509	20.0	0.0	0.0	chr1	907171	907250	(248049172)	+	AluSz6	SINE/Alu	217	296	(16)	1162
2267	12.6	0.0	0.7	chr1	907253	907562	(248048860)	+	AluSz	SINE/Alu	1	308	(4)	1163
255	24.6	12.7	0.0	chr1	1602742	1602851	(247353571)	C	MER113	DNA/hAT-Charlie	(89)	432	307	2041
1943	13.4	0.0	6.9	chr1	1900940	1901125	(247055297)	+	AluJb	SINE/Alu	130	302	(10)	2583
84	6.3	0.0	3.2	chr1	1901128	1901253	(247055169)	+	(GAAA)n	Simple_repeat	1	126	(0)	2586
1207	9.6	1.3	0.0	chr1	2183247	2183402	(246773020)	+	AluSx3	SINE/Alu	133	290	(21)	2972
896	23.0	7.0	6.0	chr1	2183543	2183905	(246772517)	C	MLT1A1	LTR/ERVL-MaLR	(7)	401	4	2973
17	14.6	4.1	3.9	chr1	3069593	3069641	(245886781)	+	G-rich	Low_complexity	1	51	(0)	3718
16	9.3	0.0	0.0	chr1	3069702	3069724	(245886698)	+	(CT)n	Simple_repeat	1	23	(0)	3719
355	24.5	2.0	3.0	chr1	5871871	5871971	(243084451)	+	L1MC5a	LINE/L1	2523	2622	(155)	7382
283	25.3	6.7	0.0	chr1	6205242	6205324	(242751098)	C	MIR3	SINE/MIR	(84)	124	36	7831
1078	30.2	11.2	2.4	chr1	6217165	6217720	(242738702)	+	L2a	LINE/L2	2093	2700	(719)	7850
434	31.4	7.1	2.9	chr1	7994844	7995301	(240961121)	C	L1MC4	LINE/L1	(4986)	1229	938	10724
2638	28.6	8.5	4.1	chr1	8107552	8108168	(240848254)	+	L1M5	LINE/L1	2834	3488	(2658)	10944
18	28.6	1.9	8.3	chr1	8463634	8463787	(240492635)	+	GA-rich	Low_complexity	1	157	(0)	11654
978	26.7	16.8	4.0	chr1	8660893	8661881	(240294541)	C	L2a	LINE/L2	(4)	3422	2274	12013
15	8.2	12.7	3.2	chr1	8879289	8879343	(240077079)	+	(CGCCTG)n	Simple_repeat	1	62	(0)	12447
1062	23.9	14.3	3.5	chr1	8980886	8981262	(239975160)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	81	12680
67	13.4	4.9	6.6	chr1	8981263	8981467	(239974955)	+	(TTCC)n	Simple_repeat	1	201	(0)	12681
1638	17.1	1.7	4.9	chr1	8981476	8981780	(239974642)	C	AluJb	SINE/Alu	(17)	295	1	12682
250	27.5	4.5	2.0	chr1	9231745	9231857	(239724565)	+	MIRc	SINE/MIR	56	179	(89)	13213
1511	13.3	17.3	0.0	chr1	9563711	9563958	(239392464)	C	AluSz	SINE/Alu	(12)	300	1	13905
2415	6.6	1.0	0.7	chr1	9626623	9626924	(239329498)	+	AluSx	SINE/Alu	1	303	(9)	14015
319	28.4	15.7	7.8	chr1	10520927	10521288	(238435134)	C	L1MC4	LINE/L1	(4131)	2084	1889	15968
30	9.6	2.2	0.0	chr1	10791724	10791769	(238164653)	+	(AG)n	Simple_repeat	1	47	(0)	16344
337	29.1	16.0	4.3	chr1	10833687	10833873	(238122549)	C	L2c	LINE/L2	(1)	3425	3213	16433
27	29.9	1.5	9.7	chr1	10865898	10866161	(238090261)	+	A-rich	Low_complexity	1	268	(0)	16491
42	24.6	9.9	1.7	chr1	10865899	10866160	(238090262)	+	GA-rich	Low_complexity	1	288	(0)	16492
2372	16.8	3.3	16.5	chr1	11432075	11432351	(237524071)	+	LTR43B	LTR/ERV1	252	496	(76)	17690
1773	14.8	4.0	0.0	chr1	11432352	11432642	(237523780)	C	AluJb	SINE/Alu	(1)	311	9	17695
763	18.6	0.8	0.0	chr1	11561721	11561844	(237394578)	+	AluJo	SINE/Alu	1	125	(187)	17938
70	16.2	2.1	1.4	chr1	11561853	11561984	(237394438)	+	GA-rich	Low_complexity	8	142	(0)	17939
840	17.5	8.3	2.9	chr1	11561986	11562156	(237394266)	+	AluJo	SINE/Alu	120	300	(12)	17940
37	22.2	3.2	3.9	chr1	12073427	12073581	(236882841)	+	(CCTTTC)n	Simple_repeat	1	153	(0)	19094
2084	13.5	0.0	3.5	chr1	15172097	15172408	(233784014)	+	AluJb	SINE/Alu	3	303	(9)	24698
28	21.7	6.3	1.5	chr1	15172409	15172530	(233783892)	+	GA-rich	Low_complexity	1	127	(0)	24699
433	24.4	0.9	1.4	chr1	15172531	15172637	(233783785)	+	MIR	SINE/MIR	24	127	(141)	24700
225	31.1	11.2	1.6	chr1	15200718	15200838	(233755584)	+	UCON80_AMi	Unknown	78	211	(11)	24766
76	15.3	8.1	3.7	chr1	15222614	15222864	(233733558)	+	GA-rich	Low_complexity	1	261	(0)	24809
371	25.8	22.2	2.4	chr1	15626134	15626624	(233329798)	C	L2a	LINE/L2	(0)	3426	2781	25703
623	24.9	3.9	13.2	chr1	16199663	16200092	(232756330)	+	L2b	LINE/L2	2799	3191	(235)	26920
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
1039	20.7	7.8	0.4	chr1	17045765	17046050	(231910372)	+	MER51A	LTR/ERV1	334	640	(0)	28562
45	9.9	1.3	0.0	chr1	17079609	17079684	(231876738)	+	(GTGTGA)n	Simple_repeat	1	77	(0)	28638
2180	11.4	1.3	0.0	chr1	17079794	17080090	(231876332)	C	AluSz	SINE/Alu	(11)	301	1	28639
13	24.8	0.0	0.0	chr1	17597106	17597143	(231359279)	+	(CTGCAT)n	Simple_repeat	1	38	(0)	29820
13	15.8	0.0	9.1	chr1	18154775	18154818	(230801604)	+	(CCCT)n	Simple_repeat	1	44	(0)	31048
16	14.7	6.4	2.0	chr1	18154800	18154846	(230801576)	+	(TTCACT)n	Simple_repeat	1	50	(0)	31049
119	3.1	8.3	1.8	chr1	18273332	18273535	(230682887)	+	(TTCCT)n	Simple_repeat	1	221	(0)	31285
400	30.6	6.4	3.3	chr1	19011369	19011520	(229944902)	+	MIRc	SINE/MIR	4	160	(108)	32918
368	22.7	2.7	5.2	chr1	19313066	19313181	(229643241)	C	MIRb	SINE/MIR	(35)	233	121	33410
446	34.2	10.6	3.8	chr1	19457535	19458111	(229498311)	+	L1ME4c	LINE/L1	110	730	(100)	33663
424	20.0	0.0	0.0	chr1	19458180	19458259	(229498163)	+	MADE2	DNA/TcMar-Mariner	1	80	(0)	33664
416	14.1	0.0	6.0	chr1	19557577	19557659	(229398763)	+	LTR37-int	LTR/ERV1	2491	2568	(2650)	33914
119	7.1	1.4	5.5	chr1	19557660	19557874	(229398548)	+	(CTTCC)n	Simple_repeat	1	218	(0)	33915
42	28.1	1.6	0.0	chr1	19614346	19614469	(229341953)	+	(AC)n	Simple_repeat	1	126	(0)	34058
1190	3.0	0.0	0.0	chr1	19614484	19614616	(229341806)	C	AluY	SINE/Alu	(178)	133	1	34059
15	28.1	2.4	8.5	chr1	20430627	20430752	(228525670)	+	G-rich	Low_complexity	1	129	(0)	35753
41	28.1	0.8	0.8	chr1	20947531	20947652	(228008770)	+	GA-rich	Low_complexity	1	123	(0)	36851
9155	12.9	4.7	3.1	chr1	20987361	20988920	(227967502)	+	Tigger1	DNA/TcMar-Tigger	1	1586	(832)	36918
2189	13.5	0.7	0.0	chr1	21142967	21143269	(227813153)	+	AluSx1	SINE/Alu	1	305	(7)	37221
30	27.9	3.5	4.0	chr1	21143270	21143400	(227813022)	+	A-rich	Low_complexity	14	143	(0)	37222
926	22.4	7.3	0.0	chr1	22750470	22750697	(226205725)	+	MER113	DNA/hAT-Charlie	59	304	(217)	40850
968	15.0	0.0	0.0	chr1	23004477	23004609	(225951813)	+	FLAM_C	SINE/Alu	1	133	(10)	41434
756	13.5	0.0	8.7	chr1	23004610	23004673	(225951749)	+	MER4-int	LTR/ERV1	6544	6596	(2)	41433
3849	10.1	4.0	9.7	chr1	23004680	23005121	(225951301)	+	MER4A1_	LTR/ERV1	1	416	(184)	41433
1624	17.9	4.1	1.1	chr1	23116372	23116523	(225839899)	+	AluJr4	SINE/Alu	134	294	(18)	41631
27	15.1	1.5	4.5	chr1	23116586	23116651	(225839771)	+	A-rich	Low_complexity	1	67	(0)	41633
330	39.4	3.9	2.1	chr1	23404271	23404550	(225551872)	+	L2b	LINE/L2	2996	3280	(95)	42330
2315	10.1	1.3	1.3	chr1	23716949	23717256	(225239166)	+	AluSg	SINE/Alu	3	310	(0)	43183
264	27.9	9.3	4.2	chr1	23717257	23717271	(225239151)	+	FRAM	SINE/Alu	146	160	(6)	43182
380	26.7	8.8	11.7	chr1	23718425	23718743	(225237679)	C	L2a	LINE/L2	(123)	3264	2954	43185
230	24.6	6.8	1.4	chr1	24641796	24641865	(224314557)	C	L2a	LINE/L2	(1045)	2374	2301	45369
185	26.9	10.8	0.9	chr1	24641884	24641992	(224314430)	C	L2a	LINE/L2	(173)	3253	3133	45373
473	6.8	25.6	1.1	chr1	24642062	24642149	(224314273)	+	AluJo	SINE/Alu	1	117	(195)	45374
1755	16.0	3.1	0.7	chr1	24727249	24727530	(224228892)	C	AluSq2	SINE/Alu	(20)	293	5	45586
4425	15.7	4.1	4.1	chr1	24884295	24884914	(224071508)	C	L1MB5	LINE/L1	(54)	6120	5492	45935
62	0.0	0.0	0.0	chr1	24884915	24884970	(224071452)	+	(TTTCC)n	Simple_repeat	1	56	(0)	45936
4425	15.3	1.5	6.1	chr1	24884971	24885280	(224071142)	C	L1MB5	LINE/L1	(683)	5491	5200	45935
9194	11.9	4.0	3.2	chr1	25841824	25842899	(223113523)	+	Tigger1	DNA/TcMar-Tigger	220	1321	(1097)	47920
865	25.7	0.0	0.0	chr1	25876688	25876862	(223079560)	+	AluJr	SINE/Alu	137	311	(1)	47997
23	14.0	2.0	2.0	chr1	25876868	25876917	(223079505)	+	GA-rich	Low_complexity	1	51	(0)	47998
2216	9.2	0.0	1.3	chr1	26815857	26816160	(222140262)	+	AluSx3	SINE/Alu	1	300	(11)	50222
43	30.7	3.7	0.6	chr1	26816161	26816321	(222140101)	+	GA-rich	Low_complexity	1	167	(0)	50223
476	30.6	0.0	0.0	chr1	26816329	26816449	(222139973)	+	ERVL-E-int	LTR/ERVL	2506	2626	(3041)	50224
1526	23.6	14.2	7.6	chr1	27026923	27027829	(221928593)	+	L2a	LINE/L2	2334	3425	(1)	50717
13	10.1	5.9	2.8	chr1	27122850	27122883	(221833539)	+	G-rich	Low_complexity	1	36	(0)	50979
482	29.0	11.1	4.7	chr1	27138519	27138987	(221817435)	C	L2a	LINE/L2	(217)	3209	2698	51020
14	22.2	5.8	0.0	chr1	27672284	27672335	(221284087)	+	(TCTGCAC)n	Simple_repeat	1	55	(0)	52273
729	26.4	1.1	2.2	chr1	28448229	28448410	(220508012)	+	AluJb	SINE/Alu	131	310	(2)	54229
29	0.0	0.0	4.8	chr1	28448418	28448459	(220507963)	+	(GGAAA)n	Simple_repeat	1	42	(0)	54230
2489	6.0	0.0	3.2	chr1	28448471	28448785	(220507637)	+	AluY	SINE/Alu	1	305	(6)	54231
32	38.1	3.4	3.2	chr1	28770799	28770805	(220185617)	+	(TTTC)n	Simple_repeat	1	36	(211)	55099
92	10.0	8.6	0.9	chr1	28770806	28771003	(220185419)	+	(CTTCC)n	Simple_repeat	1	215	(0)	55100
32	38.1	3.4	3.2	chr1	28771004	28771037	(220185385)	+	(TTTC)n	Simple_repeat	37	247	(0)	55099
116	6.4	3.6	3.0	chr1	28846822	28847016	(220109406)	+	(TTTC)n	Simple_repeat	1	202	(0)	55304
19	24.3	4.6	0.0	chr1	28846996	28847060	(220109362)	+	(CCTTCC)n	Simple_repeat	1	68	(0)	55305
2239	10.7	0.0	0.0	chr1	28847061	28847351	(220109071)	C	AluSq	SINE/Alu	(22)	291	1	55306
34	24.9	3.8	0.9	chr1	30727879	30727984	(218228438)	+	(TCTC)n	Simple_repeat	1	110	(0)	58929
35	25.5	1.9	1.9	chr1	31031861	31031963	(217924459)	+	(CT)n	Simple_repeat	1	105	(0)	59594
3085	17.4	3.4	3.5	chr1	31515895	31516033	(217440389)	+	Tigger1	DNA/TcMar-Tigger	50	182	(2236)	60826
1692	17.5	1.0	3.9	chr1	31516034	31516057	(217440365)	C	AluSz6	SINE/Alu	(12)	300	277	60828
49	1.4	3.7	5.9	chr1	31516058	31516139	(217440283)	+	(CTTTC)n	Simple_repeat	1	85	(0)	60829
1692	17.5	1.0	3.9	chr1	31516140	31516423	(217439999)	C	AluSz6	SINE/Alu	(36)	276	1	60828
284	32.8	5.9	1.5	chr1	31585912	31586041	(217370381)	C	MIRb	SINE/MIR	(39)	229	94	60950
181	25.3	12.0	2.1	chr1	31586084	31586180	(217370242)	+	L2	LINE/L2	1492	1599	(1820)	60951
269	20.9	8.3	12.7	chr1	31586167	31586292	(217370130)	+	MIR1_Amn	SINE/MIR	65	184	(46)	60952
1790	14.4	0.0	2.7	chr1	31803467	31803758	(217152664)	+	AluJr	SINE/Alu	17	300	(12)	61343
38	17.2	1.1	3.4	chr1	31803759	31803846	(217152576)	+	A-rich	Low_complexity	1	89	(0)	61344
766	22.6	4.9	0.1	chr1	31803848	31804127	(217152295)	+	L1MEd	LINE/L1	1082	1392	(5711)	61342
243	33.0	2.2	0.0	chr1	32023075	32023162	(216933260)	C	MIR	SINE/MIR	(170)	92	3	61894
451	28.3	0.0	0.8	chr1	32023291	32023411	(216933011)	+	MIRc	SINE/MIR	36	155	(113)	61895
1926	12.1	6.5	0.0	chr1	32110624	32110913	(216845509)	+	AluSx	SINE/Alu	1	310	(2)	62105
190	33.3	10.2	2.9	chr1	32110914	32110956	(216845466)	+	MIR	SINE/MIR	205	254	(8)	62096
5126	18.9	16.8	12.8	chr1	32114453	32114852	(216841570)	C	Tigger1	DNA/TcMar-Tigger	(1041)	1377	954	62110
2073	12.6	0.3	0.0	chr1	32114853	32115138	(216841284)	C	AluSz6	SINE/Alu	(24)	288	2	62115
18	4.5	0.0	0.0	chr1	32127969	32127991	(216828431)	+	(AC)n	Simple_repeat	1	23	(0)	62156
1778	16.6	8.6	3.6	chr1	32142282	32142525	(216813897)	C	MLT1B	LTR/ERVL-MaLR	(108)	282	8	62196
590	24.9	10.9	1.9	chr1	32178994	32179202	(216777220)	+	MIR	SINE/MIR	33	262	(0)	62268
1499	15.1	4.1	0.0	chr1	32356352	32356583	(216599839)	C	AluJb	SINE/Alu	(64)	248	7	62694
64	22.9	2.3	1.7	chr1	32356597	32356767	(216599655)	+	(TTTC)n	Simple_repeat	1	175	(0)	62695
1989	17.2	0.0	1.3	chr1	32356768	32357081	(216599341)	C	AluJr	SINE/Alu	(0)	312	3	62696
1307	11.5	0.0	0.0	chr1	32473160	32473333	(216483089)	+	AluSx	SINE/Alu	137	310	(2)	62923
1938	15.9	0.0	2.6	chr1	32473513	32473820	(216482602)	C	AluJr	SINE/Alu	(12)	300	1	62924
709	29.9	15.5	0.9	chr1	32623204	32623632	(216332790)	+	L2a	LINE/L2	1184	1686	(1733)	63319
226	30.7	0.0	12.0	chr1	32656655	32656754	(216299668)	+	L2c	LINE/L2	3286	3373	(14)	63413
469	33.6	6.5	1.8	chr1	32759762	32759982	(216196440)	+	MIRc	SINE/MIR	33	264	(4)	63671
10153	3.5	0.4	10.7	chr1	32803739	32805221	(216151201)	C	SVA_B	Retroposon/SVA	(1)	1382	53	63776
68	4.2	0.0	0.0	chr1	32805222	32805295	(216151127)	+	(GGGGAGAG)n	Simple_repeat	1	74	(0)	63777
4616	11.9	14.6	2.7	chr1	32805301	32805679	(216150743)	C	Tigger1	DNA/TcMar-Tigger	(1537)	881	459	63772
2112	10.8	0.3	0.3	chr1	32934399	32934684	(216021738)	+	AluSz6	SINE/Alu	1	286	(26)	64058
70	0.0	0.0	0.0	chr1	33136114	33136175	(215820247)	+	(CCTT)n	Simple_repeat	1	62	(0)	64521
51	34.9	2.1	0.0	chr1	33136176	33136196	(215820226)	+	(CTCT)n	Simple_repeat	1	188	(0)	64522
77	13.0	4.9	1.8	chr1	33136197	33136359	(215820063)	+	(TTCT)n	Simple_repeat	1	171	(0)	64523
1997	13.4	1.3	0.3	chr1	33136365	33136669	(215819753)	C	AluSz6	SINE/Alu	(4)	308	1	64524
286	30.6	0.0	9.0	chr1	33348862	33348994	(215607428)	+	MIR3	SINE/MIR	7	127	(81)	64944
3196	21.1	4.7	8.3	chr1	35278720	35280084	(213676338)	C	MLT1C-int	LTR/ERVL-MaLR	(103)	1386	44	68443
73	26.1	1.8	2.7	chr1	35280086	35280306	(213676116)	+	(TTTC)n	Simple_repeat	1	225	(0)	68445
22	7.4	0.0	0.0	chr1	35688973	35689001	(213267421)	+	(AG)n	Simple_repeat	1	29	(0)	69245
237	19.1	8.1	5.6	chr1	36236350	36236421	(212720001)	C	MER3	DNA/hAT-Charlie	(135)	74	1	70451
16	30.8	0.0	3.0	chr1	36236451	36236516	(212719906)	+	(CCCTTCC)n	Simple_repeat	1	66	(0)	70452
440	17.4	0.0	0.0	chr1	36236519	36236587	(212719835)	C	AluJb	SINE/Alu	(235)	77	9	70453
3656	16.0	4.2	0.6	chr1	36465010	36465694	(212490728)	+	MER67C	LTR/ERV1	1	711	(0)	70936
201	18.6	6.3	6.3	chr1	37807064	37807126	(211149296)	+	Penelope1_Vert	LINE/Penelope	851	913	(174)	73484
19	18.9	2.4	8.3	chr1	37884305	37884386	(211072036)	+	(TTTCC)n	Simple_repeat	1	84	(0)	73641
1236	18.9	0.0	0.0	chr1	37884387	37884582	(211071840)	C	AluJo	SINE/Alu	(116)	196	1	73642
2085	29.6	3.2	1.5	chr1	38143731	38144383	(210812039)	+	HERV16-int	LTR/ERVL	1	664	(4332)	74158
587	31.0	14.6	5.8	chr1	39114624	39116377	(209840045)	C	L2c	LINE/L2	(10)	3377	1455	76118
2179	11.0	4.0	0.0	chr1	39191881	39192172	(209764250)	+	AluSz6	SINE/Alu	1	304	(8)	76275
1552	17.0	1.1	5.3	chr1	39865558	39865840	(209090582)	+	AluJb	SINE/Alu	4	274	(38)	77576
93	23.0	4.1	2.6	chr1	39865841	39866132	(209090290)	+	GA-rich	Low_complexity	1	304	(0)	77577
503	17.4	0.0	1.0	chr1	40373376	40373474	(208582948)	+	MIR	SINE/MIR	164	261	(1)	78693
12	24.3	0.0	8.1	chr1	40373475	40373536	(208582886)	+	(CTTC)n	Simple_repeat	1	62	(0)	78694
232	27.7	21.7	1.4	chr1	41240912	41241050	(207715372)	+	L3	LINE/CR1	3638	3812	(287)	80409
235	34.6	3.1	7.5	chr1	41241080	41241279	(207715143)	+	L3	LINE/CR1	3905	4095	(4)	80409
241	31.1	17.0	0.6	chr1	43912456	43912617	(205043805)	C	L2b	LINE/L2	(557)	2862	2669	85129
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
562	31.9	14.0	1.8	chr1	44233584	44234202	(204722220)	+	L2c	LINE/L2	1635	2341	(1078)	85714
227	27.3	22.1	2.5	chr1	44234179	44234381	(204722041)	+	L2c	LINE/L2	2594	2847	(572)	85714
297	23.2	9.9	9.6	chr1	44269192	44269375	(204687047)	C	MIR3	SINE/MIR	(11)	197	4	85759
198	20.8	0.0	7.7	chr1	44707937	44707988	(204248434)	+	L2c	LINE/L2	3340	3387	(0)	86532
2157	12.8	0.0	0.0	chr1	45386068	45386365	(203570057)	+	AluSq2	SINE/Alu	6	303	(10)	87865
26	25.4	1.1	3.4	chr1	45386378	45386468	(203569954)	+	A-rich	Low_complexity	1	88	(0)	87866
1138	13.2	0.5	6.8	chr1	45386525	45386654	(203569768)	C	L1PB2	LINE/L1	(0)	6151	6032	87867
449	29.0	23.7	0.5	chr1	46284552	46284936	(202671486)	C	L2b	LINE/L2	(1749)	1670	1169	89708
2194	13.2	0.0	0.3	chr1	46352169	46352471	(202603951)	+	AluSx	SINE/Alu	1	302	(10)	89869
1357	15.5	1.0	15.8	chr1	47340081	47340434	(201615988)	C	AluJb	SINE/Alu	(11)	301	1	91386
667	33.7	9.7	3.1	chr1	47371245	47372016	(201584406)	+	L2	LINE/L2	1792	2619	(800)	91466
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
97	2.4	0.0	5.5	chr1	50917568	50917712	(198038710)	+	(AAGGA)n	Simple_repeat	1	145	(0)	97627
405	26.8	2.1	9.2	chr1	51618703	51618854	(197337568)	C	MIRb	SINE/MIR	(68)	200	60	99114
16	16.3	4.9	0.0	chr1	51649560	51649600	(197306822)	+	(CTTT)n	Simple_repeat	1	43	(0)	99180
551	26.3	2.1	18.3	chr1	51951053	51951138	(197005284)	C	MIRc	SINE/MIR	(21)	247	167	99805
270	25.3	13.7	6.0	chr1	52533364	52533611	(196422811)	C	HAL1	LINE/L1	(477)	2030	1761	101049
1949	15.2	1.7	1.0	chr1	52533686	52533981	(196422441)	+	AluSz6	SINE/Alu	1	298	(14)	101053
2471	21.0	14.7	6.3	chr1	52635205	52635936	(196320486)	C	LTR8B	LTR/ERV1	(1)	819	16	101312
863	25.0	8.9	3.4	chr1	52713616	52713880	(196242542)	+	Charlie2a	DNA/hAT-Charlie	8	288	(2573)	101541
1506	12.0	0.9	0.0	chr1	52713881	52714088	(196242334)	+	AluSx	SINE/Alu	85	294	(18)	101542
366	30.9	6.1	0.8	chr1	52747445	52747568	(196208854)	+	MIRb	SINE/MIR	3	133	(135)	101639
6170	11.4	4.2	0.8	chr1	52761071	52762212	(196194210)	C	L1MA5A	LINE/L1	(4)	6293	5112	101679
683	28.8	4.8	0.5	chr1	52841838	52842057	(196114365)	C	MIRb	SINE/MIR	(13)	255	26	101888
204	20.9	0.0	0.0	chr1	53588290	53588332	(195368090)	+	L2b	LINE/L2	3296	3338	(37)	103359
380	18.7	4.2	2.1	chr1	53890341	53890433	(195065989)	C	MIRb	SINE/MIR	(56)	212	118	103981
409	35.2	10.2	7.0	chr1	56380794	56381337	(192575085)	C	L2b	LINE/L2	(6)	3369	2808	108711
526	19.8	4.1	0.8	chr1	56584152	56584268	(192372154)	C	MIRc	SINE/MIR	(27)	241	121	109130
427	25.5	1.6	5.1	chr1	58395320	58395476	(190560946)	+	MIR3	SINE/MIR	59	203	(5)	112768
70	22.9	2.7	3.5	chr1	61071508	61071727	(187884695)	+	(TCTT)n	Simple_repeat	1	226	(0)	117634
1867	16.7	0.3	2.5	chr1	61071728	61072044	(187884378)	C	AluJo	SINE/Alu	(2)	310	1	117635
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
5045	21.1	3.2	7.5	chr1	62673782	62675132	(186281290)	+	L1MB7	LINE/L1	4017	5310	(836)	120611
30	28.7	1.9	0.9	chr1	63172666	63172770	(185783652)	+	A-rich	Low_complexity	1	107	(0)	121526
901	27.1	2.2	3.0	chr1	63864006	63864237	(185092185)	C	MIR	SINE/MIR	(0)	262	33	122849
235	31.1	1.8	14.6	chr1	64539840	64540031	(184416391)	+	L2c	LINE/L2	3161	3327	(60)	124078
249	34.2	3.8	1.3	chr1	64941615	64941768	(184014654)	C	MIR3	SINE/MIR	(16)	192	35	124761
95	16.7	2.9	4.4	chr1	64973147	64973388	(183983034)	+	A-rich	Low_complexity	1	249	(0)	124812
17	30.3	1.0	5.0	chr1	65150240	65150263	(183806159)	+	(TTTCTC)n	Simple_repeat	1	30	(69)	125214
18	4.5	0.0	0.0	chr1	65150264	65150286	(183806136)	+	(TC)n	Simple_repeat	1	23	(0)	125215
17	30.3	1.0	5.0	chr1	65150287	65150337	(183806085)	+	(TTTCTC)n	Simple_repeat	31	99	(0)	125214
390	28.1	8.3	3.9	chr1	65238990	65239173	(183717249)	C	L1MC4	LINE/L1	(0)	8042	7853	125393
522	22.3	1.8	0.9	chr1	65239174	65239286	(183717136)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	125394
36	26.7	1.0	0.0	chr1	66123470	66123567	(182832855)	+	(CCTC)n	Simple_repeat	1	99	(0)	126743
34	18.0	1.2	3.5	chr1	66254991	66255010	(182701412)	+	(TCTTT)n	Simple_repeat	1	82	(0)	126931
28	24.5	0.0	0.0	chr1	66255011	66255071	(182701351)	+	(T)n	Simple_repeat	1	61	(0)	126932
229	32.4	0.0	1.3	chr1	66446659	66446733	(182509689)	C	L2a	LINE/L2	(1)	3425	3352	127251
28	16.5	0.0	0.0	chr1	67342194	67342241	(181614181)	+	(T)n	Simple_repeat	1	48	(0)	128666
186	25.0	7.7	0.0	chr1	67713731	67713790	(181242632)	+	MIR	SINE/MIR	111	175	(87)	129452
36	7.3	0.0	0.0	chr1	68230571	68230614	(180725808)	+	(GT)n	Simple_repeat	1	44	(0)	130264
1017	28.4	3.4	3.1	chr1	68454680	68454973	(180501449)	C	MLT1H	LTR/ERVL-MaLR	(240)	309	15	130684
561	24.9	12.1	3.7	chr1	70213693	70213880	(178742542)	C	MIR	SINE/MIR	(44)	218	13	133022
2386	10.6	0.3	0.3	chr1	75526853	75527164	(173429258)	+	AluSx	SINE/Alu	1	312	(0)	140040
53	27.0	0.6	3.0	chr1	75527165	75527316	(173429106)	+	A-rich	Low_complexity	15	163	(0)	140041
2112	12.1	0.0	0.0	chr1	77673315	77673594	(171282828)	+	AluSx1	SINE/Alu	1	280	(32)	143283
27	19.4	0.0	2.9	chr1	77841733	77841791	(171114631)	+	(CTTT)n	Simple_repeat	1	57	(0)	143603
1662	16.7	6.2	1.4	chr1	77841792	77842084	(171114338)	C	AluJo	SINE/Alu	(3)	309	2	143604
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
17	18.4	3.9	1.9	chr1	84091024	84091074	(164865348)	+	(TTTCAC)n	Simple_repeat	1	53	(0)	152054
286	22.5	2.4	0.0	chr1	84121410	84121489	(164834933)	C	Arthur1	DNA/hAT-Tip100	(984)	2963	2882	152099
1447	22.8	0.0	0.0	chr1	84121503	84121770	(164834652)	C	Arthur1	DNA/hAT-Tip100	(3674)	273	6	152101
274	25.2	11.2	5.2	chr1	85062535	85062668	(163893754)	C	L2a	LINE/L2	(0)	3426	3284	153532
297	29.3	6.2	2.6	chr1	85461251	85461404	(163495018)	+	L2c	LINE/L2	3220	3379	(8)	154193
98	19.0	5.0	1.8	chr1	85500025	85500284	(163456138)	+	(TTCC)n	Simple_repeat	1	273	(0)	154258
5270	20.4	9.9	4.3	chr1	85564202	85564586	(163391836)	+	L1MEc	LINE/L1	1063	1453	(4947)	154366
21	23.3	0.0	0.0	chr1	88683885	88683929	(160272493)	+	A-rich	Low_complexity	1	45	(0)	158815
20	17.4	0.0	0.0	chr1	88685229	88685267	(160271155)	+	(T)n	Simple_repeat	1	39	(0)	158817
12	19.6	2.9	0.0	chr1	89720098	89720132	(159236290)	+	(GTGAGT)n	Simple_repeat	1	36	(0)	160234
749	27.4	4.6	1.3	chr1	89902962	89903194	(159053228)	C	MIR	SINE/MIR	(17)	245	5	160520
367	30.9	2.6	0.9	chr1	90003738	90003848	(158952574)	+	MIR3	SINE/MIR	89	201	(7)	160701
191	29.9	4.9	2.0	chr1	91511076	91511174	(157445248)	+	L2	LINE/L2	2486	2587	(832)	162827
65	19.3	3.9	4.7	chr1	92446011	92446214	(156510208)	+	(CTTT)n	Simple_repeat	1	212	(0)	164492
13	4.1	3.7	3.6	chr1	93179890	93179916	(155776506)	+	(GCCTC)n	Simple_repeat	1	28	(0)	165854
15	19.2	1.9	5.6	chr1	93347491	93347543	(155608879)	+	(TTTTC)n	Simple_repeat	1	54	(0)	166157
23	18.2	5.7	4.3	chr1	93449064	93449151	(155507271)	+	(CCTTT)n	Simple_repeat	1	93	(0)	166316
407	30.4	7.2	2.9	chr1	93449552	93449724	(155506698)	C	L3	LINE/CR1	(12)	4087	3907	166317
2102	12.4	3.3	0.0	chr1	93844037	93844327	(155112095)	+	AluSg	SINE/Alu	1	301	(9)	166920
2832	10.7	5.2	2.9	chr1	94661344	94661797	(154294625)	C	MER4C	LTR/ERV1	(0)	465	1	168108
14007	14.8	3.4	3.4	chr1	94661806	94663361	(154293061)	C	MER4-int	LTR/ERV1	(2)	6596	5061	168108
2018	25.6	12.7	6.0	chr1	94818824	94819777	(154136645)	C	L1MEh	LINE/L1	(952)	1456	430	168357
230	21.5	12.2	6.5	chr1	95022019	95022157	(153934265)	+	UCON4	Unknown	85	232	(71)	168707
80	24.1	5.5	3.8	chr1	97529641	97529649	(151426773)	+	(CTTC)n	Simple_repeat	1	146	(200)	172163
42	33.5	4.8	4.0	chr1	97529650	97529959	(151426463)	+	(TCCCT)n	Simple_repeat	1	325	(0)	172164
1571	13.2	0.0	0.0	chr1	97814706	97814925	(151141497)	+	AluSx	SINE/Alu	85	304	(8)	172556
77	15.2	4.2	6.2	chr1	97814928	97815131	(151141291)	+	A-rich	Low_complexity	1	200	(0)	172557
993	25.7	5.5	4.3	chr1	98681612	98681936	(150274486)	+	L1MC4	LINE/L1	7556	7884	(158)	173781
2274	13.8	0.0	0.0	chr1	99652322	99652633	(149303789)	+	AluSz	SINE/Alu	1	312	(0)	175133
74	8.8	0.9	0.9	chr1	99652636	99652748	(149303674)	+	(AAAGA)n	Simple_repeat	1	114	(0)	175134
2153	13.5	0.3	1.0	chr1	100350912	100351222	(148605200)	+	AluSz6	SINE/Alu	1	309	(3)	176445
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
3289	16.9	2.1	5.8	chr1	100362799	100363434	(148592988)	C	LTR9	LTR/ERV1	(0)	612	1	176463
198	29.6	9.2	3.6	chr1	101254009	101254120	(147702302)	C	MIR	SINE/MIR	(83)	179	61	177754
326	24.3	0.0	0.0	chr1	101254182	101254251	(147702171)	C	MIR3	SINE/MIR	(10)	198	129	177755
684	22.4	3.8	14.2	chr1	104706523	104706960	(144249462)	C	LTR12D	LTR/ERV1	(149)	1105	765	181984
26	0.0	0.0	0.0	chr1	107058863	107058887	(141897535)	+	(GTTTT)n	Simple_repeat	1	25	(0)	184894
14	17.1	0.0	6.7	chr1	108699742	108699786	(140256636)	+	A-rich	Low_complexity	1	45	(0)	187170
19	13.5	5.9	1.9	chr1	108720147	108720197	(140236225)	+	(CTTCC)n	Simple_repeat	1	54	(0)	187201
216	33.1	2.3	0.0	chr1	108720219	108720306	(140236116)	C	L2a	LINE/L2	(17)	3409	3266	187202
968	25.1	6.3	0.5	chr1	109438892	109439099	(139517323)	+	LTR16B	LTR/ERVL	1	221	(242)	188582
1547	21.6	7.0	1.1	chr1	109439114	109439567	(139516855)	+	L1M5	LINE/L1	3080	3562	(2584)	188583
69	22.1	4.2	2.2	chr1	109907295	109907507	(139048915)	+	A-rich	Low_complexity	1	222	(0)	189260
478	21.6	4.3	0.7	chr1	113222981	113223115	(135733307)	+	L1MB7	LINE/L1	6033	6172	(12)	194700
32	32.1	4.5	0.0	chr1	113223163	113223295	(135733127)	+	GA-rich	Low_complexity	1	139	(0)	194701
247	32.9	11.3	4.3	chr1	113389101	113389321	(135567101)	C	L2b	LINE/L2	(121)	3266	3018	194971
6198	24.5	16.8	3.4	chr1	114384540	114385771	(134570651)	C	L1M4b	LINE/L1	(3918)	2949	1455	196481
848	18.7	6.8	0.6	chr1	114710368	114710534	(134245888)	+	AluJb	SINE/Alu	135	312	(0)	197150
27	17.7	1.7	0.0	chr1	114710539	114710596	(134245826)	+	GA-rich	Low_complexity	1	59	(0)	197153
224	26.2	3.6	6.1	chr1	115649329	115649442	(133306980)	C	MIRb	SINE/MIR	(118)	150	40	198493
641	25.8	6.6	5.8	chr1	116568467	116568692	(132387730)	+	L2a	LINE/L2	3197	3424	(2)	199911
392	32.8	4.8	7.2	chr1	116568631	116568899	(132387523)	C	MIR	SINE/MIR	(13)	255	2	199917
3417	23.9	9.3	11.2	chr1	117389699	117391590	(131564832)	C	L1MD	LINE/L1	(1973)	4173	2321	201237
648	28.9	1.1	0.6	chr1	117930768	117930948	(131025474)	+	MIR	SINE/MIR	2	183	(79)	202027
1190	18.0	1.5	0.4	chr1	118371521	118371776	(130584646)	C	L1MB7	LINE/L1	(1737)	4409	4151	202669
42	9.2	1.0	8.2	chr1	118371781	118371877	(130584545)	+	(CTTT)n	Simple_repeat	1	98	(0)	202672
3362	20.1	10.7	1.4	chr1	118371950	118372435	(130583987)	C	L1MB7	LINE/L1	(2029)	4111	3579	202669
273	25.7	11.8	0.0	chr1	119633093	119633197	(129323225)	C	MIR3	SINE/MIR	(35)	173	55	204313
409	32.9	9.4	1.8	chr1	119773551	119773767	(129182655)	C	MIRc	SINE/MIR	(22)	246	12	204519
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
23	22.6	3.6	4.6	chr1	145788721	145788804	(103167618)	+	(TC)n	Simple_repeat	1	87	(0)	211521
534	28.7	6.8	3.5	chr1	145963719	145963947	(102992475)	C	MIRb	SINE/MIR	(15)	253	18	211832
811	17.4	3.9	0.7	chr1	145990823	145990971	(102965451)	C	AluJr4	SINE/Alu	(0)	312	159	211887
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
283	20.7	1.2	4.7	chr1	147892956	147893041	(101063381)	C	MIRb	SINE/MIR	(60)	208	126	214798
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
13	13.0	5.6	2.6	chr1	150376231	150376266	(98580156)	+	(TCTC)n	Simple_repeat	1	38	(0)	218903
236	27.2	8.0	3.7	chr1	151131012	151131118	(97825304)	C	MIRc	SINE/MIR	(112)	156	45	220587
327	8.7	0.0	0.0	chr1	151396723	151396768	(97559654)	+	Alu	SINE/Alu	1	46	(87)	221132
60	16.2	2.2	7.1	chr1	151396775	151396953	(97559469)	+	(TTCC)n	Simple_repeat	1	183	(0)	221133
2206	13.3	0.0	1.3	chr1	151396957	151397271	(97559151)	C	AluSx	SINE/Alu	(1)	311	1	221134
26	29.3	2.5	5.4	chr1	151477208	151477369	(97479053)	+	(TTTCTTC)n	Simple_repeat	1	166	(0)	221290
23	16.4	4.8	5.7	chr1	151477295	151477378	(97479044)	+	(TTTC)n	Simple_repeat	1	88	(0)	221291
2825	15.9	2.6	0.2	chr1	151555802	151556298	(97400124)	C	L1MD1	LINE/L1	(31)	6211	5703	221468
47	15.4	2.7	3.5	chr1	151556301	151556319	(97400103)	+	(TTCCC)n	Simple_repeat	1	127	(0)	221469
30	26.6	1.8	3.6	chr1	151556320	151556429	(97399993)	+	(TCCCC)n	Simple_repeat	1	112	(0)	221470
1245	20.6	1.6	2.3	chr1	151556431	151556687	(97399735)	C	AluJb	SINE/Alu	(34)	278	24	221471
2655	15.6	3.1	1.9	chr1	151936249	151936724	(97019698)	+	LTR15	LTR/ERV1	1	482	(11)	222147
13	4.5	0.0	7.4	chr1	151945813	151945839	(97010583)	+	(AACA)n	Simple_repeat	1	27	(0)	222171
310	32.7	10.7	6.0	chr1	151972727	151972993	(96983429)	C	L2b	LINE/L2	(1)	3425	3145	222206
1607	15.3	2.2	0.4	chr1	153659766	153660033	(95296389)	C	AluJb	SINE/Alu	(38)	274	2	224487
2309	11.2	0.7	0.0	chr1	153890905	153891209	(95065213)	+	AluSx1	SINE/Alu	4	310	(2)	224989
29	24.3	5.5	0.9	chr1	153891210	153891286	(95065136)	+	A-rich	Low_complexity	1	83	(0)	224990
2244	11.5	0.0	1.9	chr1	153891287	153891629	(95064793)	+	AluSq	SINE/Alu	2	313	(0)	224991
1986	9.9	0.0	4.5	chr1	154608330	154608641	(94347781)	C	AluSz	SINE/Alu	(14)	298	1	226476
2479	8.7	0.0	0.0	chr1	154973229	154973559	(93982863)	+	AluSq2	SINE/Alu	1	313	(0)	227128
1446	12.3	2.9	2.1	chr1	154975848	154976087	(93980335)	+	L1PREC2	LINE/L1	5908	6149	(11)	227130
17	32.0	3.0	2.9	chr1	155002310	155002409	(93954013)	+	G-rich	Low_complexity	1	103	(0)	227187
491	27.7	9.9	6.8	chr1	155050162	155050377	(93906045)	+	MIRc	SINE/MIR	3	221	(47)	227263
19	22.2	3.1	3.0	chr1	155813829	155813892	(93142530)	+	GA-rich	Low_complexity	1	66	(0)	228854
27	21.9	0.0	0.0	chr1	155914531	155914584	(93041838)	+	A-rich	Low_complexity	1	54	(0)	229092
13	10.7	6.7	0.0	chr1	155914639	155914668	(93041754)	+	A-rich	Low_complexity	1	32	(0)	229092
15	28.1	2.8	2.7	chr1	156075768	156075839	(92880583)	+	A-rich	Low_complexity	1	74	(0)	229429
454	27.5	8.9	0.0	chr1	156122168	156122339	(92834083)	+	MIR3	SINE/MIR	6	187	(21)	229535
2504	15.9	3.7	0.7	chr1	156773685	156774134	(92182288)	+	L1MB4	LINE/L1	5567	6030	(150)	230729
1748	18.5	1.9	0.3	chr1	157959609	157959911	(90996511)	+	AluJb	SINE/Alu	5	312	(0)	232416
45	14.5	0.0	4.3	chr1	157959912	157960005	(90996417)	+	A-rich	Low_complexity	1	94	(0)	232417
298	20.0	16.7	0.0	chr1	157960006	157960090	(90996332)	+	MIRb	SINE/MIR	24	125	(143)	232418
410	31.3	3.4	1.2	chr1	158012128	158012286	(90944136)	+	MIR3	SINE/MIR	21	173	(35)	232504
676	33.5	9.2	6.1	chr1	159797387	159797930	(89158492)	C	L2c	LINE/L2	(833)	2586	2024	234768
14	19.9	2.4	2.3	chr1	160207327	160207368	(88749054)	+	GA-rich	Low_complexity	1	43	(0)	235410
28	31.7	2.4	3.1	chr1	160267368	160267513	(88688909)	+	(CTTC)n	Simple_repeat	1	144	(0)	235497
2034	15.5	1.3	0.0	chr1	160267514	160267817	(88688605)	C	AluSx1	SINE/Alu	(2)	310	3	235498
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
321	31.8	6.6	10.4	chr1	161376496	161376651	(87579771)	+	L1M5	LINE/L1	2769	2904	(3310)	237414
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
195	20.3	9.8	9.8	chr1	161962576	161962657	(86993765)	+	MamRTE1	LINE/RTE-BovB	1989	2070	(1742)	238385
1684	13.9	0.0	15.9	chr1	162081545	162081903	(86874519)	C	AluJb	SINE/Alu	(10)	302	1	238569
334	27.3	2.4	4.0	chr1	164596114	164596239	(84360183)	+	MamRep1151	LTR?	586	709	(0)	242371
202	18.9	2.8	5.0	chr1	165974737	165975305	(82981117)	+	(CCTT)n	Simple_repeat	1	585	(0)	244629
216	32.0	6.2	1.3	chr1	167277004	167277079	(81679343)	+	L2	LINE/L2	1968	2047	(1372)	246457
658	0.0	0.0	0.0	chr1	167715488	167715559	(81240863)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	247182
445	34.9	5.6	1.9	chr1	168149129	168149283	(80807139)	+	MIRb	SINE/MIR	14	174	(94)	247888
512	32.3	15.3	3.6	chr1	168179861	168180632	(80775790)	C	L2c	LINE/L2	(359)	3060	2183	247956
248	18.9	17.2	3.6	chr1	168180695	168180804	(80775618)	C	L1ME4a	LINE/L1	(31)	6093	5966	247957
491	33.7	10.2	2.9	chr1	168619102	168619517	(80336905)	+	L2	LINE/L2	1546	1995	(1424)	248652
75	11.3	7.7	2.5	chr1	168725179	168725363	(80231059)	+	(TTCCT)n	Simple_repeat	1	194	(0)	248814
310	28.4	1.7	2.5	chr1	169561672	169561790	(79394632)	+	LTR85a	LTR/Gypsy?	31	148	(554)	250110
39	17.1	5.9	4.9	chr1	169561892	169562027	(79394395)	+	(TCCTT)n	Simple_repeat	1	144	(0)	250111
2529	27.6	7.5	1.5	chr1	174659250	174659914	(74296508)	+	L2a	LINE/L2	1877	2592	(827)	257482
31	3.1	0.0	0.0	chr1	174799759	174799791	(74156631)	+	(GCA)n	Simple_repeat	1	33	(0)	257708
1984	15.5	0.0	4.0	chr1	174940255	174940577	(74015845)	C	AluJo	SINE/Alu	(2)	310	1	257965
44	17.4	7.3	0.8	chr1	180085020	180085142	(68871280)	+	(TTCCTCT)n	Simple_repeat	1	132	(0)	265844
19	18.8	3.3	3.2	chr1	180575013	180575069	(68381353)	+	(TCTCT)n	Simple_repeat	1	57	(0)	266595
98	0.0	2.9	1.9	chr1	180575070	180575174	(68381248)	+	(TCTT)n	Simple_repeat	1	108	(0)	266596
16566	16.3	2.9	1.5	chr1	180696210	180699221	(68257201)	C	L1M2	LINE/L1	(1733)	5829	2760	266811
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
20	13.5	1.8	6.9	chr1	181315039	181315095	(67641327)	+	(CTTTCC)n	Simple_repeat	1	58	(0)	267796
16	23.0	0.0	0.0	chr1	182614833	182614873	(66341549)	+	G-rich	Low_complexity	1	41	(0)	269752
230	32.7	11.0	5.8	chr1	182617930	182618101	(66338321)	C	MamRTE1	LINE/RTE-BovB	(3551)	261	80	269759
292	27.2	3.6	0.0	chr1	182889334	182889414	(66067008)	C	L1MEc	LINE/L1	(6198)	202	119	270207
1702	13.6	5.2	4.5	chr1	182889607	182889893	(66066529)	C	AluJb	SINE/Alu	(20)	292	4	270208
465	30.2	8.9	5.1	chr1	183444252	183444607	(65511815)	+	LTR103b_Mam	LTR/ERV1?	120	490	(58)	271136
17	9.7	2.9	2.8	chr1	183805083	183805117	(65151305)	+	(GCTC)n	Simple_repeat	1	36	(0)	271671
23	34.3	3.8	0.0	chr1	183943439	183943544	(65012878)	+	GA-rich	Low_complexity	1	110	(0)	271871
409	8.2	1.7	0.6	chr1	184022318	184022387	(64934035)	+	MSTD	LTR/ERVL-MaLR	3	76	(332)	271977
113	5.6	8.4	1.7	chr1	184351647	184351862	(64604560)	+	A-rich	Low_complexity	1	230	(0)	272490
17	23.1	3.1	3.0	chr1	184436650	184436713	(64519709)	+	(CTTTCC)n	Simple_repeat	1	66	(0)	272651
396	32.5	9.5	3.5	chr1	184436714	184437000	(64519422)	C	L2a	LINE/L2	(9)	3417	3112	272652
919	19.9	3.3	9.2	chr1	184954938	184955296	(64001126)	C	MER33	DNA/hAT-Charlie	(4)	320	7	273486
61	4.6	0.0	0.0	chr1	184955298	184955365	(64001057)	+	(TTTCC)n	Simple_repeat	1	68	(0)	273487
2003	8.2	7.9	0.4	chr1	184955366	184955634	(64000788)	C	AluSc	SINE/Alu	(16)	293	3	273488
15	19.4	3.2	6.2	chr1	185536662	185536723	(63419699)	+	(CCTTT)n	Simple_repeat	1	64	(0)	274403
12	19.4	4.7	2.2	chr1	185536703	185536745	(63419677)	+	(TTTACT)n	Simple_repeat	1	45	(0)	274404
204	43.8	4.5	0.0	chr1	193033780	193033907	(55922515)	C	L2b	LINE/L2	(221)	3166	3033	284244
23	24.3	4.1	4.0	chr1	197915793	197915889	(51040533)	+	(TTCC)n	Simple_repeat	1	101	(0)	290527
189	22.4	1.2	3.1	chr1	200505163	200505645	(48450777)	+	GA-rich	Low_complexity	1	489	(0)	294401
1979	9.5	0.0	6.4	chr1	202789236	202789531	(46166891)	+	AluSx1	SINE/Alu	1	277	(35)	298485
618	24.9	20.1	1.3	chr1	202789699	202789931	(46166491)	+	AluJr	SINE/Alu	2	289	(23)	298486
933	13.6	5.2	3.0	chr1	203547925	203548093	(45408329)	+	AluJr	SINE/Alu	136	308	(4)	299807
545	30.3	4.5	9.1	chr1	203548109	203548279	(45408143)	+	MIRb	SINE/MIR	20	187	(81)	299808
2319	18.6	5.6	4.2	chr1	203599930	203600455	(45355967)	C	MER41A	LTR/ERV1	(20)	534	1	299917
15	20.3	4.4	0.0	chr1	203626534	203626582	(45329840)	+	(CACCCA)n	Simple_repeat	1	51	(0)	299984
133	17.7	2.7	3.8	chr1	203937629	203937990	(45018432)	+	A-rich	Low_complexity	1	358	(0)	300633
15	29.4	6.0	2.2	chr1	205472799	205472903	(43483519)	+	GA-rich	Low_complexity	1	108	(0)	303502
370	33.5	9.7	1.6	chr1	205528453	205528698	(43427724)	+	Charlie16a	DNA/hAT-Charlie	75	342	(0)	303610
26	13.6	0.0	0.0	chr1	206039651	206039691	(42916731)	+	(A)n	Simple_repeat	1	41	(0)	304470
2102	12.4	1.3	1.9	chr1	206666421	206666599	(42289823)	C	AluSx	SINE/Alu	(0)	312	134	305482
485	29.6	12.1	1.4	chr1	206762824	206763070	(42193352)	C	L1MC4	LINE/L1	(4986)	1229	985	305658
17	24.5	2.3	0.0	chr1	207010312	207010355	(41946067)	+	(CT)n	Simple_repeat	1	45	(0)	306075
244	28.7	0.0	0.0	chr1	208134537	208134623	(40821799)	+	MER127	DNA/TcMar-Tigger	1	87	(277)	307654
301	32.0	0.0	3.9	chr1	208603124	208603276	(40353146)	+	L2c	LINE/L2	3241	3387	(0)	308399
1939	13.2	4.7	0.0	chr1	211196120	211196200	(37760222)	+	MER1B	DNA/hAT-Charlie	226	317	(22)	312248
1763	21.2	10.1	1.5	chr1	211196214	211196745	(37759677)	+	L1M4a1	LINE/L1	1075	1657	(922)	312247
14	16.2	0.0	5.3	chr1	211330480	211330517	(37625905)	+	(TCCC)n	Simple_repeat	1	38	(0)	312513
14966	11.4	3.4	5.2	chr1	211841349	211843811	(37112611)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	4	313489
2152	22.5	12.4	1.8	chr1	212031979	212032479	(36923943)	+	L2a	LINE/L2	2384	2934	(485)	313805
2403	8.1	0.7	1.0	chr1	212032480	212032777	(36923645)	C	AluY	SINE/Alu	(13)	298	2	313806
343	26.5	7.6	7.6	chr1	212039383	212039565	(36916857)	C	Charlie2b	DNA/hAT-Charlie	(2485)	297	115	313814
3359	14.4	5.7	0.9	chr1	212039566	212040232	(36916190)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	530	313815
22	20.9	0.0	0.0	chr1	212567134	212567174	(36389248)	+	(T)n	Simple_repeat	1	41	(0)	314770
950	17.4	1.1	0.0	chr1	212857841	212858012	(36098410)	+	MER41D	LTR/ERV1	384	557	(0)	315327
271	36.2	8.2	4.4	chr1	212967425	212967857	(35988565)	C	L2c	LINE/L2	(433)	2986	2536	315514
354	29.9	22.0	2.2	chr1	212967914	212968358	(35988064)	C	L2	LINE/L2	(723)	2696	2139	315516
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
343	25.3	5.4	7.1	chr1	214282189	214282353	(34674069)	C	MIR3	SINE/MIR	(0)	230	54	317489
622	35.1	1.3	2.4	chr1	214439734	214440110	(34516312)	C	CR1_Mam	LINE/CR1	(612)	1592	1220	317695
12	12.2	3.7	0.0	chr1	214585173	214585199	(34371223)	+	(CTTT)n	Simple_repeat	1	28	(0)	317936
16	15.9	0.0	0.0	chr1	214658443	214658470	(34297952)	+	(T)n	Simple_repeat	1	28	(0)	318030
353	29.9	10.3	7.7	chr1	219174483	219174804	(29781618)	+	L2b	LINE/L2	3061	3385	(2)	324251
14	26.7	0.0	2.0	chr1	220271814	220271864	(28684558)	+	G-rich	Low_complexity	1	51	(0)	325956
16	0.0	0.0	0.0	chr1	221184407	221184424	(27771998)	+	(A)n	Simple_repeat	1	18	(0)	327281
15	13.9	0.0	0.0	chr1	221184484	221184507	(27771915)	+	(AG)n	Simple_repeat	1	24	(0)	327282
485	28.1	9.1	1.2	chr1	223702823	223703074	(25253348)	C	L2b	LINE/L2	(1201)	2218	1945	331057
46	6.5	3.1	0.0	chr1	223707237	223707300	(25249122)	+	(TC)n	Simple_repeat	1	66	(0)	331075
52	21.2	2.4	4.7	chr1	223708764	223708908	(25247514)	+	GA-rich	Low_complexity	20	161	(0)	331080
1072	21.4	6.2	10.1	chr1	223708911	223709248	(25247174)	C	MER92A	LTR/ERV1	(61)	351	28	331081
12	9.2	0.0	4.0	chr1	223726557	223726581	(25229841)	+	(CCCT)n	Simple_repeat	1	25	(0)	331118
846	14.0	9.1	2.0	chr1	224164715	224164867	(24791555)	+	MER5A1	DNA/hAT-Charlie	2	166	(0)	331926
15	18.4	3.5	3.5	chr1	224164945	224164993	(24791429)	+	GA-rich	Low_complexity	1	49	(0)	331927
97	16.8	3.4	0.7	chr1	224172321	224172588	(24783834)	+	GA-rich	Low_complexity	1	275	(0)	331948
35	2.5	2.4	0.0	chr1	224204729	224204769	(24751653)	+	(CAATATATTC)n	Simple_repeat	1	42	(0)	332037
352	21.1	2.6	0.0	chr1	224276814	224276889	(24679533)	C	MADE2	DNA/TcMar-Mariner	(0)	80	3	332216
20	0.0	0.0	0.0	chr1	224457512	224457533	(24498889)	+	(T)n	Simple_repeat	1	22	(0)	332598
255	34.4	3.1	0.0	chr1	224618619	224618711	(24337711)	+	MIR3	SINE/MIR	109	204	(4)	332881
14	11.6	3.5	0.0	chr1	224873431	224873459	(24082963)	+	(TCAT)n	Simple_repeat	1	30	(0)	333289
25	21.2	3.8	2.4	chr1	224873458	224873537	(24082885)	+	(TCTCC)n	Simple_repeat	1	83	(0)	333290
16	9.3	0.0	0.0	chr1	225519570	225519592	(23436830)	+	(A)n	Simple_repeat	1	23	(0)	334088
14	23.1	2.2	2.2	chr1	225586269	225586313	(23370109)	+	GA-rich	Low_complexity	1	46	(0)	334187
12	12.6	8.6	0.0	chr1	225586303	225586337	(23370085)	+	A-rich	Low_complexity	1	38	(0)	334188
1040	24.2	9.7	0.5	chr1	225586341	225586743	(23369679)	+	L1ME2z	LINE/L1	3475	3918	(2228)	334178
367	28.0	12.9	3.9	chr1	225602481	225602837	(23353585)	+	L1ME3A	LINE/L1	3865	4258	(1888)	334213
498	29.7	10.6	2.1	chr1	225602844	225603084	(23353338)	+	L1ME3A	LINE/L1	4556	4819	(1327)	334213
847	25.1	3.2	4.5	chr1	225634358	225634578	(23321844)	+	MER20	DNA/hAT-Charlie	2	219	(0)	334270
2156	19.2	7.3	10.9	chr1	225634633	225635222	(23321200)	C	L1M4	LINE/L1	(1208)	4938	4372	334271
419	36.5	5.0	5.3	chr1	225655551	225655911	(23300511)	C	MER130	DNA	(141)	1453	1094	334309
2174	8.6	2.1	0.7	chr1	225781378	225781695	(23174727)	C	AluSq	SINE/Alu	(0)	313	1	334576
309	26.6	16.0	3.7	chr1	225864234	225864397	(23092025)	C	L2a	LINE/L2	(29)	3397	3210	334712
517	30.7	8.1	4.3	chr1	225864461	225864828	(23091594)	C	MamRep434	DNA/TcMar-Tigger	(35)	391	9	334713
6775	11.9	4.0	3.5	chr1	226055657	226056686	(22899736)	C	Tigger1	DNA/TcMar-Tigger	(1164)	1254	192	335113
421	34.2	6.2	9.6	chr1	226074225	226074335	(22882087)	+	L2a	LINE/L2	2599	2701	(718)	335142
2373	9.0	1.0	0.7	chr1	226074336	226074645	(22881777)	C	AluSq2	SINE/Alu	(2)	311	1	335143
238	21.1	11.2	0.0	chr1	226437367	226437437	(22518985)	+	HAL1b	LINE/L1	2268	2347	(74)	335900
17	38.0	1.3	0.0	chr1	226437438	226437516	(22518906)	+	(CTTT)n	Simple_repeat	1	80	(0)	335901
19	19.7	0.0	0.0	chr1	226437482	226437517	(22518905)	+	(T)n	Simple_repeat	1	36	(0)	335902
16	22.5	0.0	0.0	chr1	226509023	226509046	(22447376)	+	(CT)n	Simple_repeat	1	24	(0)	336024
32	0.0	7.3	0.0	chr1	226509047	226509087	(22447335)	+	(TTTC)n	Simple_repeat	1	44	(0)	336025
16	22.5	0.0	0.0	chr1	226509088	226509108	(22447314)	+	(CT)n	Simple_repeat	1	21	(0)	336026
12	24.9	0.0	6.6	chr1	226509109	226509123	(22447299)	+	(CTTC)n	Simple_repeat	3	36	(0)	336027
36	0.0	0.0	0.0	chr1	226509125	226509158	(22447264)	+	(TCCTT)n	Simple_repeat	1	34	(0)	336028
800	15.2	0.0	0.0	chr1	226509160	226509277	(22447145)	C	FLAM_C	SINE/Alu	(15)	128	11	336029
101	3.1	0.0	0.0	chr1	226944693	226944791	(22011631)	+	(GA)n	Simple_repeat	1	99	(0)	336734
1543	26.5	15.8	6.6	chr1	227044433	227045745	(21910677)	C	HAL1	LINE/L1	(4)	2503	1047	336845
3066	13.9	7.5	4.0	chr1	227188441	227189047	(21767375)	+	L1MC1	LINE/L1	5879	6508	(0)	337048
373	26.2	3.0	8.5	chr1	227189039	227189252	(21767170)	C	L1MC5a	LINE/L1	(43)	849	656	337050
3980	25.6	11.6	2.4	chr1	227364382	227365576	(21590846)	C	L2a	LINE/L2	(1284)	2135	784	337381
53	10.4	0.8	8.1	chr1	227365609	227365731	(21590691)	+	GA-rich	Low_complexity	1	124	(0)	337387
2020	18.4	7.6	1.4	chr1	227365775	227366193	(21590229)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	59	337388
181	40.0	7.2	1.4	chr1	227374748	227374970	(21581452)	+	L2b	LINE/L2	2846	3082	(337)	337404
44	21.1	2.4	3.2	chr1	227374975	227375100	(21581322)	+	(TTCT)n	Simple_repeat	1	125	(0)	337405
1565	15.9	0.0	0.0	chr1	227375101	227375327	(21581095)	C	AluJb	SINE/Alu	(1)	311	85	337406
1740	33.2	6.3	8.6	chr1	228130971	228131440	(20824982)	+	ERV24_Prim-int	LTR/ERV1	4131	4624	(2951)	338319
53	23.1	0.7	4.5	chr1	228483921	228484073	(20472349)	+	(TCTT)n	Simple_repeat	1	154	(0)	338790
40	40.6	3.2	0.0	chr1	228484074	228484137	(20472285)	+	(TCTC)n	Simple_repeat	3	226	(0)	338791
6278	15.0	2.8	0.0	chr1	228500001	228501063	(20455359)	C	Tigger1	DNA/TcMar-Tigger	(1294)	1124	31	338818
41	24.7	5.6	3.4	chr1	229271387	229271584	(19684838)	+	(GGCGCGG)n	Simple_repeat	1	209	(0)	339986
15	10.8	3.3	0.0	chr1	229271623	229271652	(19684770)	+	(TTGCTC)n	Simple_repeat	1	31	(0)	339987
13765	12.0	7.7	1.7	chr1	229631010	229631980	(19324442)	C	Tigger1	DNA/TcMar-Tigger	(1408)	1010	1	340625
2431	10.5	0.0	0.6	chr1	229837264	229837578	(19118844)	+	AluSq2	SINE/Alu	1	313	(0)	340992
3211	18.7	14.1	3.2	chr1	229837579	229838208	(19118214)	+	Tigger6a	DNA/TcMar-Tigger	361	1069	(14)	340991
236	33.3	2.9	2.9	chr1	229869940	229870044	(19086378)	+	MER5A	DNA/hAT-Charlie	6	110	(79)	341051
376	8.2	0.0	0.0	chr1	230269140	230269188	(18687234)	C	AluYg6	SINE/Alu	(10)	301	253	341623
74	21.6	0.5	4.5	chr1	230469347	230469544	(18486878)	+	(CCTT)n	Simple_repeat	1	199	(0)	341934
342	22.9	9.4	9.4	chr1	230469576	230469692	(18486730)	C	L1MEd	LINE/L1	(2924)	3222	3120	341931
194	22.9	4.8	1.9	chr1	231047186	231047791	(17908631)	+	(TCCT)n	Simple_repeat	1	635	(0)	342821
902	21.6	0.0	0.0	chr1	231047794	231047955	(17908467)	C	AluJr4	SINE/Alu	(7)	305	144	342822
214	27.8	6.9	6.4	chr1	231408616	231408788	(17547634)	C	L2c	LINE/L2	(8)	3379	3206	343448
559	30.7	6.7	3.8	chr1	231596737	231597024	(17359398)	+	LTR78	LTR/ERV1	955	1251	(53)	343778
24	6.8	0.0	0.0	chr1	231626638	231626668	(17329754)	+	(GT)n	Simple_repeat	1	31	(0)	343832
15	0.0	0.0	0.0	chr1	231626668	231626684	(17329738)	+	(GC)n	Simple_repeat	1	17	(0)	343833
123	23.1	3.2	4.9	chr1	232031107	232031540	(16924882)	+	GA-rich	Low_complexity	1	448	(0)	344404
2760	23.6	5.7	6.2	chr1	232065409	232066534	(16889888)	+	L1ME3	LINE/L1	3986	5199	(947)	344465
4869	15.6	3.8	0.0	chr1	232576185	232576972	(16379450)	+	Tigger1	DNA/TcMar-Tigger	31	849	(1569)	345114
239	26.8	1.0	2.0	chr1	232670638	232670736	(16285686)	+	L2b	LINE/L2	2113	2210	(1209)	345233
3234	25.9	6.1	5.7	chr1	232712922	232714303	(16242119)	C	HAL1	LINE/L1	(194)	2313	926	345310
1503	28.2	2.8	1.0	chr1	232952858	232953272	(16003150)	+	LTR16C	LTR/ERVL	67	489	(0)	345704
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
6221	12.0	5.0	1.4	chr1	234385855	234386641	(14569781)	C	Tigger1	DNA/TcMar-Tigger	(1292)	1126	312	347792
60	6.2	5.7	1.8	chr1	234495839	234495848	(14460574)	+	(CTTTC)n	Simple_repeat	1	111	(0)	347961
31	21.4	1.1	5.2	chr1	234495849	234495943	(14460479)	+	(TTTCTT)n	Simple_repeat	1	96	(0)	347962
2348	13.0	0.0	1.3	chr1	234495946	234496295	(14460127)	C	AluSx1	SINE/Alu	(0)	312	1	347963
18	12.0	0.0	0.0	chr1	234607054	234607080	(14349342)	+	(AT)n	Simple_repeat	1	27	(0)	348162
2007	20.5	5.1	1.1	chr1	234634050	234634497	(14321925)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	348202
470	29.6	5.3	6.1	chr1	234680390	234680434	(14275988)	C	L2a	LINE/L2	(200)	3226	3183	348271
93	18.4	4.7	3.8	chr1	234680436	234680713	(14275709)	+	A-rich	Low_complexity	1	291	(0)	348273
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
2494	8.2	0.0	0.0	chr1	234737617	234737920	(14218502)	+	AluSg	SINE/Alu	1	304	(6)	348353
30	7.9	5.6	0.0	chr1	234738030	234738083	(14218339)	+	(GAGAGAG)n	Simple_repeat	1	57	(0)	348354
27	15.5	3.9	3.8	chr1	234738084	234738097	(14218325)	+	GA-rich	Low_complexity	28	80	(0)	348355
93	6.8	3.4	1.3	chr1	234740975	234741120	(14215302)	+	(AAGA)n	Simple_repeat	1	151	(0)	348364
1540	26.3	15.0	2.7	chr1	234741121	234741714	(14214708)	C	L2a	LINE/L2	(353)	3066	2387	348361
16	5.3	0.0	0.0	chr1	234746083	234746102	(14210320)	+	(AG)n	Simple_repeat	1	20	(0)	348372
19	15.5	2.8	0.0	chr1	234962246	234962281	(13994141)	+	GA-rich	Low_complexity	1	37	(0)	348743
254	30.6	2.7	1.4	chr1	235105422	235105494	(13850928)	C	L2a	LINE/L2	(20)	3406	3333	349043
660	20.6	5.1	10.5	chr1	235254611	235254954	(13701468)	+	L1ME3G	LINE/L1	1	264	(660)	349325
1868	15.2	0.7	5.0	chr1	235301993	235302132	(13654290)	C	AluJb	SINE/Alu	(179)	133	2	349441
57	16.8	6.0	2.8	chr1	235302145	235302367	(13654055)	+	GA-rich	Low_complexity	1	230	(0)	349443
12	25.6	0.0	0.0	chr1	235325366	235325399	(13631023)	+	A-rich	Low_complexity	1	34	(0)	349499
594	27.6	20.0	2.0	chr1	235411759	235412157	(13544265)	+	L2	LINE/L2	1723	2211	(1208)	349695
3132	18.3	6.4	5.6	chr1	235872932	235873178	(13083244)	C	MER39	LTR/ERV1	(441)	266	1	350522
2099	12.4	0.0	2.0	chr1	236098036	236098334	(12858088)	+	AluSz	SINE/Alu	1	293	(19)	350997
132	5.0	8.4	1.6	chr1	236098335	236098572	(12857850)	+	(GGAAG)n	Simple_repeat	1	258	(0)	350998
1646	12.2	2.1	0.0	chr1	236285073	236285301	(12671121)	C	AluSx	SINE/Alu	(2)	310	77	351308
82	22.9	3.2	2.8	chr1	236502850	236503096	(12453326)	+	A-rich	Low_complexity	1	255	(0)	351773
1969	17.4	0.7	0.0	chr1	236516211	236516520	(12439902)	+	AluJb	SINE/Alu	1	312	(0)	351807
26	24.1	4.0	3.8	chr1	236516523	236516623	(12439799)	+	GA-rich	Low_complexity	1	105	(0)	351808
190	22.8	3.4	5.0	chr1	236530607	236530666	(12425756)	+	L2	LINE/L2	2450	2508	(911)	351835
2718	17.3	6.5	0.8	chr1	236531788	236532311	(12424111)	C	MER68	LTR/ERVL	(7)	556	1	351838
4604	14.0	6.1	1.3	chr1	237237350	237237905	(11718517)	+	MER4D	LTR/ERV1	1	593	(310)	352990
56	0.0	0.0	8.5	chr1	237237906	237237987	(11718435)	+	(TTTCC)n	Simple_repeat	1	82	(0)	352991
1657	11.7	5.0	6.0	chr1	237237989	237238270	(11718152)	C	AluJb	SINE/Alu	(33)	279	1	352992
17	6.5	2.9	2.9	chr1	237507146	237507179	(11449243)	+	(TGAAAA)n	Simple_repeat	1	35	(0)	353430
13	14.0	7.3	0.0	chr1	238579686	238579710	(10376712)	+	(CTTTC)n	Simple_repeat	1	27	(0)	354889
2487	9.1	0.0	0.0	chr1	238579711	238580019	(10376403)	C	AluSc	SINE/Alu	(0)	309	1	354890
16	13.2	0.0	0.0	chr1	239607081	239607105	(9349317)	+	(T)n	Simple_repeat	1	25	(0)	356399
184	33.9	21.3	0.8	chr1	240187380	240187498	(8768924)	+	MIR3	SINE/MIR	38	187	(21)	357293
43	20.6	0.9	2.8	chr1	240323099	240323221	(8633201)	+	(CTTTTT)n	Simple_repeat	1	120	(0)	357463
1971	12.4	0.4	0.4	chr1	240323222	240323494	(8632928)	C	AluSx1	SINE/Alu	(39)	273	1	357464
245	32.5	6.8	3.1	chr1	240651079	240651164	(8305258)	+	MIR3	SINE/MIR	77	171	(37)	358017
443	21.4	13.8	0.0	chr1	240651165	240651276	(8305146)	C	MER94	DNA/hAT-Blackjack	(1)	133	4	358018
440	29.5	5.5	1.3	chr1	240656399	240656556	(8299866)	+	MIRb	SINE/MIR	88	252	(16)	358030
64	16.8	2.0	3.9	chr1	243912414	243912564	(5043858)	+	A-rich	Low_complexity	1	154	(0)	363296
222	11.0	11.0	12.1	chr1	243912596	243912678	(5043744)	C	L2	LINE/L2	(1890)	1529	1448	363297
629	24.9	2.0	6.3	chr1	244231625	244231830	(4724592)	C	UCON1	Unknown	(924)	462	266	363781
277	31.1	6.2	3.9	chr1	244448827	244448953	(4507469)	+	L2c	LINE/L2	3256	3385	(2)	364207
1258	27.2	12.4	2.2	chr1	244665908	244666449	(4289973)	+	L2c	LINE/L2	1187	1791	(1628)	364527
2176	7.2	0.7	0.0	chr1	244833995	244834271	(4122151)	C	AluSq4	SINE/Alu	(31)	280	2	364891
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
928	22.9	2.0	2.0	chr1	245019064	245019312	(3937110)	C	Charlie26a	DNA/hAT-Charlie	(13)	312	64	365303
