16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
657	25.5	10.1	2.9	chr1	3764235	3764581	(245191841)	C	HAL1	LINE/L1	(0)	2507	2133	4323
333	19.2	23.1	6.5	chr1	9938123	9938177	(239018245)	C	L1M5	LINE/L1	(793)	5450	5400	14675
1798	17.0	2.4	0.0	chr1	9938178	9938459	(239017963)	C	AluJo	SINE/Alu	(22)	290	2	14676
510	34.9	4.5	1.0	chr1	16188109	16188290	(232768132)	+	MIRb	SINE/MIR	17	205	(63)	26890
2026	15.6	1.0	0.0	chr1	16188291	16188598	(232767824)	+	AluSz	SINE/Alu	1	311	(1)	26891
1262	15.5	7.1	1.4	chr1	17271651	17271863	(231684559)	+	AluJb	SINE/Alu	87	312	(0)	29056
205	34.3	1.0	4.8	chr1	17271911	17272014	(231684408)	C	L2b	LINE/L2	(173)	3202	3103	29054
2823	8.9	0.8	0.8	chr1	17996752	17997125	(230959297)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	30705
186	26.9	5.6	0.0	chr1	19734104	19734170	(229222252)	C	L2a	LINE/L2	(255)	3120	3050	34348
657	26.0	8.4	0.0	chr1	19734733	19734940	(229221482)	+	MIR	SINE/MIR	3	229	(33)	34352
718	30.8	11.6	2.8	chr1	22857804	22858476	(226097946)	C	L2a	LINE/L2	(0)	3426	2700	41103
1856	14.7	6.1	0.7	chr1	23678161	23678453	(225277969)	+	AluJr	SINE/Alu	1	310	(2)	43078
497	18.4	4.8	20.6	chr1	23678454	23678580	(225277842)	+	MER5A1	DNA/hAT-Charlie	76	166	(0)	43077
197	31.2	13.2	3.1	chr1	23678644	23678772	(225277650)	C	MER5B	DNA/hAT-Charlie	(0)	178	35	43079
544	34.4	4.8	5.6	chr1	24979582	24979878	(223976544)	C	L2b	LINE/L2	(143)	3232	2914	46122
779	18.5	0.0	0.8	chr1	24980125	24980254	(223976168)	C	FLAM_C	SINE/Alu	(10)	133	5	46124
230	28.7	8.5	1.8	chr1	25821143	25821252	(223135170)	C	L2	LINE/L2	(531)	2888	2771	47893
1609	16.7	5.7	0.3	chr1	27304328	27304609	(221651813)	+	AluJo	SINE/Alu	1	298	(14)	51468
12	12.5	0.0	3.6	chr1	27602146	27602173	(221354249)	+	(CCAGC)n	Simple_repeat	1	28	(0)	52099
1888	14.7	0.7	2.3	chr1	28666766	28667072	(220289350)	+	AluJb	SINE/Alu	11	312	(0)	54837
2438	7.3	0.3	0.7	chr1	28667077	28667379	(220289043)	+	AluY	SINE/Alu	1	302	(9)	54838
71	26.8	4.2	3.5	chr1	29148702	29149037	(219807385)	+	(TCCTGC)n	Simple_repeat	1	338	(0)	56026
26	6.3	0.0	0.0	chr1	29149169	29149202	(219807220)	+	(GCTCCG)n	Simple_repeat	1	34	(0)	56027
705	27.9	7.9	1.3	chr1	29304959	29305183	(219651239)	C	MIRb	SINE/MIR	(9)	259	19	56359
348	28.1	8.6	0.8	chr1	29689580	29689708	(219266714)	+	L2b	LINE/L2	3231	3370	(5)	57094
2182	9.1	3.0	2.0	chr1	33028222	33028519	(215927903)	+	AluSp	SINE/Alu	1	301	(12)	64274
3264	17.4	5.3	4.8	chr1	33485891	33486571	(215469851)	C	L1MC1	LINE/L1	(5824)	684	1	65196
2086	12.8	0.0	1.6	chr1	33578309	33578612	(215377810)	+	AluSz	SINE/Alu	14	312	(0)	65337
18	0.0	0.0	0.0	chr1	34175191	34175210	(214781212)	+	(T)n	Simple_repeat	1	20	(0)	66350
510	27.5	15.3	2.2	chr1	34903090	34903405	(214053017)	+	L2c	LINE/L2	3004	3368	(19)	67639
2062	11.9	3.0	0.3	chr1	35101107	35101400	(213855022)	C	AluSx1	SINE/Alu	(10)	302	1	68042
1039	18.6	1.5	0.5	chr1	35231449	35231648	(213724774)	C	L1MB2	LINE/L1	(50)	6121	5920	68318
28	0.0	0.0	0.0	chr1	35231696	35231722	(213724700)	+	(TGTTT)n	Simple_repeat	1	27	(0)	68319
1807	14.8	0.8	0.4	chr1	35231723	35231981	(213724441)	C	AluSx1	SINE/Alu	(31)	281	21	68320
3196	21.1	4.7	8.3	chr1	35278720	35280084	(213676338)	C	MLT1C-int	LTR/ERVL-MaLR	(103)	1386	44	68443
846	22.2	4.8	0.0	chr1	35915796	35915975	(213040447)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	69756
1751	14.8	1.7	2.4	chr1	37485012	37485309	(211471113)	+	AluJo	SINE/Alu	1	296	(16)	72820
296	24.5	14.8	2.7	chr1	38681094	38681239	(210275183)	+	MIR3	SINE/MIR	15	178	(30)	75139
228	25.0	1.4	14.3	chr1	38765421	38765504	(210190918)	C	L2c	LINE/L2	(0)	3387	3315	75289
7609	12.6	3.2	2.5	chr1	38968601	38969498	(209986924)	C	Tigger2	DNA/TcMar-Tigger	(664)	2054	1144	75738
1145	28.1	9.4	1.4	chr1	39538376	39538984	(209417438)	C	L2a	LINE/L2	(14)	3412	2745	76885
3311	10.8	2.2	0.4	chr1	42248724	42249239	(206707183)	C	L1PA8	LINE/L1	(0)	6172	5658	82172
23088	9.9	1.6	0.5	chr1	42894460	42900794	(206055628)	C	L1PB1	LINE/L1	(185)	6682	268	83336
872	24.8	7.5	1.5	chr1	43782818	43783079	(205173343)	+	MER46C	DNA/TcMar-Tigger	59	337	(1)	84925
417	31.2	2.1	1.4	chr1	43783087	43783226	(205173196)	C	MIRb	SINE/MIR	(117)	151	11	84926
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
1568	10.9	10.6	4.4	chr1	46143783	46143978	(202812444)	C	L1MA4A	LINE/L1	(112)	6191	5965	89420
344	33.2	10.2	4.0	chr1	46144036	46144283	(202812139)	+	MLT1O	LTR/ERVL-MaLR	97	361	(181)	89422
232	38.2	5.5	0.0	chr1	46432733	46432834	(202523588)	C	MIR	SINE/MIR	(153)	109	2	90037
297	31.5	3.6	0.9	chr1	46433234	46433342	(202523080)	+	MIR3	SINE/MIR	91	202	(6)	90038
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
2265	8.0	0.3	0.7	chr1	47536202	47536490	(201419932)	+	AluSc	SINE/Alu	1	288	(21)	91817
223	30.1	10.6	0.0	chr1	48512412	48512504	(200443918)	C	MIRc	SINE/MIR	(77)	191	88	93430
262	29.0	0.0	0.0	chr1	48512539	48512607	(200443815)	+	MIRb	SINE/MIR	26	94	(174)	93431
1616	26.9	4.0	1.3	chr1	48512608	48513071	(200443351)	+	LTR16C	LTR/ERVL	11	487	(2)	93432
193	29.5	11.2	3.1	chr1	50318356	50318440	(198637982)	+	MIRb	SINE/MIR	81	174	(94)	96566
1005	24.1	5.9	3.9	chr1	51068410	51068690	(197887732)	+	L2a	LINE/L2	2703	2989	(430)	97879
2285	11.7	1.6	0.3	chr1	51068852	51069159	(197887263)	C	AluSz	SINE/Alu	(0)	312	1	97880
507	25.9	8.3	0.7	chr1	51544046	51544189	(197412233)	C	MIRc	SINE/MIR	(3)	265	110	98897
687	20.7	0.0	10.3	chr1	51544215	51544359	(197412063)	+	FLAM_A	SINE/Alu	1	130	(12)	98898
478	29.8	10.5	3.3	chr1	51657343	51657554	(197298868)	C	MIRb	SINE/MIR	(39)	229	1	99200
1897	19.3	0.3	0.7	chr1	52205068	52205373	(196751049)	C	AluJb	SINE/Alu	(6)	306	2	100393
1858	15.1	3.4	3.7	chr1	52205374	52205671	(196750751)	C	AluJr4	SINE/Alu	(15)	297	1	100394
8167	15.1	6.2	3.6	chr1	52205672	52205789	(196750633)	C	L1MC1	LINE/L1	(6383)	125	2	100383
480	29.1	8.5	3.1	chr1	52650335	52650563	(196305859)	+	MIRb	SINE/MIR	16	260	(8)	101356
2652	20.5	3.9	5.2	chr1	52751896	52752524	(196203898)	C	MER21C	LTR/ERVL	(3)	935	316	101653
1230	20.4	9.4	3.9	chr1	52752530	52752840	(196203582)	+	MER21C	LTR/ERVL	595	924	(14)	101652
2052	13.3	0.0	2.3	chr1	52752846	52753145	(196203277)	C	AluSg	SINE/Alu	(17)	293	1	101654
721	27.9	16.0	6.3	chr1	52931029	52931533	(196024889)	+	HAL1	LINE/L1	5	567	(1940)	102116
397	33.9	11.1	5.5	chr1	54549315	54549748	(194406674)	+	L2b	LINE/L2	2912	3372	(3)	105348
580	24.9	14.8	2.8	chr1	54715147	54715633	(194240789)	+	L2b	LINE/L2	2808	3373	(2)	105732
364	26.5	9.1	1.7	chr1	55209182	55209354	(193747068)	C	Tigger15a	DNA/TcMar-Tigger	(16)	699	513	106633
411	28.5	8.3	10.3	chr1	55209454	55209821	(193746601)	C	Tigger15a	DNA/TcMar-Tigger	(339)	376	17	106633
775	22.9	5.4	2.1	chr1	55660061	55660305	(193296117)	+	MIRb	SINE/MIR	19	264	(4)	107514
17765	16.4	7.7	1.4	chr1	55779896	55783183	(193173239)	C	ERVL-int	LTR/ERVL	(0)	5757	2244	107702
352	38.2	8.0	2.1	chr1	55947435	55947870	(193008552)	+	L2	LINE/L2	2476	2939	(480)	107925
21135	10.1	1.1	0.6	chr1	56012813	56016966	(192939456)	+	L1PREC2	LINE/L1	3982	8154	(1)	108038
479	29.4	3.4	2.9	chr1	56285280	56285454	(192670968)	C	MIRb	SINE/MIR	(71)	197	22	108533
296	25.8	1.9	4.7	chr1	56444251	56444356	(192512066)	C	MIRb	SINE/MIR	(40)	228	126	108832
997	24.2	7.4	4.1	chr1	58639332	58639645	(190316777)	+	LTR16	LTR/ERVL	107	431	(7)	113230
380	30.6	9.8	0.6	chr1	58849621	58849778	(190106644)	C	MIRb	SINE/MIR	(60)	208	35	113656
11	21.1	2.9	0.0	chr1	58849804	58849837	(190106585)	+	(CTCTTC)n	Simple_repeat	1	35	(0)	113657
1268	26.8	4.0	1.6	chr1	59019642	59020005	(189936417)	+	LTR33	LTR/ERVL	13	385	(130)	114015
2023	18.2	12.3	4.4	chr1	59095708	59096184	(189860238)	+	MLT2B1	LTR/ERVL	1	520	(0)	114189
231	32.5	12.9	1.6	chr1	59096225	59096527	(189859895)	C	L2a	LINE/L2	(166)	3260	2919	114190
1280	25.1	10.6	2.7	chr1	60388048	60388453	(188567969)	C	LTR16A1	LTR/ERVL	(7)	449	8	116467
22	13.4	0.0	0.0	chr1	60416274	60416307	(188540115)	+	(AC)n	Simple_repeat	1	34	(0)	116517
8034	12.3	1.5	0.2	chr1	60480739	60481938	(188474484)	C	HSMAR2	DNA/TcMar-Mariner	(86)	1216	2	116608
2094	17.3	0.3	0.6	chr1	60521033	60521398	(188435024)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	116657
559	24.0	11.3	6.7	chr1	61647375	61647584	(187308838)	+	MER2	DNA/TcMar-Tigger	2	222	(123)	118505
779	18.2	0.8	0.0	chr1	61647682	61647813	(187308609)	+	MER2B	DNA/TcMar-Tigger	201	333	(3)	118506
402	30.1	13.7	1.2	chr1	61647857	61648031	(187308391)	C	L2c	LINE/L2	(188)	3199	2999	118503
23089	6.0	1.8	0.2	chr1	62180580	62183445	(186772977)	C	HERVK14-int	LTR/ERVK	(3184)	2912	1	119662
462	32.6	7.3	1.3	chr1	63877267	63877496	(185078926)	+	MIRb	SINE/MIR	20	264	(4)	122870
683	28.6	4.9	10.0	chr1	63902684	63903201	(185053221)	C	MLT1J	LTR/ERVL-MaLR	(19)	493	4	122917
410	34.7	6.6	0.9	chr1	63921665	63921879	(185034543)	+	MIRc	SINE/MIR	2	229	(39)	122947
283	29.1	7.6	0.8	chr1	64883927	64884048	(184072374)	+	L2c	LINE/L2	3228	3362	(13)	124655
561	34.1	7.8	5.0	chr1	64884517	64884939	(184071483)	+	L2b	LINE/L2	2913	3348	(27)	124656
711	30.6	5.7	2.2	chr1	65425562	65425885	(183530537)	C	L2c	LINE/L2	(0)	3387	3052	125767
809	32.4	11.7	3.3	chr1	65425894	65426716	(183529706)	C	L2a	LINE/L2	(0)	3426	2516	125768
1729	16.9	4.2	0.7	chr1	65658328	65658622	(183297800)	+	AluJb	SINE/Alu	2	307	(5)	126100
12	19.5	2.9	0.0	chr1	65658759	65658793	(183297629)	+	A-rich	Low_complexity	1	36	(0)	126101
1564	26.9	14.4	3.0	chr1	66894290	66895195	(182061227)	C	L1M5	LINE/L1	(748)	5398	4363	127938
1215	23.3	4.6	4.3	chr1	66895196	66895496	(182060926)	+	AluJb	SINE/Alu	1	302	(0)	127939
1619	23.5	13.3	4.1	chr1	66895497	66896294	(182060128)	C	L1M5	LINE/L1	(1784)	4362	3376	127938
1647	24.9	6.7	1.8	chr1	67065071	67065570	(181890852)	+	L2a	LINE/L2	2481	3006	(413)	128167
288	25.0	18.2	4.6	chr1	67065589	67065739	(181890683)	C	LTR50	LTR/ERVL	(404)	391	216	128168
439	28.3	0.6	16.2	chr1	67065756	67065953	(181890469)	+	L2a	LINE/L2	2989	3155	(271)	128167
2343	21.7	3.2	0.2	chr1	67065955	67066536	(181889886)	+	L1MD	LINE/L1	4464	5063	(1083)	128169
785	28.0	1.4	1.4	chr1	68107400	68107613	(180848809)	+	MIRb	SINE/MIR	15	228	(40)	130087
574	30.5	3.8	3.4	chr1	68107644	68107877	(180848545)	C	MIRb	SINE/MIR	(7)	261	27	130088
548	33.8	6.3	1.0	chr1	68448007	68448215	(180508207)	C	MIRb	SINE/MIR	(1)	267	47	130674
313	31.8	6.1	1.8	chr1	68448321	68448429	(180507993)	C	L2b	LINE/L2	(12)	3363	3250	130675
1852	20.5	7.1	8.3	chr1	69013216	69013742	(179942680)	+	MLT2B1	LTR/ERVL	1	520	(0)	131449
2345	13.1	1.2	1.0	chr1	69339273	69339633	(179616789)	+	THE1B	LTR/ERVL-MaLR	3	432	(0)	131898
8148	11.9	3.7	0.1	chr1	69339634	69341139	(179615283)	+	THE1B-int	LTR/ERVL-MaLR	20	1580	(0)	131898
432	33.3	1.0	8.9	chr1	69436524	69436747	(179519675)	+	MIR	SINE/MIR	13	218	(44)	132012
16	27.1	0.0	0.0	chr1	69449143	69449185	(179507237)	+	(TACA)n	Simple_repeat	1	43	(0)	132028
298	33.5	2.6	13.3	chr1	69449269	69449549	(179506873)	+	L2c	LINE/L2	3136	3411	(15)	132029
1863	19.0	4.2	3.0	chr1	69724942	69725370	(179231052)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	1	132385
920	33.5	13.8	3.9	chr1	71815924	71816330	(177140092)	+	L2	LINE/L2	1056	1515	(1904)	135388
2386	14.3	0.3	0.0	chr1	71816331	71816693	(177139729)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	135389
619	31.6	13.9	8.0	chr1	72732066	72732769	(176223653)	C	L1M4a1	LINE/L1	(1445)	1134	382	136578
462	29.2	4.7	4.7	chr1	72732771	72732982	(176223440)	C	L1M4a1	LINE/L1	(2355)	224	13	136578
14	21.2	0.0	2.5	chr1	72800120	72800159	(176156263)	+	A-rich	Low_complexity	1	40	(0)	136667
2038	11.6	0.0	0.8	chr1	72800373	72800639	(176155783)	+	AluSq2	SINE/Alu	1	265	(48)	136668
242	26.4	1.4	1.4	chr1	73769805	73769877	(175186545)	+	MER52D	LTR/ERV1	7	79	(2044)	137780
6759	16.6	11.9	2.1	chr1	73770358	73771842	(175184580)	+	MER52D	LTR/ERV1	471	2121	(2)	137781
937	14.0	0.6	9.9	chr1	73861118	73861308	(175095114)	C	MLT2B2	LTR/ERVL	(0)	562	390	137904
185	31.3	11.8	7.0	chr1	73861328	73861547	(175094875)	+	L2c	LINE/L2	2970	3186	(201)	137905
2041	16.4	10.2	1.6	chr1	73861571	73861953	(175094469)	C	MSTA	LTR/ERVL-MaLR	(0)	428	9	137906
333	29.7	12.9	0.0	chr1	73861962	73862116	(175094306)	+	L2c	LINE/L2	3205	3382	(5)	137905
5738	13.1	3.0	1.2	chr1	74941207	74941606	(174014816)	C	L1MA5A	LINE/L1	(805)	5492	5085	139332
14966	20.0	4.2	3.2	chr1	75360470	75364180	(173592242)	C	L1MA7	LINE/L1	(1162)	6400	2635	139854
2328	10.9	4.7	2.2	chr1	76446582	76446936	(172509486)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	141469
11353	8.4	1.8	1.2	chr1	76446937	76448506	(172507916)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	141469
2052	14.7	0.7	0.0	chr1	76794250	76794541	(172161881)	C	AluJb	SINE/Alu	(18)	294	1	141957
745	35.1	8.4	2.2	chr1	78449243	78449696	(170506726)	+	L2	LINE/L2	2249	2733	(686)	144608
13452	14.6	3.0	2.1	chr1	80103107	80105412	(168851010)	C	Tigger1	DNA/TcMar-Tigger	(90)	2328	1	146732
1082	13.2	0.0	0.6	chr1	84907261	84907427	(164048995)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	153295
12	21.8	2.7	0.0	chr1	84907464	84907500	(164048922)	+	(GAGCT)n	Simple_repeat	1	38	(0)	153296
723	17.3	6.0	0.6	chr1	85092057	85092213	(163864209)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	153594
205	34.5	1.1	1.1	chr1	86615829	86615919	(162340503)	C	L2b	LINE/L2	(0)	3426	3336	155854
13	19.7	0.0	6.5	chr1	86615942	86615987	(162340435)	+	(AGAT)n	Simple_repeat	1	46	(0)	155855
305	33.1	12.9	3.9	chr1	86616010	86616335	(162340087)	C	L2b	LINE/L2	(177)	3210	2857	155854
199	33.6	11.5	2.0	chr1	86942822	86942970	(162013452)	+	L2	LINE/L2	2470	2634	(785)	156368
18	17.4	1.8	5.2	chr1	86943034	86943090	(162013332)	+	A-rich	Low_complexity	1	58	(0)	156369
3221	13.1	3.2	1.4	chr1	91766607	91767124	(157189298)	+	LTR26B	LTR/ERV1	1	528	(3)	163209
441	30.1	5.2	6.3	chr1	92669923	92670269	(156286153)	+	L1M5	LINE/L1	5420	5762	(362)	164848
4473	26.7	13.5	2.5	chr1	92670270	92671804	(156284618)	+	L2a	LINE/L2	945	2684	(735)	164849
1088	15.4	1.0	4.3	chr1	93072091	93072272	(155884150)	C	L1MB5	LINE/L1	(0)	6174	5998	165656
1996	14.4	13.6	1.9	chr1	93072273	93072648	(155883774)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	165657
1088	15.4	1.0	4.3	chr1	93072649	93072675	(155883747)	C	L1MB5	LINE/L1	(177)	5997	5972	165656
3209	8.8	5.3	9.7	chr1	93072682	93072748	(155883674)	+	Tigger1	DNA/TcMar-Tigger	1821	1888	(530)	165658
2321	11.0	0.0	0.0	chr1	93072749	93073049	(155883373)	+	AluSz	SINE/Alu	1	301	(11)	165659
27207	4.5	0.3	0.6	chr1	93509601	93511684	(155444738)	+	L1PA3	LINE/L1	127	2216	(3939)	166436
254	24.8	11.0	2.8	chr1	93863813	93863920	(155092502)	+	L2b	LINE/L2	3254	3371	(4)	166949
2149	14.7	0.0	0.0	chr1	94390291	94390602	(154565820)	C	AluSx	SINE/Alu	(0)	312	1	167710
2326	34.5	5.8	4.5	chr1	94390603	94391257	(154565165)	C	ERVL-E-int	LTR/ERVL	(3394)	2273	1603	167709
1273	17.5	10.3	4.8	chr1	94547081	94547411	(154409011)	+	MLT1A0	LTR/ERVL-MaLR	15	365	(0)	167948
40	0.0	0.0	0.0	chr1	95685320	95685353	(153271069)	+	(GT)n	Simple_repeat	1	34	(0)	169679
30	5.5	2.6	0.0	chr1	95685423	95685460	(153270962)	+	(AC)n	Simple_repeat	1	39	(0)	169680
1888	16.7	3.4	4.9	chr1	96203754	96204144	(152752278)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	6	170346
1728	22.0	2.6	3.1	chr1	99239573	99239961	(149716461)	+	L1M4b	LINE/L1	3	389	(6478)	174570
253	34.6	5.1	3.3	chr1	99239963	99240174	(149716248)	+	HAL1ME	LINE/L1	11	226	(2239)	174571
2273	15.1	1.1	0.5	chr1	99334799	99335165	(149621257)	C	Tigger2a	DNA/TcMar-Tigger	(40)	394	26	174699
331	30.5	14.9	2.5	chr1	99335216	99335501	(149620921)	C	L1M5	LINE/L1	(1481)	4665	4338	174700
511	22.1	2.2	3.5	chr1	99491963	99492103	(149464319)	+	Tigger19a	DNA/TcMar-Tigger	111	249	(74)	174907
2674	15.2	4.3	1.6	chr1	99570403	99570962	(149385460)	+	L1MDa	LINE/L1	5563	6134	(499)	175018
773	25.4	4.3	0.5	chr1	99860714	99860915	(149095507)	+	MER63A	DNA/hAT-Blackjack	1	210	(0)	175501
2240	12.2	0.3	1.0	chr1	100406642	100406952	(148549470)	+	AluSq2	SINE/Alu	1	309	(4)	176530
9184	8.4	0.2	1.1	chr1	100406953	100407754	(148548668)	C	L1PA11	LINE/L1	(1247)	4899	4100	176529
2448	8.8	1.6	0.0	chr1	100435547	100435853	(148520569)	+	AluSq2	SINE/Alu	1	312	(1)	176582
330	30.4	3.7	6.0	chr1	100435859	100436026	(148520396)	C	L2c	LINE/L2	(1524)	1895	1732	176578
498	32.9	16.7	4.0	chr1	100654926	100655874	(148300548)	C	L2c	LINE/L2	(520)	2899	1806	176864
1974	16.9	0.0	1.3	chr1	100746185	100746497	(148209925)	+	AluJb	SINE/Alu	1	309	(3)	176992
46	13.1	5.2	1.0	chr1	100746499	100746595	(148209827)	+	A-rich	Low_complexity	1	102	(0)	176993
1449	31.6	10.3	2.9	chr1	100924978	100925901	(148030521)	C	L2a	LINE/L2	(127)	3299	2294	177224
2111	15.7	10.2	1.9	chr1	100951788	100952202	(148004220)	+	MLT1D	LTR/ERVL-MaLR	8	460	(45)	177257
227	29.2	15.4	4.9	chr1	101682632	101682793	(147273629)	+	MamGypLTR3	LTR/Gypsy	629	810	(84)	178356
1656	18.4	7.4	3.2	chr1	101712456	101712803	(147243619)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	178404
357	36.6	10.6	3.2	chr1	101819159	101819683	(147136739)	C	L2	LINE/L2	(337)	3082	2515	178531
413	32.7	10.1	1.4	chr1	101819752	101819959	(147136463)	+	MIRb	SINE/MIR	23	250	(18)	178532
3710	25.4	8.8	2.8	chr1	104442815	104444195	(144512227)	C	L1MEc	LINE/L1	(4500)	1900	412	181708
12265	13.3	1.0	2.5	chr1	104599375	104601416	(144355006)	+	HERVH-int	LTR/ERV1	3140	5149	(2564)	181865
310	20.0	0.0	0.0	chr1	106232258	106232307	(142724115)	+	LTR22E	LTR/ERVK	458	507	(0)	183804
1934	23.2	1.8	2.0	chr1	106232310	106232709	(142723713)	C	L1M1	LINE/L1	(6681)	884	486	183805
10465	11.2	0.7	1.9	chr1	106869505	106871995	(142084427)	C	L1PA13	LINE/L1	(19)	6144	3682	184613
8976	12.8	2.0	1.0	chr1	106871995	106872641	(142083781)	+	L1P3	LINE/L1	2189	2840	(3306)	184614
436	30.2	8.2	3.1	chr1	106945030	106945237	(142011185)	+	L2c	LINE/L2	3195	3387	(0)	184706
2160	12.9	0.8	15.4	chr1	106945265	106945704	(142010718)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	184707
241	31.0	0.9	2.6	chr1	107632617	107632732	(141323690)	C	MER124	DNA?	(211)	186	73	185721
264	33.4	2.8	0.9	chr1	107982680	107982811	(140973611)	+	MIR3	SINE/MIR	9	143	(125)	186172
841	33.0	8.7	3.1	chr1	108539375	108539947	(140416475)	+	L2b	LINE/L2	2776	3375	(0)	186891
8484	5.9	0.5	0.4	chr1	108539963	108541032	(140415390)	+	MER11C	LTR/ERVK	1	1071	(0)	186892
448	35.9	3.6	1.9	chr1	109225603	109225818	(139730604)	C	MIRc	SINE/MIR	(2)	266	47	188266
1154	15.7	7.3	3.0	chr1	109225994	109226190	(139730232)	C	AluJo	SINE/Alu	(13)	299	94	188267
490	27.5	11.4	9.5	chr1	110323568	110324181	(138632241)	C	L2c	LINE/L2	(0)	3387	2663	189930
1816	15.9	2.1	3.4	chr1	110358048	110358342	(138598080)	+	AluSq	SINE/Alu	1	291	(22)	189988
448	34.2	14.3	1.4	chr1	110680383	110680795	(138275627)	+	L2c	LINE/L2	2365	2839	(580)	190566
1577	12.8	3.7	8.2	chr1	111079750	111080089	(137876333)	C	L1MA7	LINE/L1	(2)	6289	5966	191079
4084	18.8	4.2	1.0	chr1	111080090	111080951	(137875471)	C	L1M2	LINE/L1	(1282)	4861	3972	191080
931	22.5	1.9	3.2	chr1	112145712	112145927	(136810495)	+	MER20	DNA/hAT-Charlie	1	213	(6)	192643
414	24.8	2.9	0.0	chr1	112145968	112146068	(136810354)	C	MER5A	DNA/hAT-Charlie	(1)	188	85	192644
458	26.8	8.4	1.8	chr1	112321757	112321923	(136634499)	+	LTR79	LTR/ERVL	67	245	(282)	192877
14	14.2	0.0	8.7	chr1	112322154	112322199	(136634223)	+	GA-rich	Low_complexity	1	46	(0)	192878
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
32	0.0	0.0	0.0	chr1	113027683	113027712	(135928710)	+	(CTGAGGG)n	Simple_repeat	1	30	(0)	194309
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
388	25.6	4.0	6.9	chr1	116487393	116487522	(132468900)	C	MLT1J	LTR/ERVL-MaLR	(384)	128	3	199776
448	36.2	10.9	1.4	chr1	116487699	116488376	(132468046)	+	L2b	LINE/L2	2615	3371	(4)	199777
378	33.5	16.1	1.5	chr1	117094732	117095259	(131861163)	C	L2c	LINE/L2	(82)	3305	2698	200747
1133	14.8	2.7	1.1	chr1	117512335	117512519	(131443903)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	201415
13	35.2	0.0	3.9	chr1	121396747	121396824	(127559598)	+	(CGC)n	Simple_repeat	1	78	(0)	207015
15	23.3	3.4	3.3	chr1	121417024	121417082	(127539340)	+	(TCC)n	Simple_repeat	1	61	(0)	207035
14	24.9	2.0	2.0	chr1	143497092	143497140	(105459282)	+	(CCG)n	Simple_repeat	1	50	(0)	207918
1989	26.5	3.2	4.4	chr1	147414437	147415029	(101541393)	C	MLT1E2	LTR/ERVL-MaLR	(21)	606	21	214045
373	25.9	3.4	0.0	chr1	147415233	147415317	(101541105)	C	MIR3	SINE/MIR	(10)	198	111	214046
14	28.0	0.0	4.9	chr1	147908988	147909048	(101047374)	+	GA-rich	Low_complexity	1	61	(0)	214828
363	32.2	8.4	5.8	chr1	150026536	150026917	(98929505)	+	MLT1K	LTR/ERVL-MaLR	187	579	(16)	218174
23	25.1	0.0	0.0	chr1	150027083	150027141	(98929281)	+	(GTATT)n	Simple_repeat	1	59	(0)	218175
308	31.1	7.8	0.2	chr1	150027160	150027281	(98929141)	C	L2c	LINE/L2	(27)	3360	3219	218176
2128	13.5	0.0	0.7	chr1	150027305	150027600	(98928822)	+	AluSx3	SINE/Alu	2	295	(16)	218177
818	27.5	7.7	4.1	chr1	153169994	153170467	(95785955)	+	MamRep1151	LTR?	197	694	(15)	223681
306	37.1	2.0	2.0	chr1	153306636	153306781	(95649641)	+	MIRc	SINE/MIR	93	238	(30)	223892
1737	19.2	0.7	0.3	chr1	154236205	154236496	(94719926)	C	AluJo	SINE/Alu	(16)	296	4	225744
315	30.3	16.4	1.6	chr1	155228117	155228267	(93728155)	C	L2a	LINE/L2	(10)	3377	3208	227581
2226	10.7	0.0	0.0	chr1	156110694	156110983	(92845439)	+	AluSx1	SINE/Alu	1	290	(22)	229514
305	24.3	7.0	5.2	chr1	156110984	156111123	(92845299)	C	L2c	LINE/L2	(26)	3361	3209	229512
2266	11.0	0.7	0.0	chr1	156111169	156111467	(92844955)	+	AluSq2	SINE/Alu	1	301	(12)	229515
2041	11.9	4.7	0.3	chr1	156204489	156204773	(92751649)	C	AluSq2	SINE/Alu	(15)	298	1	229696
2348	10.3	0.0	0.0	chr1	156788968	156789269	(92167153)	C	AluSx1	SINE/Alu	(10)	302	1	230767
908	16.6	1.2	0.1	chr1	156789270	156789355	(92167067)	C	L1MD3	LINE/L1	(2499)	5496	5467	230768
2374	9.3	0.7	0.0	chr1	157096639	157096948	(91859474)	+	AluSp	SINE/Alu	1	312	(1)	231269
384	31.8	16.3	4.8	chr1	157097031	157097190	(91859232)	+	L2c	LINE/L2	2910	3058	(329)	231268
1213	29.7	9.7	4.3	chr1	159674587	159675842	(89280580)	+	HAL1	LINE/L1	822	2152	(355)	234576
853	20.9	5.7	3.3	chr1	160500001	160500242	(88456180)	+	L1ME3A	LINE/L1	5921	6168	(5)	235858
1337	26.5	11.7	2.2	chr1	160500255	160500771	(88455651)	+	L2a	LINE/L2	2870	3425	(1)	235859
2203	11.8	0.0	1.0	chr1	160616874	160617177	(88339245)	+	AluSx	SINE/Alu	1	301	(11)	236009
2652	25.4	2.7	5.1	chr1	160617178	160617769	(88338653)	+	L1ME3	LINE/L1	5514	6077	(85)	236007
2396	10.7	0.0	0.0	chr1	161418309	161418616	(87537806)	C	AluSz	SINE/Alu	(4)	308	1	237507
23	12.5	0.0	4.2	chr1	161418617	161418626	(87537796)	+	(ATAC)n	Simple_repeat	2	10	(0)	237508
461	14.7	1.6	0.0	chr1	161418896	161418990	(87537432)	C	FLAM_C	SINE/Alu	(0)	133	35	237509
5626	14.7	2.0	4.0	chr1	164098327	164099524	(84856898)	C	L1MA9	LINE/L1	(0)	7731	6556	241641
7298	18.4	3.0	0.9	chr1	165094429	165096183	(83860239)	+	L1MA6	LINE/L1	1239	3028	(4537)	243092
2156	16.3	0.3	4.0	chr1	167190801	167191178	(81765244)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	246296
2398	9.5	0.0	3.8	chr1	168336716	168337055	(80619367)	C	THE1A	LTR/ERVL-MaLR	(28)	327	1	248234
639	28.7	4.4	1.0	chr1	168836215	168836411	(80120011)	+	MIRc	SINE/MIR	51	254	(14)	249024
2264	10.5	0.0	0.0	chr1	168874599	168874883	(80081539)	C	AluSx1	SINE/Alu	(27)	285	1	249081
198	36.2	12.5	0.0	chr1	168874884	168874988	(80081434)	C	L2c	LINE/L2	(67)	3320	3201	249082
217	24.9	0.6	11.9	chr1	168874965	168875090	(80081332)	+	MIR	SINE/MIR	81	200	(30)	249083
2610	12.4	3.2	2.6	chr1	169961570	169961999	(78994423)	+	Tigger2a	DNA/TcMar-Tigger	2	434	(0)	250690
1412	20.5	3.4	2.0	chr1	172365949	172366241	(76590181)	+	AluJr4	SINE/Alu	2	298	(14)	254144
16	9.7	2.9	2.8	chr1	172366280	172366314	(76590108)	+	A-rich	Low_complexity	1	36	(0)	254145
24672	6.7	0.9	0.4	chr1	172591275	172597414	(76359008)	C	L1PA5	LINE/L1	(2)	6152	4	254427
310	28.3	11.7	3.8	chr1	172597489	172597737	(76358685)	C	L1MD	LINE/L1	(1847)	4299	4011	254428
207	37.0	0.0	0.0	chr1	173714496	173714568	(75241854)	+	L2c	LINE/L2	3296	3368	(19)	255988
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
2092	9.6	0.0	0.4	chr1	174165189	174165449	(74790973)	C	AluSx1	SINE/Alu	(52)	260	1	256822
203	27.4	0.9	17.5	chr1	174165473	174165494	(74790928)	C	L2c	LINE/L2	(245)	3142	3125	256823
1751	17.1	1.0	1.6	chr1	174165495	174165798	(74790624)	C	AluJo	SINE/Alu	(10)	302	1	256824
203	27.4	0.9	17.5	chr1	174165799	174165912	(74790510)	C	L2c	LINE/L2	(263)	3124	3029	256823
2422	24.4	7.5	4.4	chr1	174262753	174263476	(74692946)	+	LTR41B	LTR/ERVL	5	752	(6)	256981
1861	16.3	3.8	1.2	chr1	175558779	175559108	(73397314)	+	L1MC1	LINE/L1	5995	6333	(0)	258862
671	18.5	4.8	1.1	chr1	175559152	175559331	(73397091)	+	L1MB7	LINE/L1	5997	6183	(1)	258863
710	25.0	3.0	2.2	chr1	175559376	175559845	(73396577)	C	L1ME3C	LINE/L1	(65)	6177	5633	258864
11121	16.8	1.3	4.4	chr1	176714389	176716227	(72240195)	+	MER66-int	LTR/ERV1	4608	6405	(271)	260591
378	31.2	2.9	8.9	chr1	177682438	177682729	(71273693)	C	X8_LINE	LINE/CR1	(22)	274	1	261961
455	18.7	7.4	16.7	chr1	178189963	178190142	(70766280)	+	MER20	DNA/hAT-Charlie	54	215	(4)	262727
2037	14.8	3.6	4.4	chr1	178974628	178974994	(69981428)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	263937
2216	27.9	11.0	5.7	chr1	178974995	178975539	(69980883)	+	L1MA4	LINE/L1	19	599	(6966)	263938
2462	8.7	0.0	0.3	chr1	179069361	179069671	(69886751)	C	AluSx1	SINE/Alu	(2)	310	1	264090
1408	23.7	13.9	14.3	chr1	179069672	179069727	(69886695)	C	LTR41B	LTR/ERVL	(697)	61	7	264088
1373	19.5	11.9	6.4	chr1	179069986	179070035	(69886387)	C	MSTD	LTR/ERVL-MaLR	(0)	396	351	264091
20	8.0	0.0	0.0	chr1	180361265	180361291	(68595131)	+	(T)n	Simple_repeat	1	27	(0)	266259
1143	23.1	7.6	11.9	chr1	182186662	182187049	(66769373)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	268977
570	29.0	5.9	1.3	chr1	183963178	183963404	(64993018)	+	MIR	SINE/MIR	6	243	(19)	271899
767	20.6	0.0	0.0	chr1	185263808	185263953	(63692469)	C	MLT1B	LTR/ERVL-MaLR	(244)	146	1	273984
201	34.3	10.3	7.2	chr1	186735991	186736364	(62220058)	+	L2c	LINE/L2	3001	3387	(0)	276017
915	34.1	5.7	6.3	chr1	187554372	187555136	(61401286)	C	L2a	LINE/L2	(3)	3423	2662	277190
15	13.9	0.0	0.0	chr1	187555257	187555280	(61401142)	+	(T)n	Simple_repeat	1	24	(0)	277191
613	32.1	11.9	4.0	chr1	189219368	189219746	(59736676)	C	L2a	LINE/L2	(0)	3426	3014	279281
3911	17.0	3.0	1.0	chr1	189219792	189220486	(59735936)	C	MER50	LTR/ERV1	(23)	711	3	279282
2458	10.5	0.6	4.2	chr1	189475331	189475545	(59480877)	C	THE1B	LTR/ERVL-MaLR	(0)	364	164	279601
2053	11.6	3.4	1.7	chr1	189475546	189475838	(59480584)	+	AluYm1	SINE/Alu	2	299	(12)	279602
198	30.7	8.3	1.1	chr1	190416392	190416480	(58539942)	+	L2a	LINE/L2	3313	3408	(18)	280867
1885	16.0	3.9	3.6	chr1	191122844	191123206	(57833216)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	281758
186	40.5	2.5	3.2	chr1	193314739	193314819	(55641603)	C	L2b	LINE/L2	(85)	3290	3214	284688
18	15.5	0.0	0.0	chr1	193314966	193314995	(55641427)	+	A-rich	Low_complexity	1	30	(0)	284691
2157	13.1	3.6	3.0	chr1	193476797	193477158	(55479264)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	284923
2045	13.8	6.6	1.7	chr1	193503638	193503983	(55452439)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	284957
1275	26.4	9.7	3.3	chr1	193503984	193504705	(55451717)	+	L1MEd	LINE/L1	2059	2837	(3309)	284956
1847	13.3	7.1	10.8	chr1	193990385	193990763	(54965659)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	285555
14036	18.2	3.7	4.0	chr1	193990764	193991525	(54964897)	+	L1MA4	LINE/L1	3706	4461	(3101)	285554
30	31.8	2.8	2.1	chr1	194031634	194031774	(54924648)	+	(TTC)n	Simple_repeat	1	145	(0)	285598
1453	32.8	4.7	9.0	chr1	194103698	194104493	(54851929)	C	L1PB4	LINE/L1	(6093)	1241	490	285703
36	0.0	0.0	0.0	chr1	194104494	194104526	(54851896)	+	(GCA)n	Simple_repeat	1	33	(0)	285707
1497	29.7	0.9	3.0	chr1	194104527	194105013	(54851409)	C	L1PB4	LINE/L1	(6210)	1124	716	285703
1481	11.2	22.3	0.0	chr1	195485855	195486087	(53470335)	+	AluSq2	SINE/Alu	1	300	(13)	287491
1634	18.0	2.3	7.0	chr1	195486088	195486306	(53470116)	C	MER61A	LTR/ERV1	(129)	212	1	287489
3105	14.3	0.6	0.2	chr1	195486321	195486811	(53469611)	C	LOR1a	LTR/ERV1	(4)	493	1	287492
287	23.5	0.0	1.4	chr1	195598851	195598919	(53357503)	+	LTR80B	LTR/ERVL	255	322	(262)	287603
468	33.0	4.2	5.3	chr1	195598920	195599204	(53357218)	+	LTR80B	LTR/ERVL	286	567	(17)	287603
11	9.7	8.6	2.6	chr1	195599285	195599319	(53357103)	+	(AATCATA)n	Simple_repeat	1	38	(0)	287607
1143	19.0	7.9	4.9	chr1	195954125	195954429	(53001993)	+	MLT1A0	LTR/ERVL-MaLR	1	315	(50)	288057
1110	25.2	3.2	3.8	chr1	199270613	199270930	(49685492)	C	MLT1E1A	LTR/ERVL-MaLR	(3)	677	362	292297
294	28.6	5.5	1.8	chr1	199271041	199271160	(49685262)	C	MLT1E1A	LTR/ERVL-MaLR	(383)	186	58	292297
565	24.2	14.1	0.0	chr1	199613357	199613509	(49342913)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	292749
295	23.7	0.0	0.4	chr1	201417973	201418036	(47538386)	+	MER58C	DNA/hAT-Charlie	1	62	(162)	295974
19	0.0	0.0	0.0	chr1	201418045	201418065	(47538357)	+	(T)n	Simple_repeat	1	21	(0)	295975
198	31.6	6.5	5.3	chr1	201744567	201744761	(47211661)	C	L2b	LINE/L2	(115)	3260	3072	296566
1828	27.0	20.7	1.4	chr1	204417461	204418214	(44538208)	+	L2c	LINE/L2	941	1830	(1589)	301508
370	28.8	11.2	3.7	chr1	205589204	205589469	(43366953)	C	L2c	LINE/L2	(258)	3129	2835	303738
314	28.4	6.8	0.0	chr1	206544355	206544463	(42411959)	+	L2	LINE/L2	2825	2941	(478)	305273
509	25.5	4.7	4.7	chr1	206620615	206620717	(42335705)	+	MIRb	SINE/MIR	165	267	(1)	305417
455	28.3	8.1	1.9	chr1	207297674	207297835	(41658587)	+	MIRb	SINE/MIR	10	182	(86)	306442
8263	8.4	2.1	1.5	chr1	208445387	208446123	(40510299)	C	L1PB3	LINE/L1	(5268)	1594	846	308158
1271	8.2	0.0	0.0	chr1	208446128	208446309	(40510113)	C	L1PB3	LINE/L1	(6428)	434	253	308158
1925	17.4	4.9	1.6	chr1	209443097	209443297	(39513125)	+	MLT1B	LTR/ERVL-MaLR	178	390	(0)	309655
568	31.0	5.2	0.4	chr1	209549255	209549494	(39406928)	C	MIR	SINE/MIR	(0)	262	11	309813
203	30.1	12.0	1.0	chr1	209550069	209550172	(39406250)	+	UCON132b	DNA/hAT-Tip100	26	142	(6)	309814
320	29.3	7.0	2.2	chr1	210952377	210952512	(38003910)	C	L2c	LINE/L2	(2)	3385	3243	311922
11957	8.6	0.8	0.6	chr1	211040208	211040285	(37916137)	+	THE1A-int	LTR/ERVL-MaLR	1507	1580	(0)	312022
2413	8.8	3.7	1.2	chr1	211040286	211040631	(37915791)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	312022
871	30.8	14.3	2.5	chr1	211040745	211041338	(37915084)	+	L2c	LINE/L2	1471	2146	(1273)	312025
6115	26.5	10.7	2.5	chr1	212080948	212083050	(36873372)	C	L2a	LINE/L2	(4)	3422	1116	313875
15	19.6	0.0	0.0	chr1	213278882	213278910	(35677512)	+	(T)n	Simple_repeat	1	29	(0)	315953
15789	12.8	1.4	1.7	chr1	213667274	213669696	(35286726)	C	Tigger1	DNA/TcMar-Tigger	(1)	2417	3	316588
2067	13.5	5.3	0.0	chr1	214523314	214523632	(34432790)	+	Tigger3a	DNA/TcMar-Tigger	3	339	(9)	317832
2366	10.6	0.0	0.0	chr1	214523848	214524148	(34432274)	C	AluSx	SINE/Alu	(10)	302	2	317833
2756	32.9	10.6	1.9	chr1	215676791	215678682	(33277740)	+	L2b	LINE/L2	1183	3305	(121)	319397
600	30.4	2.5	4.6	chr1	216913555	216913795	(32042627)	+	MIRc	SINE/MIR	31	266	(2)	320965
472	34.9	11.2	2.2	chr1	216980274	216981014	(31975408)	+	L2b	LINE/L2	2351	3157	(218)	321062
424	36.8	11.9	2.0	chr1	217182220	217182940	(31773482)	C	L2c	LINE/L2	(42)	3345	2546	321360
517	30.9	3.9	6.5	chr1	217334394	217334656	(31621766)	+	AmnSINE1	SINE/5S-Deu-L2	121	376	(199)	321576
709	23.7	9.8	2.6	chr1	218264681	218264953	(30691469)	+	MamGypLTR1a	LTR/Gypsy	10	304	(480)	322967
12023	8.8	0.1	0.0	chr1	219070746	219072323	(29884099)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	324136
2102	13.9	4.7	2.5	chr1	219072325	219072679	(29883743)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	324136
3889	18.0	6.1	1.2	chr1	219072680	219072938	(29883484)	+	L1MB7	LINE/L1	5871	6152	(32)	324135
2264	10.5	0.7	0.0	chr1	221633180	221633475	(27322947)	C	AluSz	SINE/Alu	(14)	298	1	327938
2431	8.2	0.3	0.0	chr1	222846210	222846502	(26109920)	+	AluSp	SINE/Alu	1	294	(19)	329790
1996	15.4	0.7	0.0	chr1	224238028	224238332	(24718090)	C	AluJb	SINE/Alu	(5)	307	1	332116
2103	9.7	1.4	0.4	chr1	225997849	225998126	(22958296)	+	AluSq2	SINE/Alu	1	281	(32)	334982
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
1613	19.7	1.0	2.7	chr1	227027837	227028135	(21928287)	+	AluJr	SINE/Alu	3	296	(16)	336822
3066	13.9	7.5	4.0	chr1	227188441	227189047	(21767375)	+	L1MC1	LINE/L1	5879	6508	(0)	337048
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
2711	20.0	0.8	1.7	chr1	227409372	227409894	(21546528)	C	Ricksha_c	DNA/MULE-MuDR	(1140)	908	391	337472
256	17.1	0.0	0.0	chr1	227409895	227409935	(21546487)	C	MLT2B5	LTR/ERVL	(674)	43	3	337473
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
865	31.2	5.3	4.9	chr1	228968880	228969307	(19987115)	C	L1ME3A	LINE/L1	(5638)	604	175	339474
1265	24.9	5.1	5.3	chr1	229020718	229021188	(19935234)	C	L1MC5	LINE/L1	(0)	9304	8835	339572
15	5.5	0.0	0.0	chr1	231409242	231409260	(17547162)	+	(A)n	Simple_repeat	1	19	(0)	343450
380	33.5	8.2	5.1	chr1	231409261	231409496	(17546926)	+	L2c	LINE/L2	3144	3387	(0)	343451
1953	17.2	0.0	0.0	chr1	232459510	232459812	(16496610)	C	AluJb	SINE/Alu	(9)	303	1	344971
588	26.9	7.7	1.0	chr1	232459853	232460047	(16496375)	C	MIRb	SINE/MIR	(34)	234	26	344972
323	17.3	6.2	0.0	chr1	232817850	232817924	(16138498)	C	L1ME3Cz	LINE/L1	(8)	989	910	345485
755	25.6	7.5	0.4	chr1	232818091	232818337	(16138085)	C	L1ME3Cz	LINE/L1	(488)	509	244	345485
1790	29.4	8.7	4.1	chr1	233560624	233561335	(15395087)	+	L1MA5	LINE/L1	409	1156	(6410)	346592
11801	18.7	4.1	1.2	chr1	233561428	233565368	(15391054)	+	L1MA5	LINE/L1	2076	6141	(1421)	346592
696	10.9	0.0	0.0	chr1	234345664	234345764	(14610658)	+	MER34	LTR/ERV1	12	112	(430)	347706
529	18.3	1.2	0.0	chr1	234345772	234345853	(14610569)	C	AluJr	SINE/Alu	(229)	83	1	347707
1908	17.6	8.2	0.2	chr1	234345854	234346256	(14610166)	+	MER34	LTR/ERV1	103	540	(2)	347706
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
8930	9.1	8.3	14.2	chr1	237308483	237310167	(11646255)	C	LTR12C	LTR/ERV1	(0)	1579	3	353104
3534	9.2	1.0	1.6	chr1	237310168	237310191	(11646231)	+	MER41C	LTR/ERV1	501	521	(0)	353103
367	29.0	0.0	3.6	chr1	237310268	237310301	(11646121)	+	Charlie7	DNA/hAT-Charlie	40	72	(2540)	353105
2988	9.2	4.7	0.9	chr1	237310302	237310748	(11645674)	+	MER4C	LTR/ERV1	1	465	(0)	353106
927	19.5	0.0	1.3	chr1	237366407	237366565	(11589857)	C	AluJr	SINE/Alu	(19)	293	137	353181
1989	13.0	1.4	0.7	chr1	239660601	239660885	(9295537)	+	AluSz6	SINE/Alu	1	287	(25)	356468
2304	9.4	2.0	0.0	chr1	240113282	240113579	(8842843)	+	AluSx	SINE/Alu	1	304	(8)	357168
15	0.0	5.3	0.0	chr1	240800549	240800567	(8155855)	+	(CA)n	Simple_repeat	1	20	(0)	358287
1876	18.8	7.6	3.7	chr1	242801971	242802488	(6153934)	C	LTR55	LTR/ERVL?	(8)	540	1	361549
2892	21.2	11.7	0.3	chr1	243546709	243547471	(5408951)	C	MER63C	DNA/hAT-Blackjack	(68)	862	1	362744
2019	14.1	3.0	0.3	chr1	243832978	243833274	(5123148)	+	AluSx	SINE/Alu	1	305	(7)	363142
2028	13.1	6.0	3.2	chr1	243833275	243833602	(5122820)	C	THE1D	LTR/ERVL-MaLR	(39)	342	1	363143
325	16.7	2.7	7.7	chr1	243833603	243833615	(5122807)	C	Tigger3a	DNA/TcMar-Tigger	(336)	12	2	363140
501	20.7	0.2	2.7	chr1	243833617	243833777	(5122645)	+	L1MEb	LINE/L1	1609	1738	(4677)	363139
1189	13.2	0.0	0.0	chr1	244935527	244935685	(4020737)	+	AluSx	SINE/Alu	1	159	(153)	365100
326	15.3	0.0	0.0	chr1	244935687	244935749	(4020673)	C	FLAM_C	SINE/Alu	(85)	48	1	365101
4095	15.0	4.1	2.1	chr1	244990473	244990656	(3965766)	C	L1MC3	LINE/L1	(752)	7033	6853	365234
817	18.1	7.7	2.5	chr1	244990660	244990819	(3965603)	C	AluSz	SINE/Alu	(23)	289	121	365236
19	7.2	0.0	0.0	chr1	244990827	244990855	(3965567)	+	(TAC)n	Simple_repeat	1	29	(0)	365237
2073	24.3	5.6	6.7	chr1	244990865	244991478	(3964944)	C	MER21C	LTR/ERVL	(27)	911	305	365238
911	26.2	6.8	8.2	chr10	706157	706787	(133090635)	C	L1MEg	LINE/L1	(1318)	4828	4208	371757
2095	11.0	8.0	1.8	chr10	2420606	2420946	(131376476)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	373715
515	32.5	3.8	3.2	chr10	2420947	2421043	(131376379)	C	MamRep605	LTR?	(439)	410	314	373714
1480	28.0	9.3	1.9	chr10	2664296	2665286	(131132136)	+	L1MDa	LINE/L1	44	1206	(5427)	374018
4128	17.7	1.4	1.1	chr10	4557081	4557822	(129239600)	C	L1PA13	LINE/L1	(4939)	1846	1103	376642
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
14	4.9	0.0	0.0	chr10	10701624	10701644	(123095778)	+	(GTT)n	Simple_repeat	1	21	(0)	385964
195	31.3	9.8	1.2	chr10	10701753	10701836	(123095586)	+	MIR1_Amn	SINE/MIR	44	135	(95)	385965
3094	21.1	7.2	3.1	chr10	14617912	14618449	(119178973)	C	L1ME1	LINE/L1	(6)	6173	5615	392751
26658	8.2	1.0	0.4	chr10	16167828	16171514	(117625908)	C	HERVL-int	LTR/ERVL	(1944)	3710	1	395352
1002	27.7	8.6	10.2	chr10	16735907	16738164	(117059258)	+	L1MB8	LINE/L1	149	3211	(3108)	396308
2415	10.5	0.3	0.0	chr10	16997154	16997449	(116799973)	+	AluSc8	SINE/Alu	1	297	(14)	396683
1514	29.6	16.0	5.2	chr10	17590975	17591495	(116205927)	C	MER115	DNA/hAT-Tip100	(94)	599	9	397692
2760	15.6	2.9	1.0	chr10	19843561	19844078	(113953344)	+	L1MA4A	LINE/L1	5774	6301	(2)	401196
1591	25.3	13.1	2.0	chr10	20625124	20625288	(113172134)	C	L1MC5a	LINE/L1	(1875)	902	736	402300
1810	17.0	4.7	2.8	chr10	20625289	20625645	(113171777)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	402301
1591	25.3	13.1	2.0	chr10	20625646	20626278	(113171144)	C	L1MC5a	LINE/L1	(2042)	735	3	402300
2388	12.1	1.9	1.6	chr10	21183745	21184107	(112613315)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	403096
18	4.7	0.0	0.0	chr10	21511170	21511191	(112286231)	+	(A)n	Simple_repeat	1	22	(0)	403853
5983	8.6	0.7	0.0	chr10	22145141	22145904	(111651518)	+	HERV9-int	LTR/ERV1	7668	8436	(0)	404839
3494	8.7	0.8	14.9	chr10	22145905	22146509	(111650913)	+	LTR12F	LTR/ERV1	1	519	(0)	404839
4123	18.4	2.6	2.0	chr10	23969335	23969797	(109827625)	C	L1MB8	LINE/L1	(564)	5614	5144	407743
2022	14.0	7.7	3.5	chr10	23969798	23970145	(109827277)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	407745
3333	31.7	11.9	2.9	chr10	25750668	25752313	(108045109)	C	L2a	LINE/L2	(139)	3287	1466	410608
2255	15.7	1.9	1.4	chr10	25752314	25752675	(108044747)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	410610
3333	32.0	12.2	2.4	chr10	25752676	25753050	(108044372)	C	L2a	LINE/L2	(1954)	1465	1047	410608
436	26.2	7.0	1.4	chr10	28094391	28094537	(105702885)	+	MIR	SINE/MIR	102	257	(5)	414459
349	23.4	8.2	5.3	chr10	28154170	28154300	(105643122)	C	L1MEd	LINE/L1	(6608)	478	344	414547
397	28.1	2.4	0.0	chr10	28484036	28484156	(105313266)	+	MER113	DNA/hAT-Charlie	65	188	(333)	415210
14	15.7	0.0	5.1	chr10	28484157	28484195	(105313227)	+	GA-rich	Low_complexity	1	39	(0)	415211
2401	11.1	3.9	0.3	chr10	28484246	28484596	(105312826)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	415212
44	4.4	0.0	0.0	chr10	30544107	30544153	(103253269)	+	(TC)n	Simple_repeat	1	47	(0)	418939
866	28.3	0.4	4.8	chr10	32165090	32165338	(101632084)	+	LTR33	LTR/ERVL	14	251	(264)	421449
