1	74	(1)	1398693
622	0.0	0.0	0.0	chr16	3189634	3189705	(87148640)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	1398695
612	1.4	0.0	0.0	chr16	3191501	3191573	(87146772)	+	tRNA-Lys-AAG	tRNA	1	73	(3)	1398698
210	26.7	9.2	11.0	chr16	3328461	3328624	(87009721)	C	L2a	LINE/L2	(0)	3426	3222	1398960
46	2.3	0.0	0.0	chr16	3772323	3772366	(86565979)	+	(AC)n	Simple_repeat	1	44	(0)	1399790
189	29.1	0.0	0.0	chr16	3772397	3772451	(86565894)	+	MER5B	DNA/hAT-Charlie	1	55	(123)	1399791
758	25.1	9.4	0.0	chr16	3772475	3772677	(86565668)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1399792
2232	11.6	0.6	0.6	chr16	4058182	4058492	(86279853)	+	AluSz	SINE/Alu	1	311	(1)	1400350
228	25.4	9.7	11.6	chr16	4058493	4058555	(86279790)	C	MIR	SINE/MIR	(198)	64	2	1400348
14	22.7	0.0	2.3	chr16	4253899	4253941	(86084404)	+	G-rich	Low_complexity	1	43	(0)	1400765
17	16.1	0.0	6.4	chr16	4272869	4272915	(86065430)	+	(GGC)n	Simple_repeat	1	47	(0)	1400803
60	1.8	0.0	0.0	chr16	4272948	4273003	(86065342)	+	(GT)n	Simple_repeat	1	56	(0)	1400804
19	30.2	0.0	6.4	chr16	4273125	4273233	(86065112)	+	G-rich	Low_complexity	1	109	(0)	1400805
208	31.8	10.6	0.0	chr16	4344861	4344970	(85993375)	C	L2c	LINE/L2	(244)	3143	3021	1400976
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
49	25.4	0.0	2.3	chr16	5065043	5065174	(85273171)	+	(TGTG)n	Simple_repeat	1	132	(0)	1402492
216	30.4	7.3	1.7	chr16	10581001	10581117	(79757228)	+	MIR	SINE/MIR	32	155	(107)	1413755
12	14.9	8.1	0.0	chr16	11497381	11497417	(78840928)	+	G-rich	Low_complexity	1	40	(0)	1415823
2161	8.3	0.3	2.3	chr16	11743274	11743574	(78594771)	+	AluSx1	SINE/Alu	1	295	(17)	1416396
13	25.1	0.0	2.3	chr16	11836587	11836630	(78501715)	+	(ATAAGGA)n	Simple_repeat	1	44	(0)	1416611
1716	25.4	10.5	2.5	chr16	12539108	12540236	(77798109)	C	L1MD3	LINE/L1	(174)	6557	5326	1418138
343	35.7	5.5	0.0	chr16	12758212	12758382	(77579963)	C	MIRb	SINE/MIR	(63)	205	25	1418556
181	25.6	4.3	15.9	chr16	12758381	12758487	(77579858)	C	L2c	LINE/L2	(24)	3363	3270	1418557
19	19.7	0.0	2.1	chr16	12803887	12803934	(77534411)	+	G-rich	Low_complexity	1	48	(0)	1418653
400	16.7	0.0	0.0	chr16	13919548	13919607	(76418738)	+	AluJo	SINE/Alu	240	299	(13)	1421153
373	29.3	8.3	7.1	chr16	14013919	14014157	(76324188)	+	L2a	LINE/L2	3181	3422	(4)	1421317
545	32.0	5.1	7.2	chr16	14088230	14088451	(76249894)	C	MIRb	SINE/MIR	(32)	236	20	1421499
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
268	33.3	3.6	1.8	chr16	14672185	14672294	(75666051)	+	L2b	LINE/L2	3250	3361	(14)	1422644
1668	10.3	0.4	6.5	chr16	15056497	15056757	(75281588)	+	AluJr	SINE/Alu	4	248	(64)	1423503
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
394	14.5	0.0	0.0	chr16	15682191	15682259	(74656086)	C	AluJb	SINE/Alu	(1)	301	233	1424959
590	16.8	0.0	0.0	chr16	15682260	15682360	(74655985)	C	AluJb	SINE/Alu	(125)	187	87	1424959
846	14.9	0.0	0.0	chr16	18804656	18804769	(71533576)	+	AluJo	SINE/Alu	1	114	(198)	1431982
319	19.3	2.2	7.4	chr16	19137410	19137504	(71200841)	C	L1ME3A	LINE/L1	(252)	5921	5832	1432789
12	13.7	0.0	0.0	chr16	19521893	19521916	(70816429)	+	(CAG)n	Simple_repeat	1	24	(0)	1433766
345	22.7	6.0	6.8	chr16	19886270	19886387	(70451958)	+	L2a	LINE/L2	3304	3420	(6)	1434582
427	29.6	3.9	4.4	chr16	19886480	19886659	(70451686)	+	MIR	SINE/MIR	84	262	(0)	1434583
211	38.7	3.1	1.6	chr16	21158054	21158179	(69180166)	+	MIRc	SINE/MIR	24	151	(117)	1437299
218	16.5	8.0	5.6	chr16	21158366	21158463	(69179882)	+	MIRc	SINE/MIR	38	143	(125)	1437300
780	13.1	3.0	1.5	chr16	21300547	21300678	(69037667)	+	LTR57	LTR/ERVL	270	403	(8)	1437613
401	11.8	4.2	0.0	chr16	21300682	21300749	(69037596)	C	LTR41B	LTR/ERVL	(581)	177	107	1437614
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
297	28.7	11.8	1.9	chr16	22233074	22233233	(68105112)	+	L1ME4c	LINE/L1	540	717	(113)	1439604
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
12	7.8	7.4	0.0	chr16	22374463	22374489	(67963856)	+	(CCGG)n	Simple_repeat	1	29	(0)	1439922
473	31.4	5.0	0.0	chr16	22646776	22646947	(67691398)	+	MER102b	DNA/hAT-Charlie	153	333	(8)	1440517
1203	19.3	0.4	0.9	chr16	22660104	22660328	(67678017)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	1440546
46	7.6	0.0	0.0	chr16	23409065	23409121	(66929224)	+	(GT)n	Simple_repeat	1	57	(0)	1442203
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
484	23.4	0.9	0.9	chr16	23729858	23729965	(66608380)	+	LTR16A1	LTR/ERVL	54	161	(295)	1442970
552	33.3	2.8	0.4	chr16	23729983	23730226	(66608119)	+	LTR16A1	LTR/ERVL	207	456	(0)	1442970
34	3.0	0.0	0.0	chr16	23735243	23735276	(66603069)	+	(TG)n	Simple_repeat	1	34	(0)	1442989
298	26.4	12.5	0.0	chr16	23735460	23735527	(66602818)	C	Charlie7a	DNA/hAT-Charlie	(0)	272	205	1442990
46	5.7	0.0	0.0	chr16	24729669	24729723	(65608622)	+	(GCG)n	Simple_repeat	1	55	(0)	1445420
2228	16.7	2.4	0.5	chr16	24989743	24990158	(65348187)	+	L1MA5	LINE/L1	5877	6300	(0)	1445960
2573	17.3	2.5	4.2	chr16	25049628	25050152	(65288193)	+	Tigger3b	DNA/TcMar-Tigger	25	540	(691)	1446106
404	33.1	1.5	0.3	chr16	28277941	28278110	(62060235)	+	MIR	SINE/MIR	43	212	(56)	1453081
1153	11.3	0.0	0.0	chr16	28837566	28837716	(61500629)	+	AluSx	SINE/Alu	103	253	(59)	1454546
293	29.4	1.2	2.0	chr16	28846883	28846991	(61491354)	+	MIRb	SINE/MIR	114	220	(10)	1454566
6766	12.4	5.0	6.6	chr16	29782762	29784049	(60554296)	+	MER11A	LTR/ERVK	1	1266	(0)	1456558
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
1935	16.5	0.3	0.7	chr16	29944267	29944569	(60393776)	+	AluJb	SINE/Alu	1	302	(10)	1456932
365	29.8	8.1	6.4	chr16	30018485	30018689	(60319656)	C	L2c	LINE/L2	(807)	2612	2406	1457077
228	28.7	1.8	6.9	chr16	30018704	30018819	(60319526)	C	L2-1_AMi	LINE/L2	(812)	423	314	1457083
415	30.1	2.2	6.4	chr16	30018901	30019035	(60319310)	C	L2c	LINE/L2	(1349)	2070	1936	1457077
2248	11.8	0.0	0.0	chr16	30019036	30019331	(60319014)	+	AluSx1	SINE/Alu	1	296	(16)	1457084
378	32.1	1.2	12.0	chr16	30021886	30021966	(60316379)	+	MIR	SINE/MIR	83	154	(108)	1457091
2351	9.7	1.0	0.3	chr16	30021967	30022276	(60316069)	+	AluSx	SINE/Alu	1	312	(0)	1457092
17	22.0	1.8	3.5	chr16	30064328	30064383	(60273962)	+	G-rich	Low_complexity	1	57	(0)	1457196
2215	6.5	1.3	5.2	chr16	30075444	30075752	(60262593)	+	AluSp	SINE/Alu	1	297	(16)	1457215
26	0.0	0.0	0.0	chr16	30076007	30076031	(60262314)	+	(GCG)n	Simple_repeat	1	25	(0)	1457216
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
14	21.2	4.5	0.0	chr16	30377710	30377753	(59960592)	+	G-rich	Low_complexity	1	46	(0)	1457879
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
11	19.2	9.1	1.7	chr16	30400368	30400422	(59937923)	+	(CCCGGACA)n	Simple_repeat	1	60	(0)	1457932
2527	4.7	0.7	0.0	chr16	30400965	30401260	(59937085)	C	AluSg	SINE/Alu	(12)	298	1	1457933
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
355	27.4	4.9	3.3	chr16	30570596	30570716	(59767629)	+	MIRb	SINE/MIR	115	237	(31)	1458364
51	0.0	0.0	0.0	chr16	30570723	30570768	(59767577)	+	(TTAT)n	Simple_repeat	1	46	(0)	1458365
322	5.1	0.0	0.0	chr16	30570769	30570807	(59767538)	C	Alu	SINE/Alu	(18)	283	245	1458366
1075	11.5	0.0	3.6	chr16	30747851	30748015	(59590330)	+	AluJr	SINE/Alu	137	295	(17)	1458788
1587	16.1	0.0	0.4	chr16	30899761	30899996	(59438349)	C	AluJo	SINE/Alu	(21)	291	57	1459140
336	27.4	16.2	1.7	chr16	30900015	30900186	(59438159)	+	MIR3	SINE/MIR	1	192	(16)	1459141
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
12	20.5	0.0	2.8	chr16	31179819	31179854	(59158491)	+	(CCCCCG)n	Simple_repeat	1	36	(0)	1459794
3207	20.5	10.9	6.4	chr16	47058591	47059001	(43279344)	C	MER21C	LTR/ERVL	(365)	573	124	1466658
1779	15.2	6.1	5.3	chr16	47059002	47059252	(43279093)	C	MER2	DNA/TcMar-Tigger	(0)	345	82	1466660
16	19.2	0.0	0.0	chr16	48353980	48354009	(41984336)	+	(T)n	Simple_repeat	1	30	(0)	1468593
504	33.0	4.0	1.4	chr16	48630689	48630909	(41707436)	C	MIR	SINE/MIR	(20)	242	16	1469144
329	25.2	7.0	3.6	chr16	50024841	50024951	(40313394)	+	L2a	LINE/L2	3311	3425	(1)	1471634
272	35.7	10.8	3.2	chr16	50155488	50155675	(40182670)	+	LFSINE_Vert	SINE/tRNA	119	322	(137)	1471937
237	31.9	2.1	2.1	chr16	50209693	50209785	(40128560)	C	MIR3	SINE/MIR	(83)	125	33	1472063
24	28.7	0.0	4.2	chr16	52469653	52469748	(37868597)	+	(GATA)n	Simple_repeat	1	96	(0)	1476034
273	29.8	6.8	6.1	chr16	52545302	52545433	(37792912)	C	L2b	LINE/L2	(17)	3358	3226	1476156
12	21.9	4.3	2.1	chr16	52545604	52545649	(37792696)	+	A-rich	Low_complexity	1	48	(0)	1476157
831	29.2	12.3	6.6	chr16	53734541	53735113	(36603232)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	1	1478332
535	35.0	3.9	1.6	chr16	53735245	53735494	(36602851)	C	L2b	LINE/L2	(2)	3373	3118	1478333
7904	9.6	1.2	0.4	chr16	54727281	54727993	(35610352)	C	L1PB	LINE/L1	(730)	5424	4708	1480029
326	29.3	8.4	4.1	chr16	56451994	56452164	(33886181)	+	MIRb	SINE/MIR	3	181	(87)	1483064
19	0.0	0.0	0.0	chr16	56931236	56931256	(33407089)	+	(T)n	Simple_repeat	1	21	(0)	1483994
38	16.3	1.3	1.3	chr16	57185900	57185977	(33152368)	+	GA-rich	Low_complexity	1	79	(0)	1484532
438	13.1	19.5	0.0	chr16	57299651	57299749	(33038596)	+	MER113	DNA/hAT-Charlie	240	362	(159)	1484765
625	8.4	0.0	0.0	chr16	57299951	57300033	(33038312)	+	tRNA-Leu-CTG	tRNA	1	83	(3)	1484766
358	19.7	10.2	0.8	chr16	57300190	57300285	(33038060)	+	AluJb	SINE/Alu	209	293	(9)	1484767
625	8.4	0.0	0.0	chr16	57300480	57300562	(33037783)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	1484768
387	28.4	16.6	1.0	chr16	57462315	57462527	(32875818)	C	L1ME3G	LINE/L1	(344)	580	317	1485115
829	16.9	0.0	0.0	chr16	57676718	57676841	(32661504)	+	AluJr	SINE/Alu	1	124	(188)	1485556
490	32.3	2.6	12.5	chr16	57676851	57676919	(32661426)	+	MIRb	SINE/MIR	169	225	(43)	1485555
1862	16.9	1.3	0.0	chr16	57818365	57818659	(32519686)	C	AluJb	SINE/Alu	(12)	300	2	1485807
187	28.7	15.0	0.9	chr16	57818660	57818703	(32519642)	C	MIRc	SINE/MIR	(199)	69	12	1485800
12	18.8	2.6	2.6	chr16	58129651	58129688	(32208657)	+	(ACGTG)n	Simple_repeat	1	39	(0)	1486505
181	20.8	15.4	4.9	chr16	66608573	66608653	(23729692)	+	MIRc	SINE/MIR	14	104	(164)	1500053
858	23.4	6.8	4.7	chr16	66740684	66740957	(23597388)	+	MLT1J	LTR/ERVL-MaLR	225	504	(8)	1500318
212	21.6	5.6	3.8	chr16	66741033	66741085	(23597260)	+	L2a	LINE/L2	3342	3395	(31)	1500319
466	31.6	13.7	0.5	chr16	66879815	66880202	(23458143)	C	L2	LINE/L2	(620)	2799	2353	1500613
43	0.0	0.0	0.0	chr16	66902101	66902137	(23436208)	+	(CA)n	Simple_repeat	1	37	(0)	1500656
426	31.1	14.6	2.0	chr16	67028440	67028642	(23309703)	C	MIRb	SINE/MIR	(15)	253	21	1500921
2486	6.5	0.0	0.0	chr16	67160429	67160734	(23177611)	+	AluSx	SINE/Alu	1	306	(6)	1501198
314	31.0	7.0	0.0	chr16	67278694	67278838	(23059507)	C	MIRb	SINE/MIR	(79)	189	34	1501367
16	11.9	0.0	7.1	chr16	67428459	67428500	(22909845)	+	(GGCTGAG)n	Simple_repeat	1	42	(0)	1501625
344	28.6	13.2	0.6	chr16	67563894	67564072	(22774273)	C	X6A_LINE	LINE/CR1	(6)	1074	870	1501895
194	32.5	6.6	10.2	chr16	67847927	67848053	(22490292)	+	L3	LINE/CR1	3810	3931	(168)	1502470
19	12.9	0.0	2.7	chr16	68085612	68085648	(22252697)	+	(GCC)n	Simple_repeat	1	37	(0)	1502902
11	24.2	5.5	1.7	chr16	68085649	68085665	(22252680)	+	(AGCTGC)n	Simple_repeat	2	58	(0)	1502903
16	31.3	1.4	1.4	chr16	69106518	69106590	(21231755)	+	(CCCCCTC)n	Simple_repeat	1	74	(0)	1505104
307	29.6	6.0	0.8	chr16	69195776	69195901	(21142444)	C	MLT1K	LTR/ERVL-MaLR	(369)	226	94	1505286
1950	15.7	1.0	0.3	chr16	69195959	69196257	(21142088)	+	AluJb	SINE/Alu	1	301	(11)	1505287
13	24.9	2.0	2.0	chr16	69311577	69311625	(21026720)	+	G-rich	Low_complexity	1	50	(0)	1505548
2594	5.5	0.3	0.3	chr16	69386211	69386520	(20951825)	+	AluSp	SINE/Alu	1	310	(3)	1505677
1427	22.1	8.9	6.9	chr16	69428172	69428377	(20909968)	C	L2a	LINE/L2	(0)	3426	3214	1505787
357	34.9	3.1	2.3	chr16	69436166	69436294	(20902051)	C	L2b	LINE/L2	(27)	3348	3219	1505807
1690	17.2	4.6	0.7	chr16	70628787	70629076	(19709269)	C	AluJr	SINE/Alu	(10)	302	1	1508399
297	31.6	3.1	0.6	chr16	70629083	70629238	(19709107)	C	L1ME3A	LINE/L1	(1871)	4275	4116	1508396
636	2.7	0.0	0.0	chr16	70779036	70779109	(19559236)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	1508603
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
375	30.1	3.1	0.8	chr16	71484168	71484291	(18854054)	+	L2b	LINE/L2	3228	3354	(21)	1509763
207	32.9	1.2	2.5	chr16	71611615	71611695	(18726650)	+	MER5B	DNA/hAT-Charlie	26	105	(73)	1510008
1372	20.2	8.0	3.0	chr16	71611808	71612164	(18726181)	+	LTR37A	LTR/ERV1	13	390	(36)	1510009
61	0.0	0.0	0.0	chr16	72931405	72931456	(17406889)	+	(AC)n	Simple_repeat	1	52	(0)	1512164
16	0.0	0.0	0.0	chr16	72931567	72931584	(17406761)	+	(A)n	Simple_repeat	1	18	(0)	1512165
18	0.0	0.0	0.0	chr16	73070711	73070730	(17267615)	+	(TC)n	Simple_repeat	1	20	(0)	1512351
1350	21.0	1.8	1.8	chr16	74604207	74604478	(15733867)	+	MER2B	DNA/TcMar-Tigger	65	336	(0)	1515034
12	26.5	5.0	1.6	chr16	74985009	74985068	(15353277)	+	(CGC)n	Simple_repeat	1	63	(0)	1515869
188	20.3	8.0	6.8	chr16	75251092	75251165	(15087180)	C	MIR3	SINE/MIR	(53)	155	81	1516383
441	27.5	17.9	0.0	chr16	75305483	75305675	(15032670)	+	MIR	SINE/MIR	13	247	(15)	1516502
15719	14.4	3.1	4.0	chr16	75433679	75434907	(14903438)	+	Tigger17	DNA/TcMar-Tigger	1	1199	(1474)	1516787
16	17.5	2.6	0.0	chr16	75555731	75555769	(14782576)	+	(CCCCAT)n	Simple_repeat	1	40	(0)	1517047
237	33.0	1.5	10.7	chr16	77273919	77274142	(13064203)	C	LTR16C	LTR/ERVL	(286)	203	1	1519550
337	34.9	8.1	2.1	chr16	77459459	77459681	(12878664)	+	MIR	SINE/MIR	27	256	(6)	1519884
317	24.8	4.9	5.7	chr16	77896394	77896517	(12441828)	+	MIRb	SINE/MIR	128	250	(18)	1520692
1066	25.4	7.8	0.3	chr16	78184844	78185127	(12153218)	C	MLT1I	LTR/ERVL-MaLR	(7)	404	98	1521281
2152	16.5	7.6	0.0	chr16	78645403	78645801	(11692544)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	1522110
1336	26.3	4.8	6.0	chr16	78645802	78646178	(11692167)	C	MLT1D	LTR/ERVL-MaLR	(104)	401	27	1522109
41	7.4	1.8	0.0	chr16	79598582	79598638	(10739707)	+	(GT)n	Simple_repeat	1	58	(0)	1523832
14	11.7	3.6	0.0	chr16	79598662	79598689	(10739656)	+	(GGT)n	Simple_repeat	1	29	(0)	1523833
28	15.9	3.6	0.0	chr16	80573686	80573741	(9764604)	+	(AC)n	Simple_repeat	1	58	(0)	1525531
489	25.5	14.5	0.9	chr16	80837948	80838162	(9500183)	C	L2a	LINE/L2	(2)	3424	3129	1525971
254	29.5	0.0	1.3	chr16	81746341	81746419	(8591926)	+	L1M6	LINE/L1	440	517	(5979)	1527925
2265	10.7	0.0	0.0	chr16	84121376	84121673	(6216672)	C	AluSg	SINE/Alu	(12)	298	1	1532180
1020	14.5	1.3	0.0	chr16	84177274	84177425	(6160920)	C	AluSx1	SINE/Alu	(8)	304	151	1532293
31	0.0	0.0	0.0	chr16	85151671	85151699	(5186646)	+	(CAGGCAG)n	Simple_repeat	1	29	(0)	1534287
417	25.4	2.0	0.0	chr16	85174541	85174655	(5163690)	C	L2a	LINE/L2	(3)	3423	3262	1534328
352	28.8	10.7	0.0	chr16	85430113	85430237	(4908108)	C	MIR	SINE/MIR	(3)	259	120	1534822
363	22.7	3.4	1.2	chr16	85430331	85430443	(4907902)	C	MIR1_Amn	SINE/MIR	(34)	174	65	1534823
264	11.0	7.2	1.5	chr16	85572020	85572574	(4765771)	+	(AC)n	Simple_repeat	1	595	(0)	1535081
292	22.2	17.5	0.0	chr16	85591750	85591848	(4746497)	C	L2a	LINE/L2	(1)	3425	3306	1535108
648	24.7	1.6	3.1	chr16	85591854	85592045	(4746300)	+	MER3	DNA/hAT-Charlie	1	189	(20)	1535109
247	22.1	3.4	0.2	chr16	85612823	85612886	(4725459)	C	L2a	LINE/L2	(21)	3405	3290	1535145
266	30.8	12.1	1.4	chr16	86363366	86363645	(3974700)	+	L1ME4a	LINE/L1	5746	6059	(65)	1536515
505	25.9	4.0	2.0	chr16	86364953	86365098	(3973247)	C	MLT1D	LTR/ERVL-MaLR	(356)	149	1	1536516
553	24.2	20.5	0.0	chr16	86365291	86365476	(3972869)	+	MIR	SINE/MIR	17	250	(12)	1536517
17	30.0	0.0	5.6	chr16	86576147	86576211	(3762134)	+	(TTTGTTT)n	Simple_repeat	1	85	(0)	1536869
798	25.3	9.3	16.6	chr16	87163805	87163934	(3174411)	+	LTR33B	LTR/ERVL	62	171	(332)	1537918
13	4.1	3.7	3.6	chr16	87388506	87388532	(2949813)	+	(AGAGG)n	Simple_repeat	1	28	(0)	1538349
238	34.4	0.0	0.0	chr16	87541574	87541666	(2796679)	+	MER5A	DNA/hAT-Charlie	47	139	(50)	1538622
343	33.8	7.3	3.1	chr16	87541748	87541970	(2796375)	C	L1MC4a	LINE/L1	(1853)	6029	5797	1538623
409	28.6	0.0	0.0	chr16	87777617	87777728	(2560617)	+	L1MC	LINE/L1	5406	5517	(816)	1539045
254	30.9	4.1	4.3	chr16	88771233	88771366	(1566979)	C	MIRc	SINE/MIR	(93)	175	37	1540410
333	22.7	18.5	0.0	chr16	88809124	88809264	(1529081)	+	MLT1D	LTR/ERVL-MaLR	296	468	(37)	1540475
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
2302	12.1	0.0	0.0	chr16	89428614	89428919	(909426)	+	AluSg	SINE/Alu	1	306	(4)	1541246
204	18.8	5.9	0.0	chr16	89874465	89874512	(463833)	C	MIRb	SINE/MIR	(48)	220	170	1542010
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
302	23.0	18.0	0.0	chr16	90022365	90022464	(315881)	C	L2a	LINE/L2	(2)	3424	3303	1542246
15	18.1	0.0	0.0	chr17	410591	410622	(82846819)	+	GA-rich	Low_complexity	1	32	(0)	1545160
256	25.7	6.3	0.0	chr17	928063	928136	(82329305)	+	MIRc	SINE/MIR	166	244	(24)	1546059
540	36.4	8.7	2.0	chr17	928193	928545	(82328896)	+	L3	LINE/CR1	2813	3191	(908)	1546060
189	32.2	5.6	6.3	chr17	1115308	1115433	(82142008)	+	L2b	LINE/L2	3013	3137	(238)	1546377
13	0.0	14.3	0.0	chr17	1268404	1268431	(81989010)	+	(CCCG)n	Simple_repeat	1	32	(0)	1546738
2426	6.0	0.6	1.6	chr17	1268681	1268995	(81988446)	C	AluSx1	SINE/Alu	(0)	312	1	1546739
2253	7.7	4.4	0.0	chr17	1462997	1463281	(81794160)	C	AluSx	SINE/Alu	(14)	298	1	1547192
1252	26.2	6.8	4.5	chr17	1463282	1463812	(81793629)	+	MLT1K	LTR/ERVL-MaLR	34	577	(18)	1547193
17	19.6	0.0	5.8	chr17	2400961	2401012	(80856429)	+	(CTCC)n	Simple_repeat	1	52	(0)	1549024
421	21.7	11.7	1.4	chr17	2484255	2484267	(80773174)	+	Charlie10b	DNA/hAT-Charlie	3	241	(1)	1549204
320	23.9	21.8	1.7	chr17	2484268	2484446	(80772995)	C	Charlie10a	DNA/hAT-Charlie	(54)	226	2	1549205
3187	12.7	4.5	1.8	chr17	2484986	2485499	(80771942)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1549207
22	25.0	2.2	4.3	chr17	2749665	2749756	(80507685)	+	GA-rich	Low_complexity	1	94	(0)	1549847
1914	27.2	9.1	3.2	chr17	2975257	2975506	(80281935)	+	L1MEi	LINE/L1	2073	2387	(3759)	1550361
533	25.3	20.1	1.9	chr17	2975525	2975946	(80281495)	+	LTR79	LTR/ERVL	10	514	(13)	1550364
468	33.6	8.5	0.9	chr17	3888400	3888627	(79368814)	+	MIR	SINE/MIR	16	262	(0)	1551942
230	32.6	15.5	3.5	chr17	4256954	4257490	(78999951)	+	L2c	LINE/L2	2353	2965	(454)	1552629
558	35.7	0.0	0.9	chr17	4420856	4421067	(78836374)	C	MamGypLTR3	LTR/Gypsy	(393)	501	292	1553038
2358	7.9	0.0	0.3	chr17	4421144	4421448	(78835993)	C	AluSq	SINE/Alu	(8)	305	2	1553039
390	26.6	8.3	5.3	chr17	4742678	4742902	(78514539)	+	MIR3	SINE/MIR	7	261	(7)	1553657
1604	14.9	7.1	0.4	chr17	4742977	4743251	(78514190)	+	AluJb	SINE/Alu	1	295	(17)	1553658
244	24.2	4.6	3.1	chr17	5419929	5419992	(77837449)	+	L2	LINE/L2	2380	2444	(975)	1555105
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
14	26.8	3.7	0.0	chr17	7020145	7020198	(76237243)	+	G-rich	Low_complexity	1	56	(0)	1558092
13	18.3	4.3	4.1	chr17	7242376	7242422	(76015019)	+	(GGC)n	Simple_repeat	1	49	(0)	1558486
12	23.3	0.0	0.0	chr17	7314947	7314981	(75942460)	+	(GCTCCC)n	Simple_repeat	1	35	(0)	1558614
673	2.6	0.0	0.0	chr17	8119155	8119230	(75138211)	+	tRNA-Lys-AAA	tRNA	1	76	(0)	1560127
701	22.2	9.4	2.9	chr17	8119377	8119654	(75137787)	C	MER33	DNA/hAT-Charlie	(22)	302	5	1560128
643	2.8	0.0	0.0	chr17	8119752	8119823	(75137618)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	1560129
707	2.4	0.0	0.0	chr17	8120314	8120395	(75137046)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	1560130
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
22	12.4	11.1	1.4	chr17	8123338	8123400	(75134041)	+	(TC)n	Simple_repeat	1	70	(0)	1560135
15	20.4	7.7	3.6	chr17	8123401	8123415	(75134026)	+	(TCTCG)n	Simple_repeat	1	84	(0)	1560136
648	1.4	0.0	0.0	chr17	8125746	8125817	(75131624)	+	tRNA-Gly-GGY	tRNA	1	72	(2)	1560137
3368	26.6	10.9	4.8	chr17	8138308	8138688	(75118753)	C	L2a	LINE/L2	(1677)	1742	1320	1560160
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
691	0.0	0.0	0.0	chr17	8139452	8139525	(75117916)	C	tRNA-Thr-ACY	tRNA	(3)	74	1	1560172
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
650	1.4	0.0	0.0	chr17	8220869	8220940	(75036501)	C	tRNA-Trp-TGG	tRNA	(3)	72	1	1560357
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
653	0.0	0.0	0.0	chr17	8222238	8222309	(75035132)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	1560360
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
678	3.9	0.0	0.0	chr17	8226232	8226308	(75031133)	C	tRNA-Thr-ACY	tRNA	(0)	77	1	1560365
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
366	27.3	11.5	1.8	chr17	8435283	8435466	(74821975)	C	L2a	LINE/L2	(0)	3426	3194	1560831
249	26.3	4.8	3.9	chr17	9143564	9143666	(74113775)	C	Tigger15a	DNA/TcMar-Tigger	(565)	150	47	1562150
16986	15.6	2.6	2.1	chr17	9509281	9512466	(73744975)	+	L1MA5A	LINE/L1	3069	6272	(1290)	1562846
1615	16.7	6.7	0.0	chr17	9512467	9512729	(73744712)	C	AluSg	SINE/Alu	(15)	295	14	1562849
993	19.3	0.0	0.0	chr17	10060656	10060831	(73196610)	+	L1M5	LINE/L1	5460	5635	(544)	1563949
381	19.4	1.1	2.1	chr17	10060841	10060935	(73196506)	+	MER20	DNA/hAT-Charlie	3	96	(123)	1563950
222	20.0	0.0	0.0	chr17	11997717	11997761	(71259680)	C	MIRb	SINE/MIR	(14)	254	210	1567386
262	30.6	2.0	0.0	chr17	12020534	12020631	(71236810)	C	Charlie4z	DNA/hAT-Charlie	(14)	153	54	1567442
188	31.5	15.4	3.2	chr17	12022622	12022870	(71234571)	C	L2b	LINE/L2	(9)	3417	3133	1567446
277	30.7	1.3	0.0	chr17	12022883	12022957	(71234484)	C	L2b	LINE/L2	(300)	3075	3000	1567446
17	7.0	0.0	5.9	chr17	15651820	15651853	(67605588)	+	(CTCAGG)n	Simple_repeat	1	34	(0)	1573445
278	32.0	15.2	0.0	chr17	16419459	16419608	(66837833)	+	MIR	SINE/MIR	12	188	(74)	1574953
345	31.6	14.9	0.6	chr17	16438620	16438801	(66818640)	C	MIRc	SINE/MIR	(7)	261	56	1574991
606	13.4	11.2	0.9	chr17	17001744	17001855	(66255586)	+	AluJo	SINE/Alu	147	271	(41)	1575911
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
2269	21.6	5.6	7.2	chr17	17523849	17524483	(65732958)	C	L1MB7	LINE/L1	(95)	6089	5451	1576799
289	33.4	14.9	1.9	chr17	17835886	17836193	(65421248)	+	L2b	LINE/L2	3003	3357	(18)	1577444
412	32.2	8.6	4.0	chr17	17919036	17919258	(65338183)	+	MIRb	SINE/MIR	4	237	(31)	1577572
614	25.2	13.1	1.8	chr17	17922534	17922755	(65334686)	+	MIR	SINE/MIR	1	251	(11)	1577578
244	29.1	9.8	3.5	chr17	17958222	17958335	(65299106)	C	MIR1_Amn	SINE/MIR	(72)	136	15	1577659
191	30.4	13.2	9.9	chr17	17963087	17963247	(65294194)	C	MIRc	SINE/MIR	(49)	219	53	1577671
591	28.1	6.9	2.1	chr17	17963431	17963649	(65293792)	+	MIRb	SINE/MIR	30	260	(2)	1577672
200	23.3	9.1	4.8	chr17	18038455	18038517	(65218924)	C	L2b	LINE/L2	(24)	3351	3286	1577825
342	27.8	16.9	2.2	chr17	18362898	18363066	(64894375)	+	MIR	SINE/MIR	18	222	(46)	1578435
458	23.3	1.9	1.9	chr17	18960712	18960816	(64296625)	C	MIR3	SINE/MIR	(27)	181	77	1579508
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
446	15.9	8.9	6.5	chr17	19992952	19993126	(63264315)	+	FRAM	SINE/Alu	6	296	(6)	1581721
1967	13.9	1.3	0.0	chr17	19993138	19993440	(63264001)	+	AluJo	SINE/Alu	6	312	(0)	1581722
1688	17.6	11.2	0.3	chr17	20093082	20093406	(63164035)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1581926
379	29.7	8.1	4.9	chr17	20093407	20093470	(63163971)	+	MIRb	SINE/MIR	144	227	(35)	1581925
470	22.7	0.9	0.9	chr17	20908916	20909026	(62348415)	+	MER125	DNA	4	114	(62)	1583315
453	21.4	15.9	4.4	chr17	21043779	21043983	(62213458)	C	Charlie5	DNA/hAT-Charlie	(24)	2600	2368	1583518
1133	15.7	0.5	1.0	chr17	21211311	21211510	(62045931)	+	MER3	DNA/hAT-Charlie	1	199	(10)	1583853
271	29.8	9.6	5.8	chr17	27352907	27353077	(55904364)	C	L2c	LINE/L2	(274)	3113	2936	1586597
226	20.9	2.9	5.6	chr17	27353141	27353211	(55904230)	+	MER5A1	DNA/hAT-Charlie	6	74	(92)	1586598
711	17.6	0.4	0.2	chr17	27353198	27353336	(55904105)	+	FLAM_C	SINE/Alu	13	220	(82)	1586599
744	29.7	5.9	0.5	chr17	28553407	28553629	(54703812)	C	MIRb	SINE/MIR	(8)	260	25	1588904
43	0.0	0.0	0.0	chr17	28553640	28553676	(54703765)	+	(AC)n	Simple_repeat	1	37	(0)	1588905
565	30.1	11.2	1.4	chr17	28661339	28661547	(54595894)	+	MIRb	SINE/MIR	27	258	(10)	1589100
1912	9.7	5.7	0.7	chr17	28719056	28719324	(54538117)	C	AluJb	SINE/Alu	(29)	283	1	1589194
206	23.2	6.7	0.0	chr17	28719340	28719395	(54538046)	+	MIR3	SINE/MIR	67	126	(82)	1589195
2559	7.1	0.0	0.3	chr17	28727612	28727920	(54529521)	C	AluSx	SINE/Alu	(4)	308	1	1589205
557	25.5	12.6	2.1	chr17	28733546	28733737	(54523704)	C	MIRb	SINE/MIR	(0)	268	54	1589220
2333	9.5	0.0	1.0	chr17	28793743	28794047	(54463394)	C	AluSp	SINE/Alu	(10)	303	2	1589334
12	19.7	2.3	4.4	chr17	28812233	28812276	(54445165)	+	(CGCTC)n	Simple_repeat	1	45	(0)	1589376
11	29.8	1.6	3.2	chr17	28812417	28812477	(54444964)	+	(CCCCAGC)n	Simple_repeat	1	62	(0)	1589377
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
1769	14.2	2.6	6.3	chr17	28982649	28982965	(54274476)	C	AluJb	SINE/Alu	(7)	305	1	1589706
609	25.7	2.0	2.0	chr17	28983062	28983212	(54274229)	+	MIRb	SINE/MIR	2	152	(116)	1589707
275	33.6	0.0	0.9	chr17	29042850	29042963	(54214478)	+	Eulor8	DNA/TcMar?	381	493	(69)	1589828
15	13.9	0.0	0.0	chr17	29292400	29292423	(53965018)	+	(T)n	Simple_repeat	1	24	(0)	1590284
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
13	25.9	3.2	3.1	chr17	29589778	29589840	(53667601)	+	(GGCCGC)n	Simple_repeat	1	65	(0)	1590972
180	23.9	2.1	0.0	chr17	29590222	29590267	(53667174)	C	L3b	LINE/CR1	(95)	5137	5091	1590973
858	16.1	4.3	1.3	chr17	29682335	29682491	(53574950)	+	MER3	DNA/hAT-Charlie	1	162	(47)	1591120
49	0.0	0.0	0.0	chr17	29744861	29744902	(53512539)	+	(GT)n	Simple_repeat	1	42	(0)	1591253
2453	10.0	0.0	0.0	chr17	29745148	29745458	(53511983)	C	AluSx1	SINE/Alu	(0)	312	2	1591254
568	33.5	9.0	2.5	chr17	29924330	29924818	(53332623)	C	Tigger15a	DNA/TcMar-Tigger	(12)	703	180	1591627
18	23.6	2.2	6.5	chr17	29930050	29930066	(53327375)	+	G-rich	Low_complexity	1	87	(0)	1591635
17	26.2	4.4	0.0	chr17	29930067	29930134	(53327307)	+	(GGAGCGG)n	Simple_repeat	1	71	(0)	1591636
262	31.6	2.2	4.9	chr17	30095960	30096102	(53161339)	+	LTR104_Mam	LTR/Gypsy	62	200	(1309)	1591906
763	18.4	7.9	0.6	chr17	30116439	30116613	(53140828)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1591965
29	0.0	0.0	0.0	chr17	30291955	30291981	(52965460)	+	(CGG)n	Simple_repeat	1	27	(0)	1592285
33	3.1	0.0	0.0	chr17	30394894	30394926	(52862515)	+	(TG)n	Simple_repeat	1	33	(0)	1592513
14	24.7	0.0	2.2	chr17	30822557	30822601	(52434840)	+	A-rich	Low_complexity	1	45	(0)	1593358
228	31.1	1.0	2.8	chr17	31744541	31744646	(51512795)	C	L4_C_Mam	LINE/RTE-X	(254)	4884	4781	1595219
2384	7.1	0.0	0.3	chr17	31936291	31936586	(51320855)	+	AluSx3	SINE/Alu	1	295	(16)	1595691
16	0.0	0.0	0.0	chr17	32299047	32299063	(50958378)	+	(T)n	Simple_repeat	1	17	(0)	1596496
255	24.6	1.7	0.0	chr17	34609777	34609833	(48647608)	C	Charlie15a	DNA/hAT-Charlie	(166)	58	1	1600731
25	21.1	5.3	0.0	chr17	34980634	34980709	(48276732)	+	(CGCGG)n	Simple_repeat	1	80	(0)	1601461
702	25.6	10.6	0.5	chr17	34982003	34982214	(48275227)	C	MIR	SINE/MIR	(0)	262	27	1601464
652	20.2	3.5	5.1	chr17	35243779	35243955	(48013486)	C	PrimLTR79	LTR/ERV1	(1)	502	329	1601983
1931	14.2	3.4	4.0	chr17	35256832	35257153	(48000288)	+	MER1B	DNA/hAT-Charlie	1	320	(19)	1602005
263	36.7	1.4	0.7	chr17	35257313	35257452	(47999989)	+	MamRep605	LTR?	670	810	(39)	1602004
760	24.6	3.5	9.2	chr17	35374931	35375234	(47882207)	+	L1MEf	LINE/L1	1625	1910	(4505)	1602151
186	29.7	8.6	4.5	chr17	35568569	35568635	(47688806)	C	L2a	LINE/L2	(2)	3424	3355	1602412
18	23.6	0.0	0.0	chr17	35587383	35587428	(47670013)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	1602448
677	31.3	7.7	4.5	chr17	35807962	35808453	(47448988)	+	L2c	LINE/L2	2458	2966	(453)	1602852
1174	17.7	7.0	2.6	chr17	38351183	38351454	(44905987)	+	MER63D	DNA/hAT-Blackjack	777	1061	(0)	1607688
276	32.8	8.8	0.0	chr17	38542724	38542857	(44714584)	+	MIR3	SINE/MIR	41	187	(21)	1608074
195	26.7	3.2	0.0	chr17	38542939	38542998	(44714443)	+	L2b	LINE/L2	3309	3370	(5)	1608075
36	19.3	3.9	5.2	chr17	38705133	38705262	(44552179)	+	(GGCG)n	Simple_repeat	1	135	(0)	1608410
698	1.3	0.0	0.0	chr17	38751778	38751854	(44505587)	C	tRNA-Asn-AAC	tRNA	(0)	77	1	1608489
2178	10.3	0.7	1.0	chr17	38854254	38854553	(44402888)	C	AluSx1	SINE/Alu	(13)	299	1	1608734
628	4.1	0.0	0.0	chr17	38869291	38869363	(44388078)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608779
54	0.0	0.0	0.0	chr17	39153335	39153380	(44104061)	+	(GT)n	Simple_repeat	1	46	(0)	1609429
725	10.8	1.0	0.0	chr17	39153382	39153483	(44103958)	C	AluJo	SINE/Alu	(15)	297	195	1609430
619	15.8	15.9	0.0	chr17	39153486	39153612	(44103829)	C	MER5A	DNA/hAT-Charlie	(38)	151	1	1609431
641	2.7	0.0	0.0	chr17	39153733	39153805	(44103636)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609432
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
390	24.6	18.3	0.0	chr17	39238850	39238983	(44018458)	C	MIRc	SINE/MIR	(44)	224	61	1609599
2505	7.0	0.0	0.3	chr17	39460851	39461162	(43796279)	+	AluSx1	SINE/Alu	1	311	(1)	1610147
388	30.2	10.8	1.4	chr17	39623691	39623879	(43633562)	C	MIRb	SINE/MIR	(56)	212	6	1610482
343	24.8	10.8	4.1	chr17	39927856	39928002	(43329439)	C	MIRc	SINE/MIR	(109)	159	2	1611011
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
1659	17.7	3.4	0.7	chr17	40114894	40115176	(43142265)	+	AluJb	SINE/Alu	1	291	(21)	1611371
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
195	25.4	0.0	8.3	chr17	40287313	40287372	(42970069)	+	MIR3	SINE/MIR	40	94	(114)	1611780
241	31.4	11.1	2.5	chr17	40317007	40317137	(42940304)	+	MIR3	SINE/MIR	16	158	(50)	1611822
21	18.0	1.9	1.9	chr17	40341547	40341598	(42915843)	+	G-rich	Low_complexity	1	53	(0)	1611854
762	24.7	5.7	3.7	chr17	40620509	40620895	(42636546)	C	MER39	LTR/ERV1	(60)	647	308	1612394
549	26.4	1.8	1.8	chr17	40903763	40903928	(42353513)	C	L2a	LINE/L2	(0)	3426	3261	1612837
470	29.1	7.2	2.9	chr17	41513179	41513406	(41744035)	+	MIRc	SINE/MIR	2	232	(36)	1613737
15	14.3	1.6	1.6	chr17	41786597	41786641	(41470800)	+	G-rich	Low_complexity	1	45	(0)	1614292
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
12	20.3	0.0	9.3	chr17	41919182	41919235	(41338206)	+	G-rich	Low_complexity	1	54	(0)	1614562
184	4.2	4.0	4.5	chr17	42221893	42222215	(41035226)	+	(TG)n	Simple_repeat	1	336	(0)	1615176
35	2.8	0.0	0.0	chr17	42253108	42253144	(41004297)	+	(CTTT)n	Simple_repeat	1	37	(0)	1615238
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
12	16.5	7.0	2.2	chr17	42678109	42678151	(40579290)	+	(GCGGCC)n	Simple_repeat	1	46	(0)	1616133
27	14.6	1.9	0.0	chr17	42678337	42678389	(40579052)	+	G-rich	Low_complexity	1	54	(0)	1616134
38	21.3	9.5	0.6	chr17	42682577	42682724	(40574717)	+	GA-rich	Low_complexity	1	162	(0)	1616146
15	19.6	0.0	0.0	chr17	42682757	42682791	(40574650)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	1616147
230	29.5	18.4	0.8	chr17	42832806	42832935	(40424506)	+	MIR3	SINE/MIR	16	173	(35)	1616448
291	27.4	1.9	7.0	chr17	42980327	42980440	(40277001)	+	L2a	LINE/L2	3314	3421	(5)	1616804
13	22.1	0.0	0.0	chr17	42980635	42980666	(40276775)	+	GA-rich	Low_complexity	1	32	(0)	1616805
20	22.3	3.5	0.0	chr17	43022172	43022228	(40235213)	+	(GGC)n	Simple_repeat	1	59	(0)	1616898
14	7.8	0.0	6.5	chr17	43022419	43022449	(40234992)	+	(GGGCG)n	Simple_repeat	1	31	(0)	1616899
32	0.0	0.0	0.0	chr17	43124748	43124777	(40132664)	+	(TTTTG)n	Simple_repeat	1	30	(0)	1617143
1660	4.5	5.2	0.0	chr17	43124782	43124980	(40132461)	C	AluSx	SINE/Alu	(37)	275	66	1617144
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
436	26.4	9.8	0.1	chr17	44201186	44201342	(39056099)	+	MIR	SINE/MIR	98	268	(0)	1619435
212	32.6	5.8	2.0	chr17	44502038	44502137	(38755304)	C	X5B_LINE	LINE/CR1	(57)	128	25	1620072
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
405	31.3	13.8	0.6	chr17	44901174	44901389	(38356052)	+	MIRb	SINE/MIR	11	260	(8)	1620957
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
515	20.4	12.0	5.8	chr17	45151665	45151820	(38105621)	+	Charlie4z	DNA/hAT-Charlie	1	167	(0)	1621437
214	35.4	1.2	0.0	chr17	45319594	45319672	(37937769)	C	AmnSINE2	SINE/tRNA-Deu	(3)	355	276	1621785
1082	16.9	2.3	5.3	chr17	45319821	45319886	(37937555)	C	MER20	DNA/hAT-Charlie	(0)	219	161	1621786
545	19.3	7.7	0.3	chr17	45320728	45320877	(37936564)	C	MIRb	SINE/MIR	(100)	168	4	1621789
13	0.0	5.0	0.0	chr17	45334348	45334367	(37923074)	+	(TCC)n	Simple_repeat	1	21	(0)	1621828
387	23.1	11.5	9.6	chr17	45334410	45334596	(37922845)	C	L2b	LINE/L2	(0)	3387	3197	1621829
1978	21.9	8.7	0.0	chr17	45334645	45335055	(37922386)	C	LTR16A	LTR/ERVL	(1)	450	1	1621830
249	34.5	5.6	1.8	chr17	45345630	45345800	(37911641)	C	MamRep434	DNA/TcMar-Tigger	(99)	327	150	1621862
50	0.0	0.0	0.0	chr17	45895049	45895091	(37362350)	+	(GT)n	Simple_repeat	1	43	(0)	1622997
2305	7.2	0.0	2.9	chr17	46213276	46213288	(37044153)	C	AluY	SINE/Alu	(13)	298	286	1623590
28	0.0	0.0	0.0	chr17	46213289	46213314	(37044127)	+	(TTG)n	Simple_repeat	1	26	(0)	1623591
12	24.1	0.0	2.4	chr17	46979203	46979243	(36278198)	+	(GGAGCA)n	Simple_repeat	1	41	(0)	1625086
14	19.5	0.0	6.4	chr17	46979291	46979337	(36278104)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1625087
218	30.9	0.0	1.4	chr17	47277263	47277331	(35980110)	+	MER5B	DNA/hAT-Charlie	29	96	(82)	1625713
270	16.4	13.1	5.2	chr17	47649051	47649127	(35608314)	+	MIR3	SINE/MIR	39	122	(86)	1626486
394	27.1	1.6	0.0	chr17	47649133	47649257	(35608184)	+	MIR3	SINE/MIR	61	182	(26)	1626487
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
245	34.1	7.4	0.0	chr17	47707472	47707559	(35549882)	C	L2b	LINE/L2	(18)	3357	3263	1626591
16	15.2	0.0	7.8	chr17	47821812	47821862	(35435579)	+	(CTCCCCT)n	Simple_repeat	1	51	(0)	1626785
375	26.4	6.5	1.5	chr17	47947102	47947232	(35310209)	+	MLT1O	LTR/ERVL-MaLR	73	210	(332)	1627000
15	14.9	2.6	2.5	chr17	48101118	48101156	(35156285)	+	G-rich	Low_complexity	1	40	(0)	1627294
2309	10.0	0.7	0.0	chr17	48101669	48101969	(35155472)	+	AluSx1	SINE/Alu	1	303	(9)	1627296
371	29.0	15.0	0.0	chr17	48246554	48246701	(35010740)	C	MIR3	SINE/MIR	(11)	197	27	1627528
50	2.2	0.0	0.0	chr17	48252714	48252760	(35004681)	+	(GT)n	Simple_repeat	1	47	(0)	1627538
795	9.4	7.4	0.0	chr17	48361000	48361066	(34896375)	+	L1MB7	LINE/L1	6024	6092	(92)	1627697
61	1.7	0.0	0.0	chr17	48361067	48361125	(34896316)	+	(TACTA)n	Simple_repeat	1	59	(0)	1627698
21	14.5	0.0	0.0	chr17	48575671	48575708	(34681733)	+	(AAT)n	Simple_repeat	1	38	(0)	1628110
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
1060	16.9	0.0	2.7	chr17	48893712	48893894	(34363547)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	1628751
2269	11.6	0.0	0.0	chr17	48967770	48968072	(34289369)	+	AluSz	SINE/Alu	1	303	(9)	1628942
1838	19.3	0.3	0.3	chr17	48968092	48968391	(34289050)	C	AluJb	SINE/Alu	(11)	301	2	1628943
19	0.0	0.0	0.0	chr17	48997363	48997383	(34260058)	+	(T)n	Simple_repeat	1	21	(0)	1629009
49	0.0	2.0	2.0	chr17	48999924	48999973	(34257468)	+	(GT)n	Simple_repeat	1	51	(0)	1629011
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
13	12.0	3.7	0.0	chr17	49361350	49361376	(33896065)	+	GA-rich	Low_complexity	1	28	(0)	1629783
1246	10.1	2.2	1.7	chr17	49368209	49368387	(33889054)	+	AluSq	SINE/Alu	106	285	(28)	1629798
51	0.0	0.0	0.0	chr17	49368390	49368435	(33889006)	+	(ATAA)n	Simple_repeat	1	46	(0)	1629799
18	6.3	0.0	7.7	chr17	49576728	49576766	(33680675)	+	(TCCC)n	Simple_repeat	1	39	(0)	1630190
821	26.3	4.7	6.9	chr17	49976779	49977039	(33280402)	+	MIRb	SINE/MIR	3	257	(11)	1630918
214	27.3	1.5	1.5	chr17	50099893	50099959	(33157482)	+	L3b	LINE/CR1	4973	5039	(193)	1631158
368	27.8	1.8	0.0	chr17	50151465	50151572	(33105869)	+	MER5A	DNA/hAT-Charlie	34	143	(46)	1631243
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
1565	18.3	0.3	6.6	chr17	50507492	50507621	(32749820)	C	AluJr	SINE/Alu	(180)	132	2	1631940
406	32.6	4.5	11.5	chr17	50507622	50507722	(32749719)	C	MIRb	SINE/MIR	(131)	137	34	1631938
12	20.4	0.0	0.0	chr17	50618537	50618565	(32638876)	+	(CCT)n	Simple_repeat	1	29	(0)	1632120
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
17	18.8	0.0	10.7	chr17	51120903	51120977	(32136464)	+	G-rich	Low_complexity	1	75	(0)	1633162
