14	18.9	1.5	9.1	chr1	1272646	1272710	(247683712)	+	(CCTG)n	Simple_repeat	1	66	(0)	1542
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
181	27.3	5.2	0.0	chr1	6220302	6220356	(242736066)	C	L2b	LINE/L2	(2)	3373	3316	7855
467	20.2	12.2	0.8	chr1	10591480	10591609	(238364813)	C	L1ME4b	LINE/L1	(3)	889	743	16109
49	0.0	0.0	0.0	chr1	10591636	10591677	(238364745)	+	(TG)n	Simple_repeat	1	42	(0)	16110
68	23.8	1.8	6.6	chr1	11272907	11273190	(237683232)	+	(CCGCC)n	Simple_repeat	1	289	(0)	17351
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
212	27.1	1.7	3.3	chr1	15800802	15800862	(233155560)	C	MIRb	SINE/MIR	(78)	190	131	26068
362	25.8	21.5	2.0	chr1	15800857	15801248	(233155174)	C	L2b	LINE/L2	(2007)	1412	924	26066
644	22.4	4.3	5.6	chr1	24070728	24070940	(224885482)	C	MER20B	DNA/hAT-Charlie	(479)	304	95	44067
311	25.7	4.6	6.5	chr1	27611356	27611539	(221344883)	+	L2c	LINE/L2	3215	3419	(7)	52121
25	20.4	3.9	2.5	chr1	31413836	31413913	(217542509)	+	(GTCC)n	Simple_repeat	1	81	(0)	60630
465	27.5	16.3	0.9	chr1	36398030	36398345	(212558077)	C	L2a	LINE/L2	(1)	3425	3052	70782
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
234	23.1	1.0	11.9	chr1	45339770	45339887	(203616535)	+	L2c	LINE/L2	3059	3163	(212)	87767
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
775	26.3	1.2	3.8	chr1	47751019	47751234	(201205188)	C	MIRb	SINE/MIR	(0)	230	20	92239
362	23.9	1.1	0.0	chr1	47751338	47751429	(201204993)	+	LTR91	LTR/ERVL	50	142	(57)	92240
18	4.8	0.0	0.0	chr1	85297911	85297932	(163658490)	+	(AC)n	Simple_repeat	1	22	(0)	153966
23428	11.7	2.9	1.5	chr1	106344792	106348488	(142607934)	C	MER61-int	LTR/ERV1	(1)	5216	1655	183928
901	29.6	7.4	1.3	chr1	108170076	108170609	(140785813)	C	L1MEd	LINE/L1	(3084)	3062	2494	186455
18	20.7	3.4	3.3	chr1	108170663	108170721	(140785701)	+	(TAT)n	Simple_repeat	1	61	(0)	186456
2169	9.9	0.0	0.3	chr1	109241040	109241322	(139715100)	+	AluSx	SINE/Alu	22	303	(9)	188289
2153	20.2	8.0	9.0	chr1	114047289	114047636	(134908786)	C	L1MC4	LINE/L1	(1208)	6834	6462	195992
2177	9.9	0.0	1.7	chr1	116138684	116138985	(132817437)	+	AluSx1	SINE/Alu	1	297	(15)	199214
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
1093	25.1	11.7	3.0	chr1	117537533	117537997	(131418425)	C	L2c	LINE/L2	(1528)	1891	1381	201443
273	33.9	0.9	0.0	chr1	144546971	144547085	(104409337)	C	Charlie4a	DNA/hAT-Charlie	(8)	500	385	209592
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
666	0.0	0.0	0.0	chr1	146037061	146037132	(102919290)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	211991
637	2.8	0.0	0.0	chr1	146038044	146038115	(102918307)	+	tRNA-His-CAY_	tRNA	1	72	(3)	211993
1391	13.4	6.5	6.5	chr1	146038261	146038383	(102918039)	+	AluJb	SINE/Alu	1	125	(187)	211994
674	0.0	0.0	0.0	chr1	146039401	146039474	(102916948)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	211996
2118	6.1	9.8	0.0	chr1	146039617	146039893	(102916529)	+	AluSp	SINE/Alu	1	307	(6)	211997
266	33.9	0.9	0.0	chr1	146386900	146387014	(102569408)	+	Charlie4a	DNA/hAT-Charlie	385	500	(8)	212559
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
225	25.8	2.1	4.1	chr1	150269399	150269495	(98686927)	+	L3b	LINE/CR1	4968	5062	(170)	218650
15	17.4	2.9	0.0	chr1	150321483	150321516	(98634906)	+	(GCG)n	Simple_repeat	1	35	(0)	218779
15	12.9	5.0	7.9	chr1	150926373	150926432	(98029990)	+	(CTTCCC)n	Simple_repeat	1	63	(0)	220139
16	23.2	0.0	2.1	chr1	151048681	151048727	(97907695)	+	(CACCAC)n	Simple_repeat	1	47	(0)	220394
668	1.4	0.0	0.0	chr1	153671250	153671323	(95285099)	+	tRNA-Met-i	tRNA	1	74	(1)	224506
26	22.2	3.8	1.2	chr1	153775501	153775580	(95180842)	+	(GCT)n	Simple_repeat	1	83	(0)	224742
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
19	23.8	0.0	0.0	chr1	156728593	156728641	(92227781)	+	(GCG)n	Simple_repeat	1	49	(0)	230643
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
12	5.5	0.0	0.0	chr1	177984230	177984248	(70972174)	+	(TGC)n	Simple_repeat	1	19	(0)	262388
34	0.0	0.0	2.9	chr1	186375989	186376022	(62580400)	+	(GT)n	Simple_repeat	1	34	(0)	275491
13	13.7	0.0	0.0	chr1	193060087	193060111	(55896311)	+	(CTC)n	Simple_repeat	1	25	(0)	284288
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
740	27.2	6.7	0.3	chr1	202667108	202667438	(46288984)	C	LTR33A	LTR/ERVL	(84)	436	47	298281
56	0.0	0.0	0.0	chr1	202667467	202667514	(46288908)	+	(GT)n	Simple_repeat	1	48	(0)	298282
12	28.1	1.9	1.9	chr1	202808521	202808573	(46147849)	+	(CCCGC)n	Simple_repeat	1	54	(0)	298520
773	21.1	2.5	1.9	chr1	202852163	202852318	(46104104)	+	FAM	SINE/Alu	1	157	(28)	298621
2460	9.1	0.0	0.0	chr1	204506171	204506479	(44449943)	+	AluSc	SINE/Alu	1	309	(0)	301656
656	1.4	0.0	0.0	chr1	204506527	204506599	(44449823)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	301657
333	28.6	17.8	2.8	chr1	206908937	206909188	(42047234)	C	L3	LINE/CR1	(55)	4044	3747	305898
1222	27.1	3.9	4.8	chr1	207152495	207152811	(41803611)	C	L1M1	LINE/L1	(4863)	2633	2311	306272
4401	15.7	6.2	0.7	chr1	207893752	207894562	(41061860)	+	L1MB3	LINE/L1	5324	6181	(2)	307289
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
805	12.5	0.8	2.5	chr1	224356517	224356636	(24599786)	+	FRAM	SINE/Alu	38	155	(21)	332413
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
257	27.5	11.8	7.8	chr1	236794837	236794990	(12161432)	C	MIRc	SINE/MIR	(24)	244	84	352267
42460	7.0	2.8	2.4	chr1	244453502	244459080	(4497342)	+	HUERS-P1-int	LTR/ERV1	1	5604	(659)	364212
15	16.7	2.4	2.3	chr1	246566454	246566495	(2389927)	+	(CCGCGAG)n	Simple_repeat	1	43	(0)	367694
15	5.6	0.0	0.0	chr10	1049464	1049482	(132747940)	+	(C)n	Simple_repeat	1	19	(0)	372220
1995	13.1	1.4	0.0	chr10	1049662	1049952	(132747470)	C	AluSp	SINE/Alu	(18)	295	1	372221
2534	15.6	1.8	0.3	chr10	6283636	6284061	(127513361)	+	LTR45B	LTR/ERV1	3	485	(54)	379247
277	25.4	10.0	3.8	chr10	9178412	9178542	(124618880)	C	LTR16D2	LTR/ERVL	(0)	572	433	383908
1451	7.9	0.0	0.0	chr10	27154563	27154739	(106642683)	C	AluSx1	SINE/Alu	(5)	307	131	412952
2320	14.7	2.2	0.6	chr10	33134505	33134931	(100662491)	+	LTR45B	LTR/ERV1	3	446	(54)	422828
321	23.3	15.3	0.0	chr10	37431080	37431212	(96366210)	C	LTR79	LTR/ERVL	(368)	159	3	429511
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
225	26.9	8.0	0.9	chr10	49426944	49427048	(84370374)	C	L1MC4	LINE/L1	(396)	7646	7534	441868
271	29.3	2.0	0.0	chr10	49427054	49427152	(84370270)	C	L1ME4b	LINE/L1	(211)	681	581	441869
474	27.1	10.3	2.7	chr10	64041134	64041357	(69756065)	C	L1M3e	LINE/L1	(5425)	2140	1898	462798
226	18.8	0.0	0.0	chr10	64041385	64041432	(69755990)	C	L1M3e	LINE/L1	(4635)	1930	1883	462798
462	29.0	1.6	0.8	chr10	64041466	64041673	(69755749)	C	L1M3e	LINE/L1	(6676)	813	653	462798
16	18.9	0.0	0.0	chr10	68527338	68527373	(65270049)	+	(GCCGCC)n	Simple_repeat	1	36	(0)	469455
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
1547	20.5	2.8	14.5	chr10	76016964	76017487	(57779935)	+	MLT1C	LTR/ERVL-MaLR	4	464	(3)	483942
16	0.0	0.0	0.0	chr10	78545874	78545890	(55251532)	+	(T)n	Simple_repeat	1	17	(0)	488001
391	25.5	2.6	0.9	chr10	78545891	78546001	(55251421)	+	LTR91	LTR/ERVL	43	155	(44)	488002
56	16.1	6.0	4.9	chr10	92076756	92076923	(41720499)	+	GA-rich	Low_complexity	1	169	(0)	508349
12	10.4	6.1	2.9	chr10	92848751	92848783	(40948639)	+	G-rich	Low_complexity	1	35	(0)	510023
356	29.0	11.8	5.6	chr10	93063642	93063838	(40733584)	C	MIRb	SINE/MIR	(29)	239	29	510384
441	30.4	7.3	1.0	chr10	93064007	93064199	(40733223)	+	MIRc	SINE/MIR	11	216	(52)	510385
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
1458	14.8	7.1	0.5	chr10	96118640	96118916	(37678506)	+	LTR45B	LTR/ERV1	3	338	(151)	515431
15	4.5	0.0	4.0	chr10	97849238	97849262	(35948160)	+	(GTG)n	Simple_repeat	1	25	(0)	518874
1982	13.1	2.4	0.7	chr10	100229875	100230165	(33567257)	C	AluJb	SINE/Alu	(15)	297	2	522981
479	24.1	5.0	0.8	chr10	119166075	119166208	(14631214)	C	MER45A	DNA/hAT-Tip100	(0)	178	39	553370
359	29.4	13.9	0.6	chr10	119178325	119178492	(14618930)	C	MIRb	SINE/MIR	(20)	248	55	553394
12	22.3	8.8	0.0	chr10	121928210	121928266	(11869156)	+	G-rich	Low_complexity	1	62	(0)	557960
523	27.1	13.2	1.0	chr10	124374440	124374644	(9422778)	C	MIRb	SINE/MIR	(9)	259	26	561792
374	26.0	3.7	1.9	chr10	124374652	124374757	(9422665)	+	LTR91	LTR/ERVL	27	134	(65)	561793
24	36.0	3.9	0.0	chr10	129036873	129036999	(4760423)	+	(TA)n	Simple_repeat	1	132	(0)	568074
2146	11.1	7.7	0.6	chr10	133388147	133388473	(408949)	C	L1PA13	LINE/L1	(7)	6156	5805	572475
343	13.3	11.8	0.0	chr11	207565	207624	(134878998)	C	AluSg4	SINE/Alu	(43)	267	200	573079
296	15.2	16.5	0.0	chr11	207580	207645	(134878977)	+	SVA_F	Retroposon/SVA	344	422	(953)	573080
237	23.4	25.6	1.3	chr11	236641	236796	(134849826)	C	MIRb	SINE/MIR	(8)	260	54	573122
19	23.2	2.4	5.8	chr11	576493	576576	(134510046)	+	(CGG)n	Simple_repeat	1	86	(0)	573583
228	18.5	7.1	7.1	chr11	20066827	20066896	(115019726)	C	LTR79	LTR/ERVL	(384)	143	74	603298
181	19.4	7.5	7.5	chr11	43880537	43880603	(91206019)	C	L3	LINE/CR1	(110)	3989	3923	639137
532	33.2	5.6	1.9	chr11	46249524	46249848	(88836774)	+	MLT1J	LTR/ERVL-MaLR	1	338	(174)	643597
31	0.0	3.0	0.0	chr11	47408554	47408586	(87678036)	+	(GGCCGGGC)n	Simple_repeat	1	34	(0)	645844
22	0.0	0.0	0.0	chr11	57667366	57667389	(77419233)	+	(A)n	Simple_repeat	1	24	(0)	654240
11	27.6	0.0	0.0	chr11	61429967	61430005	(73656617)	+	(CCGCCCC)n	Simple_repeat	1	39	(0)	660145
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1936	8.1	6.5	0.0	chr11	62653500	62653758	(72432864)	+	AluSx	SINE/Alu	1	277	(35)	662482
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
331	34.7	3.4	3.4	chr11	64225936	64226114	(70860508)	C	MIR3	SINE/MIR	(1)	207	29	665220
33	0.0	0.0	0.0	chr11	64271061	64271088	(70815534)	+	(AC)n	Simple_repeat	1	28	(0)	665283
31	0.0	0.0	0.0	chr11	64271137	64271163	(70815459)	+	(CA)n	Simple_repeat	1	27	(0)	665284
48	0.0	0.0	0.0	chr11	64271208	64271248	(70815374)	+	(CA)n	Simple_repeat	1	41	(0)	665284
46	0.0	0.0	0.0	chr11	64271297	64271335	(70815287)	+	(CA)n	Simple_repeat	1	39	(0)	665284
29	0.0	0.0	0.0	chr11	64271382	64271406	(70815216)	+	(CA)n	Simple_repeat	1	25	(0)	665284
274	24.0	5.0	0.0	chr11	65418923	65419018	(69667604)	C	L2a	LINE/L2	(262)	3164	3064	667508
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