476	21.9	2.6	1.7	chr10	32165398	32165513	(101631909)	+	MER5B	DNA/hAT-Charlie	56	172	(6)	421450
2263	9.8	0.3	0.0	chr10	32165533	32165828	(101631594)	C	AluSp	SINE/Alu	(15)	298	2	421451
349	17.8	2.5	0.8	chr10	35658585	35658668	(98138754)	C	L1MEi	LINE/L1	(677)	1535	1464	426901
278	28.5	10.6	0.0	chr10	35658919	35659062	(98138360)	C	L1ME3Cz	LINE/L1	(6899)	204	44	426893
463	30.4	9.2	5.6	chr10	38081360	38081860	(95715562)	C	HSATI	Satellite	(13)	564	44	430528
16	9.7	0.0	0.0	chr10	42177080	42177101	(91620321)	+	(C)n	Simple_repeat	1	22	(0)	431774
13	26.2	4.5	2.9	chr10	42243469	42243535	(91553887)	+	(GCC)n	Simple_repeat	1	70	(0)	431874
1329	9.6	0.0	2.2	chr10	42384725	42384902	(91412520)	+	AluYi6_4d	SINE/Alu	108	281	(30)	432026
23285	8.9	2.7	1.4	chr10	42384907	42385886	(91411536)	C	HERVFH19-int	LTR/ERV1	(754)	6965	5994	432027
4273	17.4	4.7	2.0	chr10	43931845	43932887	(89864535)	C	L1MB3	LINE/L1	(3)	6180	5108	434295
13	15.5	0.0	3.2	chr10	47403118	47403148	(86394274)	+	GA-rich	Low_complexity	1	31	(0)	439130
12	16.4	0.0	7.5	chr10	48215727	48215766	(85581656)	+	(GAAGCA)n	Simple_repeat	1	40	(0)	440254
1498	18.8	5.5	5.8	chr10	48215822	48216209	(85581213)	+	MLT2B4	LTR/ERVL	164	524	(52)	440255
329	24.2	5.9	0.0	chr10	48816987	48817081	(84980341)	+	MIR	SINE/MIR	141	241	(21)	441079
807	26.9	13.8	3.4	chr10	49001253	49001699	(84795723)	C	L2a	LINE/L2	(3)	3423	2923	441307
3589	23.9	7.1	0.8	chr10	49059720	49061166	(84736256)	C	L1ME1	LINE/L1	(13)	6557	5006	441384
11464	9.3	1.1	0.6	chr10	50349893	50351463	(83445959)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	443224
2324	12.3	1.4	0.3	chr10	50351464	50351814	(83445608)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	443224
515	32.1	7.3	1.6	chr10	53783270	53783462	(80013960)	+	FordPrefect_a	DNA/hAT-Tip100	67	271	(237)	448046
1185	34.3	9.2	6.3	chr10	55712206	55714124	(78083298)	C	ERV3-16A3_I-int	LTR/ERVL	(2296)	2930	951	450523
241	30.5	10.7	2.3	chr10	59033789	59033959	(74763463)	+	LTR88c	LTR/Gypsy?	193	379	(483)	454975
2441	9.0	0.0	0.0	chr10	60149708	60150008	(73647414)	C	AluSx1	SINE/Alu	(11)	301	1	456655
5375	25.8	8.1	8.3	chr10	60652914	60653587	(73143835)	C	L1M4a1	LINE/L1	(738)	5599	4844	457380
1226	25.8	12.3	4.2	chr10	60899651	60900438	(72896984)	C	L2a	LINE/L2	(2)	3424	2541	457793
182	34.6	4.4	11.1	chr10	62202076	62202319	(71595103)	C	L3	LINE/CR1	(219)	3880	3654	459717
22	0.0	0.0	0.0	chr10	64034183	64034206	(69763216)	+	(T)n	Simple_repeat	1	24	(0)	462787
287	29.5	13.2	6.5	chr10	64034508	64035009	(69762413)	+	MamGypLTR2c	LTR/Gypsy	344	1052	(16)	462788
2357	12.2	1.3	1.9	chr10	66515549	66515925	(67281497)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	466200
9326	16.4	4.0	0.9	chr10	67363404	67366370	(66431052)	+	L1PA6	LINE/L1	3087	6154	(0)	467372
20861	14.2	4.0	2.4	chr10	67439674	67442791	(66354631)	+	L1M1	LINE/L1	798	3980	(3585)	467455
737	21.4	4.3	0.0	chr10	68133385	68133538	(65663884)	C	Arthur1A	DNA/hAT-Tip100	(12)	165	5	468580
343	29.1	8.3	3.4	chr10	68133542	68133747	(65663675)	+	HAL1ME	LINE/L1	176	392	(2073)	468578
890	13.7	0.0	0.7	chr10	73633447	73633585	(60163837)	+	FLAM_C	SINE/Alu	1	138	(5)	479689
339	23.9	12.4	2.6	chr10	73633614	73633729	(60163693)	C	MIRc	SINE/MIR	(135)	133	5	479690
2461	5.8	0.0	1.4	chr10	73642616	73642909	(60154513)	C	AluY	SINE/Alu	(1)	310	21	479708
1923	18.7	0.0	0.3	chr10	73643175	73643479	(60153943)	C	AluJb	SINE/Alu	(7)	305	2	479709
15	9.1	0.0	0.0	chr10	75058420	75058443	(58738979)	+	(TCC)n	Simple_repeat	1	24	(0)	482333
623	26.0	4.8	1.6	chr10	75380213	75380434	(58416988)	C	MIR	SINE/MIR	(6)	262	28	483011
3417	6.5	3.8	0.0	chr10	75620844	75621199	(58176223)	C	L1PB1	LINE/L1	(1)	6150	5778	483373
2178	14.8	2.9	1.8	chr10	76157740	76158082	(57639340)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	1	484124
679	29.5	12.9	2.7	chr10	76277456	76277905	(57519517)	C	HAL1b	LINE/L1	(1508)	913	411	484288
371	25.0	9.7	5.9	chr10	77708166	77708254	(56089168)	+	MIRb	SINE/MIR	145	239	(29)	486449
2326	10.5	5.0	0.6	chr10	77708255	77708617	(56088805)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	486451
371	25.0	9.7	5.9	chr10	77708618	77708646	(56088776)	+	MIRb	SINE/MIR	240	268	(0)	486449
559	26.2	8.6	0.6	chr10	78405130	78405290	(55392132)	C	MIRb	SINE/MIR	(45)	223	49	487742
214	35.0	16.0	2.4	chr10	78405316	78405482	(55391940)	+	MamTip2	DNA/hAT-Tip100	49	242	(63)	487743
591	28.5	1.5	2.5	chr10	79385327	79385524	(54411898)	C	MIR3	SINE/MIR	(8)	200	5	489519
2305	14.6	7.0	3.7	chr10	79545534	79545961	(54251461)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	15	489829
409	16.2	0.0	0.0	chr10	79545963	79546030	(54251392)	+	MER81	DNA/hAT-Blackjack	46	113	(1)	489830
390	33.5	4.9	3.9	chr10	79546031	79546313	(54251109)	C	HAL1	LINE/L1	(1629)	878	593	489831
13721	8.4	0.6	0.1	chr10	80095914	80097782	(53699640)	C	L1PA7	LINE/L1	(1039)	5107	3229	490634
1197	20.4	0.5	0.0	chr10	80475285	80475495	(53321927)	+	AluJb	SINE/Alu	1	212	(100)	491281
2217	9.6	0.0	0.0	chr10	80475592	80475884	(53321538)	C	AluSg7	SINE/Alu	(16)	293	1	491282
13	14.4	3.2	0.0	chr10	81968037	81968067	(51829355)	+	(TTAGTT)n	Simple_repeat	1	32	(0)	493297
314	14.3	0.0	0.0	chr10	84157873	84157914	(49639508)	C	AluYk11	SINE/Alu	(269)	42	1	496414
287	23.2	0.0	4.2	chr10	84157915	84157983	(49639439)	C	MLT1A	LTR/ERVL-MaLR	(132)	242	177	496413
482	30.1	6.6	2.0	chr10	84358234	84358477	(49438945)	C	MamRep137	DNA/TcMar-Tigger	(184)	326	71	496759
4498	12.0	2.0	1.0	chr10	85532547	85533230	(48264192)	+	LTR8	LTR/ERV1	1	691	(0)	498253
370	27.9	1.8	0.5	chr10	85919701	85919833	(47877589)	+	MIRb	SINE/MIR	4	145	(123)	498706
13718	12.8	4.7	5.9	chr10	87523620	87525139	(46272283)	C	Tigger1	DNA/TcMar-Tigger	(960)	1458	1	501419
22	23.8	5.3	5.0	chr10	89707516	89707629	(44089793)	+	(TTCCC)n	Simple_repeat	1	120	(0)	504855
1893	27.0	5.8	1.7	chr10	89707630	89708214	(44089208)	C	L1ME2	LINE/L1	(1954)	4192	3575	504853
978	19.8	1.1	0.6	chr10	91253812	91253989	(42543433)	C	MER58A	DNA/hAT-Charlie	(26)	198	20	507056
369	24.4	4.2	4.2	chr10	93961943	93962062	(39835360)	C	MER5A	DNA/hAT-Charlie	(20)	169	50	512105
253	27.0	7.4	4.2	chr10	93961947	93962089	(39835333)	+	MER5A	DNA/hAT-Charlie	36	183	(6)	512105
430	18.1	1.4	0.0	chr10	93962140	93962211	(39835211)	C	MSTB	LTR/ERVL-MaLR	(353)	73	1	512106
285	22.9	1.5	0.5	chr10	93962240	93962314	(39835108)	+	L2b	LINE/L2	3312	3425	(1)	512107
248	34.3	5.0	10.2	chr10	94022893	94023207	(39774215)	C	L2c	LINE/L2	(14)	3373	3076	512216
776	19.9	0.0	2.3	chr10	94443314	94443444	(39353978)	C	FLAM_A	SINE/Alu	(14)	128	1	513000
2470	23.4	3.3	1.2	chr10	94443515	94443887	(39353535)	+	MER119	DNA/hAT-Charlie	1	376	(207)	513001
2807	16.6	2.0	5.4	chr10	94998221	94998809	(38798613)	C	LTR10A	LTR/ERV1	(21)	612	1	513703
209	32.9	3.4	4.0	chr10	95280885	95281061	(38516361)	+	MER5B	DNA/hAT-Charlie	1	176	(2)	514012
1512	19.4	4.9	1.4	chr10	95281296	95281588	(38515834)	+	AluJr	SINE/Alu	1	304	(8)	514013
13	8.5	4.0	0.0	chr10	95559771	95559795	(38237627)	+	(TCC)n	Simple_repeat	1	26	(0)	514498
15	20.0	0.0	0.0	chr10	95560067	95560095	(38237327)	+	G-rich	Low_complexity	1	29	(0)	514499
13	28.0	0.0	4.9	chr10	101032740	101032800	(32764622)	+	(TGTG)n	Simple_repeat	1	61	(0)	524363
646	25.5	3.7	5.2	chr10	103961236	103961467	(29835955)	+	MIRb	SINE/MIR	2	225	(43)	529978
1578	14.9	10.9	0.0	chr10	103961481	103961749	(29835673)	C	AluJr	SINE/Alu	(10)	302	1	529979
2643	17.8	7.1	0.0	chr10	104379028	104379550	(29417872)	C	L1MB5	LINE/L1	(9)	6165	5603	530614
1670	23.4	2.7	0.3	chr10	104566746	104567101	(29230321)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	530924
632	33.3	5.2	6.9	chr10	106236367	106236580	(27560842)	+	MamGypLTR1a	LTR/Gypsy	18	226	(558)	533415
1654	16.9	7.4	4.8	chr10	106236581	106236934	(27560488)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	533416
418	31.5	10.5	2.7	chr10	107562305	107562488	(26234934)	+	MIRc	SINE/MIR	14	224	(44)	535431
415	25.6	5.6	0.0	chr10	107562563	107562679	(26234743)	+	MER45A	DNA/hAT-Tip100	55	178	(0)	535432
231	39.8	5.5	2.8	chr10	108377513	108377618	(25419804)	C	L2b	LINE/L2	(30)	3345	3237	536516
542	26.5	10.4	7.4	chr10	108377650	108377772	(25419650)	C	LTR16A	LTR/ERVL	(9)	442	315	536517
2418	12.3	1.8	0.3	chr10	108377773	108378147	(25419275)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	536518
1671	19.0	7.3	1.1	chr10	108556261	108556617	(25240805)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	536771
6059	16.5	6.7	0.1	chr10	108556619	108557851	(25239571)	+	L1MC1	LINE/L1	2401	3721	(2600)	536768
300	31.7	7.1	12.4	chr10	108597928	108598156	(25199266)	+	L2c	LINE/L2	2644	2860	(559)	536829
2805	14.0	7.6	0.4	chr10	108598249	108598736	(25198686)	+	LTR22B1	LTR/ERVK	1	526	(0)	536832
2214	12.3	1.7	0.8	chr10	109621270	109621621	(24175801)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	538203
318	21.3	0.0	0.0	chr10	110278574	110278648	(23518774)	C	MADE2	DNA/TcMar-Mariner	(5)	75	1	539211
31	0.0	0.0	0.0	chr10	110278702	110278728	(23518694)	+	(GT)n	Simple_repeat	1	27	(0)	539212
422	23.3	2.2	10.1	chr10	110589359	110589566	(23207856)	C	L1ME1	LINE/L1	(58)	6121	5945	539822
330	28.6	1.0	1.0	chr10	110802852	110802950	(22994472)	+	MIRc	SINE/MIR	45	143	(125)	540179
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
13	16.6	2.2	6.4	chr10	113286381	113286426	(20510996)	+	(CTGGCCC)n	Simple_repeat	1	47	(0)	544059
1302	24.6	4.6	0.6	chr10	117624622	117624973	(16172449)	C	L1ME3A	LINE/L1	(979)	5167	4801	550781
2144	12.7	4.7	1.4	chr10	117625182	117625548	(16171874)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	550782
732	22.5	12.6	0.5	chr10	117625558	117625767	(16171655)	C	MIR	SINE/MIR	(21)	241	3	550783
365	31.8	4.3	1.3	chr10	117763629	117763784	(16033638)	+	MIRb	SINE/MIR	19	179	(89)	551037
272	31.4	5.9	5.5	chr10	117763846	117764207	(16033215)	+	L2b	LINE/L2	3050	3413	(13)	551038
202	23.3	11.2	3.7	chr10	117764204	117764310	(16033112)	+	MIRb	SINE/MIR	84	199	(69)	551039
2684	4.3	0.0	0.0	chr10	120528070	120528373	(13269049)	C	AluY	SINE/Alu	(7)	304	1	555791
16	4.1	0.0	3.7	chr10	120528774	120528800	(13268622)	+	(TTGTT)n	Simple_repeat	1	27	(0)	555792
408	21.4	5.5	0.0	chr10	120528801	120528903	(13268519)	C	MER106A	DNA/hAT-Charlie	(15)	221	113	555793
774	12.8	0.8	9.5	chr10	124435096	124435242	(9362180)	C	AluJb	SINE/Alu	(178)	134	1	561903
308	23.9	4.8	2.1	chr10	124435437	124435553	(9361869)	+	L2a	LINE/L2	3235	3409	(17)	561915
288	26.4	4.1	4.5	chr10	124735787	124735935	(9061487)	C	MIRb	SINE/MIR	(103)	159	15	562370
299	9.4	2.2	0.4	chr10	127739770	127740226	(6057196)	+	(CACCCA)n	Simple_repeat	1	467	(0)	566563
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
276	30.7	14.7	0.6	chr11	670097	670260	(134416362)	+	L1ME2z	LINE/L1	5970	6160	(284)	573734
269	26.0	1.3	1.3	chr11	4662892	4662969	(130423653)	C	MIRc	SINE/MIR	(32)	236	159	579043
2293	12.2	0.6	1.0	chr11	4663072	4663414	(130423208)	+	AluSp	SINE/Alu	1	313	(0)	579044
2549	12.0	8.7	0.9	chr11	5658713	5659157	(129427465)	+	L1PA8	LINE/L1	5686	6168	(4)	580303
1141	14.4	1.5	0.5	chr11	5659158	5659352	(129427270)	+	LTR1	LTR/ERV1	587	783	(0)	580301
373	35.1	5.5	2.8	chr11	6413973	6414380	(128672242)	+	L2c	LINE/L2	2789	3207	(180)	581288
327	26.4	12.7	3.4	chr11	8677251	8677399	(126409223)	+	L2a	LINE/L2	3262	3426	(0)	584330
223	35.6	6.4	4.3	chr11	8677407	8677497	(126409125)	C	MIRb	SINE/MIR	(108)	160	67	584331
784	18.3	1.5	0.0	chr11	8677498	8677628	(126408994)	+	FLAM_C	SINE/Alu	1	133	(10)	584332
223	35.6	6.4	4.3	chr11	8677629	8677674	(126408948)	C	MIRb	SINE/MIR	(202)	66	20	584331
18932	8.9	1.6	0.5	chr11	10061057	10063324	(125023298)	+	L1PA14	LINE/L1	5843	8144	(12)	586986
2119	13.7	11.4	2.1	chr11	10075427	10075813	(125010809)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	587011
593	33.7	6.4	7.4	chr11	10075905	10077126	(125009496)	+	L1PA15-16	LINE/L1	14	1576	(5290)	587012
720	23.0	9.0	2.7	chr11	12396036	12396254	(122690368)	C	MIRb	SINE/MIR	(34)	234	1	590716
9780	16.1	5.7	6.0	chr11	12642522	12644049	(122442573)	+	L1MCa	LINE/L1	1	1477	(5031)	591097
774	28.7	1.3	9.5	chr11	12971449	12971819	(122114803)	+	L2a	LINE/L2	2793	3143	(283)	591586
805	21.1	2.1	0.0	chr11	13670088	13670229	(121416393)	C	AluJr	SINE/Alu	(30)	282	138	592647
15	14.8	2.6	2.5	chr11	13670260	13670298	(121416324)	+	(TTATT)n	Simple_repeat	1	40	(0)	592648
549	15.2	2.9	0.0	chr11	14545919	14546017	(120540605)	C	Charlie4a	DNA/hAT-Charlie	(390)	118	17	594143
216	26.9	1.9	0.0	chr11	14546059	14546110	(120540512)	C	MIR3	SINE/MIR	(125)	83	31	594152
18	4.8	0.0	0.0	chr11	14546130	14546151	(120540471)	+	(CT)n	Simple_repeat	1	22	(0)	594153
2216	11.5	0.0	0.0	chr11	14546457	14546735	(120539887)	C	AluSg	SINE/Alu	(31)	279	1	594154
1739	18.4	4.7	5.6	chr11	15030025	15030434	(120056188)	+	MLT1A1	LTR/ERVL-MaLR	3	408	(0)	594832
1449	34.0	2.8	4.4	chr11	15030435	15030565	(120056057)	+	ERV3-16A3_I-int	LTR/ERVL	5098	5225	(1)	594831
628	31.0	9.5	4.6	chr11	15030566	15030938	(120055684)	+	LTR16C	LTR/ERVL	1	426	(69)	594831
13	6.3	8.1	5.0	chr11	17476570	17476606	(117610016)	+	(CCT)n	Simple_repeat	1	40	(0)	598820
22	27.5	3.2	4.7	chr11	17476825	17476948	(117609674)	+	(CCCCG)n	Simple_repeat	1	128	(0)	598821
2392	10.3	0.0	0.0	chr11	20316570	20316871	(114769751)	+	AluSz6	SINE/Alu	1	302	(10)	603714
2550	26.7	8.2	4.3	chr11	20957168	20958135	(114128487)	+	L1MEd	LINE/L1	324	1329	(5757)	604738
528	35.5	2.6	3.5	chr11	21364975	21365287	(113721335)	+	L2c	LINE/L2	3058	3367	(20)	605397
228	23.5	8.6	4.5	chr11	21404150	21404238	(113682384)	C	MamGypLTR1b	LTR/Gypsy	(689)	93	1	605459
238	23.4	6.1	2.5	chr11	21461234	21461312	(113625310)	+	MIRb	SINE/MIR	19	100	(168)	605530
310	29.5	8.6	2.0	chr11	21885904	21886055	(113200567)	C	L2	LINE/L2	(546)	2873	2711	606144
285	31.5	4.2	0.6	chr11	21886094	21886275	(113200347)	C	L2	LINE/L2	(411)	3008	2820	606145
77	4.4	2.1	0.0	chr11	22124618	22124710	(112961912)	+	(GATA)n	Simple_repeat	1	95	(0)	606473
1483	29.3	0.4	3.3	chr11	22124711	22125380	(112961242)	+	L1M4c	LINE/L1	1595	2268	(5249)	606474
1844	17.8	0.3	1.3	chr11	22139644	22139941	(112946681)	+	AluSz	SINE/Alu	1	295	(17)	606490
1287	21.9	12.3	7.0	chr11	22139942	22140189	(112946433)	+	MLT1A0	LTR/ERVL-MaLR	87	365	(0)	606489
355	26.9	1.8	6.9	chr11	22140190	22140272	(112946350)	C	L2b	LINE/L2	(71)	3316	3224	606488
4842	24.2	8.7	0.6	chr11	25998075	25999765	(109086857)	C	L1MB8	LINE/L1	(1927)	4219	2379	611820
1164	14.6	1.4	2.4	chr11	25999786	25999996	(109086626)	C	THE1A	LTR/ERVL-MaLR	(0)	355	147	611821
855	14.5	1.4	1.4	chr11	26000002	26000141	(109086481)	C	THE1C	LTR/ERVL-MaLR	(235)	140	1	611822
14	15.3	0.0	0.0	chr11	28311802	28311830	(106774792)	+	(TGAG)n	Simple_repeat	1	29	(0)	615339
758	27.5	15.3	3.6	chr11	29005525	29005909	(106080713)	+	LTR16	LTR/ERVL	1	438	(0)	616374
454	29.4	2.1	5.3	chr11	30191558	30191587	(104895035)	+	MIR	SINE/MIR	12	36	(226)	618085
2187	12.1	4.7	2.2	chr11	30191588	30191942	(104894680)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	618086
454	29.4	2.1	5.3	chr11	30191943	30192062	(104894560)	+	MIR	SINE/MIR	37	157	(105)	618085
43	2.3	2.2	0.0	chr11	30584342	30584386	(104502236)	+	(AC)n	Simple_repeat	1	46	(0)	618700
11	17.5	0.0	5.6	chr11	30584705	30584740	(104501882)	+	(CCCGAG)n	Simple_repeat	1	36	(0)	618701
758	32.0	1.1	1.4	chr11	30715570	30715851	(104370771)	C	MER121	DNA/hAT?	(19)	382	102	618905
2242	10.7	1.9	1.9	chr11	30728422	30728545	(104358077)	+	AluSg4	SINE/Alu	1	124	(186)	618934
32	0.0	0.0	0.0	chr11	30728546	30728575	(104358047)	+	(ACAAA)n	Simple_repeat	1	30	(0)	618935
2242	10.7	1.9	1.9	chr11	30728576	30728760	(104357862)	+	AluSg4	SINE/Alu	132	310	(0)	618934
670	26.4	4.5	2.0	chr11	30728845	30729041	(104357581)	+	MIRc	SINE/MIR	47	248	(20)	618936
433	26.6	2.3	5.9	chr11	31299805	31299853	(103786769)	C	MIRc	SINE/MIR	(58)	210	167	619783
490	33.3	10.0	4.2	chr11	35586979	35587382	(99499240)	+	MLT1O	LTR/ERVL-MaLR	48	477	(65)	626989
1970	15.2	4.1	2.0	chr11	37094643	37094998	(97991624)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	629427
35	0.0	0.0	0.0	chr11	37112976	37113005	(97973617)	+	(AC)n	Simple_repeat	1	30	(0)	629453
2650	6.1	0.0	0.3	chr11	40336695	40337006	(94749616)	+	AluY	SINE/Alu	1	311	(0)	633769
870	31.7	14.1	3.3	chr11	40337007	40337459	(94749163)	C	L2a	LINE/L2	(212)	3214	2692	633767
12696	15.2	4.3	0.8	chr11	41728650	41729424	(93357198)	C	L1PA6	LINE/L1	(5355)	800	11	635856
1083	15.9	2.6	1.1	chr11	41729435	41729625	(93356997)	+	THE1A	LTR/ERVL-MaLR	158	351	(4)	635855
5094	17.6	2.5	3.7	chr11	41729768	41729945	(93356677)	C	L1MA5	LINE/L1	(2)	6298	6121	635859
238	33.3	5.5	0.0	chr11	42834383	42834484	(92252138)	+	MLT1L	LTR/ERVL-MaLR	409	516	(94)	637524
2358	13.3	3.3	0.3	chr11	42834529	42834881	(92251741)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	637525
181	19.4	7.5	7.5	chr11	43880537	43880603	(91206019)	C	L3	LINE/CR1	(110)	3989	3923	639137
464	29.3	4.6	0.5	chr11	43881084	43881272	(91205350)	C	MIRb	SINE/MIR	(50)	218	22	639138
540	21.7	7.9	9.2	chr11	44196242	44196576	(90890046)	C	HAL1	LINE/L1	(971)	1494	1108	639710
606	27.2	4.6	5.6	chr11	44196634	44196988	(90889634)	C	HAL1	LINE/L1	(1412)	1095	745	639710
286	3.1	0.0	0.0	chr11	47884796	47884827	(87201795)	C	U2	snRNA	(152)	36	5	646992
1774	18.9	3.8	5.5	chr11	47884833	47885058	(87201564)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	456	646993
2091	17.6	8.7	2.9	chr11	48968949	48972679	(86113943)	C	SATR1	Satellite	(39)	3945	1	648329
568	16.5	0.0	0.0	chr11	56858263	56858353	(78228269)	C	Arthur1B	DNA/hAT-Tip100	(1090)	135	45	652681
283	34.1	2.8	6.5	chr11	58690066	58690278	(76396344)	C	MIRb	SINE/MIR	(52)	216	9	655849
279	31.1	4.8	0.6	chr11	58690561	58690718	(76395904)	+	MIR3	SINE/MIR	27	187	(21)	655850
254	23.8	1.6	1.6	chr11	58690771	58690834	(76395788)	+	MIRc	SINE/MIR	123	186	(82)	655851
2123	8.1	0.3	2.0	chr11	63030920	63030942	(72055680)	+	L1MA1	LINE/L1	6006	6023	(279)	663346
1927	14.8	5.5	3.6	chr11	63030943	63031299	(72055323)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	663347
2123	8.1	0.3	2.0	chr11	63031300	63031577	(72055045)	+	L1MA1	LINE/L1	6024	6302	(0)	663346
8972	13.6	4.6	0.7	chr11	63394203	63396672	(71689950)	C	L1PBa1	LINE/L1	(3997)	2866	297	663663
9781	16.1	3.8	0.4	chr11	63396673	63398911	(71687711)	C	L1M1	LINE/L1	(5233)	2332	17	663660
196	19.2	5.5	8.8	chr11	63589606	63589662	(71496960)	+	MIRb	SINE/MIR	29	83	(185)	663943
233	26.8	12.5	1.4	chr11	63589723	63589808	(71496814)	+	MIRc	SINE/MIR	86	186	(82)	663943
188	29.7	8.6	1.5	chr11	63882688	63882752	(71203870)	C	MIR	SINE/MIR	(188)	74	5	664598
12	29.5	1.6	3.2	chr11	64165782	64165842	(70920780)	+	(CCG)n	Simple_repeat	1	62	(0)	665097
1363	26.9	13.6	7.5	chr11	64817505	64818305	(70268317)	C	L2a	LINE/L2	(2506)	913	56	666253
242	35.2	17.7	0.0	chr11	66051511	66051743	(69034879)	C	L2c	LINE/L2	(5)	3382	3100	668734
308	27.6	5.7	1.7	chr11	68395533	68395650	(66690972)	+	MER103C	DNA/hAT-Charlie	124	246	(51)	673335
208	30.4	1.4	1.4	chr11	68396021	68396090	(66690532)	C	L2b	LINE/L2	(6)	3369	3300	673336
446	28.9	7.8	9.3	chr11	68741635	68741896	(66344726)	C	L2b	LINE/L2	(25)	3401	3099	673866
677	21.9	0.0	0.0	chr11	70282344	70282462	(64804160)	C	FLAM_A	SINE/Alu	(23)	119	1	676619
516	28.4	4.2	0.5	chr11	73348837	73349041	(61737581)	C	L2b	LINE/L2	(188)	3187	2975	681675
340	26.9	8.1	1.5	chr11	73349186	73349331	(61737291)	+	MIRb	SINE/MIR	35	189	(41)	681677
207	26.2	3.2	0.0	chr11	73509843	73509903	(61576719)	+	L2c	LINE/L2	3094	3156	(219)	681990
23	29.0	3.5	2.5	chr11	75438832	75438946	(59647676)	+	GA-rich	Low_complexity	1	119	(0)	686050
1595	29.0	6.8	1.4	chr11	75966452	75967190	(59119432)	C	L1MEf	LINE/L1	(5322)	920	124	687127
275	18.8	0.0	0.0	chr11	75967565	75967612	(59119010)	C	Charlie1b	DNA/hAT-Charlie	(3)	520	473	687130
603	32.0	1.7	7.8	chr11	76805650	76805957	(58280665)	+	L2b	LINE/L2	3087	3375	(0)	688717
418	26.6	13.9	7.0	chr11	78394625	78394911	(56691711)	+	LTR78B	LTR/ERV1	471	780	(516)	691946
12	14.8	0.0	5.9	chr11	78560973	78561006	(56525616)	+	G-rich	Low_complexity	1	34	(0)	692260
2254	14.0	1.6	2.7	chr11	78837099	78837466	(56249156)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	692744
245	30.0	1.2	1.2	chr11	79031529	79031609	(56055013)	+	L2b	LINE/L2	3295	3375	(0)	693119
922	21.6	6.4	0.5	chr11	79031797	79032001	(56054621)	+	MER20	DNA/hAT-Charlie	1	218	(1)	693120
396	11.1	0.5	7.5	chr11	79163764	79164601	(55922021)	+	(TA)n	Simple_repeat	1	777	(0)	693383
2682	9.2	1.4	0.0	chr11	79164602	79164947	(55921675)	+	THE1A	LTR/ERVL-MaLR	4	354	(1)	693384
396	11.1	0.5	7.5	chr11	79164948	79164957	(55921665)	+	(TA)n	Simple_repeat	2	11	(0)	693385
46	0.0	0.0	0.0	chr11	79164958	79164996	(55921626)	+	(TG)n	Simple_repeat	1	39	(0)	693386
11182	12.3	1.1	1.0	chr11	79770254	79771487	(55315135)	+	MSTA-int	LTR/ERVL-MaLR	396	1630	(1)	694576
748	27.1	9.8	7.5	chr11	84855904	84856222	(50230400)	C	L3	LINE/CR1	(1)	4098	3772	703020
2370	26.9	9.9	9.8	chr11	85055606	85057062	(50029560)	+	L1ME3	LINE/L1	298	1756	(4486)	703332
912	31.1	4.4	3.8	chr11	85830466	85830947	(49255675)	+	LTR16E1	LTR/ERVL	1	537	(1)	704461
2175	12.9	4.2	1.1	chr11	87299160	87299528	(47787094)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	706945
59	0.0	0.0	0.0	chr11	88441549	88441598	(46645024)	+	(TA)n	Simple_repeat	1	50	(0)	708583
2093	14.2	5.2	2.0	chr11	91052187	91052538	(44034084)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	712268
2141	21.6	7.6	1.1	chr11	91052566	91053109	(44033513)	+	Tigger9b	DNA/TcMar-Tigger	40	621	(3)	712269
2633	15.6	2.3	0.0	chr11	92277377	92277851	(42808771)	+	L1PA16	LINE/L1	5660	6145	(21)	713924
18	15.4	2.2	2.2	chr11	92571043	92571087	(42515535)	+	A-rich	Low_complexity	1	46	(0)	714358
561	23.8	8.6	0.5	chr11	94031371	94031573	(41055049)	C	L1ME4b	LINE/L1	(224)	668	448	716593
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18	0.0	0.0	0.0	chr11	95564431	95564450	(39522172)	+	(T)n	Simple_repeat	1	20	(0)	718824
265	32.6	9.8	2.2	chr11	97179768	97179946	(37906676)	C	LTR78	LTR/ERV1	(623)	681	488	720960
2126	13.2	4.1	3.1	chr11	97180014	97180373	(37906249)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	720961
13535	14.5	2.2	4.9	chr11	100797067	100798773	(34287849)	+	Tigger1	DNA/TcMar-Tigger	759	2418	(0)	725527
1764	16.5	0.0	6.5	chr11	102798724	102799032	(32287590)	+	AluJb	SINE/Alu	2	290	(22)	728490
2017	25.7	6.0	2.3	chr11	105194992	105195664	(29890958)	+	L1MC4	LINE/L1	6895	7638	(404)	731876
1971	16.2	3.6	2.8	chr11	105195665	105196025	(29890597)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	731877
2017	25.7	4.8	1.4	chr11	105196026	105196236	(29890386)	+	L1MC4	LINE/L1	7639	7856	(186)	731876
695	29.4	7.7	1.1	chr11	105854467	105854745	(29231877)	C	L2a	LINE/L2	(560)	2859	2561	732790
416	29.6	11.0	0.9	chr11	105854813	105855005	(29231617)	+	MIRc	SINE/MIR	9	208	(54)	732791
192	32.7	12.0	1.8	chr11	106474934	106475045	(28611577)	+	MIRb	SINE/MIR	76	200	(68)	733613
11136	9.1	3.2	0.5	chr11	106648622	106650157	(28436465)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	733853
1943	16.5	3.6	2.2	chr11	106650158	106650516	(28436106)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	733853
1149	16.9	1.2	4.2	chr11	106650517	106650724	(28435898)	C	L1MA6	LINE/L1	(46)	6254	6051	733852
3401	28.0	2.5	2.6	chr11	107102150	107104353	(27982269)	+	L1PB3	LINE/L1	60	1692	(5224)	734442
230	27.6	12.2	3.1	chr11	108148193	108148319	(26938303)	+	L1M6	LINE/L1	716	855	(5641)	736340
10046	13.6	4.1	0.4	chr11	109280020	109282348	(25804274)	C	L1PBa1	LINE/L1	(4040)	2823	356	738105
524	26.6	12.1	4.8	chr11	109305975	109306203	(25780419)	+	MIRb	SINE/MIR	13	260	(8)	738137
2140	22.6	10.0	1.8	chr11	109512380	109512930	(25573692)	+	MLT2F	LTR/ERVL	1	601	(62)	738440
1443	22.6	14.4	1.4	chr11	111471836	111472347	(23614275)	+	L2a	LINE/L2	2493	3082	(337)	741433
527	30.1	9.5	1.4	chr11	115812159	115812370	(19274252)	+	LTR105_Mam	LTR/ERVL	41	271	(329)	748286
888	18.6	7.7	0.0	chr11	116234047	116234202	(18852420)	C	FAM	SINE/Alu	(16)	169	1	748922
67	1.6	0.0	0.0	chr11	118648270	118648331	(16438291)	+	(TG)n	Simple_repeat	1	62	(0)	753286
3355	12.9	4.9	3.6	chr11	121406151	121406737	(13679885)	C	LTR49	LTR/ERV1	(0)	595	1	758059
3636	11.8	2.6	1.2	chr11	121406738	121407312	(13679310)	C	LTR49-int	LTR/ERV1	(0)	6331	5749	758059
2220	13.1	3.6	0.0	chr11	122495828	122496178	(12590444)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	759665
616	23.3	3.3	0.0	chr11	123301598	123301743	(11784879)	C	MER5A	DNA/hAT-Charlie	(0)	189	39	761281
1100	24.2	11.8	1.4	chr11	124563766	124564608	(10522014)	+	L1M8	LINE/L1	397	1414	(941)	763219
1199	24.7	4.4	8.3	chr11	124564629	124564795	(10521827)	+	L1MC5	LINE/L1	7945	8113	(1191)	763220
3920	5.9	4.3	0.0	chr11	124564796	124565286	(10521336)	C	MER9a1	LTR/ERVK	(0)	513	1	763221
389	30.3	14.6	0.0	chr11	125421730	125421904	(9664718)	C	Charlie17a	DNA/hAT-Charlie	(12)	205	1	764484
1530	19.3	3.3	3.0	chr11	126065239	126065542	(9021080)	+	MLT1A0	LTR/ERVL-MaLR	61	365	(0)	765440
3567	11.4	2.4	3.4	chr11	128318057	128318638	(6767984)	C	L1PB1	LINE/L1	(2)	6149	5574	768744
229	29.0	11.6	9.4	chr11	128318990	128319191	(6767431)	+	AmnSINE1	SINE/5S-Deu-L2	85	291	(284)	768745
367	23.6	10.8	5.2	chr11	128653609	128653782	(6432840)	+	L1M6	LINE/L1	14	198	(6298)	769192
905	29.7	12.9	4.3	chr11	128654163	128654412	(6432210)	+	L1M6	LINE/L1	807	1100	(5396)	769192
2310	27.3	10.1	4.5	chr11	130701100	130702325	(4384297)	C	HAL1	LINE/L1	(788)	1719	417	772299
16	5.2	0.0	0.0	chr11	134878471	134878490	(208132)	+	(CT)n	Simple_repeat	1	20	(0)	777765
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
583	19.7	4.9	0.0	chr12	709526	709642	(132565667)	C	L1MB7	LINE/L1	(43)	6141	6019	779296
1327	22.3	4.6	5.4	chr12	709643	710058	(132565251)	C	MER21C	LTR/ERVL	(431)	507	18	779297
36697	7.0	1.5	1.3	chr12	1711650	1715498	(131559811)	C	HERV9NC-int	LTR/ERV1	(958)	5160	1301	781148
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
28	0.0	2.9	2.8	chr12	6328936	6328970	(126946339)	+	(AAAAC)n	Simple_repeat	1	36	(0)	788488
12150	15.9	2.5	0.9	chr12	7363325	7366533	(125908776)	+	L1MA4	LINE/L1	3032	6300	(0)	790305
3906	20.1	2.0	1.9	chr12	9947924	9948960	(123326349)	+	L1MB2	LINE/L1	5125	6164	(7)	794528
1663	20.6	6.8	5.4	chr12	10029605	10029972	(123245337)	C	L1MC2	LINE/L1	(311)	6033	5674	794628
4072	6.5	0.4	0.0	chr12	10029973	10030483	(123244826)	+	MER9a1	LTR/ERVK	1	513	(0)	794629
1038	15.9	2.6	13.7	chr12	12777502	12777764	(120497545)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	4	798758
2353	8.6	0.0	1.3	chr12	14664936	14665237	(118610072)	+	AluSg4	SINE/Alu	5	302	(8)	801717
280	34.7	11.7	1.9	chr12	14665247	14665662	(118609647)	C	L2b	LINE/L2	(240)	3135	2680	801718
2035	15.8	4.4	2.0	chr12	15093206	15093560	(118181749)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	802331
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
14	21.5	3.4	4.9	chr12	17215792	17215872	(116059437)	+	(TCCT)n	Simple_repeat	1	79	(0)	805234
13335	15.7	4.1	1.6	chr12	21262184	21264100	(112011209)	C	L1M4c	LINE/L1	(4372)	2012	19	810559
911	17.9	0.0	0.0	chr12	27377616	27377760	(105897549)	+	AluJo	SINE/Alu	158	302	(10)	819459
279	29.1	5.4	2.1	chr12	27377952	27378095	(105897214)	+	MamRep488	DNA/hAT-Tip100	66	214	(5)	819460
426	22.7	7.2	1.9	chr12	27378159	27378315	(105896994)	+	MER104	DNA/TcMar-Tc2	16	181	(0)	819461
326	33.6	11.8	5.5	chr12	27378328	27378930	(105896379)	C	L2c	LINE/L2	(179)	3208	2575	819462
13	10.1	5.9	2.8	chr12	28591202	28591235	(104684074)	+	A-rich	Low_complexity	1	36	(0)	821266
517	17.6	10.5	1.1	chr12	28591449	28591638	(104683671)	C	MER33	DNA/hAT-Charlie	(10)	314	105	821267
464	32.5	4.8	5.5	chr12	29544828	29545081	(103730228)	+	MIRb	SINE/MIR	14	265	(3)	822503
1506	32.8	9.1	3.0	chr12	30529434	30530366	(102744943)	C	L3	LINE/CR1	(378)	3721	2726	823832
294	28.3	4.9	1.1	chr12	34335201	34335375	(98939934)	+	GSATII	Satellite/centr	30	211	(5)	830066
251	31.5	5.1	1.8	chr12	34335400	34335570	(98939739)	+	GSATII	Satellite/centr	40	216	(0)	830066
8898	17.0	7.6	2.5	chr12	39742718	39745084	(93530225)	+	L1MCa	LINE/L1	5	2557	(3764)	832832
2482	9.1	4.0	0.0	chr12	44281909	44282249	(88993060)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	839247
11435	9.1	2.1	0.0	chr12	44282250	44283795	(88991514)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	839247
2204	12.2	3.1	2.1	chr12	45510488	45510864	(87764445)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	840901
11376	11.0	1.1	1.4	chr12	45510865	45512500	(87762809)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	840901
363	27.7	8.1	2.1	chr12	45622541	45622680	(87652629)	C	L2a	LINE/L2	(12)	3414	3266	841095
8580	23.6	6.8	4.1	chr12	47090533	47094889	(86180420)	C	L1ME3A	LINE/L1	(356)	6088	1656	843103
1327	15.3	0.9	3.9	chr12	47094897	47095125	(86180184)	C	AluJr	SINE/Alu	(5)	307	86	843104
1869	20.7	8.3	4.1	chr12	47095127	47095894	(86179415)	C	L1ME3A	LINE/L1	(4572)	1670	819	843103
15	18.1	2.6	0.0	chr12	47879132	47879169	(85396140)	+	(CAGAGC)n	Simple_repeat	1	39	(0)	844360
14	20.3	4.4	0.0	chr12	47879185	47879229	(85396080)	+	(CCCCCCA)n	Simple_repeat	1	47	(0)	844361
188	23.3	4.8	1.6	chr12	47879314	47879374	(85395935)	+	MIR	SINE/MIR	10	72	(190)	844362
29	6.4	6.1	0.0	chr12	47890349	47890397	(85384912)	+	(TA)n	Simple_repeat	1	52	(0)	844382
259	31.7	12.7	3.1	chr12	48758653	48758844	(84516465)	+	L2c	LINE/L2	2932	3144	(243)	845732
1893	13.7	0.7	0.0	chr12	49743245	49743521	(83531788)	C	AluSz6	SINE/Alu	(20)	292	14	847717
299	30.0	4.0	14.4	chr12	49937539	49937815	(83337494)	C	L2b	LINE/L2	(93)	3282	3036	848101
14	24.0	0.0	0.0	chr12	49937821	49937859	(83337450)	+	(CACATA)n	Simple_repeat	1	39	(0)	848102
1120	22.0	4.9	0.7	chr12	49938372	49938650	(83336659)	C	L1ME3A	LINE/L1	(2)	6171	5880	848103
356	22.3	6.0	0.0	chr12	50242687	50242780	(83032529)	C	Charlie15a	DNA/hAT-Charlie	(0)	224	125	848742
28	2.7	5.3	0.0	chr12	50242807	50242844	(83032465)	+	(CTGGGAT)n	Simple_repeat	1	40	(0)	848743
1527	26.7	14.6	2.3	chr12	51490585	51491580	(81783729)	C	L2a	LINE/L2	(316)	3110	1971	851439
656	20.7	7.5	9.3	chr12	53451383	53451712	(79823597)	C	L1MC5a	LINE/L1	(783)	1994	1696	854794
4123	9.4	0.7	1.0	chr12	54924806	54925405	(78349904)	C	MER4A1_	LTR/ERV1	(0)	600	3	857127
2116	16.4	1.4	2.5	chr12	54925450	54925817	(78349492)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	857128
2183	17.4	9.9	1.1	chr12	58371747	58372205	(74903104)	C	MER67D	LTR/ERV1	(0)	514	11	862672
226	16.2	10.5	4.2	chr12	58372243	58372313	(74902996)	C	MamRep434	DNA/TcMar-Tigger	(288)	138	63	862673
9184	25.0	6.0	1.8	chr12	58678164	58681005	(74594304)	C	L1MA4A	LINE/L1	(4072)	3494	377	863121
265	30.7	1.1	3.8	chr12	69224114	69224298	(64051011)	+	MLT1L	LTR/ERVL-MaLR	391	610	(0)	878937
2372	7.7	0.0	1.4	chr12	69224361	69224646	(64050663)	+	AluY	SINE/Alu	1	282	(29)	878938
27	0.0	0.0	0.0	chr12	70293915	70293940	(62981369)	+	(T)n	Simple_repeat	1	26	(0)	880692
264	31.1	20.0	0.8	chr12	70293941	70294064	(62981245)	+	Tigger19b	DNA/TcMar-Tigger	228	383	(167)	880693
1482	15.2	3.3	1.5	chr12	72237552	72237819	(61037490)	+	THE1D	LTR/ERVL-MaLR	109	381	(0)	883566
1153	26.9	8.9	1.5	chr12	72237871	72238273	(61037036)	C	L2a	LINE/L2	(338)	3081	2646	883563
793	34.3	6.4	7.2	chr12	72681828	72682482	(60592827)	C	L2a	LINE/L2	(55)	3371	2731	884098
1604	22.0	4.8	1.6	chr12	72682483	72682926	(60592383)	+	MLT1C	LTR/ERVL-MaLR	5	463	(4)	884099
820	31.0	0.7	0.0	chr12	74199255	74199522	(59075787)	C	L1ME4a	LINE/L1	(1314)	4832	4563	885919
2017	12.6	2.2	8.7	chr12	74199524	74199913	(59075396)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	885926
13802	15.9	5.5	1.8	chr12	74237387	74239999	(59035310)	+	Tigger2	DNA/TcMar-Tigger	3	2718	(0)	885967
11454	10.0	2.6	0.3	chr12	76737724	76739995	(56535314)	C	L1PB1	LINE/L1	(4291)	2572	251	889770
303	28.8	8.5	0.8	chr12	77891686	77891804	(55383505)	C	MIRc	SINE/MIR	(137)	131	3	891435
322	32.5	2.4	0.6	chr12	78836368	78836528	(54438781)	+	LTR33A	LTR/ERVL	347	510	(10)	892703
2239	12.8	4.8	0.6	chr12	80004604	80004964	(53270345)	C	THE1D	LTR/ERVL-MaLR	(4)	377	1	894418
496	33.1	9.3	3.2	chr12	81393397	81393767	(51881542)	+	MamGypLTR3a	LTR/Gypsy	95	490	(491)	896332
2007	23.9	5.1	5.9	chr12	82192080	82192638	(51082671)	+	MLT2B3	LTR/ERVL	1	554	(0)	897436
790	22.1	4.1	5.9	chr12	85719123	85719363	(47555946)	C	MLT1A0	LTR/ERVL-MaLR	(118)	256	8	902023
1058	27.7	2.0	1.0	chr12	85719371	85719665	(47555644)	C	L1M4	LINE/L1	(7158)	359	62	902020
1110	28.4	7.8	3.5	chr12	89258545	89259268	(44016041)	+	MLT1J-int	LTR/ERVL-MaLR	572	1371	(16)	906708
1123	28.6	9.5	2.8	chr12	89259288	89259747	(44015562)	+	MLT1J	LTR/ERVL-MaLR	3	496	(16)	906708
270	29.2	10.0	5.0	chr12	89430657	89430836	(43844473)	+	L2c	LINE/L2	3194	3383	(4)	907019
1099	20.5	2.0	1.5	chr12	90045570	90045772	(43229537)	+	MER20	DNA/hAT-Charlie	1	204	(15)	907970
350	32.4	10.1	2.7	chr12	90175920	90176287	(43099022)	C	L1MC	LINE/L1	(786)	5360	4963	908157
744	20.5	0.0	0.0	chr12	90176289	90176405	(43098904)	+	AluJo	SINE/Alu	2	118	(194)	908158
15	13.7	2.2	6.4	chr12	90176534	90176579	(43098730)	+	(TTGTAT)n	Simple_repeat	1	47	(0)	908159
4856	19.2	2.2	2.1	chr12	90398023	90398937	(42876372)	C	MER70-int	LTR/ERVL	(6)	5017	4102	908494
1730	24.1	1.3	1.8	chr12	90398929	90399629	(42875680)	C	MER70-int	LTR/ERVL	(4280)	743	2	908494
4157	7.7	2.2	7.1	chr12	90444827	90445746	(42829563)	C	HERV9N-int	LTR/ERV1	(894)	5224	3813	908543
2168	14.4	8.9	1.0	chr12	90801306	90801699	(42473610)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	909058
210	26.3	0.0	5.8	chr12	92436029	92436122	(40839187)	+	L2a	LINE/L2	3304	3426	(0)	911537
208	36.2	16.7	2.5	chr12	92602763	92603161	(40672148)	C	L2c	LINE/L2	(11)	3376	2910	911822
930	28.8	9.6	3.5	chr12	92819758	92820156	(40455153)	+	L2a	LINE/L2	2936	3361	(65)	912147
556	30.2	15.5	3.7	chr12	93142008	93142546	(40132763)	C	L1M5	LINE/L1	(1028)	5118	4484	912811
323	32.9	8.3	0.0	chr12	95774305	95774447	(37500862)	+	MIR	SINE/MIR	99	254	(8)	917865
1947	12.9	0.0	7.8	chr12	96132613	96132944	(37142365)	+	AluSx1	SINE/Alu	1	306	(6)	918521
859	28.4	6.1	5.2	chr12	96132948	96133255	(37142054)	C	MER102b	DNA/hAT-Charlie	(22)	319	9	918522
216	34.3	10.5	7.3	chr12	98787250	98787469	(34487840)	+	L2b	LINE/L2	3103	3330	(45)	922929
1296	21.0	7.0	4.9	chr12	98899388	98899752	(34375557)	+	MLT2C1	LTR/ERVL	25	397	(0)	923089
209	27.6	1.7	0.0	chr12	98899754	98899811	(34375498)	+	MIR	SINE/MIR	199	257	(5)	923088
442	33.0	9.1	2.6	chr12	99298182	99298220	(33977089)	C	MIR	SINE/MIR	(1)	261	223	923695
2334	12.7	2.5	0.0	chr12	99298221	99298575	(33976734)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	923696
442	33.0	9.1	2.6	chr12	99298576	99298762	(33976547)	C	MIR	SINE/MIR	(40)	222	19	923695
256	37.1	5.2	4.0	chr12	99451420	99451646	(33823663)	C	L2b	LINE/L2	(206)	3169	2940	923912
1891	26.0	19.7	3.3	chr12	100945830	100946799	(32328510)	C	L2a	LINE/L2	(5)	3421	2220	926423
2584	9.2	1.1	4.5	chr12	102225503	102225879	(31049430)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	928735
1963	22.5	4.1	0.9	chr12	102990905	102991348	(30283961)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	7	929960
2154	19.1	2.2	2.4	chr12	103188493	103188914	(30086395)	+	MSTB	LTR/ERVL-MaLR	2	407	(19)	930264
2506	28.3	7.0	6.5	chr12	103450566	103451216	(29824093)	C	MLT1H-int	LTR/ERVL-MaLR	(326)	1083	429	930685
1593	18.9	4.2	0.0	chr12	103451217	103451513	(29823796)	C	AluJo	SINE/Alu	(2)	310	1	930686
2506	28.3	7.0	6.5	chr12	103451514	103451937	(29823372)	C	MLT1H-int	LTR/ERVL-MaLR	(981)	428	2	930685
369	31.9	0.0	0.0	chr12	104061439	104061551	(29213758)	C	Charlie18a	DNA/hAT-Charlie	(190)	152	40	931790
2280	11.7	0.3	0.3	chr12	104061695	104061994	(29213315)	+	AluSp	SINE/Alu	1	300	(13)	931791
703	26.0	4.4	4.4	chr12	104693539	104693767	(28581542)	C	L2c	LINE/L2	(74)	3313	3085	933104
505	21.4	2.3	1.1	chr12	104693903	104694079	(28581230)	C	MER58D	DNA/hAT-Charlie	(13)	373	24	933112
932	13.7	3.0	0.0	chr12	107554633	107554793	(25720516)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	938412
2414	8.8	0.0	0.3	chr12	111602776	111603080	(21672229)	+	AluSx1	SINE/Alu	1	304	(8)	947459
1714	13.3	0.0	7.2	chr12	111603081	111603229	(21672080)	+	AluJo	SINE/Alu	134	282	(30)	947458
17	0.0	0.0	0.0	chr12	111603253	111603271	(21672038)	+	(AC)n	Simple_repeat	1	19	(0)	947460
504	20.1	0.0	1.9	chr12	111603291	111603416	(21671893)	C	L1MB7	LINE/L1	(465)	5714	5593	947457
234	32.3	11.8	1.2	chr12	112125998	112126163	(21149146)	+	MIRb	SINE/MIR	35	220	(48)	948543
1041	12.6	0.0	1.2	chr12	112825943	112826103	(20449206)	C	L1PA10	LINE/L1	(11)	6157	5999	950194
823	28.3	12.7	4.6	chr12	112826104	112826440	(20448869)	C	L2a	LINE/L2	(244)	3182	2807	950193
2169	22.1	3.4	5.9	chr12	112826460	112827056	(20448253)	C	L1ME3	LINE/L1	(30)	6132	5551	950195
2504	10.7	2.9	1.6	chr12	113790112	113790481	(19484828)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	952510
1216	28.0	10.4	1.6	chr12	116141600	116142325	(17132984)	+	L2a	LINE/L2	2624	3413	(13)	957418
361	29.3	11.9	0.8	chr12	117677725	117677858	(15597451)	+	L2b	LINE/L2	3273	3423	(3)	960832
199	17.7	16.2	1.6	chr12	117677867	117677929	(15597380)	C	MIRb	SINE/MIR	(79)	189	116	960836
1912	12.6	0.3	5.2	chr12	117677941	117678249	(15597060)	C	AluSz	SINE/Alu	(18)	294	1	960837
572	26.2	0.0	0.7	chr12	117819470	117819615	(15455694)	+	L1MA10	LINE/L1	6190	6334	(0)	961137
1015	15.8	1.1	7.5	chr12	118458768	118458966	(14816343)	+	MER20	DNA/hAT-Charlie	1	186	(33)	962603
381	31.5	2.5	5.3	chr12	118854231	118854438	(14420871)	+	LTR85a	LTR/Gypsy?	35	236	(466)	963491
21	18.1	0.0	0.0	chr12	120884786	120884823	(12390486)	+	(T)n	Simple_repeat	1	38	(0)	968037
9646	10.1	7.2	4.4	chr12	121374283	121375813	(11899496)	+	LTR12C	LTR/ERV1	4	1579	(0)	969254
1820	15.1	2.2	0.4	chr12	121376042	121376312	(11898997)	C	AluSz	SINE/Alu	(35)	277	2	969255
346	32.7	13.7	1.6	chr12	121828910	121829422	(11445887)	C	L2b	LINE/L2	(200)	3175	2575	970408
2710	5.3	0.0	0.7	chr12	122525092	122525393	(10749916)	+	AluSq2	SINE/Alu	1	300	(13)	972053
1102	21.9	8.9	3.5	chr12	124013959	124014362	(9260947)	C	L2a	LINE/L2	(1)	3425	2955	975296
367	30.8	2.9	4.3	chr12	124766900	124767106	(8508203)	C	MamRep4096	DNA/hAT-Tip100	(220)	206	3	976784
192	27.2	6.6	0.9	chr12	124767272	124767377	(8507932)	C	L2b	LINE/L2	(0)	3387	3241	976785
183	25.9	3.6	0.0	chr12	124767412	124767465	(8507844)	+	MIR1_Amn	SINE/MIR	94	149	(81)	976786
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
2695	8.8	0.3	0.0	chr12	129109480	129109833	(4165476)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	984485
694	31.2	3.0	0.0	chr12	129109949	129110240	(4165069)	+	LTR16B1	LTR/ERVL	145	445	(35)	984486
474	22.6	9.4	0.0	chr12	129364300	129364414	(3910895)	+	MER91C	DNA/hAT-Tip100	13	139	(1)	984903
2075	13.2	0.3	0.0	chr12	130274709	130274995	(3000314)	C	AluSx1	SINE/Alu	(24)	288	1	986468
4699	16.4	3.1	3.6	chr12	130274996	130275666	(2999643)	C	L1MC1	LINE/L1	(986)	5160	4478	986467