489	25.6	12.2	3.4	chr17	51121167	51121344	(32136097)	C	MIRc	SINE/MIR	(18)	250	55	1633163
410	26.1	35.9	3.5	chr17	51152991	51153250	(32104191)	+	L2a	LINE/L2	3069	3416	(10)	1633248
657	32.6	2.8	0.4	chr17	55495155	55495397	(27762044)	C	Chap1_Mam	DNA/hAT-Charlie	(93)	249	1	1639745
1337	15.5	5.3	6.9	chr17	55495508	55495797	(27761644)	+	AluJo	SINE/Alu	1	285	(27)	1639746
990	18.6	0.0	0.0	chr17	57052294	57052449	(26204992)	+	FRAM	SINE/Alu	1	156	(20)	1642534
824	18.7	3.1	6.0	chr17	57052450	57052598	(26204843)	+	L1MB4	LINE/L1	5988	6141	(39)	1642535
2093	12.7	2.0	0.0	chr17	57052599	57052890	(26204551)	+	AluSx	SINE/Alu	1	298	(14)	1642536
14	13.7	3.1	0.0	chr17	57102232	57102263	(26155178)	+	(TTTGTT)n	Simple_repeat	1	33	(0)	1642654
1982	10.5	2.7	3.0	chr17	57102476	57102771	(26154670)	C	AluSc8	SINE/Alu	(16)	295	1	1642655
30	26.3	1.1	1.7	chr17	57256433	57256521	(26000920)	+	G-rich	Low_complexity	1	88	(0)	1642979
312	30.9	9.7	2.6	chr17	57441073	57441225	(25816216)	C	MamSINE1	SINE/tRNA-RTE	(9)	281	117	1643279
369	25.4	6.7	0.8	chr17	57570043	57570169	(25687272)	+	L1ME4a	LINE/L1	5776	5910	(214)	1643476
719	22.0	0.1	1.1	chr17	57570171	57570334	(25687107)	+	MER5B	DNA/hAT-Charlie	22	171	(7)	1643477
18	16.6	8.3	0.0	chr17	57586348	57586395	(25671046)	+	(TC)n	Simple_repeat	1	52	(0)	1643500
250	27.1	14.6	4.1	chr17	57835638	57835833	(25421608)	C	MIRc	SINE/MIR	(35)	233	14	1643933
679	18.1	14.4	0.0	chr17	57859248	57859396	(25398045)	+	MER5B	DNA/hAT-Charlie	5	178	(0)	1643990
912	19.6	1.2	0.6	chr17	57859405	57859568	(25397873)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	1643991
814	19.6	11.4	0.0	chr17	57859580	57859742	(25397699)	C	MER5A	DNA/hAT-Charlie	(2)	187	4	1643992
519	29.3	6.3	1.4	chr17	57990824	57991027	(25266414)	+	MIRb	SINE/MIR	44	259	(3)	1644236
210	35.4	9.9	0.8	chr17	58219485	58219612	(25037829)	C	MIR1_Amn	SINE/MIR	(87)	143	3	1644658
1614	20.2	12.7	3.1	chr17	58314274	58314722	(24942719)	+	MLT1D	LTR/ERVL-MaLR	1	498	(7)	1644810
372	37.8	13.0	1.6	chr17	58388840	58389466	(24867975)	C	L2	LINE/L2	(351)	3068	2360	1644917
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
269	32.1	1.2	5.6	chr17	58668789	58668877	(24588564)	C	Charlie17b	DNA/hAT-Charlie	(1081)	123	39	1645479
2357	10.3	0.0	0.0	chr17	58669071	58669372	(24588069)	+	AluSx	SINE/Alu	2	303	(9)	1645480
1932	13.0	4.1	4.7	chr17	58671946	58672285	(24585156)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	1645486
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
57	0.0	0.0	0.0	chr17	58822327	58822377	(24435064)	+	(TTTA)n	Simple_repeat	1	51	(0)	1645855
1588	22.9	2.5	2.0	chr17	58914171	58914566	(24342875)	C	L1MD3	LINE/L1	(70)	7925	7528	1646019
285	22.2	10.9	4.3	chr17	58914549	58914642	(24342799)	+	L1MD3	LINE/L1	7309	7409	(586)	1646019
434	13.3	3.6	3.7	chr17	58914623	58914713	(24342728)	+	L1MD3	LINE/L1	7429	7507	(488)	1646021
595	24.8	14.8	1.7	chr17	59347981	59348213	(23909228)	C	MIRb	SINE/MIR	(0)	268	7	1647057
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
299	26.7	0.0	3.9	chr17	60635747	60635824	(22621617)	C	L1ME3Cz	LINE/L1	(639)	358	284	1649713
1385	21.8	10.6	0.3	chr17	60635825	60636155	(22621286)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	180	1649716
578	15.5	17.8	0.0	chr17	61224704	61224911	(22032530)	C	MER3	DNA/hAT-Charlie	(74)	250	1	1650700
525	22.3	0.0	1.0	chr17	61511473	61511576	(21745865)	C	MER131	DNA?	(79)	136	34	1651166
426	26.8	0.0	4.5	chr17	62109886	62110018	(21147423)	C	MIRb	SINE/MIR	(21)	247	121	1652282
2253	8.5	0.3	0.0	chr17	62730614	62730891	(20526550)	+	AluSg4	SINE/Alu	1	279	(31)	1653595
34	2.9	0.0	0.0	chr17	62730892	62730927	(20526514)	+	(CAA)n	Simple_repeat	1	36	(0)	1653596
490	33.9	2.8	8.1	chr17	62730932	62731030	(20526411)	C	MIRb	SINE/MIR	(165)	103	20	1653594
345	32.8	5.6	6.8	chr17	62731046	62731264	(20526177)	+	L1M5	LINE/L1	5040	5255	(891)	1653597
413	32.4	10.1	7.4	chr17	62802118	62802221	(20455220)	C	L2b	LINE/L2	(0)	3375	3269	1653710
14	7.0	0.0	10.5	chr17	63826976	63827013	(19430428)	+	(TTCCAC)n	Simple_repeat	1	38	(0)	1655423
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
300	22.4	2.9	0.0	chr17	64217076	64217142	(19040299)	+	MIR3	SINE/MIR	113	181	(27)	1656097
1196	16.4	6.5	0.0	chr17	64686751	64686951	(18570490)	C	MER58A	DNA/hAT-Charlie	(9)	215	1	1657090
238	25.8	8.8	0.0	chr17	64687092	64687153	(18570288)	C	MIRb	SINE/MIR	(6)	262	195	1657091
2314	8.1	0.3	1.7	chr17	66502661	66502957	(16754484)	C	AluY	SINE/Alu	(17)	294	2	1660372
385	31.4	12.1	0.6	chr17	66509020	66509134	(16748307)	C	MLT1H2	LTR/ERVL-MaLR	(290)	199	63	1660382
2577	18.6	5.4	3.5	chr17	66509135	66509163	(16748278)	C	MLT2B4	LTR/ERVL	(0)	556	528	1660383
49	2.2	0.0	0.0	chr17	66509164	66509209	(16748232)	+	(GT)n	Simple_repeat	1	46	(0)	1660384
2577	18.6	5.4	3.5	chr17	66509210	66509724	(16747717)	C	MLT2B4	LTR/ERVL	(29)	527	2	1660383
259	35.4	8.6	6.2	chr17	66570799	66571024	(16686417)	+	MIRc	SINE/MIR	4	235	(33)	1660474
1145	21.2	1.3	1.7	chr17	66581197	66581436	(16676005)	C	MER58B	DNA/hAT-Charlie	(9)	332	94	1660495
261	25.6	13.1	0.0	chr17	67520569	67520654	(15736787)	+	L2b	LINE/L2	3276	3374	(1)	1662221
13	4.5	4.3	0.0	chr17	67671680	67671702	(15585739)	+	(CCAG)n	Simple_repeat	1	24	(0)	1662526
968	12.1	0.0	2.1	chr17	67829338	67829481	(15427960)	C	L1PA8A	LINE/L1	(0)	6131	5991	1662909
212	18.2	9.8	1.8	chr17	70661547	70661602	(12595839)	C	UCON132b	DNA/hAT-Tip100	(22)	126	66	1667634
14	23.2	0.0	0.0	chr17	72432839	72432874	(10824567)	+	(TTTC)n	Simple_repeat	1	36	(0)	1670378
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
659	26.5	7.3	6.0	chr17	73480837	73481206	(9776235)	+	LTR85c	LTR/Gypsy?	235	725	(98)	1672407
1352	28.2	19.5	1.8	chr17	73608859	73609675	(9647766)	C	L2a	LINE/L2	(682)	2737	1742	1672641
530	28.9	7.7	0.4	chr17	74062603	74062831	(9194610)	C	MIR	SINE/MIR	(15)	247	1	1673427
204	26.5	1.4	2.9	chr17	74063099	74063168	(9194273)	C	MIRb	SINE/MIR	(173)	95	27	1673425
642	0.0	0.0	0.0	chr17	75033906	75033978	(8223463)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1675212
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
1942	7.1	0.7	4.8	chr17	75035539	75035832	(8221609)	+	AluSx3	SINE/Alu	1	282	(29)	1675216
194	30.8	11.7	1.1	chr17	75262043	75262134	(7995307)	+	MIRc	SINE/MIR	3	105	(163)	1675711
2048	11.1	0.3	3.9	chr17	75368216	75368521	(7888920)	C	AluSg4	SINE/Alu	(14)	296	2	1675965
682	22.7	6.8	6.8	chr17	75552494	75552708	(7704733)	C	Charlie5	DNA/hAT-Charlie	(106)	2518	2293	1676351
276	13.6	0.0	0.0	chr17	75552749	75552792	(7704649)	C	Charlie5	DNA/hAT-Charlie	(336)	2288	2245	1676351
272	26.0	0.0	3.8	chr17	75552798	75552877	(7704564)	C	MER3	DNA/hAT-Charlie	(86)	123	47	1676354
973	16.1	4.7	0.0	chr17	76465853	76466014	(6791427)	C	AluJb	SINE/Alu	(7)	305	136	1678089
1971	11.2	4.5	2.4	chr17	76586603	76586930	(6670511)	C	MER1B	DNA/hAT-Charlie	(4)	335	1	1678332
461	28.0	3.6	2.6	chr17	76668129	76668319	(6589122)	+	LTR16A	LTR/ERVL	258	450	(1)	1678516
2113	11.5	3.3	0.3	chr17	76668369	76668663	(6588778)	+	AluSz	SINE/Alu	2	305	(7)	1678517
4031	15.2	3.7	8.6	chr17	76669935	76670426	(6587015)	C	L1MB8	LINE/L1	(438)	5740	5278	1678520
242	29.9	1.3	0.0	chr17	76969746	76969822	(6287619)	C	Tigger4	DNA/TcMar-Tigger	(620)	2111	2034	1679133
53	0.0	0.0	0.0	chr17	78254749	78254793	(5002648)	+	(GT)n	Simple_repeat	1	45	(0)	1681498
2141	8.3	0.0	3.5	chr17	78254794	78255082	(5002359)	C	AluSx	SINE/Alu	(33)	279	1	1681499
336	9.5	0.0	0.0	chr17	78563525	78563566	(4693875)	+	AluJo	SINE/Alu	18	59	(253)	1682042
1682	18.1	7.0	0.0	chr17	78737136	78737455	(4519986)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	1682348
237	36.3	2.9	5.6	chr17	79074490	79074632	(4182809)	+	MIR3	SINE/MIR	34	172	(36)	1682966
20	12.7	0.0	6.1	chr17	79074731	79074784	(4182657)	+	(CGCCC)n	Simple_repeat	1	50	(0)	1682967
15	14.4	0.0	0.0	chr17	79778793	79778816	(3478625)	+	(T)n	Simple_repeat	1	24	(0)	1683940
289	28.4	0.0	0.0	chr17	80201305	80201385	(3056056)	+	MER20	DNA/hAT-Charlie	100	180	(39)	1684652
18	0.0	3.9	0.0	chr17	80201438	80201463	(3055978)	+	(TTCTT)n	Simple_repeat	1	27	(0)	1684653
2413	9.4	0.0	0.7	chr17	80202986	80203294	(3054147)	+	AluSx1	SINE/Alu	1	307	(5)	1684656
267	24.8	3.8	1.0	chr17	80203420	80203521	(3053920)	C	MER5A1	DNA/hAT-Charlie	(61)	105	1	1684657
13	21.2	2.6	0.0	chr17	80219745	80219782	(3037659)	+	G-rich	Low_complexity	1	39	(0)	1684679
49	0.0	0.0	0.0	chr17	80988885	80988926	(2268515)	+	(GT)n	Simple_repeat	1	42	(0)	1685747
541	24.4	1.0	14.5	chr17	80988927	80989032	(2268409)	C	MER58C	DNA/hAT-Charlie	(111)	104	1	1685745
13	20.5	0.0	2.8	chr17	81346367	81346402	(1911039)	+	G-rich	Low_complexity	1	36	(0)	1686143
21	8.9	0.0	2.6	chr17	81695339	81695376	(1562065)	+	(CTGCC)n	Simple_repeat	1	38	(0)	1686651
181	32.5	6.0	4.8	chr17	81695520	81695684	(1561757)	+	MIR3	SINE/MIR	1	167	(41)	1686652
1846	11.1	7.6	0.7	chr17	81723156	81723435	(1534006)	+	AluSq	SINE/Alu	2	302	(11)	1686696
552	18.2	2.4	0.8	chr17	81723436	81723557	(1533884)	+	L1M4	LINE/L1	5163	5286	(860)	1686695
1299	22.7	4.1	0.3	chr17	81723588	81723919	(1533522)	+	L1M4	LINE/L1	5353	5697	(477)	1686695
13	15.8	2.7	2.6	chr17	81926849	81926885	(1330556)	+	(CCACCTC)n	Simple_repeat	1	38	(0)	1686914
2051	10.7	0.3	5.2	chr17	82336270	82336579	(920862)	C	AluSx	SINE/Alu	(11)	301	7	1687497
664	0.0	0.0	0.0	chr17	82494721	82494792	(762649)	C	tRNA-Met-i	tRNA	(3)	72	1	1687730
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
29	18.7	0.0	4.1	chr17	82648451	82648523	(608918)	+	(CGTG)n	Simple_repeat	1	73	(0)	1688030
156	18.1	1.6	0.6	chr17	82648573	82648887	(608554)	+	G-rich	Low_complexity	1	320	(0)	1688031
21	11.7	0.0	2.6	chr18	812001	812039	(79561246)	+	(GCG)n	Simple_repeat	1	39	(0)	1690507
15	19.5	6.5	3.0	chr18	812040	812055	(79561230)	+	G-rich	Low_complexity	18	66	(0)	1690508
17	22.5	0.0	0.0	chr18	812316	812351	(79560934)	+	(C)n	Simple_repeat	1	36	(0)	1690509
345	25.0	4.9	1.7	chr18	2657234	2657351	(77715934)	+	L2a	LINE/L2	3304	3425	(1)	1693039
346	28.8	7.0	2.4	chr18	2658091	2658254	(77715031)	C	L1ME4c	LINE/L1	(381)	449	278	1693042
299	15.8	6.6	0.0	chr18	3261648	3261704	(77111581)	C	MER53	DNA/hAT	(130)	63	3	1694047
2736	29.8	2.7	2.8	chr18	3296459	3297771	(77075514)	+	L1PB3	LINE/L1	3	1313	(5550)	1694111
14	12.6	0.0	7.5	chr18	3448257	3448296	(76924989)	+	(CCTCCTC)n	Simple_repeat	1	40	(0)	1694436
23	15.5	6.0	0.0	chr18	5296223	5296272	(75077013)	+	(GC)n	Simple_repeat	1	53	(0)	1697045
913	27.8	7.9	5.1	chr18	5463305	5463872	(74909413)	+	MLT1E3	LTR/ERVL-MaLR	1	585	(39)	1697270
447	32.5	8.0	3.0	chr18	5900465	5900797	(74472488)	C	L2a	LINE/L2	(2)	3424	3074	1697840
369	20.8	2.9	2.9	chr18	6352591	6352694	(74020591)	+	MLT1N2	LTR/ERVL-MaLR	66	169	(393)	1698432
16	21.3	0.0	0.0	chr18	6729186	6729218	(73644067)	+	A-rich	Low_complexity	1	33	(0)	1698976
90	32.7	0.0	0.7	chr18	6729310	6729597	(73643688)	+	(AC)n	Simple_repeat	1	288	(0)	1698977
24	3.6	0.0	0.0	chr18	6731285	6731313	(73641972)	+	(TG)n	Simple_repeat	1	29	(0)	1698978
2836	24.0	7.6	1.9	chr18	6807216	6808112	(73565173)	C	L1MEc	LINE/L1	(5409)	991	40	1699080
250	26.1	0.0	2.2	chr18	6808110	6808199	(73565086)	C	L1MEc	LINE/L1	(5104)	1311	1224	1699088
707	32.5	8.7	1.3	chr18	6808214	6808606	(73564679)	C	L1MEc	LINE/L1	(5295)	1105	681	1699088
209	27.7	0.0	4.6	chr18	7766993	7767079	(72606206)	+	MIRb	SINE/MIR	178	260	(8)	1700549
236	27.9	5.5	0.0	chr18	7767092	7767177	(72606108)	+	L4_A_Mam	LINE/RTE-X	2852	2942	(2048)	1700551
405	27.3	7.9	0.8	chr18	9608237	9608365	(70764920)	C	MIRc	SINE/MIR	(123)	145	7	1703326
2327	9.8	0.0	0.0	chr18	9701493	9701789	(70671496)	C	AluSx1	SINE/Alu	(15)	297	1	1703527
5374	7.7	3.7	0.6	chr18	9868372	9868701	(70504584)	C	L1PA8	LINE/L1	(396)	5776	5422	1703774
3282	11.8	5.8	1.0	chr18	9877166	9877678	(70495607)	+	LTR45C	LTR/ERV1	1	539	(0)	1703791
13	17.4	7.1	3.3	chr18	9913872	9913927	(70459358)	+	(GCGCAGC)n	Simple_repeat	1	60	(0)	1703863
15	20.9	1.6	6.3	chr18	9914178	9914239	(70459046)	+	(GCCGCC)n	Simple_repeat	1	63	(0)	1703864
13	12.8	5.6	2.6	chr18	12520553	12520588	(67852697)	+	A-rich	Low_complexity	1	38	(0)	1707594
180	31.7	4.7	0.0	chr18	12946944	12947044	(67426241)	+	L2	LINE/L2	307	412	(3007)	1708432
1027	18.7	9.5	4.5	chr18	21668944	21669211	(58704074)	+	AluJo	SINE/Alu	4	286	(26)	1713066
428	26.6	1.7	5.0	chr18	22485811	22485929	(57887356)	C	L2c	LINE/L2	(0)	3387	3273	1714625
49	4.1	0.0	0.0	chr18	22493298	22493348	(57879937)	+	(AC)n	Simple_repeat	1	51	(0)	1714640
312	34.3	11.6	3.1	chr18	22623800	22624217	(57749068)	+	Plat_L3	LINE/CR1	3125	3582	(4)	1714795
382	28.2	17.1	1.2	chr18	22923497	22923668	(57449617)	C	MIRc	SINE/MIR	(51)	217	13	1715219
348	27.3	8.3	9.0	chr18	23154453	23154597	(57218688)	+	MIRb	SINE/MIR	110	253	(15)	1715720
24	9.9	0.0	4.3	chr18	23586972	23587018	(56786267)	+	(GGCGG)n	Simple_repeat	1	47	(0)	1716473
532	23.6	1.4	3.4	chr18	23784879	23785027	(56588258)	C	LTR67B	LTR/ERVL	(2)	618	473	1716864
2097	9.6	0.0	1.1	chr18	24076010	24076279	(56297006)	C	AluSx1	SINE/Alu	(45)	267	1	1717310
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
1287	27.7	7.6	4.2	chr18	25503363	25503935	(54869350)	C	MLT2F	LTR/ERVL	(69)	594	1	1719422
18	0.0	0.0	0.0	chr18	26508710	26508729	(53864556)	+	(TC)n	Simple_repeat	1	20	(0)	1721033
18	4.2	4.0	0.0	chr18	26508729	26508753	(53864532)	+	(CA)n	Simple_repeat	1	26	(0)	1721034
202	30.2	0.0	0.0	chr18	26509028	26509080	(53864205)	C	L2b	LINE/L2	(1)	3374	3322	1721035
233	25.3	9.2	1.2	chr18	26511602	26511681	(53861604)	C	MIRb	SINE/MIR	(103)	165	79	1721039
207	29.3	6.0	7.3	chr18	27983485	27983635	(52389650)	C	MIRc	SINE/MIR	(99)	169	21	1723159
322	30.4	9.4	0.0	chr18	27983888	27984012	(52389273)	C	X6B_LINE	LINE/CR1	(0)	1072	935	1723160
491	33.7	2.9	2.5	chr18	31011333	31011536	(49361749)	+	L3	LINE/CR1	1655	1859	(2240)	1727089
1552	9.1	0.5	1.0	chr18	31011712	31011909	(49361376)	+	AluSx3	SINE/Alu	2	198	(113)	1727090
358	31.1	16.3	1.0	chr18	31658691	31658882	(48714403)	+	MIRb	SINE/MIR	34	260	(8)	1728012
6401	6.3	2.5	0.1	chr18	31670758	31671665	(48701620)	C	L1PA7	LINE/L1	(2)	6152	5225	1728028
13	20.1	5.0	0.0	chr18	31942839	31942878	(48430407)	+	(CCGGC)n	Simple_repeat	1	42	(0)	1728479
232	25.4	1.6	0.0	chr18	31954318	31954380	(48418905)	C	MLT1K	LTR/ERVL-MaLR	(344)	168	105	1728503
253	24.0	16.7	0.0	chr18	32455925	32456024	(47917261)	+	L1ME4a	LINE/L1	4888	5007	(1139)	1729371
1972	19.6	6.4	7.5	chr18	32921318	32921873	(47451412)	C	MER44B	DNA/TcMar-Tigger	(1)	549	1	1730073
363	27.8	11.1	7.4	chr18	33804449	33804638	(46568647)	+	MIR	SINE/MIR	54	251	(11)	1731151
1292	23.3	3.9	0.7	chr18	34115500	34115874	(46257411)	+	LTR9A1	LTR/ERV1	263	779	(0)	1731532
482	30.9	9.3	5.9	chr18	34117108	34117344	(46255941)	C	MIR	SINE/MIR	(12)	250	5	1731534
268	18.6	10.7	0.2	chr18	35616847	35616926	(44756359)	+	MIR	SINE/MIR	107	199	(69)	1733591
103	20.9	3.0	1.8	chr18	37565666	37565932	(42807353)	+	(TC)n	Simple_repeat	1	275	(0)	1736226
3057	27.0	6.0	2.5	chr18	39648164	39648526	(40724759)	C	L1ME1	LINE/L1	(5999)	401	37	1738987
15	11.1	0.0	3.2	chr18	43626737	43626767	(36746518)	+	(AAACA)n	Simple_repeat	1	31	(0)	1744439
233	36.4	5.7	1.5	chr18	43626808	43626941	(36746344)	C	MIR3	SINE/MIR	(2)	206	67	1744440
404	30.7	8.4	6.8	chr18	44946684	44946917	(35426368)	C	L2a	LINE/L2	(0)	3426	3189	1746185
42	0.0	0.0	0.0	chr18	45016732	45016767	(35356518)	+	(CA)n	Simple_repeat	1	36	(0)	1746280
12	13.9	0.0	8.1	chr18	45016777	45016813	(35356472)	+	(CACCC)n	Simple_repeat	1	37	(0)	1746281
12	11.1	3.2	3.1	chr18	45967194	45967224	(34406061)	+	(TGGCCT)n	Simple_repeat	1	32	(0)	1747710
16	23.3	0.0	0.0	chr18	46104101	46104135	(34269150)	+	A-rich	Low_complexity	1	35	(0)	1748004
19	12.8	0.0	0.0	chr18	47931271	47931304	(32441981)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1751016
22	10.1	0.0	0.0	chr18	48023476	48023507	(32349778)	+	(TG)n	Simple_repeat	1	32	(0)	1751192
443	28.9	8.2	1.5	chr18	48265393	48265596	(32107689)	+	MIR	SINE/MIR	30	248	(14)	1751587
48	0.0	0.0	0.0	chr18	48465290	48465333	(31907952)	+	(AAAT)n	Simple_repeat	1	44	(0)	1751965
190	29.4	0.0	0.0	chr18	48548009	48548059	(31825226)	C	MIR	SINE/MIR	(14)	248	198	1752089
17	16.3	2.3	2.3	chr18	48827986	48828031	(31545254)	+	(CCCACC)n	Simple_repeat	1	46	(0)	1752500
422	27.2	11.0	1.4	chr18	48873578	48873725	(31499560)	+	MIR1_Amn	SINE/MIR	14	172	(36)	1752571
48	0.0	0.0	0.0	chr18	48873738	48873781	(31499504)	+	(ATTT)n	Simple_repeat	1	44	(0)	1752572
2265	9.2	0.0	0.0	chr18	48873782	48874065	(31499220)	C	AluSq2	SINE/Alu	(29)	284	1	1752573
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
356	18.0	0.0	0.0	chr18	48998550	48998610	(31374675)	C	MER5B	DNA/hAT-Charlie	(0)	178	118	1752804
828	21.1	11.7	0.0	chr18	49487712	49487953	(30885332)	+	L1M4	LINE/L1	5496	5769	(415)	1753634
2282	7.8	0.0	0.4	chr18	49607577	49607882	(30765403)	C	AluY	SINE/Alu	(0)	311	2	1753884
1621	7.7	5.4	7.1	chr18	49607883	49608143	(30765142)	C	MER39B	LTR/ERV1	(393)	260	2	1753883
1266	14.8	0.4	7.1	chr18	49608147	49608415	(30764870)	+	L1MB7	LINE/L1	7346	7596	(1)	1753881
992	21.3	1.2	0.0	chr18	49618977	49619140	(30754145)	+	AluJo	SINE/Alu	137	302	(10)	1753913
495	31.8	1.1	2.3	chr18	49656425	49656509	(30716776)	+	MER102b	DNA/hAT-Charlie	5	91	(250)	1753982
1339	17.4	7.5	0.9	chr18	49656510	49656733	(30716552)	+	AluJb	SINE/Alu	11	250	(62)	1753983
482	32.8	3.9	7.6	chr18	49804212	49804303	(30568982)	C	L3	LINE/CR1	(194)	3905	3819	1754233
1002	28.2	2.4	8.5	chr18	50308145	50308543	(30064742)	+	LTR16A	LTR/ERVL	7	380	(71)	1754933
199	30.3	1.5	0.0	chr18	50562006	50562071	(29811214)	C	Tigger19b	DNA/TcMar-Tigger	(138)	412	346	1755338
210	28.8	11.0	5.0	chr18	50623130	50623278	(29750007)	C	MIR1_Amn	SINE/MIR	(23)	185	35	1755443
289	22.4	9.3	2.0	chr18	50631911	50632010	(29741275)	+	MIRc	SINE/MIR	161	268	(0)	1755457
12	10.2	2.7	7.9	chr18	50632507	50632543	(29740742)	+	(TTCTG)n	Simple_repeat	1	38	(0)	1755458
180	26.7	0.0	4.3	chr18	50632568	50632614	(29740671)	+	L2c	LINE/L2	3250	3294	(81)	1755459
2291	12.2	0.0	0.0	chr18	50632617	50632919	(29740366)	C	AluSx	SINE/Alu	(9)	303	1	1755460
253	29.6	3.0	0.0	chr18	50748446	50748543	(29624742)	C	LTR88b	LTR/Gypsy?	(733)	104	4	1755676
1757	15.4	0.4	1.8	chr18	50868805	50869084	(29504201)	+	AluJo	SINE/Alu	1	276	(36)	1755905
11	17.3	0.0	5.6	chr18	50878852	50878887	(29494398)	+	(CTCCAC)n	Simple_repeat	1	36	(0)	1755929
180	18.2	6.4	0.0	chr18	50879755	50879798	(29493487)	+	OldhAT1	DNA/hAT-Ac	2549	2595	(253)	1755930
297	30.4	9.1	7.1	chr18	54119783	54120051	(26253234)	+	LTR88c	LTR/Gypsy?	41	315	(547)	1760743
250	26.4	10.8	0.0	chr18	55505984	55506074	(24867211)	+	MIRc	SINE/MIR	48	149	(119)	1762758
762	23.4	0.6	0.6	chr18	58161827	58161994	(22211291)	C	MLT1J1	LTR/ERVL-MaLR	(262)	182	15	1766907
930	33.4	12.8	2.2	chr18	58239762	58240526	(22132759)	C	MamGypsy2-I	LTR/Gypsy	(681)	3485	2628	1767018
3818	12.8	4.8	7.5	chr18	58491108	58491818	(21881467)	+	LTR8	LTR/ERV1	1	691	(0)	1767335
2459	23.4	7.5	7.4	chr18	58635804	58636567	(21736718)	+	L1MB7	LINE/L1	5401	6174	(10)	1767575
251	30.9	3.5	5.1	chr18	59053375	59053551	(21319734)	C	L1ME4c	LINE/L1	(93)	737	564	1768360
902	28.3	4.2	0.5	chr18	59053555	59053848	(21319437)	C	L1ME4c	LINE/L1	(305)	525	256	1768361
1312	12.9	5.0	0.0	chr18	59054756	59054964	(21318321)	C	MLT1B	LTR/ERVL-MaLR	(170)	220	1	1768364
1344	28.3	13.9	2.5	chr18	59637477	59638402	(20734883)	+	L1ME3D	LINE/L1	3114	4136	(2010)	1769241
1099	16.6	1.6	1.1	chr18	59638403	59638585	(20734700)	+	MER5A	DNA/hAT-Charlie	5	188	(1)	1769243
764	32.4	11.7	2.9	chr18	62420406	62421100	(17952185)	C	L3	LINE/CR1	(1062)	3037	2274	1773426
373	16.9	6.7	2.4	chr18	62710541	62710625	(17662660)	C	MER135	DNA	(64)	164	76	1773926
237	34.5	8.2	4.3	chr18	62880941	62881034	(17492251)	+	L2b	LINE/L2	3274	3371	(4)	1774218
13	28.1	0.0	4.9	chr18	63422145	63422205	(16951080)	+	(CTTCTCC)n	Simple_repeat	1	61	(0)	1775046
17844	15.0	6.4	4.8	chr18	63730597	63733505	(16639780)	+	L1MA2	LINE/L1	118	3087	(4478)	1775528
413	22.2	8.3	7.1	chr18	65906494	65906648	(14466637)	C	MER67C	LTR/ERV1	(0)	514	358	1778421
1796	15.9	3.7	3.0	chr18	65906660	65907060	(14466225)	C	MER67C	LTR/ERV1	(306)	405	2	1778421
188	33.0	2.0	6.5	chr18	69846202	69846308	(10526977)	C	MIR3	SINE/MIR	(20)	188	87	1783749
799	17.7	4.3	1.9	chr18	79678792	79678949	(694336)	C	AluJo	SINE/Alu	(121)	191	30	1795686
474	28.4	7.3	5.0	chr18	79965675	79965915	(407370)	C	L1MB7	LINE/L1	(1072)	5074	4828	1795944
1305	24.0	13.0	1.7	chr18	80115191	80115605	(257680)	C	L1MC4	LINE/L1	(1045)	6997	6529	1796155
32	0.0	0.0	0.0	chr19	267223	267252	(58350364)	+	(CGCTG)n	Simple_repeat	1	30	(0)	1796658
20	18.5	0.0	0.0	chr19	1000449	1000491	(57617125)	+	G-rich	Low_complexity	1	43	(0)	1798054
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
12	13.9	6.2	0.0	chr19	1249461	1249492	(57368124)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1798466
24	14.8	1.9	1.8	chr19	1275563	1275616	(57342000)	+	(TGCTGC)n	Simple_repeat	1	55	(0)	1798487
19	26.3	3.7	2.4	chr19	1652614	1652694	(56964922)	+	(CCGCG)n	Simple_repeat	1	84	(0)	1799198
217	14.6	0.0	2.5	chr19	1862606	1862652	(56754964)	C	MIR3	SINE/MIR	(59)	149	104	1799635
23	24.6	2.7	2.6	chr19	1905578	1905652	(56711964)	+	(CG)n	Simple_repeat	1	77	(0)	1799732
1680	15.0	3.5	1.1	chr19	1939742	1940021	(56677595)	C	AluJb	SINE/Alu	(25)	287	1	1799808
235	32.5	6.6	3.4	chr19	1940058	1940175	(56677441)	+	L2c	LINE/L2	3263	3384	(3)	1799809
13	14.0	4.7	4.4	chr19	1940696	1940738	(56676878)	+	(CGCCGC)n	Simple_repeat	1	45	(0)	1799810
208	42.9	1.6	0.0	chr19	2149113	2149231	(56468385)	C	MIR1_Amn	SINE/MIR	(66)	164	44	1800221
280	19.4	4.6	0.0	chr19	2165690	2165751	(56451865)	C	HY1	scRNA	(54)	65	1	1800277
1717	16.0	6.3	0.4	chr19	2385587	2385867	(56231749)	+	AluJb	SINE/Alu	1	299	(13)	1800675
203	22.0	0.0	2.0	chr19	2457086	2457136	(56160480)	+	MIR	SINE/MIR	24	73	(189)	1800829
256	10.8	1.5	13.3	chr19	2457203	2457230	(56160386)	+	L1MB7	LINE/L1	5879	5902	(282)	1800830
1858	11.9	7.5	2.7	chr19	2457231	2457523	(56160093)	+	AluSz	SINE/Alu	1	308	(4)	1800831
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
400	29.0	4.2	4.0	chr19	2507173	2507369	(56110247)	+	MIRc	SINE/MIR	22	207	(61)	1800969
181	26.8	0.0	0.0	chr19	2529887	2529927	(56087689)	+	MIR3	SINE/MIR	111	151	(57)	1801023
252	21.3	0.0	4.7	chr19	3009217	3009280	(55608336)	+	MER58A	DNA/hAT-Charlie	1	61	(163)	1802158
314	32.1	4.2	4.2	chr19	3009284	3009449	(55608167)	C	L3	LINE/CR1	(553)	3546	3381	1802159
24	16.1	6.5	0.0	chr19	3185963	3186024	(55431592)	+	(CCG)n	Simple_repeat	1	66	(0)	1802594
739	23.9	1.4	12.4	chr19	3262329	3262423	(55355193)	+	MER3	DNA/hAT-Charlie	129	208	(1)	1802779
2112	10.9	3.9	1.6	chr19	3262669	3262971	(55354645)	+	AluSx	SINE/Alu	1	310	(2)	1802781
13	32.3	0.0	1.7	chr19	3721714	3721772	(54895844)	+	GA-rich	Low_complexity	1	59	(0)	1803877
481	18.8	7.9	0.8	chr19	3990360	3990477	(54627139)	C	MLT1J	LTR/ERVL-MaLR	(319)	193	67	1804488
31	21.4	0.0	4.4	chr19	3990478	3990494	(54627122)	+	(TCTTTTT)n	Simple_repeat	1	17	(0)	1804489
2439	8.9	0.0	0.3	chr19	3990495	3990808	(54626808)	C	AluSq	SINE/Alu	(0)	313	1	1804490
17	20.4	2.2	0.0	chr19	4007891	4007935	(54609681)	+	(CCGGCCC)n	Simple_repeat	1	46	(0)	1804554
23	26.0	1.3	1.3	chr19	4400558	4400634	(54216982)	+	(CGCCCG)n	Simple_repeat	1	77	(0)	1805510
416	27.5	10.6	5.2	chr19	4401751	4402087	(54215529)	C	L2b	LINE/L2	(0)	3387	3029	1805515
2121	6.7	2.5	3.2	chr19	4465728	4466010	(54151606)	+	AluY	SINE/Alu	2	282	(29)	1805647
33	0.0	0.0	0.0	chr19	4466011	4466041	(54151575)	+	(AAAT)n	Simple_repeat	1	31	(0)	1805648
322	20.9	0.0	8.1	chr19	4466043	4466076	(54151540)	+	MER53	DNA/hAT	103	135	(58)	1805649
658	23.9	0.0	0.8	chr19	4466077	4466206	(54151410)	+	FLAM_C	SINE/Alu	2	130	(13)	1805650
322	20.9	0.0	8.1	chr19	4466207	4466270	(54151346)	+	MER53	DNA/hAT	136	193	(0)	1805649
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
255	23.2	8.2	5.9	chr19	5689265	5689383	(52928233)	C	MER113	DNA/hAT-Charlie	(348)	173	52	1808594
1198	10.4	0.0	0.0	chr19	5689474	5689627	(52927989)	C	AluSx	SINE/Alu	(22)	290	137	1808595
193	27.0	21.8	1.8	chr19	5695074	5695186	(52922430)	+	L2b	LINE/L2	3028	3169	(206)	1808599
490	29.2	8.2	2.0	chr19	5697248	5697544	(52920072)	C	L2a	LINE/L2	(187)	3239	2923	1808600
189	32.0	2.6	0.7	chr19	5697553	5697700	(52919916)	C	L2	LINE/L2	(439)	2980	2830	1808601
257	25.9	10.3	4.1	chr19	5718927	5719071	(52898545)	+	L2a	LINE/L2	3174	3328	(98)	1808640
336	28.1	2.6	6.6	chr19	5794157	5794207	(52823409)	C	MIRc	SINE/MIR	(129)	139	88	1808855
1633	16.1	3.3	2.7	chr19	5794352	5794649	(52822967)	+	AluJr	SINE/Alu	1	300	(12)	1808856
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
259	30.6	16.0	2.3	chr19	6394106	6394282	(52223334)	C	L2b	LINE/L2	(98)	3277	3072	1810129
12	5.9	10.3	4.7	chr19	6516896	6516934	(52100682)	+	(TCCCGCTC)n	Simple_repeat	1	43	(0)	1810457
638	21.0	0.0	2.4	chr19	6744015	6744138	(51873478)	C	FRAM	SINE/Alu	(2)	174	54	1811037
31	8.3	2.0	0.0	chr19	7197322	7197372	(51420244)	+	(GAGT)n	Simple_repeat	1	52	(0)	1812249
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
266	22.4	7.3	0.0	chr19	7257340	7257415	(51360201)	+	Charlie22a	DNA/hAT-Charlie	408	489	(2)	1812428
16	0.0	0.0	0.0	chr19	7257528	7257545	(51360071)	+	(A)n	Simple_repeat	1	18	(0)	1812429
22	30.0	2.2	1.1	chr19	7294260	7294288	(51323328)	+	G-rich	Low_complexity	1	54	(39)	1812537
14	14.7	0.0	7.0	chr19	7294289	7294331	(51323285)	+	(GGCGGCG)n	Simple_repeat	1	43	(0)	1812538
22	30.0	2.2	1.1	chr19	7294332	7294350	(51323266)	+	G-rich	Low_complexity	55	93	(0)	1812537
14	15.8	2.7	2.6	chr19	7294486	7294522	(51323094)	+	(CCGC)n	Simple_repeat	1	38	(0)	1812539
2037	6.6	0.0	1.2	chr19	7488518	7488775	(51128841)	+	AluSc8	SINE/Alu	1	255	(56)	1813041
297	29.2	0.0	3.2	chr19	8005998	8006113	(50611503)	+	MIRc	SINE/MIR	47	155	(53)	1814132
16	20.6	0.0	5.9	chr19	8367671	8367721	(50249895)	+	(CCTC)n	Simple_repeat	1	51	(0)	1815153
2110	6.8	4.5	0.4	chr19	11089873	11090150	(47527466)	C	AluSx1	SINE/Alu	(22)	290	1	1821402
14	19.8	0.0	4.5	chr19	11090388	11090431	(47527185)	+	(GCCCCC)n	Simple_repeat	1	44	(0)	1821403
16	15.5	2.8	0.0	chr19	11142628	11142663	(47474953)	+	G-rich	Low_complexity	1	37	(0)	1821558
236	26.9	0.0	0.0	chr19	11344712	11344763	(47272853)	+	MER91A	DNA/hAT-Tip100	1	52	(144)	1822104
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
1717	13.1	10.0	2.6	chr19	12035850	12036162	(46581454)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1823622
13	23.9	0.0	4.2	chr19	12696486	12696533	(45921083)	+	(GGTCTG)n	Simple_repeat	1	48	(0)	1825025
982	17.3	0.0	1.8	chr19	12696841	12697008	(45920608)	+	AluJr	SINE/Alu	137	301	(11)	1825026
38	8.5	0.0	0.0	chr19	12722562	12722612	(45895004)	+	(A)n	Simple_repeat	1	51	(0)	1825078
313	29.9	5.6	0.8	chr19	12733634	12733751	(45883865)	C	MIRb	SINE/MIR	(20)	248	125	1825105
370	28.2	2.6	0.9	chr19	12733766	12733876	(45883740)	+	L2a	LINE/L2	3312	3424	(2)	1825106
12	21.1	0.0	4.8	chr19	12790135	12790176	(45827440)	+	(GCTGGAG)n	Simple_repeat	1	42	(0)	1825217
28	14.9	0.0	0.0	chr19	12794411	12794455	(45823161)	+	(A)n	Simple_repeat	1	45	(0)	1825219
874	24.9	2.7	1.4	chr19	13082235	13082450	(45535166)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1825843
368	33.7	14.4	0.5	chr19	13117025	13117215	(45500401)	+	MIR	SINE/MIR	27	248	(14)	1825905
437	28.8	12.4	3.5	chr19	13117225	13117451	(45500165)	+	MIR	SINE/MIR	13	262	(0)	1825906
2278	11.9	0.0	0.0	chr19	13849734	13850043	(44767573)	C	AluSq2	SINE/Alu	(2)	311	2	1827952
498	24.8	4.8	11.6	chr19	13850044	13850136	(44767480)	+	MIR	SINE/MIR	172	257	(5)	1827951
12	21.6	0.0	0.0	chr19	14136479	14136510	(44481106)	+	G-rich	Low_complexity	1	32	(0)	1828671
1519	26.7	15.3	5.5	chr19	14145284	14146259	(44471357)	C	L2a	LINE/L2	(3)	3423	2313	1828696
14	18.2	2.6	2.5	chr19	14518366	14518404	(44099212)	+	(CCG)n	Simple_repeat	1	40	(0)	1829698
12	11.9	4.8	6.8	chr19	14518474	14518515	(44099101)	+	(CCG)n	Simple_repeat	1	44	(0)	1829699
2047	12.8	0.3	0.7	chr19	15281736	15282017	(43335599)	+	AluSx3	SINE/Alu	1	281	(30)	1831498
392	23.5	15.0	0.7	chr19	15555684	15555820	(43061796)	C	MIRb	SINE/MIR	(16)	252	93	1832093
258	34.3	7.8	1.4	chr19	16345293	16345437	(42272179)	C	MIRb	SINE/MIR	(111)	157	3	1833779
1414	19.7	8.8	5.7	chr19	16608170	16608541	(42009075)	+	MER63D	DNA/hAT-Blackjack	6	390	(671)	1834265
788	20.2	1.8	0.6	chr19	16608679	16608842	(42008774)	+	MER58B	DNA/hAT-Charlie	176	341	(0)	1834266
872	18.0	1.2	0.6	chr19	17108364	17108531	(41509085)	C	MER20	DNA/hAT-Charlie	(2)	217	49	1835504
199	13.9	12.2	0.0	chr19	17306083	17306125	(41311491)	C	MIRc	SINE/MIR	(136)	132	84	1835990
231	36.2	6.1	2.5	chr19	17333841	17334044	(41283572)	+	L2c	LINE/L2	2916	3127	(260)	1836047
659	26.1	10.0	1.0	chr19	17334054	17334254	(41283362)	C	MIR	SINE/MIR	(6)	256	36	1836048
1237	13.6	0.5	1.1	chr19	17336339	17336529	(41281087)	+	AluJb	SINE/Alu	120	309	(3)	1836058
201	20.4	2.2	0.0	chr19	17336676	17336719	(41280897)	+	MamTip2	DNA/hAT-Tip100	100	144	(161)	1836059
997	7.9	0.0	0.0	chr19	17419595	17419721	(41197895)	C	AluSc	SINE/Alu	(182)	127	1	1836293
191	31.6	2.6	1.3	chr19	17555225	17555301	(41062315)	C	MIRc	SINE/MIR	(74)	194	117	1836687
20	7.2	0.0	0.0	chr19	18282216	18282245	(40335371)	+	(CCCT)n	Simple_repeat	1	30	(0)	1838530
311	26.9	6.3	2.5	chr19	18282357	18282478	(40335138)	C	MIR3	SINE/MIR	(52)	156	30	1838531
2154	14.1	0.0	0.3	chr19	18365338	18365643	(40251973)	C	AluJb	SINE/Alu	(7)	305	1	1838731
20	24.7	1.8	0.0	chr19	18419440	18419496	(40198120)	+	(GCC)n	Simple_repeat	1	58	(0)	1838870
13	19.8	0.0	2.7	chr19	18419535	18419571	(40198045)	+	G-rich	Low_complexity	1	37	(0)	1838871
723	21.7	12.6	6.1	chr19	18439406	18439848	(40177768)	+	MER39	LTR/ERV1	2	536	(171)	1838885
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
339	37.2	4.9	9.6	chr19	18629832	18630301	(39987315)	+	L2a	LINE/L2	2924	3370	(56)	1839272
1457	15.2	5.2	0.0	chr19	19427003	19427312	(39190304)	+	L1MB3	LINE/L1	5856	6182	(1)	1840972
560	27.6	4.5	6.1	chr19	28319207	28319434	(30298182)	C	L2a	LINE/L2	(0)	3426	3203	1848580
3823	20.4	1.8	4.1	chr19	28319439	28319821	(30297795)	C	LTR39	LTR/ERV1	(0)	783	413	1848581
947	14.4	11.7	0.0	chr19	28425600	28425780	(30191836)	C	Tigger1a_Art	DNA/TcMar-Tigger	(3)	494	290	1848750
203	26.4	15.4	2.6	chr19	29662434	29662546	(28955070)	+	MIRb	SINE/MIR	127	256	(12)	1850598
1233	20.9	3.6	1.8	chr19	29690947	29691219	(28926397)	C	MLT1A	LTR/ERVL-MaLR	(7)	367	90	1850644
2157	11.4	1.9	5.7	chr19	29691227	29691437	(28926179)	C	THE1B	LTR/ERVL-MaLR	(6)	358	159	1850645
5990	22.8	13.5	3.2	chr19	30028581	30030640	(28586976)	C	L1MB7	LINE/L1	(288)	2368	66	1851305
1609	20.5	9.2	0.9	chr19	31312642	31313088	(27304528)	+	MER113	DNA/hAT-Charlie	1	488	(33)	1853035
16	16.2	0.0	2.7	chr19	31349229	31349265	(27268351)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	1853079
15	17.9	0.0	4.8	chr19	31349277	31349318	(27268298)	+	G-rich	Low_complexity	1	42	(0)	1853080
39	18.5	1.0	4.0	chr19	31349425	31349523	(27268093)	+	GA-rich	Low_complexity	1	100	(0)	1853081
3207	19.7	11.1	2.2	chr19	32373384	32374169	(26243447)	C	Tigger6a	DNA/TcMar-Tigger	(211)	872	8	1854681
18	0.0	0.0	0.0	chr19	32374170	32374189	(26243427)	+	(AC)n	Simple_repeat	1	20	(0)	1854682
647	28.8	7.2	5.3	chr19	32374202	32374465	(26243151)	C	L1M1	LINE/L1	(1701)	4445	4173	1854683
929	25.1	3.2	0.9	chr19	32387756	32387968	(26229648)	+	MER58A	DNA/hAT-Charlie	2	219	(5)	1854700
1950	15.6	0.0	0.3	chr19	32398298	32398580	(26219036)	+	AluSz6	SINE/Alu	1	282	(30)	1854720
51	0.0	0.0	0.0	chr19	32398581	32398626	(26218990)	+	(AATA)n	Simple_repeat	1	46	(0)	1854721
292	31.3	6.1	2.8	chr19	32398739	32398991	(26218625)	+	L1M5	LINE/L1	4517	4778	(1368)	1854722
22757	7.9	1.9	0.9	chr19	32781968	32788071	(25829545)	C	L1PA7	LINE/L1	(0)	6154	5	1855491
1810	11.2	8.4	1.1	chr19	32971398	32971674	(25645942)	+	AluJr	SINE/Alu	2	300	(12)	1855839
799	12.2	1.7	1.7	chr19	32972462	32972576	(25645040)	C	AluJo	SINE/Alu	(197)	115	1	1855840
1843	17.2	0.0	2.4	chr19	33122783	33123073	(25494543)	+	AluJr	SINE/Alu	1	284	(28)	1856221
50	0.0	0.0	0.0	chr19	33123074	33123118	(25494498)	+	(AAAT)n	Simple_repeat	1	45	(0)	1856222
2407	8.4	0.3	2.8	chr19	33123119	33123438	(25494178)	+	AluSp	SINE/Alu	2	313	(0)	1856223
1658	17.1	1.4	3.0	chr19	33159048	33159335	(25458281)	+	AluJo	SINE/Alu	1	285	(27)	1856319
56	0.0	0.0	0.0	chr19	33159336	33159385	(25458231)	+	(AAAT)n	Simple_repeat	1	50	(0)	1856320
3026	17.9	7.5	2.4	chr19	33159395	33159689	(25457927)	+	Tigger17a	DNA/TcMar-Tigger	305	615	(39)	1856317
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
1957	12.5	0.7	0.0	chr19	33317184	33317455	(25300161)	C	AluSx1	SINE/Alu	(38)	274	1	1856581
13	7.7	0.0	9.1	chr19	33521826	33521858	(25095758)	+	G-rich	Low_complexity	1	33	(0)	1856870
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
222	31.6	11.4	4.1	chr19	33778034	33778155	(24839461)	C	MIR	SINE/MIR	(117)	145	14	1857292
205	34.9	4.5	0.0	chr19	34134880	34134985	(24482631)	C	MIRb	SINE/MIR	(118)	150	40	1857972
1918	13.8	5.5	0.0	chr19	34135399	34135687	(24481929)	C	AluSz6	SINE/Alu	(6)	306	1	1857974
497	22.7	12.4	5.3	chr19	34135846	34136120	(24481496)	C	L1ME1	LINE/L1	(3)	6331	5895	1857975
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
939	27.9	2.4	2.7	chr19	34183575	34183769	(24433847)	+	HAL1	LINE/L1	108	301	(2206)	1858095
579	27.1	9.4	0.5	chr19	34183844	34184036	(24433580)	C	L1ME1	LINE/L1	(10)	6169	5958	1858097
2316	10.2	0.7	0.0	chr19	34243304	34243606	(24374010)	+	AluSz	SINE/Alu	1	305	(7)	1858231
196	36.1	0.0	2.4	chr19	34259411	34259495	(24358121)	C	L2b	LINE/L2	(4)	3371	3289	1858272
248	19.0	1.7	4.9	chr19	34259582	34259642	(24357974)	+	L2a	LINE/L2	3326	3384	(42)	1858273
19	3.8	0.0	0.0	chr19	34259655	34259681	(24357935)	+	(TTTG)n	Simple_repeat	1	27	(0)	1858274
2405	12.3	1.9	1.1	chr19	34259730	34260099	(24357517)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	1858275
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
11	13.2	5.7	2.7	chr19	34772894	34772928	(23844688)	+	G-rich	Low_complexity	1	37	(0)	1859111
17	29.1	3.1	1.5	chr19	35000120	35000184	(23617432)	+	(TC)n	Simple_repeat	1	67	(0)	1859480
235	23.1	4.4	0.0	chr19	35214504	35214568	(23403048)	+	MLT1K	LTR/ERVL-MaLR	88	155	(440)	1859956
634	26.6	5.5	7.9	chr19	35214589	35214829	(23402787)	+	MIR	SINE/MIR	28	262	(0)	1859957
12	28.7	0.0	0.0	chr19	35775679	35775720	(22841896)	+	(CGTC)n	Simple_repeat	1	42	(0)	1861124
18	11.0	2.3	4.5	chr19	35775723	35775765	(22841851)	+	(GCCCC)n	Simple_repeat	1	44	(0)	1861125
1564	16.7	12.1	0.0	chr19	35881890	35882165	(22735451)	+	7SLRNA	srpRNA	1	314	(6)	1861356
47	0.0	2.2	0.0	chr19	35882166	35882211	(22735405)	+	(AAAT)n	Simple_repeat	1	47	(0)	1861357
298	22.9	4.5	0.0	chr19	35882213	35882302	(22735314)	+	MER91B	DNA/hAT-Tip100	44	202	(3322)	1861358
274	19.5	14.4	0.0	chr19	35882320	35882396	(22735220)	+	MER91B	DNA/hAT-Tip100	100	189	(1)	1861359
1994	6.3	9.4	2.5	chr19	35899298	35899582	(22718034)	+	AluSx1	SINE/Alu	1	307	(5)	1861403
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
757	33.1	10.8	4.5	chr19	36070670	36070925	(22546691)	C	Kanga11a	DNA/TcMar-Tc2	(439)	531	244	1861806
14	24.5	0.0	2.2	chr19	36115480	36115524	(22502092)	+	(GCGGCG)n	Simple_repeat	1	45	(0)	1861899
492	30.3	15.7	4.6	chr19	36119910	36120296	(22497320)	+	L2a	LINE/L2	2898	3426	(0)	1861908
639	21.9	9.1	1.2	chr19	36169400	36169561	(22448055)	C	LTR68	LTR/ERV1	(154)	586	411	1862016
354	13.6	3.0	1.5	chr19	36169577	36169642	(22447974)	+	AluJo	SINE/Alu	236	302	(10)	1862017
2278	9.3	0.0	0.0	chr19	36170440	36170729	(22446887)	C	AluSx1	SINE/Alu	(22)	290	1	1862024
354	23.5	3.4	12.2	chr19	36170730	36170798	(22446818)	C	MLT1F	LTR/ERVL-MaLR	(57)	491	430	1862023
242	29.5	3.7	2.5	chr19	36377984	36378063	(22239553)	C	LTR65	LTR/ERV1	(6)	663	583	1862426
665	22.1	2.6	0.0	chr19	36378309	36378457	(22239159)	C	LTR65	LTR/ERV1	(499)	170	18	1862426
209	27.8	19.4	2.2	chr19	36916809	36916944	(21700672)	+	L2	LINE/L2	2042	2206	(1213)	1863510
2547	3.8	0.0	0.0	chr19	37317180	37317472	(21300144)	C	AluYc3	SINE/Alu	(6)	294	2	1864229
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