4862	14.9	2.9	2.1	chr1	245270397	245271413	(3685009)	C	L1M4c	LINE/L1	(630)	5760	4729	365779
423	19.7	12.9	1.6	chr10	477696	477819	(133319603)	+	L1MC4	LINE/L1	1095	1234	(4981)	371562
320	33.6	9.0	0.4	chr10	1074888	1075141	(132722281)	+	Charlie23a	DNA/hAT-Charlie	61	338	(1)	372259
245	21.9	8.6	1.5	chr10	1075183	1075247	(132722175)	+	MIR1_Amn	SINE/MIR	99	168	(62)	372260
6779	10.2	2.4	2.8	chr10	3061469	3062440	(130734982)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	374573
49	6.6	3.5	3.3	chr10	3653432	3653518	(130143904)	+	(TTTCT)n	Simple_repeat	1	90	(0)	375376
2161	13.7	1.6	0.0	chr10	3653520	3653825	(130143597)	C	AluSq2	SINE/Alu	(0)	313	3	375377
16	17.4	6.5	0.0	chr10	4651915	4651960	(129145462)	+	(CATTTT)n	Simple_repeat	1	49	(0)	376755
318	28.3	0.8	2.4	chr10	5413525	5413647	(128383775)	C	L2-3_Crp	LINE/L2	(1138)	958	838	377735
15	22.2	3.2	4.6	chr10	5663179	5663241	(128134181)	+	GA-rich	Low_complexity	1	65	(0)	378088
12	5.5	0.0	0.0	chr10	6050788	6050806	(127746616)	+	(AGG)n	Simple_repeat	1	19	(0)	378807
259	17.8	1.1	2.5	chr10	6404368	6404903	(127392519)	+	(TTCT)n	Simple_repeat	1	528	(0)	379456
13	23.1	5.6	1.8	chr10	11013238	11013291	(122784131)	+	A-rich	Low_complexity	1	57	(0)	386428
320	26.8	9.6	11.4	chr10	11501805	11501977	(122295445)	+	Tigger16a	DNA/TcMar-Tigger	395	558	(399)	386967
1155	14.5	6.3	0.0	chr10	11602645	11602837	(122194585)	+	Tigger4a	DNA/TcMar-Tigger	31	236	(0)	387136
310	22.8	7.0	5.2	chr10	13163951	13164103	(120633319)	C	L2	LINE/L2	(702)	2717	2562	390214
8270	13.0	7.5	1.4	chr10	13213874	13214729	(120582693)	+	Tigger1	DNA/TcMar-Tigger	24	966	(1452)	390306
2087	8.1	0.0	1.5	chr10	13777792	13778087	(120019335)	C	AluSg	SINE/Alu	(0)	310	14	391331
258	25.2	12.8	6.1	chr10	13778192	13778322	(120019100)	C	MIRc	SINE/MIR	(13)	255	115	391332
13	9.7	9.1	0.0	chr10	13971948	13971980	(119825442)	+	(CCTCAC)n	Simple_repeat	1	36	(0)	391714
811	14.4	0.0	0.0	chr10	14410064	14410195	(119387227)	C	L1M5	LINE/L1	(722)	5457	5326	392408
45	20.5	4.0	3.9	chr10	14410196	14410239	(119387183)	+	GA-rich	Low_complexity	1	60	(95)	392409
15	19.5	0.0	2.6	chr10	14410240	14410277	(119387145)	+	G-rich	Low_complexity	1	38	(0)	392410
45	20.5	4.0	3.9	chr10	14410278	14410344	(119387078)	+	GA-rich	Low_complexity	61	155	(0)	392409
321	36.8	2.6	0.5	chr10	14410346	14410531	(119386891)	+	MIRb	SINE/MIR	23	212	(56)	392411
83	28.9	1.2	0.8	chr10	14604707	14604958	(119192464)	+	(CT)n	Simple_repeat	1	255	(0)	392731
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
2007	9.4	2.6	0.4	chr10	15135953	15136219	(118661203)	+	AluSq2	SINE/Alu	9	281	(32)	393690
84	30.1	5.9	0.0	chr10	15136220	15136478	(118660944)	+	GA-rich	Low_complexity	102	375	(0)	393691
12	27.1	0.0	2.3	chr10	15348856	15348898	(118448524)	+	(TTTCA)n	Simple_repeat	1	43	(0)	394095
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
75	14.4	8.1	2.9	chr10	15546676	15546897	(118250525)	+	A-rich	Low_complexity	1	240	(0)	394456
46	26.6	3.7	5.0	chr10	15762227	15762321	(118035101)	+	(TTTC)n	Simple_repeat	3	186	(0)	394777
37	7.7	7.7	4.1	chr10	15762322	15762412	(118035010)	+	(CTTCTTT)n	Simple_repeat	1	98	(0)	394778
44	28.6	3.4	4.6	chr10	15762414	15762425	(118034997)	+	(TTTTC)n	Simple_repeat	3	199	(0)	394779
2021	13.6	4.8	0.0	chr10	15762445	15762723	(118034699)	C	AluSz	SINE/Alu	(19)	293	1	394780
363	31.7	11.2	7.0	chr10	15870765	15871123	(117926299)	+	L1MEd	LINE/L1	8	383	(6703)	394923
16	11.9	2.5	4.9	chr10	15871137	15871176	(117926246)	+	(AATA)n	Simple_repeat	1	41	(0)	394924
1424	27.6	4.3	0.3	chr10	15871181	15871761	(117925661)	C	L1MEd	LINE/L1	(5601)	1502	898	394917
137	24.5	3.1	1.2	chr10	16297026	16297415	(117500007)	+	A-rich	Low_complexity	1	402	(0)	395535
398	15.8	4.7	0.0	chr10	17200616	17200697	(116596725)	+	L2a	LINE/L2	3337	3422	(4)	396959
242	28.4	18.9	1.3	chr10	17200826	17200982	(116596440)	C	MIRb	SINE/MIR	(1)	267	77	396960
208	25.4	0.0	2.7	chr10	18135440	18135512	(115661910)	+	MIRc	SINE/MIR	176	246	(22)	398580
1435	9.0	0.8	11.6	chr10	18555341	18563565	(115233857)	+	(GAATG)n	Satellite	1	8290	(0)	399308
1932	8.9	0.5	11.4	chr10	18563574	18573516	(115223906)	+	(TTCCA)n	Simple_repeat	1	9997	(0)	399309
20	36.9	2.7	4.0	chr10	21243875	21244020	(112553402)	+	A-rich	Low_complexity	1	150	(0)	403219
2280	11.6	1.3	0.0	chr10	22928946	22929248	(110868174)	+	AluSx1	SINE/Alu	2	308	(4)	406003
32	25.1	2.4	4.7	chr10	22929249	22929357	(110868065)	+	A-rich	Low_complexity	14	122	(0)	406004
234	19.2	9.9	0.0	chr10	22929382	22929454	(110867968)	+	L1ME4a	LINE/L1	6031	6111	(13)	406001
350	8.6	1.8	8.7	chr10	23330962	23331762	(110465660)	+	G-rich	Low_complexity	1	815	(0)	406629
271	21.1	5.3	6.6	chr10	23422841	23422916	(110374506)	+	FRAM	SINE/Alu	72	146	(20)	406860
22	23.1	6.7	2.1	chr10	23422917	23423006	(110374416)	+	G-rich	Low_complexity	1	96	(0)	406861
106	1.3	8.8	1.1	chr10	24758350	24758509	(109038913)	+	(TTTC)n	Simple_repeat	1	174	(0)	409052
498	30.8	5.9	7.1	chr10	24758510	24758539	(109038883)	C	L1M6	LINE/L1	(5524)	972	943	409051
2166	10.6	1.3	0.3	chr10	24758540	24758842	(109038580)	C	AluSz6	SINE/Alu	(1)	311	6	409053
60	30.0	1.7	3.9	chr10	24866779	24867060	(108930362)	+	GA-rich	Low_complexity	1	275	(0)	409287
704	18.6	4.4	0.0	chr10	26341529	26341657	(107455765)	+	AluJr	SINE/Alu	177	311	(1)	411467
106	34.2	2.6	3.4	chr10	26341658	26342202	(107455220)	+	A-rich	Low_complexity	1	559	(0)	411468
19	4.3	0.0	0.0	chr10	27556827	27556850	(106240572)	+	(TG)n	Simple_repeat	1	24	(0)	413630
107	36.3	1.9	2.8	chr10	27752972	27753498	(106043924)	+	(TCCC)n	Simple_repeat	1	537	(0)	413928
13	24.9	2.0	2.0	chr10	28171292	28171340	(105626082)	+	A-rich	Low_complexity	1	50	(0)	414579
286	31.1	12.9	0.9	chr10	28293706	28293916	(105503506)	C	L2a	LINE/L2	(5)	3421	3182	414788
1935	8.0	5.2	5.2	chr10	28294026	28294314	(105503108)	+	AluY	SINE/Alu	1	289	(22)	414789
1708	17.3	0.0	1.8	chr10	28346699	28346971	(105450451)	+	AluJb	SINE/Alu	1	268	(44)	414890
88	1.1	2.2	0.0	chr10	28346972	28347060	(105450362)	+	(GAAAG)n	Simple_repeat	1	91	(0)	414891
66	11.9	2.3	3.0	chr10	28347065	28347193	(105450229)	+	GA-rich	Low_complexity	1	132	(0)	414892
1528	17.7	0.0	1.5	chr10	28359318	28359582	(105437840)	+	AluJr	SINE/Alu	44	304	(8)	414916
71	0.0	0.0	0.0	chr10	28359584	28359646	(105437776)	+	(GGAAA)n	Simple_repeat	1	63	(0)	414917
2133	12.0	0.0	0.0	chr10	28359696	28360033	(105437389)	C	AluSx1	SINE/Alu	(0)	312	1	414918
2189	9.7	0.3	0.3	chr10	28382245	28382532	(105414890)	C	AluSx	SINE/Alu	(16)	296	9	414966
1972	12.7	1.0	1.7	chr10	28531889	28532180	(105265242)	+	AluJr	SINE/Alu	2	291	(21)	415305
1706	20.7	2.9	1.6	chr10	29203159	29203463	(104593959)	+	AluJr	SINE/Alu	1	309	(3)	416491
69	24.3	2.1	4.9	chr10	29203471	29203708	(104593714)	+	GA-rich	Low_complexity	1	243	(0)	416492
40	20.1	5.3	2.9	chr10	29780777	29780807	(104016615)	+	(TTCCT)n	Simple_repeat	1	118	(66)	417447
33	25.6	4.5	2.9	chr10	29780808	29780941	(104016481)	+	(TTCCC)n	Simple_repeat	1	140	(0)	417448
1580	18.0	5.0	0.3	chr10	30083746	30084028	(103713394)	+	AluJo	SINE/Alu	1	297	(15)	418015
57	23.0	3.5	4.4	chr10	30084040	30084238	(103713184)	+	GA-rich	Low_complexity	1	206	(0)	418016
13	31.6	3.5	5.1	chr10	30170293	30170406	(103627016)	+	GA-rich	Low_complexity	1	118	(0)	418172
297	20.8	6.5	0.0	chr10	30438682	30438753	(103358669)	+	MIR3	SINE/MIR	110	186	(22)	418710
12	19.4	0.0	5.1	chr10	30688578	30688616	(103108806)	+	(TCCCTT)n	Simple_repeat	1	39	(0)	419206
226	34.0	23.0	4.6	chr10	31865170	31865593	(101931829)	C	L2	LINE/L2	(557)	2862	2355	420878
277	30.2	10.0	11.3	chr10	32951555	32951898	(100845524)	C	Tigger19b	DNA/TcMar-Tigger	(155)	395	57	422518
235	14.8	6.2	1.4	chr10	34462857	34463400	(99334022)	+	GA-rich	Low_complexity	1	578	(0)	424752
1739	19.5	0.3	0.3	chr10	34745080	34745381	(99052041)	+	AluJr	SINE/Alu	1	302	(10)	425203
30	24.1	1.6	6.5	chr10	34745382	34745503	(99051919)	+	GA-rich	Low_complexity	1	124	(0)	425204
1493	10.9	0.0	0.0	chr10	35240257	35240458	(98556964)	C	AluSx3	SINE/Alu	(0)	311	110	426243
579	29.6	7.7	0.0	chr10	35421862	35422077	(98375345)	C	MIR	SINE/MIR	(26)	236	3	426563
14	4.5	0.0	4.0	chr10	35635626	35635650	(98161772)	+	(TGAA)n	Simple_repeat	1	25	(0)	426866
447	23.4	1.1	0.0	chr10	44333767	44333860	(89463562)	+	Tigger7	DNA/TcMar-Tigger	2397	2491	(0)	434731
12	16.3	5.7	0.0	chr10	44333925	44333959	(89463463)	+	GA-rich	Low_complexity	1	37	(0)	434732
461	23.6	12.0	2.6	chr10	44866411	44866468	(88930954)	+	L1MEc	LINE/L1	3320	3373	(2946)	435328
29	18.4	3.1	0.0	chr10	44866471	44866535	(88930887)	+	A-rich	Low_complexity	1	67	(0)	435330
3713	25.7	4.6	6.8	chr10	44866553	44867227	(88930195)	+	L1ME1	LINE/L1	3073	3731	(2415)	435331
293	28.9	6.0	1.0	chr10	45592992	45593095	(88204327)	C	MIR3	SINE/MIR	(24)	184	79	436269
28	28.8	7.3	0.0	chr10	47383888	47384023	(86413399)	+	GA-rich	Low_complexity	1	146	(0)	439114
165	13.6	2.6	3.6	chr10	48654771	48655118	(85142304)	+	(TTTC)n	Simple_repeat	1	357	(0)	440833
204	24.6	2.5	0.0	chr10	49403423	49403934	(84393488)	+	(CTCT)n	Simple_repeat	1	525	(0)	441840
360	28.8	7.6	6.5	chr10	56871001	56871353	(76926069)	+	L1ME3	LINE/L1	3841	4197	(1949)	451997
44	10.0	6.7	1.0	chr10	56871354	56871443	(76925979)	+	A-rich	Low_complexity	1	96	(0)	452000
1005	29.4	8.5	4.3	chr10	56871456	56871995	(76925427)	+	L1ME3	LINE/L1	5596	6160	(2)	451997
1709	20.5	11.2	4.2	chr10	58351970	58352085	(75445337)	C	L1ME3A	LINE/L1	(1168)	4978	4860	454016
14	23.5	1.4	7.1	chr10	58705504	58705572	(75091850)	+	(TCCTT)n	Simple_repeat	1	70	(0)	454502
251	27.8	6.0	9.9	chr10	60732139	60732330	(73065092)	C	L1ME4b	LINE/L1	(2)	890	707	457509
104	36.2	3.9	0.4	chr10	60862498	60862932	(72934490)	+	(CTCT)n	Simple_repeat	1	449	(0)	457741
1999	14.1	0.9	1.8	chr10	65570387	65570726	(68226696)	+	MER61A	LTR/ERV1	1	337	(4)	464914
1677	23.0	4.2	7.1	chr10	65570727	65571292	(68226130)	+	MER61-int	LTR/ERV1	1	549	(4668)	464914
2342	8.9	0.0	0.7	chr10	68813310	68813612	(64983810)	+	AluSq2	SINE/Alu	1	301	(12)	470200
830	14.0	0.0	2.9	chr10	68831915	68832063	(64965359)	C	FLAM_C	SINE/Alu	(0)	143	2	470240
259	23.4	20.0	3.1	chr10	69443321	69443448	(64353974)	+	MIRb	SINE/MIR	104	258	(10)	471610
41	20.1	3.9	3.0	chr10	69443512	69443614	(64353808)	+	(TCCTT)n	Simple_repeat	1	102	(0)	471611
870	15.9	0.0	0.8	chr10	69443615	69443746	(64353676)	C	FLAM_C	SINE/Alu	(10)	133	3	471612
1534	21.4	1.1	0.4	chr10	70162058	70162333	(63635089)	+	AluJo	SINE/Alu	1	278	(34)	472866
67	21.3	3.6	4.4	chr10	70162338	70162551	(63634871)	+	A-rich	Low_complexity	1	212	(0)	472867
2387	17.1	17.4	0.7	chr10	70162682	70163236	(63634186)	+	Tigger1	DNA/TcMar-Tigger	2	668	(1750)	472868
275	11.6	2.3	0.0	chr10	70232747	70232789	(63564633)	+	MIR3	SINE/MIR	113	156	(52)	473005
431	22.6	7.9	18.4	chr10	70273097	70273297	(63524125)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	473086
2353	8.8	2.6	0.0	chr10	70410065	70410361	(63387061)	C	AluSq2	SINE/Alu	(8)	305	1	473412
328	28.5	0.7	0.5	chr10	70960248	70961190	(62836232)	+	(GT)n	Simple_repeat	1	950	(0)	474411
4142	22.8	5.7	5.6	chr10	71100361	71102089	(62695333)	C	L1ME1	LINE/L1	(2672)	3647	1921	474656
43	0.0	0.0	0.0	chr10	71215807	71215843	(62581579)	+	(GT)n	Simple_repeat	1	37	(0)	474806
283	27.4	5.6	0.6	chr10	71216077	71216216	(62581206)	C	MIRc	SINE/MIR	(49)	159	7	474807
557	30.2	5.8	10.0	chr10	71269657	71270067	(62527355)	C	L2a	LINE/L2	(79)	3347	2941	474909
53	3.6	0.0	0.0	chr10	71270341	71270397	(62527025)	+	(AGGG)n	Simple_repeat	1	57	(0)	474911
344	32.1	13.3	3.3	chr10	71270398	71270765	(62526657)	C	L2a	LINE/L2	(483)	2936	2536	474909
18	23.2	0.0	3.6	chr10	71404964	71405018	(62392404)	+	G-rich	Low_complexity	1	55	(0)	475205
5246	7.2	0.9	1.7	chr10	71849892	71850663	(61946759)	+	MER4E	LTR/ERV1	1	766	(0)	476010
2152	12.8	0.0	0.0	chr10	71857664	71857967	(61939455)	C	AluSx	SINE/Alu	(8)	304	1	476027
35	6.7	2.1	0.0	chr10	71889322	71889368	(61908054)	+	(CT)n	Simple_repeat	1	48	(0)	476116
28	10.3	5.7	4.0	chr10	72188507	72188576	(61608846)	+	A-rich	Low_complexity	1	74	(0)	476703
1386	10.6	0.5	0.0	chr10	72585083	72585270	(61212152)	C	AluSx1	SINE/Alu	(7)	305	117	477567
12	19.7	0.0	0.0	chr10	72829424	72829452	(60967970)	+	(TTTAC)n	Simple_repeat	1	29	(0)	478112
19	11.7	0.0	0.0	chr10	73095523	73095550	(60701872)	+	(A)n	Simple_repeat	1	28	(0)	478599
2007	10.9	6.6	0.3	chr10	73966643	73966925	(59830497)	+	AluSx1	SINE/Alu	1	302	(10)	480277
1838	23.2	6.9	10.6	chr10	73994665	73995227	(59802195)	C	MLT1E3	LTR/ERVL-MaLR	(54)	570	1	480348
2216	10.0	0.0	0.0	chr10	74149268	74149587	(59647835)	C	AluSg	SINE/Alu	(0)	310	1	480648
12	7.8	7.4	0.0	chr10	74149611	74149637	(59647785)	+	(CTTCA)n	Simple_repeat	1	29	(0)	480649
2027	12.8	0.0	0.3	chr10	74185866	74186147	(59611275)	C	AluSz	SINE/Alu	(30)	282	2	480734
49	6.6	0.0	1.5	chr10	74186181	74186247	(59611175)	+	(CCTTC)n	Simple_repeat	1	67	(0)	480735
23	12.0	4.3	0.0	chr10	74186249	74186300	(59611122)	+	(CCTTTCC)n	Simple_repeat	1	54	(0)	480736
1696	15.3	0.0	8.0	chr10	74186301	74186600	(59610822)	C	AluJb	SINE/Alu	(33)	279	4	480737
3151	17.9	3.5	1.3	chr10	74189592	74190261	(59607161)	C	L1MB7	LINE/L1	(21)	6163	5479	480745
3770	19.9	2.7	2.8	chr10	74190252	74190981	(59606441)	C	L1M4	LINE/L1	(6692)	825	91	480742
1431	20.1	6.3	1.5	chr10	74474125	74474397	(59323025)	C	AluJb	SINE/Alu	(20)	292	6	481244
56	14.0	6.6	0.0	chr10	74474431	74474552	(59322870)	+	(CTTTC)n	Simple_repeat	1	130	(0)	481245
30	22.1	2.5	1.2	chr10	74474489	74474568	(59322854)	+	(CCCTT)n	Simple_repeat	1	82	(0)	481246
1127	22.3	8.1	0.8	chr10	74474571	74474821	(59322601)	C	AluJb	SINE/Alu	(39)	273	3	481247
544	21.7	4.8	0.0	chr10	74503100	74503219	(59294203)	+	MER58B	DNA/hAT-Charlie	216	341	(0)	481307
184	39.5	4.8	5.2	chr10	74503242	74503492	(59293930)	C	L2	LINE/L2	(340)	3079	2830	481308
15283	19.7	7.1	4.1	chr10	74511008	74514812	(59282610)	C	L1MA5A	LINE/L1	(1140)	6422	2347	481318
13	24.9	4.6	2.9	chr10	74576162	74576226	(59221196)	+	GA-rich	Low_complexity	1	68	(0)	481427
2134	14.0	0.0	0.3	chr10	75165695	75166002	(58631420)	+	AluJr	SINE/Alu	2	308	(4)	482569
422	16.7	0.0	0.0	chr10	75166133	75166198	(58631224)	C	MER66C	LTR/ERV1	(119)	436	371	482570
20	24.1	3.6	0.0	chr10	75402683	75402737	(58394685)	+	GA-rich	Low_complexity	1	57	(0)	483056
100	20.7	3.2	1.5	chr10	77177233	77177483	(56619939)	+	(TCTT)n	Simple_repeat	1	259	(0)	485486
26	0.0	2.6	5.1	chr10	77177487	77177524	(56619898)	+	(TTTCT)n	Simple_repeat	1	39	(0)	485487
1488	25.6	8.6	6.9	chr10	77943668	77943882	(55853540)	C	L1ME3B	LINE/L1	(42)	6200	6019	486864
463	25.4	7.6	0.0	chr10	78261593	78261757	(55535665)	+	L2a	LINE/L2	3203	3404	(22)	487483
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
27	35.5	3.3	0.0	chr10	79230123	79230244	(54567178)	+	(TC)n	Simple_repeat	1	126	(0)	489297
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
146	22.0	3.7	1.9	chr10	79581067	79581384	(54216038)	+	A-rich	Low_complexity	91	416	(0)	489876
745	10.6	0.0	0.0	chr10	84188344	84188447	(49608975)	+	AluSx3	SINE/Alu	193	296	(15)	496454
708	27.5	10.2	5.5	chr10	85703106	85703666	(48093756)	+	L1M6	LINE/L1	1652	2241	(4255)	498477
20	18.4	0.0	0.0	chr10	86759401	86759437	(47037985)	+	(T)n	Simple_repeat	1	37	(0)	500087
534	24.3	22.8	3.1	chr10	86865837	86866223	(46931199)	C	LTR50	LTR/ERVL	(275)	520	35	500308
244	29.4	4.7	7.3	chr10	86866359	86866391	(46931031)	+	MIR	SINE/MIR	67	99	(163)	500309
1819	13.0	0.4	1.2	chr10	86866400	86866663	(46930759)	C	AluSx3	SINE/Alu	(0)	311	45	500310
21	48.1	0.0	0.0	chr10	88047742	88047873	(45749549)	+	(TTTTTT)n	Simple_repeat	1	132	(0)	502217
1514	18.6	2.4	0.3	chr10	89032362	89032652	(44764770)	C	L1MB5	LINE/L1	(2)	6172	5876	503750
101	16.9	1.6	7.7	chr10	89142500	89142804	(44654618)	+	GA-rich	Low_complexity	1	310	(0)	503933
2103	16.7	0.3	1.3	chr10	89294693	89295004	(44502418)	+	AluJb	SINE/Alu	1	309	(3)	504166
68	3.6	0.0	0.0	chr10	89295005	89295089	(44502333)	+	(GGAAA)n	Simple_repeat	1	85	(0)	504167
22	23.8	5.3	5.0	chr10	89707516	89707629	(44089793)	+	(TTCCC)n	Simple_repeat	1	120	(0)	504855
1030	10.9	0.0	2.2	chr10	90896917	90897054	(42900368)	C	FLAM_C	SINE/Alu	(8)	135	1	506493
1918	27.2	10.3	2.6	chr10	91473947	91474509	(42322913)	+	L1MEd	LINE/L1	1716	2382	(3764)	507350
4409	13.0	2.8	0.3	chr10	91796574	91797282	(42000140)	C	Tigger1	DNA/TcMar-Tigger	(1493)	925	199	507862
19	31.4	2.2	2.2	chr10	92751994	92752082	(41045340)	+	(TCCC)n	Simple_repeat	1	91	(0)	509821
15	24.3	2.2	0.0	chr10	92752054	92752098	(41045324)	+	(CTTT)n	Simple_repeat	1	46	(0)	509822
1617	16.8	2.4	3.4	chr10	92752122	92752412	(41045010)	+	AluJr	SINE/Alu	22	309	(3)	509823
14	4.2	3.7	3.6	chr10	92876895	92876921	(40920501)	+	(TTCA)n	Simple_repeat	1	28	(0)	510067
470	13.1	0.0	0.0	chr10	95308899	95308959	(38488463)	C	AluYb8	SINE/Alu	(257)	61	1	514071
668	24.8	13.2	2.4	chr10	95908678	95909008	(37888414)	C	MamRep4096	DNA/hAT-Tip100	(41)	385	14	515095
185	26.7	6.2	2.2	chr10	96514271	96514362	(37283060)	+	MIR	SINE/MIR	10	105	(157)	516114
949	13.5	6.0	0.0	chr10	96661632	96661772	(37135650)	+	AluJr	SINE/Alu	129	278	(34)	516371
49	5.3	0.0	0.0	chr10	96661778	96661836	(37135586)	+	(AGGACAGGAC)n	Simple_repeat	1	59	(0)	516372
26	9.3	2.1	2.0	chr10	96661837	96661843	(37135579)	+	(AAGGGA)n	Simple_repeat	1	18	(31)	516373
15	7.6	0.0	6.2	chr10	96661844	96661875	(37135547)	+	(AAAGG)n	Simple_repeat	1	32	(0)	516374
26	9.3	2.1	2.0	chr10	96661876	96661884	(37135538)	+	(AAGGGA)n	Simple_repeat	19	49	(0)	516373
410	25.5	5.7	4.5	chr10	96661923	96662078	(37135344)	+	L1MB8	LINE/L1	4981	5138	(1008)	516368
5348	14.2	2.3	0.3	chr10	97563397	97564296	(36233126)	C	HERVH-int	LTR/ERV1	(1697)	6016	5099	518219
145	27.4	4.1	3.5	chr10	97925283	97925826	(35871596)	+	(AGTGAG)n	Simple_repeat	5	557	(0)	519022
1761	20.3	1.9	0.0	chr10	98110216	98110521	(35686901)	+	AluJo	SINE/Alu	1	312	(0)	519398
55	8.7	4.0	1.0	chr10	98110522	98110608	(35686814)	+	(GAAAG)n	Simple_repeat	3	92	(0)	519399
198	16.7	5.3	0.0	chr10	98110629	98110664	(35686758)	C	L2a	LINE/L2	(21)	3405	3368	519400
1933	9.5	10.6	2.5	chr10	99392710	99392994	(34404428)	+	AluSz	SINE/Alu	2	312	(0)	521388
12	18.8	4.3	4.2	chr10	100267768	100267813	(33529609)	+	GA-rich	Low_complexity	1	48	(0)	523048
39	0.0	0.0	0.0	chr10	100267911	100267946	(33529476)	+	(CTAAC)n	Simple_repeat	1	36	(0)	523049
180	30.4	7.1	1.2	chr10	100348668	100348747	(33448675)	+	L3	LINE/CR1	65	149	(3950)	523192
1238	22.3	6.6	15.1	chr10	100629570	100629877	(33167545)	+	MLT1A1	LTR/ERVL-MaLR	87	375	(33)	523688
17	26.0	6.7	1.1	chr10	100730295	100730383	(33067039)	+	(TTCTCC)n	Simple_repeat	1	95	(0)	523888
11	24.4	3.7	8.8	chr10	100747296	100747404	(33050018)	+	GA-rich	Low_complexity	1	113	(0)	523909
2127	12.2	0.3	2.8	chr10	101041499	101041818	(32755604)	C	AluJb	SINE/Alu	(0)	312	1	524367
1811	17.7	1.9	3.2	chr10	101046176	101046491	(32750931)	+	AluJr4	SINE/Alu	1	312	(0)	524377
25	25.6	0.0	5.2	chr10	101046492	101046555	(32750867)	+	A-rich	Low_complexity	30	90	(0)	524378
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
2204	10.6	0.0	2.8	chr10	101246464	101246784	(32550638)	+	AluJb	SINE/Alu	1	312	(0)	524727
17	18.4	0.0	0.0	chr10	101467330	101467360	(32330062)	+	(T)n	Simple_repeat	1	31	(0)	525154
19	19.2	0.0	0.0	chr10	102114877	102114918	(31682504)	+	(CACTCA)n	Simple_repeat	1	42	(0)	526320
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
1636	11.1	0.0	0.0	chr10	102137057	102137273	(31660149)	+	AluSx1	SINE/Alu	1	217	(95)	526371
500	28.3	11.3	4.2	chr10	102153071	102153313	(31644109)	+	MIRb	SINE/MIR	3	267	(1)	526386
2203	10.8	1.0	1.0	chr10	102492721	102493027	(31304395)	+	AluSz6	SINE/Alu	2	308	(4)	527029
363	33.3	10.6	1.4	chr10	102976339	102976425	(30820997)	+	L2c	LINE/L2	3152	3247	(140)	527983
212	25.7	5.4	11.4	chr10	103067667	103067745	(30729677)	C	L2b	LINE/L2	(25)	3362	3278	528178
1989	15.6	1.0	2.9	chr10	103197743	103198057	(30599365)	+	AluJo	SINE/Alu	1	309	(3)	528401
614	26.7	8.1	5.3	chr10	103198058	103198077	(30599345)	C	L2c	LINE/L2	(308)	3079	3055	528400
12	16.9	0.0	0.0	chr10	103198079	103198105	(30599317)	+	GA-rich	Low_complexity	1	27	(0)	528402
3143	19.0	5.5	7.8	chr10	103253978	103254369	(30543053)	C	L1M4	LINE/L1	(5506)	2011	1733	528522
1922	14.6	1.9	5.3	chr10	103254370	103254692	(30542730)	C	AluJb	SINE/Alu	(0)	312	1	528528
377	27.4	17.3	1.3	chr10	103257787	103257941	(30539481)	+	MIRb	SINE/MIR	4	188	(80)	528537
20	26.4	1.3	3.8	chr10	103258008	103258085	(30539337)	+	(CTTT)n	Simple_repeat	1	79	(0)	528538
2261	13.3	2.5	2.7	chr10	103504292	103504694	(30292728)	C	L1MC3	LINE/L1	(266)	7519	7118	529101
470	19.6	12.8	2.0	chr10	103966531	103966676	(29830746)	C	MIRb	SINE/MIR	(19)	249	86	529995
2663	16.9	16.3	2.0	chr10	104253809	104254461	(29542961)	C	MER4CL34	LTR/ERV1	(0)	765	1	530421
206	16.6	1.9	6.1	chr10	104255480	104255548	(29541874)	C	MIRc	SINE/MIR	(46)	162	94	530423
79	12.2	3.1	3.0	chr10	106706184	106706345	(27091077)	+	GA-rich	Low_complexity	1	167	(0)	534116
1063	25.9	13.3	3.0	chr10	109921653	109922082	(23875340)	+	MLT1K	LTR/ERVL-MaLR	14	494	(101)	538602
19	14.5	0.0	0.0	chr10	110223992	110224022	(23573400)	+	(A)n	Simple_repeat	1	31	(0)	539135
18	20.4	3.3	3.2	chr10	110224023	110224051	(23573371)	+	A-rich	Low_complexity	1	62	(0)	539136
12	15.8	2.6	2.6	chr10	110276811	110276834	(23520588)	+	(TCATTT)n	Simple_repeat	1	24	(0)	539206
2181	13.7	1.6	0.0	chr10	110276835	110277141	(23520281)	C	AluSz6	SINE/Alu	(0)	312	1	539207
24	15.8	0.0	0.0	chr10	110345864	110345905	(23451517)	+	(CT)n	Simple_repeat	1	42	(0)	539303
251	24.7	4.5	5.6	chr10	110345920	110346009	(23451413)	C	LTR51	LTR/ERV1	(14)	657	569	539304
2572	17.1	4.9	0.2	chr10	110380577	110381097	(23416325)	C	L1MB7	LINE/L1	(354)	5830	5284	539373
266	29.3	11.5	0.8	chr10	110558471	110558594	(23238828)	C	MIR1_Amn	SINE/MIR	(74)	156	18	539766
1906	11.1	7.3	0.4	chr10	110558777	110559055	(23238367)	C	AluSg	SINE/Alu	(10)	300	1	539767
21	12.9	2.2	2.2	chr10	110920513	110920557	(22876865)	+	(TCTT)n	Simple_repeat	1	46	(0)	540374
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
27	0.0	0.0	0.0	chr10	112957191	112957216	(20840206)	+	(T)n	Simple_repeat	1	26	(0)	543555
18	9.5	2.9	0.0	chr10	113159791	113159820	(20637602)	+	(TTTTTA)n	Simple_repeat	1	119	(0)	543841
30	22.9	4.7	1.1	chr10	113159821	113159906	(20637516)	+	(TC)n	Simple_repeat	1	90	(0)	543842
192	18.6	4.5	6.5	chr10	113849202	113849247	(19948175)	C	X6B_LINE	LINE/CR1	(146)	926	882	544975
316	10.9	0.0	0.0	chr10	114597404	114597449	(19199973)	+	L1MC2	LINE/L1	6273	6318	(26)	546187
66	18.4	5.5	1.6	chr10	114597452	114597581	(19199841)	+	GA-rich	Low_complexity	1	190	(0)	546188
23	24.0	0.0	0.0	chr10	114597582	114597631	(19199791)	+	A-rich	Low_complexity	1	50	(0)	546189
592	20.4	10.8	0.0	chr10	115143486	115143617	(18653805)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	227	547128
23	19.9	2.9	2.9	chr10	115143680	115143747	(18653675)	+	GA-rich	Low_complexity	1	70	(0)	547129
950	21.4	1.6	0.6	chr10	115143779	115143961	(18653461)	C	MLT1A	LTR/ERVL-MaLR	(186)	188	4	547128
19	22.3	0.0	4.8	chr10	115174239	115174301	(18623121)	+	(TTTTC)n	Simple_repeat	1	63	(0)	547163
248	21.3	7.6	0.0	chr10	115174367	115174427	(18622995)	C	L1MB8	LINE/L1	(5153)	2018	1953	547160
4861	23.2	6.0	1.6	chr10	115354223	115355548	(18441874)	C	L1MA4	LINE/L1	(4463)	3102	1714	547355
243	28.3	20.8	1.5	chr10	116207971	116208171	(17589251)	+	L2a	LINE/L2	2785	3034	(385)	548431
17	19.7	2.0	3.9	chr10	118342436	118342486	(15454936)	+	(TTTC)n	Simple_repeat	1	52	(0)	551885
475	28.6	14.5	7.0	chr10	119166926	119167543	(14629879)	+	L2a	LINE/L2	2745	3424	(2)	553373
1033	15.0	4.8	0.0	chr10	119317892	119318071	(14479351)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	553682
377	16.5	6.6	1.2	chr10	119724815	119724900	(14072522)	+	LTR9D	LTR/ERV1	469	559	(86)	554471
17	0.0	0.0	0.0	chr10	119724901	119724919	(14072503)	+	(A)n	Simple_repeat	1	19	(0)	554472
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
1700	19.5	1.3	3.1	chr10	121072822	121073139	(12724283)	C	AluJo	SINE/Alu	(0)	312	1	556592
21	27.1	2.9	4.7	chr10	121073180	121073283	(12724139)	+	A-rich	Low_complexity	1	107	(0)	556593
12	9.1	4.2	0.0	chr10	121573482	121573505	(12223917)	+	(AGAA)n	Simple_repeat	1	25	(0)	557350
17	16.2	2.7	2.6	chr10	121668744	121668780	(12128642)	+	GA-rich	Low_complexity	1	38	(0)	557520
12	22.3	8.8	0.0	chr10	121928210	121928266	(11869156)	+	G-rich	Low_complexity	1	62	(0)	557960
770	20.7	3.8	6.6	chr10	122060362	122060604	(11736818)	C	MER106A	DNA/hAT-Charlie	(0)	236	1	558248
335	29.5	4.3	15.1	chr10	122060605	122060722	(11736700)	C	L2b	LINE/L2	(737)	2682	2577	558246
211	20.3	7.5	0.0	chr10	122375444	122375517	(11421905)	C	MIRc	SINE/MIR	(159)	109	30	558777
499	30.2	9.3	1.4	chr10	122939127	122939344	(10858078)	C	L2a	LINE/L2	(1)	3425	3189	559514
18	12.1	2.8	0.0	chr10	122939348	122939383	(10858039)	+	(AAGAA)n	Simple_repeat	1	37	(0)	559515
2466	9.8	0.0	0.0	chr10	124962984	124963289	(8834133)	+	AluSx	SINE/Alu	1	306	(6)	562856
2377	7.9	0.0	0.3	chr10	125220832	125221121	(8576301)	+	AluYc	SINE/Alu	10	298	(1)	563168
41	15.6	2.4	1.2	chr10	125221125	125221208	(8576214)	+	A-rich	Low_complexity	1	86	(0)	563169
1380	18.5	15.0	5.3	chr10	125708632	125709270	(8088152)	+	LTR48	LTR/ERV1	1	644	(0)	563903
76	7.3	2.5	1.6	chr10	132097885	132098005	(1699417)	+	(CTTCCC)n	Simple_repeat	1	124	(0)	571333
1860	17.3	3.9	0.0	chr10	132098024	132098323	(1699099)	C	AluJb	SINE/Alu	(0)	312	1	571334
1371	21.0	2.8	3.1	chr10	132348534	132348957	(1448465)	C	MER4CL34	LTR/ERV1	(3)	762	1	571565
38	3.5	6.7	0.0	chr10	132563666	132563725	(1233697)	+	(AAAGG)n	Simple_repeat	1	64	(0)	571780
714	22.4	11.9	1.4	chr10	132886660	132886944	(910478)	+	LTR35	LTR/ERV1	52	425	(183)	572017
498	5.8	14.4	0.2	chr10	132886976	132888069	(909353)	+	(TC)n	Simple_repeat	1	1252	(0)	572018
125	5.3	1.2	1.8	chr11	3814720	3814884	(131271738)	+	(TTTC)n	Simple_repeat	1	167	(0)	577764
32	2.5	0.0	0.0	chr11	3814886	3814926	(131271696)	+	(TTCCCT)n	Simple_repeat	1	41	(0)	577765
1608	15.0	0.0	0.0	chr11	3814927	3815153	(131271469)	C	AluSx3	SINE/Alu	(1)	310	84	577766
80	5.4	0.0	5.4	chr11	5175690	5175819	(129910803)	+	(CCTTT)n	Simple_repeat	1	130	(0)	579700
760	17.1	11.1	3.2	chr11	7711412	7711621	(127375001)	+	AluJo	SINE/Alu	129	312	(0)	582987
48	1.4	7.0	0.0	chr11	7711647	7711717	(127374905)	+	(CCTTTC)n	Simple_repeat	1	76	(0)	582988
2227	12.0	1.3	0.0	chr11	7711720	7712027	(127374595)	C	AluSq2	SINE/Alu	(1)	312	1	582989
452	30.6	10.8	2.8	chr11	8596278	8596600	(126490022)	+	L4_B_Mam	LINE/RTE-X	4561	4912	(29)	584187
235	25.5	0.0	1.8	chr11	9210943	9210998	(125875624)	+	L1MEf	LINE/L1	117	171	(6029)	585196
1678	25.2	9.7	4.5	chr11	9211011	9211651	(125874971)	+	L1MEf	LINE/L1	134	876	(5324)	585196
920	30.8	17.3	3.8	chr11	9825840	9826700	(125259922)	+	L3	LINE/CR1	3002	4002	(97)	586610
117	0.8	0.8	3.1	chr11	10866043	10866170	(124220452)	+	(TTTCC)n	Simple_repeat	1	129	(0)	588279
15	31.9	2.1	7.0	chr11	10931608	10931747	(124154875)	+	G-rich	Low_complexity	1	143	(0)	588402
13	30.3	4.0	1.3	chr11	16607821	16607894	(118478728)	+	(CAGG)n	Simple_repeat	1	77	(0)	597238
19	17.4	0.0	0.0	chr11	17277489	17277522	(117809100)	+	GA-rich	Low_complexity	1	34	(0)	598474
2029	15.9	1.0	0.3	chr11	27250693	27251001	(107835621)	+	AluJb	SINE/Alu	1	311	(1)	613658
26	15.8	2.4	6.0	chr11	27251002	27251063	(107835559)	+	A-rich	Low_complexity	20	78	(0)	613659
299	28.5	10.0	1.4	chr11	27288512	27288657	(107797965)	C	L1MEd	LINE/L1	(6671)	432	273	613715
20	14.5	7.7	2.9	chr11	27288857	27288904	(107797718)	+	(TTAT)n	Simple_repeat	1	51	(0)	613723
2171	13.2	0.7	0.0	chr11	30211885	30212194	(104874428)	+	AluSx1	SINE/Alu	1	312	(0)	618118
15	15.0	0.0	0.0	chr11	31809415	31809444	(103277178)	+	GA-rich	Low_complexity	1	30	(0)	620436
27	3.4	0.0	0.0	chr11	31810558	31810587	(103276035)	+	(GCGCTG)n	Simple_repeat	1	30	(0)	620438
15	13.7	4.8	2.3	chr11	31810589	31810630	(103275992)	+	(GCTCGCC)n	Simple_repeat	1	44	(0)	620439
17	18.6	7.3	0.0	chr11	31810721	31810775	(103275847)	+	G-rich	Low_complexity	1	59	(0)	620440
15	5.5	0.0	0.0	chr11	31813382	31813400	(103273222)	+	(G)n	Simple_repeat	1	19	(0)	620445
1507	20.1	2.5	2.1	chr11	31911003	31911285	(103175337)	+	AluJb	SINE/Alu	1	284	(28)	620621
152	0.0	0.0	0.0	chr11	31911286	31911417	(103175205)	+	(AAAGG)n	Simple_repeat	1	132	(0)	620622
2300	22.7	7.8	5.2	chr11	31911418	31912154	(103174468)	C	L1MC5	LINE/L1	(900)	8404	7643	620619
187	31.5	12.9	6.1	chr11	32658682	32658911	(102427711)	C	L2c	LINE/L2	(672)	2747	2500	622020
2315	7.3	3.3	0.0	chr11	33267123	33267411	(101819211)	C	AluSx1	SINE/Alu	(12)	300	2	623177
20	6.0	8.3	6.2	chr11	33272599	33272658	(101813964)	+	(TCCTT)n	Simple_repeat	1	65	(0)	623189
418	18.3	2.4	0.0	chr11	33272663	33272744	(101813878)	C	Alu	SINE/Alu	(0)	311	228	623190
14562	12.0	3.9	1.3	chr11	36503850	36506203	(98580419)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1	628543
426	24.9	1.2	11.1	chr11	39371257	39371437	(95715185)	+	LTR12F	LTR/ERV1	236	398	(121)	632433
1988	17.1	0.7	0.0	chr11	40857644	40857941	(94228681)	+	AluJb	SINE/Alu	12	311	(1)	634520
68	4.7	7.3	0.0	chr11	40857947	40858056	(94228566)	+	(GAAAGG)n	Simple_repeat	1	118	(0)	634521
570	23.8	2.6	1.3	chr11	40858096	40858244	(94228378)	C	MER3	DNA/hAT-Charlie	(51)	158	8	634522
1269	31.5	6.2	0.4	chr11	43007393	43007871	(92078751)	C	L2a	LINE/L2	(273)	3153	2643	637770
310	29.0	13.2	3.3	chr11	43007902	43008261	(92078361)	+	L1MC4	LINE/L1	815	1215	(5169)	637771
415	27.8	16.3	5.6	chr11	43008466	43008895	(92077727)	+	L1MC4	LINE/L1	1092	1576	(4807)	637771
54	2.8	0.0	4.9	chr11	46079828	46079908	(89006714)	+	(AAAGG)n	Simple_repeat	1	81	(0)	643249
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
322	34.9	2.4	10.8	chr11	46833084	46833269	(88253353)	C	L2b	LINE/L2	(147)	3228	3059	644729
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
119	14.3	4.3	1.9	chr11	59141706	59141960	(75944662)	+	GA-rich	Low_complexity	1	266	(0)	656394
2126	12.2	3.0	0.0	chr11	59521393	59521688	(75564934)	+	AluSx1	SINE/Alu	1	305	(7)	656882
40	6.9	0.0	4.4	chr11	59521690	59521757	(75564865)	+	(GGGAA)n	Simple_repeat	1	68	(0)	656883
565	2.7	0.0	14.9	chr11	59551294	59551380	(75535242)	+	tRNA-Arg-AGA	tRNA	1	74	(2)	656947
632	2.7	0.0	0.0	chr11	59556429	59556501	(75530121)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	656960
212	22.1	7.4	11.7	chr11	60841672	60841799	(74244823)	C	MIR3	SINE/MIR	(69)	139	18	658979
1511	14.7	1.3	11.7	chr11	63785619	63785959	(71300663)	+	AluJo	SINE/Alu	6	310	(2)	664382
8126	16.4	7.7	7.2	chr11	63785960	63786294	(71300328)	+	L1MCa	LINE/L1	2517	2922	(4719)	664373
604	23.4	10.8	3.8	chr11	63985442	63985655	(71100967)	C	L1MD1	LINE/L1	(67)	6175	5948	664797
559	19.4	0.9	0.0	chr11	63985686	63985793	(71100829)	+	FLAM_A	SINE/Alu	8	116	(26)	664799
1746	16.0	2.2	2.6	chr11	64543552	64543864	(70542758)	+	AluJo	SINE/Alu	1	312	(0)	665826
52	12.0	2.3	6.8	chr11	64543865	64543993	(70542629)	+	A-rich	Low_complexity	1	132	(0)	665827
26	33.6	3.5	0.8	chr11	64543869	64543984	(70542638)	+	GA-rich	Low_complexity	1	120	(0)	665828
305	32.2	4.7	0.0	chr11	64543994	64544114	(70542508)	+	L1MD	LINE/L1	3073	3199	(2947)	665829
17	19.3	6.2	2.9	chr11	64544116	64544180	(70542442)	+	A-rich	Low_complexity	1	69	(0)	665830
1954	14.9	5.2	5.0	chr11	65055469	65055770	(70030852)	+	L1MB4	LINE/L1	5798	6103	(77)	666771
24	23.6	2.6	2.5	chr11	65055788	65055864	(70030758)	+	(CTTT)n	Simple_repeat	1	79	(0)	666773
450	30.8	13.7	5.0	chr11	65428988	65429477	(69657145)	C	L1ME4a	LINE/L1	(251)	5873	5367	667515
1560	12.9	15.0	10.3	chr11	65485413	65485854	(69600768)	C	MER4A	LTR/ERV1	(44)	620	1	667641
247	10.8	6.5	0.6	chr11	65516229	65516702	(69569920)	+	GA-rich	Low_complexity	1	505	(0)	667692
12	24.8	2.0	3.9	chr11	66675085	66675135	(68411487)	+	A-rich	Low_complexity	1	52	(0)	670035
525	25.9	2.4	5.8	chr11	66675223	66675394	(68411228)	C	MIRc	SINE/MIR	(32)	236	71	670036
191	26.4	5.2	10.8	chr11	68118931	68119032	(66967590)	+	MIR3	SINE/MIR	23	118	(112)	672793
1041	23.1	11.0	4.1	chr11	68593952	68594216	(66492406)	+	L1MEc	LINE/L1	2349	2637	(3682)	673688
271	15.6	6.2	0.0	chr11	68594217	68594261	(66492361)	+	FAM	SINE/Alu	118	165	(20)	673690
77	5.1	2.0	0.0	chr11	68594266	68594366	(66492256)	+	(GA)n	Simple_repeat	1	103	(0)	673691
882	12.9	0.0	5.0	chr11	68594375	68594513	(66492109)	+	FLAM_C	SINE/Alu	1	132	(11)	673692
3926	23.3	6.9	2.5	chr11	68646096	68647366	(66439256)	C	L1M4a1	LINE/L1	(662)	1917	337	673745
154	17.7	3.8	2.6	chr11	69899915	69900287	(65186335)	+	GA-rich	Low_complexity	1	387	(0)	675923
467	11.6	5.2	0.1	chr11	69917181	69918020	(65168602)	+	(CT)n	Simple_repeat	1	884	(0)	675957
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
17	0.0	0.0	0.0	chr11	74397746	74397764	(60688858)	+	(T)n	Simple_repeat	1	19	(0)	683974
671	29.2	7.3	3.6	chr11	75233384	75233714	(59852908)	+	MLT1J	LTR/ERVL-MaLR	167	510	(2)	685602
413	33.6	11.1	3.2	chr11	76129641	76129923	(58956699)	+	L2c	LINE/L2	2567	2879	(540)	687383
33	7.5	0.0	0.0	chr11	76129924	76129965	(58956657)	+	(CT)n	Simple_repeat	1	42	(0)	687384
496	33.0	12.2	5.2	chr11	76129966	76130431	(58956191)	+	L2c	LINE/L2	2880	3373	(14)	687383
878	7.5	0.9	0.0	chr11	77728394	77728500	(57358122)	+	AluSp	SINE/Alu	1	108	(205)	690481
61	12.2	3.9	5.6	chr11	77728501	77728654	(57357968)	+	GA-rich	Low_complexity	1	160	(0)	690482
932	22.8	3.3	0.4	chr11	77728656	77728893	(57357729)	+	L1MB7	LINE/L1	5878	6122	(62)	690480
470	27.5	10.9	3.0	chr11	78735638	78735819	(56350803)	+	MIRb	SINE/MIR	34	236	(32)	692558
25	23.9	8.1	0.0	chr11	78735833	78735931	(56350691)	+	(CTCCT)n	Simple_repeat	1	107	(0)	692559
1889	13.1	0.0	9.3	chr11	78735932	78736275	(56350347)	C	AluJb	SINE/Alu	(0)	312	1	692560
13	22.3	1.6	7.9	chr11	79441182	79441243	(55645379)	+	(TCC)n	Simple_repeat	1	63	(0)	693947
8110	20.4	7.4	6.9	chr11	82680539	82682499	(52404123)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	664	699274
32	3.2	0.0	0.0	chr11	82682500	82682531	(52404091)	+	(GA)n	Simple_repeat	1	32	(0)	699275
8110	20.4	7.1	7.0	chr11	82682532	82682809	(52403813)	C	HUERS-P3b-int	LTR/ERV1	(6755)	663	409	699274
17	24.4	5.9	4.6	chr11	82994300	82994401	(52092221)	+	GA-rich	Low_complexity	1	108	(0)	699810
119	4.3	2.8	0.0	chr11	84714527	84714670	(50371952)	+	(CTCTTT)n	Simple_repeat	1	148	(0)	702814
16	25.7	3.2	1.6	chr11	84714698	84714759	(50371863)	+	(TTCCC)n	Simple_repeat	1	64	(0)	702815
60	11.7	3.3	2.4	chr11	87189053	87189172	(47897450)	+	(TTCCTT)n	Simple_repeat	1	124	(0)	706768
66	12.0	4.5	6.0	chr11	94515522	94515697	(40570925)	+	(CCTTT)n	Simple_repeat	1	184	(0)	717263
26	0.0	0.0	0.0	chr11	95096228	95096252	(39990370)	+	(T)n	Simple_repeat	1	25	(0)	718123
18	20.3	0.0	0.0	chr11	95248995	95249029	(39837593)	+	GA-rich	Low_complexity	1	35	(0)	718335
411	30.5	3.4	3.4	chr11	100468356	100468501	(34618121)	C	L2b	LINE/L2	(1)	3374	3229	725064
14	11.0	0.0	5.9	chr11	101432467	101432500	(33654122)	+	(ACTTTC)n	Simple_repeat	1	34	(0)	726380
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
12	12.6	3.7	0.0	chr11	102111432	102111458	(32975164)	+	(TTCC)n	Simple_repeat	1	28	(0)	727407
2170	26.8	6.1	6.6	chr11	102275453	102275863	(32810759)	C	ERV3-16A3_I-int	LTR/ERVL	(4093)	1133	705	727673
287	28.1	6.4	1.0	chr11	107924488	107924591	(27162031)	+	MLT1O	LTR/ERVL-MaLR	255	364	(178)	735853
2196	11.8	0.7	0.0	chr11	107924618	107924914	(27161708)	C	AluSx	SINE/Alu	(12)	300	2	735854
12	29.8	1.4	5.3	chr11	108872813	108872886	(26213736)	+	(TTCCCT)n	Simple_repeat	1	75	(0)	737520
13452	12.9	4.3	4.0	chr11	110100407	110101547	(24985075)	+	Tigger1	DNA/TcMar-Tigger	1	1173	(1245)	739275
14	17.7	0.0	0.0	chr11	112082832	112082863	(23003759)	+	A-rich	Low_complexity	1	32	(0)	742494
83	9.4	3.5	7.1	chr11	113305126	113305325	(21781297)	+	(TTCC)n	Simple_repeat	1	192	(0)	744344
4559	18.2	1.5	1.7	chr11	113925849	113926448	(21160174)	C	L1MB7	LINE/L1	(0)	6184	5583	745409
95	1.1	0.0	0.0	chr11	113926449	113926536	(21160086)	+	(TTTCC)n	Simple_repeat	1	88	(0)	745410
2133	11.6	0.3	0.3	chr11	113926537	113926828	(21159794)	C	AluSx	SINE/Alu	(20)	292	1	745411
16	9.1	0.0	3.9	chr11	114162872	114162897	(20923725)	+	(TC)n	Simple_repeat	1	26	(0)	745822
2235	11.0	0.7	0.3	chr11	118594851	118595150	(16491472)	C	AluSz	SINE/Alu	(11)	301	1	753220
457	23.4	8.1	1.4	chr11	118595371	118595532	(16491090)	C	L1ME1	LINE/L1	(247)	6197	6027	753221
859	20.1	1.7	1.1	chr11	119091109	119091284	(15995338)	+	MIR	SINE/MIR	84	260	(2)	754241
262	27.8	9.1	0.0	chr11	119091283	119091372	(15995250)	C	L2b	LINE/L2	(243)	3132	3034	754239
426	29.8	3.2	7.3	chr11	119151578	119151809	(15934813)	C	MIRc	SINE/MIR	(12)	256	35	754339
26	21.8	5.6	0.0	chr11	123358226	123358296	(11728326)	+	GA-rich	Low_complexity	1	75	(0)	761388
80	12.9	1.1	6.7	chr11	123477582	123477769	(11608853)	+	(CCTTC)n	Simple_repeat	1	177	(0)	761642
528	11.9	0.6	7.2	chr11	133706761	133707911	(1378711)	+	G-rich	Low_complexity	1	1158	(0)	776277
45	20.1	3.5	4.7	chr12	295235	295379	(132979930)	+	A-rich	Low_complexity	1	150	(0)	778514
330	11.8	0.0	23.2	chr12	331282	331380	(132943929)	+	MADE1	DNA/TcMar-Mariner	3	78	(2)	778566
27	17.1	9.6	1.0	chr12	331488	331581	(132943728)	+	A-rich	Low_complexity	1	103	(0)	778567
226	32.8	0.0	7.8	chr12	402415	402543	(132872766)	C	L2c	LINE/L2	(246)	3141	3023	778682
640	20.9	0.9	0.0	chr12	544666	544780	(132730529)	+	MER91A	DNA/hAT-Tip100	1	116	(80)	778942
603	30.4	9.7	10.8	chr12	718932	719186	(132556123)	+	L2c	LINE/L2	1658	1951	(1468)	779325
1828	16.7	10.5	18.2	chr12	719187	719734	(132555575)	C	LTR36	LTR/ERV1	(1)	610	121	779328
25	19.6	1.5	1.5	chr12	779351	779362	(132495947)	+	(CTTTT)n	Simple_repeat	1	43	(0)	779458
12	0.0	0.0	12.9	chr12	779363	779393	(132495916)	+	(TTTC)n	Simple_repeat	1	31	(0)	779459
2356	10.6	1.0	0.0	chr12	779398	779700	(132495609)	C	AluSz	SINE/Alu	(5)	307	2	779460
336	29.0	8.8	1.4	chr12	806084	806230	(132469079)	C	MIRc	SINE/MIR	(1)	267	109	779513
235	39.1	10.0	2.3	chr12	1091325	1091544	(132183765)	C	L2b	LINE/L2	(220)	3155	2917	780090
435	29.1	8.4	2.5	chr12	1091670	1091870	(132183439)	C	L2b	LINE/L2	(540)	2879	2666	780090
19	3.8	0.0	0.0	chr12	1107204	1107230	(132168079)	+	(TTTG)n	Simple_repeat	1	27	(0)	780123
288	31.9	19.4	3.4	chr12	1107274	1107747	(132167562)	C	L2a	LINE/L2	(2190)	1229	662	780116
273	36.0	6.1	6.1	chr12	1129987	1130199	(132145110)	+	L3	LINE/CR1	2328	2540	(1559)	780162
590	14.3	0.0	0.0	chr12	1130217	1130293	(132145016)	+	AluJb	SINE/Alu	1	77	(235)	780163
16	12.4	2.7	2.6	chr12	1200273	1200309	(132075000)	+	(TTCTT)n	Simple_repeat	1	38	(0)	780283
2803	15.5	4.6	4.3	chr12	1226270	1226681	(132048628)	C	L1MA9	LINE/L1	(0)	7014	6525	780335
2152	13.9	0.7	0.0	chr12	1226682	1226976	(132048333)	C	AluSz	SINE/Alu	(15)	297	1	780336
224	23.2	1.6	0.9	chr12	1604758	1605303	(131670006)	+	(GT)n	Simple_repeat	1	555	(0)	780942
16	18.9	2.1	4.1	chr12	3605186	3605233	(129670076)	+	G-rich	Low_complexity	1	49	(0)	784103
15	32.4	1.5	1.5	chr12	3605234	3605251	(129670058)	+	A-rich	Low_complexity	1	67	(0)	784104
1333	23.8	9.5	11.0	chr12	4418259	4419019	(128856290)	C	MER20B	DNA/hAT-Charlie	(0)	783	36	785506
42	7.2	2.5	4.8	chr12	4419073	4419153	(128856156)	+	(TTCCT)n	Simple_repeat	1	83	(0)	785507
311	32.0	10.3	3.7	chr12	4648773	4648934	(128626375)	+	MIR3	SINE/MIR	21	194	(14)	785849
281	32.4	10.3	0.7	chr12	4649570	4649718	(128625591)	+	MIRc	SINE/MIR	88	252	(16)	785850
17	20.9	0.0	2.2	chr12	6323565	6323610	(126951699)	+	(CAGGAA)n	Simple_repeat	1	46	(0)	788477
594	27.1	4.5	0.6	chr12	6355998	6356168	(126919141)	C	MIRb	SINE/MIR	(6)	262	85	788539
15	34.8	1.4	0.0	chr12	6699850	6699919	(126575390)	+	G-rich	Low_complexity	1	71	(0)	789192
15	9.9	8.5	3.9	chr12	6722861	6722907	(126552402)	+	(TTTCC)n	Simple_repeat	1	51	(0)	789264
17	18.9	2.4	0.0	chr12	6722997	6723038	(126552271)	+	(CTCTTT)n	Simple_repeat	1	43	(0)	789265
275	28.5	10.8	1.3	chr12	6723048	6723172	(126552137)	+	MIRb	SINE/MIR	102	229	(1)	789266
23	14.5	0.0	0.0	chr12	6778615	6778652	(126496657)	+	(TC)n	Simple_repeat	1	38	(0)	789364
1655	19.1	0.3	6.4	chr12	6948135	6948464	(126326845)	+	AluJb	SINE/Alu	3	312	(0)	789683
54	22.9	3.4	4.3	chr12	6948465	6948649	(126326660)	+	A-rich	Low_complexity	1	183	(0)	789684
2284	9.2	0.3	2.2	chr12	6948659	6948972	(126326337)	+	AluSx3	SINE/Alu	1	308	(3)	789685
679	17.2	8.0	1.6	chr12	7638632	7638788	(125636521)	+	HUERS-P3-int	LTR/ERV1	412	559	(6859)	790594
5775	21.6	5.1	4.9	chr12	7638797	7639003	(125636306)	+	HUERS-P3-int	LTR/ERV1	750	946	(6472)	790594
159	9.9	3.4	3.0	chr12	7826813	7827107	(125448202)	+	(TCTT)n	Simple_repeat	1	305	(0)	791137
199	4.1	0.0	6.6	chr12	8050814	8051133	(125224176)	+	(TCCCT)n	Simple_repeat	1	320	(0)	791691
2082	12.9	0.3	0.0	chr12	8051135	8051428	(125223881)	C	AluSz6	SINE/Alu	(16)	296	2	791692
20	4.3	0.0	0.0	chr12	8687818	8687841	(124587468)	+	(A)n	Simple_repeat	1	24	(0)	792724
15	20.3	2.1	2.1	chr12	8914162	8914208	(124361101)	+	(TCTCCCG)n	Simple_repeat	1	48	(0)	793138
468	33.0	6.1	1.1	chr12	10782604	10782790	(122492519)	C	MER110	LTR/ERV1	(93)	398	202	795656
2242	12.6	0.0	0.0	chr12	12808959	12809259	(120466050)	C	AluSx	SINE/Alu	(11)	301	1	798820
626	30.3	6.8	0.1	chr12	13043888	13044132	(120231177)	C	MIRb	SINE/MIR	(2)	266	1	799299
300	22.6	5.1	4.1	chr12	13044135	13044231	(120231078)	C	MIRb	SINE/MIR	(69)	199	102	799300
777	21.4	1.7	1.1	chr12	13098876	13099050	(120176259)	+	Arthur1A	DNA/hAT-Tip100	1	176	(1)	799369
45	18.3	5.8	2.7	chr12	13380457	13380596	(119894713)	+	(TTCCT)n	Simple_repeat	1	144	(0)	799776
275	34.6	7.9	3.4	chr12	13380601	13381046	(119894263)	+	L2a	LINE/L2	2659	3123	(264)	799777
79	24.7	3.2	0.5	chr12	14845511	14845727	(118429582)	+	GA-rich	Low_complexity	1	224	(0)	802005
658	22.6	1.7	8.4	chr12	15516287	15516366	(117758943)	+	AluJr	SINE/Alu	240	312	(0)	802918
85	29.5	1.1	1.8	chr12	15516367	15516637	(117758672)	+	A-rich	Low_complexity	1	274	(0)	802920
17	0.0	0.0	0.0	chr12	15628087	15628138	(117647171)	+	(GGGA)n	Simple_repeat	1	52	(0)	803062
197	29.8	0.0	0.0	chr12	15726769	15726815	(117548494)	C	L2a	LINE/L2	(12)	3414	3368	803200
596	27.5	2.4	0.5	chr12	19506442	19506642	(113768667)	C	L1ME1	LINE/L1	(15)	6164	5960	808333
1319	29.4	7.8	1.6	chr12	19506655	19507211	(113768098)	C	L2a	LINE/L2	(608)	2811	2218	808330
935	13.9	1.9	1.3	chr12	19525239	19525396	(113749913)	C	AluYc	SINE/Alu	(0)	299	141	808367
34	5.9	1.7	3.4	chr12	19525426	19525483	(113749826)	+	(CCTTTC)n	Simple_repeat	1	59	(0)	808368
1877	17.0	2.3	1.0	chr12	19525486	19525791	(113749518)	C	AluSx	SINE/Alu	(2)	310	1	808369
17	26.9	3.9	2.5	chr12	20368450	20368526	(112906783)	+	(TCCT)n	Simple_repeat	1	80	(0)	809554
207	15.4	4.6	4.4	chr12	23034436	23034980	(110240329)	+	(TTTC)n	Simple_repeat	1	570	(0)	813071
306	27.3	5.1	2.6	chr12	25155030	25155183	(108120126)	C	L1ME4c	LINE/L1	(392)	438	281	816056
1383	23.6	19.2	0.4	chr12	26009516	26010052	(107265257)	C	L2c	LINE/L2	(1099)	2320	1659	817376
28	4.6	2.0	4.0	chr12	26516160	26516208	(106759101)	+	(AGGGG)n	Simple_repeat	1	50	(0)	818084
161	2.0	0.0	0.0	chr12	26516214	26516366	(106758943)	+	(AAGGA)n	Simple_repeat	1	153	(0)	818085
393	8.1	2.9	5.3	chr12	26565825	26566580	(106708729)	+	GA-rich	Low_complexity	1	778	(0)	818154
98	14.6	0.6	1.7	chr12	26884179	26884356	(106390953)	+	A-rich	Low_complexity	1	179	(0)	818648
1483	24.9	4.2	3.0	chr12	26884381	26884397	(106390912)	C	LTR41B	LTR/ERVL	(120)	638	624	818645
2611	5.2	0.0	0.0	chr12	26884398	26884702	(106390607)	+	AluY	SINE/Alu	1	305	(6)	818649
1298	19.6	8.4	5.7	chr12	26929440	26929704	(106345605)	+	AluJr4	SINE/Alu	2	274	(38)	818715
65	16.5	3.5	1.3	chr12	26929705	26929848	(106345461)	+	GA-rich	Low_complexity	1	149	(0)	818716
2957	14.9	6.2	0.2	chr12	26929859	26930449	(106344860)	+	L1M4	LINE/L1	4171	4799	(1347)	818714
21	0.0	0.0	0.0	chr12	27525514	27525536	(105749773)	+	(A)n	Simple_repeat	1	23	(0)	819697
187	28.3	0.0	0.0	chr12	27549960	27550005	(105725304)	+	MIR	SINE/MIR	12	57	(205)	819736
1523	20.9	0.7	2.0	chr12	29781550	29781851	(103493458)	+	AluJo	SINE/Alu	6	303	(9)	822851
367	25.9	14.3	2.4	chr12	31370116	31370281	(101905028)	+	MIR3	SINE/MIR	17	205	(3)	825129
1762	13.2	2.0	0.4	chr12	31491213	31491455	(101783854)	+	AluSz6	SINE/Alu	43	289	(23)	825381
29	10.1	7.6	1.4	chr12	31491512	31491577	(101783732)	+	A-rich	Low_complexity	1	71	(0)	825382
316	23.4	4.3	5.1	chr12	31491581	31491697	(101783612)	+	L1ME3Cz	LINE/L1	873	988	(9)	825383
154	15.1	2.6	3.9	chr12	32029336	32029682	(101245627)	+	A-rich	Low_complexity	1	356	(0)	826627
295	35.6	0.0	0.0	chr12	32657672	32657775	(100617534)	C	MamTip3	DNA/hAT-Tip100	(214)	286	183	827865
201	7.8	2.7	2.9	chr12	38902141	38902476	(94372833)	+	(GAAA)n	Simple_repeat	1	345	(0)	831694
23	0.0	0.0	0.0	chr12	39420075	39420099	(93855210)	+	(A)n	Simple_repeat	1	25	(0)	832408
300	37.2	3.4	6.6	chr12	39420101	39420405	(93854904)	+	LTR78B	LTR/ERV1	484	778	(518)	832407
295	27.0	6.9	5.2	chr12	39581100	39581271	(93694038)	+	L1ME4b	LINE/L1	717	891	(1)	832658
235	27.1	5.3	4.3	chr12	39581285	39581427	(93693882)	C	L1ME4b	LINE/L1	(89)	803	727	832659
846	20.0	6.5	3.9	chr12	40011163	40011370	(93263939)	C	MER20	DNA/hAT-Charlie	(0)	219	6	833172
1398	13.7	0.0	8.6	chr12	40011474	40011728	(93263581)	C	L1PA16	LINE/L1	(4)	6162	5930	833173
2067	13.3	3.9	0.7	chr12	40038459	40038759	(93236550)	+	AluJb	SINE/Alu	1	311	(1)	833205
4249	25.3	8.4	5.8	chr12	40038760	40038976	(93236333)	C	L1MEf	LINE/L1	(3445)	2874	2689	833203
10805	25.3	8.6	2.5	chr12	42844033	42845737	(90429572)	C	L1MA9	LINE/L1	(3537)	3305	1558	837275
2169	13.1	0.7	0.0	chr12	42845738	42846035	(90429274)	C	AluSz6	SINE/Alu	(12)	300	1	837277
2429	7.6	0.7	0.3	chr12	43759589	43759890	(89515419)	+	AluSx1	SINE/Alu	3	305	(7)	838505
86	8.4	9.2	0.0	chr12	46125342	46125505	(87149804)	+	GA-rich	Low_complexity	1	179	(0)	841856
406	28.9	1.3	7.3	chr12	46159487	46159650	(87115659)	C	Charlie18a	DNA/hAT-Charlie	(188)	154	1	841914
452	26.3	13.6	4.8	chr12	46263278	46263545	(87011764)	C	MER102b	DNA/hAT-Charlie	(32)	298	4	842043
12	21.7	0.0	0.0	chr12	46263654	46263685	(87011624)	+	(TTTCTT)n	Simple_repeat	1	32	(0)	842044
23	26.2	1.5	0.0	chr12	47739471	47739538	(85535771)	+	(TCTC)n	Simple_repeat	1	69	(0)	844122
1331	29.6	5.0	1.2	chr12	48794825	48795437	(84479872)	C	L2a	LINE/L2	(162)	3264	2625	845799
2367	10.3	0.3	0.0	chr12	49320564	49320873	(83954436)	+	AluSx1	SINE/Alu	1	311	(1)	846964
59	17.7	4.4	0.8	chr12	49320874	49320989	(83954320)	+	GA-rich	Low_complexity	1	120	(0)	846965
2187	10.8	0.0	0.7	chr12	49320990	49321276	(83954033)	C	AluSq2	SINE/Alu	(15)	298	14	846966
12529	15.5	2.9	1.8	chr12	49608518	49610508	(83664801)	+	L1ME1	LINE/L1	1	2016	(4837)	847494
191	33.1	14.5	3.0	chr12	49698758	49698891	(83576418)	C	MIR1_Amn	SINE/MIR	(78)	152	1	847630
3113	24.8	4.4	8.4	chr12	49851512	49852409	(83422900)	+	HAL1	LINE/L1	1032	1933	(574)	847932
100	16.8	3.6	1.7	chr12	50135086	50135308	(83140001)	+	GA-rich	Low_complexity	1	231	(0)	848486
839	30.5	8.1	9.2	chr12	51404345	51404781	(81870528)	+	MLT1K	LTR/ERVL-MaLR	73	504	(91)	851298
18	27.6	4.4	0.0	chr12	51404793	51404860	(81870449)	+	(TTTCT)n	Simple_repeat	1	71	(0)	851299
233	22.1	2.9	1.4	chr12	51404866	51404934	(81870375)	+	MLT1K	LTR/ERVL-MaLR	524	593	(2)	851298
2303	8.4	0.3	1.4	chr12	53038533	53038829	(80236480)	+	AluSx3	SINE/Alu	1	294	(17)	853980
53	9.4	5.4	3.4	chr12	53222214	53222325	(80052984)	+	A-rich	Low_complexity	1	118	(0)	854284
11	18.4	11.3	2.5	chr12	53493443	53493513	(79781796)	+	A-rich	Low_complexity	1	79	(0)	854862
992	11.7	0.0	2.9	chr12	53559000	53559136	(79716173)	+	FLAM_C	SINE/Alu	1	133	(10)	854979
12	4.3	8.3	0.0	chr12	53953324	53953347	(79321962)	+	(AGAGG)n	Simple_repeat	1	26	(0)	855708
12	28.2	2.1	0.0	chr12	53986683	53986729	(79288580)	+	(TGTTTTC)n	Simple_repeat	1	48	(0)	855735
26	18.7	1.6	1.6	chr12	54017343	54017405	(79257904)	+	GA-rich	Low_complexity	1	64	(0)	855760
18	17.5	0.0	0.0	chr12	54027559	54027591	(79247718)	+	(CT)n	Simple_repeat	1	33	(0)	855764
14	19.8	0.0	2.7	chr12	54029972	54030008	(79245301)	+	(TCCC)n	Simple_repeat	1	37	(0)	855767
202	33.3	0.0	0.0	chr12	54216435	54216515	(79058794)	C	L3b	LINE/CR1	(199)	5033	4953	856064