1991	12.7	0.0	2.4	chr11	65893517	65893807	(69192815)	+	AluSz6	SINE/Alu	9	292	(20)	668362
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
2198	9.0	1.0	0.3	chr11	68459681	68459969	(66626653)	+	AluSq2	SINE/Alu	1	291	(22)	673465
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
13	8.2	3.9	0.0	chr11	68460278	68460303	(66626319)	+	(CCCCG)n	Simple_repeat	1	27	(0)	673467
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
18	31.1	1.8	0.0	chr11	74988468	74988524	(60098098)	+	(AT)n	Simple_repeat	1	58	(0)	685135
247	36.7	8.2	1.2	chr11	77766855	77767025	(57319597)	C	L2b	LINE/L2	(653)	2766	2583	690544
186	35.7	4.2	4.2	chr11	77767003	77767122	(57319500)	+	MIRc	SINE/MIR	29	148	(120)	690551
182	24.8	25.0	0.7	chr11	78575184	78575337	(56511285)	C	L2c	LINE/L2	(58)	3329	3126	692291
341	28.8	14.6	0.9	chr11	86301816	86302017	(48784605)	+	MIRb	SINE/MIR	16	257	(11)	705331
1123	21.6	28.4	1.6	chr11	124707745	124708319	(10378303)	+	LTR50	LTR/ERVL	3	792	(3)	763449
29	0.0	0.0	0.0	chr12	1594157	1594183	(131681126)	+	(GCC)n	Simple_repeat	1	27	(0)	780919
12	16.4	5.9	0.0	chr12	3873171	3873204	(129402105)	+	(CCCCG)n	Simple_repeat	1	36	(0)	784521
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
5159	24.1	3.9	2.1	chr12	19401833	19403682	(113871627)	C	L1PBb	LINE/L1	(5220)	1643	660	808108
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
32	0.0	0.0	0.0	chr12	34022251	34022280	(99253029)	+	(T)n	Simple_repeat	1	30	(0)	829732
20	16.4	0.0	5.7	chr12	51391449	51391501	(81883808)	+	GA-rich	Low_complexity	1	53	(0)	851261
18216	6.9	0.1	1.4	chr12	52116007	52118404	(81156905)	C	HERVE-int	LTR/ERV1	(2648)	5165	2798	852456
2021	8.3	1.4	0.0	chr12	52953838	52954139	(80321170)	C	AluSg	SINE/Alu	(0)	310	1	853741
984	20.7	0.0	0.0	chr12	52954186	52954354	(80320955)	+	AluJr	SINE/Alu	124	292	(20)	853742
1066	9.9	0.0	0.0	chr12	52954358	52954499	(80320810)	+	AluY	SINE/Alu	1	142	(169)	853743
33	16.8	5.0	0.0	chr12	53066320	53066399	(80208910)	+	(CTTCCT)n	Simple_repeat	1	84	(0)	854003
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
2293	11.0	0.0	0.0	chr12	57487567	57487874	(75787435)	+	AluSx	SINE/Alu	1	308	(4)	861402
14	7.0	2.9	5.7	chr12	57764891	57764924	(75510385)	+	(CTGCCT)n	Simple_repeat	1	35	(0)	861794
13	25.7	3.5	1.7	chr12	57845421	57845477	(75429832)	+	(GCCTCC)n	Simple_repeat	1	59	(0)	861914
765	29.6	11.9	3.2	chr12	71594021	71594494	(61680815)	C	LTR79	LTR/ERVL	(3)	524	4	882543
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
204	28.4	5.0	8.7	chr12	95943038	95943141	(37332168)	+	MIRb	SINE/MIR	71	170	(98)	918160
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
288	30.0	1.0	3.9	chr12	109713380	109713483	(23561826)	+	MIRb	SINE/MIR	157	257	(11)	943152
205	34.8	1.4	0.0	chr12	110048838	110048906	(23226403)	C	MIRb	SINE/MIR	(62)	206	137	943867
2005	12.2	3.3	0.3	chr12	112409729	112410024	(20865285)	+	AluSx	SINE/Alu	1	305	(7)	949133
513	27.6	6.6	2.0	chr12	115872762	115872967	(17402342)	C	MIRb	SINE/MIR	(25)	243	20	956964
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
30	19.5	2.8	1.4	chr12	117969563	117969652	(15305657)	+	(GT)n	Simple_repeat	1	91	(0)	961516
380	20.8	0.0	0.0	chr12	119503742	119503813	(13771496)	C	MamTip3	DNA/hAT-Tip100	(339)	161	90	964938
971	24.0	2.2	0.0	chr12	120247845	120248069	(13027240)	+	L1MEc	LINE/L1	2489	2718	(3601)	966514
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
296	23.5	13.4	0.0	chr12	121016663	121016787	(12258522)	C	MIR3	SINE/MIR	(23)	185	40	968381
19	16.8	2.0	3.9	chr12	121352690	121352740	(11922569)	+	(GTT)n	Simple_repeat	1	52	(0)	969185
835	11.3	6.8	0.8	chr12	122266701	122266824	(11008485)	+	FLAM_C	SINE/Alu	1	132	(11)	971438
1859	13.4	5.2	0.7	chr12	122501193	122501483	(10773826)	+	AluJr	SINE/Alu	1	305	(7)	972005
572	25.8	0.7	1.2	chr12	122974375	122974556	(10300753)	+	MIR	SINE/MIR	29	204	(26)	973092
181	30.2	5.7	7.2	chr13	19586759	19586883	(94777445)	C	L2b	LINE/L2	(87)	3288	3166	992655
153	25.4	2.0	4.1	chr13	20391058	20391610	(93972718)	+	G-rich	Low_complexity	1	564	(0)	994196
426	31.7	11.0	1.6	chr13	28658712	28658900	(85705428)	+	MIRc	SINE/MIR	58	266	(2)	1007119
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
1645	14.2	10.6	1.3	chr13	89163139	89163445	(25200883)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1091249
3017	23.7	2.0	4.5	chr13	89163446	89163902	(25200426)	+	L1MB8	LINE/L1	5651	6097	(81)	1091247
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
624	2.7	0.0	0.0	chr14	20613790	20613862	(86429856)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	1128344
267	10.2	0.0	24.4	chr14	20630432	20630509	(86413209)	C	tRNA-Tyr-TAC	tRNA	(15)	61	3	1128375
563	0.0	0.0	18.0	chr14	20683273	20683361	(86360357)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	1128459
663	1.4	0.0	0.0	chr14	22929701	22929773	(84113945)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	1131978
18	3.2	5.9	2.8	chr14	24443018	24443051	(82600667)	+	(AAACC)n	Simple_repeat	1	36	(0)	1134267
520	30.9	8.6	2.1	chr14	30160566	30160849	(76882869)	C	LTR79	LTR/ERVL	(215)	312	9	1141441
18	16.3	0.0	0.0	chr14	30622341	30622376	(76421342)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	1142089
16	19.5	0.0	7.3	chr14	34539791	34539845	(72503873)	+	(GGCGG)n	Simple_repeat	1	55	(0)	1148042
2466	5.9	1.3	0.3	chr14	34539860	34540162	(72503556)	C	AluSp	SINE/Alu	(7)	306	1	1148043
2287	5.9	4.0	0.0	chr14	39170566	39170853	(67872865)	+	AluSp	SINE/Alu	3	302	(11)	1155280
16	16.9	0.0	0.0	chr14	49892575	49892601	(57151117)	+	A-rich	Low_complexity	1	27	(0)	1168853
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
18	14.0	3.1	0.0	chr14	59244706	59244737	(47798981)	+	(TG)n	Simple_repeat	1	33	(0)	1183477
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
12	17.0	2.9	2.8	chr14	60724447	60724481	(46319237)	+	(CCTCC)n	Simple_repeat	1	36	(0)	1185460
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
2461	5.4	0.3	0.3	chr14	64539682	64539978	(42503740)	C	AluSc	SINE/Alu	(12)	297	1	1191465
17	31.6	0.0	1.5	chr14	65102710	65102725	(41940993)	+	(GGCGC)n	Simple_repeat	1	29	(37)	1192409
197	35.7	2.8	6.0	chr14	68393336	68393517	(38650201)	+	AmnSINE1	SINE/5S-Deu-L2	335	510	(65)	1197640
816	26.3	0.5	3.5	chr14	70893288	70893488	(36150230)	+	MER20	DNA/hAT-Charlie	24	218	(1)	1201936
20	27.5	0.0	3.0	chr14	92748493	92748559	(14295159)	+	(GGC)n	Simple_repeat	1	67	(0)	1238154
371	24.0	4.6	1.9	chr14	99026644	99026749	(8016969)	C	LTR91	LTR/ERVL	(40)	159	51	1249368
270	21.5	3.6	14.0	chr14	99134097	99134253	(7909465)	C	LTR91	LTR/ERVL	(9)	190	51	1249562
414	24.3	9.1	9.1	chr14	99143828	99143895	(7899823)	C	MER5A	DNA/hAT-Charlie	(113)	76	2	1249576
297	21.3	7.7	5.3	chr14	99143983	99144096	(7899622)	+	LTR91	LTR/ERVL	46	162	(37)	1249578
246	28.7	1.8	6.2	chr14	100156174	100156330	(6887388)	+	MIR3	SINE/MIR	24	173	(35)	1251290
349	30.6	9.3	1.6	chr14	100156455	100156643	(6887075)	C	MIR	SINE/MIR	(49)	213	9	1251291
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
329	29.7	10.3	1.3	chr14	100586617	100586766	(6456952)	+	MIRb	SINE/MIR	87	251	(17)	1252097
256	27.4	4.5	0.0	chr14	102087766	102087849	(4955869)	C	CR1_Mam	LINE/CR1	(52)	2152	2065	1254196
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
16	0.0	0.0	0.0	chr14	102317173	102317189	(4726529)	+	(T)n	Simple_repeat	1	17	(0)	1254659
12	26.4	3.8	4.9	chr14	104933598	104933676	(2110042)	+	(GGACAGG)n	Simple_repeat	1	82	(0)	1259013
12	17.6	0.0	0.0	chr15	31361908	31361934	(70629255)	+	(CTTC)n	Simple_repeat	1	27	(0)	1278493
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
15	19.7	4.2	2.0	chr15	38453931	38453978	(63537211)	+	(TTA)n	Simple_repeat	1	50	(0)	1288351
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
479	29.3	6.0	2.6	chr15	50415912	50416104	(51575085)	+	LTR79	LTR/ERVL	5	204	(323)	1307727
13	20.2	4.3	2.0	chr15	50765626	50765672	(51225517)	+	(CCGGA)n	Simple_repeat	1	49	(0)	1308472
12	15.7	2.6	5.0	chr15	50908243	50908281	(51082908)	+	(CGCCGG)n	Simple_repeat	1	40	(0)	1308764
12	23.3	3.7	3.6	chr15	64163069	64163122	(37828067)	+	G-rich	Low_complexity	1	56	(0)	1329876
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
545	22.3	4.0	4.0	chr15	65304098	65304270	(36686919)	C	L1ME3E	LINE/L1	(76)	6166	5994	1332344
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
29	16.2	1.3	5.2	chr15	67542696	67542771	(34448418)	+	(CGC)n	Simple_repeat	1	77	(0)	1336780
525	25.7	5.3	2.0	chr15	74460877	74461023	(27530166)	C	MIRb	SINE/MIR	(55)	213	62	1348854
1748	15.2	4.4	0.0	chr15	75903475	75903756	(26087433)	+	AluJb	SINE/Alu	2	296	(16)	1351719
181	24.6	8.8	4.0	chr15	80990145	80990220	(21000969)	+	MIR3	SINE/MIR	108	187	(21)	1360491
939	25.1	13.3	6.2	chr15	81633730	81634196	(20356993)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1361577
333	31.4	12.4	1.2	chr15	81885568	81885738	(20105451)	+	MIR	SINE/MIR	23	215	(47)	1361964
186	35.9	0.0	1.9	chr15	81885762	81885815	(20105374)	+	MIRb	SINE/MIR	202	254	(14)	1361965
626	22.0	9.7	0.0	chr15	83106940	83107098	(18884091)	C	MIR	SINE/MIR	(52)	210	35	1364071
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
861	21.4	8.6	0.5	chr15	92804313	92804505	(9186684)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	1380491
13	15.0	3.3	0.0	chr15	96053824	96053853	(5937336)	+	GA-rich	Low_complexity	1	31	(0)	1385305
1352	26.4	12.6	2.8	chr15	98745757	98746336	(3244853)	+	L1ME4b	LINE/L1	238	882	(10)	1389113
15	16.8	0.0	2.8	chr15	99015203	99015238	(2975951)	+	(GCCTCG)n	Simple_repeat	1	36	(0)	1389443
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
50	17.7	2.5	7.2	chr16	1493590	1493608	(88844737)	+	G-rich	Low_complexity	1	24	(131)	1396009
22	8.0	0.0	6.5	chr16	1493609	1493654	(88844691)	+	(GGGTCGG)n	Simple_repeat	1	46	(0)	1396010
17	13.7	0.0	0.0	chr16	1773265	1773296	(88565049)	+	(GCCGGG)n	Simple_repeat	1	32	(0)	1396373
27	18.1	8.6	3.6	chr16	2155886	2155938	(88182407)	+	G-rich	Low_complexity	1	50	(0)	1396968
18	0.0	0.0	6.7	chr16	3106652	3106681	(87231664)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1398512
2421	6.3	1.0	0.3	chr16	3263367	3263666	(87074679)	C	AluSx4	SINE/Alu	(8)	302	1	1398853
189	22.0	0.0	3.9	chr16	4271706	4271757	(86066588)	+	AmnSINE1	SINE/5S-Deu-L2	76	125	(450)	1400801
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
19	17.8	0.0	4.2	chr16	4795954	4796001	(85542344)	+	(TGC)n	Simple_repeat	1	48	(0)	1401905