2173	10.6	0.0	0.3	chr19	37918588	37918871	(20698745)	+	AluSx1	SINE/Alu	1	283	(29)	1865375
52	0.0	0.0	0.0	chr19	37918872	37918918	(20698698)	+	(AAAT)n	Simple_repeat	1	47	(0)	1865376
2212	11.5	0.0	2.6	chr19	37928289	37928593	(20689023)	+	AluSz	SINE/Alu	1	297	(15)	1865400
676	19.8	10.2	8.2	chr19	37928594	37928751	(20688865)	C	MER5A	DNA/hAT-Charlie	(18)	171	4	1865399
892	29.3	4.0	3.0	chr19	37928761	37929161	(20688455)	C	MLT1L	LTR/ERVL-MaLR	(29)	581	177	1865401
454	23.7	11.7	5.5	chr19	38270358	38270540	(20347076)	C	L2a	LINE/L2	(0)	3426	3231	1866274
213	26.5	16.4	0.3	chr19	38374243	38374355	(20243261)	+	MIR	SINE/MIR	18	155	(113)	1866528
15	26.1	1.4	4.3	chr19	38388628	38388716	(20228900)	+	(CCCCTCC)n	Simple_repeat	1	86	(0)	1866554
1694	12.5	0.3	13.3	chr19	38402454	38402798	(20214818)	+	AluJb	SINE/Alu	1	300	(12)	1866577
662	18.3	4.8	19.6	chr19	38544444	38544667	(20072949)	+	MER91B	DNA/hAT-Tip100	1	189	(1)	1866900
1071	28.6	16.0	2.4	chr19	38544838	38545328	(20072288)	C	MLT1K	LTR/ERVL-MaLR	(21)	574	5	1866901
2434	6.9	0.0	0.7	chr19	38646887	38647190	(19970426)	+	AluSz	SINE/Alu	1	302	(10)	1867184
359	22.4	16.1	14.1	chr19	38647191	38647321	(19970295)	+	L2a	LINE/L2	3284	3418	(8)	1867181
268	26.3	49.5	0.0	chr19	38684077	38684209	(19933407)	+	MIR	SINE/MIR	60	259	(3)	1867246
15	8.0	0.0	3.5	chr19	38684748	38684776	(19932840)	+	(TCTTT)n	Simple_repeat	1	29	(0)	1867247
1816	18.4	0.3	1.9	chr19	38799306	38799615	(19818001)	+	AluJr	SINE/Alu	1	305	(7)	1867473
679	20.9	5.2	15.8	chr19	38799616	38799715	(19817901)	C	L1ME2z	LINE/L1	(334)	6110	6023	1867467
871	9.3	0.8	0.0	chr19	38832012	38832129	(19785487)	+	AluYc	SINE/Alu	181	299	(0)	1867545
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
2506	14.7	0.5	0.7	chr19	38862477	38862887	(19754729)	C	LTR35A	LTR/ERV1	(0)	547	138	1867607
2333	9.8	0.0	0.7	chr19	38862888	38863192	(19754424)	C	AluSx1	SINE/Alu	(9)	303	1	1867608
1105	17.7	8.5	10.2	chr19	38863197	38863556	(19754060)	+	LTR49-int	LTR/ERV1	1016	1575	(4756)	1867609
2217	12.6	0.0	0.7	chr19	38863557	38863866	(19753750)	+	AluSx	SINE/Alu	1	308	(4)	1867610
193	16.2	5.1	0.0	chr19	38900729	38900765	(19716851)	+	L2a	LINE/L2	3305	3343	(83)	1867706
378	34.3	11.1	1.1	chr19	38900755	38901128	(19716488)	C	L2a	LINE/L2	(0)	3426	3011	1867707
13	21.9	0.0	2.6	chr19	38975822	38975860	(19641756)	+	(GCGG)n	Simple_repeat	1	39	(0)	1867893
629	24.8	8.6	0.7	chr19	39033010	39033159	(19584457)	C	MIR	SINE/MIR	(88)	174	12	1868055
2355	9.4	0.0	1.3	chr19	39033191	39033499	(19584117)	+	AluSz	SINE/Alu	1	305	(7)	1868056
428	18.2	21.0	0.7	chr19	39038016	39038159	(19579457)	+	MER20B	DNA/hAT-Charlie	603	783	(0)	1868073
1681	16.0	6.3	9.3	chr19	39038387	39038494	(19579122)	+	MER66B	LTR/ERV1	1	85	(401)	1868074
603	29.6	6.3	1.3	chr19	39125237	39125462	(19492154)	+	MIRb	SINE/MIR	17	254	(14)	1868332
17	27.4	2.2	5.3	chr19	39409702	39409793	(19207823)	+	G-rich	Low_complexity	1	94	(0)	1869013
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
2145	10.5	1.0	1.0	chr19	39431435	39431729	(19185887)	+	AluSx	SINE/Alu	1	295	(17)	1869053
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
299	27.6	3.0	3.0	chr19	39844120	39844220	(18773396)	+	L2	LINE/L2	2762	2862	(557)	1869732
2016	12.4	0.3	2.1	chr19	40206812	40207102	(18410514)	+	AluSz6	SINE/Alu	1	286	(26)	1870484
348	27.0	9.8	2.2	chr19	40285799	40285943	(18331673)	+	MIR	SINE/MIR	15	177	(91)	1870652
728	31.9	7.0	5.7	chr19	40424526	40425238	(18192378)	C	L2a	LINE/L2	(145)	3242	2523	1871021
330	31.7	13.1	5.1	chr19	40426326	40426521	(18191095)	+	MIRb	SINE/MIR	54	267	(1)	1871023
492	25.5	20.9	0.5	chr19	40433498	40433706	(18183910)	C	L2a	LINE/L2	(338)	3081	2819	1871042
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
872	27.7	8.3	4.8	chr19	40523132	40523330	(18094286)	C	L2a	LINE/L2	(215)	3211	3011	1871310
1565	14.0	2.8	5.8	chr19	40567006	40567298	(18050318)	+	AluJo	SINE/Alu	1	284	(28)	1871434
52	0.0	0.0	0.0	chr19	40567299	40567345	(18050271)	+	(AAAT)n	Simple_repeat	1	47	(0)	1871435
262	22.6	4.6	0.0	chr19	40584154	40584215	(18033401)	C	L2a	LINE/L2	(0)	3426	3362	1871470
2133	13.7	0.3	0.7	chr19	40593237	40593543	(18024073)	C	AluJo	SINE/Alu	(6)	306	1	1871491
2147	13.2	0.0	1.3	chr19	40593782	40594084	(18023532)	C	AluSz	SINE/Alu	(0)	312	14	1871492
15	7.2	3.3	0.0	chr19	40602184	40602206	(18015410)	+	(GGGGGT)n	Simple_repeat	1	24	(0)	1871502
12	11.0	2.9	5.7	chr19	40602488	40602521	(18015095)	+	(GCCCA)n	Simple_repeat	1	35	(0)	1871503
42	0.0	0.0	0.0	chr19	40634800	40634837	(17982779)	+	(CAT)n	Simple_repeat	1	38	(0)	1871567
15	25.0	0.0	2.0	chr19	40663310	40663358	(17954258)	+	G-rich	Low_complexity	1	49	(0)	1871651
1482	20.9	0.4	0.0	chr19	40738876	40739138	(17878478)	C	MER44B	DNA/TcMar-Tigger	(284)	266	3	1871846
636	26.9	0.7	0.0	chr19	40739143	40739291	(17878325)	C	MIR	SINE/MIR	(111)	151	2	1871845
228	24.6	10.3	0.0	chr19	40777174	40777234	(17840382)	+	MIR	SINE/MIR	77	144	(118)	1871937
263	29.5	0.9	2.6	chr19	40801687	40801788	(17815828)	C	LTR5B	LTR/ERVK	(179)	823	722	1871995
1674	1.4	0.5	0.0	chr19	40801789	40801895	(17815721)	C	SVA_D	Retroposon/SVA	(20)	1366	1157	1871997
340	36.9	6.7	1.2	chr19	41408275	41408444	(17209172)	+	MIRb	SINE/MIR	81	260	(8)	1873376
736	0.0	0.0	0.0	chr19	41501338	41501438	(17116178)	C	AluYa8	SINE/Alu	(0)	310	205	1873534
1626	23.0	6.7	2.0	chr19	41501466	41501864	(17115752)	+	L1PA12	LINE/L1	88	506	(6475)	1873535
193	34.4	5.3	0.0	chr19	41931277	41931366	(16686250)	+	MIRb	SINE/MIR	168	262	(6)	1874200
14	10.8	3.1	3.0	chr19	41931574	41931605	(16686011)	+	GA-rich	Low_complexity	1	33	(0)	1874201
2733	25.7	10.0	3.5	chr19	42010086	42010825	(16606791)	+	L1MEc	LINE/L1	1124	1935	(4465)	1874353
993	26.9	7.4	2.0	chr19	42032266	42032622	(16584994)	+	L1ME3G	LINE/L1	169	546	(378)	1874420
662	28.4	14.5	8.7	chr19	42032624	42032989	(16584627)	+	L2b	LINE/L2	2407	2823	(596)	1874421
17	9.4	5.9	5.6	chr19	42076164	42076214	(16541402)	+	(GCGAGA)n	Simple_repeat	1	54	(0)	1874520
182	32.8	1.7	0.0	chr19	42243680	42243737	(16373879)	+	X9_LINE	LINE/L1	286	344	(592)	1874874
2392	7.0	0.0	0.7	chr19	42243744	42244041	(16373575)	+	AluSq2	SINE/Alu	1	296	(17)	1874875
279	26.7	14.4	1.0	chr19	42280229	42280330	(16337286)	+	MIRb	SINE/MIR	19	136	(132)	1874951
12	28.5	4.6	1.5	chr19	42280618	42280682	(16336934)	+	(GCCG)n	Simple_repeat	1	68	(0)	1874952
192	21.6	0.0	0.0	chr19	42325126	42325162	(16292454)	+	MIR1_Amn	SINE/MIR	117	153	(77)	1875033
366	22.6	7.1	2.0	chr19	42396641	42396773	(16220843)	+	MSR1	Satellite	1	139	(3)	1875197
876	15.4	0.0	0.0	chr19	42468654	42468789	(16148827)	+	AluSx	SINE/Alu	1	136	(176)	1875343
528	25.7	11.0	1.9	chr19	43475567	43475780	(15141836)	+	MIR	SINE/MIR	14	249	(13)	1876864
738	16.8	12.3	0.0	chr19	43525641	43525789	(15091827)	C	MER96	DNA/hAT-Tip100	(0)	175	6	1877014
710	7.9	0.0	0.0	chr19	43527983	43528071	(15089545)	+	AluSz6	SINE/Alu	206	294	(18)	1877021
399	30.3	10.4	4.8	chr19	43572264	43572471	(15045145)	C	MIRc	SINE/MIR	(0)	268	48	1877138
363	18.0	1.0	10.7	chr19	43618704	43618815	(14998801)	C	MER53	DNA/hAT	(68)	125	25	1877254
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
272	29.7	14.2	0.0	chr19	43621683	43621827	(14995789)	+	L2a	LINE/L2	3209	3377	(49)	1877257
224	26.9	10.3	0.0	chr19	43621869	43621946	(14995670)	+	L2a	LINE/L2	3331	3417	(9)	1877261
402	24.8	7.5	8.6	chr19	43934794	43934956	(14682660)	C	MIR	SINE/MIR	(40)	222	62	1877949
3328	12.6	7.9	3.1	chr19	44111865	44112444	(14505172)	C	LTR9	LTR/ERV1	(0)	612	3	1878223
1642	22.8	7.4	3.3	chr19	44112445	44112529	(14505087)	+	L1MB5	LINE/L1	6089	6165	(9)	1878222
284	25.3	0.0	1.3	chr19	44163809	44163884	(14453732)	C	L1MB7	LINE/L1	(87)	6097	6023	1878307
447	29.1	6.5	1.2	chr19	44260179	44260338	(14357278)	+	MIR	SINE/MIR	64	232	(30)	1878456
472	25.2	9.4	2.5	chr19	44752957	44753129	(13864487)	+	MIR	SINE/MIR	70	250	(12)	1879531
1041	21.6	10.3	4.2	chr19	44755205	44755557	(13862059)	C	LTR16A	LTR/ERVL	(51)	400	24	1879537
379	28.6	4.2	12.1	chr19	44755618	44755629	(13861987)	C	L2	LINE/L2	(602)	2817	2804	1879538
2125	13.0	0.0	2.2	chr19	44755630	44755945	(13861671)	+	AluSz	SINE/Alu	1	309	(3)	1879539
356	26.8	0.0	5.5	chr19	44951585	44951724	(13665892)	+	MSR1	Satellite	1	132	(1)	1880064
1721	17.5	1.3	2.5	chr19	44951817	44952130	(13665486)	C	AluJo	SINE/Alu	(0)	312	3	1880065
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
1963	13.7	2.0	0.0	chr19	45092495	45092786	(13524830)	C	AluJr	SINE/Alu	(14)	298	1	1880444
424	12.1	0.0	14.3	chr19	45370871	45370961	(13246655)	+	FLAM_A	SINE/Alu	55	132	(10)	1881119
813	24.2	13.1	1.2	chr19	45391471	45391813	(13225803)	+	MLT1J	LTR/ERVL-MaLR	82	471	(41)	1881183
1553	14.4	0.3	10.0	chr19	45440720	45441039	(13176577)	C	AluJr	SINE/Alu	(20)	292	4	1881324
263	27.3	17.9	1.7	chr19	45450020	45450224	(13167392)	C	MIR	SINE/MIR	(1)	267	27	1881346
2362	7.7	1.3	1.9	chr19	45450488	45450799	(13166817)	+	AluSx	SINE/Alu	1	310	(2)	1881347
11	13.2	5.7	2.7	chr19	45507667	45507701	(13109915)	+	(GAGCCC)n	Simple_repeat	1	37	(0)	1881495
346	27.6	9.9	0.8	chr19	45511323	45511450	(13106166)	C	MIRb	SINE/MIR	(18)	250	110	1881503
1994	13.1	2.1	0.0	chr19	45523191	45523495	(13094121)	C	AluSz	SINE/Alu	(0)	312	2	1881536
489	27.4	2.6	5.9	chr19	45568694	45568895	(13048721)	+	MLT1K	LTR/ERVL-MaLR	130	324	(271)	1881662
518	21.4	5.6	0.0	chr19	45568905	45569021	(13048595)	+	L2a	LINE/L2	3303	3426	(0)	1881663
17	13.2	1.6	9.7	chr19	45780645	45780706	(12836910)	+	GA-rich	Low_complexity	1	57	(0)	1882240
924	30.4	4.8	5.4	chr19	45862394	45862941	(12754675)	C	L2b	LINE/L2	(1)	3374	2823	1882441
3708	12.6	2.2	1.5	chr19	46133207	46133793	(12483823)	C	LTR10C	LTR/ERV1	(0)	591	1	1882995
258	20.5	8.4	5.3	chr19	46346567	46346670	(12270946)	C	MIRc	SINE/MIR	(57)	151	49	1883450
948	25.2	10.2	2.5	chr19	46766476	46767066	(11850550)	C	L2a	LINE/L2	(203)	3223	2573	1884482
571	18.2	7.2	4.1	chr19	46851218	46851338	(11766278)	C	AluJr4	SINE/Alu	(179)	133	9	1884739
682	28.5	6.5	8.2	chr19	46898582	46898775	(11718841)	C	LTR33A	LTR/ERVL	(0)	520	331	1884861
41	0.0	0.0	0.0	chr19	46898776	46898812	(11718804)	+	(GCT)n	Simple_repeat	1	37	(0)	1884862
682	28.5	6.5	8.2	chr19	46898813	46899106	(11718510)	C	LTR33A	LTR/ERVL	(190)	330	41	1884861
237	14.2	9.1	2.3	chr19	46978440	46979121	(11638495)	+	(GT)n	Simple_repeat	1	744	(0)	1885012
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
12	25.8	0.0	0.0	chr19	47273279	47273315	(11344301)	+	G-rich	Low_complexity	1	37	(0)	1885715
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
1225	15.5	4.9	0.9	chr19	47481588	47481802	(11135814)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1886264
12	12.8	5.6	2.6	chr19	47481812	47481847	(11135769)	+	(ATCTGGA)n	Simple_repeat	1	38	(0)	1886265
230	20.0	0.0	0.0	chr19	47483859	47483903	(11133713)	C	MER117	DNA/hAT-Charlie	(95)	102	58	1886269
19	5.6	8.1	0.0	chr19	47610186	47610222	(11007394)	+	(GGAG)n	Simple_repeat	1	40	(0)	1886574
13	26.6	2.0	1.9	chr19	47729571	47729621	(10887995)	+	(GGCA)n	Simple_repeat	1	52	(0)	1886901
38	34.3	2.9	0.6	chr19	47729812	47729866	(10887750)	+	(TC)n	Simple_repeat	1	82	(98)	1886902
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
1211	21.3	2.6	1.0	chr19	47994899	47995201	(10622415)	C	MER33	DNA/hAT-Charlie	(7)	317	10	1887649
355	21.2	3.4	5.6	chr19	48203649	48203738	(10413878)	+	L2a	LINE/L2	3338	3425	(1)	1888195
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
2414	10.9	0.0	0.0	chr19	48466068	48466379	(10151237)	C	AluSx	SINE/Alu	(0)	312	1	1888820
225	28.6	0.0	0.0	chr19	48539564	48539619	(10077997)	C	MIRb	SINE/MIR	(6)	262	207	1888999
504	29.0	8.9	1.0	chr19	48539660	48539853	(10077763)	+	MIR	SINE/MIR	51	252	(10)	1889000
2102	11.3	0.0	0.0	chr19	48539883	48540164	(10077452)	+	AluSx1	SINE/Alu	20	301	(11)	1889001
2357	10.2	0.0	0.6	chr19	48608433	48608745	(10008871)	C	AluSx3	SINE/Alu	(0)	311	1	1889212
632	22.4	5.3	17.1	chr19	48608746	48608810	(10008806)	+	MER5A	DNA/hAT-Charlie	128	189	(0)	1889210
532	24.3	3.2	9.9	chr19	48608819	48609019	(10008597)	+	MER20	DNA/hAT-Charlie	1	187	(32)	1889213
2176	12.2	0.3	0.3	chr19	48774302	48774604	(9843012)	C	AluSz	SINE/Alu	(9)	303	1	1889569
710	23.7	4.0	21.5	chr19	48774605	48774883	(9842733)	C	L1MC4	LINE/L1	(1104)	6938	6700	1889561
2111	12.9	0.0	1.6	chr19	48874919	48875229	(9742387)	C	AluSz6	SINE/Alu	(5)	307	2	1889839
181	18.0	0.0	10.7	chr19	48954548	48954603	(9663013)	+	L2	LINE/L2	3019	3068	(351)	1890057
15	21.0	1.8	5.4	chr19	48954872	48954926	(9662690)	+	(GGC)n	Simple_repeat	1	56	(0)	1890063
28	0.0	0.0	0.0	chr19	49121787	49121813	(9495803)	+	(TTTA)n	Simple_repeat	1	27	(0)	1890423
1735	16.0	2.6	4.4	chr19	49121814	49121935	(9495681)	C	AluJb	SINE/Alu	(190)	122	2	1890421
2373	8.2	0.3	0.7	chr19	49122079	49122381	(9495235)	C	AluSp	SINE/Alu	(11)	302	1	1890424
14	7.3	3.2	0.0	chr19	49122689	49122711	(9494905)	+	(TTG)n	Simple_repeat	1	24	(0)	1890425
2341	9.1	0.0	1.6	chr19	49122712	49123020	(9494596)	C	AluY	SINE/Alu	(7)	304	1	1890426
2210	11.5	0.0	0.3	chr19	49123446	49123741	(9493875)	C	AluSz	SINE/Alu	(17)	295	1	1890429
294	20.7	2.7	2.5	chr19	49157903	49158099	(9459517)	C	MSR1	Satellite	(0)	197	1	1890486
1494	16.6	0.7	0.8	chr19	49271153	49271410	(9346206)	+	MER1B	DNA/hAT-Charlie	40	339	(0)	1890761
301	23.9	8.0	4.2	chr19	49331532	49331627	(9285989)	C	MLT1J2	LTR/ERVL-MaLR	(0)	444	345	1890890
677	29.4	3.6	0.5	chr19	49331653	49331864	(9285752)	C	MLT1J2	LTR/ERVL-MaLR	(211)	237	19	1890890
307	10.5	0.0	0.0	chr19	49331863	49331900	(9285716)	+	AluJb	SINE/Alu	214	251	(61)	1890891
2158	10.4	1.3	0.7	chr19	49364068	49364365	(9253251)	+	AluJb	SINE/Alu	1	300	(12)	1890952
821	14.5	0.0	8.3	chr19	49452002	49452146	(9165470)	+	FLAM_C	SINE/Alu	1	133	(10)	1891121
15	17.3	9.8	1.5	chr19	49452281	49452341	(9165275)	+	(AGATCT)n	Simple_repeat	1	67	(0)	1891122
1645	15.9	0.0	3.6	chr19	49452378	49452654	(9164962)	+	AluJb	SINE/Alu	40	306	(6)	1891123
2221	12.0	0.0	0.3	chr19	49452714	49453021	(9164595)	C	AluSx	SINE/Alu	(5)	307	1	1891124
874	25.1	8.6	8.8	chr19	49546772	49547107	(9070509)	C	L1MEb	LINE/L1	(5684)	386	44	1891361
332	18.0	5.8	1.2	chr19	49583371	49583468	(9034148)	+	MSR1	Satellite	1	102	(9)	1891470
871	12.5	0.0	0.8	chr19	49635137	49635264	(8982352)	C	FLAM_C	SINE/Alu	(16)	127	1	1891589
332	22.1	2.8	4.8	chr19	49640837	49640967	(8976649)	C	MSR1	Satellite	(0)	128	1	1891595
2412	8.5	0.0	0.0	chr19	49641311	49641616	(8976000)	C	AluSq2	SINE/Alu	(7)	306	1	1891596
594	18.5	4.1	0.1	chr19	49641619	49641750	(8975866)	C	FLAM_C	SINE/Alu	(82)	220	5	1891597
1914	14.7	1.4	0.3	chr19	49681057	49681348	(8936268)	C	AluJb	SINE/Alu	(17)	295	1	1891674
185	19.5	6.8	0.0	chr19	49765985	49766025	(8851591)	C	L2c	LINE/L2	(78)	3309	3266	1891889
288	26.2	5.0	0.2	chr19	49766133	49766271	(8851345)	+	MIRc	SINE/MIR	60	199	(31)	1891890
12	14.1	3.0	2.9	chr19	49818246	49818278	(8799338)	+	(CGCGCG)n	Simple_repeat	1	34	(0)	1892011
411	29.5	7.2	0.0	chr19	49867868	49867996	(8749620)	+	MIR	SINE/MIR	103	241	(21)	1892095
2382	4.0	0.0	0.4	chr19	49868004	49868279	(8749337)	C	AluY	SINE/Alu	(9)	302	28	1892096
1038	26.7	9.1	2.5	chr19	50173444	50173800	(8443816)	C	L2a	LINE/L2	(28)	3398	3016	1892853
18	17.7	2.1	4.0	chr19	50658137	50658185	(7959431)	+	G-rich	Low_complexity	1	48	(0)	1894034
13	13.6	4.3	6.2	chr19	50725315	50725360	(7892256)	+	(GCCCA)n	Simple_repeat	1	48	(0)	1894171
29	21.3	1.9	9.4	chr19	50833922	50834077	(7783539)	+	(TCTGGA)n	Simple_repeat	1	159	(0)	1894428
15	25.7	1.9	1.8	chr19	50834132	50834185	(7783431)	+	(GAATCTG)n	Simple_repeat	1	55	(0)	1894429
14	22.9	2.1	0.0	chr19	50834244	50834273	(7783343)	+	(GATTCTG)n	Simple_repeat	1	30	(0)	1894430
2163	11.3	0.0	0.0	chr19	50834274	50834575	(7783041)	C	AluSq2	SINE/Alu	(10)	303	2	1894431
185	32.7	1.8	0.0	chr19	51394013	51394067	(7223549)	C	MIR3	SINE/MIR	(147)	61	6	1895539
314	25.0	4.0	2.5	chr19	51690141	51690343	(6927273)	+	MSR1	Satellite	1	205	(0)	1896052
3658	6.7	3.5	0.0	chr19	52735281	52735746	(5881870)	+	LTR2B	LTR/ERV1	1	483	(0)	1898076
747	12.6	0.0	0.0	chr19	52821821	52821931	(5795685)	+	AluYc	SINE/Alu	188	298	(1)	1898248
232	23.9	3.3	4.3	chr19	54188632	54188723	(4428893)	+	MSR1	Satellite	7	97	(14)	1901270
193	36.9	5.1	0.0	chr19	54189762	54189872	(4427744)	C	MamRTE1	LINE/RTE-BovB	(1503)	2309	2193	1901271
1874	12.7	2.0	2.3	chr19	54200327	54200626	(4416990)	+	AluJb	SINE/Alu	1	299	(13)	1901299
849	8.3	0.0	0.0	chr19	55167170	55167277	(3450339)	+	U13	snRNA	1	108	(0)	1903141
197	32.5	6.4	5.7	chr19	55576147	55576270	(3041346)	+	L2a	LINE/L2	3028	3152	(274)	1904064
671	19.5	0.5	14.5	chr19	55576356	55576455	(3041161)	+	MER3	DNA/hAT-Charlie	14	103	(106)	1904065
2310	7.9	0.3	2.3	chr19	55576456	55576759	(3040857)	+	AluSq2	SINE/Alu	1	298	(15)	1904066
12	19.3	0.0	5.1	chr19	55600208	55600246	(3017370)	+	(GCGG)n	Simple_repeat	1	39	(0)	1904120
2430	7.3	0.7	1.6	chr19	55631878	55632191	(2985425)	+	AluSp	SINE/Alu	2	312	(1)	1904195
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
13	13.9	4.7	4.4	chr19	56091434	56091476	(2526140)	+	(GTGGAGA)n	Simple_repeat	1	45	(0)	1905097
16	20.7	3.9	1.9	chr19	56404356	56404407	(2213209)	+	(CGGCCC)n	Simple_repeat	1	54	(0)	1905746
3480	12.3	5.7	2.1	chr19	57388555	57389129	(1228487)	+	LTR59	LTR/ERV1	1	597	(0)	1907726
2441	6.8	0.0	3.4	chr19	57916811	57917132	(700484)	+	AluYm1	SINE/Alu	1	311	(0)	1908540
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
374	33.4	20.8	1.4	chr19	58467837	58468206	(149410)	C	L2	LINE/L2	(536)	2883	2423	1909577
2337	7.8	1.0	0.0	chr19	58543417	58543711	(73905)	C	AluSq2	SINE/Alu	(15)	298	1	1909716
564	25.6	0.7	0.0	chr19	58543719	58543855	(73761)	C	AluJb	SINE/Alu	(39)	273	136	1909717
45	25.1	5.0	2.1	chr19	58558385	58558565	(59051)	+	(GCC)n	Simple_repeat	1	190	(0)	1909727
3184	20.1	6.5	9.5	chr2	8804731	8805671	(233387858)	C	MER21C	LTR/ERVL	(1)	937	27	1921894
1739	19.2	3.6	0.0	chr2	8805672	8805993	(233387536)	+	Tigger3a	DNA/TcMar-Tigger	13	347	(1)	1921895
4192	14.1	7.2	4.0	chr2	9000706	9001550	(233191979)	C	Tigger3b	DNA/TcMar-Tigger	(357)	874	1	1922156
370	23.4	5.0	0.0	chr2	9174864	9174957	(233018572)	C	MER20	DNA/hAT-Charlie	(57)	162	64	1922494
350	24.9	11.3	6.7	chr2	9554870	9555063	(232638466)	C	MamRep1879	DNA/hAT-Tip100?	(1)	215	12	1923167
619	27.0	6.9	4.0	chr2	11750589	11750801	(230442728)	C	MIR	SINE/MIR	(47)	221	1	1927202
2051	16.7	6.8	1.5	chr2	12261918	12262324	(229931205)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	3	1928025
320	27.8	14.2	1.2	chr2	15050706	15050876	(227142653)	+	MIRb	SINE/MIR	1	197	(71)	1932105
511	28.5	13.4	3.8	chr2	15243154	15243441	(226950088)	+	MLT1J1	LTR/ERVL-MaLR	1	320	(124)	1932423
1923	29.0	13.0	8.8	chr2	15243543	15244790	(226948739)	+	MLT1J1-int	LTR/ERVL-MaLR	46	1353	(34)	1932423
373	22.2	16.7	1.5	chr2	18156110	18156246	(224037283)	C	MIRb	SINE/MIR	(15)	253	92	1937045
873	19.9	1.1	0.0	chr2	18156258	18156438	(224037091)	C	MER5A	DNA/hAT-Charlie	(1)	188	6	1937046
2191	13.2	0.0	0.0	chr2	23927894	23928196	(218265333)	+	AluSx1	SINE/Alu	1	303	(9)	1945111
531	31.4	4.0	1.6	chr2	26073482	26073675	(216119854)	C	LTR33B	LTR/ERVL	(294)	209	11	1949282
1952	17.0	0.3	0.7	chr2	26355746	26356039	(215837490)	C	AluJb	SINE/Alu	(17)	295	3	1949813
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
577	6.8	0.0	0.0	chr2	27051214	27051287	(215142242)	+	tRNA-Ala-GCY	tRNA	1	74	(2)	1951108
217	38.7	8.8	2.8	chr2	27115519	27115872	(215077657)	+	L2	LINE/L2	2700	3076	(343)	1951200
15	8.4	0.0	6.9	chr2	27381081	27381120	(214812409)	+	(AC)n	Simple_repeat	1	37	(0)	1951699
660	24.2	1.9	7.9	chr2	27754356	27754558	(214438971)	+	MIR3	SINE/MIR	4	192	(16)	1952429
526	17.4	3.0	1.0	chr2	27765547	27765645	(214427884)	+	MER5A1	DNA/hAT-Charlie	33	133	(33)	1952451
289	29.1	6.5	4.2	chr2	31334663	31334827	(210858702)	C	MIR3	SINE/MIR	(3)	205	37	1958370
33	26.7	3.6	1.7	chr2	32062385	32062495	(210131034)	+	GA-rich	Low_complexity	1	115	(0)	1959447
332	26.0	12.4	3.4	chr2	36403755	36403929	(205789600)	C	L2	LINE/L2	(896)	2523	2331	1966017
12	26.7	4.1	0.0	chr2	37157099	37157147	(205036382)	+	(GGCG)n	Simple_repeat	1	51	(0)	1967232
354	25.3	10.2	5.7	chr2	37157311	37157469	(205036060)	C	MIRb	SINE/MIR	(100)	168	2	1967233
315	27.0	16.4	0.0	chr2	37311792	37311939	(204881590)	C	MER5B	DNA/hAT-Charlie	(1)	177	1	1967518
397	21.0	23.0	5.2	chr2	37377245	37377514	(204816015)	+	Tigger12	DNA/TcMar-Tigger	1	362	(372)	1967635
321	27.9	11.8	1.8	chr2	37377521	37377688	(204815841)	+	Tigger12A	DNA/TcMar-Tigger	632	818	(1)	1967636
380	29.6	9.3	4.3	chr2	38014747	38015000	(204178529)	C	L2c	LINE/L2	(0)	3387	3120	1968575
307	34.2	15.1	6.2	chr2	38440845	38441246	(203752283)	C	L2b	LINE/L2	(1)	3374	2931	1969229
14	25.4	3.1	3.0	chr2	38528184	38528247	(203665282)	+	(CCGGCCG)n	Simple_repeat	1	66	(0)	1969410
15	0.0	0.0	0.0	chr2	38778058	38778076	(203415453)	+	(ATT)n	Simple_repeat	1	19	(0)	1969948
609	15.5	11.0	3.7	chr2	39431810	39431943	(202761586)	C	MIR	SINE/MIR	(115)	147	3	1971182
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
371	34.7	8.4	1.5	chr2	44360244	44360442	(197833087)	C	MIRb	SINE/MIR	(17)	251	38	1979089
844	25.5	21.4	3.6	chr2	45607568	45608010	(196585519)	+	HAL1	LINE/L1	211	753	(1754)	1980953
200	31.9	3.2	2.5	chr2	45654383	45654504	(196539025)	C	MIR3	SINE/MIR	(35)	173	51	1981033
785	24.5	8.6	2.3	chr2	46481472	46481688	(195711841)	+	MIRb	SINE/MIR	37	268	(0)	1982324
231	25.8	1.5	0.0	chr2	46481693	46481758	(195711771)	C	L3	LINE/CR1	(713)	3386	3320	1982322
580	29.1	7.0	0.0	chr2	46481770	46481941	(195711588)	C	L3	LINE/CR1	(847)	3252	3068	1982322
240	33.3	4.2	4.2	chr2	46481942	46482132	(195711397)	C	CR1-3_Croc	LINE/CR1	(1589)	2016	1826	1982325
13325	8.5	0.6	0.3	chr2	47971176	47973513	(194220016)	+	L1PB	LINE/L1	3439	5780	(371)	1985178
927	24.4	13.9	3.3	chr2	48197059	48197392	(193996137)	C	MER115	DNA/hAT-Tip100	(8)	685	311	1985541
361	28.1	1.0	0.0	chr2	48197423	48197513	(193996016)	C	MER115	DNA/hAT-Tip100	(445)	248	157	1985541
987	23.3	1.5	0.0	chr2	48197514	48197706	(193995823)	+	MER58A	DNA/hAT-Charlie	1	196	(28)	1985542
816	28.6	1.2	1.2	chr2	48732950	48733193	(193460336)	+	UCON29	DNA/PiggyBac?	20	263	(176)	1986469
2075	15.3	4.4	9.3	chr2	53987443	53988082	(188205447)	C	L1MD	LINE/L1	(547)	5695	5087	1993509
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
254	23.9	0.0	5.5	chr2	56448569	56448659	(185744870)	C	MIRc	SINE/MIR	(125)	143	50	1997423
14	18.9	2.8	0.0	chr2	58768083	58768118	(183425411)	+	(CAA)n	Simple_repeat	1	37	(0)	2000243
293	33.2	7.7	3.5	chr2	59080667	59080866	(183112663)	C	MIRb	SINE/MIR	(37)	231	19	2000641
2354	10.3	0.0	0.0	chr2	60445543	60445842	(181747687)	+	AluSq2	SINE/Alu	1	300	(13)	2002469
336	29.9	6.7	8.7	chr2	60445843	60445904	(181747625)	+	MIRb	SINE/MIR	207	260	(8)	2002468
475	28.4	6.4	2.9	chr2	61288111	61288415	(180905114)	+	LTR50	LTR/ERVL	302	625	(170)	2004041
315	25.0	10.1	3.3	chr2	61493607	61493726	(180699803)	C	MER5A	DNA/hAT-Charlie	(57)	132	4	2004445
310	5.1	0.0	0.0	chr2	61855355	61855393	(180338136)	C	Alu	SINE/Alu	(112)	190	152	2005332
662	7.6	0.0	0.0	chr2	61855395	61855473	(180338056)	+	AluSx3	SINE/Alu	204	282	(29)	2005333
675	33.7	16.4	1.3	chr2	63742463	63742931	(178450598)	+	MamRTE1	LINE/RTE-BovB	2530	3083	(729)	2008260
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
516	24.5	19.9	5.1	chr2	64914849	64915123	(177278406)	+	MLT1F1	LTR/ERVL-MaLR	36	361	(199)	2010179
615	14.6	0.0	0.0	chr2	64915147	64915235	(177278294)	+	FRAM	SINE/Alu	22	110	(66)	2010180
636	22.5	2.3	13.3	chr2	64915243	64915483	(177278046)	+	MLT1F1	LTR/ERVL-MaLR	356	569	(0)	2010179
26	9.8	2.2	0.0	chr2	64988911	64988955	(177204574)	+	(CCTCC)n	Simple_repeat	1	46	(0)	2010348
775	28.4	4.2	8.6	chr2	65048845	65049194	(177144335)	C	L1MC4	LINE/L1	(172)	7870	7531	2010477
896	15.1	1.4	2.7	chr2	65049196	65049345	(177144184)	C	LTR72B	LTR/ERV1	(0)	500	353	2010480
2200	13.6	3.4	0.9	chr2	65049333	65049681	(177143848)	C	LTR45B	LTR/ERV1	(131)	358	1	2010481
284	23.2	0.0	0.0	chr2	65057598	65057653	(177135876)	+	L2a	LINE/L2	3350	3405	(21)	2010493
21	22.0	4.3	1.4	chr2	66364475	66364544	(175828985)	+	A-rich	Low_complexity	1	73	(0)	2012698
3661	15.1	8.2	4.1	chr2	67450760	67451541	(174741988)	C	MER21B	LTR/ERVL	(55)	813	6	2014108
808	26.8	1.6	6.6	chr2	67451546	67451817	(174741712)	+	MLT1H	LTR/ERVL-MaLR	115	372	(177)	2014109
11	20.5	2.9	0.0	chr2	68252737	68252770	(173940759)	+	G-rich	Low_complexity	1	35	(0)	2015306
385	31.7	3.3	1.4	chr2	69391461	69391607	(172801922)	+	MIR	SINE/MIR	2	151	(111)	2016990
23769	13.9	2.2	3.1	chr2	69790238	69792971	(172400558)	C	LTR25-int	LTR/ERV1	(1)	7187	4480	2017767
19	21.5	4.1	0.0	chr2	70108905	70108953	(172084576)	+	(TG)n	Simple_repeat	1	51	(0)	2018398
194	24.8	9.9	5.2	chr2	70123517	70123631	(172069898)	C	MIRc	SINE/MIR	(134)	134	14	2018440
2000	13.1	0.7	0.3	chr2	70123689	70123986	(172069543)	+	AluJo	SINE/Alu	2	300	(12)	2018441
245	26.3	6.1	7.7	chr2	70132993	70133113	(172060416)	C	L2a	LINE/L2	(0)	3426	3284	2018468
1819	11.2	12.4	2.6	chr2	70242641	70242944	(171950585)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	2018717
274	32.9	15.3	0.0	chr2	70995252	70995412	(171198117)	C	MIRb	SINE/MIR	(17)	251	62	2019950
200	17.0	7.8	2.1	chr2	70995595	70995642	(171197887)	C	L2c	LINE/L2	(77)	3310	3260	2019951
2760	15.5	6.0	2.7	chr2	70995719	70996269	(171197260)	+	L1MB3	LINE/L1	5601	6170	(13)	2019952
3240	19.8	2.4	2.5	chr2	72367497	72368164	(169825365)	+	L1MA2	LINE/L1	45	711	(6854)	2021946
275	36.1	0.2	3.6	chr2	84991788	84991903	(157201626)	C	MIR3	SINE/MIR	(82)	126	17	2039860
2534	4.1	1.0	0.0	chr2	85615638	85615929	(156577600)	C	AluSp	SINE/Alu	(18)	295	1	2041140
288	26.0	13.5	0.0	chr2	96012852	96012947	(146180582)	C	L2b	LINE/L2	(0)	3375	3265	2051456
188	23.8	1.6	7.3	chr2	96013236	96013303	(146180226)	+	L2c	LINE/L2	3085	3148	(239)	2051457
1891	14.6	0.0	1.7	chr2	96638705	96638998	(145554531)	+	AluJb	SINE/Alu	12	300	(12)	2052489
668	27.8	5.4	1.4	chr2	96715797	96716008	(145477521)	+	MIRb	SINE/MIR	32	252	(16)	2052625
2453	10.6	0.0	0.0	chr2	98466034	98466345	(143727184)	C	AluSz	SINE/Alu	(0)	312	1	2055053
895	30.2	9.0	7.5	chr2	99182745	99183291	(143010238)	C	L2a	LINE/L2	(1)	3425	2885	2056027
2301	9.6	0.3	0.0	chr2	99183292	99183584	(143009945)	+	AluSx1	SINE/Alu	5	298	(14)	2056028
476	26.7	16.6	0.0	chr2	99999677	99999867	(142193662)	C	MIR	SINE/MIR	(29)	233	5	2057259
300	36.2	2.0	0.0	chr2	100005130	100005278	(142188251)	+	Charlie19a	DNA/hAT-Charlie	35	186	(200)	2057265
362	23.4	2.3	5.9	chr2	100005285	100005420	(142188109)	+	Charlie19a	DNA/hAT-Charlie	256	386	(0)	2057266
19	18.9	0.0	0.0	chr2	104844882	104844923	(137348606)	+	(CATG)n	Simple_repeat	1	42	(0)	2064055
376	28.7	2.9	9.5	chr2	105344960	105345148	(136848381)	C	MER5B	DNA/hAT-Charlie	(0)	178	3	2064799
265	29.2	6.6	5.8	chr2	108448919	108449038	(133744491)	C	MIRc	SINE/MIR	(123)	145	25	2069252
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
186	22.2	0.0	4.5	chr2	119431377	119431442	(122762087)	C	MIRc	SINE/MIR	(139)	129	67	2085324
19	13.0	0.0	0.0	chr2	120344724	120344757	(121848772)	+	(GGGGA)n	Simple_repeat	1	34	(0)	2086801
384	18.0	21.6	5.1	chr2	126971826	126972001	(115221528)	+	MLT1H2	LTR/ERVL-MaLR	277	489	(0)	2096674
343	28.3	16.3	2.7	chr2	128632790	128633232	(113560297)	C	L1M5	LINE/L1	(2610)	3536	3022	2099504
3037	23.6	5.5	1.4	chr2	128633275	128634198	(113559331)	C	L1ME1	LINE/L1	(1)	6178	5224	2099505
276	9.8	3.8	10.5	chr2	132415609	132415665	(109777864)	+	MER20	DNA/hAT-Charlie	22	74	(145)	2104570
22	11.8	0.0	4.9	chr2	136248467	136248507	(105945022)	+	(TG)n	Simple_repeat	1	41	(0)	2110393
33	15.3	0.0	7.1	chr2	144463861	144463945	(97729584)	+	A-rich	Low_complexity	1	85	(0)	2121445
1741	27.6	9.4	4.6	chr2	148018077	148018976	(94174553)	+	L1ME3B	LINE/L1	5283	6195	(47)	2126009
243	36.2	8.0	2.1	chr2	149064537	149064677	(93128852)	C	MIR1_Amn	SINE/MIR	(41)	189	40	2127555
352	25.9	1.2	0.0	chr2	149065583	149065667	(93127862)	+	MER5A1	DNA/hAT-Charlie	1	86	(80)	2127556
7381	10.1	2.9	0.6	chr2	149231331	149232703	(92960826)	+	L1PB1	LINE/L1	4364	5780	(351)	2127796
225	24.4	0.0	15.2	chr2	150141308	150141399	(92052130)	C	L2c	LINE/L2	(14)	3373	3296	2128948
837	20.1	0.6	0.6	chr2	151032698	151032862	(91160667)	+	MER5A1	DNA/hAT-Charlie	2	166	(0)	2130218
494	27.9	6.7	6.1	chr2	151032863	151033061	(91160468)	+	MLT1J2	LTR/ERVL-MaLR	246	448	(0)	2130217
18	16.8	0.0	6.1	chr2	152335084	152335133	(89858396)	+	G-rich	Low_complexity	1	46	(0)	2132279
14	16.9	3.0	0.0	chr2	153478867	153478899	(88714630)	+	(GGC)n	Simple_repeat	1	34	(0)	2133771
14	26.7	0.0	0.0	chr2	153479913	153479953	(88713576)	+	(CCCT)n	Simple_repeat	1	41	(0)	2133773
859	12.3	5.2	0.0	chr2	153480020	153480165	(88713364)	+	L1MA6	LINE/L1	6147	6300	(0)	2133774
657	1.4	0.0	0.0	chr2	156401147	156401217	(85792312)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	2137396
8814	9.6	1.1	0.9	chr2	156780965	156782956	(85410573)	+	L1PB1	LINE/L1	4157	6151	(0)	2137909
2021	13.3	1.2	0.3	chr2	158232826	158233157	(83960372)	+	L1MA4	LINE/L1	5955	6289	(11)	2139879
306	26.1	5.2	1.1	chr2	159925681	159925773	(82267756)	+	MIR	SINE/MIR	56	152	(110)	2142365
224	31.4	10.4	1.1	chr2	159982270	159982356	(82211173)	C	MER5A	DNA/hAT-Charlie	(30)	159	64	2142456
257	24.7	13.5	0.0	chr2	159982415	159982491	(82211038)	+	MER103C	DNA/hAT-Charlie	1	89	(208)	2142457
292	23.5	10.5	0.0	chr2	159982500	159982584	(82210945)	+	MER103C	DNA/hAT-Charlie	142	236	(61)	2142458
278	27.6	2.8	11.0	chr2	163642631	163642748	(78550781)	+	L2a	LINE/L2	3274	3420	(6)	2147243
2082	25.1	7.4	3.2	chr2	165825013	165825620	(76367909)	C	HAL1	LINE/L1	(658)	1849	1228	2150186
807	24.8	6.8	0.5	chr2	165952728	165952946	(76240583)	+	L2a	LINE/L2	3193	3426	(0)	2150386
365	25.4	10.6	0.0	chr2	165952968	165953077	(76240452)	+	L2a	LINE/L2	3302	3424	(2)	2150387
36	0.0	0.0	0.0	chr2	165953652	165953685	(76239844)	+	(CCCGCTCA)n	Simple_repeat	1	34	(0)	2150388
4935	24.2	6.8	5.2	chr2	168488391	168490564	(73702965)	C	L1MC2	LINE/L1	(3824)	2322	124	2153629
202	29.8	12.3	3.9	chr2	168575091	168575234	(73618295)	+	MIR	SINE/MIR	67	228	(34)	2153769
181	5.7	14.6	0.0	chr2	168890026	168890060	(73303469)	+	MIR3	SINE/MIR	106	146	(62)	2154227
1157	17.0	1.9	0.0	chr2	169073887	169074098	(73119431)	+	MER20	DNA/hAT-Charlie	1	216	(3)	2154462
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
12	9.8	0.0	11.9	chr2	170771318	170771359	(71422170)	+	(GGCCCCG)n	Simple_repeat	1	42	(0)	2157213
16	19.1	2.2	2.2	chr2	170816497	170816541	(71376988)	+	G-rich	Low_complexity	1	46	(0)	2157297
14	26.1	2.9	4.2	chr2	172084655	172084723	(70108806)	+	GA-rich	Low_complexity	1	71	(0)	2159581
806	19.7	7.2	0.7	chr2	173935099	173935240	(68258289)	+	FRAM	SINE/Alu	1	152	(24)	2162402
14	15.0	5.4	0.0	chr2	174248642	174248678	(67944851)	+	(GCCCC)n	Simple_repeat	1	39	(0)	2162948
18	31.8	0.0	0.0	chr2	174336898	174336959	(67856570)	+	(CGC)n	Simple_repeat	1	62	(0)	2163103
680	23.1	10.1	0.3	chr2	175805515	175805712	(66387817)	+	MIR	SINE/MIR	49	258	(4)	2165252
62	21.4	7.7	2.5	chr2	176106239	176106499	(66087030)	+	GA-rich	Low_complexity	1	281	(0)	2165663
20	16.4	5.9	4.2	chr2	176106847	176106915	(66086614)	+	(TCC)n	Simple_repeat	1	70	(0)	2165664
15	11.9	0.0	9.1	chr2	176106942	176106985	(66086544)	+	(GCGG)n	Simple_repeat	1	44	(0)	2165665
13	21.9	0.0	7.3	chr2	176106994	176107048	(66086481)	+	(GCGGCCA)n	Simple_repeat	1	55	(0)	2165666
20	17.4	6.5	1.5	chr2	176529434	176529495	(65664034)	+	(TCTTTC)n	Simple_repeat	1	66	(0)	2166276
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
325	12.7	20.2	2.5	chr2	178301907	178301987	(63891542)	+	MLT1A1	LTR/ERVL-MaLR	247	345	(63)	2168910
202	29.2	2.8	8.6	chr2	178315772	178315887	(63877642)	C	MER5A	DNA/hAT-Charlie	(75)	114	6	2168931
1416	16.0	3.8	8.8	chr2	178482266	178482571	(63710958)	+	AluJo	SINE/Alu	12	301	(11)	2169157
16128	17.8	5.9	4.6	chr2	180032933	180035021	(62158508)	C	L1MA2	LINE/L1	(2452)	2146	9	2170972
679	22.1	1.9	2.5	chr2	183004078	183004239	(59189290)	+	MER5A1	DNA/hAT-Charlie	1	161	(5)	2174759
2085	15.5	0.0	0.3	chr2	186570519	186570828	(55622701)	C	AluJb	SINE/Alu	(3)	309	1	2179233
301	36.2	7.2	3.4	chr2	186570839	186570984	(55622545)	C	MIRb	SINE/MIR	(112)	156	5	2179234
1257	29.7	9.2	0.2	chr2	189829271	189829705	(52363824)	+	L2a	LINE/L2	897	1374	(2045)	2183447
882	16.9	5.8	1.1	chr2	190315324	190315503	(51878026)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2184160
452	24.5	7.5	1.2	chr2	190467173	190467333	(51726196)	C	MER5B	DNA/hAT-Charlie	(0)	178	7	2184421
14	27.1	0.0	0.0	chr2	190896529	190896572	(51296957)	+	(TTTGT)n	Simple_repeat	1	44	(0)	2185092
14	11.6	0.0	3.3	chr2	196068164	196068193	(46125336)	+	(GTATA)n	Simple_repeat	1	30	(0)	2191847
13	19.8	0.0	2.7	chr2	196068194	196068200	(46125329)	+	(GTATG)n	Simple_repeat	1	37	(0)	2191848
302	35.9	2.0	6.2	chr2	196068201	196068411	(46125118)	C	MIRc	SINE/MIR	(63)	205	4	2191849
6109	17.8	7.8	5.3	chr2	196852388	196853938	(45339591)	+	MER101-int	LTR/ERV1	1721	3492	(3147)	2192996
242	25.0	0.0	0.0	chr2	197452973	197453024	(44740505)	C	MIRc	SINE/MIR	(64)	204	153	2194055
265	34.5	3.2	2.2	chr2	197613541	197613632	(44579897)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3719	2194367
209	30.9	7.9	6.8	chr2	197613662	197613824	(44579705)	C	MamGypsy2-LTR	LTR/Gypsy	(16)	167	3	2194368
183	34.5	8.1	4.2	chr2	197613847	197613964	(44579565)	C	MamRTE1	LINE/RTE-BovB	(3328)	484	362	2194367
682	27.0	12.0	4.0	chr2	197822184	197822480	(44371049)	C	L3	LINE/CR1	(23)	4076	3753	2194638
887	18.7	5.2	2.1	chr2	197822500	197822685	(44370844)	C	MIR	SINE/MIR	(3)	259	68	2194639
273	34.4	6.0	5.4	chr2	197822682	197822847	(44370682)	C	L3	LINE/CR1	(447)	3652	3486	2194638
14	11.8	7.7	2.4	chr2	199457621	199457659	(42735870)	+	GA-rich	Low_complexity	1	42	(0)	2196846
17	13.3	0.0	2.9	chr2	199457723	199457757	(42735772)	+	(CGG)n	Simple_repeat	1	35	(0)	2196847
268	27.8	9.1	15.1	chr2	200406058	200406163	(41787366)	C	L2a	LINE/L2	(2)	3424	3287	2198284
14	18.0	8.0	0.0	chr2	200526339	200526388	(41667141)	+	(TCCGGCC)n	Simple_repeat	1	54	(0)	2198471
850	9.2	1.6	0.0	chr2	200864998	200865128	(41328401)	+	FLAM_C	SINE/Alu	6	131	(2)	2199013
306	29.9	3.3	2.5	chr2	200966993	200967112	(41226417)	+	HAL1	LINE/L1	559	679	(1828)	2199245
382	14.2	4.1	2.4	chr2	201232110	201232223	(40961306)	C	LTR41C	LTR/ERVL	(6)	752	609	2199793
825	20.3	12.5	5.8	chr2	201232239	201232551	(40960978)	C	LTR41C	LTR/ERVL	(364)	337	1	2199793
414	32.0	6.9	0.5	chr2	202010245	202010433	(40183096)	C	MIR3	SINE/MIR	(5)	203	2	2201025
666	22.4	0.0	0.0	chr2	202010461	202010585	(40182944)	+	MER58B	DNA/hAT-Charlie	217	341	(0)	2201026
9610	19.7	6.3	7.5	chr2	202807037	202809367	(39384162)	+	L1M1	LINE/L1	16	2419	(5146)	2202730
226	34.6	0.0	16.1	chr2	205610601	205610724	(36582805)	C	L2b	LINE/L2	(16)	3359	3256	2207167
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
21	19.8	0.0	0.0	chr2	205682634	205682679	(36510850)	+	(CAG)n	Simple_repeat	1	46	(0)	2207283
654	29.5	5.3	7.6	chr2	206230450	206230819	(35962710)	+	LTR88c	LTR/Gypsy?	4	364	(498)	2208273
17	15.3	0.0	0.0	chr2	209476384	209476412	(32717117)	+	(T)n	Simple_repeat	1	29	(0)	2213086
276	29.0	18.9	1.1	chr2	212005440	212005617	(30187912)	C	L2c	LINE/L2	(133)	3254	3038	2216360
601	33.3	3.8	1.7	chr2	212180950	212181184	(30012345)	C	MIR	SINE/MIR	(22)	240	1	2216610
16	24.5	3.7	0.0	chr2	215834197	215834250	(26359279)	+	(TATAA)n	Simple_repeat	1	56	(0)	2221701
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
265	31.0	14.7	8.7	chr2	216682257	216682567	(25510962)	+	L3b	LINE/CR1	4718	5050	(182)	2223235
23619	9.6	1.2	1.1	chr2	216746027	216752025	(25441504)	+	L1PB1	LINE/L1	846	6866	(1)	2223361
227	22.1	18.1	0.0	chr2	218287171	218287238	(23906291)	C	MIR3	SINE/MIR	(14)	194	112	2225773
231	35.1	8.7	2.9	chr2	219003334	219003506	(23190023)	C	MIRb	SINE/MIR	(31)	237	54	2227184
12	22.1	0.0	0.0	chr2	219176901	219176932	(23016597)	+	(TGCC)n	Simple_repeat	1	32	(0)	2227457
14	16.4	2.9	0.0	chr2	219176946	219176979	(23016550)	+	(CGCCCT)n	Simple_repeat	1	35	(0)	2227458
10838	8.8	5.3	3.3	chr2	219200448	219201991	(22991538)	C	LTR12C	LTR/ERV1	(0)	1579	3	2227518
1718	15.7	2.6	1.6	chr2	219685183	219685512	(22508017)	+	MER61B	LTR/ERV1	1	427	(0)	2228329