43	0.0	0.0	0.0	chr12	54386174	54386210	(78889099)	+	(AC)n	Simple_repeat	1	37	(0)	856358
16	20.0	3.6	3.5	chr12	54426099	54426153	(78849156)	+	GA-rich	Low_complexity	1	57	(0)	856418
201	27.7	3.8	7.3	chr12	55814225	55814333	(77460976)	+	L2	LINE/L2	2807	2911	(508)	858299
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
2333	8.1	0.0	0.3	chr12	57065973	57066281	(76209028)	+	AluYm1	SINE/Alu	1	308	(3)	860626
4163	15.7	6.1	2.0	chr12	57066282	57066685	(76208624)	C	Tigger1	DNA/TcMar-Tigger	(1703)	715	282	860624
666	22.7	8.7	2.3	chr12	57360436	57360607	(75914702)	+	AluJr	SINE/Alu	85	268	(44)	861114
38	6.7	2.0	10.0	chr12	57360613	57360716	(75914593)	+	GA-rich	Low_complexity	1	95	(0)	861115
341	10.4	0.0	0.0	chr12	57360725	57360772	(75914537)	+	Tigger2	DNA/TcMar-Tigger	873	920	(1798)	861116
2281	8.4	2.0	0.0	chr12	57360775	57361071	(75914238)	+	AluY	SINE/Alu	2	304	(7)	861117
2346	9.4	0.3	0.0	chr12	57747745	57748041	(75527268)	C	AluSx	SINE/Alu	(14)	298	1	861777
3314	18.6	1.5	7.2	chr12	62428100	62429087	(70846222)	C	L1MB1	LINE/L1	(0)	6334	5425	867903
24	16.4	0.0	0.0	chr12	62957158	62957198	(70318111)	+	(T)n	Simple_repeat	1	41	(0)	868750
228	10.5	2.4	3.1	chr12	63763654	63764067	(69511242)	+	A-rich	Low_complexity	1	424	(0)	869887
226	21.8	0.0	3.5	chr12	63985979	63986035	(69289274)	+	L1MEd	LINE/L1	572	626	(6460)	870300
69	14.3	8.2	0.0	chr12	63986046	63986203	(69289106)	+	(CT)n	Simple_repeat	1	171	(0)	870301
2468	11.2	0.0	0.6	chr12	64217518	64217830	(69057479)	+	AluSx1	SINE/Alu	2	312	(0)	870679
53	6.5	10.1	2.3	chr12	64217831	64217954	(69057355)	+	GA-rich	Low_complexity	1	133	(0)	870680
645	9.9	0.0	0.0	chr12	64217957	64218037	(69057272)	C	MER30	DNA/hAT-Charlie	(149)	81	1	870681
39	24.1	1.7	3.3	chr12	64550261	64550380	(68724929)	+	GA-rich	Low_complexity	1	122	(0)	871326
2055	12.4	3.3	0.0	chr12	64550384	64550673	(68724636)	+	AluSx	SINE/Alu	2	301	(11)	871327
12	16.1	0.0	7.5	chr12	64612169	64612208	(68663101)	+	(TTGCTT)n	Simple_repeat	1	40	(0)	871474
267	29.8	6.6	1.7	chr12	64665929	64666044	(68609265)	C	MIRb	SINE/MIR	(37)	231	110	871588
47	19.3	0.0	4.3	chr12	65083732	65083846	(68191463)	+	(TTTTC)n	Simple_repeat	1	115	(0)	872239
886	19.2	4.9	0.0	chr12	65083847	65084002	(68191307)	C	FRAM	SINE/Alu	(12)	164	1	872240
12	31.0	0.0	0.0	chr12	65326079	65326123	(67949186)	+	(TTTTTC)n	Simple_repeat	1	45	(0)	872644
904	29.4	6.4	5.3	chr12	65592874	65593307	(67682002)	C	L3	LINE/CR1	(2)	4097	3659	873016
26	0.0	0.0	0.0	chr12	65791761	65791785	(67483524)	+	(T)n	Simple_repeat	1	25	(0)	873348
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
2491	6.7	0.0	0.7	chr12	66170196	66170494	(67104815)	C	AluSc8	SINE/Alu	(14)	297	1	873920
13	19.4	0.0	2.7	chr12	67274376	67274412	(66000897)	+	A-rich	Low_complexity	1	37	(0)	875658
377	26.6	5.0	0.2	chr12	67888611	67888733	(65386576)	+	MIR	SINE/MIR	3	126	(136)	876556
2046	12.9	6.6	1.7	chr12	68202405	68202766	(65072543)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	877010
535	31.1	5.7	14.6	chr12	68202767	68203001	(65072308)	C	L2c	LINE/L2	(254)	3133	2934	877009
23623	11.9	0.9	2.8	chr12	68244918	68247161	(65028148)	C	MER83A-int	LTR/ERV1	(2122)	2163	12	877065
34	24.3	6.8	2.9	chr12	68853712	68853872	(64421437)	+	GA-rich	Low_complexity	1	172	(0)	878233
301	30.8	5.1	6.5	chr12	70367573	70367711	(62907598)	+	Charlie4z	DNA/hAT-Charlie	2	138	(29)	880784
77	5.0	1.9	1.8	chr12	76181000	76181106	(57094203)	+	(CCTT)n	Simple_repeat	1	109	(0)	888795
1740	18.5	3.6	0.3	chr12	76181212	76181509	(57093800)	C	AluJo	SINE/Alu	(2)	310	3	888796
577	35.3	8.2	6.4	chr12	76548093	76548592	(56726717)	+	HAL1ME	LINE/L1	3	512	(1953)	889424
341	32.0	6.1	1.8	chr12	76551826	76552051	(56723258)	C	MLT1J1	LTR/ERVL-MaLR	(5)	439	203	889429
2121	13.8	0.0	1.0	chr12	76552146	76552456	(56722853)	+	AluSz	SINE/Alu	4	311	(1)	889430
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
871	15.7	2.6	0.0	chr12	79646018	79646164	(53629145)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	86	893803
330	31.2	8.2	4.7	chr12	79646283	79646494	(53628815)	+	HAL1	LINE/L1	387	606	(1901)	893804
1335	32.9	3.1	4.3	chr12	80014149	80014827	(53260482)	C	L1M2	LINE/L1	(6123)	730	60	894425
95	0.0	1.0	2.1	chr12	80014828	80014923	(53260386)	+	(TCCTT)n	Simple_repeat	1	97	(0)	894430
65	3.0	0.0	0.0	chr12	80014938	80015004	(53260305)	+	(TCTT)n	Simple_repeat	1	67	(0)	894431
353	28.1	2.2	1.1	chr12	80226669	80226758	(53048551)	C	HAL1	LINE/L1	(1647)	860	770	894721
11	18.9	0.0	7.1	chr12	80226887	80226928	(53048381)	+	(ATTTAA)n	Simple_repeat	1	42	(0)	894722
1062	28.4	6.3	4.3	chr12	80226929	80227674	(53047635)	C	HAL1	LINE/L1	(1012)	1495	636	894719
29	31.5	1.1	1.0	chr12	80256207	80256301	(53019008)	+	(CT)n	Simple_repeat	1	96	(0)	894761
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
196	17.2	1.6	4.9	chr12	88243011	88243486	(45031823)	+	(TTTC)n	Simple_repeat	1	461	(0)	905236
33	2.9	0.0	0.0	chr12	88307487	88307521	(44967788)	+	(AGAGAA)n	Simple_repeat	1	35	(0)	905329
1428	30.1	8.9	6.9	chr12	89039123	89039572	(44235737)	+	MLT2F	LTR/ERVL	1	428	(235)	906369
505	36.5	5.9	4.3	chr12	89307782	89308150	(43967159)	C	L2a	LINE/L2	(116)	3310	2936	906804
13	27.8	0.0	2.3	chr12	92956412	92956455	(40318854)	+	G-rich	Low_complexity	1	44	(0)	912423
73	29.5	2.9	0.0	chr12	93368820	93369063	(39906246)	+	(CTCT)n	Simple_repeat	1	251	(0)	913302
359	27.9	14.0	2.3	chr12	93468018	93468193	(39807116)	+	MIRc	SINE/MIR	41	240	(28)	913513
742	23.5	10.6	8.2	chr12	94405178	94405553	(38869756)	+	L1MC5	LINE/L1	8913	9298	(6)	915144
3869	22.8	8.2	8.5	chr12	94405566	94406249	(38869060)	+	L1MEc	LINE/L1	35	777	(5623)	915145
318	30.1	8.5	4.7	chr12	95185434	95185580	(38089729)	+	MIRb	SINE/MIR	3	158	(110)	916711
2215	13.9	0.0	1.6	chr12	95534678	95534980	(37740329)	C	AluSz6	SINE/Alu	(14)	298	1	917414
266	29.5	0.0	9.3	chr12	96354104	96354200	(36921109)	C	MIR3	SINE/MIR	(30)	178	91	918894
275	32.5	6.6	0.0	chr12	96354169	96354282	(36921027)	C	MIRc	SINE/MIR	(143)	125	4	918895
115	31.3	2.4	4.2	chr12	96502956	96503491	(36771818)	+	(TTCT)n	Simple_repeat	1	549	(0)	919214
821	34.5	7.2	6.6	chr12	96590628	96591462	(36683847)	C	L2	LINE/L2	(767)	2652	1813	919400
906	10.3	0.1	0.8	chr12	97988289	97989708	(35285601)	+	(GGAAGGGAAG)n	Simple_repeat	1	1422	(0)	921486
1480	34.0	11.7	4.2	chr12	98512862	98513927	(34761382)	C	L2	LINE/L2	(1736)	1683	528	922400
15	4.7	0.0	0.0	chr12	98684253	98684274	(34591035)	+	(TTTA)n	Simple_repeat	1	22	(0)	922768
27	34.4	0.7	4.7	chr12	98684351	98684517	(34590792)	+	(CCTCCC)n	Simple_repeat	1	160	(0)	922769
455	28.4	1.1	5.9	chr12	101276448	101276634	(31998675)	+	L2c	LINE/L2	3043	3220	(167)	926944
19	13.2	2.2	4.3	chr12	101276638	101276683	(31998626)	+	(TCCTT)n	Simple_repeat	1	47	(0)	926945
1985	17.1	1.0	0.3	chr12	101276686	101276977	(31998332)	C	AluJb	SINE/Alu	(17)	295	2	926946
3744	21.1	6.0	9.3	chr12	101654258	101655465	(31619844)	+	L1MCa	LINE/L1	36	1200	(5202)	927719
785	18.0	5.7	0.0	chr12	101655470	101655619	(31619690)	+	L1MCa	LINE/L1	1	159	(6349)	927720
10320	15.2	4.5	1.7	chr12	101655615	101657909	(31617400)	+	L1MCa	LINE/L1	1550	3927	(2394)	927719
43	28.1	5.7	3.9	chr12	104453183	104453446	(28821863)	+	(TCCTC)n	Simple_repeat	1	279	(0)	932610
238	25.0	6.5	1.4	chr12	104953400	104953472	(28321837)	+	LTR79	LTR/ERVL	61	137	(390)	933568
4256	15.6	7.2	1.4	chr12	104956707	104957546	(28317763)	+	L1MB7	LINE/L1	5293	6184	(0)	933574
1767	17.8	3.2	0.3	chr12	105316757	105317059	(27958250)	+	AluJb	SINE/Alu	1	312	(0)	934148
64	24.3	3.0	2.5	chr12	105317060	105317257	(27958052)	+	GA-rich	Low_complexity	1	204	(0)	934149
4379	23.0	4.2	2.8	chr12	106698517	106700026	(26575283)	C	L1MEf	LINE/L1	(2373)	4568	2795	936686
1282	16.8	7.8	0.8	chr12	107097988	107098225	(26177084)	+	AluJb	SINE/Alu	54	309	(3)	937402
88	22.2	4.4	2.8	chr12	107098226	107098500	(26176809)	+	A-rich	Low_complexity	1	287	(0)	937403
18	7.7	0.0	0.0	chr12	107349439	107349466	(25925843)	+	(ATTC)n	Simple_repeat	1	28	(0)	937931
9551	16.9	5.0	6.8	chr12	108737999	108738483	(24536826)	C	L1MD1	LINE/L1	(1761)	4776	4381	940875
2418	10.7	0.0	0.0	chr12	110099817	110100125	(23175184)	+	AluSg	SINE/Alu	2	310	(0)	944025
351	30.8	6.3	0.0	chr12	110100203	110100306	(23175003)	+	MIR3	SINE/MIR	19	129	(79)	944026
61	29.6	2.9	2.8	chr12	111185888	111186165	(22089144)	+	(TCTC)n	Simple_repeat	1	286	(0)	946465
13	8.3	3.9	0.0	chr12	111186179	111186204	(22089105)	+	(CCTTC)n	Simple_repeat	1	27	(0)	946466
2243	20.5	9.1	3.6	chr12	112045983	112046514	(21228795)	+	MER68B	LTR/ERVL	1	564	(0)	948354
1997	16.3	0.0	4.3	chr12	112055414	112055738	(21219571)	+	AluJr	SINE/Alu	2	312	(0)	948365
1451	17.6	3.4	18.2	chr12	112055918	112056052	(21219257)	+	AluJb	SINE/Alu	1	133	(169)	948366
1500	12.6	0.6	17.6	chr12	113193614	113193787	(20081522)	C	AluJb	SINE/Alu	(194)	118	2	951021
2137	14.1	0.0	0.0	chr12	113193956	113194254	(20081055)	+	AluSz6	SINE/Alu	1	299	(13)	951023
1694	17.9	1.0	1.7	chr12	113335558	113335859	(19939450)	C	AluJb	SINE/Alu	(2)	310	11	951316
131	18.4	2.2	3.7	chr12	113396305	113396624	(19878685)	+	(CCTT)n	Simple_repeat	1	327	(0)	951486
321	27.4	0.0	0.0	chr12	113422146	113422229	(19853080)	+	MIRc	SINE/MIR	65	148	(120)	951560
475	30.8	11.0	2.6	chr12	113787945	113788337	(19486972)	+	L1MC4	LINE/L1	948	1370	(1205)	952505
67	21.3	6.1	4.7	chr12	114698553	114698832	(18576477)	+	(TCTTC)n	Simple_repeat	1	297	(0)	954286
1416	16.1	0.4	1.6	chr12	114708457	114708699	(18566610)	+	AluJo	SINE/Alu	72	311	(1)	954310
17	5.0	0.0	0.0	chr12	114708795	114708815	(18566494)	+	(CT)n	Simple_repeat	1	21	(0)	954311
1806	12.9	2.8	1.8	chr12	114708816	114709101	(18566208)	C	AluSc	SINE/Alu	(18)	291	3	954312
221	39.6	0.4	0.3	chr12	114903718	114904841	(18370468)	+	(GT)n	Simple_repeat	1	1129	(0)	954851
101	40.4	2.6	2.2	chr12	114986064	114986726	(18288583)	+	(CCTC)n	Simple_repeat	1	680	(0)	955030
587	13.4	14.5	5.9	chr12	116143228	116143346	(17131963)	+	FLAM_C	SINE/Alu	2	132	(11)	957420
319	29.3	3.9	2.4	chr12	116143438	116143563	(17131746)	C	Tigger16b	DNA/TcMar-Tigger	(9)	327	200	957421
51	0.0	0.0	0.0	chr12	116276309	116276352	(16998957)	+	(TG)n	Simple_repeat	1	44	(0)	957620
186	31.1	2.2	9.1	chr12	116381152	116381250	(16894059)	C	MIRc	SINE/MIR	(130)	138	47	957891
2194	14.9	9.9	1.2	chr12	116913311	116913717	(16361592)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2273	959275
2291	9.0	0.0	1.3	chr12	118131760	118132070	(15143239)	C	AluSx1	SINE/Alu	(5)	307	1	961933
1528	16.0	0.7	9.1	chr12	118135522	118135736	(15139573)	C	AluJo	SINE/Alu	(113)	199	1	961945
343	17.5	1.7	0.0	chr12	118135834	118135890	(15139419)	C	LSU-rRNA_Hsa	rRNA	(2344)	2691	2634	961947
1631	13.8	11.3	0.0	chr12	118366808	118367075	(14908234)	+	AluSx1	SINE/Alu	1	302	(10)	962441
72	12.7	1.9	4.5	chr12	119850387	119850540	(13424769)	+	G-rich	Low_complexity	1	157	(0)	965612
308	30.9	2.3	0.0	chr12	119850555	119850680	(13424629)	C	MER113A	DNA/hAT-Charlie	(0)	314	186	965613
517	13.3	5.1	0.0	chr12	120292742	120292816	(12982493)	+	AluYe5	SINE/Alu	212	290	(20)	966633
2302	10.0	0.0	1.6	chr12	120357495	120357804	(12917505)	C	AluSx	SINE/Alu	(5)	307	3	966833
474	25.6	0.8	2.9	chr12	120358036	120358172	(12917137)	C	MIRb	SINE/MIR	(79)	189	56	966834
16	9.3	0.0	0.0	chr12	120650403	120650425	(12624884)	+	(AC)n	Simple_repeat	1	23	(0)	967598
12	32.6	0.0	0.0	chr12	120650426	120650447	(12624862)	+	A-rich	Low_complexity	3	47	(0)	967599
359	25.6	0.7	1.8	chr12	120944946	120945054	(12330255)	+	MIRb	SINE/MIR	86	197	(71)	968180
193	26.6	1.5	1.5	chr12	121132450	121132514	(12142795)	+	L2c	LINE/L2	3323	3387	(0)	968622
2263	10.5	1.0	1.9	chr12	121344297	121344611	(11930698)	+	AluSx1	SINE/Alu	1	312	(0)	969167
759	31.5	9.8	3.6	chr12	121344612	121345205	(11930104)	C	L2a	LINE/L2	(227)	3199	2537	969166
52	11.0	3.2	6.2	chr12	121610867	121610991	(11664318)	+	(TTTC)n	Simple_repeat	1	129	(0)	969814
999	10.5	0.0	0.0	chr12	121610993	121611125	(11664184)	C	FLAM_C	SINE/Alu	(10)	133	1	969815
377	23.5	12.6	2.4	chr12	121771849	121772018	(11503291)	+	L1ME4b	LINE/L1	685	874	(18)	970299
48	6.8	8.2	1.9	chr12	121772019	121772116	(11503193)	+	(TTCT)n	Simple_repeat	1	106	(0)	970300
2194	13.0	0.0	0.7	chr12	121772118	121772424	(11502885)	C	AluSx3	SINE/Alu	(1)	310	6	970301
20	13.9	0.0	0.0	chr12	121805690	121805721	(11469588)	+	(T)n	Simple_repeat	1	32	(0)	970357
1524	22.7	4.8	1.1	chr12	122356231	122356591	(10918718)	+	MER119	DNA/hAT-Charlie	3	377	(206)	971611
253	28.7	9.5	11.3	chr12	122399138	122399341	(10875968)	+	MIR1_Amn	SINE/MIR	19	218	(50)	971709
1133	26.3	6.0	3.4	chr12	122417897	122418254	(10857055)	+	L2a	LINE/L2	3055	3422	(4)	971760
206	31.8	5.0	8.6	chr12	122487568	122487777	(10787532)	C	L3	LINE/CR1	(159)	3940	3739	971972
922	28.1	8.8	8.6	chr12	122766972	122767356	(10507953)	+	L2c	LINE/L2	2998	3383	(4)	972633
33	5.6	3.2	4.7	chr12	122834253	122834314	(10440995)	+	(AAAG)n	Simple_repeat	1	64	(0)	972806
46	0.0	0.0	3.9	chr12	122834317	122834367	(10440942)	+	(AAGGA)n	Simple_repeat	1	51	(0)	972807
1875	19.3	1.6	5.8	chr12	123017386	123017901	(10257408)	+	L1MB7	LINE/L1	5584	6030	(154)	973141
31	28.3	1.0	1.0	chr12	123017902	123017984	(10257325)	+	(CCCT)n	Simple_repeat	1	83	(0)	973148
59	0.0	0.0	0.0	chr12	123017985	123018037	(10257272)	+	(TTCC)n	Simple_repeat	1	53	(0)	973149
209	25.4	8.2	6.9	chr12	123153909	123153980	(10121329)	C	MIRc	SINE/MIR	(176)	92	20	973413
766	26.6	16.8	2.5	chr12	123602672	123603383	(9671926)	C	L2a	LINE/L2	(0)	3426	2555	974524
77	7.7	2.5	6.7	chr12	124715107	124715266	(8560043)	+	A-rich	Low_complexity	1	164	(0)	976651
284	29.8	5.3	3.1	chr12	124743102	124743229	(8532080)	C	L2a	LINE/L2	(95)	3331	3201	976724
20	26.6	4.1	4.0	chr12	124743311	124743407	(8531902)	+	A-rich	Low_complexity	1	101	(0)	976725
277	26.4	11.9	1.4	chr12	125193758	125193899	(8081410)	C	L2a	LINE/L2	(54)	3372	3214	977748
211	25.0	2.4	2.4	chr12	130728206	130728864	(2546445)	+	(CACTCG)n	Simple_repeat	1	675	(0)	987117
189	33.3	12.3	3.6	chr12	130934753	130934832	(2340477)	+	L2b	LINE/L2	3064	3161	(214)	987502
15	19.5	2.6	2.6	chr12	130934884	130934895	(2340414)	+	(TC)n	Simple_repeat	1	13	(0)	987504
66	5.4	0.0	0.0	chr12	130934896	130934972	(2340337)	+	(TTTCC)n	Simple_repeat	1	77	(0)	987505
15	19.5	2.6	2.6	chr12	130934973	130934997	(2340312)	+	(TC)n	Simple_repeat	2	26	(0)	987506
26	7.9	0.0	2.3	chr12	130934998	130935040	(2340269)	+	(TCCT)n	Simple_repeat	1	43	(0)	987507
67	6.3	1.2	0.0	chr13	24270993	24271075	(90093253)	+	(CT)n	Simple_repeat	1	84	(0)	1000057
1745	16.4	0.0	3.8	chr13	25281047	25281333	(89082995)	+	AluJo	SINE/Alu	4	279	(33)	1001586
42	13.5	6.0	4.9	chr13	25281335	25281454	(89082874)	+	A-rich	Low_complexity	1	121	(0)	1001587
1604	20.5	13.9	2.4	chr13	26561613	26562121	(87802207)	+	MER119	DNA/hAT-Charlie	7	583	(0)	1003467
207	29.6	4.0	2.7	chr13	27167847	27167919	(87196409)	C	MamRTE1	LINE/RTE-BovB	(3563)	249	176	1004430
1448	27.9	9.1	5.3	chr13	27197611	27198498	(87165830)	C	HAL1ME	LINE/L1	(604)	1861	937	1004499
46	2.3	0.0	0.0	chr13	28139508	28139551	(86224777)	+	(GT)n	Simple_repeat	1	44	(0)	1006222
15	13.7	0.0	0.0	chr13	28139552	28139575	(86224753)	+	(GGGGA)n	Simple_repeat	4	27	(0)	1006223
2186	17.9	4.0	2.2	chr13	28161203	28161618	(86202710)	C	MLT1C	LTR/ERVL-MaLR	(43)	424	1	1006273
22	30.9	0.9	4.4	chr13	28532049	28532161	(85832167)	+	A-rich	Low_complexity	1	114	(0)	1006903
12	13.9	6.8	4.3	chr13	33626458	33626501	(80737827)	+	(ATCT)n	Simple_repeat	1	47	(0)	1014571
14	21.5	4.0	1.9	chr13	33626501	33626550	(80737778)	+	(AATAA)n	Simple_repeat	1	52	(0)	1014572
242	34.0	5.1	3.9	chr13	33723617	33723772	(80640556)	+	Plat_L3	LINE/CR1	3427	3584	(2)	1014704
943	27.3	9.3	7.8	chr13	33820215	33820690	(80543638)	+	LTR16C	LTR/ERVL	4	487	(2)	1014884
210	28.4	4.0	10.4	chr13	33820700	33820805	(80543523)	+	MER5A	DNA/hAT-Charlie	84	182	(7)	1014885
536	34.4	8.8	4.2	chr13	35016623	35017137	(79347191)	C	L2a	LINE/L2	(119)	3307	2750	1016650
1813	17.3	1.3	7.0	chr13	36800094	36800423	(77563905)	+	AluJr	SINE/Alu	2	312	(0)	1019073
72	12.3	1.4	4.0	chr13	36800424	36800567	(77563761)	+	A-rich	Low_complexity	4	143	(0)	1019074
1273	18.4	2.9	8.3	chr13	36800569	36800894	(77563434)	+	L1MB8	LINE/L1	5871	6178	(0)	1019075
458	30.4	5.3	8.0	chr13	37304956	37305205	(77059123)	C	MLT1J	LTR/ERVL-MaLR	(42)	470	228	1019822
1413	12.0	18.4	2.4	chr13	37305264	37305513	(77058815)	C	AluJb	SINE/Alu	(13)	299	1	1019823
57	11.6	1.9	9.2	chr13	37978788	37978948	(76385380)	+	GA-rich	Low_complexity	1	164	(0)	1020683
16	12.2	4.5	1.4	chr13	38606438	38606472	(75757856)	+	A-rich	Low_complexity	1	36	(0)	1021468
182	32.5	13.5	5.7	chr13	39605023	39605198	(74759130)	C	MIRb	SINE/MIR	(1)	267	76	1022865
15	32.2	2.7	2.6	chr13	39693257	39693339	(74670989)	+	(TTCC)n	Simple_repeat	1	83	(0)	1023023
345	27.7	4.1	10.8	chr13	40211076	40211233	(74153095)	C	MIRc	SINE/MIR	(57)	211	65	1023729
934	19.2	0.6	2.8	chr13	40896060	40896236	(73468092)	+	FRAM	SINE/Alu	4	176	(0)	1024859
714	25.3	16.9	5.3	chr13	41232092	41232504	(73131824)	+	HAL1	LINE/L1	893	1375	(1132)	1025481
939	28.4	8.2	1.4	chr13	41232474	41232823	(73131505)	+	HAL1	LINE/L1	1519	1894	(613)	1025481
959	27.0	3.0	5.3	chr13	41827127	41827599	(72536729)	+	HAL1	LINE/L1	2040	2501	(6)	1026410
239	31.4	16.9	1.7	chr13	41940071	41940245	(72424083)	+	MIR3	SINE/MIR	2	208	(0)	1026577
2848	10.7	5.2	1.3	chr13	44055454	44055900	(70308428)	C	MER4C	LTR/ERV1	(0)	465	1	1029711
1075	11.3	0.0	0.0	chr13	44055939	44056079	(70308249)	+	AluSz6	SINE/Alu	163	303	(9)	1029712
473	29.7	4.1	0.0	chr13	45219164	45219296	(69145032)	C	MIRb	SINE/MIR	(52)	178	37	1031820
1966	14.2	0.0	1.7	chr13	46134841	46135136	(68229192)	+	AluSz	SINE/Alu	20	310	(2)	1033407
34	34.3	4.3	2.5	chr13	49113015	49113248	(65251080)	+	(TCTCT)n	Simple_repeat	1	244	(0)	1037862
416	26.6	8.5	8.5	chr13	49838875	49839133	(64525195)	+	MER102a	DNA/hAT-Charlie	55	313	(17)	1039150
43	2.5	0.0	0.0	chr13	49839196	49839236	(64525092)	+	(AC)n	Simple_repeat	1	41	(0)	1039151
589	24.8	4.5	0.0	chr13	50001484	50001632	(64362696)	+	L5	LINE/RTE-X	1837	1992	(273)	1039483
541	31.6	9.1	3.2	chr13	50724657	50725029	(63639299)	C	MLT1I	LTR/ERVL-MaLR	(4)	407	11	1040556
74	20.2	2.7	6.5	chr13	50867287	50867542	(63496786)	+	(CTTT)n	Simple_repeat	1	263	(0)	1040756
2247	10.9	4.4	1.1	chr13	51089342	51089693	(63274635)	+	THE1D	LTR/ERVL-MaLR	1	364	(17)	1041059
323	33.7	3.5	8.1	chr13	51089813	51090083	(63274245)	+	HAL1	LINE/L1	91	348	(2159)	1041060
3635	15.0	3.4	0.8	chr13	51256677	51257315	(63107013)	C	L1MB3	LINE/L1	(2)	6181	5526	1041294
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
350	35.6	6.9	2.1	chr13	51635591	51635825	(62728503)	+	MIR	SINE/MIR	6	252	(10)	1041906
13	12.7	0.0	0.0	chr13	51802795	51802820	(62561508)	+	(CTCCC)n	Simple_repeat	1	26	(0)	1042117
1441	9.3	0.4	13.6	chr13	52968370	52968563	(61395765)	+	L1PB2	LINE/L1	5913	6087	(64)	1043977
73	13.3	1.7	6.2	chr13	59742560	59742733	(54621595)	+	A-rich	Low_complexity	1	177	(0)	1052514
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
13	11.1	7.0	4.3	chr13	70584926	70584968	(43779360)	+	A-rich	Low_complexity	1	46	(0)	1066329
24	17.1	1.5	4.5	chr13	70584994	70585059	(43779269)	+	(TCTTTT)n	Simple_repeat	1	67	(0)	1066330
23	15.4	2.3	0.0	chr13	70585121	70585163	(43779165)	+	(GT)n	Simple_repeat	1	44	(0)	1066331
733	13.1	0.0	0.0	chr13	71780562	71780660	(42583668)	+	AluSx3	SINE/Alu	198	296	(15)	1067910
1902	15.7	0.4	0.7	chr13	71780852	71781131	(42583197)	+	AluJo	SINE/Alu	1	279	(33)	1067911
21	30.4	2.6	0.0	chr13	71864950	71865025	(42499303)	+	GA-rich	Low_complexity	1	78	(0)	1068013
13	23.3	0.0	0.0	chr13	71867794	71867828	(42496500)	+	(TTAT)n	Simple_repeat	1	35	(0)	1068022
21	0.0	0.0	0.0	chr13	72809133	72809155	(41555173)	+	(T)n	Simple_repeat	1	23	(0)	1069378
1591	18.0	2.2	2.5	chr13	73956641	73956918	(40407410)	+	AluJo	SINE/Alu	3	279	(33)	1071304
147	5.7	4.4	0.8	chr13	73956919	73957143	(40407185)	+	(GAAAG)n	Simple_repeat	1	235	(0)	1071305
12	11.2	3.2	3.1	chr13	74046420	74046450	(40317878)	+	A-rich	Low_complexity	1	32	(0)	1071416
1750	10.2	0.0	0.0	chr13	76095648	76095873	(38268455)	C	AluSx1	SINE/Alu	(0)	312	87	1074294
77	18.9	4.8	3.3	chr13	76095874	76096103	(38268225)	+	(TTCCT)n	Simple_repeat	1	241	(0)	1074295
2132	12.2	0.4	0.0	chr13	77285505	77285783	(37078545)	+	AluSp	SINE/Alu	1	280	(33)	1075959
81	4.8	3.5	4.7	chr13	77285784	77285927	(37078401)	+	(GAAAG)n	Simple_repeat	1	149	(0)	1075960
16	0.0	0.0	0.0	chr13	78659296	78659312	(35705016)	+	(A)n	Simple_repeat	1	17	(0)	1077841
28	0.0	0.0	0.0	chr13	78659313	78659339	(35704989)	+	(AAAG)n	Simple_repeat	1	27	(0)	1077842
1592	21.8	0.0	2.0	chr13	79283616	79283908	(35080420)	+	AluJb	SINE/Alu	1	287	(25)	1078710
52	8.5	0.0	6.9	chr13	79283909	79284010	(35080318)	+	A-rich	Low_complexity	1	102	(0)	1078711
328	33.7	5.7	6.4	chr13	79392687	79393092	(34971236)	+	L1MEf	LINE/L1	34	436	(5987)	1078856
896	28.6	18.8	3.0	chr13	79403762	79404773	(34959555)	+	L2a	LINE/L2	1927	3187	(239)	1078869
17	13.1	0.0	0.0	chr13	79492253	79492278	(34872050)	+	(T)n	Simple_repeat	1	26	(0)	1079033
1523	17.3	7.1	1.1	chr13	79492409	79492685	(34871643)	C	AluJr	SINE/Alu	(17)	295	1	1079034
10699	18.9	3.8	1.4	chr13	79813504	79815141	(34549187)	C	L1MB8	LINE/L1	(355)	5823	4149	1079455
85	0.0	0.7	9.8	chr13	79815142	79815283	(34549045)	+	(CCTTT)n	Simple_repeat	1	143	(0)	1079457
10699	18.7	4.2	0.9	chr13	79815284	79816625	(34547703)	C	L1MB8	LINE/L1	(1998)	4148	2752	1079455
2161	19.2	0.0	4.3	chr13	83193380	83193846	(31170482)	+	L1MA6	LINE/L1	3759	4205	(1941)	1083705
3740	18.3	6.6	2.0	chr13	83193846	83195348	(31168980)	+	L1MA6	LINE/L1	4885	6268	(32)	1083705
463	24.4	6.2	2.7	chr13	85462960	85463144	(28901184)	+	MER53	DNA/hAT	2	193	(0)	1086583
225	29.0	1.6	1.6	chr13	87026075	87026137	(27338191)	C	L3	LINE/CR1	(33)	4066	4004	1088465
207	36.6	0.0	1.2	chr13	87026170	87026252	(27338076)	C	L3	LINE/CR1	(184)	3915	3834	1088465
72	29.0	2.1	3.4	chr13	87709947	87710235	(26654093)	+	(CCTT)n	Simple_repeat	1	295	(0)	1089360
109	5.6	0.6	2.5	chr13	91057667	91057824	(23306504)	+	(GGAAA)n	Simple_repeat	1	159	(0)	1093711
16	16.1	0.0	0.0	chr13	93417233	93417260	(20947068)	+	(T)n	Simple_repeat	1	28	(0)	1096881
1623	20.9	1.3	1.3	chr13	95394889	95395199	(18969129)	+	AluJb	SINE/Alu	2	312	(0)	1100013
42	8.5	0.0	0.0	chr13	95395200	95395257	(18969071)	+	(AAGA)n	Simple_repeat	2	59	(0)	1100014
95	0.0	0.0	0.0	chr13	95395258	95395341	(18968987)	+	(GAAAG)n	Simple_repeat	1	84	(0)	1100015
872	21.7	4.5	12.8	chr13	95395363	95395605	(18968723)	C	LTR29	LTR/ERV1	(422)	222	1	1100012
437	26.0	14.5	3.8	chr13	95559783	95559966	(18804362)	+	MIRb	SINE/MIR	40	246	(22)	1100338
263	31.1	2.2	7.2	chr13	95679621	95679814	(18684514)	+	L1MA9	LINE/L1	6091	6274	(38)	1100529
13	13.4	6.1	0.0	chr13	97141833	97141865	(17222463)	+	(CAGAGG)n	Simple_repeat	1	35	(0)	1102578
3365	20.1	2.2	3.3	chr13	98305628	98306260	(16058068)	C	Tigger6a	DNA/TcMar-Tigger	(438)	645	13	1104462
1351	13.8	4.0	3.1	chr13	99375794	99376017	(14988311)	C	AluJb	SINE/Alu	(2)	310	85	1106151
256	31.9	2.1	6.0	chr13	99911834	99911933	(14452395)	+	MER131	DNA?	34	129	(86)	1107022
33	14.8	2.7	2.6	chr13	100059968	100060041	(14304287)	+	(TTTC)n	Simple_repeat	1	76	(0)	1107317
313	21.4	2.4	4.8	chr13	100060044	100060127	(14304201)	C	FAM	SINE/Alu	(6)	179	98	1107318
2627	21.7	12.1	3.0	chr13	100132205	100132780	(14231548)	C	L1MD2	LINE/L1	(229)	6528	5876	1107461
14909	12.3	3.4	1.5	chr13	100344707	100346879	(14017449)	+	Tigger1	DNA/TcMar-Tigger	1	2224	(194)	1107829
2774	21.0	2.4	4.8	chr13	107333146	107333649	(7030679)	C	Tigger17a	DNA/TcMar-Tigger	(152)	502	1	1117306
17	12.4	2.9	0.0	chr13	112672915	112672949	(1691379)	+	(CTTT)n	Simple_repeat	1	36	(0)	1123808
29	4.7	0.0	6.0	chr13	112672962	112673011	(1691317)	+	(TCTT)n	Simple_repeat	1	50	(0)	1123809
41	15.9	4.5	3.4	chr13	112673028	112673139	(1691189)	+	(TTTC)n	Simple_repeat	1	117	(0)	1123810
1894	12.1	0.0	5.0	chr13	113145180	113145314	(1219014)	C	AluSx1	SINE/Alu	(167)	145	12	1124238
558	22.8	3.3	0.0	chr13	113145428	113145569	(1218759)	+	MER53	DNA/hAT	20	166	(27)	1124240
1641	23.9	11.0	7.7	chr13	113190054	113190814	(1173514)	+	L1MEf	LINE/L1	1049	1808	(4392)	1124305
1856	6.7	9.7	2.6	chr13	114280990	114281258	(83070)	+	AluSz	SINE/Alu	1	290	(22)	1125452
2183	20.6	15.8	4.5	chr13	114315000	114315813	(48515)	+	L1MB8	LINE/L1	5202	6127	(51)	1125512
103	20.9	2.4	5.4	chr14	20495478	20495805	(86547913)	+	(TTCCT)n	Simple_repeat	1	336	(0)	1128147
559	23.2	0.0	10.4	chr14	20495811	20495993	(86547725)	C	L1MC5a	LINE/L1	(11)	2766	2603	1128148
641	4.0	0.0	0.0	chr14	21453236	21453309	(85590409)	+	AluSx4	SINE/Alu	61	134	(176)	1129777
1896	10.3	0.0	3.7	chr14	21454345	21454616	(85589102)	C	AluSz	SINE/Alu	(39)	273	12	1129780
317	31.5	13.4	4.2	chr14	24011021	24011214	(83032504)	C	L1MEd	LINE/L1	(5881)	1205	1006	1133651
30	6.1	0.0	0.0	chr14	24011215	24011249	(83032469)	+	(TC)n	Simple_repeat	1	35	(0)	1133652
317	31.5	13.4	4.2	chr14	24011250	24011385	(83032333)	C	L1MEd	LINE/L1	(6081)	1005	841	1133651
21036	17.4	1.4	1.6	chr14	24011391	24015051	(83028667)	C	HERVK-int	LTR/ERVK	(3880)	3656	1	1133650
14	8.1	0.0	6.7	chr14	30958541	30958570	(76085148)	+	(TGT)n	Simple_repeat	1	30	(0)	1142597
13	18.2	2.6	2.5	chr14	45224226	45224264	(61819454)	+	(TTCACT)n	Simple_repeat	1	40	(0)	1162875
1536	15.4	3.5	8.6	chr14	49594789	49595115	(57448603)	+	MER65D	LTR/ERV1	154	463	(10)	1168231
474	29.1	10.2	0.0	chr14	49865323	49865480	(57178238)	+	MLT1J	LTR/ERVL-MaLR	13	188	(324)	1168785
28	22.6	0.0	0.0	chr14	49894421	49894478	(57149240)	+	(T)n	Simple_repeat	1	58	(0)	1168854
241	12.2	6.8	0.0	chr14	50094338	50094378	(56949340)	C	LTR104_Mam	LTR/Gypsy	(441)	1068	1025	1169254
1426	18.7	5.2	3.2	chr14	50094472	50094755	(56948963)	C	AluJr	SINE/Alu	(22)	290	1	1169255
865	27.5	3.9	2.9	chr14	54504987	54505263	(52538455)	+	LTR81A	LTR/Gypsy	152	431	(919)	1176025
1941	10.9	6.2	1.6	chr14	54505303	54505609	(52538109)	C	LTR47B4	LTR/ERVL	(0)	434	113	1176027
129	0.7	1.8	5.3	chr14	55646414	55646581	(51397137)	+	(TTTCC)n	Simple_repeat	1	171	(0)	1178067
1658	9.6	11.9	0.0	chr14	56054586	56054815	(50988903)	C	AluSx4	SINE/Alu	(11)	299	39	1178713
36	21.1	6.4	4.4	chr14	56054816	56054951	(50988767)	+	(TCCTTTC)n	Simple_repeat	1	138	(0)	1178714
504	34.1	6.5	1.5	chr14	58242525	58242570	(48801148)	+	L2a	LINE/L2	2572	2620	(799)	1181901
1575	20.1	6.6	2.1	chr14	58242571	58242947	(48800771)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	1181902
20	18.9	1.7	3.4	chr14	60645819	60645876	(46397842)	+	(CTCTTT)n	Simple_repeat	1	59	(0)	1185326
18	17.9	0.0	0.0	chr14	60646003	60646034	(46397684)	+	(T)n	Simple_repeat	1	32	(0)	1185327
17	18.5	0.0	0.0	chr14	63854164	63854194	(43189524)	+	(T)n	Simple_repeat	1	31	(0)	1190227
789	27.5	7.0	5.2	chr14	64883540	64884076	(42159642)	+	HAL1ME	LINE/L1	881	1427	(1038)	1192031
84	3.0	0.9	3.6	chr14	65005434	65005542	(42038176)	+	(CTTT)n	Simple_repeat	1	110	(0)	1192254
25	15.9	0.0	8.1	chr14	65005547	65005620	(42038098)	+	(TCTT)n	Simple_repeat	1	74	(0)	1192255
36	18.8	3.3	5.6	chr14	65005621	65005665	(42038053)	+	(TCCTG)n	Simple_repeat	4	126	(0)	1192256
785	26.2	8.5	0.0	chr14	69118673	69118909	(37924809)	+	MIR	SINE/MIR	2	260	(2)	1198888
269	22.1	3.8	0.0	chr14	70714242	70714318	(36329400)	C	Charlie1a	DNA/hAT-Charlie	(45)	1410	1331	1201616
120	26.7	6.7	0.8	chr14	70822242	70822735	(36220983)	+	(CT)n	Simple_repeat	1	527	(0)	1201805
272	31.6	0.0	0.0	chr14	70898516	70898594	(36145124)	C	L2c	LINE/L2	(1357)	2062	1984	1201940
239	20.0	3.0	3.0	chr14	71409450	71409516	(35634202)	+	L1MD3	LINE/L1	6450	6516	(1479)	1202770
630	27.9	1.4	0.5	chr14	71409589	71409797	(35633921)	+	L1MC4	LINE/L1	7704	7914	(128)	1202771
41	29.9	1.2	3.5	chr14	73103191	73103373	(33940345)	+	G-rich	Low_complexity	1	178	(0)	1205529
29	37.1	0.7	0.7	chr14	73103291	73103439	(33940279)	+	(CGAGAC)n	Simple_repeat	1	150	(0)	1205530
2244	10.7	0.3	0.0	chr14	73236535	73236834	(33806884)	+	AluSq2	SINE/Alu	1	301	(12)	1205804
45	23.4	3.1	4.3	chr14	73236843	73237001	(33806717)	+	A-rich	Low_complexity	1	164	(0)	1205805
223	30.3	14.2	1.7	chr14	73237002	73237179	(33806539)	C	L2c	LINE/L2	(247)	3140	2937	1205799
2104	12.7	3.9	2.6	chr14	73588919	73589298	(33454420)	C	L1MC1	LINE/L1	(13)	6320	5936	1206630
1859	18.6	1.6	0.0	chr14	73589312	73589618	(33454100)	C	AluSz	SINE/Alu	(0)	312	1	1206631
3965	12.1	6.6	0.3	chr14	73663667	73664265	(33379453)	C	MER61F	LTR/ERV1	(37)	639	1	1206809
29	12.9	0.0	0.0	chr14	73816342	73816407	(33227311)	+	(GA)n	Simple_repeat	1	66	(0)	1207127
15	13.5	2.8	5.4	chr14	73816524	73816559	(33227159)	+	(TG)n	Simple_repeat	1	37	(0)	1207128
13	15.7	9.6	1.8	chr14	73816560	73816575	(33227143)	+	(TGTGATG)n	Simple_repeat	1	57	(0)	1207129
16	27.8	0.0	0.0	chr14	73950046	73950091	(33093627)	+	(CAGCGA)n	Simple_repeat	1	46	(0)	1207453
60	15.9	4.1	0.0	chr14	75068468	75068588	(31975130)	+	GA-rich	Low_complexity	1	126	(0)	1209670
799	28.9	5.0	3.5	chr14	75425486	75425740	(31617978)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	337	1210442
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
227	14.2	2.1	3.9	chr14	76538858	76539338	(30504380)	+	(TCCCT)n	Simple_repeat	1	491	(0)	1212409
198	32.4	2.6	1.3	chr14	76539364	76539438	(30504280)	+	MIRb	SINE/MIR	110	185	(83)	1212410
952	27.9	6.3	1.9	chr14	76566215	76566590	(30477128)	C	LTR16C	LTR/ERVL	(0)	489	96	1212484
1215	11.3	0.0	0.0	chr14	76566768	76566926	(30476792)	C	AluJo	SINE/Alu	(153)	159	1	1212485
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
11	18.9	5.8	6.8	chr14	76962137	76962144	(30081574)	+	(CTCACT)n	Simple_repeat	1	70	(0)	1213304
15	17.0	5.2	4.9	chr14	76962145	76962202	(30081516)	+	(TCACTT)n	Simple_repeat	1	61	(0)	1213305
337	33.7	1.8	0.7	chr14	81644890	81645028	(25398690)	+	MLT1J2	LTR/ERVL-MaLR	1	144	(304)	1220966
376	35.7	6.4	7.3	chr14	87442524	87443130	(19600588)	C	L2c	LINE/L2	(223)	3164	2566	1228963
27	54.5	0.0	0.0	chr14	87443131	87443353	(19600365)	+	A-rich	Low_complexity	1	223	(0)	1228967
51	30.3	2.1	2.6	chr14	87443362	87443550	(19600168)	+	G-rich	Low_complexity	1	193	(0)	1228968
53	23.4	0.7	3.4	chr14	90742213	90742358	(16301360)	+	(TTTC)n	Simple_repeat	1	147	(0)	1234383
834	16.4	0.0	0.0	chr14	90742361	90742482	(16301236)	C	AluJb	SINE/Alu	(190)	122	1	1234382
1627	20.9	0.3	2.5	chr14	90983323	90983637	(16060081)	+	AluSz	SINE/Alu	5	312	(0)	1234791
2933	26.0	12.7	9.3	chr14	90983638	90983781	(16059937)	+	Charlie24	DNA/hAT-Charlie	1299	1330	(1120)	1234787
57	1.9	0.0	0.0	chr14	90983788	90983840	(16059878)	+	(TC)n	Simple_repeat	1	53	(0)	1234792
22	14.6	4.5	4.3	chr14	91392735	91392800	(15650918)	+	(CTCACT)n	Simple_repeat	1	69	(0)	1235620
14	17.5	0.0	0.0	chr14	91947986	91948017	(15095701)	+	G-rich	Low_complexity	1	32	(0)	1236596
2134	13.7	0.0	2.2	chr14	92351575	92351887	(14691831)	+	AluSz6	SINE/Alu	1	306	(6)	1237402
48	7.7	4.7	4.5	chr14	92351888	92351978	(14691740)	+	A-rich	Low_complexity	14	105	(0)	1237403
10581	20.5	2.4	3.9	chr14	92760206	92763541	(14280177)	+	HERVH-int	LTR/ERV1	1	3260	(4453)	1238184
44	8.9	2.0	7.0	chr14	92865450	92865547	(14178171)	+	(CTTT)n	Simple_repeat	1	100	(0)	1238378
1500	16.5	8.5	1.8	chr14	92865549	92865821	(14177897)	C	AluJr	SINE/Alu	(17)	295	3	1238379
482	30.2	9.4	2.6	chr14	95155007	95155249	(11888469)	+	MIR	SINE/MIR	5	252	(10)	1242511
28	27.1	3.5	5.4	chr14	96038096	96038256	(11005462)	+	GA-rich	Low_complexity	1	157	(0)	1244134
241	30.6	3.7	3.5	chr14	96038310	96038460	(11005258)	+	MIR3	SINE/MIR	58	218	(50)	1244135
795	16.9	1.4	0.7	chr14	99981776	99981912	(7061806)	C	Tigger1a_Art	DNA/TcMar-Tigger	(359)	138	1	1250951
336	28.3	12.4	6.8	chr14	99982091	99982355	(7061363)	C	L1ME4a	LINE/L1	(70)	6054	5773	1250952
253	25.0	0.0	1.5	chr14	99982371	99982435	(7061283)	C	L1ME4a	LINE/L1	(485)	5639	5576	1250952
890	11.0	0.0	0.0	chr14	100262608	100262725	(6780993)	C	AluSg7	SINE/Alu	(3)	306	189	1251561
14	17.8	4.3	2.1	chr14	100849759	100849804	(6193914)	+	A-rich	Low_complexity	1	48	(0)	1252486
405	26.8	6.7	7.2	chr14	101130428	101130636	(5913082)	+	L1MEd	LINE/L1	1007	1214	(5872)	1252782
512	28.3	12.7	3.2	chr14	101788714	101789279	(5254439)	C	L1MEd	LINE/L1	(1462)	4684	4066	1253649
1383	19.5	11.9	3.6	chr14	102163651	102163697	(4880021)	+	MSTD	LTR/ERVL-MaLR	358	396	(0)	1254385
79	6.9	0.9	0.9	chr14	102525619	102525727	(4517991)	+	(TTCC)n	Simple_repeat	1	110	(0)	1255090
71	20.1	4.4	2.8	chr14	102525728	102525924	(4517794)	+	(CTTT)n	Simple_repeat	1	201	(0)	1255091
1069	33.3	7.7	1.6	chr14	102622317	102622877	(4420841)	+	L2a	LINE/L2	88	685	(2734)	1255345
112	0.0	0.0	3.5	chr14	102632612	102632727	(4410991)	+	(TCCTT)n	Simple_repeat	1	116	(0)	1255372
13	24.0	4.8	0.0	chr14	102775020	102775061	(4268657)	+	GA-rich	Low_complexity	1	44	(0)	1255664
31	0.0	0.0	0.0	chr14	102779270	102779298	(4264420)	+	(T)n	Simple_repeat	1	29	(0)	1255673
1123	21.5	8.8	0.0	chr14	103395507	103395776	(3647942)	C	HAL1	LINE/L1	(660)	1847	1552	1256739
1176	24.7	7.2	1.7	chr14	105033695	105034048	(2009670)	+	MER4-int	LTR/ERV1	1850	2224	(4107)	1259129
18	36.9	3.2	0.0	chr15	25380545	25380637	(76610552)	+	A-rich	Low_complexity	1	96	(0)	1269918
100	13.1	4.6	1.0	chr15	33699217	33699412	(68291777)	+	(TC)n	Simple_repeat	1	205	(0)	1281669
1426	23.7	3.4	0.0	chr15	34043755	34044092	(67947097)	+	L2c	LINE/L2	1459	1808	(1611)	1282178
2219	13.3	0.3	0.3	chr15	35714143	35714451	(66276738)	+	AluSx	SINE/Alu	2	310	(2)	1284732
16	27.5	0.0	4.9	chr15	35714483	35714543	(66276646)	+	(TTCC)n	Simple_repeat	1	61	(0)	1284733
6998	7.1	1.1	0.1	chr15	35714668	35716369	(66274820)	C	L1PA8	LINE/L1	(13)	6159	4445	1284734
20	16.4	2.7	7.9	chr15	36950054	36950127	(65041062)	+	GA-rich	Low_complexity	1	76	(0)	1286325
46	18.7	0.0	0.0	chr15	37100238	37100328	(64890861)	+	(TCTC)n	Simple_repeat	1	91	(0)	1286510
33	14.5	0.0	0.0	chr15	37100691	37100744	(64890445)	+	(GT)n	Simple_repeat	1	54	(0)	1286512
18	17.3	0.0	2.8	chr15	37100727	37100762	(64890427)	+	(GC)n	Simple_repeat	1	36	(0)	1286513
23	17.4	4.9	1.9	chr15	37100766	37100818	(64890371)	+	GA-rich	Low_complexity	1	54	(0)	1286514
30	42.3	1.0	4.3	chr15	39573596	39573897	(62417292)	+	A-rich	Low_complexity	1	305	(0)	1289879
709	29.8	5.7	5.0	chr15	39681600	39681963	(62309226)	C	L4_A_Mam	LINE/RTE-X	(21)	4969	4603	1290007
1284	23.9	10.7	1.4	chr15	39783543	39784004	(62207185)	+	L2a	LINE/L2	2306	3001	(425)	1290166
4011	19.7	6.3	0.3	chr15	39784005	39784784	(62206405)	C	MER99	DNA/hAT?	(0)	831	2	1290167
121	24.4	2.5	7.4	chr15	41651523	41651959	(60339230)	+	(CTTCC)n	Simple_repeat	1	416	(0)	1293843
59	28.4	2.6	0.5	chr15	41689249	41689437	(60301752)	+	(CTCT)n	Simple_repeat	1	194	(0)	1293920
13	13.2	0.0	0.0	chr15	41689492	41689516	(60301673)	+	(TATT)n	Simple_repeat	1	25	(0)	1293921
1678	16.2	0.7	6.0	chr15	43749647	43749960	(58241229)	+	AluJb	SINE/Alu	2	298	(14)	1297545
1191	9.2	22.5	5.0	chr15	43750076	43750314	(58240875)	C	AluSx3	SINE/Alu	(17)	294	2	1297546
407	27.5	11.8	5.2	chr15	52171169	52171475	(49819714)	+	L1ME4a	LINE/L1	5772	6101	(23)	1310849
1208	23.0	13.8	5.2	chr15	56018072	56018393	(45972796)	+	MER34C2	LTR/ERV1	1	364	(423)	1316576
3032	19.9	8.2	2.2	chr15	56227272	56228349	(45762840)	C	L1MCa	LINE/L1	(4006)	2411	1208	1316864
18697	12.9	1.7	4.3	chr15	56518685	56523778	(45467411)	+	L1PA15-16	LINE/L1	1222	6175	(694)	1317227
12	23.5	2.5	0.0	chr15	57085809	57085848	(44905341)	+	(CTTATGG)n	Simple_repeat	1	41	(0)	1318132
811	24.6	1.1	1.1	chr15	58332653	58332829	(43658360)	C	MIR3	SINE/MIR	(31)	177	1	1319985
1743	18.5	1.4	0.3	chr15	59189071	59189357	(42801832)	C	AluJb	SINE/Alu	(21)	291	2	1321591
27	10.8	1.8	3.6	chr15	59189365	59189419	(42801770)	+	(TTCCT)n	Simple_repeat	1	56	(0)	1321592
412	15.0	0.0	0.0	chr15	59189421	59189480	(42801709)	C	AluSz6	SINE/Alu	(13)	299	240	1321593
487	15.3	0.0	0.0	chr15	59189494	59189565	(42801624)	C	AluSz6	SINE/Alu	(1)	311	240	1321594
1530	18.6	1.9	3.8	chr15	59950866	59951183	(42040006)	+	AluJo	SINE/Alu	1	312	(0)	1323017
34	0.0	9.4	0.0	chr15	59951185	59951238	(42039951)	+	(AAAGGA)n	Simple_repeat	1	59	(0)	1323018
1915	15.7	4.9	2.4	chr15	59951241	59951618	(42039571)	+	MSTB1	LTR/ERVL-MaLR	45	432	(0)	1323016
14	4.5	0.0	4.0	chr15	59997380	59997404	(41993785)	+	(CTTT)n	Simple_repeat	1	25	(0)	1323095
33	17.9	0.0	0.0	chr15	59997468	59997526	(41993663)	+	GA-rich	Low_complexity	1	59	(0)	1323096
20	21.1	0.0	0.0	chr15	60006915	60006953	(41984236)	+	A-rich	Low_complexity	1	39	(0)	1323103
684	15.8	4.0	0.8	chr15	60349574	60349694	(41641495)	+	L1PB2	LINE/L1	6014	6138	(13)	1323642
48	30.4	2.6	0.0	chr15	60349696	60349851	(41641338)	+	GA-rich	Low_complexity	1	160	(0)	1323643
63	28.1	2.5	3.6	chr15	62631423	62631518	(39359671)	+	(TTCC)n	Simple_repeat	1	95	(0)	1327200
60	1.6	1.6	0.0	chr15	62631519	62631580	(39359609)	+	(TTCCT)n	Simple_repeat	1	63	(0)	1327201
63	28.1	2.5	3.6	chr15	62631581	62631726	(39359463)	+	(TTCC)n	Simple_repeat	4	147	(0)	1327202
629	25.1	10.3	1.8	chr15	63120927	63121262	(38869927)	+	ORSL-2b	DNA/hAT-Tip100	106	473	(35)	1327993
21	14.1	2.0	3.9	chr15	63121350	63121400	(38869789)	+	A-rich	Low_complexity	1	52	(0)	1327994
215	23.4	0.0	0.0	chr15	63121411	63121457	(38869732)	C	L2a	LINE/L2	(25)	3401	3355	1327995
64	12.1	4.0	1.5	chr15	63227870	63227994	(38763195)	+	(TCTTT)n	Simple_repeat	1	130	(0)	1328197
1893	16.9	1.6	4.4	chr15	63227996	63228315	(38762874)	C	AluJo	SINE/Alu	(1)	311	1	1328198
3499	22.2	11.2	5.5	chr15	63777993	63779575	(38211614)	+	L1MC4	LINE/L1	7	2692	(3522)	1329107
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
46	0.0	0.0	0.0	chr15	65368161	65368199	(36622990)	+	(CA)n	Simple_repeat	1	39	(0)	1332471
296	27.7	15.4	1.4	chr15	65436012	65436150	(36555039)	C	MIRb	SINE/MIR	(82)	186	25	1332625
59	0.0	0.0	0.0	chr15	65436306	65436355	(36554834)	+	(TG)n	Simple_repeat	1	50	(0)	1332626
1595	21.7	7.8	6.1	chr15	65676167	65676364	(36314825)	+	L1MC4a	LINE/L1	5949	6059	(1823)	1333112
11102	12.5	3.2	3.2	chr15	65681867	65683204	(36307985)	C	Tigger1	DNA/TcMar-Tigger	(1063)	1355	2	1333120
15	14.0	2.2	6.5	chr15	65787431	65787475	(36203714)	+	(TCTT)n	Simple_repeat	1	46	(0)	1333336
332	24.8	8.0	8.0	chr15	65792875	65793036	(36198153)	+	MIR	SINE/MIR	101	262	(0)	1333346
2426	10.9	0.3	1.0	chr15	65800521	65800831	(36190358)	+	AluSg	SINE/Alu	2	310	(0)	1333364
364	33.2	6.3	13.0	chr15	65819740	65820216	(36170973)	+	L2c	LINE/L2	2941	3383	(4)	1333402
45	9.6	4.1	4.0	chr15	65820243	65820339	(36170850)	+	(TTTCT)n	Simple_repeat	1	101	(0)	1333403
2309	12.9	1.0	0.0	chr15	65820342	65820644	(36170545)	C	AluSx1	SINE/Alu	(2)	310	5	1333404
407	28.8	4.6	2.7	chr15	65824176	65824325	(36166864)	C	MIRb	SINE/MIR	(112)	156	4	1333414
491	19.9	16.9	4.3	chr15	65824397	65824606	(36166583)	+	MIRc	SINE/MIR	3	244	(24)	1333415
1586	23.1	15.8	3.1	chr15	66342836	66343582	(35647607)	+	Charlie7	DNA/hAT-Charlie	28	887	(1725)	1334474
446	25.4	10.9	2.8	chr15	66343595	66343717	(35647472)	+	Charlie7	DNA/hAT-Charlie	943	1079	(1533)	1334475
1551	11.2	0.5	0.9	chr15	66472105	66472318	(35518871)	+	AluSx1	SINE/Alu	85	297	(15)	1334771
268	27.1	15.3	4.1	chr15	66472329	66472594	(35518595)	C	MLT1K	LTR/ERVL-MaLR	(166)	429	129	1334772
15	21.5	0.0	4.3	chr15	67024405	67024451	(34966738)	+	A-rich	Low_complexity	1	47	(0)	1335907
388	18.1	0.0	0.0	chr15	67027866	67027937	(34963252)	C	L1MB3	LINE/L1	(36)	6147	6076	1335921
370	24.2	7.7	4.0	chr15	67028128	67028252	(34962937)	+	MIR	SINE/MIR	11	140	(122)	1335922
242	34.2	6.9	1.5	chr15	67030345	67030549	(34960640)	+	MamRep434	DNA/TcMar-Tigger	181	397	(29)	1335927
1511	13.7	3.2	14.0	chr15	67040772	67041122	(34950067)	+	AluJr	SINE/Alu	1	312	(0)	1335952
366	30.5	15.3	3.7	chr15	67063858	67064075	(34927114)	+	MIRb	SINE/MIR	7	254	(14)	1336012
2293	8.1	0.0	7.2	chr15	67150799	67151158	(34840031)	C	AluSx1	SINE/Alu	(0)	312	1	1336161
2566	7.0	0.0	1.3	chr15	67164030	67164344	(34826845)	+	AluY	SINE/Alu	1	311	(0)	1336191
75	17.4	2.8	5.5	chr15	67321416	67321646	(34669543)	+	(TTCC)n	Simple_repeat	1	224	(0)	1336426
1456	16.6	12.0	0.7	chr15	67555166	67555475	(34435714)	C	MSTB	LTR/ERVL-MaLR	(76)	350	1	1336806
203	33.6	6.6	2.6	chr15	67841097	67841212	(34149977)	C	L2c	LINE/L2	(1)	3386	3266	1337206
3644	22.5	11.5	3.4	chr15	68081592	68082923	(33908266)	+	HAL1	LINE/L1	1033	2486	(21)	1337710
989	26.7	17.1	1.1	chr15	68252614	68253064	(33738125)	+	L1ME3F	LINE/L1	5683	6220	(23)	1338002
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
13	28.5	1.3	6.6	chr15	68819904	68819978	(33171211)	+	GA-rich	Low_complexity	1	76	(0)	1339120
297	37.3	3.4	4.7	chr15	69075090	69075300	(32915889)	+	L2b	LINE/L2	3148	3355	(20)	1339574
2346	24.1	14.5	3.7	chr15	69080205	69081232	(32909957)	C	L1M7	LINE/L1	(5053)	1165	8	1339588
32	23.3	4.1	7.9	chr15	69121535	69121729	(32869460)	+	(CTTCC)n	Simple_repeat	1	203	(0)	1339663
12	20.1	5.0	0.0	chr15	69130225	69130264	(32860925)	+	(CTTTTA)n	Simple_repeat	1	42	(0)	1339688
1146	10.4	0.0	3.0	chr15	69165069	69165236	(32825953)	C	L1PA11	LINE/L1	(3)	6171	6009	1339747
249	34.5	1.7	1.0	chr15	69165365	69165490	(32825699)	+	L2c	LINE/L2	2997	3125	(262)	1339748
195	0.9	4.8	1.2	chr15	69678367	69678595	(32312594)	+	(CTTTC)n	Simple_repeat	1	240	(0)	1340702
313	27.8	2.2	1.1	chr15	69686221	69686311	(32304878)	+	L3	LINE/CR1	3501	3592	(507)	1340716
262	28.9	0.9	3.4	chr15	69686359	69686476	(32304713)	+	L1M5	LINE/L1	5365	5479	(715)	1340717
869	18.7	0.0	0.0	chr15	69686479	69686612	(32304577)	+	FLAM_C	SINE/Alu	2	135	(8)	1340718
115	26.1	2.1	4.6	chr15	69832210	69832633	(32158556)	+	G-rich	Low_complexity	1	433	(0)	1340993
218	24.1	11.1	2.5	chr15	69832656	69832753	(32158436)	+	MIR3	SINE/MIR	38	151	(117)	1340994
1170	26.6	12.8	2.1	chr15	70351487	70352087	(31639102)	+	L2a	LINE/L2	2736	3424	(2)	1341997
15664	11.8	2.1	1.5	chr15	70929210	70931590	(31059599)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	23	1342984
1681	12.1	0.4	10.4	chr15	71124761	71125067	(30866122)	+	AluJo	SINE/Alu	1	276	(36)	1343248
17	31.2	3.6	4.4	chr15	71125072	71125181	(30866008)	+	A-rich	Low_complexity	1	114	(0)	1343249
810	21.4	5.1	6.8	chr15	71736668	71736948	(30254241)	C	MamGypLTR1a	LTR/Gypsy	(508)	276	1	1344261
229	26.6	8.9	0.9	chr15	72074298	72074411	(29916778)	+	L1MC2	LINE/L1	24	147	(6276)	1344853
15	3.8	7.4	0.0	chr15	72074421	72074447	(29916742)	+	(AAC)n	Simple_repeat	1	29	(0)	1344854
2569	25.8	10.7	11.7	chr15	72107542	72108762	(29882427)	+	L1MC5a	LINE/L1	1432	2576	(201)	1344909
503	37.9	6.4	0.8	chr15	72113124	72113506	(29877683)	C	L2c	LINE/L2	(71)	3316	2911	1344925
989	31.8	9.6	5.0	chr15	72127076	72127892	(29863297)	C	L2a	LINE/L2	(0)	3426	2564	1344942
2468	9.1	0.0	0.0	chr15	72135053	72135361	(29855828)	C	AluSx1	SINE/Alu	(3)	309	1	1344964
303	37.7	0.2	0.0	chr15	72135464	72135593	(29855596)	C	MIR3	SINE/MIR	(116)	152	22	1344965
812	1.1	0.0	0.0	chr15	72228377	72228464	(29762725)	C	AluYc	SINE/Alu	(11)	288	201	1345104
225	33.8	1.4	0.0	chr15	72271538	72271608	(29719581)	C	MIR3	SINE/MIR	(50)	158	87	1345169
12	22.6	1.9	5.6	chr15	72723251	72723303	(29267886)	+	A-rich	Low_complexity	1	54	(0)	1346000
50	25.1	2.1	4.2	chr15	73200437	73200622	(28790567)	+	G-rich	Low_complexity	1	190	(0)	1346770
1521	29.4	12.0	1.7	chr15	73200640	73200670	(28790519)	C	L1MCa	LINE/L1	(2777)	3784	3756	1346771
1274	10.4	0.0	0.0	chr15	73539283	73539471	(28451718)	C	AluYh3	SINE/Alu	(0)	311	119	1347301
1435	12.1	2.3	0.6	chr15	73996879	73997125	(27994064)	C	MER51A	LTR/ERV1	(0)	640	398	1348066
1371	12.7	0.0	0.0	chr15	73997124	73997328	(27993861)	C	MER51A	LTR/ERV1	(429)	205	1	1348066
2409	9.7	0.0	1.0	chr15	74211394	74211703	(27779486)	C	AluSp	SINE/Alu	(6)	307	1	1348449
251	33.5	7.1	5.4	chr15	74212611	74212679	(27778510)	+	MIR3	SINE/MIR	34	98	(110)	1348450
3509	15.5	5.1	3.9	chr15	74212680	74212936	(27778253)	+	MER39B	LTR/ERV1	1	273	(380)	1348451
24	12.2	0.0	0.0	chr15	74222510	74222545	(27768644)	+	(T)n	Simple_repeat	1	36	(0)	1348472
18	18.3	1.9	3.7	chr15	74222760	74222767	(27768422)	+	(CCCCAC)n	Simple_repeat	1	24	(30)	1348473
17	18.4	0.0	0.0	chr15	74317878	74317883	(27673306)	+	(TTTGTT)n	Simple_repeat	1	33	(0)	1348644
22	3.8	0.0	0.0	chr15	74317884	74317910	(27673279)	+	(T)n	Simple_repeat	1	27	(0)	1348645
509	29.0	7.3	3.4	chr15	74394682	74394747	(27596442)	C	L1MC5a	LINE/L1	(2141)	636	573	1348762
2194	9.5	3.1	0.0	chr15	74394748	74395030	(27596159)	C	AluSz6	SINE/Alu	(20)	292	1	1348763
13	5.7	10.0	4.5	chr15	74950446	74950485	(27040704)	+	(TTCC)n	Simple_repeat	1	44	(0)	1349856
19	12.2	4.1	3.9	chr15	74950486	74950493	(27040696)	+	(TTTCC)n	Simple_repeat	2	51	(0)	1349857
313	33.0	7.0	6.1	chr15	75713456	75713652	(26277537)	C	MIRc	SINE/MIR	(68)	200	2	1351392
300	27.1	0.0	1.2	chr15	76691920	76692005	(25299184)	+	L1MD	LINE/L1	3614	3698	(2448)	1352924
272	23.9	9.2	1.8	chr15	76692029	76692139	(25299050)	+	L1MEd	LINE/L1	2385	2504	(3642)	1352922
878	32.3	7.0	5.3	chr15	76755575	76755971	(25235218)	+	MLT1F2	LTR/ERVL-MaLR	1	416	(144)	1353006
2104	6.3	5.3	0.4	chr15	78539699	78539969	(23451220)	C	AluSx	SINE/Alu	(17)	295	11	1356135
11	21.1	2.5	2.4	chr15	78540161	78540200	(23450989)	+	GA-rich	Low_complexity	1	41	(0)	1356136
192	27.0	0.0	1.6	chr15	78541476	78541539	(23449650)	+	L2c	LINE/L2	3023	3085	(302)	1356137
210	29.0	4.1	6.0	chr15	78541705	78541806	(23449383)	+	L2c	LINE/L2	3266	3391	(35)	1356137
251	28.1	10.1	0.0	chr15	78567718	78567806	(23423383)	+	MIR3	SINE/MIR	106	204	(4)	1356187
278	31.4	1.0	0.0	chr15	78567952	78568053	(23423136)	+	MIR3	SINE/MIR	68	170	(38)	1356188
426	24.6	11.0	3.6	chr15	78718011	78718426	(23272763)	C	L1ME3Cz	LINE/L1	(748)	5398	5192	1356474
13	11.2	3.2	3.1	chr15	78718430	78718460	(23272729)	+	(TTTC)n	Simple_repeat	1	32	(0)	1356476
42	2.4	0.0	0.0	chr15	78718464	78718506	(23272683)	+	(TTTCC)n	Simple_repeat	1	43	(0)	1356477
1427	10.0	4.5	0.0	chr15	79918724	79918982	(22072207)	C	HERVIP10FH-int	LTR/ERV1	(2819)	2283	2042	1358595
17	31.3	1.0	4.8	chr15	79919022	79919124	(22072065)	+	(CTTTCT)n	Simple_repeat	1	104	(0)	1358596
803	23.0	0.0	0.0	chr15	82796497	82796644	(19194545)	+	MLT1F1	LTR/ERVL-MaLR	422	569	(0)	1363470
759	27.2	3.2	11.1	chr15	82796777	82797082	(19194107)	+	Charlie2a	DNA/hAT-Charlie	38	318	(2543)	1363471
1996	15.4	0.6	1.0	chr15	82907073	82907384	(19083805)	+	AluSx3	SINE/Alu	1	311	(0)	1363651
61	17.0	1.8	6.3	chr15	82907386	82907556	(19083633)	+	GA-rich	Low_complexity	1	174	(0)	1363652
1445	15.1	3.2	2.2	chr15	82907558	82907854	(19083335)	+	L1MCa	LINE/L1	2737	3031	(3290)	1363645
357	24.1	12.9	4.3	chr15	84384063	84384522	(17606667)	C	L1ME4b	LINE/L1	(464)	5660	5189	1365921
98	15.8	4.7	3.7	chr15	84384524	84384780	(17606409)	+	(TTCT)n	Simple_repeat	1	269	(0)	1365922
16	14.2	0.0	0.0	chr15	84640932	84640962	(17350227)	+	(TTATCA)n	Simple_repeat	1	31	(0)	1366320
194	24.7	8.3	2.5	chr15	84641140	84641218	(17349971)	+	AmnSINE1	SINE/5S-Deu-L2	146	229	(346)	1366321
14	15.6	2.5	4.9	chr15	85048557	85048596	(16942593)	+	(TTC)n	Simple_repeat	1	41	(0)	1367181
751	21.8	6.0	1.9	chr15	85379504	85379709	(16611480)	C	L1ME3	LINE/L1	(29)	6133	5919	1367728
397	25.1	6.4	2.2	chr15	85379718	85379896	(16611293)	C	MER113B	DNA/hAT-Charlie	(72)	230	44	1367729
224	30.7	9.1	4.1	chr15	85494519	85494664	(16496525)	C	L2	LINE/L2	(995)	2424	2271	1367896
514	26.2	10.1	0.5	chr15	87478368	87478544	(14512645)	+	MIRb	SINE/MIR	9	194	(74)	1370862
329	34.9	7.2	2.1	chr15	87478545	87478781	(14512408)	+	MIRb	SINE/MIR	1	250	(18)	1370863
73	16.1	5.8	3.6	chr15	89539079	89539286	(12451903)	+	GA-rich	Low_complexity	1	220	(0)	1374417
48	0.0	0.0	0.0	chr15	89913850	89913890	(12077299)	+	(AC)n	Simple_repeat	1	41	(0)	1375135
680	16.9	1.2	4.6	chr15	89913895	89914026	(12077163)	C	ORSL	DNA/hAT-Tip100	(12)	263	137	1375136
30	17.3	4.6	0.0	chr15	90001395	90001459	(11989730)	+	GA-rich	Low_complexity	1	68	(0)	1375387
19	20.4	3.5	1.7	chr15	90001459	90001516	(11989673)	+	(GCGG)n	Simple_repeat	1	60	(0)	1375388
27	16.9	1.2	7.1	chr15	90001460	90001478	(11989711)	+	G-rich	Low_complexity	1	85	(0)	1375389
761	29.4	3.0	12.3	chr15	90531113	90531585	(11459604)	+	Charlie8	DNA/hAT-Charlie	1	428	(2000)	1376556
271	24.7	2.7	0.0	chr15	90531586	90531658	(11459531)	+	MER102c	DNA/hAT-Charlie	253	327	(4)	1376557
594	21.0	4.2	4.2	chr15	90663739	90663755	(11327434)	+	L2a	LINE/L2	3283	3298	(128)	1376812