12	19.3	0.0	5.1	chr16	4796090	4796128	(85542217)	+	G-rich	Low_complexity	1	39	(0)	1401906
15	18.3	0.0	2.6	chr16	8543458	8543496	(81794849)	+	(TGCACCA)n	Simple_repeat	1	39	(0)	1409240
489	30.6	7.2	2.7	chr16	8543497	8543836	(81794509)	+	L2c	LINE/L2	3025	3375	(0)	1409241
13	33.0	1.7	0.0	chr16	10944605	10944664	(79393681)	+	(CCG)n	Simple_repeat	1	61	(0)	1414616
235	20.2	28.8	0.0	chr16	12803339	12803442	(77534903)	C	MIR	SINE/MIR	(114)	148	3	1418652
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
14	9.3	2.5	7.3	chr16	15056033	15056072	(75282273)	+	(GCCGCCC)n	Simple_repeat	1	41	(0)	1423502
310	29.2	4.6	8.3	chr16	19153993	19154149	(71184196)	+	MLT1K	LTR/ERVL-MaLR	69	219	(376)	1432839
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
759	0.0	0.0	0.0	chr16	22195710	22195792	(68142553)	C	tRNA-Leu-CTA	tRNA	(2)	83	1	1439502
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
1245	18.0	0.9	1.8	chr16	25135332	25135557	(65202788)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1446286
391	28.4	6.1	3.7	chr16	25135708	25135808	(65202537)	+	LTR84b	LTR/ERVL	513	619	(142)	1446284
26	0.0	0.0	0.0	chr16	28863894	28863918	(61474427)	+	(GCC)n	Simple_repeat	1	25	(0)	1454616
16	19.6	0.0	5.8	chr16	30526709	30526760	(59811585)	+	(GCCCCC)n	Simple_repeat	1	52	(0)	1458285
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
15	20.6	3.3	4.8	chr16	46884349	46884409	(43453936)	+	G-rich	Low_complexity	1	63	(0)	1466256
1743	29.6	13.8	2.1	chr16	47719053	47719769	(42618576)	+	L2a	LINE/L2	1632	2461	(958)	1467549
3253	13.5	2.7	0.6	chr16	47719770	47720246	(42618099)	+	LTR45B	LTR/ERV1	3	489	(0)	1467550
2344	10.5	0.3	0.6	chr16	53094626	53094938	(37243407)	C	AluSx	SINE/Alu	(0)	312	1	1477217
3049	12.7	1.2	2.2	chr16	66161950	66162415	(24175930)	+	LTR45B	LTR/ERV1	5	519	(20)	1499209
15	8.9	0.0	0.0	chr16	66934335	66934358	(23403987)	+	(GCC)n	Simple_repeat	1	24	(0)	1500709
12	15.3	5.3	2.5	chr16	68234154	68234191	(22104154)	+	(GGCA)n	Simple_repeat	1	40	(0)	1503207
433	28.1	4.0	1.2	chr16	68738684	68738852	(21599493)	C	MIRc	SINE/MIR	(46)	222	49	1504214
24	19.8	0.0	0.0	chr16	70454251	70454296	(19884049)	+	A-rich	Low_complexity	1	46	(0)	1508029
39	2.3	2.3	0.0	chr16	71809207	71809250	(18529095)	+	(GGGGGTAG)n	Simple_repeat	1	45	(0)	1510412
573	21.1	8.4	7.0	chr16	72008276	72008395	(18329950)	+	ORSL	DNA/hAT-Tip100	69	202	(73)	1510820
524	27.1	5.3	12.8	chr16	81180643	81180866	(9157479)	C	LTR16A2	LTR/ERVL	(64)	431	215	1526689
1816	14.8	10.7	7.4	chr16	81181317	81181500	(9156845)	+	MSTB1	LTR/ERVL-MaLR	1	194	(238)	1526692
254	29.5	0.0	1.3	chr16	81746341	81746419	(8591926)	+	L1M6	LINE/L1	440	517	(5979)	1527925
650	24.1	1.8	1.2	chr16	82044647	82044810	(8293535)	C	LTR79	LTR/ERVL	(362)	165	1	1528528
2181	13.6	0.3	1.6	chr16	82044836	82045151	(8293194)	+	AluSx	SINE/Alu	1	312	(0)	1528529
180	28.6	13.3	0.0	chr16	85010976	85011066	(5327279)	C	MIR3	SINE/MIR	(58)	150	46	1534007
18	25.4	1.4	4.2	chr16	85011296	85011366	(5326979)	+	(GGC)n	Simple_repeat	1	72	(0)	1534008
11	18.3	5.0	2.4	chr16	85029617	85029656	(5308689)	+	(TCTCTCC)n	Simple_repeat	1	42	(0)	1534049
451	32.5	7.6	1.4	chr16	85029797	85030005	(5308340)	C	MIRc	SINE/MIR	(29)	239	17	1534050
1659	21.6	16.5	4.2	chr16	86162668	86163117	(4175228)	C	MLT2B1	LTR/ERVL	(0)	520	5	1536161
2171	6.4	0.7	0.7	chr16	87950441	87950735	(2387610)	C	AluSx1	SINE/Alu	(17)	295	1	1539392
181	29.3	0.0	0.0	chr16	89018815	89018855	(1319490)	+	L2b	LINE/L2	3265	3305	(70)	1540707
14	23.1	3.4	3.3	chr16	89093689	89093747	(1244598)	+	(CCACGG)n	Simple_repeat	1	61	(0)	1540793
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
13	0.0	14.3	0.0	chr17	1268404	1268431	(81989010)	+	(CCCG)n	Simple_repeat	1	32	(0)	1546738
1914	27.2	9.1	3.2	chr17	2975257	2975506	(80281935)	+	L1MEi	LINE/L1	2073	2387	(3759)	1550361
533	25.3	20.1	1.9	chr17	2975525	2975946	(80281495)	+	LTR79	LTR/ERVL	10	514	(13)	1550364
590	29.0	8.1	0.5	chr17	3563119	3563312	(79694129)	+	MIRb	SINE/MIR	7	216	(52)	1551268
1913	9.8	1.8	0.0	chr17	4730911	4731186	(78526255)	+	AluSx1	SINE/Alu	15	295	(17)	1553636
244	24.2	4.6	3.1	chr17	5419929	5419992	(77837449)	+	L2	LINE/L2	2380	2444	(975)	1555105
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
210	28.0	8.8	1.1	chr17	5837177	5837270	(77420171)	C	L2a	LINE/L2	(42)	3384	3283	1555896
639	34.3	4.5	3.8	chr17	5837311	5837368	(77420073)	C	LTR16E1	LTR/ERVL	(37)	501	446	1555897
2225	10.7	0.0	2.6	chr17	5837369	5837678	(77419763)	+	AluSx	SINE/Alu	1	302	(10)	1555898
14	26.8	3.7	0.0	chr17	7020145	7020198	(76237243)	+	G-rich	Low_complexity	1	56	(0)	1558092
13	16.3	2.1	6.1	chr17	7239468	7239500	(76017941)	+	(GCC)n	Simple_repeat	1	30	(0)	1558483
28	4.2	0.0	8.6	chr17	7239501	7239558	(76017883)	+	(CCT)n	Simple_repeat	1	58	(0)	1558484
13	16.3	2.1	6.1	chr17	7239559	7239572	(76017869)	+	(GCC)n	Simple_repeat	1	15	(0)	1558485
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
222	20.0	0.0	0.0	chr17	11997717	11997761	(71259680)	C	MIRb	SINE/MIR	(14)	254	210	1567386
334	15.7	0.0	0.0	chr17	15684352	15684402	(67573039)	+	AluYb8	SINE/Alu	258	308	(10)	1573497
2460	7.4	0.7	1.4	chr17	15684442	15684738	(67572703)	C	AluSx1	SINE/Alu	(17)	295	1	1573498
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
12	11.4	10.9	5.6	chr17	18781074	18781137	(64476304)	+	(CTCCGC)n	Simple_repeat	1	71	(0)	1579119
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
1548	25.5	8.9	0.9	chr17	21126195	21126741	(62130700)	C	L1M5	LINE/L1	(854)	5292	4698	1583713
14	29.9	0.0	6.1	chr17	28645063	28645144	(54612297)	+	(CCCGG)n	Simple_repeat	1	82	(0)	1589065
220	29.6	0.0	0.7	chr17	29177036	29177115	(54080326)	+	MIRc	SINE/MIR	61	141	(127)	1590033
18	10.5	0.0	0.0	chr17	29294512	29294543	(53962898)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1590289
17	27.5	0.0	6.0	chr17	31549495	31549577	(51707864)	+	(GCCCCG)n	Simple_repeat	1	83	(0)	1594794
14	18.8	0.0	2.6	chr17	31549549	31549586	(51707855)	+	(CCCCGT)n	Simple_repeat	1	38	(0)	1594795
18	5.7	2.4	7.0	chr17	31549686	31549727	(51707714)	+	(CCGCTT)n	Simple_repeat	1	43	(0)	1594796
13	18.9	2.8	0.0	chr17	31549832	31549867	(51707574)	+	(GCGGAGG)n	Simple_repeat	1	37	(0)	1594797
308	32.3	8.1	6.5	chr17	32298401	32298632	(50958809)	+	MIRc	SINE/MIR	2	237	(31)	1596494
16	23.0	0.0	7.7	chr17	32444481	32444545	(50812896)	+	(CGG)n	Simple_repeat	1	65	(0)	1596845
416	35.9	2.3	0.6	chr17	41521636	41521806	(41735635)	+	MIRb	SINE/MIR	6	179	(89)	1613748
20	28.0	0.0	1.5	chr17	42548091	42548157	(40709284)	+	G-rich	Low_complexity	1	67	(0)	1615867
187	33.1	6.1	6.7	chr17	42773138	42773257	(40484184)	+	MIR1_Amn	SINE/MIR	6	118	(90)	1616344
445	27.0	15.6	7.0	chr17	44015221	44015381	(39242060)	+	MIRb	SINE/MIR	8	179	(89)	1619061
253	28.1	3.0	0.0	chr17	44503775	44503838	(38753603)	+	MIR	SINE/MIR	2	67	(195)	1620073
247	29.6	12.6	0.0	chr17	44503842	44503973	(38753468)	C	L2a	LINE/L2	(61)	3365	3215	1620074
280	30.6	4.8	2.0	chr17	44899223	44899322	(38358119)	+	MIR3	SINE/MIR	101	203	(5)	1620954
12	17.0	2.9	2.8	chr17	46923240	46923274	(36334167)	+	(GCGAG)n	Simple_repeat	1	36	(0)	1625000
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
275	34.1	16.4	6.1	chr17	47831014	47831409	(35426032)	C	L2b	LINE/L2	(0)	3375	2931	1626803
2309	10.0	0.7	0.0	chr17	48101669	48101969	(35155472)	+	AluSx1	SINE/Alu	1	303	(9)	1627296
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
2676	16.0	3.7	0.5	chr17	50493781	50494226	(32763215)	+	MER65C	LTR/ERV1	1	461	(0)	1631904
304	26.5	9.7	1.0	chr17	54901256	54901396	(28356045)	C	MIRc	SINE/MIR	(77)	191	35	1638730
209	26.4	1.9	0.0	chr17	57426593	57426645	(25830796)	C	L2c	LINE/L2	(1)	3386	3333	1643251
503	29.1	3.3	1.1	chr17	57892848	57893024	(25364417)	C	MER117	DNA/hAT-Charlie	(10)	187	7	1644055
14	9.4	8.8	0.0	chr17	57893305	57893338	(25364103)	+	GA-rich	Low_complexity	1	37	(0)	1644056
16	17.2	2.6	0.0	chr17	57956653	57956691	(25300750)	+	(TCTCCTC)n	Simple_repeat	1	40	(0)	1644191
913	24.6	7.8	0.4	chr17	57956796	57957032	(25300409)	C	CR1_Mam	LINE/CR1	(452)	1752	1497	1644192
240	41.8	5.9	1.3	chr17	58387991	58388218	(24869223)	C	MamRTE1	LINE/RTE-BovB	(2798)	1014	776	1644916
3740	15.2	0.8	3.2	chr17	58586680	58587298	(24670143)	+	MER6A	DNA/TcMar-Tigger	2	605	(0)	1645257
2322	10.3	0.7	0.0	chr17	58612920	58613211	(24644230)	+	AluSx1	SINE/Alu	1	294	(18)	1645326
2454	16.7	5.8	1.3	chr17	58740943	58741402	(24516039)	C	Tigger7	DNA/TcMar-Tigger	(2008)	483	2	1645667
2259	11.0	0.0	1.0	chr17	58783710	58784010	(24473431)	C	AluSx1	SINE/Alu	(14)	298	1	1645764
29	0.0	3.2	0.0	chr17	58784011	58784041	(24473400)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1645765
2141	11.0	0.4	0.4	chr17	58784042	58784322	(24473119)	C	AluSz	SINE/Alu	(31)	281	1	1645766
287	34.0	1.4	7.8	chr17	58784323	58784382	(24473059)	+	L3	LINE/CR1	3972	4023	(76)	1645760
2276	15.6	4.8	7.3	chr17	58784397	58784504	(24472937)	C	L1ME3G	LINE/L1	(753)	5393	5330	1645767
2402	8.8	0.0	2.8	chr17	58784505	58784822	(24472619)	C	AluSc	SINE/Alu	(0)	309	1	1645768
2276	13.9	6.1	5.2	chr17	58784823	58785258	(24472183)	C	L1ME3G	LINE/L1	(817)	5329	4866	1645767
1491	20.5	7.8	6.2	chr17	58872711	58873100	(24384341)	C	LTR24	LTR/ERV1	(70)	397	1	1645921
419	32.4	10.5	8.3	chr17	58885397	58886211	(24371230)	C	HAL1	LINE/L1	(1613)	894	60	1645966
2052	17.0	0.3	0.0	chr17	58923004	58923314	(24334127)	+	AluSz6	SINE/Alu	1	312	(0)	1646042
1486	20.5	0.8	0.8	chr17	58923340	58923463	(24333978)	+	AluJr	SINE/Alu	9	131	(181)	1646043
2388	8.0	1.3	1.7	chr17	58923464	58923764	(24333677)	+	AluSx	SINE/Alu	1	300	(12)	1646044
2467	9.7	0.7	0.0	chr17	58945144	58945442	(24311999)	C	AluSx	SINE/Alu	(11)	301	1	1646098
3674	22.6	5.3	3.8	chr17	58945443	58946318	(24311123)	C	MER21C	LTR/ERVL	(39)	899	9	1646097
1652	13.8	7.5	3.5	chr17	59407795	59408076	(23849365)	C	AluJo	SINE/Alu	(18)	294	1	1647167
457	26.7	14.1	8.0	chr17	59408077	59408128	(23849313)	+	MIRb	SINE/MIR	119	172	(96)	1647166
2112	13.3	0.3	0.7	chr17	59408129	59408422	(23849019)	+	AluJo	SINE/Alu	1	293	(19)	1647168
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
195	42.1	0.0	1.0	chr17	60876371	60876466	(22380975)	+	L2c	LINE/L2	3078	3172	(215)	1650204
275	31.5	2.1	0.0	chr17	60876499	60876590	(22380851)	C	MER103C	DNA/hAT-Charlie	(1)	296	203	1650205