3641	16.9	3.5	0.0	chr2	219852614	219853252	(22340277)	C	L1MB3	LINE/L1	(0)	6183	5522	2228600
15	0.0	0.0	0.0	chr2	221001677	221001693	(21191836)	+	(AC)n	Simple_repeat	1	17	(0)	2230375
776	26.0	4.1	0.8	chr2	222882158	222882394	(19311135)	C	HAL1	LINE/L1	(791)	1716	1472	2233399
1660	15.7	13.3	4.8	chr2	222882396	222882704	(19310825)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2233400
532	10.1	3.7	0.0	chr2	223958649	223958726	(18234803)	+	MER2	DNA/TcMar-Tigger	169	249	(96)	2235183
1080	14.7	9.2	0.0	chr2	223958727	223958923	(18234606)	C	Tigger1a_Art	DNA/TcMar-Tigger	(0)	497	281	2235184
485	15.2	28.1	5.3	chr2	223958913	223959040	(18234489)	C	Tigger1a_Art	DNA/TcMar-Tigger	(340)	157	1	2235184
2415	18.6	4.8	6.0	chr2	224563529	224564005	(17629524)	+	Tigger7	DNA/TcMar-Tigger	1	483	(2008)	2236129
14	10.8	2.0	10.0	chr2	224585798	224585846	(17607683)	+	G-rich	Low_complexity	1	50	(0)	2236173
803	31.0	9.2	3.8	chr2	224642279	224643129	(17550400)	C	L2a	LINE/L2	(0)	3426	2540	2236285
1845	14.6	9.1	0.0	chr2	224668230	224668559	(17524970)	+	MLT1C	LTR/ERVL-MaLR	102	464	(3)	2236337
368	26.2	12.5	2.3	chr2	224668560	224668688	(17524841)	C	MIRc	SINE/MIR	(113)	155	12	2236338
698	25.0	6.5	3.0	chr2	224848463	224848690	(17344839)	+	MIRb	SINE/MIR	9	241	(27)	2236649
461	27.8	8.6	5.9	chr2	227052927	227053129	(15140400)	+	MER63A	DNA/hAT-Blackjack	2	210	(0)	2239848
641	9.9	0.0	0.0	chr2	229731976	229732054	(12461475)	+	LTR1C3	LTR/ERV1	1	79	(559)	2244008
656	7.4	0.0	0.0	chr2	229732055	229732133	(12461396)	+	LTR1C3	LTR/ERV1	1	79	(559)	2244008
631	9.1	0.0	0.0	chr2	229732134	229732210	(12461319)	+	LTR1C3	LTR/ERV1	1	77	(561)	2244008
12	0.0	5.3	0.0	chr2	229921957	229921975	(12271554)	+	(GCG)n	Simple_repeat	1	20	(0)	2244313
2480	7.4	0.0	0.3	chr2	230824871	230825179	(11368350)	+	AluSp	SINE/Alu	1	308	(5)	2245745
16	20.2	5.3	5.1	chr2	230864784	230864858	(11328671)	+	(GGCGC)n	Simple_repeat	1	79	(0)	2245826
15	16.9	0.0	0.0	chr2	230865085	230865117	(11328412)	+	(GGCGTC)n	Simple_repeat	1	33	(0)	2245827
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
7883	23.7	5.6	1.9	chr2	232471435	232474484	(9719045)	C	L1MA8	LINE/L1	(3791)	3774	835	2248712
16	17.7	3.5	5.1	chr2	232487522	232487578	(9705951)	+	(CGAGCCC)n	Simple_repeat	1	59	(0)	2248732
33	2.9	0.0	0.0	chr2	232487582	232487616	(9705913)	+	(AGCCGC)n	Simple_repeat	1	35	(0)	2248733
1314	19.1	11.7	4.8	chr2	234156471	234156883	(8036646)	+	LTR56	LTR/ERV1	1	445	(0)	2251461
1107	26.1	4.6	0.8	chr2	236078075	236078478	(6115051)	C	MLT2C1	LTR/ERVL	(37)	427	5	2254476
215	33.3	2.2	2.2	chr2	237421535	237421623	(4771906)	C	L2a	LINE/L2	(1)	3425	3337	2256323
241	27.8	8.5	2.7	chr2	237421795	237421905	(4771624)	+	HAL1	LINE/L1	276	393	(2114)	2256324
306	28.8	6.3	13.6	chr2	237642300	237642830	(4550699)	+	L1M3e	LINE/L1	1147	1636	(5394)	2256646
442	26.5	0.7	4.2	chr2	237726503	237726644	(4466885)	C	MIRb	SINE/MIR	(41)	227	91	2256775
14	33.7	1.4	0.0	chr20	324166	324235	(64119932)	+	(CCCCGCC)n	Simple_repeat	1	71	(0)	2262661
272	30.8	5.7	4.1	chr20	380709	380745	(64063422)	C	MIRb	SINE/MIR	(163)	105	73	2262812
233	18.6	0.0	0.0	chr20	406737	406779	(64037388)	C	MER5B	DNA/hAT-Charlie	(135)	43	1	2262878
1192	29.1	12.5	1.7	chr20	406838	407578	(64036589)	C	L2a	LINE/L2	(0)	3426	2581	2262879
245	32.2	11.9	1.7	chr20	407651	407824	(64036343)	+	MIRb	SINE/MIR	3	196	(72)	2262880
309	15.8	1.9	0.2	chr20	561963	562020	(63882147)	C	AluY	SINE/Alu	(248)	53	1	2263189
325	31.7	6.6	0.7	chr20	562072	562214	(63881953)	C	MIRb	SINE/MIR	(93)	175	24	2263190
13	19.9	2.3	4.4	chr20	1392999	1393042	(63051125)	+	(GGC)n	Simple_repeat	1	45	(0)	2264924
16	26.7	2.9	4.3	chr20	1393093	1393160	(63051007)	+	(GC)n	Simple_repeat	1	70	(0)	2264925
2855	18.1	4.9	2.9	chr20	1457307	1457960	(62986207)	C	L1MA7	LINE/L1	(4)	6287	5620	2265036
1035	0.0	0.0	0.9	chr20	2352089	2352201	(62091966)	+	AluYc	SINE/Alu	186	297	(2)	2266797
252	28.1	4.2	2.6	chr20	2402643	2402759	(62041408)	+	MIRb	SINE/MIR	43	161	(107)	2266898
433	32.7	11.9	4.6	chr20	2402803	2403190	(62040977)	+	L2c	LINE/L2	2951	3370	(17)	2266899
2489	21.4	9.1	4.4	chr20	2451819	2452438	(61991729)	C	LTR41	LTR/ERVL	(105)	663	3	2266997
569	23.0	0.8	0.0	chr20	2743431	2743556	(61700611)	C	LTR37B	LTR/ERV1	(0)	468	342	2267519
245	33.8	3.8	9.5	chr20	2874689	2874940	(61569227)	+	L2	LINE/L2	2800	3036	(383)	2267734
2301	6.4	0.3	7.4	chr20	3160066	3160391	(61283776)	+	AluSx	SINE/Alu	3	305	(7)	2268330
2604	20.5	4.0	1.1	chr20	3420363	3420894	(61023273)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2268814
657	30.2	6.6	1.8	chr20	3636576	3636804	(60807363)	C	MIR	SINE/MIR	(0)	262	22	2269235
217	27.8	6.7	3.0	chr20	3846434	3846533	(60597634)	C	L2c	LINE/L2	(11)	3376	3273	2269630
239	32.9	0.0	0.0	chr20	4512864	4512933	(59931234)	C	L2a	LINE/L2	(0)	3426	3357	2270854
947	18.9	6.4	0.0	chr20	8414651	8414840	(56029327)	+	MER3	DNA/hAT-Charlie	6	208	(1)	2277220
578	20.5	0.8	0.0	chr20	8414871	8414987	(56029180)	+	MER5A1	DNA/hAT-Charlie	49	166	(0)	2277221
206	32.8	3.8	8.1	chr20	10172558	10172706	(54271461)	+	L2a	LINE/L2	3243	3406	(20)	2280104
725	27.2	4.5	0.0	chr20	11895834	11896065	(52548102)	C	HAL1	LINE/L1	(2262)	245	3	2282689
424	30.8	15.5	6.7	chr20	11896124	11896724	(52547443)	C	L1MC	LINE/L1	(1577)	4569	3906	2282688
22	21.3	6.6	0.0	chr20	13995559	13995634	(50448533)	+	(GGCGAGC)n	Simple_repeat	1	81	(0)	2285791
967	30.1	6.0	3.8	chr20	21113122	21113434	(43330733)	+	LTR16C	LTR/ERVL	167	489	(0)	2296612
328	26.6	4.3	1.6	chr20	21113436	21113528	(43330639)	C	MIR3	SINE/MIR	(104)	104	17	2296615
2112	16.0	7.2	0.3	chr20	23660736	23661123	(40783044)	C	LTR23	LTR/ERV1	(10)	427	11	2299984
1052	25.1	11.0	0.0	chr20	25237899	25238221	(39205946)	C	L1ME3	LINE/L1	(252)	5910	5548	2301882
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
307	28.7	4.4	5.8	chr20	31442173	31442309	(33001858)	C	LTR81A	LTR/Gypsy	(138)	1212	1078	2305947
738	29.3	8.5	4.5	chr20	31442354	31442596	(33001571)	C	L2a	LINE/L2	(5)	3421	3181	2305948
1632	16.1	14.1	2.4	chr20	31571459	31571673	(32872494)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	178	2306290
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
501	27.2	3.6	1.8	chr20	31666979	31667143	(32777024)	C	MIRb	SINE/MIR	(51)	217	50	2306574
16	21.1	0.0	0.0	chr20	31723838	31723875	(32720292)	+	(GCCT)n	Simple_repeat	1	38	(0)	2306714
26	13.3	3.3	3.2	chr20	31724106	31724166	(32720001)	+	(TCAG)n	Simple_repeat	1	63	(0)	2306715
645	28.4	1.6	4.5	chr20	32271031	32271044	(32173123)	C	MIRb	SINE/MIR	(47)	221	208	2308069
1752	17.9	3.2	0.0	chr20	32271045	32271359	(32172808)	C	AluJb	SINE/Alu	(0)	312	1	2308070
46	2.2	0.0	0.0	chr20	32277699	32277744	(32166423)	+	(CGC)n	Simple_repeat	1	46	(0)	2308087
12	14.1	3.0	2.9	chr20	32506844	32506876	(31937291)	+	GA-rich	Low_complexity	1	34	(0)	2308568
304	18.0	5.3	0.0	chr20	32742199	32742287	(31701880)	+	MER33	DNA/hAT-Charlie	227	320	(4)	2309171
487	26.2	6.9	1.3	chr20	33134695	33134845	(31309322)	C	MER104	DNA/TcMar-Tc2	(21)	160	1	2310028
254	30.8	10.2	6.5	chr20	33828573	33828742	(30615425)	+	MIRc	SINE/MIR	77	253	(15)	2311714
482	19.5	6.1	0.8	chr20	33828775	33828898	(30615269)	C	L1ME3	LINE/L1	(1)	6161	6031	2311715
259	34.0	11.9	2.9	chr20	33828998	33829203	(30614964)	C	L2b	LINE/L2	(2)	3373	3147	2311716
895	24.7	14.6	5.7	chr20	34083114	34083499	(30360668)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	120	2312283
427	31.4	4.4	1.1	chr20	34083551	34083727	(30360440)	+	MER117	DNA/hAT-Charlie	15	197	(0)	2312284
182	29.0	9.3	2.7	chr20	34515487	34515596	(29928571)	C	MIR1_Amn	SINE/MIR	(78)	152	35	2313238
293	35.8	8.8	0.7	chr20	35309779	35309913	(29134254)	C	L2c	LINE/L2	(5)	3421	3268	2314980
2451	6.8	1.0	0.0	chr20	35616634	35616929	(28827238)	C	AluSp	SINE/Alu	(14)	299	1	2315686
518	28.3	6.0	1.1	chr20	36886820	36887008	(27557159)	C	L2a	LINE/L2	(519)	2900	2702	2318696
225	22.0	18.0	4.2	chr20	38110465	38110559	(26333608)	+	L3	LINE/CR1	3922	4032	(67)	2321401
340	19.9	48.6	0.0	chr20	38993118	38993220	(25450947)	+	MIR	SINE/MIR	4	156	(106)	2323297
3022	10.5	1.3	1.1	chr20	41058882	41059332	(23384835)	+	L1PA13	LINE/L1	5710	6161	(2)	2326980
327	29.7	6.9	9.8	chr20	41059333	41059394	(23384773)	+	L1ME2	LINE/L1	4922	4968	(1178)	2326979
56	0.0	0.0	0.0	chr20	41059410	41059459	(23384708)	+	(AAAT)n	Simple_repeat	1	50	(0)	2326981
533	23.7	0.0	0.0	chr20	41059467	41059563	(23384604)	+	FLAM_A	SINE/Alu	8	104	(38)	2326982
2217	7.4	0.3	1.4	chr20	41147569	41147865	(23296302)	+	AluSg7	SINE/Alu	1	294	(15)	2327106
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
511	28.5	9.3	0.5	chr20	43939654	43939840	(20504327)	+	MIRb	SINE/MIR	47	251	(17)	2332303
380	27.6	1.0	3.0	chr20	44015826	44015926	(20428241)	+	MER131	DNA?	22	120	(95)	2332468
547	23.8	29.8	5.2	chr20	44465012	44465338	(19978829)	C	LTR16A1	LTR/ERVL	(13)	443	34	2333584
993	26.6	5.5	1.0	chr20	44465451	44465746	(19978421)	C	LTR78	LTR/ERV1	(4)	1300	991	2333585
1315	23.9	1.0	0.0	chr20	44728682	44728974	(19715193)	C	L1ME2	LINE/L1	(2)	6162	5867	2334199
240	21.5	15.6	0.0	chr20	44728975	44729039	(19715128)	C	LTR33A	LTR/ERVL	(48)	483	407	2334200
630	29.9	8.1	0.4	chr20	44729068	44729329	(19714838)	C	LTR33A	LTR/ERVL	(161)	359	76	2334200
577	31.5	12.6	0.6	chr20	44960570	44960882	(19483285)	C	L2a	LINE/L2	(54)	3372	3017	2334744
270	9.5	8.7	0.0	chr20	45018036	45018077	(19426090)	+	MIR	SINE/MIR	183	228	(34)	2334861
29	0.0	0.0	0.0	chr20	45018203	45018229	(19425938)	+	(GTT)n	Simple_repeat	1	27	(0)	2334862
307	23.0	2.1	1.2	chr20	45373514	45373615	(19070552)	+	MIRc	SINE/MIR	22	134	(134)	2335520
15	16.6	2.3	4.4	chr20	45833754	45833818	(18610349)	+	G-rich	Low_complexity	1	63	(0)	2336326
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
2392	10.9	0.0	0.0	chr20	45990928	45991239	(18452928)	C	AluSx	SINE/Alu	(0)	312	1	2336723
1367	19.4	11.6	8.6	chr20	45991240	45991420	(18452747)	C	MLT1C	LTR/ERVL-MaLR	(295)	172	1	2336722
473	18.8	0.0	10.0	chr20	45991421	45991459	(18452708)	C	L1ME3A	LINE/L1	(93)	6080	6045	2336721
1086	15.2	1.2	0.0	chr20	45991463	45991626	(18452541)	+	AluJo	SINE/Alu	137	302	(10)	2336724
1877	15.7	0.3	2.6	chr20	46568981	46569286	(17874881)	C	AluJo	SINE/Alu	(9)	303	5	2337909
776	22.6	2.4	7.3	chr20	47329251	47329409	(17114758)	+	MER3	DNA/hAT-Charlie	1	152	(57)	2339762
2334	8.9	0.3	0.0	chr20	47329410	47329702	(17114465)	C	AluSp	SINE/Alu	(18)	295	2	2339763
20	17.9	1.9	3.6	chr20	47355015	47355076	(17089091)	+	(CAC)n	Simple_repeat	1	60	(0)	2339805
242	34.3	2.8	5.7	chr20	48621231	48621412	(15822755)	C	MIRb	SINE/MIR	(77)	191	10	2342466
544	28.0	3.7	4.1	chr20	49045573	49045840	(15398327)	C	L2b	LINE/L2	(219)	3156	2889	2343477
391	34.4	7.5	4.6	chr20	49180955	49181213	(15262954)	+	MIRb	SINE/MIR	2	268	(0)	2343757
29	0.0	0.0	3.1	chr20	49714246	49714277	(14729890)	+	(TCAT)n	Simple_repeat	1	32	(0)	2345097
2362	9.4	0.0	1.0	chr20	50150688	50150995	(14293172)	C	AluSx1	SINE/Alu	(7)	305	1	2346205
1070	28.3	5.1	2.8	chr20	50150996	50151072	(14293095)	+	L2a	LINE/L2	3322	3404	(22)	2346204
248	16.4	1.8	5.2	chr20	50151101	50151158	(14293009)	C	MIR3	SINE/MIR	(87)	121	66	2346206
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
619	30.1	11.2	6.7	chr20	50744408	50745057	(13699110)	+	L2c	LINE/L2	2730	3381	(6)	2347621
665	22.3	0.0	3.9	chr20	50790363	50790516	(13653651)	+	MER5B	DNA/hAT-Charlie	26	173	(5)	2347742
1092	25.9	9.9	11.1	chr20	51385867	51386369	(13057798)	C	FordPrefect_a	DNA/hAT-Tip100	(4)	504	9	2349044
687	30.5	7.6	3.0	chr20	51735835	51736431	(12707736)	C	L2b	LINE/L2	(0)	3375	2746	2349776
880	12.6	0.0	1.5	chr20	51736490	51736654	(12707513)	C	FLAM_C	SINE/Alu	(0)	143	1	2349777
428	30.1	10.7	2.0	chr20	51750537	51750762	(12693405)	C	MIRb	SINE/MIR	(0)	262	17	2349818
635	27.8	6.0	7.9	chr20	53610070	53610460	(10833707)	+	L1ME4c	LINE/L1	272	654	(176)	2353853
20	0.0	4.0	0.0	chr20	53611583	53611607	(10832560)	+	(AC)n	Simple_repeat	1	26	(0)	2353856
185	19.1	6.0	16.0	chr20	53611715	53611789	(10832378)	C	AmnSINE1	SINE/5S-Deu-L2	(414)	161	95	2353857
195	33.3	7.7	3.6	chr20	54149015	54149126	(10295041)	+	L2a	LINE/L2	3295	3411	(15)	2355160
342	26.7	7.2	1.7	chr20	57530631	57530748	(6913419)	C	MIRb	SINE/MIR	(46)	222	98	2361351
1243	11.4	8.7	3.2	chr20	59834832	59835048	(4609119)	C	MER30	DNA/hAT-Charlie	(0)	230	1	2365107
265	34.9	9.1	1.3	chr20	59835049	59835171	(4608996)	+	L2a	LINE/L2	3300	3425	(1)	2365106
4296	15.7	5.7	10.7	chr20	62088525	62088842	(2355325)	+	Tigger3b	DNA/TcMar-Tigger	1	290	(941)	2368103
2198	14.0	0.0	0.0	chr20	62088843	62089149	(2355018)	C	AluSz	SINE/Alu	(0)	312	6	2368104
2229	10.4	0.0	1.3	chr20	62301637	62301943	(2142224)	C	AluSz	SINE/Alu	(6)	306	4	2368406
193	43.2	0.0	1.0	chr20	62704611	62704706	(1739461)	C	MamRTE1	LINE/RTE-BovB	(3593)	219	125	2368854
13	18.4	0.0	0.0	chr20	62822810	62822840	(1621327)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	2368985
759	19.1	4.4	0.0	chr20	63628567	63628697	(815470)	+	FLAM_C	SINE/Alu	1	137	(6)	2369787
18	8.7	0.0	0.0	chr21	16420333	16420357	(30289626)	+	(T)n	Simple_repeat	1	25	(0)	2380416
504	17.2	0.0	1.1	chr21	17454673	17454759	(29255224)	C	AluSp	SINE/Alu	(13)	300	215	2381627
591	4.0	0.0	0.0	chr21	17454786	17454859	(29255124)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	2381628
391	23.2	2.4	0.0	chr21	17511981	17512062	(29197921)	C	MIRb	SINE/MIR	(30)	238	155	2381773
12	16.6	0.0	0.0	chr21	17819157	17819183	(28890800)	+	(GTCC)n	Simple_repeat	1	27	(0)	2382241
2353	10.1	2.9	0.0	chr21	26841206	26841502	(19868481)	+	AluSz	SINE/Alu	1	306	(6)	2394580
426	22.2	1.7	3.3	chr21	28824074	28824194	(17885789)	+	MER5B	DNA/hAT-Charlie	5	123	(55)	2397307
25	8.6	0.0	0.0	chr21	28824197	28824234	(17885749)	+	(TTG)n	Simple_repeat	1	38	(0)	2397308
202	20.0	0.0	0.0	chr21	28824238	28824277	(17885706)	C	MER5B	DNA/hAT-Charlie	(135)	43	4	2397309
184	29.5	1.3	9.3	chr21	28824325	28824410	(17885573)	C	L3	LINE/CR1	(1538)	2561	2483	2397310
405	20.4	4.1	0.0	chr21	28993247	28993339	(17716644)	+	MER5A1	DNA/hAT-Charlie	36	132	(34)	2397561
357	37.7	4.0	4.8	chr21	29217997	29218247	(17491736)	+	L2b	LINE/L2	3101	3349	(26)	2397961
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
295	21.8	7.1	0.0	chr21	31581079	31581156	(15128827)	+	MER5A1	DNA/hAT-Charlie	2	85	(81)	2401645
827	11.1	0.0	0.0	chr21	31581158	31581265	(15128718)	C	FLAM_A	SINE/Alu	(15)	127	20	2401646
395	28.3	9.3	0.8	chr21	32712269	32712396	(13997587)	C	MIR3	SINE/MIR	(5)	203	64	2403650
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
21	19.3	0.0	0.0	chr21	33025855	33025901	(13684082)	+	(CCCCGC)n	Simple_repeat	1	47	(0)	2404180
200	26.4	17.9	0.0	chr21	33054548	33054657	(13655326)	C	MIRc	SINE/MIR	(89)	179	46	2404221
32	8.8	0.0	0.0	chr21	33054685	33054733	(13655250)	+	(ACTGTTCCAG)n	Simple_repeat	1	49	(0)	2404222
17	17.0	2.0	3.9	chr21	33543503	33543552	(13166431)	+	(CCTCCG)n	Simple_repeat	1	51	(0)	2405206
2313	8.9	0.3	1.6	chr21	36989315	36989628	(9720355)	C	AluSq2	SINE/Alu	(3)	310	1	2410804
15	24.4	2.1	0.0	chr21	36989779	36989826	(9720157)	+	G-rich	Low_complexity	1	49	(0)	2410805
13	10.7	3.1	3.0	chr21	38990198	38990229	(7719754)	+	GA-rich	Low_complexity	1	33	(0)	2413824
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
191	21.1	12.6	6.2	chr21	39660217	39660312	(7049671)	C	MIR3	SINE/MIR	(2)	206	104	2414972
11	15.7	6.5	4.1	chr21	41168695	41168740	(5541243)	+	G-rich	Low_complexity	1	49	(0)	2417065
20	18.3	0.0	0.0	chr21	41168979	41169015	(5540968)	+	(C)n	Simple_repeat	1	37	(0)	2417066
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
429	26.5	10.7	4.3	chr22	17170887	17171143	(33647325)	+	L1ME4b	LINE/L1	637	908	(1869)	2428365
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
278	22.0	8.9	3.5	chr22	17431321	17431405	(33387063)	+	MIRb	SINE/MIR	145	234	(34)	2428988
650	14.5	19.3	0.0	chr22	17637834	17637971	(33180497)	C	L1MB8	LINE/L1	(6)	6172	6002	2429426
282	27.8	8.3	4.6	chr22	18057832	18057982	(32760486)	+	Plat_L3	LINE/CR1	3031	3187	(399)	2430142
482	23.8	20.5	3.8	chr22	19115944	19116153	(31702315)	C	MIR	SINE/MIR	(7)	255	2	2431471
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
2286	12.2	0.0	0.0	chr22	19317024	19317327	(31501141)	+	AluSz	SINE/Alu	5	308	(4)	2431795
47	27.5	3.6	3.9	chr22	19431483	19431707	(31386761)	+	(GCC)n	Simple_repeat	1	233	(0)	2431996
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
220	33.0	1.8	8.9	chr22	20906837	20906959	(29911509)	+	MER5B	DNA/hAT-Charlie	61	174	(4)	2434189
293	35.0	11.2	5.9	chr22	21666391	21666528	(29151940)	+	L2	LINE/L2	1672	1813	(1606)	2435647
241	32.1	5.4	0.9	chr22	23781684	23781790	(27036678)	C	MIRb	SINE/MIR	(121)	147	36	2438956
12	28.0	2.3	0.0	chr22	23894956	23894999	(26923469)	+	(CGCGG)n	Simple_repeat	1	45	(0)	2439164
3812	24.0	5.9	2.1	chr22	24026350	24027505	(26790963)	C	L1MD	LINE/L1	(945)	5201	3995	2439392
1962	21.2	2.3	1.8	chr22	24027506	24027899	(26790569)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2439393
2293	21.2	6.3	2.4	chr22	24578647	24579196	(26239272)	C	MER74B	LTR/ERVL	(0)	622	50	2440292
1076	20.2	13.2	0.9	chr22	24579197	24579540	(26238928)	+	L1ME1	LINE/L1	608	1000	(5400)	2440291
246	22.4	3.9	0.0	chr22	24727227	24727275	(26091193)	+	MLT1E2	LTR/ERVL-MaLR	93	143	(510)	2440540
910	28.2	13.2	1.5	chr22	24727318	24727481	(26090987)	+	MLT1E2	LTR/ERVL-MaLR	159	352	(275)	2440540
1094	23.7	13.8	4.6	chr22	24996506	24996917	(25821551)	C	LTR16A1	LTR/ERVL	(0)	456	1	2441198
260	29.2	10.3	2.3	chr22	24996918	24997050	(25821418)	+	MIR3	SINE/MIR	52	196	(12)	2441199
15	7.8	0.0	3.5	chr22	26590191	26590219	(24228249)	+	(GCCCC)n	Simple_repeat	1	29	(0)	2444696
282	26.7	0.0	0.0	chr22	26635177	26635248	(24183220)	+	L2b	LINE/L2	3014	3088	(338)	2444806
514	20.1	2.5	13.1	chr22	26635344	26635428	(24183040)	C	MER106B	DNA/hAT-Charlie	(1)	1058	983	2444813
941	14.2	0.0	0.0	chr22	26635429	26635555	(24182913)	C	FLAM_C	SINE/Alu	(16)	127	1	2444814
285	35.5	4.1	0.0	chr22	27045459	27045551	(23772917)	C	L2b	LINE/L2	(18)	3357	3261	2445785
11	25.6	0.0	4.3	chr22	27802093	27802138	(23016330)	+	G-rich	Low_complexity	1	46	(0)	2447537
532	33.1	14.8	1.4	chr22	27919975	27920411	(22898057)	C	L2b	LINE/L2	(31)	3344	2838	2447728
1976	16.1	5.7	10.5	chr22	28712802	28713357	(22105111)	C	L1MB5	LINE/L1	(14)	6160	5694	2448995
258	30.5	10.5	4.9	chr22	28750324	28750485	(22067983)	C	MIRc	SINE/MIR	(35)	173	2	2449101
301	24.2	0.0	0.0	chr22	28750509	28750570	(22067898)	+	MIR3	SINE/MIR	29	90	(118)	2449102
394	27.2	14.9	2.7	chr22	28793993	28794215	(22024253)	C	MIR	SINE/MIR	(1)	261	7	2449221
223	17.8	4.2	0.0	chr22	28794286	28794330	(22024138)	+	MIRc	SINE/MIR	55	101	(167)	2449222
789	13.8	17.4	1.9	chr22	28937551	28937705	(21880763)	C	MER5A	DNA/hAT-Charlie	(5)	184	1	2449598
294	24.6	0.0	1.5	chr22	28937719	28937784	(21880684)	C	L1ME4a	LINE/L1	(74)	6050	5986	2449599
25	9.8	0.0	4.2	chr22	29031030	29031077	(21787391)	+	(CCCTGC)n	Simple_repeat	1	48	(0)	2449755
522	33.3	7.1	6.9	chr22	29104954	29105221	(21713247)	C	L2c	LINE/L2	(10)	3377	3115	2449891
496	21.2	11.5	0.0	chr22	29105222	29105367	(21713101)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	2449892
522	33.3	7.1	6.9	chr22	29105368	29105463	(21713005)	C	L2c	LINE/L2	(273)	3114	3011	2449891
52	2.1	0.0	0.0	chr22	29105464	29105512	(21712956)	+	(CA)n	Simple_repeat	1	49	(0)	2449893
55	0.0	0.0	0.0	chr22	29303765	29303811	(21514657)	+	(GT)n	Simple_repeat	1	47	(0)	2450295
2222	6.7	0.0	2.5	chr22	29303812	29304095	(21514373)	C	AluY	SINE/Alu	(33)	278	2	2450296
287	24.8	10.6	0.0	chr22	29581240	29581340	(21237128)	+	MIR3	SINE/MIR	43	155	(53)	2450910
2520	5.2	0.0	0.0	chr22	29581355	29581661	(21236807)	C	AluY	SINE/Alu	(4)	307	1	2450911
1936	13.4	4.9	0.3	chr22	29622954	29623243	(21195225)	C	AluJo	SINE/Alu	(7)	305	2	2451016
2123	9.0	5.0	0.3	chr22	29992079	29992366	(20826102)	C	AluSp	SINE/Alu	(11)	302	1	2451775
252	28.9	10.2	6.1	chr22	30592487	30592514	(20225954)	+	MamRep4096	DNA/hAT-Tip100	101	130	(296)	2452962
2368	9.5	0.0	0.0	chr22	30592515	30592818	(20225650)	+	AluSx	SINE/Alu	1	304	(8)	2452963
409	27.3	0.0	6.0	chr22	31754208	31754324	(19064144)	+	MIR3	SINE/MIR	37	146	(62)	2455539
3206	25.1	6.8	5.5	chr22	32203087	32206587	(18611881)	C	REP522	Satellite/telo	(94)	3546	1	2456556
750	25.0	11.7	2.2	chr22	32448962	32449186	(18369282)	C	MIR	SINE/MIR	(10)	252	4	2456983
188	20.0	0.0	0.0	chr22	32449234	32449268	(18369200)	+	MIRc	SINE/MIR	79	113	(155)	2456984
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
244	24.3	1.3	2.6	chr22	33917939	33918014	(16900454)	C	UCON6	Unknown	(91)	346	272	2460043
23	20.5	7.0	2.8	chr22	35540433	35540532	(15277936)	+	G-rich	Low_complexity	1	107	(0)	2463256
14	9.3	0.0	0.0	chr22	35540734	35540756	(15277712)	+	(AGG)n	Simple_repeat	1	23	(0)	2463257
442	33.7	19.6	1.3	chr22	35621502	35621808	(15196660)	C	L3	LINE/CR1	(1)	4098	3722	2463452
15	5.6	0.0	0.0	chr22	35894979	35894997	(14923471)	+	(A)n	Simple_repeat	1	19	(0)	2463926
17	12.8	0.0	2.8	chr22	35895042	35895077	(14923391)	+	(TCCC)n	Simple_repeat	1	36	(0)	2463927
32	3.2	0.0	0.0	chr22	35895078	35895109	(14923359)	+	(CT)n	Simple_repeat	1	32	(0)	2463928
940	18.5	6.7	0.0	chr22	35904794	35904988	(14913480)	C	MER3	DNA/hAT-Charlie	(0)	209	1	2463945
316	27.2	11.8	4.3	chr22	35904991	35905201	(14913267)	+	Tigger15a	DNA/TcMar-Tigger	51	279	(436)	2463946
324	28.3	13.1	0.0	chr22	36355635	36355747	(14462721)	C	MIRb	SINE/MIR	(50)	212	83	2464814
13	15.9	0.0	0.0	chr22	36481469	36481496	(14336972)	+	(CCGC)n	Simple_repeat	1	28	(0)	2465156
267	36.2	10.5	3.6	chr22	37021812	37022006	(13796462)	C	MIRb	SINE/MIR	(42)	226	17	2466331
513	27.5	13.2	1.2	chr22	37904995	37905167	(12913301)	C	MIRb	SINE/MIR	(52)	216	20	2468376
13	8.5	4.0	0.0	chr22	37905914	37905938	(12912530)	+	(GGC)n	Simple_repeat	1	26	(0)	2468378
50	0.0	0.0	0.0	chr22	38180141	38180183	(12638285)	+	(AC)n	Simple_repeat	1	43	(0)	2468969
185	34.5	13.4	0.8	chr22	38180340	38180456	(12638012)	+	MIRb	SINE/MIR	43	176	(92)	2468970
1096	30.9	12.3	1.9	chr22	38200999	38201741	(12616727)	C	L2a	LINE/L2	(228)	3198	2244	2469021
18	20.2	3.9	0.0	chr22	38499191	38499241	(12319227)	+	A-rich	Low_complexity	1	53	(0)	2469624
14	4.9	0.0	0.0	chr22	38570451	38570471	(12247997)	+	(GAGG)n	Simple_repeat	1	21	(0)	2469801
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
447	30.2	16.2	0.5	chr22	38697631	38697843	(12120625)	+	MIR	SINE/MIR	6	258	(4)	2470128
495	29.6	12.9	1.0	chr22	38706962	38707166	(12111302)	+	MIR	SINE/MIR	20	252	(10)	2470145
607	27.0	3.2	0.0	chr22	38870176	38870327	(11948141)	+	MIRb	SINE/MIR	86	242	(26)	2470435
2927	28.6	8.4	3.4	chr22	38924292	38925466	(11893002)	C	Charlie25	DNA/hAT-Charlie	(987)	1537	299	2470543
13	14.7	3.3	0.0	chr22	39520440	39520469	(11297999)	+	G-rich	Low_complexity	1	31	(0)	2471815
316	27.2	13.6	1.5	chr22	39524718	39524973	(11293495)	+	L2a	LINE/L2	2932	3393	(33)	2471822
222	34.0	5.7	0.0	chr22	39525011	39525110	(11293358)	C	MIR	SINE/MIR	(45)	217	112	2471823
848	26.0	10.1	6.3	chr22	40651456	40651837	(10166631)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	197	2474016
795	21.1	13.0	5.9	chr22	40666519	40666911	(10151557)	+	LTR56	LTR/ERV1	43	445	(0)	2474056
1735	13.8	0.0	12.7	chr22	40711464	40711683	(10106785)	+	AluJr4	SINE/Alu	123	303	(9)	2474168
257	27.6	18.1	1.6	chr22	40711687	40711870	(10106598)	+	LTR81A	LTR/Gypsy	933	1153	(0)	2474166
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
210	27.4	8.8	0.0	chr22	41204980	41205041	(9613427)	+	L2a	LINE/L2	3357	3424	(2)	2475377
567	31.6	15.0	1.7	chr22	41491285	41491687	(9326781)	+	L3	LINE/CR1	1991	2456	(1643)	2476038
499	30.5	13.1	1.7	chr22	41491692	41491921	(9326547)	C	MIR	SINE/MIR	(1)	261	2	2476040
489	21.9	5.4	3.1	chr22	41687708	41687834	(9130634)	C	MIRb	SINE/MIR	(18)	250	121	2476516
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
307	33.1	3.6	1.5	chr22	41918283	41918417	(8900051)	C	MIRb	SINE/MIR	(120)	148	11	2477051
2145	11.1	0.0	2.0	chr22	41918553	41918720	(8899748)	C	AluSx1	SINE/Alu	(12)	300	137	2477052
296	28.7	4.7	0.0	chr22	41976364	41976464	(8842004)	C	MIRc	SINE/MIR	(124)	144	39	2477184
2090	5.6	0.4	3.0	chr22	42089932	42090197	(8728271)	+	AluY	SINE/Alu	34	292	(19)	2477407
277	25.5	9.7	2.9	chr22	42090223	42090327	(8728141)	+	MIR1_Amn	SINE/MIR	38	150	(80)	2477408
2593	5.6	0.0	0.0	chr22	42868075	42868378	(7950090)	C	AluY	SINE/Alu	(7)	304	1	2479123
1075	22.0	13.7	3.7	chr22	43187850	43188009	(7630459)	C	BLACKJACK	DNA/hAT-Blackjack	(740)	2229	2079	2479780
267	34.5	10.2	4.2	chr22	46092934	46093145	(4725323)	C	MIRb	SINE/MIR	(21)	247	22	2484990
1590	20.6	9.5	3.2	chr22	46335153	46335459	(4483009)	C	MER4B	LTR/ERV1	(263)	347	2	2485393
715	21.4	1.9	0.0	chr22	50387584	50387737	(430731)	C	MER63B	DNA/hAT-Blackjack	(0)	436	280	2490590
361	26.9	11.6	0.8	chr22	50387841	50388002	(430466)	C	MIR	SINE/MIR	(35)	233	51	2490591
180	32.3	17.5	2.0	chr3	3992621	3992721	(194302838)	C	L3	LINE/CR1	(140)	3959	3840	2498287
1616	18.9	11.0	3.5	chr3	4320355	4320995	(193974564)	C	LTR48	LTR/ERV1	(2)	785	1	2498802
425	30.2	7.4	8.2	chr3	4531345	4531825	(193763734)	+	L2c	LINE/L2	2696	3162	(225)	2499174
2045	14.9	0.0	1.9	chr3	4532355	4532670	(193762889)	C	AluJb	SINE/Alu	(2)	310	1	2499178
361	27.3	12.9	5.7	chr3	4532718	4532997	(193762562)	+	L3	LINE/CR1	3755	4057	(42)	2499179
469	23.7	6.4	1.5	chr3	5002022	5002154	(193293405)	+	L1MEc	LINE/L1	694	833	(5567)	2499941
690	20.0	0.0	2.3	chr3	5002169	5002296	(193293263)	+	L2a	LINE/L2	3302	3426	(0)	2499942
191	26.9	8.5	3.6	chr3	5002286	5002397	(193293162)	C	MamTip2	DNA/hAT-Tip100	(159)	146	29	2499940
409	31.5	3.0	3.9	chr3	5016683	5016887	(193278672)	C	L2c	LINE/L2	(78)	3309	3107	2499986
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
474	27.2	4.9	2.2	chr3	8465027	8465165	(189830394)	+	MIRb	SINE/MIR	7	149	(119)	2505403
228	31.7	1.2	1.2	chr3	8506818	8506900	(189788659)	C	MIRc	SINE/MIR	(184)	84	2	2505482
247	35.9	5.9	4.8	chr3	8732235	8732503	(189563056)	+	L2c	LINE/L2	2716	2987	(432)	2505849
412	33.2	4.7	5.1	chr3	8732577	8732833	(189562726)	+	L2c	LINE/L2	3095	3350	(37)	2505849
766	24.8	7.0	8.0	chr3	8739742	8740345	(189555214)	C	MLT1F1	LTR/ERVL-MaLR	(0)	591	20	2505866
59	0.0	0.0	0.0	chr3	9141554	9141603	(189153956)	+	(GT)n	Simple_repeat	1	50	(0)	2506592
287	22.9	2.8	0.0	chr3	9142620	9142689	(189152870)	+	MIR3	SINE/MIR	54	125	(83)	2506594
472	27.9	10.5	1.3	chr3	9194592	9194747	(189100812)	C	MIR3	SINE/MIR	(22)	186	15	2506699
1062	26.0	4.4	6.5	chr3	9194824	9194970	(189100589)	+	LTR16A1	LTR/ERVL	18	159	(297)	2506700
13	17.9	2.4	4.7	chr3	9403059	9403100	(188892459)	+	GA-rich	Low_complexity	1	43	(0)	2507138
16	27.6	3.0	1.4	chr3	9649441	9649507	(188646052)	+	(GGCGGA)n	Simple_repeat	1	69	(0)	2507672
12	11.5	3.3	3.2	chr3	9649587	9649636	(188645923)	+	(GCC)n	Simple_repeat	1	50	(0)	2507673
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
201	26.7	9.6	1.3	chr3	9843710	9843785	(188451774)	C	MIR3	SINE/MIR	(17)	191	109	2508087
2208	15.0	5.4	3.0	chr3	9844232	9844663	(188450896)	+	LTR8A	LTR/ERV1	1	443	(284)	2508088
792	29.1	14.4	2.1	chr3	9954441	9954920	(188340639)	C	L3	LINE/CR1	(308)	3791	3245	2508339
47	0.0	0.0	0.0	chr3	11475869	11475908	(186819651)	+	(AC)n	Simple_repeat	1	40	(0)	2511534
227	27.7	2.4	5.7	chr3	11495988	11496075	(186799484)	C	MIR	SINE/MIR	(79)	183	99	2511556
549	25.7	3.3	3.6	chr3	11632717	11632886	(186662673)	+	L2a	LINE/L2	3224	3411	(15)	2511769
318	26.0	8.3	1.6	chr3	12471214	12471361	(185824198)	C	MIRc	SINE/MIR	(85)	183	26	2513326
381	20.8	5.7	6.9	chr3	12471426	12471585	(185823974)	C	LTR88b	LTR/Gypsy?	(8)	829	672	2513327
532	26.9	7.0	1.2	chr3	12483442	12483603	(185811956)	C	L2c	LINE/L2	(191)	3196	3025	2513361
1868	11.8	0.4	0.0	chr3	12660696	12660941	(185634618)	+	AluSg4	SINE/Alu	2	248	(62)	2513755
308	21.9	11.0	0.9	chr3	12995200	12995305	(185300254)	+	MIR3	SINE/MIR	5	122	(86)	2514434
2345	9.8	0.0	0.0	chr3	13578773	13579068	(184716491)	+	AluSp	SINE/Alu	1	296	(17)	2515548
3364	20.3	5.5	2.7	chr3	13579069	13579250	(184716309)	C	L1MB7	LINE/L1	(602)	5582	5382	2515547
1061	19.9	2.6	1.7	chr3	13579258	13579487	(184716072)	C	Charlie1	DNA/hAT-Charlie	(2549)	232	1	2515549
623	26.4	11.5	0.4	chr3	13650226	13650472	(184645087)	C	L2c	LINE/L2	(79)	3308	3031	2515680
300	34.0	5.2	4.5	chr3	14123511	14123664	(184171895)	+	MIR3	SINE/MIR	51	205	(3)	2516334
424	30.5	1.5	0.8	chr3	14372082	14372210	(183923349)	+	MIRb	SINE/MIR	22	151	(117)	2516797
651	30.4	1.0	1.0	chr3	14372358	14372550	(183923009)	C	MIR	SINE/MIR	(60)	202	10	2516798
13	19.3	2.2	4.3	chr3	15206100	15206144	(183089415)	+	(GCCCG)n	Simple_repeat	1	46	(0)	2518367
194	24.7	8.3	4.9	chr3	15861320	15861400	(182434159)	+	MIRc	SINE/MIR	140	223	(45)	2519516
12	18.8	2.6	2.6	chr3	16149075	16149112	(182146447)	+	(CAGCC)n	Simple_repeat	1	39	(0)	2520030
2904	15.2	2.3	3.3	chr3	16665378	16665682	(181629877)	+	LTR72	LTR/ERV1	4	299	(220)	2520870
939	26.1	3.9	10.4	chr3	16945089	16945502	(181350057)	+	L2a	LINE/L2	3041	3426	(0)	2521236
240	33.3	10.9	3.2	chr3	16945499	16945718	(181349841)	+	L2c	LINE/L2	3145	3383	(4)	2521237
982	32.8	6.9	1.9	chr3	17730256	17730736	(180564823)	+	MLT1G1	LTR/ERVL-MaLR	73	579	(0)	2522279
243	26.7	0.0	0.0	chr3	17730740	17730784	(180564775)	+	L2a	LINE/L2	3342	3386	(40)	2522280
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
16	5.2	0.0	0.0	chr3	18423743	18423762	(179871797)	+	(A)n	Simple_repeat	1	20	(0)	2523264
1004	29.1	4.7	7.0	chr3	19888926	19889365	(178406194)	+	HERVL40-int	LTR/ERVL	142	570	(4960)	2525248
1979	30.2	3.8	3.5	chr3	19889417	19889749	(178405810)	+	HERVL40-int	LTR/ERVL	567	892	(4638)	2525248
33	9.0	5.0	0.0	chr3	20040837	20040896	(178254663)	+	(CCCGCCT)n	Simple_repeat	1	63	(0)	2525558
229	37.3	0.0	7.8	chr3	20056756	20056883	(178238676)	+	MIRb	SINE/MIR	23	140	(128)	2525598
2046	11.8	6.9	1.4	chr3	22734365	22734718	(175560841)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2529128
555	31.3	2.4	1.5	chr3	23002969	23003172	(175292387)	C	MIRb	SINE/MIR	(29)	239	34	2529515
180	38.2	7.6	3.4	chr3	23003179	23003354	(175292205)	+	L2a	LINE/L2	2977	3160	(215)	2529516
406	24.2	4.8	0.0	chr3	23455104	23455202	(174840357)	C	Tigger19b	DNA/TcMar-Tigger	(374)	176	73	2530172
9119	12.8	1.6	1.1	chr3	23455240	23455435	(174840124)	C	Tigger1	DNA/TcMar-Tigger	(7)	2411	2225	2530173
1485	15.9	9.3	1.1	chr3	23455436	23455711	(174839848)	+	AluJr	SINE/Alu	1	301	(11)	2530174
772	30.2	19.6	1.2	chr3	23659769	23660574	(174634985)	C	L1ME3Cz	LINE/L1	(31)	966	5	2530481
18	22.6	8.3	1.1	chr3	23806890	23806973	(174488586)	+	(CCTGC)n	Simple_repeat	1	91	(0)	2530814
181	35.3	2.5	7.8	chr3	23836815	23836943	(174458616)	C	L2c	LINE/L2	(0)	3387	3266	2530862
870	20.4	9.2	0.0	chr3	23836972	23837187	(174458372)	+	MIR	SINE/MIR	4	241	(21)	2530863
756	23.9	23.4	1.2	chr3	23924839	23925171	(174370388)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	2531016
561	15.7	1.6	6.9	chr3	23925285	23925351	(174370208)	C	Zaphod3	DNA/hAT-Tip100	(2449)	174	112	2531017
16	14.9	6.9	4.8	chr3	24401459	24401519	(173894040)	+	(TTA)n	Simple_repeat	1	62	(0)	2531819
1501	22.8	7.1	1.1	chr3	24684760	24685131	(173610428)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2532247
24	12.6	0.0	0.0	chr3	24812393	24812428	(173483131)	+	(GA)n	Simple_repeat	1	36	(0)	2532455
16	14.2	0.0	0.0	chr3	27484180	27484224	(170811335)	+	(CTGCCG)n	Simple_repeat	1	45	(0)	2536145
16	27.1	4.5	3.2	chr3	27484236	27484324	(170811235)	+	(CGTG)n	Simple_repeat	1	93	(0)	2536146
238	32.7	6.6	1.9	chr3	29170943	29171101	(169124458)	C	MLT1O	LTR/ERVL-MaLR	(315)	227	61	2538795
717	28.2	7.8	0.0	chr3	29521646	29521868	(168773691)	C	MIR	SINE/MIR	(16)	246	5	2539290
782	30.0	9.3	7.7	chr3	29522047	29522190	(168773369)	C	LTR33A	LTR/ERVL	(6)	514	354	2539291
563	18.9	0.0	0.0	chr3	30602080	30602174	(167693385)	C	MER34	LTR/ERV1	(447)	95	1	2540784
571	28.3	1.6	0.0	chr3	30602206	30602354	(167693205)	+	MIRb	SINE/MIR	9	161	(107)	2540785
328	26.9	5.4	2.1	chr3	30655663	30655806	(167639753)	+	MIRb	SINE/MIR	96	244	(24)	2540876
919	30.3	1.6	0.4	chr3	31165676	31165920	(167129639)	C	MIR	SINE/MIR	(0)	262	15	2541649
5262	12.7	2.7	0.6	chr3	31179002	31180583	(167114976)	C	L1PA16	LINE/L1	(9)	6157	4549	2541670
1590	9.1	14.4	6.0	chr3	31544686	31544937	(166750622)	+	AluSg	SINE/Alu	5	281	(29)	2542264
781	14.5	0.0	2.9	chr3	32812942	32813077	(165482482)	+	FLAM_C	SINE/Alu	7	132	(1)	2544744
13	25.0	2.7	5.3	chr3	33097152	33097224	(165198335)	+	(CCCGCGC)n	Simple_repeat	1	75	(0)	2545277
26	14.1	2.9	4.3	chr3	33114562	33114629	(165180930)	+	(GCCCCG)n	Simple_repeat	1	70	(0)	2545325
278	30.2	8.0	0.8	chr3	33114709	33114835	(165180724)	+	MIRb	SINE/MIR	132	268	(0)	2545326
671	22.4	1.2	2.4	chr3	33372845	33373009	(164922550)	+	MER5A1	DNA/hAT-Charlie	4	166	(0)	2545756
405	27.2	6.9	9.9	chr3	34010327	34010391	(164285168)	+	MLT1H1	LTR/ERVL-MaLR	1	52	(497)	2546813
187	39.8	4.2	0.0	chr3	36206585	36206697	(162088862)	C	L2c	LINE/L2	(246)	3141	3024	2549602
381	20.9	6.8	9.1	chr3	37504483	37504603	(160790956)	+	L2c	LINE/L2	3269	3386	(1)	2551679
11	22.9	3.2	6.2	chr3	39150971	39151033	(159144526)	+	(CAGAGG)n	Simple_repeat	1	65	(0)	2554039
1136	30.9	3.3	3.0	chr3	39180055	39180693	(159114866)	C	L2a	LINE/L2	(139)	3287	2639	2554101
584	19.9	1.7	16.6	chr3	41933292	41933502	(156362057)	C	MER58A	DNA/hAT-Charlie	(0)	224	46	2558189
309	28.4	3.3	0.0	chr3	42496885	42497000	(155798559)	C	L1MEi	LINE/L1	(216)	1996	1877	2559210
1532	23.4	4.3	3.4	chr3	43086864	43087274	(155208285)	+	MLT1C	LTR/ERVL-MaLR	53	467	(0)	2560117
610	29.3	4.5	2.5	chr3	43104755	43104950	(155190609)	C	MIRb	SINE/MIR	(9)	259	60	2560142
12	12.0	0.0	6.5	chr3	43858331	43858361	(154437198)	+	(CTCCT)n	Simple_repeat	1	31	(0)	2561264
13	21.9	3.5	5.0	chr3	43858362	43858383	(154437176)	+	(TCC)n	Simple_repeat	6	60	(0)	2561265
446	20.6	9.0	0.8	chr3	44884141	44884272	(153411287)	+	MER5B	DNA/hAT-Charlie	20	163	(15)	2562840
283	18.5	21.2	0.0	chr3	44885598	44885705	(153409854)	+	MIRb	SINE/MIR	110	246	(22)	2562843
360	21.5	10.6	0.0	chr3	45442050	45442142	(152853417)	+	Eulor9A	DNA	173	276	(25)	2563849
236	28.1	5.0	2.0	chr3	45644312	45644409	(152651150)	C	MamRep434	DNA/TcMar-Tigger	(324)	102	2	2564218
453	28.6	14.5	5.5	chr3	46393588	46393842	(151901717)	C	L2c	LINE/L2	(0)	3387	3106	2565326
14	23.0	1.8	5.3	chr3	46979798	46979853	(151315706)	+	(CGG)n	Simple_repeat	1	57	(0)	2566214
14	7.8	0.0	6.5	chr3	46979838	46979868	(151315691)	+	(GCCGG)n	Simple_repeat	1	31	(0)	2566215
2322	9.5	0.0	0.3	chr3	48024030	48024333	(150271226)	+	AluSc	SINE/Alu	1	303	(6)	2568455
384	24.0	6.3	2.8	chr3	48024378	48024484	(150271075)	+	MLT1J2	LTR/ERVL-MaLR	31	141	(307)	2568456
465	21.1	13.6	3.8	chr3	48024581	48024738	(150270821)	+	MLT1J2	LTR/ERVL-MaLR	273	448	(0)	2568456
13	21.1	2.6	0.0	chr3	48089099	48089136	(150206423)	+	(TGCGGCC)n	Simple_repeat	1	39	(0)	2568629
749	17.6	3.1	8.8	chr3	48089409	48089613	(150205946)	+	MER33	DNA/hAT-Charlie	27	219	(105)	2568630
2011	9.5	4.0	0.0	chr3	48236978	48237241	(150058318)	C	AluSx	SINE/Alu	(37)	275	1	2569002
1828	24.6	7.1	0.6	chr3	48237242	48237543	(150058016)	+	LTR75	LTR/ERVL	215	537	(25)	2569000
2157	11.3	0.3	0.3	chr3	48242120	48242411	(150053148)	C	AluSx	SINE/Alu	(20)	292	1	2569017
1036	11.5	0.0	0.0	chr3	48242465	48242603	(150052956)	C	FLAM_C	SINE/Alu	(4)	139	1	2569018
467	30.9	3.3	1.0	chr3	48416804	48417012	(149878547)	+	Tigger12c	DNA/TcMar-Tigger	226	439	(295)	2569289
203	35.3	11.9	0.0	chr3	48417211	48417329	(149878230)	+	MER5A	DNA/hAT-Charlie	55	189	(0)	2569290
892	15.6	0.6	1.3	chr3	48513970	48514125	(149781434)	C	MLT1C	LTR/ERVL-MaLR	(292)	175	21	2569490
13	8.5	0.0	3.7	chr3	48685810	48685836	(149609723)	+	(GGCAG)n	Simple_repeat	1	27	(0)	2569696
17	26.6	5.3	3.0	chr3	48685860	48685954	(149609605)	+	(CGCCG)n	Simple_repeat	1	100	(0)	2569697
14	19.2	2.8	0.0	chr3	48847788	48847823	(149447736)	+	(CCG)n	Simple_repeat	1	37	(0)	2570099
221	33.1	3.2	5.7	chr3	49094659	49094850	(149200709)	+	L2b	LINE/L2	3015	3201	(174)	2570662
2065	10.5	0.0	2.3	chr3	49429415	49429719	(148865840)	C	AluSx1	SINE/Alu	(10)	302	5	2571324
17	6.3	2.7	5.3	chr3	49724202	49724238	(148571321)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	2571830