2609	19.5	5.6	5.5	chr15	90773447	90774066	(11217123)	C	L1MB7	LINE/L1	(10)	6174	5565	1377071
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
456	31.5	5.6	4.5	chr15	90902168	90902294	(11088895)	+	L1ME4c	LINE/L1	410	530	(300)	1377331
183	24.9	2.5	0.8	chr15	91304213	91304692	(10686497)	+	GA-rich	Low_complexity	1	492	(0)	1378069
628	25.1	6.0	13.3	chr15	92931276	92931397	(9059792)	C	L1MC4	LINE/L1	(14)	8028	7917	1380767
40	8.1	1.5	1.5	chr15	96331535	96331601	(5659588)	+	(CTC)n	Simple_repeat	1	68	(0)	1385729
21	21.1	0.0	0.0	chr15	96331631	96331679	(5659510)	+	GA-rich	Low_complexity	1	49	(0)	1385730
19	15.5	1.4	9.7	chr15	96331743	96331813	(5659376)	+	(CTCCC)n	Simple_repeat	1	72	(0)	1385731
19	0.0	0.0	0.0	chr15	96340654	96340674	(5650515)	+	(T)n	Simple_repeat	1	21	(0)	1385740
29	25.4	0.0	4.1	chr15	96357557	96357653	(5633536)	+	(TTTCC)n	Simple_repeat	1	97	(0)	1385754
40	0.0	0.0	0.0	chr15	96357693	96357726	(5633463)	+	(TG)n	Simple_repeat	1	34	(0)	1385755
36	14.7	0.0	0.0	chr15	96357727	96357786	(5633403)	+	(AG)n	Simple_repeat	1	60	(0)	1385756
1985	13.4	1.0	1.6	chr15	98536688	98536993	(3454196)	+	AluJb	SINE/Alu	1	304	(8)	1388791
101	2.4	0.0	3.6	chr15	98536994	98537131	(3454058)	+	(GGAAG)n	Simple_repeat	1	138	(0)	1388792
32	19.6	0.0	0.0	chr15	98649490	98649549	(3341640)	+	(T)n	Simple_repeat	1	60	(0)	1389004
27	30.2	4.6	2.2	chr15	98688261	98688390	(3302799)	+	(TC)n	Simple_repeat	1	136	(0)	1389044
44	0.0	0.0	0.0	chr15	98688415	98688452	(3302737)	+	(TG)n	Simple_repeat	1	38	(0)	1389045
321	32.8	4.4	1.6	chr15	99254608	99254743	(2736446)	+	MIRb	SINE/MIR	2	149	(119)	1389852
378	31.3	2.7	11.0	chr15	99778640	99778872	(2212317)	+	MLT1L	LTR/ERVL-MaLR	115	332	(278)	1390605
1853	21.8	8.6	4.8	chr15	99778873	99779353	(2211836)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	1	1390606
115	16.2	4.9	3.5	chr15	99788222	99788525	(2202664)	+	(TTCC)n	Simple_repeat	1	319	(0)	1390622
257	31.3	16.4	5.0	chr15	101493104	101493365	(497824)	C	L1MEd	LINE/L1	(6446)	640	343	1392856
19	25.3	2.7	7.9	chr15	101493370	101493480	(497709)	+	(TCCC)n	Simple_repeat	1	114	(0)	1392857
2387	11.5	0.0	0.0	chr15	101493488	101493800	(497389)	C	AluSq2	SINE/Alu	(0)	313	1	1392858
2727	25.1	7.6	3.9	chr15	101547089	101548196	(442993)	+	L1MEg	LINE/L1	531	1781	(4461)	1392925
102	13.9	10.2	2.3	chr15	101784653	101784967	(206222)	+	A-rich	Low_complexity	1	347	(0)	1393260
178	20.1	0.5	3.6	chr16	778949	779367	(89558978)	+	(TCAC)n	Simple_repeat	1	421	(0)	1395205
2344	9.7	0.7	0.3	chr16	1292080	1292387	(89045958)	C	AluSz	SINE/Alu	(3)	309	1	1395693
160	7.1	1.8	7.9	chr16	1292391	1292725	(89045620)	+	(CTCTCCC)n	Simple_repeat	1	341	(0)	1395694
2009	14.1	1.3	1.3	chr16	2874553	2874864	(87463481)	+	AluSz	SINE/Alu	1	312	(0)	1398079
238	16.7	0.0	0.0	chr16	2982468	2982509	(87355836)	+	MIR	SINE/MIR	116	157	(105)	1398286
328	20.8	0.0	0.0	chr16	2982514	2982566	(87355779)	+	AluJo	SINE/Alu	250	302	(10)	1398288
41	12.7	1.0	7.7	chr16	2982567	2982669	(87355676)	+	A-rich	Low_complexity	1	104	(0)	1398289
671	17.3	11.7	2.2	chr16	2982676	2982764	(87355581)	+	AluJo	SINE/Alu	141	229	(83)	1398290
7770	6.9	2.4	0.5	chr16	3165443	3166429	(87171916)	C	LTR13	LTR/ERVK	(0)	1007	2	1398637
1822	14.0	5.0	2.1	chr16	3797379	3797706	(86540639)	C	MER44A	DNA/TcMar-Tigger	(1)	338	1	1399823
4381	19.1	4.1	2.2	chr16	3798053	3799343	(86539002)	+	L1MB7	LINE/L1	4867	6184	(0)	1399824
63	20.8	5.1	2.4	chr16	3839679	3839745	(86498600)	+	G-rich	Low_complexity	1	199	(24)	1399888
43	21.3	4.8	3.3	chr16	3839746	3839890	(86498455)	+	GA-rich	Low_complexity	1	152	(0)	1399889
334	30.7	7.2	0.0	chr16	8869582	8869709	(81468636)	C	MIRb	SINE/MIR	(61)	169	29	1410012
969	15.3	3.4	4.0	chr16	11465559	11465734	(78872611)	+	AluJo	SINE/Alu	75	249	(63)	1415741
324	27.0	12.5	0.0	chr16	11465944	11466104	(78872241)	+	L1M5	LINE/L1	5610	5812	(430)	1415742
23	10.0	0.0	0.0	chr16	14012214	14012246	(76326099)	+	(T)n	Simple_repeat	1	33	(0)	1421314
17	25.6	2.9	2.8	chr16	14133566	14133635	(76204710)	+	(TTCCCTT)n	Simple_repeat	1	72	(0)	1421564
2123	15.1	0.3	0.0	chr16	19102878	19103189	(71235156)	C	AluSp	SINE/Alu	(0)	313	1	1432704
755	26.0	11.4	1.9	chr16	19528071	19528548	(70809797)	+	L1ME4b	LINE/L1	88	615	(309)	1433777
13	18.9	0.0	0.0	chr16	19569469	19569498	(70768847)	+	(TCC)n	Simple_repeat	1	30	(0)	1433851
3284	11.0	8.0	0.4	chr16	20818771	20819299	(69519046)	C	L1PA11	LINE/L1	(3)	6171	5599	1436548
48	12.0	0.8	7.6	chr16	20819350	20819466	(69518879)	+	(TCTT)n	Simple_repeat	1	118	(0)	1436549
2495	7.7	0.3	0.0	chr16	20819474	20819771	(69518574)	+	AluSp	SINE/Alu	1	299	(14)	1436550
13	22.5	2.0	3.9	chr16	21278385	21278434	(69059911)	+	(CCCCG)n	Simple_repeat	1	51	(0)	1437565
17	9.4	2.8	2.7	chr16	21645635	21645670	(68692675)	+	(CACTTT)n	Simple_repeat	1	37	(0)	1438303
1838	13.3	1.3	6.2	chr16	22271407	22271728	(68066617)	+	AluJr	SINE/Alu	1	306	(6)	1439707
1732	21.7	12.6	2.8	chr16	22271729	22272127	(68066218)	C	MER63C	DNA/hAT-Blackjack	(104)	826	366	1439706
31	24.2	1.4	0.0	chr16	23143537	23143624	(67194721)	+	GA-rich	Low_complexity	1	89	(0)	1441504
884	19.9	3.2	0.0	chr16	23143700	23143880	(67194465)	C	MER20	DNA/hAT-Charlie	(4)	215	29	1441505
67	22.9	1.9	4.2	chr16	23348958	23349167	(66989178)	+	(TCTT)n	Simple_repeat	1	214	(0)	1442068
516	24.4	0.8	5.1	chr16	23505997	23506134	(66832211)	C	MIR	SINE/MIR	(0)	262	131	1442425
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
876	17.7	0.0	0.0	chr16	23596585	23596725	(66741620)	+	FLAM_C	SINE/Alu	1	141	(2)	1442648
591	22.6	0.0	4.6	chr16	23678377	23678529	(66659816)	C	MER5A1	DNA/hAT-Charlie	(2)	164	19	1442842
193	23.9	2.6	2.4	chr16	24113076	24113642	(66224703)	+	(TTTC)n	Simple_repeat	1	582	(0)	1443900
1801	18.9	0.6	1.3	chr16	24976245	24976556	(65361789)	+	AluJr	SINE/Alu	1	310	(2)	1445934
12	13.8	5.7	2.7	chr16	24976558	24976592	(65361753)	+	G-rich	Low_complexity	1	37	(0)	1445935
12	4.3	8.3	0.0	chr16	24976595	24976618	(65361727)	+	(AAAAG)n	Simple_repeat	1	26	(0)	1445936
18	23.0	4.0	3.9	chr16	24976619	24976630	(65361715)	+	A-rich	Low_complexity	7	77	(0)	1445937
504	29.9	6.8	4.8	chr16	24976638	24976953	(65361392)	+	MLT1K	LTR/ERVL-MaLR	273	595	(0)	1445938
535	25.7	9.0	3.7	chr16	28157949	28158243	(62180102)	+	L1ME5	LINE/L1	5721	6032	(162)	1452755
1889	17.4	10.3	2.1	chr16	28158244	28158671	(62179674)	+	Charlie1b	DNA/hAT-Charlie	55	521	(2)	1452756
344	30.2	12.8	3.7	chr16	28166800	28167174	(62171171)	+	L2c	LINE/L2	1964	2377	(1042)	1452771
307	28.1	3.6	3.6	chr16	28236643	28236782	(62101563)	+	MamGypLTR1c	LTR/Gypsy	62	201	(602)	1452951
13	12.7	0.0	0.0	chr16	28237896	28237921	(62100424)	+	(GGAAA)n	Simple_repeat	1	26	(0)	1452954
914	24.7	14.2	0.7	chr16	28237992	28238260	(62100085)	+	MLT1J	LTR/ERVL-MaLR	1	311	(201)	1452955
272	32.6	5.3	4.4	chr16	28327206	28327410	(62010935)	C	MamGypLTR3a	LTR/Gypsy	(427)	554	348	1453222
2332	10.7	0.0	0.0	chr16	29596005	29596313	(60742032)	+	AluSq2	SINE/Alu	1	309	(4)	1456056
44	24.3	1.0	0.0	chr16	29596316	29596419	(60741926)	+	G-rich	Low_complexity	1	105	(0)	1456057
2631	4.8	0.0	0.3	chr16	29596444	29596754	(60741591)	+	AluY	SINE/Alu	1	310	(1)	1456058
7576	6.4	0.5	1.6	chr16	29721076	29722093	(60616252)	C	LTR13	LTR/ERVK	(0)	1007	1	1456399
12	12.0	3.7	0.0	chr16	29810589	29810615	(60527730)	+	(TCCTC)n	Simple_repeat	1	28	(0)	1456614
15	14.4	0.0	0.0	chr16	29810653	29810676	(60527669)	+	(T)n	Simple_repeat	1	24	(0)	1456615
17	25.7	3.5	1.7	chr16	29819901	29819957	(60518388)	+	(GT)n	Simple_repeat	1	59	(0)	1456630
265	28.9	19.6	1.3	chr16	30421073	30421300	(59917045)	C	L2	LINE/L2	(1258)	2161	1882	1457989
1364	24.9	9.8	3.8	chr16	30799812	30800442	(59537903)	+	L1ME4b	LINE/L1	256	865	(27)	1458880
237	26.3	5.0	0.0	chr16	30845188	30845244	(59493101)	+	LTR41	LTR/ERVL	225	284	(484)	1459007
498	27.8	16.9	1.3	chr16	30876477	30876852	(59461493)	C	L2b	LINE/L2	(1)	3374	2916	1459069
413	30.4	8.1	1.5	chr16	31179120	31179316	(59159029)	+	MIRb	SINE/MIR	25	235	(33)	1459793
908	31.1	8.0	4.2	chr16	31269590	31270022	(59068323)	C	LTR33	LTR/ERVL	(43)	472	16	1460009
64	1.2	4.7	2.2	chr16	31270107	31270191	(59068154)	+	(TTCCT)n	Simple_repeat	1	89	(0)	1460011
315	17.5	6.0	0.0	chr16	31270197	31270259	(59068086)	C	Alu	SINE/Alu	(1)	300	234	1460012
1036	11.3	0.0	0.0	chr16	31270260	31270400	(59067945)	C	AluSz	SINE/Alu	(170)	142	2	1460013
1998	13.4	0.7	0.0	chr16	31452061	31452343	(58886002)	C	AluJo	SINE/Alu	(19)	293	9	1460348
144	26.2	3.1	2.2	chr16	46426406	46426883	(43911462)	+	(CTTC)n	Simple_repeat	1	493	(0)	1465469
1574	25.1	11.7	3.3	chr16	46803670	46804597	(43533748)	C	HAL1	LINE/L1	(10)	2497	1487	1466068
298	23.0	13.1	0.7	chr16	46817087	46817226	(43521119)	+	HAL1ME	LINE/L1	1275	1434	(1031)	1466084
241	30.7	7.4	2.4	chr16	47156823	47156989	(43181356)	C	L2	LINE/L2	(503)	2916	2741	1466798
503	27.1	9.8	5.9	chr16	50219313	50219634	(40118711)	C	L1ME4b	LINE/L1	(228)	664	329	1472079
32	20.4	9.2	4.2	chr16	50219646	50219656	(40118689)	+	(TTCTC)n	Simple_repeat	1	33	(157)	1472080
27	29.1	6.0	0.0	chr16	50219657	50219772	(40118573)	+	(TCTCTC)n	Simple_repeat	1	123	(0)	1472081
32	20.4	9.2	4.2	chr16	50219773	50219819	(40118526)	+	(TTCTC)n	Simple_repeat	34	190	(0)	1472080
1510	14.3	3.0	17.1	chr16	50219820	50219982	(40118363)	C	AluJr	SINE/Alu	(8)	304	134	1472082
64	30.0	2.6	2.9	chr16	50369211	50369478	(39968867)	+	(TCCT)n	Simple_repeat	1	275	(0)	1472325
24	23.2	7.4	2.3	chr16	54286378	54286498	(36051847)	+	(CGCTCCT)n	Simple_repeat	1	130	(0)	1479233
14	12.2	8.1	0.0	chr16	54286558	54286594	(36051751)	+	(CTCTCCT)n	Simple_repeat	1	40	(0)	1479234
326	29.3	8.4	4.1	chr16	56451994	56452164	(33886181)	+	MIRb	SINE/MIR	3	181	(87)	1483064
398	21.2	2.4	1.2	chr16	56452609	56452689	(33885656)	+	MIR	SINE/MIR	111	192	(70)	1483065
1494	18.1	7.3	0.7	chr16	56566254	56566523	(33771822)	+	AluJo	SINE/Alu	13	301	(11)	1483304
209	14.4	1.3	1.6	chr16	56566526	56566906	(33771439)	+	A-rich	Low_complexity	1	386	(0)	1483305
502	20.3	13.7	5.4	chr16	56609871	56610110	(33728235)	C	Charlie10	DNA/hAT-Charlie	(4)	2818	2556	1483408
15	23.4	0.0	0.0	chr16	56771933	56771972	(33566373)	+	(TTTTTG)n	Simple_repeat	1	40	(0)	1483713
21	24.4	2.2	5.3	chr16	56771987	56772078	(33566267)	+	(CTTTT)n	Simple_repeat	1	94	(0)	1483714
16	10.9	4.7	4.4	chr16	57168043	57168085	(33170260)	+	(TCCC)n	Simple_repeat	1	45	(0)	1484497
184	19.1	15.0	1.4	chr16	57187618	57187686	(33150659)	+	MIRc	SINE/MIR	179	258	(10)	1484534
12	13.3	2.7	5.3	chr16	57314525	57314561	(33023784)	+	(TTACTT)n	Simple_repeat	1	38	(0)	1484805
111	20.5	2.9	1.8	chr16	57387859	57388132	(32950213)	+	GA-rich	Low_complexity	1	282	(0)	1484984
284	24.4	4.2	0.3	chr16	57388134	57388230	(32950115)	C	MIR	SINE/MIR	(130)	138	32	1484982
78	12.3	4.3	0.0	chr16	57475661	57475798	(32862547)	+	(TC)n	Simple_repeat	1	144	(0)	1485138
133	13.0	2.3	2.9	chr16	57628843	57629108	(32709237)	+	(AGTGTG)n	Simple_repeat	1	272	(0)	1485455
27	8.8	0.0	0.0	chr16	57882776	57882812	(32455533)	+	(T)n	Simple_repeat	1	37	(0)	1485973
90	18.0	2.3	3.1	chr16	61418709	61418926	(28919419)	+	(TTTC)n	Simple_repeat	1	223	(0)	1491797
321	31.5	10.0	5.2	chr16	61418927	61419288	(28919057)	C	HAL1	LINE/L1	(1230)	1277	897	1491798
84	14.3	1.9	1.8	chr16	63178982	63179141	(27159204)	+	GA-rich	Low_complexity	1	163	(0)	1494488
264	28.7	8.5	0.9	chr16	65088796	65088904	(25249441)	C	L1M5	LINE/L1	(501)	5623	5506	1497394
2187	19.5	0.0	1.1	chr16	66382991	66383426	(23954919)	+	L1MC3	LINE/L1	7345	7775	(10)	1499627
72	9.7	5.7	3.6	chr16	66474651	66474795	(23863550)	+	GA-rich	Low_complexity	14	161	(0)	1499812
228	32.2	10.1	2.7	chr16	66474842	66474988	(23863357)	+	MIRb	SINE/MIR	68	226	(42)	1499813
2609	12.0	7.1	3.1	chr16	66590346	66590737	(23747608)	C	MER4C	LTR/ERV1	(52)	413	1	1500008
2057	14.1	0.0	0.7	chr16	66693739	66694042	(23644303)	+	AluSx3	SINE/Alu	1	302	(9)	1500222
27	21.4	5.6	0.0	chr16	66694043	66694114	(23644231)	+	GA-rich	Low_complexity	1	76	(0)	1500223
20	5.2	7.1	2.2	chr16	66694079	66694138	(23644207)	+	(AGAAA)n	Simple_repeat	1	62	(0)	1500224
73	22.8	3.1	4.9	chr16	66790208	66790466	(23547879)	+	G-rich	Low_complexity	1	267	(0)	1500421
16	10.8	5.1	8.1	chr16	66899626	66899684	(23438661)	+	(CCTGGC)n	Simple_repeat	1	62	(0)	1500653
281	32.8	3.0	0.0	chr16	66899830	66899960	(23438385)	+	L1M5	LINE/L1	5669	5803	(320)	1500654
233	40.5	3.2	0.5	chr16	67327749	67327959	(23010386)	C	L2-3_Crp	LINE/L2	(1136)	960	744	1501444
229	30.3	10.8	2.4	chr16	67327982	67328150	(23010195)	C	L2	LINE/L2	(1495)	1924	1740	1501443
2214	7.2	0.0	1.8	chr16	67412785	67413063	(22925282)	C	AluSq	SINE/Alu	(0)	313	40	1501587
12	23.4	0.0	4.5	chr16	67547085	67547128	(22791217)	+	G-rich	Low_complexity	1	44	(0)	1501849
258	27.6	12.5	0.0	chr16	68521099	68521196	(21817149)	C	MIR3	SINE/MIR	(44)	164	53	1503688
25	17.5	9.0	2.8	chr16	69274970	69275069	(21063276)	+	(TCTTTCC)n	Simple_repeat	1	109	(0)	1505467
1707	19.7	2.7	1.4	chr16	69275073	69275361	(21062984)	C	AluJr4	SINE/Alu	(14)	298	6	1505468
13	11.7	3.6	0.0	chr16	69304114	69304141	(21034204)	+	A-rich	Low_complexity	1	29	(0)	1505532
12	16.8	0.0	5.4	chr16	69607743	69607779	(20730566)	+	(TTTCTT)n	Simple_repeat	1	37	(0)	1506195
1583	10.5	11.7	10.8	chr16	70383269	70383573	(19954772)	+	AluSx	SINE/Alu	1	308	(4)	1507867
36	9.4	1.2	7.3	chr16	70383578	70383676	(19954669)	+	A-rich	Low_complexity	1	92	(0)	1507868
295	21.6	11.0	2.0	chr16	70522740	70522838	(19815507)	C	MIR3	SINE/MIR	(13)	195	87	1508194
90	12.5	1.9	6.5	chr16	71754186	71754398	(18583947)	+	A-rich	Low_complexity	1	217	(0)	1510294
1859	17.1	0.3	2.0	chr16	71754524	71754822	(18583523)	+	AluJr	SINE/Alu	10	303	(9)	1510295
11	15.1	11.4	0.0	chr16	72786061	72786104	(17552241)	+	A-rich	Low_complexity	1	49	(0)	1511988
20	11.6	0.0	0.0	chr16	73172932	73172960	(17165385)	+	(T)n	Simple_repeat	1	29	(0)	1512569
31	5.5	0.0	0.0	chr16	73172989	73173026	(17165319)	+	(T)n	Simple_repeat	1	38	(0)	1512569
15719	14.4	3.1	4.0	chr16	75433679	75434907	(14903438)	+	Tigger17	DNA/TcMar-Tigger	1	1199	(1474)	1516787
626	32.2	10.4	7.5	chr16	75624937	75625320	(14713025)	+	L2	LINE/L2	2488	2854	(565)	1517187
28	27.3	4.9	2.3	chr16	78811412	78811424	(11526921)	+	(CTTT)n	Simple_repeat	1	53	(75)	1522448
33	12.3	3.2	7.2	chr16	78811425	78811518	(11526827)	+	(CCTTT)n	Simple_repeat	1	97	(0)	1522449
28	27.3	4.9	2.3	chr16	78811519	78811533	(11526812)	+	(CTTT)n	Simple_repeat	54	128	(0)	1522448
1053	10.5	0.0	0.0	chr16	78811538	78811670	(11526675)	C	AluSx	SINE/Alu	(179)	133	1	1522450
114	3.1	5.2	1.6	chr16	80672469	80672641	(9665704)	+	(AGGAA)n	Simple_repeat	1	182	(0)	1525688
516	30.1	2.0	3.9	chr16	80672646	80672852	(9665493)	+	MIR	SINE/MIR	57	259	(3)	1525689
781	16.1	7.4	0.6	chr16	81803339	81803501	(8534844)	C	L1MB7	LINE/L1	(294)	5890	5716	1528077
357	28.9	6.6	0.8	chr16	81803505	81803633	(8534712)	C	L1MEd	LINE/L1	(5009)	2077	1941	1528079
35	0.0	0.0	0.0	chr16	81803634	81803666	(8534679)	+	(TCCC)n	Simple_repeat	1	33	(0)	1528080
42	33.7	1.5	3.9	chr16	83838266	83838465	(6499880)	+	GA-rich	Low_complexity	1	203	(0)	1531694
1271	27.2	9.7	2.9	chr16	84106326	84107047	(6231298)	C	L2a	LINE/L2	(210)	3216	2433	1532157
13	15.9	0.0	0.0	chr16	84622882	84622909	(5715436)	+	(ATTC)n	Simple_repeat	1	28	(0)	1533223
357	27.1	8.8	12.1	chr16	84622940	84623221	(5715124)	C	MER102c	DNA/hAT-Charlie	(2)	329	85	1533224
37	25.2	3.5	0.8	chr16	84637802	84637914	(5700431)	+	(CTTTC)n	Simple_repeat	1	117	(0)	1533264
1873	16.2	2.7	0.0	chr16	84637915	84638204	(5700141)	C	AluJb	SINE/Alu	(14)	298	1	1533265
11	18.3	5.0	2.4	chr16	85029617	85029656	(5308689)	+	(TCTCTCC)n	Simple_repeat	1	42	(0)	1534049
47	29.4	3.5	5.4	chr16	85137839	85137853	(5200492)	+	(CCTTT)n	Simple_repeat	1	144	(154)	1534261
54	31.4	2.3	3.8	chr16	85137854	85138113	(5200232)	+	(CTTT)n	Simple_repeat	1	266	(0)	1534262
270	24.9	0.6	2.0	chr16	86877393	86878118	(3460227)	+	(CT)n	Simple_repeat	1	730	(0)	1537403
229	25.7	1.7	0.0	chr16	87178412	87178987	(3159358)	+	(CT)n	Simple_repeat	1	586	(0)	1537955
9943	15.6	7.2	5.7	chr16	89375792	89376437	(961908)	+	Tigger2	DNA/TcMar-Tigger	539	1160	(1558)	1541163
6393	10.2	3.8	1.1	chr16	89640740	89641667	(696678)	C	LTR13_	LTR/ERVK	(0)	954	1	1541593
302	23.0	18.0	0.0	chr16	90022365	90022464	(315881)	C	L2a	LINE/L2	(2)	3424	3303	1542246
2230	12.5	0.3	0.0	chr17	2561940	2562251	(80695190)	+	AluSp	SINE/Alu	1	313	(0)	1549439
66	27.9	1.9	2.7	chr17	2562252	2562467	(80694974)	+	A-rich	Low_complexity	1	220	(0)	1549440
930	30.8	5.0	6.5	chr17	2892341	2892848	(80364593)	C	MLT1G	LTR/ERVL-MaLR	(51)	540	39	1550196
376	25.2	11.2	0.1	chr17	4259127	4259277	(78998164)	C	MIR	SINE/MIR	(80)	188	12	1552633
814	17.2	3.0	0.0	chr17	4265437	4265564	(78991877)	C	FLAM_C	SINE/Alu	(11)	132	1	1552646
892	18.5	0.6	4.3	chr17	4265703	4265886	(78991555)	+	AluJo	SINE/Alu	132	308	(4)	1552647
949	16.7	6.0	0.0	chr17	4792269	4792424	(78465017)	+	AluSg4	SINE/Alu	135	300	(10)	1553795
2506	16.0	1.7	5.4	chr17	4792444	4792782	(78464659)	+	L1M4	LINE/L1	3951	4277	(1869)	1553796
14	12.8	2.6	5.1	chr17	4949608	4949645	(78307796)	+	G-rich	Low_complexity	1	39	(0)	1554114
73	21.1	1.7	1.1	chr17	5229817	5229989	(78027452)	+	(TCCTC)n	Simple_repeat	1	176	(0)	1554678
684	16.2	1.0	0.0	chr17	5230028	5230126	(78027315)	C	AluJr	SINE/Alu	(212)	100	1	1554679
2520	7.6	0.0	0.0	chr17	5461937	5462239	(77795202)	C	AluSx	SINE/Alu	(9)	303	1	1555191
596	28.6	4.5	2.1	chr17	6648387	6648655	(76608786)	C	MER102b	DNA/hAT-Charlie	(48)	282	2	1557461
1856	17.2	0.7	0.7	chr17	6910751	6911053	(76346388)	C	AluJr	SINE/Alu	(8)	304	2	1557888
4478	17.8	6.4	3.5	chr17	6911054	6911966	(76345475)	+	L1M1	LINE/L1	2851	3813	(3749)	1557886
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
662	31.6	9.3	5.9	chr17	7485856	7486311	(75771130)	C	L2a	LINE/L2	(237)	3189	2688	1558913
566	26.4	11.2	9.1	chr17	7486435	7487018	(75770423)	+	L1ME4b	LINE/L1	2	333	(559)	1558916
12	10.4	6.1	2.9	chr17	7842563	7842595	(75414846)	+	(AGAGTG)n	Simple_repeat	1	35	(0)	1559627
16	24.0	3.9	1.9	chr17	7842709	7842759	(75414682)	+	(GT)n	Simple_repeat	1	53	(0)	1559628
2161	29.6	4.6	5.0	chr17	8062292	8063901	(75193540)	+	HERVK-int	LTR/ERVK	4678	6588	(948)	1560027
3368	26.6	10.9	4.8	chr17	8138308	8138688	(75118753)	C	L2a	LINE/L2	(1677)	1742	1320	1560160
691	0.0	0.0	0.0	chr17	8139452	8139525	(75117916)	C	tRNA-Thr-ACY	tRNA	(3)	74	1	1560172
2357	10.3	0.3	0.0	chr17	8210788	8211098	(75046343)	C	AluSx1	SINE/Alu	(0)	312	1	1560324
2115	12.4	0.0	0.0	chr17	8984108	8984389	(74273052)	+	AluSq2	SINE/Alu	1	282	(31)	1561831
93	0.0	0.0	2.2	chr17	8984392	8984482	(74272959)	+	(AAGGA)n	Simple_repeat	1	91	(0)	1561832
23	17.1	3.8	0.0	chr17	8984485	8984537	(74272904)	+	GA-rich	Low_complexity	1	55	(0)	1561833
446	22.8	14.4	4.1	chr17	8984538	8984853	(74272588)	+	L1M5	LINE/L1	4241	4594	(1552)	1561824
210	17.8	8.2	0.0	chr17	9007003	9007047	(74250394)	+	L2b	LINE/L2	3311	3359	(16)	1561883
535	31.8	5.5	3.8	chr17	9007060	9007575	(74249866)	C	L1MC4	LINE/L1	(4937)	1278	957	1561884
874	26.1	7.9	6.9	chr17	9289813	9290276	(73967165)	+	HAL1	LINE/L1	2028	2496	(11)	1562384
22	14.6	8.3	2.6	chr17	9364991	9365062	(73892379)	+	GA-rich	Low_complexity	1	78	(0)	1562558
698	22.4	14.8	5.9	chr17	9365139	9365394	(73892047)	+	MER102b	DNA/hAT-Charlie	45	327	(14)	1562559
36	10.2	11.1	0.9	chr17	9648825	9648903	(73608538)	+	(TCTTTC)n	Simple_repeat	1	87	(0)	1563119
39	9.6	0.0	0.0	chr17	9648904	9648959	(73608482)	+	(TC)n	Simple_repeat	1	56	(0)	1563120
1267	12.0	1.3	13.2	chr17	9667164	9667421	(73590020)	+	AluJb	SINE/Alu	86	312	(0)	1563166
223	32.6	13.2	1.4	chr17	9667588	9667733	(73589708)	C	L2b	LINE/L2	(226)	3149	2984	1563167
1743	17.1	0.0	1.1	chr17	10075817	10076079	(73181362)	+	AluSz	SINE/Alu	1	260	(52)	1563979
123	21.1	5.0	2.3	chr17	10076080	10076458	(73180983)	+	G-rich	Low_complexity	1	398	(0)	1563980
104	28.7	4.0	1.0	chr17	10755604	10755974	(72501467)	+	(CTCTCC)n	Simple_repeat	1	386	(0)	1565209
30	41.6	3.3	3.9	chr17	13025634	13026031	(70231410)	+	(TCCCCCT)n	Simple_repeat	1	411	(0)	1569065
152	26.8	2.9	1.1	chr17	13199480	13199932	(70057509)	+	(TTTC)n	Simple_repeat	1	466	(0)	1569385
12177	11.5	7.1	0.6	chr17	16035842	16037445	(67219996)	C	Tigger1	DNA/TcMar-Tigger	(693)	1725	1	1574102
587	20.6	0.0	0.0	chr17	16320005	16320106	(66937335)	+	FLAM_A	SINE/Alu	1	102	(40)	1574689
227	27.0	8.7	6.4	chr17	16320107	16320188	(66937253)	C	SVA_E	Retroposon/SVA	(1175)	172	1	1574688
170	13.4	2.4	4.5	chr17	16320203	16320572	(66936869)	+	GA-rich	Low_complexity	1	379	(0)	1574690
823	26.9	8.3	9.2	chr17	17751598	17752056	(65505385)	+	L2a	LINE/L2	2972	3426	(0)	1577283
21	31.9	1.5	0.0	chr17	17783970	17784035	(65473406)	+	(CT)n	Simple_repeat	1	67	(0)	1577348
260	32.3	6.7	3.1	chr17	17943580	17943838	(65313603)	+	L2c	LINE/L2	2694	2962	(457)	1577626
283	24.5	11.7	9.0	chr17	18855953	18856118	(64401323)	C	MLT1K	LTR/ERVL-MaLR	(24)	571	401	1579268
253	25.6	10.6	7.0	chr17	18856137	18856308	(64401133)	C	MLT1K	LTR/ERVL-MaLR	(266)	329	151	1579268
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
554	24.8	5.8	0.0	chr17	19453624	19453784	(63803657)	+	LSU-rRNA_Hsa	rRNA	4195	4365	(670)	1580626
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
35	34.1	2.8	4.7	chr17	21042336	21042586	(62214855)	+	G-rich	Low_complexity	1	258	(0)	1583514
15	30.1	5.8	2.8	chr17	21042490	21042592	(62214849)	+	GA-rich	Low_complexity	1	109	(0)	1583515
13	26.4	2.3	0.0	chr17	27489479	27489521	(55767920)	+	(TTTCCCT)n	Simple_repeat	1	44	(0)	1586895
455	36.3	8.2	0.7	chr17	27562958	27563237	(55694204)	+	L2a	LINE/L2	2537	2839	(580)	1587046
25	8.7	3.8	3.6	chr17	27563238	27563291	(55694150)	+	(TTTTCC)n	Simple_repeat	1	54	(0)	1587047
1492	17.8	3.4	0.8	chr17	27563297	27563555	(55693886)	C	AluJr	SINE/Alu	(45)	267	2	1587048
1723	13.8	6.6	3.1	chr17	27802820	27803110	(55454331)	+	AluJr	SINE/Alu	1	302	(10)	1587441
88	1.2	0.0	0.0	chr17	27803121	27803202	(55454239)	+	(AGGAA)n	Simple_repeat	1	82	(0)	1587442
1080	24.3	9.8	10.7	chr17	27803203	27803553	(55453888)	C	MER34A1	LTR/ERV1	(242)	345	1	1587440
851	13.6	0.0	0.0	chr17	28663829	28663953	(54593488)	C	AluJo	SINE/Alu	(10)	302	178	1589102
13	33.8	2.4	2.4	chr17	28727120	28727201	(54530240)	+	G-rich	Low_complexity	1	84	(0)	1589204
15	13.9	0.0	0.0	chr17	29292400	29292423	(53965018)	+	(T)n	Simple_repeat	1	24	(0)	1590284
214	37.8	0.8	0.8	chr17	29715896	29716023	(53541418)	+	L2	LINE/L2	1395	1522	(1897)	1591196
760	17.1	8.1	0.6	chr17	31659425	31659583	(51597858)	C	MLT1A	LTR/ERVL-MaLR	(218)	172	1	1595037
26	21.3	1.3	5.1	chr17	32280803	32280880	(50976561)	+	(CT)n	Simple_repeat	1	79	(0)	1596455
123	2.1	8.3	1.8	chr17	34507970	34508173	(48749268)	+	(GGAAA)n	Simple_repeat	1	221	(0)	1600530
256	26.0	17.0	1.6	chr17	34508205	34508333	(48749108)	C	MIRb	SINE/MIR	(62)	206	54	1600531
332	26.6	5.0	7.4	chr17	34981367	34981488	(48275953)	C	Charlie4z	DNA/hAT-Charlie	(2)	165	47	1601462
186	29.7	8.6	4.5	chr17	35568569	35568635	(47688806)	C	L2a	LINE/L2	(2)	3424	3355	1602412
2446	6.8	0.0	0.3	chr17	35568835	35569141	(47688300)	C	AluSg7	SINE/Alu	(3)	306	1	1602413
59	9.7	2.0	1.0	chr17	38886082	38886183	(44371258)	+	(CT)n	Simple_repeat	1	104	(0)	1608810
263	25.1	5.2	0.0	chr17	38983389	38983478	(44273963)	C	MIR3	SINE/MIR	(23)	185	94	1609045
2228	11.8	0.7	0.0	chr17	38983509	38983812	(44273629)	+	AluSq2	SINE/Alu	1	306	(7)	1609046
484	25.4	12.4	2.1	chr17	39365998	39366158	(43891283)	C	FRAM	SINE/Alu	(6)	295	1	1609909
1916	17.7	1.0	0.0	chr17	39810958	39811251	(43446190)	+	AluJb	SINE/Alu	1	297	(15)	1610812
101	18.9	0.9	3.0	chr17	39811258	39811487	(43445954)	+	A-rich	Low_complexity	1	232	(0)	1610813
2419	10.0	0.0	0.0	chr17	40038431	40038739	(43218702)	+	AluSc	SINE/Alu	1	309	(0)	1611226
278	32.4	3.6	0.9	chr17	40113907	40114015	(43143426)	C	MIR3	SINE/MIR	(1)	207	96	1611369
181	14.7	0.0	2.9	chr17	40124253	40124287	(43133154)	+	X9_LINE	LINE/L1	36	69	(867)	1611396
51	19.4	2.6	0.8	chr17	40124316	40124432	(43133009)	+	(TCTC)n	Simple_repeat	1	120	(0)	1611397
2453	9.2	0.0	0.6	chr17	40358086	40358399	(42899042)	+	AluSx1	SINE/Alu	1	312	(0)	1611874
44	21.2	3.6	3.5	chr17	40358400	40358550	(42898891)	+	A-rich	Low_complexity	1	151	(0)	1611875
221	39.2	7.2	2.1	chr17	40827957	40828193	(42429248)	+	L2b	LINE/L2	2563	2812	(607)	1612718
1477	20.1	5.0	3.7	chr17	41765974	41766271	(41491170)	+	AluJr	SINE/Alu	1	302	(10)	1614252
15	26.6	1.8	1.8	chr17	41766277	41766307	(41491134)	+	GA-rich	Low_complexity	1	30	(0)	1614253
30	0.0	0.0	3.0	chr17	41766308	41766340	(41491101)	+	(AAAGGA)n	Simple_repeat	1	33	(0)	1614254
15	26.6	1.8	1.8	chr17	41766341	41766364	(41491077)	+	GA-rich	Low_complexity	31	55	(0)	1614255
2093	12.2	0.0	6.0	chr17	41766439	41766576	(41490865)	+	AluJb	SINE/Alu	1	126	(186)	1614256
477	7.7	16.1	0.0	chr17	41894582	41894659	(41362782)	+	L1MA2	LINE/L1	6208	6300	(4)	1614530
121	14.7	0.6	8.1	chr17	41904115	41904420	(41353021)	+	GA-rich	Low_complexity	14	296	(0)	1614546
1170	18.4	0.0	0.5	chr17	42105994	42106183	(41151258)	+	AluJo	SINE/Alu	119	307	(5)	1614958
49	31.5	1.9	0.0	chr17	42106187	42106340	(41151101)	+	GA-rich	Low_complexity	1	157	(0)	1614959
232	20.0	0.0	0.0	chr17	42133488	42133532	(41123909)	C	MER5B	DNA/hAT-Charlie	(0)	178	134	1614996
280	28.4	10.1	0.8	chr17	42133636	42133752	(41123689)	+	MIRb	SINE/MIR	24	152	(116)	1614997
404	34.0	4.9	1.5	chr17	42358644	42358840	(40898601)	+	MIRb	SINE/MIR	9	212	(56)	1615447
2394	9.3	0.0	0.7	chr17	42358926	42359235	(40898206)	C	AluY	SINE/Alu	(3)	308	1	1615448
2496	8.1	0.0	0.0	chr17	42540416	42540722	(40716719)	+	AluY	SINE/Alu	2	308	(3)	1615853
196	28.2	6.0	0.0	chr17	42540778	42540855	(40716586)	C	L2c	LINE/L2	(283)	3104	3022	1615854
361	27.9	3.4	15.1	chr17	42549213	42549326	(40708115)	+	MIRb	SINE/MIR	42	125	(143)	1615871
2028	11.5	8.0	0.0	chr17	42549327	42549614	(40707827)	C	AluSp	SINE/Alu	(0)	313	1	1615872
1264	13.1	1.1	0.0	chr17	43074773	43074947	(40182494)	+	AluSx1	SINE/Alu	135	311	(1)	1617019
72	4.0	13.8	1.1	chr17	43074950	43075108	(40182333)	+	A-rich	Low_complexity	1	181	(0)	1617020
2256	9.6	0.3	0.7	chr17	43168356	43168658	(40088783)	+	AluSp	SINE/Alu	1	302	(11)	1617231
12	10.9	0.0	8.6	chr17	43168888	43168922	(40088519)	+	A-rich	Low_complexity	1	35	(0)	1617232
1815	17.8	10.9	2.5	chr17	43453388	43453884	(39803557)	+	LTR18B	LTR/ERVL	1	587	(27)	1617869
16	0.0	0.0	0.0	chr17	44222819	44222836	(39034605)	+	(T)n	Simple_repeat	1	18	(0)	1619469
1082	22.3	3.4	13.8	chr17	47001489	47001710	(36255731)	C	L1ME1	LINE/L1	(11)	6168	5972	1625149
2147	10.7	0.3	5.2	chr17	47001711	47002038	(36255403)	C	AluSx1	SINE/Alu	(0)	312	1	1625150
42	20.9	2.0	6.7	chr17	47719171	47719329	(35538112)	+	GA-rich	Low_complexity	1	151	(0)	1626600
2020	15.0	0.3	1.0	chr17	48044952	48045258	(35212183)	C	AluJb	SINE/Alu	(7)	305	1	1627183
2380	8.5	0.0	0.0	chr17	48050197	48050491	(35206950)	+	AluSx1	SINE/Alu	1	295	(17)	1627191
672	14.3	3.2	0.8	chr17	48112304	48112423	(35145018)	+	L2a	LINE/L2	3302	3424	(2)	1627318
14	18.7	6.9	3.2	chr17	48112425	48112482	(35144959)	+	(TGAA)n	Simple_repeat	1	62	(0)	1627319
12	17.5	0.0	5.6	chr17	48555184	48555219	(34702222)	+	GA-rich	Low_complexity	1	36	(0)	1628090
65	12.5	4.7	0.8	chr17	48555273	48555400	(34702041)	+	GA-rich	Low_complexity	1	134	(0)	1628090
185	30.0	7.0	5.9	chr17	48574591	48574675	(34682766)	+	MER5B	DNA/hAT-Charlie	42	127	(51)	1628109
25	7.9	2.5	0.0	chr17	48577529	48577568	(34679873)	+	(CCT)n	Simple_repeat	1	41	(0)	1628112
30	18.1	5.2	1.2	chr17	48604820	48604896	(34652545)	+	(TC)n	Simple_repeat	1	81	(0)	1628133
38	23.7	4.2	3.4	chr17	48612615	48612756	(34644685)	+	GA-rich	Low_complexity	1	148	(0)	1628143
57	29.1	1.7	0.0	chr17	48615214	48615385	(34642056)	+	GA-rich	Low_complexity	1	175	(0)	1628150
12	25.3	3.8	1.8	chr17	48633058	48633110	(34624331)	+	GA-rich	Low_complexity	1	55	(0)	1628161
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
20	3.5	3.3	0.0	chr17	49003778	49003807	(34253634)	+	(GGGA)n	Simple_repeat	1	31	(0)	1629013
17	4.5	0.0	4.0	chr17	49003973	49003997	(34253444)	+	(AG)n	Simple_repeat	1	25	(0)	1629014
12	28.2	1.7	3.3	chr17	49004032	49004090	(34253351)	+	(CGCCC)n	Simple_repeat	1	60	(0)	1629015
152	24.6	5.0	0.2	chr17	49165249	49165704	(34091737)	+	(TC)n	Simple_repeat	1	479	(0)	1629350
2256	11.6	0.0	0.0	chr17	49379242	49379544	(33877897)	+	AluSx	SINE/Alu	2	304	(8)	1629832
473	25.1	7.0	11.8	chr17	49896028	49896239	(33361202)	C	MIRb	SINE/MIR	(15)	253	53	1630784
16	24.6	3.7	0.0	chr17	49979461	49979514	(33277927)	+	(TCTCTT)n	Simple_repeat	1	56	(0)	1630920
2263	12.1	0.3	0.6	chr17	50206374	50206687	(33050754)	+	AluSq2	SINE/Alu	1	313	(0)	1631312
18	29.0	0.0	1.6	chr17	50206871	50206932	(33050509)	+	(TTTTC)n	Simple_repeat	1	62	(0)	1631313
991	33.9	11.3	2.3	chr17	50681088	50681818	(32575623)	+	L2a	LINE/L2	1282	2105	(1314)	1632236
24	10.8	0.0	0.0	chr17	50735448	50735487	(32521954)	+	(TTTTCC)n	Simple_repeat	1	40	(0)	1632346
1919	16.3	2.6	1.3	chr17	50735491	50735797	(32521644)	C	AluJb	SINE/Alu	(1)	311	1	1632347
44	19.4	6.0	1.4	chr17	50745770	50745903	(32511538)	+	A-rich	Low_complexity	1	142	(0)	1632365
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
1359	19.4	0.7	2.9	chr17	51124917	51125194	(32132247)	+	AluJr	SINE/Alu	29	300	(12)	1633172
33	32.1	0.0	0.0	chr17	51125212	51125308	(32132133)	+	A-rich	Low_complexity	1	97	(0)	1633173
2267	12.5	0.0	0.0	chr17	51125321	51125624	(32131817)	C	AluSq10	SINE/Alu	(8)	305	2	1633174
503	29.1	3.3	1.1	chr17	57892848	57893024	(25364417)	C	MER117	DNA/hAT-Charlie	(10)	187	7	1644055
519	29.3	6.3	1.4	chr17	57990824	57991027	(25266414)	+	MIRb	SINE/MIR	44	259	(3)	1644236
197	35.6	2.8	7.1	chr17	57993997	57994108	(25263333)	C	L2c	LINE/L2	(15)	3372	3266	1644239
1197	23.9	3.2	9.5	chr17	58595397	58595875	(24661566)	+	MLT1H2	LTR/ERVL-MaLR	32	482	(7)	1645281
300	23.6	12.9	12.1	chr17	58679172	58679272	(24578169)	+	MLT1D	LTR/ERVL-MaLR	199	292	(213)	1645507
14	24.1	0.0	0.0	chr17	58756637	58756675	(24500766)	+	(CCCGCC)n	Simple_repeat	1	39	(0)	1645701
2283	7.7	1.4	0.0	chr17	59153783	59154069	(24103372)	C	AluSc	SINE/Alu	(18)	291	1	1646560
199	29.3	11.5	7.7	chr17	59284993	59285225	(23972216)	C	MIRc	SINE/MIR	(15)	253	11	1646896
420	15.6	0.0	0.0	chr17	60097659	60097722	(23159719)	+	L1MA9	LINE/L1	4816	4879	(1261)	1648569
297	9.4	3.6	0.0	chr17	60097723	60097775	(23159666)	+	MER41B	LTR/ERV1	498	552	(82)	1648570
4448	15.0	4.1	2.5	chr17	60097783	60099064	(23158377)	+	L1MA9	LINE/L1	4867	6290	(22)	1648569
1765	12.7	0.7	0.7	chr17	60640532	60640808	(22616633)	C	L1PA16	LINE/L1	(2)	6164	5888	1649728
4026	10.1	5.5	0.3	chr17	60640868	60641719	(22615722)	C	L1PA16	LINE/L1	(278)	5888	4995	1649728
31	31.4	2.0	0.0	chr17	61157498	61157599	(22099842)	+	(CT)n	Simple_repeat	1	104	(0)	1650594
16	32.1	0.0	0.0	chr17	61514460	61514507	(21742934)	+	GA-rich	Low_complexity	1	48	(0)	1651174
1906	15.1	0.4	0.0	chr17	61880471	61880742	(21376699)	+	AluJb	SINE/Alu	1	273	(39)	1651775
2179	12.2	2.2	0.0	chr17	62048124	62048427	(21209014)	+	AluSz6	SINE/Alu	1	311	(1)	1652160
668	28.7	6.7	5.4	chr17	62048506	62048873	(21208568)	+	HAL1	LINE/L1	445	817	(1690)	1652161
1943	13.4	7.2	11.4	chr17	62912330	62912734	(20344707)	+	MSTD	LTR/ERVL-MaLR	10	396	(0)	1653932
369	32.4	12.7	1.8	chr17	63550930	63551146	(19706295)	C	MIRb	SINE/MIR	(22)	246	3	1654904
2375	9.8	0.0	0.0	chr17	64604665	64604961	(18652480)	+	AluSg	SINE/Alu	2	298	(12)	1656886
23	28.5	5.8	2.1	chr17	65750959	65751095	(17506346)	+	A-rich	Low_complexity	1	145	(0)	1659223
12	23.5	4.2	2.0	chr17	65751028	65751075	(17506366)	+	G-rich	Low_complexity	1	50	(0)	1659224
16	20.5	6.8	3.8	chr17	65751076	65751097	(17506344)	+	GA-rich	Low_complexity	5	79	(0)	1659225
149	14.0	2.5	1.4	chr17	66224503	66224784	(17032657)	+	GA-rich	Low_complexity	1	289	(0)	1659868
2243	8.9	3.0	0.3	chr17	66224797	66225087	(17032354)	+	AluSg7	SINE/Alu	11	309	(0)	1659869
181	32.6	6.7	1.2	chr17	66272730	66272826	(16984615)	C	MIRc	SINE/MIR	(106)	124	24	1659996
181	32.4	1.4	0.0	chr17	66579895	66579962	(16677479)	+	L2c	LINE/L2	3074	3142	(245)	1660493
13184	12.6	3.1	11.4	chr17	67095568	67097416	(16160025)	C	Tigger1	DNA/TcMar-Tigger	(617)	1801	3	1661370
737	26.9	9.6	3.7	chr17	67213150	67213341	(16044100)	+	L1ME3G	LINE/L1	131	345	(579)	1661539
1593	18.6	0.8	1.3	chr17	67315751	67316064	(15941377)	C	L1MB5	LINE/L1	(9)	6165	5864	1661780
33	2.6	2.6	0.0	chr17	67316065	67316103	(15941338)	+	(TTCCCC)n	Simple_repeat	1	40	(0)	1661781
993	25.1	4.5	10.7	chr17	67316104	67316118	(15941323)	C	L1MB5	LINE/L1	(315)	5863	5863	1661780
1952	17.8	1.0	0.7	chr17	67316119	67316427	(15941014)	C	AluJb	SINE/Alu	(2)	310	1	1661782
2227	9.3	1.3	1.3	chr17	67364902	67365203	(15892238)	+	AluSq2	SINE/Alu	1	302	(11)	1661885
867	27.3	3.1	3.8	chr17	67365235	67365497	(15891944)	+	MIR	SINE/MIR	2	262	(0)	1661886
1921	9.2	0.4	1.9	chr17	67408287	67408547	(15848894)	+	AluSx	SINE/Alu	44	300	(12)	1661978
30	2.9	2.8	0.0	chr17	67408569	67408604	(15848837)	+	(TTTCCC)n	Simple_repeat	1	37	(0)	1661979
37	21.2	1.9	2.8	chr17	67408605	67408677	(15848764)	+	(CTTT)n	Simple_repeat	1	72	(0)	1661980
78	25.4	2.6	5.0	chr17	68050123	68050136	(15207305)	+	(TTCC)n	Simple_repeat	1	13	(0)	1663407
27	2.7	0.0	6.8	chr17	68050137	68050180	(15207261)	+	(TCCCT)n	Simple_repeat	1	44	(0)	1663408
78	25.4	2.6	5.0	chr17	68050181	68050474	(15206967)	+	(TTCC)n	Simple_repeat	2	288	(0)	1663409
248	32.2	6.5	0.0	chr17	68107062	68107148	(15150293)	C	MIRb	SINE/MIR	(14)	254	162	1663543
185	30.1	14.9	2.8	chr17	68107240	68107345	(15150096)	+	L2c	LINE/L2	3041	3161	(226)	1663544
13	15.6	2.5	4.9	chr17	68532785	68532824	(14724617)	+	(TTCCTCT)n	Simple_repeat	1	41	(0)	1664352
295	18.3	0.0	4.8	chr17	68573342	68573404	(14684037)	C	MSTC	LTR/ERVL-MaLR	(2)	406	347	1664425
121	12.3	2.9	3.6	chr17	68573421	68573666	(14683775)	+	(CTTT)n	Simple_repeat	1	253	(0)	1664426
258	16.3	0.0	0.0	chr17	68627538	68627586	(14629855)	C	HAL1	LINE/L1	(1487)	1020	972	1664526
255	11.9	0.0	0.0	chr17	68627595	68627636	(14629805)	C	HAL1	LINE/L1	(1490)	1017	976	1664526
41	17.7	2.9	2.8	chr17	68627655	68627759	(14629682)	+	(TTCTCT)n	Simple_repeat	1	105	(0)	1664529
315	30.8	2.2	4.2	chr17	68627787	68627976	(14629465)	C	LTR79	LTR/ERVL	(61)	466	281	1664530
202	16.7	2.3	0.0	chr17	68692713	68692754	(14564687)	C	MER5B	DNA/hAT-Charlie	(0)	178	136	1664649
262	20.4	0.9	21.5	chr17	68692755	68692898	(14564543)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	1664650
466	24.8	2.1	5.4	chr17	68692899	68693046	(14564395)	C	MER5B	DNA/hAT-Charlie	(35)	143	1	1664651
13	23.7	3.3	4.8	chr17	69654780	69654840	(13602601)	+	(TCATTTT)n	Simple_repeat	1	63	(0)	1666135
2408	8.3	0.7	0.0	chr17	71924543	71924853	(11332588)	+	AluY	SINE/Alu	9	311	(0)	1669532
68	0.0	0.0	0.0	chr17	71924854	71924914	(11332527)	+	(AAGGA)n	Simple_repeat	1	61	(0)	1669533
51	24.7	3.0	5.8	chr17	71924915	71924938	(11332503)	+	A-rich	Low_complexity	203	226	(0)	1669534
1026	23.1	14.7	7.6	chr17	72976953	72977467	(10279974)	+	MLT1E2	LTR/ERVL-MaLR	14	649	(4)	1671353
228	22.0	0.0	0.0	chr17	73187525	73187574	(10069867)	C	LSU-rRNA_Hsa	rRNA	(399)	4636	4587	1671819
54	21.9	4.2	4.0	chr17	73289752	73289941	(9967500)	+	GA-rich	Low_complexity	1	198	(0)	1672005
101	18.0	3.3	4.3	chr17	73912429	73912700	(9344741)	+	(TTCC)n	Simple_repeat	1	281	(0)	1673167
143	25.2	0.3	0.3	chr17	74054828	74055062	(9202379)	+	(TCTCTC)n	Simple_repeat	1	236	(0)	1673412
434	34.9	6.7	2.7	chr17	74734874	74735129	(8522312)	+	L1MC4	LINE/L1	963	1229	(4986)	1674735
20	36.0	5.3	0.0	chr17	74735130	74735242	(8522199)	+	GA-rich	Low_complexity	1	119	(0)	1674736
1763	12.5	1.7	7.0	chr17	75172012	75172323	(8085118)	C	AluSx	SINE/Alu	(15)	297	3	1675517
151	21.3	3.2	3.5	chr17	75413153	75413385	(7844056)	+	(TTCC)n	Simple_repeat	1	227	(0)	1676061
2297	12.7	0.0	0.0	chr17	75413386	75413692	(7843749)	C	AluSx1	SINE/Alu	(5)	307	1	1676062
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
1942	15.1	1.3	5.2	chr17	77888598	77888922	(5368519)	+	AluSx	SINE/Alu	1	312	(0)	1680822
28	30.7	5.5	0.8	chr17	77888923	77888946	(5368495)	+	GA-rich	Low_complexity	1	36	(98)	1680823
20	24.0	0.0	0.0	chr17	77888947	77888988	(5368453)	+	A-rich	Low_complexity	1	42	(0)	1680824
28	30.7	5.5	0.8	chr17	77888989	77889049	(5368392)	+	GA-rich	Low_complexity	37	134	(0)	1680823
197	34.6	12.0	8.6	chr17	78089604	78089963	(5167478)	C	L2b	LINE/L2	(89)	3286	2913	1681189
372	20.8	20.4	2.7	chr17	78212413	78212560	(5044881)	+	L1MC4	LINE/L1	7738	7918	(124)	1681415
35	25.1	4.8	2.3	chr17	78212614	78212739	(5044702)	+	GA-rich	Low_complexity	1	132	(0)	1681416
417	17.4	5.2	3.5	chr17	78212746	78212858	(5044583)	+	L1MC4	LINE/L1	7912	8026	(16)	1681415
90	11.2	1.6	5.7	chr17	78346948	78347137	(4910304)	+	(TCTT)n	Simple_repeat	1	193	(0)	1681701
61	14.2	2.4	2.3	chr17	79652497	79652622	(3604819)	+	A-rich	Low_complexity	1	129	(0)	1683701
1203	27.1	19.0	3.0	chr17	79652624	79653455	(3603986)	+	HAL1	LINE/L1	1105	2087	(420)	1683699
2176	8.8	0.0	1.8	chr17	79880787	79881096	(3376345)	C	AluSc	SINE/Alu	(0)	309	1	1684096
26	16.7	0.0	3.4	chr17	80035192	80035250	(3222191)	+	(CTTT)n	Simple_repeat	1	59	(0)	1684337
368	28.7	7.5	3.7	chr17	80224480	80224633	(3032808)	C	MIRb	SINE/MIR	(3)	265	102	1684688
1896	14.2	3.2	2.9	chr17	80359246	80359554	(2897887)	+	AluJr	SINE/Alu	3	312	(0)	1684934
42	18.4	2.3	1.1	chr17	80359557	80359652	(2897789)	+	GA-rich	Low_complexity	1	97	(0)	1684935
40	25.8	1.7	1.7	chr17	80594982	80595097	(2662344)	+	GA-rich	Low_complexity	1	118	(0)	1685283
235	1.7	0.0	2.4	chr17	80665318	80665564	(2591877)	+	(TTTCC)n	Simple_repeat	1	247	(0)	1685388
305	26.9	3.3	12.1	chr17	80775197	80775273	(2482168)	C	L1MC	LINE/L1	(2947)	3199	3126	1685512
730	21.1	0.8	0.8	chr17	80775277	80775409	(2482032)	C	AluJr	SINE/Alu	(179)	133	1	1685513
39	12.8	1.4	1.4	chr17	81096926	81096996	(2160445)	+	GA-rich	Low_complexity	1	72	(0)	1685859
1299	22.7	4.1	0.3	chr17	81723588	81723919	(1533522)	+	L1M4	LINE/L1	5353	5697	(477)	1686695
42	7.8	4.3	5.2	chr17	81982709	81982800	(1274641)	+	(TTTC)n	Simple_repeat	1	96	(0)	1687012
2087	9.7	0.7	9.1	chr17	81982803	81983142	(1274299)	C	AluSq	SINE/Alu	(0)	313	3	1687013
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
39	4.5	0.0	0.0	chr17	82424826	82424871	(832570)	+	(AGAAGGTTAG)n	Simple_repeat	1	46	(0)	1687616
1487	24.4	0.0	0.7	chr17	82609192	82609470	(647971)	+	AluJb	SINE/Alu	2	278	(34)	1687960
1552	23.0	7.2	5.1	chr17	82609471	82610239	(647202)	+	L1M4	LINE/L1	1269	1718	(5799)	1687959
694	25.1	7.6	3.0	chr18	220756	221120	(80152165)	C	L1MEd	LINE/L1	(2895)	3251	2869	1689428
458	28.1	7.3	2.2	chr18	574336	574517	(79798768)	+	Charlie16a	DNA/hAT-Charlie	147	338	(4)	1690032
345	25.0	4.9	1.7	chr18	2657234	2657351	(77715934)	+	L2a	LINE/L2	3304	3425	(1)	1693039
476	27.9	7.5	5.8	chr18	2718891	2719217	(77654068)	C	HAL1	LINE/L1	(933)	1574	1242	1693157
22	15.0	0.0	4.0	chr18	2719218	2719277	(77654008)	+	(TTCCT)n	Simple_repeat	1	57	(0)	1693158
499	24.0	8.2	6.4	chr18	2719279	2719295	(77653990)	C	HAL1	LINE/L1	(1233)	1274	1257	1693159
2051	12.0	1.0	2.7	chr18	2719296	2719596	(77653689)	C	AluSx1	SINE/Alu	(16)	296	1	1693160
69	14.1	3.3	5.8	chr18	2823302	2823483	(77549802)	+	(TCCT)n	Simple_repeat	1	188	(0)	1693330
261	29.6	7.3	1.6	chr18	3094442	3094592	(77278693)	+	MIRb	SINE/MIR	2	175	(93)	1693760
149	12.7	4.3	1.9	chr18	3186711	3187011	(77186274)	+	A-rich	Low_complexity	1	314	(0)	1693926
418	21.3	12.2	6.5	chr18	3604749	3604964	(76768321)	+	MER112	DNA/hAT-Charlie	5	234	(27)	1694735
171	16.3	0.5	5.4	chr18	3772093	3772429	(76600856)	+	(CTTT)n	Simple_repeat	1	364	(28)	1695027
23	18.9	0.0	0.0	chr18	3874268	3874315	(76498970)	+	(TCTC)n	Simple_repeat	1	48	(0)	1695192
20	18.4	0.0	0.0	chr18	5896431	5896467	(74476818)	+	GA-rich	Low_complexity	1	37	(0)	1697836
21	7.3	4.3	4.1	chr18	6088608	6088655	(74284630)	+	(GAGAAGT)n	Simple_repeat	1	48	(0)	1698091
450	34.8	6.5	0.5	chr18	6362519	6362706	(74010579)	C	MIRb	SINE/MIR	(68)	200	1	1698447
368	27.8	8.0	0.0	chr18	9104961	9105122	(71268163)	C	L1ME4a	LINE/L1	(189)	5935	5760	1702467
195	26.7	1.6	1.6	chr18	9142258	9142318	(71230967)	C	MIRc	SINE/MIR	(24)	244	184	1702534
2041	20.6	6.0	1.5	chr18	9627642	9628119	(70745166)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	1	1703365
14	20.7	1.6	8.1	chr18	10444443	10444503	(69928782)	+	G-rich	Low_complexity	1	62	(0)	1704569
257	29.0	3.1	4.1	chr18	10530026	10530122	(69843163)	C	L2c	LINE/L2	(1344)	2075	1980	1704658
31	0.0	0.0	0.0	chr18	10530189	10530217	(69843068)	+	(T)n	Simple_repeat	1	29	(0)	1704660
183	30.1	12.3	0.0	chr18	10530254	10530389	(69842896)	+	L2	LINE/L2	2245	2399	(1020)	1704661
77	23.1	5.2	1.9	chr18	11574621	11574869	(68798416)	+	A-rich	Low_complexity	1	262	(0)	1706005
226	26.6	8.0	2.1	chr18	12883124	12883265	(67490020)	+	L1ME1	LINE/L1	6015	6165	(14)	1708291
180	31.7	4.7	0.0	chr18	12946944	12947044	(67426241)	+	L2	LINE/L2	307	412	(3007)	1708432
2347	10.5	0.7	2.0	chr18	21249573	21249876	(59123409)	+	AluSq2	SINE/Alu	1	300	(13)	1712222
593	24.3	20.8	5.7	chr18	21249877	21250200	(59123085)	C	L2a	LINE/L2	(87)	3339	2930	1712221
49	19.9	5.8	3.3	chr18	21402362	21402528	(58970757)	+	(TCCT)n	Simple_repeat	1	171	(0)	1712509
1772	17.4	4.6	0.3	chr18	21402529	21402822	(58970463)	C	AluJb	SINE/Alu	(5)	307	1	1712510
21	20.4	1.9	0.0	chr18	21444563	21444614	(58928671)	+	(TTTCC)n	Simple_repeat	1	53	(0)	1712599
756	27.3	11.9	4.0	chr18	21650386	21650755	(58722530)	+	MLT1J	LTR/ERVL-MaLR	110	512	(0)	1713024
354	30.8	5.5	4.9	chr18	21763758	21763921	(58609364)	+	L2	LINE/L2	2636	2800	(619)	1713267
486	17.1	4.7	0.0	chr18	21763923	21764004	(58609281)	C	AluJb	SINE/Alu	(0)	312	227	1713268
62	10.5	6.1	5.2	chr18	22129939	22130073	(58243212)	+	(TTCCC)n	Simple_repeat	1	133	(0)	1714001
45	1.9	3.5	1.7	chr18	22130074	22130130	(58243155)	+	(TCTT)n	Simple_repeat	1	59	(0)	1714002
62	10.5	6.1	5.2	chr18	22130131	22130157	(58243128)	+	(TTCCC)n	Simple_repeat	4	34	(0)	1714003
58	0.0	0.0	0.0	chr18	22130160	22130211	(58243074)	+	(CCTC)n	Simple_repeat	1	52	(0)	1714004
120	29.2	3.0	0.0	chr18	22204077	22204391	(58168894)	+	(TCTC)n	Simple_repeat	1	370	(0)	1714125
796	31.7	7.2	9.3	chr18	22295208	22295785	(58077500)	+	L2	LINE/L2	1659	2214	(1205)	1714318
8683	12.5	3.5	2.8	chr18	23011212	23011439	(57361846)	+	Tigger1	DNA/TcMar-Tigger	2	238	(2180)	1715386
120	24.3	2.4	5.3	chr18	23411129	23411554	(56961731)	+	GA-rich	Low_complexity	1	436	(0)	1716141
21	28.8	3.6	0.0	chr18	23487866	23487949	(56885336)	+	A-rich	Low_complexity	1	87	(0)	1716302
198	27.6	7.2	0.8	chr18	23740615	23740731	(56632554)	+	L3	LINE/CR1	3740	3864	(235)	1716793
4798	12.8	5.0	1.1	chr18	24826442	24826782	(55546503)	+	LTR39	LTR/ERV1	426	781	(2)	1718528
190	34.1	3.4	5.6	chr18	24826849	24826938	(55546347)	+	L2b	LINE/L2	3083	3170	(205)	1718530
756	27.4	3.3	8.2	chr18	25313222	25313575	(55059710)	+	Charlie7	DNA/hAT-Charlie	309	644	(1968)	1719162
30	10.3	0.0	0.0	chr18	25352596	25352638	(55020647)	+	(A)n	Simple_repeat	1	43	(0)	1719218
790	10.4	0.0	1.9	chr18	26228656	26228761	(54144524)	+	AluSz6	SINE/Alu	176	279	(33)	1720580
59	29.6	1.4	3.1	chr18	31117339	31117557	(49255728)	+	(TCTT)n	Simple_repeat	1	222	(0)	1727229
83	23.0	2.3	4.4	chr18	31614075	31614339	(48758946)	+	GA-rich	Low_complexity	1	271	(0)	1727943
300	38.4	5.7	2.1	chr18	31614349	31614585	(48758700)	C	L2c	LINE/L2	(165)	3222	2977	1727942
16	17.2	4.9	2.3	chr18	31819885	31819925	(48553360)	+	(CT)n	Simple_repeat	1	43	(0)	1728248
657	25.2	4.4	1.3	chr18	31820013	31820165	(48553120)	+	MER58A	DNA/hAT-Charlie	66	223	(1)	1728249
2240	10.9	1.3	1.3	chr18	32107109	32107420	(48265865)	C	AluSx	SINE/Alu	(0)	312	1	1728864
15	21.7	3.5	3.4	chr18	33573515	33573571	(46799714)	+	A-rich	Low_complexity	1	59	(0)	1730897
14	24.6	0.0	3.9	chr18	34225331	34225382	(46147903)	+	(TCCCCCT)n	Simple_repeat	1	52	(0)	1731670
24	19.3	1.7	1.7	chr18	34421139	34421196	(45952089)	+	GA-rich	Low_complexity	1	59	(0)	1731937
370	31.1	0.8	7.7	chr18	34860791	34860933	(45512352)	C	MIRb	SINE/MIR	(24)	244	112	1732515
53	17.1	0.0	3.5	chr18	36380429	36380543	(43992742)	+	(CTCC)n	Simple_repeat	1	115	(0)	1734721
66	14.0	1.4	3.6	chr18	36380528	36380665	(43992620)	+	(TTTTC)n	Simple_repeat	1	140	(0)	1734722
102	35.2	1.6	3.0	chr18	37512378	37512878	(42860407)	+	(TCC)n	Simple_repeat	1	509	(0)	1736153
103	20.9	3.0	1.8	chr18	37565666	37565932	(42807353)	+	(TC)n	Simple_repeat	1	275	(0)	1736226
352	25.2	9.0	2.2	chr18	38941265	38941398	(41431887)	+	LTR12F	LTR/ERV1	237	380	(139)	1738041
25	15.0	3.7	0.0	chr18	38941401	38941454	(41431831)	+	(TTTGCT)n	Simple_repeat	1	56	(0)	1738042
541	19.2	3.2	3.2	chr18	38941462	38941585	(41431700)	+	LTR12F	LTR/ERV1	370	493	(26)	1738041
132	23.1	2.1	1.4	chr18	40494630	40494966	(39878319)	+	A-rich	Low_complexity	1	344	(0)	1740090
1742	16.6	0.7	4.4	chr18	41942111	41942429	(38430856)	+	AluJo	SINE/Alu	3	309	(3)	1742105
51	5.9	5.3	3.0	chr18	41942430	41942524	(38430761)	+	(GGAAA)n	Simple_repeat	1	100	(0)	1742106
1603	20.8	1.0	1.3	chr18	44513045	44513352	(35859933)	+	AluJo	SINE/Alu	3	309	(3)	1745550
39	29.3	2.4	3.5	chr18	44513355	44513521	(35859764)	+	GA-rich	Low_complexity	1	171	(0)	1745551
13	29.3	3.5	4.4	chr18	44803518	44803604	(35569681)	+	(CCCTTT)n	Simple_repeat	1	90	(0)	1745986
5515	20.2	9.4	3.3	chr18	46001972	46002676	(34370609)	C	L1MDa	LINE/L1	(4700)	1933	1229	1747792
627	20.5	7.3	2.4	chr18	46064040	46064209	(34309076)	+	MLT1J	LTR/ERVL-MaLR	334	512	(0)	1747911
34	12.6	0.0	0.0	chr18	46064246	46064308	(34308977)	+	(T)n	Simple_repeat	1	63	(0)	1747912
2008	11.7	0.0	3.1	chr18	46064309	46064599	(34308686)	C	AluSx1	SINE/Alu	(30)	282	1	1747913
1342	19.3	2.4	3.3	chr18	46140118	46140181	(34233104)	C	L1ME3A	LINE/L1	(982)	6255	6198	1748086
410	21.8	0.9	0.9	chr18	46140179	46140289	(34232996)	C	L1ME3A	LINE/L1	(4675)	2658	2548	1748086
85	8.3	6.7	3.1	chr18	46140298	46140477	(34232808)	+	(TTCTCC)n	Simple_repeat	1	192	(0)	1748091
834	17.0	11.7	0.0	chr18	47065519	47065677	(33307608)	+	AluSx	SINE/Alu	133	312	(0)	1749632
1793	12.5	6.4	2.0	chr18	47065702	47065998	(33307287)	+	AluJb	SINE/Alu	1	311	(1)	1749635
241	30.0	0.0	5.4	chr18	48169532	48169605	(32203680)	C	MIR3	SINE/MIR	(127)	141	72	1751454
284	20.9	3.4	2.3	chr18	48169685	48169772	(32203513)	+	MER94	DNA/hAT-Blackjack	15	103	(31)	1751455
810	10.3	0.0	0.0	chr18	48169784	48169890	(32203395)	C	U6	snRNA	(0)	107	1	1751456
342	30.5	3.5	3.9	chr18	48273548	48273779	(32099506)	+	L1ME3Cz	LINE/L1	766	996	(1)	1751603
477	33.9	7.0	1.7	chr18	49174252	49174482	(31198803)	C	MIR	SINE/MIR	(6)	256	13	1753069
281	29.2	1.1	0.0	chr18	49465178	49465266	(30908019)	+	L3	LINE/CR1	3910	3999	(100)	1753575
36	11.2	1.7	0.0	chr18	49579739	49579798	(30793487)	+	(CCTTT)n	Simple_repeat	1	61	(0)	1753833
2039	12.8	1.6	1.6	chr18	49579799	49580110	(30793175)	C	AluSp	SINE/Alu	(0)	313	2	1753834
18	15.5	0.0	0.0	chr18	55322235	55322264	(25051021)	+	(CT)n	Simple_repeat	1	30	(0)	1762524
23	3.7	0.0	0.0	chr18	55322423	55322450	(25050835)	+	(A)n	Simple_repeat	1	28	(0)	1762525
31	11.5	0.0	0.0	chr18	55585862	55585908	(24787377)	+	(CT)n	Simple_repeat	1	47	(0)	1762863
11	20.8	6.8	0.0	chr18	55588576	55588619	(24784666)	+	(CTCACT)n	Simple_repeat	1	47	(0)	1762870
4482	14.1	6.9	0.5	chr18	57523943	57524677	(22848608)	+	Tigger1	DNA/TcMar-Tigger	24	808	(1610)	1765675
876	13.8	0.0	0.0	chr18	58475382	58475504	(21897781)	+	AluJr	SINE/Alu	3	125	(187)	1767310
36	18.1	6.7	3.1	chr18	58475522	58475640	(21897645)	+	A-rich	Low_complexity	1	127	(0)	1767311
1058	17.8	0.0	0.0	chr18	58475644	58475806	(21897479)	+	AluJb	SINE/Alu	129	291	(21)	1767312
24	25.8	2.4	2.4	chr18	63197631	63197712	(17175573)	+	G-rich	Low_complexity	1	84	(0)	1774697
2058	16.4	0.0	0.0	chr18	63323361	63323672	(17049613)	+	AluJb	SINE/Alu	1	312	(0)	1774873
3430	18.4	2.8	4.3	chr18	63367935	63367996	(17005289)	C	L1MB8	LINE/L1	(9)	6169	6113	1774951
174	26.0	3.9	2.1	chr18	64318519	64319105	(16054180)	+	(TCTT)n	Simple_repeat	1	610	(0)	1776319
179	0.0	0.0	1.2	chr18	64389477	64389640	(15983645)	+	(TTCCT)n	Simple_repeat	1	164	(0)	1776405
1872	14.8	4.1	0.7	chr18	64389641	64389923	(15983362)	C	AluSz	SINE/Alu	(17)	295	3	1776406
234	31.8	3.3	1.1	chr18	74644697	74644785	(5728500)	C	MIRc	SINE/MIR	(112)	156	66	1790168