1626	17.2	4.4	1.1	chr17	61015285	61015568	(22241873)	C	AluJr4	SINE/Alu	(8)	304	11	1650397
264	34.4	17.6	3.4	chr17	61189247	61190232	(22067209)	C	L2	LINE/L2	(337)	3082	1926	1650642
2307	11.1	0.0	0.3	chr17	61190244	61190550	(22066891)	+	AluSx	SINE/Alu	1	306	(6)	1650643
1202	14.2	1.0	7.5	chr17	61190551	61190594	(22066847)	+	AluJo	SINE/Alu	83	125	(187)	1650644
1977	14.6	0.0	2.6	chr17	62111386	62111687	(21145754)	C	AluSq2	SINE/Alu	(19)	294	1	1652287
2313	11.6	0.0	0.3	chr17	62370373	62370674	(20886767)	+	AluSq2	SINE/Alu	1	301	(12)	1652811
343	31.6	5.4	10.2	chr17	62707668	62707864	(20549577)	+	L2c	LINE/L2	3184	3373	(14)	1653552
1596	16.1	2.4	0.4	chr17	62707865	62708113	(20549328)	+	AluJr	SINE/Alu	45	298	(14)	1653553
1804	17.4	0.3	0.7	chr17	62725266	62725563	(20531878)	C	AluJb	SINE/Alu	(14)	298	2	1653580
701	28.5	13.3	3.8	chr17	62727600	62728019	(20529422)	+	HAL1ME	LINE/L1	9	474	(1991)	1653587
1425	18.1	6.4	1.4	chr17	62728043	62728324	(20529117)	C	AluJr	SINE/Alu	(15)	297	1	1653588
332	23.1	4.9	0.0	chr17	63001430	63001507	(20255934)	C	L2c	LINE/L2	(0)	3387	3306	1654100
18	18.1	0.0	0.0	chr17	63001508	63001540	(20255901)	+	(T)n	Simple_repeat	1	33	(0)	1654101
2004	14.7	2.6	1.0	chr17	63001541	63001847	(20255594)	C	AluSz	SINE/Alu	(0)	312	1	1654102
20	11.2	0.0	0.0	chr17	63004593	63004621	(20252820)	+	(A)n	Simple_repeat	1	29	(0)	1654107
15	4.8	0.0	0.0	chr17	63155341	63155362	(20102079)	+	(TCA)n	Simple_repeat	1	22	(0)	1654332
4664	16.8	4.4	1.0	chr17	63297115	63298700	(19958741)	+	L1MB5	LINE/L1	5036	6672	(0)	1654539
319	26.1	11.5	0.7	chr17	63621231	63621369	(19636072)	+	L1ME4a	LINE/L1	5746	5901	(223)	1655051
310	15.2	20.0	1.1	chr17	63621414	63621506	(19635935)	+	L1ME4a	LINE/L1	6007	6121	(3)	1655051
14	7.0	0.0	10.5	chr17	63826976	63827013	(19430428)	+	(TTCCAC)n	Simple_repeat	1	38	(0)	1655423
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
2391	6.7	1.0	0.3	chr17	63843361	63843659	(19413782)	+	AluSq2	SINE/Alu	9	309	(4)	1655442
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
28	18.0	8.7	1.8	chr17	64508838	64508942	(18748499)	+	(TTGAATA)n	Simple_repeat	1	112	(0)	1656729
313	24.2	10.1	3.1	chr17	66907571	66907728	(16349713)	C	MIRc	SINE/MIR	(27)	181	12	1661029
1644	10.7	12.2	4.4	chr17	66907771	66908042	(16349399)	C	AluSx	SINE/Alu	(16)	296	1	1661030
2178	14.3	1.3	0.3	chr17	66908044	66908351	(16349090)	C	AluSz	SINE/Alu	(1)	311	1	1661031
1287	14.5	7.4	3.1	chr17	68019554	68019772	(15237669)	C	L1MA4	LINE/L1	(41)	6259	6029	1663340
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
21	24.9	1.5	1.4	chr17	68196514	68196581	(15060860)	+	G-rich	Low_complexity	1	69	(0)	1663727
910	14.6	0.0	0.0	chr17	68297637	68297766	(14959675)	C	FLAM_C	SINE/Alu	(13)	130	1	1663917
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
233	31.9	9.4	7.1	chr17	78226607	78226936	(5030505)	C	L2a	LINE/L2	(0)	3426	3043	1681451
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
308	21.7	7.8	0.0	chr18	7946796	7946878	(72426407)	+	LTR79	LTR/ERVL	10	99	(428)	1700791
849	23.1	9.1	1.6	chr18	7946897	7947212	(72426073)	+	LTR79	LTR/ERVL	145	486	(41)	1700791
236	23.4	21.5	0.8	chr18	35377485	35377609	(44995676)	C	MIRc	SINE/MIR	(26)	242	85	1733225
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
262	18.4	0.0	0.0	chr18	57737665	57737713	(22635572)	C	L1MB3	LINE/L1	(43)	6140	6092	1766077
575	14.7	1.6	10.1	chr19	1241392	1241549	(57376067)	C	FLAM_C	SINE/Alu	(90)	212	7	1798452
14	8.3	0.0	3.6	chr19	1905230	1905257	(56712359)	+	(CGGGG)n	Simple_repeat	1	28	(0)	1799731
519	23.1	1.7	1.7	chr19	3185311	3185429	(55432187)	C	L2a	LINE/L2	(0)	3426	3308	1802593
286	28.1	3.5	7.3	chr19	8552851	8553000	(50064616)	C	LTR91	LTR/ERVL	(15)	184	41	1815564
731	17.2	0.0	0.0	chr19	9675436	9675551	(48942065)	+	FLAM_C	SINE/Alu	1	116	(27)	1817897
14	11.7	0.0	3.3	chr19	16572409	16572445	(42045171)	+	(GCGGG)n	Simple_repeat	1	35	(0)	1834225
579	13.8	11.2	4.3	chr19	17215131	17215246	(41402370)	C	AluJr	SINE/Alu	(187)	125	1	1835760
997	7.9	0.0	0.0	chr19	17419595	17419721	(41197895)	C	AluSc	SINE/Alu	(182)	127	1	1836293
181	32.4	4.3	1.8	chr19	18224033	18224145	(40393471)	+	L2c	LINE/L2	3005	3120	(267)	1838407
209	30.3	3.3	3.3	chr19	19191934	19192025	(39425591)	C	MIR3	SINE/MIR	(116)	92	1	1840465
221	35.4	13.6	2.9	chr19	29845601	29846056	(28771560)	+	L2	LINE/L2	2333	2845	(574)	1850976
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
235	31.1	2.1	6.0	chr19	35291396	35291598	(23326018)	C	L2a	LINE/L2	(188)	3187	2998	1860112
215	33.6	6.0	1.6	chr19	35291598	35291724	(23325892)	C	L2a	LINE/L2	(0)	3426	3294	1860113
217	34.9	1.1	2.3	chr19	35748107	35748194	(22869422)	+	MIRb	SINE/MIR	182	268	(0)	1861067
838	26.6	12.5	0.7	chr19	36128478	36128765	(22488851)	+	LTR10B	LTR/ERV1	179	505	(0)	1861928
624	15.4	5.9	6.6	chr19	39444961	39445096	(19172520)	+	FLAM_C	SINE/Alu	1	135	(8)	1869088
210	29.2	20.3	0.0	chr19	39445119	39445224	(19172392)	+	MIRb	SINE/MIR	23	155	(113)	1869089
429	31.0	2.4	3.3	chr19	44207025	44207234	(14410382)	C	L1ME3A	LINE/L1	(5521)	721	514	1878355
2394	9.4	0.7	0.3	chr19	44259489	44259797	(14357819)	C	AluSg	SINE/Alu	(0)	310	1	1878455
193	27.3	0.0	0.0	chr19	45405400	45405443	(13212173)	+	MIR3	SINE/MIR	111	154	(54)	1881219
64	2.4	6.9	0.0	chr19	47048969	47049055	(11568561)	+	(TCTT)n	Simple_repeat	1	93	(0)	1885144
1365	24.2	8.4	1.8	chr19	47707125	47707590	(10910026)	C	L2a	LINE/L2	(241)	3185	2678	1886819
1808	26.7	5.4	12.6	chr19	48403533	48403709	(10213907)	C	L2a	LINE/L2	(1096)	2323	2139	1888663
486	29.3	3.1	3.1	chr19	48403860	48403957	(10213659)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	350	1888669
934	9.0	0.8	0.0	chr19	48644773	48644894	(9972722)	C	AluSx	SINE/Alu	(189)	123	1	1889269
214	32.0	1.0	4.8	chr19	53977759	53977863	(4639753)	C	MIR3	SINE/MIR	(23)	185	85	1900727
222	31.5	2.1	4.5	chr19	54178543	54178659	(4438957)	C	MIR3	SINE/MIR	(120)	148	31	1901248
667	14.3	0.0	0.0	chr19	55152321	55152432	(3465184)	+	MER44D	DNA/TcMar-Tigger	2	113	(592)	1903109
196	29.7	1.5	1.5	chr19	55280120	55280184	(3337432)	C	OldhAT1	DNA/hAT-Ac	(750)	2098	2034	1903374
12	13.2	9.3	2.1	chr19	55580979	55581021	(3036595)	+	G-rich	Low_complexity	1	47	(0)	1904074
16	0.0	0.0	0.0	chr19	55634771	55634788	(2982828)	+	(T)n	Simple_repeat	1	18	(0)	1904202
17	20.8	0.0	2.2	chr19	55642486	55642495	(2975121)	+	(GCCGCT)n	Simple_repeat	1	45	(0)	1904220
13	23.3	0.0	0.0	chr19	55642496	55642530	(2975086)	+	(GCT)n	Simple_repeat	1	35	(0)	1904221
13	34.3	1.6	0.0	chr19	55654291	55654353	(2963263)	+	(TCCCCT)n	Simple_repeat	1	64	(0)	1904235
15	10.4	3.0	2.9	chr19	55675287	55675319	(2942297)	+	(GGC)n	Simple_repeat	1	34	(0)	1904272
12	25.8	0.0	0.0	chr19	55675311	55675347	(2942269)	+	(GCGT)n	Simple_repeat	1	37	(0)	1904273
3606	11.2	5.4	1.1	chr19	57579173	57579723	(1037893)	C	MER4D1	LTR/ERV1	(324)	576	1	1908004
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
250	11.1	2.2	0.0	chr2	2613547	2613591	(239579938)	C	L1M6	LINE/L1	(5901)	595	550	1913479
194	27.3	0.0	0.0	chr2	2613680	2613723	(239579806)	+	LFSINE_Vert	SINE/tRNA	358	401	(58)	1913480
522	28.4	2.1	0.5	chr2	3652018	3652201	(238541328)	C	MLT1N2	LTR/ERVL-MaLR	(14)	548	362	1914780
13	21.2	2.6	0.0	chr2	26244721	26244758	(215948771)	+	(TGGCCCC)n	Simple_repeat	1	39	(0)	1949598
30	17.0	0.0	0.0	chr2	26245248	26245300	(215948229)	+	(GT)n	Simple_repeat	1	53	(0)	1949599
242	30.7	13.6	2.8	chr2	27772099	27772242	(214421287)	C	MIR3	SINE/MIR	(32)	176	15	1952467
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
310	33.8	11.7	4.1	chr2	37196705	37197019	(204996510)	C	L1M4b	LINE/L1	(6274)	593	252	1967324
15	0.0	0.0	0.0	chr2	38778058	38778076	(203415453)	+	(ATT)n	Simple_repeat	1	19	(0)	1969948
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
11	13.4	4.2	8.0	chr2	44362005	44362052	(197831477)	+	(GAGACGC)n	Simple_repeat	1	50	(0)	1979091
32	2.7	2.6	0.0	chr2	53787126	53787163	(188406366)	+	(CCT)n	Simple_repeat	1	39	(0)	1993127
187	33.6	4.6	2.8	chr2	56185888	56185994	(186007535)	+	OldhAT1	DNA/hAT-Ac	1847	1955	(893)	1997105
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
247	25.4	13.9	4.0	chr2	69893670	69893817	(172299712)	+	L1ME4c	LINE/L1	608	772	(58)	2017954
481	32.7	1.8	2.9	chr2	70141286	70141455	(172052074)	+	MIRb	SINE/MIR	78	245	(23)	2018485
354	28.0	4.7	10.1	chr2	74454680	74454836	(167738693)	+	L2c	LINE/L2	3208	3385	(2)	2025425
32	21.5	2.7	0.0	chr2	85418577	85418651	(156774878)	+	(CA)n	Simple_repeat	1	77	(0)	2040720
41	0.0	0.0	0.0	chr2	88170415	88170452	(154023077)	+	(CGCGCCC)n	Simple_repeat	1	38	(0)	2045404
189	29.9	2.2	5.4	chr2	96305875	96305966	(145887563)	C	MIRc	SINE/MIR	(81)	187	99	2051901
186	21.6	2.6	0.0	chr2	101002432	101002468	(141191061)	C	L3b	LINE/CR1	(101)	5131	5094	2058833
265	29.2	6.6	5.8	chr2	108448919	108449038	(133744491)	C	MIRc	SINE/MIR	(123)	145	25	2069252
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
26	0.0	0.0	0.0	chr2	130372356	130372380	(111821149)	+	(GACGGG)n	Simple_repeat	1	25	(0)	2101734
20	16.4	0.0	0.0	chr2	156332922	156332955	(85860574)	+	(T)n	Simple_repeat	1	34	(0)	2137288
637	18.3	0.0	0.0	chr2	163407346	163407465	(78786064)	C	UCON35	Unknown	(11)	120	1	2146908
896	29.1	13.5	1.3	chr2	163407663	163408111	(78785418)	+	LTR33	LTR/ERVL	1	512	(3)	2146909
1619	14.3	3.1	5.0	chr2	171923275	171923574	(70269955)	C	AluJr	SINE/Alu	(18)	294	1	2159275
1104	5.0	0.0	4.3	chr2	189763324	189763464	(52430065)	+	AluSx3	SINE/Alu	173	307	(4)	2183332
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
13	20.5	0.0	4.7	chr2	201451406	201451448	(40742081)	+	(GCAGCC)n	Simple_repeat	1	43	(0)	2200073
2413	16.4	4.4	1.4	chr2	219642890	219643329	(22550200)	C	LTR32	LTR/ERVL	(3)	454	1	2228256
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
83	2.5	0.0	0.0	chr20	10034876	10034957	(54409210)	+	(GGCGGA)n	Simple_repeat	1	82	(0)	2279873
13	10.0	5.9	2.8	chr20	31880001	31880034	(32564133)	+	G-rich	Low_complexity	1	36	(0)	2307086
28	3.3	0.0	0.0	chr20	31880262	31880292	(32563875)	+	(TCCA)n	Simple_repeat	1	31	(0)	2307087
278	28.6	8.2	0.9	chr20	31880297	31880409	(32563758)	C	L2b	LINE/L2	(0)	3375	3254	2307088
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
315	28.4	0.0	0.0	chr20	35619822	35619888	(28824279)	+	MIRb	SINE/MIR	119	185	(83)	2315689
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