15920	17.1	7.3	0.6	chr12	131177872	131179524	(2095785)	+	L1PB3	LINE/L1	1222	3016	(3900)	987821
341	28.9	7.7	3.9	chr13	21523513	21523801	(92840527)	+	MLT1K	LTR/ERVL-MaLR	47	283	(312)	996277
1337	16.6	0.9	1.5	chr13	24997666	24997925	(89366403)	+	HUERS-P3-int	LTR/ERV1	8702	8913	(6)	1001135
3303	18.5	3.5	1.3	chr13	24997933	24998556	(89365772)	+	LTR9B	LTR/ERV1	7	644	(0)	1001135
1945	14.3	3.5	3.0	chr13	26778219	26778586	(87585742)	C	L1MB3	LINE/L1	(0)	6183	5814	1003785
289	19.0	3.3	0.0	chr13	26778629	26778686	(87585642)	C	L1MB2	LINE/L1	(2)	6169	6110	1003786
208	27.7	10.8	3.1	chr13	30303120	30303290	(84061038)	C	L3b	LINE/CR1	(18)	5214	5035	1009425
1028	17.3	1.2	0.0	chr13	30303421	30303582	(84060746)	+	AluJo	SINE/Alu	137	300	(12)	1009426
1980	8.3	1.1	4.9	chr13	30703674	30703961	(83660367)	C	AluSq2	SINE/Alu	(36)	277	1	1010225
1019	16.7	3.0	0.5	chr13	30703997	30704189	(83660139)	+	MLT1F	LTR/ERVL-MaLR	351	548	(0)	1010224
540	18.6	0.0	0.7	chr13	33889838	33889944	(80474384)	+	L1MA6	LINE/L1	5773	5873	(291)	1014988
231	34.1	1.1	1.1	chr13	33889946	33890034	(80474294)	C	L2a	LINE/L2	(30)	3396	3308	1014989
540	32.2	13.9	7.1	chr13	34907063	34908087	(79456241)	+	L2c	LINE/L2	1805	2910	(509)	1016473
2292	11.9	0.3	0.0	chr13	37049458	37049769	(77314559)	+	AluSq2	SINE/Alu	1	313	(0)	1019466
689	17.7	8.2	0.0	chr13	37050239	37050362	(77313966)	+	FLAM_C	SINE/Alu	1	135	(8)	1019467
1542	19.7	13.9	0.7	chr13	42922227	42922655	(71441673)	+	MLT1D	LTR/ERVL-MaLR	2	496	(9)	1028100
682	33.3	3.5	6.9	chr13	44064185	44064574	(70299754)	C	L2b	LINE/L2	(0)	3375	3000	1029726
315	27.4	8.8	1.5	chr13	44064583	44064719	(70299609)	C	LTR88c	LTR/Gypsy?	(714)	148	1	1029727
3336	14.8	1.9	7.5	chr13	44095028	44095570	(70268758)	C	MER50B	LTR/ERV1	(190)	507	1	1029772
795	26.0	2.3	1.7	chr13	47144456	47144686	(67219642)	+	MIRb	SINE/MIR	11	237	(31)	1034918
256	32.1	10.2	4.8	chr13	47446205	47446431	(66917897)	C	MIRb	SINE/MIR	(38)	230	1	1035328
277	29.7	16.4	0.7	chr13	47446558	47446706	(66917622)	C	MER103C	DNA/hAT-Charlie	(4)	293	117	1035329
17	11.2	0.0	0.0	chr13	50071676	50071704	(64292624)	+	(CTG)n	Simple_repeat	1	29	(0)	1039592
1293	32.1	11.0	1.7	chr13	50775836	50776639	(63587689)	C	L1MEd	LINE/L1	(5985)	1101	214	1040634
302	31.7	12.5	4.0	chr13	51291173	51291629	(63072699)	+	L2b	LINE/L2	2677	3184	(191)	1041343
604	25.6	0.0	1.6	chr13	51505868	51505992	(62858336)	C	FLAM_A	SINE/Alu	(14)	128	6	1041698
822	24.1	12.9	7.9	chr13	51506046	51506537	(62857791)	C	L1M5	LINE/L1	(1896)	4250	3731	1041699
615	27.2	9.9	9.0	chr13	51664320	51664698	(62699630)	+	MLT1O	LTR/ERVL-MaLR	157	539	(3)	1041945
1687	15.1	1.4	5.0	chr13	52765230	52765350	(61598978)	C	AluJr4	SINE/Alu	(194)	118	1	1043622
17	16.7	2.4	2.3	chr13	52765351	52765363	(61598965)	+	(ATT)n	Simple_repeat	2	15	(0)	1043624
225	32.5	4.2	1.7	chr13	52765367	52765482	(61598846)	C	L2b	LINE/L2	(2)	3373	3255	1043625
2253	13.6	0.0	0.6	chr13	55863294	55863648	(58500680)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	1047694
10765	11.3	2.9	0.0	chr13	55863649	55865182	(58499146)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1047694
1613	15.7	5.0	0.3	chr13	56538722	56539067	(57825261)	C	L1MA8	LINE/L1	(6)	6285	5923	1048471
1579	19.8	2.5	1.6	chr13	56539068	56539386	(57824942)	+	MSTB	LTR/ERVL-MaLR	2	323	(103)	1048472
243	36.1	3.2	3.2	chr13	59134305	59134430	(55229898)	C	MIRb	SINE/MIR	(128)	140	15	1051632
9516	16.0	6.4	1.1	chr13	59536726	59539254	(54825074)	C	L1M1	LINE/L1	(4886)	2679	11	1052246
2486	15.2	1.4	2.3	chr13	61018765	61019202	(53345126)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	1	1054284
386	37.4	3.9	1.5	chr13	61019388	61019585	(53344743)	C	MIRb	SINE/MIR	(52)	216	14	1054285
581	25.1	21.7	6.3	chr13	61893320	61893591	(52470737)	+	MSTD	LTR/ERVL-MaLR	1	340	(56)	1055332
1888	12.1	0.0	0.0	chr13	61893592	61893839	(52470489)	C	AluSc5	SINE/Alu	(28)	281	34	1055333
1429	22.5	6.5	4.2	chr13	62044429	62044890	(52319438)	+	MER67C	LTR/ERV1	67	506	(8)	1055530
5050	12.2	3.8	3.8	chr13	62115189	62116025	(52248303)	+	LTR1A2	LTR/ERV1	1	837	(0)	1055598
3357	26.8	4.6	4.4	chr13	62357242	62358476	(52005852)	+	L1M1	LINE/L1	153	2054	(5511)	1055915
813	12.6	0.8	0.0	chr13	62756617	62756735	(51607593)	C	AluSx3	SINE/Alu	(17)	294	175	1056397
2084	24.5	4.1	0.6	chr13	62927143	62927823	(51436505)	+	L1MEc	LINE/L1	2504	3209	(3110)	1056620
6290	22.2	2.2	1.5	chr13	62927834	62930286	(51434042)	+	L1PA13	LINE/L1	501	3732	(3034)	1056623
2180	15.8	5.5	2.0	chr13	63367054	63367174	(50997154)	+	L1MA5	LINE/L1	5827	5949	(351)	1057165
5644	18.9	2.8	1.7	chr13	63367175	63368291	(50996037)	C	LTR28C	LTR/ERV1	(0)	1129	1	1057166
241	34.2	3.2	3.2	chr13	63606161	63606284	(50758044)	+	L1M3a	LINE/L1	324	447	(5508)	1057497
279	40.0	2.9	0.4	chr13	63606341	63606576	(50757752)	+	L1M3a	LINE/L1	541	782	(5173)	1057497
277	33.9	6.3	1.7	chr13	64034605	64034724	(50329604)	C	MIR	SINE/MIR	(89)	173	48	1058040
5607	15.0	4.0	0.5	chr13	64734801	64736493	(49627835)	C	L1PA17	LINE/L1	(13)	6153	4399	1058925
2768	17.7	14.2	7.5	chr13	64879796	64880504	(49483824)	C	LTR1	LTR/ERV1	(18)	765	1	1059088
305	36.3	5.0	3.4	chr13	65160994	65161170	(49203158)	C	HAL1b	LINE/L1	(2129)	292	113	1059419
2158	15.6	4.1	1.3	chr13	65161194	65161570	(49202758)	C	MER61D	LTR/ERV1	(0)	501	114	1059420
646	33.7	14.6	2.4	chr13	65623325	65623874	(48740454)	C	L2	LINE/L2	(2770)	649	21	1060040
674	32.4	8.7	3.7	chr13	65752584	65752910	(48611418)	C	L1MB2	LINE/L1	(5543)	1022	678	1060170
1442	16.7	2.6	5.4	chr13	65762926	65763078	(48601250)	C	LTR60B	LTR/ERV1	(127)	638	483	1060182
2016	13.5	4.7	5.5	chr13	65763079	65763248	(48601080)	C	THE1D	LTR/ERVL-MaLR	(0)	381	212	1060183
38	4.9	0.0	0.0	chr13	65763249	65763290	(48601038)	+	(GA)n	Simple_repeat	1	42	(0)	1060184
2016	13.5	4.7	5.5	chr13	65763291	65763348	(48600980)	C	THE1D	LTR/ERVL-MaLR	(170)	211	165	1060183
2198	13.4	0.3	0.0	chr13	65763349	65763653	(48600675)	+	AluSx	SINE/Alu	3	308	(4)	1060185
1502	30.4	6.8	3.7	chr13	65983620	65983837	(48380491)	C	HAL1	LINE/L1	(593)	1914	1692	1060474
1366	25.4	4.1	0.3	chr13	65983838	65984165	(48380163)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	1060478
1502	30.4	6.8	3.7	chr13	65984166	65984729	(48379599)	C	HAL1	LINE/L1	(816)	1691	1106	1060474
3098	15.6	2.6	0.2	chr13	66022355	66022882	(48341446)	+	Tigger1	DNA/TcMar-Tigger	185	725	(1693)	1060534
72	20.8	3.6	5.0	chr13	66152476	66152727	(48211601)	+	GA-rich	Low_complexity	1	261	(0)	1060683
1360	22.8	9.7	3.0	chr13	66174913	66175314	(48189014)	+	MLT1C	LTR/ERVL-MaLR	36	467	(0)	1060711
1627	20.1	10.1	1.6	chr13	66826923	66827348	(47536980)	+	MLT1D	LTR/ERVL-MaLR	40	505	(0)	1061516
1793	14.1	5.9	1.4	chr13	67311569	67311845	(47052483)	C	AluSx	SINE/Alu	(22)	290	1	1062112
2756	14.5	7.6	3.9	chr13	67623633	67623756	(46740572)	+	MER1A	DNA/hAT-Charlie	404	528	(1)	1062505
1997	14.9	6.3	4.9	chr13	67623757	67624030	(46740298)	+	MSTC	LTR/ERVL-MaLR	149	415	(13)	1062504
10927	11.7	0.4	0.1	chr13	67691681	67693256	(46671072)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1062587
2257	14.9	0.6	0.6	chr13	67707781	67708144	(46656184)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1062599
1522	21.8	4.4	3.0	chr13	67843896	67844297	(46520031)	C	L1MA10	LINE/L1	(0)	6334	5927	1062790
2321	11.7	0.3	0.0	chr13	68377902	68378209	(45986119)	+	AluSc8	SINE/Alu	1	309	(2)	1063468
474	28.1	6.9	7.2	chr13	69201792	69202098	(45162230)	+	LTR16E1	LTR/ERVL	213	518	(20)	1064506
278	36.3	8.4	7.4	chr13	70102865	70103337	(44260991)	C	L2c	LINE/L2	(0)	3387	2910	1065688
1882	16.9	2.2	8.2	chr13	70135900	70136337	(44227991)	C	MER57D	LTR/ERV1	(0)	411	1	1065727
4232	8.7	7.6	0.2	chr13	70154534	70155158	(44209170)	+	LTR76	LTR/ERV1	1	675	(0)	1065755
20559	10.2	1.7	0.9	chr13	70325986	70329827	(44034501)	C	L1PA10	LINE/L1	(5)	6163	2292	1065989
2311	14.6	0.6	0.0	chr13	70569566	70569927	(43794401)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1066310
10437	12.0	0.9	2.7	chr13	70569929	70571535	(43792793)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	1066310
715	7.8	1.0	2.8	chr13	70717106	70717211	(43647117)	+	THE1A	LTR/ERVL-MaLR	1	104	(260)	1066502
972	10.5	0.7	0.0	chr13	70717224	70717356	(43646972)	+	THE1A	LTR/ERVL-MaLR	222	355	(0)	1066502
11002	10.5	1.6	0.1	chr13	70717357	70718913	(43645415)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1066502
502	24.9	11.4	1.8	chr13	70788127	70788422	(43575906)	C	MLT1H2	LTR/ERVL-MaLR	(1)	578	208	1066614
2444	8.4	0.0	0.6	chr13	70853895	70854205	(43510123)	C	AluYj4	SINE/Alu	(2)	309	1	1066708
224	32.6	2.2	2.2	chr13	70854224	70854314	(43510014)	+	L2c	LINE/L2	3073	3163	(224)	1066709
657	32.8	5.5	3.8	chr13	71293996	71294334	(43069994)	+	MLT1J-int	LTR/ERVL-MaLR	731	1075	(312)	1067260
2028	20.2	9.7	0.4	chr13	72301575	72302031	(42062297)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	1068606
1384	26.4	10.7	14.6	chr13	72802218	72802786	(41561542)	C	L2a	LINE/L2	(610)	2809	2306	1069364
340	33.0	9.5	3.0	chr13	72802788	72803152	(41561176)	C	L2-3_Crp	LINE/L2	(1010)	1086	696	1069366
215	33.7	4.5	1.1	chr13	72803153	72803239	(41561089)	C	L2a	LINE/L2	(1527)	1892	1803	1069364
6233	16.8	5.8	2.7	chr13	73011127	73012069	(41352259)	+	L1MCa	LINE/L1	779	1736	(5457)	1069737
267	31.2	0.8	11.3	chr13	73883581	73883721	(40480607)	C	L2a	LINE/L2	(5)	3382	3229	1071215
6972	15.6	0.5	0.2	chr13	74750170	74751303	(39613025)	+	LTR57-int	LTR/ERVL	3882	5019	(324)	1072365
2175	12.3	1.3	1.0	chr13	74940414	74940723	(39423605)	+	AluSz	SINE/Alu	1	311	(1)	1072621
15	13.7	0.0	0.0	chr13	75250794	75250817	(39113511)	+	(AT)n	Simple_repeat	1	24	(0)	1073036
268	23.3	0.0	1.6	chr13	75250959	75251019	(39113309)	+	MIR3	SINE/MIR	149	208	(0)	1073037
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
270	25.4	11.9	3.3	chr13	75797519	75797640	(38566688)	+	MIR	SINE/MIR	123	256	(6)	1073896
1169	29.4	9.0	2.6	chr13	75931073	75931714	(38432614)	+	HAL1	LINE/L1	54	740	(1767)	1074074
14	17.7	9.6	0.0	chr13	76884132	76884183	(37480145)	+	(CCCTA)n	Simple_repeat	1	57	(0)	1075375
5024	23.9	7.2	2.8	chr13	77182778	77183541	(37180787)	C	L1M5	LINE/L1	(2011)	4135	3325	1075817
404	36.7	1.6	0.6	chr13	78189652	78189832	(36174496)	+	ERVL-E-int	LTR/ERVL	2708	2890	(2777)	1077190
1904	13.2	10.5	2.6	chr13	78895368	78895647	(35468681)	+	THE1D	LTR/ERVL-MaLR	1	317	(64)	1078175
2638	11.0	0.0	0.0	chr13	78895648	78896011	(35468317)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1078176
2464	12.2	0.6	0.0	chr13	78919492	78919853	(35444475)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1078200
819	31.6	5.1	0.9	chr13	79176498	79176835	(35187493)	C	ERVL-E-int	LTR/ERVL	(590)	5077	4725	1078552
1503	20.1	4.0	7.5	chr13	79594127	79594568	(34769760)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	42	1079167
21905	11.7	2.1	1.0	chr13	79607671	79612325	(34752003)	C	L1PB1	LINE/L1	(370)	6497	252	1079188
854	32.3	10.7	3.8	chr13	80010122	80011095	(34353233)	+	L2b	LINE/L2	2322	3375	(0)	1079654
749	32.1	4.1	2.4	chr13	81760315	81760648	(32603680)	C	MER92A	LTR/ERV1	(72)	340	1	1081932
907	15.8	0.0	0.0	chr13	81760713	81760847	(32603481)	+	AluSx	SINE/Alu	1	135	(177)	1081935
1518	8.7	0.0	0.0	chr13	81760848	81761031	(32603297)	C	AluSc8	SINE/Alu	(116)	195	12	1081936
1965	15.8	4.1	3.9	chr13	82373518	82373880	(31990448)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1082680
1115	26.2	3.6	7.3	chr13	82373881	82374032	(31990296)	+	L1M4	LINE/L1	5247	5388	(758)	1082674
5400	8.9	1.5	0.6	chr13	82706036	82707396	(31656932)	C	L1PA8	LINE/L1	(1)	6171	4760	1083114
11420	10.6	0.5	0.4	chr13	83611059	83612631	(30751697)	C	THE1B-int	LTR/ERVL-MaLR	(5)	1575	1	1084192
370	33.7	0.6	1.1	chr13	83743975	83744154	(30620174)	+	MLT1L	LTR/ERVL-MaLR	419	597	(13)	1084355
616	18.5	13.3	3.1	chr13	83894012	83894206	(30470122)	C	MER106A	DNA/hAT-Charlie	(18)	218	1	1084528
2364	17.0	9.8	4.3	chr13	84399437	84400015	(29964313)	+	LTR18B	LTR/ERVL	1	614	(0)	1085186
22648	8.7	0.8	1.5	chr13	84696140	84699444	(29664884)	+	L1PA10	LINE/L1	2369	5646	(707)	1085582
2006	14.4	5.3	1.1	chr13	85456510	85456868	(28907460)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1086577
9131	13.9	3.6	3.8	chr13	85456869	85458451	(28905877)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1086577
2821	16.1	11.6	0.9	chr13	86150243	86150794	(28213534)	C	LTR77	LTR/ERV1	(0)	622	4	1087410
1848	29.9	9.6	3.9	chr13	86150795	86152211	(28212117)	+	L1ME1	LINE/L1	2135	3636	(2683)	1087409
10356	12.4	2.1	0.0	chr13	86516623	86518168	(27846160)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1087839
2326	12.2	0.6	0.8	chr13	86518169	86518524	(27845804)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1087839
20146	14.2	1.9	1.7	chr13	86847458	86853101	(27511227)	+	L1PREC2	LINE/L1	2019	7668	(487)	1088221
26	0.0	0.0	0.0	chr13	87244574	87244598	(27119730)	+	(T)n	Simple_repeat	1	25	(0)	1088746
1033	25.6	2.4	1.7	chr13	87244612	87244901	(27119427)	+	LTR52	LTR/ERVL	44	335	(86)	1088747
735	17.8	8.0	1.1	chr13	88339278	88339550	(26024778)	+	LTR18C	LTR/ERVL	1	390	(224)	1090190
1538	21.3	10.5	1.3	chr13	88339588	88339967	(26024361)	C	L1PA12	LINE/L1	(6352)	1189	771	1090191
348	13.5	4.4	1.6	chr13	88347567	88348274	(26016054)	+	GA-rich	Low_complexity	1	739	(0)	1090202
292	34.8	9.8	4.7	chr13	89706196	89706641	(24657687)	C	LTR85b	LTR/Gypsy?	(143)	641	171	1091969
21	10.4	0.0	0.0	chr13	89706857	89706887	(24657441)	+	(TG)n	Simple_repeat	1	31	(0)	1091970
767	22.7	2.8	5.7	chr13	89741033	89741420	(24622908)	+	MER52A	LTR/ERV1	1	203	(1552)	1092020
2229	17.6	6.3	1.4	chr13	91305387	91305824	(23058504)	+	LOR1b	LTR/ERV1	1	461	(0)	1094081
1007	8.8	2.6	0.0	chr13	91497806	91497953	(22866375)	C	L1MA2	LINE/L1	(0)	6304	6153	1094327
220	35.4	3.0	3.0	chr13	91497992	91498160	(22866168)	+	L2	LINE/L2	2827	2995	(424)	1094328
18	0.0	0.0	0.0	chr13	91498240	91498259	(22866069)	+	(T)n	Simple_repeat	1	20	(0)	1094329
585	35.2	13.2	1.9	chr13	92259631	92260383	(22103945)	C	LTR78	LTR/ERV1	(429)	875	25	1095359
746	35.2	10.4	0.4	chr13	92479060	92479580	(21884748)	C	L2	LINE/L2	(1003)	2416	1838	1095624
13	16.6	0.0	0.0	chr13	92479588	92479614	(21884714)	+	(TCC)n	Simple_repeat	1	27	(0)	1095625
31	5.9	0.0	0.0	chr13	92632464	92632499	(21731829)	+	(AT)n	Simple_repeat	1	36	(0)	1095835
18	12.1	0.0	0.0	chr13	92632501	92632528	(21731800)	+	(CA)n	Simple_repeat	1	28	(0)	1095836
1165	14.5	4.5	8.4	chr13	92632680	92632878	(21731450)	C	THE1B	LTR/ERVL-MaLR	(0)	426	175	1095837
2371	10.8	0.0	0.6	chr13	92632879	92633192	(21731136)	C	AluSx	SINE/Alu	(0)	312	1	1095838
1248	28.3	10.6	1.3	chr13	95987820	95988270	(18376058)	+	LTR33	LTR/ERVL	5	502	(13)	1100949
51	0.0	0.0	0.0	chr13	96866597	96866640	(17497688)	+	(AC)n	Simple_repeat	1	44	(0)	1102178
328	26.3	2.6	0.0	chr13	96867153	96867266	(17497062)	C	Zaphod3	DNA/hAT-Tip100	(2455)	168	52	1102179
12	17.0	2.9	2.8	chr13	98493430	98493464	(15870864)	+	A-rich	Low_complexity	1	36	(0)	1104724
20	5.9	0.0	7.3	chr13	100334078	100334118	(14030210)	+	(ACAAA)n	Simple_repeat	1	41	(0)	1107803
394	21.4	6.4	4.1	chr13	100334276	100334397	(14029931)	+	MER63B	DNA/hAT-Blackjack	312	436	(0)	1107804
981	24.7	5.2	4.3	chr13	100334511	100334972	(14029356)	+	L1MEj	LINE/L1	607	1072	(1088)	1107805
559	27.9	10.2	1.1	chr13	103171200	103171430	(11192898)	+	MIRb	SINE/MIR	10	268	(0)	1111838
316	26.0	11.8	0.0	chr14	21206059	21206185	(85837533)	C	MER3	DNA/hAT-Charlie	(64)	145	2	1129272
368	26.3	9.8	7.1	chr14	21206514	21206681	(85837037)	C	MER5B	DNA/hAT-Charlie	(1)	177	5	1129273
223	27.7	18.4	3.0	chr14	22559367	22559567	(84484151)	C	MIRc	SINE/MIR	(2)	266	28	1131306
2324	11.1	0.0	0.3	chr14	22776687	22776993	(84266725)	+	AluSz6	SINE/Alu	2	307	(5)	1131682
1958	15.2	0.0	1.6	chr14	22776994	22777166	(84266552)	+	AluJb	SINE/Alu	134	305	(7)	1131681
25330	8.5	1.1	0.3	chr14	23741805	23745051	(83298667)	C	L1PA5	LINE/L1	(2879)	3267	4	1133287
247	23.9	0.0	2.7	chr14	23775313	23775385	(83268333)	+	L1ME3Cz	LINE/L1	895	965	(32)	1133321
510	30.4	1.3	0.0	chr14	23775588	23775735	(83267983)	C	L2	LINE/L2	(674)	2745	2596	1133322
1494	30.4	10.1	8.0	chr14	24931549	24932126	(82111592)	C	L2a	LINE/L2	(0)	3426	2853	1134830
1714	10.1	0.0	0.0	chr14	24932127	24932335	(82111383)	+	AluSg	SINE/Alu	1	209	(101)	1134831
410	31.8	5.7	2.3	chr14	27063084	27063302	(79980416)	C	L1MEg2	LINE/L1	(5466)	986	760	1137616
611	30.2	2.9	2.5	chr14	27063385	27063628	(79980090)	C	L1MEg2	LINE/L1	(5803)	649	405	1137616
847	30.2	4.6	13.4	chr14	27063676	27064229	(79979489)	C	L1MEg2	LINE/L1	(5935)	517	15	1137616
951	20.6	4.6	11.7	chr14	30924863	30925018	(76118700)	+	L1MC4	LINE/L1	7905	8042	(0)	1142546
421	15.5	3.0	1.0	chr14	31054242	31054339	(75989379)	+	L1MC3	LINE/L1	6975	7074	(808)	1142813
311	5.4	0.0	0.0	chr14	31054341	31054377	(75989341)	+	AluJo	SINE/Alu	89	125	(187)	1142814
2216	9.7	0.0	2.4	chr14	31054402	31054699	(75989019)	+	AluSx4	SINE/Alu	1	291	(19)	1142815
2158	14.4	0.7	0.0	chr14	31783513	31783817	(75259901)	C	AluSx1	SINE/Alu	(5)	307	1	1144178
311	35.2	6.3	2.9	chr14	35283897	35284139	(71759579)	+	L2	LINE/L2	2658	2909	(510)	1149718
338	33.3	3.3	6.7	chr14	36349476	36349729	(70693989)	+	MLT1K	LTR/ERVL-MaLR	187	431	(164)	1151465
347	33.8	8.3	6.7	chr14	36405571	36405808	(70637910)	+	L2b	LINE/L2	2508	2749	(670)	1151573
483	31.1	6.9	4.0	chr14	36405825	36406146	(70637572)	C	L2a	LINE/L2	(56)	3370	3039	1151574
297	34.0	9.4	2.1	chr14	36406284	36406612	(70637106)	+	L2b	LINE/L2	2794	3153	(222)	1151573
10633	11.9	0.9	0.2	chr14	41098804	41100373	(65943345)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1157685
2284	9.3	1.5	0.0	chr14	41100374	41100697	(65943021)	+	THE1A	LTR/ERVL-MaLR	1	329	(26)	1157685
739	21.2	4.5	0.0	chr14	41100700	41100869	(65942849)	C	L1ME1	LINE/L1	(664)	5515	5338	1157684
21473	8.4	0.4	1.0	chr14	42804271	42807122	(64236596)	+	HERVK22-int	LTR/ERVK	828	3663	(3174)	1159765
2031	28.5	9.6	7.5	chr14	43633111	43634115	(63409603)	+	L1ME3A	LINE/L1	909	1957	(4285)	1160718
1450	18.4	10.6	7.3	chr14	43634116	43634497	(63409221)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1160721
18520	13.9	2.7	1.6	chr14	43667916	43672180	(63371538)	+	L1PA13	LINE/L1	2500	6783	(0)	1160750
349	34.5	8.8	4.0	chr14	44780990	44781291	(62262427)	+	L4_C_Mam	LINE/RTE-X	2426	2743	(2395)	1162169
195	31.7	9.8	4.0	chr14	44781379	44781503	(62262215)	C	MIRb	SINE/MIR	(107)	161	29	1162170
387	32.2	5.4	8.5	chr14	45365335	45365581	(61678137)	C	LTR101_Mam	LTR/ERVL	(42)	787	549	1163101
341	24.3	10.3	7.9	chr14	45365582	45365733	(61677985)	C	MER91A	DNA/hAT-Tip100	(1)	195	40	1163102
1020	24.0	2.5	0.0	chr14	45365766	45366032	(61677686)	+	Tigger12	DNA/TcMar-Tigger	2199	2472	(3)	1163103
14193	9.4	3.5	0.0	chr14	45689630	45692443	(61351275)	+	L1PA11	LINE/L1	3283	6172	(2)	1163431
1250	17.7	0.5	2.7	chr14	45848659	45848877	(61194841)	C	MLT2B2	LTR/ERVL	(301)	214	1	1163621
1917	15.9	0.3	2.3	chr14	50166227	50166527	(56877191)	C	AluJb	SINE/Alu	(16)	296	2	1169402
1187	12.9	0.0	0.0	chr14	51972550	51972704	(55071014)	C	AluSx1	SINE/Alu	(23)	289	135	1172266
197	36.2	3.1	1.1	chr14	51972712	51972806	(55070912)	+	L2b	LINE/L2	3037	3133	(242)	1172267
350	36.5	0.7	0.0	chr14	53889054	53889190	(53154528)	C	MER117	DNA/hAT-Charlie	(58)	139	2	1175157
14138	12.8	3.0	2.0	chr14	54382990	54383340	(52660378)	+	Tigger1	DNA/TcMar-Tigger	414	755	(1663)	1175860
1577	25.6	12.1	1.5	chr14	54819652	54820485	(52223233)	+	L2a	LINE/L2	2474	3426	(0)	1176496
12	8.1	3.6	3.5	chr14	55612385	55612412	(51431306)	+	A-rich	Low_complexity	1	29	(0)	1178018
12	21.8	2.7	0.0	chr14	55612573	55612609	(51431109)	+	(TATTT)n	Simple_repeat	1	38	(0)	1178019
341	28.6	9.5	5.0	chr14	56212556	56212695	(50831023)	C	LSU-rRNA_Hsa	rRNA	(299)	4736	4590	1178936
186	25.9	5.3	0.0	chr14	59344382	59344435	(47699283)	+	L3	LINE/CR1	4025	4081	(18)	1183592
1012	29.0	1.1	1.4	chr14	59535496	59535771	(47507947)	+	L2a	LINE/L2	2633	2907	(512)	1183845
1005	26.6	9.3	1.4	chr14	59535780	59536134	(47507584)	+	ERV3-16A3_LTR	LTR/ERVL	16	401	(21)	1183846
14188	13.1	1.3	3.1	chr14	63446859	63448015	(43595703)	C	Tigger1	DNA/TcMar-Tigger	(1033)	1385	234	1189236
2476	8.0	0.0	0.0	chr14	63448016	63448317	(43595401)	+	AluY	SINE/Alu	1	302	(9)	1189239
1436	17.0	1.1	5.7	chr14	63500608	63500890	(43542828)	+	AluJr4	SINE/Alu	37	306	(6)	1189345
1319	20.1	10.0	11.0	chr14	64649422	64649687	(42394031)	+	MLT1C	LTR/ERVL-MaLR	185	461	(6)	1191663
521	29.3	12.7	7.1	chr14	64754236	64754426	(42289292)	+	LTR78B	LTR/ERV1	1	213	(1083)	1191864
332	30.2	6.9	4.1	chr14	64754427	64754595	(42289123)	+	MER5B	DNA/hAT-Charlie	1	174	(4)	1191865
9358	11.4	9.3	0.9	chr14	66731230	66732529	(40311189)	+	THE1D-int	LTR/ERVL-MaLR	15	1453	(178)	1194968
775	27.4	8.9	1.4	chr14	67739886	67740103	(39303615)	C	MLT1J2	LTR/ERVL-MaLR	(11)	437	202	1196660
349	19.3	10.2	0.0	chr14	67740163	67740250	(39303468)	C	Zaphod	DNA/hAT-Tip100	(338)	3693	3596	1196661
1784	15.8	3.9	3.9	chr14	69367238	69367600	(37676118)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	1199391
611	26.8	6.0	1.0	chr14	69819299	69819505	(37224213)	C	MIRb	SINE/MIR	(2)	266	49	1200246
1000	20.9	1.4	2.3	chr14	69819537	69819752	(37223966)	C	MER20	DNA/hAT-Charlie	(5)	214	1	1200247
5625	14.2	1.6	11.7	chr14	70878368	70879158	(36164560)	C	MER57A-int	LTR/ERV1	(5438)	749	22	1201901
1247	15.0	0.0	0.0	chr14	70879174	70879353	(36164365)	C	AluJr	SINE/Alu	(3)	309	130	1201910
1446	12.2	4.2	0.0	chr14	71350258	71350425	(35693293)	+	AluSx	SINE/Alu	133	300	(12)	1202672
398	28.2	14.9	6.7	chr14	71350719	71350988	(35692730)	+	L3	LINE/CR1	2861	3156	(943)	1202658
447	26.7	13.8	1.1	chr14	71550591	71550779	(35492939)	+	L2a	LINE/L2	2239	2455	(964)	1203004
1044	14.3	1.3	0.0	chr14	71550793	71550939	(35492779)	+	AluJo	SINE/Alu	25	173	(139)	1203005
470	30.3	7.9	5.9	chr14	71550975	71551160	(35492558)	+	L2a	LINE/L2	2974	3163	(263)	1203006
379	14.8	0.0	0.0	chr14	71551169	71551222	(35492496)	+	FRAM	SINE/Alu	42	95	(81)	1203007
467	20.2	6.4	1.9	chr14	71700272	71700375	(35343343)	+	FLAM_A	SINE/Alu	22	130	(12)	1203205
15	8.4	10.5	0.0	chr14	72893589	72893626	(34150092)	+	G-rich	Low_complexity	1	42	(0)	1205033
14	11.2	4.5	6.5	chr14	72893893	72893936	(34149782)	+	GA-rich	Low_complexity	1	46	(0)	1205034
2216	15.4	2.2	0.0	chr14	79720033	79720388	(27323330)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1218229
5758	12.6	0.9	0.4	chr14	81918061	81918973	(25124745)	+	L1MA4A	LINE/L1	5386	6302	(1)	1221364
11499	18.9	2.9	0.6	chr14	82057332	82059749	(24983969)	C	ERVL-int	LTR/ERVL	(0)	5654	3209	1221587
243	26.5	0.0	8.1	chr14	82194469	82194523	(24849195)	C	L1M7	LINE/L1	(148)	2385	2339	1221774
2015	15.2	3.6	2.8	chr14	82194524	82194882	(24848836)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1221775
389	10.3	0.0	3.4	chr14	82194883	82194948	(24848770)	C	L1M7	LINE/L1	(4298)	2013	1941	1221774
398	31.8	5.1	3.0	chr14	82194931	82195196	(24848522)	C	L1M7	LINE/L1	(4507)	1804	1533	1221774
333	36.0	7.2	6.2	chr14	84572290	84572647	(22471071)	+	L2c	LINE/L2	3026	3387	(0)	1224964
212	36.4	7.5	1.7	chr14	84572712	84572887	(22470831)	C	L2a	LINE/L2	(71)	3355	3169	1224965
18	8.7	0.0	0.0	chr14	85587288	85587312	(21456406)	+	(A)n	Simple_repeat	1	25	(0)	1226464
6499	11.1	0.6	0.1	chr14	86174415	86175310	(20868408)	+	THE1B-int	LTR/ERVL-MaLR	679	1578	(2)	1227241
2098	15.4	1.9	2.2	chr14	86175313	86175677	(20868041)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1227241
32	25.7	2.9	4.3	chr14	86175678	86175811	(20867907)	+	GA-rich	Low_complexity	3	134	(0)	1227242
16	9.8	0.0	0.0	chr14	87036711	87036732	(20006986)	+	(T)n	Simple_repeat	1	22	(0)	1228363
3211	18.1	3.0	6.6	chr14	88397188	88397322	(18646396)	C	L1MB3	LINE/L1	(609)	5574	5452	1230388
1815	17.7	5.2	0.0	chr14	88397377	88397670	(18646048)	+	AluJb	SINE/Alu	3	312	(0)	1230390
443	27.5	10.8	7.0	chr14	89652707	89652845	(17390873)	C	Charlie23a	DNA/hAT-Charlie	(0)	339	195	1232462
2431	8.9	0.0	0.0	chr14	89652846	89653147	(17390571)	+	AluSz6	SINE/Alu	6	307	(5)	1232463
449	26.8	4.2	1.4	chr14	92916557	92916696	(14127022)	C	MIRb	SINE/MIR	(104)	164	21	1238505
187	24.6	8.5	3.0	chr14	95008967	95009033	(12034685)	+	X6A_LINE	LINE/CR1	552	622	(458)	1242297
481	24.9	12.1	6.9	chr14	95009125	95009327	(12034391)	+	MIRb	SINE/MIR	12	226	(42)	1242298
14	20.9	1.8	5.4	chr14	95877089	95877143	(11166575)	+	(CTCCGG)n	Simple_repeat	1	56	(0)	1243877
393	30.1	5.0	1.6	chr14	104236372	104236540	(2807178)	C	L1MEc	LINE/L1	(4994)	1406	1235	1258213
2029	19.8	9.4	3.1	chr14	104236555	104237039	(2806679)	C	MER74A	LTR/ERVL	(0)	558	40	1258215
395	22.5	9.9	7.2	chr14	104237058	104237291	(2806427)	C	L1MEb	LINE/L1	(5057)	1252	1089	1258216
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
14361	15.8	7.8	0.8	chr15	20421630	20422490	(81568699)	C	L1PA16	LINE/L1	(5)	6498	5577	1263304
3106	22.1	7.7	4.2	chr15	25113933	25114299	(76876890)	+	L1M4a1	LINE/L1	3098	3499	(2820)	1269726
5244	20.7	4.9	3.9	chr15	26905187	26906601	(75084588)	C	L1M4	LINE/L1	(5539)	1978	549	1272040
290	31.0	4.4	3.1	chr15	28021513	28021676	(73969513)	+	L1MCc	LINE/L1	617	720	(5702)	1273318
484	29.9	4.6	2.5	chr15	28021901	28022175	(73969014)	+	L1MCc	LINE/L1	1141	1421	(5002)	1273318
1373	15.6	5.8	0.0	chr15	34326684	34326858	(67664331)	C	AluJb	SINE/Alu	(4)	308	121	1282689
723	33.6	11.7	1.7	chr15	35746875	35747228	(66243961)	+	L2b	LINE/L2	2550	2943	(476)	1284776
1648	18.2	2.0	1.7	chr15	39142237	39142532	(62848657)	+	AluJo	SINE/Alu	1	297	(15)	1289298
1120	15.7	6.2	4.0	chr15	39142555	39142920	(62848269)	+	MSTA	LTR/ERVL-MaLR	1	422	(6)	1289299
17	31.3	2.7	0.0	chr15	40470879	40470953	(61520236)	+	(GCCCCC)n	Simple_repeat	1	77	(0)	1291233
17	11.8	1.8	8.9	chr15	40471014	40471070	(61520119)	+	(CCGCCGC)n	Simple_repeat	1	52	(0)	1291234
539	27.1	12.5	0.5	chr15	40805999	40806202	(61184987)	+	LTR16E1	LTR/ERVL	1	232	(306)	1291965
2567	6.5	0.7	0.0	chr15	40806210	40806516	(61184673)	C	AluSx4	SINE/Alu	(1)	309	1	1291966
971	31.6	10.3	2.4	chr15	42134184	42134747	(59856442)	+	L1MEi	LINE/L1	699	1322	(5781)	1294618
17	0.0	0.0	0.0	chr15	43479195	43479216	(58511973)	+	(CAGA)n	Simple_repeat	1	22	(0)	1297069
5915	22.2	10.8	5.6	chr15	45990737	45991483	(55999706)	C	L1MC2	LINE/L1	(5341)	1526	814	1301669
2695	25.2	4.2	3.1	chr15	46326841	46328097	(55663092)	C	L1ME2	LINE/L1	(9)	6391	5124	1302023
2564	4.7	0.0	3.1	chr15	50358014	50358330	(51632859)	+	AluY	SINE/Alu	1	307	(4)	1307575
197	29.5	18.1	0.0	chr15	50358341	50358462	(51632727)	C	L2a	LINE/L2	(727)	2692	2544	1307573
1083	13.7	15.8	3.4	chr15	50358469	50358732	(51632457)	C	Charlie5	DNA/hAT-Charlie	(86)	2538	2236	1307576
16	12.3	0.0	7.3	chr15	51391296	51391336	(50599853)	+	GA-rich	Low_complexity	1	41	(0)	1309492
3175	26.0	5.5	8.9	chr15	53368776	53370458	(48620731)	+	L1MEg	LINE/L1	6	1628	(4456)	1312707
283	21.7	0.0	6.2	chr15	55015031	55015094	(46976095)	C	MIR	SINE/MIR	(14)	248	189	1314839
2102	21.1	7.1	2.8	chr15	61796135	61796642	(40194547)	C	L1ME1	LINE/L1	(285)	5894	5363	1325921
2584	20.2	6.4	1.1	chr15	61796643	61797297	(40193892)	C	Arthur1	DNA/hAT-Tip100	(383)	3564	2873	1325918
3149	26.7	10.0	5.1	chr15	61997103	61998412	(39992777)	+	L2a	LINE/L2	1992	3358	(68)	1326188
1122	14.2	6.4	3.7	chr15	62923423	62923495	(39067694)	+	L1MA5	LINE/L1	6047	6111	(189)	1327631
1864	13.0	1.1	0.0	chr15	62923496	62923757	(39067432)	C	AluJb	SINE/Alu	(21)	291	27	1327632
1110	14.5	13.3	4.1	chr15	65255262	65255506	(36735683)	+	ORSL	DNA/hAT-Tip100	5	275	(0)	1332224
227	25.4	2.9	1.5	chr15	65255590	65255657	(36735532)	+	L2c	LINE/L2	3270	3338	(49)	1332225
26	3.3	0.0	0.0	chr15	65255744	65255774	(36735415)	+	(A)n	Simple_repeat	1	31	(0)	1332226
499	27.2	11.2	0.5	chr15	65255987	65256193	(36734996)	+	L2c	LINE/L2	1972	2203	(1216)	1332227
236	20.0	14.1	0.0	chr15	65402247	65402301	(36588888)	+	Plat_L3	LINE/CR1	3509	3572	(14)	1332539
1375	24.9	9.6	3.4	chr15	65402546	65402586	(36588603)	+	L1ME4b	LINE/L1	151	183	(709)	1332540
2415	6.7	0.7	0.0	chr15	65402587	65402884	(36588305)	+	AluSp	SINE/Alu	1	300	(13)	1332541
2181	14.9	0.3	0.0	chr15	65466142	65466437	(36524752)	C	AluSz6	SINE/Alu	(15)	297	1	1332693
314	29.4	11.5	4.8	chr15	67446534	67446783	(34544406)	C	AmnSINE1	SINE/5S-Deu-L2	(98)	477	209	1336621
188	22.2	12.9	2.4	chr15	67681093	67681175	(34310014)	C	MIRb	SINE/MIR	(14)	254	162	1336988
26	0.0	0.0	5.9	chr15	67681179	67681212	(34309977)	+	(ATCAGAT)n	Simple_repeat	1	34	(0)	1336989
1873	16.9	2.0	0.3	chr15	68166825	68167120	(33824069)	C	AluJo	SINE/Alu	(11)	301	1	1337846
20	12.1	0.0	2.6	chr15	68167183	68167191	(33823998)	+	(TATGTG)n	Simple_repeat	1	38	(0)	1337847
263	23.4	3.8	7.4	chr15	68404864	68405007	(33586182)	C	MIRb	SINE/MIR	(58)	210	69	1338279
552	30.2	5.3	2.7	chr15	68405265	68405448	(33585741)	+	MER117	DNA/hAT-Charlie	2	190	(7)	1338280
294	20.2	8.2	4.3	chr15	68566130	68566222	(33424967)	C	MIR	SINE/MIR	(46)	216	120	1338572
637	28.5	1.2	0.6	chr15	68566254	68566412	(33424777)	C	MIR	SINE/MIR	(91)	171	12	1338573
8383	21.4	11.2	2.7	chr15	69214606	69215539	(32775650)	C	L1MD3	LINE/L1	(1342)	6653	5684	1339817
1370	25.4	1.8	4.2	chr15	70560253	70560659	(31430530)	C	MLT2C1	LTR/ERVL	(0)	397	1	1342370
1965	17.0	0.6	8.9	chr15	72049515	72049883	(29941306)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	1344810
17	8.9	0.0	0.0	chr15	72050148	72050171	(29941018)	+	(T)n	Simple_repeat	1	24	(0)	1344811
231	38.1	4.5	2.9	chr15	72050272	72050327	(29940862)	C	MER5A	DNA/hAT-Charlie	(11)	178	121	1344812
2352	10.4	0.3	0.0	chr15	72050328	72050634	(29940555)	+	AluY	SINE/Alu	2	309	(2)	1344813
439	27.3	13.6	0.0	chr15	73924134	73924298	(28066891)	C	MIRb	SINE/MIR	(36)	232	42	1347949
216	30.3	1.3	0.0	chr15	75842893	75842968	(26148221)	C	L2a	LINE/L2	(676)	2743	2667	1351618
15	20.0	6.8	1.6	chr15	76178232	76178290	(25812899)	+	(TGGAGAC)n	Simple_repeat	1	63	(0)	1352138
7396	17.9	5.0	2.4	chr15	76588740	76590212	(25400977)	C	L1PBa1	LINE/L1	(5092)	1770	258	1352800
1442	28.0	5.1	0.3	chr15	76799600	76799989	(25191200)	+	MER70A	LTR/ERVL	23	432	(40)	1353056
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
1882	10.9	8.1	1.1	chr15	80069651	80069907	(21921282)	C	AluSg4	SINE/Alu	(30)	280	1	1358928
1922	24.1	6.5	2.3	chr15	80320831	80321361	(21669828)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	3	1359356
299	26.3	4.0	0.0	chr15	81048410	81048504	(20942685)	C	MIR3	SINE/MIR	(5)	203	105	1360603
1394	22.0	8.7	3.9	chr15	81118757	81119429	(20871760)	C	MER101-int	LTR/ERV1	(1299)	5032	3925	1360747
442	28.8	9.2	1.1	chr15	82132248	82132517	(19858672)	+	L1MEi	LINE/L1	1329	1622	(590)	1362418
279	22.4	13.6	0.0	chr15	83010650	83010725	(18980464)	+	L2c	LINE/L2	3291	3378	(9)	1363866
420	35.0	8.7	3.7	chr15	83010833	83011235	(18979954)	C	L2c	LINE/L2	(36)	3351	2927	1363867
296	33.9	9.4	4.0	chr15	83308829	83309024	(18682165)	+	L2c	LINE/L2	3002	3207	(180)	1364396
611	25.1	6.1	2.0	chr15	83536772	83537023	(18454166)	C	HAL1ME	LINE/L1	(1373)	1092	830	1364780
426	25.2	19.6	0.0	chr15	83537102	83537347	(18453842)	C	HAL1ME	LINE/L1	(1748)	717	412	1364780
454	24.8	14.2	0.0	chr15	83537361	83537493	(18453696)	C	MIR	SINE/MIR	(2)	260	106	1364781
2009	11.8	6.6	1.1	chr15	83959145	83959416	(18031773)	+	AluSz	SINE/Alu	2	289	(23)	1365412
2284	23.1	12.8	5.9	chr15	83959417	83959708	(18031481)	+	L1M8	LINE/L1	1373	1671	(684)	1365411
508	35.2	8.0	9.5	chr15	86765263	86765683	(15225506)	C	L2c	LINE/L2	(9)	3378	2953	1369877
520	35.6	12.4	5.7	chr15	87624991	87625589	(14365600)	C	L2	LINE/L2	(644)	2775	2131	1371072
1335	23.9	18.2	1.4	chr15	88356339	88356783	(13634406)	C	MLT1G	LTR/ERVL-MaLR	(52)	539	3	1372250
1139	27.8	12.2	1.7	chr15	88824902	88825204	(13165985)	C	L2a	LINE/L2	(195)	3231	2868	1373092
186	29.5	11.2	5.7	chr15	89178995	89179170	(12812019)	C	L2a	LINE/L2	(68)	3319	3133	1373783
2716	13.7	0.7	7.5	chr15	89179240	89179729	(12811460)	+	MER1A	DNA/hAT-Charlie	47	502	(27)	1373784
18	21.4	3.7	0.0	chr15	90128870	90128885	(11862304)	+	G-rich	Low_complexity	1	55	(0)	1375688
2445	9.4	0.0	0.3	chr15	90978470	90978778	(11012411)	+	AluSq2	SINE/Alu	1	308	(5)	1377458
690	25.2	13.9	5.3	chr15	90978779	90978984	(11012205)	+	MLT1J	LTR/ERVL-MaLR	267	477	(35)	1377457
207	29.5	10.4	3.0	chr15	92935955	92936087	(9055102)	C	L2c	LINE/L2	(12)	3375	3232	1380777
214	34.5	6.5	3.5	chr15	93974706	93974815	(8016374)	C	MIR	SINE/MIR	(139)	129	15	1382429
271	28.0	5.7	1.5	chr15	95601716	95601849	(6389340)	C	L1MC4	LINE/L1	(144)	7898	7759	1384688
410	32.7	11.3	0.8	chr15	95601980	95602215	(6388974)	+	MIRb	SINE/MIR	1	259	(3)	1384689
12	25.9	6.1	1.4	chr15	95602277	95602342	(6388847)	+	A-rich	Low_complexity	1	70	(0)	1384690
1173	22.2	9.0	6.6	chr15	97021570	97021949	(4969240)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1386682
2403	6.6	0.0	1.3	chr16	389720	390020	(89948325)	+	AluYc	SINE/Alu	2	298	(1)	1394666
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
2398	9.7	0.0	0.3	chr16	3904534	3904842	(86433503)	+	AluYk2	SINE/Alu	2	309	(2)	1400035
471	12.9	0.0	0.0	chr16	3904850	3904911	(86433434)	C	AluJr	SINE/Alu	(194)	118	57	1400036
233	23.1	3.7	9.6	chr16	3905141	3905255	(86433090)	+	L1ME5	LINE/L1	6086	6193	(1)	1400037
1877	15.9	4.4	4.3	chr16	4026830	4027367	(86310978)	+	MER51A	LTR/ERV1	16	640	(0)	1400286
2444	10.0	1.4	6.5	chr16	4027379	4027596	(86310749)	C	THE1B	LTR/ERVL-MaLR	(0)	364	165	1400287
2357	10.9	0.0	0.0	chr16	4027597	4027900	(86310445)	+	AluSq2	SINE/Alu	3	306	(7)	1400288
2200	19.4	4.1	2.0	chr16	10642128	10642627	(79695718)	+	MER74A	LTR/ERVL	10	520	(38)	1413908
876	28.7	8.4	3.7	chr16	11997080	11997480	(78340865)	+	L2a	LINE/L2	2867	3296	(130)	1417014
1990	16.8	0.0	0.3	chr16	11997481	11997778	(78340567)	C	AluJb	SINE/Alu	(15)	297	1	1417015
269	31.2	0.0	0.0	chr16	13793591	13793667	(76544678)	C	MIR3	SINE/MIR	(55)	153	77	1420877
2123	10.1	0.6	11.5	chr16	13898789	13899136	(76439209)	+	AluSx1	SINE/Alu	3	312	(0)	1421110
2209	12.8	0.7	1.3	chr16	13899422	13899727	(76438618)	+	AluSz	SINE/Alu	1	304	(8)	1421111
352	24.8	2.1	4.9	chr16	14475905	14476048	(75862297)	+	L1ME2	LINE/L1	1952	2091	(4309)	1422232
587	32.7	7.2	7.8	chr16	19231746	19232093	(71106252)	C	L2b	LINE/L2	(19)	3356	3011	1433044
302	27.7	3.0	7.1	chr16	20256005	20256144	(70082201)	C	MIRb	SINE/MIR	(21)	247	114	1435493
262	26.2	0.0	2.3	chr16	22842947	22843032	(67495313)	C	L1MA8	LINE/L1	(6228)	875	792	1440932
450	17.4	3.4	3.4	chr16	22843066	22843154	(67495191)	C	MER21A	LTR/ERVL	(6)	925	837	1440934
18	0.0	0.0	0.0	chr16	22843157	22843176	(67495169)	+	(TG)n	Simple_repeat	1	20	(0)	1440935
1723	16.1	8.8	7.0	chr16	22843268	22844008	(67494337)	C	MER21A	LTR/ERVL	(96)	835	17	1440934
34	24.9	1.7	3.4	chr16	25692377	25692492	(64645853)	+	(GCC)n	Simple_repeat	1	118	(0)	1447513
27	26.2	2.9	2.8	chr16	25692620	25692724	(64645621)	+	(CGC)n	Simple_repeat	1	108	(0)	1447514
827	25.0	10.3	0.0	chr16	27434696	27434895	(62903450)	C	MIRb	SINE/MIR	(15)	253	31	1451140
450	22.9	17.8	7.3	chr16	28130361	28130703	(62207642)	+	CR1_Mam	LINE/CR1	1131	1517	(687)	1452705
1985	16.9	0.3	0.6	chr16	28490787	28491099	(61847246)	+	AluJr	SINE/Alu	1	312	(0)	1453671
332	21.9	7.7	6.6	chr16	28491164	28491329	(61847016)	+	MER113	DNA/hAT-Charlie	348	515	(6)	1453672
340	30.2	9.1	2.8	chr16	28978409	28978728	(61359617)	+	L2-3_Crp	LINE/L2	704	1045	(1051)	1454905
12089	16.4	1.7	2.9	chr16	30544918	30546615	(59791730)	C	HERVFH21-int	LTR/ERV1	(4215)	2314	656	1458305
3776	5.0	1.5	2.6	chr16	30546616	30546871	(59791474)	C	LTR2	LTR/ERV1	(0)	463	219	1458307
2469	6.4	0.0	0.0	chr16	30546872	30547166	(59791179)	C	AluY	SINE/Alu	(16)	295	1	1458308
1176	13.5	0.0	22.0	chr16	31145451	31145657	(59192688)	+	AluSz6	SINE/Alu	132	301	(11)	1459695
2037	9.5	3.6	1.4	chr16	31457464	31457757	(58880588)	C	AluSz	SINE/Alu	(11)	301	1	1460364
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
1838	15.2	1.0	1.4	chr16	47077354	47077648	(43260697)	+	AluJb	SINE/Alu	1	294	(18)	1466697
5866	16.4	1.3	3.5	chr16	47937254	47938075	(42400270)	C	L1MC4	LINE/L1	(5709)	799	1	1467833
4540	13.6	3.3	0.0	chr16	47938107	47938842	(42399503)	+	L1PA17	LINE/L1	3826	4586	(1560)	1467839
227	28.5	11.8	4.2	chr16	48433519	48433807	(41904538)	+	L2c	LINE/L2	2925	3238	(149)	1468778
597	21.9	8.9	3.2	chr16	48433937	48434125	(41904220)	C	MIRc	SINE/MIR	(66)	202	2	1468779
20	24.9	2.7	2.6	chr16	50393481	50393555	(39944790)	+	(GTCT)n	Simple_repeat	1	77	(0)	1472378
249	30.6	2.4	0.8	chr16	53719081	53719202	(36619143)	C	L1ME4a	LINE/L1	(2454)	3692	3569	1478303
27	3.5	0.0	0.0	chr16	53719226	53719255	(36619090)	+	(CTT)n	Simple_repeat	1	30	(0)	1478304
952	11.6	16.2	0.0	chr16	53719256	53719410	(36618935)	C	AluSx	SINE/Alu	(10)	302	118	1478305
369	23.1	10.8	0.9	chr16	55508742	55508850	(34829495)	C	MIRb	SINE/MIR	(112)	156	36	1481573
1854	16.1	9.3	4.8	chr16	58388603	58388979	(31949366)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1486992
1996	19.5	3.3	1.2	chr16	59851861	59852276	(30486069)	+	MSTB1	LTR/ERVL-MaLR	6	430	(2)	1489432
246	30.4	7.7	2.4	chr16	61086332	61086540	(29251805)	C	Charlie13b	DNA/hAT-Charlie	(170)	342	122	1491321
449	32.6	11.6	0.5	chr16	61086552	61086742	(29251603)	+	MIR	SINE/MIR	14	228	(34)	1491322
994	33.7	6.0	5.0	chr16	64684559	64685084	(25653261)	+	L2a	LINE/L2	2883	3425	(1)	1496719
281	28.3	2.1	1.1	chr16	64685816	64685908	(25652437)	+	MLT1G1	LTR/ERVL-MaLR	468	561	(18)	1496721
2249	18.4	1.9	1.2	chr16	65194715	65195194	(25143151)	C	L1MA4A	LINE/L1	(820)	5323	4841	1497574
576	34.9	5.5	0.8	chr16	65195195	65195434	(25142911)	+	MIRb	SINE/MIR	3	254	(14)	1497577
252	32.8	9.1	6.4	chr16	65195442	65195643	(25142702)	+	L2b	LINE/L2	3147	3354	(21)	1497578
1073	17.3	4.1	6.3	chr16	65682017	65682238	(24656107)	+	MER20	DNA/hAT-Charlie	3	219	(0)	1498350
271	31.9	0.0	0.0	chr16	65870949	65871017	(24467328)	C	L2b	LINE/L2	(4)	3371	3303	1498668
238	30.7	0.0	0.0	chr16	65871229	65871303	(24467042)	+	LTR67B	LTR/ERVL	385	459	(161)	1498669
318	26.5	5.8	2.0	chr16	65871355	65871454	(24466891)	C	MER63B	DNA/hAT-Blackjack	(7)	429	326	1498670
1298	20.1	2.3	0.4	chr16	65871468	65871722	(24466623)	C	MER63B	DNA/hAT-Blackjack	(176)	260	1	1498670
60	22.3	2.1	4.1	chr16	67029050	67029240	(23309105)	+	(GGC)n	Simple_repeat	1	195	(0)	1500922
12	9.8	0.0	0.0	chr16	67029661	67029682	(23308663)	+	(GGGC)n	Simple_repeat	1	22	(0)	1500923
14	21.1	3.8	3.6	chr16	67029855	67029907	(23308438)	+	(GCG)n	Simple_repeat	1	55	(0)	1500924
1849	16.6	2.3	0.0	chr16	67287398	67287692	(23050653)	C	AluJr	SINE/Alu	(10)	302	1	1501375
266	25.4	17.4	9.6	chr16	67287693	67287750	(23050595)	+	MIRb	SINE/MIR	130	187	(81)	1501374
1850	12.6	7.3	0.0	chr16	68520091	68520368	(21817977)	C	AluSg	SINE/Alu	(9)	301	2	1503685
920	3.5	14.7	0.0	chr16	68520369	68520484	(21817861)	C	AluSq10	SINE/Alu	(177)	136	1	1503686
363	29.7	9.4	1.3	chr16	69017658	69017814	(21320531)	C	MIR3	SINE/MIR	(21)	187	17	1504880
932	12.6	0.0	1.6	chr16	69287894	69288020	(21050325)	+	AluJb	SINE/Alu	1	125	(187)	1505502
2194	12.5	0.0	0.3	chr16	71915828	71916131	(18422214)	C	AluSz	SINE/Alu	(9)	303	1	1510636
588	31.7	8.8	2.7	chr16	73741712	73742042	(16596303)	C	L4_A_Mam	LINE/RTE-X	(8)	4982	4630	1513463
2496	6.9	0.0	0.3	chr16	74945195	74945498	(15392847)	+	AluY	SINE/Alu	1	303	(8)	1515765