37	0.0	0.0	0.0	chr18	74657902	74657935	(5715350)	+	(TTC)n	Simple_repeat	1	34	(0)	1790176
40	14.2	2.5	8.0	chr18	77055495	77055616	(3317669)	+	(TTTC)n	Simple_repeat	1	125	(0)	1792992
595	29.9	12.0	6.2	chr18	80129515	80130194	(243091)	C	L1MC5a	LINE/L1	(498)	2279	1555	1796181
1186	18.8	21.0	0.4	chr18	80132237	80132508	(240777)	+	MER2	DNA/TcMar-Tigger	2	344	(1)	1796185
12	36.5	2.7	1.3	chr18	80132577	80132592	(240693)	+	(TTCC)n	Simple_repeat	1	17	(0)	1796186
32	2.6	0.0	4.7	chr18	80132593	80132635	(240650)	+	(TCTCTT)n	Simple_repeat	1	43	(0)	1796187
44	13.2	7.5	0.0	chr18	80132636	80132655	(240630)	+	(TC)n	Simple_repeat	1	48	(59)	1796188
24	14.3	5.2	1.6	chr18	80132656	80132713	(240572)	+	(CTCCC)n	Simple_repeat	1	61	(0)	1796189
44	13.2	7.5	0.0	chr18	80132714	80132735	(240550)	+	(TC)n	Simple_repeat	49	107	(0)	1796188
1950	12.6	4.7	0.3	chr18	80132736	80133020	(240265)	C	AluSz	SINE/Alu	(14)	298	1	1796190
48	24.4	2.2	5.3	chr19	551580	551729	(58065887)	+	(TCTT)n	Simple_repeat	1	145	(0)	1797124
25	30.1	0.0	1.2	chr19	1203740	1203823	(57413793)	+	GA-rich	Low_complexity	1	84	(0)	1798404
83	22.1	3.8	4.4	chr19	1480531	1480817	(57136799)	+	GA-rich	Low_complexity	1	298	(0)	1798845
415	32.6	15.6	1.2	chr19	1570011	1570293	(57047323)	C	L1MC4	LINE/L1	(4931)	1284	943	1799041
247	15.2	6.9	2.8	chr19	1669604	1670237	(56947379)	+	(CTTCC)n	Simple_repeat	2	661	(0)	1799248
2284	12.5	0.0	0.0	chr19	2387213	2387523	(56230093)	+	AluSq	SINE/Alu	1	311	(2)	1800682
1411	11.3	1.7	22.5	chr19	2387524	2387766	(56229850)	+	AluJr	SINE/Alu	130	301	(11)	1800681
400	29.0	4.2	4.0	chr19	2507173	2507369	(56110247)	+	MIRc	SINE/MIR	22	207	(61)	1800969
89	13.7	2.7	2.7	chr19	2602870	2603052	(56014564)	+	(TTTC)n	Simple_repeat	1	188	(0)	1801209
2275	11.0	1.3	0.0	chr19	2603056	2603364	(56014252)	C	AluSq2	SINE/Alu	(0)	313	1	1801210
2294	11.3	0.3	2.5	chr19	3298595	3298913	(55318703)	+	AluSp	SINE/Alu	1	312	(1)	1802864
97	11.0	2.6	6.8	chr19	3298917	3299146	(55318470)	+	GA-rich	Low_complexity	1	236	(0)	1802865
1843	14.9	3.1	0.0	chr19	3332991	3333271	(55284345)	C	AluSx1	SINE/Alu	(17)	295	6	1802962
35	11.1	5.9	3.3	chr19	3333278	3333284	(55284332)	+	(CTTT)n	Simple_repeat	1	89	(0)	1802963
33	10.0	10.4	0.0	chr19	3333285	3333361	(55284255)	+	(TCTTTC)n	Simple_repeat	1	85	(0)	1802964
27	3.5	0.0	0.0	chr19	3333374	3333403	(55284213)	+	(TCCT)n	Simple_repeat	1	30	(0)	1802965
1649	19.0	0.0	7.0	chr19	3333404	3333734	(55283882)	C	AluJo	SINE/Alu	(4)	308	1	1802966
123	21.5	2.8	0.0	chr19	3370477	3370763	(55246853)	+	(TCTC)n	Simple_repeat	1	295	(0)	1803081
391	28.9	4.2	3.6	chr19	3432315	3432479	(55185137)	C	L2b	LINE/L2	(7)	3368	3203	1803271
451	25.2	3.0	3.0	chr19	3432523	3432657	(55184959)	C	MIRb	SINE/MIR	(83)	185	51	1803272
2392	5.7	1.3	1.3	chr19	3432669	3432968	(55184648)	C	AluY	SINE/Alu	(10)	301	2	1803273
2383	11.6	0.0	0.0	chr19	4734779	4735088	(53882528)	+	AluSx	SINE/Alu	2	311	(1)	1806298
21	22.1	4.7	0.0	chr19	4735092	4735155	(53882461)	+	A-rich	Low_complexity	1	67	(0)	1806299
2265	10.7	0.3	0.0	chr19	4735272	4735569	(53882047)	+	AluSp	SINE/Alu	2	300	(13)	1806300
14	13.2	2.9	2.8	chr19	5002328	5002362	(53615254)	+	(TTTTGG)n	Simple_repeat	1	36	(0)	1807064
678	19.0	0.0	1.4	chr19	5002521	5002665	(53614951)	C	FLAM_C	SINE/Alu	(82)	220	14	1807065
1155	13.9	1.2	0.0	chr19	5326540	5326705	(53290911)	+	FRAM	SINE/Alu	1	168	(8)	1807673
60	21.7	2.8	3.2	chr19	5326707	5326886	(53290730)	+	GA-rich	Low_complexity	1	185	(0)	1807674
1877	12.0	0.8	1.1	chr19	5440101	5440366	(53177250)	+	AluSz	SINE/Alu	48	312	(0)	1807993
317	34.9	9.6	1.3	chr19	5440405	5440622	(53176994)	+	L1M4c	LINE/L1	955	1192	(5192)	1807994
95	19.5	2.3	1.4	chr19	5501989	5502202	(53115414)	+	A-rich	Low_complexity	1	219	(0)	1808169
427	26.2	4.2	4.8	chr19	5655491	5655658	(52961958)	C	MER68B	LTR/ERVL	(396)	168	2	1808527
391	28.5	3.7	0.6	chr19	5655719	5655877	(52961739)	+	Tigger8	DNA/TcMar-Tigger	216	379	(288)	1808528
2519	7.1	0.0	0.0	chr19	5793849	5794156	(52823460)	+	AluSc	SINE/Alu	1	308	(1)	1808854
336	28.1	2.6	6.6	chr19	5794157	5794207	(52823409)	C	MIRc	SINE/MIR	(129)	139	88	1808855
1633	16.1	3.3	2.7	chr19	5794352	5794649	(52822967)	+	AluJr	SINE/Alu	1	300	(12)	1808856
1772	15.6	1.0	5.7	chr19	5817055	5817368	(52800248)	+	AluJo	SINE/Alu	1	299	(13)	1808921
89	24.8	1.8	3.8	chr19	5817370	5817653	(52799963)	+	GA-rich	Low_complexity	1	289	(0)	1808922
299	33.5	10.4	5.0	chr19	5968780	5969140	(52648476)	C	L2b	LINE/L2	(19)	3356	2974	1809185
123	16.7	3.4	5.7	chr19	6429299	6429653	(52187963)	+	GA-rich	Low_complexity	1	367	(0)	1810214
192	26.3	1.3	5.9	chr19	6586929	6587548	(52030068)	+	GA-rich	Low_complexity	110	754	(0)	1810652
174	31.0	3.4	0.7	chr19	6589090	6589379	(52028237)	+	(CT)n	Simple_repeat	1	299	(0)	1810658
328	19.7	1.1	0.6	chr19	6709963	6710622	(51906994)	+	GA-rich	Low_complexity	1	667	(0)	1810972
454	30.2	11.0	2.0	chr19	7150846	7151092	(51466524)	C	L1MC4	LINE/L1	(4987)	1228	957	1812104
31	8.3	2.0	0.0	chr19	7197322	7197372	(51420244)	+	(GAGT)n	Simple_repeat	1	52	(0)	1812249
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
1637	16.9	0.0	3.7	chr19	7250014	7250178	(51367438)	+	AluJo	SINE/Alu	139	302	(10)	1812403
64	36.4	6.7	0.8	chr19	7250179	7250640	(51366976)	+	GA-rich	Low_complexity	1	493	(0)	1812405
1008	19.8	0.6	0.0	chr19	7823174	7823345	(50794271)	+	AluJb	SINE/Alu	131	303	(9)	1813808
93	15.7	2.4	3.3	chr19	7823346	7823640	(50793976)	+	G-rich	Low_complexity	1	292	(0)	1813809
495	24.5	2.1	3.5	chr19	8036690	8036833	(50580783)	+	MER74A	LTR/ERVL	1	142	(416)	1814230
76	24.2	4.0	3.5	chr19	8036834	8036985	(50580631)	+	(TCTT)n	Simple_repeat	1	150	(0)	1814231
2048	13.4	1.6	1.0	chr19	8036986	8037290	(50580326)	C	AluSz	SINE/Alu	(4)	308	2	1814232
1908	14.0	2.3	4.5	chr19	8081957	8082270	(50535346)	C	AluSx1	SINE/Alu	(5)	307	1	1814351
70	18.0	3.7	2.6	chr19	8082271	8082439	(50535177)	+	(TTTC)n	Simple_repeat	1	171	(0)	1814352
46	0.0	0.0	3.9	chr19	8082440	8082490	(50535126)	+	(CTTC)n	Simple_repeat	1	51	(0)	1814353
106	25.1	3.0	0.7	chr19	8352112	8352392	(50265224)	+	GA-rich	Low_complexity	14	301	(0)	1815105
2519	8.0	0.0	0.3	chr19	10205323	10205634	(48411982)	+	AluY	SINE/Alu	1	311	(0)	1819148
1673	14.5	1.6	1.6	chr19	10428872	10429126	(48188490)	+	AluSz6	SINE/Alu	53	307	(5)	1819718
81	8.3	12.1	1.4	chr19	10429130	10429328	(48188288)	+	A-rich	Low_complexity	1	223	(0)	1819719
348	26.7	7.5	0.0	chr19	10473666	10473800	(48143816)	+	MIR1_Amn	SINE/MIR	4	149	(81)	1819840
2213	10.0	1.0	1.0	chr19	10473803	10474101	(48143515)	+	AluSz	SINE/Alu	1	299	(13)	1819841
2010	12.3	0.3	0.3	chr19	10483321	10483604	(48134012)	C	AluSp	SINE/Alu	(29)	284	1	1819869
1783	6.6	0.0	0.0	chr19	10483810	10484022	(48133594)	C	AluSx	SINE/Alu	(99)	213	1	1819870
1730	22.4	0.7	6.1	chr19	10528003	10528269	(48089347)	C	L1MB8	LINE/L1	(355)	5823	5572	1819992
1821	17.3	0.0	6.9	chr19	10528271	10528281	(48089335)	C	AluJo	SINE/Alu	(0)	312	303	1819996
44	1.8	5.0	1.6	chr19	10528282	10528341	(48089275)	+	(TTTCC)n	Simple_repeat	1	63	(0)	1819997
1821	17.3	0.0	6.9	chr19	10528342	10528515	(48089101)	C	AluJo	SINE/Alu	(10)	302	134	1819996
40	23.6	0.9	3.4	chr19	10753361	10753476	(47864140)	+	(CTTTCC)n	Simple_repeat	1	117	(0)	1820608
13	13.1	8.5	3.9	chr19	10753437	10753483	(47864133)	+	(CTTCT)n	Simple_repeat	1	51	(0)	1820609
316	25.4	0.0	7.6	chr19	10962071	10962189	(47655427)	+	MIRb	SINE/MIR	38	147	(121)	1821126
1823	13.4	0.0	4.3	chr19	10981694	10981998	(47635618)	+	AluJo	SINE/Alu	1	292	(20)	1821171
2186	11.1	0.0	0.0	chr19	11092445	11092733	(47524883)	C	AluSg	SINE/Alu	(16)	294	6	1821406
745	26.8	12.1	5.5	chr19	11191543	11191781	(47425835)	+	MLT1K	LTR/ERVL-MaLR	198	449	(146)	1821701
1902	18.2	0.0	0.7	chr19	11191782	11192083	(47425533)	+	AluJo	SINE/Alu	7	306	(6)	1821702
29	26.9	4.1	2.4	chr19	11358542	11358709	(47258907)	+	(CCTTT)n	Simple_repeat	1	170	(0)	1822130
2205	12.4	0.0	0.0	chr19	11358713	11359003	(47258613)	C	AluSx1	SINE/Alu	(10)	302	12	1822131
2324	10.0	0.0	0.0	chr19	11581452	11581761	(47035855)	+	AluSz	SINE/Alu	3	312	(0)	1822710
337	33.0	6.7	7.9	chr19	11581762	11581910	(47035706)	+	L2a	LINE/L2	3151	3296	(130)	1822709
1634	18.5	3.5	1.3	chr19	11581924	11582226	(47035390)	C	AluJb	SINE/Alu	(2)	310	1	1822711
1160	16.1	5.6	1.9	chr19	12481720	12481924	(46135692)	+	AluJr4	SINE/Alu	84	296	(16)	1824513
49	4.9	1.9	8.6	chr19	12481925	12482027	(46135589)	+	A-rich	Low_complexity	1	105	(0)	1824514
685	16.4	0.0	0.0	chr19	12482034	12482137	(46135479)	+	AluJr	SINE/Alu	18	121	(191)	1824515
935	28.2	12.8	1.3	chr19	12773557	12774082	(45843534)	+	L2a	LINE/L2	2626	3256	(170)	1825186
808	26.8	3.1	4.4	chr19	12970135	12970427	(45647189)	+	L2	LINE/L2	2727	3015	(404)	1825667
651	15.2	7.5	0.9	chr19	12970433	12970544	(45647072)	C	FLAM_C	SINE/Alu	(10)	133	14	1825668
16	4.5	0.0	0.0	chr19	13057810	13057832	(45559784)	+	(CCCT)n	Simple_repeat	1	23	(0)	1825816
613	18.6	0.8	6.2	chr19	13157301	13157429	(45460187)	C	AluJb	SINE/Alu	(71)	241	120	1825993
38	8.3	2.9	2.8	chr19	13157430	13157498	(45460118)	+	(CTTT)n	Simple_repeat	1	71	(0)	1825994
1133	16.6	5.2	0.0	chr19	13157517	13157697	(45459919)	C	AluJr	SINE/Alu	(2)	310	120	1825995
1506	17.5	7.4	0.0	chr19	13547007	13547258	(45070358)	+	AluJr4	SINE/Alu	12	283	(29)	1827062
98	1.1	0.0	0.0	chr19	13547259	13547349	(45070267)	+	(AAAGG)n	Simple_repeat	1	91	(0)	1827063
1456	24.0	2.4	9.0	chr19	13547350	13547451	(45070165)	+	L1ME4b	LINE/L1	427	527	(365)	1827060
438	33.6	9.5	4.5	chr19	13604842	13605295	(45012321)	+	L1M4c	LINE/L1	947	1528	(1215)	1827246
755	24.4	0.0	0.0	chr19	13823838	13824005	(44793611)	C	MLT1B	LTR/ERVL-MaLR	(8)	382	215	1827903
67	15.6	6.2	1.2	chr19	13824031	13824190	(44793426)	+	GA-rich	Low_complexity	1	170	(0)	1827904
2409	11.2	0.0	0.0	chr19	13855208	13855518	(44762098)	+	AluSx	SINE/Alu	1	311	(1)	1827970
13	11.9	0.0	6.2	chr19	13855519	13855550	(44762066)	+	A-rich	Low_complexity	1	32	(0)	1827971
249	20.4	0.0	12.3	chr19	13855598	13855703	(44761913)	C	L1MB8	LINE/L1	(293)	5891	5799	1827965
1519	26.7	15.3	5.5	chr19	14145284	14146259	(44471357)	C	L2a	LINE/L2	(3)	3423	2313	1828696
28	28.5	3.3	0.0	chr19	14146260	14146350	(44471266)	+	(CTCT)n	Simple_repeat	1	94	(0)	1828697
2298	10.6	1.3	0.0	chr19	14146352	14146653	(44470963)	C	AluSg	SINE/Alu	(0)	310	5	1828698
120	19.4	4.0	3.9	chr19	15099136	15099482	(43518134)	+	GA-rich	Low_complexity	1	361	(0)	1831115
7514	13.9	5.8	2.6	chr19	15305343	15306291	(43311325)	C	Tigger1	DNA/TcMar-Tigger	(940)	1478	493	1831534
1876	14.6	0.4	1.4	chr19	15306292	15306571	(43311045)	C	AluJr	SINE/Alu	(35)	277	1	1831535
2476	8.7	0.7	0.0	chr19	16294463	16294772	(42322844)	+	AluSq	SINE/Alu	1	312	(1)	1833625
2988	27.5	8.3	5.8	chr19	16386449	16387227	(42230389)	+	L1MEf	LINE/L1	123	967	(5275)	1833835
1821	11.8	0.0	3.4	chr19	16387228	16387325	(42230291)	+	AluSx	SINE/Alu	47	144	(168)	1833836
2198	9.5	0.0	1.4	chr19	16443802	16444086	(42173530)	+	AluSx3	SINE/Alu	24	304	(7)	1833940
487	15.8	0.9	5.2	chr19	16776964	16778059	(41839557)	+	GA-rich	Low_complexity	1	1106	(0)	1834744
948	18.4	2.5	0.0	chr19	17538481	17538638	(41078978)	+	AluJr	SINE/Alu	141	302	(10)	1836639
312	28.7	8.2	1.0	chr19	17538644	17538745	(41078871)	+	L1MEd	LINE/L1	1979	2088	(4998)	1836640
23	20.3	1.4	5.4	chr19	17538747	17538819	(41078797)	+	GA-rich	Low_complexity	1	74	(0)	1836641
239	33.3	14.3	1.4	chr19	17538831	17538976	(41078640)	+	MER91A	DNA/hAT-Tip100	1	168	(28)	1836642
2431	8.7	0.3	0.0	chr19	17694990	17695299	(40922317)	+	AluY	SINE/Alu	1	311	(0)	1837029
79	25.4	1.5	4.5	chr19	17695300	17695557	(40922059)	+	A-rich	Low_complexity	6	256	(0)	1837030
67	15.8	3.5	4.4	chr19	17926970	17927143	(40690473)	+	A-rich	Low_complexity	1	180	(0)	1837642
20	7.2	0.0	0.0	chr19	18282216	18282245	(40335371)	+	(CCCT)n	Simple_repeat	1	30	(0)	1838530
311	26.9	6.3	2.5	chr19	18282357	18282478	(40335138)	C	MIR3	SINE/MIR	(52)	156	30	1838531
2154	14.1	0.0	0.3	chr19	18365338	18365643	(40251973)	C	AluJb	SINE/Alu	(7)	305	1	1838731
655	29.9	12.0	8.5	chr19	19440558	19440862	(39176754)	+	L1MC5a	LINE/L1	712	1048	(1729)	1840993
1074	7.9	0.0	0.0	chr19	19441071	19441209	(39176407)	C	AluSx1	SINE/Alu	(40)	272	134	1840996
339	33.8	5.6	3.2	chr19	19459178	19459333	(39158283)	C	L1ME4a	LINE/L1	(0)	6124	5965	1841036
146	0.6	3.6	4.0	chr19	19744104	19744295	(38873321)	+	(TTCCT)n	Simple_repeat	1	199	(0)	1841552
466	25.4	5.1	2.1	chr19	23322646	23324377	(35293239)	+	(CTC)n	Simple_repeat	1	1821	(0)	1846518
652	30.4	12.1	1.4	chr19	27792130	27792822	(30824794)	+	L1MEf	LINE/L1	482	1258	(4942)	1847923
242	31.6	13.2	5.0	chr19	28349666	28349825	(30267791)	C	MIRb	SINE/MIR	(34)	234	60	1848623
294	13.3	4.8	0.0	chr19	28349866	28349925	(30267691)	C	L1MC3	LINE/L1	(0)	7785	7723	1848624
1030	26.8	4.2	0.7	chr19	28349943	28350220	(30267396)	+	L1M3e	LINE/L1	461	748	(6741)	1848625
57	19.7	6.1	3.4	chr19	28982095	28982291	(29635325)	+	GA-rich	Low_complexity	1	209	(0)	1849542
657	17.8	3.7	0.1	chr19	29015377	29016739	(29600877)	+	(CT)n	Simple_repeat	1	1414	(0)	1849615
82	2.4	0.0	2.2	chr19	29039191	29039281	(29578335)	+	(CTTTC)n	Simple_repeat	1	91	(0)	1849655
2154	12.0	1.0	0.0	chr19	29039287	29039594	(29578022)	C	AluSx	SINE/Alu	(1)	311	1	1849656
92	14.3	1.1	2.2	chr19	29151713	29151878	(29465738)	+	A-rich	Low_complexity	1	164	(0)	1849824
35	2.5	2.4	0.0	chr19	29151879	29151919	(29465697)	+	(AAGG)n	Simple_repeat	1	42	(0)	1849825
268	17.9	2.9	0.0	chr19	29151965	29152031	(29465585)	+	L1MEb	LINE/L1	541	609	(5461)	1849822
251	32.1	3.5	9.7	chr19	29154195	29154318	(29463298)	+	LTR88b	LTR/Gypsy?	14	129	(708)	1849829
38	15.8	0.0	0.0	chr19	29154326	29154395	(29463221)	+	GA-rich	Low_complexity	1	70	(0)	1849830
559	15.6	18.7	0.7	chr19	29154444	29154579	(29463037)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	1849831
307	26.6	8.7	7.8	chr19	29241470	29241673	(29375943)	+	L1MEd	LINE/L1	974	1179	(5907)	1849955
191	27.6	0.6	0.0	chr19	29364952	29365462	(29252154)	+	(TCTCTC)n	Simple_repeat	1	514	(0)	1850123
234	28.8	0.0	2.7	chr19	29578372	29578446	(29039170)	C	MLT1O	LTR/ERVL-MaLR	(201)	341	269	1850430
53	21.0	0.9	0.0	chr19	29578498	29578611	(29039005)	+	(CTCT)n	Simple_repeat	1	115	(0)	1850432
18	0.0	0.0	0.0	chr19	29578620	29578639	(29038977)	+	(AG)n	Simple_repeat	1	20	(0)	1850433
307	23.4	2.5	0.0	chr19	29578640	29578716	(29038900)	C	MLT1O	LTR/ERVL-MaLR	(341)	201	123	1850430
798	24.9	18.5	0.6	chr19	29617976	29618294	(28999322)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	2	1850495
2858	17.4	7.3	2.2	chr19	29953378	29954013	(28663603)	C	Looper	DNA/PiggyBac	(881)	676	6	1851220
14	20.4	3.7	3.6	chr19	30391689	30391742	(28225874)	+	A-rich	Low_complexity	1	56	(0)	1851794
23	24.4	1.1	6.2	chr19	30666354	30666448	(27951168)	+	(TCCC)n	Simple_repeat	1	96	(0)	1852165
152	18.0	2.4	3.4	chr19	30699951	30700319	(27917297)	+	(TTTC)n	Simple_repeat	1	378	(0)	1852196
108	43.9	1.5	2.9	chr19	30815826	30816635	(27800981)	+	(TCTT)n	Simple_repeat	1	822	(0)	1852343
2010	13.9	5.5	0.0	chr19	30944464	30944636	(27672980)	+	AluJr	SINE/Alu	134	311	(1)	1852488
104	8.9	6.4	3.0	chr19	30944637	30944783	(27672833)	+	A-rich	Low_complexity	1	229	(0)	1852490
31	20.2	0.0	1.5	chr19	30944784	30944851	(27672765)	+	G-rich	Low_complexity	1	68	(0)	1852491
65	31.8	2.0	2.3	chr19	31073533	31073884	(27543732)	+	(CTCC)n	Simple_repeat	1	350	(0)	1852696
23	24.9	1.7	0.0	chr19	31316751	31316808	(27300808)	+	GA-rich	Low_complexity	1	59	(0)	1853038
311	21.8	7.5	2.2	chr19	31351142	31351230	(27266386)	C	L1M2	LINE/L1	(2958)	3185	3092	1853087
192	20.2	6.6	0.7	chr19	31611304	31611845	(27005771)	+	GA-rich	Low_complexity	1	578	(0)	1853502
120	27.0	4.0	3.0	chr19	32223030	32223508	(26394108)	+	GA-rich	Low_complexity	1	498	(0)	1854428
188	24.4	0.0	2.2	chr19	32346599	32346644	(26270972)	C	MamRTE1	LINE/RTE-BovB	(316)	3496	3452	1854640
162	8.8	0.0	6.1	chr19	32361630	32361924	(26255692)	+	(CTTC)n	Simple_repeat	1	295	(0)	1854659
76	31.8	1.7	4.3	chr19	32392102	32392447	(26225169)	+	G-rich	Low_complexity	1	352	(0)	1854706
806	27.3	9.2	2.1	chr19	32576569	32576950	(26040666)	+	HAL1ME	LINE/L1	1096	1507	(958)	1855078
19	23.4	7.4	1.1	chr19	32576951	32577031	(26040585)	+	(TTTCTC)n	Simple_repeat	1	87	(0)	1855079
50	5.6	0.0	0.0	chr19	32577043	32577098	(26040518)	+	(CT)n	Simple_repeat	1	56	(0)	1855080
1229	14.4	2.8	4.7	chr19	32577127	32577341	(26040275)	C	AluJr	SINE/Alu	(101)	211	1	1855081
10675	14.8	1.5	3.6	chr19	32894910	32897029	(25720587)	+	L1MA4A	LINE/L1	3418	5501	(802)	1855675
2461	9.6	0.3	0.0	chr19	33056100	33056411	(25561205)	C	AluSp	SINE/Alu	(0)	313	1	1856056
1653	16.2	8.7	0.3	chr19	33077757	33078039	(25539577)	+	AluJo	SINE/Alu	3	311	(1)	1856116
1384	17.2	13.2	8.8	chr19	33078040	33078314	(25539302)	C	LTR24	LTR/ERV1	(112)	355	28	1856115
195	27.5	5.7	3.6	chr19	33216471	33216575	(25401041)	+	L2b	LINE/L2	3068	3176	(211)	1856418
29	0.0	0.0	7.3	chr19	33216592	33216632	(25400984)	+	(TTTCC)n	Simple_repeat	1	41	(0)	1856422
1588	11.7	0.0	2.2	chr19	33216656	33216878	(25400738)	C	AluSz	SINE/Alu	(93)	219	2	1856423
531	26.6	12.8	1.7	chr19	33243846	33244273	(25373343)	+	L2a	LINE/L2	2830	3298	(128)	1856467
74	10.0	0.8	3.1	chr19	33244274	33244401	(25373215)	+	(TTTC)n	Simple_repeat	1	129	(0)	1856468
2034	14.7	0.0	4.3	chr19	33244403	33244728	(25372888)	C	AluJr	SINE/Alu	(0)	312	1	1856469
1245	28.3	16.2	1.6	chr19	34124148	34124703	(24492913)	C	L2	LINE/L2	(1362)	2057	1405	1857944
37	28.6	2.4	0.8	chr19	35031335	35031458	(23586158)	+	GA-rich	Low_complexity	1	127	(0)	1859553
423	32.0	11.6	0.9	chr19	35095542	35095765	(23521851)	+	L1MC4	LINE/L1	977	1227	(4988)	1859707
53	14.3	4.7	3.0	chr19	35095767	35095894	(23521722)	+	A-rich	Low_complexity	1	134	(0)	1859708
1604	27.4	10.2	2.0	chr19	35095897	35096593	(23521023)	C	L2	LINE/L2	(413)	3006	2246	1859709
31	22.3	4.8	4.9	chr19	35152594	35152735	(23464881)	+	GA-rich	Low_complexity	1	141	(0)	1859829
255	21.4	4.5	5.6	chr19	35509408	35509496	(23108120)	+	MER5A1	DNA/hAT-Charlie	41	128	(38)	1860570
374	28.1	2.4	0.0	chr19	35551915	35552035	(23065581)	C	MER102a	DNA/hAT-Charlie	(6)	324	201	1860641
115	25.7	3.8	1.9	chr19	35562774	35563184	(23054432)	+	(TCTC)n	Simple_repeat	1	418	(0)	1860656
55	12.1	5.8	2.2	chr19	35596066	35596206	(23021410)	+	A-rich	Low_complexity	1	146	(0)	1860728
1994	14.9	0.3	1.3	chr19	35647649	35647957	(22969659)	+	AluJr	SINE/Alu	1	306	(6)	1860840
318	18.3	1.9	16.1	chr19	35647958	35648020	(22969596)	+	L2a	LINE/L2	3371	3425	(1)	1860839
806	16.8	0.0	0.0	chr19	35655637	35655755	(22961861)	C	FLAM_A	SINE/Alu	(21)	121	3	1860862
54	11.1	1.0	1.0	chr19	35655756	35655854	(22961762)	+	(TC)n	Simple_repeat	1	100	(0)	1860863
1554	15.7	12.3	1.5	chr19	35655855	35656128	(22961488)	C	AluJo	SINE/Alu	(3)	309	2	1860864
718	6.7	0.0	8.7	chr19	35773358	35773472	(22844144)	+	L1MA2	LINE/L1	6200	6304	(0)	1861119
483	28.1	3.6	8.3	chr19	35773583	35773666	(22843950)	+	L2a	LINE/L2	3174	3255	(171)	1861105
1878	14.7	0.0	4.2	chr19	35818691	35818996	(22798620)	C	AluJo	SINE/Alu	(9)	303	11	1861229
918	30.0	4.8	4.0	chr19	36047958	36048257	(22569359)	+	MLT1I	LTR/ERVL-MaLR	31	340	(71)	1861759
757	33.1	10.8	4.5	chr19	36070670	36070925	(22546691)	C	Kanga11a	DNA/TcMar-Tc2	(439)	531	244	1861806
1908	0.5	0.5	0.0	chr19	36524518	36524730	(22092886)	C	SVA_E	Retroposon/SVA	(3)	1379	1166	1862721
1731	16.4	4.1	1.1	chr19	36577495	36577780	(22039836)	C	AluJo	SINE/Alu	(16)	296	2	1862821
1574	11.2	7.8	0.9	chr19	36614645	36614859	(22002757)	+	AluSx	SINE/Alu	1	231	(81)	1862891
78	2.2	0.0	5.0	chr19	36614881	36614981	(22002635)	+	(TTCCT)n	Simple_repeat	1	101	(0)	1862892
1659	15.3	11.6	22.1	chr19	36771094	36771715	(21845901)	C	LTR25	LTR/ERV1	(64)	780	356	1863212
711	18.1	11.3	3.1	chr19	36850413	36850663	(21766953)	C	MER31B	LTR/ERV1	(74)	392	1	1863383
526	17.9	3.2	1.2	chr19	37330125	37330271	(21287345)	C	L1MA7	LINE/L1	(1)	6296	6145	1864249
32	23.7	8.3	0.7	chr19	37706202	37706334	(20911282)	+	GA-rich	Low_complexity	1	144	(0)	1864936
75	30.1	0.8	2.0	chr19	37886567	37886818	(20730798)	+	(CTC)n	Simple_repeat	1	254	(0)	1865304
11	30.3	0.0	3.6	chr19	37888499	37888554	(20729062)	+	(TTTCTCT)n	Simple_repeat	1	56	(0)	1865306
2052	12.8	0.0	0.0	chr19	38050778	38051073	(20566543)	+	AluSz6	SINE/Alu	2	297	(15)	1865712
365	34.1	5.2	1.3	chr19	38165235	38165454	(20452162)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	292	1866001
200	21.1	13.6	0.0	chr19	38267287	38267343	(20350273)	C	L2a	LINE/L2	(1883)	1536	1471	1866265
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
2276	12.5	0.0	0.0	chr19	38342323	38342626	(20274990)	+	AluSz	SINE/Alu	6	309	(3)	1866454
2290	11.0	0.3	0.3	chr19	38654281	38654588	(19963028)	+	AluSx	SINE/Alu	2	309	(3)	1867193
212	35.3	2.3	1.2	chr19	38671154	38671239	(19946377)	+	Tigger19a	DNA/TcMar-Tigger	236	322	(1)	1867215
688	14.4	0.0	0.0	chr19	38898688	38898784	(19718832)	C	AluJo	SINE/Alu	(215)	97	1	1867704
862	10.7	0.8	0.8	chr19	38898794	38898914	(19718702)	C	AluJo	SINE/Alu	(8)	304	184	1867705
2522	14.9	2.6	4.1	chr19	39033501	39033905	(19583711)	+	MER65C	LTR/ERV1	1	414	(47)	1868057
1682	19.5	1.3	1.6	chr19	39146556	39146862	(19470754)	+	AluJb	SINE/Alu	1	306	(6)	1868386
619	30.3	3.9	10.8	chr19	39146863	39146925	(19470691)	C	L2b	LINE/L2	(381)	2994	2931	1868384
3640	17.8	6.6	2.6	chr19	39146945	39147053	(19470563)	C	L1MD1	LINE/L1	(53)	6189	6082	1868387
53	25.8	1.9	1.9	chr19	39229996	39230152	(19387464)	+	G-rich	Low_complexity	1	160	(0)	1868606
87	0.0	0.0	0.0	chr19	39230153	39230229	(19387387)	+	(AAGGA)n	Simple_repeat	1	77	(0)	1868607
1153	26.3	7.8	1.9	chr19	39305832	39306375	(19311241)	+	LTR48B	LTR/ERV1	1	644	(0)	1868804
557	24.0	17.6	2.0	chr19	39306381	39306576	(19311040)	+	MIR	SINE/MIR	29	261	(1)	1868805
812	27.5	19.7	1.7	chr19	39339786	39340027	(19277589)	+	L2a	LINE/L2	2925	3215	(211)	1868884
2108	14.7	0.3	0.3	chr19	39340028	39340339	(19277277)	C	AluSz6	SINE/Alu	(0)	312	1	1868892
13	23.1	3.7	3.6	chr19	39386351	39386365	(19231251)	+	(CTC)n	Simple_repeat	1	52	(0)	1868978
16	9.7	2.9	2.8	chr19	39386366	39386400	(19231216)	+	(CTCCTG)n	Simple_repeat	1	36	(0)	1868979
14	16.2	0.0	0.0	chr19	39386500	39386537	(19231079)	+	(CTC)n	Simple_repeat	1	38	(0)	1868980
658	16.8	21.8	0.0	chr19	39430840	39431000	(19186616)	C	MER6B	DNA/TcMar-Tigger	(4)	206	1	1869051
2195	10.0	0.0	1.9	chr19	39551183	39551493	(19066123)	+	AluSz	SINE/Alu	2	306	(6)	1869338
1915	12.5	3.0	1.4	chr19	39551697	39551993	(19065623)	C	AluJb	SINE/Alu	(0)	312	11	1869339
2319	10.5	1.6	0.0	chr19	40161117	40161422	(18456194)	+	AluSx1	SINE/Alu	1	311	(1)	1870356
44	4.7	4.5	0.0	chr19	40161432	40161498	(18456118)	+	(AAGGGA)n	Simple_repeat	1	70	(0)	1870357
2108	11.4	0.0	8.5	chr19	40218889	40219229	(18398387)	+	AluSz	SINE/Alu	1	312	(0)	1870517
49	5.3	3.5	3.4	chr19	40219230	40219314	(18398302)	+	(AGGAA)n	Simple_repeat	1	88	(0)	1870518
187	37.0	0.0	1.4	chr19	40219654	40219727	(18397889)	C	L2b	LINE/L2	(78)	3297	3225	1870520
453	33.0	4.9	0.9	chr19	40219783	40219999	(18397617)	+	MIR	SINE/MIR	36	261	(1)	1870521
1502	21.5	16.0	1.3	chr19	40229389	40229935	(18387681)	C	L1MC3	LINE/L1	(67)	7718	7076	1870542
258	30.1	1.8	7.9	chr19	40347555	40347646	(18269970)	+	MER113	DNA/hAT-Charlie	373	456	(65)	1870833
415	32.9	5.8	2.3	chr19	40347811	40348025	(18269591)	C	MIRb	SINE/MIR	(22)	246	24	1870835
1600	26.9	13.0	1.1	chr19	40399049	40399712	(18217904)	+	L2a	LINE/L2	1459	2213	(1206)	1870949
782	20.0	3.0	0.0	chr19	40399713	40399842	(18217774)	C	FLAM_C	SINE/Alu	(8)	135	2	1870950
83	5.8	3.9	1.5	chr19	40399843	40399972	(18217644)	+	(TTTC)n	Simple_repeat	1	135	(0)	1870951
188	23.7	7.0	3.1	chr19	40444957	40445052	(18172564)	+	L2a	LINE/L2	2821	2920	(499)	1871079
302	22.7	1.3	3.9	chr19	40445156	40445233	(18172383)	+	L2a	LINE/L2	3327	3402	(24)	1871079
133	18.7	6.4	0.0	chr19	40494439	40494783	(18122833)	+	(CTAT)n	Simple_repeat	1	367	(0)	1871232
13	12.9	6.5	4.1	chr19	40627377	40627422	(17990194)	+	(TGAGGAG)n	Simple_repeat	1	49	(0)	1871544
320	31.4	8.5	0.6	chr19	40646985	40647157	(17970459)	C	MLT1L	LTR/ERVL-MaLR	(24)	586	384	1871607
1151	13.1	1.0	2.5	chr19	40647172	40647367	(17970249)	C	AluSx	SINE/Alu	(0)	312	120	1871608
30	0.0	0.0	0.0	chr19	40715846	40715871	(17901745)	+	(TG)n	Simple_repeat	1	26	(0)	1871775
78	22.0	2.5	1.9	chr19	40838607	40838808	(17778808)	+	(TTCC)n	Simple_repeat	1	207	(0)	1872064
2189	12.8	0.0	0.3	chr19	40838809	40839114	(17778502)	C	AluJb	SINE/Alu	(0)	312	1	1872065
14	29.9	4.3	0.0	chr19	41014741	41014809	(17602807)	+	(CAGA)n	Simple_repeat	1	72	(0)	1872429
58	17.4	3.3	2.4	chr19	41379536	41379717	(17237899)	+	GA-rich	Low_complexity	1	183	(0)	1873302
428	23.9	7.0	3.6	chr19	41379718	41379884	(17237732)	C	MLT1G	LTR/ERVL-MaLR	(56)	513	294	1873303
37	14.4	2.1	5.0	chr19	41399635	41399660	(17217956)	+	(CTTTT)n	Simple_repeat	1	25	(0)	1873349
27	3.1	0.0	2.9	chr19	41399661	41399695	(17217921)	+	(TCCTC)n	Simple_repeat	1	35	(0)	1873350
37	14.4	2.1	5.0	chr19	41399696	41399765	(17217851)	+	(CTTTT)n	Simple_repeat	1	68	(0)	1873351
1996	14.6	5.5	0.0	chr19	41399775	41400068	(17217548)	C	AluSz	SINE/Alu	(1)	311	1	1873352
22	24.1	2.8	1.4	chr19	41882509	41882579	(16735037)	+	GA-rich	Low_complexity	1	73	(0)	1874116
16	22.6	0.0	0.0	chr19	41882636	41882676	(16734940)	+	(GACAGA)n	Simple_repeat	1	41	(0)	1874117
67	26.0	5.0	3.7	chr19	42154216	42154552	(16463064)	+	(AGAGAC)n	Simple_repeat	1	354	(0)	1874692
14	8.4	15.4	1.7	chr19	42176474	42176525	(16441091)	+	(CTCCG)n	Simple_repeat	1	60	(0)	1874736
105	17.4	1.9	4.5	chr19	42188697	42188955	(16428661)	+	GA-rich	Low_complexity	1	264	(0)	1874765
2400	10.7	0.0	0.0	chr19	42194480	42194788	(16422828)	+	AluSx	SINE/Alu	4	312	(0)	1874778
403	35.2	3.4	3.2	chr19	42194789	42194821	(16422795)	+	L1ME3B	LINE/L1	6063	6095	(1787)	1874774
178	19.6	0.6	1.1	chr19	42194822	42195184	(16422432)	+	G-rich	Low_complexity	1	365	(0)	1874779
1376	20.3	0.3	3.3	chr19	43318788	43319039	(15298577)	+	LTR49-int	LTR/ERV1	1042	1286	(5045)	1876505
3820	10.8	0.4	0.0	chr19	43319040	43319558	(15298058)	C	MER41C	LTR/ERV1	(0)	521	1	1876506
2191	11.0	1.0	0.0	chr19	43420771	43421061	(15196555)	+	AluSq2	SINE/Alu	1	294	(19)	1876700
3166	15.3	11.4	5.4	chr19	43421062	43421267	(15196349)	+	MER4CL34	LTR/ERV1	449	648	(117)	1876699
2442	8.2	0.7	0.3	chr19	43421268	43421573	(15196043)	+	AluSq	SINE/Alu	1	307	(6)	1876701
1763	17.3	0.3	2.3	chr19	43425302	43425602	(15192014)	+	AluJo	SINE/Alu	1	295	(17)	1876714
40	23.9	1.9	0.9	chr19	43425607	43425714	(15191902)	+	GA-rich	Low_complexity	1	110	(0)	1876715
408	28.6	6.0	4.8	chr19	43425780	43425926	(15191690)	C	L2a	LINE/L2	(586)	2833	2685	1876713
13	27.3	3.5	1.7	chr19	43456019	43456075	(15161541)	+	(CCCTCT)n	Simple_repeat	1	59	(0)	1876816
51	2.1	0.0	0.0	chr19	43456148	43456195	(15161421)	+	(TG)n	Simple_repeat	1	48	(0)	1876817
326	32.4	7.0	9.4	chr19	43505303	43505419	(15112197)	C	MIR	SINE/MIR	(3)	259	152	1876958
889	15.8	0.0	0.0	chr19	43505420	43505552	(15112064)	C	FLAM_C	SINE/Alu	(10)	133	1	1876959
27	8.2	0.0	0.0	chr19	43551757	43551795	(15065821)	+	(AGAC)n	Simple_repeat	1	39	(0)	1877080
13	19.1	0.0	0.0	chr19	43551889	43551918	(15065698)	+	GA-rich	Low_complexity	1	30	(0)	1877081
1011	27.6	7.0	2.6	chr19	43646380	43646691	(14970925)	C	MLT1G	LTR/ERVL-MaLR	(213)	378	52	1877305
2231	11.1	0.3	0.7	chr19	43702759	43703065	(14914551)	C	AluSz	SINE/Alu	(6)	306	1	1877476
263	23.1	3.6	8.5	chr19	43703178	43703295	(14914321)	C	L1MC5a	LINE/L1	(108)	2669	2558	1877477
288	35.1	2.0	3.9	chr19	43745074	43745227	(14872389)	C	L2b	LINE/L2	(307)	3068	2918	1877577
275	35.3	3.8	4.3	chr19	44003235	44003444	(14614172)	+	MIRb	SINE/MIR	28	236	(26)	1878041
342	28.8	16.2	0.0	chr19	44003852	44004021	(14613595)	C	MIR	SINE/MIR	(46)	216	14	1878042
426	24.7	13.2	0.0	chr19	44093746	44093935	(14523681)	+	L1MC5a	LINE/L1	1	219	(2558)	1878198
5948	20.2	5.5	4.2	chr19	44190635	44192284	(14425332)	C	MER65-int	LTR/ERV1	(1287)	4069	2693	1878343
26	14.3	5.6	0.0	chr19	44192287	44192340	(14425276)	+	GA-rich	Low_complexity	1	57	(0)	1878345
279	17.0	0.0	0.0	chr19	44192341	44192393	(14425223)	C	MER65-int	LTR/ERV1	(3787)	2852	2800	1878343
491	31.2	9.7	7.5	chr19	44508983	44509848	(14107768)	+	L1MC4	LINE/L1	831	1538	(1119)	1878847
957	21.1	23.8	7.0	chr19	44588556	44589012	(14028604)	+	MLT1F2	LTR/ERVL-MaLR	28	560	(0)	1879055
43	0.0	4.5	0.0	chr19	44677433	44677476	(13940140)	+	(GA)n	Simple_repeat	1	46	(0)	1879306
198	34.5	9.8	2.9	chr19	44677495	44677664	(13939952)	C	L3	LINE/CR1	(176)	3923	3741	1879307
19	4.0	0.0	0.0	chr19	44799646	44799671	(13817945)	+	(TTG)n	Simple_repeat	1	26	(0)	1879662
86	18.9	2.1	4.6	chr19	44799672	44799904	(13817712)	+	GA-rich	Low_complexity	1	238	(0)	1879663
56	25.0	4.0	1.1	chr19	44848657	44848829	(13768787)	+	(CT)n	Simple_repeat	1	180	(0)	1879792
332	31.9	1.1	0.0	chr19	45250422	45250512	(13367104)	C	MIRc	SINE/MIR	(96)	172	81	1880812
813	24.2	13.1	1.2	chr19	45391471	45391813	(13225803)	+	MLT1J	LTR/ERVL-MaLR	82	471	(41)	1881183
1358	13.8	0.9	4.0	chr19	46131962	46132076	(12485540)	C	MER75B	DNA/PiggyBac	(126)	117	1	1882993
1939	24.9	11.6	9.5	chr19	46132077	46133206	(12484410)	C	HERV35I-int	LTR/ERV1	(5736)	1182	26	1882995
164	2.3	2.8	0.0	chr19	46243275	46243451	(12374165)	+	(TTTCC)n	Simple_repeat	1	182	(0)	1883183
2053	11.6	5.2	0.0	chr19	46243460	46243751	(12373865)	C	AluSq2	SINE/Alu	(0)	313	6	1883184
784	18.7	10.5	0.7	chr19	46408861	46409015	(12208601)	+	AluJb	SINE/Alu	140	311	(1)	1883589
103	16.9	4.1	2.3	chr19	46409038	46409283	(12208333)	+	G-rich	Low_complexity	1	256	(0)	1883590
679	20.0	9.1	0.6	chr19	46487733	46487903	(12129713)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	1883806
709	21.9	6.6	0.0	chr19	46546366	46546534	(12071082)	+	MER5A	DNA/hAT-Charlie	9	189	(0)	1883968
419	29.0	0.0	7.1	chr19	46546647	46546787	(12070829)	C	MLT1J2	LTR/ERVL-MaLR	(289)	159	29	1883967
12414	12.2	4.9	4.9	chr19	46882853	46883098	(11734518)	C	Tigger1	DNA/TcMar-Tigger	(1776)	642	413	1884806
2282	9.3	0.0	2.0	chr19	46883099	46883400	(11734216)	C	AluSx	SINE/Alu	(16)	296	1	1884823
2358	14.4	4.2	2.9	chr19	46916974	46917325	(11700291)	C	L1MB2	LINE/L1	(0)	6171	5809	1884892
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
12	21.8	2.7	0.0	chr19	47113254	47113290	(11504326)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	1885281
2298	10.2	0.0	0.0	chr19	47233077	47233371	(11384245)	C	AluSx4	SINE/Alu	(14)	296	2	1885604
1136	22.8	0.0	0.9	chr19	47253390	47253600	(11364016)	C	AluJr	SINE/Alu	(97)	215	7	1885671
2398	7.7	0.7	0.0	chr19	47350421	47350719	(11266897)	C	AluSp	SINE/Alu	(12)	301	1	1885948
439	25.1	5.0	5.0	chr19	47427349	47427570	(11190046)	+	LTR33	LTR/ERVL	280	501	(14)	1886141
284	32.2	12.2	5.3	chr19	47427626	47427907	(11189709)	+	L2	LINE/L2	2658	2961	(458)	1886142
34	0.0	0.0	0.0	chr19	47490647	47490678	(11126938)	+	(AAACA)n	Simple_repeat	1	32	(0)	1886284
306	26.9	0.6	19.7	chr19	47634531	47634748	(10982868)	+	L2a	LINE/L2	2414	2589	(830)	1886640
397	31.3	11.3	5.7	chr19	47728189	47728557	(10889059)	+	L2a	LINE/L2	2939	3306	(120)	1886898
2521	8.3	0.0	0.3	chr19	47728558	47728869	(10888747)	C	AluSx	SINE/Alu	(1)	311	1	1886899
4238	11.4	5.7	3.4	chr19	48107461	48108186	(10509430)	+	LTR13	LTR/ERVK	261	1003	(4)	1887964
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
2241	13.2	0.3	0.0	chr19	48388405	48388714	(10228902)	+	AluSx1	SINE/Alu	2	312	(0)	1888641
122	17.8	0.8	1.2	chr19	48388716	48388954	(10228662)	+	GA-rich	Low_complexity	1	241	(0)	1888642
255	26.9	15.4	0.0	chr19	48437742	48437845	(10179771)	C	LTR85b	LTR/Gypsy?	(633)	151	29	1888767
1141	24.1	4.7	2.6	chr19	48445205	48445589	(10172027)	C	LTR82A	LTR/ERVL	(433)	439	1	1888784
1126	12.9	17.4	8.9	chr19	48860516	48860786	(9756830)	+	AluJo	SINE/Alu	1	299	(13)	1889805
43	18.4	1.5	6.7	chr19	48860789	48860922	(9756694)	+	A-rich	Low_complexity	1	127	(0)	1889806
2427	8.4	0.0	0.3	chr19	48860925	48861233	(9756383)	+	AluSx	SINE/Alu	1	308	(4)	1889807
1540	16.0	10.8	2.9	chr19	49164926	49165042	(9452574)	C	AluJb	SINE/Alu	(194)	118	1	1890506
755	23.9	8.9	5.8	chr19	49165173	49165519	(9452097)	C	MER113	DNA/hAT-Charlie	(160)	361	3	1890508
31	29.9	4.2	2.3	chr19	49423747	49423913	(9193703)	+	GA-rich	Low_complexity	1	174	(0)	1891076
874	25.1	8.6	8.8	chr19	49546772	49547107	(9070509)	C	L1MEb	LINE/L1	(5684)	386	44	1891361
2263	9.2	0.0	5.2	chr19	49723906	49724233	(8893383)	+	AluY	SINE/Alu	1	311	(0)	1891781
1138	14.4	0.0	0.6	chr19	49724234	49724245	(8893371)	+	AluSx3	SINE/Alu	296	307	(4)	1891780
911	12.8	16.1	2.1	chr19	49724251	49724442	(8893174)	+	MER41E	LTR/ERV1	372	595	(0)	1891782
2383	9.8	0.0	1.6	chr19	49762412	49762726	(8854890)	C	AluSg	SINE/Alu	(0)	310	1	1891882
288	26.2	5.0	0.2	chr19	49766133	49766271	(8851345)	+	MIRc	SINE/MIR	60	199	(31)	1891890
2087	7.7	0.3	12.4	chr19	49886798	49887136	(8730480)	C	AluSx	SINE/Alu	(14)	298	1	1892137
419	25.7	4.0	1.0	chr19	49928549	49928701	(8688915)	C	MIRb	SINE/MIR	(32)	236	78	1892227
1976	14.8	2.6	1.3	chr19	50495604	50495739	(8121877)	+	AluJo	SINE/Alu	1	136	(176)	1893645
194	27.3	0.0	2.2	chr19	50496257	50496301	(8121315)	+	L2b	LINE/L2	3332	3375	(12)	1893644
1209	20.9	1.6	0.4	chr19	50497347	50500000	(8117616)	+	GA-rich	Low_complexity	1	2697	(0)	1893650
917	15.4	18.0	1.8	chr19	50662955	50663172	(7954444)	C	MIR	SINE/MIR	(0)	262	2	1894040
36	24.6	4.0	2.3	chr19	50663199	50663323	(7954293)	+	GA-rich	Low_complexity	1	130	(0)	1894041
312	30.9	9.2	3.9	chr19	50663374	50663712	(7953904)	+	L2a	LINE/L2	3021	3374	(1)	1894042
34	0.0	0.0	0.0	chr19	50774455	50774483	(7843133)	+	(AG)n	Simple_repeat	1	29	(0)	1894311
2205	10.3	0.3	0.7	chr19	50774674	50774983	(7842633)	C	AluSx1	SINE/Alu	(1)	311	3	1894312
35	16.6	1.4	1.4	chr19	50910907	50910975	(7706641)	+	GA-rich	Low_complexity	1	70	(0)	1894572
2452	8.5	0.3	0.0	chr19	50923151	50923455	(7694161)	+	AluSp	SINE/Alu	1	306	(7)	1894607
397	32.7	4.0	0.6	chr19	50923659	50923827	(7693789)	C	MIR	SINE/MIR	(2)	260	86	1894608
64	25.6	4.1	1.7	chr19	50931063	50931157	(7686459)	+	(CT)n	Simple_repeat	1	121	(109)	1894631
12	21.1	0.0	4.8	chr19	50931158	50931199	(7686417)	+	(TCCTCCC)n	Simple_repeat	1	42	(0)	1894632
64	25.6	4.1	1.7	chr19	50931200	50931283	(7686333)	+	(CT)n	Simple_repeat	122	230	(0)	1894631
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
37	19.4	8.3	2.9	chr19	52397426	52397582	(6220034)	+	(CTTCT)n	Simple_repeat	1	170	(0)	1897382
2143	9.4	4.8	2.9	chr19	53949232	53949538	(4668078)	+	AluSq	SINE/Alu	1	313	(0)	1900649
550	23.0	6.8	15.7	chr19	53949640	53949713	(4667903)	+	MER20	DNA/hAT-Charlie	1	54	(165)	1900650
2572	5.8	0.0	0.0	chr19	53949714	53950021	(4667595)	C	AluY	SINE/Alu	(2)	309	2	1900651
128	22.6	1.6	4.0	chr19	55199637	55200003	(3417613)	+	GA-rich	Low_complexity	1	373	(0)	1903211
1644	15.4	1.5	4.3	chr19	55501932	55502210	(3115406)	C	AluJb	SINE/Alu	(41)	271	1	1903856
308	31.8	10.2	5.1	chr19	55502211	55502525	(3115091)	C	L1MEd	LINE/L1	(5921)	1165	832	1903855
545	34.4	4.6	0.3	chr19	57279572	57279886	(1337730)	+	L2a	LINE/L2	2201	2529	(890)	1907552
769	15.7	0.0	0.2	chr19	57287484	57287611	(1330005)	C	AluJb	SINE/Alu	(175)	127	12	1907569
415	29.7	4.5	0.0	chr19	57287617	57287744	(1329872)	C	L1ME3	LINE/L1	(550)	5614	5481	1907567
1893	12.8	1.5	0.0	chr19	57287747	57288012	(1329604)	+	AluSx1	SINE/Alu	37	306	(6)	1907570
68	14.8	5.7	1.2	chr19	57961859	57962016	(655600)	+	(CTTTCT)n	Simple_repeat	1	165	(0)	1908614
1716	19.2	0.3	2.5	chr19	57962019	57962336	(655280)	C	AluJo	SINE/Alu	(1)	311	1	1908615
141	4.8	0.0	12.9	chr2	3336824	3337164	(238856365)	+	G-rich	Low_complexity	1	341	(0)	1914329
111	10.1	3.4	2.4	chr2	6833086	6833289	(235360240)	+	A-rich	Low_complexity	1	211	(0)	1919092
15	20.7	6.8	3.9	chr2	9654684	9654756	(232538773)	+	(CTTCT)n	Simple_repeat	1	78	(0)	1923372
625	28.6	11.1	9.8	chr2	9654839	9655041	(232538488)	+	L3	LINE/CR1	3605	3813	(286)	1923373
2205	8.9	0.0	9.2	chr2	10232810	10233147	(231960382)	+	AluSc	SINE/Alu	3	309	(0)	1924436
238	32.6	2.0	0.1	chr2	10233189	10234101	(231959428)	+	(TGTG)n	Simple_repeat	1	930	(0)	1924437
31	6.2	1.8	3.6	chr2	10480296	10480350	(231713179)	+	(CCTT)n	Simple_repeat	1	56	(0)	1924837
18	14.7	6.2	0.0	chr2	10480351	10480366	(231713163)	+	(TCTC)n	Simple_repeat	3	18	(0)	1924838
443	33.6	8.0	2.7	chr2	10480367	10480830	(231712699)	C	L1MC4	LINE/L1	(1206)	1369	948	1924839
3206	23.9	7.2	4.7	chr2	19500010	19501341	(222692188)	C	Charlie9	DNA/hAT-Charlie	(484)	2273	905	1938896
862	23.0	4.5	2.5	chr2	19900691	19900975	(222292554)	+	L1MC5	LINE/L1	8576	8830	(474)	1939443
12	25.8	0.0	2.3	chr2	24401615	24401657	(217791872)	+	(TCTTCAC)n	Simple_repeat	1	43	(0)	1946046
640	28.2	3.3	6.0	chr2	25309588	25309771	(216883758)	+	MIR	SINE/MIR	20	195	(67)	1947701
1645	15.2	7.3	0.3	chr2	25948273	25948554	(216244975)	+	AluJo	SINE/Alu	1	303	(9)	1948954
65	25.3	0.5	5.2	chr2	25948557	25948768	(216244761)	+	GA-rich	Low_complexity	1	213	(0)	1948955
7990	11.7	4.9	1.4	chr2	26298404	26299683	(215893846)	+	HERV15-int	LTR/ERV1	1	1268	(7467)	1949706
1952	17.0	0.3	0.7	chr2	26355746	26356039	(215837490)	C	AluJb	SINE/Alu	(17)	295	3	1949813
336	23.1	15.9	5.1	chr2	26935300	26935405	(215258124)	C	LTR78B	LTR/ERV1	(9)	1287	1168	1950916
200	24.0	10.7	4.8	chr2	27009588	27009692	(215183837)	+	L2b	LINE/L2	2841	2952	(467)	1951042
191	38.4	7.5	6.2	chr2	27009756	27010030	(215183499)	+	L2b	LINE/L2	3070	3348	(27)	1951042
216	32.3	16.8	1.5	chr2	27351926	27352267	(214841262)	+	L2	LINE/L2	879	1283	(2136)	1951646
283	31.7	4.2	6.5	chr2	27704258	27704403	(214489126)	C	MIR3	SINE/MIR	(4)	264	126	1952304
23	29.1	0.0	3.8	chr2	28695221	28695303	(213498226)	+	A-rich	Low_complexity	1	79	(0)	1954025
1014	28.1	10.5	7.6	chr2	32427609	32428508	(209765021)	C	L1M4a1	LINE/L1	(1399)	1180	251	1960299
315	29.3	0.0	0.0	chr2	32428504	32428578	(209764951)	C	L1M4a2	LINE/L1	(2573)	83	9	1960289
207	36.3	13.7	3.6	chr2	32807830	32807928	(209385601)	+	L2	LINE/L2	2098	2208	(1211)	1960991
2339	10.1	0.3	0.7	chr2	32807929	32808234	(209385295)	C	AluSq	SINE/Alu	(8)	305	1	1960992
37	30.0	3.6	5.8	chr2	32942386	32942666	(209250863)	+	(TTCTCC)n	Simple_repeat	1	291	(0)	1961234
677	22.2	7.0	10.4	chr2	36771122	36771248	(205422281)	+	L1M5	LINE/L1	5279	5384	(740)	1966500
15	8.3	0.0	3.6	chr2	37325734	37325761	(204867768)	+	(TTTC)n	Simple_repeat	1	28	(0)	1967539
1904	15.8	2.0	1.6	chr2	37325767	37326070	(204867459)	C	AluJr	SINE/Alu	(7)	305	1	1967540
266	28.8	3.9	1.4	chr2	37336968	37337041	(204856488)	+	MIR	SINE/MIR	82	157	(105)	1967565
861	27.2	10.9	3.3	chr2	37969079	37969841	(204223688)	C	L1M5	LINE/L1	(1331)	4815	3975	1968516
22	28.6	3.1	3.0	chr2	37969843	37969951	(204223578)	+	(CCTT)n	Simple_repeat	1	109	(0)	1968517
1518	18.8	2.4	0.0	chr2	37969954	37970198	(204223331)	C	AluJb	SINE/Alu	(33)	279	29	1968518
1846	23.1	6.8	1.2	chr2	39107197	39107626	(203085903)	+	LTR16B2	LTR/ERVL	7	462	(0)	1970556
676	28.6	10.6	0.0	chr2	40376278	40376539	(201816990)	C	LTR82B	LTR/ERVL	(7)	823	531	1972489
26	2.5	4.7	2.2	chr2	40376568	40376610	(201816919)	+	(AAAGGA)n	Simple_repeat	1	45	(0)	1972490
475	30.0	11.6	2.2	chr2	40376611	40376907	(201816622)	C	LTR82B	LTR/ERVL	(290)	540	233	1972489
60	12.5	3.1	7.1	chr2	41659868	41660030	(200533499)	+	A-rich	Low_complexity	1	168	(0)	1974217
324	33.3	5.6	1.5	chr2	41660033	41660169	(200533360)	+	L1MEd	LINE/L1	87	229	(6857)	1974218
3748	16.3	10.2	2.2	chr2	42309448	42310221	(199883308)	C	L1MB7	LINE/L1	(587)	5597	4769	1975317
62	11.3	0.0	1.0	chr2	42310264	42310363	(199883166)	+	(CTTCCC)n	Simple_repeat	1	100	(0)	1975319
2073	13.6	0.0	0.4	chr2	42310367	42310645	(199882884)	C	AluSz	SINE/Alu	(34)	278	1	1975320
356	31.7	14.0	2.2	chr2	44152943	44153168	(198040361)	C	LTR78	LTR/ERV1	(919)	385	129	1978697
56	54.2	0.0	0.0	chr2	45154614	45155015	(197038514)	+	(TTTT)n	Simple_repeat	1	402	(0)	1980313
250	24.1	2.3	1.5	chr2	45459456	45459523	(196734006)	+	L3b	LINE/CR1	4038	4095	(4)	1980742
612	27.1	6.2	11.7	chr2	45628872	45629197	(196564332)	C	MLT1L	LTR/ERVL-MaLR	(299)	311	5	1980995
314	24.3	16.6	3.0	chr2	46701386	46701547	(195491982)	C	MIR3	SINE/MIR	(23)	185	3	1982669
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
18	14.2	10.6	0.0	chr2	47906280	47906326	(194287203)	+	(TC)n	Simple_repeat	1	52	(0)	1985046
70	1.1	3.9	4.7	chr2	49465178	49465280	(192728249)	+	(TTCC)n	Simple_repeat	1	107	(0)	1987475
1032	13.2	5.1	1.0	chr2	49465281	49465318	(192728211)	C	L1M1	LINE/L1	(4061)	3504	3461	1987474
93	11.9	0.0	4.1	chr2	49465332	49465503	(192728026)	+	(CCCTTT)n	Simple_repeat	1	172	(0)	1987476
5976	12.7	4.8	1.4	chr2	49465504	49466587	(192726942)	C	L1M1	LINE/L1	(4068)	3497	2375	1987474
247	29.2	2.7	7.7	chr2	53964345	53964403	(188229126)	+	Tigger18a	DNA/TcMar-Tigger	542	592	(260)	1993458
188	20.5	0.0	0.0	chr2	55051353	55051391	(187142138)	+	UCON80_AMi	Unknown	72	110	(112)	1995183
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
4857	14.6	4.0	4.7	chr2	55435722	55436302	(186757227)	C	Tigger1	DNA/TcMar-Tigger	(1237)	1181	593	1995899
1804	18.9	0.3	0.7	chr2	55436303	55436608	(186756921)	+	AluJb	SINE/Alu	7	311	(1)	1995902
18108	15.4	4.3	2.3	chr2	56007305	56008260	(186185269)	C	L1MC1	LINE/L1	(3868)	2453	1476	1996866
293	33.2	7.7	3.5	chr2	59080667	59080866	(183112663)	C	MIRb	SINE/MIR	(37)	231	19	2000641
51	29.7	4.1	0.5	chr2	59080889	59081082	(183112447)	+	GA-rich	Low_complexity	1	202	(0)	2000642
22	8.3	2.5	0.0	chr2	60389001	60389033	(181804496)	+	(GGAGA)n	Simple_repeat	1	34	(0)	2002387
202	1.1	0.0	0.0	chr2	60389034	60389216	(181804313)	+	(AGGAA)n	Simple_repeat	1	183	(0)	2002388
189	26.1	12.4	6.1	chr2	60515266	60515363	(181678166)	C	Tigger19b	DNA/TcMar-Tigger	(321)	229	125	2002539
15	4.9	0.0	0.0	chr2	61283565	61283574	(180909955)	+	(GT)n	Simple_repeat	1	10	(0)	2004030
30	5.6	0.0	0.0	chr2	61283575	61283611	(180909918)	+	(GAGTGA)n	Simple_repeat	1	37	(0)	2004031
15	4.9	0.0	0.0	chr2	61283612	61283622	(180909907)	+	(GT)n	Simple_repeat	1	11	(0)	2004032
1188	13.0	0.7	0.0	chr2	61283635	61283788	(180909741)	C	AluJb	SINE/Alu	(30)	282	128	2004033
1043	17.0	23.5	0.9	chr2	61311093	61311407	(180882122)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2004079
37	17.4	3.3	2.1	chr2	61311430	61311520	(180882009)	+	A-rich	Low_complexity	1	94	(0)	2004080
588	27.4	8.8	4.8	chr2	65060101	65060349	(177133180)	C	L4_A_Mam	LINE/RTE-X	(116)	4874	4615	2010499
33	24.8	6.1	0.8	chr2	66575335	66575449	(175618080)	+	(TC)n	Simple_repeat	1	122	(0)	2012928
44	30.2	2.5	3.9	chr2	67844242	67844443	(174349086)	+	(CTCC)n	Simple_repeat	1	207	(0)	2014631
255	4.2	0.0	0.4	chr2	67906469	67906741	(174286788)	+	(GGAAA)n	Simple_repeat	1	273	(0)	2014731
14	15.4	7.4	3.5	chr2	67906746	67906799	(174286730)	+	G-rich	Low_complexity	1	58	(0)	2014732
15	19.9	0.0	0.0	chr2	68046421	68046455	(174147074)	+	GA-rich	Low_complexity	1	35	(0)	2014950
4525	18.4	10.6	2.9	chr2	68230293	68231379	(173962150)	C	L1MDa	LINE/L1	(4163)	2470	1265	2015268
61	19.9	0.8	0.0	chr2	68766697	68766818	(173426711)	+	(CT)n	Simple_repeat	1	123	(0)	2016056
12	17.6	0.0	0.0	chr2	69770257	69770283	(172423246)	+	GA-rich	Low_complexity	1	27	(0)	2017725
194	24.8	9.9	5.2	chr2	70123517	70123631	(172069898)	C	MIRc	SINE/MIR	(134)	134	14	2018440
1940	17.2	2.3	0.0	chr2	70702845	70703147	(171490382)	+	AluJb	SINE/Alu	1	310	(2)	2019485
41	5.6	1.1	8.9	chr2	70703149	70703244	(171490285)	+	A-rich	Low_complexity	1	88	(0)	2019486
1144	28.1	4.5	3.7	chr2	70703245	70703705	(171489824)	+	L1ME4a	LINE/L1	5352	5816	(308)	2019481
3059	19.2	6.5	3.5	chr2	73359793	73360575	(168832954)	C	HAL1M8	LINE/L1	(1615)	1376	568	2023587
37	9.4	1.3	6.2	chr2	73383166	73383244	(168810285)	+	(CTTTC)n	Simple_repeat	1	80	(0)	2023636
21	26.5	5.5	2.1	chr2	73383245	73383253	(168810276)	+	(TCTCT)n	Simple_repeat	4	96	(0)	2023637
1638	19.6	5.3	0.7	chr2	73383258	73383542	(168809987)	C	AluJo	SINE/Alu	(13)	299	1	2023638
2138	7.6	0.8	0.0	chr2	86378334	86378597	(155814932)	C	AluY	SINE/Alu	(6)	305	40	2042575
16858	14.2	2.8	7.4	chr2	86378598	86380552	(155812977)	C	L1MA5	LINE/L1	(1979)	5583	3747	2042569
1400	21.1	2.6	16.3	chr2	86801219	86801261	(155392268)	+	Charlie2a	DNA/hAT-Charlie	1967	2004	(857)	2043219
31	19.6	0.0	1.5	chr2	86801267	86801334	(155392195)	+	(CTCC)n	Simple_repeat	1	68	(0)	2043222
18	39.0	1.2	0.0	chr2	86801335	86801348	(155392181)	+	(TCTC)n	Simple_repeat	2	84	(0)	2043223
1690	16.3	6.2	1.4	chr2	86801351	86801644	(155391885)	C	AluJb	SINE/Alu	(1)	311	3	2043224
2322	25.9	7.8	11.2	chr2	98851770	98854003	(143339526)	+	L1MC4	LINE/L1	575	2600	(4140)	2055576
715	11.8	2.6	5.0	chr2	99339541	99339659	(142853870)	C	FLAM_A	SINE/Alu	(10)	132	17	2056314
31	31.4	0.8	3.1	chr2	99376388	99376515	(142817014)	+	GA-rich	Low_complexity	1	129	(0)	2056379
2349	10.8	0.3	1.6	chr2	100001413	100001726	(142191803)	C	AluSg	SINE/Alu	(0)	310	1	2057262
2203	13.1	0.0	0.0	chr2	100519705	100520002	(141673527)	+	AluSx	SINE/Alu	2	299	(13)	2058010
44	1.8	0.0	1.7	chr2	100520009	100520066	(141673463)	+	(GGAAA)n	Simple_repeat	1	58	(0)	2058011
2733	19.7	7.2	2.9	chr2	101012059	101012712	(141180817)	+	L1MB8	LINE/L1	5495	6178	(0)	2058846
18	18.6	0.0	5.6	chr2	101252681	101252734	(140940795)	+	(CGCCC)n	Simple_repeat	1	54	(0)	2059271
22	10.2	2.3	2.2	chr2	104854844	104854887	(137338642)	+	(GAGGA)n	Simple_repeat	1	45	(0)	2064067
13	20.1	0.0	2.8	chr2	104873433	104873468	(137320061)	+	(GCCCG)n	Simple_repeat	1	36	(0)	2064084
16	6.9	6.5	0.0	chr2	104873528	104873558	(137319971)	+	(CACTCA)n	Simple_repeat	1	33	(0)	2064085
1248	18.8	5.0	4.4	chr2	108536886	108537027	(133656502)	C	L1MD2	LINE/L1	(677)	5682	5549	2069395
985	21.6	7.4	3.9	chr2	108537033	108537292	(133656237)	C	Charlie1a	DNA/hAT-Charlie	(1185)	270	1	2069394
59	4.6	0.0	0.0	chr2	109248868	109248934	(132944595)	+	(TCCTG)n	Simple_repeat	1	67	(0)	2070499
1376	17.9	1.3	1.3	chr2	109248958	109249181	(132944348)	C	AluJr	SINE/Alu	(88)	224	1	2070500
3469	19.8	7.5	0.3	chr2	112534351	112534916	(129658613)	+	L1M4	LINE/L1	162	752	(6765)	2075257
35	28.0	1.9	3.8	chr2	112534918	112535038	(129658491)	+	GA-rich	Low_complexity	1	166	(0)	2075259
19	9.4	6.1	3.9	chr2	112535039	112535087	(129658442)	+	A-rich	Low_complexity	1	52	(0)	2075260
2107	12.3	0.0	2.7	chr2	112560775	112561075	(129632454)	+	AluSz	SINE/Alu	1	293	(19)	2075308
18	20.5	0.0	2.1	chr2	112561224	112561270	(129632259)	+	(AGTAGAA)n	Simple_repeat	1	47	(0)	2075309
168	24.9	0.5	0.9	chr2	120480722	120481140	(121712389)	+	(GT)n	Simple_repeat	1	421	(0)	2087040
1099	15.2	14.4	7.4	chr2	121456222	121456464	(120737065)	+	AluJo	SINE/Alu	5	267	(45)	2088715
59	13.0	6.2	2.6	chr2	121456467	121456610	(120736919)	+	A-rich	Low_complexity	1	153	(0)	2088716
100	34.2	1.4	3.5	chr2	121582185	121582665	(120610864)	+	GA-rich	Low_complexity	20	489	(0)	2088911
29	9.8	0.0	6.5	chr2	121743635	121743696	(120449833)	+	(TTTCC)n	Simple_repeat	1	62	(0)	2089253
1411	10.9	0.0	0.0	chr2	121743698	121743881	(120449648)	C	AluSq	SINE/Alu	(3)	310	127	2089254
314	17.4	4.4	3.9	chr2	122582911	122583769	(119609760)	+	GA-rich	Low_complexity	1	897	(0)	2090612
102	3.3	0.0	9.5	chr2	126264747	126264936	(115928593)	+	(AAGGA)n	Simple_repeat	1	190	(0)	2095694
801	24.1	0.9	0.4	chr2	132270234	132271773	(109921756)	+	GA-rich	Low_complexity	396	1942	(0)	2104316
71	16.7	5.2	3.0	chr2	133856781	133856971	(108336558)	+	A-rich	Low_complexity	1	201	(0)	2106562
588	18.6	0.0	0.0	chr2	134068723	134068819	(108124710)	+	AluSz6	SINE/Alu	215	311	(1)	2106875
84	21.0	1.4	2.8	chr2	134068820	134069027	(108124502)	+	A-rich	Low_complexity	1	211	(0)	2106876
1573	15.7	5.1	5.1	chr2	138497125	138497398	(103696131)	+	AluJr	SINE/Alu	1	274	(38)	2113513
76	17.5	5.6	2.6	chr2	138497400	138497614	(103695915)	+	A-rich	Low_complexity	1	227	(0)	2113514
75	0.0	0.0	3.8	chr2	142418863	142418942	(99774587)	+	(AAAGG)n	Simple_repeat	1	80	(0)	2118769
27	26.8	1.2	1.2	chr2	142668220	142668300	(99525229)	+	GA-rich	Low_complexity	1	82	(0)	2119087
1735	19.2	1.3	1.0	chr2	144136044	144136327	(98057202)	+	AluJb	SINE/Alu	1	286	(26)	2120982
26	3.4	0.0	0.0	chr2	144136328	144136357	(98057172)	+	(GAGGG)n	Simple_repeat	1	30	(0)	2120983
1735	19.2	1.3	1.0	chr2	144136358	144136380	(98057149)	+	AluJb	SINE/Alu	287	309	(3)	2120982
64	10.5	0.8	5.4	chr2	144136384	144136511	(98057018)	+	A-rich	Low_complexity	1	129	(0)	2120984