358	29.8	18.9	3.9	chr20	40797736	40798252	(23645915)	C	L2c	LINE/L2	(455)	2964	2352	2326452
50	0.0	0.0	0.0	chr20	41650891	41650935	(22793232)	+	(ATA)n	Simple_repeat	1	45	(0)	2327861
278	28.6	0.0	3.5	chr20	41650957	41651043	(22793124)	C	MIR	SINE/MIR	(140)	122	39	2327862
201	11.4	2.8	0.0	chr20	44475680	44475714	(19968453)	+	MIR3	SINE/MIR	104	139	(69)	2333612
227	16.2	0.0	0.0	chr20	44475684	44475720	(19968447)	+	MIRc	SINE/MIR	112	148	(120)	2333613
751	28.7	12.2	2.1	chr20	44736275	44736562	(19707605)	C	MLT1J2	LTR/ERVL-MaLR	(127)	321	1	2334220
18	14.1	0.0	8.9	chr20	46364476	46364531	(18079636)	+	G-rich	Low_complexity	1	56	(0)	2337537
12	20.8	0.0	2.9	chr20	46364531	46364565	(18079602)	+	(GTCTG)n	Simple_repeat	1	35	(0)	2337538
590	30.3	6.5	7.2	chr20	47157485	47157953	(17286214)	+	L1M5	LINE/L1	3209	3673	(2473)	2339350
234	24.5	0.0	0.0	chr20	47158082	47158130	(17286037)	+	MIR3	SINE/MIR	109	157	(51)	2339351
4518	18.0	6.2	10.4	chr20	47158543	47159707	(17284460)	+	L1MC3	LINE/L1	6649	7761	(24)	2339353
617	32.6	11.8	0.0	chr20	47759716	47759994	(16684173)	+	L2a	LINE/L2	3086	3405	(21)	2340786
616	28.8	11.9	3.3	chr20	47760207	47760598	(16683569)	+	LTR33	LTR/ERVL	39	468	(47)	2340788
1869	11.7	9.7	1.5	chr20	47767363	47767498	(16676669)	+	AluSz	SINE/Alu	1	136	(176)	2340804
2146	11.4	1.7	0.0	chr20	47767499	47767788	(16676379)	+	AluY	SINE/Alu	1	295	(16)	2340805
296	27.8	0.8	8.0	chr20	47851261	47851397	(16592770)	+	MER104	DNA/TcMar-Tc2	6	132	(49)	2340981
472	27.2	15.9	4.0	chr20	47851415	47851789	(16592378)	C	LTR33	LTR/ERVL	(51)	464	37	2340982
801	29.9	11.6	6.7	chr20	47879411	47879560	(16564607)	C	LTR16D	LTR/ERVL	(373)	278	133	2341033
1762	21.4	14.3	3.0	chr20	47879561	47880031	(16564136)	+	LTR53B	LTR/ERVL	1	533	(0)	2341036
206	26.3	0.0	6.6	chr20	47925125	47925185	(16518982)	C	L2a	LINE/L2	(12)	3414	3358	2341120
1210	29.7	8.4	2.0	chr20	47925261	47925717	(16518450)	+	LTR16C	LTR/ERVL	1	489	(0)	2341121
362	30.8	5.6	4.7	chr20	47925718	47925928	(16518239)	C	MLT1K	LTR/ERVL-MaLR	(3)	592	380	2341122
1328	29.8	8.3	7.0	chr20	47926061	47926847	(16517320)	C	L1MEb	LINE/L1	(5253)	817	20	2341123
432	32.5	9.6	0.0	chr20	47926866	47927025	(16517142)	C	MLT1K	LTR/ERVL-MaLR	(329)	266	90	2341122
19	12.0	6.7	0.0	chr20	47944024	47944077	(16500090)	+	(CACCCAA)n	Simple_repeat	1	57	(0)	2341160
367	28.0	9.1	2.1	chr20	47944268	47944460	(16499707)	C	L2	LINE/L2	(411)	3008	2801	2341161
283	30.4	7.5	0.0	chr20	47948797	47948931	(16495236)	+	MIRc	SINE/MIR	20	165	(103)	2341172
1704	26.2	3.4	3.7	chr20	47948994	47949381	(16494786)	+	MER20B	DNA/hAT-Charlie	185	567	(216)	2341173
268	26.2	3.6	2.4	chr20	48144797	48144878	(16299289)	+	MIR	SINE/MIR	33	115	(147)	2341539
29	0.0	0.0	0.0	chr20	48144900	48144924	(16299243)	+	(TG)n	Simple_repeat	1	25	(0)	2341540
295	22.4	5.0	1.3	chr20	48144956	48145032	(16299135)	C	MADE2	DNA/TcMar-Mariner	(0)	80	1	2341541
211	29.0	0.0	1.4	chr20	48145045	48145114	(16299053)	+	MIR	SINE/MIR	187	255	(7)	2341539
2106	16.1	4.6	2.7	chr20	48145217	48145753	(16298414)	C	MLT2A2	LTR/ERVL	(2)	552	1	2341542
2365	25.7	6.7	4.7	chr20	48317118	48318367	(16125800)	+	L1MDa	LINE/L1	17	1489	(5144)	2341883
992	30.1	11.7	3.8	chr20	48318364	48318492	(16125675)	C	HAL1	LINE/L1	(43)	2464	2349	2341884
992	29.5	12.2	2.8	chr20	48318804	48319664	(16124503)	C	HAL1	LINE/L1	(159)	2348	1433	2341884
2438	10.1	0.0	1.3	chr20	48334800	48335116	(16109051)	+	AluSq2	SINE/Alu	1	313	(0)	2341910
522	29.9	0.0	0.7	chr20	48357874	48358018	(16086149)	+	MIR3	SINE/MIR	65	208	(0)	2341947
595	26.2	3.4	2.3	chr20	48358043	48358218	(16085949)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	2341948
282	27.4	14.1	0.9	chr20	48392971	48393191	(16050976)	C	L2	LINE/L2	(3109)	310	56	2342014
217	23.9	15.9	0.8	chr20	48413357	48413484	(16030683)	C	L2a	LINE/L2	(213)	3162	3011	2342045
532	31.2	9.3	1.1	chr20	48413548	48413735	(16030432)	C	MIR	SINE/MIR	(0)	262	58	2342048
646	22.5	15.1	3.4	chr20	48460617	48460944	(15983223)	C	L2a	LINE/L2	(250)	3176	2818	2342143
1236	25.7	7.2	2.5	chr20	48460945	48461205	(15982962)	C	MER113	DNA/hAT-Charlie	(22)	499	226	2342145
2958	18.7	8.7	6.7	chr20	48461206	48461881	(15982286)	C	LTR8	LTR/ERV1	(0)	691	1	2342146
394	31.6	0.0	0.0	chr20	48467540	48467634	(15976533)	+	MER81	DNA/hAT-Blackjack	20	114	(0)	2342158
942	28.2	12.4	1.3	chr20	48467719	48468103	(15976064)	+	MLT1J	LTR/ERVL-MaLR	77	510	(2)	2342159
227	29.9	0.8	5.9	chr20	48502760	48502894	(15941273)	+	MLT2B4	LTR/ERVL	295	422	(134)	2342238
240	27.4	5.6	4.3	chr20	48502951	48503091	(15941076)	+	MLT2B4	LTR/ERVL	274	416	(140)	2342239
763	19.9	0.4	0.6	chr20	48502971	48503203	(15940964)	+	D20S16	Satellite	1	289	(13170)	2342240
249	27.7	4.1	4.7	chr20	48503204	48503351	(15940816)	+	MLT2B4	LTR/ERVL	285	431	(125)	2342241
18	26.5	0.0	0.0	chr20	48526125	48526166	(15918001)	+	(TG)n	Simple_repeat	1	42	(0)	2342281
5297	11.0	7.8	2.0	chr20	48537153	48537999	(15906168)	C	MER4D1	LTR/ERV1	(0)	900	1	2342307
260	33.3	2.4	1.6	chr20	48539218	48539342	(15904825)	+	MLT1K	LTR/ERVL-MaLR	468	593	(2)	2342309
2266	15.0	0.8	2.7	chr20	48542457	48542827	(15901340)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2342316
2653	17.2	2.9	2.7	chr20	48548946	48549430	(15894737)	C	MER66B	LTR/ERV1	(0)	486	1	2342325
761	27.7	10.7	3.0	chr20	48549454	48549686	(15894481)	+	L2a	LINE/L2	2643	2897	(522)	2342326
512	23.4	2.6	0.0	chr20	48549687	48549797	(15894370)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2342327
909	28.0	5.5	12.6	chr20	48549798	48550380	(15893787)	+	L2a	LINE/L2	2898	3425	(1)	2342326
505	24.4	4.3	0.8	chr20	48565122	48565243	(15878924)	C	MLT1K	LTR/ERVL-MaLR	(343)	252	139	2342361
1900	20.4	10.2	1.8	chr20	48565315	48565824	(15878343)	+	MER74A	LTR/ERVL	1	558	(0)	2342362
322	25.5	5.7	6.9	chr20	48572088	48572277	(15871890)	+	MER113B	DNA/hAT-Charlie	118	310	(4)	2342373
1204	26.7	10.7	1.5	chr20	48594790	48595249	(15848918)	+	MLT1K	LTR/ERVL-MaLR	89	595	(0)	2342423
1201	25.1	6.2	2.0	chr20	48674185	48674586	(15769581)	C	ORSL-2b	DNA/hAT-Tip100	(57)	451	32	2342596
324	22.5	2.4	0.0	chr20	48674591	48674670	(15769497)	+	MIR3	SINE/MIR	58	139	(69)	2342597
452	28.5	15.9	1.8	chr20	48692314	48692588	(15751579)	+	L1ME3B	LINE/L1	5916	6236	(6)	2342640
653	26.4	10.4	2.4	chr20	48706169	48706416	(15737751)	+	L4_B_Mam	LINE/RTE-X	4465	4734	(207)	2342677
339	27.1	7.1	5.5	chr20	48706454	48706651	(15737516)	+	MLT1L	LTR/ERVL-MaLR	82	389	(221)	2342678
1289	17.4	1.3	5.7	chr20	48713523	48713769	(15730398)	+	AluJr4	SINE/Alu	71	306	(6)	2342695
732	9.1	0.0	0.9	chr20	48713770	48713880	(15730287)	+	L1PA8	LINE/L1	6063	6172	(0)	2342696
591	20.3	5.0	11.1	chr20	48758012	48758183	(15685984)	C	LTR16C	LTR/ERVL	(8)	481	321	2342797
1538	22.8	13.3	11.1	chr20	48816307	48816966	(15627201)	+	MLT1E1A	LTR/ERVL-MaLR	3	679	(1)	2342939
1916	15.2	0.3	0.7	chr20	48834567	48834855	(15609312)	C	AluJr	SINE/Alu	(20)	292	5	2342971
208	14.3	0.0	0.0	chr20	48834856	48834890	(15609277)	C	MIR	SINE/MIR	(13)	249	215	2342972
1290	8.5	1.2	0.0	chr20	48834891	48835054	(15609113)	C	AluSx1	SINE/Alu	(146)	166	1	2342973
238	23.3	0.0	4.8	chr20	48835060	48835122	(15609045)	C	MLT1J	LTR/ERVL-MaLR	(314)	198	100	2342974
453	26.5	12.0	0.7	chr20	48864252	48864399	(15579768)	C	L2a	LINE/L2	(0)	3426	3260	2343054
757	29.9	2.4	2.0	chr20	48864415	48864660	(15579507)	C	MIRb	SINE/MIR	(8)	260	14	2343055
821	19.2	2.9	2.3	chr20	48884971	48885141	(15559026)	+	MIR	SINE/MIR	36	207	(55)	2343108
377	25.3	0.0	3.3	chr20	48885233	48885322	(15558845)	+	L2a	LINE/L2	3340	3426	(0)	2343109
1998	15.7	0.0	0.3	chr20	48917546	48917839	(15526328)	+	AluJr	SINE/Alu	1	293	(19)	2343208
1643	25.4	12.4	7.0	chr20	48917840	48917850	(15526317)	C	MER20B	DNA/hAT-Charlie	(421)	362	356	2343207
897	15.8	26.0	1.9	chr20	48917851	48918065	(15526102)	+	AluJr4	SINE/Alu	2	286	(26)	2343209
1643	25.4	12.4	7.0	chr20	48918066	48918076	(15526091)	C	MER20B	DNA/hAT-Charlie	(428)	355	355	2343207
237	33.9	8.3	0.0	chr20	48922142	48922262	(15521905)	C	MIR1_Amn	SINE/MIR	(78)	152	21	2343221
645	23.2	0.8	0.0	chr20	48922578	48922702	(15521465)	+	L2a	LINE/L2	3300	3425	(1)	2343222
195	37.8	3.0	1.6	chr20	49911805	49911933	(14532234)	C	MIRb	SINE/MIR	(132)	136	6	2345594
1849	13.6	2.7	0.3	chr20	49912172	49912458	(14531709)	+	AluSx1	SINE/Alu	1	294	(18)	2345595
2026	11.7	4.7	0.0	chr20	50155125	50155407	(14288760)	+	AluSq2	SINE/Alu	1	297	(16)	2346215
17	18.2	0.0	0.0	chr20	50155793	50155823	(14288344)	+	G-rich	Low_complexity	1	31	(0)	2346216
434	25.0	1.7	1.7	chr20	50237373	50237490	(14206677)	C	L1ME3G	LINE/L1	(392)	532	415	2346432
15	12.4	3.9	7.5	chr20	50237589	50237639	(14206528)	+	(TGGC)n	Simple_repeat	1	53	(0)	2346433
21	9.6	8.5	3.1	chr20	50237640	50237646	(14206521)	+	(ATGGCTGG)n	Simple_repeat	2	64	(0)	2346434
524	23.4	12.6	1.8	chr20	50354515	50354684	(14089483)	+	MIRb	SINE/MIR	22	212	(56)	2346708
518	24.4	10.9	4.6	chr20	51496058	51496324	(12947843)	C	MER102a	DNA/hAT-Charlie	(3)	338	56	2349245
2910	11.0	13.8	1.5	chr20	51996220	51996682	(12447485)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2350485
684	22.2	6.1	6.6	chr20	51996683	51996863	(12447304)	+	MER20	DNA/hAT-Charlie	39	219	(0)	2350484
1452	17.0	0.4	0.4	chr20	52060623	52060870	(12383297)	C	L1MD3	LINE/L1	(18)	7977	7730	2350664
190	25.6	11.3	6.7	chr20	52060881	52061014	(12383153)	+	L2a	LINE/L2	3263	3403	(23)	2350665
24205	5.0	0.9	0.1	chr20	54240043	54244144	(10200023)	+	L1PA4	LINE/L1	2037	6155	(0)	2355327
729	19.0	14.3	0.0	chr20	54417262	54417435	(10026732)	+	L1PA16	LINE/L1	5955	6157	(9)	2355648
13	11.9	1.1	9.9	chr20	54417440	54417490	(10026677)	+	A-rich	Low_complexity	1	46	(0)	2355649
477	30.9	1.8	0.6	chr20	54417569	54417731	(10026436)	+	MIR	SINE/MIR	98	262	(0)	2355650
15	25.6	0.0	0.0	chr20	54417737	54417770	(10026397)	+	(AT)n	Simple_repeat	1	34	(0)	2355651
2195	10.8	3.0	0.0	chr20	54495609	54495895	(9948272)	+	AluSx1	SINE/Alu	1	296	(16)	2355804
3446	16.9	6.6	3.8	chr20	54544502	54545207	(9898960)	C	LTR8A	LTR/ERV1	(0)	727	1	2355895
1154	21.6	0.9	0.0	chr20	54547083	54547304	(9896863)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	2355898
2495	7.2	0.0	0.7	chr20	54568649	54568955	(9875212)	+	AluY	SINE/Alu	1	305	(6)	2355934
675	31.4	6.1	4.2	chr20	54574769	54575428	(9868739)	+	L1MC5a	LINE/L1	2035	2533	(244)	2355947