1576	14.8	8.5	7.3	chr16	74945716	74945815	(15392530)	+	MER44A	DNA/TcMar-Tigger	9	128	(211)	1515766
623	27.0	11.7	0.8	chr16	77049323	77049557	(13288788)	+	LTR16C	LTR/ERVL	222	485	(4)	1519190
1973	17.3	1.3	0.0	chr16	77050022	77050321	(13288024)	+	AluJb	SINE/Alu	1	304	(8)	1519191
354	26.0	5.8	16.6	chr16	77939277	77939511	(12398834)	+	MER63A	DNA/hAT-Blackjack	3	210	(0)	1520787
301	20.8	14.4	4.7	chr16	82267341	82267446	(8070899)	+	MIRc	SINE/MIR	45	162	(106)	1528937
506	20.6	11.9	9.1	chr16	82267448	82267634	(8070711)	C	LTR16A2	LTR/ERVL	(1)	494	302	1528938
113	22.4	3.7	2.1	chr16	82267654	82267974	(8070371)	+	(CTTCTC)n	Simple_repeat	1	333	(0)	1528939
415	34.4	0.7	7.8	chr16	83552127	83552293	(6786052)	C	MER115	DNA/hAT-Tip100	(476)	217	63	1531201
2514	5.7	0.3	0.0	chr16	83939888	83940187	(6398158)	+	AluY	SINE/Alu	1	301	(10)	1531886
657	30.4	5.7	1.2	chr16	83940188	83940281	(6398064)	+	L1ME3	LINE/L1	6002	6099	(63)	1531885
298	34.3	9.7	5.1	chr16	83940381	83940868	(6397477)	C	L2b	LINE/L2	(52)	3323	2814	1531887
878	22.2	4.4	0.9	chr16	84390583	84390800	(5947545)	+	L1MB5	LINE/L1	5948	6173	(1)	1532746
529	34.6	3.2	0.0	chr16	87909847	87910086	(2428259)	+	MIR	SINE/MIR	1	248	(14)	1539293
16	0.0	4.3	0.0	chr16	87910087	87910109	(2428236)	+	(ACAA)n	Simple_repeat	1	24	(0)	1539294
14	23.1	3.4	3.3	chr16	89093689	89093747	(1244598)	+	(CCACGG)n	Simple_repeat	1	61	(0)	1540793
16	9.2	0.0	9.5	chr16	89313931	89313957	(1024388)	+	A-rich	Low_complexity	1	25	(0)	1541065
1459	17.8	5.1	9.2	chr16	89313958	89314297	(1024048)	+	AluJb	SINE/Alu	1	312	(0)	1541066
362	32.4	2.8	2.8	chr16	89602098	89602275	(736070)	+	MLT1F1	LTR/ERVL-MaLR	392	569	(0)	1541524
271	26.1	5.1	5.1	chr17	2828430	2828546	(80428895)	C	L2a	LINE/L2	(284)	3142	3026	1550047
872	22.8	1.8	2.6	chr17	4057709	4057938	(79199503)	C	MIR	SINE/MIR	(27)	235	8	1552266
816	29.1	4.3	3.5	chr17	5720233	5720460	(77536981)	C	MIRb	SINE/MIR	(14)	254	25	1555684
1689	15.0	1.3	8.1	chr17	6837931	6838250	(76419191)	C	AluJr	SINE/Alu	(14)	298	1	1557795
501	27.5	2.4	0.0	chr17	6838251	6838370	(76419071)	+	MIRb	SINE/MIR	84	206	(62)	1557796
1551	14.0	4.0	8.0	chr17	6838371	6838590	(76418851)	C	THE1D	LTR/ERVL-MaLR	(0)	381	162	1557797
2618	8.6	0.0	0.0	chr17	6838591	6838891	(76418550)	+	AluSx1	SINE/Alu	1	301	(11)	1557798
1844	15.5	0.0	0.0	chr17	7800882	7801172	(75456269)	C	AluJb	SINE/Alu	(21)	291	1	1559551
2162	10.0	0.3	2.3	chr17	8612569	8612869	(74644572)	+	AluSg	SINE/Alu	1	295	(15)	1561090
1453	12.8	6.4	7.0	chr17	8612870	8612990	(74644451)	+	Tigger7	DNA/TcMar-Tigger	2383	2490	(1)	1561089
840	22.5	2.2	7.5	chr17	8612993	8613285	(74644156)	+	L1ME3B	LINE/L1	1484	1760	(4655)	1561086
1705	15.5	6.9	6.9	chr17	9380579	9380709	(73876732)	+	Tigger3a	DNA/TcMar-Tigger	2	127	(221)	1562595
2007	11.8	2.3	3.0	chr17	9380710	9381014	(73876427)	C	AluSz	SINE/Alu	(9)	303	1	1562596
603	22.9	2.1	2.1	chr17	9484993	9485134	(73772307)	+	FLAM_C	SINE/Alu	2	230	(72)	1562804
34	17.0	8.4	3.1	chr17	10983311	10983429	(72274012)	+	(AT)n	Simple_repeat	1	129	(0)	1565646
247	23.7	6.1	5.1	chr17	12815564	12815661	(70441780)	C	MIRc	SINE/MIR	(119)	149	51	1568706
354	26.0	2.5	0.0	chr17	12815663	12815739	(70441702)	+	L1MD2	LINE/L1	848	926	(5621)	1568707
3796	14.4	2.5	7.2	chr17	13965319	13965999	(69291442)	C	LTR1C1	LTR/ERV1	(0)	648	1	1570665
2925	17.7	3.4	0.3	chr17	13966000	13966569	(69290872)	C	HUERS-P2-int	LTR/ERV1	(0)	3088	2467	1570665
1941	19.6	12.7	0.5	chr17	21526842	21527271	(61730170)	C	LTR53-int	LTR/ERVL	(2182)	1147	658	1584400
4168	11.0	2.4	7.8	chr17	21527283	21527421	(61730020)	C	MER41B	LTR/ERV1	(0)	634	508	1584402
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1894	15.1	1.4	0.0	chr17	27548560	27548844	(55708597)	+	AluSx	SINE/Alu	13	301	(11)	1587018
440	25.8	15.0	1.6	chr17	28283481	28283665	(54973776)	+	MIRc	SINE/MIR	47	260	(8)	1588381
2489	9.4	0.0	0.0	chr17	28416326	28416634	(54840807)	C	AluSx3	SINE/Alu	(1)	310	2	1588631
245	20.3	5.5	2.8	chr17	28416649	28416719	(54840722)	+	Tigger8	DNA/TcMar-Tigger	214	286	(381)	1588632
12	17.1	4.9	2.3	chr17	28905835	28905875	(54351566)	+	G-rich	Low_complexity	1	43	(0)	1589598
432	22.6	5.7	2.2	chr17	29598186	29598321	(53659120)	+	MamRep4096	DNA/hAT-Tip100	9	149	(277)	1590976
233	27.3	15.7	3.2	chr17	29598330	29598484	(53658957)	C	HAL1	LINE/L1	(22)	2485	2308	1590977
27	3.1	0.0	2.9	chr17	29598495	29598529	(53658912)	+	(CTCC)n	Simple_repeat	1	35	(0)	1590978
2106	13.4	0.3	1.6	chr17	29598535	29598840	(53658601)	C	AluJb	SINE/Alu	(0)	312	11	1590979
2236	10.7	0.7	0.7	chr17	30729156	30729464	(52527977)	C	AluSx1	SINE/Alu	(3)	309	1	1593142
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
292	34.2	16.3	4.2	chr17	34498910	34499877	(48757564)	C	L2c	LINE/L2	(185)	3202	2110	1600510
454	16.5	3.4	0.0	chr17	34499916	34500000	(48757441)	+	L2	LINE/L2	2753	2840	(579)	1600512
1393	26.3	7.8	1.2	chr17	34500015	34500549	(48756892)	+	L2a	LINE/L2	2856	3426	(0)	1600513
2583	11.4	0.8	0.0	chr17	34920712	34921063	(48336378)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1601330
3848	15.2	7.2	0.1	chr17	34921183	34921875	(48335566)	+	L1MB3	LINE/L1	5435	6180	(3)	1601331
201	30.0	3.8	5.4	chr17	35120054	35120243	(48137198)	C	L2b	LINE/L2	(27)	3399	3217	1601737
7575	16.3	3.6	0.7	chr17	35368236	35369590	(47887851)	+	L1MA1	LINE/L1	188	1584	(5981)	1602147
18	0.0	0.0	0.0	chr17	41974005	41974024	(41283417)	+	(T)n	Simple_repeat	1	20	(0)	1614696
2542	5.5	0.0	1.0	chr17	42692950	42693258	(40564183)	C	AluY	SINE/Alu	(5)	306	1	1616162
2499	7.1	1.0	0.0	chr17	43020596	43020905	(40236536)	+	AluSp	SINE/Alu	1	313	(0)	1616896
301	29.8	16.6	6.0	chr17	43208454	43208635	(40048806)	C	MIRb	SINE/MIR	(48)	220	16	1617313
256	18.0	6.8	8.9	chr17	43208574	43208680	(40048761)	+	MIR	SINE/MIR	45	159	(103)	1617314
1451	18.5	3.5	8.3	chr17	45857347	45857827	(37399614)	C	L1MB3	LINE/L1	(693)	5490	5029	1622914
366	31.6	10.0	3.6	chr17	45858279	45858501	(37398940)	C	MLT1O	LTR/ERVL-MaLR	(8)	534	296	1622920
1385	27.6	0.3	2.1	chr17	46106867	46107254	(37150187)	+	L1MDb	LINE/L1	13	393	(6016)	1623386
2755	25.0	14.0	3.3	chr17	46107255	46108651	(37148790)	+	L2a	LINE/L2	1846	3417	(9)	1623387
1616	16.9	6.7	0.0	chr17	46174689	46174955	(37082486)	C	AluJb	SINE/Alu	(26)	286	1	1623505
306	19.4	0.0	2.9	chr17	46175013	46175081	(37082360)	+	Charlie1b	DNA/hAT-Charlie	457	523	(0)	1623506
2066	11.9	1.4	0.0	chr17	47110927	47111262	(36146179)	C	AluSx	SINE/Alu	(0)	312	1	1625363
312	28.0	6.2	12.3	chr17	47230390	47230666	(36026775)	C	L2c	LINE/L2	(3)	3384	3126	1625612
15	19.0	4.8	0.0	chr17	47230775	47230816	(36026625)	+	GA-rich	Low_complexity	1	44	(0)	1625613
1744	14.3	4.0	2.7	chr17	47230944	47231237	(36026204)	+	AluJb	SINE/Alu	1	298	(14)	1625614
647	29.2	10.2	0.3	chr17	47324759	47325030	(35932411)	+	L2a	LINE/L2	1777	2083	(1336)	1625798
1454	17.4	4.4	4.4	chr17	47325031	47325324	(35932117)	C	AluJr	SINE/Alu	(18)	294	1	1625799
647	29.2	10.2	0.3	chr17	47325325	47325394	(35932047)	+	L2a	LINE/L2	2084	2157	(1262)	1625798
1153	26.2	9.9	2.2	chr17	47325395	47325905	(35931536)	+	L2a	LINE/L2	2783	3334	(92)	1625798
1325	26.1	19.9	13.3	chr17	47608625	47609332	(35648109)	C	L2a	LINE/L2	(1047)	2350	1559	1626380
971	20.8	2.3	0.0	chr17	47657936	47658103	(35599338)	+	FAM	SINE/Alu	1	172	(13)	1626498
2047	13.5	1.2	3.6	chr17	47658146	47658476	(35598965)	C	MER2	DNA/TcMar-Tigger	(22)	323	1	1626499
2257	11.9	8.0	1.2	chr17	47797503	47797841	(35459600)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1626757
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
389	26.8	8.7	5.3	chr17	50947930	50948118	(32309323)	C	MIRc	SINE/MIR	(2)	266	71	1632795
2246	11.1	0.3	0.0	chr17	51991529	51991825	(31265616)	+	AluSp	SINE/Alu	2	299	(14)	1634737
1320	18.3	1.7	4.4	chr17	53040807	53041103	(30216338)	C	L1PB4	LINE/L1	(12)	6144	5856	1636223
410	15.2	9.5	6.2	chr17	53041111	53041222	(30216219)	C	L1PB4	LINE/L1	(264)	5892	5777	1636224
17323	20.5	3.0	2.3	chr17	53253819	53258904	(29998537)	+	L1PA15	LINE/L1	810	6067	(1498)	1636499
1737	17.5	1.4	1.4	chr17	54992133	54992429	(28265012)	+	AluJo	SINE/Alu	1	297	(15)	1638896
1670	18.5	13.6	1.7	chr17	55384665	55385071	(27872370)	C	MER31B	LTR/ERV1	(3)	463	1	1639539
1172	26.2	6.7	1.6	chr17	55385075	55385516	(27871925)	+	L2a	LINE/L2	2936	3401	(25)	1639540
632	26.0	4.5	0.7	chr17	56108997	56109147	(27148294)	+	MIR	SINE/MIR	7	163	(99)	1640764
460	30.9	4.6	0.6	chr17	56109156	56109321	(27148120)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	237	1640765
1255	14.4	1.9	0.9	chr17	56109333	56109543	(27147898)	C	MER20	DNA/hAT-Charlie	(6)	213	1	1640766
492	31.4	3.3	1.0	chr17	56109581	56109786	(27147655)	C	MLT1I	LTR/ERVL-MaLR	(198)	213	3	1640765
318	29.2	8.9	0.0	chr17	57110753	57110865	(26146576)	C	L1ME4a	LINE/L1	(284)	5840	5717	1642665
612	16.3	15.2	0.0	chr17	57860601	57860723	(25396718)	C	MER5A	DNA/hAT-Charlie	(3)	186	42	1643998
248	34.5	10.7	3.7	chr17	57860976	57861219	(25396222)	+	L3	LINE/CR1	3824	4086	(13)	1643999
2428	8.2	0.3	0.0	chr17	58934971	58935263	(24322178)	+	AluSg	SINE/Alu	1	294	(16)	1646076
353	24.7	9.6	14.0	chr17	58935264	58935361	(24322080)	C	L2a	LINE/L2	(166)	3260	3175	1646074
639	24.1	8.7	3.3	chr17	58935330	58935569	(24321872)	C	L2a	LINE/L2	(1198)	2221	1968	1646074
2140	13.4	0.0	0.0	chr17	59788207	59788512	(23468929)	+	AluSg4	SINE/Alu	1	306	(4)	1647944
196	25.0	7.0	2.4	chr17	60149336	60149417	(23108024)	C	MamRTE1	LINE/RTE-BovB	(800)	3012	2927	1648677
26	0.0	0.0	0.0	chr17	60149551	60149575	(23107866)	+	(CCACCC)n	Simple_repeat	1	25	(0)	1648678
2265	11.0	0.0	1.0	chr17	60713828	60714136	(22543305)	C	AluSz	SINE/Alu	(6)	306	1	1649910
737	21.2	0.0	0.0	chr17	60714150	60714267	(22543174)	C	AluJr	SINE/Alu	(194)	118	1	1649911
1887	11.4	4.9	0.0	chr17	60714390	60714662	(22542779)	+	AluSz	SINE/Alu	8	294	(18)	1649912
12	36.7	0.0	0.0	chr17	61235701	61235749	(22021692)	+	A-rich	Low_complexity	1	49	(0)	1650720
527	30.1	15.5	4.0	chr17	62694241	62694721	(20562720)	C	L2a	LINE/L2	(193)	3233	2671	1653532
40	9.7	0.0	0.0	chr17	62694730	62694786	(20562655)	+	(TG)n	Simple_repeat	1	57	(0)	1653533
183	33.9	12.7	0.0	chr17	63600442	63600565	(19656876)	C	MIRc	SINE/MIR	(19)	249	108	1655006
204	19.7	10.7	0.7	chr17	63600570	63600633	(19656808)	+	MIR3	SINE/MIR	91	159	(103)	1655007
5933	11.0	2.4	0.4	chr17	66058875	66060294	(17197147)	+	L1PA16	LINE/L1	4704	6157	(9)	1659642
2679	10.2	0.3	1.1	chr17	69065732	69066108	(14191333)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	1665175
350	34.6	6.9	7.9	chr17	69066109	69066328	(14191113)	+	L2c	LINE/L2	3161	3379	(8)	1665174
2163	29.3	10.8	1.8	chr17	73967011	73967984	(9289457)	+	MamGypsy2-I	LTR/Gypsy	1703	2775	(1391)	1673243
904	29.4	10.6	5.7	chr17	73968003	73968189	(9289252)	C	L2a	LINE/L2	(0)	3426	3215	1673253
809	16.6	7.4	0.7	chr17	73968190	73968340	(9289101)	+	AluJo	SINE/Alu	139	300	(12)	1673254
2688	23.8	6.8	7.5	chr17	74720067	74720302	(8537139)	C	LTR1E	LTR/ERV1	(0)	899	627	1674709
243	39.3	2.4	0.8	chr17	74937694	74937816	(8319625)	C	L2c	LINE/L2	(6)	3381	3257	1675030
11	21.3	8.2	0.0	chr17	74937935	74937983	(8319458)	+	(GGAGGCA)n	Simple_repeat	1	53	(0)	1675031
2212	16.4	6.9	4.9	chr17	78762511	78763004	(4494437)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1682404
2227	11.7	0.0	1.6	chr17	78875041	78875177	(4382264)	C	AluSx1	SINE/Alu	(176)	136	1	1682613
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
659	22.5	4.4	1.7	chr17	81793921	81794546	(1462895)	+	(CA)n	Simple_repeat	1	626	(0)	1686735
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
29	0.0	0.0	0.0	chr17	83080858	83080884	(176557)	+	(GCCCCC)n	Simple_repeat	1	27	(0)	1688556
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2198	8.6	5.8	3.6	chr18	21541319	21541619	(58831666)	+	AluSc8	SINE/Alu	1	308	(3)	1712754
810	17.4	0.8	0.0	chr18	21914658	21914789	(58458496)	C	AluJo	SINE/Alu	(179)	133	1	1713518
305	24.4	7.9	0.0	chr18	21915241	21915322	(58457963)	C	LTR16C	LTR/ERVL	(2)	487	399	1713519
283	28.2	7.5	6.5	chr18	23736491	23736676	(56636609)	C	Tigger16a	DNA/TcMar-Tigger	(16)	941	754	1716790
1161	27.9	7.2	3.0	chr18	24422578	24422836	(55950449)	C	LTR16B2	LTR/ERVL	(178)	284	1	1717920
959	14.7	6.2	0.0	chr18	24422842	24422991	(55950294)	C	MER5A1	DNA/hAT-Charlie	(6)	160	1	1717922
1363	26.2	7.0	6.0	chr18	24646575	24647053	(55726232)	C	LTR33A_	LTR/ERVL	(33)	498	15	1718294
1739	11.4	25.1	0.3	chr18	26119236	26119597	(54253688)	C	LTR19A	LTR/ERV1	(4)	482	1	1720348
9588	22.1	3.1	2.9	chr18	26119598	26122318	(54250967)	+	L1PA11	LINE/L1	58	3290	(4313)	1720347
203	29.4	22.3	1.4	chr18	26384395	26384539	(53988746)	+	MamTip2	DNA/hAT-Tip100	31	214	(91)	1720814
1812	20.1	1.0	0.0	chr18	26514272	26514575	(53858710)	+	AluJr	SINE/Alu	2	308	(4)	1721044
27	30.6	2.6	0.8	chr18	30864336	30864449	(49508836)	+	(TATA)n	Simple_repeat	1	117	(0)	1726877
15	5.6	0.0	0.0	chr18	30864461	30864479	(49508806)	+	(TG)n	Simple_repeat	1	19	(0)	1726878
1459	20.1	10.1	0.3	chr18	31527720	31528048	(48845237)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1727797
14381	20.4	3.5	3.0	chr18	33236612	33241429	(47131856)	+	L1MA5A	LINE/L1	729	5640	(1922)	1730471
3700	18.8	1.6	1.5	chr18	37219974	37220718	(43152567)	C	MER45R	DNA/hAT-Tip100	(406)	1175	430	1735756
24	14.9	0.0	0.0	chr18	37220811	37220855	(43152430)	+	(TTTG)n	Simple_repeat	1	45	(0)	1735761
2201	10.3	0.0	0.0	chr18	37220856	37221126	(43152159)	C	AluSz	SINE/Alu	(41)	271	1	1735762
183	37.0	5.2	2.3	chr18	37494569	37494698	(42878587)	C	MIRc	SINE/MIR	(43)	225	92	1736125
2331	12.7	0.6	2.4	chr18	37938536	37938906	(42434379)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1736720
1496	18.8	5.7	1.9	chr18	38543670	38543940	(41829345)	C	AluJb	SINE/Alu	(29)	283	2	1737524
1239	23.9	0.3	13.9	chr18	38543941	38544239	(41829046)	C	MLT1A	LTR/ERVL-MaLR	(113)	261	2	1737522
203	32.6	9.4	5.6	chr18	38785727	38785757	(41587528)	+	MER5B	DNA/hAT-Charlie	1	31	(147)	1737847
16159	14.6	1.6	1.1	chr18	38785758	38786410	(41586875)	+	Tigger4	DNA/TcMar-Tigger	1	654	(2077)	1737848
184	38.5	10.5	4.9	chr18	39065311	39065534	(41307751)	+	L3	LINE/CR1	3834	4071	(28)	1738205
280	30.7	9.6	3.2	chr18	39065500	39065684	(41307601)	+	MIRb	SINE/MIR	33	230	(38)	1738206
191	25.4	6.8	0.0	chr18	47414098	47414152	(32959133)	+	X7A_LINE	LINE/CR1	138	196	(71)	1750162
495	24.3	3.8	1.9	chr18	47414341	47414495	(32958790)	C	MIR3	SINE/MIR	(6)	202	45	1750163
1524	30.0	13.9	1.7	chr18	47524005	47524461	(32848824)	+	L2a	LINE/L2	2398	2953	(466)	1750350
649	27.7	4.6	3.7	chr18	55443847	55444060	(24929225)	C	MIRb	SINE/MIR	(17)	251	36	1762680
6168	17.1	4.3	4.6	chr18	56578435	56579746	(23793539)	+	L1MCa	LINE/L1	591	1899	(5150)	1764318
254	29.0	14.2	4.8	chr18	56976482	56976691	(23396594)	C	MLT1L	LTR/ERVL-MaLR	(71)	539	307	1764904
434	28.8	9.7	0.0	chr18	56976723	56976861	(23396424)	C	MLT1L	LTR/ERVL-MaLR	(366)	244	91	1764904
2201	11.6	0.3	0.7	chr18	62155286	62155588	(18217697)	+	AluSq	SINE/Alu	1	302	(11)	1773028
758	26.1	8.5	0.4	chr18	63461221	63461459	(16911826)	C	MIR	SINE/MIR	(0)	262	3	1775123
1846	19.9	0.3	0.0	chr18	63461716	63462021	(16911264)	C	AluJb	SINE/Alu	(5)	307	1	1775124
921	26.6	10.5	3.2	chr18	63696610	63696978	(16676307)	C	L1ME2	LINE/L1	(21)	6143	5745	1775481
1546	21.4	3.6	0.3	chr18	64854390	64854712	(15518573)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	14	1776978
2590	12.4	0.0	0.0	chr18	64854716	64855079	(15518206)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1776979
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
200	33.3	2.7	0.0	chr18	79216967	79217038	(1156247)	C	MIR	SINE/MIR	(20)	242	169	1795319
2446	9.0	0.0	0.0	chr18	79217173	79217483	(1155802)	C	AluY	SINE/Alu	(0)	311	1	1795320
3044	20.8	5.0	5.0	chr18	79844663	79845483	(527802)	+	L1MD1	LINE/L1	5403	6223	(19)	1795825
1998	17.0	13.4	0.9	chr18	79956395	79956839	(416446)	+	MER49	LTR/ERV1	415	923	(0)	1795934
284	30.1	9.7	1.0	chr19	472180	472283	(58145333)	C	MIRb	SINE/MIR	(114)	154	41	1796976
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
17	20.4	2.2	0.0	chr19	4007891	4007935	(54609681)	+	(CCGGCCC)n	Simple_repeat	1	46	(0)	1804554
265	32.0	1.8	8.3	chr19	4986635	4986876	(53630740)	C	L2b	LINE/L2	(182)	3193	2968	1807029
2062	9.6	0.0	0.7	chr19	4986946	4987215	(53630401)	C	AluSx1	SINE/Alu	(1)	311	44	1807030
2396	16.7	1.9	3.0	chr19	9472146	9472327	(49145289)	+	MSTB	LTR/ERVL-MaLR	5	180	(246)	1817474
3124	13.3	4.7	8.5	chr19	9472328	9472878	(49144738)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1817475
376	33.0	2.3	4.9	chr19	13117853	13117987	(45499629)	+	MIR	SINE/MIR	126	262	(0)	1825895
491	29.5	9.8	1.2	chr19	13117903	13118070	(45499546)	C	MIRc	SINE/MIR	(30)	238	55	1825908
2777	9.1	3.0	0.3	chr19	14902155	14902508	(43715108)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1830585
13	18.9	4.5	2.2	chr19	15440828	15440871	(43176745)	+	G-rich	Low_complexity	1	46	(0)	1831803
2498	19.0	5.1	3.3	chr19	16334293	16334792	(42282824)	C	L1MB3	LINE/L1	(45)	6138	5618	1833743
259	26.3	2.1	1.0	chr19	17952862	17952969	(40664647)	C	MIRb	SINE/MIR	(125)	143	38	1837702
18	16.8	5.3	0.0	chr19	19642695	19642738	(38974878)	+	GA-rich	Low_complexity	1	46	(0)	1841357
4328	17.2	1.5	2.6	chr19	20211828	20212809	(38404807)	+	L1PREC2	LINE/L1	4799	5784	(376)	1842280
9621	11.9	3.1	0.8	chr19	21228631	21229657	(37387959)	+	L1PA10	LINE/L1	922	1977	(4376)	1843698
351	27.2	8.0	2.8	chr19	27959790	27960001	(30657615)	C	HAL1	LINE/L1	(917)	1590	1367	1848102
271	23.9	4.6	8.2	chr19	27960021	27960202	(30657414)	C	HAL1	LINE/L1	(1214)	1293	1119	1848102
393	29.4	2.1	1.4	chr19	27960396	27960533	(30657083)	C	HAL1	LINE/L1	(1776)	731	593	1848102
2477	7.3	0.3	0.0	chr19	28443860	28444160	(30173456)	+	AluSp	SINE/Alu	1	302	(11)	1848771
309	33.3	4.4	0.0	chr19	35587602	35587730	(23029886)	+	MIRb	SINE/MIR	23	157	(111)	1860702
1958	14.8	0.0	2.0	chr19	35833697	35834001	(22783615)	C	AluJb	SINE/Alu	(13)	299	1	1861271
397	27.8	10.8	2.3	chr19	35834002	35834054	(22783562)	+	MLT1K	LTR/ERVL-MaLR	522	574	(21)	1861270
426	23.1	3.7	1.9	chr19	35834101	35834206	(22783410)	+	MLT1H2	LTR/ERVL-MaLR	39	146	(343)	1861272
294	19.2	10.3	0.0	chr19	35834422	35834499	(22783117)	+	MLT1H2	LTR/ERVL-MaLR	463	549	(0)	1861272
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
293	27.6	2.6	8.3	chr19	38496623	38496815	(20120801)	C	L2b	LINE/L2	(2)	3424	3130	1866799
280	21.5	0.0	13.2	chr19	38637291	38637323	(19980293)	+	MIRc	SINE/MIR	81	108	(160)	1867151
333	30.9	8.7	0.7	chr19	39188741	39188877	(19428739)	+	L2a	LINE/L2	2282	2430	(989)	1868485
1238	28.7	7.5	1.9	chr19	39188932	39189400	(19428216)	+	L2a	LINE/L2	2925	3421	(5)	1868485
1450	13.9	0.5	0.5	chr19	39189463	39189671	(19427945)	+	AluJr4	SINE/Alu	84	292	(20)	1868486
21009	11.4	3.7	1.9	chr19	39618494	39624631	(18992985)	C	L1PA7	LINE/L1	(2)	6467	97	1869411
692	17.4	13.4	6.4	chr19	42235141	42235254	(16382362)	C	MER5A	DNA/hAT-Charlie	(56)	133	1	1874860
297	23.9	4.3	6.4	chr19	42235420	42235513	(16382103)	+	L2a	LINE/L2	3282	3373	(53)	1874862
411	30.7	4.7	7.8	chr19	42235609	42235827	(16381789)	+	L2c	LINE/L2	3137	3348	(39)	1874863
2079	11.8	0.3	3.5	chr19	42427683	42427995	(16189621)	C	AluSz6	SINE/Alu	(9)	303	1	1875261
801	23.9	3.6	0.0	chr19	44034644	44034831	(14582785)	C	HERV35I-int	LTR/ERV1	(6723)	195	1	1878087
3100	12.6	8.3	0.0	chr19	44034833	44035331	(14582285)	C	LTR35A	LTR/ERV1	(0)	547	4	1878087
386	24.1	4.4	1.5	chr19	44035341	44035497	(14582119)	+	ERVL-B4-int	LTR/ERVL	1665	1831	(3823)	1878090
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
1541	14.5	11.6	3.3	chr19	45358044	45358319	(13259297)	C	AluSx1	SINE/Alu	(10)	302	1	1881088
293	26.4	8.3	1.6	chr19	45358320	45358442	(13259174)	+	L2a	LINE/L2	2585	2716	(703)	1881089
556	31.6	14.5	3.4	chr19	45358506	45358945	(13258671)	+	L2a	LINE/L2	2918	3426	(0)	1881089
977	21.4	2.9	4.0	chr19	45358989	45359266	(13258350)	C	L2b	LINE/L2	(58)	3317	3043	1881090
884	23.2	7.6	2.8	chr19	45547265	45547477	(13070139)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	1881605
221	30.1	13.4	5.7	chr19	45547478	45547697	(13069919)	+	L2b	LINE/L2	2978	3220	(155)	1881604
2370	8.7	0.3	0.0	chr19	45547698	45547996	(13069620)	C	AluSp	SINE/Alu	(13)	300	1	1881606
548	23.9	15.8	4.0	chr19	46951469	46951695	(11665921)	+	MIR	SINE/MIR	4	262	(0)	1884956
185	36.1	0.0	0.0	chr19	46951865	46951925	(11665691)	+	MIR	SINE/MIR	6	66	(196)	1884957
1534	11.8	4.8	0.4	chr19	46951928	46952207	(11665409)	+	L1MA4	LINE/L1	5997	6289	(11)	1884958
432	28.3	7.0	1.6	chr19	47191000	47191121	(11426495)	+	MIR	SINE/MIR	16	144	(118)	1885498
26	16.0	0.0	0.0	chr19	47701525	47701573	(10916043)	+	(TCC)n	Simple_repeat	1	49	(0)	1886816
12	19.9	0.0	0.0	chr19	49103626	49103654	(9513962)	+	G-rich	Low_complexity	1	29	(0)	1890386
2436	8.6	0.0	0.0	chr19	49209744	49210047	(9407569)	C	AluSx1	SINE/Alu	(7)	305	2	1890610
1694	17.0	0.0	0.7	chr19	50368231	50368507	(8249109)	+	AluJo	SINE/Alu	24	298	(14)	1893355
3577	7.9	3.3	0.2	chr19	51804696	51805164	(6812452)	C	LTR3A	LTR/ERVK	(0)	484	1	1896286
15477	10.8	2.6	0.3	chr19	51976454	51978688	(6638928)	+	HERVK3-int	LTR/ERVK	1	2288	(4914)	1896586
1132	26.5	6.3	8.3	chr19	54668341	54669123	(3948493)	+	L1M5	LINE/L1	3160	3925	(2221)	1902130
4411	20.8	5.2	8.1	chr19	54669104	54670017	(3947599)	C	L1M2	LINE/L1	(2370)	5415	4559	1902131
2375	34.9	5.6	4.7	chr2	2673701	2675840	(239517689)	C	PRIMA4-int	LTR/ERV1	(2029)	6241	4080	1913545
208	28.1	3.4	0.0	chr2	3391556	3391612	(238801917)	C	L2a	LINE/L2	(4)	3422	3364	1914411
308	21.6	11.9	0.0	chr2	3391613	3391686	(238801843)	C	Tigger15a	DNA/TcMar-Tigger	(150)	565	482	1914412
9823	13.0	4.3	0.6	chr2	7800527	7802033	(234391496)	+	THE1D-int	LTR/ERVL-MaLR	15	1580	(0)	1920449
15842	11.9	2.6	0.5	chr2	8272980	8275339	(233918190)	C	Tigger1	DNA/TcMar-Tigger	(6)	2412	1	1921126
2038	16.5	0.0	0.0	chr2	9343438	9343746	(232849783)	C	AluJo	SINE/Alu	(3)	309	1	1922793
192	30.0	0.0	3.2	chr2	9343752	9343813	(232849716)	C	L2b	LINE/L2	(6)	3369	3310	1922794
6013	24.8	10.5	2.6	chr2	12462543	12463161	(229730368)	+	L1M4	LINE/L1	2149	2906	(3738)	1928364
1675	15.8	3.4	11.8	chr2	12463162	12463578	(229729951)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1928366
1979	12.3	2.4	0.3	chr2	13581490	13581774	(228611755)	+	AluSq2	SINE/Alu	6	296	(17)	1930015
377	27.4	1.0	0.0	chr2	16369012	16369106	(225824423)	C	MER94	DNA/hAT-Blackjack	(38)	96	1	1934405
196	36.1	0.0	7.8	chr2	16609325	16609453	(225584076)	+	MIR3	SINE/MIR	16	134	(134)	1934776
298	36.3	16.3	0.0	chr2	16609428	16609664	(225583865)	+	L2a	LINE/L2	2969	3251	(175)	1934777
690	27.9	13.7	5.4	chr2	17433060	17433578	(224759951)	+	L1ME4a	LINE/L1	5374	5942	(182)	1935966
1255	31.3	9.4	4.6	chr2	19779096	19780102	(222413427)	C	L2b	LINE/L2	(0)	3375	2318	1939289
233	27.1	7.6	3.4	chr2	23093654	23093741	(219099788)	+	MER130	DNA	406	497	(1097)	1943942
1723	16.1	1.3	1.3	chr2	25803548	25803855	(216389674)	C	MER1B	DNA/hAT-Charlie	(0)	339	32	1948591
534	11.6	0.9	14.5	chr2	25803859	25803989	(216389540)	+	MER21C	LTR/ERVL	818	930	(8)	1948588
1889	15.3	1.6	1.0	chr2	27861948	27862248	(214331281)	C	AluJb	SINE/Alu	(8)	304	2	1952639
831	23.9	3.4	9.8	chr2	28514980	28515146	(213678383)	+	MIR	SINE/MIR	89	262	(0)	1953701
181	33.3	4.5	0.0	chr2	28594247	28594309	(213599220)	C	L2c	LINE/L2	(261)	3126	3061	1953831
1103	23.9	5.0	6.1	chr2	29143199	29143607	(213049922)	+	L2a	LINE/L2	3023	3426	(0)	1954851
16	0.0	0.0	0.0	chr2	30038270	30038286	(212155243)	+	(A)n	Simple_repeat	1	17	(0)	1956254
285	26.8	5.3	3.8	chr2	30038291	30038438	(212155091)	+	MIRb	SINE/MIR	14	164	(104)	1956255
817	25.2	12.4	1.7	chr2	32718388	32718791	(209474738)	C	HAL1ME	LINE/L1	(1308)	1157	705	1960849
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2091	14.3	0.0	0.7	chr2	33392184	33392484	(208801045)	C	AluSg	SINE/Alu	(11)	299	1	1961885
806	23.0	5.7	6.1	chr2	33392485	33392661	(208800868)	C	MER58A	DNA/hAT-Charlie	(40)	184	5	1961884
2399	12.1	0.0	0.0	chr2	33725606	33725910	(208467619)	C	AluSx1	SINE/Alu	(7)	305	1	1962441
20	0.0	0.0	0.0	chr2	33725916	33725937	(208467592)	+	(T)n	Simple_repeat	1	22	(0)	1962442
17	10.8	0.0	0.0	chr2	33726063	33726092	(208467437)	+	(TTAT)n	Simple_repeat	1	30	(0)	1962443
2433	9.3	0.0	0.0	chr2	33792229	33792530	(208400999)	+	AluY	SINE/Alu	3	304	(7)	1962542
1962	11.2	7.7	0.0	chr2	33811770	33812056	(208381473)	+	AluSc8	SINE/Alu	1	311	(0)	1962579
2301	12.3	1.8	1.6	chr2	34546233	34546612	(207646917)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1963701
6415	24.1	5.4	2.0	chr2	34546613	34548457	(207645072)	C	L1M2	LINE/L1	(5045)	2521	718	1963699
383	22.1	3.2	6.9	chr2	35035324	35035351	(207158178)	+	ERVL-E-int	LTR/ERVL	1549	1579	(4088)	1964331
1954	14.8	2.9	4.2	chr2	35035352	35035731	(207157798)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1964332
383	22.1	3.2	6.9	chr2	35035732	35035833	(207157696)	+	ERVL-E-int	LTR/ERVL	1580	1674	(3993)	1964331
237	29.8	11.4	2.4	chr2	37262307	37262433	(204931096)	+	L2c	LINE/L2	3243	3382	(5)	1967418
356	28.0	15.7	3.5	chr2	37262773	37263402	(204930127)	C	L1M5	LINE/L1	(2688)	3458	2738	1967419
838	14.1	0.8	0.0	chr2	38505485	38505605	(203687924)	C	AluJr	SINE/Alu	(189)	123	2	1969366
265	26.9	1.0	3.7	chr2	38505607	38505635	(203687894)	C	L1M5	LINE/L1	(883)	5263	5235	1969365
1765	26.6	2.1	0.8	chr2	38505636	38506109	(203687420)	C	LTR16B1	LTR/ERVL	(0)	480	1	1969367
299	21.7	6.3	13.3	chr2	39479852	39480048	(202713481)	+	MIRc	SINE/MIR	32	215	(15)	1971284
2738	12.7	1.9	2.1	chr2	39743447	39743879	(202449650)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1971686
1168	33.9	4.2	4.3	chr2	39838893	39839777	(202353752)	C	L1P4b	LINE/L1	(6118)	1216	333	1971800
33	3.1	0.0	0.0	chr2	39839778	39839810	(202353719)	+	(GT)n	Simple_repeat	1	33	(0)	1971801
1979	15.7	2.6	0.0	chr2	41277680	41278017	(200915512)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	2	1973744
203	32.4	2.9	5.6	chr2	44047820	44047879	(198145650)	C	MIR3	SINE/MIR	(22)	186	124	1978462
894	20.8	9.4	3.0	chr2	44178793	44178972	(198014557)	C	MER33	DNA/hAT-Charlie	(1)	323	122	1978746
1979	15.4	4.7	2.5	chr2	44178973	44179326	(198014203)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1978747
894	20.8	9.4	3.0	chr2	44179327	44179443	(198014086)	C	MER33	DNA/hAT-Charlie	(203)	121	5	1978746
2168	13.3	0.0	0.0	chr2	44511296	44511588	(197681941)	C	AluSx	SINE/Alu	(19)	293	1	1979330
2411	8.5	0.3	6.6	chr2	44511589	44511625	(197681904)	C	L1PB2	LINE/L1	(322)	5829	5793	1979328
477	26.7	4.2	5.3	chr2	44511719	44511908	(197681621)	+	L2a	LINE/L2	3029	3216	(210)	1979331
2190	29.3	15.3	2.8	chr2	44667324	44668609	(197524920)	+	L2	LINE/L2	465	1940	(1479)	1979576
1084	29.5	11.6	4.0	chr2	45472749	45474306	(196719223)	C	L1MEi	LINE/L1	(3662)	2484	889	1980759
459	15.1	3.0	0.4	chr2	46591722	46591815	(195601714)	+	MIR	SINE/MIR	85	184	(46)	1982500
715	20.7	0.0	2.2	chr2	46592071	46592205	(195601324)	+	FLAM_A	SINE/Alu	1	132	(10)	1982501
1198	18.1	8.9	7.6	chr2	47296908	47297059	(194896470)	+	AluJo	SINE/Alu	130	297	(15)	1983745
651	14.2	9.4	0.0	chr2	47297112	47297217	(194896312)	+	MER39	LTR/ERV1	1	117	(590)	1983747
889	13.2	2.0	1.4	chr2	47297218	47297363	(194896166)	+	MER65D	LTR/ERV1	1	147	(326)	1983748
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
2191	27.1	6.0	5.5	chr2	48260627	48261689	(193931840)	C	HAL1	LINE/L1	(8)	2499	1432	1985662
236	31.7	3.5	0.0	chr2	48419628	48419709	(193773820)	+	MamTip2	DNA/hAT-Tip100	2	86	(219)	1985932
300	25.3	5.2	10.5	chr2	48726211	48726485	(193467044)	+	MIRc	SINE/MIR	3	262	(6)	1986454
612	23.8	2.6	6.4	chr2	49526887	49527043	(192666486)	+	MER58A	DNA/hAT-Charlie	25	175	(49)	1987551
231	24.2	2.9	8.3	chr2	49527055	49527098	(192666431)	+	MER58B	DNA/hAT-Charlie	268	313	(28)	1987552
2241	13.7	0.8	0.8	chr2	49527099	49527452	(192666077)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	1987553
1738	16.9	5.2	3.6	chr2	50590528	50590884	(191602645)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	1988965
9635	13.6	4.1	0.7	chr2	52470050	52471572	(189721957)	+	THE1-int	LTR/ERVL-MaLR	3	1580	(0)	1991338
1789	15.9	7.1	1.7	chr2	52471576	52471933	(189721596)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	1991339
309	26.1	4.7	12.9	chr2	52471934	52472056	(189721473)	C	L1MC4	LINE/L1	(33)	8009	7892	1991336
22	29.9	1.4	0.0	chr2	52472060	52472128	(189721401)	+	(TA)n	Simple_repeat	1	70	(0)	1991340
1796	26.2	5.4	5.1	chr2	53409209	53409758	(188783771)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	1992546
4876	14.9	9.0	1.6	chr2	53415035	53416033	(188777496)	C	L1MA9	LINE/L1	(0)	6312	5236	1992550
1908	17.2	4.4	2.1	chr2	53416189	53416567	(188776962)	+	MLT1B	LTR/ERVL-MaLR	2	389	(1)	1992551
2394	8.1	0.7	0.0	chr2	55267971	55268266	(186925263)	+	AluSx1	SINE/Alu	1	298	(14)	1995598
1795	19.9	10.3	3.1	chr2	55437284	55437739	(186755790)	+	MLT1D	LTR/ERVL-MaLR	12	504	(1)	1995906
309	13.1	6.2	0.0	chr2	55437740	55437800	(186755729)	+	MER52A	LTR/ERV1	1	65	(1690)	1995907
630	23.9	0.6	0.6	chr2	55437810	55437940	(186755589)	+	MER52D	LTR/ERV1	602	732	(1391)	1995908
4258	20.4	6.9	0.7	chr2	55437941	55438940	(186754589)	+	MER52D	LTR/ERV1	1	1538	(585)	1995908
272	17.5	2.0	0.6	chr2	56175461	56175519	(186018010)	+	MIRc	SINE/MIR	117	177	(91)	1997089
14	17.6	0.0	6.8	chr2	56374382	56374425	(185819104)	+	(AAT)n	Simple_repeat	1	44	(0)	1997329
3889	24.7	10.6	0.5	chr2	59377475	59378632	(182814897)	+	L1MA4A	LINE/L1	1	1289	(5920)	2001054
684	25.5	12.3	2.0	chr2	59855116	59855407	(182338122)	C	L2	LINE/L2	(1047)	2372	2047	2001667
197	33.0	5.4	2.2	chr2	59855412	59855501	(182338028)	C	MamTip2	DNA/hAT-Tip100	(48)	257	165	2001668
2260	10.3	0.3	1.0	chr2	61892412	61892721	(180300808)	+	AluSc8	SINE/Alu	1	308	(3)	2005415
2211	12.7	0.3	0.0	chr2	61892867	61893166	(180300363)	C	AluSx	SINE/Alu	(11)	301	1	2005416
681	32.7	12.1	2.5	chr2	63774398	63774962	(178418567)	+	L2c	LINE/L2	2240	2866	(553)	2008307
690	27.6	1.4	5.3	chr2	66498197	66498422	(175695107)	C	MIR	SINE/MIR	(1)	261	45	2012843
2466	14.4	1.7	1.2	chr2	68108025	68108433	(174085096)	+	LTR57	LTR/ERVL	1	411	(0)	2015055
1493	20.6	7.9	5.5	chr2	68108434	68108491	(174085038)	C	MLT1D	LTR/ERVL-MaLR	(449)	56	1	2015052
519	31.2	8.2	6.0	chr2	68108499	68108996	(174084533)	+	MLT1J	LTR/ERVL-MaLR	1	510	(2)	2015056
320	34.0	15.2	4.6	chr2	74254180	74254549	(167938980)	+	L2b	LINE/L2	2960	3375	(0)	2025089
2603	11.6	0.3	0.0	chr2	75170099	75170461	(167023068)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2026591
10697	8.7	4.6	2.9	chr2	75170462	75172014	(167021515)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2026591
1986	20.5	8.1	1.5	chr2	80684512	80684981	(161508548)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	1	2034107
249	35.3	8.0	3.2	chr2	80684982	80685019	(161508510)	C	MIR	SINE/MIR	(214)	48	2	2034106
529	34.3	3.2	1.2	chr2	81364633	81364880	(160828649)	C	LTR33	LTR/ERVL	(2)	513	261	2034929
3142	18.6	5.5	0.0	chr2	83661149	83661738	(158531791)	C	Tigger1	DNA/TcMar-Tigger	(14)	2404	1781	2037952
598	25.0	5.7	2.4	chr2	84635009	84635213	(157558316)	C	MamRep38	DNA/hAT	(80)	215	4	2039247
1835	18.7	0.3	0.0	chr2	84980642	84980940	(157212589)	C	AluJo	SINE/Alu	(12)	300	1	2039834
346	29.3	11.7	1.1	chr2	84980949	84981124	(157212405)	+	MamSINE1	SINE/tRNA-RTE	92	288	(2)	2039835
324	28.6	3.3	7.0	chr2	86148855	86149012	(156044517)	C	L2a	LINE/L2	(0)	3426	3275	2042131
258	30.1	19.8	1.8	chr2	86149260	86149482	(156044047)	C	L2a	LINE/L2	(341)	3078	2806	2042131
342	24.5	2.8	6.2	chr2	89767457	89767569	(152425960)	+	MLT1D	LTR/ERVL-MaLR	5	113	(392)	2047575
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
16893	6.0	1.5	1.1	chr2	99497182	99499719	(142693810)	+	HERVIP10F-int	LTR/ERV1	2	2414	(5323)	2056553
1445	6.6	15.5	1.4	chr2	99499709	99500000	(142693529)	+	HERVIP10FH-int	LTR/ERV1	741	1081	(4021)	2056554
4325	13.3	4.8	0.9	chr2	102251914	102252670	(139940859)	C	L1PB4	LINE/L1	(0)	6156	5369	2060837
13	24.3	5.7	0.0	chr2	102691528	102691580	(139501949)	+	GA-rich	Low_complexity	1	56	(0)	2061405
571	26.9	6.9	3.3	chr2	104272172	104272352	(137921177)	+	MIRb	SINE/MIR	65	252	(16)	2063299
772	28.1	3.3	1.5	chr2	108627891	108628161	(133565368)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	192	2069550
877	18.3	1.4	0.0	chr2	111886404	111886545	(130306984)	C	AluJo	SINE/Alu	(22)	290	147	2074188
1544	16.7	3.8	0.0	chr2	111886551	111886832	(130306697)	C	L1MC3	LINE/L1	(362)	7423	7131	2074187
1907	17.8	5.2	2.8	chr2	111886879	111887012	(130306517)	+	L1M4	LINE/L1	4888	5028	(1118)	2074189
798	25.4	9.6	2.9	chr2	114008072	114008622	(128184907)	C	L2a	LINE/L2	(162)	3264	2667	2077763
392	31.6	6.3	7.5	chr2	114054156	114054539	(128138990)	+	LTR78	LTR/ERV1	913	1291	(13)	2077823
12955	9.1	1.9	0.6	chr2	116717783	116719544	(125473985)	+	HERVL66-int	LTR/ERVL	1	1786	(2543)	2081385
1373	24.8	9.5	1.9	chr2	116969824	116970310	(125223219)	C	LTR26	LTR/ERV1	(0)	603	201	2081730
326	30.9	21.7	0.5	chr2	117605579	117605770	(124587759)	+	MIRb	SINE/MIR	16	259	(9)	2082501
55	0.0	0.0	0.0	chr2	119523393	119523441	(122670088)	+	(TAT)n	Simple_repeat	1	49	(0)	2085506
262	30.7	2.9	1.8	chr2	119523714	119523832	(122669697)	+	MIRb	SINE/MIR	108	233	(35)	2085507
251	31.7	8.5	6.9	chr2	119523840	119524012	(122669517)	+	MamRep1879	DNA/hAT-Tip100?	5	180	(36)	2085508
316	22.3	12.8	3.7	chr2	121270242	121270376	(120923153)	C	L2a	LINE/L2	(36)	3390	3242	2088394
374	28.1	9.9	7.2	chr2	121270386	121270719	(120922810)	+	L1ME3G	LINE/L1	289	632	(292)	2088395
361	30.0	14.1	2.6	chr2	122187986	122188440	(120005089)	C	L2b	LINE/L2	(360)	3059	2544	2090026
1038	31.1	8.4	1.1	chr2	122188492	122188963	(120004566)	C	LTR78	LTR/ERV1	(0)	1304	795	2090027
12635	10.6	1.8	1.8	chr2	123393620	123396034	(118797495)	+	L1P3	LINE/L1	1961	4357	(2104)	2091694
3414	26.3	5.5	2.2	chr2	123714296	123715643	(118477886)	+	L1MEc	LINE/L1	2765	4159	(2160)	2092122
2099	11.9	0.0	0.0	chr2	123715942	123716227	(118477302)	C	AluSq2	SINE/Alu	(6)	307	22	2092123
282	28.6	5.6	4.8	chr2	129308724	129308848	(112884681)	C	L2c	LINE/L2	(8)	3379	3254	2100306
114	44.1	0.7	1.9	chr2	129309048	129309980	(112883549)	+	(GTG)n	Simple_repeat	1	921	(0)	2100307
2878	24.2	13.3	3.9	chr2	129340433	129341891	(112851638)	+	L1M4a2	LINE/L1	930	2775	(741)	2100346
282	30.3	5.1	7.7	chr2	129606284	129606568	(112586961)	+	L2c	LINE/L2	3011	3296	(79)	2100622
238	23.1	0.0	0.0	chr2	131492673	131492724	(110700805)	+	L2b	LINE/L2	3312	3363	(12)	2103372
1977	21.3	6.9	0.4	chr2	131526451	131526950	(110666579)	C	L1MCb	LINE/L1	(4864)	1181	647	2103419
393	33.6	0.0	0.7	chr2	131526938	131527081	(110666448)	C	L1MCa	LINE/L1	(5906)	602	460	2103424
1472	18.0	0.7	7.0	chr2	131527102	131527428	(110666101)	C	AluSz6	SINE/Alu	(4)	308	3	2103425
314	18.5	1.8	0.0	chr2	131527430	131527483	(110666046)	C	FRAM	SINE/Alu	(8)	168	114	2103426
195	30.3	1.5	5.7	chr2	133050157	133050226	(109143303)	+	L2c	LINE/L2	3283	3349	(38)	2105423
1948	17.0	0.0	0.7	chr2	134110226	134110531	(108082998)	C	AluJr	SINE/Alu	(8)	304	1	2106942
3661	24.7	11.5	6.1	chr2	134110532	134110864	(108082665)	+	MLT1D-int	LTR/ERVL-MaLR	578	983	(506)	2106940
208	21.1	0.0	0.0	chr2	134145558	134145595	(108047934)	C	L3	LINE/CR1	(1503)	2596	2559	2107003
614	28.3	8.4	1.9	chr2	134145616	134145841	(108047688)	+	MIRb	SINE/MIR	6	240	(22)	2107006
20	11.6	0.0	0.0	chr2	136219191	136219219	(105974310)	+	(A)n	Simple_repeat	1	29	(0)	2110346
242	30.5	0.0	0.0	chr2	136219269	136219350	(105974179)	C	MIRc	SINE/MIR	(16)	252	171	2110347
2490	22.2	4.2	1.4	chr2	138058749	138059442	(104134087)	C	L1MC4a	LINE/L1	(0)	7882	7169	2112924
425	26.5	4.9	0.1	chr2	138745548	138745744	(103447785)	+	L1ME3Cz	LINE/L1	456	639	(358)	2113902
275	26.7	1.0	12.2	chr2	138745762	138745876	(103447653)	+	L1ME3Cz	LINE/L1	762	863	(134)	2113902
291	28.8	10.3	7.3	chr2	139054926	139055075	(103138454)	+	L2a	LINE/L2	3261	3415	(11)	2114318
281	27.8	6.7	2.0	chr2	141856319	141856417	(100337112)	C	Plat_L3	LINE/CR1	(18)	3568	3465	2118032
308	34.2	3.4	4.4	chr2	141856399	141856603	(100336926)	C	Plat_L3	LINE/CR1	(241)	3345	3143	2118032
243	31.7	6.8	9.9	chr2	142965519	142965700	(99227829)	C	MLT1J2	LTR/ERVL-MaLR	(210)	400	225	2119478
2451	7.8	0.0	0.3	chr2	148363238	148363532	(93829997)	C	AluY	SINE/Alu	(17)	294	1	2126543
22643	9.8	0.8	2.1	chr2	148363533	148368483	(93825046)	+	L1PA7	LINE/L1	1559	6469	(0)	2126542
180	21.2	0.0	0.0	chr2	149229624	149229656	(92963873)	+	L2	LINE/L2	3048	3080	(339)	2127793
2250	14.0	1.1	0.8	chr2	150461013	150461386	(91732143)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2129398
1796	24.6	5.1	8.7	chr2	151384188	151384689	(90808840)	C	L2	LINE/L2	(1814)	1605	1126	2130789
2100	14.3	0.0	0.3	chr2	151384690	151384983	(90808546)	C	AluSz	SINE/Alu	(19)	293	1	2130794
295	35.5	3.6	2.5	chr2	152549804	152549965	(89643564)	+	MIR3	SINE/MIR	40	203	(5)	2132602
11290	19.6	4.0	2.4	chr2	153282716	153284880	(88908649)	C	L1PA16	LINE/L1	(5063)	1790	2	2133545
13	14.7	3.3	0.0	chr2	157628876	157628905	(84564624)	+	G-rich	Low_complexity	1	31	(0)	2138967
351	32.6	5.9	2.0	chr2	158728968	158729114	(83464415)	C	MIR3	SINE/MIR	(32)	176	24	2140468
204	27.8	0.0	2.7	chr2	160223107	160223180	(81970349)	C	L2a	LINE/L2	(222)	3204	3133	2142782
283	28.9	13.1	0.6	chr2	160223256	160223429	(81970100)	C	L2a	LINE/L2	(404)	3015	2817	2142782
311	31.6	10.1	0.7	chr2	160223476	160223628	(81969901)	C	MIR	SINE/MIR	(82)	180	12	2142778
365	29.2	6.4	3.9	chr2	160310591	160310743	(81882786)	+	LTR78	LTR/ERV1	1147	1303	(1)	2142897
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
196	29.8	0.0	3.4	chr2	162993683	162993741	(79199788)	+	L2a	LINE/L2	3313	3369	(18)	2146374
2657	8.5	0.3	0.6	chr2	167036730	167037085	(75156444)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2151729
4104	11.1	1.1	1.7	chr2	167037086	167037332	(75156197)	+	L1M1	LINE/L1	3936	4180	(3385)	2151728
836	24.7	5.6	0.0	chr2	168345363	168345597	(73847932)	+	hAT-N1_Mam	DNA/hAT-Tip100?	13	261	(79)	2153428
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
2312	11.5	0.0	0.0	chr2	170177337	170177641	(72015888)	C	AluSx	SINE/Alu	(6)	306	2	2156259
685	29.1	5.5	3.0	chr2	170712663	170712892	(71480637)	C	MIR	SINE/MIR	(20)	242	7	2157101
806	19.7	7.2	0.7	chr2	173935099	173935240	(68258289)	+	FRAM	SINE/Alu	1	152	(24)	2162402
1796	16.1	0.7	2.5	chr2	174423778	174424089	(67769440)	C	AluJr4	SINE/Alu	(0)	312	2	2163232
578	28.0	9.2	4.8	chr2	175230377	175230624	(66962905)	+	MLT1J1	LTR/ERVL-MaLR	69	328	(116)	2164517
325	32.7	4.5	3.2	chr2	175368401	175368555	(66824974)	+	MIR3	SINE/MIR	29	185	(23)	2164699
2176	12.4	4.1	2.8	chr2	175840817	175841173	(66352356)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	2165304
12	21.1	5.1	0.0	chr2	176685226	176685264	(65508265)	+	GA-rich	Low_complexity	1	41	(0)	2166500
351	32.0	9.4	4.7	chr2	176685436	176685779	(65507750)	C	UCON8	DNA	(291)	824	463	2166501
1153	29.5	8.2	3.0	chr2	177024794	177025268	(65168261)	+	LTR33	LTR/ERVL	14	515	(0)	2166970
309	35.1	12.5	3.8	chr2	178388423	178388845	(63804684)	+	L2c	LINE/L2	2922	3386	(1)	2169011
495	33.6	7.8	0.7	chr2	183608278	183608562	(58584967)	C	Charlie13b	DNA/hAT-Charlie	(184)	328	22	2175595