677	22.8	0.0	0.0	chr3	49774748	49774874	(148520685)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	528	2571952
14	19.5	0.0	6.4	chr3	49803206	49803252	(148492307)	+	G-rich	Low_complexity	1	47	(0)	2572003
503	21.1	0.7	17.4	chr3	49930311	49930378	(148365181)	C	MER5B	DNA/hAT-Charlie	(0)	178	123	2572230
1935	12.2	4.3	0.0	chr3	49930379	49930666	(148364893)	+	AluSz	SINE/Alu	1	301	(11)	2572231
1443	12.8	2.9	6.4	chr3	51500531	51500779	(146794780)	C	AluSx3	SINE/Alu	(2)	309	70	2574463
8156	6.7	21.6	1.3	chr3	51990374	51991626	(146303933)	+	LTR12C	LTR/ERV1	2	1579	(0)	2575270
284	22.2	14.7	1.0	chr3	52154092	52154191	(146141368)	+	L2b	LINE/L2	3242	3357	(18)	2575489
764	15.7	7.8	7.8	chr3	52288176	52288222	(146007337)	+	MER53	DNA/hAT	1	34	(159)	2575714
2382	9.0	0.0	0.0	chr3	52822062	52822360	(145473199)	+	AluY	SINE/Alu	1	299	(12)	2576530
361	31.2	7.4	2.7	chr3	52822361	52822469	(145473090)	C	MER113A	DNA/hAT-Charlie	(165)	149	40	2576529
523	28.9	2.4	2.3	chr3	52822520	52822702	(145472857)	C	MIR	SINE/MIR	(18)	212	24	2576531
293	33.3	1.7	3.4	chr3	54251806	54251923	(144043636)	+	UCON55	DNA/TcMar-Tigger	76	191	(1)	2578819
211	17.8	6.2	2.2	chr3	55486574	55486619	(142808940)	+	L2a	LINE/L2	3375	3422	(4)	2580517
408	23.6	0.0	4.5	chr3	56684246	56684356	(141611203)	C	MIR	SINE/MIR	(4)	258	153	2582527
586	19.9	5.6	0.7	chr3	57015069	57015205	(141280354)	+	MER58A	DNA/hAT-Charlie	1	144	(80)	2583175
305	20.8	19.1	0.0	chr3	57015343	57015448	(141280111)	+	Arthur1B	DNA/hAT-Tip100	19	149	(1076)	2583176
2054	13.6	1.4	0.0	chr3	57943251	57943537	(140352022)	+	AluJb	SINE/Alu	1	291	(21)	2584979
401	29.0	5.9	1.2	chr3	58029813	58029994	(140265565)	+	MIR	SINE/MIR	26	222	(46)	2585231
461	22.9	13.7	4.5	chr3	58030247	58030447	(140265112)	C	MLT1L	LTR/ERVL-MaLR	(5)	605	361	2585232
189	29.0	10.1	2.7	chr3	58063432	58063541	(140232018)	C	L2	LINE/L2	(1051)	2368	2250	2585308
19	31.7	1.0	3.8	chr3	58237792	58237895	(140057664)	+	G-rich	Low_complexity	1	105	(0)	2585629
18	13.3	0.0	0.0	chr3	58306041	58306073	(139989486)	+	(TGAA)n	Simple_repeat	1	33	(0)	2585763
250	17.4	0.0	0.0	chr3	58334915	58334928	(139960631)	C	AluSq	SINE/Alu	(182)	131	118	2585828
63	1.8	0.0	0.0	chr3	58334929	58334986	(139960573)	+	(GT)n	Simple_repeat	1	58	(0)	2585829
250	17.4	0.0	0.0	chr3	58334987	58335018	(139960541)	C	AluSq	SINE/Alu	(196)	117	86	2585828
48	0.0	0.0	0.0	chr3	58335019	58335059	(139960500)	+	(GT)n	Simple_repeat	1	41	(0)	2585830
696	18.3	0.9	0.0	chr3	58335060	58335174	(139960385)	C	AluJo	SINE/Alu	(196)	116	1	2585831
214	28.4	6.4	3.3	chr3	59559972	59560062	(138735497)	C	MIRb	SINE/MIR	(142)	126	33	2587688
648	32.1	3.3	1.1	chr3	61251945	61252213	(137043346)	+	L2a	LINE/L2	3150	3398	(28)	2590234
1456	20.7	6.8	8.5	chr3	61615666	61615950	(136679609)	C	L1MC4	LINE/L1	(975)	7067	6802	2590932
2306	12.0	0.3	0.3	chr3	61615951	61616250	(136679309)	C	AluSx	SINE/Alu	(11)	301	2	2590933
191	35.8	2.4	1.2	chr3	61628111	61628192	(136667367)	C	L2b	LINE/L2	(2)	3373	3291	2590950
1709	19.5	5.8	0.9	chr3	61649322	61649667	(136645892)	C	MLT1A1	LTR/ERVL-MaLR	(44)	364	1	2590992
196	33.8	7.6	1.1	chr3	61649770	61649882	(136645677)	C	MIR	SINE/MIR	(87)	143	25	2590987
246	31.8	8.9	9.9	chr3	61651138	61651308	(136644251)	+	UCON8	DNA	44	212	(903)	2590993
456	22.9	11.3	0.0	chr3	61802980	61803097	(136492462)	+	MER58A	DNA/hAT-Charlie	4	136	(88)	2591256
408	28.6	0.8	0.0	chr3	61821797	61821915	(136473644)	C	MIR	SINE/MIR	(48)	214	95	2591292
186	30.6	2.7	2.7	chr3	61822016	61822089	(136473470)	C	MIR	SINE/MIR	(129)	133	60	2591293
274	32.1	19.2	5.8	chr3	61846402	61846606	(136448953)	+	MIRb	SINE/MIR	14	252	(16)	2591334
1952	15.9	0.3	0.0	chr3	61846638	61846920	(136448639)	+	AluJb	SINE/Alu	5	288	(24)	2591335
366	22.4	1.5	0.0	chr3	61872227	61872293	(136423266)	+	AluJr4	SINE/Alu	137	204	(108)	2591378
438	20.7	0.0	0.0	chr3	61872301	61872382	(136423177)	+	FAM	SINE/Alu	97	178	(7)	2591379
509	31.2	6.5	2.3	chr3	61872383	61872602	(136422957)	+	MIRb	SINE/MIR	28	257	(11)	2591380
629	22.8	13.0	2.2	chr3	61894916	61895099	(136400460)	C	MER20	DNA/hAT-Charlie	(11)	208	2	2591419
539	29.2	1.7	2.3	chr3	61975206	61975380	(136320179)	+	MIRb	SINE/MIR	77	250	(18)	2591546
247	18.2	0.0	0.0	chr3	62065652	62065704	(136229855)	C	L2c	LINE/L2	(0)	3387	3323	2591697
252	24.8	15.3	7.1	chr3	62476033	62476145	(135819414)	+	L2b	LINE/L2	3252	3375	(0)	2592332
911	30.7	11.7	3.4	chr3	63959861	63960678	(134334881)	C	L2a	LINE/L2	(0)	3426	2529	2594962
418	30.9	9.1	0.4	chr3	64131971	64132241	(134163318)	+	L2b	LINE/L2	2955	3252	(174)	2595193
198	23.7	0.0	0.0	chr3	64187170	64187207	(134108352)	+	MIR3	SINE/MIR	36	73	(135)	2595282
202	21.1	1.3	13.6	chr3	65635994	65636081	(132659478)	+	Penelope1_Vert	LINE/Penelope	985	1061	(26)	2597737
14	0.0	0.0	0.0	chr3	69084996	69085013	(129210546)	+	(GCC)n	Simple_repeat	1	18	(0)	2603423
572	27.9	7.0	2.3	chr3	69143825	69144000	(129151559)	C	MER117	DNA/hAT-Charlie	(0)	197	13	2603550
901	27.9	7.9	1.2	chr3	69144624	69145026	(129150533)	C	LTR33	LTR/ERVL	(83)	432	1	2603551
344	30.4	3.9	8.1	chr3	69145169	69145369	(129150190)	C	MLT1J	LTR/ERVL-MaLR	(228)	284	92	2603552
38	2.8	0.0	0.0	chr3	69250282	69250318	(129045241)	+	(TG)n	Simple_repeat	1	37	(0)	2603777
194	20.4	6.4	0.0	chr3	69442847	69442890	(128852669)	+	MIR3	SINE/MIR	112	158	(50)	2604172
471	19.5	5.0	0.0	chr3	69442891	69443003	(128852556)	+	MER21C	LTR/ERVL	1	119	(819)	2604173
199	31.8	15.6	0.7	chr3	72995449	72995600	(125299959)	+	MIR3	SINE/MIR	26	204	(4)	2610393
430	33.2	12.1	1.0	chr3	72995643	72995840	(125299719)	C	MIRb	SINE/MIR	(20)	248	26	2610394
279	32.2	4.4	2.2	chr3	73298949	73299037	(124996522)	C	L2b	LINE/L2	(1)	3374	3284	2610986
250	34.6	8.7	2.2	chr3	78995402	78995584	(119299975)	+	L2	LINE/L2	2654	2849	(570)	2618905
23	22.5	4.5	3.3	chr3	88058915	88059002	(110236557)	+	(CCG)n	Simple_repeat	1	92	(0)	2630311
807	18.4	1.4	0.7	chr3	94292053	94292194	(104003365)	+	MER65C	LTR/ERV1	1	143	(318)	2634120
1634	19.4	1.3	1.3	chr3	94292345	94292657	(104002902)	+	MER65C	LTR/ERV1	147	459	(2)	2634120
540	31.6	7.7	0.9	chr3	98500135	98500364	(99795195)	C	MIR	SINE/MIR	(4)	258	12	2639004
301	37.1	8.9	0.0	chr3	99783026	99783219	(98512340)	+	Plat_L3	LINE/CR1	3258	3470	(116)	2640700
438	23.4	10.7	4.3	chr3	99892524	99892707	(98402852)	C	MLT1L	LTR/ERVL-MaLR	(160)	435	251	2640852
391	32.0	16.3	3.9	chr3	99943786	99943993	(98351566)	+	MIRb	SINE/MIR	9	247	(21)	2640934
522	25.3	0.0	8.8	chr3	100264830	100265011	(98030548)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	2641437
241	18.4	0.0	2.0	chr3	100265150	100265199	(98030360)	+	L2b	LINE/L2	3324	3372	(3)	2641438
5717	18.9	7.0	2.3	chr3	101311206	101313127	(96982432)	+	L1MB8	LINE/L1	4128	6177	(1)	2642852
2493	5.8	0.3	0.0	chr3	101686977	101687270	(96608289)	C	AluSp	SINE/Alu	(18)	295	1	2643440
355	39.0	2.2	6.7	chr3	102163591	102163873	(96131686)	+	MamTip2	DNA/hAT-Tip100	33	302	(3)	2644177
21140	14.8	3.1	0.6	chr3	102201795	102207088	(96088471)	C	L1M1	LINE/L1	(2040)	5525	99	2644234
15	8.9	4.2	0.0	chr3	106381485	106381508	(91914051)	+	(TG)n	Simple_repeat	1	25	(0)	2649439
1134	21.0	1.2	2.7	chr3	120048399	120048657	(78246902)	+	MIR	SINE/MIR	3	257	(5)	2668537
2283	16.5	4.0	1.1	chr3	120049915	120050356	(78245203)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	3	2668539
62	20.0	3.9	5.4	chr3	122825033	122825087	(75470472)	+	(CTTT)n	Simple_repeat	2	58	(0)	2672672
736	23.6	3.9	2.9	chr3	123642641	123642845	(74652714)	+	MIR	SINE/MIR	44	250	(12)	2674077
2824	19.7	11.8	3.0	chr3	123936381	123936499	(74359060)	C	L1ME1	LINE/L1	(0)	6179	6049	2674529
2265	8.7	1.2	2.6	chr3	123936500	123936843	(74358716)	+	L1PA14	LINE/L1	5806	6144	(17)	2674530
2028	12.0	0.3	1.3	chr3	127738019	127738319	(70557240)	+	AluJb	SINE/Alu	1	298	(14)	2680581
507	27.6	8.3	10.7	chr3	128684963	128685420	(69610139)	C	MLT1J	LTR/ERVL-MaLR	(37)	475	30	2682223
18	12.2	4.2	4.0	chr3	129249550	129249597	(69045962)	+	(AGAGCGC)n	Simple_repeat	1	50	(0)	2683412
14	19.7	4.2	2.0	chr3	132417559	132417606	(65877953)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	2688441
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
5679	6.3	0.0	0.0	chr3	135439149	135439860	(62855699)	C	L1P1	LINE/L1	(5443)	712	1	2692861
263	29.9	0.6	8.8	chr3	138174116	138174230	(60121329)	+	L2a	LINE/L2	3264	3426	(0)	2697099
187	21.4	6.7	1.8	chr3	138774679	138774735	(59520824)	+	AmnSINE1	SINE/5S-Deu-L2	117	176	(399)	2698110
203	32.2	4.2	5.7	chr3	139293074	139293195	(59002364)	+	OldhAT1	DNA/hAT-Ac	1299	1418	(1430)	2699095
837	25.3	3.3	7.3	chr3	139534834	139535119	(58760440)	C	MER102b	DNA/hAT-Charlie	(56)	285	12	2699487
481	28.7	10.6	4.7	chr3	139535232	139535673	(58759886)	+	L2b	LINE/L2	2884	3333	(42)	2699488
1307	24.4	7.8	2.0	chr3	141370088	141370438	(56925121)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	64	2702204
12	31.9	3.2	0.0	chr3	142596364	142596425	(55699134)	+	G-rich	Low_complexity	1	64	(0)	2704384
283	29.2	12.2	5.9	chr3	142648006	142648158	(55647401)	+	L2b	LINE/L2	3207	3370	(5)	2704484
407	33.1	9.2	7.0	chr3	143643814	143644229	(54651330)	+	MLT1K	LTR/ERVL-MaLR	146	571	(24)	2705951
11	21.1	2.5	2.4	chr3	143644517	143644556	(54651003)	+	A-rich	Low_complexity	1	41	(0)	2705952
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
526	26.4	9.2	0.6	chr3	149752742	149752920	(48542639)	C	MIR	SINE/MIR	(3)	259	64	2714161
1563	27.2	5.7	1.3	chr3	155449729	155450194	(42845365)	+	LTR16C	LTR/ERVL	1	488	(1)	2722514
1802	13.9	10.7	1.3	chr3	156841868	156842172	(41453387)	+	MER1B	DNA/hAT-Charlie	3	339	(0)	2724629
20841	15.6	2.8	1.2	chr3	158258236	158261159	(40034400)	C	L1MA3	LINE/L1	(4601)	2964	12	2726558
12	13.8	4.4	6.4	chr3	159765903	159765947	(38529612)	+	G-rich	Low_complexity	1	47	(0)	2728703
1973	24.5	8.1	4.1	chr3	159829657	159830380	(38465179)	+	Charlie15b	DNA/hAT-Charlie	279	1033	(28)	2728813
3281	21.7	4.9	2.1	chr3	160618910	160619699	(37675860)	C	L1MC3	LINE/L1	(12)	7773	6961	2730068
382	25.0	13.0	0.0	chr3	160684011	160684130	(37611429)	+	MIRb	SINE/MIR	4	141	(127)	2730183
310	20.3	0.0	0.0	chr3	160684132	160684195	(37611364)	+	MLT1J2	LTR/ERVL-MaLR	352	415	(33)	2730184
44	0.0	0.0	0.0	chr3	160756753	160756790	(37538769)	+	(GT)n	Simple_repeat	1	38	(0)	2730313
28	12.7	0.0	0.0	chr3	161576729	161576771	(36718788)	+	(TC)n	Simple_repeat	1	43	(0)	2731552
37	0.0	0.0	0.0	chr3	168096250	168096281	(30199278)	+	(GT)n	Simple_repeat	1	32	(0)	2739595
20	4.3	0.0	0.0	chr3	169149074	169149097	(29146462)	+	(T)n	Simple_repeat	1	24	(0)	2740988
696	27.5	8.7	0.8	chr3	169494968	169495209	(28800350)	C	Plat_L3	LINE/CR1	(212)	3374	3112	2741389
394	33.0	15.4	4.4	chr3	170227279	170228131	(28067428)	C	L2c	LINE/L2	(9)	3366	2406	2742603
193	26.2	0.0	15.2	chr3	170228143	170228241	(28067318)	C	L2a	LINE/L2	(12)	3414	3331	2742604
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
207	31.8	5.5	0.0	chr3	171240402	171240486	(27055073)	+	MIRb	SINE/MIR	141	230	(38)	2744233
737	31.1	12.2	3.3	chr3	171240525	171240976	(27054583)	+	L2a	LINE/L2	2929	3426	(0)	2744234
1662	14.3	6.9	3.7	chr3	171443552	171443845	(26851714)	+	AluJo	SINE/Alu	1	304	(8)	2744528
714	27.3	14.5	0.9	chr3	171790571	171790903	(26504656)	+	MLT1J	LTR/ERVL-MaLR	127	512	(0)	2745087
455	29.8	6.5	4.1	chr3	171792838	171793106	(26502453)	+	LTR88a	LTR/Gypsy?	528	803	(13)	2745088
16	14.2	0.0	0.0	chr3	171810484	171810514	(26485045)	+	(GGGA)n	Simple_repeat	1	31	(0)	2745122
219	21.4	0.0	0.0	chr3	173503277	173503318	(24792241)	C	L2b	LINE/L2	(12)	3363	3322	2747645
188	29.7	1.5	3.0	chr3	179068099	179068164	(19227395)	C	L3b	LINE/CR1	(2)	5230	5166	2755558
278	31.6	7.6	0.8	chr3	182365816	182365949	(15929610)	C	MER121	DNA/hAT?	(240)	161	18	2760931
1452	15.4	14.6	0.0	chr3	185335561	185335852	(12959707)	C	MER2	DNA/TcMar-Tigger	(3)	342	1	2766192
19	25.1	2.2	5.5	chr3	186567280	186567368	(11728191)	+	(CGC)n	Simple_repeat	1	91	(0)	2768577
503	28.6	10.0	2.1	chr3	186567636	186567874	(11727685)	C	MIRb	SINE/MIR	(2)	266	7	2768578
240	24.6	1.6	0.0	chr3	186751634	186751694	(11543865)	C	L2c	LINE/L2	(258)	3129	3068	2768891
193	34.5	7.3	2.1	chr3	186751696	186751837	(11543722)	+	L3	LINE/CR1	3948	4097	(2)	2768901
255	14.4	6.6	0.6	chr3	187738118	187738188	(10557371)	C	MIR3	SINE/MIR	(132)	98	24	2770629
36	23.5	0.0	0.0	chr3	187745323	187745401	(10550158)	+	(AGC)n	Simple_repeat	1	79	(0)	2770635
2041	26.6	6.0	0.2	chr3	190972706	190973221	(7322338)	+	MLT1F1	LTR/ERVL-MaLR	1	548	(21)	2775906
706	23.6	6.0	18.0	chr3	191721917	191722371	(6573188)	C	MER68	LTR/ERVL	(166)	397	1	2776931
514	25.9	8.8	0.0	chr3	191722375	191722602	(6572957)	C	L1MD	LINE/L1	(2169)	3977	3728	2776932
13	28.1	3.1	3.0	chr3	193960758	193960821	(4334738)	+	GA-rich	Low_complexity	1	66	(0)	2780273
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
14	4.5	4.3	0.0	chr3	194184466	194184488	(4111071)	+	(GGA)n	Simple_repeat	1	24	(0)	2780696
572	30.7	1.0	6.4	chr3	194350403	194350621	(3944938)	+	MIRb	SINE/MIR	55	261	(7)	2780982
509	22.1	0.0	2.6	chr3	194366247	194366362	(3929197)	+	MIR	SINE/MIR	150	262	(0)	2781004
305	26.9	3.1	1.1	chr3	194366415	194366508	(3929051)	C	MER5A1	DNA/hAT-Charlie	(57)	109	14	2781005
16	23.6	4.4	2.8	chr3	194486657	194486724	(3808835)	+	(CGCCGC)n	Simple_repeat	1	71	(0)	2781195
14	18.3	2.7	0.0	chr3	194486839	194486875	(3808684)	+	G-rich	Low_complexity	1	38	(0)	2781196
216	25.4	14.8	3.1	chr3	194561783	194561941	(3733618)	+	MIR3	SINE/MIR	17	184	(78)	2781388
844	14.3	0.0	0.0	chr3	194562023	194562155	(3733404)	+	FLAM_C	SINE/Alu	1	133	(10)	2781389
382	31.0	9.4	4.2	chr3	194817253	194817444	(3478115)	C	L3	LINE/CR1	(2306)	1793	1591	2781895
13	12.5	0.0	0.0	chr3	196739832	196739857	(1555702)	+	(GCCCC)n	Simple_repeat	1	26	(0)	2785665
15	25.2	0.0	3.6	chr3	197298664	197298718	(996841)	+	G-rich	Low_complexity	1	55	(0)	2786666
26	6.3	0.0	0.0	chr3	197298935	197298968	(996591)	+	(TTCA)n	Simple_repeat	1	34	(0)	2786667
273	24.3	15.0	1.5	chr3	197299251	197299363	(996196)	C	MIR3	SINE/MIR	(140)	128	4	2786668
415	25.0	3.5	2.6	chr3	197299526	197299640	(995919)	C	MIR3	SINE/MIR	(74)	134	19	2786669
1772	10.3	5.3	2.2	chr3	197751359	197751631	(543928)	+	AluSz6	SINE/Alu	1	282	(30)	2787462
17	16.2	3.9	3.7	chr4	1856653	1856704	(188357851)	+	(CTGCGCT)n	Simple_repeat	1	54	(0)	2790697
12	14.5	0.0	10.6	chr4	2812383	2812429	(187402126)	+	(TGGCCCC)n	Simple_repeat	1	47	(0)	2792265
621	28.1	3.6	8.7	chr4	6582942	6583296	(183631259)	C	MLT1J2	LTR/ERVL-MaLR	(50)	398	63	2798662
552	25.7	0.6	6.4	chr4	6583297	6583483	(183631072)	C	MLT1J	LTR/ERVL-MaLR	(334)	178	3	2798663
7969	6.3	23.6	0.1	chr4	6672541	6673747	(183540808)	+	LTR12C	LTR/ERV1	2	1579	(0)	2798852
622	17.4	5.7	1.5	chr4	13640025	13640146	(176574409)	+	MER63B	DNA/hAT-Blackjack	297	425	(11)	2809620
3234	15.3	2.9	0.2	chr4	13640147	13640651	(176573904)	C	LTR72	LTR/ERV1	(0)	519	1	2809621
241	32.9	8.5	0.7	chr4	14968041	14968181	(175246374)	C	MLT1K	LTR/ERVL-MaLR	(301)	294	142	2811899
14	18.4	2.7	0.0	chr4	17811198	17811234	(172403321)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	2816977
445	29.6	1.2	1.2	chr4	19823864	19824024	(170390531)	+	Eulor6B	DNA?	84	244	(94)	2820091
351	33.6	13.3	0.0	chr4	22500246	22500467	(167714088)	+	MIR	SINE/MIR	19	262	(0)	2824057
29	19.6	0.0	0.0	chr4	24472884	24472921	(165741634)	+	(GC)n	Simple_repeat	1	38	(0)	2827183
31	0.0	3.3	0.0	chr4	24472922	24472951	(165741604)	+	(GT)n	Simple_repeat	1	31	(0)	2827184
29	19.6	0.0	0.0	chr4	24472952	24472971	(165741584)	+	(GC)n	Simple_repeat	1	20	(0)	2827185
202	32.4	3.9	0.0	chr4	26320446	26320519	(163894036)	+	L2b	LINE/L2	3298	3374	(1)	2830849
650	29.1	5.8	2.6	chr4	26931996	26932228	(163282327)	C	MIR	SINE/MIR	(10)	252	12	2831839
3185	19.6	7.1	3.5	chr4	31613897	31614848	(158599707)	C	LTR27E	LTR/ERV1	(296)	1459	1	2838350
247	30.1	6.4	0.0	chr4	36178762	36178834	(154035721)	C	MIR3	SINE/MIR	(96)	112	35	2844381
448	32.6	6.1	9.0	chr4	38160986	38161342	(152053213)	+	L2c	LINE/L2	3041	3386	(1)	2847298
344	20.0	7.9	0.0	chr4	40201415	40201484	(150013071)	+	MER63D	DNA/hAT-Blackjack	1	76	(985)	2851479
893	23.0	2.2	5.7	chr4	40201484	40201713	(150012842)	+	MER63B	DNA/hAT-Blackjack	215	436	(0)	2851480
20	10.1	0.0	0.0	chr4	48341707	48341738	(141872817)	+	(GGC)n	Simple_repeat	1	32	(0)	2863702
401	29.6	14.8	0.0	chr4	48370339	48370551	(141844004)	+	MIRb	SINE/MIR	5	254	(14)	2863753
229	29.6	3.6	0.0	chr4	57191730	57191810	(133022745)	C	LTR104_Mam	LTR/Gypsy	(769)	740	657	2874125
220	26.0	5.2	5.2	chr4	70779254	70779330	(119435225)	+	MIR3	SINE/MIR	75	151	(57)	2891182
3218	11.6	2.0	2.2	chr4	74201989	74202481	(116012074)	C	LTR22B	LTR/ERVK	(0)	492	1	2895850
6739	10.1	1.9	2.0	chr4	78125568	78126535	(112088020)	C	L1PA7	LINE/L1	(5213)	971	5	2901715
300	30.5	12.4	1.4	chr4	81650742	81650884	(108563671)	C	MER5A	DNA/hAT-Charlie	(23)	166	6	2906452
315	24.8	16.9	0.9	chr4	81650983	81651096	(108563459)	+	L2a	LINE/L2	3291	3426	(0)	2906453
35	29.7	1.1	5.5	chr4	82373481	82373661	(107840894)	+	(CGC)n	Simple_repeat	1	183	(0)	2907493
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
300	21.4	14.3	0.0	chr4	83034764	83034847	(107179708)	+	MER5C	DNA/hAT-Charlie	216	313	(0)	2908719
2668	5.7	0.3	0.0	chr4	83256565	83256861	(106957694)	C	AluY	SINE/Alu	(13)	298	1	2909163
928	27.1	7.4	4.8	chr4	83256997	83257158	(106957397)	C	L2a	LINE/L2	(4)	3422	3258	2909164
2102	16.1	1.7	3.7	chr4	83257159	83257258	(106957297)	+	Tigger3a	DNA/TcMar-Tigger	1	103	(245)	2909165
19	19.5	3.2	3.1	chr4	83334720	83334781	(106879774)	+	(CAGCAG)n	Simple_repeat	1	64	(0)	2909319
17	20.9	2.9	5.7	chr4	83334900	83334967	(106879588)	+	(CCTC)n	Simple_repeat	1	70	(0)	2909320
3733	18.3	7.7	1.4	chr4	83356849	83357684	(106856871)	C	L1ME2z	LINE/L1	(231)	6213	5321	2909359
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
1852	9.0	10.2	0.8	chr4	86944374	86944640	(103269915)	C	AluY	SINE/Alu	(16)	295	1	2914667
404	29.2	12.5	4.3	chr4	86944641	86944659	(103269896)	C	MIRb	SINE/MIR	(167)	101	83	2914666
353	29.5	14.4	3.9	chr4	86944660	86944670	(103269885)	C	MIR	SINE/MIR	(168)	94	61	2914666
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
240	21.5	5.3	9.3	chr4	87632441	87632558	(102581997)	C	L1ME3B	LINE/L1	(189)	6053	5941	2915849
292	23.7	2.6	0.0	chr4	87632561	87632636	(102581919)	C	MER3	DNA/hAT-Charlie	(131)	78	1	2915850
187	28.0	2.0	2.0	chr4	87632758	87632808	(102581747)	C	L2c	LINE/L2	(81)	3306	3256	2915851
661	28.4	9.9	0.8	chr4	89356070	89356435	(100858120)	C	L1M5	LINE/L1	(1112)	5034	4632	2918537
1493	24.8	6.0	6.2	chr4	91064258	91064808	(99149747)	C	MER68B	LTR/ERVL	(2)	562	13	2920753
463	32.0	21.9	0.8	chr4	94261926	94262549	(95952006)	+	L2	LINE/L2	2070	2862	(557)	2924751
665	27.1	7.3	1.6	chr4	102780625	102780844	(87433711)	+	ERVL-E-int	LTR/ERVL	4873	5167	(590)	2936136
249	32.3	0.0	0.0	chr4	102780859	102780923	(87433632)	+	LTR16D	LTR/ERVL	182	246	(405)	2936139
469	29.2	0.0	0.8	chr4	102780929	102781059	(87433496)	+	LTR16D	LTR/ERVL	521	650	(1)	2936139
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
95	2.3	0.0	0.0	chr4	105898291	105898380	(84316175)	+	(TC)n	Simple_repeat	1	90	(0)	2940143
368	27.5	8.5	5.8	chr4	105923622	105923826	(84290729)	C	MLT1J	LTR/ERVL-MaLR	(201)	311	101	2940173
264	27.6	17.3	0.9	chr4	108764946	108765051	(81449504)	+	MIRc	SINE/MIR	22	148	(120)	2944026
1888	17.6	0.0	0.0	chr4	108765074	108765352	(81449203)	+	AluJb	SINE/Alu	18	296	(16)	2944027
430	29.1	4.6	0.4	chr4	110412311	110412541	(79802014)	C	L1MEh	LINE/L1	(1235)	1000	760	2946569
230	25.0	3.5	0.0	chr4	110412643	110412698	(79801857)	+	MIR	SINE/MIR	200	257	(5)	2946570
287	32.6	4.9	3.3	chr4	110867533	110867713	(79346842)	C	LTR88a	LTR/Gypsy?	(26)	790	607	2947185
833	25.0	2.1	5.7	chr4	111993049	111993345	(78221210)	+	UCON84	Unknown	148	433	(294)	2948519
7022	6.3	0.9	0.7	chr4	113184717	113185966	(77028589)	C	L1PA7	LINE/L1	(8)	6146	4896	2950492
3039	16.7	4.5	0.5	chr4	119730565	119731135	(70483420)	C	LTR49	LTR/ERV1	(0)	595	1	2958903
190	27.1	9.1	4.1	chr4	120724190	120724262	(69490293)	+	OldhAT1	DNA/hAT-Ac	2169	2245	(603)	2960152
248	35.1	10.0	1.7	chr4	121597472	121597531	(68617024)	C	LTR67B	LTR/ERVL	(7)	613	424	2961275
730	27.8	11.9	4.9	chr4	122842485	122842950	(67371605)	+	L4_A_Mam	LINE/RTE-X	4488	4990	(0)	2963111
655	33.0	10.1	2.5	chr4	122843015	122843588	(67370967)	C	L2c	LINE/L2	(45)	3342	2702	2963113
61	0.0	1.7	1.6	chr4	128553015	128553074	(61661481)	+	(CT)n	Simple_repeat	1	61	(0)	2970885
14	11.6	0.0	3.3	chr4	137510988	137511017	(52703538)	+	(TTTTG)n	Simple_repeat	1	30	(0)	2981756
13	14.6	0.0	3.1	chr4	138815941	138815972	(51398583)	+	(TGATTA)n	Simple_repeat	1	32	(0)	2983394
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
461	14.3	18.2	1.1	chr4	139243727	139243817	(50970738)	C	AluJr	SINE/Alu	(13)	299	190	2984260
565	5.8	0.0	0.0	chr4	139243831	139243899	(50970656)	C	MER51-int	LTR/ERV1	(6652)	1164	1096	2984261
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
20	13.7	0.0	0.0	chr4	139808926	139808957	(50405598)	+	(GT)n	Simple_repeat	1	32	(0)	2985284
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
686	24.4	10.9	8.8	chr4	140359606	140359866	(49854689)	C	MLT1H1-int	LTR/ERVL-MaLR	(7)	1402	1136	2986132
297	29.5	12.9	1.6	chr4	140359940	140360103	(49854452)	+	MIR3	SINE/MIR	37	205	(3)	2986133
228	27.1	0.0	4.8	chr4	140450531	140450592	(49763963)	C	MIR	SINE/MIR	(3)	259	201	2986240
373	33.7	7.3	4.6	chr4	140450721	140450894	(49763661)	C	MIR3	SINE/MIR	(14)	194	16	2986241
516	27.1	11.2	0.0	chr4	143381444	143381642	(46832913)	+	MIR	SINE/MIR	12	235	(27)	2990250
257	26.8	4.1	0.0	chr4	148054339	148054409	(42160146)	+	MIRb	SINE/MIR	136	209	(59)	2996647
530	27.1	5.9	0.6	chr4	148261897	148262056	(41952499)	C	Tigger10	DNA/TcMar-Tigger	(187)	1657	1489	2996900
1390	19.9	14.1	1.5	chr4	150007607	150008013	(40206542)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2999134
15984	17.9	6.5	4.8	chr4	150722629	150724765	(39489790)	+	L1MA5	LINE/L1	9	2277	(5283)	3000163
184	21.6	2.6	0.0	chr4	151355717	151355753	(38858802)	+	MIR	SINE/MIR	217	254	(8)	3001347
888	22.9	7.6	8.2	chr4	153341723	153341991	(36872564)	+	MER57D	LTR/ERV1	8	290	(121)	3004467
1828	18.7	1.0	1.0	chr4	153341992	153342301	(36872254)	+	AluJo	SINE/Alu	1	310	(2)	3004468
14	11.6	3.5	0.0	chr4	155675790	155675818	(34538737)	+	(CTTCT)n	Simple_repeat	1	30	(0)	3007768
188	32.2	14.4	4.0	chr4	155675911	155676059	(34538496)	+	MamTip2	DNA/hAT-Tip100	51	217	(88)	3007769
2233	20.0	1.4	0.2	chr4	155679299	155679725	(34534830)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3007778
2686	26.9	7.1	4.5	chr4	155679726	155680498	(34534057)	C	L1MCc	LINE/L1	(1144)	5797	4977	3007777
12	24.1	0.0	0.0	chr4	156947537	156947570	(33266985)	+	(TTTG)n	Simple_repeat	1	34	(0)	3009465
367	25.0	0.8	15.7	chr4	156951077	156951223	(33263332)	C	L2a	LINE/L2	(1)	3425	3301	3009471
13	8.7	4.0	0.0	chr4	156959255	156959279	(33255276)	+	(AAAC)n	Simple_repeat	1	26	(0)	3009477
1858	12.1	5.1	6.0	chr4	158998889	158999203	(31215352)	+	AluJb	SINE/Alu	1	312	(0)	3012200
220	27.6	0.0	1.7	chr4	159078259	159078317	(31136238)	+	L2a	LINE/L2	3369	3426	(0)	3012356
187	21.6	1.9	3.8	chr4	169007803	169007855	(21206700)	C	L2b	LINE/L2	(4)	3371	3320	3025632
3473	17.3	7.2	10.1	chr4	169625842	169626695	(20587860)	C	MER21A	LTR/ERVL	(39)	892	65	3026589
1045	25.1	5.1	0.0	chr4	173248660	173248882	(16965673)	C	Charlie10a	DNA/hAT-Charlie	(0)	280	46	3031349
581	25.7	13.3	10.5	chr4	175996892	175997291	(14217264)	+	MLT1G1	LTR/ERVL-MaLR	167	579	(0)	3034927
227	31.7	3.5	0.0	chr4	175997513	175997594	(14216961)	C	MIR3	SINE/MIR	(39)	169	85	3034928
261	24.5	19.7	2.0	chr4	175999242	175999341	(14215214)	+	MamTip2	DNA/hAT-Tip100	84	205	(100)	3034931
228	20.6	13.6	2.9	chr4	181150139	181150243	(9064312)	+	CR1-16_AMi	LINE/CR1	186	303	(548)	3041710
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
497	28.3	13.7	8.9	chr4	184537191	184537727	(5676828)	+	L1M6	LINE/L1	43	613	(5883)	3046748
1723	15.4	7.5	0.3	chr4	184537728	184538047	(5676508)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3046749
2179	18.6	4.3	6.9	chr4	185933362	185933839	(4280716)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	3048948
907	25.8	10.8	4.7	chr4	186216614	186216975	(3997580)	C	MLT1E2	LTR/ERVL-MaLR	(177)	450	64	3049361
25	24.9	4.4	5.0	chr5	612198	612332	(180925927)	+	(CCGCC)n	Simple_repeat	1	141	(0)	3055570
510	25.3	3.1	3.6	chr5	10249377	10249590	(171288669)	C	MIR	SINE/MIR	(32)	236	18	3066553
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
669	18.4	7.8	10.4	chr5	14131791	14131965	(167406294)	+	L5	LINE/RTE-X	2088	2259	(6)	3071838
12	26.1	2.2	2.2	chr5	14143247	14143291	(167394968)	+	(CTTTC)n	Simple_repeat	1	46	(0)	3071857
286	27.9	13.8	2.0	chr5	14147165	14147326	(167390933)	C	MIRb	SINE/MIR	(31)	177	10	3071862
181	31.7	11.1	3.2	chr5	14154524	14154647	(167383612)	C	MamRTE1	LINE/RTE-BovB	(3530)	282	148	3071871
5901	21.1	6.9	4.4	chr5	14155184	14156718	(167381541)	C	L1MC4	LINE/L1	(76)	7966	6390	3071872
482	23.7	13.1	6.5	chr5	14229229	14229413	(167308846)	C	MER58A	DNA/hAT-Charlie	(17)	207	9	3071967
207	25.4	12.5	0.0	chr5	14579759	14579821	(166958438)	C	L2c	LINE/L2	(35)	3352	3281	3072377
632	26.2	9.2	0.5	chr5	14579928	14580115	(166958144)	C	MIR	SINE/MIR	(30)	232	27	3072378
279	30.7	0.0	11.6	chr5	15008720	15008892	(166529367)	+	MamGypsy2-LTR	LTR/Gypsy	7	159	(24)	3073033
331	15.5	4.9	0.0	chr5	16884791	16884848	(164653411)	C	MER20	DNA/hAT-Charlie	(4)	215	155	3075704
3648	15.2	2.5	7.1	chr5	16890217	16890562	(164647697)	+	L1MB7	LINE/L1	5472	5819	(365)	3075715
484	28.3	6.2	3.2	chr5	16894396	16894552	(164643707)	+	MIR	SINE/MIR	35	196	(66)	3075725
2236	12.0	0.3	0.3	chr5	32157695	32157978	(149380281)	+	AluSq2	SINE/Alu	1	284	(29)	3096279
47	0.0	0.0	0.0	chr5	32157979	32158021	(149380238)	+	(AAAT)n	Simple_repeat	1	43	(0)	3096280
44	0.0	0.0	0.0	chr5	32158024	32158061	(149380198)	+	(AC)n	Simple_repeat	1	38	(0)	3096281
43	0.0	0.0	0.0	chr5	32158092	32158130	(149380129)	+	(AAAT)n	Simple_repeat	1	39	(0)	3096282
49	0.0	0.0	0.0	chr5	32158133	32158174	(149380085)	+	(AC)n	Simple_repeat	1	42	(0)	3096283
887	16.5	3.0	4.9	chr5	32193444	32193647	(149344612)	C	L1MB8	LINE/L1	(41)	6137	5938	3096372
2247	10.8	0.0	0.3	chr5	32367152	32367437	(149170822)	+	AluSq2	SINE/Alu	1	285	(28)	3096702
51	0.0	1.9	1.8	chr5	32367438	32367491	(149170768)	+	(AAAT)n	Simple_repeat	1	55	(0)	3096703
1460	17.4	2.9	5.2	chr5	32367492	32367693	(149170566)	C	AluJo	SINE/Alu	(83)	229	21	3096701
1452	27.5	3.4	1.5	chr5	32464903	32465311	(149072948)	C	MER20B	DNA/hAT-Charlie	(363)	420	4	3096905
259	31.2	1.0	3.0	chr5	33236251	33236349	(148301910)	C	L3	LINE/CR1	(192)	3907	3811	3098025
28	18.4	5.9	0.0	chr5	33236571	33236638	(148301621)	+	(TA)n	Simple_repeat	1	72	(0)	3098026
655	30.7	8.3	0.7	chr5	34595545	34595833	(146942426)	+	L2a	LINE/L2	3111	3423	(3)	3100062
2290	8.4	0.7	0.0	chr5	34595870	34596153	(146942106)	+	AluSg	SINE/Alu	1	286	(24)	3100063
4179	12.2	1.4	2.5	chr5	34626142	34626811	(146911448)	+	Tigger3b	DNA/TcMar-Tigger	1	662	(569)	3100125
322	28.0	15.1	0.0	chr5	34684243	34684399	(146853860)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	3100224
2014	23.4	3.2	3.5	chr5	36078749	36079756	(145458503)	C	L1PA17	LINE/L1	(4799)	2136	1227	3102260
273	32.8	3.7	1.5	chr5	36502669	36502801	(145035458)	+	AmnSINE1	SINE/5S-Deu-L2	268	403	(172)	3102913
2103	13.1	9.3	1.7	chr5	36740801	36741158	(144797101)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	3	3103272
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
618	24.7	4.8	2.2	chr5	38379413	38379697	(143158562)	C	LTR48B	LTR/ERV1	(422)	365	1	3106038
16	16.8	0.0	0.0	chr5	38379823	38379850	(143158409)	+	A-rich	Low_complexity	1	28	(0)	3106039
1125	18.7	19.0	0.0	chr5	38379928	38380200	(143158059)	C	MER58B	DNA/hAT-Charlie	(4)	337	1	3106040
481	25.6	6.2	0.8	chr5	38550638	38550759	(142987500)	C	L2a	LINE/L2	(2)	3424	3296	3106284
273	26.8	13.4	5.3	chr5	38550762	38550911	(142987348)	+	MIR3	SINE/MIR	22	185	(23)	3106285
204	35.4	3.1	6.8	chr5	38783371	38783542	(142754717)	+	MIR3	SINE/MIR	2	159	(49)	3106667
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
1650	17.9	0.3	2.0	chr5	40802257	40802553	(140735706)	C	AluJr4	SINE/Alu	(20)	292	1	3109441
491	28.5	8.0	10.4	chr5	40802554	40802599	(140735660)	C	Chap1_Mam	DNA/hAT-Charlie	(182)	160	124	3109440
12	23.3	0.0	0.0	chr5	40835471	40835505	(140702754)	+	(TTGCTG)n	Simple_repeat	1	35	(0)	3109515
413	36.9	10.9	3.5	chr5	41746580	41747380	(139790879)	+	L2c	LINE/L2	2259	3123	(264)	3110783
194	33.3	10.4	0.0	chr5	41747412	41747480	(139790779)	C	L2c	LINE/L2	(13)	3362	3286	3110784
255	25.7	16.8	6.4	chr5	41747541	41747773	(139790486)	C	L2c	LINE/L2	(196)	3191	2930	3110784
14	11.2	3.5	0.0	chr5	43121157	43121185	(138417074)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3112576
14432	14.2	2.0	3.8	chr5	43571513	43574022	(137964237)	C	LTR49-int	LTR/ERV1	(87)	6244	3774	3113279
280	28.0	2.1	2.1	chr5	52983882	52983976	(128554283)	+	MLT1M	LTR/ERVL-MaLR	374	468	(204)	3119670
355	28.5	6.8	0.8	chr5	53038656	53038779	(128499480)	+	MIR1_Amn	SINE/MIR	20	151	(79)	3119754
26	20.5	0.0	0.0	chr5	53480173	53480231	(128058028)	+	(CA)n	Simple_repeat	1	59	(0)	3120330
533	31.8	4.8	2.9	chr5	54302288	54302491	(127235768)	+	MIRb	SINE/MIR	31	238	(30)	3121515
1070	22.2	2.6	1.3	chr5	54387895	54388122	(127150137)	+	MIR	SINE/MIR	32	262	(0)	3121634
1953	14.3	3.6	2.0	chr5	54390656	54391005	(127147254)	+	THE1B	LTR/ERVL-MaLR	8	363	(1)	3121639
428	29.9	4.5	4.5	chr5	54391046	54391290	(127146969)	+	L1ME3C	LINE/L1	4783	5027	(1119)	3121640
1642	16.3	1.4	7.2	chr5	54722752	54723058	(126815201)	C	AluJb	SINE/Alu	(22)	290	2	3122174
14	17.9	5.1	0.0	chr5	55307834	55307872	(126230387)	+	A-rich	Low_complexity	1	41	(0)	3123044
244	17.7	3.1	11.4	chr5	56440630	56440699	(125097560)	C	Charlie15a	DNA/hAT-Charlie	(72)	152	89	3125035
306	29.9	11.2	1.6	chr5	56440756	56440884	(125097375)	C	MIRc	SINE/MIR	(117)	151	9	3125036
201	23.4	13.5	3.8	chr5	56608905	56608984	(124929275)	C	MIRb	SINE/MIR	(83)	185	97	3125296
627	30.1	8.8	1.9	chr5	56824211	56824569	(124713690)	+	Tigger15a	DNA/TcMar-Tigger	37	422	(293)	3125619
537	22.2	13.1	6.7	chr5	57042511	57042587	(124495672)	C	MER45A	DNA/hAT-Tip100	(85)	93	3	3125968
282	32.7	11.6	1.6	chr5	57042599	57042915	(124495344)	+	L2	LINE/L2	2488	2840	(579)	3125962
17	15.0	4.3	2.1	chr5	57173958	57174003	(124364256)	+	(CTCC)n	Simple_repeat	1	48	(0)	3126300
1256	21.0	1.9	2.2	chr5	57494779	57495094	(124043165)	C	MLT1H	LTR/ERVL-MaLR	(228)	321	7	3126847
23750	8.3	0.9	0.7	chr5	59302384	59306532	(122231727)	C	L1PB1	LINE/L1	(4)	6863	2681	3129342
342	27.7	7.0	0.6	chr5	59317408	59317567	(122220692)	C	MamGypsy2-LTR	LTR/Gypsy	(7)	176	6	3129346
357	33.0	11.5	6.1	chr5	61425443	61425973	(120112286)	C	L2c	LINE/L2	(18)	3369	2822	3132254
1433	11.6	1.4	0.0	chr5	66142511	66142726	(115395533)	C	L1PA14	LINE/L1	(0)	6161	5943	3139017
2612	20.2	8.6	5.6	chr5	66142727	66143196	(115395063)	C	Charlie1a	DNA/hAT-Charlie	(330)	1125	623	3139016
13	17.0	3.0	0.0	chr5	66144345	66144377	(115393882)	+	G-rich	Low_complexity	1	34	(0)	3139018
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
13	30.8	0.0	3.2	chr5	66144565	66144627	(115393632)	+	G-rich	Low_complexity	1	63	(0)	3139020
1269	7.5	13.0	6.5	chr5	66306656	66306869	(115231390)	C	MER30	DNA/hAT-Charlie	(0)	230	1	3139254
567	29.9	11.4	2.9	chr5	66633768	66634046	(114904213)	+	L4_A_Mam	LINE/RTE-X	4387	4705	(285)	3139726
2198	13.8	0.3	0.0	chr5	66634047	66634358	(114903901)	C	AluSp	SINE/Alu	(0)	313	1	3139727
299	35.4	0.7	0.0	chr5	66981699	66981842	(114556417)	C	L4_C_Mam	LINE/RTE-X	(1458)	3680	3536	3140215
375	29.3	4.5	3.8	chr5	66982010	66982156	(114556103)	C	MIRb	SINE/MIR	(84)	184	49	3140217
375	25.0	4.2	9.3	chr5	67015957	67016106	(114522153)	C	L2c	LINE/L2	(1)	3386	3245	3140258
2202	10.4	0.3	0.3	chr5	68202269	68202556	(113335703)	C	AluSx3	SINE/Alu	(23)	288	1	3141914
295	20.4	0.0	0.0	chr5	68506886	68506934	(113031325)	C	L2b	LINE/L2	(3)	3372	3324	3142357
211	26.3	3.4	0.0	chr5	68507015	68507071	(113031188)	+	L2a	LINE/L2	3366	3424	(2)	3142358
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
17	15.3	0.0	0.0	chr5	69217422	69217450	(112320809)	+	(T)n	Simple_repeat	1	29	(0)	3143534
901	23.9	9.2	3.4	chr5	69521162	69521486	(112016773)	C	L1ME3G	LINE/L1	(246)	678	333	3144235
933	14.7	1.9	2.5	chr5	69521488	69521644	(112016615)	+	AluJo	SINE/Alu	134	289	(23)	3144236
1656	14.9	1.4	2.8	chr5	71693728	71694011	(109844248)	C	L1MB2	LINE/L1	(1)	6170	5891	3147922
13	22.1	4.1	2.0	chr5	72209571	72209619	(109328640)	+	(TGTGC)n	Simple_repeat	1	51	(0)	3148633
17	20.3	0.0	0.0	chr5	72209837	72209860	(109328399)	+	A-rich	Low_complexity	1	24	(0)	3148634
1018	18.7	0.6	0.6	chr5	72209861	72210043	(109328216)	+	FRAM	SINE/Alu	1	176	(0)	3148635
780	23.2	1.3	0.6	chr5	73273310	73273465	(108264794)	+	MER5A	DNA/hAT-Charlie	4	160	(29)	3150254
339	26.2	5.4	5.4	chr5	73281532	73281660	(108256599)	C	UCON62	DNA?	(36)	141	13	3150264
968	28.3	13.4	4.0	chr5	73281774	73282270	(108255989)	+	MARNA	DNA/TcMar-Mariner	17	567	(19)	3150265
17	10.4	3.1	0.0	chr5	73378384	73378415	(108159844)	+	(CTCAC)n	Simple_repeat	1	33	(0)	3150395
185	31.6	2.5	1.2	chr5	74631985	74632064	(106906195)	C	MIR3	SINE/MIR	(20)	188	108	3152263
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
433	28.5	8.1	6.5	chr5	77133116	77133440	(104404819)	+	MLT1H2	LTR/ERVL-MaLR	101	533	(16)	3156245
233	34.3	4.5	6.3	chr5	77169236	77169339	(104368920)	C	L2c	LINE/L2	(172)	3215	3120	3156313
26	0.0	3.5	0.0	chr5	77301888	77301916	(104236343)	+	(GTTTT)n	Simple_repeat	1	30	(0)	3156505
29	31.5	0.0	7.3	chr5	77630068	77630145	(103908114)	+	(GGCGG)n	Simple_repeat	1	191	(0)	3156915
27	19.2	4.4	5.9	chr5	77630146	77630258	(103908001)	+	G-rich	Low_complexity	1	118	(0)	3156916
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
425	20.6	4.5	9.1	chr5	78602768	78602875	(102935384)	C	MIRb	SINE/MIR	(0)	268	165	3158312
385	24.1	12.4	2.8	chr5	78638542	78638686	(102899573)	+	MamSINE1	SINE/tRNA-RTE	22	182	(108)	3158365
54	22.9	1.4	2.0	chr5	79134001	79134145	(102404114)	+	GA-rich	Low_complexity	1	147	(0)	3159133
2159	18.8	4.4	1.2	chr5	79479252	79479740	(102058519)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3159807
620	22.7	10.2	3.1	chr5	79508201	79508427	(102029832)	+	MER112	DNA/hAT-Charlie	2	246	(15)	3159869
471	30.8	7.5	9.0	chr5	79508568	79508951	(102029308)	+	L2c	LINE/L2	3010	3387	(0)	3159868
2550	6.3	0.3	0.0	chr5	79611683	79611982	(101926277)	C	AluSg	SINE/Alu	(9)	301	1	3160093
326	38.8	10.4	3.9	chr5	79639007	79639951	(101898308)	C	L2	LINE/L2	(1667)	1752	740	3160140
2759	15.1	8.4	0.3	chr5	80181681	80182262	(101355997)	+	LTR62	LTR/ERVL	76	704	(5)	3161010
2412	17.0	2.3	1.1	chr5	80644974	80645407	(100892852)	+	MER65C	LTR/ERV1	23	461	(0)	3161972
394	27.6	7.9	1.9	chr5	81172914	81173068	(100365191)	+	MLT1K	LTR/ERVL-MaLR	425	589	(6)	3162788
54	0.0	0.0	0.0	chr5	81736144	81736189	(99802070)	+	(AC)n	Simple_repeat	1	46	(0)	3163544
271	22.4	1.3	3.3	chr5	81736295	81736378	(99801881)	+	L2a	LINE/L2	3302	3426	(0)	3163545
790	24.6	5.8	1.4	chr5	82148037	82148250	(99390009)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	3164188
216	39.0	9.9	1.6	chr5	82148463	82149028	(99389231)	+	L2	LINE/L2	1721	2338	(1081)	3164189
245	34.0	1.4	0.0	chr5	82886218	82886334	(98651925)	C	L2a	LINE/L2	(0)	3426	3257	3165247
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
281	29.2	15.8	1.3	chr5	90390509	90390664	(91147595)	+	MIR	SINE/MIR	6	188	(74)	3174690
22	2.8	2.4	7.0	chr5	91380210	91380251	(90158008)	+	(CCG)n	Simple_repeat	1	43	(0)	3176168
31	3.3	0.0	0.0	chr5	93582772	93582802	(87955457)	+	(GT)n	Simple_repeat	1	31	(0)	3178831
43	0.0	0.0	0.0	chr5	93606252	93606288	(87931971)	+	(AC)n	Simple_repeat	1	37	(0)	3178856
4448	18.7	5.8	3.8	chr5	93967813	93969233	(87569026)	+	L1MCa	LINE/L1	592	2139	(4612)	3179277
411	29.3	5.7	1.7	chr5	96150023	96150140	(85388119)	C	L2b	LINE/L2	(10)	3365	3243	3182200
420	28.4	7.4	10.1	chr5	96150155	96150542	(85387717)	+	LTR78	LTR/ERV1	1	377	(927)	3182201
289	28.1	3.1	1.1	chr5	96200470	96200562	(85337697)	+	L2a	LINE/L2	3273	3423	(3)	3182254