2164	10.8	0.0	0.0	chr20	54575444	54575720	(9868447)	C	AluSx1	SINE/Alu	(15)	297	21	2355948
355	30.9	1.8	5.7	chr20	54589018	54589192	(9854975)	C	MIRb	SINE/MIR	(0)	268	101	2355966
2334	8.5	0.0	1.4	chr20	54604719	54605013	(9839154)	+	AluSg7	SINE/Alu	1	291	(18)	2355995
28	8.6	0.0	0.0	chr20	54605025	54605062	(9839105)	+	(AC)n	Simple_repeat	1	38	(0)	2355996
24	3.5	0.0	0.0	chr20	54605109	54605137	(9839030)	+	(AC)n	Simple_repeat	1	29	(0)	2355996
19	4.3	0.0	0.0	chr20	54605137	54605160	(9839007)	+	(AG)n	Simple_repeat	1	24	(0)	2355997
406	33.6	0.0	0.0	chr20	54605712	54605836	(9838331)	C	L2a	LINE/L2	(4)	3422	3298	2355998
309	30.0	8.0	5.7	chr20	54605872	54606030	(9838137)	C	MIRb	SINE/MIR	(54)	214	52	2355999
16	17.9	2.5	0.0	chr20	54615255	54615271	(9828896)	+	(ATA)n	Simple_repeat	1	17	(0)	2356020
2105	20.6	1.8	8.7	chr20	54615272	54615630	(9828537)	+	MLT1D	LTR/ERVL-MaLR	1	325	(180)	2356021
1646	21.3	9.3	3.1	chr20	54715104	54715524	(9728643)	+	MLT2B1	LTR/ERVL	3	452	(68)	2356225
2262	11.6	4.9	2.5	chr20	54717199	54717553	(9726614)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2356228
253	26.7	11.8	0.0	chr20	54717554	54717572	(9726595)	C	MIR1_Amn	SINE/MIR	(158)	72	52	2356227
599	31.8	9.1	2.1	chr20	54729332	54729659	(9714508)	+	LTR16C	LTR/ERVL	124	476	(13)	2356253
389	36.7	7.7	5.7	chr20	54733045	54733653	(9710514)	C	L2c	LINE/L2	(4)	3383	2747	2356264
2265	24.3	2.1	2.1	chr20	54763613	54764142	(9680025)	+	LTR31	LTR/ERV1	75	604	(15)	2356306
345	36.9	2.3	0.8	chr20	54764170	54764300	(9679867)	C	L2	LINE/L2	(532)	2887	2755	2356307
2265	11.8	2.2	2.2	chr20	54768118	54768480	(9675687)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	2356316
598	30.7	3.2	0.9	chr20	54769828	54770044	(9674123)	C	MIR	SINE/MIR	(35)	227	6	2356321
1296	24.4	6.3	1.7	chr20	54777511	54777856	(9666311)	C	MLT1A	LTR/ERVL-MaLR	(11)	363	1	2356333
268	35.8	5.7	4.8	chr20	54777886	54778284	(9665883)	+	LTR88a	LTR/Gypsy?	130	532	(284)	2356337
1492	21.8	13.7	0.9	chr20	54779316	54779760	(9664407)	C	LTR108a_Mam	LTR/ERVL	(0)	511	1	2356341
309	25.0	0.0	10.3	chr20	54779763	54779869	(9664298)	+	MIR	SINE/MIR	120	215	(47)	2356340
17861	18.6	2.0	1.8	chr20	54789948	54795405	(9648762)	C	L1PREC2	LINE/L1	(1825)	6316	25	2356346
280	25.6	5.7	4.7	chr20	54801255	54801340	(9642827)	C	MIR	SINE/MIR	(3)	259	173	2356358
47	23.7	4.5	0.0	chr20	54801358	54801491	(9642676)	+	(TA)n	Simple_repeat	1	140	(0)	2356359
1447	15.9	1.8	12.4	chr20	54813633	54813946	(9630221)	C	AluSx1	SINE/Alu	(32)	280	1	2356381
2403	8.5	0.7	0.0	chr20	54814182	54814474	(9629693)	+	AluSg4	SINE/Alu	1	295	(15)	2356382
307	21.5	13.4	0.9	chr20	54817150	54817269	(9626898)	+	X7B_LINE	LINE/CR1	21	186	(64)	2356385
322	35.3	2.0	1.3	chr20	54817304	54817455	(9626712)	+	L3	LINE/CR1	3887	4039	(60)	2356386
7115	15.9	1.4	1.2	chr20	54817566	54818842	(9625325)	+	ERVL-B4-int	LTR/ERVL	4436	5714	(0)	2356387
191	30.1	5.4	10.9	chr20	54822764	54822901	(9621266)	+	Tigger19b	DNA/TcMar-Tigger	199	328	(222)	2356395
550	34.2	6.4	3.5	chr20	54823125	54823521	(9620646)	C	LTR101_Mam	LTR/ERVL	(363)	466	58	2356396
337	26.8	9.4	5.2	chr20	54827837	54827972	(9616195)	+	MIRc	SINE/MIR	1	167	(101)	2356406
2246	9.6	0.3	3.0	chr20	54835871	54836173	(9607994)	C	AluSx3	SINE/Alu	(16)	295	1	2356421
508	32.9	4.8	7.1	chr20	54836174	54836352	(9607815)	+	Helitron3Na_Mam	RC/Helitron	291	464	(22)	2356420
697	17.2	1.8	18.9	chr20	54836655	54836855	(9607312)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	2356423
1579	12.9	14.3	0.3	chr20	54849465	54849829	(9594338)	+	MSTB	LTR/ERVL-MaLR	1	425	(1)	2356445
888	34.4	0.8	4.7	chr20	54849830	54850023	(9594144)	+	LTR16E1	LTR/ERVL	358	537	(1)	2356444
752	24.6	2.1	5.7	chr20	54881259	54881452	(9562715)	+	MER58A	DNA/hAT-Charlie	1	187	(37)	2356492
21257	14.4	0.9	0.9	chr20	54897439	54900748	(9543419)	+	L1MA3	LINE/L1	22	3332	(4233)	2356515
2181	7.4	0.0	0.0	chr20	54930018	54930312	(9513855)	C	AluYc	SINE/Alu	(0)	299	17	2356556
186	32.4	0.0	6.6	chr20	54936972	54937047	(9507120)	+	MamRTE1	LINE/RTE-BovB	2676	2746	(1066)	2356568
23	17.6	3.7	0.0	chr20	56393118	56393171	(8050996)	+	(ATACAT)n	Simple_repeat	1	56	(0)	2358931
18	4.5	0.0	0.0	chr20	56393171	56393193	(8050974)	+	(TG)n	Simple_repeat	1	23	(0)	2358932
429	21.2	0.0	2.3	chr20	56393243	56393329	(8050838)	C	MER34C2	LTR/ERV1	(0)	555	471	2358933
841	8.6	0.0	1.7	chr20	57350954	57351071	(7093096)	C	AluSx	SINE/Alu	(196)	116	1	2361034
568	29.3	5.0	11.5	chr20	57436426	57436679	(7007488)	+	MER113	DNA/hAT-Charlie	160	397	(124)	2361177
2608	14.8	3.9	0.8	chr20	57457196	57457663	(6986504)	+	LTR45B	LTR/ERV1	4	618	(4)	2361229
327	20.9	8.7	2.5	chr20	57622319	57622436	(6821731)	+	MER5B	DNA/hAT-Charlie	50	175	(3)	2361501
663	21.9	3.3	2.7	chr20	57997672	57997821	(6446346)	C	MIRb	SINE/MIR	(111)	157	7	2362206
117	24.6	1.1	0.0	chr20	57997823	57998108	(6446059)	+	G-rich	Low_complexity	1	289	(0)	2362207
239	6.7	0.0	0.0	chr20	58980914	58980943	(5463224)	C	ORSL	DNA/hAT-Tip100	(184)	91	62	2363757
189	24.4	0.0	0.0	chr20	58980963	58981003	(5463164)	C	MIRc	SINE/MIR	(115)	153	113	2363761
16	0.0	0.0	0.0	chr20	59949230	59949247	(4494920)	+	(T)n	Simple_repeat	1	18	(0)	2365228
2152	12.0	0.0	1.6	chr20	62121112	62121428	(2322739)	C	AluSx1	SINE/Alu	(0)	312	1	2368175
353	30.7	1.7	0.0	chr20	62232527	62232640	(2211527)	C	MER45A	DNA/hAT-Tip100	(0)	178	63	2368318
24	23.9	3.4	6.5	chr20	62387140	62387275	(2056892)	+	G-rich	Low_complexity	1	131	(0)	2368500
18	26.9	0.0	5.1	chr20	62652003	62652080	(1792087)	+	(CCCACC)n	Simple_repeat	1	78	(0)	2368794
19	19.2	0.0	0.0	chr20	62652215	62652250	(1791917)	+	(TG)n	Simple_repeat	1	36	(0)	2368795
759	19.1	4.4	0.0	chr20	63628567	63628697	(815470)	+	FLAM_C	SINE/Alu	1	137	(6)	2369787
346	26.2	8.7	3.1	chr20	63864155	63864284	(579883)	+	MIR	SINE/MIR	9	146	(116)	2370147
13	20.1	0.0	2.8	chr20	63978950	63978985	(465182)	+	(TCCG)n	Simple_repeat	1	36	(0)	2370320
15	4.1	0.0	6.9	chr20	64063098	64063126	(381041)	+	(GCGG)n	Simple_repeat	1	29	(0)	2370474
16	22.1	2.1	0.0	chr21	36385368	36385414	(10324569)	+	(GCGCGGC)n	Simple_repeat	1	48	(0)	2409764
369	35.9	11.8	1.7	chr21	40979929	40980279	(5729704)	+	L1MCa	LINE/L1	117	507	(5945)	2416800
439	18.2	4.0	6.7	chr21	40980460	40980575	(5729408)	+	L1MCa	LINE/L1	575	673	(5779)	2416800
655	28.4	7.7	0.2	chr21	41142429	41142657	(5567326)	C	MIR	SINE/MIR	(18)	250	3	2417023
269	25.0	2.6	3.8	chr21	41861418	41861496	(4848487)	+	MIRb	SINE/MIR	122	199	(69)	2418087
226	20.0	2.0	2.0	chr21	44013106	44013156	(2696827)	C	MIRc	SINE/MIR	(121)	147	97	2421181
1169	17.2	8.2	4.1	chr21	44583719	44584009	(2125974)	C	L1MA9	LINE/L1	(0)	6312	6009	2421915
11	21.8	2.2	4.3	chr21	44801596	44801641	(1908342)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	2422172
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
279	30.5	4.8	0.0	chr22	19168220	19168337	(31650131)	C	LTR16A1	LTR/ERVL	(313)	143	20	2431566
47	27.5	3.6	3.9	chr22	19431483	19431707	(31386761)	+	(GCC)n	Simple_repeat	1	233	(0)	2431996
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
12	12.1	7.9	2.4	chr22	29766978	29767015	(21051453)	+	(TCCTGCG)n	Simple_repeat	1	41	(0)	2451281
2395	8.1	1.0	0.0	chr22	31159700	31160008	(19658460)	C	AluSz	SINE/Alu	(0)	312	1	2454141
1189	22.6	4.0	1.8	chr22	31160009	31160038	(19658430)	C	L1MC4	LINE/L1	(1198)	6844	6816	2454140
445	31.1	6.2	3.2	chr22	36481120	36481308	(14337160)	C	MIRb	SINE/MIR	(29)	239	45	2465155
13	15.9	0.0	0.0	chr22	36481469	36481496	(14336972)	+	(CCGC)n	Simple_repeat	1	28	(0)	2465156
979	15.8	18.1	0.3	chr22	39533082	39533367	(11285101)	+	Charlie1	DNA/hAT-Charlie	2393	2740	(41)	2471834
184	34.0	4.1	2.1	chr22	43143535	43143630	(7674838)	+	L2a	LINE/L2	3327	3424	(2)	2479694
1075	22.0	13.7	3.7	chr22	43187850	43188009	(7630459)	C	BLACKJACK	DNA/hAT-Blackjack	(740)	2229	2079	2479780
15	10.0	2.9	2.9	chr22	45309983	45310022	(5508446)	+	(CGCTCT)n	Simple_repeat	1	40	(0)	2483679
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
658	32.3	0.5	2.6	chr3	4509085	4509310	(193786249)	C	MIRb	SINE/MIR	(37)	231	11	2499136
270	27.4	12.4	4.5	chr3	11272709	11272887	(187022672)	+	MIRb	SINE/MIR	3	196	(72)	2511142
238	25.4	3.1	1.6	chr3	14124435	14124498	(184171061)	+	MIRc	SINE/MIR	88	152	(116)	2516338
3354	6.6	2.8	0.2	chr3	14225058	14225513	(184070046)	+	LTR3A	LTR/ERVK	1	468	(16)	2516494
55	0.0	0.0	0.0	chr3	14403078	14403124	(183892435)	+	(GT)n	Simple_repeat	1	47	(0)	2516884
23	31.8	1.0	3.0	chr3	14403274	14403371	(183892188)	+	(TG)n	Simple_repeat	1	99	(0)	2516885
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
277	18.9	20.8	2.1	chr3	52771182	52771278	(145524281)	C	L2c	LINE/L2	(1)	3386	3267	2576441
430	15.5	17.7	0.8	chr3	52771281	52771397	(145524162)	C	L1ME2z	LINE/L1	(93)	6351	6211	2576442
2178	11.7	0.7	0.3	chr3	61823187	61823486	(136472073)	C	AluSc	SINE/Alu	(8)	301	1	2591294
226	35.2	7.4	0.8	chr3	62070462	62070587	(136224972)	C	L2b	LINE/L2	(1)	3374	3240	2591710
334	16.1	1.0	15.8	chr3	62196876	62196998	(136098561)	+	MER5A1	DNA/hAT-Charlie	16	121	(68)	2591926
530	29.5	3.5	5.4	chr3	62197068	62197271	(136098288)	+	MIRb	SINE/MIR	34	233	(35)	2591927
181	25.5	12.7	4.3	chr3	62255187	62255301	(136040258)	C	MamRTE1	LINE/RTE-BovB	(1257)	2555	2430	2592016
394	33.1	7.1	1.4	chr3	62255565	62255790	(136039769)	+	MIRb	SINE/MIR	8	251	(17)	2592017
355	24.0	1.5	12.2	chr3	62710239	62710385	(135585174)	+	MER5B	DNA/hAT-Charlie	3	133	(45)	2592732
244	17.8	0.0	0.0	chr3	62710423	62710467	(135585092)	+	MIR	SINE/MIR	88	132	(130)	2592733
643	22.5	0.8	0.0	chr3	62710470	62710598	(135584961)	C	L1ME4a	LINE/L1	(36)	6126	5997	2592734
679	25.2	5.6	4.5	chr3	63051320	63051564	(135243995)	C	MIR	SINE/MIR	(10)	252	5	2593347
223	26.5	7.4	6.8	chr3	63277702	63277926	(135017633)	+	L2a	LINE/L2	3147	3425	(1)	2593756
180	13.3	0.0	0.0	chr3	73409450	73409479	(124886080)	C	L2b	LINE/L2	(0)	3375	3346	2611144
1249	28.0	10.0	4.4	chr3	94162694	94163257	(104132302)	+	MLT1L	LTR/ERVL-MaLR	7	605	(5)	2633946
355	39.0	2.2	6.7	chr3	102163591	102163873	(96131686)	+	MamTip2	DNA/hAT-Tip100	33	302	(3)	2644177
612	31.2	8.9	4.8	chr3	110971074	110971493	(87324066)	C	LTR79	LTR/ERVL	(85)	442	4	2655932
843	27.2	3.9	9.4	chr3	119695448	119695913	(78599646)	+	MER65C	LTR/ERV1	1	439	(22)	2668022
16	14.6	0.0	6.8	chr3	123961449	123961492	(74334067)	+	G-rich	Low_complexity	1	44	(0)	2674568