2782	16.7	0.8	0.6	chr2	184835119	184835595	(57357934)	C	MER66A	LTR/ERV1	(0)	478	1	2177045
2540	9.3	2.4	0.3	chr2	186214936	186215302	(55978227)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2178761
5486	21.9	9.2	1.0	chr2	187934766	187935924	(54257605)	C	LTR2752	LTR/ERV1	(0)	1263	1	2181019
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
11	24.0	4.5	0.0	chr2	190344130	190344173	(51849356)	+	(GGCCCC)n	Simple_repeat	1	46	(0)	2184208
653	28.6	9.6	2.2	chr2	190643435	190643666	(51549863)	+	MIR	SINE/MIR	12	262	(0)	2184664
2902	11.3	19.1	2.3	chr2	192117522	192118046	(50075483)	+	MER51A	LTR/ERV1	1	634	(0)	2186845
11009	10.8	0.7	0.2	chr2	193007574	193009145	(49184384)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2187933
2625	10.1	0.0	0.3	chr2	193009146	193009501	(49184028)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2187933
290	33.5	9.0	3.6	chr2	195090362	195090581	(47102948)	C	L2c	LINE/L2	(4)	3383	3151	2190446
976	14.5	5.9	2.5	chr2	195090599	195090761	(47102768)	C	THE1B	LTR/ERVL-MaLR	(0)	364	196	2190447
1640	32.1	6.8	3.1	chr2	195156224	195157320	(47036209)	+	L1ME3A	LINE/L1	222	1361	(4881)	2190536
399	34.7	10.5	4.3	chr2	196029892	196030050	(46163479)	+	HAL1ME	LINE/L1	2	183	(2282)	2191797
1926	15.6	4.7	4.7	chr2	196030051	196030414	(46163115)	C	THE1A	LTR/ERVL-MaLR	(0)	364	1	2191798
11969	8.4	0.9	0.0	chr2	196030415	196031980	(46161549)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2191798
662	30.4	11.3	2.4	chr2	197998858	197999234	(44194295)	C	LTR33	LTR/ERVL	(82)	433	19	2194904
216	28.6	17.0	0.9	chr2	197999249	197999361	(44194168)	+	MIRb	SINE/MIR	126	260	(8)	2194905
587	30.9	11.8	1.7	chr2	198791889	198792244	(43401285)	+	MLT1I	LTR/ERVL-MaLR	6	402	(9)	2196007
2263	17.3	3.5	1.1	chr2	198792508	198792957	(43400572)	+	L1MC1	LINE/L1	5867	6327	(6)	2196008
366	26.1	0.9	1.7	chr2	200190012	200190129	(42003400)	+	MLT1H2	LTR/ERVL-MaLR	67	179	(310)	2197954
15	20.5	0.0	0.0	chr2	200812354	200812387	(41381142)	+	(CCG)n	Simple_repeat	1	34	(0)	2198904
14590	7.5	0.7	0.6	chr2	204461265	204464089	(37729440)	C	L1PA7	LINE/L1	(1833)	4313	1501	2205654
393	28.0	6.3	3.8	chr2	204497071	204497318	(37696211)	+	MER91B	DNA/hAT-Tip100	1	196	(3328)	2205699
975	16.4	0.6	11.2	chr2	207839567	207839651	(34353878)	+	MER5A	DNA/hAT-Charlie	3	74	(115)	2210804
1834	17.3	2.9	0.7	chr2	207839652	207839951	(34353578)	+	AluJb	SINE/Alu	1	307	(5)	2210805
250	36.0	2.3	4.4	chr2	207961011	207961151	(34232378)	C	MIR1_Amn	SINE/MIR	(52)	156	23	2211035
680	13.9	0.0	13.9	chr2	208284851	208284987	(33908542)	C	AluJr	SINE/Alu	(194)	118	1	2211640
1968	16.4	1.2	2.1	chr2	208885532	208885868	(33307661)	+	THE1B	LTR/ERVL-MaLR	31	364	(0)	2212370
2059	14.7	4.0	1.9	chr2	213712881	213713247	(28480282)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2218591
430	33.0	2.8	5.0	chr2	214077586	214077767	(28115762)	+	LTR16D	LTR/ERVL	127	304	(347)	2219100
579	25.1	7.7	0.6	chr2	214077871	214078041	(28115488)	+	LTR16D	LTR/ERVL	369	643	(8)	2219100
685	30.1	1.5	1.0	chr2	214865634	214865831	(27327698)	+	LTR16A	LTR/ERVL	30	228	(223)	2220223
2471	21.4	4.1	3.6	chr2	214865838	214866448	(27327081)	+	MLT1E3	LTR/ERVL-MaLR	7	620	(4)	2220224
237	35.6	6.3	3.3	chr2	217001733	217001914	(25191615)	+	MIR3	SINE/MIR	6	189	(19)	2223771
467	30.9	10.2	6.8	chr2	217289483	217289867	(24903662)	C	MamTip3	DNA/hAT-Tip100	(67)	433	34	2224181
323	27.4	6.2	4.2	chr2	217713185	217713372	(24480157)	+	MIR3	SINE/MIR	15	217	(51)	2224836
413	28.0	9.8	0.6	chr2	217744313	217744488	(24449041)	C	MIRc	SINE/MIR	(28)	240	47	2224886
259	31.1	14.6	3.5	chr2	218332844	218333269	(23860260)	+	L2a	LINE/L2	2910	3390	(36)	2225888
660	30.4	2.6	3.8	chr2	218333481	218333716	(23859813)	C	MIRb	SINE/MIR	(14)	254	22	2225889
528	30.2	4.1	3.6	chr2	219470108	219470364	(22723165)	C	MIRb	SINE/MIR	(1)	267	3	2227995
2049	15.5	0.7	0.3	chr2	219533751	219534060	(22659469)	+	AluJb	SINE/Alu	1	311	(1)	2228090
1265	25.1	10.4	0.7	chr2	219534273	219534698	(22658831)	C	LTR33	LTR/ERVL	(43)	472	1	2228091
2033	15.0	1.0	0.3	chr2	220864518	220864823	(21328706)	+	AluJo	SINE/Alu	1	308	(4)	2230176
2060	24.5	9.8	6.0	chr2	220864824	220865176	(21328353)	+	L1ME3	LINE/L1	5822	6150	(12)	2230174
1162	7.7	0.0	0.0	chr2	220865181	220865336	(21328193)	+	L1PA8	LINE/L1	6017	6172	(0)	2230177
684	26.5	11.2	1.9	chr2	221061359	221061616	(21131913)	C	L2a	LINE/L2	(21)	3405	3121	2230472
1966	13.7	0.0	3.3	chr2	221996565	221996870	(20196659)	C	AluSz6	SINE/Alu	(16)	296	1	2231923
2303	13.6	2.8	1.9	chr2	222693477	222693837	(19499692)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2233004
500	21.1	4.3	6.3	chr2	222693982	222694123	(19499406)	+	MER91C	DNA/hAT-Tip100	1	139	(1)	2233005
2300	10.0	0.0	0.3	chr2	222774610	222774909	(19418620)	+	AluSx1	SINE/Alu	1	299	(13)	2233180
326	32.7	4.9	3.7	chr2	222775138	222775299	(19418230)	+	L2c	LINE/L2	3194	3344	(43)	2233181
5555	14.1	2.0	2.7	chr2	223389112	223390033	(18803496)	+	MER49	LTR/ERV1	1	915	(8)	2234147
759	24.9	7.5	1.3	chr2	223501110	223501333	(18692196)	C	MIR	SINE/MIR	(17)	245	7	2234319
1012	30.8	6.2	5.8	chr2	225947697	225947849	(16245680)	+	L1MEa	LINE/L1	2	132	(5938)	2238215
2558	10.9	1.4	2.2	chr2	225947850	225948216	(16245313)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2238216
368	23.1	6.9	3.2	chr2	229341747	229341871	(12851658)	C	L2a	LINE/L2	(0)	3426	3297	2243398
18	8.7	0.0	0.0	chr2	229341873	229341897	(12851632)	+	(TG)n	Simple_repeat	1	25	(0)	2243399
1936	26.7	11.0	3.4	chr2	230977626	230977832	(11215697)	+	L1MC5a	LINE/L1	632	849	(1928)	2246007
1547	13.0	13.3	0.0	chr2	230977833	230977975	(11215554)	C	AluJo	SINE/Alu	(8)	304	137	2246008
44	2.3	0.0	0.0	chr2	230977976	230978020	(11215509)	+	(TATT)n	Simple_repeat	1	45	(0)	2246009
556	18.0	0.0	0.0	chr2	231149397	231149485	(11044044)	+	FLAM_A	SINE/Alu	44	132	(10)	2246297
344	28.6	11.4	0.0	chr2	232216417	232216619	(9976910)	+	L2a	LINE/L2	3026	3254	(172)	2248355
219	31.7	6.2	4.6	chr2	232216627	232216801	(9976728)	C	L2	LINE/L2	(1592)	1827	1650	2248356
4445	13.0	3.2	0.1	chr2	233677563	233678316	(8515213)	+	L1PA16	LINE/L1	5378	6155	(11)	2250809
1782	10.9	10.9	1.5	chr2	235613022	235613295	(6580234)	C	AluSz	SINE/Alu	(9)	303	1	2253897
5186	19.7	1.8	1.4	chr2	237467521	237468563	(4724966)	C	L1MD2	LINE/L1	(10)	6349	5303	2256400
5338	13.8	2.2	1.9	chr2	240550559	240551705	(1641824)	+	LOR1-int	LTR/ERV1	4626	6064	(2056)	2260159
24602	19.5	2.9	3.0	chr20	7378403	7380397	(57063770)	C	ERVL-B4-int	LTR/ERVL	(45)	5669	3632	2275776
434	34.9	11.2	3.4	chr20	10065808	10066400	(54377767)	+	L2	LINE/L2	2209	2853	(566)	2279921
191	33.6	5.8	5.0	chr20	10928633	10928751	(53515416)	+	LFSINE_Vert	SINE/tRNA	297	416	(43)	2281281
358	21.2	0.0	1.2	chr20	11018538	11018618	(53425549)	C	L1ME3A	LINE/L1	(14)	6159	6080	2281414
205	36.6	10.1	2.2	chr20	11443359	11443719	(53000448)	C	L2c	LINE/L2	(44)	3343	2944	2282003
427	31.4	9.5	0.2	chr20	11582202	11582409	(52861758)	C	MIR	SINE/MIR	(4)	258	36	2282188
2104	12.4	0.3	2.2	chr20	11897877	11898190	(52545977)	+	AluSz	SINE/Alu	1	308	(4)	2282692
2543	28.7	11.4	4.4	chr20	11898191	11898652	(52545515)	+	L2a	LINE/L2	2910	3426	(0)	2282690
534	25.6	0.0	1.4	chr20	15678816	15678954	(48765213)	C	MER63D	DNA/hAT-Blackjack	(651)	410	274	2288255
2354	11.7	0.0	0.0	chr20	15678955	15679253	(48764914)	+	AluSx	SINE/Alu	1	299	(13)	2288256
241	24.6	6.7	3.1	chr20	18971381	18971510	(45472657)	+	L2c	LINE/L2	3033	3167	(220)	2293485
505	26.9	11.8	2.9	chr20	19561665	19561871	(44882296)	C	MIR	SINE/MIR	(0)	262	35	2294302
2960	17.8	0.2	0.6	chr20	19685602	19686100	(44758067)	C	LOR1a	LTR/ERV1	(0)	497	1	2294478
521	24.3	3.3	2.2	chr20	24548476	24548656	(39895511)	+	HAL1ME	LINE/L1	867	1049	(1416)	2301053
2452	10.8	0.6	4.3	chr20	26053714	26054082	(38390085)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2303199
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
4070	20.9	7.5	2.8	chr20	29428506	29430401	(35013766)	+	L1MA9	LINE/L1	4249	6312	(0)	2304112
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
24	23.1	0.0	0.0	chr20	30653592	30653661	(33790506)	+	(TGTG)n	Simple_repeat	1	70	(0)	2305323
11700	31.6	3.7	2.2	chr20	30850868	30853617	(33590550)	+	PRIMA41-int	LTR/ERV1	1728	4517	(3239)	2305514
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
2094	12.0	0.3	0.0	chr20	31931073	31931356	(32512811)	C	AluJo	SINE/Alu	(5)	307	23	2307216
198	24.8	4.0	9.1	chr20	32109192	32109323	(32334844)	C	L2a	LINE/L2	(62)	3364	3221	2307691
428	30.1	16.7	3.2	chr20	32503787	32504126	(31940041)	C	L1MC4	LINE/L1	(3723)	2492	2098	2308561
641	30.8	4.4	4.0	chr20	33121391	33121447	(31322720)	C	MIRb	SINE/MIR	(7)	261	207	2310002
2737	9.6	0.3	0.0	chr20	33121448	33121801	(31322366)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2310003
13	19.5	0.0	10.8	chr20	33443244	33443308	(31000859)	+	(CCCGCGC)n	Simple_repeat	1	65	(0)	2310733
712	23.7	10.8	4.6	chr20	35211013	35211213	(29232954)	C	Charlie2b	DNA/hAT-Charlie	(2567)	215	1	2314780
2054	10.0	5.4	0.0	chr20	35846183	35846463	(28597704)	C	AluSx1	SINE/Alu	(15)	297	1	2316234
1838	18.1	11.8	1.0	chr20	35846778	35847184	(28596983)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	2316235
252	28.3	18.4	2.4	chr20	35959093	35959215	(28484952)	+	MIRb	SINE/MIR	93	239	(29)	2316492
2442	10.9	1.4	2.5	chr20	35959330	35959697	(28484470)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2316493
743	17.0	4.0	7.7	chr20	36261350	36261531	(28182636)	C	AluJb	SINE/Alu	(11)	301	127	2317210
479	29.3	8.7	3.6	chr20	36261532	36261726	(28182441)	C	L2a	LINE/L2	(609)	2810	2605	2317208
1167	26.0	10.6	5.9	chr20	36286842	36287195	(28156972)	C	L1ME3	LINE/L1	(1034)	5112	4744	2317266
3701	17.8	2.0	3.0	chr20	36287198	36287966	(28156201)	C	L1MD2	LINE/L1	(0)	6359	5599	2317273
287	28.6	1.8	4.3	chr20	36427996	36428112	(28016055)	+	L1M5	LINE/L1	2975	3088	(3058)	2317601
778	11.8	8.9	2.5	chr20	36428200	36428356	(28015811)	C	MER3	DNA/hAT-Charlie	(0)	209	42	2317602
1692	26.4	19.2	5.9	chr20	36513583	36514421	(27929746)	C	L2a	LINE/L2	(620)	2799	1814	2317789
2196	9.8	4.6	4.3	chr20	37116504	37116699	(27327468)	+	THE1D	LTR/ERVL-MaLR	178	373	(8)	2319261
255	38.9	2.5	2.0	chr20	38113899	38114100	(26330067)	C	L3	LINE/CR1	(51)	4048	3846	2321412
405	33.6	14.5	0.3	chr20	38114089	38114372	(26329795)	C	L2a	LINE/L2	(0)	3426	3096	2321413
280	24.1	0.0	0.0	chr20	39181540	39181597	(25262570)	C	LTR16B2	LTR/ERVL	(0)	462	405	2323668
1928	17.2	1.8	1.8	chr20	39181609	39181995	(25262172)	+	MLT2B4	LTR/ERVL	1	358	(56)	2323669
18	15.4	2.2	2.2	chr20	40028625	40028669	(24415498)	+	A-rich	Low_complexity	1	46	(0)	2325109
1356	20.7	0.3	6.2	chr20	40028671	40028974	(24415193)	+	AluJr	SINE/Alu	2	287	(25)	2325110
14	24.2	2.3	0.0	chr20	40240387	40240430	(24203737)	+	(ATAC)n	Simple_repeat	1	45	(0)	2325426
24	22.8	0.0	0.0	chr20	40240699	40240749	(24203418)	+	(TC)n	Simple_repeat	1	51	(0)	2325427
109	1.9	0.9	0.0	chr20	40240765	40240872	(24203295)	+	(TAGA)n	Simple_repeat	1	109	(0)	2325428
326	31.4	3.5	0.7	chr20	40455017	40455154	(23989013)	C	MIRb	SINE/MIR	(76)	192	51	2325819
643	29.5	5.4	0.0	chr20	40827722	40827931	(23616236)	C	MIR	SINE/MIR	(39)	223	2	2326510
1417	21.0	5.1	9.0	chr20	40828116	40828503	(23615664)	+	MLT1A	LTR/ERVL-MaLR	3	374	(0)	2326511
298	33.3	3.2	5.5	chr20	40983090	40983216	(23460951)	+	L2b	LINE/L2	3252	3375	(0)	2326816
1009	21.0	6.4	11.8	chr20	42116070	42116382	(22327785)	+	MER103C	DNA/hAT-Charlie	3	297	(0)	2328698
316	26.7	12.5	4.5	chr20	42116383	42116561	(22327606)	+	MIRb	SINE/MIR	13	194	(74)	2328699
807	22.8	4.6	5.5	chr20	42116497	42116714	(22327453)	C	MIR	SINE/MIR	(0)	262	47	2328700
706	26.8	3.4	0.4	chr20	42363639	42363867	(22080300)	C	MIR	SINE/MIR	(11)	251	16	2329147
581	35.3	6.3	1.3	chr20	43025480	43025872	(21418295)	C	L3	LINE/CR1	(20)	4079	3666	2330291
422	18.4	0.0	5.4	chr20	43026018	43026109	(21418058)	+	MLT1B	LTR/ERVL-MaLR	1	87	(303)	2330292
990	23.1	6.0	1.3	chr20	44332119	44332355	(20111812)	C	MIR	SINE/MIR	(13)	249	1	2333218
2760	9.4	0.3	0.8	chr20	44864375	44864740	(19579427)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2334541
1365	24.0	8.5	7.2	chr20	45056689	45057213	(19386954)	C	LTR41B	LTR/ERVL	(0)	758	227	2334932
203	28.0	1.3	7.4	chr20	45447960	45448040	(18996127)	C	MIR3	SINE/MIR	(15)	193	118	2335662
466	26.9	0.9	2.5	chr20	45448425	45448542	(18995625)	+	L2a	LINE/L2	3311	3426	(0)	2335663
699	32.0	10.1	2.8	chr20	47546250	47546527	(16897640)	+	L2a	LINE/L2	2627	2921	(498)	2340389
2240	11.6	0.3	0.0	chr20	47546528	47546830	(16897337)	C	AluSp	SINE/Alu	(9)	304	1	2340390
699	29.8	20.3	1.5	chr20	47546831	47547238	(16896929)	+	L2a	LINE/L2	2922	3425	(1)	2340389
234	23.7	1.8	5.9	chr20	48126547	48126678	(16317489)	+	D20S16	Satellite	1	126	(3)	2341505
4074	18.7	2.7	4.4	chr20	48881448	48881488	(15562679)	C	L1MB8	LINE/L1	(1)	6177	6141	2343101
2207	12.2	0.0	0.0	chr20	48881489	48881784	(15562383)	C	AluSx4	SINE/Alu	(14)	296	1	2343102
4074	18.7	2.7	4.4	chr20	48881785	48882221	(15561946)	C	L1MB8	LINE/L1	(38)	6140	5690	2343101
402	28.9	6.1	10.5	chr20	49485680	49486004	(14958163)	+	L2b	LINE/L2	2638	2947	(472)	2344545
773	27.6	6.5	1.7	chr20	49688343	49688649	(14755518)	+	L1MEg1	LINE/L1	503	777	(5458)	2345050
17861	18.6	2.0	1.8	chr20	54789948	54795405	(9648762)	C	L1PREC2	LINE/L1	(1825)	6316	25	2356346
462	33.5	4.7	2.6	chr20	55784252	55784481	(8659686)	+	L2a	LINE/L2	2832	3066	(353)	2357901
91	19.5	3.3	1.4	chr20	56230345	56230559	(8213608)	+	GA-rich	Low_complexity	1	222	(0)	2358638
312	18.5	0.0	4.4	chr20	56230844	56230911	(8213256)	+	LTR85c	LTR/Gypsy?	444	508	(315)	2358639
528	22.4	9.9	0.2	chr20	57140832	57141006	(7303161)	C	MIRc	SINE/MIR	(26)	242	50	2360631
27	13.7	3.6	0.0	chr20	57141074	57141129	(7303038)	+	(TTTTGT)n	Simple_repeat	1	58	(0)	2360632
375	21.4	7.7	8.4	chr20	60160787	60160929	(4283238)	+	L1ME3E	LINE/L1	6031	6172	(1)	2365574
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
3424	19.3	3.5	9.5	chr21	9143369	9144153	(37565830)	C	LTR49-int	LTR/ERV1	(1013)	5318	4572	2374278
1738	18.7	0.7	1.0	chr21	9144154	9144447	(37565536)	C	AluJb	SINE/Alu	(18)	294	2	2374279
3424	21.2	4.9	9.9	chr21	9144448	9144867	(37565116)	C	LTR49-int	LTR/ERV1	(1760)	4571	4283	2374278
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
2354	10.3	2.0	0.8	chr21	13227447	13227797	(33482186)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2376155
804	20.8	4.3	0.6	chr21	13227800	13227978	(33482005)	C	L1MC3	LINE/L1	(330)	7455	7270	2376154
16	23.2	0.0	2.1	chr21	14216054	14216115	(32493868)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	2377523
913	12.6	0.8	4.4	chr21	17439219	17439353	(29270630)	+	FLAM_C	SINE/Alu	1	130	(13)	2381592
1736	18.5	0.0	2.3	chr21	17864246	17864548	(28845435)	+	AluJb	SINE/Alu	1	296	(16)	2382322
1900	13.7	1.1	0.0	chr21	19033458	19033734	(27676249)	+	AluSq2	SINE/Alu	17	296	(17)	2383786
2760	26.8	8.7	4.2	chr21	20507486	20508529	(26201454)	C	L1PA15-16	LINE/L1	(5792)	1523	9	2385730
2347	12.5	0.6	2.4	chr21	24528697	24529065	(22180918)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	2391235
4962	16.9	1.7	0.8	chr21	24640178	24641072	(22068911)	+	MER4D	LTR/ERV1	1	903	(0)	2391393
752	24.2	8.7	8.7	chr21	26674224	26674499	(20035484)	+	LTR16A1	LTR/ERVL	45	320	(136)	2394325
1280	25.5	10.4	8.7	chr21	29111275	29111622	(17598361)	C	HAL1	LINE/L1	(1627)	880	537	2397773
958	29.2	9.5	3.7	chr21	29111643	29112014	(17597969)	C	HAL1	LINE/L1	(2025)	482	75	2397773
2302	9.7	0.0	1.6	chr21	29112015	29112323	(17597660)	+	AluSc	SINE/Alu	1	304	(5)	2397776
476	9.6	0.0	1.4	chr21	30843522	30843595	(15866388)	C	MADE1	DNA/TcMar-Mariner	(5)	75	3	2400343
879	21.7	0.0	0.0	chr21	30843765	30843916	(15866067)	+	AluJr4	SINE/Alu	136	287	(25)	2400344
14	20.5	4.3	2.0	chr21	33139462	33139508	(13570475)	+	GA-rich	Low_complexity	1	49	(0)	2404370
1386	17.1	7.3	1.1	chr21	33648570	33648838	(13061145)	+	AluJr	SINE/Alu	6	292	(20)	2405373
28	18.1	4.5	0.0	chr21	33648854	33648919	(13061064)	+	GA-rich	Low_complexity	1	69	(0)	2405374
235	30.8	9.3	2.9	chr21	36615993	36616232	(10093751)	C	MIR	SINE/MIR	(6)	262	6	2410203
479	25.9	8.6	2.8	chr21	37445390	37445532	(9264451)	C	L2a	LINE/L2	(11)	3415	3264	2411607
1631	23.2	9.9	9.8	chr21	43696637	43696691	(3013292)	+	L1M4b	LINE/L1	1262	1309	(5558)	2420638
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
225	16.9	12.6	4.6	chr21	45136537	45136623	(1573360)	C	L2b	LINE/L2	(2)	3373	3279	2422575
549	26.1	0.0	0.0	chr21	46484126	46484255	(225728)	C	MER5A1	DNA/hAT-Charlie	(0)	166	37	2424030
1349	20.7	0.4	5.9	chr22	10708283	10708552	(40109916)	C	AluJr	SINE/Alu	(56)	256	2	2424540
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
376	29.1	0.0	1.0	chr22	11586410	11586513	(39231955)	+	L1MA9	LINE/L1	115	217	(5850)	2425208
453	27.2	0.0	0.0	chr22	11586516	11586618	(39231850)	+	AluJr	SINE/Alu	3	105	(207)	2425209
537	24.1	9.8	1.7	chr22	11586701	11586877	(39231591)	+	L1M3	LINE/L1	4542	4734	(1406)	2425210
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
1192	17.2	0.4	0.3	chr22	12351550	12364296	(38454172)	C	ALR/Alpha	Satellite/centr	(1)	12755	1	2425912
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
12	21.4	4.4	2.1	chr22	16386750	16386794	(34431674)	+	(CCG)n	Simple_repeat	1	47	(0)	2427258
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
406	33.1	5.3	3.9	chr22	19003871	19004128	(31814340)	+	L1ME3	LINE/L1	550	811	(5822)	2431293
235	28.8	1.4	1.4	chr22	19004168	19004241	(31814227)	+	L1ME3	LINE/L1	655	728	(5905)	2431293
1153	11.0	0.7	0.0	chr22	20338381	20338535	(30479933)	+	AluYm1	SINE/Alu	13	168	(143)	2433146
51	2.3	11.4	0.0	chr22	20338573	20338660	(30479808)	+	(AT)n	Simple_repeat	1	98	(0)	2433147
305	15.7	3.1	10.3	chr22	20595541	20595679	(30222789)	+	L1MCb	LINE/L1	2072	2246	(4505)	2433589
1701	13.9	4.2	0.4	chr22	20595699	20595950	(30222518)	C	AluJo	SINE/Alu	(48)	264	3	2433597
2294	10.7	0.0	0.0	chr22	23290926	23291224	(27527244)	+	AluSx1	SINE/Alu	1	299	(13)	2438048
268	27.1	13.0	0.9	chr22	23375493	23375600	(27442868)	C	Charlie15a	DNA/hAT-Charlie	(43)	181	59	2438209
280	31.5	8.9	6.0	chr22	23375667	23375983	(27442485)	+	L2c	LINE/L2	3021	3347	(40)	2438210
258	35.1	3.3	4.5	chr22	27751232	27751386	(23067082)	+	MIR3	SINE/MIR	35	187	(21)	2447433
428	28.6	16.0	2.3	chr22	28592940	28593111	(22225357)	+	LTR33B	LTR/ERVL	88	287	(216)	2448758
240	20.0	2.0	0.0	chr22	28593308	28593357	(22225111)	+	LTR33B	LTR/ERVL	381	431	(72)	2448758
74	5.0	0.0	0.0	chr22	28593439	28593522	(22224946)	+	(AGGT)n	Simple_repeat	1	84	(0)	2448759
215	23.4	0.0	0.0	chr22	31082180	31082226	(19736242)	C	L2b	LINE/L2	(2)	3373	3327	2453986
532	28.7	3.7	2.4	chr22	31943631	31943845	(18874623)	+	MIRb	SINE/MIR	19	250	(18)	2456005
16	12.1	5.6	0.0	chr22	31944032	31944067	(18874401)	+	G-rich	Low_complexity	1	38	(0)	2456006
2869	7.3	8.8	0.0	chr22	32396825	32397219	(18421249)	+	LTR3B	LTR/ERVK	1	433	(4)	2456869
309	23.3	10.8	0.0	chr22	32699530	32699645	(18118823)	+	MIR3	SINE/MIR	26	155	(53)	2457534
248	30.1	5.9	0.0	chr22	33027704	33027782	(17790686)	C	MIRc	SINE/MIR	(90)	140	60	2458222
183	33.3	2.6	2.6	chr22	33027818	33027894	(17790574)	C	MIR3	SINE/MIR	(34)	174	98	2458223
667	26.0	1.1	7.7	chr22	33027905	33028100	(17790368)	C	MIR	SINE/MIR	(66)	196	14	2458224
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2938	20.8	8.8	3.3	chr22	35860983	35862310	(14956158)	+	L1ME1	LINE/L1	4762	6179	(0)	2463863
364	31.1	9.8	2.6	chr22	36681672	36681823	(14136645)	+	MIRb	SINE/MIR	38	201	(67)	2465622
552	28.1	7.7	6.0	chr22	36684709	36684924	(14133544)	C	MIRb	SINE/MIR	(43)	225	6	2465627
2155	10.8	0.0	0.3	chr22	38283494	38283779	(12534689)	C	AluSx	SINE/Alu	(12)	300	16	2469177
17	6.2	7.9	4.9	chr22	38284303	38284340	(12534128)	+	GA-rich	Low_complexity	1	41	(0)	2469178
1680	16.6	4.6	3.6	chr22	38284376	38284676	(12533792)	+	AluJb	SINE/Alu	3	306	(6)	2469179
12	19.3	4.7	2.2	chr22	38656630	38656672	(12161796)	+	(GGCAGGC)n	Simple_repeat	1	45	(0)	2470029
207	38.1	0.5	1.5	chr22	39623160	39624212	(11194256)	+	(TG)n	Simple_repeat	1	1058	(0)	2472050
202	35.1	6.4	2.2	chr22	39624628	39624761	(11193707)	C	MIR3	SINE/MIR	(8)	200	61	2472051
646	20.5	13.6	2.8	chr22	39873721	39873891	(10944577)	+	L1ME3	LINE/L1	4923	5121	(1025)	2472463
2201	11.9	5.2	2.5	chr22	39873892	39874245	(10944223)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2472464
646	20.5	13.6	2.8	chr22	39874246	39874289	(10944179)	+	L1ME3	LINE/L1	5122	5165	(981)	2472463
1252	19.3	0.0	0.0	chr22	39874301	39874502	(10943966)	C	7SK	RNA	(66)	265	64	2472465
2125	21.6	7.6	4.1	chr22	39874516	39875278	(10943190)	+	L1ME3	LINE/L1	5152	5956	(206)	2472463
288	21.5	5.1	3.1	chr22	40908945	40909040	(9909428)	+	L3b	LINE/CR1	4967	5064	(168)	2474627
1622	13.2	14.7	0.0	chr22	42478542	42478844	(8339624)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2478157
2498	5.1	0.0	0.0	chr22	42553160	42553452	(8265016)	C	AluYe5	SINE/Alu	(17)	293	1	2478361
180	26.9	6.3	11.9	chr22	42553453	42553547	(8264921)	C	L2b	LINE/L2	(16)	3359	3265	2478360
184	30.0	4.1	0.0	chr22	45747076	45747145	(5071323)	C	UCON132b	DNA/hAT-Tip100	(4)	144	72	2484493
1768	21.1	0.7	1.3	chr22	45747220	45747522	(5070946)	+	AluJb	SINE/Alu	1	301	(11)	2484494
1196	8.9	6.0	0.0	chr22	45799076	45799232	(5019236)	C	AluSq	SINE/Alu	(8)	305	139	2484573
5701	24.5	10.1	8.0	chr22	45799233	45799305	(5019163)	+	L1ME1	LINE/L1	4774	4852	(1467)	2484568
2594	15.8	3.6	0.2	chr22	45799306	45799756	(5018712)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2484574
2481	9.0	0.0	0.0	chr22	47096540	47096851	(3721617)	+	AluSz6	SINE/Alu	1	312	(0)	2486428
579	29.4	6.3	10.3	chr22	47096911	47097333	(3721135)	C	L1M5	LINE/L1	(1164)	4982	4579	2486427
1489	9.9	1.3	0.0	chr22	47769497	47769719	(3048749)	C	L1MA2	LINE/L1	(0)	6304	6079	2487343
629	31.4	9.0	2.4	chr22	49440580	49441166	(1377302)	C	L1ME3A	LINE/L1	(61)	6112	5484	2489375
1175	13.7	2.2	1.6	chr22	50018080	50018261	(800207)	+	AluJb	SINE/Alu	128	310	(2)	2490073
685	23.5	19.3	7.2	chr22	50396525	50396695	(421773)	+	MER58B	DNA/hAT-Charlie	123	339	(2)	2490610
369	29.9	0.8	3.3	chr3	3778251	3778371	(194517188)	+	MIRb	SINE/MIR	144	261	(7)	2498004
1741	21.7	9.5	4.0	chr3	8484621	8485095	(189810464)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	2505444
779	29.6	9.7	2.7	chr3	8485096	8485298	(189810261)	+	L2c	LINE/L2	2851	3071	(348)	2505443
227	26.6	1.5	3.0	chr3	9669768	9669833	(188625726)	+	MER5B	DNA/hAT-Charlie	102	166	(12)	2507724
22	0.0	3.7	0.0	chr3	10165433	10165459	(188130100)	+	(GT)n	Simple_repeat	1	28	(0)	2508812
15	12.6	2.5	7.3	chr3	10165484	10165510	(188130049)	+	(AT)n	Simple_repeat	1	27	(0)	2508813
1546	26.6	7.6	6.1	chr3	10612849	10613548	(187682011)	+	MER21C	LTR/ERVL	132	842	(96)	2509766
1090	27.4	16.1	0.2	chr3	10613562	10614271	(187681288)	+	L2a	LINE/L2	2563	3426	(0)	2509765
1831	16.9	11.1	4.5	chr3	11411987	11412413	(186883146)	C	LOR1b	LTR/ERV1	(2)	459	1	2511416
7280	17.4	6.1	8.3	chr3	11412414	11413997	(186881562)	C	L1MB3	LINE/L1	(1257)	4883	3374	2511414
448	24.5	11.2	3.3	chr3	13816240	13816423	(184479136)	C	MIRc	SINE/MIR	(2)	266	64	2515960
61	33.2	1.4	0.9	chr3	13816680	13816901	(184478658)	+	(CATC)n	Simple_repeat	1	225	(0)	2515961
6461	9.0	0.8	0.1	chr3	13947706	13948635	(184346924)	C	L1PB1	LINE/L1	(5652)	1210	274	2516170
27201	12.1	2.2	1.1	chr3	13948636	13952946	(184342613)	C	PRIMA41-int	LTR/ERV1	(2036)	5720	1363	2516167
218	26.2	1.2	9.1	chr3	14409560	14409647	(183885912)	C	L2c	LINE/L2	(14)	3373	3293	2516898
218	22.8	1.7	13.6	chr3	14409794	14409859	(183885700)	C	MIR3	SINE/MIR	(42)	166	109	2516899
11818	9.0	1.0	0.5	chr3	15549419	15550990	(182744569)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2519040
263	36.2	10.2	0.4	chr3	16930670	16930899	(181364660)	+	L2c	LINE/L2	2331	2585	(834)	2521215
302	32.2	14.1	6.5	chr3	16931020	16931298	(181364261)	+	L2c	LINE/L2	3056	3359	(28)	2521215
21631	11.4	2.0	2.7	chr3	19117671	19124073	(179171486)	+	L1PA8	LINE/L1	13	6357	(0)	2524226
18725	15.8	6.9	3.9	chr3	19552868	19555761	(178739798)	C	L1M1	LINE/L1	(4544)	3021	17	2524816
2192	12.8	3.0	0.0	chr3	21601950	21602302	(176693257)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2527575
13	10.4	2.9	5.6	chr3	22113695	22113729	(176181830)	+	A-rich	Low_complexity	1	36	(0)	2528277
333	15.2	3.3	0.0	chr3	22113738	22113796	(176181763)	+	Alu	SINE/Alu	35	95	(206)	2528278
22820	10.6	0.9	2.7	chr3	24695822	24699928	(173595631)	C	L1PA7	LINE/L1	(2401)	4060	5	2532261
5752	9.5	2.1	5.9	chr3	28479518	28480855	(169814704)	C	L1PA13	LINE/L1	(3)	6160	4885	2537808
10335	17.5	3.5	1.9	chr3	30383689	30385506	(167910053)	C	L1MA1	LINE/L1	(5710)	1855	8	2540453
155	10.3	2.7	1.1	chr3	31424669	31424909	(166870650)	+	(GAAA)n	Simple_repeat	1	245	(0)	2542080
85	26.2	2.8	3.1	chr3	31424910	31424953	(166870606)	+	GA-rich	Low_complexity	1	293	(0)	2542081
1143	25.8	6.2	10.3	chr3	31425104	31425540	(166870019)	+	MLT1H	LTR/ERVL-MaLR	19	436	(113)	2542082
251	22.1	20.9	0.0	chr3	32218537	32218604	(166076955)	+	LTR33	LTR/ERVL	131	216	(299)	2543455
400	25.2	4.0	0.8	chr3	32218723	32218842	(166076717)	+	LTR33	LTR/ERVL	392	515	(0)	2543455
448	28.2	4.1	17.8	chr3	32552106	32552340	(165743219)	+	L2a	LINE/L2	3027	3225	(201)	2544089
617	19.0	2.5	2.5	chr3	32552341	32552461	(165743098)	C	FLAM_C	SINE/Alu	(21)	122	2	2544090
1110	8.2	0.0	0.0	chr3	32752694	32752828	(165542731)	+	AluSx	SINE/Alu	1	135	(177)	2544592
1807	17.9	0.7	0.0	chr3	33639069	33639353	(164656206)	C	AluJb	SINE/Alu	(21)	291	5	2546207
2931	16.6	1.1	6.2	chr3	37489794	37490371	(160805188)	C	LTR10A	LTR/ERV1	(54)	555	8	2551664
377	26.3	8.9	0.8	chr3	38391980	38392113	(159903446)	C	HAL1ME	LINE/L1	(1935)	530	385	2552991
963	26.9	1.4	2.0	chr3	38392149	38392296	(159903263)	C	L1ME3Cz	LINE/L1	(706)	291	144	2552992
323	32.1	1.8	0.0	chr3	38996600	38996708	(159298851)	+	L2a	LINE/L2	1498	1608	(1811)	2553817
228	21.7	17.9	2.8	chr3	38996715	38996785	(159298774)	+	MLT1H	LTR/ERVL-MaLR	13	96	(453)	2553818
700	17.7	0.8	4.0	chr3	38996787	38996910	(159298649)	+	AluJr	SINE/Alu	130	249	(63)	2553819
1274	30.5	3.0	2.0	chr3	38996939	38997699	(159297860)	+	L2a	LINE/L2	2651	3419	(7)	2553817
1733	28.4	7.7	3.0	chr3	39560813	39561008	(158734551)	+	L1ME3B	LINE/L1	4601	4797	(1349)	2554726
2057	13.4	7.7	3.2	chr3	39561009	39561355	(158734204)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2554728
1733	28.4	7.7	3.0	chr3	39561356	39561524	(158734035)	+	L1ME3B	LINE/L1	4798	4953	(1193)	2554726
444	31.0	6.6	3.0	chr3	39573140	39573342	(158722217)	C	MamRep605	LTR?	(163)	686	476	2554744
671	26.8	7.7	1.5	chr3	39573335	39573511	(158722048)	C	MamRep605	LTR?	(241)	608	416	2554745
4112	11.8	3.9	0.2	chr3	39573512	39574103	(158721456)	C	LTR27D	LTR/ERV1	(0)	615	1	2554746
526	28.8	7.4	5.8	chr3	40977854	40978303	(157317256)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	153	2556824
720	26.6	8.0	8.0	chr3	41027256	41027529	(157268030)	C	L2c	LINE/L2	(0)	3387	3114	2556896
2555	8.1	0.0	0.0	chr3	41918593	41918900	(156376659)	C	AluY	SINE/Alu	(3)	308	1	2558168
483	20.7	10.0	2.2	chr3	43095609	43095746	(155199813)	C	MIRb	SINE/MIR	(90)	178	29	2560127
2209	11.3	1.1	0.3	chr3	43658484	43658767	(154636792)	C	AluSx1	SINE/Alu	(26)	286	1	2560956
1058	25.5	7.0	3.0	chr3	43658768	43659025	(154636534)	+	L1ME3A	LINE/L1	5899	6163	(10)	2560954
26	14.1	1.7	3.3	chr3	50683813	50683871	(147611688)	+	(CTCCC)n	Simple_repeat	1	60	(0)	2573400
710	11.1	0.0	0.0	chr3	50683874	50683963	(147611596)	C	AluSz	SINE/Alu	(222)	90	1	2573401
241	38.3	9.9	2.4	chr3	50683965	50684346	(147611213)	+	L2c	LINE/L2	2959	3372	(15)	2573402
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
33	0.0	0.0	0.0	chr3	51500117	51500152	(146795407)	+	(A)n	Simple_repeat	1	36	(0)	2574462
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
891	19.4	3.9	8.3	chr3	53182569	53182701	(145112858)	+	MIR	SINE/MIR	139	262	(0)	2577153
2265	6.8	1.9	5.9	chr3	53322801	53323123	(144972436)	C	AluY	SINE/Alu	(1)	310	1	2577444
259	30.9	2.2	0.7	chr3	54043318	54043454	(144252105)	+	Plat_L3	LINE/CR1	3113	3251	(335)	2578466
213	30.3	17.4	0.0	chr3	54043565	54043673	(144251886)	C	L2a	LINE/L2	(1)	3425	3294	2578467
290	28.0	20.1	0.6	chr3	54043800	54043975	(144251584)	C	L2a	LINE/L2	(223)	3152	2934	2578467
1809	20.8	3.2	7.9	chr3	54452664	54452975	(143842584)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	178	2579085
1799	22.1	0.0	1.6	chr3	54452976	54453292	(143842267)	C	AluJo	SINE/Alu	(0)	312	1	2579089
1787	19.9	9.5	2.3	chr3	54604883	54605310	(143690249)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	1	2579283
255	31.2	6.1	8.1	chr3	54605474	54605707	(143689852)	+	L2a	LINE/L2	3117	3345	(81)	2579282
196	31.2	8.6	0.0	chr3	55189667	55189730	(143105829)	C	L3	LINE/CR1	(5)	4094	4025	2580083
1254	19.8	9.3	5.2	chr3	56795138	56795206	(141500353)	C	MER2	DNA/TcMar-Tigger	(276)	69	1	2582747
217	25.0	23.1	0.0	chr3	56795225	56795324	(141500235)	+	L3	LINE/CR1	3964	4093	(6)	2582749
1941	11.1	4.5	0.4	chr3	56795656	56795934	(141499625)	C	AluSg	SINE/Alu	(18)	292	2	2582750
540	15.6	4.0	1.0	chr3	57151792	57151887	(141143672)	+	AluJb	SINE/Alu	211	309	(3)	2583426
251	25.0	0.0	0.0	chr3	58252656	58252707	(140042852)	C	MER113A	DNA/hAT-Charlie	(258)	56	5	2585656
1568	19.3	1.3	9.9	chr3	60042339	60042763	(138252796)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	2588427
819	21.7	0.0	0.6	chr3	63067641	63067807	(135227752)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	2593383
2232	10.9	5.6	1.4	chr3	63416591	63416935	(134878624)	C	THE1B	LTR/ERVL-MaLR	(0)	364	5	2593996
512	18.1	14.7	0.8	chr3	63600101	63600234	(134695325)	+	MIR	SINE/MIR	94	249	(13)	2594321
632	28.4	2.6	0.0	chr3	63600287	63600476	(134695083)	+	LTR33	LTR/ERVL	26	220	(295)	2594322
2333	13.3	1.6	2.3	chr3	63600501	63600884	(134694675)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2594323
41	27.1	3.6	0.7	chr3	66201209	66201346	(132094213)	+	(TA)n	Simple_repeat	1	143	(0)	2598895
1710	28.4	10.1	2.0	chr3	67805528	67806216	(130489343)	C	L1PB4	LINE/L1	(6437)	772	22	2601420
16	21.4	0.0	0.0	chr3	68210671	68210708	(130084851)	+	(CTG)n	Simple_repeat	1	38	(0)	2602083
2239	22.6	5.6	1.6	chr3	68210757	68211272	(130084287)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	11	2602084
234	32.8	2.5	1.7	chr3	68245340	68245457	(130050102)	C	X6A_LINE	LINE/CR1	(89)	991	873	2602129
1261	22.7	3.4	7.5	chr3	68507970	68508341	(129787218)	C	MLT1A	LTR/ERVL-MaLR	(17)	357	2	2602589
200	35.6	13.2	1.7	chr3	68508437	68508556	(129787003)	C	MIRc	SINE/MIR	(60)	208	73	2602590
1249	26.8	13.2	1.4	chr3	70333875	70334366	(127961193)	+	Charlie7	DNA/hAT-Charlie	115	673	(1939)	2605682
471	27.6	5.5	3.1	chr3	71694701	71694894	(126600665)	+	MIR	SINE/MIR	48	246	(16)	2607645
388	29.8	5.8	0.8	chr3	72651038	72651169	(125644390)	C	Charlie23a	DNA/hAT-Charlie	(15)	324	186	2609652
345	19.1	3.1	0.0	chr3	72651233	72651295	(125644264)	+	LTR78B	LTR/ERV1	12	76	(1220)	2609653
1906	11.3	2.9	9.8	chr3	72904759	72905093	(125390466)	+	AluSz6	SINE/Alu	1	311	(1)	2610169
339	30.6	4.9	9.1	chr3	73722757	73723054	(124572505)	+	L1MEd	LINE/L1	538	822	(6264)	2611643
1395	29.5	3.7	1.7	chr3	75647835	75648337	(122647222)	C	BSR/Beta	Satellite	(50)	513	1	2614538
793	25.3	1.9	3.4	chr3	75648391	75649756	(122645803)	C	BSR/Beta	Satellite	(2)	1346	1	2614538
811	10.2	0.7	0.4	chr3	75748910	75754101	(122541458)	+	CER	Satellite	1	5208	(0)	2614668
13736	7.2	1.7	0.1	chr3	75810139	75811997	(122483562)	C	HERVK14-int	LTR/ERVK	(4207)	1889	1	2614734
1843	16.4	4.0	2.7	chr3	76676116	76676485	(121619074)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2615873
19	16.4	0.0	0.0	chr3	76676528	76676561	(121618998)	+	(TG)n	Simple_repeat	1	34	(0)	2615874
1296	23.3	9.3	5.8	chr3	77473870	77474422	(120821137)	+	LTR48B	LTR/ERV1	35	622	(0)	2616923
302	11.6	5.4	0.0	chr3	77474425	77474493	(120821066)	+	L1M2	LINE/L1	5538	5614	(551)	2616922
10289	27.4	2.9	3.1	chr3	77922309	77923855	(120371704)	+	HUERS-P3-int	LTR/ERV1	2857	4389	(4530)	2617463
3163	16.0	3.3	0.0	chr3	77923874	77924422	(120371137)	C	HSMAR2	DNA/TcMar-Mariner	(721)	581	14	2617465
3486	27.1	11.6	4.1	chr3	78161992	78163760	(120131799)	C	HAL1	LINE/L1	(378)	2129	192	2617754
638	22.9	1.7	2.3	chr3	83683845	83684018	(114611541)	C	MER53	DNA/hAT	(0)	193	21	2624856
570	29.6	0.7	0.0	chr3	83684071	83684222	(114611337)	C	MER5A	DNA/hAT-Charlie	(1)	188	36	2624857
5274	27.5	6.6	3.4	chr3	83928385	83929751	(114365808)	+	MER61-int	LTR/ERV1	749	2147	(5041)	2625170
901	17.1	20.8	13.7	chr3	87541921	87542321	(110753238)	+	LTR23	LTR/ERV1	1	437	(0)	2629664
2593	6.0	0.0	2.2	chr3	95367641	95367956	(102927603)	C	AluY	SINE/Alu	(0)	311	3	2635394
19	21.2	1.8	1.8	chr3	95368292	95368347	(102927212)	+	GA-rich	Low_complexity	1	57	(0)	2635395
30	18.5	0.0	0.0	chr3	95368495	95368549	(102927010)	+	A-rich	Low_complexity	1	55	(0)	2635396
5347	16.8	1.5	4.9	chr3	96161407	96163157	(102132402)	+	L1MC1	LINE/L1	4644	6332	(1)	2636349
2220	9.9	0.0	4.5	chr3	97640484	97640795	(100654764)	+	AluSp	SINE/Alu	1	298	(15)	2638057
1780	16.3	0.0	3.4	chr3	98496304	98496598	(99798961)	C	AluJb	SINE/Alu	(23)	289	5	2639001
6201	7.6	1.5	1.3	chr3	102049805	102050512	(96245047)	C	L1PA14	LINE/L1	(785)	5361	4647	2643990
2183	12.6	3.9	3.6	chr3	102050519	102050881	(96244678)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2643992
11930	9.1	0.3	0.0	chr3	102050882	102052456	(96243103)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2643992
1955	16.2	1.9	18.9	chr3	102392284	102392801	(95902758)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2644473
6243	22.6	2.0	0.6	chr3	103447497	103448746	(94846813)	+	L1M1	LINE/L1	158	1426	(6139)	2645810
7106	5.8	0.3	0.6	chr3	103448765	103449781	(94845778)	C	L1PA6	LINE/L1	(9)	6145	5130	2645811
1267	22.5	9.5	1.9	chr3	103730612	103730932	(94564627)	+	MLT1D	LTR/ERVL-MaLR	115	462	(43)	2646182
851	34.2	3.9	1.1	chr3	103730955	103731400	(94564159)	C	ERVL-E-int	LTR/ERVL	(2100)	3567	3109	2646180
306	24.4	35.4	6.7	chr3	107427719	107427988	(90867571)	C	Charlie19a	DNA/hAT-Charlie	(37)	349	1	2650826
15	14.8	2.6	2.5	chr3	107427998	107428036	(90867523)	+	(GGTTTT)n	Simple_repeat	1	40	(0)	2650827
502	29.7	9.8	0.6	chr3	107428137	107428302	(90867257)	+	MIRb	SINE/MIR	4	186	(82)	2650828
769	29.3	9.3	5.0	chr3	108042364	108042884	(90252675)	+	MLT1K	LTR/ERVL-MaLR	48	593	(2)	2651743
528	26.6	9.1	5.0	chr3	110771725	110771973	(87523586)	+	L2a	LINE/L2	2865	3124	(302)	2655685
34	0.0	0.0	0.0	chr3	110771978	110772006	(87523553)	+	(TG)n	Simple_repeat	1	29	(0)	2655686
373	29.9	6.6	0.8	chr3	110772009	110772136	(87523423)	+	L2a	LINE/L2	3283	3418	(8)	2655685
199	32.6	13.7	5.0	chr3	110793958	110794053	(87501506)	C	MIRb	SINE/MIR	(114)	154	45	2655716
920	23.0	18.7	5.3	chr3	110794054	110794466	(87501093)	C	LTR21A	LTR/ERV1	(0)	481	1	2655717
199	32.6	13.7	5.0	chr3	110794467	110794508	(87501051)	C	MIRb	SINE/MIR	(224)	44	2	2655716
22	0.0	0.0	0.0	chr3	111967976	111967999	(86327560)	+	(A)n	Simple_repeat	1	24	(0)	2657204
27	13.1	2.0	0.0	chr3	113211448	113211497	(85084062)	+	(CTC)n	Simple_repeat	1	51	(0)	2658907
36	25.1	2.9	0.9	chr3	113211709	113211813	(85083746)	+	(CA)n	Simple_repeat	1	108	(0)	2658908
2028	16.3	17.7	7.8	chr3	115520718	115521216	(82774343)	+	MER89	LTR/ERV1	1	559	(0)	2662222
3173	25.7	11.4	1.5	chr3	116631523	116632309	(81663250)	+	L1MD3	LINE/L1	5721	6624	(1371)	2663734
2068	12.7	7.1	2.6	chr3	116632310	116632656	(81662903)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2663735
3173	25.7	11.4	1.5	chr3	116632657	116633086	(81662473)	+	L1MD3	LINE/L1	6625	7074	(921)	2663734
472	32.6	16.4	3.3	chr3	120586932	120587528	(77708031)	C	L2b	LINE/L2	(0)	3375	2695	2669366
113	20.2	6.2	0.9	chr3	126274773	126275093	(72020466)	+	(TTCC)n	Simple_repeat	1	341	(0)	2678339
333	36.5	6.7	0.6	chr3	126486322	126486503	(71809056)	+	HAL1	LINE/L1	642	835	(1672)	2678661
442	33.5	3.1	0.0	chr3	127086041	127086225	(71209334)	+	L1M5	LINE/L1	5421	5611	(513)	2679483
1173	16.5	0.0	0.0	chr3	127086230	127086405	(71209154)	+	AluJb	SINE/Alu	137	312	(0)	2679484
1896	11.3	0.9	0.8	chr3	127891117	127891415	(70404144)	+	HERVIP10FH-int	LTR/ERV1	4	295	(7308)	2680864
304	23.2	12.8	0.0	chr3	127891453	127891577	(70403982)	+	HERVIP10FH-int	LTR/ERV1	288	365	(7420)	2680864
1431	6.4	13.8	0.0	chr3	127891790	127892008	(70403551)	+	HERVIP10F-int	LTR/ERV1	365	618	(7119)	2680865
223	37.2	5.2	0.0	chr3	128165086	128165249	(70130310)	C	MIRb	SINE/MIR	(22)	246	74	2681311
611	33.5	8.4	0.4	chr3	128383373	128383612	(69911947)	C	MIR	SINE/MIR	(0)	262	2	2681648
2165	9.2	5.7	0.7	chr3	129872917	129873200	(68422359)	C	AluSx1	SINE/Alu	(13)	299	1	2684563
1731	18.2	0.7	1.4	chr3	129873400	129873696	(68421863)	+	AluJr	SINE/Alu	1	295	(17)	2684564
1154	27.8	12.2	2.0	chr3	130525974	130526714	(67768845)	C	L2a	LINE/L2	(8)	3418	2581	2685624
5672	18.2	4.0	1.1	chr3	132116230	132117902	(66177657)	C	L1P4a	LINE/L1	(4007)	2778	982	2687943
1513	27.4	11.3	2.3	chr3	132378973	132379655	(65915904)	C	HAL1ME	LINE/L1	(1672)	793	42	2688384
934	35.2	15.6	3.1	chr3	135996763	135998334	(62297225)	+	L2c	LINE/L2	1383	3190	(197)	2693644
302	24.7	7.3	17.0	chr3	136049482	136049681	(62245878)	C	Charlie15a	DNA/hAT-Charlie	(1)	223	45	2693708
1492	25.5	2.2	3.6	chr3	136695937	136696404	(61599155)	C	MER65C	LTR/ERV1	(0)	461	1	2694866
1357	16.1	6.2	2.7	chr3	136696405	136696690	(61598869)	+	L1MC1	LINE/L1	6013	6310	(23)	2694867
7771	3.4	0.1	0.1	chr3	139612753	139614149	(58681410)	+	L1PA4	LINE/L1	4760	6155	(0)	2699603
2833	20.6	7.6	5.6	chr3	140953547	140953674	(57341885)	C	L1ME1	LINE/L1	(1)	6178	6057	2701558
1900	16.0	0.0	4.2	chr3	140953675	140953986	(57341573)	+	AluJr4	SINE/Alu	1	299	(13)	2701559
2833	23.3	10.2	6.6	chr3	140953987	140955058	(57340501)	C	L1ME1	LINE/L1	(123)	6056	4936	2701558
450	25.3	6.2	5.1	chr3	141878078	141878235	(56417324)	C	MIR3	SINE/MIR	(19)	189	30	2703067
297	25.7	15.3	4.6	chr3	142174621	142174771	(56120788)	+	MLT1M	LTR/ERVL-MaLR	4	173	(499)	2703685
318	31.0	3.5	7.5	chr3	142174786	142175050	(56120509)	+	MLT1M	LTR/ERVL-MaLR	221	474	(198)	2703685
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2633	17.9	10.1	6.6	chr3	142809002	142809639	(55485920)	C	MLT2F	LTR/ERVL	(0)	663	1	2704734
2139	13.6	3.0	3.8	chr3	143530202	143530568	(54764991)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2705799
24	2.6	2.2	6.5	chr3	143530640	143530684	(54764875)	+	(AAAC)n	Simple_repeat	1	46	(0)	2705800
25	13.1	6.8	0.0	chr3	143530685	143530697	(54764862)	+	A-rich	Low_complexity	2	63	(0)	2705801
441	29.2	6.4	1.7	chr3	143813401	143813637	(54481922)	+	LTR79	LTR/ERVL	97	345	(182)	2706185
12	13.5	2.8	5.4	chr3	144459694	144459729	(53835830)	+	(TTGTT)n	Simple_repeat	1	37	(0)	2707085
231	31.2	2.4	2.4	chr3	147152408	147152489	(51143070)	+	MER91A	DNA/hAT-Tip100	1	82	(114)	2710472
2413	20.7	1.7	2.5	chr3	147152595	147152612	(51142947)	C	L1M4	LINE/L1	(2155)	4489	4474	2710473
447	3.0	17.5	0.0	chr3	147152613	147152678	(51142881)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	2710474
2413	22.0	2.5	2.1	chr3	147152679	147153607	(51141952)	C	L1M4	LINE/L1	(2171)	4473	3353	2710473