669	33.8	14.3	2.7	chr2	144136517	144136923	(98056606)	C	L3	LINE/CR1	(2356)	1743	1282	2120980
42	13.6	2.3	2.3	chr2	144520396	144520481	(97673048)	+	(CCTC)n	Simple_repeat	1	88	(0)	2121497
1447	18.2	5.3	1.6	chr2	144552674	144552926	(97640603)	+	AluJo	SINE/Alu	48	310	(2)	2121553
62	12.2	2.6	1.7	chr2	144552928	144553042	(97640487)	+	A-rich	Low_complexity	1	118	(0)	2121554
505	26.8	2.3	0.0	chr2	144553044	144553170	(97640359)	C	MER94	DNA/hAT-Blackjack	(4)	130	1	2121555
474	35.8	5.4	3.0	chr2	156793939	156794472	(85399057)	C	MLT1K	LTR/ERVL-MaLR	(17)	578	13	2137923
150	10.1	3.5	3.3	chr2	157826681	157826969	(84366560)	+	A-rich	Low_complexity	1	299	(0)	2139243
16	0.0	5.0	0.0	chr2	159616568	159616587	(82576942)	+	(TC)n	Simple_repeat	1	21	(0)	2141865
45	12.0	3.2	2.0	chr2	165155327	165155406	(77038123)	+	(CCTTTC)n	Simple_repeat	1	80	(0)	2149293
1919	17.8	0.3	0.0	chr2	165155407	165155698	(77037831)	C	AluJb	SINE/Alu	(19)	293	1	2149294
526	26.6	1.6	1.2	chr2	165665766	165667178	(76526351)	+	A-rich	Low_complexity	1	1436	(0)	2149975
2846	17.8	5.5	0.8	chr2	168513141	168513762	(73679767)	C	L1MC3	LINE/L1	(0)	7785	7133	2153662
15	16.7	6.1	1.9	chr2	168513763	168513811	(73679718)	+	(TTTCTC)n	Simple_repeat	1	52	(0)	2153663
20	24.4	1.4	6.0	chr2	169734378	169734473	(72459056)	+	G-rich	Low_complexity	1	91	(0)	2155496
602	30.3	7.8	7.5	chr2	169982766	169983097	(72210432)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	217	2155966
896	21.1	4.9	9.0	chr2	169983174	169983252	(72210277)	C	MLT1H	LTR/ERVL-MaLR	(315)	234	156	2155966
2203	12.5	0.0	1.6	chr2	169983253	169983557	(72209972)	C	AluSz6	SINE/Alu	(8)	304	5	2155967
303	26.4	14.3	2.2	chr2	173092407	173092577	(69100952)	C	MIR1_Amn	SINE/MIR	(8)	222	32	2161122
133	4.6	2.2	8.9	chr2	174454628	174454902	(67738627)	+	GA-rich	Low_complexity	1	281	(0)	2163291
360	31.5	5.7	11.7	chr2	174901215	174901649	(67291880)	+	L2c	LINE/L2	2939	3345	(42)	2163981
308	33.8	7.3	8.5	chr2	175011366	175011843	(67181686)	C	L2a	LINE/L2	(1)	3425	2917	2164169
17	22.8	0.0	0.0	chr2	176096831	176096866	(66096663)	+	GA-rich	Low_complexity	1	36	(0)	2165659
62	21.4	7.7	2.5	chr2	176106239	176106499	(66087030)	+	GA-rich	Low_complexity	1	281	(0)	2165663
632	33.2	1.3	2.5	chr2	177634979	177635216	(64558313)	C	L3	LINE/CR1	(26)	4073	3839	2167882
2101	12.7	2.9	0.0	chr2	181751429	181751727	(60441802)	+	AluSx1	SINE/Alu	1	308	(4)	2173093
274	23.6	8.6	0.0	chr2	190342381	190342486	(51851043)	C	HAL1	LINE/L1	(109)	2398	2283	2184204
231	22.2	7.7	1.4	chr2	190883130	190883202	(51310327)	+	LTR90A	LTR	868	945	(31)	2185069
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
85	5.1	0.0	5.8	chr2	195296649	195296787	(46896742)	+	(GAAAG)n	Simple_repeat	1	139	(0)	2190699
24	12.6	0.0	0.0	chr2	196987961	196987996	(45205533)	+	(GA)n	Simple_repeat	1	36	(0)	2193213
323	35.2	9.3	1.0	chr2	198203877	198204172	(43989357)	C	L2	LINE/L2	(1060)	2359	2037	2195177
41	23.2	4.4	2.1	chr2	198445004	198445140	(43748389)	+	(TTTCCTT)n	Simple_repeat	1	143	(0)	2195540
16	11.4	2.3	6.7	chr2	199443810	199443853	(42749676)	+	A-rich	Low_complexity	1	45	(0)	2196837
4841	2.5	0.2	0.2	chr2	201126038	201126595	(41066934)	C	LTR6B	LTR/ERV1	(0)	558	1	2199587
480	27.2	16.2	1.4	chr2	201126596	201126815	(41066714)	+	LTR67B	LTR/ERVL	338	596	(24)	2199588
12	19.8	4.7	2.2	chr2	201807808	201807850	(40385679)	+	(CTTTCCC)n	Simple_repeat	1	45	(0)	2200620
406	26.0	8.6	0.0	chr2	203401065	203401191	(38792338)	+	LTR33	LTR/ERVL	1	139	(376)	2203927
21	32.7	2.9	4.2	chr2	203401196	203401335	(38792194)	+	(TTTTCC)n	Simple_repeat	1	144	(0)	2203928
399	2.0	0.0	0.0	chr2	206996887	206996936	(35196593)	C	MADE1	DNA/TcMar-Mariner	(30)	50	1	2209416
21	3.2	3.1	0.0	chr2	209460522	209460553	(32732976)	+	(TTCCCT)n	Simple_repeat	1	33	(0)	2213063
31	1.8	4.5	7.1	chr2	209460555	209460621	(32732908)	+	(TTCC)n	Simple_repeat	1	70	(0)	2213064
773	22.5	2.1	9.2	chr2	211611270	211611573	(30581956)	+	LTR12F	LTR/ERV1	223	504	(15)	2215829
295	40.5	2.6	0.7	chr2	212361636	212361784	(29831745)	+	MIR	SINE/MIR	1	152	(110)	2216848
72	26.8	6.1	0.0	chr2	216002731	216002994	(26190535)	+	(TCTC)n	Simple_repeat	1	280	(0)	2221973
74	7.4	6.0	1.4	chr2	216024895	216025028	(26168501)	+	(GGAAA)n	Simple_repeat	1	142	(0)	2222014
56	5.8	1.4	1.3	chr2	216187822	216187895	(26005634)	+	(CT)n	Simple_repeat	1	75	(0)	2222314
406	22.4	3.1	6.6	chr2	216526857	216527023	(25666506)	C	L1MC4a	LINE/L1	(1926)	5956	5796	2222909
29	21.7	2.6	0.0	chr2	216527051	216527107	(25666422)	+	(CTCT)n	Simple_repeat	1	59	(0)	2222910
79	4.8	0.0	0.0	chr2	216527108	216527195	(25666334)	+	(CCTTT)n	Simple_repeat	1	88	(0)	2222911
29	21.7	2.6	0.0	chr2	216527196	216527215	(25666314)	+	(CTCT)n	Simple_repeat	4	23	(0)	2222912
357	19.7	2.4	6.2	chr2	216527216	216527237	(25666292)	C	L1ME4b	LINE/L1	(315)	577	554	2222913
1496	16.1	0.4	6.9	chr2	216527238	216527528	(25666001)	C	AluJb	SINE/Alu	(40)	272	1	2222914
17	18.6	4.6	0.0	chr2	216695318	216695373	(25498156)	+	A-rich	Low_complexity	1	58	(0)	2223260
77	30.7	4.1	1.9	chr2	219294198	219294561	(22898968)	+	GA-rich	Low_complexity	1	379	(0)	2227661
59	6.2	6.7	0.9	chr2	220845928	220846031	(21347498)	+	(AGGGAA)n	Simple_repeat	1	111	(0)	2230154
68	16.3	6.7	1.6	chr2	222707220	222707397	(19486132)	+	GA-rich	Low_complexity	1	190	(0)	2233026
37	4.7	0.0	0.0	chr2	222707398	222707441	(19486088)	+	(AGGGAGGGA)n	Simple_repeat	1	44	(0)	2233027
245	15.7	21.9	1.1	chr2	222707457	222707546	(19485983)	C	MIR3	SINE/MIR	(78)	130	17	2233028
860	30.2	15.7	6.7	chr2	222789539	222789667	(19403862)	+	LTR81B	LTR/Gypsy	374	510	(883)	2233209
47	2.3	0.0	0.0	chr2	222789668	222789712	(19403817)	+	(GT)n	Simple_repeat	1	45	(0)	2233210
860	30.2	15.7	6.7	chr2	222789713	222790198	(19403331)	+	LTR81B	LTR/Gypsy	511	1077	(316)	2233209
390	17.9	3.5	0.0	chr2	223945638	223945721	(18247808)	C	Kanga1b	DNA/TcMar-Tc2	(690)	89	3	2235162
22	3.0	2.8	2.7	chr2	226792122	226792157	(15401372)	+	(TCTTTT)n	Simple_repeat	1	37	(0)	2239461
1647	15.9	1.0	5.4	chr2	231033844	231034158	(11159371)	C	AluJb	SINE/Alu	(6)	306	6	2246113
70	1.4	0.0	2.6	chr2	232000593	232000668	(10192861)	+	(TTTCC)n	Simple_repeat	1	76	(0)	2248047
335	17.6	10.8	1.3	chr2	234881790	234881864	(7311665)	+	MLT1M	LTR/ERVL-MaLR	96	178	(494)	2252707
2628	18.4	2.6	3.0	chr2	234881913	234882443	(7311086)	C	MER45B	DNA/hAT-Tip100	(17)	1023	495	2252708
651	25.0	13.3	2.7	chr2	236559275	236559603	(5633926)	C	L1ME3Cz	LINE/L1	(11)	986	618	2255176
477	27.9	7.6	2.1	chr20	163960	164363	(64279804)	C	L1M5	LINE/L1	(2528)	3618	3181	2262326
562	27.6	5.4	8.4	chr20	164387	164468	(64279699)	+	MLT1I	LTR/ERVL-MaLR	104	183	(228)	2262327
2151	12.7	0.3	0.0	chr20	164469	164759	(64279408)	+	AluSx1	SINE/Alu	7	298	(14)	2262328
240	20.3	3.9	11.9	chr20	299482	299565	(64144602)	C	Plat_L3	LINE/CR1	(2)	3584	3508	2262591
378	29.8	2.6	0.0	chr20	299568	299681	(64144486)	C	MIRc	SINE/MIR	(144)	124	8	2262592
44	31.3	3.2	2.6	chr20	675965	676194	(63767973)	+	GA-rich	Low_complexity	1	231	(0)	2263486
317	31.2	2.8	7.1	chr20	1202861	1203084	(63241083)	C	MLT1L	LTR/ERVL-MaLR	(207)	403	190	2264609
2225	10.0	0.3	0.3	chr20	2248656	2248954	(62195213)	C	AluSx1	SINE/Alu	(12)	300	2	2266579
90	11.9	3.1	0.6	chr20	2248967	2249126	(62195041)	+	(TTTC)n	Simple_repeat	1	165	(0)	2266580
739	23.5	0.0	0.0	chr20	2249127	2249258	(62194909)	C	FLAM_C	SINE/Alu	(11)	132	1	2266581
325	16.7	0.0	0.0	chr20	2455770	2455823	(61988344)	+	FLAM_A	SINE/Alu	86	139	(3)	2267009
43	16.8	6.0	3.5	chr20	2455826	2455980	(61988187)	+	A-rich	Low_complexity	1	158	(0)	2267010
1122	11.7	0.0	1.9	chr20	2455981	2456142	(61988025)	+	AluJo	SINE/Alu	133	291	(21)	2267011
1087	25.9	10.4	1.8	chr20	2471024	2471471	(61972696)	+	L2a	LINE/L2	2926	3416	(10)	2267029
1321	24.7	13.3	2.2	chr20	2867911	2868311	(61575856)	C	MLT1G3	LTR/ERVL-MaLR	(51)	544	93	2267721
491	24.4	15.0	0.0	chr20	2870442	2870634	(61573533)	+	L2a	LINE/L2	3198	3424	(2)	2267728
270	21.9	3.2	0.0	chr20	2870624	2870697	(61573470)	C	MIR1_Amn	SINE/MIR	(96)	172	95	2267729
2300	6.8	0.3	0.0	chr20	3054112	3054406	(61389761)	C	AluSp	SINE/Alu	(15)	298	3	2268091
327	21.3	3.6	2.7	chr20	4435283	4435393	(60008774)	C	MER121	DNA/hAT?	(168)	233	122	2270739
546	23.2	0.3	2.0	chr20	4672845	4672989	(59771178)	+	FLAM_C	SINE/Alu	2	211	(90)	2271128
33	21.0	0.0	6.7	chr20	4673087	4673190	(59770977)	+	(CCTT)n	Simple_repeat	1	104	(0)	2271129
29	3.2	0.0	0.0	chr20	4673191	4673222	(59770945)	+	(TCTT)n	Simple_repeat	1	32	(0)	2271130
1768	12.2	9.6	0.0	chr20	4673223	4673475	(59770692)	C	AluSg	SINE/Alu	(30)	280	1	2271131
25	19.8	2.6	3.8	chr20	8130075	8130151	(56314016)	+	A-rich	Low_complexity	1	79	(0)	2276794
209	20.8	7.0	1.9	chr20	9154609	9154662	(55289505)	C	L2a	LINE/L2	(1)	3425	3369	2278472
49	7.4	6.9	0.0	chr20	9154741	9154827	(55289340)	+	(TCCTT)n	Simple_repeat	1	93	(0)	2278473
96	8.0	0.7	0.7	chr20	9154831	9154967	(55289200)	+	(CCTT)n	Simple_repeat	1	138	(0)	2278474
180	20.0	0.0	0.0	chr20	10585480	10585514	(53858653)	+	L2	LINE/L2	2346	2380	(1039)	2280783
30	6.0	5.5	1.7	chr20	10585516	10585570	(53858597)	+	(CTTTTC)n	Simple_repeat	1	58	(0)	2280784
2347	10.9	0.0	2.5	chr20	10585571	10585890	(53858277)	C	AluSx	SINE/Alu	(0)	312	1	2280785
60	31.3	1.7	2.1	chr20	11849514	11849577	(52594590)	+	(TTCT)n	Simple_repeat	1	103	(0)	2282605
84	14.8	3.0	0.6	chr20	11849578	11849612	(52594555)	+	(TTCC)n	Simple_repeat	1	36	(0)	2282606
2063	18.6	1.5	5.0	chr20	11849613	11850088	(52594079)	+	MER65C	LTR/ERV1	1	459	(2)	2282607
41	21.8	0.9	3.5	chr20	17657546	17657657	(46786510)	+	A-rich	Low_complexity	1	113	(0)	2291232
252	18.9	1.9	0.0	chr20	20011149	20011201	(44432966)	C	HAL1	LINE/L1	(155)	2352	2299	2295041
614	14.1	0.0	0.0	chr20	20011202	20011286	(44432881)	C	AluYj4	SINE/Alu	(0)	311	227	2295042
13	26.0	3.9	1.9	chr20	20011287	20011300	(44432867)	+	(TTCCT)n	Simple_repeat	1	30	(23)	2295043
14	16.1	0.0	0.0	chr20	20011301	20011329	(44432838)	+	(CTCCC)n	Simple_repeat	1	29	(0)	2295044
13	26.0	3.9	1.9	chr20	20011330	20011337	(44432830)	+	(TTCCT)n	Simple_repeat	31	53	(0)	2295043
1395	13.7	8.2	2.3	chr20	20011347	20011473	(44432694)	C	AluJo	SINE/Alu	(53)	259	120	2295045
19	25.0	0.0	7.0	chr20	21511213	21511298	(42932869)	+	A-rich	Low_complexity	1	86	(0)	2297199
125	13.6	1.5	0.0	chr20	22513109	22513314	(41930853)	+	(CT)n	Simple_repeat	1	209	(0)	2298512
336	29.2	8.9	0.9	chr20	23025133	23025246	(41418921)	C	L1ME4a	LINE/L1	(1)	6123	6000	2299143
677	22.8	13.0	1.7	chr20	23025284	23025499	(41418668)	C	L1MC4	LINE/L1	(6)	8036	7783	2299144
2134	14.9	1.7	0.6	chr20	24360350	24360700	(40083467)	+	L1PA16	LINE/L1	5812	6166	(0)	2300816
70	1.5	0.0	0.0	chr20	24360708	24360774	(40083393)	+	(AAAGG)n	Simple_repeat	1	67	(0)	2300817
520	28.1	3.8	7.3	chr20	31658688	31658850	(32785317)	C	L1M5	LINE/L1	(2306)	3840	3684	2306545
21	28.6	2.6	1.3	chr20	31658851	31658927	(32785240)	+	(TTTC)n	Simple_repeat	1	79	(0)	2306547
26	0.0	3.5	0.0	chr20	31658949	31658977	(32785190)	+	(GTTTT)n	Simple_repeat	1	30	(0)	2306548
240	31.0	14.2	4.8	chr20	31677669	31677878	(32766289)	+	L2b	LINE/L2	2970	3202	(173)	2306606
102	15.6	4.0	3.4	chr20	32025038	32025262	(32418905)	+	(TTTC)n	Simple_repeat	1	224	(0)	2307447
1825	17.1	2.0	0.0	chr20	32025263	32025555	(32418612)	C	AluJb	SINE/Alu	(2)	310	12	2307448
116	24.1	2.7	3.5	chr20	34235811	34236175	(30207992)	+	GA-rich	Low_complexity	1	375	(0)	2312564
1025	13.6	5.4	10.3	chr20	34236176	34236257	(30207910)	+	Tigger3	DNA/TcMar-Tigger	831	906	(2123)	2312565
669	24.5	5.2	0.0	chr20	34388994	34389156	(30055011)	C	MER8	DNA/TcMar-Tigger	(0)	239	68	2312987
1164	15.3	3.5	10.0	chr20	34400237	34400355	(30043812)	C	AluJr	SINE/Alu	(181)	131	12	2313016
577	26.5	12.3	3.5	chr20	35145337	35145725	(29298442)	+	L1ME1	LINE/L1	5664	6088	(91)	2314630
270	29.7	5.9	5.9	chr20	35396474	35396591	(29047576)	C	MIRc	SINE/MIR	(41)	227	110	2315160
265	32.8	5.4	4.1	chr20	35545944	35546249	(28897918)	C	L2-3_Crp	LINE/L2	(1137)	959	726	2315530
244	22.1	6.8	0.0	chr20	35546258	35546325	(28897842)	C	L2	LINE/L2	(1517)	1902	1830	2315524
1137	24.3	23.6	0.3	chr20	35546326	35546964	(28897203)	C	L2	LINE/L2	(1846)	1573	740	2315524
12	20.7	0.0	2.9	chr20	36085973	36086007	(28358160)	+	G-rich	Low_complexity	1	35	(0)	2316814
253	31.5	2.7	12.2	chr20	36472532	36472701	(27971466)	C	MIR3	SINE/MIR	(51)	157	1	2317710
273	27.0	0.0	2.6	chr20	36859525	36859600	(27584567)	C	L3	LINE/CR1	(101)	3998	3925	2318635
1639	13.6	11.2	1.1	chr20	37334393	37334543	(27109624)	+	AluJo	SINE/Alu	130	312	(0)	2319769
47	23.1	0.8	3.1	chr20	37334547	37334672	(27109495)	+	GA-rich	Low_complexity	1	127	(0)	2319771
999	16.6	0.0	1.2	chr20	37334676	37334838	(27109329)	+	AluJr	SINE/Alu	137	297	(15)	2319772
467	19.6	4.9	2.6	chr20	38460186	38460338	(25983829)	+	L1M5	LINE/L1	2887	3036	(3104)	2322217
416	32.2	6.8	1.0	chr20	38460381	38460587	(25983580)	+	MamGypLTR1a	LTR/Gypsy	555	774	(10)	2322218
20	20.2	8.6	3.0	chr20	38692446	38692538	(25751629)	+	(TTCC)n	Simple_repeat	1	101	(0)	2322668
17	15.2	3.4	6.6	chr20	38699981	38700039	(25744128)	+	A-rich	Low_complexity	1	61	(0)	2322686
230	28.8	10.5	2.6	chr20	38700138	38700251	(25743916)	+	LTR16C	LTR/ERVL	357	480	(9)	2322687
808	27.8	10.2	6.7	chr20	38970505	38970758	(25473409)	+	MIR	SINE/MIR	2	265	(3)	2323254
1468	20.6	3.1	8.0	chr20	43801854	43802290	(20641877)	C	L1ME3	LINE/L1	(78)	6084	5670	2332029
56	33.0	1.8	3.9	chr20	43857157	43857431	(20586736)	+	G-rich	Low_complexity	1	280	(0)	2332136
36	9.4	4.3	5.2	chr20	44348401	44348482	(20095685)	+	(TTCCCT)n	Simple_repeat	1	81	(0)	2333260
40	2.4	0.0	0.0	chr20	44348483	44348524	(20095643)	+	(TCCTT)n	Simple_repeat	1	42	(0)	2333261
1614	15.8	0.7	4.6	chr20	44348529	44348813	(20095354)	C	AluJb	SINE/Alu	(38)	274	1	2333262
471	32.5	5.0	7.5	chr20	44576206	44576511	(19867656)	C	L2b	LINE/L2	(15)	3360	3063	2333834
209	30.9	0.0	0.0	chr20	44576606	44576673	(19867494)	+	MIR3	SINE/MIR	81	148	(60)	2333835
2708	10.2	11.4	1.2	chr20	44732144	44732560	(19711607)	C	MER4C	LTR/ERV1	(0)	465	1	2334210
246	28.2	16.4	0.0	chr20	44732561	44732639	(19711528)	C	MIRb	SINE/MIR	(56)	212	118	2334209
1182	15.3	8.5	0.5	chr20	45043601	45043817	(19400350)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	2334906
563	26.9	9.0	3.5	chr20	45043818	45043840	(19400327)	+	MIR	SINE/MIR	236	256	(6)	2334905
83	21.2	0.4	8.0	chr20	45267828	45268102	(19176065)	+	GA-rich	Low_complexity	1	276	(0)	2335265
899	21.8	0.0	1.1	chr20	45268103	45268276	(19175891)	+	AluJr4	SINE/Alu	136	307	(5)	2335266
176	8.9	8.5	0.0	chr20	46111613	46111941	(18332226)	+	GA-rich	Low_complexity	1	357	(0)	2336951
566	25.0	7.7	9.3	chr20	46111917	46111976	(18332191)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	167	2336949
1888	16.7	4.2	0.0	chr20	46171271	46171569	(18272598)	+	AluJo	SINE/Alu	1	312	(0)	2337091
97	11.9	4.6	2.0	chr20	46171570	46171764	(18272403)	+	A-rich	Low_complexity	1	204	(0)	2337092
490	34.6	15.2	0.9	chr20	47331382	47331921	(17112246)	C	L2c	LINE/L2	(915)	2504	1874	2339761
15	12.0	3.3	3.2	chr20	47493526	47493555	(16950612)	+	(TC)n	Simple_repeat	1	31	(0)	2340264
2041	11.6	1.0	1.0	chr20	48920897	48921198	(15522969)	C	AluJo	SINE/Alu	(10)	302	1	2343218
1463	16.9	6.9	1.5	chr20	49694372	49694632	(14749535)	+	AluJr	SINE/Alu	3	278	(34)	2345063
71	1.5	0.0	0.0	chr20	49694638	49694704	(14749463)	+	(AAGGGA)n	Simple_repeat	1	67	(0)	2345064
2023	19.7	10.3	1.6	chr20	49694706	49695210	(14748957)	+	Tigger9b	DNA/TcMar-Tigger	35	588	(36)	2345065
2259	10.2	1.3	0.0	chr20	49709490	49709784	(14734383)	+	AluSq2	SINE/Alu	1	299	(14)	2345090
338	26.9	9.5	8.1	chr20	49995733	49995947	(14448220)	+	L2a	LINE/L2	3100	3324	(102)	2345799
2314	8.0	0.7	0.0	chr20	49995948	49996248	(14447919)	C	AluSp	SINE/Alu	(10)	303	1	2345800
68	29.3	6.0	1.4	chr20	50259613	50259961	(14184206)	+	(TC)n	Simple_repeat	1	370	(0)	2346489
53	21.9	2.2	5.5	chr20	50418510	50418680	(14025487)	+	A-rich	Low_complexity	1	166	(0)	2346870
2527	6.8	0.7	0.0	chr20	50418681	50418989	(14025178)	+	AluSx3	SINE/Alu	1	311	(0)	2346871
349	29.4	8.7	1.6	chr20	50483877	50484004	(13960163)	C	MIRb	SINE/MIR	(106)	162	25	2347067
19	21.1	6.5	0.0	chr20	50484006	50484067	(13960100)	+	(TCTTCC)n	Simple_repeat	1	66	(0)	2347068
47	0.0	0.0	0.0	chr20	50666184	50666226	(13777941)	+	(TTTCT)n	Simple_repeat	1	43	(0)	2347421
2062	10.1	0.4	4.7	chr20	50666227	50666523	(13777644)	C	AluSx1	SINE/Alu	(28)	284	1	2347422
77	25.2	4.0	3.2	chr20	52049612	52049742	(12394425)	+	(CCTTCT)n	Simple_repeat	1	136	(0)	2350629
1340	28.5	16.7	8.7	chr20	52263937	52264680	(12179487)	C	HAL1	LINE/L1	(815)	1692	855	2351140
1879	19.0	0.0	0.6	chr20	53636483	53636793	(10807374)	+	AluJr	SINE/Alu	1	309	(3)	2353928
60	0.0	3.3	0.0	chr20	53636859	53636919	(10807248)	+	(AGGAA)n	Simple_repeat	1	63	(0)	2353929
1409	19.7	2.9	4.8	chr20	53637001	53637173	(10806994)	+	MER58B	DNA/hAT-Charlie	3	174	(167)	2353930
15	13.2	3.0	0.0	chr20	53679310	53679342	(10764825)	+	(TATTTT)n	Simple_repeat	1	34	(0)	2354046
355	23.9	13.7	4.1	chr20	56359556	56359825	(8084342)	+	MER113	DNA/hAT-Charlie	176	475	(46)	2358878
338	19.8	9.4	0.0	chr20	56554755	56554860	(7889307)	C	L1ME4b	LINE/L1	(318)	574	458	2359260
87	25.4	6.7	0.8	chr20	58515815	58516144	(5928023)	+	GA-rich	Low_complexity	1	352	(0)	2363060
325	23.9	2.8	0.5	chr20	62451527	62452348	(1991819)	+	GA-rich	Low_complexity	1	845	(0)	2368586
221	29.0	6.1	3.1	chr21	15052152	15052247	(31657736)	C	MIRc	SINE/MIR	(137)	131	33	2378602
62	22.1	0.7	2.0	chr21	16187796	16187944	(30522039)	+	(CTTT)n	Simple_repeat	1	150	(0)	2380120
90	26.5	1.2	1.6	chr21	17397741	17397988	(29311995)	+	GA-rich	Low_complexity	1	251	(0)	2381507
342	26.9	12.2	0.9	chr21	17397995	17398110	(29311873)	+	HAL1	LINE/L1	2377	2507	(0)	2381508
504	17.2	0.0	1.1	chr21	17454673	17454759	(29255224)	C	AluSp	SINE/Alu	(13)	300	215	2381627
23	17.1	0.0	3.6	chr21	25577031	25577086	(21132897)	+	(TTTTG)n	Simple_repeat	1	56	(0)	2392665
2416	8.4	0.0	0.3	chr21	25577094	25577390	(21132593)	C	AluSq10	SINE/Alu	(17)	296	1	2392666
50	28.9	0.7	1.3	chr21	25701348	25701497	(21008486)	+	(CTTC)n	Simple_repeat	1	151	(0)	2392896
1046	29.2	12.0	8.2	chr21	25801280	25802192	(20907791)	+	L1MEi	LINE/L1	106	1057	(1223)	2393047
132	23.8	2.5	3.4	chr21	27695230	27695632	(19014351)	+	(TCCT)n	Simple_repeat	1	413	(0)	2395752
367	28.0	14.5	2.7	chr21	29075693	29075916	(17634067)	+	L2c	LINE/L2	3026	3280	(107)	2397702
1931	15.6	0.0	5.5	chr21	31601417	31601627	(15108356)	+	AluJb	SINE/Alu	116	310	(2)	2401698
310	30.2	1.6	13.3	chr21	31601702	31601911	(15108072)	+	MLT1C	LTR/ERVL-MaLR	111	295	(217)	2401697
400	31.5	4.8	7.8	chr21	31663464	31663721	(15046262)	C	MIR	SINE/MIR	(3)	259	10	2401859
11	32.8	0.0	0.0	chr21	33077145	33077193	(13632790)	+	(TTTCTT)n	Simple_repeat	1	49	(0)	2404260
12	28.7	0.0	2.1	chr21	33541870	33541917	(13168066)	+	A-rich	Low_complexity	1	48	(0)	2405205
1386	17.1	7.3	1.1	chr21	33648570	33648838	(13061145)	+	AluJr	SINE/Alu	6	292	(20)	2405373
28	18.1	4.5	0.0	chr21	33648854	33648919	(13061064)	+	GA-rich	Low_complexity	1	69	(0)	2405374
413	27.8	4.8	2.7	chr21	33649026	33649210	(13060773)	+	Tigger12c	DNA/TcMar-Tigger	536	724	(10)	2405375
13	24.1	0.0	0.0	chr21	33798066	33798086	(12911897)	+	(CTTTT)n	Simple_repeat	1	21	(0)	2405642
1973	18.5	0.0	0.6	chr21	33798087	33798399	(12911584)	C	AluJr	SINE/Alu	(1)	311	1	2405643
14	21.0	3.3	4.8	chr21	34888319	34888378	(11821605)	+	(CACGC)n	Simple_repeat	1	62	(0)	2407307
17	12.7	0.0	0.0	chr21	34888500	34888525	(11821458)	+	(A)n	Simple_repeat	1	26	(0)	2407308
14	25.5	1.8	3.5	chr21	35593569	35593624	(11116359)	+	GA-rich	Low_complexity	1	57	(0)	2408345
259	19.2	2.7	5.2	chr21	35704611	35705309	(11004674)	+	GA-rich	Low_complexity	43	729	(0)	2408516
453	22.4	2.4	7.3	chr21	36070654	36070831	(10639152)	C	L1MC4a	LINE/L1	(14)	7868	7700	2409085
303	25.0	8.7	8.8	chr21	36112703	36112882	(10597101)	C	MIR	SINE/MIR	(4)	258	88	2409151
2307	10.4	0.7	0.7	chr21	36167167	36167474	(10542509)	C	AluSx1	SINE/Alu	(4)	308	1	2409279
22	21.7	9.1	0.0	chr21	36321672	36321748	(10388235)	+	(TC)n	Simple_repeat	1	84	(0)	2409610
57	37.2	1.6	3.3	chr21	36700209	36700591	(10009392)	+	(TTCT)n	Simple_repeat	1	389	(0)	2410358
625	26.7	5.4	0.0	chr21	36739157	36739332	(9970651)	C	MIR	SINE/MIR	(1)	261	76	2410394
2026	11.1	0.7	6.0	chr21	36867851	36868165	(9841818)	+	AluSz	SINE/Alu	1	298	(14)	2410583
48	17.1	6.5	2.5	chr21	36868167	36868310	(9841673)	+	A-rich	Low_complexity	1	149	(0)	2410584
98	5.8	5.8	2.2	chr21	37039661	37039847	(9670136)	+	(CTCCCT)n	Simple_repeat	1	193	(0)	2410916
1630	14.4	1.4	5.8	chr21	37039854	37040145	(9669838)	C	AluJr	SINE/Alu	(33)	279	1	2410917
447	29.4	17.6	2.5	chr21	37071884	37072242	(9637741)	+	L2c	LINE/L2	2924	3377	(10)	2410976
13	31.3	6.0	1.1	chr21	37601190	37601273	(9108710)	+	(TCTC)n	Simple_repeat	1	89	(0)	2411855
393	25.8	3.2	0.8	chr21	38351476	38351596	(8358387)	+	MER5A1	DNA/hAT-Charlie	39	162	(4)	2412913
45	34.5	0.5	4.2	chr21	38351665	38351878	(8358105)	+	G-rich	Low_complexity	1	215	(0)	2412914
209	24.8	9.4	5.3	chr21	38436522	38436653	(8273330)	+	MIR	SINE/MIR	46	183	(79)	2413022
229	24.5	0.0	0.0	chr21	38737900	38737952	(7972031)	C	MIR	SINE/MIR	(9)	253	201	2413419
1560	20.4	8.6	2.9	chr21	38737953	38738273	(7971710)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	65	2413420
12	12.0	7.9	2.4	chr21	39083228	39083265	(7626718)	+	(CCTGG)n	Simple_repeat	1	41	(0)	2413975
42	15.6	2.5	0.0	chr21	41151794	41151872	(5558111)	+	GA-rich	Low_complexity	1	81	(0)	2417037
80	25.2	3.0	4.8	chr21	41153470	41153776	(5556207)	+	A-rich	Low_complexity	1	301	(0)	2417040
147	22.2	1.8	5.4	chr21	41545502	41545956	(5164027)	+	A-rich	Low_complexity	1	463	(0)	2417608
2689	11.2	1.0	1.3	chr21	41545959	41546355	(5163628)	+	MER57B1	LTR/ERV1	2	397	(4)	2417609
1097	21.6	1.5	0.0	chr21	41780551	41780819	(4929164)	+	L1MC5	LINE/L1	7417	7689	(1615)	2417989
92	20.9	0.4	4.3	chr21	41780820	41781052	(4928931)	+	GA-rich	Low_complexity	1	234	(0)	2417991
2172	13.3	0.3	0.7	chr21	42288426	42288734	(4421249)	+	AluSz	SINE/Alu	1	308	(4)	2418686
24	5.9	10.7	1.6	chr21	42288736	42288791	(4421192)	+	A-rich	Low_complexity	1	62	(0)	2418687
951	16.2	16.2	3.9	chr21	42288793	42289099	(4420884)	C	MSTA	LTR/ERVL-MaLR	(25)	350	1	2418688
5739	12.8	0.4	2.9	chr21	43608999	43609444	(3100539)	+	L1PA17	LINE/L1	5729	6157	(9)	2420492
14	24.8	6.2	1.4	chr21	44013675	44013739	(2696244)	+	(TTCT)n	Simple_repeat	1	69	(0)	2421182
1951	11.1	0.3	10.2	chr21	44014384	44014727	(2695256)	C	AluSx	SINE/Alu	(2)	310	1	2421183
36	1.5	8.2	3.8	chr21	44404599	44404671	(2305312)	+	(GTGATGATA)n	Simple_repeat	1	79	(0)	2421704
7537	14.1	7.0	0.8	chr21	46103796	46105096	(604887)	+	L1M4c	LINE/L1	669	2065	(4581)	2423515
17	21.1	5.5	0.0	chr21	46674608	46674662	(35321)	+	GA-rich	Low_complexity	1	58	(0)	2424259
249	16.7	2.3	0.0	chr22	17381379	17381420	(33437048)	C	U6	snRNA	(3)	104	62	2428882
446	24.8	17.6	1.9	chr22	17706369	17706574	(33111894)	+	MIRc	SINE/MIR	11	255	(13)	2429599
2091	8.8	6.9	0.0	chr22	18149659	18149942	(32668526)	+	AluSx	SINE/Alu	1	305	(7)	2430308
2180	9.0	0.0	6.1	chr22	19297182	19297493	(31520975)	+	AluSz	SINE/Alu	1	293	(19)	2431754
1954	24.0	7.8	7.8	chr22	19297494	19297823	(31520645)	+	L1MEg	LINE/L1	1506	1789	(4436)	2431751
7558	8.4	2.6	0.5	chr22	19947258	19948243	(30870225)	C	LTR13	LTR/ERVK	(0)	1007	1	2432723
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
8605	20.1	4.4	4.1	chr22	20658937	20661924	(30156544)	C	L1M1	LINE/L1	(814)	6748	3216	2433710
591	25.4	14.3	0.5	chr22	20857616	20857825	(29960643)	C	MIRb	SINE/MIR	(3)	265	22	2434075
442	29.2	13.3	1.0	chr22	20858043	20858246	(29960222)	C	MIRc	SINE/MIR	(32)	236	4	2434076
2373	8.4	0.3	0.0	chr22	20916265	20916560	(29901908)	+	AluSx1	SINE/Alu	1	297	(15)	2434223
25	0.0	5.6	0.0	chr22	20916561	20916596	(29901872)	+	(GGGAAA)n	Simple_repeat	1	38	(0)	2434224
344	24.6	5.5	4.6	chr22	20916597	20916716	(29901752)	+	L1MEg	LINE/L1	1979	2089	(4997)	2434225
232	26.6	12.7	1.2	chr22	20926544	20926703	(29891765)	C	L2c	LINE/L2	(978)	2441	2261	2434243
381	26.5	20.6	0.5	chr22	21569715	21569900	(29248568)	C	MIRb	SINE/MIR	(0)	268	36	2435445
399	32.4	8.7	5.2	chr22	21569934	21570220	(29248248)	+	L2c	LINE/L2	3039	3336	(51)	2435446
1148	18.6	13.6	2.1	chr22	21598093	21598525	(29219943)	C	L1M3	LINE/L1	(2850)	3290	2800	2435497
16	0.0	0.0	0.0	chr22	21598542	21598559	(29219909)	+	(T)n	Simple_repeat	1	18	(0)	2435501
761	16.9	0.0	0.0	chr22	21598577	21598694	(29219774)	+	AluJo	SINE/Alu	1	118	(194)	2435502
241	29.3	1.1	4.2	chr22	21824082	21824177	(28994291)	C	MER20B	DNA/hAT-Charlie	(604)	179	87	2435980
15	20.0	0.0	0.0	chr22	21824186	21824214	(28994254)	+	A-rich	Low_complexity	1	29	(0)	2435981
770	16.0	17.5	1.8	chr22	21824397	21824672	(28993796)	+	L1ME1	LINE/L1	5217	5547	(696)	2435982
194	24.2	10.1	1.6	chr22	21837406	21837468	(28981000)	C	L2	LINE/L2	(1111)	2308	2240	2436013
28	14.3	1.5	4.4	chr22	21938582	21938648	(28879820)	+	A-rich	Low_complexity	1	68	(0)	2436249
299	29.2	6.6	0.0	chr22	21938763	21938875	(28879593)	C	MER5C	DNA/hAT-Charlie	(49)	264	144	2436250
335	34.3	4.5	1.8	chr22	23565343	23565512	(27252956)	C	MIR3	SINE/MIR	(24)	184	5	2438495
15	26.9	3.3	1.6	chr22	23565552	23565612	(27252856)	+	(CCCTCT)n	Simple_repeat	1	63	(0)	2438496
31	2.3	0.0	7.7	chr22	24698654	24698705	(26119763)	+	(CCTTT)n	Simple_repeat	1	52	(0)	2440490
25	29.5	0.0	1.3	chr22	24698709	24698785	(26119683)	+	(TCCT)n	Simple_repeat	1	77	(0)	2440491
23	37.6	1.9	0.0	chr22	24698786	24698808	(26119660)	+	(CTCT)n	Simple_repeat	4	105	(0)	2440492
2174	12.5	1.9	0.3	chr22	24698809	24699111	(26119357)	C	AluSq2	SINE/Alu	(0)	313	6	2440493
534	23.5	9.5	4.1	chr22	25051304	25051472	(25766996)	+	MIRc	SINE/MIR	26	204	(64)	2441336
21	23.0	3.3	5.3	chr22	25051534	25051625	(25766843)	+	(CCTTT)n	Simple_repeat	1	95	(0)	2441337
319	24.4	12.4	0.8	chr22	25051631	25051758	(25766710)	C	MIR3	SINE/MIR	(46)	162	18	2441338
722	26.0	3.5	3.1	chr22	25448782	25449075	(25369393)	C	L1M3	LINE/L1	(744)	5402	5102	2442212
61	0.0	0.0	0.0	chr22	25620007	25620058	(25198410)	+	(TG)n	Simple_repeat	1	52	(0)	2442585
3271	11.8	4.3	2.0	chr22	25620059	25620603	(25197865)	C	LTR9B	LTR/ERV1	(86)	558	1	2442586
162	24.2	5.1	0.6	chr22	26159872	26160357	(24658111)	+	GA-rich	Low_complexity	1	511	(0)	2443692
382	32.5	3.3	3.7	chr22	26360652	26360865	(24457603)	+	L2b	LINE/L2	3132	3344	(31)	2444167
2408	11.8	0.3	0.0	chr22	26905340	26905687	(23912781)	+	L1PA13	LINE/L1	5815	6163	(0)	2445436
397	30.9	0.8	0.0	chr22	27760959	27761084	(23057384)	C	MIRb	SINE/MIR	(117)	151	25	2447459
68	29.2	2.6	0.4	chr22	27761182	27761414	(23057054)	+	(TCTC)n	Simple_repeat	1	239	(0)	2447460
838	34.3	9.1	6.5	chr22	27913578	27914114	(22904354)	+	L3	LINE/CR1	3525	4076	(23)	2447719
3216	10.7	1.8	0.0	chr22	27933099	27933548	(22884920)	C	LTR71A	LTR/ERV1	(0)	459	2	2447751
1114	15.6	1.4	1.4	chr22	28597169	28597382	(22221086)	C	L1MB2	LINE/L1	(1)	6170	5957	2448767
195	34.6	19.1	0.0	chr22	28607804	28607930	(22210538)	+	L2	LINE/L2	2634	2790	(629)	2448789
5607	20.9	6.1	1.8	chr22	28607975	28609281	(22209187)	+	L1M4	LINE/L1	15	1380	(6137)	2448790
1702	15.8	10.6	0.0	chr22	28628660	28628937	(22189531)	+	AluJb	SINE/Alu	2	312	(0)	2448818
32	7.0	0.0	0.0	chr22	28628938	28628983	(22189485)	+	(AAGGA)n	Simple_repeat	1	46	(0)	2448819
69	8.8	1.9	11.5	chr22	28730195	28730399	(22088069)	+	A-rich	Low_complexity	1	209	(0)	2449049
757	19.1	0.0	0.0	chr22	28730434	28730564	(22087904)	+	AluJr	SINE/Alu	1	131	(181)	2449050
912	24.3	7.6	2.3	chr22	29550800	29551148	(21267320)	+	MER113	DNA/hAT-Charlie	48	416	(105)	2450820
2308	9.4	0.0	0.3	chr22	29551152	29551450	(21267018)	+	AluSx1	SINE/Alu	1	298	(14)	2450821
2357	8.2	0.3	0.0	chr22	29640852	29641142	(21177326)	+	AluSp	SINE/Alu	1	292	(21)	2451042
1869	13.5	6.1	1.4	chr22	29711881	29712177	(21106291)	+	AluJr	SINE/Alu	1	312	(0)	2451158
55	14.4	1.9	0.9	chr22	29712179	29712282	(21106186)	+	GA-rich	Low_complexity	1	106	(0)	2451159
493	22.5	12.2	0.9	chr22	29712284	29712513	(21105955)	C	L2a	LINE/L2	(310)	3116	2843	2451160
12	18.7	2.1	6.1	chr22	29781365	29781412	(21037056)	+	(CCCTTTC)n	Simple_repeat	1	49	(0)	2451316
381	32.5	1.6	2.4	chr22	29781413	29781538	(21036930)	+	L3	LINE/CR1	3483	3607	(492)	2451317
53	16.0	0.0	6.8	chr22	30108896	30109028	(20709440)	+	(TTCC)n	Simple_repeat	1	133	(0)	2451957
2355	8.8	1.7	0.0	chr22	30109029	30109323	(20709145)	C	AluSx3	SINE/Alu	(11)	300	1	2451958
91	17.1	5.5	2.4	chr22	30180755	30180992	(20637476)	+	(CTTCC)n	Simple_repeat	1	251	(0)	2452081
16	16.0	7.0	0.0	chr22	30246294	30246336	(20572132)	+	A-rich	Low_complexity	1	46	(0)	2452227
32	8.3	1.9	1.8	chr22	30246390	30246443	(20572025)	+	(GGA)n	Simple_repeat	1	55	(0)	2452228
18	7.9	3.7	0.0	chr22	31055534	31055560	(19762908)	+	(AC)n	Simple_repeat	1	28	(0)	2453899
2324	5.8	0.4	0.0	chr22	31633436	31633749	(19184719)	+	AluY	SINE/Alu	3	311	(0)	2455236
2047	19.3	7.8	4.0	chr22	31641155	31641534	(19176934)	C	Tigger7	DNA/TcMar-Tigger	(2002)	489	99	2455256
30	35.1	4.4	2.4	chr22	32077183	32077207	(18741261)	+	(TCCC)n	Simple_repeat	1	26	(0)	2456336
27	7.7	0.0	2.3	chr22	32077208	32077251	(18741217)	+	(TTCC)n	Simple_repeat	1	44	(0)	2456337
30	35.1	4.4	2.4	chr22	32077252	32077429	(18741039)	+	(TCCC)n	Simple_repeat	3	184	(0)	2456338
21	17.8	0.0	0.0	chr22	32801158	32801195	(18017273)	+	GA-rich	Low_complexity	1	38	(0)	2457741
1725	15.6	0.4	1.9	chr22	33298935	33299203	(17519265)	+	AluJb	SINE/Alu	9	273	(39)	2458762
59	23.6	2.3	2.2	chr22	33299204	33299306	(17519162)	+	A-rich	Low_complexity	75	175	(0)	2458763
20	21.4	1.7	3.3	chr22	33299275	33299351	(17519117)	+	GA-rich	Low_complexity	1	75	(0)	2458764
258	24.6	0.0	0.0	chr22	33299412	33299468	(17519000)	+	L2b	LINE/L2	3370	3426	(0)	2458748
12286	20.5	3.9	4.2	chr22	34419680	34423100	(16395368)	C	L1MD2	LINE/L1	(24)	6726	3264	2461015
107	1.0	0.0	1.9	chr22	34423101	34423207	(16395261)	+	(CTTTC)n	Simple_repeat	1	107	(0)	2461016
2235	11.2	1.4	0.0	chr22	34423208	34423483	(16394985)	C	AluSx1	SINE/Alu	(32)	280	1	2461017
12	20.6	2.4	2.4	chr22	35257999	35258039	(15560429)	+	(GGCTGC)n	Simple_repeat	1	42	(0)	2462580
1381	18.8	6.5	2.1	chr22	35539493	35539829	(15278639)	+	MER113	DNA/hAT-Charlie	121	473	(48)	2463255
159	33.8	2.0	2.3	chr22	35593151	35593840	(15224628)	+	A-rich	Low_complexity	1	704	(0)	2463384
184	10.7	2.9	7.0	chr22	36053445	36053887	(14764581)	+	(CCCTT)n	Simple_repeat	1	456	(0)	2464244
1885	16.1	0.0	4.7	chr22	36424884	36425205	(14393263)	+	AluJo	SINE/Alu	1	307	(5)	2465003
73	18.9	3.5	2.9	chr22	36425207	36425450	(14393018)	+	A-rich	Low_complexity	1	245	(0)	2465004
55	28.5	1.3	0.0	chr22	36485035	36485192	(14333276)	+	(CT)n	Simple_repeat	1	160	(0)	2465167
511	32.2	3.0	10.4	chr22	36655333	36655620	(14162848)	+	L2b	LINE/L2	3110	3375	(0)	2465570
79	9.9	1.4	4.1	chr22	36655652	36655796	(14162672)	+	(CTTT)n	Simple_repeat	1	147	(0)	2465571
2449	10.3	0.0	0.0	chr22	36655797	36656107	(14162361)	C	AluSq	SINE/Alu	(2)	311	1	2465572
293	31.9	11.5	1.4	chr22	36759727	36759866	(14058602)	C	MIR3	SINE/MIR	(15)	193	38	2465792
32	17.0	7.0	0.0	chr22	37024884	37024989	(13793479)	+	(CCTTT)n	Simple_repeat	1	113	(0)	2466338
723	14.7	2.7	0.0	chr22	37024990	37025098	(13793370)	C	AluJb	SINE/Alu	(22)	290	179	2466339
2316	10.5	1.0	0.0	chr22	37075621	37075924	(13742544)	+	AluSp	SINE/Alu	1	307	(6)	2466459
57	26.5	1.7	2.8	chr22	37075925	37076102	(13742366)	+	GA-rich	Low_complexity	1	181	(0)	2466460
64	20.9	6.4	0.0	chr22	37972023	37972194	(12846274)	+	GA-rich	Low_complexity	1	183	(0)	2468532
249	29.1	10.3	5.7	chr22	38177766	38177922	(12640546)	C	MIR	SINE/MIR	(65)	197	33	2468964
285	24.5	3.8	1.9	chr22	38464040	38464143	(12354325)	C	MIR1_Amn	SINE/MIR	(82)	148	43	2469556
19	36.0	1.9	0.9	chr22	38519714	38519779	(12298689)	+	(TACATA)n	Simple_repeat	1	107	(0)	2469672
495	29.6	12.9	1.0	chr22	38706962	38707166	(12111302)	+	MIR	SINE/MIR	20	252	(10)	2470145
2255	9.2	3.6	0.3	chr22	39332224	39332517	(11485951)	C	AluSx1	SINE/Alu	(8)	304	1	2471397
5125	12.0	1.1	1.4	chr22	39332518	39332853	(11485615)	C	Tigger1	DNA/TcMar-Tigger	(1682)	736	397	2471396
206	33.3	6.1	1.8	chr22	39593637	39593746	(11224722)	C	L2	LINE/L2	(549)	2870	2756	2471975
557	30.9	9.2	1.2	chr22	39859932	39860180	(10958288)	+	L2a	LINE/L2	3094	3364	(62)	2472437
20	13.6	3.9	3.7	chr22	39860233	39860305	(10958163)	+	A-rich	Low_complexity	1	73	(0)	2472439
27	18.0	0.0	0.0	chr22	40177925	40177974	(10640494)	+	GA-rich	Low_complexity	1	50	(0)	2473082
13	0.0	0.0	0.0	chr22	40204775	40204791	(10613677)	+	(CTG)n	Simple_repeat	1	17	(0)	2473123
38	16.8	2.6	6.0	chr22	40305810	40305923	(10512545)	+	(TTCT)n	Simple_repeat	1	117	(0)	2473314
27	16.6	1.3	6.3	chr22	40477789	40477866	(10340602)	+	A-rich	Low_complexity	1	79	(0)	2473633
86	15.2	0.0	0.0	chr22	40726473	40726619	(10091849)	+	(ATAT)n	Simple_repeat	1	147	(0)	2474211
517	29.8	2.5	0.8	chr22	41380904	41381086	(9437382)	C	MIR3	SINE/MIR	(15)	193	21	2475777
769	14.5	5.1	7.3	chr22	41684205	41684287	(9134181)	C	LTR9	LTR/ERV1	(90)	522	438	2476504
799	29.2	15.4	2.6	chr22	41684299	41684727	(9133741)	C	L1MEd	LINE/L1	(2978)	3168	2675	2476506
293	28.9	8.1	0.9	chr22	41846686	41846800	(8971668)	+	L2c	LINE/L2	3024	3147	(240)	2476910
3356	15.3	1.4	0.6	chr22	42007530	42008083	(8810385)	C	L1MB2	LINE/L1	(138)	6033	5476	2477247
90	1.2	0.0	1.1	chr22	42008084	42008171	(8810297)	+	(TCCTT)n	Simple_repeat	1	88	(0)	2477248
1558	27.1	1.9	11.2	chr22	42008172	42008221	(8810247)	C	L1MB2	LINE/L1	(2554)	5488	5488	2477247
1840	16.2	1.8	0.3	chr22	42008222	42008504	(8809964)	C	AluSz6	SINE/Alu	(23)	289	3	2477249
293	28.4	11.8	6.9	chr22	42269010	42269153	(8549315)	C	MIR3	SINE/MIR	(78)	152	1	2477692
387	15.7	4.4	0.0	chr22	43432205	43432969	(7385499)	+	GA-rich	Low_complexity	1	799	(0)	2480226
43	26.5	4.8	1.7	chr22	44332061	44332385	(6486083)	+	(CT)n	Simple_repeat	1	335	(0)	2481781
818	18.6	0.0	0.0	chr22	44488616	44488739	(6329729)	+	AluJo	SINE/Alu	2	125	(187)	2482050
89	19.1	3.1	2.2	chr22	44488745	44488969	(6329499)	+	GA-rich	Low_complexity	1	227	(0)	2482051
2046	13.5	4.8	0.0	chr22	45524803	45525099	(5293369)	+	AluSx	SINE/Alu	1	312	(0)	2484115
63	18.7	1.4	2.7	chr22	45525100	45525237	(5293231)	+	A-rich	Low_complexity	10	145	(0)	2484116
749	17.9	0.0	0.0	chr22	45525238	45525354	(5293114)	C	AluJb	SINE/Alu	(195)	117	1	2484117
314	28.6	5.9	3.5	chr22	45686288	45686403	(5132065)	C	L2c	LINE/L2	(9)	3378	3260	2484388
326	25.6	7.6	1.5	chr22	46579427	46579561	(4238907)	C	MER113	DNA/hAT-Charlie	(215)	306	163	2485762
179	23.8	2.3	0.2	chr22	47191610	47192044	(3626424)	+	GA-rich	Low_complexity	1	445	(0)	2486515
384	28.4	20.6	3.9	chr22	49696475	49696783	(1121685)	+	L1MEd	LINE/L1	868	1206	(1006)	2489638
2180	13.5	0.0	0.3	chr22	49696784	49697087	(1121381)	C	AluSz	SINE/Alu	(1)	311	9	2489641
50	15.1	2.0	1.0	chr3	5013694	5013791	(193281768)	+	(CTC)n	Simple_repeat	1	100	(0)	2499977
1895	17.2	0.3	0.3	chr3	5013942	5014237	(193281322)	C	AluJb	SINE/Alu	(16)	296	1	2499978
534	23.2	10.4	3.1	chr3	5015484	5015643	(193279916)	+	MIR	SINE/MIR	29	201	(61)	2499981
1900	15.3	3.2	0.0	chr3	5260832	5261132	(193034427)	+	AluJb	SINE/Alu	1	311	(1)	2500511
37	24.2	6.4	3.0	chr3	5261133	5261155	(193034404)	+	GA-rich	Low_complexity	81	104	(0)	2500512
28	3.3	0.0	0.0	chr3	5261156	5261186	(193034373)	+	(AAGG)n	Simple_repeat	1	31	(0)	2500513
37	24.2	6.4	3.0	chr3	5261187	5261272	(193034287)	+	GA-rich	Low_complexity	105	192	(0)	2500514
498	31.4	0.0	0.0	chr3	5360474	5360594	(192934965)	C	L2b	LINE/L2	(2)	3373	3253	2500713
62	12.0	1.7	2.5	chr3	5360603	5360719	(192934840)	+	(TTTCT)n	Simple_repeat	1	119	(0)	2500714
1769	11.7	0.0	0.5	chr3	5360747	5360968	(192934591)	C	AluSx1	SINE/Alu	(89)	223	3	2500715
412	24.7	3.8	6.1	chr3	5553124	5553287	(192742272)	+	Charlie4z	DNA/hAT-Charlie	1	160	(7)	2500996
36	23.3	0.0	0.0	chr3	5553362	5553446	(192742113)	+	(CTCT)n	Simple_repeat	1	85	(0)	2500997
85	22.8	2.3	3.8	chr3	7238721	7238978	(191056581)	+	(TTTCT)n	Simple_repeat	1	264	(0)	2503482
1686	20.1	0.6	2.8	chr3	7238982	7239300	(191056259)	C	AluJb	SINE/Alu	(0)	312	1	2503483
11	17.3	0.0	5.6	chr3	8961315	8961350	(189334209)	+	(AGTGAA)n	Simple_repeat	1	36	(0)	2506217
470	20.6	3.8	0.0	chr3	8961381	8961482	(189334077)	C	Charlie4z	DNA/hAT-Charlie	(7)	160	55	2506218
554	28.2	4.8	9.5	chr3	9720039	9720301	(188575258)	+	L1MC4	LINE/L1	2111	2360	(3855)	2507808
769	6.9	4.4	6.5	chr3	9720371	9720509	(188575050)	C	L1PA13	LINE/L1	(1)	6162	6027	2507809
77	23.6	1.0	2.5	chr3	9899430	9899631	(188395928)	+	(TTCC)n	Simple_repeat	1	204	(0)	2508207
3371	26.1	14.4	5.5	chr3	10263199	10264513	(188031046)	C	HAL1	LINE/L1	(1041)	1466	8	2509078
2270	9.7	0.0	1.0	chr3	11639592	11639890	(186655669)	+	AluSx1	SINE/Alu	2	297	(15)	2511777
231	29.1	3.7	1.2	chr3	11640010	11640089	(186655470)	+	MIR3	SINE/MIR	105	186	(22)	2511778
1787	14.3	0.4	4.2	chr3	11682430	11682570	(186612989)	+	AluSx1	SINE/Alu	146	275	(37)	2511854
389	31.5	8.4	0.5	chr3	11682656	11682853	(186612706)	+	L3	LINE/CR1	3861	4075	(24)	2511856
797	19.0	17.3	1.0	chr3	11811649	11811922	(186483637)	+	L1MB7	LINE/L1	5844	6171	(13)	2512154
238	24.6	1.4	5.5	chr3	12263121	12263193	(186032366)	C	Charlie30a	DNA/hAT-Charlie	(689)	102	33	2512959
17	26.8	3.3	0.0	chr3	12263257	12263316	(186032243)	+	GA-rich	Low_complexity	1	62	(0)	2512960
765	10.8	0.8	0.8	chr3	12263426	12263547	(186032012)	C	L1MA1	LINE/L1	(0)	6302	6181	2512961
2072	15.5	1.0	0.0	chr3	12446915	12447218	(185848341)	+	AluJb	SINE/Alu	1	307	(5)	2513272
22	26.8	0.0	0.0	chr3	12447219	12447231	(185848328)	+	G-rich	Low_complexity	52	64	(0)	2513273
693	32.6	5.3	2.9	chr3	12447320	12447478	(185848081)	C	L2c	LINE/L2	(89)	3298	3129	2513267
696	19.9	1.2	9.1	chr3	12837936	12838121	(185457438)	+	AluJo	SINE/Alu	122	292	(20)	2514222
2327	24.1	2.0	4.2	chr3	12891370	12891936	(185403623)	C	MLT2B3	LTR/ERVL	(0)	554	1	2514286
338	33.6	3.7	3.7	chr3	12891937	12892117	(185403442)	C	L1MC4	LINE/L1	(4150)	2065	1887	2514281
351	26.9	5.7	1.2	chr3	13404322	13404490	(184891069)	+	L1ME3Cz	LINE/L1	794	970	(27)	2515165
445	26.8	1.3	2.2	chr3	13868504	13869749	(184425810)	+	GA-rich	Low_complexity	11	1246	(0)	2516059
303	31.9	6.1	0.7	chr3	14211576	14211714	(184083845)	+	L3	LINE/CR1	3951	4097	(2)	2516472
3899	14.0	3.8	5.5	chr3	14262891	14263615	(184031944)	C	MER50	LTR/ERV1	(22)	712	1	2516558
20	3.1	6.1	0.0	chr3	14527239	14527271	(183768288)	+	(GAAGG)n	Simple_repeat	1	35	(0)	2517129
289	20.6	1.4	0.0	chr3	14527296	14527368	(183768191)	C	L1M5	LINE/L1	(1726)	4420	4347	2517130
36	20.7	3.1	2.0	chr3	14527369	14527465	(183768094)	+	A-rich	Low_complexity	1	100	(0)	2517131
271	24.1	4.6	0.0	chr3	14527466	14527548	(183768011)	+	MER5A	DNA/hAT-Charlie	50	136	(53)	2517132
499	21.1	9.2	0.1	chr3	14826124	14826263	(183469296)	C	L1ME2z	LINE/L1	(3)	6441	6318	2517674
204	37.0	4.7	0.0	chr3	14989143	14989223	(183306336)	+	MIR3	SINE/MIR	33	117	(91)	2517983
5321	20.9	7.4	11.7	chr3	17955129	17955606	(180339953)	C	L1MC5a	LINE/L1	(815)	1962	1527	2522643
40	0.0	4.5	0.0	chr3	17955607	17955650	(180339909)	+	(TTCCCT)n	Simple_repeat	1	46	(0)	2522645
5321	20.9	7.4	11.7	chr3	17955651	17956967	(180338592)	C	L1MC5a	LINE/L1	(1251)	1526	296	2522643
277	27.2	11.5	2.6	chr3	23378621	23378809	(174916750)	+	MER113	DNA/hAT-Charlie	314	521	(0)	2530062
625	30.5	12.5	7.3	chr3	23821454	23822229	(174473330)	C	L2a	LINE/L2	(606)	2813	1992	2530831
255	35.3	10.5	0.0	chr3	23836352	23836487	(174459072)	C	L2b	LINE/L2	(0)	3375	3224	2530860
624	29.3	4.1	1.2	chr3	23836589	23836754	(174458805)	C	MIR3	SINE/MIR	(21)	187	17	2530861
730	25.2	19.1	1.6	chr3	23915502	23916073	(174379486)	+	L2a	LINE/L2	2731	3426	(0)	2531001
19	25.7	4.1	2.6	chr3	29283456	29283528	(169012031)	+	GA-rich	Low_complexity	1	76	(0)	2538968
910	33.8	2.8	2.5	chr3	30269977	30270374	(168025185)	C	LTR16C	LTR/ERVL	(90)	399	1	2540314
125	4.9	5.0	1.9	chr3	30399766	30399966	(167895593)	+	(AAAGG)n	Simple_repeat	1	211	(0)	2540486
239	24.6	1.7	0.0	chr3	30399976	30400032	(167895527)	C	MLT1I	LTR/ERVL-MaLR	(234)	177	120	2540481
2600	17.7	9.2	0.8	chr3	33314526	33315134	(164980425)	C	Charlie1a	DNA/hAT-Charlie	(504)	951	287	2545660
67	11.2	5.7	3.6	chr3	33315171	33315327	(164980232)	+	(CTTT)n	Simple_repeat	1	166	(0)	2545661
465	23.9	19.0	12.6	chr3	33315328	33315566	(164979993)	C	Charlie1a	DNA/hAT-Charlie	(1197)	258	1	2545660
311	39.8	3.6	1.8	chr3	33811514	33811677	(164483882)	C	L2b	LINE/L2	(598)	2821	2655	2546499
5008	21.4	10.1	3.1	chr3	38145696	38147555	(160148004)	+	L1MDa	LINE/L1	15	2166	(4467)	2552576
5831	11.8	1.2	3.0	chr3	40474938	40475206	(157820353)	C	MER4D1	LTR/ERV1	(0)	900	637	2556059
58	1.6	0.0	3.0	chr3	40475207	40475272	(157820287)	+	(TTTCC)n	Simple_repeat	1	66	(0)	2556060
5831	11.8	1.2	3.0	chr3	40475273	40475313	(157820246)	C	MER4D1	LTR/ERV1	(264)	636	605	2556059
2706	4.3	0.0	0.0	chr3	40475314	40475617	(157819942)	+	AluY	SINE/Alu	1	304	(7)	2556061
42	29.7	7.9	1.7	chr3	41602207	41602473	(156693086)	+	GA-rich	Low_complexity	1	288	(0)	2557690
260	18.1	4.6	5.7	chr3	43297285	43297372	(154998187)	+	L1ME4a	LINE/L1	6021	6107	(17)	2560438
319	30.5	2.5	7.9	chr3	43297451	43297664	(154997895)	+	L1ME4a	LINE/L1	5911	6112	(12)	2560439
637	27.8	7.1	0.1	chr3	44980401	44980581	(153314978)	C	MIRb	SINE/MIR	(68)	200	6	2562989
190	21.4	8.2	3.5	chr3	44980575	44980632	(153314927)	C	L3b	LINE/CR1	(228)	5004	4944	2562990
12	11.6	3.3	3.2	chr3	47421123	47421152	(150874407)	+	(GGCAG)n	Simple_repeat	1	31	(0)	2567105
1794	27.4	25.0	1.4	chr3	48437617	48438197	(149857362)	+	L2a	LINE/L2	1393	2323	(1096)	2569306
251	33.7	12.1	1.9	chr3	49461977	49462395	(148833164)	+	L2c	LINE/L2	2923	3385	(2)	2571433
7193	15.1	10.8	12.0	chr3	52159468	52160111	(146135448)	+	MER4-int	LTR/ERV1	1276	1790	(4808)	2575493
18	6.0	11.4	0.0	chr3	55485745	55485779	(142809780)	+	GA-rich	Low_complexity	1	39	(0)	2580516
61	0.0	0.0	0.0	chr3	56995621	56995672	(141299887)	+	(GA)n	Simple_repeat	1	52	(0)	2583127
292	26.3	0.0	12.6	chr3	56995837	56996010	(141299549)	+	MamTip2	DNA/hAT-Tip100	154	305	(0)	2583128
2216	12.9	1.3	0.3	chr3	57998107	57998415	(140297144)	+	AluSx1	SINE/Alu	1	312	(0)	2585148
82	10.3	4.1	3.9	chr3	57998417	57998588	(140296971)	+	GA-rich	Low_complexity	1	179	(0)	2585149
322	21.8	9.6	1.2	chr3	57998589	57998674	(140296885)	+	MIRc	SINE/MIR	44	143	(87)	2585150
439	21.2	5.8	2.6	chr3	58463436	58463551	(139832008)	+	L1ME2z	LINE/L1	6318	6437	(7)	2586063
16	5.3	0.0	0.0	chr3	61560968	61560987	(136734572)	+	(A)n	Simple_repeat	1	20	(0)	2590826
464	29.6	4.4	4.8	chr3	61637262	61637467	(136658092)	+	MIR	SINE/MIR	37	241	(21)	2590971
215	29.8	8.0	3.7	chr3	63932481	63932588	(134362971)	+	L2	LINE/L2	2787	2899	(520)	2594920
382	31.2	3.6	1.6	chr3	63932827	63933018	(134362541)	C	L1ME3G	LINE/L1	(285)	639	444	2594921
365	26.0	5.8	4.3	chr3	64649324	64649462	(133646097)	+	MIRb	SINE/MIR	64	221	(47)	2596078
22	22.9	8.4	2.6	chr3	64688372	64688478	(133607081)	+	(CT)n	Simple_repeat	1	116	(0)	2596147
30	20.2	4.0	3.9	chr3	65524023	65524122	(132771437)	+	GA-rich	Low_complexity	1	104	(0)	2597552
308	15.5	3.4	4.9	chr3	70211150	70211926	(128083633)	+	(TTCCT)n	Simple_repeat	1	803	(0)	2605484
515	30.1	5.3	2.3	chr3	72848661	72848881	(125446678)	+	MIR	SINE/MIR	18	245	(17)	2610047
17	27.1	4.5	0.0	chr3	72848961	72849027	(125446532)	+	(TTTCTC)n	Simple_repeat	1	70	(0)	2610048
432	33.3	4.8	3.5	chr3	72962586	72962874	(125332685)	C	L2a	LINE/L2	(0)	3426	3134	2610304
55	15.5	5.4	1.5	chr3	81492604	81492733	(116802826)	+	(TCCT)n	Simple_repeat	1	137	(0)	2622139
2122	13.3	0.0	0.0	chr3	81492734	81493027	(116802532)	C	AluSc	SINE/Alu	(7)	302	9	2622140
125	3.7	7.0	0.9	chr3	89615174	89615372	(108680187)	+	(GAAAG)n	Simple_repeat	1	213	(0)	2632247
785	32.6	3.2	0.0	chr3	89615374	89615646	(108679913)	C	MamGypLTR3a	LTR/Gypsy	(636)	345	64	2632245
217	30.8	10.3	4.4	chr3	97680628	97680763	(100614796)	+	L2c	LINE/L2	3243	3387	(0)	2638101
184	25.0	3.5	3.5	chr3	97686869	97686926	(100608633)	+	X6A_LINE	LINE/CR1	1022	1079	(1)	2638111
333	33.3	8.7	1.3	chr3	97752162	97752395	(100543164)	C	LTR103b_Mam	LTR/ERV1?	(0)	548	296	2638206
63	24.5	4.2	4.7	chr3	99948525	99948787	(98346772)	+	G-rich	Low_complexity	1	274	(0)	2640941
1482	20.4	3.0	2.0	chr3	103722587	103722885	(94572674)	+	AluJr	SINE/Alu	2	303	(9)	2646161
319	23.0	5.4	1.1	chr3	103722886	103722908	(94572651)	+	L1MD1	LINE/L1	4384	4411	(1735)	2646160
108	5.2	4.9	0.6	chr3	103722913	103723076	(94572483)	+	(AAAGG)n	Simple_repeat	1	172	(0)	2646162
1023	23.4	4.9	1.0	chr3	103723110	103723420	(94572139)	+	L1MD1	LINE/L1	4408	4731	(1415)	2646160
7417	22.3	8.5	3.1	chr3	107619366	107621417	(90674142)	C	L1MD1	LINE/L1	(4376)	2257	84	2651131
41	12.5	0.0	2.7	chr3	113698360	113698434	(84597125)	+	(TCCTT)n	Simple_repeat	1	75	(0)	2659589
1217	17.0	6.1	1.7	chr3	113698435	113698669	(84596890)	C	AluJb	SINE/Alu	(3)	309	64	2659590
66	18.3	2.9	0.7	chr3	114454074	114454211	(83841348)	+	GA-rich	Low_complexity	1	142	(0)	2660762
432	36.9	10.0	2.8	chr3	114998382	114999140	(83296419)	C	L2	LINE/L2	(510)	2909	2090	2661509
18	19.2	0.0	2.3	chr3	114999335	114999378	(83296181)	+	GA-rich	Low_complexity	1	44	(0)	2661510
13	26.9	1.8	3.5	chr3	115147777	115147833	(83147726)	+	(CTC)n	Simple_repeat	1	58	(0)	2661720
19	22.5	1.9	0.0	chr3	121432346	121432397	(76863162)	+	(TTTCAC)n	Simple_repeat	1	53	(0)	2670378
14	25.0	4.1	0.0	chr3	122714675	122714723	(75580836)	+	GA-rich	Low_complexity	1	51	(0)	2672493
181	30.1	2.6	4.4	chr3	123395915	123396717	(74898842)	+	GA-rich	Low_complexity	1	787	(0)	2673631
355	28.3	8.6	2.1	chr3	125054680	125054820	(73240739)	C	MIRc	SINE/MIR	(30)	238	88	2676356
186	29.8	15.4	0.0	chr3	125594237	125594340	(72701219)	C	L2c	LINE/L2	(24)	3363	3241	2677361
3910	20.6	11.2	1.5	chr3	126761728	126763174	(71532385)	C	L1MB4	LINE/L1	(2570)	4174	2587	2679057
30	15.7	5.6	6.1	chr3	126763175	126763282	(71532277)	+	(CCTTT)n	Simple_repeat	1	114	(0)	2679058
1524	18.1	1.4	6.1	chr3	126763348	126763640	(71531919)	C	AluJr4	SINE/Alu	(33)	279	1	2679059
114	22.5	2.2	4.9	chr3	127045399	127045760	(71249799)	+	G-rich	Low_complexity	1	370	(0)	2679423
1220	27.0	13.4	2.1	chr3	127128512	127129339	(71166220)	C	L1ME4a	LINE/L1	(4)	6188	5250	2679556
60	0.0	2.5	2.4	chr3	128587103	128587183	(69708376)	+	(GGAAA)n	Simple_repeat	1	83	(0)	2681990
1776	17.6	3.0	8.7	chr3	128587185	128587575	(69707984)	C	MSTB	LTR/ERVL-MaLR	(56)	370	3	2681991
227	30.8	13.9	4.9	chr3	128784188	128784494	(69511065)	+	L2	LINE/L2	2433	2771	(648)	2682461
45	10.0	0.0	8.7	chr3	129218878	129218981	(69076578)	+	(TTCT)n	Simple_repeat	1	104	(0)	2683318
1032	11.9	4.2	1.2	chr3	129218984	129219143	(69076416)	C	AluSg7	SINE/Alu	(10)	299	135	2683319
2035	26.2	12.6	1.6	chr3	129453100	129453804	(68841755)	C	L2a	LINE/L2	(1673)	1746	953	2683784
991	25.3	7.8	0.9	chr3	129609828	129610150	(68685409)	+	MER113	DNA/hAT-Charlie	112	458	(63)	2684072
2141	9.6	0.3	2.2	chr3	129997887	129998024	(68297535)	C	AluSz	SINE/Alu	(176)	136	2	2684854
26	7.7	2.4	0.0	chr3	129998039	129998080	(68297479)	+	(CTTC)n	Simple_repeat	1	43	(0)	2684856
86	12.1	6.9	0.0	chr3	129998086	129998259	(68297300)	+	(CTTT)n	Simple_repeat	1	186	(0)	2684857
792	18.2	10.2	0.0	chr3	129998262	129998420	(68297139)	C	AluSx3	SINE/Alu	(1)	310	134	2684858
27	21.3	0.0	2.8	chr3	130903601	130903700	(67391859)	+	(CTTTCCC)n	Simple_repeat	1	97	(0)	2686161
40	0.0	0.0	0.0	chr3	130903701	130903737	(67391822)	+	(CCTTT)n	Simple_repeat	1	37	(0)	2686162
744	29.7	8.9	4.9	chr3	133425357	133425788	(64869771)	C	LTR78	LTR/ERV1	(3)	1301	851	2689871
13	35.3	2.6	5.0	chr3	133425795	133425910	(64869649)	+	A-rich	Low_complexity	1	119	(0)	2689872
97	16.2	5.4	0.4	chr3	133425911	133425943	(64869616)	+	GA-rich	Low_complexity	18	122	(113)	2689873
18	23.0	0.0	0.0	chr3	133425944	133425980	(64869579)	+	G-rich	Low_complexity	1	37	(0)	2689874
13	24.0	1.5	7.2	chr3	135503602	135503669	(62791890)	+	(CCTTTT)n	Simple_repeat	1	69	(0)	2692962
271	27.1	9.2	0.8	chr3	138609349	138609478	(59686081)	C	L1ME4a	LINE/L1	(16)	6108	5967	2697790
95	3.0	0.0	2.8	chr3	138609534	138609641	(59685918)	+	(CT)n	Simple_repeat	1	108	(0)	2697791
2213	10.9	0.3	1.3	chr3	138873282	138873585	(59421974)	+	AluSp	SINE/Alu	1	301	(12)	2698388
3980	9.5	5.2	2.2	chr3	138873649	138874232	(59421327)	+	LTR10E	LTR/ERV1	1	602	(31)	2698389