536	26.1	18.2	0.0	chr5	96200672	96200855	(85337404)	+	MIR	SINE/MIR	30	254	(8)	3182255
507	23.3	8.1	4.1	chr5	96745944	96746168	(84792091)	C	MIRc	SINE/MIR	(24)	244	5	3183052
202	29.9	8.2	0.0	chr5	96780968	96781034	(84757225)	C	MIR	SINE/MIR	(106)	156	84	3183090
53	0.0	0.0	0.0	chr5	96818894	96818941	(84719318)	+	(ATTT)n	Simple_repeat	1	48	(0)	3183150
2333	7.8	0.0	0.4	chr5	96818942	96819222	(84719037)	C	AluSc	SINE/Alu	(28)	281	2	3183151
35	0.0	0.0	0.0	chr5	96856366	96856395	(84681864)	+	(AG)n	Simple_repeat	1	30	(0)	3183217
324	37.7	2.7	4.0	chr5	96876827	96876950	(84661309)	+	MIR3	SINE/MIR	4	127	(141)	3183252
2189	12.0	0.0	0.0	chr5	96876951	96877274	(84660985)	C	AluSx	SINE/Alu	(0)	312	1	3183253
408	37.0	6.8	3.5	chr5	99019963	99020273	(82517986)	+	HAL1ME	LINE/L1	9	330	(2135)	3185925
2700	30.9	7.6	2.1	chr5	99900253	99901357	(81636902)	C	ERVL-E-int	LTR/ERVL	(1258)	4396	3162	3187045
13	20.8	7.8	3.6	chr5	102296361	102296437	(79241822)	+	(AGCCTCC)n	Simple_repeat	1	83	(0)	3189947
817	33.0	4.8	6.0	chr5	102651621	102652132	(78886127)	+	L2	LINE/L2	2229	2733	(686)	3190397
16	9.0	0.0	9.3	chr5	102864577	102864619	(78673640)	+	(TTTTG)n	Simple_repeat	1	43	(0)	3190678
8733	23.0	8.4	2.7	chr5	103368162	103370152	(78168107)	C	L1M4b	LINE/L1	(4625)	2242	158	3191347
741	21.5	1.8	3.0	chr5	107658687	107658854	(73879405)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	3196622
217	27.9	8.0	0.0	chr5	108748072	108748165	(72790094)	C	L2c	LINE/L2	(23)	3403	3276	3198087
1786	27.7	6.4	4.1	chr5	109468126	109468878	(72069381)	+	L1ME4b	LINE/L1	107	890	(2)	3199027
294	16.9	12.2	0.0	chr5	109469016	109469080	(72069179)	+	MER112	DNA/hAT-Charlie	1	74	(187)	3199029
34	0.0	0.0	2.8	chr5	109469084	109469119	(72069140)	+	(AAAG)n	Simple_repeat	1	36	(0)	3199030
2585	14.7	0.2	0.9	chr5	109582020	109582438	(71955821)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2303	3199189
350	19.4	0.0	0.0	chr5	109582463	109582524	(71955735)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(1006)	62	1	3199190
890	31.5	3.8	0.4	chr5	109582526	109582805	(71955454)	C	ERVL-B4-int	LTR/ERVL	(2271)	3396	3107	3199188
20	25.9	5.6	1.1	chr5	111224137	111224183	(70314076)	+	G-rich	Low_complexity	1	91	(0)	3201161
13	15.8	2.6	5.0	chr5	111224184	111224222	(70314037)	+	GA-rich	Low_complexity	1	40	(0)	3201162
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
1940	21.9	2.4	7.3	chr5	112733222	112733752	(68804507)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	3203199
618	26.0	4.4	3.9	chr5	112960878	112961057	(68577202)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	332	3203615
285	31.5	4.0	4.7	chr5	112961091	112961240	(68577019)	C	MLT1J	LTR/ERVL-MaLR	(264)	248	100	3203615
184	33.0	11.5	1.0	chr5	113234899	113234999	(68303260)	+	AmnSINE1	SINE/5S-Deu-L2	218	330	(245)	3203999
13	14.3	2.3	6.7	chr5	113294612	113294655	(68243604)	+	(GGCGC)n	Simple_repeat	1	45	(0)	3204071
388	30.2	1.7	0.8	chr5	113489230	113489349	(68048910)	+	MIR	SINE/MIR	142	262	(0)	3204365
476	27.1	12.4	1.3	chr5	113489329	113489485	(68048774)	C	MIR	SINE/MIR	(87)	181	5	3204366
1067	23.9	21.1	4.3	chr5	113489583	113490068	(68048191)	+	MLT1G	LTR/ERVL-MaLR	3	591	(0)	3204367
233	18.4	0.0	0.0	chr5	113510906	113510943	(68027316)	+	MamTip2	DNA/hAT-Tip100	178	215	(90)	3204392
1239	24.9	12.5	1.7	chr5	115844209	115844628	(65693631)	C	L2a	LINE/L2	(10)	3416	2945	3207362
270	32.0	2.4	5.4	chr5	115844647	115844775	(65693484)	+	L2c	LINE/L2	3047	3171	(216)	3207363
1471	17.6	2.7	8.9	chr5	115856320	115856432	(65681827)	C	L1MA7	LINE/L1	(1)	6290	6179	3207384
15	23.0	0.0	0.0	chr5	116510690	116510726	(65027533)	+	(CTCC)n	Simple_repeat	1	37	(0)	3208216
311	30.5	0.9	1.9	chr5	116942629	116942735	(64595524)	C	MER131	DNA?	(66)	149	44	3208911
608	26.4	13.4	0.0	chr5	118962697	118962897	(62575362)	C	MIRb	SINE/MIR	(11)	257	26	3211569
6189	17.8	5.8	2.2	chr5	118967082	118968363	(62569896)	+	L1MC4a	LINE/L1	6401	7731	(151)	3211576
884	32.9	13.5	2.0	chr5	119322627	119323323	(62214936)	+	L2b	LINE/L2	2137	2926	(493)	3212169
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
286	30.6	3.3	0.7	chr5	122333292	122333439	(59204820)	+	UCON29	DNA/PiggyBac?	1	152	(287)	3215768
603	26.6	3.0	1.0	chr5	122408801	122408992	(59129267)	C	MIRb	SINE/MIR	(33)	235	32	3215860
248	35.7	10.1	8.0	chr5	122493927	122494188	(59044071)	+	L2b	LINE/L2	3108	3375	(0)	3215969
263	31.0	2.2	1.1	chr5	122494247	122494334	(59043925)	+	L2c	LINE/L2	3262	3350	(37)	3215970
595	18.4	0.0	0.0	chr5	122494340	122494426	(59043833)	+	AluJr	SINE/Alu	1	87	(225)	3215971
25	23.3	0.0	4.0	chr5	122774960	122775035	(58763224)	+	G-rich	Low_complexity	1	76	(0)	3216418
180	25.9	13.8	2.4	chr5	122777144	122777226	(58761033)	+	MER5A	DNA/hAT-Charlie	1	94	(95)	3216420
497	23.4	3.9	0.0	chr5	122777273	122777396	(58760863)	C	MER5A1	DNA/hAT-Charlie	(37)	129	1	3216421
3730	20.4	3.5	2.3	chr5	123537691	123538520	(57999739)	C	L1ME2	LINE/L1	(5)	7019	6183	3217529
245	29.2	1.5	1.5	chr5	123868392	123868457	(57669802)	C	MamSINE1	SINE/tRNA-RTE	(206)	84	19	3217935
286	28.2	14.9	7.1	chr5	124612506	124612745	(56925514)	+	MamTip2	DNA/hAT-Tip100	40	301	(4)	3218875
190	19.2	16.1	14.1	chr5	124629647	124629767	(56908492)	+	L2a	LINE/L2	3248	3371	(4)	3218892
2386	10.3	0.0	2.0	chr5	124664894	124665195	(56873064)	+	AluSx3	SINE/Alu	1	296	(15)	3218937
598	25.0	0.0	4.0	chr5	124665198	124665347	(56872912)	+	MER63B	DNA/hAT-Blackjack	293	436	(0)	3218938
30	0.0	0.0	0.0	chr5	124743855	124743882	(56794377)	+	(AGC)n	Simple_repeat	1	28	(0)	3219042
18	25.2	0.0	0.0	chr5	124744003	124744044	(56794215)	+	(CA)n	Simple_repeat	1	42	(0)	3219043
14	9.6	0.0	0.0	chr5	124744120	124744142	(56794117)	+	(CTC)n	Simple_repeat	1	23	(0)	3219044
1167	29.4	2.1	6.1	chr5	124930568	124931221	(56607038)	C	ERV3-16A3_I-int	LTR/ERVL	(2123)	3544	2833	3219374
397	35.7	5.4	0.6	chr5	125461918	125462075	(56076184)	+	L2b	LINE/L2	3210	3375	(0)	3220078
36	0.0	0.0	0.0	chr5	125550455	125550485	(55987774)	+	(GT)n	Simple_repeat	1	31	(0)	3220180
1749	16.9	2.9	2.6	chr5	126525684	126526023	(55012236)	+	MER61A	LTR/ERV1	1	341	(0)	3221337
229	26.6	1.5	0.0	chr5	126884486	126884549	(54653710)	+	L2-1_AMi	LINE/L2	457	521	(714)	3222135
456	31.5	8.0	5.5	chr5	126965104	126965358	(54572901)	C	MIRb	SINE/MIR	(5)	263	2	3222237
561	30.7	2.6	2.6	chr5	127041734	127041927	(54496332)	+	MIRc	SINE/MIR	20	213	(55)	3222348
232	32.3	1.1	5.1	chr5	127206323	127206420	(54331839)	C	UCON132b	DNA/hAT-Tip100	(45)	103	10	3222534
18	32.4	1.9	3.7	chr5	128538382	128538488	(52999771)	+	G-rich	Low_complexity	1	109	(0)	3224262
17	16.8	2.5	0.0	chr5	128965434	128965473	(52572786)	+	G-rich	Low_complexity	1	41	(0)	3224771
221	30.2	4.4	4.4	chr5	131636150	131636239	(49902020)	+	L2c	LINE/L2	3277	3366	(21)	3228297
498	20.9	9.2	5.5	chr5	132190262	132190427	(49347832)	+	LTR50	LTR/ERVL	1	174	(357)	3229023
954	21.3	8.7	0.2	chr5	132190538	132190828	(49347431)	+	L1ME3B	LINE/L1	4936	5263	(883)	3229022
2004	11.8	0.0	0.0	chr5	132319069	132319331	(49218928)	+	AluSx1	SINE/Alu	50	312	(0)	3229187
1627	15.2	8.5	0.0	chr5	132363131	132363400	(49174859)	+	AluJb	SINE/Alu	1	295	(17)	3229265
1308	32.1	5.0	3.7	chr5	132363401	132363973	(49174286)	+	L2a	LINE/L2	2849	3425	(1)	3229258
17	30.3	0.0	1.6	chr5	132963394	132963455	(48574804)	+	(GGC)n	Simple_repeat	1	62	(0)	3230230
264	33.0	3.7	2.8	chr5	133052684	133052789	(48485470)	+	L2b	LINE/L2	3266	3372	(3)	3230469
1826	15.9	3.0	0.0	chr5	134243747	134244042	(47294217)	C	AluJr	SINE/Alu	(6)	306	2	3232160
335	29.7	5.1	0.9	chr5	134392426	134392537	(47145722)	C	MamRep137	DNA/TcMar-Tigger	(148)	362	246	3232465
458	25.6	15.5	1.6	chr5	134392679	134392744	(47145515)	C	MIR	SINE/MIR	(27)	235	165	3232466
2303	8.2	0.0	0.7	chr5	134392745	134393035	(47145224)	+	AluSq	SINE/Alu	10	298	(15)	3232467
1495	17.3	2.9	1.5	chr5	134396435	134396705	(47141554)	C	AluJo	SINE/Alu	(36)	276	2	3232470
27	24.4	1.3	1.3	chr5	134850919	134850994	(46687265)	+	(CATA)n	Simple_repeat	1	77	(0)	3233510
45	0.0	0.0	0.0	chr5	134850995	134851035	(46687224)	+	(TATT)n	Simple_repeat	1	41	(0)	3233511
923	14.5	0.0	0.0	chr5	134851093	134851223	(46687036)	C	AluSx	SINE/Alu	(177)	135	5	3233512
1790	17.4	6.3	0.3	chr5	136109649	136109989	(45428270)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	3	3235237
5495	10.0	0.9	0.5	chr5	136811926	136813473	(44724786)	+	L1PB1	LINE/L1	4604	6151	(0)	3236164
259	30.6	5.3	3.5	chr5	137147311	137147371	(44390888)	+	L1ME3G	LINE/L1	433	496	(428)	3236571
1381	21.6	3.8	6.7	chr5	137147372	137147773	(44390486)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3236572
363	35.6	2.5	2.5	chr5	137563824	137564019	(43974240)	+	Eulor8	DNA/TcMar?	163	358	(204)	3237136
2021	18.4	12.6	3.3	chr5	137649153	137649663	(43888596)	+	MLT1F1	LTR/ERVL-MaLR	5	569	(0)	3237275
219	29.2	6.2	11.8	chr5	137833434	137833569	(43704690)	+	MIR3	SINE/MIR	66	193	(15)	3237599
218	42.8	5.9	4.2	chr5	137833689	137833905	(43704354)	C	MamSINE1	SINE/tRNA-RTE	(2)	288	68	3237600
19	24.5	1.3	5.0	chr5	138033058	138033158	(43505101)	+	(GGCGG)n	Simple_repeat	1	97	(0)	3237963
19	18.9	0.0	0.0	chr5	138449008	138449043	(43089216)	+	(CA)n	Simple_repeat	1	36	(0)	3238891
15	4.1	4.0	0.0	chr5	138465013	138465037	(43073222)	+	(AGGG)n	Simple_repeat	1	26	(0)	3238915
287	22.5	1.2	3.6	chr5	139279936	139280018	(42258241)	C	MER3	DNA/hAT-Charlie	(128)	81	1	3240477
1087	20.3	11.7	0.7	chr5	139280027	139280329	(42257930)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	3240478
806	31.9	3.9	0.7	chr5	139969284	139969555	(41568704)	+	L3b	LINE/CR1	3752	4032	(67)	3241790
13	20.8	0.0	0.0	chr5	140346653	140346685	(41191574)	+	(GCCCC)n	Simple_repeat	1	33	(0)	3242426
205	21.4	9.2	4.4	chr5	140700148	140700229	(40838030)	+	MIR3	SINE/MIR	112	192	(38)	3243090
196	22.9	2.0	0.0	chr5	140700414	140700461	(40837798)	C	MamRTE1	LINE/RTE-BovB	(3740)	72	24	3243091
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
636	14.9	1.6	1.6	chr5	140726264	140726386	(40811873)	+	L1MC3	LINE/L1	6737	6859	(926)	3243152
22	23.6	1.5	1.5	chr5	141682231	141682296	(39855963)	+	(CCCGC)n	Simple_repeat	1	67	(0)	3244398
725	16.6	13.7	2.0	chr5	141969702	141969849	(39568410)	C	MER5B	DNA/hAT-Charlie	(5)	173	6	3244974
217	29.0	5.1	10.6	chr5	142223712	142223788	(39314471)	C	L2c	LINE/L2	(68)	3319	3250	3245486
324	30.8	1.9	0.0	chr5	142223788	142223805	(39314454)	C	MIRb	SINE/MIR	(0)	268	251	3245488
1540	15.1	0.0	1.7	chr5	142223806	142224037	(39314222)	+	AluJb	SINE/Alu	1	228	(84)	3245489
341	28.4	1.2	0.0	chr5	142224038	142224127	(39314132)	C	MIR	SINE/MIR	(18)	250	154	3245488
507	24.9	15.3	8.1	chr5	142318879	142319101	(39219158)	C	MIR	SINE/MIR	(8)	254	13	3245717
13	11.5	12.2	1.8	chr5	142357141	142357189	(39181070)	+	(TCCGCC)n	Simple_repeat	1	55	(0)	3245797
317	31.2	2.5	6.0	chr5	142769568	142769734	(38768525)	C	L2a	LINE/L2	(33)	3393	3206	3246638
483	28.5	4.5	5.3	chr5	145975732	145975965	(35562294)	+	MIR	SINE/MIR	21	247	(15)	3251632
351	38.8	6.6	5.2	chr5	147779819	147780237	(33758022)	C	L3b	LINE/CR1	(91)	5141	4717	3254831
21	23.4	0.0	0.0	chr5	147782642	147782692	(33755567)	+	(CAG)n	Simple_repeat	1	51	(0)	3254832
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
839	27.7	8.2	8.8	chr5	149445709	149446074	(32092185)	C	MLT1H	LTR/ERVL-MaLR	(85)	464	83	3257748
261	28.9	4.9	4.9	chr5	149486132	149486233	(32052026)	+	MLT1J1	LTR/ERVL-MaLR	66	167	(277)	3257860
689	26.2	4.8	1.6	chr5	149959103	149959346	(31578913)	+	MIR	SINE/MIR	1	252	(10)	3258933
322	30.7	10.0	3.6	chr5	149959358	149959553	(31578706)	C	MIRc	SINE/MIR	(21)	247	38	3258934
261	26.9	7.1	8.4	chr5	150001510	150001651	(31536608)	C	MIRc	SINE/MIR	(106)	162	23	3259013
888	25.4	4.4	2.8	chr5	150319808	150320144	(31218115)	C	MER113	DNA/hAT-Charlie	(112)	409	65	3259688
1047	26.3	14.1	2.2	chr5	150320145	150320505	(31217754)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	3259689
300	36.4	10.0	2.5	chr5	150449218	150449420	(31088839)	C	MIRb	SINE/MIR	(43)	225	6	3259964
14	18.9	0.0	2.6	chr5	150449424	150449461	(31088798)	+	(CGTGGC)n	Simple_repeat	1	38	(0)	3259965
12	11.1	3.2	3.1	chr5	150778679	150778709	(30759550)	+	(GGAGCT)n	Simple_repeat	1	32	(0)	3260680
6693	7.7	0.6	0.2	chr5	150793142	150794684	(30743575)	+	L1PB1	LINE/L1	4462	6009	(142)	3260707
294	31.2	12.5	0.7	chr5	151157894	151158048	(30380211)	C	MIR3	SINE/MIR	(3)	205	30	3261276
327	25.7	10.5	2.9	chr5	151158122	151158261	(30379998)	C	MIRb	SINE/MIR	(54)	214	63	3261277
1272	23.4	6.0	4.3	chr5	151455641	151456105	(30082154)	C	LTR56	LTR/ERV1	(0)	437	1	3261903
251	23.2	1.4	5.5	chr5	154058519	154058591	(27479668)	C	L3b	LINE/CR1	(603)	4629	4560	3266328
824	25.4	7.8	9.8	chr5	154058600	154058797	(27479462)	C	MLT1J	LTR/ERVL-MaLR	(10)	502	297	3266329
1642	24.6	5.1	3.3	chr5	154058798	154059277	(27478982)	C	LTR16C	LTR/ERVL	(0)	489	1	3266330
251	27.6	1.3	2.6	chr5	154442892	154442969	(27095290)	C	MIR	SINE/MIR	(0)	268	192	3267164
212	33.3	9.2	0.0	chr5	154442971	154443078	(27095181)	C	MIRc	SINE/MIR	(144)	124	6	3267165
29	5.7	0.0	0.0	chr5	154858705	154858741	(26679518)	+	(CAGCCCGC)n	Simple_repeat	1	37	(0)	3268203
13	16.9	0.0	8.5	chr5	157731251	157731297	(23806962)	+	GA-rich	Low_complexity	1	47	(0)	3273268
375	33.1	4.3	0.0	chr5	158120323	158120455	(23417804)	C	MIR3	SINE/MIR	(54)	154	16	3274061
2560	5.2	0.3	1.0	chr5	158174514	158174822	(23363437)	+	AluY	SINE/Alu	1	307	(4)	3274157
319	31.1	3.5	4.0	chr5	158272929	158273156	(23265103)	C	Tigger14a	DNA/TcMar-Tigger	(65)	259	33	3274328
19	27.9	4.0	1.3	chr5	159209582	159209656	(22328603)	+	(GC)n	Simple_repeat	1	78	(0)	3275707
272	34.6	4.2	5.4	chr5	159341792	159341959	(22196300)	C	MIR1_Amn	SINE/MIR	(0)	230	65	3275939
396	32.7	23.1	1.0	chr5	159342137	159342448	(22195811)	C	L2b	LINE/L2	(19)	3356	2955	3275940
2303	9.2	0.0	2.7	chr5	160008560	160008851	(21529408)	+	AluJb	SINE/Alu	1	284	(28)	3277188
59	0.0	0.0	0.0	chr5	160008852	160008904	(21529355)	+	(AAAT)n	Simple_repeat	1	53	(0)	3277189
13	31.6	3.2	0.0	chr5	160119325	160119386	(21418873)	+	(CGC)n	Simple_repeat	1	64	(0)	3277395
1209	22.9	12.1	12.3	chr5	160165663	160166166	(21372093)	+	MLT1K	LTR/ERVL-MaLR	4	506	(89)	3277541
640	23.9	22.4	0.7	chr5	168794642	168795097	(12743162)	+	L2a	LINE/L2	2844	3426	(0)	3290758
558	24.5	10.2	4.5	chr5	169080313	169080534	(12457725)	C	MIRb	SINE/MIR	(0)	268	33	3291212
672	26.3	3.0	2.2	chr5	169907504	169907732	(11630527)	C	MIRb	SINE/MIR	(1)	267	37	3292592
255	29.8	5.1	1.5	chr5	170219796	170219928	(11318331)	C	L2a	LINE/L2	(102)	3324	3187	3293212
663	24.2	9.8	7.7	chr5	170219933	170220192	(11318067)	C	LTR33	LTR/ERVL	(4)	511	246	3293216
1021	24.3	13.9	4.7	chr5	171463266	171463769	(10074490)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	43	3295342
447	32.5	9.5	1.1	chr5	171975579	171975752	(9562507)	+	MIRb	SINE/MIR	73	262	(6)	3296396
2129	22.2	3.2	11.0	chr5	172293106	172293807	(9244452)	C	LTR41	LTR/ERVL	(122)	646	1	3297120
280	32.9	4.0	0.4	chr5	172437428	172437564	(9100695)	C	MIRb	SINE/MIR	(127)	141	1	3297432
40	23.0	3.5	3.4	chr5	172454482	172454622	(9083637)	+	(GCC)n	Simple_repeat	1	146	(0)	3297474
12	22.4	0.0	2.6	chr5	172771386	172771423	(8766836)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	3298156
897	23.1	2.7	2.3	chr5	173316137	173316357	(8221902)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	3299405
230	22.1	11.5	0.0	chr5	173332143	173332219	(8206040)	+	Tigger16a	DNA/TcMar-Tigger	97	183	(774)	3299416
298	28.1	16.5	2.5	chr5	173767906	173768149	(7770110)	+	L2c	LINE/L2	3031	3315	(72)	3300245
247	28.0	0.0	8.5	chr5	173878405	173878486	(7659773)	+	L2c	LINE/L2	3297	3371	(4)	3300489
755	30.9	2.9	2.1	chr5	173878541	173878781	(7659478)	C	MIRb	SINE/MIR	(0)	268	26	3300496
325	32.7	5.2	0.0	chr5	174328691	174328800	(7209459)	+	MIRc	SINE/MIR	115	230	(38)	3301296
346	33.6	3.6	3.7	chr5	174355259	174355484	(7182775)	C	MIRb	SINE/MIR	(30)	238	13	3301343
856	26.4	2.3	1.6	chr5	174426552	174426809	(7111450)	C	MIR	SINE/MIR	(1)	261	2	3301491
206	22.0	4.8	3.3	chr5	174503881	174503941	(7034318)	C	MamRTE1	LINE/RTE-BovB	(2552)	1260	1199	3301609
1396	26.2	11.7	5.5	chr5	174829606	174830167	(6708092)	+	MER77B	LTR/ERVL	1	601	(99)	3302325
355	27.3	1.0	0.0	chr5	175378574	175378672	(6159587)	C	X7A_LINE	LINE/CR1	(50)	217	118	3303328
345	27.2	8.1	1.8	chr5	175378722	175378912	(6159347)	+	MIRb	SINE/MIR	1	195	(35)	3303329
427	29.0	0.0	0.0	chr5	175797987	175798086	(5740173)	C	MIR3	SINE/MIR	(79)	129	30	3304150
509	18.4	16.9	5.6	chr5	175798153	175798313	(5739946)	+	MIRb	SINE/MIR	79	261	(7)	3304151
187	31.1	2.2	3.2	chr5	176533870	176533962	(5004297)	+	L2c	LINE/L2	3049	3140	(247)	3305477
294	33.6	2.6	0.9	chr5	176790160	176790273	(4747986)	+	MIRc	SINE/MIR	37	152	(116)	3305998
28	0.0	0.0	0.0	chr5	176790430	176790456	(4747803)	+	(TCAT)n	Simple_repeat	1	27	(0)	3305999
307	34.8	12.7	1.5	chr5	176790478	176790748	(4747511)	C	L2b	LINE/L2	(42)	3333	3028	3306000
527	17.7	1.1	0.6	chr5	177036009	177036109	(4502150)	C	MLT1F	LTR/ERVL-MaLR	(82)	466	379	3306491
446	27.0	0.9	4.3	chr5	177036210	177036325	(4501934)	C	MLT1F	LTR/ERVL-MaLR	(289)	302	191	3306491
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
2356	19.5	4.8	3.3	chr5	178858901	178859711	(2678548)	C	L1MA9	LINE/L1	(534)	5778	4872	3309952
12	24.9	5.8	0.0	chr5	179796340	179796391	(1741868)	+	(CGCGCCG)n	Simple_repeat	1	55	(0)	3311605
15	20.0	0.0	5.9	chr5	180292171	180292221	(1246038)	+	G-rich	Low_complexity	1	51	(0)	3312366
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
544	32.2	6.0	7.0	chr5	181057045	181057414	(480845)	C	L1M5	LINE/L1	(883)	5263	4907	3313580
325	26.4	3.2	3.2	chr5	181057609	181057733	(480526)	C	L1M5	LINE/L1	(1492)	4654	4530	3313580
2249	26.6	6.1	1.5	chr5	181168056	181168858	(369401)	+	L1MD2	LINE/L1	5474	6346	(13)	3313767
702	0.0	0.0	0.0	chr5	181173650	181173724	(364535)	+	tRNA-Val-GTG	tRNA	1	75	(1)	3313784
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
734	0.0	0.0	0.0	chr5	181187701	181187782	(350477)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3313822
2468	8.0	0.3	0.0	chr5	181188094	181188405	(349854)	+	AluSp	SINE/Alu	1	313	(0)	3313823
670	1.4	0.0	0.0	chr5	181188416	181188488	(349771)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313824
606	5.6	0.0	0.0	chr5	181206868	181206939	(331320)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3313850
671	1.3	0.0	0.0	chr5	181207755	181207830	(330429)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	3313853
313	35.6	6.8	2.1	chr5	181213085	181213422	(324837)	+	L2a	LINE/L2	3005	3359	(67)	3313866
194	31.9	2.8	0.0	chr5	181213451	181213519	(324740)	+	MIR	SINE/MIR	150	220	(42)	3313867
493	21.9	5.5	5.5	chr5	181213528	181213655	(324604)	+	FLAM_A	SINE/Alu	9	136	(6)	3313868
688	0.0	0.0	0.0	chr5	181218270	181218342	(319917)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313881
667	0.0	0.0	0.0	chr5	181221979	181222051	(316208)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	3313889
660	0.0	0.0	0.0	chr5	181222394	181222467	(315792)	C	tRNA-Val-GTG	tRNA	(2)	74	1	3313890
14	25.2	0.0	5.3	chr5	181246451	181246507	(291752)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3313921
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
456	31.3	6.5	2.2	chr6	1721016	1721307	(169084672)	+	X2_LINE	LINE/CR1	1	196	(1212)	3316502
25	8.4	2.6	0.0	chr6	1817109	1817146	(168988833)	+	(AC)n	Simple_repeat	1	39	(0)	3316612
1045	17.8	0.5	0.0	chr6	2447923	2448113	(168357866)	+	MER53	DNA/hAT	1	192	(1)	3317454
890	19.4	2.8	0.0	chr6	2853735	2853909	(167952070)	C	L1MC3	LINE/L1	(391)	7394	7215	3318009
334	11.6	4.2	2.8	chr6	2853920	2853990	(167951989)	C	L1MC3	LINE/L1	(1310)	6475	6404	3318009
388	23.5	13.2	0.8	chr6	2932336	2932468	(167873511)	C	LTR41C	LTR/ERVL	(549)	152	1	3318122
5462	24.1	11.3	5.8	chr6	2932476	2932972	(167873007)	+	BLACKJACK	DNA/hAT-Blackjack	229	733	(2236)	3318123
51	22.4	3.1	5.0	chr6	2999648	2999841	(167806138)	+	G-rich	Low_complexity	1	200	(0)	3318233
14	9.3	0.0	0.0	chr6	4017816	4017838	(166788141)	+	(AAC)n	Simple_repeat	1	23	(0)	3319825
12	5.6	0.0	0.0	chr6	4021388	4021406	(166784573)	+	(GCC)n	Simple_repeat	1	19	(0)	3319829
61	29.6	3.0	5.6	chr6	4135582	4135982	(166669997)	+	G-rich	Low_complexity	1	413	(0)	3320017
207	29.1	5.2	8.3	chr6	4351943	4352062	(166453917)	C	MamTip2	DNA/hAT-Tip100	(79)	226	111	3320308
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
807	31.1	8.2	1.3	chr6	5215146	5215520	(165590459)	+	Tigger10	DNA/TcMar-Tigger	614	1016	(828)	3321694
5171	6.7	1.7	1.5	chr6	5227497	5228150	(165577829)	+	L1PA8	LINE/L1	5514	6168	(4)	3321716
11	14.8	4.9	4.7	chr6	5996328	5996368	(164809611)	+	(CCCCGCT)n	Simple_repeat	1	43	(0)	3322867
4237	13.2	1.8	3.0	chr6	6687670	6688393	(164117586)	C	L1PA17	LINE/L1	(17)	6149	5435	3323759
580	19.8	31.7	3.0	chr6	7587659	7587960	(163218019)	C	MLT1B	LTR/ERVL-MaLR	(0)	467	1	3325410
50	0.0	0.0	0.0	chr6	10423592	10423634	(160382345)	+	(TG)n	Simple_repeat	1	43	(0)	3329457
2349	7.2	0.3	0.3	chr6	10886422	10886713	(159919266)	C	AluSz	SINE/Alu	(20)	292	1	3330389
1601	14.4	2.7	1.6	chr6	11096129	11096382	(159709597)	C	MER1B	DNA/hAT-Charlie	(0)	339	83	3330727
431	10.0	2.8	4.1	chr6	11096610	11096682	(159709297)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	317	3330728
2253	10.0	2.9	0.0	chr6	11096692	11096990	(159708989)	C	AluSp	SINE/Alu	(5)	308	1	3330729
2041	11.4	0.0	4.0	chr6	11434442	11434738	(159371241)	C	AluSx	SINE/Alu	(27)	285	1	3331213
241	34.9	7.8	3.6	chr6	12045032	12045227	(158760752)	+	MamSINE1	SINE/tRNA-RTE	2	206	(84)	3332120
20	0.0	0.0	0.0	chr6	13006661	13006682	(157799297)	+	(AC)n	Simple_repeat	1	22	(0)	3333559
463	30.1	4.9	2.3	chr6	13006695	13006871	(157799108)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	228	3333560
355	20.3	1.4	0.0	chr6	13006929	13006997	(157798982)	C	MLT1I	LTR/ERVL-MaLR	(337)	74	5	3333560
404	24.8	15.3	0.6	chr6	13395536	13395697	(157410282)	+	MIRb	SINE/MIR	76	265	(3)	3334187
16	21.5	2.0	2.0	chr6	15245869	15245918	(155560061)	+	(GCTGGCG)n	Simple_repeat	1	51	(0)	3337658
19	21.4	6.9	1.3	chr6	15248822	15248893	(155557086)	+	(GGC)n	Simple_repeat	1	77	(0)	3337662
344	31.4	14.9	5.5	chr6	15434932	15435389	(155370590)	C	L1MEd	LINE/L1	(6122)	964	456	3337949
935	22.0	15.4	2.7	chr6	15754017	15754569	(155051410)	C	MLT2F	LTR/ERVL	(0)	663	3	3338386
4575	12.0	1.5	2.4	chr6	15956257	15956973	(154849006)	C	MER50	LTR/ERV1	(23)	711	1	3338754
1215	29.3	8.2	2.1	chr6	16005496	16006053	(154799926)	C	MLT1L	LTR/ERVL-MaLR	(5)	605	11	3338838
9544	11.5	1.7	11.6	chr6	16196900	16198653	(154607326)	C	LTR12C	LTR/ERV1	(0)	1579	3	3339137
303	27.0	13.9	7.0	chr6	16627093	16627279	(154178700)	+	MIR3	SINE/MIR	3	204	(4)	3339809
193	28.0	3.1	7.0	chr6	16627284	16627383	(154178596)	C	OldhAT1	DNA/hAT-Ac	(2334)	514	419	3339810
270	29.5	12.3	0.0	chr6	16627366	16627446	(154178533)	+	MamRTE1	LINE/RTE-BovB	3198	3293	(519)	3339805
2452	9.7	0.3	0.3	chr6	16726100	16726397	(154079582)	+	AluSz6	SINE/Alu	2	299	(13)	3339971
261	37.4	7.2	1.8	chr6	16730762	16730903	(154075076)	C	MIR1_Amn	SINE/MIR	(56)	152	4	3339979
310	21.4	4.1	1.4	chr6	16752379	16752449	(154053530)	C	MER5A1	DNA/hAT-Charlie	(59)	107	35	3340005
277	29.9	3.0	0.0	chr6	16752450	16752471	(154053508)	+	MER5A	DNA/hAT-Charlie	93	188	(1)	3340006
295	22.5	9.8	3.2	chr6	17497697	17497820	(153308159)	+	Tigger10	DNA/TcMar-Tigger	827	959	(885)	3341260
1023	31.6	5.3	1.6	chr6	17498051	17498487	(153307492)	+	Tigger10	DNA/TcMar-Tigger	1253	1706	(138)	3341261
234	20.9	4.4	0.0	chr6	18269486	18269528	(152536451)	C	MLT1J2	LTR/ERVL-MaLR	(322)	126	82	3342735
1080	19.8	0.5	0.5	chr6	18327577	18327779	(152478200)	C	MER54B	LTR/ERVL	(490)	303	101	3342880
278	26.1	6.5	4.2	chr6	20198607	20198726	(150607253)	C	Plat_L3	LINE/CR1	(417)	3169	3047	3345582
2517	13.4	1.5	0.5	chr6	20198866	20199262	(150606717)	+	MER57B1	LTR/ERV1	1	401	(0)	3345583
255	18.6	9.2	0.0	chr6	20811286	20811344	(149994635)	+	LTR65	LTR/ERV1	321	385	(284)	3346658
1813	25.4	6.7	5.5	chr6	20811418	20811824	(149994155)	C	L1MC5a	LINE/L1	(415)	2362	1944	3346659
2306	11.4	0.3	0.0	chr6	21391838	21392145	(149413834)	+	AluSq2	SINE/Alu	1	309	(4)	3347568
181	25.0	0.0	0.0	chr6	21586935	21586978	(149219001)	+	L2b	LINE/L2	3328	3371	(4)	3347908
285	30.6	4.8	0.0	chr6	21601736	21601833	(149204146)	+	MIRc	SINE/MIR	26	128	(140)	3347926
191	22.5	14.0	1.2	chr6	21601960	21602040	(149203939)	+	MIRb	SINE/MIR	161	253	(15)	3347927
20	0.0	0.0	0.0	chr6	21750761	21750782	(149055197)	+	(T)n	Simple_repeat	1	22	(0)	3348227
276	24.8	13.1	1.5	chr6	21750975	21751109	(149054870)	C	L1ME4a	LINE/L1	(2)	6122	5970	3348228
13	4.2	8.0	0.0	chr6	21953991	21954015	(148851964)	+	(GTGCA)n	Simple_repeat	1	27	(0)	3348606
14	22.6	0.0	4.4	chr6	21980486	21980530	(148825449)	+	(CCT)n	Simple_repeat	1	45	(0)	3348661
781	18.4	0.0	0.0	chr6	24359617	24359730	(146446249)	+	AluJo	SINE/Alu	3	116	(196)	3351759
16	8.3	0.0	0.0	chr6	24359731	24359756	(146446223)	+	(GGAA)n	Simple_repeat	1	26	(0)	3351760
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
243	33.7	12.5	3.2	chr6	24961011	24961333	(145844646)	C	L2b	LINE/L2	(6)	3369	3039	3352838
382	26.5	1.9	15.2	chr6	25174199	25174376	(145631603)	C	MIR3	SINE/MIR	(9)	199	46	3353192
2557	6.9	0.0	0.3	chr6	25910681	25910986	(144894993)	+	AluY	SINE/Alu	1	305	(6)	3354290
1499	23.8	9.0	6.9	chr6	26029259	26029778	(144776201)	C	MER34	LTR/ERV1	(0)	542	11	3354515
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
623	4.2	0.0	0.0	chr6	26311747	26311818	(144494161)	C	tRNA-Gln-CAA	tRNA	(3)	72	1	3354997
443	24.1	3.3	12.6	chr6	26323092	26323290	(144482689)	+	MER5A	DNA/hAT-Charlie	9	188	(1)	3355025
752	1.2	0.0	0.0	chr6	26327589	26327673	(144478306)	+	tRNA-Ser-TCY	tRNA	1	85	(0)	3355033
2075	10.5	1.4	1.4	chr6	26328471	26328766	(144477213)	C	AluSz	SINE/Alu	(13)	299	4	3355035
18	17.1	0.0	0.0	chr6	26420709	26420741	(144385238)	+	(GT)n	Simple_repeat	1	33	(0)	3355211
181	28.1	6.8	6.8	chr6	26420798	26420885	(144385094)	+	L2c	LINE/L2	3256	3343	(44)	3355212
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
686	0.0	0.0	0.0	chr6	26538054	26538127	(144267852)	+	tRNA-Val-GTG	tRNA	1	74	(2)	3355428
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
384	27.6	15.5	1.6	chr6	26575756	26575943	(144230036)	+	LTR50	LTR/ERVL	42	260	(535)	3355502
1354	19.2	3.9	0.6	chr6	27178168	27178461	(143627518)	+	LTR10B2	LTR/ERV1	201	500	(3)	3356434
1523	3.4	1.6	0.0	chr6	27178469	27178647	(143627332)	+	HERVIP10B3-int	LTR/ERV1	3	184	(7419)	3356434
21	18.4	0.0	2.0	chr6	27251567	27251617	(143554362)	+	G-rich	Low_complexity	1	51	(0)	3356580
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
789	28.9	1.6	2.7	chr6	27279040	27279295	(143526684)	C	LTR16	LTR/ERVL	(140)	298	46	3356636
608	5.5	0.0	0.0	chr6	27280270	27280342	(143525637)	C	tRNA-Val-GTG	tRNA	(3)	73	1	3356638
523	8.2	0.0	0.0	chr6	27293892	27293964	(143512015)	+	tRNA-Ile-ATT	tRNA	1	73	(4)	3356664
18	4.2	0.0	0.0	chr6	27294103	27294127	(143511852)	+	(TCT)n	Simple_repeat	1	25	(0)	3356665
582	6.9	0.0	0.0	chr6	27295433	27295504	(143510475)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	3356668
650	0.0	0.0	0.0	chr6	27332985	27333056	(143472923)	C	tRNA-Met-i	tRNA	(3)	72	1	3356727
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
667	2.8	0.0	0.0	chr6	27519529	27519600	(143286379)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	3357033
678	1.4	0.0	0.0	chr6	27547752	27547823	(143258156)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3357094
1577	6.7	0.0	0.0	chr6	27548668	27548846	(143257133)	+	AluYh3	SINE/Alu	133	311	(0)	3357095
665	1.4	0.0	0.0	chr6	27591814	27591886	(143214093)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	3357178
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
2277	12.7	0.0	0.9	chr6	27602220	27602534	(143203445)	C	AluSx1	SINE/Alu	(0)	312	1	3357201
595	0.0	0.0	22.2	chr6	27602568	27602675	(143203304)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357202
590	0.0	0.0	22.9	chr6	27605637	27605745	(143200234)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357208
1009	24.6	16.1	4.0	chr6	27672796	27673090	(143132889)	+	L2	LINE/L2	1073	1426	(1993)	3357342
2085	9.2	0.7	3.3	chr6	27673091	27673393	(143132586)	+	AluSx	SINE/Alu	2	296	(16)	3357343
180	18.4	0.0	2.6	chr6	27721807	27721845	(143084134)	+	L2	LINE/L2	106	143	(3276)	3357461
202	37.4	0.8	2.4	chr6	27721878	27722003	(143083976)	C	MER5A	DNA/hAT-Charlie	(28)	161	38	3357462
12	10.6	2.9	5.7	chr6	27753211	27753244	(143052735)	+	G-rich	Low_complexity	1	35	(0)	3357535
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
573	7.0	0.0	0.0	chr6	27791357	27791427	(143014552)	C	tRNA-Gln-CAA	tRNA	(4)	71	1	3357599
23	10.2	2.4	0.0	chr6	28266946	28266995	(142538984)	+	(AAAACA)n	Simple_repeat	1	51	(0)	3358357
12	19.9	2.3	4.4	chr6	28267225	28267268	(142538711)	+	G-rich	Low_complexity	1	45	(0)	3358358
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
495	14.9	4.1	1.1	chr6	28443672	28443766	(142362213)	C	MIR	SINE/MIR	(51)	211	114	3358625
666	0.0	0.0	0.0	chr6	28589379	28589450	(142216529)	+	tRNA-Gln-CAA	tRNA	1	72	(3)	3358869
585	6.9	0.0	0.0	chr6	28643445	28643516	(142162463)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3358957
57	3.6	2.1	6.1	chr6	28643792	28643887	(142162092)	+	(AT)n	Simple_repeat	1	98	(0)	3358958
659	1.4	0.0	0.0	chr6	28648207	28648280	(142157699)	C	tRNA-Thr-ACG_	tRNA	(3)	74	1	3358969
477	16.1	10.4	0.0	chr6	28659392	28659493	(142146486)	+	MLT1A	LTR/ERVL-MaLR	274	455	(2)	3358986
649	1.4	0.0	0.0	chr6	28719704	28719775	(142086204)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359087
536	12.3	0.0	0.0	chr6	28735428	28735500	(142070479)	C	tRNA-Ala-GCY_	tRNA	(2)	73	1	3359117
662	0.0	0.0	0.0	chr6	28742952	28743024	(142062955)	C	tRNA-Arg-CGG	tRNA	(3)	73	1	3359137
589	6.8	0.0	0.0	chr6	28747744	28747816	(142058163)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359146
2799	16.1	0.6	2.3	chr6	28747872	28748347	(142057632)	+	MER1A	DNA/hAT-Charlie	62	529	(0)	3359147
60739	13.7	1.0	1.0	chr6	28766731	28773949	(142032030)	C	HERVS71-int	LTR/ERV1	(41)	8937	1693	3359190
2416	6.0	1.3	0.0	chr6	28790370	28790670	(142015309)	+	AluSp	SINE/Alu	2	306	(7)	3359224
15	14.4	0.0	0.0	chr6	28790694	28790718	(142015261)	+	(A)n	Simple_repeat	1	25	(0)	3359225
661	1.4	0.0	0.0	chr6	28790722	28790794	(142015185)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	3359226
10151	11.8	4.0	0.2	chr6	28865488	28867004	(141938975)	C	LTR12C	LTR/ERV1	(0)	1579	3	3359357
668	1.3	0.0	0.0	chr6	28881388	28881462	(141924517)	+	tRNA-Arg-CGG	tRNA	1	75	(1)	3359379
221	35.9	1.9	0.0	chr6	28881562	28881664	(141924315)	C	L2c	LINE/L2	(6)	3381	3277	3359380
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
636	2.8	0.0	0.0	chr6	28941601	28941672	(141864307)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3359511
722	0.0	0.0	0.0	chr6	28943622	28943703	(141862276)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3359515
556	6.8	0.0	0.0	chr6	28944575	28944647	(141861332)	+	tRNA-Met_	tRNA	1	73	(3)	3359516
656	1.4	0.0	0.0	chr6	28951029	28951101	(141854878)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359526
661	1.4	0.0	0.0	chr6	28981672	28981744	(141824235)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	3359573
296	29.0	6.5	1.0	chr6	30155016	30155116	(140650863)	C	Charlie23a	DNA/hAT-Charlie	(0)	339	233	3361161
23	7.0	0.0	0.0	chr6	30163542	30163571	(140642408)	+	(CT)n	Simple_repeat	1	30	(0)	3361181
2548	26.1	10.3	4.0	chr6	30231042	30231933	(140574046)	+	MLT1J1-int	LTR/ERVL-MaLR	432	1376	(11)	3361303
317	28.1	15.4	5.0	chr6	30673180	30673381	(140132598)	C	L2a	LINE/L2	(3)	3423	3197	3362001
1163	22.4	10.1	0.9	chr6	31058256	31058580	(139747399)	+	Charlie13b	DNA/hAT-Charlie	155	512	(0)	3362717
3896	13.0	1.8	1.2	chr6	31203451	31204048	(139601931)	+	LTR43	LTR/ERV1	1	602	(0)	3363012
37663	1.2	0.6	1.2	chr6	31204049	31204390	(139601589)	+	LTR43-int	LTR/ERV1	1	342	(4456)	3363012
742	29.4	3.3	1.0	chr6	31463420	31463715	(139342264)	C	LTR16B2	LTR/ERVL	(110)	352	50	3363357
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
7020	10.1	14.7	0.6	chr6	31851877	31853104	(138952875)	+	LTR12C	LTR/ERV1	3	1434	(145)	3364033
570	20.9	2.5	3.2	chr6	31853112	31853269	(138952710)	+	LTR24B	LTR/ERV1	374	530	(46)	3364032
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
14	4.7	0.0	4.2	chr6	31902042	31902065	(138903914)	+	(GCG)n	Simple_repeat	1	24	(0)	3364126
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
12	17.0	9.2	4.2	chr6	33204797	33204861	(137601118)	+	(CTCTGACC)n	Simple_repeat	1	71	(0)	3365972
12	10.7	2.9	5.7	chr6	33314643	33314676	(137491303)	+	(ACAGAC)n	Simple_repeat	1	35	(0)	3366183
257	16.9	18.9	0.0	chr6	33760989	33761065	(137044914)	C	MamTip2	DNA/hAT-Tip100	(97)	208	114	3367096
2778	13.2	10.0	8.4	chr6	34386641	34386833	(136419146)	+	Tigger3b	DNA/TcMar-Tigger	2	203	(1028)	3368263
1848	16.3	2.0	0.3	chr6	34386834	34387127	(136418852)	+	AluJb	SINE/Alu	2	300	(12)	3368264
835	21.7	9.3	1.2	chr6	34527701	34527956	(136278023)	C	L1MC4	LINE/L1	(0)	8042	7764	3368608
245	26.7	5.1	0.0	chr6	34527994	34528068	(136277911)	C	L1MC4	LINE/L1	(365)	7677	7599	3368608
229	33.1	10.1	0.0	chr6	34528080	34528221	(136277758)	+	L2a	LINE/L2	3266	3423	(3)	3368609
197	27.7	5.1	5.9	chr6	35181755	35181873	(135624106)	C	L2b	LINE/L2	(20)	3355	3238	3369861
1973	14.6	5.4	6.1	chr6	35415745	35415778	(135390201)	C	MLT2D	LTR/ERVL	(0)	414	381	3370327
29	0.0	0.0	0.0	chr6	35415779	35415803	(135390176)	+	(TG)n	Simple_repeat	1	25	(0)	3370328
1973	14.6	5.4	6.1	chr6	35415804	35416099	(135389880)	C	MLT2D	LTR/ERVL	(34)	380	78	3370327
279	21.5	13.1	3.8	chr6	35472387	35472550	(135333429)	+	MIRb	SINE/MIR	4	170	(38)	3370451
416	11.6	36.6	0.8	chr6	35472563	35472684	(135333295)	+	MER53	DNA/hAT	2	192	(1)	3370452
2251	7.8	1.0	4.2	chr6	35472830	35473137	(135332842)	C	AluSc8	SINE/Alu	(13)	298	1	3370453
181	9.4	0.0	11.1	chr6	35726433	35726468	(135079511)	+	MIRb	SINE/MIR	188	219	(49)	3371012
54	0.0	0.0	0.0	chr6	35726537	35726582	(135079397)	+	(CA)n	Simple_repeat	1	46	(0)	3371013
19	25.7	4.9	1.2	chr6	35731935	35731962	(135074017)	+	(GGAGCG)n	Simple_repeat	1	83	(0)	3371022
13	31.6	0.0	0.0	chr6	35731963	35732013	(135073966)	+	G-rich	Low_complexity	1	51	(0)	3371023
624	23.9	6.3	3.6	chr6	36119355	36119601	(134686378)	+	L1ME3Cz	LINE/L1	321	574	(423)	3371825
213	28.3	13.8	0.0	chr6	36131612	36131717	(134674262)	C	MIR	SINE/MIR	(90)	172	50	3371856
642	29.8	14.1	0.0	chr6	36131751	36131975	(134674004)	C	MIR	SINE/MIR	(0)	262	1	3371857
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
1025	22.2	10.4	2.9	chr6	36610557	36610936	(134195043)	+	LTR56	LTR/ERV1	9	420	(25)	3372908
499	21.2	2.6	0.0	chr6	36666474	36666586	(134139393)	+	MER46C	DNA/TcMar-Tigger	212	327	(11)	3373051
740	20.2	4.9	0.6	chr6	36666587	36666760	(134139219)	+	L1ME4b	LINE/L1	709	890	(2)	3373049
187	35.2	4.1	0.0	chr6	36851402	36851472	(133954507)	C	MIR3	SINE/MIR	(50)	158	85	3373438
537	29.9	14.5	2.3	chr6	37089567	37089909	(133716070)	+	L3	LINE/CR1	3619	4010	(89)	3373910
1356	21.0	1.0	2.7	chr6	37191791	37192084	(133613895)	C	L1ME1	LINE/L1	(0)	6179	5891	3374195
194	21.9	2.4	0.0	chr6	37192094	37192134	(133613845)	C	L2a	LINE/L2	(19)	3407	3366	3374196
402	31.5	7.5	1.4	chr6	37192115	37192279	(133613700)	C	MIRc	SINE/MIR	(28)	180	4	3374197
7127	13.0	5.2	3.8	chr6	37221661	37222920	(133583059)	C	MER52C	LTR/ERV1	(0)	1278	1	3374268
1690	22.7	8.1	5.2	chr6	37222921	37223513	(133582466)	+	L1MEd	LINE/L1	903	1517	(5569)	3374265
895	27.6	6.0	11.6	chr6	37244688	37245134	(133560845)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	105	3374321
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
3874	18.5	1.2	2.5	chr6	37665366	37666065	(133139914)	+	MER49	LTR/ERV1	180	884	(39)	3375095
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
4672	14.2	15.0	0.4	chr6	38510127	38511180	(132294799)	C	Tigger3b	DNA/TcMar-Tigger	(12)	1219	1	3376502
273	28.6	6.2	0.0	chr6	38974885	38974975	(131831004)	C	MIRb	SINE/MIR	(35)	233	137	3377292
283	32.5	0.0	0.0	chr6	39009572	39009648	(131796331)	C	MIRb	SINE/MIR	(17)	251	175	3377336
269	30.6	0.0	1.6	chr6	39009666	39009728	(131796251)	C	MIR	SINE/MIR	(186)	76	15	3377336