192	27.4	15.7	2.4	chr3	149625879	149626005	(48669554)	C	AmnSINE1	SINE/5S-Deu-L2	(414)	161	15	2713936
13	0.0	4.2	4.0	chr3	150451223	150451246	(47844313)	+	(ATTT)n	Simple_repeat	1	25	(0)	2715237
11798	15.8	3.4	5.0	chr3	150989739	150990135	(47305424)	C	L1M4c	LINE/L1	(6031)	353	18	2716131
760	19.9	16.3	2.6	chr3	151769513	151769739	(46525820)	+	THE1C	LTR/ERVL-MaLR	1	264	(111)	2717240
2266	11.0	0.0	0.3	chr3	151769756	151770055	(46525504)	+	AluSx	SINE/Alu	1	299	(13)	2717241
2367	11.0	0.0	0.0	chr3	154997341	154997641	(43297918)	C	AluSx	SINE/Alu	(11)	301	1	2721879
1585	21.1	2.6	6.6	chr3	154997642	154997812	(43297747)	C	MLT1B	LTR/ERVL-MaLR	(215)	175	1	2721878
21	14.0	4.3	0.0	chr3	159734768	159734773	(38560786)	+	(TTTTC)n	Simple_repeat	1	44	(0)	2728647
24	12.2	0.0	0.0	chr3	159734774	159734809	(38560750)	+	(T)n	Simple_repeat	1	36	(0)	2728648
277	30.3	14.9	1.1	chr3	159734923	159735112	(38560447)	C	L3b	LINE/CR1	(129)	5103	4883	2728649
8273	11.5	1.4	0.7	chr3	163857550	163858790	(34436769)	+	THE1D-int	LTR/ERVL-MaLR	278	1631	(0)	2734253
1863	12.9	3.6	1.9	chr3	163858791	163859114	(34436445)	+	THE1D	LTR/ERVL-MaLR	1	330	(51)	2734253
526	24.1	8.8	11.9	chr3	163859261	163859622	(34435937)	+	L1MEi	LINE/L1	1351	1700	(512)	2734254
2513	9.6	3.1	0.0	chr3	164801339	164801682	(33493877)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2735386
193	25.9	6.4	6.4	chr3	168080157	168080231	(30215328)	+	MIR3	SINE/MIR	36	110	(120)	2739573
717	19.2	14.0	4.2	chr3	168080313	168080524	(30215035)	C	Charlie5	DNA/hAT-Charlie	(2388)	236	1	2739574
231	34.9	0.0	0.0	chr3	168080529	168080594	(30214965)	+	MIR3	SINE/MIR	97	162	(46)	2739573
517	32.8	8.1	1.4	chr3	168080602	168080879	(30214680)	C	MER102b	DNA/hAT-Charlie	(9)	332	35	2739575
180	35.7	4.9	5.8	chr3	171739013	171739116	(26556443)	C	L2c	LINE/L2	(13)	3374	3272	2745004
228	31.9	1.1	13.0	chr3	172038805	172038912	(26256647)	C	L2b	LINE/L2	(8)	3379	3276	2745517
848	14.7	0.0	2.2	chr3	172038920	172039055	(26256504)	+	FLAM_C	SINE/Alu	1	133	(10)	2745518
24	2.8	0.0	5.0	chr3	172039109	172039148	(26256411)	+	(AAAACAA)n	Simple_repeat	1	40	(0)	2745519
14077	14.3	4.0	0.5	chr3	176159077	176163807	(22131752)	+	L1PB1	LINE/L1	237	5148	(1714)	2751310
604	30.8	3.5	3.9	chr3	178850114	178850373	(19445186)	+	L2c	LINE/L2	2952	3210	(177)	2755268
2050	16.5	2.9	0.0	chr3	178850434	178850773	(19444786)	C	THE1B	LTR/ERVL-MaLR	(0)	364	15	2755269
609	28.8	3.9	3.9	chr3	197568920	197569150	(726409)	C	MIRb	SINE/MIR	(0)	268	38	2787138
2111	13.6	0.0	4.2	chr3	197837765	197838072	(457487)	+	AluSx1	SINE/Alu	1	295	(17)	2787637
726	23.3	0.0	0.0	chr3	197838139	197838267	(457292)	+	FLAM_A	SINE/Alu	1	129	(13)	2787638
1280	24.8	10.6	0.7	chr4	6688497	6688911	(183525644)	+	MLT1C	LTR/ERVL-MaLR	6	466	(1)	2798884
2345	11.5	4.4	2.5	chr4	6791820	6792176	(183422379)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2799108
366	24.1	8.9	5.3	chr4	6792177	6792352	(183422203)	C	L1ME4b	LINE/L1	(2062)	5820	5671	2799107
14	22.3	4.0	1.9	chr4	7842502	7842551	(182372004)	+	GA-rich	Low_complexity	1	51	(0)	2800757
16	0.0	0.0	0.0	chr4	7842687	7842703	(182371852)	+	(A)n	Simple_repeat	1	17	(0)	2800758
726	30.6	7.1	3.4	chr4	8735505	8735829	(181478726)	C	LTR16C	LTR/ERVL	(52)	437	100	2802230
11014	11.2	1.6	1.1	chr4	9577070	9578641	(180635914)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2803237
1275	20.6	2.5	1.2	chr4	9712625	9712944	(180501611)	C	MER33	DNA/hAT-Charlie	(0)	324	1	2803474
209	29.3	0.0	1.7	chr4	11049412	11049470	(179165085)	C	MIRb	SINE/MIR	(96)	172	115	2805550
406	21.6	1.7	12.3	chr4	11282523	11282717	(178931838)	+	MER96B	DNA/hAT-Tip100	244	417	(0)	2805929
2043	14.9	2.5	2.7	chr4	11282839	11283203	(178931352)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2805930
279	30.8	7.0	6.6	chr4	11410130	11410355	(178804200)	C	L2b	LINE/L2	(14)	3361	3135	2806159
2170	10.6	0.0	0.3	chr4	11410611	11410894	(178803661)	+	AluSg	SINE/Alu	1	283	(27)	2806160
4807	17.1	2.0	2.4	chr4	13682797	13683809	(176530746)	C	L1MA7	LINE/L1	(2)	7708	6699	2809706
1917	16.2	4.4	3.1	chr4	13683810	13684165	(176530390)	+	THE1B	LTR/ERVL-MaLR	4	364	(0)	2809707
985	20.9	8.2	0.0	chr4	15912063	15912296	(174302259)	+	MLT1B	LTR/ERVL-MaLR	11	265	(125)	2813455
525	23.0	0.9	4.2	chr4	15912814	15912931	(174301624)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2813456
570	19.2	0.8	9.1	chr4	17238657	17238799	(172975756)	C	MER94	DNA/hAT-Blackjack	(0)	134	4	2815795
21	20.2	0.0	2.3	chr4	17270618	17270632	(172943923)	+	GA-rich	Low_complexity	1	15	(0)	2815860
2165	13.6	0.3	0.0	chr4	17270633	17270927	(172943628)	+	AluSz	SINE/Alu	2	297	(15)	2815861
2159	11.9	0.7	0.0	chr4	17896297	17896581	(172317974)	C	AluSq2	SINE/Alu	(26)	287	1	2817078
18	26.5	0.0	3.3	chr4	17896582	17896592	(172317963)	+	(TTCT)n	Simple_repeat	4	14	(0)	2817079
4608	9.5	5.9	1.2	chr4	17896599	17897213	(172317342)	C	L1MA3	LINE/L1	(1)	6304	5654	2817080
194	30.5	1.7	7.8	chr4	20906828	20906955	(169307600)	C	L2	LINE/L2	(849)	2570	2451	2821626
256	30.3	4.8	3.9	chr4	21689400	21689502	(168525053)	C	MIRb	SINE/MIR	(114)	154	51	2822904
597	26.1	9.5	2.5	chr4	24372667	24372823	(165841732)	+	MIRb	SINE/MIR	26	194	(74)	2827012
19007	14.5	2.1	1.1	chr4	27687015	27693138	(162521417)	C	L1PA16	LINE/L1	(9)	6860	714	2832970
9274	13.9	3.5	3.7	chr4	32649401	32650983	(157563572)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2839727
2129	11.8	7.7	0.9	chr4	32650984	32651332	(157563223)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2839727
2107	12.2	5.8	2.3	chr4	35149719	35150069	(155064486)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2843052
276	25.0	0.6	3.1	chr4	40650980	40651075	(149563480)	+	L2a	LINE/L2	3302	3426	(0)	2852527
2054	17.3	3.1	17.6	chr4	43560176	43560744	(146653811)	+	MER66D	LTR/ERV1	1	484	(0)	2857140
1982	14.5	0.0	0.3	chr4	48763898	48764194	(141450361)	+	AluSx1	SINE/Alu	12	307	(5)	2864347
5675	16.3	7.3	3.9	chr4	48764195	48764247	(141450308)	+	L1M3	LINE/L1	4273	4321	(1819)	2864346
1989	17.2	0.0	0.6	chr4	48764248	48764560	(141449995)	+	AluJo	SINE/Alu	2	312	(0)	2864348
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
245	37.3	3.9	1.3	chr4	54170530	54170681	(136043874)	+	L2b	LINE/L2	3220	3375	(0)	2868867
12	31.8	1.4	4.1	chr4	54170709	54170780	(136043775)	+	(CTTCT)n	Simple_repeat	1	73	(0)	2868868
618	27.1	0.5	12.5	chr4	54170924	54171103	(136043452)	C	MLT1A1	LTR/ERVL-MaLR	(92)	316	154	2868869
2136	11.7	0.7	0.0	chr4	54171104	54171393	(136043162)	C	AluSx1	SINE/Alu	(19)	293	2	2868870
222	18.6	0.0	0.0	chr4	54356820	54356862	(135857693)	C	L2a	LINE/L2	(12)	3363	3321	2869170
1246	27.9	7.9	1.2	chr4	54356927	54357442	(135857113)	+	L1ME4b	LINE/L1	420	876	(16)	2869171
17	13.9	0.0	6.7	chr4	55125629	55125673	(135088882)	+	G-rich	Low_complexity	1	45	(0)	2870381
3354	16.0	1.1	7.8	chr4	56734937	56735425	(133479130)	+	L1MB3	LINE/L1	5518	5975	(208)	2873151
13524	19.0	5.7	2.0	chr4	58621931	58627538	(131587017)	+	L1PA12	LINE/L1	562	6412	(1729)	2876024
1590	28.0	9.8	6.5	chr4	59138014	59138895	(131075660)	C	ERV3-16A3_I-int	LTR/ERVL	(2705)	2521	1607	2876619
7013	19.9	11.6	6.2	chr4	59517004	59518952	(130695603)	C	MER52A	LTR/ERV1	(0)	2123	55	2877070
1329	20.7	8.5	2.3	chr4	64527016	64527366	(125687189)	C	LTR49	LTR/ERV1	(23)	572	198	2883258
783	8.0	0.0	0.0	chr4	64527374	64527486	(125687069)	+	MLT2A2	LTR/ERVL	1	113	(340)	2883259
20	16.3	0.0	5.6	chr4	77075643	77075696	(113138859)	+	G-rich	Low_complexity	1	54	(0)	2900312
18	12.6	0.0	0.0	chr4	77075885	77075911	(113138644)	+	(A)n	Simple_repeat	1	27	(0)	2900313
21	17.5	3.6	1.8	chr4	77075912	77075937	(113138618)	+	A-rich	Low_complexity	3	57	(0)	2900314
2608	6.8	0.0	0.0	chr4	79188304	79188611	(111025944)	+	AluY	SINE/Alu	1	308	(3)	2903289
16	5.3	0.0	0.0	chr4	80073583	80073602	(110140953)	+	(T)n	Simple_repeat	1	20	(0)	2904352
36	2.9	0.0	0.0	chr4	80195499	80195533	(110019022)	+	(TG)n	Simple_repeat	1	35	(0)	2904514
24	0.0	0.0	3.3	chr4	80195903	80195928	(110018627)	+	(AC)n	Simple_repeat	1	26	(0)	2904515
36	0.0	0.0	0.0	chr4	80195929	80195959	(110018596)	+	(AG)n	Simple_repeat	1	31	(0)	2904516
1580	14.7	5.3	7.8	chr4	82519302	82519402	(107695153)	C	MER44A	DNA/TcMar-Tigger	(2)	337	247	2907749
30	0.0	5.7	0.0	chr4	82519403	82519437	(107695118)	+	(TCTT)n	Simple_repeat	1	37	(0)	2907750
2167	10.4	0.0	0.7	chr4	82519438	82519726	(107694829)	C	AluSz	SINE/Alu	(25)	287	1	2907751
405	25.4	1.5	3.0	chr4	83920596	83920729	(106293826)	C	UCON5	Unknown	(77)	359	228	2910431
213	36.9	8.0	1.0	chr4	84960254	84960450	(105254105)	+	L2c	LINE/L2	3103	3314	(73)	2911897
384	31.1	11.9	4.6	chr4	89205626	89205996	(101008559)	+	MLT1J1	LTR/ERVL-MaLR	5	406	(38)	2918296
723	29.8	11.8	11.2	chr4	89531069	89531527	(100683028)	C	L2	LINE/L2	(2706)	713	246	2918778
2988	24.4	10.2	6.0	chr4	90536945	90538306	(99676249)	C	L1MC4	LINE/L1	(4664)	1551	126	2920075
18	12.9	0.0	8.0	chr4	90538311	90538360	(99676195)	+	(TAATT)n	Simple_repeat	1	50	(0)	2920076
723	27.1	5.8	1.9	chr4	94519310	94519523	(95695032)	C	MIRb	SINE/MIR	(18)	250	28	2925121
308	29.6	6.7	5.9	chr4	94519466	94519618	(95694937)	+	MIR	SINE/MIR	8	172	(96)	2925122
4255	18.3	3.3	0.8	chr4	98472684	98473452	(91741103)	C	L1MB7	LINE/L1	(20)	6164	5370	2930198
2499	0.4	0.0	0.0	chr4	98473453	98473715	(91740840)	C	AluYb8	SINE/Alu	(12)	306	44	2930199
2107	13.0	3.8	2.3	chr4	103882290	103882674	(86331881)	C	L1MA2	LINE/L1	(0)	6304	5914	2937564
3608	10.4	0.0	0.6	chr4	103882675	103883194	(86331361)	+	L1MA2	LINE/L1	5388	5904	(401)	2937564
11071	10.9	0.8	0.4	chr4	104620672	104622245	(85592310)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2938432
389	35.5	7.5	2.2	chr4	107080255	107080671	(83133884)	+	L1M4a1	LINE/L1	39	479	(5921)	2941634
1290	25.5	4.8	9.0	chr4	107751898	107752130	(82462425)	C	MLT2B2	LTR/ERVL	(144)	457	226	2942460
1525	17.2	7.3	0.4	chr4	107752131	107752386	(82462169)	+	AluJr	SINE/Alu	1	275	(37)	2942461
846	29.7	12.3	4.5	chr4	109212120	109212591	(81001964)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	82	2944616
362	34.5	10.3	2.8	chr4	110653851	110654065	(79560490)	C	MIRb	SINE/MIR	(34)	234	2	2946895
1502	19.4	3.5	0.0	chr4	111726251	111726502	(78488053)	C	AluJb	SINE/Alu	(51)	261	1	2948173
10378	10.7	4.3	0.7	chr4	113984685	113986207	(76228348)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2951533
2544	11.3	0.6	0.6	chr4	113986208	113986571	(76227984)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2951533
254	36.2	6.9	9.2	chr4	122861025	122861483	(67353072)	+	L2c	LINE/L2	2148	2595	(824)	2963135
12	29.9	2.1	0.0	chr4	122861486	122861532	(67353023)	+	(CTTC)n	Simple_repeat	1	48	(0)	2963139
624	32.8	6.4	9.2	chr4	122861708	122862187	(67352368)	+	L2c	LINE/L2	2922	3387	(0)	2963135
12049	17.2	5.6	0.9	chr4	123731081	123732624	(66481931)	C	L1PA17	LINE/L1	(1812)	4334	2743	2964413
17024	20.0	3.2	1.5	chr4	124367974	124374964	(65839591)	C	L1PA15	LINE/L1	(0)	8160	835	2965194
2771	14.3	3.2	4.9	chr4	128620701	128621079	(61593476)	+	L1MA4A	LINE/L1	7765	8149	(149)	2970990
2408	8.9	0.0	0.3	chr4	128621080	128621383	(61593172)	C	AluSx	SINE/Alu	(9)	303	1	2971000
193	31.4	3.5	8.1	chr4	129445784	129445932	(60768623)	C	L3	LINE/CR1	(1801)	2298	2157	2972183
23013	11.4	1.3	2.1	chr4	129445940	129452232	(60762323)	+	L1PA8	LINE/L1	130	6356	(1)	2972187
1117	21.8	8.7	5.2	chr4	129693602	129694139	(60520416)	+	MER67C	LTR/ERV1	1	514	(0)	2972481
2504	15.1	2.6	0.2	chr4	130687019	130687436	(59527119)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2973733
14	8.1	12.8	0.0	chr4	130687450	130687491	(59527064)	+	(TTTGC)n	Simple_repeat	1	47	(0)	2973734
4452	12.7	5.1	1.9	chr4	132809181	132809953	(57404602)	+	LTR1A1	LTR/ERV1	1	799	(0)	2976267
369	30.6	7.5	4.4	chr4	133247034	133247214	(56967341)	C	MLT1J	LTR/ERVL-MaLR	(323)	189	3	2976755
2937	15.4	0.2	0.6	chr4	133384618	133385093	(56829462)	C	L1PA16	LINE/L1	(61)	6105	5632	2976907
1184	23.6	3.6	3.9	chr4	133385094	133385497	(56829058)	+	MER52D	LTR/ERV1	502	864	(1259)	2976909
5271	23.9	3.0	6.2	chr4	133706456	133708225	(56506330)	C	L1MB4	LINE/L1	(0)	6416	4712	2977280
2108	13.9	7.1	1.5	chr4	134989009	134989351	(55225204)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2978740
2881	18.2	1.3	6.2	chr4	136327574	136328217	(53886338)	C	LTR9	LTR/ERV1	(0)	612	1	2980321
7577	21.4	3.0	3.4	chr4	136328218	136329912	(53884643)	+	L1PA16	LINE/L1	32	1817	(4872)	2980320
5056	9.3	1.2	3.5	chr4	138388882	138389626	(51824929)	C	L1PA10	LINE/L1	(3)	6165	5438	2982836
221	30.9	3.9	12.1	chr4	138389684	138389823	(51824732)	+	MIR3	SINE/MIR	14	141	(67)	2982837
289	33.6	0.0	0.8	chr4	138389988	138390110	(51824445)	+	MER103C	DNA/hAT-Charlie	161	282	(15)	2982838
13	4.3	0.0	7.1	chr4	147732031	147732058	(42482497)	+	(GGGGC)n	Simple_repeat	1	28	(0)	2996130
3028	14.4	4.9	0.2	chr4	148380190	148380709	(41833846)	C	L1MB7	LINE/L1	(255)	5929	5384	2997046
307	10.9	0.0	0.0	chr4	148426725	148426770	(41787785)	+	MADE1	DNA/TcMar-Mariner	35	80	(0)	2997108
266	21.4	5.3	9.2	chr4	148431402	148431499	(41783056)	C	MIR3	SINE/MIR	(33)	175	82	2997111
803	30.1	7.4	3.5	chr4	150374911	150375258	(39839297)	C	LTR33	LTR/ERVL	(0)	515	153	2999669
791	17.3	0.0	4.3	chr4	150749288	150749426	(39465129)	+	FLAM_C	SINE/Alu	1	133	(10)	3000199
1332	16.3	0.7	9.2	chr4	150749427	150749481	(39465074)	+	L1M3	LINE/L1	5151	5201	(939)	3000196
1572	16.8	4.0	4.3	chr4	150749483	150749786	(39464769)	+	AluJr	SINE/Alu	10	312	(0)	3000200
2450	15.9	2.1	1.4	chr4	153027402	153027823	(37186732)	C	MSTB	LTR/ERVL-MaLR	(1)	425	1	3003908
8295	17.1	6.4	1.0	chr4	153027824	153029383	(37185172)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	3003908
6532	14.0	7.6	3.2	chr4	153417608	153417816	(36796739)	C	Tigger3b	DNA/TcMar-Tigger	(678)	553	340	3004607
2338	10.3	0.7	0.0	chr4	153417817	153418130	(36796425)	C	AluSx	SINE/Alu	(0)	312	1	3004612
43	2.3	0.0	0.0	chr4	153466265	153466308	(36748247)	+	(GCGGG)n	Simple_repeat	1	44	(0)	3004724
2245	16.4	3.8	1.8	chr4	161319525	161319905	(28894650)	+	MER1A	DNA/hAT-Charlie	1	389	(140)	3015183
1921	18.0	3.1	3.1	chr4	161319906	161320260	(28894295)	C	THE1B	LTR/ERVL-MaLR	(0)	364	10	3015184
2182	11.6	0.3	0.0	chr4	162026300	162026593	(28187962)	C	AluSq2	SINE/Alu	(4)	309	15	3016149
503	36.3	6.7	3.4	chr4	162833141	162833528	(27381027)	+	LTR16E1	LTR/ERVL	105	506	(32)	3017248
9153	12.2	1.7	15.7	chr4	164458661	164460503	(25754052)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3019448
2539	10.3	0.6	3.0	chr4	164460506	164460876	(25753679)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3019448
1207	25.0	5.2	3.9	chr4	164679035	164679492	(25535063)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	4	3019697
182	24.4	7.2	9.3	chr4	165390122	165390207	(24824348)	+	L2c	LINE/L2	3268	3351	(36)	3021011
3310	13.6	3.0	0.0	chr4	166419217	166419791	(23794764)	C	L1M1	LINE/L1	(4858)	2707	2115	3022370
4488	21.1	3.8	1.9	chr4	166502018	166503223	(23711332)	C	L1PA17	LINE/L1	(5558)	1315	2	3022460
324	29.3	13.5	2.0	chr4	166844199	166844348	(23370207)	+	MIRb	SINE/MIR	53	222	(46)	3022844
2667	17.8	6.9	3.0	chr4	168928452	168929049	(21285506)	C	MLT1E3	LTR/ERVL-MaLR	(1)	623	1	3025529
3664	27.9	5.2	6.2	chr4	174947885	174949736	(15264819)	C	L1PA15	LINE/L1	(4731)	2054	6	3033609
568	28.8	5.8	2.3	chr4	185532992	185533208	(4681347)	+	MIRb	SINE/MIR	27	251	(17)	3048439
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1449	25.7	12.9	9.4	chr5	2227709	2228868	(179309391)	+	L1M8	LINE/L1	459	1665	(690)	3057057
206	23.6	16.3	1.4	chr5	8494538	8494610	(173043649)	C	L2c	LINE/L2	(42)	3345	3260	3064396
1456	22.8	8.7	0.5	chr5	9243088	9243511	(172294748)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	3065270
252	23.4	9.2	7.1	chr5	11395928	11396097	(170142162)	C	L2c	LINE/L2	(40)	3347	3174	3068236
185	35.3	4.5	0.0	chr5	11473206	11473290	(170064969)	+	MamRTE1	LINE/RTE-BovB	3379	3467	(345)	3068343
1868	15.7	8.1	1.1	chr5	12568616	12568969	(168969290)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3069738
3559	10.4	8.1	7.0	chr5	15548590	15549176	(165989083)	C	PRIMA4_LTR	LTR/ERV1	(0)	594	1	3073720
48	27.7	0.0	0.0	chr5	17400682	17400815	(164137444)	+	(ACACAC)n	Simple_repeat	1	134	(0)	3076778
16	0.0	0.0	0.0	chr5	17743551	17743567	(163794692)	+	(T)n	Simple_repeat	1	17	(0)	3077177
13398	15.3	4.3	2.5	chr5	25873283	25874745	(155663514)	C	L1MA3	LINE/L1	(4928)	2637	1099	3087867
545	17.4	4.2	0.9	chr5	25874743	25874858	(155663401)	C	L1MA3	LINE/L1	(7432)	133	14	3087867
7653	12.8	1.6	0.0	chr5	26707489	26708621	(154829638)	+	THE1B-int	LTR/ERVL-MaLR	1	1152	(428)	3088879
13	0.0	9.1	0.0	chr5	28650483	28650504	(152887755)	+	(TGT)n	Simple_repeat	1	24	(0)	3091416
2945	19.6	3.5	10.7	chr5	28650523	28651343	(152886916)	C	L1MA7	LINE/L1	(165)	6126	5367	3091417
1193	29.0	10.4	2.1	chr5	28696780	28697389	(152840870)	+	L2	LINE/L2	2255	2920	(499)	3091480
2005	10.8	5.3	0.0	chr5	31885913	31886198	(149652061)	C	AluSq	SINE/Alu	(11)	302	1	3095780
262	28.3	11.7	1.7	chr5	32036816	32036930	(149501329)	+	MIRc	SINE/MIR	20	147	(121)	3096058
637	27.4	7.9	1.0	chr5	32670775	32670973	(148867286)	C	ERVL-int	LTR/ERVL	(1127)	4540	4327	3097301
1296	29.4	4.9	0.3	chr5	32671025	32671410	(148866849)	C	ERVL-int	LTR/ERVL	(1461)	4296	3892	3097301
2612	13.9	4.3	0.0	chr5	32724874	32725277	(148812982)	+	L1PA16	LINE/L1	5743	6164	(2)	3097360
246	33.3	1.4	5.5	chr5	33593886	33594031	(147944228)	+	MIRc	SINE/MIR	93	232	(36)	3098603
1918	15.8	3.3	2.7	chr5	33594037	33594368	(147943891)	+	THE1B	LTR/ERVL-MaLR	1	334	(30)	3098604
2829	10.6	7.6	0.2	chr5	34414663	34415099	(147123160)	+	MER4C	LTR/ERV1	1	472	(0)	3099767
2521	8.3	17.3	4.8	chr5	34415103	34415599	(147122660)	+	MER4-int	LTR/ERV1	1	559	(6039)	3099767
11146	12.4	0.9	0.8	chr5	41642151	41644682	(139893577)	+	L1PA15	LINE/L1	3628	6159	(6)	3110660
5473	17.8	3.2	4.5	chr5	43090777	43092667	(138445592)	C	LTR49-int	LTR/ERV1	(4662)	1669	1	3112520
11340	10.4	0.6	0.0	chr5	43945687	43947257	(137591002)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3113736
2059	15.5	3.6	3.1	chr5	43947258	43947617	(137590642)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	3113736
470	30.7	8.1	6.5	chr5	44091501	44091746	(137446513)	C	MLT1H2	LTR/ERVL-MaLR	(206)	343	57	3113876
1991	11.8	6.6	1.4	chr5	45668209	45668569	(135869690)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3115848
239	20.3	1.7	0.0	chr5	53368443	53368501	(128169758)	C	L1ME4b	LINE/L1	(77)	815	756	3120153
775	28.1	7.4	3.1	chr5	53596960	53597456	(127940803)	C	MLT1G1	LTR/ERVL-MaLR	(10)	569	1	3120511
313	31.0	12.7	2.0	chr5	53760681	53760828	(127777431)	+	MER131	DNA?	1	166	(49)	3120692
312	32.0	5.4	0.1	chr5	59002100	59002240	(122536019)	C	MIR3	SINE/MIR	(15)	193	47	3128904
204	18.3	0.0	6.2	chr5	59002241	59002301	(122535958)	+	MIR	SINE/MIR	95	147	(121)	3128905
426	29.0	9.4	13.5	chr5	59002358	59002860	(122535399)	+	MLT1H1	LTR/ERVL-MaLR	76	555	(0)	3128906
1283	36.4	8.7	2.8	chr5	60008481	60009379	(121528880)	C	L3	LINE/CR1	(384)	3715	2759	3130300
322	27.6	12.1	1.6	chr5	61470185	61470309	(120067950)	C	Tigger18a	DNA/TcMar-Tigger	(658)	194	55	3132316
367	31.1	7.6	3.3	chr5	61470338	61470550	(120067709)	C	L1M5	LINE/L1	(1280)	4866	4644	3132318
671	23.1	14.5	6.3	chr5	61791368	61791654	(119746605)	C	MER102c	DNA/hAT-Charlie	(9)	332	10	3132801
2604	17.6	3.9	3.4	chr5	67801618	67802205	(113736054)	+	L1MA7	LINE/L1	5700	6290	(1)	3141262
739	29.1	5.0	2.6	chr5	67825213	67825445	(113712814)	+	MIRb	SINE/MIR	2	240	(28)	3141290
770	23.4	12.9	0.5	chr5	71944956	71945165	(109593094)	+	MIR	SINE/MIR	2	241	(21)	3148275
518	24.8	4.2	8.8	chr5	71945118	71945332	(109592927)	C	MIRb	SINE/MIR	(5)	263	70	3148276
339	26.2	5.4	5.4	chr5	73281532	73281660	(108256599)	C	UCON62	DNA?	(36)	141	13	3150264
236	23.8	12.2	3.8	chr5	75948233	75948337	(105589922)	+	MER103C	DNA/hAT-Charlie	36	150	(147)	3154280
1415	29.4	7.2	4.6	chr5	75948349	75948920	(105589339)	C	L2a	LINE/L2	(0)	3426	2869	3154281
2330	15.2	6.3	0.5	chr5	75948921	75949323	(105588936)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3154282
945	23.7	12.6	9.9	chr5	76493093	76493775	(105044484)	+	L2a	LINE/L2	2729	3420	(6)	3155116
1789	18.6	4.6	8.3	chr5	77424531	77424819	(104113440)	C	Charlie1a	DNA/hAT-Charlie	(917)	538	257	3156658
747	23.1	1.2	1.8	chr5	77424820	77424988	(104113271)	C	AluJo	SINE/Alu	(8)	304	137	3156659
1789	18.6	4.6	8.3	chr5	77424989	77425131	(104113128)	C	Charlie1a	DNA/hAT-Charlie	(1199)	256	123	3156658
362	35.6	8.2	6.1	chr5	79302715	79303154	(102235105)	C	L2c	LINE/L2	(577)	2842	2393	3159527
1016	14.2	5.7	6.6	chr5	82079179	82079374	(99458885)	C	THE1B	LTR/ERVL-MaLR	(0)	364	171	3164120
14922	4.8	0.6	0.0	chr5	82079375	82081993	(99456266)	C	L1PA5	LINE/L1	(7)	6147	3517	3164121
275	33.6	9.2	0.7	chr5	82966404	82966584	(98571675)	C	MIRb	SINE/MIR	(8)	260	61	3165345
311	33.9	4.5	5.2	chr5	82966628	82966761	(98571498)	+	MamSINE1	SINE/tRNA-RTE	2	134	(156)	3165346
248	28.9	7.8	3.5	chr5	82966772	82966857	(98571402)	+	MamSINE1	SINE/tRNA-RTE	182	271	(19)	3165346
1969	13.6	6.6	0.6	chr5	88429937	88430292	(93107967)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	3172316
14640	21.6	4.8	2.8	chr5	89640569	89643607	(91894652)	+	L1MA4A	LINE/L1	2298	5439	(2123)	3173816
229	26.7	1.1	10.0	chr5	91222068	91222167	(90316092)	+	L2a	LINE/L2	3335	3425	(1)	3175826
8285	25.3	11.9	1.8	chr5	92504064	92507003	(89031256)	+	L1M4b	LINE/L1	11	3230	(3637)	3177544
7855	10.3	0.9	0.9	chr5	93374979	93375909	(88162350)	+	L1MA3	LINE/L1	4125	5053	(1093)	3178615
204	27.2	1.2	4.7	chr5	94237112	94237196	(87301063)	+	MIRc	SINE/MIR	166	247	(21)	3179585
216	32.1	3.6	1.9	chr5	94237395	94237502	(87300757)	C	L2b	LINE/L2	(311)	3064	2955	3179586
212	38.4	6.1	5.1	chr5	96431208	96431561	(85106698)	+	L2c	LINE/L2	2991	3348	(39)	3182551
2052	15.6	0.8	1.1	chr5	101259479	101259834	(80278425)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3188697
2964	1.0	0.0	0.0	chr5	103694867	103695177	(77843082)	+	AluY	SINE/Alu	1	311	(0)	3191787
491	27.0	2.5	1.9	chr5	104943625	104943786	(76594473)	C	MER5A1	DNA/hAT-Charlie	(1)	165	3	3193268
1614	26.0	11.2	2.4	chr5	104943822	104944360	(76593899)	+	L1MEg	LINE/L1	2987	3618	(3619)	3193266
299	24.7	9.1	4.5	chr5	106933612	106933768	(74604491)	C	MER63D	DNA/hAT-Blackjack	(45)	165	1	3195734
2390	8.0	1.6	0.0	chr5	107057677	107057975	(74480284)	+	AluSc	SINE/Alu	1	304	(5)	3195879
239	31.8	4.5	7.0	chr5	107057976	107058058	(74480201)	C	MER5A	DNA/hAT-Charlie	(53)	136	50	3195878
245	30.6	6.7	3.5	chr5	107057977	107058091	(74480168)	+	MER5A	DNA/hAT-Charlie	65	183	(6)	3195880
669	31.7	8.3	2.1	chr5	107058472	107058797	(74479462)	+	MamRep1527	LTR	291	638	(331)	3195881
233	35.8	5.8	4.1	chr5	107465888	107466119	(74072140)	C	MIRc	SINE/MIR	(25)	243	12	3196382
31	9.8	0.0	0.0	chr5	108601481	108601524	(72936735)	+	(GA)n	Simple_repeat	1	44	(0)	3197856
831	30.0	11.4	9.2	chr5	108601529	108602346	(72935913)	+	L1MC4	LINE/L1	7103	7495	(547)	3197857
1581	18.1	7.9	0.7	chr5	108704585	108704866	(72833393)	+	AluJb	SINE/Alu	2	305	(7)	3198007
2127	13.5	1.0	0.3	chr5	108705049	108705352	(72832907)	C	AluSz6	SINE/Alu	(6)	306	1	3198008
268	32.5	2.5	7.1	chr5	110087491	110087616	(71450643)	C	L2b	LINE/L2	(0)	3375	3256	3199853
25	13.9	0.0	0.0	chr5	110273287	110273326	(71264933)	+	(A)n	Simple_repeat	1	40	(0)	3200036
1032	10.8	33.0	0.0	chr5	110273863	110274127	(71264132)	+	THE1D	LTR/ERVL-MaLR	1	353	(28)	3200037
49	0.0	0.0	0.0	chr5	111486501	111486542	(70051717)	+	(AC)n	Simple_repeat	1	42	(0)	3201498
892	21.2	0.0	0.0	chr5	112565315	112565460	(68972799)	C	AluJr	SINE/Alu	(31)	281	136	3202925
181	16.7	0.0	0.0	chr5	112565631	112565660	(68972599)	C	MIR	SINE/MIR	(13)	249	220	3202926
1478	31.9	8.5	5.3	chr5	113462771	113464215	(68074044)	C	L2b	LINE/L2	(0)	3387	1894	3204336
2263	28.2	10.2	6.6	chr5	113967669	113968635	(67569624)	C	HAL1b	LINE/L1	(614)	1807	775	3205003
6423	6.9	0.5	0.9	chr5	114681510	114682370	(66855889)	+	L1PA7	LINE/L1	5298	6154	(0)	3205858
19858	12.4	2.9	1.1	chr5	115740054	115746969	(65791290)	C	L1M1	LINE/L1	(669)	7054	10	3207216
1113	29.1	8.2	5.8	chr5	115782477	115783837	(65754422)	C	L1MEi	LINE/L1	(3508)	2638	1175	3207281
26	26.6	1.9	4.6	chr5	115783838	115783944	(65754315)	+	(TTCC)n	Simple_repeat	1	109	(0)	3207282
313	27.7	11.4	0.0	chr5	115784215	115784362	(65753897)	C	L1MEi	LINE/L1	(1481)	984	818	3207281
2218	12.5	1.1	2.2	chr5	120589497	120589855	(60948404)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3213710
1798	22.5	1.9	9.1	chr5	121286885	121287446	(60250813)	+	LTR8	LTR/ERV1	1	521	(170)	3214516
11384	15.4	3.4	1.9	chr5	123314523	123320769	(58217490)	C	L1PA8	LINE/L1	(11)	6476	6	3217222
216	26.2	8.0	3.7	chr5	126889795	126889964	(54648295)	C	X6B_LINE	LINE/CR1	(192)	880	716	3222145
1764	14.9	5.1	8.2	chr5	129397337	129397724	(52140535)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3225273
1317	11.7	6.1	0.5	chr5	134814106	134814320	(46723939)	+	Tigger7	DNA/TcMar-Tigger	2262	2489	(2)	3233424
11653	12.8	1.2	0.5	chr5	136742267	136743885	(44794374)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3236062
2344	12.5	0.6	0.6	chr5	139432636	139432998	(42105261)	C	Tigger2	DNA/TcMar-Tigger	(1195)	1523	1161	3240754
420	20.3	1.3	0.0	chr5	139432999	139433072	(42105187)	+	AluSq10	SINE/Alu	1	75	(238)	3240755
749	13.1	3.2	0.0	chr5	139433088	139433209	(42105050)	C	Tigger2	DNA/TcMar-Tigger	(1777)	941	816	3240754
14	27.4	0.0	1.9	chr5	140113737	140113752	(41424507)	+	(CAGCAG)n	Simple_repeat	1	15	(0)	3242043
29	0.0	0.0	0.0	chr5	140113753	140113779	(41424480)	+	(GGT)n	Simple_repeat	1	27	(0)	3242044
14	27.4	0.0	1.9	chr5	140113780	140113815	(41424444)	+	(CAGCAG)n	Simple_repeat	4	39	(0)	3242045
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
2121	12.5	0.0	0.7	chr5	140725237	140725533	(40812726)	+	AluSx	SINE/Alu	1	295	(17)	3243151
1106	17.0	10.6	8.2	chr5	140725534	140725681	(40812578)	+	AluJr	SINE/Alu	134	302	(10)	3243150
1210	30.3	11.1	6.2	chr5	143080138	143081332	(38456927)	C	L2a	LINE/L2	(0)	3426	2146	3247144
1260	21.2	4.2	8.6	chr5	144212789	144213232	(37325027)	C	L1MC5	LINE/L1	(12)	9292	8869	3248943
35	19.3	3.8	3.6	chr5	144213317	144213422	(37324837)	+	(CTTT)n	Simple_repeat	1	110	(0)	3248944
281	29.6	6.5	11.0	chr5	144213423	144213650	(37324609)	C	L1MC5	LINE/L1	(446)	8858	8642	3248943
5862	25.2	8.2	6.3	chr5	144852982	144855860	(36682399)	C	L1MD2	LINE/L1	(851)	5686	2750	3249858
205	25.4	24.4	1.6	chr5	146605057	146605263	(34932996)	C	MIR	SINE/MIR	(1)	261	1	3252857
545	30.0	9.1	6.1	chr5	146947193	146947522	(34590737)	+	MLT1K	LTR/ERVL-MaLR	4	344	(251)	3253454
475	23.4	5.5	6.1	chr5	149168854	149169017	(32369242)	C	MER5A1	DNA/hAT-Charlie	(0)	166	4	3257137
920	27.1	15.6	4.3	chr5	149169175	149169706	(32368553)	C	MLT1L	LTR/ERVL-MaLR	(7)	603	1	3257138
14	15.9	0.0	0.0	chr5	150052148	150052175	(31486084)	+	GA-rich	Low_complexity	1	28	(0)	3259113
193	27.1	0.0	0.0	chr5	150464787	150464834	(31073425)	+	L2	LINE/L2	1483	1530	(1889)	3260009
225	23.4	8.7	11.3	chr5	154611127	154611232	(26927027)	+	L2a	LINE/L2	3285	3387	(0)	3267596
1904	13.3	0.3	4.4	chr5	156448720	156449053	(25089206)	C	AluSz6	SINE/Alu	(0)	312	1	3270853
252	26.5	8.4	1.0	chr5	159842447	159842545	(21695714)	+	MER2	DNA/TcMar-Tigger	3	109	(227)	3276825
215	24.5	0.0	2.0	chr5	160694711	160694760	(20843499)	C	L2c	LINE/L2	(0)	3387	3339	3278624
2372	15.0	10.0	3.2	chr5	160694875	160695348	(20842911)	C	LTR54	LTR/ERV1	(0)	510	1	3278625
2020	12.8	5.6	2.3	chr5	161143534	161143876	(20394383)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3279295
4920	9.4	4.0	1.6	chr5	161143877	161144614	(20393645)	+	L1PA12	LINE/L1	5404	6159	(9)	3279296
406	29.3	10.7	2.9	chr5	162266529	162266844	(19271415)	C	L1MEj	LINE/L1	(4752)	1744	1227	3280928
1890	24.6	3.2	7.4	chr5	164168463	164169041	(17369218)	C	MLT2B3	LTR/ERVL	(0)	554	1	3283635
721	34.1	9.5	4.2	chr5	164326519	164326878	(17211381)	+	MLT1K	LTR/ERVL-MaLR	12	374	(221)	3283837
5624	12.2	16.1	1.2	chr5	164326879	164327953	(17210306)	C	MER11A	LTR/ERVK	(0)	1266	1	3283838
347	32.4	8.1	5.5	chr5	167973386	167973731	(13564528)	C	L2c	LINE/L2	(5)	3382	3027	3289164
282	13.8	1.6	1.4	chr5	167973981	167974481	(13563778)	+	GA-rich	Low_complexity	1	509	(0)	3289165
332	33.3	1.4	1.4	chr5	168331060	168331269	(13206990)	+	L1ME4b	LINE/L1	446	655	(237)	3289801
282	20.0	8.5	0.0	chr5	168331416	168331490	(13206769)	+	MER102b	DNA/hAT-Charlie	258	339	(2)	3289802
212	26.8	15.5	10.0	chr5	170121299	170121468	(11416791)	+	MIRb	SINE/MIR	19	199	(69)	3293014
1300	25.5	8.9	1.4	chr5	170121476	170121912	(11416347)	+	MER113	DNA/hAT-Charlie	5	477	(44)	3293015
23141	11.3	1.5	2.5	chr5	171097655	171104023	(10434236)	C	L1PA7	LINE/L1	(18)	6451	44	3294706
1864	22.0	5.9	1.4	chr5	171676834	171677271	(9860988)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	9	3295811
4646	16.3	4.6	3.2	chr5	173015288	173015739	(8522520)	+	MER21B	LTR/ERVL	1	465	(403)	3298749
186	29.5	5.2	7.2	chr5	174373904	174373960	(7164299)	C	L2c	LINE/L2	(143)	3244	3189	3301384
13	13.1	2.7	5.3	chr5	174619015	174619051	(6919208)	+	(TTCA)n	Simple_repeat	1	38	(0)	3301857
608	27.2	0.6	3.1	chr5	174619098	174619260	(6918999)	C	MIR	SINE/MIR	(48)	214	56	3301858
744	22.4	26.2	1.5	chr5	175001040	175001368	(6536891)	C	MLT1J1	LTR/ERVL-MaLR	(0)	448	36	3302620
7422	17.1	10.3	1.6	chr5	176473904	176474606	(5063653)	C	L1MC3	LINE/L1	(897)	6888	6097	3305346
527	24.6	2.7	2.7	chr5	176474610	176474755	(5063504)	+	L2a	LINE/L2	3029	3174	(252)	3305339
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2044	13.8	12.7	0.8	chr5	180507677	180508049	(1030210)	C	MSTA	LTR/ERVL-MaLR	(4)	424	1	3312803
504	30.3	7.0	5.2	chr5	180923213	180923923	(614336)	+	L1M5	LINE/L1	3713	4437	(1709)	3313435
2989	27.2	4.0	1.5	chr5	180924375	180926021	(612238)	+	L1M3b	LINE/L1	2033	3399	(4166)	3313436
635	26.2	0.6	3.0	chr5	181152815	181152983	(385276)	+	MLT1F2	LTR/ERVL-MaLR	396	560	(0)	3313735
7864	19.5	5.2	4.3	chr6	412464	414463	(170391516)	C	LTR49-int	LTR/ERV1	(0)	6331	4314	3314779
1435	6.0	2.6	0.0	chr6	2913021	2913205	(167892774)	C	L1PA4	LINE/L1	(1)	6154	5965	3318100
477	32.2	6.5	3.6	chr6	3542846	3543174	(167262805)	C	MamRep137	DNA/TcMar-Tigger	(2)	508	170	3319059
14028	12.6	4.5	1.0	chr6	4525424	4527694	(166278285)	+	L1M1	LINE/L1	1361	3714	(3851)	3320599
1280	29.2	7.6	2.5	chr6	4741336	4741809	(166064170)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	11	3320985
4043	20.3	11.9	2.1	chr6	5056173	5057248	(165748731)	C	Charlie1a	DNA/hAT-Charlie	(271)	1184	2	3321440
2301	8.9	1.3	0.7	chr6	5057435	5057736	(165748243)	+	AluSx1	SINE/Alu	1	304	(8)	3321441
1952	10.8	4.4	1.7	chr6	5057765	5058051	(165747928)	C	AluJr	SINE/Alu	(17)	295	1	3321442
17	0.0	0.0	0.0	chr6	6131763	6131781	(164674198)	+	(T)n	Simple_repeat	1	19	(0)	3323016
454	32.6	5.7	4.8	chr6	10116005	10116267	(160689712)	C	MIRb	SINE/MIR	(5)	263	14	3328969
5694	10.2	3.7	0.7	chr6	12155252	12156615	(158649364)	C	L1PA11	LINE/L1	(1)	6173	4768	3332251
23	15.4	2.7	6.6	chr6	13184550	13184623	(157621356)	+	(TCCTCT)n	Simple_repeat	1	76	(0)	3333833
339	31.8	6.7	1.9	chr6	16025633	16025789	(154780190)	+	MIR3	SINE/MIR	39	203	(5)	3338865
1822	15.2	0.0	2.1	chr6	16920350	16920631	(153885348)	+	AluJo	SINE/Alu	5	280	(32)	3340258
1394	30.9	9.8	7.4	chr6	18289901	18290629	(152515350)	+	LTR78	LTR/ERV1	7	778	(526)	3342792
31	0.0	0.0	0.0	chr6	19452911	19452944	(151353035)	+	(A)n	Simple_repeat	1	34	(0)	3344453
430	30.7	8.4	1.4	chr6	21341341	21341561	(149464418)	+	MIRc	SINE/MIR	11	248	(20)	3347499
486	32.6	11.1	6.1	chr6	22053368	22053710	(148752269)	C	L2c	LINE/L2	(6)	3381	3020	3348774
17	15.8	0.0	2.7	chr6	22053854	22053890	(148752089)	+	(GTG)n	Simple_repeat	1	37	(0)	3348775
1537	25.7	5.2	5.7	chr6	24860205	24860785	(145945194)	+	L1MC5a	LINE/L1	2184	2761	(16)	3352677
21	18.4	0.0	2.0	chr6	27251567	27251617	(143554362)	+	G-rich	Low_complexity	1	51	(0)	3356580
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
237	25.4	0.0	0.0	chr6	27252310	27252368	(143553611)	+	L2a	LINE/L2	3367	3425	(1)	3356578
667	2.8	0.0	0.0	chr6	27519529	27519600	(143286379)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	3357033
206	33.9	0.0	0.0	chr6	28281276	28281337	(142524642)	+	L2a	LINE/L2	3245	3306	(81)	3358393
2395	13.8	0.0	0.0	chr6	28701612	28701923	(142104056)	C	AluSx1	SINE/Alu	(0)	312	1	3359048
668	1.3	0.0	0.0	chr6	28881388	28881462	(141924517)	+	tRNA-Arg-CGG	tRNA	1	75	(1)	3359379
221	35.9	1.9	0.0	chr6	28881562	28881664	(141924315)	C	L2c	LINE/L2	(6)	3381	3277	3359380
3391	14.6	1.2	1.3	chr6	29563101	29563674	(141242305)	C	LTR10A	LTR/ERV1	(65)	544	1	3360252
16	15.9	0.0	0.0	chr6	30160926	30160953	(140645026)	+	(CA)n	Simple_repeat	1	28	(0)	3361173
550	32.0	18.3	2.1	chr6	30541842	30543199	(140262780)	+	L2c	LINE/L2	1599	3246	(129)	3361778
275	34.3	6.7	0.6	chr6	31076712	31076922	(139729057)	C	L4_A_Mam	LINE/RTE-X	(1486)	3455	3234	3362762
1791	25.7	10.0	2.2	chr6	31266933	31268071	(139537908)	+	L2a	LINE/L2	2179	3420	(6)	3363112
3554	26.2	5.0	7.6	chr6	31466237	31467707	(139338272)	C	ERV3-16A3_I-int	LTR/ERVL	(2816)	2410	989	3363358
1956	14.1	8.5	2.9	chr6	31467708	31468050	(139337929)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3363362
3554	26.2	5.0	7.6	chr6	31468051	31468201	(139337778)	C	ERV3-16A3_I-int	LTR/ERVL	(4238)	988	832	3363358
526	37.6	7.1	1.0	chr6	31603444	31603827	(139202152)	+	L2a	LINE/L2	2268	2676	(743)	3363587
223	20.4	3.6	3.6	chr6	31604193	31604248	(139201731)	C	L2a	LINE/L2	(0)	3426	3371	3363596
14	24.0	3.9	0.0	chr6	31604250	31604266	(139201713)	+	(TTTC)n	Simple_repeat	1	19	(0)	3363597
1839	11.3	0.0	0.0	chr6	31604267	31604505	(139201474)	C	AluSz6	SINE/Alu	(73)	239	1	3363598
14	18.3	2.7	0.0	chr6	31691735	31691771	(139114208)	+	G-rich	Low_complexity	1	38	(0)	3363724
2137	13.6	0.0	0.7	chr6	32997410	32997719	(137808260)	C	AluSx3	SINE/Alu	(3)	308	1	3365724
3233	26.5	9.0	7.9	chr6	32997720	32997883	(137808096)	C	L1MC5a	LINE/L1	(1566)	1211	1038	3365723
15	24.9	2.2	10.2	chr6	33212137	33212270	(137593709)	+	(TCCTTT)n	Simple_repeat	1	137	(0)	3365984
2373	15.5	12.2	0.8	chr6	34630815	34631329	(136174650)	C	L1MC1	LINE/L1	(5323)	1185	610	3368779
2258	12.5	0.0	0.3	chr6	34631332	34631628	(136174351)	C	AluSz	SINE/Alu	(16)	296	1	3368789
3512	14.1	3.4	5.7	chr6	35131593	35131732	(135674247)	+	L1MC1	LINE/L1	5821	5940	(393)	3369762
903	13.0	0.0	0.0	chr6	35131779	35131901	(135674078)	C	AluSz6	SINE/Alu	(189)	123	1	3369765
207	25.0	19.2	0.0	chr6	35131907	35131986	(135673993)	+	L2c	LINE/L2	2695	2793	(626)	3369760
762	22.2	16.3	0.5	chr6	35238446	35238682	(135567297)	+	MIR	SINE/MIR	3	262	(0)	3369960
913	29.5	8.5	4.1	chr6	35703634	35704124	(135101855)	+	MLT1N2	LTR/ERVL-MaLR	48	562	(0)	3370961
6204	16.0	4.2	4.7	chr6	36080237	36082404	(134723575)	C	L1MB4	LINE/L1	(47)	6133	3981	3371776
2102	14.9	8.0	0.8	chr6	36082405	36082797	(134723182)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	3371778
6204	16.7	3.1	6.3	chr6	36082798	36082834	(134723145)	C	L1MB4	LINE/L1	(2166)	3980	3943	3371776
1064	24.9	12.4	4.8	chr6	36262538	36263018	(134542961)	C	L1ME4b	LINE/L1	(54)	838	316	3372111
2902	1.0	0.0	0.0	chr6	37327197	37327506	(133478473)	+	AluYj4	SINE/Alu	1	310	(1)	3374491
18096	25.1	3.4	2.1	chr6	39994399	39999033	(130806946)	C	HERV3-int	LTR/ERV1	(3833)	4593	1	3378878
2592	11.3	6.5	1.2	chr6	39999036	39999455	(130806524)	C	HERV1_LTRe	LTR/ERV1	(1)	536	93	3378878
2117	14.1	4.0	13.7	chr6	40376832	40377307	(130428672)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3379354
3847	19.8	3.3	5.6	chr6	40377308	40377464	(130428515)	+	L1MB5	LINE/L1	6024	6174	(0)	3379352
15	26.3	3.9	0.0	chr6	40998311	40998329	(129807650)	+	GA-rich	Low_complexity	1	52	(0)	3380444
24	6.9	0.0	0.0	chr6	40998330	40998360	(129807619)	+	(A)n	Simple_repeat	1	31	(0)	3380445
220	33.0	14.0	1.7	chr6	44192670	44192906	(126613073)	+	L2b	LINE/L2	3057	3327	(48)	3386739
493	25.3	8.4	3.9	chr6	44459023	44459203	(126346776)	+	MLT1O	LTR/ERVL-MaLR	142	331	(211)	3387217
2107	12.8	0.3	0.3	chr6	44459319	44459614	(126346365)	C	AluSq	SINE/Alu	(17)	296	1	3387218
373	25.1	5.0	1.9	chr6	44470188	44470333	(126335646)	+	MamRep38	DNA/hAT	87	263	(32)	3387246
397	30.8	13.6	0.6	chr6	45088454	45088613	(125717366)	C	MIRb	SINE/MIR	(47)	221	38	3388136
14	14.3	0.0	3.0	chr6	45797215	45797247	(125008732)	+	G-rich	Low_complexity	1	33	(0)	3389185
742	21.2	9.1	0.0	chr6	45963307	45963466	(124842513)	+	MER45A	DNA/hAT-Tip100	3	178	(0)	3389469
2382	12.9	2.3	2.3	chr6	46068565	46068954	(124737025)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3389659
250	31.5	15.8	5.3	chr6	46068955	46069325	(124736654)	C	L2b	LINE/L2	(164)	3211	2796	3389658
543	25.9	2.4	1.7	chr6	47163682	47163860	(123642119)	C	MIR3	SINE/MIR	(6)	202	26	3391338
242	38.5	6.2	1.5	chr6	47343901	47344098	(123461881)	+	L2c	LINE/L2	2913	3120	(267)	3391602
516	23.9	2.9	1.5	chr6	47344110	47344245	(123461734)	+	L2a	LINE/L2	3289	3426	(0)	3391603
553	28.4	7.3	1.4	chr6	49548435	49548641	(121257338)	+	MIR	SINE/MIR	30	249	(13)	3394537
550	26.8	0.0	0.8	chr6	49548703	49548829	(121257150)	C	FLAM_A	SINE/Alu	(13)	129	4	3394538
591	29.7	16.3	3.0	chr6	51764851	51765864	(119040115)	+	L2a	LINE/L2	2168	3426	(0)	3397531
2450	13.6	8.0	0.2	chr6	52946315	52946727	(117859252)	C	MER83	LTR/ERV1	(0)	448	1	3399295
23	14.5	0.0	0.0	chr6	54037418	54037455	(116768524)	+	(TG)n	Simple_repeat	1	38	(0)	3401096
23	17.2	0.0	0.0	chr6	54037455	54037500	(116768479)	+	GA-rich	Low_complexity	1	46	(0)	3401097
2989	15.2	1.2	2.6	chr6	56426352	56427350	(114378629)	+	L1MA4	LINE/L1	4993	5925	(375)	3404160
482	23.0	15.5	1.0	chr6	57199251	57199443	(113606536)	+	LTR16C	LTR/ERVL	206	431	(58)	3405274
2700	16.4	7.2	2.6	chr6	57224776	57225314	(113580665)	+	MER34A	LTR/ERV1	1	566	(5)	3405307
1881	17.2	1.0	0.3	chr6	57312219	57312509	(113493470)	+	AluJb	SINE/Alu	1	293	(19)	3405440
833	26.8	3.9	7.7	chr6	57312544	57312612	(113493367)	C	L1M5	LINE/L1	(981)	5165	5114	3405441
1793	17.1	6.6	1.1	chr6	61197626	61197985	(109607994)	+	THE1B	LTR/ERVL-MaLR	1	381	(0)	3408065
1961	19.1	10.1	2.8	chr6	62834782	62847003	(107958976)	+	SATR1	Satellite	1	14676	(911)	3409737
874	20.7	8.8	0.4	chr6	63635043	63635270	(107170709)	C	Charlie1a	DNA/hAT-Charlie	(171)	1284	1036	3410912
1920	18.6	5.8	7.0	chr6	63716510	63717011	(107088968)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	3	3411019
1924	17.7	4.5	4.1	chr6	65624472	65625019	(105180960)	+	MLT2A2	LTR/ERVL	1	554	(0)	3413346
1205	27.8	3.2	1.2	chr6	65625077	65625415	(105180564)	+	MLT1E2	LTR/ERVL-MaLR	282	627	(0)	3413345
1024	19.1	13.1	8.3	chr6	65870091	65870524	(104935455)	C	MER4CL34	LTR/ERV1	(0)	765	308	3413637
325	18.1	8.6	3.0	chr6	66619381	66619511	(104186468)	+	Charlie5	DNA/hAT-Charlie	2390	2528	(96)	3414516
1701	14.6	8.4	2.2	chr6	66619530	66619886	(104186093)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3414517
1901	15.6	13.1	0.8	chr6	68418838	68419212	(102386767)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3416650
10000	13.4	2.6	0.2	chr6	68419214	68420803	(102385176)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	3416650