18	11.4	0.0	6.8	chr3	125990346	125990389	(72305170)	+	(GCCCC)n	Simple_repeat	1	44	(0)	2677991
555	34.5	5.8	3.2	chr3	127560671	127561107	(70734452)	+	L2a	LINE/L2	2919	3367	(59)	2680264
25	23.9	1.9	5.7	chr3	128052314	128052417	(70243142)	+	(GCGGC)n	Simple_repeat	1	106	(0)	2681126
13	12.6	8.9	2.0	chr3	128052382	128052426	(70243133)	+	(CCGCCGCCG)n	Simple_repeat	1	49	(0)	2681127
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
19	25.0	0.0	0.0	chr3	129160917	129160965	(69134594)	+	(CGCC)n	Simple_repeat	1	49	(0)	2683173
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
2323	10.2	0.0	0.0	chr3	138347599	138347891	(59947668)	C	AluSx	SINE/Alu	(18)	294	2	2697378
3853	14.2	2.0	5.9	chr3	138347892	138347941	(59947618)	+	L1MB7	LINE/L1	6117	6161	(23)	2697377
550	31.5	12.8	1.8	chr3	139344375	139344707	(58950852)	C	L2b	LINE/L2	(1)	3374	3000	2699177
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
32	0.0	0.0	0.0	chr3	161221959	161221988	(37073571)	+	(T)n	Simple_repeat	1	30	(0)	2731018
1349	12.8	2.6	17.8	chr3	179347113	179347471	(18948088)	C	AluJo	SINE/Alu	(1)	311	9	2756042
31	0.0	0.0	0.0	chr3	184174586	184174619	(14120940)	+	(A)n	Simple_repeat	1	34	(0)	2764151
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
387	35.7	7.0	5.9	chr3	188546864	188547119	(9748440)	C	L2c	LINE/L2	(5)	3382	3124	2772085
332	15.5	12.9	5.5	chr3	194985152	194985315	(3310244)	+	LTR50	LTR/ERVL	61	238	(557)	2782182
823	28.4	2.5	1.3	chr3	195621357	195621595	(2673964)	+	MIRb	SINE/MIR	26	267	(1)	2783378
332	30.5	11.6	0.0	chr3	195749119	195749285	(2546274)	+	L1ME4a	LINE/L1	5615	5803	(321)	2783594
826	28.4	2.5	1.3	chr3	195749378	195749616	(2545943)	+	MIRb	SINE/MIR	26	267	(1)	2783595
1547	14.6	4.5	0.3	chr3	195954794	195955088	(2340471)	+	AluJb	SINE/Alu	1	308	(4)	2783934
26	6.3	0.0	0.0	chr3	197298935	197298968	(996591)	+	(TTCA)n	Simple_repeat	1	34	(0)	2786667
273	24.3	15.0	1.5	chr3	197299251	197299363	(996196)	C	MIR3	SINE/MIR	(140)	128	4	2786668
44	27.4	1.6	0.0	chr4	13627443	13627570	(176586985)	+	(CGG)n	Simple_repeat	1	130	(0)	2809599
321	29.3	19.2	0.9	chr4	37802093	37802309	(152412246)	C	MIRb	SINE/MIR	(0)	268	3	2846713
461	30.9	1.4	0.0	chr4	37802423	37802561	(152411994)	+	MIR3	SINE/MIR	62	202	(6)	2846714
12	17.1	2.9	2.8	chr4	53377870	53377904	(136836651)	+	(CGGAG)n	Simple_repeat	1	36	(0)	2867612
300	21.4	14.3	0.0	chr4	83034764	83034847	(107179708)	+	MER5C	DNA/hAT-Charlie	216	313	(0)	2908719
13	29.0	1.5	4.3	chr4	84966951	84967018	(105247537)	+	(CTCCT)n	Simple_repeat	1	69	(0)	2911914
17	27.4	1.4	2.9	chr4	99946256	99946324	(90268231)	+	G-rich	Low_complexity	1	70	(0)	2932375
27	8.8	0.0	0.0	chr4	139666098	139666134	(50548421)	+	(GT)n	Simple_repeat	1	37	(0)	2985077
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
14	7.8	3.5	3.3	chr4	147617772	147617800	(42596755)	+	(GCA)n	Simple_repeat	1	30	(0)	2995897
13	17.4	4.9	2.3	chr4	151761141	151761181	(38453374)	+	GA-rich	Low_complexity	1	43	(0)	3001943
378	19.3	4.3	7.4	chr4	162013325	162013419	(28201136)	+	LTR79	LTR/ERVL	7	98	(429)	3016130
330	21.7	4.5	10.9	chr4	162991378	162991496	(27223059)	+	LTR79	LTR/ERVL	5	115	(412)	3017459
258	30.7	13.8	2.2	chr4	189722548	189722770	(491785)	+	L1M3b	LINE/L1	332	584	(4766)	3054196
1725	14.5	4.8	0.0	chr5	271015	271311	(181266948)	C	AluJb	SINE/Alu	(0)	312	1	3055237
479	33.1	11.7	7.6	chr5	811690	812346	(180725913)	+	L1MC	LINE/L1	4563	5249	(897)	3055718
797	21.5	8.2	0.8	chr5	16466366	16466614	(165071645)	C	MER33	DNA/hAT-Charlie	(13)	311	43	3075039
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
12	23.3	0.0	0.0	chr5	40835471	40835505	(140702754)	+	(TTGCTG)n	Simple_repeat	1	35	(0)	3109515
2106	10.1	1.7	0.0	chr5	43008369	43008655	(138529604)	C	AluSz	SINE/Alu	(20)	292	1	3112397
12	12.0	13.3	0.0	chr5	43065259	43065303	(138472956)	+	A-rich	Low_complexity	1	51	(0)	3112478
22	0.0	0.0	0.0	chr5	65624711	65624734	(115913525)	+	(T)n	Simple_repeat	1	24	(0)	3138133
5843	12.5	0.6	2.2	chr5	71921704	71922611	(109615648)	+	L1MA4A	LINE/L1	6826	7718	(4)	3148241
1597	19.5	3.0	8.1	chr5	71922874	71923258	(109615001)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3148243
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
2550	6.3	0.3	0.0	chr5	79611683	79611982	(101926277)	C	AluSg	SINE/Alu	(9)	301	1	3160093
17	28.8	1.6	1.6	chr5	87267811	87267873	(94270386)	+	(CTCC)n	Simple_repeat	1	64	(0)	3170894
17322	12.6	4.6	2.0	chr5	104062978	104063265	(77474994)	C	L1PB1	LINE/L1	(6560)	303	3	3192262
534	30.2	8.0	1.8	chr5	113845366	113845568	(67692691)	C	LTR16A	LTR/ERVL	(213)	225	6	3204826
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
283	32.7	12.0	1.0	chr5	139439598	139439804	(42098455)	+	MIRc	SINE/MIR	2	234	(34)	3240769
614	28.5	10.3	4.1	chr5	140373289	140373559	(41164700)	C	L2b	LINE/L2	(0)	3375	3086	3242476
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
2619	4.5	0.0	1.3	chr5	140719151	140719463	(40818796)	+	AluY	SINE/Alu	1	309	(2)	3243136
2419	16.1	3.1	2.1	chr5	148550644	148551114	(32987145)	+	LTR45B	LTR/ERV1	14	489	(0)	3256053
204	34.7	8.3	10.9	chr5	149344959	149345307	(32192952)	+	L2b	LINE/L2	2994	3332	(43)	3257530
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
704	25.3	11.3	14.1	chr5	173302817	173303008	(8235251)	+	MLT1K	LTR/ERVL-MaLR	289	478	(117)	3299383
13	24.8	4.2	0.0	chr5	173303047	173303094	(8235165)	+	(TTCC)n	Simple_repeat	1	50	(0)	3299385
12	27.6	4.5	2.9	chr5	173303095	173303108	(8235151)	+	(TTTC)n	Simple_repeat	5	69	(0)	3299386
273	28.6	9.5	0.9	chr5	174292499	174292604	(7245655)	+	LTR79	LTR/ERVL	5	120	(407)	3301225
24	6.8	0.0	0.0	chr5	176352155	176352185	(5186074)	+	(A)n	Simple_repeat	1	31	(0)	3305075
252	23.8	20.5	0.0	chr5	176352279	176352379	(5185880)	C	MIRb	SINE/MIR	(76)	192	66	3305076
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
227	29.4	12.9	7.7	chr5	177607799	177608111	(3930148)	C	MLT1K	LTR/ERVL-MaLR	(139)	456	125	3307722
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
20	0.0	0.0	0.0	chr5	181207444	181207465	(330794)	+	(A)n	Simple_repeat	1	22	(0)	3313852
671	1.3	0.0	0.0	chr5	181207755	181207830	(330429)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	3313853
688	0.0	0.0	0.0	chr5	181218270	181218342	(319917)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313881
660	0.0	0.0	0.0	chr5	181222394	181222467	(315792)	C	tRNA-Val-GTG	tRNA	(2)	74	1	3313890
256	28.9	2.9	7.5	chr6	6583943	6584088	(164221891)	C	LTR91	LTR/ERVL	(0)	199	61	3323604
3595	10.7	4.2	0.6	chr6	6584098	6584605	(164221374)	C	MER1A	DNA/hAT-Charlie	(0)	529	3	3323605
449	22.2	9.0	3.4	chr6	10146821	10146997	(160658982)	C	L1M6	LINE/L1	(5467)	1029	842	3329013
17	16.4	1.9	5.6	chr6	10147020	10147072	(160658907)	+	(CCCTCCA)n	Simple_repeat	1	54	(0)	3329014
262	25.0	12.3	2.0	chr6	10147127	10147201	(160658778)	C	L1M6	LINE/L1	(5962)	534	457	3329013
26	0.0	0.0	0.0	chr6	10147202	10147226	(160658753)	+	(GTTTT)n	Simple_repeat	1	25	(0)	3329015
262	25.0	12.3	2.0	chr6	10147227	10147252	(160658727)	C	L1M6	LINE/L1	(6040)	456	421	3329013
413	27.5	0.6	5.3	chr6	10147268	10147436	(160658543)	+	L1M6	LINE/L1	1597	1757	(4739)	3329009
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
730	22.1	9.5	6.8	chr6	26205551	26205846	(144600133)	+	LOR1b	LTR/ERV1	3	307	(154)	3354820
548	0.0	0.0	21.3	chr6	27020346	27020439	(143785540)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3356155
678	4.8	0.0	0.0	chr6	27230555	27230637	(143575342)	C	tRNA-Leu-TTA	tRNA	(3)	83	1	3356540
748	2.4	0.0	0.0	chr6	27505828	27505909	(143300070)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3357009
626	1.4	0.0	0.0	chr6	27902908	27902978	(142903001)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	3357803
410	28.1	0.8	1.5	chr6	28225034	28225163	(142580816)	+	Charlie13a	DNA/hAT-Charlie	1376	1504	(10)	3358288
317	28.1	15.4	5.0	chr6	30673180	30673381	(140132598)	C	L2a	LINE/L2	(3)	3423	3197	3362001
526	20.5	5.3	5.3	chr6	30691362	30691531	(140114448)	C	LTR106_Mam	LTR	(253)	455	286	3362023
15	16.0	2.9	0.0	chr6	31547391	31547425	(139258554)	+	(CCCTC)n	Simple_repeat	1	36	(0)	3363481
359	30.2	9.2	4.1	chr6	31680745	31681010	(139124969)	C	L2c	LINE/L2	(561)	2858	2578	3363709
16	0.0	0.0	0.0	chr6	31681069	31681086	(139124893)	+	(A)n	Simple_repeat	1	18	(0)	3363710
247	28.0	14.2	2.1	chr6	33454055	33454248	(137351731)	+	MIRb	SINE/MIR	20	253	(15)	3366469
643	24.4	3.5	0.6	chr6	35543504	35543668	(135262311)	+	MER5B	DNA/hAT-Charlie	9	178	(0)	3370615
352	18.5	0.0	0.0	chr6	42563659	42563723	(128242256)	C	L2a	LINE/L2	(24)	3402	3338	3383531
502	28.9	13.6	3.9	chr6	52393647	52394010	(118411969)	C	L2c	LINE/L2	(0)	3387	2983	3398484
22	21.5	3.2	1.5	chr6	75284852	75284927	(95521052)	+	GA-rich	Low_complexity	1	77	(0)	3425988
1350	12.6	17.1	1.6	chr6	75607067	75607312	(95198667)	+	AluJo	SINE/Alu	2	293	(19)	3426473
2397	8.6	1.0	0.0	chr6	75925663	75925964	(94880015)	C	AluSx	SINE/Alu	(7)	305	1	3427043
732	6.2	45.9	3.6	chr6	99394273	99394485	(71411494)	C	AluSx	SINE/Alu	(9)	303	1	3457559
860	17.6	0.0	0.0	chr6	107973553	107973688	(62832291)	C	FLAM_C	SINE/Alu	(7)	136	1	3469692
12	15.4	5.3	2.5	chr6	107973804	107973841	(62832138)	+	GA-rich	Low_complexity	1	40	(0)	3469693
1803	16.2	0.0	3.9	chr6	107973935	107974243	(62831736)	C	AluJb	SINE/Alu	(15)	297	1	3469694
2138	2.1	0.4	0.0	chr6	116668860	116669093	(54136886)	C	AluY	SINE/Alu	(8)	303	69	3482906
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
222	29.6	0.0	0.0	chr6	151658141	151658194	(19147785)	+	L2b	LINE/L2	3312	3365	(10)	3532415
20	0.0	3.7	0.0	chr6	170554089	170554138	(251841)	+	(AAC)n	Simple_repeat	1	51	(0)	3557580
272	36.7	5.0	2.3	chr7	435737	435909	(158910064)	+	MIRb	SINE/MIR	7	184	(84)	3558343
268	29.1	1.6	5.2	chr7	2863770	2863903	(156482070)	C	LTR78B	LTR/ERV1	(10)	1286	1158	3562156
2542	17.6	1.9	1.9	chr7	6709704	6710166	(152635807)	C	LTR45B	LTR/ERV1	(0)	489	27	3569980
18	25.9	0.0	3.2	chr7	6826157	6826219	(152519754)	+	(GCCCCG)n	Simple_repeat	1	63	(0)	3570254
1788	15.2	3.6	0.3	chr7	6826471	6826765	(152519208)	C	AluJb	SINE/Alu	(7)	305	1	3570255
5980	10.7	1.7	1.6	chr7	29235121	29236057	(130109916)	+	L1PA15	LINE/L1	5230	6165	(0)	3601268
2441	5.2	3.3	0.0	chr7	44605714	44606004	(114739969)	C	AluSp	SINE/Alu	(12)	301	1	3624518
270	26.2	2.3	0.0	chr7	44606005	44606088	(114739885)	+	MER104	DNA/TcMar-Tc2	30	115	(66)	3624519