246	32.0	4.5	3.9	chr3	141304060	141304238	(56991321)	C	MLT1J	LTR/ERVL-MaLR	(332)	180	1	2702084
980	21.7	18.8	0.3	chr3	141304268	141304627	(56990932)	+	LTR16A	LTR/ERVL	5	446	(5)	2702085
5850	17.0	6.9	1.7	chr3	149807936	149808304	(48487255)	C	L1MA4A	LINE/L1	(3701)	2937	2508	2714242
1531	24.2	1.2	0.6	chr3	149808294	149808485	(48487074)	C	L1M3c	LINE/L1	(5797)	344	150	2714245
1671	13.6	0.0	0.8	chr3	149808486	149808727	(48486832)	C	AluSx	SINE/Alu	(7)	305	66	2714246
34	22.8	7.7	2.8	chr3	152103303	152103494	(46192065)	+	GA-rich	Low_complexity	1	201	(0)	2717714
24	32.7	3.7	4.1	chr3	155079115	155079302	(43216257)	+	GA-rich	Low_complexity	1	195	(0)	2722018
1740	16.7	0.4	0.8	chr3	155785759	155786015	(42509544)	+	AluJb	SINE/Alu	3	258	(54)	2723003
44	11.7	4.4	7.8	chr3	155786021	155786155	(42509404)	+	A-rich	Low_complexity	1	141	(0)	2723004
2270	9.2	0.3	3.4	chr3	156660981	156661273	(41634286)	+	AluSx3	SINE/Alu	1	284	(27)	2724372
27	0.0	0.0	0.0	chr3	156661274	156661299	(41634260)	+	(AAAAC)n	Simple_repeat	1	26	(0)	2724373
3648	19.1	2.0	5.4	chr3	156661300	156661779	(41633780)	+	Tigger6a	DNA/TcMar-Tigger	358	816	(267)	2724371
327	26.2	6.8	5.8	chr3	157199617	157199790	(41095769)	C	HAL1	LINE/L1	(1469)	1038	863	2725127
363	26.6	6.1	0.0	chr3	157199901	157200024	(41095535)	C	HAL1	LINE/L1	(1630)	877	746	2725127
13	10.4	6.5	0.0	chr3	157436845	157436875	(40858684)	+	(CTCTCA)n	Simple_repeat	1	33	(0)	2725503
629	22.8	1.7	0.2	chr3	160395243	160395383	(37900176)	+	MIRb	SINE/MIR	113	258	(10)	2729733
801	25.3	15.1	8.0	chr3	160395491	160395889	(37899670)	+	MLT1K	LTR/ERVL-MaLR	154	585	(10)	2729734
99	5.4	0.9	0.0	chr3	165196874	165196988	(33098571)	+	(TC)n	Simple_repeat	1	116	(0)	2735886
22	30.2	4.0	1.7	chr3	165498796	165498855	(32796704)	+	GA-rich	Low_complexity	1	61	(0)	2736319
162	0.0	0.0	0.0	chr3	165498856	165498995	(32796564)	+	(AAGGA)n	Simple_repeat	1	140	(0)	2736320
22	26.6	1.2	3.7	chr3	165498996	165499051	(32796508)	+	GA-rich	Low_complexity	25	78	(0)	2736321
566	33.9	8.6	4.4	chr3	167885346	167885755	(30409804)	+	L2c	LINE/L2	2921	3349	(38)	2739320
460	15.1	3.1	3.1	chr3	168063381	168063476	(30232083)	C	L1MC1	LINE/L1	(0)	6333	6238	2739540
18	20.9	3.5	1.7	chr3	168094173	168094229	(30201330)	+	(AATTCA)n	Simple_repeat	1	59	(0)	2739594
434	33.3	10.5	0.0	chr3	169331923	169332144	(28963415)	C	UCON31	Unknown	(0)	454	207	2741217
230	11.1	2.4	0.3	chr3	169472403	169472774	(28822785)	+	(AGGAA)n	Simple_repeat	1	381	(0)	2741356
32	20.5	7.3	1.0	chr3	169614063	169614091	(28681468)	+	(TC)n	Simple_repeat	1	46	(57)	2741557
21	13.9	0.0	0.0	chr3	169614092	169614124	(28681435)	+	(T)n	Simple_repeat	1	33	(0)	2741558
32	20.5	7.3	1.0	chr3	169614125	169614158	(28681401)	+	(TC)n	Simple_repeat	47	103	(0)	2741557
188	28.3	6.2	0.0	chr3	169795509	169795568	(28499991)	+	X9_LINE	LINE/L1	439	502	(434)	2741817
1555	15.8	2.5	4.2	chr3	170167870	170168153	(28127406)	+	AluJo	SINE/Alu	2	280	(32)	2742484
23	4.9	0.0	9.6	chr3	170168154	170168205	(28127354)	+	(AAAGG)n	Simple_repeat	1	52	(0)	2742485
1566	18.0	3.9	2.3	chr3	170180175	170180480	(28115079)	+	AluJo	SINE/Alu	1	311	(1)	2742508
16	18.9	0.0	0.0	chr3	170180551	170180580	(28114979)	+	(T)n	Simple_repeat	1	30	(0)	2742509
4851	16.3	3.1	2.7	chr3	170550887	170552209	(27743350)	C	L1MB7	LINE/L1	(22)	6162	4849	2743259
17	28.7	0.0	0.0	chr3	170716214	170716257	(27579302)	+	(CA)n	Simple_repeat	1	44	(0)	2743483
19	23.4	3.0	2.9	chr3	170716331	170716396	(27579163)	+	(TTTTC)n	Simple_repeat	1	68	(0)	2743484
719	27.9	3.7	3.0	chr3	171495092	171495390	(26800169)	+	L4_A_Mam	LINE/RTE-X	4670	4970	(20)	2744638
28	8.2	5.8	0.0	chr3	172596147	172596198	(25699361)	+	(AGAAAT)n	Simple_repeat	1	55	(0)	2746349
811	10.4	3.8	0.7	chr3	173567963	173568117	(24727442)	C	L1MA8	LINE/L1	(4)	6287	6128	2747725
42	16.5	1.1	2.2	chr3	173568130	173568234	(24727325)	+	(TTCTT)n	Simple_repeat	1	103	(0)	2747726
1974	14.4	3.9	0.3	chr3	173568236	173568534	(24727025)	C	AluSx1	SINE/Alu	(2)	310	1	2747727
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
39	9.1	2.6	3.8	chr3	173814967	173815043	(24480516)	+	(TTTTC)n	Simple_repeat	1	79	(0)	2748054
2235	8.7	4.5	0.7	chr3	173815044	173815058	(24480501)	C	AluSc8	SINE/Alu	(0)	311	298	2748055
47	8.1	0.0	0.0	chr3	173815059	173815123	(24480436)	+	(TCCT)n	Simple_repeat	1	65	(0)	2748056
2235	8.7	4.5	0.7	chr3	173815124	173815406	(24480153)	C	AluSc8	SINE/Alu	(14)	297	1	2748055
61	14.2	8.2	3.0	chr3	174352284	174352467	(23943092)	+	GA-rich	Low_complexity	1	199	(0)	2748836
852	20.3	1.0	1.0	chr3	174352468	174352661	(23942898)	C	L1MC3	LINE/L1	(1924)	5861	5668	2748833
237	32.5	10.9	6.2	chr3	177035144	177035386	(21260173)	+	L2	LINE/L2	2021	2276	(1143)	2752483
1990	14.0	0.3	0.0	chr3	177035414	177035699	(21259860)	C	AluSx1	SINE/Alu	(11)	301	15	2752484
14	15.7	2.9	9.9	chr3	179165028	179165096	(19130463)	+	(TTCCT)n	Simple_repeat	1	71	(0)	2755716
11	31.9	0.0	0.0	chr3	179450563	179450606	(18844953)	+	A-rich	Low_complexity	1	44	(0)	2756237
104	18.4	5.0	3.5	chr3	179542461	179542762	(18752797)	+	GA-rich	Low_complexity	1	317	(0)	2756410
1838	17.6	7.7	4.0	chr3	179542764	179543136	(18752423)	C	MSTB	LTR/ERVL-MaLR	(35)	391	4	2756411
19496	12.7	2.5	1.6	chr3	179547957	179549677	(18745882)	+	L1M1	LINE/L1	2301	4029	(3536)	2756418
16	12.6	5.6	0.0	chr3	181712034	181712069	(16583490)	+	GA-rich	Low_complexity	1	38	(0)	2759750
544	27.6	6.4	4.8	chr3	181948080	181948479	(16347080)	C	L1ME4a	LINE/L1	(2)	6122	5716	2760294
207	32.5	13.0	1.2	chr3	181948509	181948670	(16346889)	+	MER5A	DNA/hAT-Charlie	5	188	(1)	2760295
182	35.6	5.5	8.1	chr3	182825025	182825247	(15470312)	+	L2c	LINE/L2	2925	3141	(246)	2761630
777	10.7	3.8	3.0	chr3	183699432	183699562	(14595997)	+	FLAM_C	SINE/Alu	1	132	(11)	2763199
1059	28.4	16.1	3.2	chr3	183699563	183699872	(14595687)	C	L2	LINE/L2	(1077)	2342	2001	2763198
2943	22.3	5.9	0.2	chr3	184073453	184074072	(14221487)	C	ERVL-E-int	LTR/ERVL	(262)	5405	4748	2763944
4011	12.4	4.3	2.0	chr3	184074086	184074490	(14221069)	+	Tigger1	DNA/TcMar-Tigger	593	1017	(1401)	2763945
12	23.0	2.0	4.0	chr3	184805944	184805992	(13489567)	+	(TGAA)n	Simple_repeat	1	50	(0)	2765366
386	10.0	1.6	0.0	chr3	185522314	185522373	(12773186)	C	LTR32	LTR/ERVL	(383)	74	14	2766536
226	23.4	8.6	1.5	chr3	185522366	185522430	(12773129)	C	SVA_B	Retroposon/SVA	(1191)	192	123	2766537
414	12.9	0.0	0.0	chr3	185522373	185522437	(12773122)	+	FLAM_C	SINE/Alu	12	76	(225)	2766538
116	16.0	2.3	3.7	chr3	185522440	185522703	(12772856)	+	GA-rich	Low_complexity	1	270	(0)	2766539
548	33.6	6.8	7.4	chr3	185859490	185859785	(12435774)	+	L2b	LINE/L2	3081	3374	(1)	2767239
572	27.8	3.2	4.1	chr3	186566383	186566600	(11728959)	C	MIRb	SINE/MIR	(8)	260	45	2768576
19	29.3	0.0	6.3	chr3	186615143	186615237	(11680322)	+	A-rich	Low_complexity	1	95	(0)	2768661
16	9.4	10.6	1.9	chr3	186783214	186783260	(11512299)	+	(CTCCGG)n	Simple_repeat	1	52	(0)	2768981
199	22.0	9.2	0.0	chr3	188155414	188155472	(10140087)	C	UCON132b	DNA/hAT-Tip100	(35)	113	49	2771378
39	16.4	6.9	0.0	chr3	190119831	190119932	(8175627)	+	G-rich	Low_complexity	1	109	(0)	2774608
56	23.6	3.0	3.9	chr3	190862283	190862482	(7433077)	+	GA-rich	Low_complexity	1	198	(0)	2775747
448	31.5	1.2	2.9	chr3	191239740	191239909	(7055650)	+	LTR79	LTR/ERVL	34	200	(327)	2776253
395	35.7	8.0	2.1	chr3	191338419	191338701	(6956858)	C	MamRTE1	LINE/RTE-BovB	(99)	3713	3413	2776391
114	8.6	4.4	4.2	chr3	192013191	192013419	(6282140)	+	(TTTC)n	Simple_repeat	1	239	(0)	2777296
36	22.9	4.4	4.2	chr3	192187741	192187878	(6107681)	+	A-rich	Low_complexity	1	138	(0)	2777524
2132	25.0	5.4	1.9	chr3	192554518	192555339	(5740220)	+	L1MC1	LINE/L1	1150	2137	(4516)	2778087
1166	25.4	11.3	1.9	chr3	192567499	192567735	(5727824)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	200	2778104
376	31.9	3.2	5.4	chr3	193596161	193596387	(4699172)	C	L1M5	LINE/L1	(1207)	1258	1123	2779743
204	33.9	2.7	5.2	chr3	194274908	194275022	(4020537)	C	L2c	LINE/L2	(4)	3383	3272	2780862
307	29.4	12.2	8.4	chr3	194275028	194275468	(4020091)	C	L2c	LINE/L2	(5)	3382	2923	2780863
277	35.2	3.5	3.2	chr3	194350102	194350308	(3945251)	+	L2b	LINE/L2	3168	3374	(1)	2780980
572	30.7	1.0	6.4	chr3	194350403	194350621	(3944938)	+	MIRb	SINE/MIR	55	261	(7)	2780982
1628	5.7	15.4	5.3	chr3	195894427	195894688	(2400871)	C	AluSx1	SINE/Alu	(19)	293	1	2783801
1661	12.8	0.3	9.1	chr3	196217251	196217570	(2077989)	+	AluJb	SINE/Alu	20	311	(1)	2784519
48	14.8	5.8	5.5	chr3	196217571	196217725	(2077834)	+	GA-rich	Low_complexity	1	164	(0)	2784520
197	23.3	3.2	4.8	chr3	196284557	196284619	(2010940)	C	L3	LINE/CR1	(3278)	821	760	2784654
3155	17.9	6.7	1.5	chr3	196501035	196501716	(1793843)	+	L1MB5	LINE/L1	5438	6157	(17)	2785172
628	25.9	2.2	2.8	chr3	196586684	196586862	(1708697)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	2785342
295	21.4	4.4	10.3	chr3	196586876	196587021	(1708538)	+	MIRc	SINE/MIR	122	258	(10)	2785343
311	29.6	5.6	3.6	chr3	197604379	197604518	(691041)	+	MIRb	SINE/MIR	78	220	(48)	2787206
81	4.1	2.1	6.2	chr3	197996963	197997121	(298438)	+	(TTCTT)n	Simple_repeat	1	152	(0)	2787966
1615	18.6	4.2	3.6	chr3	197997125	197997430	(298129)	C	AluJb	SINE/Alu	(3)	309	2	2787967
529	25.2	18.9	0.6	chr4	508064	508387	(189706168)	C	L2a	LINE/L2	(53)	3373	2977	2789198
2034	12.0	0.0	0.0	chr4	1648832	1649105	(188565450)	+	AluSq	SINE/Alu	2	275	(38)	2790404
84	18.3	0.5	2.7	chr4	1649106	1649283	(188565272)	+	A-rich	Low_complexity	7	180	(0)	2790405
1587	19.7	4.4	1.7	chr4	2237174	2237462	(187977093)	+	AluJr4	SINE/Alu	13	309	(3)	2791304
30	15.9	1.1	7.6	chr4	2237464	2237554	(187977001)	+	GA-rich	Low_complexity	1	92	(0)	2791305
283	26.8	14.9	2.5	chr4	2237557	2237755	(187976800)	+	MIRc	SINE/MIR	26	253	(15)	2791306
542	12.8	0.0	1.3	chr4	3135258	3135335	(187079220)	+	AluSc	SINE/Alu	216	292	(17)	2792822
279	17.8	1.0	2.5	chr4	3725988	3726575	(186487980)	+	G-rich	Low_complexity	1	594	(0)	2793525
925	20.6	8.9	0.0	chr4	6561255	6561458	(183653097)	+	MER45C	DNA/hAT-Tip100	730	953	(0)	2798611
136	19.9	1.5	5.9	chr4	7190236	7190635	(183023920)	+	(TCCT)n	Simple_repeat	1	406	(0)	2799777
251	16.2	1.1	0.4	chr4	7662921	7663377	(182551178)	+	(GTGA)n	Simple_repeat	1	462	(0)	2800506
148	14.5	5.4	1.7	chr4	7868919	7869251	(182345304)	+	GA-rich	Low_complexity	1	351	(0)	2800809
191	24.1	0.7	0.9	chr4	8608983	8609444	(181605111)	+	(CACT)n	Simple_repeat	1	465	(0)	2802018
188	4.2	4.9	6.0	chr4	10787285	10787649	(179426906)	+	(CTTT)n	Simple_repeat	1	383	(0)	2805108
3234	15.3	2.9	0.2	chr4	13640147	13640651	(176573904)	C	LTR72	LTR/ERV1	(0)	519	1	2809621
16	5.3	0.0	0.0	chr4	20354209	20354228	(169860327)	+	(T)n	Simple_repeat	1	20	(0)	2820846
71	9.8	2.8	4.7	chr4	30974146	30974290	(159240265)	+	(TTCT)n	Simple_repeat	1	149	(0)	2837432
519	30.2	15.1	2.0	chr4	38506094	38506438	(151708117)	+	HAL1	LINE/L1	202	599	(1908)	2847898
465	27.5	6.5	6.5	chr4	39905582	39905761	(150308794)	+	HAL1	LINE/L1	837	1019	(1488)	2850727
23	26.3	5.5	2.6	chr4	39905779	39905888	(150308667)	+	A-rich	Low_complexity	1	116	(0)	2850729
17	20.2	0.0	0.0	chr4	39905929	39905962	(150308593)	+	A-rich	Low_complexity	1	34	(0)	2850729
1698	26.0	7.2	0.4	chr4	39931324	39931817	(150282738)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	11	2850782
311	33.0	0.8	4.8	chr4	40173652	40173775	(150040780)	C	MamRep1894	DNA/hAT	(3)	120	2	2851417
19	27.0	2.0	6.0	chr4	40173791	40173888	(150040667)	+	(TTTTC)n	Simple_repeat	1	100	(0)	2851418
15	17.2	6.1	1.9	chr4	40173844	40173892	(150040663)	+	(TCTTCTTT)n	Simple_repeat	1	52	(0)	2851419
424	25.1	10.2	1.2	chr4	40631692	40631852	(149582703)	C	MIRc	SINE/MIR	(0)	268	92	2852469
1108	24.1	10.8	3.7	chr4	47915020	47915507	(142299048)	C	LTR24B	LTR/ERV1	(61)	515	1	2862969
5523	19.4	4.6	3.6	chr4	48276343	48276939	(141937616)	+	L1MD1	LINE/L1	551	1368	(5265)	2863605
2269	9.3	0.0	0.4	chr4	48276940	48277248	(141937307)	+	AluSc	SINE/Alu	1	309	(0)	2863606
1586	13.7	5.1	3.3	chr4	55397741	55398011	(134816544)	C	AluJo	SINE/Alu	(6)	306	31	2870821
460	33.2	7.0	1.0	chr4	55398105	55398305	(134816250)	+	L3	LINE/CR1	3844	4057	(42)	2870822
41	30.5	3.5	3.4	chr4	56505866	56506094	(133708461)	+	A-rich	Low_complexity	1	237	(0)	2872718
1059	33.5	24.4	2.6	chr4	56981668	56982278	(133232277)	+	L2	LINE/L2	1788	2523	(896)	2873758
13	16.2	0.0	5.3	chr4	57079599	57079636	(133134919)	+	GA-rich	Low_complexity	1	38	(0)	2873925
347	24.0	11.8	5.7	chr4	70558355	70558513	(119656042)	+	MIRc	SINE/MIR	60	229	(39)	2890751
2505	11.5	0.0	0.3	chr4	70716562	70716875	(119497680)	+	AluSq2	SINE/Alu	1	313	(0)	2891041
652	26.6	9.8	5.9	chr4	70716876	70717173	(119497382)	+	L1ME3F	LINE/L1	5868	6191	(52)	2891038
2286	6.3	8.3	0.0	chr4	71005844	71006129	(119208426)	+	AluSq2	SINE/Alu	1	312	(1)	2891643
14	24.7	1.8	1.8	chr4	71006130	71006169	(119208386)	+	A-rich	Low_complexity	15	54	(0)	2891644
16	20.3	2.1	2.1	chr4	73249237	73249283	(116965272)	+	(TTCTT)n	Simple_repeat	1	48	(0)	2894639
159	10.8	1.0	5.4	chr4	73636544	73636853	(116577702)	+	A-rich	Low_complexity	1	313	(0)	2895150
6185	15.7	2.2	1.4	chr4	73636854	73638843	(116575712)	+	L1PB3	LINE/L1	4921	6923	(0)	2895149
168	1.2	1.2	1.2	chr4	80015835	80016004	(110198551)	+	(AAGGA)n	Simple_repeat	1	172	(0)	2904279
303	27.7	2.5	0.0	chr4	80016048	80016166	(110198389)	C	Charlie18a	DNA/hAT-Charlie	(152)	190	69	2904280
59	14.1	3.2	2.3	chr4	83128405	83128413	(107086142)	+	(CTTTCC)n	Simple_repeat	1	25	(105)	2908917
20	12.2	14.1	2.1	chr4	83128414	83128498	(107086057)	+	(TCCT)n	Simple_repeat	1	97	(0)	2908918
59	14.1	3.2	2.3	chr4	83128499	83128530	(107086025)	+	(CTTTCC)n	Simple_repeat	26	130	(0)	2908917
959	21.0	0.0	0.6	chr4	83128531	83128697	(107085858)	C	AluJb	SINE/Alu	(13)	299	134	2908919
42	11.0	5.3	5.8	chr4	86973706	86973819	(103240736)	+	(TTTTC)n	Simple_repeat	1	120	(0)	2914721
40	25.8	4.5	8.0	chr4	87069357	87069666	(103144889)	+	(TTCC)n	Simple_repeat	1	324	(0)	2914867
30	28.9	4.5	6.2	chr4	87429554	87429817	(102784738)	+	(TTTTCC)n	Simple_repeat	1	276	(0)	2915496
215	29.8	10.9	3.4	chr4	87465670	87465787	(102748768)	C	L2a	LINE/L2	(0)	3426	3299	2915568
17	15.1	4.3	2.1	chr4	87465993	87466038	(102748517)	+	A-rich	Low_complexity	1	48	(0)	2915569
811	18.9	0.0	0.0	chr4	88439228	88439359	(101775196)	+	FLAM_A	SINE/Alu	1	132	(10)	2917183
35	20.2	4.3	1.0	chr4	88439360	88439468	(101775087)	+	A-rich	Low_complexity	1	112	(0)	2917184
517	31.1	0.6	1.8	chr4	88439488	88439651	(101774904)	C	L2a	LINE/L2	(475)	2944	2783	2917180
28	0.0	2.9	2.8	chr4	98336873	98336907	(91877648)	+	(GTTTT)n	Simple_repeat	1	36	(0)	2930027
653	32.0	11.1	1.3	chr4	98963593	98963966	(91250589)	+	LTR88b	LTR/Gypsy?	7	421	(416)	2931039
14153	12.7	3.6	4.9	chr4	99053553	99055108	(91159447)	C	Tigger1	DNA/TcMar-Tigger	(833)	1585	54	2931188
18	8.5	0.0	0.0	chr4	102502333	102502357	(87712198)	+	(CT)n	Simple_repeat	1	25	(0)	2935762
116	18.1	6.0	2.7	chr4	102625199	102625545	(87589010)	+	(CTTTCT)n	Simple_repeat	1	368	(0)	2935928
194	20.4	5.3	0.0	chr4	102868710	102868763	(87345792)	C	MIRc	SINE/MIR	(14)	254	198	2936282
18	17.6	4.8	7.3	chr4	105423927	105424011	(84790544)	+	GA-rich	Low_complexity	1	82	(0)	2939444
315	33.3	13.4	2.0	chr4	106313438	106313734	(83900821)	+	HAL1ME	LINE/L1	1586	1921	(586)	2940638
382	31.1	10.7	5.1	chr4	106313922	106314351	(83900204)	+	HAL1ME	LINE/L1	1864	2320	(145)	2940645
341	28.4	10.2	4.4	chr4	110061139	110061341	(80153214)	+	L2	LINE/L2	2835	3050	(369)	2945910
27	19.9	3.5	3.4	chr4	110636976	110637061	(79577494)	+	(TCTC)n	Simple_repeat	1	89	(0)	2946880
12	29.6	3.0	2.9	chr4	111992771	111992836	(78221719)	+	A-rich	Low_complexity	1	68	(0)	2948518
236	24.6	0.0	0.0	chr4	112297079	112297139	(77917416)	C	Charlie2b	DNA/hAT-Charlie	(2147)	635	575	2948996
431	23.0	21.6	1.1	chr4	112352708	112352878	(77861677)	C	L1ME3D	LINE/L1	(265)	5977	5773	2949058
24	20.2	1.2	6.2	chr4	112352879	112352958	(77861597)	+	(CCTT)n	Simple_repeat	1	81	(0)	2949060
2032	16.0	0.3	1.6	chr4	112352962	112353274	(77861281)	C	AluJb	SINE/Alu	(3)	309	1	2949061
20	18.1	4.0	0.0	chr4	112818976	112819025	(77395530)	+	(TGTT)n	Simple_repeat	1	52	(0)	2949946
1739	18.4	11.2	11.0	chr4	114918556	114918905	(75295650)	+	MER101B	LTR/ERV1	172	519	(51)	2952627
3891	17.4	0.8	1.7	chr4	114921992	114922703	(75291852)	+	MER50	LTR/ERV1	1	706	(28)	2952632
19	20.8	0.0	0.0	chr4	118888870	118888913	(71325642)	+	(GGC)n	Simple_repeat	1	44	(0)	2957660
8283	3.5	0.0	30.5	chr4	123015184	123017176	(67197379)	C	SVA_D	Retroposon/SVA	(0)	1386	1	2963349
65	7.3	3.0	0.0	chr4	123017179	123017278	(67197277)	+	(GGGAGA)n	Simple_repeat	1	103	(0)	2963350
16	10.0	0.0	0.0	chr4	123017357	123017378	(67197177)	+	(T)n	Simple_repeat	1	22	(0)	2963351
37	0.0	0.0	0.0	chr4	123017415	123017448	(67197107)	+	(T)n	Simple_repeat	1	34	(0)	2963351
2437	8.9	0.3	0.0	chr4	123399095	123399386	(66815169)	+	AluSx	SINE/Alu	1	293	(19)	2963911
352	22.5	8.8	2.9	chr4	125180360	125180473	(65034082)	+	AluJb	SINE/Alu	6	209	(93)	2966277
156	17.1	1.9	4.2	chr4	125180474	125180844	(65033711)	+	GA-rich	Low_complexity	1	378	(0)	2966278
14	11.6	0.0	3.3	chr4	137510988	137511017	(52703538)	+	(TTTTG)n	Simple_repeat	1	30	(0)	2981756
76	28.6	2.2	5.8	chr4	139163907	139164274	(51050281)	+	GA-rich	Low_complexity	1	376	(0)	2984068
12	14.4	3.0	2.9	chr4	143382435	143382467	(46832088)	+	(TTGCTT)n	Simple_repeat	1	34	(0)	2990251
17	19.7	2.8	0.0	chr4	145938133	145938168	(44276387)	+	GA-rich	Low_complexity	1	37	(0)	2993606
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
1657	11.4	1.9	0.0	chr4	151165144	151165353	(39049202)	+	AluSx4	SINE/Alu	83	296	(14)	3000989
35	7.1	5.1	0.0	chr4	151165354	151165414	(39049141)	+	(AAGGGA)n	Simple_repeat	1	64	(0)	3000990
1809	17.6	1.7	0.0	chr4	152019937	152020220	(38194335)	+	AluJb	SINE/Alu	1	289	(23)	3002330
15	9.7	0.0	0.0	chr4	152020221	152020242	(38194313)	+	(GA)n	Simple_repeat	1	22	(0)	3002331
82	0.0	0.0	2.4	chr4	152020244	152020325	(38194230)	+	(GAAAG)n	Simple_repeat	1	82	(0)	3002332
490	36.5	16.2	2.2	chr4	152493854	152494582	(37719973)	C	L2c	LINE/L2	(1351)	2068	1204	3003055
825	16.5	0.0	0.0	chr4	153433471	153433585	(36780970)	+	FLAM_A	SINE/Alu	16	130	(12)	3004650
12	14.6	0.0	5.9	chr4	153433657	153433690	(36780865)	+	A-rich	Low_complexity	1	34	(0)	3004651
12	31.6	3.2	1.5	chr4	155615414	155615476	(34599079)	+	(TTTTTA)n	Simple_repeat	1	65	(0)	3007683
2233	20.0	1.4	0.2	chr4	155679299	155679725	(34534830)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3007778
58	38.5	3.0	3.6	chr4	159748960	159749366	(30465189)	+	(TCTTT)n	Simple_repeat	1	419	(0)	3013312
262	28.8	1.4	0.0	chr4	173327064	173327136	(16887419)	C	L2a	LINE/L2	(47)	3379	3306	3031439
2849	20.0	1.6	1.0	chr4	175859886	175860568	(14353987)	+	L1MCa	LINE/L1	2999	3685	(2636)	3034746
426	32.8	3.6	8.5	chr4	176210332	176210672	(14003883)	C	L2c	LINE/L2	(64)	3323	3015	3035236
79	12.6	3.9	3.8	chr4	176210710	176210888	(14003667)	+	(CTTT)n	Simple_repeat	1	186	(0)	3035237
99	17.1	3.8	4.0	chr4	179492494	179492758	(10721797)	+	(CTTTC)n	Simple_repeat	1	275	(0)	3039594
1153	22.8	8.8	0.3	chr4	179492781	179493093	(10721462)	+	MLT1D	LTR/ERVL-MaLR	164	505	(0)	3039592
3231	18.4	3.4	1.4	chr4	179663065	179663708	(10550847)	C	MER6	DNA/TcMar-Tigger	(0)	865	209	3039798
204	15.6	6.8	3.2	chr4	179663723	179664312	(10550243)	+	(CACTCA)n	Simple_repeat	1	630	(0)	3039799
343	29.9	1.7	0.0	chr4	180164947	180165063	(10049492)	C	MIRc	SINE/MIR	(140)	128	10	3040410
312	30.1	2.7	3.0	chr4	180565887	180567328	(9647227)	+	(GTGTGG)n	Simple_repeat	1	1481	(0)	3040930
13	5.3	0.0	0.0	chr4	182207941	182207960	(8006595)	+	(TGC)n	Simple_repeat	1	20	(0)	3043104
1298	22.9	6.8	5.3	chr4	183132753	183132939	(7081616)	C	L1MEd	LINE/L1	(2227)	3919	3739	3044455
46	28.0	3.5	1.7	chr4	183132992	183133146	(7081409)	+	(TTTTC)n	Simple_repeat	1	158	(0)	3044457
831	20.6	1.2	3.5	chr4	183133147	183133316	(7081239)	C	FRAM	SINE/Alu	(8)	168	3	3044458
32	3.7	1.5	8.8	chr4	183407631	183407697	(6806858)	+	(TCTTT)n	Simple_repeat	1	68	(0)	3044895
465	32.2	9.5	6.6	chr4	183407704	183408082	(6806473)	C	L1MC4	LINE/L1	(4879)	1336	946	3044896
390	14.4	6.2	2.0	chr4	184219631	184220549	(5994006)	+	G-rich	Low_complexity	1	976	(0)	3046203
230	30.8	4.6	2.0	chr5	1641539	1641687	(179896572)	+	L1MEg	LINE/L1	508	660	(5424)	3056482
471	28.2	11.4	3.0	chr5	1816911	1817216	(179721043)	+	L1MEj	LINE/L1	961	1519	(946)	3056680
5665	6.8	3.5	2.1	chr5	7664468	7665222	(173873037)	+	MER4E	LTR/ERV1	1	766	(0)	3063449
252	31.9	13.0	3.9	chr5	8660085	8660459	(172877800)	+	L2a	LINE/L2	2921	3411	(15)	3064626
290	5.4	3.6	0.2	chr5	9353018	9353428	(172184831)	+	(GAAAG)n	Simple_repeat	1	426	(0)	3065407
414	24.0	2.3	3.0	chr5	10310787	10310919	(171227340)	C	L1MC5a	LINE/L1	(0)	2777	2646	3066666
1716	13.2	0.4	0.0	chr5	10328724	10328958	(171209301)	C	AluSq	SINE/Alu	(14)	299	64	3066712
243	33.0	0.0	1.0	chr5	10432084	10432181	(171106078)	+	CR1_Mam	LINE/CR1	1549	1645	(559)	3066884
240	32.8	7.2	0.0	chr5	10432198	10432325	(171105934)	C	MIRb	SINE/MIR	(6)	262	125	3066885
2135	11.0	4.3	0.0	chr5	10432900	10433189	(171105070)	C	AluSx	SINE/Alu	(9)	303	1	3066886
46	9.9	4.3	2.1	chr5	10577051	10577130	(170961129)	+	(CCTTTC)n	Simple_repeat	1	82	(0)	3067169
2206	10.6	2.3	0.0	chr5	10577131	10577422	(170960837)	C	AluSq2	SINE/Alu	(14)	299	1	3067170
2479	11.1	2.6	3.1	chr5	10596148	10596538	(170941721)	C	L1PA11	LINE/L1	(0)	6174	5786	3067205
237	21.7	6.8	0.0	chr5	10607031	10607099	(170931160)	C	Charlie18a	DNA/hAT-Charlie	(139)	203	130	3067226
1010	27.8	4.1	3.0	chr5	10607174	10607536	(170930723)	C	MLT1I	LTR/ERVL-MaLR	(5)	406	40	3067227
769	29.1	3.0	0.0	chr5	14132220	14132446	(167405813)	+	LTR33	LTR/ERVL	1	234	(281)	3071840
394	30.4	9.7	8.1	chr5	14146482	14146764	(167391495)	+	L3	LINE/CR1	3808	4095	(4)	3071861
2278	7.7	2.0	1.3	chr5	14159566	14159864	(167378395)	C	AluSc5	SINE/Alu	(8)	301	1	3071879
25	28.1	4.9	1.6	chr5	16699011	16699133	(164839126)	+	(GAGACA)n	Simple_repeat	1	129	(0)	3075359
131	14.7	1.6	5.2	chr5	16796212	16796515	(164741744)	+	GA-rich	Low_complexity	1	309	(0)	3075542
238	21.7	1.6	7.7	chr5	16934328	16934392	(164603867)	+	Charlie24	DNA/hAT-Charlie	2390	2450	(0)	3075811
754	30.6	7.6	0.4	chr5	16977940	16978402	(164559857)	+	HAL1b	LINE/L1	884	1382	(1039)	3075926
47	31.3	1.1	3.3	chr5	16978440	16978620	(164559639)	+	(CTTT)n	Simple_repeat	1	183	(0)	3075930
1051	18.6	0.0	1.7	chr5	16978621	16978797	(164559462)	C	AluJb	SINE/Alu	(6)	306	133	3075931
48	27.7	0.0	0.0	chr5	17400682	17400815	(164137444)	+	(ACACAC)n	Simple_repeat	1	134	(0)	3076778
882	22.9	0.8	8.3	chr5	18746066	18746356	(162791903)	C	LTR12F	LTR/ERV1	(98)	682	237	3078461
12	6.9	9.1	2.8	chr5	23013162	23013194	(158525065)	+	A-rich	Low_complexity	1	36	(0)	3084206
673	24.8	2.2	11.3	chr5	25569027	25569327	(155968932)	C	LTR12F	LTR/ERV1	(95)	685	237	3087482
747	22.1	2.8	7.1	chr5	27472488	27472711	(154065548)	+	MER61-int	LTR/ERV1	2	215	(5002)	3089960
26855	14.1	3.7	2.8	chr5	27472715	27477542	(154060717)	+	MER61-int	LTR/ERV1	343	5213	(4)	3089960
102	21.6	5.2	3.9	chr5	28017183	28017502	(153520757)	+	GA-rich	Low_complexity	1	323	(0)	3090627
220	30.9	3.0	5.8	chr5	28017507	28017609	(153520650)	+	L2a	LINE/L2	2500	2599	(820)	3090628
39	8.6	2.3	6.7	chr5	31583268	31583368	(149954891)	+	GA-rich	Low_complexity	1	96	(0)	3095175
13	18.1	0.0	0.0	chr5	31583436	31583446	(149954813)	+	(TATGTG)n	Simple_repeat	1	11	(0)	3095176
608	27.4	12.8	1.0	chr5	32158888	32159093	(149379166)	C	MIRb	SINE/MIR	(10)	258	25	3096284
2410	4.4	0.4	0.0	chr5	32175493	32175793	(149362466)	C	AluY	SINE/Alu	(0)	311	6	3096325
5661	17.4	4.7	4.8	chr5	32339126	32340078	(149198181)	C	MER57-int	LTR/ERV1	(3711)	3826	2773	3096642
200	34.4	2.0	1.0	chr5	34490522	34490618	(147047641)	C	MIRc	SINE/MIR	(125)	143	46	3099855
14	19.3	0.0	4.9	chr5	34658441	34658481	(146879778)	+	(CCTC)n	Simple_repeat	1	41	(0)	3100176
1322	16.2	8.6	1.0	chr5	34695455	34695753	(146842506)	+	MER33	DNA/hAT-Charlie	1	324	(0)	3100242
1803	16.7	0.0	4.4	chr5	34695799	34696115	(146842144)	C	AluJr	SINE/Alu	(5)	307	5	3100243
16	0.0	0.0	0.0	chr5	36415016	36415032	(145123227)	+	(A)n	Simple_repeat	1	17	(0)	3102755
307	26.2	2.3	0.0	chr5	36859264	36859347	(144678912)	C	L1ME4a	LINE/L1	(2)	6122	6037	3103460
1157	18.5	4.4	5.6	chr5	37055734	37055965	(144482294)	+	AluJo	SINE/Alu	1	229	(83)	3103758
29	27.8	4.5	0.9	chr5	37056970	37057079	(144481180)	+	(CT)n	Simple_repeat	1	115	(0)	3103759
2231	12.2	0.3	0.3	chr5	37514739	37515041	(144023218)	+	AluJb	SINE/Alu	5	307	(5)	3104681
453	32.2	7.4	14.7	chr5	37515042	37515435	(144022824)	C	L2b	LINE/L2	(669)	2750	2369	3104677
419	30.6	4.9	0.0	chr5	38561020	38561192	(142977067)	C	L4_C_Mam	LINE/RTE-X	(192)	4946	4765	3106300
367	22.1	0.0	1.0	chr5	38561401	38561496	(142976763)	+	MIR	SINE/MIR	119	213	(49)	3106301
3975	13.1	2.3	2.5	chr5	38660105	38660746	(142877513)	+	LTR9D	LTR/ERV1	5	645	(0)	3106453
130	2.4	6.4	0.6	chr5	38832047	38832217	(142706042)	+	(CT)n	Simple_repeat	1	182	(0)	3106749
2089	11.3	12.9	5.6	chr5	38929777	38930205	(142608054)	+	MER4C	LTR/ERV1	1	465	(0)	3106862
11	15.9	0.0	9.3	chr5	39016542	39016584	(142521675)	+	A-rich	Low_complexity	1	43	(0)	3106960
80	0.0	0.0	0.0	chr5	39075285	39075352	(142462907)	+	(AC)n	Simple_repeat	1	68	(0)	3107043
339	37.4	3.7	3.0	chr5	39075437	39075571	(142462688)	+	L2b	LINE/L2	3240	3375	(0)	3107044
36	25.5	4.8	0.0	chr5	40667420	40667524	(140870735)	+	(CT)n	Simple_repeat	1	110	(0)	3109243
2090	22.3	8.7	11.2	chr5	40757233	40757847	(140780412)	+	Charlie1a	DNA/hAT-Charlie	259	832	(623)	3109367
1006	23.9	19.8	1.4	chr5	40823528	40823963	(140714296)	+	LTR41	LTR/ERVL	225	760	(8)	3109496
2106	10.1	1.7	0.0	chr5	43008369	43008655	(138529604)	C	AluSz	SINE/Alu	(20)	292	1	3112397
22	18.0	1.9	1.9	chr5	43014774	43014826	(138523433)	+	(TCCT)n	Simple_repeat	1	54	(0)	3112411
229	35.8	12.4	1.2	chr5	43512254	43512669	(138025590)	+	L2a	LINE/L2	1743	2211	(1208)	3113201
180	31.1	8.6	2.8	chr5	52787192	52787300	(128750959)	+	MamRTE1	LINE/RTE-BovB	2665	2780	(1032)	3119413
42	0.0	0.0	0.0	chr5	52794501	52794536	(128743723)	+	(AC)n	Simple_repeat	1	36	(0)	3119421
21	13.4	0.0	0.0	chr5	52794652	52794684	(128743575)	+	(A)n	Simple_repeat	1	33	(0)	3119422
17	25.6	2.3	0.0	chr5	53007489	53007532	(128530727)	+	GA-rich	Low_complexity	1	45	(0)	3119716
1617	20.6	3.1	4.8	chr5	53008072	53008468	(128529791)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3119717
162	2.2	1.5	3.5	chr5	53172247	53172446	(128365813)	+	(TTTCC)n	Simple_repeat	1	203	(0)	3119925
261	34.4	4.7	3.9	chr5	53580512	53580638	(127957621)	+	L2b	LINE/L2	2362	2489	(930)	3120478
76	10.4	3.3	6.5	chr5	53580646	53580825	(127957434)	+	(TTTC)n	Simple_repeat	1	186	(0)	3120483
2252	12.4	1.9	0.0	chr5	53580827	53581132	(127957127)	C	AluSp	SINE/Alu	(1)	312	1	3120484
17	11.8	2.6	2.5	chr5	54212342	54212381	(127325878)	+	G-rich	Low_complexity	1	40	(0)	3121371
231	21.7	25.8	3.4	chr5	54212535	54212653	(127325606)	C	MLT1L	LTR/ERVL-MaLR	(452)	158	4	3121372
308	33.6	0.9	0.0	chr5	54520572	54520678	(127017581)	C	L3	LINE/CR1	(125)	3974	3867	3121858
2452	9.1	0.0	0.7	chr5	56124497	56124805	(125413454)	C	AluSg	SINE/Alu	(3)	307	1	3124516
13	21.6	3.9	3.7	chr5	57178829	57178880	(124359379)	+	(CTTTT)n	Simple_repeat	1	54	(0)	3126304
315	33.3	10.0	3.2	chr5	57178962	57179147	(124359112)	C	MIR	SINE/MIR	(60)	202	3	3126305
1976	13.2	0.7	1.7	chr5	57180125	57180419	(124357840)	C	AluSx1	SINE/Alu	(20)	292	1	3126308
476	29.4	17.7	1.4	chr5	59092608	59092824	(122445435)	+	MIR	SINE/MIR	2	261	(1)	3129035
423	35.6	13.7	5.8	chr5	59092927	59093513	(122444746)	+	HAL1	LINE/L1	1	641	(1866)	3129036
21	4.0	0.0	0.0	chr5	59126108	59126133	(122412126)	+	(AG)n	Simple_repeat	1	26	(0)	3129090
40	21.7	1.0	2.0	chr5	59126134	59126196	(122412063)	+	A-rich	Low_complexity	14	100	(0)	3129091
32	0.0	0.0	0.0	chr5	59133984	59134013	(122404246)	+	(TTG)n	Simple_repeat	1	30	(0)	3129104
249	25.2	2.4	12.1	chr5	59134014	59134154	(122404105)	+	LTR16D	LTR/ERVL	397	607	(44)	3129103
2832	16.6	4.7	4.3	chr5	60943354	60943953	(120594306)	+	Tigger6a	DNA/TcMar-Tigger	94	695	(388)	3131564
216	10.5	2.6	5.0	chr5	61468029	61468068	(120070191)	C	L2c	LINE/L2	(12)	3375	3337	3132313
604	26.7	8.0	4.2	chr5	61468035	61468249	(120070010)	C	MIRb	SINE/MIR	(15)	253	30	3132314
250	17.0	4.8	0.8	chr5	61731271	61731834	(119806425)	+	GA-rich	Low_complexity	1	591	(0)	3132721
1004	27.2	7.3	10.3	chr5	62365532	62366246	(119172013)	C	L1MEb	LINE/L1	(5446)	754	92	3133638
12	12.8	5.6	2.6	chr5	65480646	65480681	(116057578)	+	(CCTCACT)n	Simple_repeat	1	38	(0)	3137886
12	22.1	0.0	0.0	chr5	66170550	66170581	(115367678)	+	(TTTA)n	Simple_repeat	1	32	(0)	3139051
13394	13.8	5.5	4.0	chr5	66940072	66942218	(114596041)	C	Tigger1	DNA/TcMar-Tigger	(173)	2245	28	3140156
31	18.8	0.0	0.0	chr5	67281991	67282053	(114256206)	+	(CCCTTCC)n	Simple_repeat	1	63	(0)	3140611
23	26.6	5.0	4.0	chr5	67282054	67282107	(114256152)	+	(TTTCCTT)n	Simple_repeat	3	125	(0)	3140612
131	22.1	3.4	4.0	chr5	67339120	67339550	(114198709)	+	(CTTT)n	Simple_repeat	1	428	(0)	3140683
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
999	27.0	6.8	5.4	chr5	71788731	71789540	(109748719)	C	L2a	LINE/L2	(1)	3425	2558	3148075
23	0.0	0.0	0.0	chr5	72248670	72248694	(109289565)	+	(A)n	Simple_repeat	1	25	(0)	3148681
642	24.4	10.1	1.9	chr5	72307678	72307886	(109230373)	+	L1ME3A	LINE/L1	5944	6171	(2)	3148781
211	33.3	1.4	0.0	chr5	72315010	72315078	(109223181)	+	L2a	LINE/L2	3357	3426	(0)	3148792
3791	19.1	1.2	3.4	chr5	72315099	72315320	(109222939)	+	L1MB8	LINE/L1	5146	5366	(780)	3148793
410	27.8	5.7	3.4	chr5	72673353	72673471	(108864788)	+	L2c	LINE/L2	3254	3375	(12)	3149344
4183	27.2	13.6	2.4	chr5	72822990	72824482	(108713777)	+	L2a	LINE/L2	339	2025	(1394)	3149565
352	21.0	16.9	9.2	chr5	72954833	72954984	(108583275)	C	L1MC5	LINE/L1	(103)	9201	9036	3149767
1600	21.9	24.0	0.8	chr5	73170248	73170855	(108367404)	C	LTR50	LTR/ERVL	(2)	793	1	3150112
188	35.5	0.0	0.0	chr5	73170875	73170950	(108367309)	+	MIR	SINE/MIR	170	245	(17)	3150113
16731	11.8	2.1	1.2	chr5	73659661	73662056	(107876203)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1	3150875
2179	14.0	0.0	0.0	chr5	73751128	73751435	(107786824)	+	AluSx1	SINE/Alu	1	308	(4)	3151023
91	18.6	2.6	3.4	chr5	73828576	73828805	(107709454)	+	(TTTC)n	Simple_repeat	1	236	(0)	3151128
273	10.5	0.0	0.0	chr5	75526210	75526247	(106012012)	+	7SLRNA	srpRNA	283	320	(0)	3153666
1429	25.3	11.3	1.6	chr5	75588314	75588589	(105949670)	+	L1ME4b	LINE/L1	1	301	(591)	3153772
3020	12.5	2.0	2.2	chr5	75660080	75660537	(105877722)	C	L1MB2	LINE/L1	(0)	6171	5715	3153893
983	25.4	6.3	9.9	chr5	76346961	76347405	(105190854)	C	LTR16	LTR/ERVL	(2)	436	9	3154857
192	31.6	13.4	3.5	chr5	76476256	76476655	(105061604)	C	L2	LINE/L2	(2693)	726	281	3155096
223	32.8	3.3	6.5	chr5	77880087	77880272	(103657987)	C	MIRb	SINE/MIR	(83)	185	6	3157317
279	30.6	15.0	0.0	chr5	78294134	78294241	(103244018)	+	MER5B	DNA/hAT-Charlie	51	177	(1)	3157888
1058	15.8	5.2	2.9	chr5	79565188	79565272	(101972987)	C	LTR29	LTR/ERV1	(15)	607	510	3159983
10405	16.9	7.5	2.5	chr5	80416555	80418148	(101120111)	C	L1MC3	LINE/L1	(789)	6996	5294	3161547
36	18.6	1.7	6.8	chr5	80418149	80418264	(101119995)	+	(TTCCT)n	Simple_repeat	1	118	(0)	3161550
33	5.2	0.0	0.0	chr5	80418280	80418319	(101119940)	+	(TCCCC)n	Simple_repeat	1	40	(0)	3161551
73	24.5	1.8	3.5	chr5	80579091	80579313	(100958946)	+	A-rich	Low_complexity	1	227	(0)	3161832
1619	27.1	4.7	1.2	chr5	80579314	80579907	(100958352)	+	HAL1	LINE/L1	1140	1755	(752)	3161825
423	27.9	6.2	7.3	chr5	82914234	82914574	(98623685)	C	HAL1ME	LINE/L1	(148)	2317	1981	3165282
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
2276	13.4	2.9	0.8	chr5	84160724	84160734	(97377525)	C	L1PB1	LINE/L1	(0)	6151	6141	3166864
111	3.3	0.8	2.3	chr5	84160735	84160866	(97377393)	+	(CTTTC)n	Simple_repeat	1	133	(0)	3166865
2276	13.4	2.9	0.8	chr5	84160867	84161253	(97377006)	C	L1PB1	LINE/L1	(11)	6140	5745	3166864
1523	16.8	3.7	6.8	chr5	84539070	84539379	(96998880)	+	AluJr	SINE/Alu	11	310	(2)	3167390
103	7.3	2.3	2.8	chr5	84539380	84539535	(96998724)	+	(GAAAA)n	Simple_repeat	1	154	(0)	3167391
4855	5.2	0.0	0.0	chr5	84539536	84540126	(96998133)	+	LTR10C	LTR/ERV1	1	591	(0)	3167392
23	17.0	0.0	0.0	chr5	85669723	85669762	(95868497)	+	(CT)n	Simple_repeat	1	40	(0)	3168784
17	14.7	0.0	3.1	chr5	85669917	85669948	(95868311)	+	GA-rich	Low_complexity	1	32	(0)	3168785
13	22.5	3.6	3.5	chr5	87780970	87781024	(93757235)	+	A-rich	Low_complexity	1	57	(0)	3171514
229	33.6	5.2	0.0	chr5	88266986	88267095	(93271164)	C	CR1_Mam	LINE/CR1	(72)	2132	2017	3172084
346	23.5	8.3	5.7	chr5	88267127	88267266	(93270993)	+	MIR3	SINE/MIR	43	186	(22)	3172085
18	6.3	6.1	0.0	chr5	90546707	90546739	(90991520)	+	(AAGAA)n	Simple_repeat	1	35	(0)	3174945
825	24.4	2.3	1.9	chr5	90605635	90605897	(90932362)	C	LTR37B	LTR/ERV1	(7)	461	198	3175017
43	23.6	7.7	2.0	chr5	92748267	92748448	(88789811)	+	(TTCTC)n	Simple_repeat	1	196	(0)	3177836
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
17	15.2	4.3	2.1	chr5	93582091	93582136	(87956123)	+	(CCTCTC)n	Simple_repeat	1	48	(0)	3178829
31	3.3	0.0	0.0	chr5	93582772	93582802	(87955457)	+	(GT)n	Simple_repeat	1	31	(0)	3178831
75	3.5	8.6	0.0	chr5	93583272	93583388	(87954871)	+	(TC)n	Simple_repeat	1	127	(0)	3178832
21	26.9	3.3	3.2	chr5	93583396	93583486	(87954773)	+	(TCT)n	Simple_repeat	1	94	(0)	3178833
17	0.0	0.0	0.0	chr5	93583536	93583556	(87954703)	+	(AGG)n	Simple_repeat	1	21	(0)	3178834
1086	16.0	0.0	0.0	chr5	93873146	93873301	(87664958)	+	AluJo	SINE/Alu	137	292	(20)	3179173
97	5.6	2.4	4.7	chr5	93873310	93873479	(87664780)	+	(GGAAA)n	Simple_repeat	1	166	(0)	3179174
301	30.6	4.4	4.3	chr5	94076403	94076596	(87461663)	C	L2a	LINE/L2	(4)	3422	3208	3179414
1812	15.9	0.4	0.0	chr5	94667779	94668042	(86870217)	C	AluJb	SINE/Alu	(42)	270	6	3180134
27	19.6	6.1	2.9	chr5	94668043	94668048	(86870211)	+	(TCCCTTC)n	Simple_repeat	1	103	(0)	3180135
30	23.2	2.2	2.1	chr5	94668049	94668139	(86870120)	+	(CTTCT)n	Simple_repeat	1	93	(0)	3180136
1566	16.3	2.3	11.3	chr5	94668142	94668333	(86869926)	C	AluJo	SINE/Alu	(6)	306	127	3180137
1902	24.6	4.2	5.1	chr5	95712239	95712860	(85825399)	+	MLT1G	LTR/ERVL-MaLR	3	591	(0)	3181555
32	8.5	1.3	7.9	chr5	95873037	95873123	(85665136)	+	(TTTCC)n	Simple_repeat	1	81	(0)	3181796
2118	12.4	1.4	0.0	chr5	95873124	95873414	(85664845)	C	AluSz6	SINE/Alu	(16)	296	2	3181797
370	35.3	16.8	2.8	chr5	95915474	95916685	(85621574)	C	L2b	LINE/L2	(1)	3374	1919	3181857
16	16.5	0.0	0.0	chr5	95916686	95916712	(85621547)	+	(T)n	Simple_repeat	1	27	(0)	3181858
14	20.1	6.5	0.0	chr5	96751105	96751150	(84787109)	+	(TTTC)n	Simple_repeat	1	49	(0)	3183060
537	10.4	0.0	12.4	chr5	98770684	98770804	(82767455)	+	MER50	LTR/ERV1	499	604	(130)	3185539
503	34.1	12.7	2.9	chr5	99033031	99033477	(82504782)	+	L2	LINE/L2	1233	1729	(1690)	3185952
188	32.1	3.6	1.9	chr5	101678821	101678874	(79859385)	+	MamRTE1	LINE/RTE-BovB	1499	1553	(2259)	3189190
39	13.9	1.0	7.6	chr5	102014493	102014596	(79523663)	+	G-rich	Low_complexity	1	105	(0)	3189612
665	29.1	2.2	0.6	chr5	102796747	102796922	(78741337)	+	MIR	SINE/MIR	69	247	(15)	3190586
207	29.1	2.5	13.2	chr5	102988480	102988570	(78549689)	+	L2a	LINE/L2	3298	3417	(9)	3190831
79	8.5	6.8	2.3	chr5	102988590	102988750	(78549509)	+	GA-rich	Low_complexity	1	172	(0)	3190832
1003	8.9	0.0	0.8	chr5	107399170	107399293	(74138966)	+	AluSx	SINE/Alu	1	123	(189)	3196303
60	4.7	0.7	11.8	chr5	107399294	107399436	(74138823)	+	GA-rich	Low_complexity	1	144	(0)	3196304
376	33.3	2.2	3.3	chr5	109455991	109456170	(72082089)	+	L1ME4b	LINE/L1	703	880	(12)	3199014
69	26.6	2.7	4.1	chr5	111152094	111152362	(70385897)	+	(TTCC)n	Simple_repeat	1	265	(0)	3201048
28	15.6	4.2	4.7	chr5	111757232	111757305	(69780954)	+	G-rich	Low_complexity	1	73	(0)	3201825
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
400	15.9	10.0	0.0	chr5	112869308	112869370	(68668889)	C	7SLRNA	srpRNA	(234)	86	17	3203417
271	29.0	4.1	2.1	chr5	112869370	112869464	(68668795)	C	MLT1J	LTR/ERVL-MaLR	(306)	206	110	3203418
1564	13.9	12.5	1.7	chr5	112869472	112869578	(68668681)	C	MER44A	DNA/TcMar-Tigger	(0)	339	230	3203419
2388	13.8	3.1	0.5	chr5	112869579	112869949	(68668310)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3203420
538	22.8	1.9	9.7	chr5	112959034	112959208	(68579051)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	435	3203609
679	26.2	2.4	3.7	chr5	112959259	112959472	(68578787)	C	MLT1K	LTR/ERVL-MaLR	(154)	441	231	3203609
39	15.3	2.5	0.6	chr5	115522931	115523018	(66015241)	+	GA-rich	Low_complexity	1	89	(0)	3206918
7359	20.2	7.7	6.6	chr5	118092480	118093038	(63445221)	+	L1MCa	LINE/L1	3124	3724	(2597)	3210443
1863	16.8	0.3	0.0	chr5	119073077	119073361	(62464898)	C	AluJb	SINE/Alu	(26)	286	1	3211789
20	31.4	3.4	5.2	chr5	119185077	119185224	(62353035)	+	(TTC)n	Simple_repeat	1	153	(0)	3211952
327	25.7	0.0	2.6	chr5	119185246	119185321	(62352938)	C	Charlie7a	DNA/hAT-Charlie	(170)	102	29	3211953
4224	18.8	10.2	1.1	chr5	119190268	119191229	(62347030)	+	Tigger6a	DNA/TcMar-Tigger	24	1082	(1)	3211960
324	22.8	5.8	5.0	chr5	122407614	122407733	(59130526)	+	L1MC4	LINE/L1	7922	8042	(0)	3215858
16	30.3	0.0	1.6	chr5	123129911	123129972	(58408287)	+	(CTGC)n	Simple_repeat	1	62	(0)	3216958
193	13.7	1.5	4.0	chr5	123129947	123130340	(58407919)	+	(CCTTC)n	Simple_repeat	1	400	(0)	3216959
12	18.1	6.5	2.0	chr5	124672487	124672532	(56865727)	+	A-rich	Low_complexity	1	49	(0)	3218950
30	0.0	0.0	0.0	chr5	124724610	124724635	(56813624)	+	(GT)n	Simple_repeat	1	26	(0)	3219027
229	8.8	0.0	2.9	chr5	124947753	124947787	(56590472)	C	UCON76	Unknown	(5)	236	203	3219415
778	18.8	0.8	0.0	chr5	126539016	126539143	(54999116)	C	FLAM_C	SINE/Alu	(14)	129	1	3221363
13	19.1	8.1	5.4	chr5	127367180	127367265	(54170994)	+	GA-rich	Low_complexity	1	93	(0)	3222743
1633	15.7	8.6	0.0	chr5	127920779	127921033	(53617226)	+	AluJb	SINE/Alu	1	279	(33)	3223477
98	12.3	6.0	4.6	chr5	127921034	127921286	(53616973)	+	A-rich	Low_complexity	13	268	(0)	3223478
29	16.2	7.5	7.5	chr5	128334126	128334286	(53203973)	+	GA-rich	Low_complexity	1	173	(0)	3224016
589	31.1	8.8	5.8	chr5	131270594	131271058	(50267201)	C	LTR78	LTR/ERV1	(64)	1240	761	3227668
331	33.2	9.5	2.6	chr5	132029593	132029787	(49508472)	+	L1M5	LINE/L1	5121	5330	(816)	3228841
32	13.4	5.3	5.0	chr5	132029790	132029883	(49508376)	+	A-rich	Low_complexity	1	99	(0)	3228842
599	30.7	13.1	4.2	chr5	132029919	132030346	(49507913)	C	L2c	LINE/L2	(5)	3382	2911	3228843
1976	18.0	6.1	2.1	chr5	132744109	132745070	(48793189)	C	L1MCa	LINE/L1	(4119)	2983	2180	3229862
14851	11.3	2.7	8.8	chr5	134891932	134893172	(46645087)	C	Tigger1	DNA/TcMar-Tigger	(1296)	1122	1	3233593
406	19.2	14.9	0.0	chr5	134893329	134893448	(46644811)	C	L1ME4b	LINE/L1	(27)	865	725	3233597
29	12.2	0.0	8.1	chr5	137665839	137665912	(43872347)	+	A-rich	Low_complexity	1	74	(0)	3237306
13	6.4	8.6	2.6	chr5	138468080	138468114	(43070145)	+	G-rich	Low_complexity	1	38	(0)	3238920
1826	30.7	15.2	4.6	chr5	138961064	138962213	(42576046)	C	L3	LINE/CR1	(1207)	2892	1614	3239877
445	32.1	11.4	3.5	chr5	139178388	139178892	(42359367)	+	L2c	LINE/L2	2843	3387	(0)	3240227
245	31.9	10.0	1.4	chr5	139571475	139571620	(41966639)	C	MIRb	SINE/MIR	(73)	195	36	3241069
40	26.3	0.0	0.0	chr5	139571720	139571818	(41966441)	+	(TCCC)n	Simple_repeat	1	99	(0)	3241070
31	26.2	5.4	2.6	chr5	139630948	139630998	(41907261)	+	(TCCCT)n	Simple_repeat	1	86	(69)	3241221
20	19.1	1.8	3.5	chr5	139630999	139631055	(41907204)	+	(TCCC)n	Simple_repeat	1	58	(0)	3241222
31	26.2	5.4	2.6	chr5	139631056	139631094	(41907165)	+	(TCCCT)n	Simple_repeat	87	155	(0)	3241221
26	16.1	1.6	3.2	chr5	139631058	139631106	(41907153)	+	(CTTT)n	Simple_repeat	1	49	(0)	3241223
922	20.1	0.0	1.8	chr5	139631107	139631302	(41906957)	C	AluJr	SINE/Alu	(0)	312	137	3241224
416	26.1	11.0	3.7	chr5	140118518	140118760	(41419499)	+	UCON4	Unknown	39	301	(2)	3242052
511	7.6	1.2	3.7	chr5	140174341	140174422	(41363837)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	3242130
630	26.7	14.7	2.5	chr5	140205938	140206408	(41331851)	+	L2a	LINE/L2	2831	3359	(67)	3242180
1505	27.2	23.8	1.8	chr5	140554071	140554894	(40983365)	+	L2a	LINE/L2	1063	2045	(1374)	3242816
2277	9.2	4.4	0.0	chr5	140554895	140555175	(40983084)	C	AluSg	SINE/Alu	(16)	294	1	3242817
695	12.5	1.8	0.0	chr5	140711450	140711561	(40826698)	+	L1MC3	LINE/L1	6747	6860	(925)	3243113
86	10.5	0.0	0.0	chr5	142950946	142951072	(38587187)	+	(CCTTTC)n	Simple_repeat	1	127	(0)	3246946
2350	11.8	0.0	0.0	chr5	142951073	142951359	(38586900)	C	AluSz	SINE/Alu	(25)	287	1	3246947
285	31.4	4.5	0.9	chr5	143118111	143118216	(38420043)	C	L2c	LINE/L2	(255)	3132	3023	3247195
406	26.4	0.0	9.1	chr5	143118264	143118417	(38419842)	C	MIRb	SINE/MIR	(62)	206	67	3247196
11	24.7	2.2	2.2	chr5	143435428	143435472	(38102787)	+	GA-rich	Low_complexity	1	46	(0)	3247650
65	27.0	4.3	2.8	chr5	143440512	143440790	(38097469)	+	(TTTC)n	Simple_repeat	1	291	(0)	3247659
5819	13.3	1.6	1.1	chr5	145999110	145999996	(35538263)	C	Tigger1	DNA/TcMar-Tigger	(1527)	891	1	3251683
2070	13.5	0.7	0.0	chr5	147549148	147549436	(33988823)	C	AluSx	SINE/Alu	(11)	301	11	3254453
51	12.2	0.0	7.0	chr5	147549440	147549554	(33988705)	+	(TTCCC)n	Simple_repeat	1	115	(0)	3254454
2223	20.1	7.6	2.3	chr5	147549642	147550375	(33987884)	C	L1MA7	LINE/L1	(330)	5961	5165	3254455
1845	22.5	3.3	6.1	chr5	148764465	148765141	(32773118)	C	L1MEf	LINE/L1	(4117)	2125	1468	3256381
89	17.3	2.6	1.5	chr5	148765143	148765332	(32772927)	+	(TTTC)n	Simple_repeat	1	195	(0)	3256382
241	34.6	1.4	6.0	chr5	148931433	148931578	(32606681)	+	MIR	SINE/MIR	121	260	(2)	3256704
85	38.6	1.7	2.3	chr5	148931588	148932064	(32606195)	+	(CCTC)n	Simple_repeat	1	485	(0)	3256706
231	15.9	2.2	0.0	chr5	149487332	149487375	(32050884)	+	MIR3	SINE/MIR	50	94	(114)	3257864
430	29.4	7.8	5.0	chr5	149870761	149871009	(31667250)	+	L1MC4	LINE/L1	836	1228	(4987)	3258716
12	13.7	10.0	0.0	chr5	150623314	150623353	(30914906)	+	(TCTCTT)n	Simple_repeat	1	44	(0)	3260381
212	18.5	5.8	3.0	chr5	150779441	150779507	(30758752)	+	MIRc	SINE/MIR	18	86	(182)	3260681
408	29.4	5.3	2.7	chr5	150779613	150779818	(30758441)	+	L2a	LINE/L2	3171	3426	(0)	3260682
21472	9.1	4.7	6.2	chr5	151250210	151251001	(30287258)	C	HERV4_I-int	LTR/ERV1	(5893)	646	1	3261488
3653	12.7	5.4	4.0	chr5	151251002	151251626	(30286633)	C	MER51A	LTR/ERV1	(0)	634	1	3261488
354	32.8	1.6	7.6	chr5	151448140	151448337	(30089922)	C	MIR3	SINE/MIR	(20)	188	3	3261886
244	12.8	0.0	4.1	chr5	153358432	153358480	(28179779)	C	L3	LINE/CR1	(318)	3781	3735	3265091
631	26.7	8.8	0.0	chr5	154520610	154520796	(27017463)	C	L1MC4	LINE/L1	(384)	7658	7454	3267340
13	13.7	2.9	2.9	chr5	154559557	154559590	(26978669)	+	(TTTC)n	Simple_repeat	1	35	(0)	3267444
315	25.9	7.7	5.9	chr5	154589630	154589781	(26948478)	C	L3	LINE/CR1	(190)	3909	3755	3267535
314	34.8	4.3	0.6	chr5	154654293	154654448	(26883811)	C	L1ME4a	LINE/L1	(4)	6120	5959	3267692
265	8.6	0.0	0.0	chr5	154761058	154761092	(26777167)	C	U2	snRNA	(153)	35	1	3267989
140	33.4	3.8	2.7	chr5	158851355	158852093	(22686166)	+	A-rich	Low_complexity	1	767	(0)	3275207
133	24.4	4.0	4.9	chr5	159098439	159098991	(22439268)	+	GA-rich	Low_complexity	1	575	(0)	3275544
32	18.1	3.1	0.0	chr5	159100169	159100233	(22438026)	+	GA-rich	Low_complexity	1	67	(0)	3275550
24	20.2	7.8	2.7	chr5	159611309	159611419	(21926840)	+	(TCTTCC)n	Simple_repeat	1	116	(0)	3276438
555	15.2	0.0	0.0	chr5	159611439	159611517	(21926742)	C	AluJo	SINE/Alu	(1)	311	233	3276439
125	19.7	3.0	1.9	chr5	163022599	163022903	(18515356)	+	A-rich	Low_complexity	1	314	(0)	3281934
395	20.9	9.9	6.9	chr5	163436401	163436575	(18101684)	+	MamGypLTR1c	LTR/Gypsy	1	181	(622)	3282553
436	29.3	3.7	4.3	chr5	163436710	163436873	(18101386)	+	MamGypLTR1d	LTR/Gypsy	651	813	(0)	3282554
626	17.8	19.6	1.3	chr5	163509416	163509569	(18028690)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3282654
31	0.0	0.0	0.0	chr5	168070794	168070820	(13467439)	+	(AG)n	Simple_repeat	1	27	(0)	3289319
1551	20.4	1.9	2.9	chr5	168070821	168070839	(13467420)	+	AluJb	SINE/Alu	293	311	(1)	3289318
33	24.5	4.8	4.8	chr5	168070842	168071003	(13467256)	+	A-rich	Low_complexity	1	161	(0)	3289320
21	10.5	2.2	4.3	chr5	168070849	168070894	(13467365)	+	GA-rich	Low_complexity	1	47	(0)	3289321
607	27.7	3.4	2.0	chr5	168071043	168071268	(13466991)	+	MIR	SINE/MIR	7	236	(26)	3289322
51	9.6	0.0	2.4	chr5	171636027	171636110	(9902149)	+	(TCTTT)n	Simple_repeat	1	84	(0)	3295731
2301	12.9	0.3	0.0	chr5	171636111	171636419	(9901840)	C	AluSz	SINE/Alu	(1)	311	2	3295732
29	0.0	0.0	0.0	chr5	172004868	172004892	(9533367)	+	(CA)n	Simple_repeat	1	25	(0)	3296453
91	23.7	0.8	3.2	chr5	172189784	172190028	(9348231)	+	A-rich	Low_complexity	1	247	(0)	3296892
29	7.9	0.0	0.0	chr5	173218153	173218193	(8320066)	+	(TCCTT)n	Simple_repeat	1	41	(0)	3299199
80	14.7	1.2	4.1	chr5	173218194	173218354	(8319905)	+	(TTCC)n	Simple_repeat	1	157	(0)	3299200
13	26.6	1.8	3.6	chr5	173239434	173239491	(8298768)	+	(CCCTC)n	Simple_repeat	1	56	(0)	3299245
2628	15.4	2.4	1.1	chr5	173239495	173239954	(8298305)	C	L1MB7	LINE/L1	(8)	6176	5711	3299246
47	0.0	0.0	0.0	chr5	173892998	173893037	(7645222)	+	(TG)n	Simple_repeat	1	40	(0)	3300523
16	0.0	0.0	0.0	chr5	173893038	173893055	(7645204)	+	(AG)n	Simple_repeat	1	18	(0)	3300524
434	28.6	6.5	12.8	chr5	173902039	173902319	(7635940)	+	Tigger19b	DNA/TcMar-Tigger	2	263	(287)	3300539
1740	17.3	0.7	1.4	chr5	175328548	175328836	(6209423)	+	AluJr	SINE/Alu	2	288	(24)	3303232
80	0.0	2.4	1.2	chr5	175328850	175328931	(6209328)	+	(GGAAA)n	Simple_repeat	1	84	(0)	3303233
7742	17.8	2.3	0.1	chr5	175649230	175650628	(5887631)	C	MSTB-int	LTR/ERVL-MaLR	(1)	1650	221	3303842
106	11.2	2.8	4.5	chr5	175650630	175650847	(5887412)	+	(CTTT)n	Simple_repeat	1	224	(0)	3303843
2781	19.6	4.8	2.3	chr5	177232366	177232928	(4305331)	+	Tigger4	DNA/TcMar-Tigger	1	578	(2153)	3307005
960	13.1	0.0	5.6	chr5	177232911	177233072	(4305187)	+	Tigger4	DNA/TcMar-Tigger	1017	1169	(1562)	3307006
1670	19.3	4.9	2.4	chr5	177233073	177233368	(4304891)	C	AluJb	SINE/Alu	(8)	304	1	3307007
281	30.4	2.8	8.9	chr5	177369526	177369779	(4168480)	C	L2b	LINE/L2	(209)	3217	2966	3307274
120	11.6	3.5	3.7	chr5	177379713	177379859	(4158400)	+	(TCTT)n	Simple_repeat	1	149	(0)	3307295
2353	10.2	0.3	1.3	chr5	177379860	177380199	(4158060)	C	AluSp	SINE/Alu	(0)	313	3	3307296
548	31.3	10.2	5.4	chr5	177445441	177445757	(4092502)	+	MLT1K	LTR/ERVL-MaLR	207	540	(55)	3307430
303	29.3	7.4	0.0	chr5	177445760	177445834	(4092425)	C	L1MEd	LINE/L1	(5027)	2059	1979	3307431
875	14.8	0.0	0.0	chr5	177445843	177445964	(4092295)	C	AluSz6	SINE/Alu	(0)	312	191	3307432
627	27.5	18.8	2.6	chr5	177502044	177502574	(4035685)	C	L2	LINE/L2	(1219)	2200	1564	3307539
209	25.7	2.8	4.1	chr5	178200186	178200258	(3338001)	C	L2	LINE/L2	(541)	2878	2807	3308780
363	23.8	16.7	2.1	chr5	179558898	179559086	(1979173)	+	L1M5	LINE/L1	5254	5475	(767)	3311085
1123	16.5	10.5	0.0	chr5	179696798	179697045	(1841214)	+	Tigger1	DNA/TcMar-Tigger	8	284	(2134)	3311399
408	29.9	6.5	4.8	chr5	179755077	179755241	(1783018)	+	MIRb	SINE/MIR	36	203	(65)	3311532
1196	17.5	1.9	2.1	chr5	179811359	179811651	(1726608)	+	MER61B	LTR/ERV1	47	427	(0)	3311626
777	16.0	11.8	3.1	chr5	179811653	179811836	(1726423)	+	MER61-int	LTR/ERV1	3	205	(5012)	3311626
796	13.4	19.9	14.8	chr5	181216926	181217208	(321051)	C	AluJr	SINE/Alu	(11)	301	1	3313879
14	26.5	0.0	0.0	chr5	181233363	181233404	(304855)	+	(TCTCTT)n	Simple_repeat	1	42	(0)	3313904
269	36.4	8.3	2.3	chr6	3383732	3383945	(167422034)	C	L2	LINE/L2	(404)	3015	2788	3318811
4237	13.2	1.8	3.0	chr6	6687670	6688393	(164117586)	C	L1PA17	LINE/L1	(17)	6149	5435	3323759
12	15.3	8.1	0.0	chr6	6688503	6688539	(164117440)	+	(TTTCCC)n	Simple_repeat	1	40	(0)	3323760
19	0.0	4.2	0.0	chr6	6688545	6688568	(164117411)	+	(AC)n	Simple_repeat	1	25	(0)	3323761
16384	10.4	2.0	2.1	chr6	7497308	7499727	(163306252)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1	3325276
18	27.0	0.0	0.0	chr6	10412177	10412229	(160393750)	+	(GAGC)n	Simple_repeat	1	53	(0)	3329448