282	29.9	10.7	3.8	chr6	39061240	39061448	(131744531)	+	MamRep434	DNA/TcMar-Tigger	109	333	(93)	3377403
196	33.0	0.8	7.8	chr6	40251766	40251893	(130554086)	+	MIR3	SINE/MIR	14	132	(76)	3379128
293	36.3	5.9	0.5	chr6	40996769	40996959	(129809020)	+	L2c	LINE/L2	3181	3382	(5)	3380430
193	34.9	0.0	0.0	chr6	41449899	41449961	(129356018)	C	L2b	LINE/L2	(7)	3419	3357	3381182
11	21.6	7.3	1.7	chr6	41734213	41734267	(129071712)	+	(GGCCAGC)n	Simple_repeat	1	59	(0)	3381713
370	26.9	4.0	2.5	chr6	41767261	41767382	(129038597)	+	MIR3	SINE/MIR	21	144	(64)	3381787
15	12.6	8.9	2.0	chr6	41786632	41786676	(129019303)	+	(CGG)n	Simple_repeat	1	49	(0)	3381816
705	27.1	7.1	2.8	chr6	42028634	42028849	(128777130)	+	MIRb	SINE/MIR	25	250	(18)	3382374
19	14.0	0.0	2.4	chr6	42453070	42453110	(128352869)	+	G-rich	Low_complexity	1	41	(0)	3383279
18	29.7	0.0	1.5	chr6	42782599	42782665	(128023314)	+	G-rich	Low_complexity	1	67	(0)	3384024
20	25.6	2.6	2.5	chr6	42782747	42782824	(128023155)	+	G-rich	Low_complexity	1	80	(0)	3384025
221	28.5	8.7	7.4	chr6	42928783	42928930	(127877049)	C	MIRc	SINE/MIR	(32)	236	87	3384361
29	0.0	0.0	0.0	chr6	42929620	42929646	(127876333)	+	(TGC)n	Simple_repeat	1	27	(0)	3384362
244	24.4	7.9	2.4	chr6	43013389	43013472	(127792507)	C	LTR50	LTR/ERVL	(552)	243	155	3384534
245	35.8	0.0	2.1	chr6	43054011	43054107	(127751872)	C	MIR3	SINE/MIR	(17)	191	97	3384600
1877	12.9	1.1	0.0	chr6	43088413	43088690	(127717289)	+	AluSg	SINE/Alu	1	281	(29)	3384662
47	0.0	0.0	0.0	chr6	43088691	43088733	(127717246)	+	(AAAT)n	Simple_repeat	1	43	(0)	3384663
14	39.3	1.1	1.1	chr6	43171522	43171610	(127634369)	+	(GCG)n	Simple_repeat	1	90	(0)	3384861
1749	15.2	0.7	2.1	chr6	43321780	43322061	(127483918)	C	AluJr	SINE/Alu	(11)	301	24	3385132
3296	18.7	2.2	10.0	chr6	43322062	43322276	(127483703)	+	L1MB5	LINE/L1	2874	3040	(3106)	3385129
2482	9.9	0.0	0.3	chr6	43322277	43322589	(127483390)	+	AluSz6	SINE/Alu	1	312	(0)	3385133
30	26.8	4.2	1.6	chr6	43369433	43369552	(127436427)	+	(CGC)n	Simple_repeat	1	125	(0)	3385201
16	16.5	0.0	0.0	chr6	43455623	43455649	(127350330)	+	(C)n	Simple_repeat	1	27	(0)	3385385
2184	8.7	1.3	0.7	chr6	43628082	43628391	(127177588)	+	AluSx1	SINE/Alu	1	312	(0)	3385707
669	15.7	12.2	11.2	chr6	43628392	43628462	(127177517)	+	MER5A	DNA/hAT-Charlie	112	189	(0)	3385706
41	0.0	0.0	0.0	chr6	43628471	43628505	(127177474)	+	(TG)n	Simple_repeat	1	35	(0)	3385708
47	4.2	0.0	0.0	chr6	43702713	43702761	(127103218)	+	(TG)n	Simple_repeat	1	49	(0)	3385855
19	28.1	0.0	5.6	chr6	43771865	43771954	(127034025)	+	(CCGCC)n	Simple_repeat	1	90	(0)	3385992
2794	13.7	5.0	1.4	chr6	43808804	43809415	(126996564)	C	L1MB3	LINE/L1	(406)	5777	5146	3386046
324	24.8	7.4	0.4	chr6	43809507	43809617	(126996362)	+	L2b	LINE/L2	3258	3387	(0)	3386049
735	26.8	7.8	2.1	chr6	43809746	43809985	(126995994)	+	MIR	SINE/MIR	8	262	(0)	3386050
273	31.9	4.9	1.7	chr6	43809996	43810113	(126995866)	+	L2a	LINE/L2	3304	3425	(1)	3386051
196	18.6	4.4	0.0	chr6	43901487	43901529	(126904450)	+	MIR3	SINE/MIR	40	84	(124)	3386216
346	27.6	5.6	2.9	chr6	43904772	43904909	(126901070)	+	L1ME4b	LINE/L1	707	848	(44)	3386223
55	0.0	0.0	1.9	chr6	43904910	43904963	(126901016)	+	(TTCC)n	Simple_repeat	1	54	(0)	3386224
148	1.1	3.6	3.5	chr6	43904973	43905165	(126900814)	+	(TCTT)n	Simple_repeat	1	200	(0)	3386225
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
201	28.7	9.0	3.8	chr6	44558297	44558401	(126247578)	C	MIR1_Amn	SINE/MIR	(81)	149	39	3387397
14	15.3	0.0	0.0	chr6	44558406	44558434	(126247545)	+	(CACA)n	Simple_repeat	1	29	(0)	3387398
248	31.8	0.0	1.1	chr6	45416665	45416753	(125389226)	+	MER135	DNA	40	127	(101)	3388612
566	31.4	3.8	7.7	chr6	46452305	46452604	(124353375)	C	MLT1I	LTR/ERVL-MaLR	(5)	406	119	3390212
282	29.9	4.0	1.0	chr6	46452674	46452771	(124353208)	+	MIR	SINE/MIR	152	252	(10)	3390211
975	27.6	12.6	3.9	chr6	47131194	47131941	(123674038)	+	L2a	LINE/L2	2569	3399	(27)	3391280
12	17.4	6.1	3.9	chr6	47132011	47132059	(123673920)	+	A-rich	Low_complexity	1	52	(0)	3391281
1206	16.8	22.0	2.5	chr6	47140813	47141208	(123664771)	C	LTR54B	LTR/ERV1	(2)	496	2	3391297
462	31.9	1.3	3.2	chr6	52241614	52241838	(118564141)	C	MIRc	SINE/MIR	(15)	253	29	3398198
195	31.6	3.8	3.6	chr6	52243516	52243608	(118562371)	+	MIRb	SINE/MIR	85	184	(24)	3398202
17	13.2	6.0	7.0	chr6	52362168	52362234	(118443745)	+	(GCTCGG)n	Simple_repeat	1	71	(0)	3398425
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
1761	10.6	3.0	1.2	chr6	53044133	53044389	(117761590)	+	MER1B	DNA/hAT-Charlie	1	262	(77)	3399451
871	24.5	3.9	3.0	chr6	53044395	53044629	(117761350)	+	L1MC4	LINE/L1	7737	7977	(65)	3399452
14	23.1	2.1	2.1	chr6	53348858	53348904	(117457075)	+	(GGC)n	Simple_repeat	1	48	(0)	3400038
2882	27.1	11.6	5.7	chr6	53733824	53735393	(117070586)	C	L1MEd	LINE/L1	(5360)	1726	51	3400651
210	25.0	3.5	0.0	chr6	54847469	54847524	(115958455)	+	MER5A	DNA/hAT-Charlie	132	189	(0)	3402195
217	26.3	15.9	0.0	chr6	56528562	56528656	(114277323)	C	LFSINE_Vert	SINE/tRNA	(198)	261	149	3404275
3304	12.7	3.4	0.4	chr6	56570172	56570684	(114235295)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3404316
2406	13.0	5.6	5.2	chr6	56863937	56864398	(113941581)	+	MLT2C2	LTR/ERVL	1	464	(0)	3404723
335	33.3	7.1	5.4	chr6	56864526	56864747	(113941232)	+	MIRb	SINE/MIR	42	267	(1)	3404724
2446	9.0	0.0	0.0	chr6	56904799	56905087	(113900892)	C	AluSc5	SINE/Alu	(20)	289	1	3404801
1714	27.1	5.9	3.2	chr6	63598416	63598975	(107207004)	C	LTR33C	LTR/ERVL	(29)	600	25	3410846
2280	9.4	0.7	0.7	chr6	63610706	63611002	(107194977)	+	AluSg	SINE/Alu	2	298	(12)	3410871
382	36.4	3.4	1.4	chr6	72953053	72953197	(97852782)	C	L2b	LINE/L2	(0)	3375	3228	3422563
415	28.0	14.1	1.8	chr6	73513209	73513481	(97292498)	+	L2a	LINE/L2	3111	3422	(4)	3423635
868	22.4	4.6	0.9	chr6	73513564	73513793	(97292186)	+	L1M5	LINE/L1	5552	5790	(389)	3423636
26	20.2	0.0	0.0	chr6	75284721	75284777	(95521202)	+	(CGCCGC)n	Simple_repeat	1	57	(0)	3425987
381	27.1	0.3	2.8	chr6	75349036	75349142	(95456837)	+	MIR3	SINE/MIR	80	180	(28)	3426078
12	14.8	4.9	4.7	chr6	75413475	75413515	(95392464)	+	(TGTT)n	Simple_repeat	1	43	(0)	3426175
1106	17.6	1.0	1.0	chr6	79070639	79070844	(91735135)	C	MER2	DNA/TcMar-Tigger	(0)	345	140	3430757
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
3495	27.6	9.3	4.4	chr6	79117234	79119818	(91686161)	+	L1ME1	LINE/L1	99	2953	(4069)	3430827
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
320	36.0	9.9	2.6	chr6	82072157	82072538	(88733441)	+	AmnSINE1	SINE/5S-Deu-L2	130	542	(33)	3434600
2157	25.6	9.2	2.5	chr6	82323189	82323960	(88482019)	C	HAL1	LINE/L1	(290)	2217	1389	3435002
527	29.8	14.7	0.5	chr6	82323994	82324209	(88481770)	+	MIR	SINE/MIR	9	260	(2)	3435004
255	36.5	2.9	8.6	chr6	82370347	82370532	(88435447)	C	MIR3	SINE/MIR	(21)	187	13	3435076
268	32.6	15.0	1.1	chr6	82877094	82877270	(87928709)	C	L1MEd	LINE/L1	(6264)	822	617	3435733
279	33.3	0.0	0.0	chr6	82877278	82877355	(87928624)	+	MERX	DNA/TcMar-Tigger	310	387	(369)	3435734
266	33.1	3.5	6.8	chr6	83067337	83067482	(87738497)	+	MIR3	SINE/MIR	44	184	(24)	3436014
2334	29.3	5.6	1.7	chr6	84575178	84576675	(86229304)	+	ERVL-E-int	LTR/ERVL	1177	2735	(2932)	3438012
42988	6.0	0.7	0.3	chr6	84712782	84718373	(86087606)	C	HERV17-int	LTR/ERV1	(1479)	7147	1535	3438186
6595	8.7	5.3	0.7	chr6	84718364	84719411	(86086568)	C	HERVIP10FH-int	LTR/ERV1	(3165)	1937	839	3438187
20	22.7	0.0	1.9	chr6	84763995	84764047	(86041932)	+	(CGC)n	Simple_repeat	1	53	(0)	3438230
12	12.2	3.7	0.0	chr6	84774005	84774031	(86031948)	+	(TGCG)n	Simple_repeat	1	28	(0)	3438237
194	33.3	0.0	1.7	chr6	84777850	84777907	(86028072)	+	L2c	LINE/L2	3255	3311	(76)	3438242
260	29.4	10.3	3.8	chr6	84777994	84778175	(86027804)	+	MIR3	SINE/MIR	2	201	(7)	3438243
1783	17.0	4.9	0.9	chr6	85498588	85498919	(85307060)	C	MLT1A0	LTR/ERVL-MaLR	(16)	349	4	3439134
1604	19.3	9.0	6.2	chr6	85499095	85499546	(85306433)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	2	3439135
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
229	33.5	4.9	14.5	chr6	87915196	87915422	(82890557)	+	MIR3	SINE/MIR	3	206	(2)	3442435
615	17.9	0.9	0.0	chr6	88987224	88987329	(81818650)	+	L2a	LINE/L2	3320	3426	(0)	3443905
636	28.8	6.3	0.9	chr6	88987343	88987566	(81818413)	C	MIRb	SINE/MIR	(6)	262	26	3443906
297	31.9	8.2	9.1	chr6	89971369	89971564	(80834415)	C	L2b	LINE/L2	(2)	3373	3190	3445727
2347	11.2	1.6	3.8	chr6	89971565	89971936	(80834043)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3445728
42	0.0	0.0	0.0	chr6	90609581	90609616	(80196363)	+	(TG)n	Simple_repeat	1	36	(0)	3446638
355	33.1	4.4	0.0	chr6	90731165	90731294	(80074685)	C	L2b	LINE/L2	(0)	3375	3240	3446795
1187	17.8	3.4	0.0	chr6	90731303	90731499	(80074480)	C	MER20	DNA/hAT-Charlie	(15)	204	1	3446796
467	32.6	4.8	1.6	chr6	93040686	93040904	(77765075)	+	MIRb	SINE/MIR	16	247	(21)	3449594
538	23.6	13.5	3.1	chr6	95576555	95576812	(75229167)	+	L1ME3D	LINE/L1	5943	6231	(11)	3452632
441	30.4	6.8	3.0	chr6	95576833	95577168	(75228811)	+	Charlie15b	DNA/hAT-Charlie	712	1061	(0)	3452634
320	30.0	12.3	6.8	chr6	96838561	96838721	(73967258)	+	MER91A	DNA/hAT-Tip100	3	173	(23)	3454213
679	20.4	3.6	3.0	chr6	96841123	96841289	(73964690)	C	MER5B	DNA/hAT-Charlie	(6)	172	5	3454217
250	31.2	2.1	3.1	chr6	96841383	96841478	(73964501)	C	MamRTE1	LINE/RTE-BovB	(782)	3030	2936	3454218
41	0.0	0.0	0.0	chr6	96924802	96924836	(73881143)	+	(CA)n	Simple_repeat	1	35	(0)	3454325
259	22.9	6.3	7.8	chr6	96939150	96939277	(73866702)	+	Charlie26a	DNA/hAT-Charlie	54	179	(146)	3454342
325	36.1	5.0	9.3	chr6	96939283	96939615	(73866364)	C	L2b	LINE/L2	(6)	3369	3052	3454343
279	26.0	10.7	0.0	chr6	97963305	97963404	(72842575)	C	L1M5	LINE/L1	(547)	5647	5536	3455704
209	21.1	3.4	1.7	chr6	99521599	99521656	(71284323)	C	MIR3	SINE/MIR	(60)	148	90	3457776
1062	26.0	10.0	3.0	chr6	100302053	100302662	(70503317)	C	L1ME3G	LINE/L1	(329)	595	1	3458851
342	30.3	2.7	0.9	chr6	107386548	107386657	(63419322)	C	MIR3	SINE/MIR	(3)	205	94	3468776
578	28.7	7.3	0.7	chr6	107560578	107560786	(63245193)	C	MIRb	SINE/MIR	(10)	258	27	3469052
16517	11.2	1.9	2.1	chr6	107651284	107653071	(63152908)	+	Tigger1	DNA/TcMar-Tigger	613	2413	(5)	3469166
14	20.8	4.5	0.0	chr6	107667110	107667153	(63138826)	+	(TCTCTG)n	Simple_repeat	1	46	(0)	3469182
2654	5.9	0.0	0.0	chr6	107726252	107726558	(63079421)	+	AluY	SINE/Alu	1	307	(4)	3469280
11050	17.9	3.9	2.1	chr6	107726559	107727427	(63078552)	+	L1MB8	LINE/L1	5288	6172	(6)	3469276
1339	6.4	0.0	0.0	chr6	107958654	107958810	(62847169)	+	AluSg	SINE/Alu	1	157	(153)	3469655
729	27.6	12.7	3.6	chr6	109010772	109011221	(61794758)	C	L4_A_Mam	LINE/RTE-X	(952)	4038	3542	3471497
14	19.5	0.0	2.7	chr6	109441043	109441079	(61364900)	+	(CGC)n	Simple_repeat	1	37	(0)	3472169
181	24.6	0.0	3.4	chr6	109691574	109691632	(61114347)	+	OldhAT1	DNA/hAT-Ac	1898	1954	(894)	3472534
281	34.7	4.4	2.0	chr6	110492862	110493061	(60312918)	+	L2b	LINE/L2	2931	3135	(240)	3473736
296	22.8	3.2	0.0	chr6	110543150	110543241	(60262738)	C	LTR33	LTR/ERVL	(349)	166	72	3473820
223	30.4	2.5	1.2	chr6	110543433	110543512	(60262467)	+	L2c	LINE/L2	3304	3384	(3)	3473821
12	9.8	0.0	0.0	chr6	110543515	110543536	(60262443)	+	(AGAA)n	Simple_repeat	1	22	(0)	3473822
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
852	29.4	14.5	0.0	chr6	111478894	111479199	(59326780)	+	Tigger19b	DNA/TcMar-Tigger	92	449	(101)	3475660
19	23.4	0.0	0.0	chr6	111482928	111482977	(59323002)	+	(CGGCAG)n	Simple_repeat	1	50	(0)	3475665
403	31.1	12.4	0.7	chr6	111554741	111554889	(59251090)	+	MIR3	SINE/MIR	29	197	(11)	3475821
288	25.5	8.4	5.8	chr6	111604944	111605047	(59200932)	C	MIRc	SINE/MIR	(119)	149	43	3475906
242	33.5	6.3	0.6	chr6	111976010	111976189	(58829790)	+	L2c	LINE/L2	1623	1813	(1606)	3476470
383	29.6	7.4	2.8	chr6	112236093	112236273	(58569706)	+	MIR3	SINE/MIR	16	205	(3)	3476813
337	35.2	7.5	0.6	chr6	112236283	112236442	(58569537)	+	MIRc	SINE/MIR	65	236	(32)	3476814
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
2288	4.4	0.4	2.5	chr6	116277661	116277934	(54528045)	+	AluSg	SINE/Alu	39	306	(4)	3482343
23566	7.9	0.8	0.6	chr6	116500870	116507021	(54298958)	+	L1PA6	LINE/L1	5	6151	(3)	3482647
32	26.9	0.0	3.7	chr6	116616035	116616141	(54189838)	+	(TCCC)n	Simple_repeat	1	107	(0)	3482821
17	8.2	3.9	0.0	chr6	116616124	116616149	(54189830)	+	(CA)n	Simple_repeat	1	27	(0)	3482822
455	36.4	7.3	5.2	chr6	116945999	116946653	(53859326)	C	L2	LINE/L2	(1035)	2384	1715	3483277
2526	25.4	2.1	1.6	chr6	116963881	116964493	(53841486)	C	MLT1E2	LTR/ERVL-MaLR	(11)	616	1	3483295
39	4.6	0.0	0.0	chr6	117907178	117907222	(52898757)	+	(GCC)n	Simple_repeat	1	45	(0)	3484466
205	31.4	1.4	1.4	chr6	118318886	118318956	(52487023)	+	L2a	LINE/L2	3355	3425	(1)	3485027
648	30.3	8.1	3.8	chr6	118697605	118697964	(52108015)	C	ERVL-E-int	LTR/ERVL	(2092)	3622	3159	3485529
1668	31.4	9.2	5.1	chr6	118698001	118699042	(52106937)	C	ERVL-E-int	LTR/ERVL	(2566)	3101	2013	3485529
186	41.3	2.1	0.0	chr6	118770548	118770639	(52035340)	+	MIRb	SINE/MIR	16	109	(159)	3485659
699	7.9	1.1	0.0	chr6	118770657	118770745	(52035234)	C	Tigger3b	DNA/TcMar-Tigger	(33)	1198	1109	3485660
1139	25.2	5.3	8.0	chr6	118770756	118771220	(52034759)	C	MER101	LTR/ERV1	(12)	462	11	3485661
927	17.5	10.6	1.7	chr6	119066168	119066520	(51739459)	C	MLT1D	LTR/ERVL-MaLR	(16)	489	9	3486068
862	19.4	2.2	1.7	chr6	119335946	119336065	(51469914)	+	MER5A	DNA/hAT-Charlie	2	122	(67)	3486478
1884	20.8	6.8	1.6	chr6	123306420	123306854	(47499125)	+	MER65C	LTR/ERV1	1	459	(2)	3491519
222	36.8	3.2	4.7	chr6	123841457	123841647	(46964332)	+	MamRTE1	LINE/RTE-BovB	1830	2017	(1795)	3492237
384	38.7	5.5	0.0	chr6	123841729	123841883	(46964096)	+	MamRTE1	LINE/RTE-BovB	2160	2323	(1489)	3492237
261	34.6	3.7	1.5	chr6	124076780	124076911	(46729068)	+	MIR	SINE/MIR	18	152	(110)	3492570
266	22.8	16.4	0.0	chr6	124125799	124125890	(46680089)	+	L2	LINE/L2	402	511	(2908)	3492621
335	28.2	13.2	3.7	chr6	125014274	125014409	(45791570)	C	MIR	SINE/MIR	(3)	259	109	3493719
425	34.2	6.5	1.9	chr6	125014441	125014765	(45791214)	+	L4_C_Mam	LINE/RTE-X	3678	4018	(1120)	3493720
1668	23.2	8.1	3.3	chr6	125512003	125512425	(45293554)	+	LTR16A1	LTR/ERVL	12	456	(0)	3494436
626	0.0	0.0	0.0	chr6	125780247	125780318	(45025661)	C	tRNA-Glu-GAG_	tRNA	(3)	72	1	3494811
16	0.0	0.0	0.0	chr6	125846362	125846379	(44959600)	+	(T)n	Simple_repeat	1	18	(0)	3494912
202	35.4	9.8	3.9	chr6	125846426	125846578	(44959401)	C	MIR3	SINE/MIR	(15)	193	31	3494913
338	26.1	0.0	0.0	chr6	125945504	125945572	(44860407)	+	MIR	SINE/MIR	41	109	(153)	3495062
2670	25.5	12.1	1.9	chr6	125945614	125946547	(44859432)	C	L2	LINE/L2	(870)	2549	1508	3495063
13	13.2	6.7	4.2	chr6	125956943	125956987	(44848992)	+	(GAGGCGC)n	Simple_repeat	1	48	(0)	3495078
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
290	31.2	8.9	0.9	chr6	128197818	128197930	(42608049)	+	MLT1G	LTR/ERVL-MaLR	22	144	(447)	3497839
694	26.7	13.3	2.2	chr6	128197983	128198208	(42607771)	+	MLT1G	LTR/ERVL-MaLR	336	590	(1)	3497839
219	31.8	1.8	7.0	chr6	130958516	130958630	(39847349)	C	L2b	LINE/L2	(214)	3161	3053	3501606
284	40.4	11.3	3.1	chr6	130958711	130959551	(39846428)	C	L2b	LINE/L2	(422)	2997	2079	3501606
378	27.2	11.4	5.0	chr6	131816028	131816329	(38989650)	+	Tigger16a	DNA/TcMar-Tigger	633	956	(1)	3502947
1252	21.1	10.0	3.6	chr6	133041104	133041467	(37764512)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3504716
37	0.0	2.9	0.0	chr6	133243090	133243124	(37562855)	+	(GT)n	Simple_repeat	1	36	(0)	3504978
18	14.7	0.0	0.0	chr6	134105928	134105957	(36700022)	+	(GA)n	Simple_repeat	1	30	(0)	3506183
1135	8.0	0.0	4.3	chr6	134109502	134109663	(36696316)	C	AluSx	SINE/Alu	(13)	299	145	3506192
1604	13.6	5.7	0.0	chr6	134109685	134109949	(36696030)	C	Tigger3c	DNA/TcMar-Tigger	(0)	602	322	3506193
430	33.1	2.5	4.5	chr6	134529960	134530215	(36275764)	+	MIRc	SINE/MIR	11	253	(15)	3507076
24	22.4	3.4	0.0	chr6	134707265	134707323	(36098656)	+	(CT)n	Simple_repeat	1	61	(0)	3507340
302	30.2	3.4	0.0	chr6	135055112	135055197	(35750782)	+	L2c	LINE/L2	3286	3374	(13)	3507874
535	20.5	8.0	5.8	chr6	135183845	135184015	(35621964)	C	MIR3	SINE/MIR	(19)	189	15	3508092
1290	17.0	0.4	5.8	chr6	136088563	136088856	(34717123)	+	L1MB8	LINE/L1	5892	6169	(9)	3509342
1645	26.3	15.6	3.3	chr6	137014216	137015186	(33790793)	C	HAL1b	LINE/L1	(0)	2421	1310	3510849
2572	20.2	9.1	0.7	chr6	137665033	137665644	(33140335)	C	LTR65	LTR/ERV1	(0)	669	1	3511791
23068	10.4	2.0	1.5	chr6	137837314	137842804	(32963175)	C	L1PB1	LINE/L1	(0)	6867	1341	3512068
294	23.2	14.7	1.0	chr6	137853843	137853942	(32952037)	C	MIR	SINE/MIR	(13)	249	134	3512085
755	32.4	5.7	7.1	chr6	137853957	137854347	(32951632)	+	L1MC5a	LINE/L1	4444	4838	(1308)	3512086
185	23.9	7.8	4.0	chr6	138037049	138037122	(32768857)	+	L2	LINE/L2	2861	2937	(482)	3512381
56	0.0	0.0	0.0	chr6	138402894	138402943	(32403036)	+	(TTAT)n	Simple_repeat	1	50	(0)	3512915
883	14.8	4.3	1.3	chr6	138402945	138403101	(32402878)	C	AluJb	SINE/Alu	(31)	281	120	3512916
215	25.4	13.0	0.0	chr6	138816226	138816292	(31989687)	+	AmnSINE1	SINE/5S-Deu-L2	244	320	(255)	3513606
391	24.1	26.0	0.0	chr6	139125341	139125531	(31680448)	C	MIR	SINE/MIR	(0)	262	5	3514164
31	0.0	0.0	0.0	chr6	139152419	139152445	(31653534)	+	(TG)n	Simple_repeat	1	27	(0)	3514207
17	7.0	0.0	5.9	chr6	142146996	142147029	(28658950)	+	(AACAA)n	Simple_repeat	1	34	(0)	3518107
463	18.3	0.0	2.4	chr6	142323482	142323551	(28482428)	+	Tigger3c	DNA/TcMar-Tigger	1	70	(532)	3518362
1937	15.6	6.0	0.0	chr6	142323552	142323877	(28482102)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	1	3518363
196	30.0	2.8	1.4	chr6	142357949	142358019	(28447960)	C	MIRb	SINE/MIR	(6)	262	191	3518406
215	31.7	5.6	7.3	chr6	142376914	142377022	(28428957)	+	MamRTE1	LINE/RTE-BovB	3701	3807	(5)	3518436
2173	14.9	2.9	4.5	chr6	142377118	142377539	(28428440)	C	MER61C	LTR/ERV1	(0)	428	14	3518437
262	33.9	3.2	1.9	chr6	142383394	142383526	(28422453)	C	MIR3	SINE/MIR	(57)	151	10	3518446
13	21.6	0.0	0.0	chr6	142944530	142944561	(27861418)	+	GA-rich	Low_complexity	1	32	(0)	3519175
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
493	29.2	1.4	0.1	chr6	144144094	144144241	(26661738)	C	L2a	LINE/L2	(0)	3426	3228	3520929
449	33.3	0.7	2.0	chr6	144266496	144266642	(26539337)	C	MIR3	SINE/MIR	(6)	202	58	3521135
703	32.2	13.2	0.4	chr6	144434372	144434826	(26371153)	C	L2	LINE/L2	(781)	2638	2117	3521427
340	27.1	3.0	0.0	chr6	145735976	145736071	(25069908)	+	MIR3	SINE/MIR	89	187	(21)	3523127
417	31.3	6.8	4.5	chr6	147177390	147177546	(23628433)	C	MIRc	SINE/MIR	(68)	200	40	3525050
290	31.2	2.6	4.3	chr6	149233487	149233603	(21572376)	+	L2c	LINE/L2	3267	3381	(6)	3528095
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
65	0.0	0.0	0.0	chr6	149847825	149847879	(20958100)	+	(AC)n	Simple_repeat	1	55	(0)	3529293
13	9.7	5.7	2.7	chr6	149864264	149864298	(20941681)	+	(GCCCTGC)n	Simple_repeat	1	37	(0)	3529318
426	22.9	4.4	0.8	chr6	149865261	149865392	(20940587)	C	L1MEc	LINE/L1	(5494)	906	770	3529321
201	30.4	10.7	1.1	chr6	149963663	149963755	(20842224)	+	MIR1_Amn	SINE/MIR	84	186	(44)	3529448
415	31.6	3.3	10.5	chr6	150078866	150078998	(20726981)	C	L1MEg	LINE/L1	(5422)	662	539	3529624
1871	17.9	0.0	0.3	chr6	150078999	150079295	(20726684)	+	AluJb	SINE/Alu	1	296	(16)	3529628
804	28.8	3.8	0.4	chr6	150134600	150134850	(20671129)	+	Charlie10	DNA/hAT-Charlie	1	260	(2562)	3529733
15	7.8	0.0	6.5	chr6	150141606	150141638	(20664341)	+	(AAC)n	Simple_repeat	1	30	(0)	3529744
297	31.4	4.9	4.4	chr6	150719159	150719341	(20086638)	+	Tigger12	DNA/TcMar-Tigger	149	332	(2143)	3530635
2594	5.3	0.0	0.0	chr6	150813024	150813324	(19992655)	+	AluY	SINE/Alu	1	301	(10)	3530797
543	33.3	4.4	0.0	chr6	152095020	152095235	(18710744)	+	L2	LINE/L2	2654	2879	(540)	3533039
235	27.0	5.2	8.6	chr6	152095367	152095543	(18710436)	C	MLT1K	LTR/ERVL-MaLR	(98)	451	225	3533034
199	22.7	10.8	0.0	chr6	152572531	152572596	(18233383)	C	MIRc	SINE/MIR	(124)	144	71	3533706
785	25.4	6.7	3.5	chr6	152575634	152575865	(18230114)	+	MIRb	SINE/MIR	29	268	(0)	3533710
22311	7.8	1.0	0.4	chr6	154172170	154178299	(16627680)	+	L1PA6	LINE/L1	5	6152	(2)	3535901
385	28.6	7.2	2.1	chr6	154852531	154852681	(15953298)	+	MIR	SINE/MIR	93	266	(2)	3537158
303	30.2	10.8	2.5	chr6	154852968	154853086	(15952893)	+	L2c	LINE/L2	3258	3387	(0)	3537155
765	31.8	9.3	0.3	chr6	155016007	155016318	(15789661)	+	L1ME3G	LINE/L1	199	541	(383)	3537479
382	23.8	11.8	7.5	chr6	155314942	155315144	(15490835)	+	MIRb	SINE/MIR	53	268	(0)	3537959
405	26.7	3.7	0.0	chr6	156557394	156557524	(14248455)	+	L2b	LINE/L2	3233	3368	(7)	3539625
239	27.6	0.0	0.0	chr6	156622397	156622454	(14183525)	C	L2c	LINE/L2	(64)	3323	3266	3539727
1933	12.8	4.1	0.7	chr6	156800625	156800906	(14005073)	+	AluJo	SINE/Alu	1	292	(20)	3540026
627	23.1	1.4	10.6	chr6	156800907	156801058	(14004921)	C	MER3	DNA/hAT-Charlie	(71)	138	2	3540024
2305	8.9	0.3	0.7	chr6	156801197	156801498	(14004481)	C	AluSg7	SINE/Alu	(8)	301	1	3540027
1566	26.3	2.9	0.4	chr6	156910848	156911344	(13894635)	C	MER20B	DNA/hAT-Charlie	(49)	734	225	3540184
16	31.7	0.0	0.0	chr6	156969852	156969909	(13836070)	+	(TTTT)n	Simple_repeat	1	58	(0)	3540250
228	27.0	5.3	3.3	chr6	156980544	156980635	(13825344)	C	L2c	LINE/L2	(37)	3350	3257	3540266
472	26.1	7.5	2.1	chr6	157041593	157041759	(13764220)	C	MIR	SINE/MIR	(71)	191	16	3540346
676	17.4	1.1	14.0	chr6	157194830	157195036	(13610943)	+	AluJr4	SINE/Alu	129	308	(4)	3540537
516	24.8	8.5	0.0	chr6	157660035	157660163	(13145816)	C	MIRb	SINE/MIR	(59)	209	69	3541253
888	13.6	0.0	0.0	chr6	158235523	158235647	(12570332)	C	FLAM_C	SINE/Alu	(18)	125	1	3542203
2233	13.5	2.2	7.4	chr6	158235648	158235711	(12570268)	C	L1MB3	LINE/L1	(357)	5826	5767	3542201
18	13.4	4.9	0.0	chr6	158235852	158235892	(12570087)	+	(ATTAA)n	Simple_repeat	1	43	(0)	3542204
292	30.5	8.7	1.9	chr6	158286997	158287103	(12518876)	C	L2c	LINE/L2	(11)	3376	3262	3542296
4393	5.1	5.0	1.7	chr6	158405277	158405852	(12400127)	C	LTR14B	LTR/ERVK	(0)	608	13	3542481
303	27.0	8.6	5.7	chr6	158793592	158793748	(12012231)	C	MER20B	DNA/hAT-Charlie	(592)	191	30	3543126
513	27.5	8.7	1.1	chr6	159000625	159000804	(11805175)	+	MIR	SINE/MIR	44	238	(24)	3543513
268	36.8	14.3	1.9	chr6	159253062	159253548	(11552431)	+	MamRTE1	LINE/RTE-BovB	811	1368	(2444)	3543852
194	38.3	13.9	1.6	chr6	159759973	159760155	(11045824)	C	L2b	LINE/L2	(50)	3325	3117	3544560
488	33.5	4.3	2.7	chr6	163746267	163746431	(7059548)	+	MIRb	SINE/MIR	10	188	(80)	3549870
2148	14.1	0.3	1.0	chr6	163746432	163746744	(7059235)	C	AluJr	SINE/Alu	(0)	312	2	3549871
322	32.7	3.3	7.2	chr6	165674100	165674320	(5131659)	+	MIR	SINE/MIR	32	243	(19)	3552237
1013	32.2	3.7	1.9	chr6	165894202	165894727	(4911252)	+	L3	LINE/CR1	3108	3643	(456)	3552512
26	13.4	0.0	0.0	chr6	165987956	165987996	(4817983)	+	(TG)n	Simple_repeat	1	41	(0)	3552638
18	16.6	0.0	7.3	chr6	166627312	166627366	(4178613)	+	(CCCGC)n	Simple_repeat	1	55	(0)	3553462
1953	13.8	0.3	1.9	chr7	2558582	2558892	(156787081)	C	AluJr	SINE/Alu	(6)	306	1	3561637
479	32.5	0.7	0.0	chr7	2758278	2758428	(156587545)	C	Charlie1	DNA/hAT-Charlie	(2547)	234	83	3561947
345	21.2	1.7	0.9	chr7	2758469	2758621	(156587352)	+	MLT1E1	LTR/ERVL-MaLR	52	255	(399)	3561948
398	28.1	13.1	3.8	chr7	3373668	3374100	(155971873)	+	L1ME4a	LINE/L1	4399	4894	(1506)	3563197
561	19.8	0.0	0.0	chr7	4695424	4695519	(154650454)	+	MER3	DNA/hAT-Charlie	14	109	(100)	3565407
2077	12.0	0.3	4.7	chr7	4695523	4695655	(154650318)	+	AluSx3	SINE/Alu	1	131	(180)	3565408
2081	12.0	0.0	0.7	chr7	5822477	5822790	(153523183)	C	AluY	SINE/Alu	(0)	311	1	3567915
22734	9.2	0.8	1.2	chr7	12839562	12845708	(146500265)	+	L1PA7	LINE/L1	54	6150	(4)	3577932
33	0.0	0.0	0.0	chr7	13920442	13920469	(145425504)	+	(GT)n	Simple_repeat	1	28	(0)	3579355
187	27.5	2.8	2.8	chr7	16420560	16420630	(142925343)	+	L2b	LINE/L2	3287	3357	(18)	3582434
30	25.7	0.0	0.0	chr7	17132832	17132901	(142213072)	+	(CA)n	Simple_repeat	1	70	(0)	3583484
1996	27.2	5.2	1.0	chr7	17288763	17289356	(142056617)	C	LTR67B	LTR/ERVL	(0)	620	1	3583694
391	29.0	2.9	4.2	chr7	17289357	17289481	(142056492)	C	MIRc	SINE/MIR	(137)	131	9	3583693
478	29.7	7.8	0.6	chr7	19304346	19304511	(140041462)	C	MIRb	SINE/MIR	(44)	224	46	3586371
1761	24.1	5.7	4.7	chr7	22548043	22548730	(136797243)	C	LTR106_Mam	LTR	(4)	704	9	3590827
23	3.7	0.0	0.0	chr7	25549742	25549769	(133796204)	+	(TC)n	Simple_repeat	1	28	(0)	3595601
33	3.1	0.0	0.0	chr7	25549770	25549802	(133796171)	+	(TG)n	Simple_repeat	1	33	(0)	3595602
1199	26.9	14.7	4.5	chr7	26075786	26076177	(133269796)	C	L1MC5	LINE/L1	(276)	9028	8561	3596369
55	0.0	0.0	0.0	chr7	26377019	26377065	(132968908)	+	(TG)n	Simple_repeat	1	47	(0)	3596951
187	22.5	2.7	11.2	chr7	27098923	27099002	(132246971)	+	L3	LINE/CR1	2707	2779	(1320)	3598017
12	15.8	2.6	5.0	chr7	27130047	27130085	(132215888)	+	(CCCGAC)n	Simple_repeat	1	40	(0)	3598045
2205	13.6	7.0	1.7	chr7	27442161	27442564	(131903409)	C	L1MB8	LINE/L1	(0)	6178	5752	3598509
2435	17.4	7.5	3.4	chr7	27442579	27443077	(131902896)	+	MER39	LTR/ERV1	187	707	(0)	3598510
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
12	22.7	2.3	2.3	chr7	28686205	28686247	(130659726)	+	(TTTTA)n	Simple_repeat	1	44	(0)	3600425
24	32.4	2.8	0.9	chr7	28686276	28686383	(130659590)	+	(TCC)n	Simple_repeat	1	111	(0)	3600426
942	16.9	0.6	0.6	chr7	30478205	30478371	(128867602)	C	MER5B	DNA/hAT-Charlie	(11)	167	1	3603186
19	6.3	5.9	0.0	chr7	35035940	35035973	(124310000)	+	(AAAC)n	Simple_repeat	1	36	(0)	3610091
220	34.2	7.3	0.9	chr7	37549566	37549680	(121796293)	+	L2c	LINE/L2	3264	3386	(1)	3613933
263	30.3	2.6	0.0	chr7	37549699	37549774	(121796199)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	516	3613939
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
261	29.8	10.6	1.4	chr7	41243123	41243394	(118102579)	+	L1ME3Cz	LINE/L1	5276	5437	(687)	3619545
1939	21.7	5.3	1.3	chr7	42240347	42240794	(117105179)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3620937
257	30.7	9.1	1.7	chr7	43768416	43768584	(115577389)	+	MIRc	SINE/MIR	29	216	(52)	3623151
232	31.4	11.6	2.1	chr7	43926843	43926982	(115418991)	C	L2c	LINE/L2	(202)	3185	3031	3623463
226	25.9	15.9	3.4	chr7	44486897	44487044	(114858929)	C	MIR3	SINE/MIR	(2)	206	37	3624267
188	28.8	19.3	0.9	chr7	44885920	44886147	(114459826)	C	L2b	LINE/L2	(180)	3195	2916	3625086
184	27.5	2.8	2.8	chr7	51606761	51606831	(107739142)	C	MIR	SINE/MIR	(115)	147	77	3633883
265	25.2	6.2	16.1	chr7	51606842	51607021	(107738952)	C	MIR	SINE/MIR	(29)	233	73	3633884
2385	4.6	4.5	2.3	chr7	66114385	66114687	(93231286)	+	AluSc8	SINE/Alu	1	310	(1)	3649274
1673	16.6	0.3	5.4	chr7	66184467	66184652	(93161321)	+	AluJr	SINE/Alu	128	298	(14)	3649458
887	31.5	3.2	4.3	chr7	66184741	66185088	(93160885)	C	LTR78	LTR/ERV1	(395)	909	566	3649460
263	28.6	6.7	1.2	chr7	66930483	66930567	(92415406)	C	L2a	LINE/L2	(1337)	2082	1993	3651127
337	21.1	11.4	1.8	chr7	69596755	69596865	(89749108)	+	L2a	LINE/L2	3299	3421	(5)	3657058
198	21.2	9.6	1.5	chr7	69596989	69597055	(89748918)	+	MIRb	SINE/MIR	193	265	(3)	3657059
233	22.5	0.0	13.6	chr7	69632265	69632367	(89713606)	+	L2c	LINE/L2	3295	3383	(4)	3657120
376	25.6	2.9	3.9	chr7	69641043	69641220	(89704753)	C	L2c	LINE/L2	(38)	3388	3209	3657137
225	33.0	20.9	2.3	chr7	69641291	69641507	(89704466)	+	L2c	LINE/L2	3077	3344	(43)	3657138
185	17.4	11.5	2.1	chr7	70098346	70098392	(89247581)	C	L3	LINE/CR1	(2343)	1756	1705	3657850
199	29.5	14.3	0.0	chr7	70710486	70710563	(88635410)	C	MamRTE1	LINE/RTE-BovB	(1584)	2228	2138	3658718
698	21.9	4.4	0.8	chr7	73564442	73564633	(85781340)	C	MLT1J1	LTR/ERVL-MaLR	(261)	187	2	3664924
2364	9.8	0.3	0.0	chr7	74079564	74079869	(85266104)	+	AluSx1	SINE/Alu	1	307	(5)	3666135
1811	14.6	2.1	0.0	chr7	74197788	74198068	(85147905)	C	AluSx1	SINE/Alu	(25)	287	1	3666444
106	10.3	4.7	0.0	chr7	74270225	74270393	(85075580)	+	(CTCCC)n	Simple_repeat	1	178	(0)	3666635
200	34.7	8.2	6.2	chr7	75734782	75734959	(83611014)	+	L2c	LINE/L2	3040	3221	(166)	3670380
494	29.3	10.3	2.7	chr7	75735032	75735266	(83610707)	C	MIRc	SINE/MIR	(1)	267	7	3670381
316	24.4	4.7	1.2	chr7	75879997	75880079	(83465894)	C	MIR	SINE/MIR	(59)	203	118	3670808
413	30.1	12.5	5.8	chr7	75880178	75880438	(83465535)	C	Tigger19b	DNA/TcMar-Tigger	(60)	490	210	3670809
375	30.1	13.4	2.9	chr7	76291465	76291704	(83054269)	+	L2c	LINE/L2	3115	3383	(4)	3671796
193	27.3	4.7	17.3	chr7	76291604	76291776	(83054197)	+	X9_LINE	LINE/L1	779	928	(8)	3671797
1801	12.9	0.0	6.9	chr7	76314612	76314914	(83031059)	+	AluJo	SINE/Alu	1	282	(30)	3671851
372	30.1	8.0	3.2	chr7	76364817	76365005	(82980968)	+	MIR3	SINE/MIR	10	208	(0)	3671956
28	13.2	0.0	0.0	chr7	76365038	76365080	(82980893)	+	(T)n	Simple_repeat	1	43	(0)	3671957
2458	9.1	0.0	1.9	chr7	76365082	76365400	(82980573)	C	AluSp	SINE/Alu	(0)	313	1	3671958
1525	13.2	8.1	0.4	chr7	77834336	77834608	(81511365)	C	LTR23	LTR/ERV1	(141)	296	1	3674563
460	26.3	1.7	2.6	chr7	77834663	77834779	(81511194)	C	MIR3	SINE/MIR	(77)	131	16	3674565
200	28.9	5.7	4.6	chr7	80812323	80812409	(78533564)	C	MIRc	SINE/MIR	(162)	106	19	3678656
360	27.3	8.5	11.6	chr7	82156219	82156425	(77189548)	+	Tigger19b	DNA/TcMar-Tigger	53	252	(298)	3680488
4136	7.9	3.8	0.5	chr7	83263382	83263966	(76082007)	+	LTR14B	LTR/ERVK	4	608	(0)	3682034
299	29.5	7.2	0.0	chr7	87459633	87459761	(71886212)	C	L1ME4b	LINE/L1	(45)	847	709	3687227
300	31.9	1.6	4.0	chr7	90816811	90816934	(68529039)	C	MIR3	SINE/MIR	(1)	207	87	3691656
220	34.1	2.2	1.0	chr7	93016966	93017063	(66328910)	C	MIRc	SINE/MIR	(102)	166	65	3694733
238	26.9	6.0	2.5	chr7	93738079	93738158	(65607815)	+	MIRc	SINE/MIR	165	247	(21)	3695662
852	26.8	6.7	5.6	chr7	96721268	96721694	(62624279)	C	L2a	LINE/L2	(0)	3426	2995	3699758
1314	27.5	12.8	5.6	chr7	97847711	97848245	(61497728)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	1	3701373
258	27.7	19.8	5.1	chr7	97848246	97848305	(61497668)	+	MIR	SINE/MIR	162	231	(31)	3701372
521	22.2	1.7	0.0	chr7	99268010	99268126	(60077847)	C	L2a	LINE/L2	(6)	3420	3302	3704334
314	27.1	1.4	10.3	chr7	99268254	99268409	(60077564)	C	MIR3	SINE/MIR	(5)	203	62	3704335
319	29.0	5.9	6.4	chr7	100012849	100013036	(59332937)	C	CR1_Mam	LINE/CR1	(1206)	998	812	3705681
287	18.0	0.0	0.0	chr7	100013042	100013091	(59332882)	+	L1M5	LINE/L1	5626	5675	(449)	3705682
1579	15.3	4.5	7.2	chr7	100148165	100148485	(59197488)	C	AluJr	SINE/Alu	(0)	312	1	3705967
252	30.3	20.0	0.0	chr7	100538496	100538647	(58807326)	+	MIRb	SINE/MIR	26	215	(53)	3706842
246	17.1	0.0	0.0	chr7	100538654	100538694	(58807279)	+	tRNA-Thr-ACA	tRNA	2	42	(34)	3706843
45	2.3	0.0	0.0	chr7	100673816	100673860	(58672113)	+	(CGC)n	Simple_repeat	1	45	(0)	3707120
206	27.3	4.3	7.6	chr7	101170816	101170934	(58175039)	+	MIR1_Amn	SINE/MIR	38	152	(78)	3708151
830	9.3	4.8	0.0	chr7	101252592	101252709	(58093264)	+	L1PREC2	LINE/L1	6037	6160	(0)	3708331
2273	8.7	1.0	1.9	chr7	101252719	101253030	(58092943)	+	AluSx3	SINE/Alu	1	309	(2)	3708332
268	33.3	7.8	2.6	chr7	103146585	103146778	(56199195)	C	MamSINE1	SINE/tRNA-RTE	(61)	229	25	3712294
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
594	18.0	18.5	0.0	chr7	105225840	105226006	(54119967)	C	MER3	DNA/hAT-Charlie	(4)	205	1	3715355
543	23.9	0.9	0.0	chr7	105591546	105591658	(53754315)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	3716192
392	25.6	11.9	5.6	chr7	106048740	106048882	(53297091)	C	MIR3	SINE/MIR	(12)	196	47	3717014
12	15.4	5.3	2.5	chr7	106660255	106660292	(52685681)	+	(GCGCT)n	Simple_repeat	1	40	(0)	3717896
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
411	31.3	7.5	3.4	chr7	112136275	112136479	(47209494)	+	Tigger19a	DNA/TcMar-Tigger	14	227	(96)	3725337
367	33.9	5.2	8.0	chr7	112136503	112136789	(47209184)	C	L2c	LINE/L2	(35)	3352	3073	3725338
267	35.0	11.7	2.6	chr7	112150983	112151141	(47194832)	+	L3b	LINE/CR1	4916	5098	(134)	3725360
480	29.3	5.8	5.5	chr7	112151142	112151399	(47194574)	+	MIRb	SINE/MIR	2	258	(10)	3725361
340	31.2	2.0	0.0	chr7	112572697	112572792	(46773181)	+	L4_A_Mam	LINE/RTE-X	1331	1428	(3562)	3726024
1781	17.1	0.7	1.6	chr7	114123080	114123383	(45222590)	+	AluJr4	SINE/Alu	12	312	(0)	3727979
587	38.4	1.2	2.5	chr7	115099874	115100309	(44245664)	C	L1MEc	LINE/L1	(5931)	469	40	3729259
709	26.7	17.0	4.9	chr7	116200650	116200956	(43145017)	C	MLT1G1	LTR/ERVL-MaLR	(6)	573	222	3730724
1133	18.2	2.3	1.4	chr7	116200950	116201161	(43144812)	+	MLT1C	LTR/ERVL-MaLR	254	467	(0)	3730723
359	29.8	0.9	0.0	chr7	116201199	116201302	(43144671)	+	MLT1G3-int	LTR/ERVL-MaLR	1181	1285	(102)	3730719
8046	19.1	9.0	4.7	chr7	116201693	116203946	(43142027)	C	HAL1M8	LINE/L1	(0)	2991	631	3730726
301	25.9	0.0	2.4	chr7	116216951	116217033	(43128940)	C	L2a	LINE/L2	(10)	3416	3336	3730746
598	18.2	2.1	5.1	chr7	116225902	116226062	(43119911)	+	MIR	SINE/MIR	100	260	(8)	3730755
27325	3.0	0.2	0.0	chr7	116408861	116414874	(42931099)	+	L1PA3	LINE/L1	126	6151	(4)	3731012
13	21.9	2.3	2.2	chr7	116524797	116524840	(42821133)	+	(CTCGCTG)n	Simple_repeat	1	45	(0)	3731164
388	31.0	1.2	6.7	chr7	116554475	116554662	(42791311)	+	MIR3	SINE/MIR	1	179	(89)	3731205
12	14.7	3.3	0.0	chr7	116554697	116554726	(42791247)	+	(CAGTAC)n	Simple_repeat	1	31	(0)	3731206
996	32.5	7.1	5.6	chr7	116729870	116730879	(42615094)	C	L2c	LINE/L2	(1)	3386	2378	3731477
270	9.5	0.0	0.0	chr7	116730923	116730964	(42615009)	C	U7	snRNA	(20)	43	2	3731478
410	29.1	5.8	10.1	chr7	116730967	116731184	(42614789)	C	MIR	SINE/MIR	(34)	228	21	3731479
670	33.0	1.9	0.5	chr7	116805394	116805600	(42540373)	+	MIR	SINE/MIR	6	215	(47)	3731559
17	19.2	0.0	0.0	chr7	117873334	117873369	(41472604)	+	(CCG)n	Simple_repeat	1	36	(0)	3733127
22	11.5	0.0	0.0	chr7	117873506	117873543	(41472430)	+	(CCGGGAG)n	Simple_repeat	1	38	(0)	3733128
21	22.5	4.5	3.3	chr7	117873556	117873643	(41472330)	+	(CGCCCCG)n	Simple_repeat	1	92	(0)	3733129
311	29.0	10.3	8.0	chr7	120842291	120842489	(38503484)	C	L2a	LINE/L2	(2)	3424	3182	3736886
189	35.6	0.0	0.0	chr7	121314646	121314690	(38031283)	C	L2b	LINE/L2	(21)	3354	3310	3737509
3850	8.7	1.7	0.0	chr7	121314742	121315379	(38030594)	+	L1P3	LINE/L1	4793	5445	(727)	3737510
16	0.0	0.0	0.0	chr7	122882618	122882634	(36463339)	+	(T)n	Simple_repeat	1	17	(0)	3739681
180	22.9	15.8	0.0	chr7	124702160	124702207	(34643766)	C	OldhAT1	DNA/hAT-Ac	(1807)	1041	985	3742196
20	29.6	0.0	3.6	chr7	127392070	127392152	(31953821)	+	G-rich	Low_complexity	1	83	(0)	3745667
12	24.2	2.5	0.0	chr7	128167315	128167354	(31178619)	+	(GCGTGT)n	Simple_repeat	1	41	(0)	3746728
624	24.1	9.5	6.4	chr7	128664853	128665087	(30680886)	+	L2a	LINE/L2	3140	3382	(44)	3747744
472	27.5	11.3	5.3	chr7	128665090	128665826	(30680147)	+	L1ME3Cz	LINE/L1	4837	5604	(2278)	3747743
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
14	21.3	2.2	2.2	chr7	129779713	129779779	(29566194)	+	(GCCCC)n	Simple_repeat	1	67	(0)	3749819
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
16	24.7	0.0	0.0	chr7	129825231	129825265	(29520708)	+	(TC)n	Simple_repeat	1	35	(0)	3749924
18	23.7	0.0	6.8	chr7	130440761	130440833	(28905140)	+	(GCCCC)n	Simple_repeat	1	73	(0)	3751167
274	37.5	2.0	1.4	chr7	130918971	130919116	(28426857)	+	MIR3	SINE/MIR	7	153	(55)	3751823
180	27.7	3.0	1.5	chr7	130919163	130919228	(28426745)	+	L2	LINE/L2	2796	2862	(557)	3751824
14	3.6	6.7	3.1	chr7	131507982	131508011	(27837962)	+	(GTTCTA)n	Simple_repeat	1	32	(0)	3752914
556	33.9	9.1	4.9	chr7	132275818	132276205	(27069768)	+	L2a	LINE/L2	2959	3364	(62)	3754160
576	32.8	6.5	2.9	chr7	132430974	132431212	(26914761)	+	MIR	SINE/MIR	15	262	(0)	3754395
624	33.0	6.7	4.6	chr7	133610240	133610633	(25735340)	C	L3	LINE/CR1	(0)	4099	3697	3756207
654	29.6	17.1	0.6	chr7	133797778	133798100	(25547873)	C	L2a	LINE/L2	(3)	3423	3037	3756495
232	16.7	0.0	0.0	chr7	133931282	133931323	(25414650)	+	L2a	LINE/L2	3385	3426	(0)	3756695
3498	8.6	7.9	0.4	chr7	134432178	134432666	(24913307)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3757479
1788	19.3	4.5	1.6	chr7	135260302	135260685	(24085288)	C	MLT2C1	LTR/ERVL	(0)	397	2	3758655