312	31.4	11.3	0.0	chr7	44606156	44606273	(114739700)	+	MIRb	SINE/MIR	136	268	(0)	3624520
220	28.4	2.9	1.5	chr7	56106796	56106863	(103239110)	+	MIR1_Amn	SINE/MIR	63	131	(99)	3639946
518	20.0	15.6	5.3	chr7	66995885	66996015	(92349958)	C	L1MC5a	LINE/L1	(0)	2777	2624	3651289
749	23.2	15.0	6.5	chr7	72829047	72829190	(86516783)	+	L1MC5a	LINE/L1	2626	2776	(1)	3663155
1558	16.7	8.5	9.0	chr7	76108930	76109272	(83236701)	C	MER61A	LTR/ERV1	(0)	341	1	3671351
314	35.2	7.0	0.9	chr7	76109384	76109612	(83236361)	C	L1ME4c	LINE/L1	(259)	571	328	3671352
13	15.5	5.6	0.0	chr7	90403208	90403243	(68942730)	+	(TTTTG)n	Simple_repeat	1	38	(0)	3691026
748	15.0	17.7	0.7	chr7	92447150	92447303	(66898670)	+	MER53	DNA/hAT	3	188	(5)	3693907
225	0.0	0.0	0.0	chr7	92447312	92447336	(66898637)	+	Charlie1b	DNA/hAT-Charlie	495	519	(4)	3693908
1560	17.6	4.9	0.3	chr7	97972529	97972818	(61373155)	C	AluJb	SINE/Alu	(8)	304	1	3701567
1668	15.7	0.0	4.7	chr7	100126513	100126811	(59219162)	+	AluJr	SINE/Alu	1	285	(27)	3705910
2068	13.6	0.0	0.0	chr7	100158873	100159174	(59186799)	+	AluJr	SINE/Alu	1	302	(10)	3705978
29	2.2	5.9	3.7	chr7	100479256	100479306	(58866667)	+	(CTC)n	Simple_repeat	1	54	(0)	3706677
17	30.0	0.0	0.0	chr7	100479352	100479408	(58866565)	+	(CTGCTG)n	Simple_repeat	1	57	(0)	3706678
45	10.8	0.0	0.0	chr7	100889719	100889788	(58456185)	+	(CCTCC)n	Simple_repeat	1	70	(0)	3707582
190	33.3	0.0	0.0	chr7	101217552	101217611	(58128362)	C	MIR3	SINE/MIR	(49)	159	100	3708258
218	25.0	14.0	4.8	chr7	101252159	101252242	(58093731)	+	L2c	LINE/L2	3294	3386	(1)	3708330
1587	18.2	2.6	0.8	chr7	103303149	103303411	(56042562)	C	AluJb	SINE/Alu	(44)	268	1	3712518
12	24.4	2.6	0.0	chr7	112450737	112450775	(46895198)	+	(GGC)n	Simple_repeat	1	40	(0)	3725834
15	21.1	1.9	3.7	chr7	116210745	116210797	(43135176)	+	(GCGCGCG)n	Simple_repeat	1	54	(0)	3730740
393	32.9	15.1	1.4	chr7	116952981	116953196	(42392777)	+	MIR	SINE/MIR	8	258	(4)	3731851
419	10.0	1.6	0.0	chr7	128344082	128344141	(31001832)	+	U7	snRNA	2	62	(1)	3747039
18	23.7	0.0	6.8	chr7	130440761	130440833	(28905140)	+	(GCCCC)n	Simple_repeat	1	73	(0)	3751167
186	26.7	2.2	2.2	chr7	133082431	133082476	(26263497)	C	L2c	LINE/L2	(70)	3317	3272	3755351
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
2343	8.8	0.3	0.0	chr7	139339886	139340182	(20005791)	C	AluSp	SINE/Alu	(15)	298	1	3765382
4089	5.9	1.7	0.4	chr7	154676662	154677185	(4668788)	C	HERV1_LTRd	LTR/ERV1	(4)	531	1	3788600
14	28.9	3.1	1.5	chr8	232275	232339	(144906297)	+	(CCCTGC)n	Simple_repeat	1	67	(0)	3794612
322	2.9	0.0	0.0	chr8	27774167	27774228	(117364408)	C	AluSc	SINE/Alu	(0)	309	247	3834964
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
13	11.3	10.5	0.0	chr8	66613012	66613049	(78525587)	+	(GACCGC)n	Simple_repeat	1	42	(0)	3887699
17	23.1	1.7	3.3	chr8	66613144	66613202	(78525434)	+	(CCCGGC)n	Simple_repeat	1	60	(0)	3887700
14	24.0	5.8	2.7	chr8	66613395	66613463	(78525173)	+	G-rich	Low_complexity	1	73	(0)	3887701
16	28.6	1.4	2.8	chr8	70402238	70402308	(74736328)	+	(GGTGGA)n	Simple_repeat	1	72	(0)	3893734
337	27.9	0.9	0.9	chr8	80084258	80084362	(65054274)	+	MLT1K	LTR/ERVL-MaLR	131	235	(360)	3906983
916	24.1	14.8	5.2	chr8	95112193	95112612	(50026024)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3928219
181	38.8	1.2	0.0	chr8	95112619	95112703	(50025933)	C	MamRTE1	LINE/RTE-BovB	(1398)	2414	2329	3928216
2504	6.0	0.3	0.3	chr8	97775242	97775543	(47363093)	+	AluSq2	SINE/Alu	1	302	(11)	3932411
14	19.2	9.3	0.0	chr8	98045591	98045644	(47092992)	+	(GCGGAA)n	Simple_repeat	1	59	(0)	3932978
1707	13.3	1.3	7.8	chr8	98045693	98046014	(47092622)	+	AluJb	SINE/Alu	1	301	(11)	3932979
29	23.9	1.9	3.7	chr8	98825917	98825935	(46312701)	+	(GGCCGG)n	Simple_repeat	1	50	(57)	3934228
16	19.0	4.5	5.7	chr8	98825936	98826002	(46312634)	+	(GGCG)n	Simple_repeat	1	70	(0)	3934229
29	23.9	1.9	3.7	chr8	98826003	98826021	(46312615)	+	(GGCCGG)n	Simple_repeat	51	107	(0)	3934228
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
250	33.6	4.6	4.6	chr8	99893781	99893911	(45244725)	+	MIR	SINE/MIR	42	172	(90)	3935817
1822	17.0	0.3	1.0	chr8	99905666	99905959	(45232677)	+	AluJr	SINE/Alu	5	296	(16)	3935846
15	9.7	0.0	0.0	chr8	100150590	100150611	(44988025)	+	(AG)n	Simple_repeat	1	22	(0)	3936243
728	19.9	8.6	2.8	chr8	101487657	101487832	(43650804)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	3938852
15	12.0	0.0	0.0	chr8	101492589	101492615	(43646021)	+	(GAGC)n	Simple_repeat	1	27	(0)	3938861
12	32.5	0.0	6.3	chr8	102653750	102653828	(42484808)	+	GA-rich	Low_complexity	1	79	(0)	3940819
13	23.3	4.5	4.3	chr8	102653794	102653859	(42484777)	+	G-rich	Low_complexity	1	69	(0)	3940820
18	19.6	1.8	3.5	chr8	102653859	102653914	(42484722)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	3940821
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
1551	24.9	4.0	3.5	chr8	110542756	110543212	(34595424)	+	MLT2B4	LTR/ERVL	1	478	(42)	3952325
279	33.6	2.8	1.4	chr8	116765683	116765821	(28372815)	C	MIR3	SINE/MIR	(31)	177	37	3960554
189	30.9	11.8	1.0	chr8	116765956	116766053	(28372583)	+	MIRc	SINE/MIR	9	118	(150)	3960555
370	28.7	7.9	6.5	chr8	116836290	116836475	(28302161)	+	MamRep605	LTR?	34	222	(627)	3960699
19	11.6	0.0	0.0	chr8	118622163	118622190	(26516446)	+	(G)n	Simple_repeat	1	28	(0)	3963593
857	26.2	8.5	2.4	chr8	121097235	121097488	(24041148)	C	MLT2F	LTR/ERVL	(8)	655	385	3967692
577	28.0	10.4	1.7	chr8	121097559	121097794	(24040842)	C	MLT2F	LTR/ERVL	(397)	266	8	3967692
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
20	17.9	1.9	1.9	chr8	123241150	123241201	(21897435)	+	G-rich	Low_complexity	1	53	(0)	3971459
2902	11.8	1.4	9.5	chr8	124784310	124784566	(20354070)	C	L1MA2	LINE/L1	(232)	6072	5813	3974334
384	29.7	3.1	8.0	chr8	124784567	124784656	(20353980)	+	MIRb	SINE/MIR	137	228	(40)	3974333
1011	27.5	9.6	0.5	chr8	124784664	124785098	(20353538)	+	LTR79	LTR/ERVL	10	488	(39)	3974336
439	24.3	4.3	2.6	chr8	125563531	125563644	(19574992)	C	LTR79	LTR/ERVL	(371)	156	41	3975909
273	32.7	4.7	1.9	chr8	125563763	125563865	(19574771)	+	L2c	LINE/L2	3256	3361	(14)	3975896
347	25.7	19.5	0.7	chr8	127859698	127859838	(17278798)	+	MIRb	SINE/MIR	16	189	(79)	3980263
265	26.8	1.2	4.7	chr8	129996555	129996640	(15141996)	C	MIRc	SINE/MIR	(108)	160	78	3984134
248	23.9	9.8	5.2	chr8	129996794	129996890	(15141746)	C	MamTip2	DNA/hAT-Tip100	(92)	213	112	3984137
347	23.2	10.4	2.1	chr8	129996893	129996989	(15141647)	C	L2a	LINE/L2	(0)	3426	3321	3984138
61	13.4	4.1	0.8	chr8	129997038	129997158	(15141478)	+	GA-rich	Low_complexity	1	126	(0)	3984139
464	32.6	5.6	2.2	chr8	131890714	131890936	(13247700)	+	LTR79	LTR/ERVL	10	240	(287)	3987590
578	31.4	3.7	2.4	chr8	133390580	133390791	(11747845)	+	MIRb	SINE/MIR	31	245	(23)	3990356
693	28.3	9.0	7.4	chr8	133390924	133391423	(11747213)	+	MLT1J	LTR/ERVL-MaLR	1	509	(3)	3990357
18	13.5	2.2	4.3	chr8	133571802	133571846	(11566790)	+	(CCT)n	Simple_repeat	1	46	(0)	3990738
1240	21.9	3.0	1.8	chr8	142172730	142173064	(2965572)	+	MLT1B	LTR/ERVL-MaLR	26	364	(26)	4004608
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
394	25.5	9.3	3.0	chr8	142718193	142718394	(2420242)	C	LTR50	LTR/ERVL	(554)	241	26	4005222
1916	26.1	10.0	4.8	chr8	142718398	142719005	(2419631)	+	L1MEg	LINE/L1	2295	2948	(3198)	4005219
340	26.3	5.0	8.3	chr8	143281609	143281836	(1856800)	C	LTR50	LTR/ERVL	(509)	286	67	4006009
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
1147	11.3	0.0	1.8	chr8	143684160	143684327	(1454309)	+	AluSx	SINE/Alu	1	165	(147)	4006525
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
15	19.6	0.0	0.0	chr9	7799980	7800008	(130594709)	+	(C)n	Simple_repeat	1	29	(0)	4020246
281	26.8	8.5	1.0	chr9	21802343	21802440	(116592277)	+	MIRb	SINE/MIR	163	268	(0)	4039722
16	13.1	0.0	0.0	chr9	21802470	21802494	(116592223)	+	(A)n	Simple_repeat	1	25	(0)	4039727
17	9.1	2.6	5.0	chr9	37785063	37785101	(100609616)	+	(CCGCTT)n	Simple_repeat	1	40	(0)	4063381
255	29.7	11.9	1.7	chr9	92670393	92670512	(45724205)	+	MIRc	SINE/MIR	37	170	(92)	4117046
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
570	27.1	10.4	13.3	chr9	113775074	113775601	(24619116)	+	MLT1K	LTR/ERVL-MaLR	73	583	(12)	4152361
27	6.0	0.0	0.0	chr9	128371210	128371244	(10023473)	+	(CCCTC)n	Simple_repeat	1	35	(0)	4180370
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
15	17.3	5.2	4.9	chr9	128882181	128882238	(9512479)	+	(CGGC)n	Simple_repeat	1	61	(0)	4181567
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
255	22.9	1.6	1.6	chr9	129488970	129489031	(8905686)	C	MIR3	SINE/MIR	(66)	142	81	4182954
57	0.0	5.1	0.0	chr9	129607459	129607517	(8787200)	+	(GT)n	Simple_repeat	1	62	(0)	4183238
13	20.6	6.8	3.2	chr9	129803226	129803284	(8591433)	+	(GGC)n	Simple_repeat	1	63	(0)	4183683
34	8.7	0.0	0.0	chr9	130579630	130579678	(7815039)	+	(GCG)n	Simple_repeat	1	49	(0)	4185377
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
2254	11.2	0.3	0.0	chrX	1208279	1208583	(154832312)	+	AluSx1	SINE/Alu	3	308	(4)	4360424
251	21.1	6.6	1.4	chrX	9430101	9430172	(146610723)	C	LTR33	LTR/ERVL	(437)	94	19	4374766
6254	9.2	1.4	2.7	chrX	21354635	21355123	(134685772)	+	L1PA11	LINE/L1	7124	7609	(0)	4394362
13	26.0	1.9	1.9	chrX	40735602	40735653	(115305242)	+	G-rich	Low_complexity	1	53	(0)	4422997
2458	8.1	0.3	0.0	chrX	49123933	49124241	(106916654)	C	AluSc8	SINE/Alu	(0)	311	2	4437547
18	4.7	0.0	0.0	chrX	54530146	54530167	(101510728)	+	(C)n	Simple_repeat	1	22	(0)	4446015
13	18.2	4.3	4.1	chrX	70452558	70452604	(85588291)	+	(AGGC)n	Simple_repeat	1	49	(0)	4459700
13	27.4	2.1	0.0	chrX	70452642	70452689	(85588206)	+	(CTCCGG)n	Simple_repeat	1	49	(0)	4459701
18	0.0	0.0	0.0	chrX	72573225	72573244	(83467651)	+	(A)n	Simple_repeat	1	20	(0)	4463580
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
21	21.1	3.2	1.6	chrX	119944004	119944023	(36096872)	+	(TGTA)n	Simple_repeat	1	37	(44)	4522205
22	20.1	4.2	2.7	chrX	129982405	129982476	(26058419)	+	(CTCC)n	Simple_repeat	1	75	(0)	4535724
17	4.9	0.0	0.0	chrX	129982601	129982621	(26058274)	+	(CA)n	Simple_repeat	1	21	(0)	4535725
42	0.0	0.0	2.3	chrX	132218094	132218136	(23822759)	+	(CCCACC)n	Simple_repeat	1	43	(0)	4539076
14	23.5	0.0	7.8	chrX	134915322	134915385	(21125510)	+	G-rich	Low_complexity	1	64	(0)	4543615