14728	14.9	1.5	0.3	chr6	70342843	70347743	(100458236)	C	L1PA15	LINE/L1	(1615)	6526	1565	3419068
2862	7.4	2.9	5.5	chr6	70347748	70348203	(100457776)	+	LTR12B	LTR/ERV1	1	444	(223)	3419071
859	34.6	11.7	5.2	chr6	70385565	70386274	(100419705)	C	L2	LINE/L2	(437)	2982	2235	3419128
2349	11.3	0.0	0.3	chr6	70386275	70386583	(100419396)	+	AluSz	SINE/Alu	1	308	(4)	3419129
13034	13.0	4.4	0.6	chr6	70517768	70519876	(100286103)	+	Tigger1	DNA/TcMar-Tigger	224	2417	(1)	3419322
1558	21.2	14.0	3.7	chr6	71484749	71485164	(99320815)	C	MLT2B1	LTR/ERVL	(51)	469	2	3420634
1796	20.1	2.6	2.1	chr6	71485165	71485342	(99320637)	C	MLT1B	LTR/ERVL-MaLR	(210)	180	1	3420631
224	22.4	0.0	0.0	chr6	73694242	73694290	(97111689)	C	L2a	LINE/L2	(0)	3426	3378	3424082
340	28.2	11.5	0.6	chr6	73694430	73694600	(97111379)	+	L4_C_Mam	LINE/RTE-X	544	735	(4403)	3424083
378	34.4	4.7	2.4	chr6	73829172	73829338	(96976641)	C	MER5A	DNA/hAT-Charlie	(2)	187	17	3424298
1011	23.7	13.5	6.6	chr6	73829580	73830003	(96975976)	+	MLT1J	LTR/ERVL-MaLR	1	458	(54)	3424299
274	33.3	4.8	0.0	chr6	75317801	75317899	(95488080)	+	MamRep605	LTR?	665	768	(81)	3426030
254	37.4	8.4	2.0	chr6	76552190	76552489	(94253490)	+	L3	LINE/CR1	2810	3130	(969)	3427794
236	25.8	1.5	1.5	chr6	76552510	76552576	(94253403)	+	CR1-3_Croc	LINE/CR1	2156	2222	(1383)	3427795
236	35.1	3.5	0.9	chr6	76552585	76552696	(94253283)	+	L3	LINE/CR1	3248	3362	(737)	3427794
911	10.4	0.8	0.0	chr6	77227088	77227212	(93578767)	C	THE1C	LTR/ERVL-MaLR	(0)	364	239	3428555
939	12.1	0.8	0.0	chr6	77227213	77227344	(93578635)	C	THE1C	LTR/ERVL-MaLR	(242)	133	1	3428555
557	28.2	4.0	4.3	chr6	77675175	77675452	(93130527)	C	L1ME3D	LINE/L1	(786)	5360	5084	3429107
29	0.0	0.0	0.0	chr6	78463466	78463490	(92342489)	+	(TG)n	Simple_repeat	1	25	(0)	3430007
2639	4.8	0.0	0.0	chr6	78463814	78464106	(92341873)	+	AluY	SINE/Alu	3	295	(16)	3430008
496	29.0	13.3	7.0	chr6	82721778	82722177	(88083802)	+	L2c	LINE/L2	2959	3387	(0)	3435532
5771	12.3	4.1	1.1	chr6	85510786	85511769	(85294210)	C	L1MC1	LINE/L1	(1354)	4967	3953	3439152
3902	18.1	5.1	6.5	chr6	85511745	85512339	(85293640)	C	L1MC1	LINE/L1	(5601)	907	340	3439152
382	28.1	14.5	3.5	chr6	87194229	87194646	(83611333)	+	L1M5	LINE/L1	3012	3462	(2684)	3441202
329	23.1	0.0	9.9	chr6	89413397	89413497	(81392482)	C	L2c	LINE/L2	(15)	3372	3282	3444716
13	23.9	3.1	4.5	chr6	89433119	89433182	(81372797)	+	G-rich	Low_complexity	1	66	(0)	3444762
256	31.8	7.3	2.3	chr6	90029248	90029376	(80776603)	+	MIRb	SINE/MIR	63	198	(70)	3445807
788	24.9	10.2	3.1	chr6	90029375	90029664	(80776315)	+	L2a	LINE/L2	3093	3405	(21)	3445808
6375	15.7	3.5	0.3	chr6	91841625	91842833	(78963146)	C	L1PB4	LINE/L1	(818)	5328	4080	3448187
264	35.3	7.4	8.0	chr6	91842858	91843183	(78962796)	C	L2c	LINE/L2	(154)	3233	2910	3448186
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
799	32.0	10.8	4.9	chr6	97860736	97861306	(72944673)	+	L2b	LINE/L2	1906	2514	(905)	3455575
270	25.4	0.0	0.0	chr6	98489728	98489790	(72316189)	+	LTR50	LTR/ERVL	1	63	(732)	3456299
543	32.9	7.1	9.4	chr6	98489880	98490200	(72315779)	C	L2b	LINE/L2	(42)	3345	3053	3456300
732	6.2	45.9	3.6	chr6	99394273	99394485	(71411494)	C	AluSx	SINE/Alu	(9)	303	1	3457559
30	29.6	0.0	0.0	chr6	101402225	101402310	(69403669)	+	(CA)n	Simple_repeat	1	86	(0)	3460234
16993	18.1	2.2	1.6	chr6	104380891	104387205	(66418774)	+	L1PA17	LINE/L1	279	6494	(375)	3463894
441	29.3	3.9	0.0	chr6	105042277	105042399	(65763580)	+	Charlie10a	DNA/hAT-Charlie	34	161	(119)	3464849
15973	12.6	3.4	1.5	chr6	105409970	105412809	(65393170)	+	L1M1	LINE/L1	1271	4170	(3395)	3465386
241	28.4	1.5	0.0	chr6	106061683	106061749	(64744230)	C	MIRc	SINE/MIR	(132)	136	69	3466337
237	24.8	6.8	2.2	chr6	106061958	106062106	(64743873)	+	L1ME3G	LINE/L1	192	348	(576)	3466338
196	25.8	11.4	0.0	chr6	107459778	107459839	(63346140)	+	L2b	LINE/L2	3279	3348	(27)	3468895
204	27.0	21.9	0.0	chr6	108700274	108700373	(62105606)	C	MIR3	SINE/MIR	(21)	187	60	3470999
539	30.6	6.0	1.1	chr6	109912917	109913136	(60892843)	C	MIR	SINE/MIR	(10)	252	25	3472849
448	30.2	14.8	3.2	chr6	112645431	112645831	(58160148)	+	MLT1H2	LTR/ERVL-MaLR	15	523	(26)	3477372
793	34.2	7.4	0.8	chr6	112961016	112961380	(57844599)	+	L3	LINE/CR1	3563	3953	(146)	3477788
323	24.4	7.5	4.3	chr6	112961424	112961564	(57844415)	+	MIR	SINE/MIR	73	218	(44)	3477789
1919	14.9	12.2	1.3	chr6	112961577	112961957	(57844022)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3477790
832	36.6	3.1	1.4	chr6	113129634	113130134	(57675845)	C	L2c	LINE/L2	(340)	3079	2570	3478011
582	30.0	13.3	1.1	chr6	116759655	116760167	(54045812)	+	L2a	LINE/L2	2817	3424	(2)	3483053
5741	22.9	8.7	6.7	chr6	117282626	117283625	(53522354)	C	ERV3-16A3_I-int	LTR/ERVL	(3715)	1511	408	3483684
190	32.7	1.0	4.7	chr6	117703738	117703843	(53102136)	C	L2c	LINE/L2	(8)	3379	3278	3484244
2750	28.4	3.3	7.2	chr6	117839616	117841436	(52964543)	+	L1M3b	LINE/L1	6	1634	(4647)	3484393
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
959	32.8	6.3	5.6	chr6	119570569	119571359	(51234620)	+	L1MDa	LINE/L1	49	845	(5788)	3486747
6073	17.5	1.5	1.4	chr6	119971275	119972667	(50833312)	+	L1MC1	LINE/L1	4922	6327	(6)	3487250
513	37.5	20.8	2.2	chr6	122373615	122374596	(48431383)	+	L2c	LINE/L2	2253	3425	(1)	3490326
14393	12.9	1.9	2.2	chr6	122573552	122575918	(48230061)	+	L1PB2	LINE/L1	4512	6866	(1)	3490580
3763	4.7	0.2	0.7	chr6	122845118	122845567	(47960412)	+	LTR7	LTR/ERV1	1	448	(2)	3490949
1028	29.1	6.4	2.2	chr6	122845570	122845970	(47960009)	C	L2a	LINE/L2	(558)	2861	2443	3490948
1906	22.5	10.2	2.1	chr6	123019687	123020163	(47785816)	C	MLT2B1	LTR/ERVL	(0)	520	1	3491160
341	33.3	11.6	0.9	chr6	124734304	124734518	(46071461)	+	L2	LINE/L2	2700	2940	(479)	3493345
212	26.4	11.4	6.1	chr6	125486652	125486671	(45319308)	C	L2c	LINE/L2	(297)	3090	3075	3494398
2625	11.1	0.8	0.8	chr6	125486672	125487026	(45318953)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3494399
293	29.4	12.3	5.6	chr6	125487027	125487288	(45318691)	C	L2c	LINE/L2	(343)	3076	2791	3494398
4825	26.7	7.3	5.3	chr6	126045350	126046927	(44759052)	+	HERVL40-int	LTR/ERVL	1	1612	(3918)	3495184
408	36.6	12.4	2.9	chr6	127212404	127213347	(43592632)	+	L2	LINE/L2	1116	2162	(1257)	3496572
2093	12.6	0.0	1.1	chr6	127213376	127213661	(43592318)	C	AluSq2	SINE/Alu	(30)	283	1	3496574
191	38.5	8.5	1.2	chr6	128981011	128981260	(41824719)	+	L2c	LINE/L2	2480	2749	(670)	3498880
243	37.3	12.3	3.9	chr6	130553835	130554398	(40251581)	C	L2b	LINE/L2	(436)	2983	2366	3501059
255	38.9	0.0	4.4	chr6	132483835	132483947	(38322032)	+	Tigger19b	DNA/TcMar-Tigger	305	412	(138)	3503884
1126	26.5	4.3	1.8	chr6	133575593	133576010	(37229969)	+	L1MDa	LINE/L1	3741	4205	(2332)	3505411
1889	14.0	7.9	1.7	chr6	133576011	133576367	(37229612)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3505416
748	27.8	12.5	4.2	chr6	133576368	133576395	(37229584)	+	L1MDa	LINE/L1	4206	4229	(2308)	3505411
187	33.7	7.7	4.0	chr6	133769773	133769948	(37036031)	+	MIR3	SINE/MIR	19	201	(7)	3505681
2279	12.7	6.9	1.4	chr6	134108477	134108820	(36697159)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3506190
391	31.4	7.6	2.8	chr6	136063425	136063637	(34742342)	+	L2b	LINE/L2	2649	2872	(547)	3509316
433	27.2	9.5	8.1	chr6	136417502	136417749	(34388230)	C	MIRc	SINE/MIR	(6)	262	11	3509853
111	0.0	0.9	0.9	chr6	136641991	136642095	(34163884)	+	(AAAAT)n	Simple_repeat	1	106	(0)	3510219
2199	10.8	8.0	2.0	chr6	137292692	137293033	(33512946)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3511267
1756	13.5	2.4	5.8	chr6	137293034	137293103	(33512876)	C	Tigger4b	DNA/TcMar-Tigger	(150)	211	151	3511266
3567	19.7	4.8	3.4	chr6	138016101	138016903	(32789076)	C	L1MC3	LINE/L1	(722)	7063	6249	3512345
1932	15.8	0.7	1.0	chr6	138470290	138470586	(32335393)	C	AluJb	SINE/Alu	(12)	300	5	3513012
2081	14.3	0.3	1.7	chr6	139239497	139239796	(31566183)	C	AluJb	SINE/Alu	(16)	296	1	3514318
18	17.8	0.0	0.0	chr6	139239830	139239867	(31566112)	+	(TCTC)n	Simple_repeat	1	38	(0)	3514319
15	5.6	0.0	0.0	chr6	139239867	139239885	(31566094)	+	(CA)n	Simple_repeat	1	19	(0)	3514320
1578	10.4	3.0	1.3	chr6	139280424	139280654	(31525325)	+	AluSx	SINE/Alu	60	294	(18)	3514394
1773	23.1	1.5	6.7	chr6	142636340	142637033	(28168946)	C	MLT1A-int	LTR/ERVL-MaLR	(461)	1028	239	3518770
1205	20.9	1.1	0.0	chr6	142637030	142637288	(28168691)	C	MLT2B4	LTR/ERVL	(294)	262	1	3518765
1801	22.6	7.3	1.9	chr6	143460938	143461366	(27344613)	C	LTR16B	LTR/ERVL	(0)	463	10	3519915
1991	11.8	5.6	0.0	chr6	144450847	144451134	(26354845)	+	AluSx1	SINE/Alu	1	305	(7)	3521449
855	28.7	9.4	4.4	chr6	144967818	144968222	(25837757)	+	MLT1J2	LTR/ERVL-MaLR	2	428	(20)	3522128
869	30.9	5.1	1.6	chr6	145746144	145746446	(25059533)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	98	3523135
1702	17.3	5.3	1.1	chr6	146494715	146495077	(24310902)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	3524104
231	31.9	7.8	5.6	chr6	147228026	147228277	(23577702)	C	HAL1	LINE/L1	(626)	1881	1624	3525122
4549	25.2	9.3	3.9	chr6	148723110	148724897	(22081082)	+	L1M4a1	LINE/L1	66	1960	(619)	3527350
260	36.1	2.7	1.8	chr6	149352786	149352895	(21453084)	C	MER5A	DNA/hAT-Charlie	(64)	125	15	3528308
210	27.4	2.5	15.5	chr6	149353065	149353245	(21452734)	C	MER5A	DNA/hAT-Charlie	(3)	186	30	3528309
708	26.8	3.6	6.3	chr6	151936569	151936823	(18869156)	+	L1MEc	LINE/L1	22	269	(6131)	3532835
2205	10.9	0.0	0.3	chr6	154486465	154486793	(16319186)	C	AluSx	SINE/Alu	(0)	312	1	3536478
1693	12.3	0.0	13.7	chr6	154486794	154486970	(16319009)	C	AluSz	SINE/Alu	(179)	133	1	3536477
771	6.7	0.0	0.0	chr6	154487005	154487094	(16318885)	C	AluSc	SINE/Alu	(104)	205	116	3536479
293	33.5	7.3	2.1	chr6	157358825	157359059	(13446920)	+	L2	LINE/L2	2060	2307	(1112)	3540776
682	21.0	17.0	4.3	chr6	158704127	158704286	(12101693)	+	MER58B	DNA/hAT-Charlie	85	269	(72)	3542981
1669	14.1	9.1	5.6	chr6	163939069	163939428	(6866551)	C	THE1D	LTR/ERVL-MaLR	(0)	381	8	3550140
726	32.5	5.7	3.5	chr6	164594833	164595228	(6210751)	C	LTR33	LTR/ERVL	(58)	457	53	3550948
10577	19.6	4.5	5.7	chr6	164983393	164985613	(5820366)	C	L1MC3	LINE/L1	(343)	7860	5673	3551417
247	29.1	11.7	6.2	chr6	165174228	165174388	(5631591)	C	MLT1L	LTR/ERVL-MaLR	(14)	596	426	3551645
440	19.8	1.9	1.0	chr6	165174497	165174598	(5631381)	+	L1M4	LINE/L1	17	119	(7398)	3551646
6200	20.8	4.5	0.9	chr6	165174586	165176559	(5629420)	+	L1M4	LINE/L1	987	3105	(3539)	3551646
623	30.7	4.6	2.6	chr6	165405517	165405750	(5400229)	C	MIRb	SINE/MIR	(21)	247	9	3551898
14	17.6	1.7	8.2	chr6	169794619	169794678	(1011301)	+	G-rich	Low_complexity	1	61	(0)	3556862
255	33.0	14.8	0.0	chr7	2518493	2518607	(156827366)	C	L2a	LINE/L2	(3)	3423	3289	3561572
18	7.8	0.0	0.0	chr7	2518686	2518712	(156827261)	+	(GGT)n	Simple_repeat	1	27	(0)	3561573
228	29.2	10.1	0.0	chr7	3348023	3348135	(155997838)	+	MIRc	SINE/MIR	44	173	(95)	3563170
517	28.2	4.3	0.0	chr7	3348188	3348343	(155997630)	+	MIR	SINE/MIR	43	205	(57)	3563171
2374	11.9	0.6	0.8	chr7	4295164	4295519	(155050454)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3564527
884	12.4	0.0	5.8	chr7	10226660	10226796	(149119177)	+	FLAM_C	SINE/Alu	5	133	(10)	3574713
3684	8.5	1.5	0.2	chr7	10535991	10536508	(148809465)	+	L1PA8A	LINE/L1	5921	6445	(1)	3575030
22962	11.1	2.2	3.2	chr7	13668088	13674469	(145671504)	C	L1PA7	LINE/L1	(16)	6453	13	3579030
351	36.5	8.7	3.3	chr7	14212434	14212889	(145133084)	+	L2	LINE/L2	2138	2620	(799)	3579751
964	24.7	9.1	4.7	chr7	16402676	16403211	(142942762)	+	L1MEd	LINE/L1	981	1542	(5544)	3582411
1755	16.0	3.5	2.6	chr7	18720672	18720978	(140624995)	C	AluJo	SINE/Alu	(2)	310	1	3585700
2291	11.6	4.7	2.0	chr7	19872842	19873194	(139472779)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	3587019
287	30.3	8.1	8.4	chr7	19873195	19873433	(139472540)	+	MLT1K	LTR/ERVL-MaLR	349	591	(4)	3587018
23	10.0	2.1	4.1	chr7	21029290	21029337	(138316636)	+	A-rich	Low_complexity	1	49	(0)	3588622
6756	21.6	3.9	3.0	chr7	23569224	23570308	(135775665)	C	L1M1	LINE/L1	(4346)	3219	2097	3592621
2411	10.3	1.4	0.0	chr7	23570309	23570599	(135775374)	C	AluSg	SINE/Alu	(14)	296	2	3592629
6756	21.6	3.9	3.0	chr7	23570600	23571127	(135774846)	C	L1M1	LINE/L1	(5469)	2096	1592	3592621
272	27.7	10.8	6.9	chr7	26350083	26350241	(132995732)	+	MamTip2	DNA/hAT-Tip100	87	252	(53)	3596917
13	9.3	0.0	0.0	chr7	27180440	27180462	(132165511)	+	(ACAA)n	Simple_repeat	1	23	(0)	3598089
2593	22.5	10.2	5.7	chr7	27814318	27814743	(131531230)	C	L1ME1	LINE/L1	(1433)	4713	4264	3599084
488	23.7	1.5	1.5	chr7	30353678	30353814	(128992159)	+	MER104	DNA/TcMar-Tc2	40	176	(5)	3603021
355	25.9	12.3	4.7	chr7	31686828	31686977	(127658996)	+	MIR	SINE/MIR	8	170	(92)	3605046
1016	29.0	10.2	3.5	chr7	32144107	32144643	(127201330)	C	MLT1K	LTR/ERVL-MaLR	(12)	583	7	3605702
565	33.9	0.6	0.6	chr7	35317584	35317749	(124028224)	C	MIRb	SINE/MIR	(94)	174	9	3610474
515	29.9	10.1	7.5	chr7	35317790	35318241	(124027732)	+	MLT1J	LTR/ERVL-MaLR	1	465	(47)	3610475
741	31.8	3.9	4.8	chr7	35620152	35620587	(123725386)	+	MLT1M	LTR/ERVL-MaLR	35	466	(206)	3610963
547	12.3	0.0	6.2	chr7	36493745	36493861	(122852112)	C	L1MC1	LINE/L1	(105)	6228	6140	3612392
2113	14.8	10.2	0.9	chr7	36493841	36494303	(122851670)	C	L1ME4b	LINE/L1	(5054)	1454	944	3612393
231	22.3	9.6	4.1	chr7	37449543	37449640	(121896333)	C	UCON47	Unknown	(11)	154	51	3613764
918	18.1	5.7	14.1	chr7	37449868	37450194	(121895779)	+	MER33	DNA/hAT-Charlie	27	324	(0)	3613765
442	34.5	4.6	2.3	chr7	41196251	41196464	(118149509)	C	ERVL-E-int	LTR/ERVL	(4939)	728	510	3619493
2295	15.5	6.3	0.0	chr7	44175281	44175679	(115170294)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3623917
229	30.5	0.0	0.0	chr7	44474413	44474471	(114871502)	+	MIR3	SINE/MIR	83	141	(67)	3624239
2892	22.5	2.7	3.2	chr7	45204492	45205363	(114140610)	C	L1M4b	LINE/L1	(3739)	3128	2262	3625650
281	23.7	14.3	0.9	chr7	47862454	47862568	(111483405)	C	L2a	LINE/L2	(24)	3402	3270	3629171
812	33.4	9.4	2.1	chr7	47862751	47863712	(111482261)	C	L2a	LINE/L2	(424)	2995	1956	3629171
204	31.0	9.9	2.0	chr7	48360756	48360857	(110985116)	C	L2a	LINE/L2	(4)	3422	3312	3629820
1391	16.5	0.5	0.5	chr7	48360897	48361120	(110984853)	+	AluJr	SINE/Alu	84	307	(5)	3629821
4500	20.4	4.2	1.5	chr7	49095537	49096477	(110249496)	+	L1M1	LINE/L1	18	985	(6580)	3630699
203	24.7	11.0	5.2	chr7	49706676	49706752	(109639221)	C	MIR3	SINE/MIR	(18)	190	109	3631463
252	35.0	3.3	4.1	chr7	54897854	54898097	(104447876)	C	L2	LINE/L2	(559)	2860	2619	3637952
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
671	27.0	9.5	10.8	chr7	63028191	63028651	(96317322)	C	LTR16B2	LTR/ERVL	(4)	458	5	3643916
13	20.4	0.0	2.8	chr7	65509965	65510000	(93835973)	+	(GCG)n	Simple_repeat	1	36	(0)	3647931
2584	29.5	10.2	7.2	chr7	69490154	69490714	(89855259)	+	L4_C_Mam	LINE/RTE-X	3637	4233	(905)	3656801
239	23.4	2.1	0.0	chr7	71165251	71165297	(88180676)	+	MIRc	SINE/MIR	33	80	(188)	3659629
2392	13.0	2.8	3.8	chr7	71165312	71165679	(88180294)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3659630
1779	19.5	1.0	0.0	chr7	71749883	71750189	(87595784)	C	AluJr	SINE/Alu	(2)	310	1	3660864
956	15.5	2.2	7.2	chr7	71750190	71750249	(87595724)	+	MER5A	DNA/hAT-Charlie	134	189	(0)	3660862
2690	14.7	2.1	1.6	chr7	72349654	72350202	(86995771)	C	L1PREC2	LINE/L1	(725)	5440	4893	3662134
2224	11.9	0.7	0.0	chr7	74396518	74396819	(84949154)	C	AluSz	SINE/Alu	(7)	305	2	3666976
2324	11.4	0.0	0.3	chr7	74574807	74575113	(84770860)	+	AluSq2	SINE/Alu	1	306	(7)	3667432
1104	25.1	19.1	1.1	chr7	74575199	74575893	(84770080)	C	L2b	LINE/L2	(230)	3145	2300	3667433
478	34.2	3.1	0.0	chr7	75105739	75105957	(84240016)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	186	3668811
1243	28.5	11.5	6.7	chr7	77393974	77394450	(81951523)	+	L2a	LINE/L2	2609	3140	(286)	3673689
239	30.1	2.4	0.0	chr7	77394459	77394541	(81951432)	+	LTR16E2	LTR/ERVL	484	568	(0)	3673691
430	38.4	10.2	0.4	chr7	77394688	77394925	(81951048)	C	LTR16E2	LTR/ERVL	(213)	355	92	3673692
1713	15.6	4.2	2.9	chr7	80282882	80283257	(79062716)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3677967
7725	12.7	4.4	0.2	chr7	80283258	80284432	(79061541)	+	THE1D-int	LTR/ERVL-MaLR	1	1227	(404)	3677967
2078	14.8	11.7	0.8	chr7	80399076	80399456	(78946517)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3678137
1765	17.3	4.5	3.8	chr7	81338638	81339009	(78006964)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3679403
245	34.6	6.1	6.7	chr7	81396895	81397225	(77948748)	+	MamGypLTR3a	LTR/Gypsy	264	592	(389)	3679476
15	28.4	1.4	4.0	chr7	84334794	84334866	(75011107)	+	(CCCCTG)n	Simple_repeat	1	74	(0)	3683422
2088	17.2	5.3	3.5	chr7	85942927	85943330	(73402643)	+	MER47B	DNA/TcMar-Tigger	7	418	(0)	3685394
4051	14.2	2.6	3.7	chr7	85944127	85944892	(73401081)	C	L1MA3	LINE/L1	(10)	7714	6957	3685397
387	27.4	5.2	5.2	chr7	87033119	87033272	(72312701)	+	MIRb	SINE/MIR	3	156	(52)	3686694
932	30.4	15.3	1.2	chr7	87084646	87085058	(72260915)	+	LTR81C	LTR/Gypsy	556	1037	(116)	3686758
203	22.2	15.9	3.2	chr7	92179326	92179418	(67166555)	C	MER5B	DNA/hAT-Charlie	(13)	165	59	3693494
549	16.5	0.0	0.0	chr7	93393698	93393782	(65952191)	+	AluJb	SINE/Alu	21	105	(207)	3695168
50	0.0	0.0	0.0	chr7	93393797	93393839	(65952134)	+	(TG)n	Simple_repeat	1	43	(0)	3695169
440	31.6	5.5	0.0	chr7	93945649	93945787	(65400186)	C	MER117	DNA/hAT-Charlie	(48)	149	3	3695929
17	16.1	0.0	0.0	chr7	96786296	96786324	(62559649)	+	(GT)n	Simple_repeat	1	29	(0)	3699856
13	4.7	4.5	0.0	chr7	96786453	96786474	(62559499)	+	(CTC)n	Simple_repeat	1	23	(0)	3699857
27	6.1	0.0	0.0	chr7	96786704	96786738	(62559235)	+	(TTCTCT)n	Simple_repeat	1	35	(0)	3699858
6047	11.9	3.2	1.7	chr7	97709032	97710046	(61635927)	+	L1PA6	LINE/L1	1392	2422	(4441)	3701189
4400	8.7	0.0	0.0	chr7	97710044	97710650	(61635323)	C	L1PA6	LINE/L1	(3026)	3836	3230	3701189
290	28.3	21.9	0.0	chr7	98521105	98521291	(60824682)	+	MIRb	SINE/MIR	3	245	(23)	3702798
342	26.4	11.3	3.9	chr7	98521455	98521584	(60824389)	+	MIR3	SINE/MIR	36	176	(32)	3702799
27	33.0	2.5	0.8	chr7	98521998	98522115	(60823858)	+	(GT)n	Simple_repeat	1	121	(0)	3702800
2197	8.6	4.1	0.0	chr7	98534841	98535119	(60810854)	C	AluSx1	SINE/Alu	(21)	291	1	3702832
930	19.6	0.0	1.2	chr7	98535127	98535289	(60810684)	C	AluJr	SINE/Alu	(20)	292	132	3702833
1769	29.5	6.0	2.0	chr7	98535322	98535909	(60810064)	C	L2a	LINE/L2	(648)	2771	2159	3702829
696	18.1	2.3	0.8	chr7	98889050	98889176	(60456797)	C	FLAM_C	SINE/Alu	(10)	133	5	3703655
321	30.2	10.1	3.5	chr7	98889177	98889329	(60456644)	+	MIRb	SINE/MIR	94	258	(10)	3703654
295	26.2	3.7	6.0	chr7	98889321	98889445	(60456528)	C	MIR	SINE/MIR	(0)	262	145	3703656
1732	15.8	1.0	5.7	chr7	98889539	98889854	(60456119)	C	AluJo	SINE/Alu	(11)	301	1	3703657
453	31.5	6.3	4.5	chr7	100004433	100004647	(59341326)	C	MIRc	SINE/MIR	(27)	241	19	3705656
2374	9.9	0.6	0.3	chr7	100004854	100005165	(59340808)	+	AluSq2	SINE/Alu	1	313	(0)	3705657
236	33.9	15.3	1.3	chr7	104810171	104810472	(54535501)	C	L2c	LINE/L2	(452)	2967	2616	3714629
290	25.3	7.1	3.7	chr7	104810620	104810701	(54535272)	C	MER94	DNA/hAT-Blackjack	(0)	134	50	3714630
214	26.1	0.0	4.2	chr7	104810733	104810804	(54535169)	C	L2c	LINE/L2	(955)	2464	2396	3714629
358	30.8	12.4	7.7	chr7	105219221	105219403	(54126570)	+	HAL1	LINE/L1	490	682	(1825)	3715344
1976	10.4	0.4	0.8	chr7	106107914	106108181	(53237792)	+	AluSz	SINE/Alu	2	268	(44)	3717112
227	27.6	0.0	8.7	chr7	106108184	106108310	(53237663)	C	L1MEi	LINE/L1	(1415)	797	682	3717113
429	18.1	5.7	0.0	chr7	106108311	106108393	(53237580)	+	Charlie1a	DNA/hAT-Charlie	565	652	(803)	3717114
263	34.4	7.5	7.5	chr7	106108439	106108639	(53237334)	C	L1MEi	LINE/L1	(1629)	583	383	3717113
526	24.6	8.8	2.1	chr7	106760587	106760777	(52585196)	+	MER63A	DNA/hAT-Blackjack	6	210	(0)	3718021
579	31.4	12.3	2.5	chr7	107680978	107681378	(51664595)	C	Tigger15a	DNA/TcMar-Tigger	(253)	462	17	3719441
20771	16.1	2.2	1.9	chr7	109453051	109456627	(49889346)	C	L1M1	LINE/L1	(3963)	3602	14	3721818
363	33.2	13.7	2.9	chr7	110843515	110844091	(48501882)	C	L2a	LINE/L2	(2)	3424	2785	3723532
224	28.4	2.2	11.1	chr7	110844149	110844247	(48501726)	C	L2c	LINE/L2	(4)	3383	3294	3723533
735	22.5	10.3	1.9	chr7	112437432	112437644	(46908329)	C	MIR	SINE/MIR	(27)	235	3	3725807
194	35.7	7.5	6.2	chr7	112437932	112438155	(46907818)	C	L2c	LINE/L2	(862)	2557	2331	3725803
1866	15.1	4.5	3.2	chr7	113699158	113699533	(45646440)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3727443
341	33.6	7.0	3.0	chr7	114988624	114988924	(44357049)	C	L2	LINE/L2	(866)	2553	2240	3729122
1770	20.2	7.3	0.5	chr7	115078818	115079186	(44266787)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3729230
426	32.6	11.5	7.4	chr7	118034305	118034751	(41311222)	C	L2c	LINE/L2	(0)	3387	2920	3733359
355	31.6	19.8	2.0	chr7	118034774	118034976	(41310997)	C	MIRb	SINE/MIR	(8)	260	13	3733360
321	39.1	3.8	0.7	chr7	118035011	118035162	(41310811)	C	L2c	LINE/L2	(556)	2863	2707	3733359
5908	14.9	1.5	2.9	chr7	119909892	119911728	(39434245)	C	L1PA13	LINE/L1	(3)	6160	4354	3735711
721	33.6	7.7	4.9	chr7	121280492	121281321	(38064652)	+	L5	LINE/RTE-X	1256	2110	(155)	3737474
251	38.2	1.9	1.9	chr7	121638172	121638275	(37707698)	+	L2b	LINE/L2	3272	3375	(0)	3737992
3859	21.7	5.5	1.9	chr7	121787362	121788210	(37557763)	C	MER110-int	LTR/ERV1	(3613)	1034	153	3738193
329	30.1	8.4	3.3	chr7	124988279	124988491	(34357482)	C	L2a	LINE/L2	(19)	3407	3183	3742565
908	29.1	17.9	0.1	chr7	127047968	127048541	(32297432)	C	L2a	LINE/L2	(0)	3426	2718	3745214
405	20.6	6.7	1.0	chr7	128020446	128020543	(31325430)	+	MIR3	SINE/MIR	66	169	(39)	3746514
260	31.2	6.8	0.0	chr7	131618530	131618625	(27727348)	+	L2b	LINE/L2	3069	3171	(204)	3753157
1234	10.8	2.5	2.0	chr7	134099034	134099231	(25246742)	+	MLT1C	LTR/ERVL-MaLR	1	199	(268)	3756939
559	21.8	6.3	6.8	chr7	134099316	134099522	(25246451)	+	MER39	LTR/ERV1	288	493	(214)	3756940
2312	12.6	3.9	0.3	chr7	135162419	135162769	(24183204)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3758529
2342	7.0	0.0	3.7	chr7	135680163	135680462	(23665511)	C	AluSg	SINE/Alu	(21)	289	1	3759400
2391	8.9	0.3	0.3	chr7	135680687	135680989	(23664984)	+	AluSx	SINE/Alu	1	303	(9)	3759401
13674	17.6	7.2	1.8	chr7	136767312	136769872	(22576101)	+	L1MA2	LINE/L1	18	2728	(4837)	3761055
267	18.6	0.0	0.0	chr7	137976402	137976444	(21369529)	+	MER5B	DNA/hAT-Charlie	1	43	(135)	3762684
2256	8.9	0.7	2.6	chr7	139160434	139160735	(20185238)	C	AluSc	SINE/Alu	(13)	296	1	3765023
387	18.6	9.5	11.4	chr7	139160736	139160875	(20185098)	+	MIRc	SINE/MIR	100	236	(32)	3765024
1769	15.8	1.0	2.4	chr7	139354860	139355156	(19990817)	C	AluJb	SINE/Alu	(15)	297	5	3765416
595	29.1	10.1	5.6	chr7	139355231	139355850	(19990123)	+	L1MEd	LINE/L1	592	1234	(5852)	3765414
2088	14.2	0.0	1.3	chr7	139646219	139646528	(19699445)	+	AluJb	SINE/Alu	6	311	(1)	3765975
2331	10.8	0.0	1.0	chr7	141526764	141527068	(17818905)	C	AluSx3	SINE/Alu	(9)	302	1	3769434
16	23.4	1.4	5.4	chr7	141527069	141527084	(17818889)	+	(TCCTCT)n	Simple_repeat	6	21	(0)	3769435
269	31.9	12.5	4.1	chr7	141527179	141527639	(17818334)	+	L2b	LINE/L2	2666	3175	(200)	3769436
258	35.3	15.6	2.8	chr7	141756162	141756339	(17589634)	+	MamRTE1	LINE/RTE-BovB	3116	3320	(492)	3769776
1137	32.5	3.3	4.4	chr7	141838474	141838991	(17506982)	+	LTR33	LTR/ERVL	2	513	(2)	3769887
5801	21.5	1.8	0.2	chr7	141876503	141877655	(17468318)	C	L1PA13	LINE/L1	(5604)	1181	10	3769924
4218	16.7	2.1	2.5	chr7	143111577	143112306	(16233667)	+	LTR8A	LTR/ERV1	1	727	(0)	3771402
2431	10.8	3.3	0.6	chr7	145003621	145003974	(14341999)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3774042
1739	25.0	6.5	3.9	chr7	145003975	145004053	(14341920)	C	L1ME1	LINE/L1	(131)	6048	5973	3774041
2120	13.5	6.8	0.8	chr7	145004054	145004411	(14341562)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3774043
3827	15.7	5.8	5.4	chr7	145687135	145687838	(13658135)	+	MER61-int	LTR/ERV1	2	703	(4514)	3774955
2665	8.8	0.6	0.0	chr7	145687839	145688191	(13657782)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3774956
3827	15.7	5.8	5.4	chr7	145688192	145688297	(13657676)	+	MER61-int	LTR/ERV1	704	814	(4403)	3774955
335	27.4	10.5	5.3	chr7	148118789	148119031	(11226942)	C	LTR86A1	LTR/ERVL	(37)	476	220	3778241
296	23.3	3.5	0.0	chr7	149203280	149203353	(10142620)	+	MIRb	SINE/MIR	1	87	(181)	3780279
1745	16.9	1.0	3.4	chr7	149203354	149203648	(10142325)	C	AluJr	SINE/Alu	(16)	296	9	3780280
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
2011	26.0	10.7	3.0	chr7	149478271	149479383	(9866590)	+	L1MEd	LINE/L1	304	1508	(5595)	3780755
1697	18.2	10.3	3.4	chr7	150848496	150848909	(8497064)	+	MLT1C	LTR/ERVL-MaLR	6	451	(16)	3782552
188	31.9	12.2	4.4	chr7	152858599	152858870	(6487103)	C	L2	LINE/L2	(2330)	1089	794	3786103
409	31.9	0.6	8.4	chr7	152858961	152859138	(6486835)	C	MIRb	SINE/MIR	(21)	247	84	3786104
413	29.6	4.7	3.0	chr7	153300733	153300899	(6045074)	+	MamGypLTR1c	LTR/Gypsy	599	768	(35)	3786767
1861	14.4	6.8	3.0	chr7	154215038	154215403	(5130570)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3787975
404	29.7	4.8	1.9	chr7	154215623	154215783	(5130190)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	3787976
7428	14.5	3.2	1.5	chr7	154463507	154464550	(4881423)	C	L1MA3	LINE/L1	(6492)	1073	2	3788302
746	27.1	15.5	2.2	chr7	156670429	156671157	(2674816)	+	L1MEd	LINE/L1	1170	2013	(5090)	3791206
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1813	22.3	0.8	0.3	chr8	1645173	1645536	(143493100)	+	MER47A	DNA/TcMar-Tigger	1	366	(0)	3795917
1791	16.2	4.8	3.2	chr8	4027318	4027686	(141110950)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3798856
155	11.7	1.0	4.8	chr8	17199466	17199749	(127938887)	+	(CTT)n	Simple_repeat	1	274	(0)	3817858
212	33.8	5.8	8.1	chr8	17724621	17724868	(127413768)	+	L2b	LINE/L2	2163	2404	(1015)	3818618
681	17.3	4.8	11.8	chr8	21171579	21171781	(123966855)	+	MER53	DNA/hAT	5	192	(1)	3824003
581	30.4	15.1	5.7	chr8	21172151	21172575	(123966061)	C	LTR78B	LTR/ERV1	(823)	473	2	3824001
318	29.7	7.8	0.0	chr8	25069085	25069202	(120069434)	C	MIRb	SINE/MIR	(22)	246	119	3830429
16	16.6	0.0	2.8	chr8	25069420	25069455	(120069181)	+	(TTA)n	Simple_repeat	1	36	(0)	3830430
262	31.2	0.0	1.3	chr8	28973224	28973301	(116165335)	C	MIRb	SINE/MIR	(128)	140	64	3837173
991	25.1	10.2	14.9	chr8	31225718	31226055	(113912581)	C	HAL1	LINE/L1	(134)	2373	2003	3841257
305	30.3	8.4	10.2	chr8	31276153	31276358	(113862278)	+	HAL1	LINE/L1	278	479	(2028)	3841333
2087	15.1	2.4	1.9	chr8	31604385	31604755	(113533881)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3841752
13	22.2	6.8	1.6	chr8	35235335	35235393	(109903243)	+	(CCCAGC)n	Simple_repeat	1	63	(0)	3847278
3221	9.4	15.8	4.0	chr8	36168575	36169038	(108969598)	+	MER51A	LTR/ERV1	1	553	(81)	3848504
2009	13.4	1.4	0.0	chr8	36169039	36169329	(108969307)	C	AluSp	SINE/Alu	(14)	299	5	3848505
199	37.6	3.6	8.8	chr8	36809076	36809279	(108329357)	C	MamTip2	DNA/hAT-Tip100	(111)	194	2	3849432
183	17.9	4.9	0.0	chr8	37135698	37135736	(108002900)	C	OldhAT1	DNA/hAT-Ac	(232)	2616	2576	3849882
42	0.0	0.0	0.0	chr8	37135937	37135972	(108002664)	+	(AC)n	Simple_repeat	1	36	(0)	3849883
18	32.6	1.1	4.2	chr8	37179806	37179900	(107958736)	+	(CTCCCCC)n	Simple_repeat	1	96	(0)	3849946
41	8.0	0.0	0.0	chr8	37179921	37179973	(107958663)	+	(CT)n	Simple_repeat	1	53	(0)	3849947
354	35.9	4.1	0.0	chr8	40660416	40660532	(104478104)	+	L2a	LINE/L2	3299	3420	(6)	3855708
19	0.0	0.0	0.0	chr8	41303053	41303073	(103835563)	+	(A)n	Simple_repeat	1	21	(0)	3856770
192	32.4	0.0	4.0	chr8	41865383	41865456	(103273180)	+	L2b	LINE/L2	3305	3375	(0)	3857743
212	25.6	10.9	2.4	chr8	42920495	42920578	(102218058)	C	L2a	LINE/L2	(19)	3407	3316	3859754
380	21.3	2.7	4.7	chr8	42920721	42920850	(102217786)	+	MIRb	SINE/MIR	57	184	(46)	3859755
6430	18.7	4.7	2.6	chr8	47495933	47496810	(97641826)	C	L1MB7	LINE/L1	(1744)	4402	3509	3862003
375	25.8	4.9	0.0	chr8	48125845	48125941	(97012695)	C	L1MA4	LINE/L1	(115)	6185	6084	3862992
383	26.0	11.3	2.8	chr8	48805507	48805684	(96332952)	+	L1MDa	LINE/L1	587	781	(5759)	3863700
5854	16.3	3.2	0.8	chr8	48805730	48806410	(96332226)	C	L1MC1	LINE/L1	(1)	6332	5631	3863701
381	28.9	7.1	1.4	chr8	48970364	48970517	(96168119)	C	MIRb	SINE/MIR	(40)	228	59	3863887
1006	33.9	1.6	3.5	chr8	50632996	50633509	(94505127)	+	HERVL40-int	LTR/ERVL	17	520	(5010)	3865861
15	13.3	3.0	0.0	chr8	53129794	53129853	(92008783)	+	(TTTTAA)n	Simple_repeat	1	61	(0)	3869130
8823	20.2	11.2	2.0	chr8	54598114	54599462	(90539174)	C	L1MDa	LINE/L1	(4091)	2542	1120	3871330
18	4.8	0.0	0.0	chr8	55002098	55002119	(90136517)	+	(A)n	Simple_repeat	1	22	(0)	3871859
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
3888	14.2	4.5	5.0	chr8	57400612	57401306	(87737330)	+	LTR8	LTR/ERV1	1	691	(0)	3875246
1654	19.0	2.6	2.9	chr8	58440983	58441293	(86697343)	C	AluJr	SINE/Alu	(2)	310	1	3876590
36	1.8	6.5	3.0	chr8	64363674	64363758	(80774878)	+	(GAGAA)n	Simple_repeat	1	87	(0)	3884363
253	26.4	0.0	0.0	chr8	64863239	64863291	(80275345)	+	Charlie4z	DNA/hAT-Charlie	1	53	(114)	3885042
392	31.4	4.8	0.7	chr8	67765444	67765584	(77373052)	C	MIRb	SINE/MIR	(120)	148	2	3889770
289	31.2	8.6	2.9	chr8	67765613	67765853	(77372783)	+	L2c	LINE/L2	2031	2286	(1133)	3889771
521	29.4	7.1	9.8	chr8	67765850	67766155	(77372481)	+	L2c	LINE/L2	3074	3370	(17)	3889771
549	27.0	12.9	3.8	chr8	68569239	68569527	(76569109)	C	MLT2F	LTR/ERVL	(45)	618	300	3890865
450	32.6	7.6	1.8	chr8	72923892	72924113	(72214523)	C	MIRc	SINE/MIR	(18)	250	15	3897091
938	17.5	3.6	0.0	chr8	72924398	72924557	(72214079)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3897092
2074	14.6	2.5	1.1	chr8	78839123	78839481	(66299155)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3905167
31	18.7	5.0	0.0	chr8	78839545	78839624	(66299012)	+	(CCTT)n	Simple_repeat	1	84	(0)	3905168
312	33.5	7.4	9.4	chr8	78839700	78839976	(66298660)	+	MLT1I	LTR/ERVL-MaLR	128	398	(13)	3905169
21269	15.8	8.6	0.8	chr8	78874062	78877135	(66261501)	C	L1PA8A	LINE/L1	(2467)	5098	450	3905209
2726	5.5	0.0	0.0	chr8	80136243	80136551	(65002085)	+	AluY	SINE/Alu	1	309	(2)	3907086
13	14.4	10.9	0.0	chr8	82739071	82739116	(62399520)	+	(TAACTATA)n	Simple_repeat	1	51	(0)	3911026
18	4.7	0.0	0.0	chr8	82739123	82739144	(62399492)	+	(A)n	Simple_repeat	1	22	(0)	3911027
1452	22.8	0.7	2.1	chr8	82739292	82739576	(62399060)	+	AluJb	SINE/Alu	2	282	(30)	3911028
31	5.6	0.0	0.0	chr8	82739579	82739616	(62399020)	+	(ATC)n	Simple_repeat	1	38	(0)	3911029
27	20.0	1.3	4.0	chr8	85177479	85177553	(59961083)	+	(GCC)n	Simple_repeat	1	76	(0)	3914155
1468	20.1	1.1	1.7	chr8	88838947	88839234	(56299402)	C	MLT1B	LTR/ERVL-MaLR	(104)	286	1	3919105
3247	25.2	4.9	4.5	chr8	88839252	88839374	(56299262)	+	MLT1F-int	LTR/ERVL-MaLR	1	134	(1355)	3919106
2231	14.4	3.0	1.9	chr8	88839375	88839734	(56298902)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3919107
3247	25.2	4.9	4.5	chr8	88839735	88840185	(56298451)	+	MLT1F-int	LTR/ERVL-MaLR	135	586	(903)	3919106
11014	9.5	3.7	1.1	chr8	89352660	89354197	(55784439)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3919712
2008	12.6	7.5	2.1	chr8	89354202	89354541	(55784095)	C	THE1B	LTR/ERVL-MaLR	(4)	360	1	3919712
1268	19.3	4.1	3.7	chr8	90188724	90188967	(54949669)	+	AluJr	SINE/Alu	11	255	(57)	3920858
449	26.0	11.4	1.8	chr8	90189049	90189220	(54949416)	+	MIRc	SINE/MIR	58	243	(19)	3920859
440	29.5	4.7	0.0	chr8	90638878	90638999	(54499637)	+	L2a	LINE/L2	3295	3422	(4)	3921459
4488	13.0	3.0	0.3	chr8	91088693	91089417	(54049219)	C	L1PA17	LINE/L1	(2)	6164	5420	3922046
457	24.3	11.5	0.1	chr8	91415353	91415537	(53723099)	+	LTR40c	LTR/ERVL	152	370	(95)	3922505
13	10.8	6.7	0.0	chr8	94072248	94072277	(51066359)	+	(CCTC)n	Simple_repeat	1	32	(0)	3926281
355	25.2	2.2	16.1	chr8	95193000	95193160	(49945476)	+	LTR78B	LTR/ERV1	21	158	(1138)	3928374
380	30.5	3.9	8.7	chr8	95193313	95193610	(49945026)	+	LTR78B	LTR/ERV1	498	780	(516)	3928374
922	26.5	9.9	7.4	chr8	95327592	95328080	(49810556)	+	LTR67B	LTR/ERVL	116	618	(2)	3928603
1336	32.4	4.6	3.3	chr8	98540654	98541176	(46597460)	+	LTR67B	LTR/ERVL	12	543	(77)	3933811
2143	14.4	8.9	0.5	chr8	98541177	98541568	(46597068)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3933812
1336	32.4	4.6	3.3	chr8	98541569	98541645	(46596991)	+	LTR67B	LTR/ERVL	544	620	(0)	3933811
421	27.6	6.3	5.6	chr8	98678609	98678877	(46459759)	+	L1ME4a	LINE/L1	5840	6110	(14)	3934014
1197	25.0	23.9	2.7	chr8	98679004	98679687	(46458949)	+	L2a	LINE/L2	2584	3426	(0)	3934015
443	26.6	10.9	3.6	chr8	98737588	98737705	(46400931)	+	L1M5	LINE/L1	4327	4443	(1703)	3934089
2213	12.8	0.0	0.7	chr8	98737706	98738009	(46400627)	C	AluSx1	SINE/Alu	(10)	302	1	3934090
2698	29.4	6.2	1.1	chr8	98769163	98769234	(46369402)	+	ERVL-E-int	LTR/ERVL	5	77	(5590)	3934134
2229	13.5	2.2	1.9	chr8	98769235	98769597	(46369039)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3934135
2698	28.4	7.3	1.9	chr8	98769598	98770731	(46367905)	+	ERVL-E-int	LTR/ERVL	78	1297	(4370)	3934134
2668	5.5	0.0	0.0	chr8	99582646	99582954	(45555682)	C	AluY	SINE/Alu	(2)	309	1	3935407
471	28.7	10.5	8.3	chr8	99582955	99583199	(45555437)	C	HAL1	LINE/L1	(471)	2036	1830	3935406
797	25.6	3.2	0.8	chr8	99985087	99985326	(45153310)	+	MIR	SINE/MIR	2	247	(15)	3935987
392	28.7	14.1	5.8	chr8	99985381	99985657	(45152979)	+	L2c	LINE/L2	3084	3387	(0)	3935988
948	22.8	1.4	1.4	chr8	101283346	101283567	(43855069)	C	MIR	SINE/MIR	(21)	241	20	3938478
1592	19.0	12.2	1.9	chr8	101283644	101284061	(43854575)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3938479
1618	19.5	10.0	1.5	chr8	103111094	103111488	(42027148)	+	MLT1C	LTR/ERVL-MaLR	2	433	(34)	3941766
8489	18.5	3.8	0.8	chr8	103672755	103674349	(41464287)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	7	3942627
223	28.6	0.0	0.0	chr8	109533431	109533479	(35605157)	+	MIR	SINE/MIR	212	260	(2)	3950973
375	30.2	6.0	2.8	chr8	109533482	109533658	(35604978)	+	MLT1J	LTR/ERVL-MaLR	69	251	(261)	3950974
440	31.7	11.2	2.0	chr8	109643687	109643911	(35494725)	C	MIRc	SINE/MIR	(17)	251	6	3951137
690	23.1	0.6	6.5	chr8	111639772	111639957	(33498679)	C	AluJo	SINE/Alu	(17)	295	121	3953769
199	29.5	9.9	3.4	chr8	113383079	113383257	(31755379)	C	L2c	LINE/L2	(280)	3107	2916	3956063
7485	21.8	8.0	0.9	chr8	113485599	113487618	(31651018)	C	L1M1	LINE/L1	(5383)	2182	14	3956208
22850	8.7	1.1	0.3	chr8	115227696	115230558	(29908078)	+	L1PA7	LINE/L1	3274	6153	(1)	3958407
290	39.2	2.7	2.7	chr8	117285385	117285531	(27853105)	+	L2b	LINE/L2	3225	3371	(4)	3961399
262	31.7	3.5	12.1	chr8	117285575	117285764	(27852872)	C	L2b	LINE/L2	(4)	3383	3211	3961400
443	36.6	7.1	2.2	chr8	117285776	117286135	(27852501)	C	L2b	LINE/L2	(784)	2635	2257	3961400
529	29.2	8.4	7.6	chr8	117294148	117294550	(27844086)	C	L2c	LINE/L2	(0)	3387	2986	3961415
254	34.2	9.2	7.3	chr8	117589000	117589371	(27549265)	C	L2c	LINE/L2	(91)	3296	2917	3961838
473	33.3	5.3	0.6	chr8	120560804	120560984	(24577652)	C	MIRb	SINE/MIR	(63)	205	16	3966773
2297	10.6	2.6	0.0	chr8	120561046	120561348	(24577288)	+	AluSz	SINE/Alu	1	311	(1)	3966774
323	21.8	2.9	2.9	chr8	123415261	123415364	(21723272)	C	LTR41B	LTR/ERVL	(654)	104	1	3971814
2484	6.2	0.0	0.0	chr8	123415601	123415892	(21722744)	C	AluSg	SINE/Alu	(18)	292	1	3971817
1230	14.8	6.1	0.9	chr8	123480082	123480299	(21658337)	C	LTR72B	LTR/ERV1	(264)	236	7	3971976
428	28.9	17.3	2.2	chr8	123480340	123480657	(21657979)	C	L2a	LINE/L2	(493)	2926	2551	3971975
355	18.9	8.6	0.0	chr8	124253338	124253411	(20885225)	C	MER81	DNA/hAT-Blackjack	(33)	81	1	3973379
25	23.7	6.7	1.8	chr8	124253475	124253579	(20885057)	+	(CTCCT)n	Simple_repeat	1	112	(0)	3973380
23	15.1	1.5	7.2	chr8	124372428	124372495	(20766141)	+	G-rich	Low_complexity	1	69	(0)	3973578
744	24.2	5.6	3.8	chr8	124442248	124442457	(20696179)	C	MER41D	LTR/ERV1	(307)	214	1	3973726
6635	24.1	3.2	2.8	chr8	124442458	124442727	(20695909)	C	PRIMA41-int	LTR/ERV1	(0)	7756	7495	3973726
4649	9.2	0.8	1.9	chr8	124469208	124469839	(20668797)	C	L1PB1	LINE/L1	(1)	6150	5526	3973772
17	13.1	0.0	0.0	chr8	124671033	124671058	(20467578)	+	(T)n	Simple_repeat	1	26	(0)	3974106
452	34.6	6.4	5.7	chr8	126695457	126696014	(18442622)	+	L2a	LINE/L2	2718	3276	(99)	3978031
7747	6.1	1.0	0.1	chr8	130746492	130747448	(14391188)	+	LTR13A	LTR/ERVK	1	966	(0)	3985690
299	28.5	4.2	1.1	chr8	134293137	134293245	(10845391)	C	MIRb	SINE/MIR	(43)	225	106	3992076
2034	16.2	3.4	4.9	chr8	134293269	134293657	(10844979)	+	MLT1B	LTR/ERVL-MaLR	8	390	(0)	3992077
318	27.6	3.9	0.0	chr8	134396388	134396485	(10742151)	C	MIRc	SINE/MIR	(164)	104	3	3992251
720	31.3	13.4	1.4	chr8	135946841	135947183	(9191453)	C	LTR16A2	LTR/ERVL	(103)	392	6	3994845
1175	30.6	9.2	3.2	chr8	136296242	136297107	(8841529)	+	L2a	LINE/L2	2484	3414	(12)	3995429
3790	15.5	3.2	1.0	chr8	136342076	136342773	(8795863)	C	L1MA4	LINE/L1	(13)	6287	5574	3995506
205	34.7	2.1	0.0	chr8	136474600	136474694	(8663942)	+	MER131	DNA?	26	122	(93)	3995704
2522	12.1	0.0	1.1	chr8	137789462	137789829	(7348807)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3997684
10273	12.2	3.4	0.3	chr8	138016432	138017961	(7120675)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3998036
215	34.9	10.4	1.7	chr8	138363238	138363482	(6775154)	C	MIRb	SINE/MIR	(2)	260	4	3998567
828	24.7	3.1	6.6	chr8	143634783	143634988	(1503648)	+	Charlie2b	DNA/hAT-Charlie	1776	1971	(811)	4006431
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
250	25.6	7.9	0.0	chr8	143997543	143997624	(1141012)	+	L2	LINE/L2	2763	2851	(568)	4006931
866	19.8	4.6	5.8	chr8	144090760	144091000	(1047636)	C	L1M4	LINE/L1	(1202)	4944	4707	4007084
720	14.0	0.0	0.0	chr8	144091001	144091107	(1047529)	C	AluSx	SINE/Alu	(204)	108	2	4007082
426	18.5	11.8	15.6	chr8	144091110	144091182	(1047454)	C	L1M4	LINE/L1	(5678)	1839	1790	4007091
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
5078	21.1	11.7	6.5	chr8	144612869	144614354	(524282)	C	L1MEc	LINE/L1	(4060)	2340	762	4007803
270	34.2	8.9	6.4	chr9	209329	209787	(138184930)	+	L2a	LINE/L2	2913	3425	(1)	4008794
7326	9.4	0.8	0.6	chr9	2372366	2373456	(136021261)	+	L1PREC2	LINE/L1	3739	4832	(1314)	4012026
2654	13.6	9.8	2.7	chr9	6873303	6873903	(131520814)	C	Tigger1	DNA/TcMar-Tigger	(1346)	1072	428	4018922
16	8.1	9.8	0.0	chr9	7242596	7242621	(131152096)	+	(CTTCT)n	Simple_repeat	1	30	(0)	4019446
2399	10.5	0.3	1.0	chr9	7242622	7242935	(131151782)	C	AluSz	SINE/Alu	(0)	312	1	4019447
389	35.5	8.2	4.6	chr9	10879098	10879448	(127515269)	+	LTR88c	LTR/Gypsy?	11	375	(487)	4024356
4529	14.5	2.7	1.2	chr9	12045820	12046627	(126348090)	+	LTR8B	LTR/ERV1	1	820	(0)	4025743
302	28.3	8.8	5.2	chr9	12046628	12046676	(126348041)	+	MIR	SINE/MIR	153	199	(63)	4025742
191	32.4	0.0	2.7	chr9	15337726	15337798	(123056919)	+	L2c	LINE/L2	3278	3348	(39)	4030325
265	28.1	9.9	0.0	chr9	15338093	15338174	(123056543)	+	LTR85a	LTR/Gypsy?	26	116	(586)	4030334
1731	17.4	6.1	0.3	chr9	16185711	16186003	(122208714)	C	AluJr4	SINE/Alu	(1)	311	1	4031587
2951	22.5	11.1	5.5	chr9	19739114	19740665	(118654052)	+	L1ME3A	LINE/L1	4580	6284	(62)	4036818