220	30.2	1.6	0.0	chr7	135260719	135260781	(24085192)	C	MIRc	SINE/MIR	(78)	190	127	3758656
280	27.6	7.0	0.7	chr7	135558617	135558762	(23787211)	+	MER20B	DNA/hAT-Charlie	1	156	(627)	3759182
6476	23.1	11.4	11.6	chr7	138030985	138031598	(21314375)	C	HERV35I-int	LTR/ERV1	(5431)	1487	1252	3762762
3710	10.6	1.6	14.0	chr7	138527776	138528547	(20817426)	C	LTR76	LTR/ERV1	(0)	675	1	3763805
1066	19.8	6.3	4.7	chr7	139106677	139107020	(20238953)	+	L1MC5	LINE/L1	8955	9304	(0)	3764940
630	2.8	0.0	0.0	chr7	139340700	139340771	(20005202)	+	tRNA-Arg-AGG	tRNA	1	72	(4)	3765383
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
286	32.5	2.2	3.3	chr7	140645454	140645599	(18700374)	+	MIRb	SINE/MIR	78	222	(46)	3767948
180	25.0	4.2	9.3	chr7	140922334	140922408	(18423565)	+	MER5A	DNA/hAT-Charlie	63	133	(56)	3768434
371	28.8	12.0	2.9	chr7	144835294	144835497	(14510476)	C	MIRb	SINE/MIR	(23)	245	21	3773750
765	0.0	0.0	0.0	chr7	148941488	148941571	(10404402)	+	HY5	scRNA	1	84	(0)	3779656
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
520	30.5	4.6	8.5	chr7	149837774	149838092	(9507881)	+	L2c	LINE/L2	3081	3386	(1)	3781212
887	28.0	14.8	3.0	chr7	149854553	149855044	(9490929)	C	MLT1E2	LTR/ERVL-MaLR	(64)	563	2	3781245
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
2085	19.0	7.4	0.5	chr7	150823773	150824201	(8521772)	+	MER65C	LTR/ERV1	1	461	(0)	3782511
1686	22.0	8.1	3.2	chr7	151003558	151004027	(8341946)	C	L1ME2	LINE/L1	(75)	6089	5595	3782770
12	21.2	7.1	1.7	chr7	151080620	151080675	(8265298)	+	(GCCGCT)n	Simple_repeat	1	60	(0)	3782871
247	23.5	8.1	2.9	chr7	151736812	151736881	(7609092)	C	Plat_L3	LINE/CR1	(3)	3583	3510	3783969
308	30.5	5.9	0.0	chr7	151736883	151736977	(7608996)	C	MIRb	SINE/MIR	(133)	135	35	3783970
2426	20.3	3.9	7.0	chr7	151969393	151969798	(7376175)	C	LTR71B	LTR/ERV1	(0)	610	199	3784341
1434	30.2	6.5	6.1	chr7	152077259	152078209	(7267764)	+	L1MEg	LINE/L1	97	1052	(5032)	3784520
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
274	28.3	4.8	4.8	chr7	152459773	152459898	(6886075)	C	MIR3	SINE/MIR	(71)	137	12	3785176
21	20.0	3.7	1.8	chr7	155003088	155003141	(4342832)	+	(CG)n	Simple_repeat	1	56	(0)	3789015
14	27.5	2.9	2.8	chr7	155003419	155003487	(4342486)	+	G-rich	Low_complexity	1	71	(0)	3789016
914	24.5	10.8	0.4	chr7	155204985	155205258	(4140715)	+	Charlie1a	DNA/hAT-Charlie	1043	1348	(107)	3789347
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
27	18.1	3.5	0.0	chr7	155459300	155459356	(3886617)	+	(TC)n	Simple_repeat	1	59	(0)	3789662
12	17.6	0.0	5.6	chr7	157010779	157010814	(2335159)	+	(CCGCC)n	Simple_repeat	1	36	(0)	3791706
5048	23.1	13.4	8.2	chr7	158614581	158616332	(729641)	+	L1MC5	LINE/L1	7319	9209	(95)	3793441
1424	26.1	10.1	2.9	chr7	158616390	158617346	(728627)	+	HAL1	LINE/L1	425	1797	(668)	3793440
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
21	22.2	0.0	6.5	chr8	6708508	6708584	(138430052)	+	G-rich	Low_complexity	1	77	(0)	3802488
2065	16.9	5.3	1.0	chr8	8297516	8297928	(136840708)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3804481
772	23.2	5.5	2.8	chr8	8299514	8299726	(136838910)	+	L1ME1	LINE/L1	5452	5670	(494)	3804484
14044	13.2	1.6	3.2	chr8	8299732	8301988	(136836648)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	200	3804485
1373	25.9	9.5	6.2	chr8	8625706	8626233	(136512403)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	3805037
50	0.0	0.0	0.0	chr8	9918930	9918972	(135219664)	+	(CA)n	Simple_repeat	1	43	(0)	3807268
18	18.9	4.2	0.0	chr8	9933877	9933924	(135204712)	+	(GCCTC)n	Simple_repeat	1	50	(0)	3807297
208	37.1	5.3	3.3	chr8	9933976	9934159	(135204477)	+	MIRc	SINE/MIR	19	206	(62)	3807298
16	18.6	6.1	0.0	chr8	10054373	10054421	(135084215)	+	(CCGCCCG)n	Simple_repeat	1	52	(0)	3807508
1014	23.4	8.8	0.0	chr8	11342848	11343137	(133795499)	C	MER33	DNA/hAT-Charlie	(0)	324	7	3809465
14	12.7	0.0	0.0	chr8	11343189	11343214	(133795422)	+	(TTTA)n	Simple_repeat	1	26	(0)	3809466
2425	9.9	0.0	0.6	chr8	11473861	11474174	(133664462)	C	AluSx	SINE/Alu	(0)	312	1	3809639
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
13	25.3	2.0	2.0	chr8	11808347	11808395	(133330241)	+	G-rich	Low_complexity	1	50	(0)	3810190
1081	24.5	16.6	0.2	chr8	11863717	11864150	(133274486)	+	L1ME3Cz	LINE/L1	166	684	(313)	3810283
1255	16.8	2.1	9.4	chr8	11864197	11864505	(133274131)	+	AluJb	SINE/Alu	11	296	(16)	3810284
26	23.4	2.0	8.6	chr8	11868121	11868268	(133270368)	+	(CCCCCCG)n	Simple_repeat	1	151	(0)	3810291
39	6.7	0.0	0.0	chr8	16826065	16826111	(128312525)	+	(AC)n	Simple_repeat	1	47	(0)	3817319
259	27.5	2.4	5.9	chr8	17677880	17677964	(127460672)	C	L2c	LINE/L2	(14)	3373	3292	3818556
483	28.9	8.7	2.1	chr8	17763805	17763998	(127374638)	+	MLT1J2	LTR/ERVL-MaLR	111	318	(130)	3818680
610	28.0	2.8	3.2	chr8	18208897	18209114	(126929522)	C	LTR16C	LTR/ERVL	(26)	463	247	3819327
758	13.7	4.0	0.7	chr8	18209330	18209476	(126929160)	+	L1MA6	LINE/L1	6149	6300	(0)	3819328
2199	16.2	10.3	0.0	chr8	18613689	18614115	(126524521)	+	LTR06	LTR/ERV1	1	476	(0)	3819888
497	30.7	12.7	4.2	chr8	18614116	18614318	(126524318)	+	L2a	LINE/L2	3139	3367	(59)	3819887
1980	13.5	1.0	0.7	chr8	18666061	18666349	(126472287)	C	AluSx	SINE/Alu	(21)	291	2	3819952
12304	13.3	7.8	8.3	chr8	18666350	18666472	(126472164)	+	Tigger1	DNA/TcMar-Tigger	2308	2418	(0)	3819951
297	28.4	1.1	0.9	chr8	18954725	18954844	(126183792)	C	MER5A1	DNA/hAT-Charlie	(68)	121	1	3820401
330	26.2	4.4	3.7	chr8	18955013	18955147	(126183489)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	276	3820402
526	26.8	14.0	0.6	chr8	19009346	19009518	(126129118)	+	MIR	SINE/MIR	6	205	(57)	3820496
1055	16.2	0.6	0.6	chr8	22030693	22030865	(123107771)	C	AluJr	SINE/Alu	(25)	287	115	3825464
797	28.4	5.4	11.4	chr8	22030876	22031427	(123107209)	C	L1MEd	LINE/L1	(6301)	802	286	3825454
626	30.5	8.6	4.3	chr8	22556183	22556415	(122582221)	C	MIRb	SINE/MIR	(16)	252	9	3826456
304	18.2	12.0	3.3	chr8	22557172	22557262	(122581374)	+	L2c	LINE/L2	3286	3385	(2)	3826457
12	17.5	7.9	4.4	chr8	22561396	22561458	(122577178)	+	(GCCTGC)n	Simple_repeat	1	68	(0)	3826467
338	23.8	9.5	0.0	chr8	22561601	22561705	(122576931)	+	MIRb	SINE/MIR	114	229	(39)	3826468
1538	18.6	13.1	2.0	chr8	23013805	23014209	(122124427)	C	L1MC5	LINE/L1	(986)	8318	7862	3827211
3060	21.5	11.2	1.6	chr8	23269951	23270466	(121868170)	+	MER97a	DNA/hAT-Tip100	14	612	(278)	3827644
304	13.2	3.6	0.0	chr8	23457015	23457067	(121681569)	+	Charlie29a	DNA/hAT-Charlie	665	719	(0)	3827938
1970	17.0	0.0	0.3	chr8	25997289	25997588	(119141048)	+	AluJo	SINE/Alu	1	299	(13)	3831924
296	29.0	2.7	6.1	chr8	25997636	25997749	(119140887)	+	MIR3	SINE/MIR	16	125	(83)	3831925
29	19.9	0.0	0.0	chr8	26867414	26867467	(118271169)	+	(GT)n	Simple_repeat	1	54	(0)	3833461
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
320	20.0	0.0	3.0	chr8	27873100	27873166	(117265470)	+	MER5A1	DNA/hAT-Charlie	7	71	(95)	3835140
1231	8.3	1.1	2.7	chr8	27873169	27873353	(117265283)	+	HERVH-int	LTR/ERV1	7532	7713	(0)	3835141
356	39.3	4.0	1.0	chr8	27940384	27940576	(117198060)	C	MIR3	SINE/MIR	(6)	202	4	3835249
1882	10.8	0.8	0.4	chr8	28183435	28183692	(116954944)	C	AluSx1	SINE/Alu	(21)	291	33	3835661
232	31.7	1.6	11.8	chr8	28254787	28254922	(116883714)	+	L2c	LINE/L2	3263	3384	(3)	3835778
26	0.0	0.0	0.0	chr8	28363628	28363652	(116774984)	+	(AAAAC)n	Simple_repeat	1	25	(0)	3835985
265	31.6	15.9	4.0	chr8	28707253	28707450	(116431186)	+	MIRb	SINE/MIR	34	259	(9)	3836730
11	31.7	0.0	6.3	chr8	28941401	28941479	(116197157)	+	(TATTTT)n	Simple_repeat	1	79	(0)	3837117
427	32.7	4.2	1.9	chr8	29125281	29125492	(116013144)	+	CR1-3_Croc	LINE/CR1	1860	2076	(1529)	3837381
227	34.7	6.2	0.0	chr8	29125507	29125627	(116013009)	+	CR1-L3A_Croc	LINE/CR1	3278	3406	(882)	3837382
261	22.7	11.1	0.0	chr8	29125635	29125722	(116012914)	+	L3	LINE/CR1	3256	3354	(745)	3837383
16	16.2	0.0	0.0	chr8	29125733	29125760	(116012876)	+	A-rich	Low_complexity	1	28	(0)	3837384
414	26.6	6.8	0.4	chr8	29263599	29263743	(115874893)	+	MIR	SINE/MIR	28	179	(51)	3837624
581	19.4	17.8	0.0	chr8	29665664	29665802	(115472834)	C	MER5B	DNA/hAT-Charlie	(2)	176	8	3838309
4431	17.4	6.8	2.0	chr8	30057374	30058176	(115080460)	C	ERVL-B4-int	LTR/ERVL	(2601)	3113	2270	3838963
246	34.1	6.2	0.0	chr8	30083467	30083557	(115055079)	+	L2b	LINE/L2	3289	3418	(8)	3838998
410	21.5	9.7	10.2	chr8	30726906	30727071	(114411565)	+	MER5B	DNA/hAT-Charlie	14	178	(0)	3840307
1260	20.8	8.2	5.0	chr8	31034613	31035057	(114103579)	C	LTR56	LTR/ERV1	(5)	440	9	3840916
624	32.1	6.7	6.2	chr8	32927780	32928214	(112210422)	+	LTR33	LTR/ERVL	23	466	(49)	3843702
267	28.0	10.7	4.5	chr8	33561051	33561207	(111577429)	C	MIRb	SINE/MIR	(50)	218	51	3844767
373	30.2	4.1	5.4	chr8	37229362	37229711	(107908925)	+	L1ME3A	LINE/L1	4361	4705	(1441)	3850022
2677	22.1	1.6	3.0	chr8	37336735	37337294	(107801342)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	3850159
267	30.1	2.8	0.0	chr8	37360024	37360126	(107778510)	+	MIR3	SINE/MIR	48	153	(55)	3850196
1286	23.2	4.9	1.2	chr8	37376375	37376710	(107761926)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	116	3850221
290	24.5	10.5	0.0	chr8	37376805	37376898	(107761738)	C	MLT1C	LTR/ERVL-MaLR	(356)	111	7	3850221
19	7.1	3.1	3.0	chr8	37453228	37453259	(107685377)	+	(GA)n	Simple_repeat	1	33	(0)	3850345
534	30.6	5.2	7.2	chr8	37454799	37455214	(107683422)	C	MLT1J1	LTR/ERVL-MaLR	(37)	407	1	3850346
14	5.0	0.0	0.0	chr8	37538297	37538317	(107600319)	+	(AAT)n	Simple_repeat	1	21	(0)	3850479
430	27.4	18.1	3.2	chr8	37597094	37597312	(107541324)	C	MIR	SINE/MIR	(2)	260	2	3850600
798	27.6	4.4	5.2	chr8	37672216	37672467	(107466169)	C	MIRb	SINE/MIR	(17)	251	2	3850755
281	26.9	9.9	4.6	chr8	37691429	37691580	(107447056)	C	L2c	LINE/L2	(88)	3299	3139	3850797
18	22.2	6.7	1.2	chr8	37796835	37796922	(107341714)	+	(CGGCAG)n	Simple_repeat	1	92	(0)	3850992
478	20.0	0.0	0.0	chr8	37905649	37905733	(107232903)	C	AluJb	SINE/Alu	(5)	307	223	3851182
2546	8.8	17.8	0.0	chr8	37905765	37906160	(107232476)	C	MER51E	LTR/ERV1	(0)	482	1	3851183
255	30.0	13.0	0.0	chr8	38365322	38365401	(106773235)	C	L2a	LINE/L2	(22)	3404	3313	3852157
1947	9.0	9.2	0.4	chr8	38365479	38365744	(106772892)	C	AluSx1	SINE/Alu	(19)	293	2	3852158
1831	16.4	0.0	1.0	chr8	38444388	38444691	(106693945)	C	AluSx1	SINE/Alu	(11)	301	1	3852293
488	22.9	13.3	7.4	chr8	38899416	38899591	(106239045)	C	MIR	SINE/MIR	(17)	213	20	3853170
1992	11.9	2.1	0.4	chr8	41581994	41582303	(103556333)	C	AluSx	SINE/Alu	(0)	312	1	3857283
250	34.0	2.8	3.7	chr8	41582306	41582412	(103556224)	C	MIR3	SINE/MIR	(97)	111	6	3857284
38	0.0	0.0	0.0	chr8	41582445	41582477	(103556159)	+	(AC)n	Simple_repeat	1	33	(0)	3857285
13	19.8	0.0	6.5	chr8	41828226	41828271	(103310365)	+	(CCCCG)n	Simple_repeat	1	46	(0)	3857668
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
291	30.0	6.5	0.0	chr8	43081455	43081554	(102057082)	C	MIR	SINE/MIR	(130)	132	26	3860080
1879	16.2	0.7	1.0	chr8	43081560	43081862	(102056774)	C	AluJr	SINE/Alu	(9)	303	2	3860081
19	24.5	1.6	3.2	chr8	56060367	56060427	(89078209)	+	(AC)n	Simple_repeat	1	62	(0)	3873469
1570	12.3	0.0	20.5	chr8	56060432	56060821	(89077815)	+	AluJb	SINE/Alu	2	311	(1)	3873470
543	0.0	0.0	21.5	chr8	66113367	66113459	(79025177)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886877
409	20.4	3.1	1.1	chr8	68391651	68391744	(76746892)	C	MLT1I	LTR/ERVL-MaLR	(35)	376	281	3890645
743	31.7	1.8	0.0	chr8	68391757	68391980	(76746656)	C	MLT1I	LTR/ERVL-MaLR	(175)	236	9	3890645
3192	24.0	6.3	2.0	chr8	68547686	68548886	(76589750)	+	L1ME2	LINE/L1	4796	6030	(307)	3890838
26	24.3	0.0	0.0	chr8	69588473	69588531	(75550105)	+	(TG)n	Simple_repeat	1	59	(0)	3892249
418	31.5	7.1	6.6	chr8	70332909	70333119	(74805517)	C	MIRb	SINE/MIR	(42)	226	15	3893637
406	28.3	5.0	0.7	chr8	71348659	71348811	(73789825)	+	L2	LINE/L2	2899	3058	(361)	3895122
406	19.9	8.7	5.3	chr8	72316564	72316720	(72821916)	+	LTR50	LTR/ERVL	1	160	(635)	3896292
35	22.6	1.3	0.0	chr8	78515795	78515872	(66622764)	+	(TG)n	Simple_repeat	1	79	(0)	3904791
1505	20.8	9.8	0.5	chr8	94857472	94857867	(50280769)	C	MLT1C	LTR/ERVL-MaLR	(9)	458	22	3927724
15	5.6	0.0	0.0	chr8	96553451	96553469	(48585167)	+	(T)n	Simple_repeat	1	19	(0)	3930485
1828	15.7	1.7	7.5	chr8	96553773	96554090	(48584546)	C	AluJb	SINE/Alu	(13)	299	1	3930486
1707	13.3	1.3	7.8	chr8	98045693	98046014	(47092622)	+	AluJb	SINE/Alu	1	301	(11)	3932979
329	29.9	4.6	2.0	chr8	102376990	102377136	(42761500)	C	MER103C	DNA/hAT-Charlie	(77)	220	70	3940187
19	15.2	8.7	2.7	chr8	103020989	103021057	(42117579)	+	(CGGCAG)n	Simple_repeat	1	75	(0)	3941612
1596	24.6	6.8	6.3	chr8	103511744	103512358	(41626278)	C	LTR41C	LTR/ERVL	(8)	693	4	3942441
1570	22.2	4.4	3.1	chr8	105459482	105459863	(39678773)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	4	3945170
279	34.3	6.5	8.0	chr8	105459865	105460238	(39678398)	+	MamGypLTR3a	LTR/Gypsy	377	744	(237)	3945171
240	35.3	4.8	4.0	chr8	105462294	105462417	(39676219)	C	MIRb	SINE/MIR	(114)	154	30	3945173
1546	17.6	0.0	6.9	chr8	108239178	108239495	(36899141)	C	AluJb	SINE/Alu	(10)	302	7	3949046
22	0.0	0.0	0.0	chr8	108760974	108760997	(36377639)	+	(GT)n	Simple_repeat	1	24	(0)	3949849
11	24.7	4.0	1.9	chr8	109539801	109539850	(35598786)	+	(GCGAGC)n	Simple_repeat	1	52	(0)	3950981
15	20.7	5.1	0.0	chr8	109539836	109539874	(35598762)	+	(GC)n	Simple_repeat	1	41	(0)	3950982
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
406	25.5	4.9	2.2	chr8	115576464	115576630	(29562006)	C	MIRc	SINE/MIR	(31)	177	9	3958870
298	26.2	0.9	3.6	chr8	119641637	119641747	(25496889)	C	MER5A	DNA/hAT-Charlie	(2)	187	80	3965110
775	21.7	13.0	1.7	chr8	119641831	119642069	(25496567)	C	LTR53	LTR/ERVL	(248)	271	2	3965111
35	38.6	0.6	1.8	chr8	123058746	123058890	(22079746)	+	(ATATAC)n	Simple_repeat	1	143	(0)	3971074
185	25.4	1.6	6.0	chr8	124202539	124202605	(20936031)	C	L2a	LINE/L2	(16)	3410	3347	3973280
617	22.9	5.7	2.4	chr8	124202620	124202789	(20935847)	+	MIR	SINE/MIR	11	186	(76)	3973281
501	27.5	2.8	1.2	chr8	124202762	124202934	(20935702)	C	MIRb	SINE/MIR	(11)	257	82	3973282
520	20.9	3.3	2.6	chr8	124538752	124538903	(20599733)	C	L1ME3A	LINE/L1	(17)	6156	6004	3973888
431	25.0	13.4	0.0	chr8	132674937	132675072	(12463564)	C	MIR	SINE/MIR	(104)	158	2	3989013
211	24.0	11.5	2.9	chr8	132675090	132675192	(12463444)	C	MIRb	SINE/MIR	(133)	135	23	3989014
1900	27.6	13.8	3.5	chr8	140794368	140795405	(4343231)	+	L2a	LINE/L2	1840	3001	(418)	4002602
313	28.1	8.9	2.1	chr8	140806922	140807093	(4331543)	+	L2a	LINE/L2	3194	3390	(36)	4002618
203	36.2	0.0	0.0	chr8	140807107	140807164	(4331472)	C	L2a	LINE/L2	(25)	3401	3344	4002621
1049	19.3	8.6	2.5	chr8	140898047	140898347	(4240289)	C	MER5C	DNA/hAT-Charlie	(0)	313	12	4002763
236	11.4	0.0	0.0	chr8	141001818	141001852	(4136784)	C	MIRc	SINE/MIR	(120)	148	114	4002964
16	18.8	1.9	5.5	chr8	143840975	143841028	(1297608)	+	G-rich	Low_complexity	1	55	(0)	4006733
33	0.0	0.0	0.0	chr8	143952182	143952209	(1186427)	+	(AC)n	Simple_repeat	1	28	(0)	4006869
249	27.4	10.2	7.8	chr9	282168	282282	(138112435)	+	L2b	LINE/L2	3252	3369	(6)	4008915
24	13.0	2.4	0.0	chr9	506517	506562	(137888155)	+	(GT)n	Simple_repeat	1	47	(0)	4009291
485	34.0	0.8	0.5	chr9	2771672	2771863	(135622854)	C	MIRc	SINE/MIR	(37)	231	36	4012622
15	8.1	0.0	3.6	chr9	4298042	4298069	(134096648)	+	(GCGA)n	Simple_repeat	1	28	(0)	4014804
5732	17.9	4.5	0.6	chr9	4780313	4781342	(133613375)	+	L1M1	LINE/L1	5	1076	(6489)	4015670
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
19	19.6	0.0	0.0	chr9	12775843	12775883	(125618834)	+	(GCG)n	Simple_repeat	1	41	(0)	4026707
15	28.1	0.0	0.0	chr9	12775864	12775907	(125618810)	+	(GCA)n	Simple_repeat	1	44	(0)	4026708
13	23.9	0.0	2.4	chr9	12775911	12775951	(125618766)	+	(CCT)n	Simple_repeat	1	41	(0)	4026709
7404	20.6	4.8	4.5	chr9	12783852	12785961	(125608756)	C	L1MA3	LINE/L1	(5091)	2474	8	4026717
21	25.9	2.8	1.4	chr9	14314680	14314751	(124079966)	+	(CCT)n	Simple_repeat	1	74	(0)	4028786
12	25.6	0.0	0.0	chr9	14320500	14320536	(124074181)	+	A-rich	Low_complexity	1	37	(0)	4028793
596	29.2	7.4	3.6	chr9	18067743	18068104	(120326613)	+	Plat_L3	LINE/CR1	3158	3534	(52)	4034156
461	28.7	0.9	0.0	chr9	18393385	18393492	(120001225)	+	MER81	DNA/hAT-Blackjack	6	114	(0)	4034606
995	26.9	0.0	0.4	chr9	18667411	18667664	(119727053)	+	MIR	SINE/MIR	2	254	(8)	4034961
211	15.3	0.0	0.0	chr9	18976929	18976967	(119417750)	+	MIRb	SINE/MIR	195	237	(31)	4035338
1788	14.1	1.7	1.4	chr9	19130262	19130440	(119264277)	+	LTR49	LTR/ERV1	110	287	(308)	4035631
2057	15.4	1.2	1.2	chr9	19130441	19130776	(119263941)	C	MER1B	DNA/hAT-Charlie	(1)	338	3	4035633
15	13.9	0.0	0.0	chr9	20472906	20472929	(117921788)	+	(A)n	Simple_repeat	1	24	(0)	4037926
762	24.7	1.7	0.6	chr9	20472973	20473143	(117921574)	+	MER5A	DNA/hAT-Charlie	17	189	(0)	4037927
835	16.8	2.4	1.2	chr9	20495233	20495395	(117899322)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	4037956
516	18.9	5.4	6.2	chr9	20496606	20496735	(117897982)	+	LTR33C	LTR/ERVL	1	129	(500)	4037957
965	26.0	19.3	3.9	chr9	20640334	20640798	(117753919)	+	MLT1G3	LTR/ERVL-MaLR	40	577	(2)	4038170
2236	13.0	1.4	0.3	chr9	20728200	20728555	(117666162)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	1	4038349
429	30.2	24.6	2.9	chr9	20728770	20729058	(117665659)	C	MLT1O	LTR/ERVL-MaLR	(8)	534	182	4038350
560	23.1	2.8	0.9	chr9	21096958	21097112	(117297605)	C	MIR	SINE/MIR	(0)	268	107	4038849
241	30.2	8.7	4.1	chr9	23717748	23717868	(114676849)	+	L2b	LINE/L2	3241	3367	(8)	4042225
597	34.1	5.0	0.5	chr9	27247646	27247857	(111146860)	C	MIR	SINE/MIR	(31)	231	10	4046871
11	22.3	0.0	6.4	chr9	27366050	27366096	(111028621)	+	G-rich	Low_complexity	1	47	(0)	4047030
1853	14.7	1.7	1.4	chr9	27440857	27441146	(110953571)	C	MER1B	DNA/hAT-Charlie	(0)	339	49	4047153
283	32.0	9.6	1.6	chr9	33151538	33151661	(105243056)	+	MIRb	SINE/MIR	123	257	(11)	4054837
1718	23.7	9.5	7.5	chr9	33880186	33880662	(104514055)	C	L1MC3	LINE/L1	(3059)	3087	2571	4056206
1753	12.8	10.3	7.6	chr9	33880663	33880991	(104513726)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	4056208
14481	11.9	4.2	3.0	chr9	34213530	34215697	(104179020)	+	L1PA10	LINE/L1	4010	6167	(1)	4057010
416	29.5	0.0	1.8	chr9	35658839	35658952	(102735765)	+	MIRc	SINE/MIR	125	236	(32)	4059252
309	23.5	8.6	2.3	chr9	35658985	35659071	(102735646)	C	MIR	SINE/MIR	(147)	115	23	4059253
584	33.9	5.2	0.4	chr9	36922609	36922848	(101471869)	C	MIR	SINE/MIR	(2)	260	9	4061708
13	22.6	0.0	0.0	chr9	36922898	36922933	(101471784)	+	(CATCCAC)n	Simple_repeat	1	36	(0)	4061709
584	31.5	11.8	1.3	chr9	36928641	36929026	(101465691)	+	L4_C_Mam	LINE/RTE-X	4515	4946	(192)	4061721
2278	9.7	0.0	1.3	chr9	37466643	37466940	(100927777)	+	AluSx1	SINE/Alu	2	295	(17)	4062719
271	37.4	1.1	0.0	chr9	37594595	37594723	(100799994)	+	MIR3	SINE/MIR	4	133	(97)	4062999
1304	7.8	0.0	1.2	chr9	37594732	37594907	(100799810)	C	AluSc8	SINE/Alu	(0)	311	133	4063000
1652	31.8	11.5	2.5	chr9	70382438	70383855	(68010862)	+	L2a	LINE/L2	1859	3423	(3)	4083046
186	24.4	0.0	0.0	chr9	70418275	70418315	(67976402)	C	MER5A	DNA/hAT-Charlie	(52)	137	97	4083111
226	15.6	4.3	4.3	chr9	70418361	70418407	(67976310)	C	MER5A	DNA/hAT-Charlie	(30)	159	113	4083112
521	29.9	13.6	1.5	chr9	70746299	70746757	(67647960)	+	LTR84b	LTR/ERVL	241	757	(0)	4083682
261	29.1	17.5	1.8	chr9	70746760	70746898	(67647819)	C	MIRb	SINE/MIR	(103)	165	2	4083680
188	26.6	9.2	14.2	chr9	70747076	70747237	(67647480)	C	L2a	LINE/L2	(0)	3426	3274	4083683
920	22.7	3.3	1.4	chr9	70747566	70747775	(67646942)	+	MER58C	DNA/hAT-Charlie	2	215	(0)	4083684
248	23.9	8.2	0.0	chr9	75197637	75197703	(63197014)	+	L2b	LINE/L2	3303	3375	(0)	4090708
297	24.7	0.0	2.7	chr9	76366447	76366521	(62028196)	C	MLT1L	LTR/ERVL-MaLR	(414)	196	124	4092392
490	18.4	12.8	0.0	chr9	77099338	77099446	(61295271)	C	MER5A1	DNA/hAT-Charlie	(1)	165	41	4093746
448	28.0	10.3	5.2	chr9	77392376	77392556	(61002161)	+	MIRb	SINE/MIR	26	208	(60)	4094219
12829	12.8	4.8	6.0	chr9	77392557	77392709	(61002008)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	2249	4094220
59	4.4	0.0	1.4	chr9	77392710	77392781	(61001936)	+	(AAAACTATAT)n	Simple_repeat	1	72	(0)	4094221
2393	7.7	0.0	2.6	chr9	78235587	78235899	(60158818)	C	AluSq2	SINE/Alu	(8)	305	1	4095457
1969	15.1	0.3	11.1	chr9	79684291	79684670	(58710047)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	4097595
473	26.5	33.0	2.3	chr9	79684671	79684927	(58709790)	C	MLT1H2	LTR/ERVL-MaLR	(213)	336	1	4097596
258	26.7	1.6	0.0	chr9	81724588	81724647	(56670070)	+	UCON55	DNA/TcMar-Tigger	35	95	(97)	4100383
213	26.4	17.2	0.0	chr9	81724648	81724753	(56669964)	C	L3b	LINE/CR1	(283)	4949	4822	4100384
742	24.0	11.1	0.5	chr9	83965134	83965342	(54429375)	C	LTR16A1	LTR/ERVL	(0)	456	223	4103841
1164	9.5	0.0	0.0	chr9	83965530	83965676	(54429041)	C	AluSq	SINE/Alu	(19)	294	148	4103842
619	24.0	11.8	6.2	chr9	85396488	85396727	(52997990)	C	MIR	SINE/MIR	(0)	262	8	4106144
23852	7.3	1.0	0.6	chr9	85717680	85723818	(52670899)	C	L1PA6	LINE/L1	(0)	6327	178	4106622
2321	9.0	0.7	0.3	chr9	86106675	86106973	(52287744)	+	AluY	SINE/Alu	1	300	(11)	4107315
1751	18.8	2.1	1.3	chr9	86107138	86107515	(52287202)	+	L1MA4	LINE/L1	5863	6243	(57)	4107316
261	25.3	4.0	8.7	chr9	86586299	86586402	(51808315)	C	L2c	LINE/L2	(1)	3386	3288	4108128
34	3.0	0.0	0.0	chr9	86731546	86731579	(51663138)	+	(AC)n	Simple_repeat	1	34	(0)	4108367
388	32.0	6.0	2.5	chr9	87206498	87206721	(51187996)	+	MIRc	SINE/MIR	1	229	(39)	4109105
17	0.0	0.0	0.0	chr9	91714348	91714366	(46680351)	+	(A)n	Simple_repeat	1	19	(0)	4115645
259	29.9	18.6	2.0	chr9	92765544	92765600	(45629117)	C	L1MC4	LINE/L1	(191)	7851	7791	4117180
2677	19.9	11.5	0.0	chr9	92765601	92766169	(45628548)	+	MER73	LTR/ERVL	2	644	(0)	4117181
355	28.7	8.8	0.8	chr9	93159575	93159727	(45234990)	+	L2b	LINE/L2	3230	3426	(0)	4117822
381	32.4	10.1	0.0	chr9	93159728	93159897	(45234820)	+	MIRb	SINE/MIR	42	230	(38)	4117824
12	23.5	1.8	5.4	chr9	95317779	95317833	(43076884)	+	G-rich	Low_complexity	1	56	(0)	4121019
486	37.0	6.0	1.7	chr9	95409670	95409991	(42984726)	C	L3b	LINE/CR1	(390)	3709	3410	4121184
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
15	16.5	3.8	5.5	chr9	95980748	95980800	(42413917)	+	A-rich	Low_complexity	1	55	(0)	4122041
15	11.7	0.0	0.0	chr9	104747886	104747913	(33646804)	+	(GAGGG)n	Simple_repeat	1	28	(0)	4136198
3132	19.3	8.8	4.6	chr9	105055769	105056483	(33338234)	+	MER101-int	LTR/ERV1	2312	3344	(3295)	4136788
2848	21.0	12.6	3.3	chr9	105539534	105540718	(32853999)	C	L1ME3A	LINE/L1	(13)	6160	4835	4137688
551	29.0	11.6	5.7	chr9	105697392	105697941	(32696776)	C	L1ME1	LINE/L1	(601)	5815	5226	4137938
288	19.8	9.0	0.0	chr9	105698127	105698207	(32696510)	+	MLT1N2	LTR/ERVL-MaLR	463	551	(11)	4137940
1173	23.2	4.9	6.3	chr9	105890457	105890852	(32503865)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	4138175
1533	24.3	7.4	0.0	chr9	107275034	107275473	(31119244)	+	L2a	LINE/L2	2578	3052	(367)	4140344
2271	10.9	0.0	3.5	chr9	109107106	109107417	(29287300)	+	AluSz	SINE/Alu	1	301	(11)	4143805
15	11.2	0.0	3.2	chr9	109107493	109107523	(29287194)	+	(CCTG)n	Simple_repeat	1	31	(0)	4143806
317	23.3	12.0	7.2	chr9	111961520	111961630	(26433087)	C	L1MD	LINE/L1	(2880)	3266	3150	4148883
270	27.4	1.6	0.0	chr9	111961710	111961771	(26432946)	C	L2b	LINE/L2	(0)	3375	3313	4148884
1013	20.4	1.0	4.6	chr9	111961785	111962000	(26432717)	C	MER63A	DNA/hAT-Blackjack	(2)	208	1	4148885
220	34.2	26.0	2.3	chr9	111965436	111965666	(26429051)	C	L3	LINE/CR1	(2522)	1577	1292	4148882
239	33.8	9.4	5.9	chr9	111965667	111965902	(26428815)	C	L2c	LINE/L2	(33)	3354	3110	4148893
1908	17.1	0.0	0.3	chr9	112158394	112158691	(26236026)	C	AluJb	SINE/Alu	(15)	297	1	4149272
372	33.3	6.6	7.9	chr9	112158692	112158917	(26235800)	+	L2c	LINE/L2	3159	3387	(0)	4149271
219	30.9	15.9	4.0	chr9	112784592	112784790	(25609927)	C	MIRc	SINE/MIR	(12)	256	30	4150517
24	14.3	0.0	6.5	chr9	113222716	113222777	(25171940)	+	(AACTAG)n	Simple_repeat	1	62	(0)	4151226
2126	8.2	2.3	3.6	chr9	113339729	113340034	(25054683)	C	AluSx	SINE/Alu	(10)	302	1	4151455
285	36.8	2.5	0.8	chr9	113620438	113620555	(24774162)	C	MIR3	SINE/MIR	(0)	208	89	4152031
715	27.9	5.8	1.3	chr9	114141875	114142103	(24252614)	+	MIR	SINE/MIR	9	248	(14)	4153040
17	5.0	0.0	0.0	chr9	115214017	115214037	(23180680)	+	(A)n	Simple_repeat	1	21	(0)	4155215
402	27.9	3.9	4.5	chr9	120793617	120793770	(17600947)	C	MIRb	SINE/MIR	(29)	239	87	4165721
348	23.6	0.0	0.0	chr9	120935714	120935785	(17458932)	C	MER102c	DNA/hAT-Charlie	(205)	126	55	4166023
795	30.5	5.4	6.5	chr9	123282481	123282834	(15111883)	+	L2c	LINE/L2	3016	3365	(10)	4170396
1979	24.8	16.3	3.0	chr9	123282930	123283822	(15110895)	+	L2	LINE/L2	1538	2572	(847)	4170397
274	35.4	0.0	0.0	chr9	123864760	123864855	(14529862)	+	Charlie19a	DNA/hAT-Charlie	88	183	(203)	4171392
589	22.0	2.5	0.0	chr9	123864856	123864973	(14529744)	C	L2a	LINE/L2	(1)	3425	3305	4171393
227	28.0	18.6	0.0	chr9	124835413	124835591	(13559126)	C	MIRb	SINE/MIR	(2)	266	32	4173344
379	33.4	6.0	7.5	chr9	125200942	125201383	(13193334)	C	L2b	LINE/L2	(1)	3386	2964	4174125
15	0.0	0.0	0.0	chr9	125542055	125542071	(12852646)	+	(TC)n	Simple_repeat	1	17	(0)	4174868
215	37.1	4.0	10.9	chr9	125932220	125932540	(12462177)	+	L2c	LINE/L2	3090	3387	(0)	4175533
372	32.5	11.9	3.2	chr9	126648963	126649337	(11745380)	+	L2c	LINE/L2	2458	2869	(550)	4176764
824	22.8	0.0	0.5	chr9	126649438	126649622	(11745095)	C	MER5A	DNA/hAT-Charlie	(5)	184	1	4176765
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
2348	10.1	0.0	0.0	chr9	128093868	128094163	(10300554)	+	AluSg	SINE/Alu	1	296	(14)	4179768
16	25.9	1.6	3.1	chr9	128160164	128160226	(10234491)	+	G-rich	Low_complexity	1	64	(0)	4179864
13	19.4	0.0	2.7	chr9	128191414	128191450	(10203267)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	4179938
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
23	10.2	0.0	4.3	chr9	129482661	129482735	(8911982)	+	(GGAGGGG)n	Simple_repeat	1	71	(0)	4182935
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
756	15.6	8.6	0.0	chr9	129524473	129524632	(8870085)	C	L1MC1	LINE/L1	(13)	6320	6146	4183042
12	12.8	5.6	2.6	chr9	129892137	129892172	(8502545)	+	A-rich	Low_complexity	1	38	(0)	4183842
2369	8.8	1.0	0.0	chr9	129893638	129893933	(8500784)	+	AluSc8	SINE/Alu	2	300	(11)	4183845
215	22.7	10.8	2.9	chr9	131501192	131501259	(6893458)	+	MIR3	SINE/MIR	45	118	(90)	4187190
10630	15.4	3.1	3.0	chr9	131928295	131930106	(6464611)	+	L1MA2	LINE/L1	13	1826	(5739)	4187952
1595	21.9	9.1	2.3	chr9	133144780	133145210	(5249507)	+	MLT1C	LTR/ERVL-MaLR	1	463	(4)	4190129
14	26.3	4.9	3.5	chr9	133375819	133375900	(5018817)	+	G-rich	Low_complexity	1	86	(0)	4190475
20	8.8	7.7	3.6	chr9	133375984	133376035	(5018682)	+	(GCTC)n	Simple_repeat	1	56	(0)	4190476
310	17.8	0.2	0.3	chr9	133953148	133953215	(4441502)	+	MLT1D	LTR/ERVL-MaLR	330	391	(76)	4191312
828	21.4	6.0	0.0	chr9	135961603	135961836	(2432881)	+	MER33	DNA/hAT-Charlie	76	324	(0)	4193847
57	1.7	1.6	1.6	chr9	136051877	136051939	(2342778)	+	(AGG)n	Simple_repeat	1	64	(0)	4193971
229	31.0	10.1	0.8	chr9	136143350	136143466	(2251251)	+	MIRc	SINE/MIR	16	144	(124)	4194084
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
12	26.5	3.2	3.1	chr9	136410607	136410668	(1984049)	+	(AGCGGA)n	Simple_repeat	1	64	(0)	4194344
13	12.1	3.6	0.0	chr9	136687065	136687092	(1707625)	+	G-rich	Low_complexity	1	29	(0)	4194649
19	14.1	2.6	0.0	chr9	136687298	136687336	(1707381)	+	(CAG)n	Simple_repeat	1	40	(0)	4194650
3968	10.7	2.0	0.0	chr9	137075103	137075645	(1319072)	+	MER41A	LTR/ERV1	1	554	(0)	4195198
2142	10.5	0.0	6.9	chr9	137075656	137075988	(1318729)	C	AluSp	SINE/Alu	(1)	312	3	4195199
668	13.9	1.9	0.0	chr9	137128858	137128958	(1265759)	+	AluJb	SINE/Alu	197	299	(13)	4195270
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
14732	11.4	1.9	6.0	chrX	12147666	12150183	(143890712)	+	Tigger1	DNA/TcMar-Tigger	6	2418	(0)	4379088
351	22.8	6.6	5.3	chrX	12320245	12320372	(143720523)	C	MIR3	SINE/MIR	(92)	176	35	4379370
16	33.6	0.0	1.6	chrX	15855065	15855125	(140185770)	+	(CG)n	Simple_repeat	1	61	(0)	4385079
1200	18.7	5.0	1.9	chrX	16711109	16711419	(139329476)	C	MER33	DNA/hAT-Charlie	(3)	321	1	4386532
1053	22.8	3.4	1.5	chrX	16711490	16711752	(139329143)	+	L1ME2	LINE/L1	5885	6152	(12)	4386533
2168	9.3	5.5	0.0	chrX	23806392	23806682	(132234213)	C	AluSc	SINE/Alu	(0)	309	2	4398126
183	29.1	1.8	1.8	chrX	23806741	23806796	(132234099)	C	MIRb	SINE/MIR	(54)	214	159	4398127
2357	9.1	0.3	1.3	chrX	23806891	23807199	(132233696)	+	AluSx1	SINE/Alu	1	306	(6)	4398128
2085	18.7	8.7	4.5	chrX	23820302	23820710	(132220185)	C	L1MB7	LINE/L1	(353)	5831	5339	4398163
729	17.4	2.2	0.8	chrX	23902079	23902211	(132138684)	C	MER5B	DNA/hAT-Charlie	(43)	135	1	4398352
12	25.3	2.4	0.0	chrX	24054205	24054246	(131986649)	+	(AACA)n	Simple_repeat	1	43	(0)	4398695
2258	22.2	8.1	11.5	chrX	24144802	24145855	(131895040)	C	L1MC5	LINE/L1	(459)	8845	7965	4398937
276	21.1	8.4	2.6	chrX	24171684	24171761	(131869134)	C	MLT1O	LTR/ERVL-MaLR	(52)	490	408	4398991
48	0.0	4.2	0.0	chrX	24171895	24171942	(131868953)	+	(AG)n	Simple_repeat	1	50	(0)	4398992
2317	8.1	0.0	0.0	chrX	24474379	24474713	(131566182)	C	AluSx	SINE/Alu	(0)	312	1	4399597
186	29.2	9.1	5.5	chrX	31424434	31424560	(124616335)	+	L3	LINE/CR1	919	1050	(3049)	4409781
225	33.8	0.0	1.4	chrX	33132618	33132686	(122908209)	+	MIR	SINE/MIR	76	143	(119)	4412211
576	28.5	8.2	4.5	chrX	33132717	33132940	(122907955)	+	MIRb	SINE/MIR	33	265	(3)	4412212
364	29.0	8.9	3.7	chrX	39971587	39971776	(116069119)	C	LTR67B	LTR/ERVL	(8)	612	412	4421552
354	22.4	2.6	0.0	chrX	39971872	39971947	(116068948)	C	LTR67B	LTR/ERVL	(450)	170	93	4421552
235	24.7	3.8	2.5	chrX	39971886	39971964	(116068931)	C	MLT1N2	LTR/ERVL-MaLR	(385)	177	98	4421553
1581	18.2	8.2	5.1	chrX	41111073	41111425	(114929470)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	4423693
35	26.4	2.8	3.4	chrX	41333339	41333480	(114707415)	+	(CTCCC)n	Simple_repeat	1	146	(0)	4424165
843	27.6	2.1	2.1	chrX	41931402	41931634	(114109261)	C	MIRb	SINE/MIR	(0)	268	36	4425268
229	24.3	0.0	5.7	chrX	41931769	41931852	(114109043)	C	MIRb	SINE/MIR	(0)	262	183	4425269
515	29.2	2.6	3.3	chrX	41931844	41931995	(114108900)	C	L2c	LINE/L2	(6)	3381	3231	4425270
12	0.0	5.3	0.0	chrX	47836326	47836344	(108204551)	+	(CTC)n	Simple_repeat	1	20	(0)	4434904
259	29.0	4.1	0.0	chrX	47837048	47837140	(108203755)	C	L1ME3F	LINE/L1	(3059)	3087	2991	4434894
11	16.4	5.9	0.0	chrX	48521915	48521948	(107518947)	+	(CCCTGCT)n	Simple_repeat	1	36	(0)	4436239
15	18.1	0.0	0.0	chrX	48696543	48696574	(107344321)	+	(CCG)n	Simple_repeat	1	32	(0)	4436655
34	6.7	0.0	2.0	chrX	48957716	48957764	(107083131)	+	(CGG)n	Simple_repeat	1	49	(0)	4437164
2214	12.2	0.0	0.0	chrX	49190483	49190814	(106850081)	C	AluJb	SINE/Alu	(0)	312	5	4437676
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
830	30.8	12.6	2.3	chrX	53427442	53427913	(102612982)	C	L2b	LINE/L2	(13)	3362	2839	4443730
235	33.9	4.8	0.2	chrX	54640098	54640214	(101400681)	+	L2c	LINE/L2	3224	3343	(44)	4446205
14688	15.4	6.7	5.9	chrX	55148083	55150235	(100890660)	+	MER4-int	LTR/ERV1	1687	4928	(1670)	4446827
2384	13.9	0.3	0.0	chrX	55150236	55150573	(100890322)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	4446828
10808	9.4	3.0	5.8	chrX	64276042	64278460	(91762435)	C	L1P2	LINE/L1	(2854)	3292	945	4451152
505	31.1	2.7	2.8	chrX	65595707	65595907	(90444988)	C	MIR3	SINE/MIR	(1)	207	7	4452584
1998	14.3	0.7	0.0	chrX	68078705	68078984	(87961911)	+	AluSz	SINE/Alu	2	283	(29)	4455619
48	0.0	0.0	2.1	chrX	68078985	68079032	(87961863)	+	(AAAT)n	Simple_repeat	1	48	(0)	4455620
1202	32.8	17.1	3.1	chrX	68079033	68080263	(87960632)	+	L2c	LINE/L2	1544	2990	(429)	4455618
1073	19.4	9.5	2.5	chrX	70323575	70323810	(85717085)	C	L1ME2z	LINE/L1	(3)	6441	6181	4459490
45	0.0	0.0	0.0	chrX	70323811	70323851	(85717044)	+	(TATT)n	Simple_repeat	1	41	(0)	4459491
2046	11.4	3.5	0.0	chrX	70323852	70324123	(85716772)	C	AluSx	SINE/Alu	(30)	282	1	4459492
17	5.3	12.5	0.0	chrX	71068423	71068462	(84972433)	+	(GCAC)n	Simple_repeat	1	45	(0)	4460744
32	4.0	5.6	1.8	chrX	71910774	71910827	(84130068)	+	(AGG)n	Simple_repeat	1	57	(0)	4462355
959	22.0	0.4	5.3	chrX	72180590	72180834	(83860061)	C	MIR	SINE/MIR	(26)	236	4	4462843
269	31.9	4.3	1.5	chrX	72181005	72181141	(83859754)	C	L1ME4c	LINE/L1	(221)	609	469	4462844
18	4.0	0.0	0.0	chrX	73824970	73824995	(82215900)	+	(ATTC)n	Simple_repeat	1	26	(0)	4464789
226	19.2	3.7	1.9	chrX	73825003	73825055	(82215840)	C	MIRc	SINE/MIR	(8)	260	207	4464790
198	30.9	0.0	0.0	chrX	73825101	73825142	(82215753)	+	L2b	LINE/L2	3305	3346	(29)	4464791
1930	17.4	0.3	1.0	chrX	73913930	73914065	(82126830)	+	AluJb	SINE/Alu	1	136	(176)	4464907
1258	8.3	0.0	6.1	chrX	73943446	73943625	(82097270)	C	AluSx	SINE/Alu	(9)	303	135	4464968
365	27.2	14.4	3.9	chrX	73943786	73943965	(82096930)	+	MIRc	SINE/MIR	25	226	(42)	4464969
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
202	37.0	0.0	1.2	chrX	74535525	74535606	(81505289)	C	L2a	LINE/L2	(6)	3420	3340	4465787
16	21.3	2.6	0.0	chrX	85243850	85243887	(70797008)	+	(GC)n	Simple_repeat	1	39	(0)	4476826
43	4.3	0.0	0.0	chrX	85244124	85244171	(70796724)	+	(GGC)n	Simple_repeat	1	48	(0)	4476827
475	28.4	5.5	1.6	chrX	107000621	107000863	(49040032)	+	L1ME4a	LINE/L1	5714	5966	(158)	4503481
2949	5.4	0.3	0.0	chrX	108113562	108113915	(47926980)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4505320
57	0.0	0.0	0.0	chrX	115881342	115881392	(40159503)	+	(TTTA)n	Simple_repeat	1	51	(0)	4516120
52	0.0	0.0	0.0	chrX	115884351	115884397	(40156498)	+	(TTTA)n	Simple_repeat	1	47	(0)	4516123
575	28.3	7.5	1.7	chrX	118350182	118350367	(37690528)	C	MIR3	SINE/MIR	(10)	198	4	4519025
945	24.5	0.8	2.9	chrX	118660138	118660381	(37380514)	C	Charlie10b	DNA/hAT-Charlie	(2)	240	2	4519658
517	27.1	2.8	3.7	chrX	118729374	118729558	(37311337)	+	MIR3	SINE/MIR	5	187	(21)	4519786
40	0.0	0.0	0.0	chrX	120311810	120311843	(35729052)	+	(AC)n	Simple_repeat	1	34	(0)	4522746
486	25.6	2.4	0.0	chrX	120311996	120312116	(35728779)	+	CR1_Mam	LINE/CR1	2016	2139	(65)	4522747
727	19.3	1.7	8.3	chrX	123784868	123784981	(32255914)	+	L1MEg	LINE/L1	5393	5504	(676)	4527320
44	2.0	0.0	0.0	chrX	123960603	123960652	(32080243)	+	(A)n	Simple_repeat	1	50	(0)	4527819
837	5.3	0.0	1.8	chrX	132833767	132833880	(23207015)	C	L1PA3	LINE/L1	(0)	6155	6044	4539986
960	32.1	7.6	4.0	chrX	132843568	132844037	(23196858)	+	L3	LINE/CR1	3434	3921	(178)	4539999
635	24.3	2.2	5.3	chrX	134021214	134021400	(22019495)	C	MER103C	DNA/hAT-Charlie	(5)	292	112	4541974
7560	18.7	4.2	0.5	chrX	135340709	135342184	(20698711)	+	ERVL-B4-int	LTR/ERVL	1247	2779	(2935)	4544199
1401	20.5	9.2	2.2	chrX	136131052	136131379	(19909516)	+	Tigger7	DNA/TcMar-Tigger	1	329	(10)	4545464
2008	15.9	0.0	0.0	chrX	136131382	136131690	(19909205)	C	LOR1b	LTR/ERV1	(0)	461	153	4545465
286	25.4	7.8	5.3	chrX	136881009	136881158	(19159737)	C	MIR	SINE/MIR	(3)	259	106	4546773
13	25.1	0.0	2.3	chrX	149505177	149505220	(6535675)	+	(GCCGCA)n	Simple_repeat	1	44	(0)	4564708
2951	11.6	9.0	3.0	chrX	149719916	149720386	(6320509)	+	LTR22C0	LTR/ERVK	1	502	(0)	4564966
12	28.2	0.0	2.2	chrX	149938720	149938778	(6102117)	+	GA-rich	Low_complexity	1	57	(0)	4565177
1616	29.5	9.2	5.0	chrX	150184298	150185164	(5855731)	+	L1MEi	LINE/L1	5	911	(1301)	4565528
252	29.5	2.1	10.9	chrX	150200863	150201018	(5839877)	+	MER5A	DNA/hAT-Charlie	34	175	(14)	4565551
268	22.0	10.8	3.2	chrX	150201020	150201113	(5839782)	C	MIR3	SINE/MIR	(91)	117	16	4565552
2227	11.7	0.7	1.0	chrX	153711626	153711934	(2328961)	+	AluSz6	SINE/Alu	5	312	(0)	4570634
15	29.4	1.6	0.0	chrX	153711935	153711984	(2328911)	+	A-rich	Low_complexity	13	63	(0)	4570635
1776	14.6	6.6	0.0	chrX	153712140	153712407	(2328488)	+	AluJo	SINE/Alu	1	287	(25)	4570636
453	36.4	1.1	0.6	chrX	153793400	153793573	(2247322)	C	MIR3	SINE/MIR	(1)	207	33	4570742
2034	22.9	7.4	4.9	chrX	155145698	155146417	(894478)	C	ERV3-16A3_I-int	LTR/ERVL	(2254)	2972	2233	4572968
10532	19.2	3.5	2.3	chrX	155819140	155820615	(220280)	+	L1MA3	LINE/L1	16	2199	(5366)	4573802