545	21.1	8.3	5.2	chr9	19740671	19740880	(118653837)	+	L1MC5	LINE/L1	9088	9304	(0)	4036831
187	28.7	1.1	8.4	chr9	20488791	20488885	(117905832)	+	L3	LINE/CR1	2903	2990	(1109)	4037949
19	15.4	0.0	0.0	chr9	22447234	22447269	(115947448)	+	(GCC)n	Simple_repeat	1	36	(0)	4040557
403	35.3	3.1	7.4	chr9	23757340	23757541	(114637176)	+	MIR3	SINE/MIR	8	200	(8)	4042266
1197	23.4	5.4	0.0	chr9	27341881	27342141	(111052576)	+	MER58B	DNA/hAT-Charlie	1	276	(65)	4046987
202	34.3	7.4	2.8	chr9	27432404	27432544	(110962173)	+	L2a	LINE/L2	3274	3421	(5)	4047140
221	28.3	0.0	1.9	chr9	27432627	27432680	(110962037)	C	L3b	LINE/CR1	(9)	5223	5171	4047141
217	20.8	9.4	0.0	chr9	27432640	27432687	(110962030)	C	Tigger19b	DNA/TcMar-Tigger	(196)	354	302	4047142
678	25.7	13.5	0.9	chr9	27583184	27583409	(110811308)	+	MIRb	SINE/MIR	2	267	(1)	4047399
199	17.1	2.4	0.0	chr9	27583410	27583450	(110811267)	+	L2c	LINE/L2	3346	3387	(0)	4047400
312	26.8	3.1	2.0	chr9	27583605	27583733	(110810984)	+	L2c	LINE/L2	3230	3359	(16)	4047397
184	34.3	14.8	4.9	chr9	27868920	27869223	(110525494)	C	L2c	LINE/L2	(0)	3387	3049	4047777
4237	21.9	3.4	2.0	chr9	31938384	31939440	(106455277)	C	Charlie1	DNA/hAT-Charlie	(214)	2567	1496	4053034
1630	27.9	4.4	8.9	chr9	31939561	31939831	(106454886)	C	L1MEf	LINE/L1	(4298)	2739	2461	4053036
767	28.9	2.5	5.0	chr9	33714739	33715059	(104679658)	+	L1MEc	LINE/L1	2545	2857	(3462)	4055857
14	13.7	0.0	5.6	chr9	33715158	33715193	(104679524)	+	(CATATG)n	Simple_repeat	1	36	(0)	4055860
21	3.7	0.0	0.0	chr9	33817729	33817756	(104576961)	+	(CCG)n	Simple_repeat	1	28	(0)	4056034
1280	12.2	5.7	2.7	chr9	38145590	38145733	(100248984)	+	MER30	DNA/hAT-Charlie	1	153	(77)	4064024
8216	16.5	14.8	2.3	chr9	38145734	38147263	(100247454)	+	MER52A	LTR/ERV1	1	1755	(0)	4064025
205	24.0	14.2	6.9	chr9	38975872	38976001	(99418716)	C	MIR3	SINE/MIR	(57)	151	11	4065457
18600	10.6	1.7	6.0	chr9	62840284	62843326	(75551391)	C	L1PBa	LINE/L1	(927)	5198	2140	4073706
16	5.2	0.0	0.0	chr9	64773330	64773349	(73621368)	+	(G)n	Simple_repeat	1	20	(0)	4075707
18	8.5	0.0	0.0	chr9	64773456	64773480	(73621237)	+	(G)n	Simple_repeat	1	25	(0)	4075708
16	9.3	0.0	0.0	chr9	64773777	64773799	(73620918)	+	(G)n	Simple_repeat	1	23	(0)	4075709
569	31.1	10.6	9.3	chr9	66781265	66781750	(71612967)	+	L2a	LINE/L2	2934	3426	(0)	4077823
1035	16.6	5.5	0.5	chr9	68749687	68749892	(69644825)	C	MER20	DNA/hAT-Charlie	(0)	219	3	4080367
878	19.3	3.4	3.9	chr9	68749922	68750126	(69644591)	+	MIR	SINE/MIR	57	260	(2)	4080368
9917	20.8	3.0	4.9	chr9	69782718	69783978	(68610739)	C	L1M4	LINE/L1	(5070)	2447	1249	4082087
1623	22.3	0.7	0.0	chr9	69783979	69784283	(68610434)	C	AluJr	SINE/Alu	(5)	307	1	4082088
9917	20.8	3.0	4.9	chr9	69784284	69784353	(68610364)	C	L1M4	LINE/L1	(6269)	1248	1186	4082087
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
2148	21.7	7.0	0.0	chr9	70983493	70984012	(67410705)	C	MER89	LTR/ERV1	(0)	559	1	4084033
288	32.4	2.2	4.9	chr9	71314894	71315036	(67079681)	+	MIRb	SINE/MIR	4	142	(126)	4084483
7572	23.0	3.7	5.3	chr9	71566355	71568634	(66826083)	+	L1M4a1	LINE/L1	12	2251	(328)	4084842
2691	6.5	0.0	0.7	chr9	74902754	74903060	(63491657)	C	AluY	SINE/Alu	(6)	305	1	4090164
1122	24.8	6.2	7.9	chr9	74903061	74903073	(63491644)	C	L1MC5	LINE/L1	(811)	8493	8489	4090163
630	4.2	0.0	0.0	chr9	74903074	74903145	(63491572)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	4090165
2513	8.4	0.0	6.3	chr9	74903153	74903484	(63491233)	C	AluSc8	SINE/Alu	(0)	311	1	4090166
2457	27.6	9.4	2.8	chr9	74929070	74929924	(63464793)	+	HAL1	LINE/L1	1131	2063	(444)	4090212
6906	12.9	3.9	0.9	chr9	75245273	75246092	(63148625)	C	L1PA15	LINE/L1	(2638)	4128	4041	4090772
1784	17.6	17.5	2.8	chr9	75246093	75246455	(63148262)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4090774
11089	14.1	2.3	0.3	chr9	75246456	75248054	(63146663)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	4090774
688	27.3	12.7	14.0	chr9	76333184	76333677	(62061040)	C	LTR80B	LTR/ERVL	(91)	493	1	4092323
12	18.7	0.0	3.0	chr9	76333835	76333867	(62060850)	+	(TTTA)n	Simple_repeat	1	33	(0)	4092325
1951	14.5	1.4	5.1	chr9	76333930	76334300	(62060417)	C	THE1B	LTR/ERVL-MaLR	(7)	357	1	4092326
1762	8.0	3.6	0.5	chr9	76571733	76572034	(61822683)	+	LSU-rRNA_Hsa	rRNA	4695	5034	(1)	4092814
30	29.6	0.0	0.0	chr9	76572036	76572125	(61822592)	+	A-rich	Low_complexity	1	90	(0)	4092815
1938	13.6	1.0	3.0	chr9	76621685	76621985	(61772732)	C	AluJr	SINE/Alu	(17)	295	1	4092907
917	19.1	0.5	6.9	chr9	76621986	76622115	(61772602)	+	MER5A	DNA/hAT-Charlie	70	189	(0)	4092906
271	19.7	0.3	0.0	chr9	76622150	76622206	(61772511)	C	L2b	LINE/L2	(0)	3387	3328	4092908
211	22.7	2.2	0.0	chr9	76622169	76622212	(61772505)	C	MIRb	SINE/MIR	(15)	253	209	4092909
84	3.7	0.0	0.0	chr9	79107228	79107312	(59287405)	+	(TA)n	Simple_repeat	1	85	(0)	4096730
1055	15.8	0.0	0.0	chr9	79107313	79107458	(59287259)	C	AluSc8	SINE/Alu	(29)	282	137	4096731
1947	14.4	2.0	3.1	chr9	79107459	79107817	(59286900)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4096732
10655	10.5	1.6	0.1	chr9	79107818	79109290	(59285427)	+	THE1A-int	LTR/ERVL-MaLR	1	1496	(84)	4096732
2502	14.4	2.4	2.6	chr9	79218064	79218491	(59176226)	C	MSTC	LTR/ERVL-MaLR	(1)	427	1	4096910
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
72	1.5	0.0	0.0	chr9	79867220	79867285	(58527432)	+	(GT)n	Simple_repeat	1	66	(0)	4097857
1959	13.7	5.8	3.4	chr9	80779198	80779552	(57615165)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4099005
8285	19.8	6.8	2.3	chr9	80779553	80781534	(57613183)	C	L1MDa	LINE/L1	(999)	5538	3450	4099004
758	29.3	6.3	1.7	chr9	81733296	81733597	(56661120)	+	MLT1O	LTR/ERVL-MaLR	80	396	(146)	4100408
40	0.0	0.0	0.0	chr9	83317194	83317227	(55077490)	+	(AC)n	Simple_repeat	1	34	(0)	4102681
11	14.5	7.5	2.3	chr9	83317342	83317381	(55077336)	+	(GACCAA)n	Simple_repeat	1	43	(0)	4102682
351	25.5	0.0	4.8	chr9	83668507	83668609	(54726108)	+	MER5B	DNA/hAT-Charlie	77	174	(4)	4103278
953	23.1	9.1	0.0	chr9	84143641	84143961	(54250756)	+	MLT1G-int	LTR/ERVL-MaLR	1136	1488	(1)	4104143
377	24.5	1.1	4.1	chr9	84144015	84144112	(54250605)	+	MLT1G	LTR/ERVL-MaLR	41	135	(456)	4104143
4786	17.9	2.0	0.9	chr9	84957363	84958270	(53436447)	+	L1MB7	LINE/L1	5250	6169	(15)	4105512
325	25.3	5.1	6.2	chr9	84958331	84958490	(53436227)	C	Mam_R4	LINE/Dong-R4	(21)	3788	3631	4105513
659	27.9	3.1	4.8	chr9	85197978	85198031	(53196686)	+	MIR	SINE/MIR	8	65	(197)	4105867
2160	15.8	4.1	3.1	chr9	85198032	85198090	(53196627)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	324	4105868
2176	11.2	0.0	6.4	chr9	85198091	85198419	(53196298)	C	AluSq2	SINE/Alu	(5)	308	1	4105869
2160	15.8	4.1	3.1	chr9	85198420	85198745	(53195972)	C	MLT1B	LTR/ERVL-MaLR	(67)	323	1	4105868
773	29.8	8.9	3.2	chr9	85929039	85929503	(52465214)	+	HAL1	LINE/L1	107	600	(1907)	4107012
2177	26.7	6.9	0.8	chr9	85929689	85930399	(52464318)	+	HAL1	LINE/L1	658	1414	(1093)	4107012
15	25.0	5.8	1.4	chr9	86826255	86826323	(51568394)	+	GA-rich	Low_complexity	1	73	(0)	4108521
2052	11.6	0.7	5.0	chr9	88279884	88280201	(50114516)	+	AluSx1	SINE/Alu	1	304	(8)	4110819
719	20.6	0.0	0.8	chr9	88280361	88280486	(50114231)	+	FLAM_A	SINE/Alu	1	125	(17)	4110820
156	30.0	3.8	2.0	chr9	88872812	88873041	(49521676)	+	GA-rich	Low_complexity	1	237	(0)	4111837
293	32.6	8.9	5.1	chr9	89841119	89841366	(48553351)	+	L2b	LINE/L2	2984	3234	(141)	4113035
183	33.5	10.3	0.5	chr9	89841454	89841645	(48553072)	+	L2	LINE/L2	1376	1588	(1831)	4113036
938	28.5	12.7	1.1	chr9	89841749	89842117	(48552600)	+	L2	LINE/L2	1630	2047	(1372)	4113036
3108	13.2	0.5	3.6	chr9	90480232	90480348	(47914369)	+	MER61B	LTR/ERV1	1	113	(314)	4113884
1899	16.3	7.4	0.3	chr9	90515042	90515380	(47879337)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	4113943
183	26.5	9.1	0.0	chr9	93909643	93909731	(44484986)	+	L2b	LINE/L2	3058	3160	(227)	4118736
217	29.5	4.9	2.5	chr9	93910058	93910137	(44484580)	C	L2c	LINE/L2	(17)	3370	3289	4118737
1918	21.8	20.6	6.0	chr9	94478595	94479803	(43914914)	C	REP522	Satellite/telo	(339)	1385	1	4119685
1158	14.0	1.0	0.0	chr9	97975443	97975635	(40419082)	C	L1M4	LINE/L1	(397)	5787	5593	4125533
3392	14.8	13.3	6.5	chr9	97975626	97976209	(40418508)	C	L1MB7	LINE/L1	(47)	6137	5564	4125534
569	29.1	8.9	4.9	chr9	98676450	98676841	(39717876)	+	MLT1J	LTR/ERVL-MaLR	99	471	(41)	4126988
386	31.0	12.8	6.2	chr9	99026525	99026961	(39367756)	+	L2c	LINE/L2	2917	3386	(1)	4127715
536	30.0	13.3	1.6	chr9	99534837	99535141	(38859576)	C	L3	LINE/CR1	(977)	3122	2777	4128655
319	33.7	7.9	9.7	chr9	99900539	99900764	(38493953)	C	L2c	LINE/L2	(1)	3386	3157	4129269
2405	10.8	0.8	0.8	chr9	99900765	99901118	(38493599)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	4129270
37	0.0	0.0	0.0	chr9	103035342	103035375	(35359342)	+	(TAA)n	Simple_repeat	1	34	(0)	4133825
2013	13.7	4.5	1.6	chr9	103035634	103036003	(35358714)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4133826
1724	18.4	1.0	1.0	chr9	103084715	103085013	(35309704)	C	AluJo	SINE/Alu	(12)	300	2	4133885
1158	11.9	6.1	0.5	chr9	103085044	103085229	(35309488)	C	MER30	DNA/hAT-Charlie	(0)	230	34	4133886
2315	12.2	2.7	2.2	chr9	105443164	105443525	(32951192)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4137572
778	25.6	1.8	2.7	chr9	107149671	107149895	(31244822)	C	L3	LINE/CR1	(2178)	1921	1699	4140122
613	26.3	2.9	6.8	chr9	108411644	108411892	(29982825)	+	MER121	DNA/hAT?	110	348	(53)	4142691
275	33.1	6.5	1.3	chr9	108412088	108412246	(29982471)	+	Charlie22a	DNA/hAT-Charlie	13	180	(311)	4142692
221	29.4	10.5	3.8	chr9	108901144	108901249	(29493468)	+	L3b	LINE/CR1	5007	5120	(112)	4143470
281	35.9	7.1	3.3	chr9	109603706	109603947	(28790770)	C	LTR78	LTR/ERV1	(772)	532	281	4144828
258	13.2	0.0	0.0	chr9	109603969	109604006	(28790711)	+	tRNA-Phe-TTY	tRNA	1	38	(38)	4144829
230	34.2	5.8	3.4	chr9	109604272	109604389	(28790328)	+	L4_C_Mam	LINE/RTE-X	4021	4141	(997)	4144830
2431	24.0	15.5	2.0	chr9	109623902	109624467	(28770250)	C	L1MC4a	LINE/L1	(140)	7902	7304	4144860
2500	10.9	1.6	1.1	chr9	109624468	109624829	(28769888)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4144861
2431	23.9	17.7	1.9	chr9	109624830	109625326	(28769391)	C	L1MC4a	LINE/L1	(579)	7303	6599	4144860
6369	6.8	0.7	0.0	chr9	111091247	111092086	(27302631)	+	HERVL-int	LTR/ERVL	1	846	(4808)	4147285
2826	7.9	0.0	0.0	chr9	111092106	111092460	(27302257)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4147286
14	16.4	2.9	0.0	chr9	115808724	115808757	(22585960)	+	(TTTTCC)n	Simple_repeat	1	35	(0)	4156212
396	28.7	0.8	0.8	chr9	115808972	115809101	(22585616)	+	L1MC4	LINE/L1	6460	6589	(1453)	4156213
252	32.2	7.5	5.4	chr9	116724508	116724691	(21670026)	+	MIR3	SINE/MIR	17	204	(4)	4157926
448	32.7	9.8	6.7	chr9	117762340	117762745	(20631972)	C	L2c	LINE/L2	(35)	3352	2933	4160061
228	33.5	9.9	2.3	chr9	117762796	117762972	(20631745)	C	L2c	LINE/L2	(557)	2862	2671	4160061
219	23.2	2.8	2.9	chr9	117773475	117774185	(20620532)	+	(TTTC)n	Simple_repeat	1	710	(0)	4160081
379	33.9	12.9	6.6	chr9	117960929	117961260	(20433457)	+	L2c	LINE/L2	3032	3387	(0)	4160388
278	18.5	3.2	7.1	chr9	118247373	118247435	(20147282)	C	L1MB3	LINE/L1	(2)	6181	6121	4160882
2402	12.8	1.4	0.3	chr9	118247436	118247795	(20146922)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4160883
278	18.5	3.2	7.1	chr9	118247796	118247830	(20146887)	C	L1MB3	LINE/L1	(63)	6120	6087	4160882
1341	17.6	1.2	1.4	chr9	118247818	118248091	(20146626)	C	L1MA4	LINE/L1	(109)	6045	5769	4160884
519	34.6	3.1	2.7	chr9	118563024	118563256	(19831461)	C	MIRb	SINE/MIR	(21)	247	10	4161415
800	32.9	7.6	5.2	chr9	119637622	119638254	(18756463)	C	L2a	LINE/L2	(0)	3426	2793	4163401
282	29.9	8.0	1.6	chr9	120358870	120359103	(18035614)	C	L2c	LINE/L2	(124)	3251	2997	4164874
41	7.8	1.4	2.8	chr9	120413804	120413874	(17980843)	+	(GAGGGAG)n	Simple_repeat	1	72	(0)	4164975
492	30.7	6.7	0.7	chr9	121993366	121993519	(16401198)	+	MIR3	SINE/MIR	19	182	(26)	4168091
263	34.3	1.9	6.4	chr9	123698273	123698381	(14696336)	C	MIRb	SINE/MIR	(129)	139	36	4171163
410	30.7	12.6	5.2	chr9	125918673	125918943	(12475774)	C	L4_C_Mam	LINE/RTE-X	(4746)	392	99	4175512
540	26.0	6.2	0.0	chr9	125918955	125919104	(12475613)	C	MIRb	SINE/MIR	(100)	168	9	4175513
218	28.8	14.6	3.5	chr9	127870173	127870200	(10524517)	C	MIRc	SINE/MIR	(77)	191	162	4179212
2132	12.1	1.3	0.3	chr9	127870201	127870498	(10524219)	C	AluSx1	SINE/Alu	(11)	301	1	4179213
15	10.4	0.0	5.7	chr9	129488448	129488482	(8906235)	+	G-rich	Low_complexity	1	35	(0)	4182951
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
311	33.2	12.2	0.3	chr9	130220258	130220568	(8174149)	C	L2b	LINE/L2	(0)	3375	3023	4184590
23	15.3	0.0	0.0	chr9	130220730	130220767	(8173950)	+	(T)n	Simple_repeat	1	38	(0)	4184591
512	28.6	10.8	6.1	chr9	130833988	130834233	(7560484)	+	MIRb	SINE/MIR	4	262	(6)	4185896
2040	9.5	1.1	0.7	chr9	133239368	133239650	(5155067)	+	AluSx1	SINE/Alu	28	311	(1)	4190281
637	29.1	3.3	2.5	chr9	137711308	137711607	(683110)	+	L1MB7	LINE/L1	5689	6007	(235)	4196067
230	28.6	1.0	1.0	chrX	3075929	3076488	(152964407)	+	(CTCT)n	Simple_repeat	3	561	(0)	4364190
1782	17.8	2.2	1.3	chrX	3076763	3077071	(152963824)	+	AluJr	SINE/Alu	1	312	(0)	4364191
2057	12.7	7.1	1.5	chrX	5539172	5539514	(150501381)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4368657
1233	14.7	1.0	0.0	chrX	7890388	7890577	(148150318)	+	AluJb	SINE/Alu	121	312	(0)	4372349
2496	11.2	1.6	0.0	chrX	7890664	7891038	(148149857)	+	L1PA16	LINE/L1	5782	6162	(4)	4372350
421	28.4	13.4	1.2	chrX	12679063	12679226	(143361669)	+	LTR16C	LTR/ERVL	1	187	(302)	4379912
1968	19.0	3.0	2.2	chrX	12679251	12679668	(143361227)	C	MER88	LTR/ERVL	(124)	520	1	4379913
1329	25.1	0.7	0.0	chrX	12679677	12679971	(143360924)	+	LTR16C	LTR/ERVL	193	489	(0)	4379912
182	34.2	4.8	3.6	chrX	13701996	13702244	(142338651)	+	L2	LINE/L2	2817	3068	(351)	4381626
538	32.2	11.9	5.0	chrX	13702338	13702736	(142338159)	C	MamRep137	DNA/TcMar-Tigger	(0)	510	81	4381627
289	19.2	0.0	0.0	chrX	13702860	13702911	(142337984)	+	L2c	LINE/L2	3327	3378	(9)	4381628
292	27.5	10.2	2.0	chrX	14000930	14001081	(142039814)	+	L2	LINE/L2	1956	2121	(1298)	4382123
1494	25.4	5.4	6.7	chrX	14001087	14001527	(142039368)	C	L1MC5a	LINE/L1	(14)	2763	2326	4382124
465	29.1	3.1	7.8	chrX	16504758	16504962	(139535933)	C	MIRc	SINE/MIR	(22)	246	52	4386116
1115	19.1	4.7	5.9	chrX	18120551	18120873	(137920022)	C	MER33	DNA/hAT-Charlie	(0)	324	6	4388928
750	14.6	2.7	0.0	chrX	18121169	18121312	(137919583)	+	MER96B	DNA/hAT-Tip100	29	176	(241)	4388929
457	26.4	11.9	0.0	chrX	19571961	19572153	(136468742)	+	L4_A_Mam	LINE/RTE-X	4673	4891	(99)	4391595
2367	28.3	5.8	2.6	chrX	21584338	21584959	(134455936)	C	L2a	LINE/L2	(0)	3426	2769	4394639
1953	14.9	1.1	0.3	chrX	21584960	21585241	(134455654)	+	AluJb	SINE/Alu	1	284	(28)	4394640
33	7.5	5.4	2.6	chrX	21585247	21585320	(134455575)	+	(AT)n	Simple_repeat	1	78	(0)	4394641
2367	26.1	3.4	4.3	chrX	21585321	21585667	(134455228)	C	L2a	LINE/L2	(651)	2768	2441	4394639
15	10.6	0.0	5.9	chrX	21839743	21839776	(134201119)	+	(GGT)n	Simple_repeat	1	34	(0)	4395016
2117	24.8	6.5	5.2	chrX	24334114	24334838	(131706057)	C	MER21C	LTR/ERVL	(96)	842	14	4399325
8684	16.3	3.0	2.1	chrX	26070096	26072035	(129968860)	C	L1PA11	LINE/L1	(4572)	1911	6	4401930
546	33.9	8.7	4.1	chrX	32307141	32307503	(123733392)	C	LTR16C	LTR/ERVL	(42)	447	67	4411105
328	22.6	7.9	2.1	chrX	33331014	33331108	(122709787)	+	L2c	LINE/L2	3286	3386	(1)	4412502
12	29.1	3.7	0.0	chrX	33878518	33878571	(122162324)	+	A-rich	Low_complexity	1	56	(0)	4413101
2219	12.4	1.7	2.2	chrX	35013521	35014079	(121026816)	+	LTR10E	LTR/ERV1	1	612	(21)	4414544
1172	20.9	2.5	2.1	chrX	35014082	35014320	(121026575)	+	MLT1A0	LTR/ERVL-MaLR	101	340	(25)	4414543
270	26.9	3.5	0.0	chrX	37641323	37641400	(118399495)	C	MIR	SINE/MIR	(119)	149	63	4417690
182	24.4	0.0	6.2	chrX	37728403	37728450	(118312445)	+	AmnSINE1	SINE/5S-Deu-L2	47	91	(484)	4417847
1769	22.2	5.8	1.3	chrX	39818631	39819087	(116221808)	C	LTR16B1	LTR/ERVL	(0)	480	2	4421249
1573	31.9	7.2	0.8	chrX	40755783	40756432	(115284463)	C	L1M3a	LINE/L1	(5255)	700	6	4423036
4601	17.8	6.0	2.8	chrX	40756436	40756822	(115284073)	C	L1M4	LINE/L1	(1096)	5050	4636	4423037
5530	11.9	2.1	1.0	chrX	40790802	40791610	(115249285)	C	LTR1B1	LTR/ERV1	(0)	818	1	4423104
306	34.8	6.2	7.9	chrX	41797132	41797396	(114243499)	+	L2c	LINE/L2	2914	3173	(214)	4425060
2040	12.5	6.9	0.3	chrX	41942663	41943030	(114097865)	+	L1MC2	LINE/L1	5943	6336	(8)	4425287
634	25.9	4.7	1.4	chrX	42216883	42217090	(113823805)	+	MIRb	SINE/MIR	8	222	(46)	4425676
1733	18.7	4.0	1.3	chrX	42879442	42879826	(113161069)	+	L1ME1	LINE/L1	5773	6168	(11)	4426582
560	22.1	0.0	3.5	chrX	44240688	44240828	(111800067)	C	MER5A	DNA/hAT-Charlie	(0)	189	54	4428507
526	18.4	8.8	0.0	chrX	45173064	45173177	(110867718)	C	MLT2F	LTR/ERVL	(0)	663	539	4430437
7569	13.0	1.0	0.0	chrX	45658330	45659484	(110381411)	+	THE1B-int	LTR/ERVL-MaLR	414	1580	(0)	4431044
2133	12.8	5.5	1.4	chrX	45659485	45659833	(110381062)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4431044
5076	8.8	0.0	1.0	chrX	45659834	45660564	(110380331)	+	L1PB1	LINE/L1	5394	6117	(34)	4431046
2145	17.2	2.2	11.2	chrX	46194362	46194905	(109845990)	+	MLT1D	LTR/ERVL-MaLR	2	495	(10)	4431749
2300	15.0	2.1	5.0	chrX	47107970	47108424	(108932471)	+	MLT2D	LTR/ERVL	1	554	(2)	4433395
2213	16.9	3.3	2.2	chrX	47108425	47108871	(108932024)	+	L1MEc	LINE/L1	378	829	(5571)	4433393
241	25.9	10.0	2.4	chrX	48774023	48774033	(107266862)	C	SVA_C	Retroposon/SVA	(1106)	278	190	4436814
399	12.7	0.0	5.6	chrX	48774034	48774104	(107266791)	+	AluJo	SINE/Alu	73	139	(173)	4436815
1446	23.1	4.7	5.7	chrX	48774184	48774429	(107266466)	C	L2a	LINE/L2	(3)	3423	3190	4436816
2198	10.7	0.7	0.0	chrX	48774430	48774720	(107266175)	+	AluSz6	SINE/Alu	1	293	(19)	4436817
14	16.6	2.3	4.4	chrX	49068455	49068498	(106972397)	+	(TTTTCT)n	Simple_repeat	1	45	(0)	4437418
331	29.1	16.1	1.4	chrX	50651259	50651401	(105389494)	C	MIRc	SINE/MIR	(8)	260	93	4439636
728	16.5	3.6	0.0	chrX	50651454	50651586	(105389309)	+	MER5A	DNA/hAT-Charlie	2	139	(50)	4439637
12006	7.2	1.4	0.0	chrX	50651589	50653931	(105386964)	C	L1PA7	LINE/L1	(6)	6148	3784	4439638
2086	25.5	4.1	5.6	chrX	52432660	52433105	(103607790)	C	MER68-int	LTR/ERVL	(2504)	486	47	4441877
3401	19.9	8.8	8.0	chrX	53121310	53122339	(102918556)	C	L1MC3	LINE/L1	(0)	7785	6747	4443086
10723	11.8	2.3	0.3	chrX	57224865	57228660	(98812235)	C	L1PBa1	LINE/L1	(2718)	4144	264	4448887
10429	21.1	3.5	1.5	chrX	57848358	57850655	(98190240)	C	L1M1	LINE/L1	(5209)	2356	12	4449385
4831	14.6	3.9	0.8	chrX	57878789	57880595	(98160300)	+	L1PA16	LINE/L1	4396	6163	(3)	4449396
568	31.5	0.0	1.1	chrX	62829259	62829441	(93211454)	C	L2	LINE/L2	(649)	2770	2590	4449706
249	25.9	10.5	3.4	chrX	62829482	62829569	(93211326)	C	L2-1_AMi	LINE/L2	(694)	541	447	4449707
349	33.0	5.5	1.3	chrX	62829582	62829805	(93211090)	C	L2	LINE/L2	(1045)	2374	2141	4449706
12156	11.7	0.6	1.8	chrX	64524307	64527169	(91513726)	+	L1PA13	LINE/L1	3321	6154	(9)	4451418
549	21.1	0.0	0.0	chrX	64527330	64527424	(91513471)	C	FLAM_C	SINE/Alu	(14)	129	35	4451419
391	18.0	0.0	0.0	chrX	68687413	68687473	(87353422)	C	FAM	SINE/Alu	(100)	85	25	4456801
286	29.2	2.5	6.1	chrX	68687549	68687712	(87353183)	C	MIR3	SINE/MIR	(2)	206	49	4456802
340	35.7	13.5	1.6	chrX	69114173	69114477	(86926418)	+	L3b	LINE/CR1	2548	2894	(1205)	4457577
671	39.4	4.1	1.7	chrX	69114479	69115190	(86925705)	+	CR1-3_Croc	LINE/CR1	1918	2647	(958)	4457580
581	33.7	14.9	0.5	chrX	69967180	69967564	(86073331)	C	L2c	LINE/L2	(642)	2777	2328	4458904
1041	21.5	6.2	6.5	chrX	69967569	69967861	(86073034)	C	MLT1K	LTR/ERVL-MaLR	(8)	587	296	4458912
58	0.0	0.0	0.0	chrX	71230838	71230889	(84810006)	+	(AGGA)n	Simple_repeat	1	52	(0)	4461088
28	10.3	0.0	6.6	chrX	71230890	71230950	(84809945)	+	G-rich	Low_complexity	1	61	(0)	4461089
26	21.9	5.6	3.2	chrX	71304737	71304825	(84736070)	+	(TC)n	Simple_repeat	1	94	(0)	4461229
20	29.5	4.0	5.2	chrX	71304826	71304862	(84736033)	+	(TTTCC)n	Simple_repeat	57	155	(0)	4461228
2504	14.2	4.0	0.0	chrX	72362074	72362482	(83678413)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	4463234
941	25.0	0.4	3.6	chrX	72362483	72362664	(83678231)	+	MIR	SINE/MIR	71	249	(13)	4463233
365	27.2	14.4	3.9	chrX	73943786	73943965	(82096930)	+	MIRc	SINE/MIR	25	226	(42)	4464969
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1171	32.1	7.6	7.6	chrX	75057616	75058455	(80982440)	C	HAL1	LINE/L1	(1666)	841	2	4466384
3956	13.4	3.3	0.0	chrX	75361643	75362255	(80678640)	+	MER41B	LTR/ERV1	1	634	(0)	4466664
4735	13.7	3.5	0.9	chrX	75362256	75363042	(80677853)	+	MER41-int	LTR/ERV1	1	808	(5138)	4466664
11874	16.9	1.3	4.5	chrX	76025843	76028593	(80012302)	+	L1PA8A	LINE/L1	4	2657	(3674)	4467187
325	30.1	6.3	0.0	chrX	76861061	76861260	(79179635)	+	MLT1B-int	LTR/ERVL-MaLR	680	1031	(458)	4467808
2057	21.7	3.5	1.7	chrX	76861383	76861845	(79179050)	+	MLT1B-int	LTR/ERVL-MaLR	950	1651	(0)	4467810
3955	14.3	0.2	0.9	chrX	77292610	77293239	(78747656)	+	L1PA15	LINE/L1	5338	5962	(203)	4468164
13	12.8	5.9	0.0	chrX	77682908	77682941	(78357954)	+	(CTTTTTC)n	Simple_repeat	1	36	(0)	4468659
24732	6.1	0.2	0.2	chrX	78152446	78158029	(77882866)	C	L1PA4	LINE/L1	(3)	6277	126	4469574
20675	12.8	1.9	0.6	chrX	78158057	78160684	(77880211)	+	L1PBa1	LINE/L1	253	2972	(3890)	4469575
4389	21.9	6.5	1.2	chrX	78526210	78527206	(77513689)	+	ERVL-B4-int	LTR/ERVL	1	1053	(4661)	4469900
48	0.0	0.0	0.0	chrX	80022028	80022068	(76018827)	+	(AC)n	Simple_repeat	1	41	(0)	4471378
26	0.0	0.0	0.0	chrX	80022129	80022153	(76018742)	+	(GTTTT)n	Simple_repeat	1	25	(0)	4471379
1866	14.9	11.4	0.6	chrX	82071387	82071736	(73969159)	C	MSTA	LTR/ERVL-MaLR	(35)	393	1	4473525
2082	13.1	1.2	0.9	chrX	82071737	82072082	(73968813)	+	L1PREC2	LINE/L1	4434	4780	(1366)	4473526
5004	20.9	8.8	1.8	chrX	82087296	82088697	(73952198)	+	MER57-int	LTR/ERV1	5	1539	(5666)	4473542
3136	20.2	4.4	8.9	chrX	83478944	83479772	(72561123)	+	L1M4c	LINE/L1	2833	3647	(2729)	4474926
282	18.9	0.0	0.2	chrX	83479781	83479841	(72561054)	C	L1M3	LINE/L1	(2059)	4084	4022	4474930
1682	17.1	4.2	2.6	chrX	83479847	83480152	(72560743)	C	THE1B	LTR/ERVL-MaLR	(2)	362	52	4474931
4470	15.2	1.8	0.6	chrX	83486565	83487656	(72553239)	+	L1MA4	LINE/L1	6331	7437	(282)	4474933
375	16.7	4.5	0.0	chrX	83487664	83487747	(72553148)	+	L1MB3	LINE/L1	6087	6174	(9)	4474938
1330	1.9	0.0	0.0	chrX	83487752	83487905	(72552990)	+	L1PA2	LINE/L1	5997	6150	(5)	4474939
515	29.6	15.2	1.8	chrX	84235915	84236141	(71804754)	+	MIRc	SINE/MIR	2	264	(4)	4475716
1821	18.9	3.2	0.6	chrX	84877945	84878392	(71162503)	C	MER89	LTR/ERV1	(0)	559	1	4476370
216	33.6	12.7	3.5	chrX	84878432	84878573	(71162322)	+	MamTip2	DNA/hAT-Tip100	80	236	(69)	4476371
1927	14.8	7.1	2.9	chrX	85037219	85037566	(71003329)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4476556
3373	12.6	1.1	1.1	chrX	85037567	85038087	(71002808)	+	L1PB	LINE/L1	4731	5252	(894)	4476555
2793	9.9	4.4	0.7	chrX	85277296	85277733	(70763162)	C	L1MA2	LINE/L1	(4)	6300	5846	4476860
2713	8.7	0.0	0.3	chrX	85892298	85892653	(70148242)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4477437
298	32.6	6.7	6.7	chrX	85892955	85893148	(70147747)	+	L2c	LINE/L2	3182	3375	(12)	4477438
529	31.8	1.5	5.8	chrX	86367540	86367746	(69673149)	C	MIR3	SINE/MIR	(0)	208	11	4478000
3447	14.0	2.8	1.9	chrX	88421880	88422475	(67618420)	+	LTR38B	LTR/ERV1	1	602	(8)	4480249
2838	28.1	3.1	3.5	chrX	88582808	88583471	(67457424)	C	L1P4a	LINE/L1	(6201)	948	277	4480448
194	37.5	11.1	0.7	chrX	88583475	88583619	(67457276)	C	MIRb	SINE/MIR	(105)	163	2	4480453
1366	26.8	18.1	1.2	chrX	88922799	88923361	(67117534)	+	L2	LINE/L2	2240	2918	(501)	4480801
2712	10.2	0.6	0.0	chrX	89606555	89606916	(66433979)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4481607
1044	24.3	6.5	4.9	chrX	91279622	91280203	(64760692)	C	LTR25-int	LTR/ERV1	(6490)	601	42	4483348
760	13.2	6.2	2.6	chrX	91361149	91361303	(64679592)	C	MER4-int	LTR/ERV1	(5169)	1429	1269	4483425
440	17.1	0.0	6.7	chrX	91361363	91361471	(64679424)	C	MER4-int	LTR/ERV1	(7237)	1033	950	4483425
301	14.5	47.5	3.1	chrX	91361459	91361571	(64679324)	C	MER4-int	LTR/ERV1	(5912)	686	524	4483425
2110	13.1	1.0	1.3	chrX	91413759	91414064	(64626831)	C	AluSx	SINE/Alu	(7)	305	1	4483472
1043	23.4	4.5	0.9	chrX	91414111	91414343	(64626552)	+	MER57A-int	LTR/ERV1	4611	4852	(1335)	4483468
411	27.1	9.6	6.0	chrX	93408444	93408694	(62632201)	+	MLT1L	LTR/ERVL-MaLR	343	603	(7)	4485595
844	12.2	12.6	0.6	chrX	93408697	93408877	(62632018)	C	L1MA4A	LINE/L1	(117)	6186	5981	4485596
486	14.8	5.3	0.0	chrX	93408878	93408985	(62631910)	+	L1MA4A	LINE/L1	6190	6303	(0)	4485596
2817	3.3	0.0	0.0	chrX	93461932	93462238	(62578657)	+	AluY	SINE/Alu	2	308	(3)	4485645
1801	13.2	6.2	4.8	chrX	93462239	93462489	(62578406)	C	MER61A	LTR/ERV1	(78)	263	2	4485643
1399	16.3	14.8	0.7	chrX	93462499	93462789	(62578106)	C	MSTA	LTR/ERVL-MaLR	(89)	339	1	4485646
237	21.1	5.3	10.1	chrX	93462791	93462869	(62578026)	+	MIRb	SINE/MIR	189	263	(5)	4485647
1473	19.1	11.5	0.9	chrX	94037880	94038212	(62002683)	C	LOR1b	LTR/ERV1	(88)	373	1	4486402
19214	17.9	2.9	1.2	chrX	94122819	94124851	(61916044)	C	L1M1	LINE/L1	(5482)	2083	12	4486532
19734	20.8	3.3	2.3	chrX	95116388	95120667	(60920228)	C	L1PA11	LINE/L1	(2705)	4876	39	4487630
1341	10.2	0.5	4.8	chrX	95587895	95588101	(60452794)	C	Tigger2a	DNA/TcMar-Tigger	(226)	208	11	4488105
21	6.8	0.0	0.0	chrX	95661578	95661608	(60379287)	+	(ATTT)n	Simple_repeat	1	31	(0)	4488190
4190	14.3	2.2	0.3	chrX	95825337	95826032	(60214863)	+	L1MC1	LINE/L1	5320	6029	(304)	4488384
14	13.3	9.5	0.0	chrX	95826081	95826122	(60214773)	+	GA-rich	Low_complexity	1	46	(0)	4488385
219	30.3	4.3	3.3	chrX	95826381	95826472	(60214423)	+	MIRc	SINE/MIR	51	143	(125)	4488386
296	25.9	12.0	6.4	chrX	96383788	96383944	(59656951)	+	MamSINE1	SINE/tRNA-RTE	9	175	(115)	4489038
1086	26.9	8.6	3.9	chrX	96384099	96384539	(59656356)	+	Tigger13a	DNA/TcMar-Tigger	91	554	(217)	4489039
271	32.2	0.8	4.8	chrX	96548032	96548155	(59492740)	C	MamGypLTR1a	LTR/Gypsy	(38)	746	628	4489307
184	29.3	6.8	2.4	chrX	96548283	96548366	(59492529)	C	L2a	LINE/L2	(32)	3394	3307	4489308
966	21.8	0.5	0.0	chrX	96671733	96671920	(59368975)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	4489486
2268	11.5	6.9	1.4	chrX	96672153	96672496	(59368399)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4489487
1474	20.0	2.1	6.0	chrX	98201411	98201761	(57839134)	C	MLT1A	LTR/ERVL-MaLR	(37)	337	1	4491746
1783	13.8	2.8	3.0	chrX	98333659	98333987	(57706908)	+	L1MB4	LINE/L1	5846	6173	(7)	4491926
303	19.2	3.4	0.0	chrX	98334065	98334138	(57706757)	+	L1M5	LINE/L1	5599	5675	(769)	4491925
890	22.4	0.0	3.0	chrX	98518573	98518716	(57522179)	+	MER58A	DNA/hAT-Charlie	1	143	(81)	4492154
10748	13.4	1.4	0.4	chrX	98751476	98753090	(57287805)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	1	4492414
2141	14.6	3.5	1.7	chrX	98753091	98753451	(57287444)	C	THE1C	LTR/ERVL-MaLR	(0)	375	8	4492414
895	32.9	8.4	2.4	chrX	99031341	99031766	(57009129)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	136	4492742
11969	11.4	2.0	0.2	chrX	99834233	99837382	(56203513)	C	L1PBa1	LINE/L1	(3386)	3476	252	4493558
837	18.3	0.0	0.0	chrX	100359606	100359736	(55681159)	+	AluJr	SINE/Alu	1	131	(181)	4494188
14	16.9	2.9	0.0	chrX	100510125	100510158	(55530737)	+	GA-rich	Low_complexity	1	35	(0)	4494418
15	25.5	0.0	0.0	chrX	100510490	100510529	(55530366)	+	(ATAT)n	Simple_repeat	1	40	(0)	4494419
2399	9.9	0.0	0.0	chrX	101021355	101021658	(55019237)	+	AluSx	SINE/Alu	9	312	(0)	4495224
5114	21.9	4.7	2.2	chrX	101304073	101305142	(54735753)	C	L1M3f	LINE/L1	(4487)	2724	1251	4495790
1556	28.7	7.2	9.7	chrX	102554981	102556382	(53484513)	C	L1MEg	LINE/L1	(4714)	1528	164	4497387
194	18.8	0.0	0.0	chrX	103554358	103554389	(52486506)	C	L2a	LINE/L2	(34)	3392	3361	4498795
286	29.7	5.9	3.8	chrX	105002081	105002346	(51038549)	+	X1_LINE	LINE/CR1	64	335	(310)	4500937
2016	13.6	1.6	6.2	chrX	105297381	105297780	(50743115)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4501341
2700	29.1	8.0	8.4	chrX	105297781	105297979	(50742916)	C	L2a	LINE/L2	(585)	2834	2703	4501340
2115	14.9	0.0	1.0	chrX	106510184	106510484	(49530411)	C	AluJb	SINE/Alu	(14)	298	1	4502818
8653	19.3	6.5	2.2	chrX	106751018	106753156	(49287739)	+	L1PA2	LINE/L1	22	2582	(4983)	4503150
1988	15.4	0.0	0.3	chrX	108554579	108554864	(47486031)	+	AluJb	SINE/Alu	1	285	(27)	4505960
339	31.1	7.9	3.2	chrX	109685773	109685928	(46354967)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	4	4507174
511	21.6	10.0	3.0	chrX	109685929	109685990	(46354905)	+	MIR3	SINE/MIR	134	198	(10)	4507173
1063	29.4	7.2	6.8	chrX	109775303	109775849	(46265046)	+	L2a	LINE/L2	2878	3425	(1)	4507322
365	32.8	10.8	5.6	chrX	109785112	109785573	(46255322)	C	LTR79	LTR/ERVL	(0)	527	39	4507342
1876	18.0	0.0	1.3	chrX	109944325	109944624	(46096271)	+	AluJb	SINE/Alu	1	296	(16)	4507625
433	23.2	1.3	12.7	chrX	109944625	109944697	(46096198)	C	MER5A	DNA/hAT-Charlie	(89)	77	13	4507624
280	24.1	8.4	1.1	chrX	109944715	109944802	(46096093)	+	Charlie4z	DNA/hAT-Charlie	17	111	(56)	4507626
25	6.3	0.0	0.0	chrX	110021506	110021538	(46019357)	+	(TG)n	Simple_repeat	1	33	(0)	4507785
634	12.0	10.7	2.3	chrX	110055319	110055446	(45985449)	+	MER91C	DNA/hAT-Tip100	1	140	(0)	4507847
187	22.0	6.3	1.7	chrX	110055628	110055687	(45985208)	C	L2c	LINE/L2	(1)	3386	3324	4507848
750	14.1	3.2	0.7	chrX	111088761	111088910	(44951985)	C	LTR65	LTR/ERV1	(506)	163	10	4509335
1800	26.2	6.5	2.0	chrX	111551173	111551665	(44489230)	+	L2a	LINE/L2	2499	3022	(397)	4510065
2708	17.5	6.6	1.9	chrX	111551666	111552195	(44488700)	+	MER89	LTR/ERV1	1	557	(2)	4510066
6308	23.1	4.0	3.4	chrX	111602571	111604037	(44436858)	C	L1ME1	LINE/L1	(664)	5515	4064	4510129
2026	7.9	0.0	0.0	chrX	111998926	111999192	(44041703)	C	L1PA8	LINE/L1	(0)	6172	5906	4510744
2770	14.4	0.2	4.0	chrX	111999193	111999654	(44041241)	C	L1MA4	LINE/L1	(236)	6064	5618	4510741
9124	10.2	1.5	0.2	chrX	113184800	113186963	(42853932)	C	L1PA14	LINE/L1	(2)	6159	3974	4512510
19718	16.2	2.2	1.1	chrX	113255927	113262394	(42778501)	C	L1PA13	LINE/L1	(4)	8154	836	4512576
19064	16.5	2.5	1.9	chrX	113385402	113392971	(42647924)	C	L1PA15	LINE/L1	(7)	8153	567	4512737
2047	13.7	2.2	0.7	chrX	115567315	115567621	(40473274)	+	AluSz	SINE/Alu	1	312	(0)	4515759
820	17.6	0.0	2.2	chrX	115713327	115713462	(40327433)	+	FLAM_C	SINE/Alu	1	133	(10)	4516037
361	25.4	12.3	0.9	chrX	116360750	116360864	(39680031)	C	MIRc	SINE/MIR	(137)	131	2	4516577
2349	12.3	0.5	5.6	chrX	116361019	116361413	(39679482)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4516578
4376	14.6	1.0	0.3	chrX	116727972	116728663	(39312232)	+	MER50B	LTR/ERV1	1	697	(0)	4516967
615	29.5	5.4	5.1	chrX	117326415	117326671	(38714224)	C	MIR	SINE/MIR	(0)	262	5	4517607
234	27.4	3.4	7.4	chrX	117753299	117753420	(38287475)	C	MER5A	DNA/hAT-Charlie	(22)	167	51	4518123
695	24.6	0.0	0.0	chrX	120375822	120375939	(35664956)	+	FLAM_A	SINE/Alu	1	118	(24)	4522838
5289	12.9	1.4	1.0	chrX	121407120	121407915	(34632980)	+	LTR1A1	LTR/ERV1	1	799	(0)	4524393
7332	24.8	7.5	4.9	chrX	121969494	121971601	(34069294)	+	L1MA8	LINE/L1	460	2637	(4859)	4525024
13645	10.9	2.9	0.9	chrX	122422687	122426743	(33614152)	C	L1PBa	LINE/L1	(1945)	4917	634	4525460
1138	13.2	0.5	0.0	chrX	122426747	122426936	(33613959)	C	L1PBa	LINE/L1	(6668)	195	5	4525460
227	25.2	2.0	5.7	chrX	122426928	122427032	(33613863)	C	L1MEi	LINE/L1	(1061)	1151	1051	4525458
11361	14.3	3.4	0.3	chrX	122810714	122812559	(33228336)	+	Tigger1	DNA/TcMar-Tigger	1	1905	(513)	4525856
1953	17.5	2.9	1.4	chrX	122812560	122812929	(33227966)	+	Tigger2a	DNA/TcMar-Tigger	1	376	(58)	4525857
333	28.1	10.2	1.6	chrX	122830790	122831039	(33209856)	+	L1ME4b	LINE/L1	359	552	(340)	4525878
16	21.5	2.0	2.0	chrX	122831533	122831582	(33209313)	+	A-rich	Low_complexity	1	51	(0)	4525880
4348	10.2	5.5	7.4	chrX	122972119	122972859	(33068036)	+	THE1C-int	LTR/ERVL-MaLR	1	726	(854)	4526069
785	26.9	5.4	0.9	chrX	123003238	123003466	(33037429)	+	L2a	LINE/L2	3187	3426	(0)	4526122
917	34.0	12.5	3.4	chrX	125162380	125163119	(30877776)	+	L2	LINE/L2	1942	2758	(661)	4529739
21504	9.8	1.7	3.1	chrX	125444292	125450734	(30590161)	+	L1PA10	LINE/L1	11	6353	(0)	4530120
19097	17.8	2.8	2.3	chrX	125530697	125533821	(30507074)	C	L1MA1	LINE/L1	(4385)	3180	12	4530218
35738	10.1	3.3	2.8	chrX	125809929	125810860	(30230035)	C	HERVL-int	LTR/ERVL	(0)	5654	4679	4530492
199	20.0	6.2	0.0	chrX	125810861	125810905	(30229990)	+	MamRTE1	LINE/RTE-BovB	2695	2742	(1070)	4530493
35738	10.1	3.3	2.8	chrX	125810906	125811209	(30229686)	C	HERVL-int	LTR/ERVL	(976)	4678	4361	4530492
473	35.8	5.8	0.9	chrX	125838107	125838337	(30202558)	C	MIRc	SINE/MIR	(6)	262	20	4530521
395	2.2	0.0	0.0	chrX	126000519	126000564	(30040331)	+	THE1A	LTR/ERVL-MaLR	1	46	(309)	4530685
1237	7.7	0.6	0.6	chrX	126000566	126000734	(30040161)	+	THE1A	LTR/ERVL-MaLR	187	355	(0)	4530685
9902	15.6	2.3	0.4	chrX	126025840	126028132	(30012763)	C	L1PA10	LINE/L1	(4135)	2348	3	4530709
14273	18.7	2.8	1.4	chrX	126028133	126030701	(30010194)	C	L1PA13	LINE/L1	(4087)	2698	92	4530710
12	16.5	0.0	0.0	chrX	126218595	126218621	(29822274)	+	(CAGC)n	Simple_repeat	1	27	(0)	4530907
1471	18.6	1.6	1.6	chrX	126317412	126317717	(29723178)	C	MER34A1	LTR/ERV1	(2)	585	280	4531029
2443	14.7	4.4	2.6	chrX	126317718	126318144	(29722751)	+	MER83	LTR/ERV1	2	436	(12)	4531030
4917	17.7	5.2	0.6	chrX	126540386	126542278	(29498617)	+	L1MA7	LINE/L1	4290	6285	(6)	4531259
10542	12.7	0.3	2.8	chrX	127575564	127577181	(28463714)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	3	4532399
22394	9.7	4.3	0.4	chrX	129250232	129255910	(26784985)	C	L1PB1	LINE/L1	(2)	6865	903	4534452
1080	13.2	0.0	4.7	chrX	129255911	129256101	(26784794)	C	L1PB1	LINE/L1	(6426)	436	255	4534452
1853	25.1	6.0	0.5	chrX	129256145	129256712	(26784183)	C	L1MC4	LINE/L1	(371)	7671	7071	4534450
2950	11.1	1.4	1.0	chrX	129524348	129524838	(26516057)	+	L1MA4A	LINE/L1	5727	6219	(84)	4534806
352	30.8	9.3	1.9	chrX	129582718	129582876	(26458019)	C	Tigger16b	DNA/TcMar-Tigger	(103)	233	62	4534911
638	29.6	0.6	1.7	chrX	129583095	129583266	(26457629)	C	MIRb	SINE/MIR	(95)	173	4	4534912
20	11.1	0.0	0.0	chrX	130120222	130120250	(25920645)	+	(T)n	Simple_repeat	1	29	(0)	4535993
260	30.3	11.1	0.7	chrX	130120375	130120527	(25920368)	+	MamSINE1	SINE/tRNA-RTE	98	268	(22)	4535992
4385	27.2	6.8	2.0	chrX	130614988	130615574	(25425321)	+	L2a	LINE/L2	2699	3295	(131)	4536828
204	34.1	0.0	4.5	chrX	131612880	131612968	(24427927)	+	L3	LINE/CR1	61	145	(3954)	4538252
793	24.9	0.6	1.7	chrX	131613070	131613249	(24427646)	+	MER58A	DNA/hAT-Charlie	7	184	(40)	4538253
339	32.3	5.9	2.9	chrX	131644249	131644472	(24396423)	+	L1M5	LINE/L1	3570	3810	(2336)	4538283
732	32.6	6.9	0.3	chrX	131644473	131644798	(24396097)	C	HERV16-int	LTR/ERVL	(4584)	412	64	4538286
2094	13.2	0.0	0.0	chrX	131644912	131645191	(24395704)	+	AluSx1	SINE/Alu	1	280	(32)	4538287
202	36.0	9.9	5.3	chrX	132028164	132028505	(24012390)	C	L2	LINE/L2	(694)	2725	2371	4538807
264	17.8	0.0	0.0	chrX	132028506	132028550	(24012345)	C	L2a	LINE/L2	(6)	3420	3376	4538809
382	35.5	13.8	1.1	chrX	132064966	132065324	(23975571)	C	L3b	LINE/CR1	(67)	5165	4754	4538856
547	31.2	12.5	5.1	chrX	132610437	132611217	(23429678)	+	Plat_L3	LINE/CR1	978	1824	(1762)	4539615
501	28.6	32.3	1.3	chrX	133172632	133172857	(22868038)	C	L2a	LINE/L2	(281)	3145	2850	4540450
187	35.0	0.0	0.0	chrX	133172873	133172932	(22867963)	+	MamRTE1	LINE/RTE-BovB	2695	2754	(1058)	4540451
4883	14.3	3.9	3.7	chrX	134721891	134722087	(21318808)	+	L1MB7	LINE/L1	5485	5694	(490)	4543247
858	18.2	0.0	0.0	chrX	134722088	134722219	(21318676)	C	FLAM_A	SINE/Alu	(10)	132	1	4543252
4883	14.3	3.9	3.7	chrX	134722220	134722697	(21318198)	+	L1MB7	LINE/L1	5695	6168	(16)	4543247
462	27.1	3.5	6.0	chrX	136753279	136753427	(19287468)	+	MIR3	SINE/MIR	5	149	(119)	4546519
604	29.2	3.2	3.2	chrX	136753546	136753764	(19287131)	C	MamRep605	LTR?	(192)	657	439	4546520
47	7.9	0.0	0.0	chrX	137332462	137332528	(18708367)	+	(CTCTCT)n	Simple_repeat	1	67	(0)	4547577
559	27.4	9.7	5.3	chrX	137332624	137332850	(18708045)	+	MIRb	SINE/MIR	23	260	(8)	4547578
352	33.7	12.1	3.9	chrX	137368582	137368967	(18671928)	+	L2	LINE/L2	2091	2512	(907)	4547643
423	30.1	15.4	3.4	chrX	137881064	137881359	(18159536)	+	MamGyp-int	LTR/Gypsy	2416	2753	(2350)	4548544
12	16.9	2.9	2.8	chrX	137992470	137992504	(18048391)	+	(ATTG)n	Simple_repeat	1	36	(0)	4548699
346	26.9	1.1	0.0	chrX	137992888	137992980	(18047915)	+	MER91A	DNA/hAT-Tip100	1	94	(102)	4548700
180	32.1	3.5	2.3	chrX	140208118	140208203	(15832692)	C	MIRb	SINE/MIR	(1)	267	181	4551897
608	33.0	13.8	4.8	chrX	141660724	141661502	(14379393)	C	CR1_Mam	LINE/CR1	(34)	2170	1310	4554107
1520	22.7	10.7	0.8	chrX	141721724	141722078	(14318817)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	4554197
3859	29.0	5.9	6.2	chrX	141722079	141722401	(14318494)	C	L2	LINE/L2	(1673)	1746	1381	4554195
353	38.4	1.1	1.7	chrX	145008591	145008765	(11032130)	+	MamGyp-int	LTR/Gypsy	1236	1409	(3694)	4558558
2103	12.6	6.0	1.7	chrX	145418382	145418729	(10622166)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4559137
1162	11.5	3.3	0.0	chrX	146417802	146417975	(9622920)	C	Tigger3c	DNA/TcMar-Tigger	(54)	548	369	4560487
315	30.7	1.0	2.9	chrX	146418123	146418226	(9622669)	+	LTR33B	LTR/ERVL	119	220	(283)	4560488
375	28.2	5.8	4.4	chrX	146506732	146506822	(9534073)	+	L1MCc	LINE/L1	2781	2864	(4158)	4560595
2102	13.7	3.9	3.6	chrX	146506823	146507185	(9533710)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4560597
375	28.2	5.8	4.4	chrX	146507186	146507297	(9533598)	+	L1MCc	LINE/L1	2865	2987	(4035)	4560595
8570	14.6	7.8	0.9	chrX	147041553	147043023	(8997872)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	4561286
2055	10.9	8.2	2.5	chrX	147043024	147043381	(8997514)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	4561286
1651	19.2	5.9	16.7	chrX	149385384	149385963	(6654932)	+	MLT2B3	LTR/ERVL	117	634	(83)	4564551
16	22.5	2.0	2.0	chrX	151177575	151177623	(4863272)	+	(GCG)n	Simple_repeat	1	50	(0)	4567227
20	10.7	2.4	2.3	chrX	151974727	151974736	(4066159)	+	(CGCCC)n	Simple_repeat	1	50	(0)	4568354
11	17.7	5.0	2.4	chrX	151974737	151974776	(4066119)	+	(GCCCCA)n	Simple_repeat	1	42	(0)	4568355
17	23.4	1.7	3.3	chrX	151974914	151974972	(4065923)	+	G-rich	Low_complexity	1	60	(0)	4568356
3636	22.4	4.4	3.9	chrX	153427084	153427786	(2613109)	C	L1ME1	LINE/L1	(679)	5500	4798	4570241
1694	18.4	2.1	3.5	chrX	153427791	153427855	(2613040)	+	MLT1A	LTR/ERVL-MaLR	3	68	(306)	4570243
2513	10.9	1.6	0.8	chrX	153427856	153428216	(2612679)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4570244
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
396	27.7	2.0	3.9	chrY	11281214	11281367	(45946048)	+	L2	LINE/L2	724	874	(2545)	4589056
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057