14	26.4	5.1	0.0	chr6	10412300	10412358	(160393621)	+	A-rich	Low_complexity	1	62	(0)	3329449
54	31.0	3.2	1.8	chr6	10412302	10412397	(160393582)	+	GA-rich	Low_complexity	1	269	(0)	3329450
31	26.7	2.9	5.7	chr6	10412398	10412567	(160393412)	+	G-rich	Low_complexity	1	175	(0)	3329451
23	10.0	0.0	0.0	chr6	13174717	13174749	(157631230)	+	(TC)n	Simple_repeat	1	33	(0)	3333815
264	31.8	11.7	0.6	chr6	13174762	13174935	(157631044)	+	MIR	SINE/MIR	61	256	(6)	3333816
2927	20.6	13.9	2.2	chr6	13672223	13673806	(157132173)	+	L1MCa	LINE/L1	517	2474	(4171)	3334666
33	0.0	0.0	0.0	chr6	13708820	13708847	(157097132)	+	(CA)n	Simple_repeat	1	28	(0)	3334735
47	23.1	1.3	4.5	chr6	14027242	14027393	(156778586)	+	(TTTTC)n	Simple_repeat	1	154	(0)	3335321
712	26.7	7.1	1.2	chr6	15654769	15655129	(155150850)	+	L1MC5a	LINE/L1	2365	2617	(160)	3338203
342	30.7	5.8	5.3	chr6	16727972	16728160	(154077819)	C	MIR3	SINE/MIR	(14)	194	5	3339973
208	18.6	10.6	4.8	chr6	16763170	16763231	(154042748)	+	LFSINE_Vert	SINE/tRNA	123	188	(271)	3340019
1420	29.5	8.8	6.5	chr6	17042598	17043363	(153762616)	C	L1ME1	LINE/L1	(5754)	793	9	3340458
16	19.6	0.0	0.0	chr6	17303507	17303536	(153502443)	+	G-rich	Low_complexity	1	30	(0)	3340890
49	20.1	4.4	3.6	chr6	17303537	17303668	(153502311)	+	GA-rich	Low_complexity	5	167	(0)	3340891
3066	12.2	1.6	4.8	chr6	17303671	17304017	(153501962)	+	L1MA4	LINE/L1	5796	6150	(150)	3340892
4731	22.2	3.7	2.7	chr6	18047986	18049480	(152756499)	+	L1MCb	LINE/L1	1	1602	(5149)	3342322
3007	20.3	1.9	1.3	chr6	19112261	19113050	(151692929)	C	L1MA7	LINE/L1	(3334)	4228	3416	3344010
49	13.7	5.2	4.2	chr6	19113051	19113168	(151692811)	+	(CTTC)n	Simple_repeat	1	119	(0)	3344016
87	2.0	0.0	6.0	chr6	19113169	19113285	(151692694)	+	(TTTC)n	Simple_repeat	1	117	(0)	3344017
49	13.7	5.2	4.2	chr6	19113286	19113301	(151692678)	+	(CTTC)n	Simple_repeat	4	19	(0)	3344018
15	5.6	0.0	0.0	chr6	20610490	20610508	(150195471)	+	(T)n	Simple_repeat	1	19	(0)	3346357
283	26.5	2.4	1.2	chr6	20610751	20610834	(150195145)	C	L1M6	LINE/L1	(4657)	1839	1755	3346358
14	8.7	0.0	3.7	chr6	26301125	26301151	(144504828)	+	(CTTT)n	Simple_repeat	1	27	(0)	3354967
239	23.8	3.4	6.7	chr6	26342201	26342290	(144463689)	C	MIRc	SINE/MIR	(17)	251	165	3355063
168	13.9	2.1	2.4	chr6	26382583	26382911	(144423068)	+	A-rich	Low_complexity	1	336	(0)	3355153
379	25.5	11.7	3.6	chr6	26537048	26537250	(144268729)	+	L2a	LINE/L2	3181	3386	(1)	3355426
280	30.6	0.0	0.0	chr6	26543092	26543163	(144262816)	C	BLACKJACK	DNA/hAT-Blackjack	(0)	2969	2898	3355435
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
2423	11.1	1.3	0.0	chr6	27156689	27156995	(143648984)	+	AluSz	SINE/Alu	1	311	(1)	3356391
48	31.3	0.7	1.3	chr6	27156996	27157148	(143648831)	+	A-rich	Low_complexity	1	154	(0)	3356392
657	2.7	0.0	0.0	chr6	27235509	27235581	(143570398)	+	tRNA-Val-GTY	tRNA	1	73	(3)	3356551
2297	7.3	0.0	0.3	chr6	27235607	27235925	(143570054)	C	AluSc5	SINE/Alu	(0)	309	1	3356552
11	26.7	4.5	2.9	chr6	27296365	27296430	(143509549)	+	GA-rich	Low_complexity	1	69	(0)	3356669
924	22.4	7.5	4.3	chr6	27297146	27297518	(143508461)	+	Charlie2b	DNA/hAT-Charlie	2079	2464	(318)	3356671
44	0.0	0.0	0.0	chr6	27374386	27374423	(143431556)	+	(GT)n	Simple_repeat	1	38	(0)	3356791
1312	19.8	7.4	4.9	chr6	27477073	27477745	(143328234)	C	LTR48	LTR/ERV1	(0)	555	1	3356950
829	17.8	0.0	0.0	chr6	27500015	27500143	(143305836)	+	AluJb	SINE/Alu	1	129	(183)	3356999
88	30.1	2.2	2.4	chr6	27500145	27500466	(143305513)	+	A-rich	Low_complexity	1	329	(0)	3357000
19	19.8	4.7	5.6	chr6	27578082	27578166	(143227813)	+	(CTTCTC)n	Simple_repeat	1	89	(0)	3357151
340	26.1	14.7	6.5	chr6	27621425	27621703	(143184276)	C	HAL1b	LINE/L1	(1189)	1232	927	3357240
2239	17.6	7.6	6.1	chr6	27621710	27622267	(143183712)	C	MER34A	LTR/ERV1	(4)	567	1	3357241
903	26.0	9.9	1.5	chr6	27651169	27651508	(143154471)	+	L1ME3A	LINE/L1	5643	6014	(159)	3357300
31	0.0	0.0	0.0	chr6	27651559	27651585	(143154394)	+	(GT)n	Simple_repeat	1	27	(0)	3357301
252	23.7	0.0	6.3	chr6	27651713	27651775	(143154204)	C	MLT2D	LTR/ERVL	(65)	495	437	3357302
680	0.0	0.0	0.0	chr6	27670564	27670637	(143135342)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	3357338
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
1009	24.6	16.1	4.0	chr6	27672796	27673090	(143132889)	+	L2	LINE/L2	1073	1426	(1993)	3357342
721	25.7	8.8	4.4	chr6	27752233	27752560	(143053419)	C	LTR41	LTR/ERVL	(349)	419	5	3357533
2352	5.8	3.6	0.0	chr6	27752678	27752969	(143053010)	+	AluSq	SINE/Alu	1	303	(10)	3357534
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
18	15.5	0.0	0.0	chr6	27777007	27777036	(143028943)	+	A-rich	Low_complexity	1	30	(0)	3357574
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
15	5.6	0.0	0.0	chr6	27902474	27902492	(142903487)	+	(A)n	Simple_repeat	1	19	(0)	3357801
650	0.0	0.0	0.0	chr6	27902493	27902564	(142903415)	C	tRNA-Met-i	tRNA	(3)	72	1	3357802
14	27.6	0.0	2.0	chr6	28275069	28275118	(142530861)	+	(TTCACT)n	Simple_repeat	1	50	(0)	3358377
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
329	20.0	0.0	1.3	chr6	28349413	28349488	(142456491)	C	L1M5	LINE/L1	(1847)	4299	4225	3358486
397	31.8	4.4	5.2	chr6	28349524	28349795	(142456184)	C	L1ME4b	LINE/L1	(3)	889	620	3358487
343	23.0	3.3	8.1	chr6	28351463	28351623	(142454356)	C	L1MC5	LINE/L1	(3)	9301	9149	3358491
23	31.4	2.5	4.1	chr6	28351629	28351746	(142454233)	+	(CCTC)n	Simple_repeat	1	121	(0)	3358492
958	26.2	4.2	9.7	chr6	28351748	28352221	(142453758)	C	L1MC5a	LINE/L1	(119)	2658	2212	3358493
339	29.5	3.7	4.3	chr6	28492771	28493099	(142312880)	C	L1M5	LINE/L1	(3010)	3204	2878	3358721
12	14.8	8.2	3.8	chr6	34462169	34462217	(136343762)	+	A-rich	Low_complexity	1	53	(0)	3368455
23	10.9	5.0	0.0	chr6	34462248	34462287	(136343692)	+	GA-rich	Low_complexity	1	42	(0)	3368456
223	27.3	8.3	0.0	chr6	34697140	34697205	(136108774)	C	MIR3	SINE/MIR	(56)	152	81	3368937
60	13.5	6.5	1.4	chr6	34942814	34942986	(135862993)	+	(CTTTTC)n	Simple_repeat	1	181	(0)	3369507
386	35.1	7.0	6.7	chr6	34977454	34977722	(135828257)	C	L3	LINE/CR1	(44)	4055	3786	3369562
656	26.7	10.2	1.9	chr6	35246305	35246518	(135559461)	C	MIR	SINE/MIR	(0)	262	29	3369965
250	29.9	14.5	4.5	chr6	35732360	35732513	(135073466)	C	MIRc	SINE/MIR	(55)	213	37	3371024
15	13.7	0.0	0.0	chr6	36195773	36195796	(134610183)	+	(T)n	Simple_repeat	1	24	(0)	3371981
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
3055	26.9	9.8	1.4	chr6	36867335	36868514	(133937465)	+	HAL1b	LINE/L1	1	1290	(1131)	3373466
306	37.0	0.7	1.4	chr6	36889208	36889355	(133916624)	C	L2c	LINE/L2	(1347)	2072	1926	3373500
1588	13.7	11.3	1.1	chr6	37205343	37205612	(133600367)	+	AluJb	SINE/Alu	1	301	(11)	3374232
8884	13.6	3.4	4.9	chr6	37423266	37423607	(133382372)	C	L1M4c	LINE/L1	(4036)	3531	3194	3374662
3212	15.9	0.5	7.6	chr6	37423608	37424237	(133381742)	C	LTR9	LTR/ERV1	(0)	612	24	3374668
22	18.4	10.1	1.0	chr6	37647698	37647786	(133158193)	+	GA-rich	Low_complexity	1	98	(0)	3375061
126	6.5	5.1	0.0	chr6	37698157	37698352	(133107627)	+	(TC)n	Simple_repeat	1	206	(0)	3375153
1668	26.6	4.2	3.8	chr6	37871666	37872381	(132933598)	C	L1MEb	LINE/L1	(5326)	810	92	3375537
1553	19.8	18.4	1.8	chr6	38697213	38697726	(132108253)	+	LTR87	LTR/ERVL?	13	618	(6)	3376810
98	20.5	3.7	2.5	chr6	40876457	40876725	(129929254)	+	(CTTC)n	Simple_repeat	1	279	(0)	3380216
511	28.1	0.7	0.0	chr6	41141877	41142011	(129663968)	+	MIR	SINE/MIR	3	138	(124)	3380677
12	18.6	5.4	0.0	chr6	41142017	41142053	(129663926)	+	(TTTTCC)n	Simple_repeat	1	39	(0)	3380678
238	17.4	22.5	1.4	chr6	41142108	41142177	(129663802)	+	MIRb	SINE/MIR	180	268	(0)	3380679
1919	11.9	1.7	3.6	chr6	41370236	41370538	(129435441)	+	AluSx1	SINE/Alu	2	298	(14)	3381021
339	27.6	21.6	3.3	chr6	41370539	41370998	(129434981)	+	L2a	LINE/L2	2847	3426	(0)	3381019
276	27.1	5.4	0.0	chr6	41425329	41425429	(129380550)	C	MIR3	SINE/MIR	(21)	187	79	3381132
1343	23.1	12.2	1.6	chr6	41425412	41426063	(129379916)	C	L2a	LINE/L2	(2)	3424	2655	3381133
25	21.6	7.7	0.0	chr6	41524338	41524415	(129281564)	+	GA-rich	Low_complexity	1	84	(0)	3381336
28	14.5	0.0	0.0	chr6	41524535	41524580	(129281399)	+	(CT)n	Simple_repeat	1	46	(0)	3381337
15	3.6	0.0	11.1	chr6	42010424	42010459	(128795520)	+	(GGGA)n	Simple_repeat	1	36	(0)	3382324
49	17.2	1.4	2.1	chr6	42462607	42462712	(128343267)	+	A-rich	Low_complexity	1	105	(0)	3383303
2252	12.7	0.0	1.0	chr6	42728997	42729310	(128076669)	+	AluSx	SINE/Alu	1	311	(1)	3383877
89	21.2	1.1	4.8	chr6	42729311	42729464	(128076515)	+	A-rich	Low_complexity	107	252	(0)	3383878
2033	14.9	0.3	0.3	chr6	42729468	42729775	(128076204)	+	AluJb	SINE/Alu	1	308	(4)	3383879
2620	6.8	0.0	0.3	chr6	43393993	43394303	(127411676)	+	AluY	SINE/Alu	1	310	(1)	3385263
24	31.2	2.4	3.2	chr6	43394304	43394367	(127411612)	+	GA-rich	Low_complexity	59	121	(0)	3385264
15	18.3	0.0	2.6	chr6	43454091	43454129	(127351850)	+	(CCCTTT)n	Simple_repeat	1	39	(0)	3385383
253	29.2	12.5	1.2	chr6	43559486	43559648	(127246331)	+	L2c	LINE/L2	3072	3255	(132)	3385570
800	17.9	0.0	0.0	chr6	44070950	44071072	(126734907)	C	FLAM_A	SINE/Alu	(16)	126	4	3386513
802	31.9	7.6	3.5	chr6	44071073	44071604	(126734375)	C	L1ME4b	LINE/L1	(980)	5166	4611	3386512
13224	14.8	2.3	4.5	chr6	45207569	45208444	(125597535)	+	Tigger1	DNA/TcMar-Tigger	94	975	(1443)	3388305
2383	27.2	11.6	4.8	chr6	45794662	45795833	(125010146)	C	HAL1ME	LINE/L1	(879)	1586	325	3389181
41	17.1	3.5	0.0	chr6	46734307	46734391	(124071588)	+	GA-rich	Low_complexity	1	88	(0)	3390625
16	0.0	4.2	4.0	chr6	46734392	46734415	(124071564)	+	(GT)n	Simple_repeat	1	25	(0)	3390626
94	0.0	1.1	1.1	chr6	46734416	46734503	(124071476)	+	(GA)n	Simple_repeat	1	89	(0)	3390627
1600	33.4	9.6	4.1	chr6	46744883	46746086	(124059893)	+	L2c	LINE/L2	2073	3370	(5)	3390658
310	31.7	5.3	3.4	chr6	47496882	47497175	(123308804)	C	HAL1ME	LINE/L1	(192)	2273	1974	3391853
87	12.8	5.7	4.5	chr6	47497190	47497419	(123308560)	+	(TTTCC)n	Simple_repeat	1	232	(0)	3391854
13	22.7	2.0	3.9	chr6	49551958	49552007	(121253972)	+	A-rich	Low_complexity	1	51	(0)	3394543
260	35.2	10.9	0.7	chr6	52415339	52415478	(118390501)	C	MIR3	SINE/MIR	(49)	159	4	3398514
13	19.4	2.2	4.3	chr6	53347204	53347248	(117458731)	+	A-rich	Low_complexity	1	46	(0)	3400035
48	16.5	2.4	4.6	chr6	53903480	53903505	(116902474)	+	(TCTCTTT)n	Simple_repeat	1	127	(0)	3400904
32	13.7	1.0	9.1	chr6	53903506	53903603	(116902376)	+	(CTTTTC)n	Simple_repeat	1	99	(0)	3400905
231	21.2	2.9	2.1	chr6	54310381	54310973	(116495006)	+	(CTTT)n	Simple_repeat	1	597	(0)	3401467
1604	28.6	7.0	3.0	chr6	54310987	54311693	(116494286)	C	L1ME5	LINE/L1	(126)	6068	5331	3401468
14	21.3	5.0	6.0	chr6	54875666	54875745	(115930234)	+	(AGGTGGA)n	Simple_repeat	1	84	(0)	3402237
113	12.5	2.9	4.4	chr6	55045576	55045806	(115760173)	+	(CTTT)n	Simple_repeat	1	228	(0)	3402437
180	24.3	0.0	0.0	chr6	56550452	56550488	(114255491)	C	MIRc	SINE/MIR	(19)	249	213	3404299
1077	16.2	1.2	0.0	chr6	57171727	57171886	(113634093)	+	AluJb	SINE/Alu	136	297	(15)	3405240
331	13.3	1.0	2.8	chr6	63412391	63412997	(107392982)	+	A-rich	Low_complexity	1	613	(0)	3410453
1714	27.1	5.9	3.2	chr6	63598416	63598975	(107207004)	C	LTR33C	LTR/ERVL	(29)	600	25	3410846
12	26.9	6.5	0.0	chr6	70365518	70365579	(100440400)	+	A-rich	Low_complexity	1	66	(0)	3419101
1867	26.2	10.5	10.7	chr6	70466953	70468119	(100337860)	C	HAL1	LINE/L1	(680)	1827	664	3419254
12	21.7	0.0	2.9	chr6	70684926	70684960	(100121019)	+	(TTTC)n	Simple_repeat	1	35	(0)	3419618
406	23.7	15.1	0.7	chr6	70684969	70685104	(100120875)	+	MIRb	SINE/MIR	100	258	(10)	3419619
1193	18.9	1.0	0.0	chr6	71645204	71645404	(99160575)	C	MSTD	LTR/ERVL-MaLR	(0)	396	194	3420873
353	26.5	0.0	3.9	chr6	73556224	73556325	(97249654)	+	L1ME4a	LINE/L1	5969	6066	(58)	3423754
885	23.1	6.3	6.0	chr6	74517889	74518397	(96287582)	+	MLT1D	LTR/ERVL-MaLR	1	500	(127)	3425072
26	20.2	0.0	0.0	chr6	75284721	75284777	(95521202)	+	(CGCCGC)n	Simple_repeat	1	57	(0)	3425987
22	21.5	3.2	1.5	chr6	75284852	75284927	(95521052)	+	GA-rich	Low_complexity	1	77	(0)	3425988
21	17.8	0.0	0.0	chr6	75350389	75350426	(95455553)	+	(T)n	Simple_repeat	1	38	(0)	3426079
516	30.6	0.5	2.7	chr6	75528197	75528384	(95277595)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	3426334
1510	16.3	6.3	4.6	chr6	75608185	75608466	(95197513)	+	AluJo	SINE/Alu	12	298	(14)	3426474
46	16.1	2.0	2.0	chr6	75608478	75608575	(95197404)	+	GA-rich	Low_complexity	1	100	(0)	3426475
714	29.9	3.6	4.8	chr6	75608596	75608823	(95197156)	+	MIR	SINE/MIR	18	242	(20)	3426476
630	30.9	7.3	3.0	chr6	75794023	75794614	(95011365)	+	HAL1	LINE/L1	1067	1660	(847)	3426845
308	18.8	3.9	1.2	chr6	79089569	79090289	(91715690)	+	(CCTT)n	Simple_repeat	1	749	(0)	3430789
58	3.8	2.4	1.2	chr6	81948371	81948453	(88857526)	+	(GGAAA)n	Simple_repeat	1	85	(0)	3434453
12	16.5	0.0	0.0	chr6	82246212	82246238	(88559741)	+	(AATTC)n	Simple_repeat	1	27	(0)	3434864
263	31.5	14.7	2.2	chr6	82331360	82331578	(88474401)	+	MamTip2	DNA/hAT-Tip100	1	239	(66)	3435016
31	13.5	3.5	5.7	chr6	83536883	83536967	(87269012)	+	(CTTT)n	Simple_repeat	1	88	(0)	3436675
397	29.7	14.6	3.0	chr6	83536968	83537328	(87268651)	C	HAL1	LINE/L1	(1218)	1289	880	3436676
812	15.0	0.6	6.5	chr6	84293232	84293416	(86512563)	C	L1MB4	LINE/L1	(1)	6179	6006	3437676
3423	24.3	12.9	9.5	chr6	84293417	84293504	(86512475)	C	HAL1M8	LINE/L1	(1849)	1142	1041	3437670
5638	15.5	3.3	0.7	chr6	84293513	84295345	(86510634)	C	L1MA9	LINE/L1	(5)	6307	4420	3437677
17	15.3	0.0	0.0	chr6	84878116	84878149	(85927830)	+	(T)n	Simple_repeat	1	34	(0)	3438371
3953	27.3	7.7	5.3	chr6	85864766	85867347	(84938632)	C	HERV3-int	LTR/ERV1	(5957)	2469	1	3439675
395	34.2	7.5	6.9	chr6	87139265	87139597	(83666382)	C	L2	LINE/L2	(823)	2596	2262	3441123
1700	18.7	5.8	8.2	chr6	87196057	87196324	(83609655)	C	Tigger6a	DNA/TcMar-Tigger	(247)	836	563	3441204
1993	21.2	4.8	1.2	chr6	87196322	87196741	(83609238)	C	Tigger6a	DNA/TcMar-Tigger	(650)	433	1	3441204
655	35.1	7.9	5.2	chr6	87590481	87590888	(83215091)	C	L2b	LINE/L2	(33)	3342	2923	3441830
883	27.6	5.7	2.8	chr6	88881214	88881571	(81924408)	C	Charlie2a	DNA/hAT-Charlie	(1021)	1840	1472	3443719
13	13.7	0.0	0.0	chr6	88881614	88881638	(81924341)	+	(AGAC)n	Simple_repeat	1	25	(0)	3443720
797	18.4	0.7	0.0	chr6	89139583	89139718	(81666261)	+	AluJb	SINE/Alu	157	293	(19)	3444265
2043	9.9	0.4	0.0	chr6	89897803	89898064	(80907915)	+	AluSp	SINE/Alu	1	263	(50)	3445608
133	5.6	5.1	1.3	chr6	89898075	89898288	(80907691)	+	(CTTTC)n	Simple_repeat	1	225	(0)	3445609
805	8.7	0.0	0.0	chr6	89898289	89898392	(80907587)	C	HY1	scRNA	(15)	104	1	3445610
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
23	21.3	4.0	2.5	chr6	90412681	90412694	(80393285)	+	GA-rich	Low_complexity	1	15	(0)	3446358
28	0.0	0.0	0.0	chr6	90412695	90412721	(80393258)	+	(AAGGA)n	Simple_repeat	1	27	(0)	3446359
23	21.3	4.0	2.5	chr6	90412722	90412782	(80393197)	+	GA-rich	Low_complexity	16	77	(0)	3446360
389	31.3	16.3	1.0	chr6	90803060	90803256	(80002723)	+	MIRc	SINE/MIR	17	249	(19)	3446889
12	21.7	0.0	2.9	chr6	93260943	93260977	(77545002)	+	(TTCT)n	Simple_repeat	1	35	(0)	3449869
719	30.6	15.7	2.2	chr6	93304646	93305159	(77500820)	+	L2a	LINE/L2	2799	3393	(33)	3449923
18	21.3	5.7	4.3	chr6	93305256	93305343	(77500636)	+	A-rich	Low_complexity	1	93	(0)	3449927
14	0.0	0.0	0.0	chr6	93417067	93417084	(77388895)	+	(GGC)n	Simple_repeat	1	18	(0)	3450053
311	36.9	1.5	0.8	chr6	94637724	94637854	(76168125)	C	MIRb	SINE/MIR	(66)	202	71	3451579
23	20.8	2.7	4.0	chr6	94637921	94637994	(76167985)	+	GA-rich	Low_complexity	1	76	(0)	3451580
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
582	19.6	10.9	0.9	chr6	99587840	99587946	(71218033)	C	FLAM_A	SINE/Alu	(23)	119	1	3457913
12	23.6	2.0	4.0	chr6	104954453	104954501	(65851478)	+	(CTTT)n	Simple_repeat	1	50	(0)	3464702
13	22.0	5.4	7.1	chr6	104954502	104954541	(65851438)	+	(TCTCT)n	Simple_repeat	5	98	(0)	3464703
20	8.8	0.0	5.0	chr6	105992453	105992492	(64813487)	+	(CAAAA)n	Simple_repeat	1	40	(0)	3466236
824	19.3	0.0	0.0	chr6	106883380	106883514	(63922465)	C	FLAM_C	SINE/Alu	(8)	135	1	3467682
1538	14.0	6.4	1.2	chr6	106883516	106883768	(63922211)	C	MER39B	LTR/ERV1	(386)	267	1	3467680
1661	16.6	8.1	4.9	chr6	106888684	106889200	(63916779)	+	MER39	LTR/ERV1	31	612	(95)	3467687
2470	8.4	0.0	0.7	chr6	106978225	106978533	(63827446)	C	AluSq2	SINE/Alu	(4)	309	3	3467867
17	16.8	3.3	6.3	chr6	107822459	107822519	(62983460)	+	(TTTC)n	Simple_repeat	1	63	(0)	3469435
22	10.8	0.0	0.0	chr6	107822491	107822521	(62983458)	+	(T)n	Simple_repeat	1	31	(0)	3469436
811	14.1	7.6	0.0	chr6	108193851	108193971	(62612008)	+	FLAM_C	SINE/Alu	3	133	(10)	3470116
32	19.1	5.2	2.0	chr6	108193983	108194078	(62611901)	+	A-rich	Low_complexity	1	101	(0)	3470117
733	16.9	7.0	7.5	chr6	108194141	108194257	(62611722)	+	MER5B	DNA/hAT-Charlie	7	123	(55)	3470118
33	32.9	1.7	0.0	chr6	109270243	109270361	(61535618)	+	(CTTT)n	Simple_repeat	1	121	(0)	3471917
13	7.4	0.0	8.8	chr6	110040045	110040078	(60765901)	+	A-rich	Low_complexity	1	34	(0)	3473071
1407	22.3	5.0	8.9	chr6	110040149	110040480	(60765499)	C	MER84	LTR/ERV1	(2)	505	171	3473072
1973	15.0	0.0	0.0	chr6	110694835	110695108	(60110871)	+	AluSx1	SINE/Alu	1	274	(38)	3474115
19099	11.0	1.3	5.1	chr6	110695109	110696639	(60109340)	+	L1PB3	LINE/L1	3537	4994	(1868)	3474114
6135	14.3	4.1	3.1	chr6	110823124	110823600	(59982379)	+	L1PB3	LINE/L1	3891	4378	(1768)	3474379
981	25.4	8.2	6.1	chr6	112015810	112016386	(58789593)	C	L2a	LINE/L2	(239)	3187	2592	3476527
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
29	31.8	1.6	3.0	chr6	112805059	112805187	(58000792)	+	(TTTC)n	Simple_repeat	1	131	(0)	3477590
582	36.3	6.5	3.2	chr6	112934567	112935340	(57870639)	+	L2a	LINE/L2	2623	3425	(1)	3477758
7775	14.1	1.6	2.7	chr6	116508728	116510291	(54295688)	+	L1PB3	LINE/L1	4037	5592	(562)	3482654
1541	19.0	7.9	1.3	chr6	117478605	117478982	(53326997)	+	MER31B	LTR/ERV1	1	405	(61)	3483943
1085	22.1	5.1	2.2	chr6	122101816	122102138	(48703841)	+	L1MD1	LINE/L1	4620	4952	(1194)	3489989
289	8.3	0.0	0.0	chr6	122659639	122659686	(48146293)	C	L1PA13	LINE/L1	(0)	6163	6116	3490688
631	31.9	16.0	2.6	chr6	123763322	123764127	(47041852)	C	L2c	LINE/L2	(631)	2788	1855	3492131
12	18.1	3.1	0.0	chr6	124964015	124964046	(45841933)	+	(AAGCA)n	Simple_repeat	1	33	(0)	3493635
25	25.3	6.1	0.9	chr6	125102370	125102468	(45703511)	+	A-rich	Low_complexity	1	105	(0)	3493850
321	29.1	3.0	1.6	chr6	125744808	125744936	(45061043)	+	L4_B_Mam	LINE/RTE-X	4598	4728	(213)	3494758
211	40.0	3.3	4.9	chr6	125812598	125813065	(44992914)	+	L2	LINE/L2	2324	2783	(636)	3494856
2670	25.5	12.1	1.9	chr6	125945614	125946547	(44859432)	C	L2	LINE/L2	(870)	2549	1508	3495063
1457	32.6	6.2	10.1	chr6	125958906	125960377	(44845602)	C	L2c	LINE/L2	(816)	2603	1191	3495079
19	5.7	8.1	0.0	chr6	127340367	127340403	(43465576)	+	(TCTCTCC)n	Simple_repeat	1	40	(0)	3496757
17	19.0	0.0	0.0	chr6	131960890	131960926	(38845053)	+	GA-rich	Low_complexity	1	37	(0)	3503168
2091	16.3	2.3	1.8	chr6	132665279	132665666	(38140313)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3504125
29	5.1	4.9	0.0	chr6	133208345	133208385	(37597594)	+	(TC)n	Simple_repeat	1	43	(0)	3504933
2681	30.8	13.9	2.3	chr6	133805882	133806719	(36999260)	C	L2a	LINE/L2	(1118)	2301	1374	3505720
47	14.4	3.7	6.4	chr6	135344612	135344773	(35461206)	+	(CTTT)n	Simple_repeat	1	157	(0)	3508338
504	10.0	6.4	0.5	chr6	135344776	135344870	(35461109)	C	MER41B	LTR/ERV1	(62)	572	483	3508339
14	26.3	0.0	9.8	chr6	136662505	136662586	(34143393)	+	(CTTC)n	Simple_repeat	1	82	(0)	3510247
249	28.8	1.7	1.7	chr6	136662612	136662731	(34143248)	C	L1ME4c	LINE/L1	(377)	453	334	3510248
7835	7.4	1.3	1.8	chr6	139615716	139617638	(31188341)	C	L1PB1	LINE/L1	(1)	6150	4237	3514974
41	5.8	5.3	2.5	chr6	139617640	139617715	(31188264)	+	(CCTTTC)n	Simple_repeat	1	80	(0)	3514975
14	20.3	2.8	0.0	chr6	139617682	139617717	(31188262)	+	(CTTT)n	Simple_repeat	1	37	(0)	3514976
974	9.4	1.6	0.0	chr6	139617718	139617844	(31188135)	C	AluSc	SINE/Alu	(8)	301	173	3514977
293	27.9	1.6	1.6	chr6	142275692	142275815	(28530164)	C	MLT1A0	LTR/ERVL-MaLR	(0)	562	439	3518298
2020	14.8	2.6	1.0	chr6	144103280	144103308	(26702671)	C	AluSz6	SINE/Alu	(2)	310	282	3520859
119	0.0	0.0	0.9	chr6	144103309	144103416	(26702563)	+	(TTCCT)n	Simple_repeat	1	108	(0)	3520860
15	21.8	2.9	0.0	chr6	144216902	144216935	(26589044)	+	(TC)n	Simple_repeat	1	35	(0)	3521046
585	18.3	0.0	0.0	chr6	146808701	146808804	(23997175)	C	AluJb	SINE/Alu	(20)	292	189	3524528
1568	18.7	1.8	0.7	chr6	149334418	149334695	(21471284)	+	AluJr	SINE/Alu	21	301	(11)	3528275
190	26.9	19.7	1.8	chr6	149334799	149334968	(21471011)	C	L2	LINE/L2	(781)	2638	2431	3528276
700	20.5	1.6	0.0	chr6	149716211	149716332	(21089647)	+	FLAM_A	SINE/Alu	1	124	(18)	3529014
216	26.5	13.2	9.6	chr6	150154390	150154535	(20651444)	+	MIR3	SINE/MIR	53	204	(4)	3529765
1701	15.5	6.7	0.0	chr6	150826661	150826938	(19979041)	C	AluJr	SINE/Alu	(14)	298	1	3530825
49	16.7	1.7	4.1	chr6	150826945	150827063	(19978916)	+	(TCTT)n	Simple_repeat	1	121	(0)	3530826
897	12.0	0.0	1.6	chr6	150827068	150827192	(19978787)	C	AluJb	SINE/Alu	(187)	125	3	3530827
113	23.6	3.0	2.9	chr6	151171516	151171620	(19634359)	+	(TTTC)n	Simple_repeat	1	110	(0)	3531470
644	16.4	7.6	4.7	chr6	151171621	151171748	(19634231)	C	FLAM_A	SINE/Alu	(9)	133	2	3531471
113	23.6	3.0	2.9	chr6	151171749	151171917	(19634062)	+	(TTTC)n	Simple_repeat	3	169	(0)	3531472
54	0.0	3.6	0.0	chr6	151171918	151171973	(19634006)	+	(TCCCTTCCCC)n	Simple_repeat	1	58	(0)	3531473
47	8.3	0.0	0.0	chr6	151171982	151172046	(19633933)	+	(TTTC)n	Simple_repeat	1	65	(0)	3531474
143	24.6	3.3	1.8	chr6	152371571	152371999	(18433980)	+	GA-rich	Low_complexity	1	443	(0)	3533435
3436	19.5	14.0	0.8	chr6	152979051	152979958	(17826021)	C	L1MC3	LINE/L1	(33)	7752	6705	3534285
1413	12.6	1.1	3.2	chr6	155200932	155201177	(15604802)	C	L1MB7	LINE/L1	(162)	6018	5792	3537811
2207	8.1	0.0	7.5	chr6	156723003	156723324	(14082655)	+	AluSx	SINE/Alu	1	298	(14)	3539896
2033	13.4	1.0	0.7	chr6	157062192	157062489	(13743490)	C	AluJr	SINE/Alu	(4)	308	10	3540379
2606	25.8	11.7	1.3	chr6	157317057	157317930	(13488049)	+	L2	LINE/L2	1736	2712	(707)	3540704
55	10.7	2.6	4.3	chr6	157840407	157840519	(12965460)	+	(CTTT)n	Simple_repeat	1	116	(0)	3541566
2149	12.1	0.3	1.6	chr6	157984397	157984703	(12821276)	C	AluSq	SINE/Alu	(10)	303	1	3541776
790	24.3	10.7	4.1	chr6	158806364	158806702	(11999277)	C	L1MC5a	LINE/L1	(13)	2764	2401	3543147
37	22.9	2.2	5.6	chr6	161037996	161038134	(9767845)	+	(CCTT)n	Simple_repeat	1	142	(0)	3546134
16	9.3	0.0	0.0	chr6	163416049	163416075	(7389904)	+	(G)n	Simple_repeat	1	27	(0)	3549423
56	21.1	3.4	6.1	chr6	165998163	165998369	(4807610)	+	GA-rich	Low_complexity	1	214	(0)	3552654
14	22.6	1.8	5.2	chr6	167841886	167841942	(2964037)	+	(TTCC)n	Simple_repeat	1	58	(0)	3554861
497	34.2	7.8	0.0	chr6	167857259	167857460	(2948519)	+	L3	LINE/CR1	2903	3121	(978)	3554883
2436	6.0	0.7	1.0	chr7	615556	615854	(158730119)	+	AluYc	SINE/Alu	1	298	(1)	3558589
135	17.0	1.6	3.7	chr7	615855	616030	(158729943)	+	GA-rich	Low_complexity	136	308	(0)	3558590
15	13.3	3.0	0.0	chr7	616033	616065	(158729908)	+	(GCTGAG)n	Simple_repeat	1	34	(0)	3558591
1995	11.6	0.6	10.1	chr7	802578	802922	(158543051)	+	AluSz	SINE/Alu	1	312	(0)	3558914
312	32.1	9.2	3.1	chr7	802923	803099	(158542874)	+	L1ME4a	LINE/L1	1013	1205	(5898)	3558913
22	19.4	1.3	7.6	chr7	803102	803179	(158542794)	+	GA-rich	Low_complexity	1	79	(0)	3558915
1164	1.9	2.5	1.6	chr7	905360	906656	(158439317)	+	(GAAAGGA)n	Simple_repeat	1	1329	(0)	3559041
217	18.2	3.7	2.1	chr7	1526083	1526593	(157819380)	+	GA-rich	Low_complexity	1	530	(0)	3560036
31	2.6	0.0	4.7	chr7	2448747	2448789	(156897184)	+	(TCCCT)n	Simple_repeat	1	43	(0)	3561430
686	15.7	3.6	0.9	chr7	2448805	2448912	(156897061)	C	AluJo	SINE/Alu	(1)	311	201	3561431
161	27.7	2.0	1.6	chr7	2627187	2627677	(156718296)	+	GA-rich	Low_complexity	1	501	(0)	3561753
167	23.8	2.8	0.9	chr7	3279177	3279609	(156066364)	+	GA-rich	Low_complexity	1	445	(0)	3563051
188	17.9	9.7	1.8	chr7	4276620	4276676	(155069297)	+	MIRc	SINE/MIR	73	134	(134)	3564492
23	10.6	0.0	2.3	chr7	4276678	4276720	(155069253)	+	(CTTTCC)n	Simple_repeat	1	43	(0)	3564493
21	10.2	3.1	9.0	chr7	4276721	4276731	(155069242)	+	(CTTTC)n	Simple_repeat	1	52	(0)	3564494
2363	10.4	1.3	0.0	chr7	4276732	4277040	(155068933)	C	AluSp	SINE/Alu	(0)	313	1	3564495
1391	12.1	0.5	1.0	chr7	5776724	5776929	(153569044)	+	AluSz6	SINE/Alu	108	312	(0)	3567781
31	7.3	3.0	5.9	chr7	5776930	5776944	(153569029)	+	GA-rich	Low_complexity	1	26	(42)	3567782
15	21.1	0.0	0.0	chr7	5776945	5776973	(153569000)	+	A-rich	Low_complexity	1	29	(0)	3567783
31	7.3	3.0	5.9	chr7	5776974	5776995	(153568978)	+	GA-rich	Low_complexity	27	68	(0)	3567782
367	24.5	11.3	9.0	chr7	5777025	5777352	(153568621)	+	MLT1G1	LTR/ERVL-MaLR	200	579	(0)	3567784
1926	12.2	0.7	4.3	chr7	6086505	6086638	(153259335)	C	AluSx1	SINE/Alu	(169)	143	12	3568566
16	10.3	4.0	7.7	chr7	6086644	6086693	(153259280)	+	(CCCTT)n	Simple_repeat	1	52	(0)	3568568
28	0.0	7.1	2.2	chr7	6086696	6086737	(153259236)	+	(TTTCCT)n	Simple_repeat	1	45	(0)	3568569
2213	10.7	0.3	0.7	chr7	6086739	6087027	(153258946)	C	AluSq2	SINE/Alu	(25)	288	1	3568570
573	27.8	13.4	4.4	chr7	6247130	6247517	(153098456)	C	L1M6	LINE/L1	(4721)	1775	1353	3568880
1620	13.9	2.6	7.6	chr7	6247649	6247965	(153098008)	C	AluJr	SINE/Alu	(11)	301	1	3568882
360	34.1	6.2	5.8	chr7	6385275	6385498	(152960475)	C	MIR	SINE/MIR	(18)	244	20	3569254
45	3.6	8.5	3.9	chr7	6634172	6634265	(152711708)	+	A-rich	Low_complexity	1	102	(0)	3569860
31	15.7	9.8	3.0	chr7	6634266	6634292	(152711681)	+	GA-rich	Low_complexity	2	134	(0)	3569861
14	17.4	0.0	2.9	chr7	7740154	7740188	(151605785)	+	(CTTT)n	Simple_repeat	1	35	(0)	3571508
30	8.8	4.7	3.0	chr7	11478577	11478640	(147867333)	+	A-rich	Low_complexity	1	67	(0)	3576240
899	21.5	0.0	0.0	chr7	12888237	12888422	(146457551)	C	AluJb	SINE/Alu	(7)	305	120	3578001
286	25.1	0.0	0.0	chr7	12888424	12888497	(146457476)	C	AluJb	SINE/Alu	(115)	187	120	3578001
120	3.1	4.0	1.7	chr7	12888503	12888676	(146457297)	+	(TTTCC)n	Simple_repeat	1	181	(0)	3578002
857	16.2	0.0	0.7	chr7	12888678	12888813	(146457160)	C	FLAM_C	SINE/Alu	(8)	135	1	3578003
114	16.2	3.3	3.5	chr7	12996099	12996373	(146349600)	+	(TTCT)n	Simple_repeat	1	284	(0)	3578153
1844	15.8	1.7	1.4	chr7	12996380	12996727	(146349246)	C	L1MB1	LINE/L1	(5)	6163	5815	3578154
2050	13.3	1.4	1.0	chr7	13130746	13131039	(146214934)	+	AluSz	SINE/Alu	1	295	(17)	3578336
60	29.8	2.7	0.0	chr7	13131040	13131225	(146214748)	+	GA-rich	Low_complexity	1	191	(0)	3578337
33	0.0	0.0	0.0	chr7	13920442	13920469	(145425504)	+	(GT)n	Simple_repeat	1	28	(0)	3579355
18	31.3	2.5	4.9	chr7	16982660	16982735	(142363238)	+	(TTTC)n	Simple_repeat	1	96	(26)	3583286
22	0.0	0.0	0.0	chr7	16982736	16982759	(142363214)	+	(T)n	Simple_repeat	1	24	(0)	3583287
18	31.3	2.5	4.9	chr7	16982760	16982778	(142363195)	+	(TTTC)n	Simple_repeat	97	122	(0)	3583286
32	1.7	0.0	12.0	chr7	17316149	17316223	(142029750)	+	(ATGAA)n	Simple_repeat	1	75	(0)	3583728
51	26.2	4.0	2.9	chr7	18421338	18421537	(140924436)	+	A-rich	Low_complexity	1	208	(0)	3585298
13	18.9	2.8	0.0	chr7	20218072	20218107	(139127866)	+	(TTTTGTG)n	Simple_repeat	1	37	(0)	3587456
1758	17.0	1.0	2.9	chr7	21215415	21215440	(138130533)	C	7SLRNA	srpRNA	(0)	320	301	3588875
90	0.0	4.3	0.0	chr7	21215441	21215533	(138130440)	+	(CCTTTC)n	Simple_repeat	1	97	(0)	3588876
1758	17.0	1.0	2.9	chr7	21215534	21215812	(138130161)	C	7SLRNA	srpRNA	(20)	300	21	3588875
316	22.4	1.5	1.5	chr7	26718139	26718206	(132627767)	+	L2b	LINE/L2	3358	3425	(1)	3597437
75	0.0	0.0	0.0	chr7	26955664	26955730	(132390243)	+	(GGAAA)n	Simple_repeat	1	67	(0)	3597787
531	32.1	7.9	4.7	chr7	27080774	27081089	(132264884)	C	L2c	LINE/L2	(0)	3387	3060	3597996
11	27.3	2.0	2.0	chr7	27133636	27133685	(132212288)	+	G-rich	Low_complexity	1	51	(0)	3598049
36	0.0	0.0	0.0	chr7	27140002	27140032	(132205941)	+	(AG)n	Simple_repeat	1	31	(0)	3598050
17	7.4	3.5	0.0	chr7	27171367	27171395	(132174578)	+	(AAGA)n	Simple_repeat	1	30	(0)	3598079
17	0.0	0.0	0.0	chr7	27605457	27605475	(131740498)	+	(T)n	Simple_repeat	1	19	(0)	3598718
466	28.6	18.4	4.1	chr7	27611804	27612117	(131733856)	+	L2a	LINE/L2	3002	3370	(56)	3598727
139	0.9	9.4	0.4	chr7	28110452	28110666	(131235307)	+	(AAAGGA)n	Simple_repeat	1	234	(0)	3599502
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
33	33.0	3.7	3.2	chr7	29612019	29612234	(129733739)	+	GA-rich	Low_complexity	1	216	(0)	3601853
11654	18.2	7.4	2.6	chr7	30491381	30494024	(128851949)	C	L1MD1	LINE/L1	(3749)	2788	15	3603194
92	14.7	2.5	5.8	chr7	30528843	30529082	(128816891)	+	GA-rich	Low_complexity	1	232	(0)	3603267
428	25.4	14.2	3.5	chr7	30529085	30529504	(128816469)	+	L1M4	LINE/L1	5188	5654	(649)	3603268
229	27.9	6.1	4.1	chr7	35250769	35250865	(124095108)	+	MIR3	SINE/MIR	99	197	(11)	3610383
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
24	14.4	0.0	0.0	chr7	40133877	40133915	(119212058)	+	(A)n	Simple_repeat	1	39	(0)	3617868
2360	10.9	0.3	0.0	chr7	42155158	42155468	(117190505)	+	AluSp	SINE/Alu	1	312	(1)	3620809
21	30.0	1.1	3.2	chr7	42214456	42214547	(117131426)	+	A-rich	Low_complexity	1	93	(0)	3620906
212	20.0	3.2	2.0	chr7	43335675	43336198	(116009775)	+	(TCTT)n	Simple_repeat	1	541	(0)	3622487
878	22.1	2.2	10.9	chr7	43834507	43834800	(115511173)	C	LTR12F	LTR/ERV1	(15)	504	237	3623246
66	12.1	8.9	3.4	chr7	44547559	44547748	(114798225)	+	A-rich	Low_complexity	1	207	(0)	3624386
1025	19.3	0.6	0.0	chr7	44547750	44547915	(114798058)	+	AluJo	SINE/Alu	130	296	(16)	3624387
5308	10.4	1.5	1.2	chr7	44556705	44557520	(114788453)	C	L1PREC2	LINE/L1	(2)	6158	5341	3624409
371	19.8	8.2	0.0	chr7	44557503	44557622	(114788351)	+	L1M4	LINE/L1	4662	4792	(1955)	3624376
24	10.6	5.6	1.8	chr7	44557623	44557695	(114788278)	+	G-rich	Low_complexity	1	75	(0)	3624410
377	21.9	4.5	17.2	chr7	44557696	44557806	(114788167)	+	L1M4	LINE/L1	4752	4849	(1892)	3624376
862	19.4	22.9	3.7	chr7	44857025	44857472	(114488501)	+	LTR50	LTR/ERVL	37	702	(93)	3625040
30	11.5	2.7	5.3	chr7	47514545	47514617	(111831356)	+	(TCTCCTT)n	Simple_repeat	1	75	(0)	3628620
2155	14.2	0.0	1.9	chr7	52322919	52323235	(107022738)	C	AluSx1	SINE/Alu	(1)	311	1	3634761
173	25.5	1.9	0.8	chr7	54722465	54722936	(104623037)	+	(TC)n	Simple_repeat	1	481	(0)	3637710
916	23.2	8.1	0.0	chr7	64563485	64563768	(94782205)	C	MER33	DNA/hAT-Charlie	(15)	309	1	3646434
31	10.9	3.1	3.0	chr7	64563802	64563865	(94782108)	+	(CTTTT)n	Simple_repeat	1	66	(0)	3646435
1879	18.9	0.0	0.6	chr7	64563867	64564178	(94781795)	C	AluSz6	SINE/Alu	(1)	311	2	3646436
268	28.4	2.7	1.8	chr7	66508470	66508580	(92837393)	C	L1ME4a	LINE/L1	(47)	6077	5966	3650139
83	24.4	2.8	1.9	chr7	66508581	66508774	(92837199)	+	(TTCC)n	Simple_repeat	1	194	(0)	3650140
243	33.8	5.2	7.8	chr7	66732858	66733114	(92612859)	+	L2	LINE/L2	2702	2951	(468)	3650692
203	12.6	2.3	6.0	chr7	66865532	66866001	(92479972)	+	(CCCTT)n	Simple_repeat	1	481	(0)	3650996
215	27.2	1.7	0.8	chr7	69134434	69135024	(90210949)	+	(CT)n	Simple_repeat	1	601	(0)	3655990
18	4.8	0.0	0.0	chr7	69600536	69600557	(89745416)	+	(T)n	Simple_repeat	1	22	(0)	3657069
13	13.6	9.8	0.0	chr7	69600594	69600634	(89745339)	+	G-rich	Low_complexity	1	45	(0)	3657070
20	0.0	0.0	0.0	chr7	70696675	70696696	(88649277)	+	(AC)n	Simple_repeat	1	22	(0)	3658705
107	16.7	2.1	5.8	chr7	71753305	71753590	(87592383)	+	(TTCT)n	Simple_repeat	1	292	(0)	3660870
475	23.9	3.1	5.4	chr7	71753592	71753721	(87592252)	C	FLAM_A	SINE/Alu	(8)	134	8	3660871
755	17.9	0.8	0.0	chr7	73631590	73631706	(85714267)	C	AluJr	SINE/Alu	(194)	118	1	3665096
45	32.2	2.2	5.7	chr7	73631715	73631938	(85714035)	+	(TTCCT)n	Simple_repeat	1	262	(18)	3665097
17	24.6	0.0	0.0	chr7	73631939	73631974	(85713999)	+	(T)n	Simple_repeat	1	36	(0)	3665098
459	18.5	4.0	0.6	chr7	73648321	73649365	(85696608)	+	(CT)n	Simple_repeat	1	1087	(0)	3665149
47	46.4	1.4	2.8	chr7	73762636	73763027	(85582946)	+	(CCCT)n	Simple_repeat	1	386	(0)	3665409
645	22.3	7.4	2.2	chr7	73851577	73851805	(85494168)	C	L1M5	LINE/L1	(705)	5537	5296	3665632
902	19.3	0.6	1.2	chr7	73851818	73851990	(85493983)	C	L1MA8	LINE/L1	(5)	6286	6115	3665633
86	29.7	3.2	0.3	chr7	74371508	74371787	(84974186)	+	GA-rich	Low_complexity	1	289	(0)	3666909
1277	24.6	11.4	2.9	chr7	74656107	74656620	(84689353)	+	Tigger13a	DNA/TcMar-Tigger	61	623	(148)	3667693
2544	12.4	1.8	23.7	chr7	74686021	74686347	(84659626)	C	MER51A	LTR/ERV1	(405)	229	1	3667760
224	24.2	4.4	1.0	chr7	76280745	76281432	(83064541)	+	(CT)n	Simple_repeat	1	718	(0)	3671774
5794	23.5	5.3	4.5	chr7	77399716	77401883	(81944090)	+	L1MDa	LINE/L1	31	2309	(4324)	3673701
18	17.3	4.0	6.5	chr7	77766795	77766868	(81579105)	+	(CTTTTC)n	Simple_repeat	1	77	(0)	3674448
19	17.0	8.1	4.3	chr7	77766869	77766879	(81579094)	+	(TCTCTTT)n	Simple_repeat	2	93	(0)	3674449
67	7.0	4.7	0.0	chr7	77767000	77767106	(81578867)	+	(TTCCCC)n	Simple_repeat	1	112	(0)	3674450
17	13.4	5.5	5.2	chr7	80134270	80134324	(79211649)	+	GA-rich	Low_complexity	1	58	(0)	3677729
180	34.6	0.0	0.0	chr7	80212467	80212518	(79133455)	+	L2b	LINE/L2	3317	3368	(7)	3677851
52	2.1	0.0	0.0	chr7	84195005	84195053	(75150920)	+	(AG)n	Simple_repeat	1	49	(0)	3683242
40	4.8	0.0	0.0	chr7	84196354	84196396	(75149577)	+	(TC)n	Simple_repeat	1	43	(0)	3683245
952	24.2	15.8	4.4	chr7	85077748	85078248	(74267725)	+	L1ME4a	LINE/L1	5528	6096	(28)	3684334
53	8.9	0.0	4.3	chr7	85078283	85078375	(74267598)	+	(AAGG)n	Simple_repeat	1	93	(0)	3684335
38	28.3	2.5	0.0	chr7	87209337	87209455	(72136518)	+	GA-rich	Low_complexity	1	122	(0)	3686924
257	19.5	7.0	1.5	chr7	87209457	87209659	(72136314)	+	HERVIP10FH-int	LTR/ERV1	784	998	(4104)	3686925
42	42.2	0.6	3.5	chr7	87548028	87548412	(71797561)	+	A-rich	Low_complexity	1	373	(0)	3687344
109	15.3	3.6	4.5	chr7	90446442	90446718	(68899255)	+	(TTTCC)n	Simple_repeat	1	287	(0)	3691094
2526	11.2	2.4	1.1	chr7	90463116	90463485	(68882488)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3691127
10571	11.8	3.3	0.6	chr7	90463488	90463525	(68882448)	+	THE1C-int	LTR/ERVL-MaLR	3	59	(1572)	3691128
32	0.0	0.0	7.0	chr7	90463526	90463568	(68882405)	+	(GTGAAA)n	Simple_repeat	1	43	(0)	3691129
10571	11.8	3.3	0.6	chr7	90463569	90465114	(68880859)	+	THE1C-int	LTR/ERVL-MaLR	60	1630	(1)	3691128
241	27.7	12.9	3.9	chr7	92230511	92230664	(67115309)	C	L2c	LINE/L2	(1475)	1944	1775	3693551
295	27.2	11.4	3.9	chr7	95689203	95689248	(63656725)	+	MLT1K	LTR/ERVL-MaLR	368	416	(179)	3698356
33	4.6	0.0	4.1	chr7	95689249	95689297	(63656676)	+	(GAGTGA)n	Simple_repeat	1	49	(0)	3698357
295	27.2	11.4	3.9	chr7	95689298	95689453	(63656520)	+	MLT1K	LTR/ERVL-MaLR	417	587	(8)	3698356
13	19.4	0.0	2.7	chr7	95917191	95917227	(63428746)	+	(CTGTGGA)n	Simple_repeat	1	37	(0)	3698640
15	5.6	0.0	0.0	chr7	96986960	96986978	(62358995)	+	(A)n	Simple_repeat	1	19	(0)	3700137
56	10.2	0.0	0.0	chr7	97734434	97734517	(61611456)	+	(TC)n	Simple_repeat	1	84	(0)	3701216
276	10.5	0.0	0.0	chr7	98745957	98745994	(60599979)	C	MER77B	LTR/ERVL	(72)	628	591	3703302
31	17.8	2.5	1.2	chr7	98745995	98746051	(60599922)	+	(TTTGT)n	Simple_repeat	1	56	(0)	3703303
99	16.8	4.1	2.8	chr7	98863613	98863855	(60482118)	+	(CCTT)n	Simple_repeat	1	253	(0)	3703597
1142	19.3	5.7	1.8	chr7	98863856	98863877	(60482096)	C	AluJb	SINE/Alu	(0)	312	292	3703598
31	3.3	0.0	0.0	chr7	98863878	98863908	(60482065)	+	(CT)n	Simple_repeat	1	31	(0)	3703599
1142	19.3	5.7	1.8	chr7	98863909	98864103	(60481870)	C	AluJb	SINE/Alu	(21)	291	86	3703598
262	26.1	2.5	9.4	chr7	99135226	99135352	(60210621)	C	HAL1ME	LINE/L1	(0)	2465	2348	3704026
1424	27.6	4.7	2.2	chr7	99135463	99136004	(60209969)	C	L1ME4b	LINE/L1	(200)	692	137	3704027
884	14.3	0.0	0.0	chr7	99273612	99273744	(60072229)	+	FLAM_C	SINE/Alu	1	133	(10)	3704350
44	29.2	0.0	6.7	chr7	99273745	99273938	(60072035)	+	A-rich	Low_complexity	1	194	(0)	3704351
230	19.6	20.3	8.1	chr7	99370490	99370600	(59975373)	C	MIRc	SINE/MIR	(88)	180	53	3704590
16	11.7	0.0	0.0	chr7	99675112	99675139	(59670834)	+	(TGAG)n	Simple_repeat	1	28	(0)	3705181
1776	20.9	0.7	0.0	chr7	100492617	100492918	(58853055)	+	AluJo	SINE/Alu	1	304	(8)	3706708
32	29.4	1.8	1.7	chr7	100492925	100493037	(58852936)	+	GA-rich	Low_complexity	1	115	(0)	3706709
1794	15.3	0.7	6.8	chr7	100493060	100493385	(58852588)	+	AluJr	SINE/Alu	2	307	(5)	3706710
1677	14.3	3.0	4.0	chr7	100588822	100589121	(58756852)	C	AluJr	SINE/Alu	(6)	306	10	3706905
1844	11.5	8.7	4.0	chr7	100671121	100671447	(58674526)	C	L1PA16	LINE/L1	(9)	6157	5814	3707110
31	12.9	4.0	3.9	chr7	100671451	100671525	(58674448)	+	(TTTC)n	Simple_repeat	1	78	(0)	3707111
303	0.0	2.3	0.0	chr7	100671527	100671568	(58674405)	C	L1P4	LINE/L1	(310)	5856	5814	3707112
27	14.1	8.5	1.1	chr7	100671569	100671639	(58674334)	+	(TTCCT)n	Simple_repeat	1	76	(0)	3707113
2269	10.9	0.0	1.3	chr7	100671640	100671942	(58674031)	C	AluSz	SINE/Alu	(0)	312	14	3707114
31	0.0	3.0	0.0	chr7	100725532	100725564	(58620409)	+	(TTTCT)n	Simple_repeat	1	34	(0)	3707217
2217	8.2	0.0	0.4	chr7	100725566	100725844	(58620129)	C	AluSx1	SINE/Alu	(33)	279	2	3707218
16	24.7	4.9	5.6	chr7	100744752	100744853	(58601120)	+	(TTTTCC)n	Simple_repeat	1	107	(0)	3707266
2514	6.2	0.7	0.0	chr7	100744874	100745178	(58600795)	C	AluSx1	SINE/Alu	(0)	312	6	3707267
24	17.9	0.0	0.0	chr7	101122180	101122223	(58223750)	+	GA-rich	Low_complexity	1	44	(0)	3708043
19	23.7	1.6	3.1	chr7	101122295	101122398	(58223575)	+	A-rich	Low_complexity	1	102	(0)	3708044
443	30.2	12.8	0.0	chr7	101143509	101143740	(58202233)	+	L1MC4	LINE/L1	964	1229	(4986)	3708093
14	15.4	7.9	4.4	chr7	101167243	101167305	(58178668)	+	GA-rich	Low_complexity	1	68	(0)	3708144
289	31.7	12.2	0.6	chr7	101769827	101770007	(57575966)	C	MIRc	SINE/MIR	(35)	233	29	3709630
13	22.6	0.0	0.0	chr7	101770016	101770048	(57575925)	+	(TTTC)n	Simple_repeat	1	33	(0)	3709631
547	30.7	8.3	3.0	chr7	101770049	101770189	(57575784)	C	L1MC4	LINE/L1	(4986)	1229	1091	3709632
2613	6.1	0.0	0.0	chr7	101770190	101770500	(57575473)	C	AluY	SINE/Alu	(0)	311	1	3709633
547	32.7	7.1	2.2	chr7	101770501	101770767	(57575206)	C	L1MC4	LINE/L1	(4986)	1229	950	3709632
1205	18.8	1.5	0.0	chr7	101772376	101772577	(57573396)	+	AluSx4	SINE/Alu	105	309	(1)	3709639
58	31.8	3.2	0.8	chr7	101772582	101772868	(57573105)	+	GA-rich	Low_complexity	1	293	(0)	3709640
15	18.9	3.6	5.2	chr7	104848620	104848675	(54497298)	+	A-rich	Low_complexity	1	58	(0)	3714694
2084	14.1	1.3	4.1	chr7	105278392	105278711	(54067262)	+	AluSx	SINE/Alu	1	311	(1)	3715438
25	26.3	4.2	4.0	chr7	105278713	105278831	(54067142)	+	A-rich	Low_complexity	1	124	(0)	3715439
717	22.9	9.3	0.5	chr7	105278832	105279055	(54066918)	+	Tigger18a	DNA/TcMar-Tigger	496	741	(111)	3715440
4653	18.0	10.8	4.5	chr7	105445964	105446480	(53899493)	+	L1MB8	LINE/L1	1690	2226	(4525)	3715855
1897	22.8	12.7	10.1	chr7	105527023	105527637	(53818336)	C	HAL1	LINE/L1	(127)	2380	1669	3716053
579	31.4	12.3	2.5	chr7	107680978	107681378	(51664595)	C	Tigger15a	DNA/TcMar-Tigger	(253)	462	17	3719441
16	18.6	1.5	8.8	chr7	108423251	108423317	(50922656)	+	A-rich	Low_complexity	1	68	(0)	3720503
107	11.3	2.9	3.2	chr7	111384155	111384364	(47961609)	+	GA-rich	Low_complexity	1	216	(0)	3724257
238	34.5	3.5	2.3	chr7	112566933	112567018	(46778955)	+	MER131	DNA?	7	93	(122)	3726012
191	36.9	7.2	1.9	chr7	112789465	112789569	(46556404)	C	MIRc	SINE/MIR	(140)	128	18	3726299
37	16.2	4.6	4.4	chr7	114263341	114263449	(45082524)	+	(TTCCT)n	Simple_repeat	1	114	(0)	3728189
909	20.2	0.6	0.6	chr7	114263450	114263617	(45082356)	C	FRAM	SINE/Alu	(8)	168	1	3728190
17	0.0	0.0	0.0	chr7	114416511	114416529	(44929444)	+	(A)n	Simple_repeat	1	19	(0)	3728379
14390	13.2	2.4	5.4	chr7	116323200	116324616	(43021357)	+	Tigger1	DNA/TcMar-Tigger	1	1320	(1098)	3730894
13	21.9	2.3	2.2	chr7	116524797	116524840	(42821133)	+	(CTCGCTG)n	Simple_repeat	1	45	(0)	3731164
1611	18.9	4.3	1.6	chr7	116629430	116629680	(42716293)	C	MER58D	DNA/hAT-Charlie	(1)	385	129	3731326
724	29.7	0.7	2.5	chr7	116630179	116630461	(42715512)	+	LTR81A	LTR/Gypsy	18	295	(1055)	3731328
549	24.5	6.9	1.8	chr7	116630569	116630734	(42715239)	+	MIRb	SINE/MIR	88	262	(6)	3731329
2025	14.5	0.0	0.3	chr7	116874807	116875089	(42470884)	+	AluSz	SINE/Alu	1	282	(30)	3731686
64	36.5	4.4	0.0	chr7	116950294	116950587	(42395386)	+	(CTCT)n	Simple_repeat	4	310	(0)	3731845
1940	20.9	3.1	0.8	chr7	117840893	117841395	(41504578)	C	Charlie1b	DNA/hAT-Charlie	(1)	522	8	3733078
13	13.9	4.7	4.4	chr7	120949731	120949773	(38396200)	+	(TGAACAA)n	Simple_repeat	1	45	(0)	3737031
116	10.2	0.9	4.2	chr7	122272454	122272664	(37073309)	+	(TTTC)n	Simple_repeat	1	213	(0)	3738888
292	18.9	1.9	0.0	chr7	122272665	122272717	(37073256)	+	MER63B	DNA/hAT-Blackjack	383	436	(0)	3738889
770	28.4	5.8	6.8	chr7	123547287	123547545	(35798428)	+	L2a	LINE/L2	3170	3425	(1)	3740573
1594	23.4	6.4	3.2	chr7	128699523	128700082	(30645891)	C	L1M5	LINE/L1	(3306)	2840	2262	3747818
407	19.0	2.1	0.6	chr7	128700089	128700195	(30645778)	C	FRAM	SINE/Alu	(0)	166	94	3747819
2387	9.5	0.0	0.7	chr7	129284316	129284619	(30061354)	+	AluSx	SINE/Alu	1	302	(10)	3748874
258	32.5	9.3	3.0	chr7	129869970	129870331	(29475642)	+	L2a	LINE/L2	1428	1814	(1605)	3749996
843	29.8	6.0	4.2	chr7	131323242	131323733	(28022240)	C	ERV24_Prim-int	LTR/ERV1	(6234)	1341	831	3752604
1158	22.8	10.6	13.1	chr7	131444958	131445674	(27900299)	C	L1MC5a	LINE/L1	(1557)	1220	524	3752813
236	21.9	0.0	0.0	chr7	131449752	131449792	(27896181)	C	MER5B	DNA/hAT-Charlie	(137)	41	1	3752829
230	25.0	3.7	0.0	chr7	131449827	131449878	(27896095)	+	MIRc	SINE/MIR	90	143	(125)	3752830
149	28.9	0.8	3.5	chr7	132151175	132151660	(27194313)	+	GA-rich	Low_complexity	1	490	(0)	3753993
460	31.8	11.0	3.3	chr7	132698026	132698929	(26647044)	+	L1MC4	LINE/L1	942	2205	(4105)	3754795
15	16.3	4.7	2.2	chr7	134779647	134779689	(24566284)	+	(CTGC)n	Simple_repeat	1	45	(0)	3758022
142	15.2	8.2	3.0	chr7	136082676	136083105	(23262868)	+	(CTTTC)n	Simple_repeat	1	452	(0)	3760114
56	1.9	0.0	0.0	chr7	136274997	136275051	(23070922)	+	(CTTC)n	Simple_repeat	1	55	(0)	3760390
98	15.8	4.7	2.0	chr7	136275059	136275293	(23070680)	+	(CTTT)n	Simple_repeat	1	246	(0)	3760391
1711	17.2	2.0	2.3	chr7	137916435	137916736	(21429237)	+	AluJo	SINE/Alu	2	302	(10)	3762585
42	16.6	4.2	0.0	chr7	137916744	137916838	(21429135)	+	(GAGCGA)n	Simple_repeat	1	99	(0)	3762586
12167	13.4	5.9	8.2	chr7	138541300	138542675	(20803298)	C	Tigger1	DNA/TcMar-Tigger	(946)	1421	1	3763815
839	28.0	4.6	0.4	chr7	139038588	139038838	(20307135)	+	LTR16C	LTR/ERVL	224	485	(4)	3764786
838	24.6	3.9	0.8	chr7	139778909	139779158	(19566815)	+	MER112	DNA/hAT-Charlie	1	258	(3)	3766166
1849	16.9	9.6	7.3	chr7	140507910	140508374	(18837599)	+	MER34A	LTR/ERV1	3	479	(92)	3767638
247	28.9	1.9	1.9	chr7	140596920	140597025	(18748948)	C	Eulor9A	DNA	(194)	107	2	3767837
300	30.9	8.7	0.8	chr7	140597036	140597162	(18748811)	+	L1MEg	LINE/L1	1961	2098	(4144)	3767838
384	28.6	9.5	9.0	chr7	140807218	140807540	(18538433)	+	L1ME3G	LINE/L1	364	692	(200)	3768200
17	17.8	0.0	2.4	chr7	140807541	140807581	(18538392)	+	A-rich	Low_complexity	1	41	(0)	3768201
1678	27.1	7.8	4.1	chr7	140812686	140813806	(18532167)	+	L1MC5a	LINE/L1	7	696	(2081)	3768212
19	4.3	0.0	0.0	chr7	141071482	141071505	(18274468)	+	(GA)n	Simple_repeat	1	24	(0)	3768721
38	36.0	1.8	4.3	chr7	147452810	147453081	(11892892)	+	GA-rich	Low_complexity	1	277	(0)	3777273
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
688	22.6	0.5	8.7	chr7	149060183	149060348	(10285625)	+	MER58B	DNA/hAT-Charlie	120	273	(68)	3779923
273	28.3	14.6	5.1	chr7	149060349	149060564	(10285409)	+	L2c	LINE/L2	2726	2965	(454)	3779927
1306	10.0	0.0	0.0	chr7	149064996	149065165	(10280808)	+	AluSz6	SINE/Alu	135	304	(8)	3779938
277	26.8	34.4	0.0	chr7	149565371	149565538	(9780435)	+	L1MEd	LINE/L1	3869	4094	(2052)	3780862
1246	26.0	7.4	7.9	chr7	149669295	149670017	(9675956)	C	L1MEg	LINE/L1	(4856)	2477	1753	3781013
1199	31.0	5.0	5.4	chr7	149670090	149670587	(9675386)	C	L1MEg	LINE/L1	(5586)	649	154	3781013
1811	27.7	4.9	0.4	chr7	149670623	149671089	(9674884)	C	L1MEg1	LINE/L1	(5737)	498	10	3781017
184	19.4	0.0	0.0	chr7	150421349	150421384	(8924589)	+	L2a	LINE/L2	3391	3426	(0)	3782041
293	23.5	9.6	0.0	chr7	151158072	151158156	(8187817)	+	MLT1K	LTR/ERVL-MaLR	498	591	(4)	3782974
12	20.4	8.6	1.6	chr7	151252224	151252281	(8093692)	+	GA-rich	Low_complexity	1	63	(0)	3783107
21	7.6	0.0	0.0	chr7	151252414	151252441	(8093532)	+	(TG)n	Simple_repeat	1	28	(0)	3783108
42	15.3	1.4	0.0	chr7	151252441	151252513	(8093460)	+	GA-rich	Low_complexity	1	74	(0)	3783109
83	19.8	6.7	2.4	chr7	152487141	152487409	(6858564)	+	(TTCCTC)n	Simple_repeat	1	287	(0)	3785250
131	4.7	9.2	2.8	chr7	153964780	153965044	(5380929)	+	(TCCTT)n	Simple_repeat	1	281	(0)	3787684
35319	18.8	4.1	4.9	chr7	154925107	154928743	(4417230)	C	ERV24B_Prim-int	LTR/ERV1	(1815)	3679	23	3788913
30	3.1	0.0	0.0	chr7	155506552	155506584	(3839389)	+	(CAAA)n	Simple_repeat	1	33	(0)	3789719
57	12.4	3.1	0.0	chr7	155509462	155509558	(3836415)	+	GA-rich	Low_complexity	1	100	(0)	3789721
271	25.4	3.0	11.0	chr7	155765777	155765922	(3580051)	+	MER5B	DNA/hAT-Charlie	36	169	(9)	3790074
25	38.3	0.7	2.1	chr7	156950515	156950657	(2395316)	+	GA-rich	Low_complexity	1	144	(0)	3791615
16	15.9	0.0	0.0	chr7	157159309	157159336	(2186637)	+	A-rich	Low_complexity	1	28	(0)	3791975
595	25.9	4.8	1.8	chr7	158907309	158907528	(438445)	+	L1ME3F	LINE/L1	5886	6112	(131)	3793896
49	4.8	3.1	0.0	chr7	158907538	158907602	(438371)	+	(TCCCTT)n	Simple_repeat	1	67	(0)	3793897
1869	16.3	0.3	1.4	chr7	158907624	158907911	(438062)	C	AluJo	SINE/Alu	(26)	286	2	3793898
152	12.1	1.1	2.9	chr8	6150542	6150815	(138987821)	+	A-rich	Low_complexity	1	277	(0)	3801571
42	0.0	0.0	0.0	chr8	6150829	6150867	(138987769)	+	(AAAAG)n	Simple_repeat	1	39	(0)	3801572
1697	28.4	7.8	6.0	chr8	6150871	6151733	(138986903)	+	L1MC5	LINE/L1	7866	8746	(558)	3801573
118	26.6	0.9	2.6	chr8	8399805	8400142	(136738494)	+	(TTTC)n	Simple_repeat	1	341	(0)	3804637
1669	21.4	1.0	0.0	chr8	8843302	8843610	(136295026)	+	AluJb	SINE/Alu	1	312	(0)	3805436
122	0.0	0.0	0.0	chr8	9283285	9283390	(135855246)	+	(TTCCT)n	Simple_repeat	1	106	(0)	3806239
289	27.1	5.1	0.0	chr8	9555421	9555524	(135583112)	C	MIRb	SINE/MIR	(15)	253	130	3806713
59	9.4	7.8	0.0	chr8	9792570	9792687	(135345949)	+	G-rich	Low_complexity	1	127	(0)	3807052
31	25.6	1.7	3.4	chr8	10720285	10720463	(134418173)	+	(ATGG)n	Simple_repeat	1	175	(0)	3808534
86	15.8	2.4	4.7	chr8	10720457	10720665	(134417971)	+	A-rich	Low_complexity	1	214	(0)	3808535
22	31.8	4.5	1.4	chr8	10720672	10720803	(134417833)	+	(GGAT)n	Simple_repeat	1	138	(0)	3808536
2315	10.9	0.6	0.0	chr8	11189875	11190185	(133948451)	+	AluSq	SINE/Alu	1	313	(0)	3809229
71	5.5	6.0	0.8	chr8	11190186	11190304	(133948332)	+	(AAAGA)n	Simple_repeat	1	125	(0)	3809230
1082	6.8	0.0	0.0	chr8	11587637	11587768	(133550868)	+	AluSx3	SINE/Alu	165	296	(15)	3809834
651	29.8	6.4	0.5	chr8	11804026	11804231	(133334405)	C	L2a	LINE/L2	(0)	3426	3208	3810180
349	24.0	2.8	0.9	chr8	11804311	11804415	(133334221)	+	L1ME4b	LINE/L1	746	852	(40)	3810181
51	30.6	2.8	2.3	chr8	13444955	13445167	(131693469)	+	GA-rich	Low_complexity	1	219	(0)	3812698
62	32.3	3.4	4.2	chr8	14656356	14656704	(130481932)	+	(TTCTT)n	Simple_repeat	1	361	(0)	3814304
1961	10.9	0.8	0.0	chr8	14889977	14890233	(130248403)	+	AluSx4	SINE/Alu	41	299	(11)	3814625
10940	15.1	3.7	2.8	chr8	14890234	14892085	(130246551)	+	Tigger1	DNA/TcMar-Tigger	560	2417	(1)	3814624
20	21.4	6.0	3.4	chr8	16735892	16735974	(128402662)	+	GA-rich	Low_complexity	1	88	(0)	3817162
1163	27.8	7.6	7.8	chr8	17269014	17269816	(127868820)	C	HAL1	LINE/L1	(27)	2480	1680	3817955
37	9.6	2.9	1.4	chr8	17499322	17499391	(127639245)	+	(TC)n	Simple_repeat	1	72	(0)	3818286
12647	14.7	3.4	2.4	chr8	17710019	17712156	(127426480)	C	Tigger1	DNA/TcMar-Tigger	(177)	2241	94	3818600
306	30.1	14.6	1.2	chr8	17851038	17851224	(127287412)	+	MIR	SINE/MIR	54	262	(0)	3818813
43	30.9	3.7	5.5	chr8	17883783	17883872	(127254764)	+	(TTTCC)n	Simple_repeat	1	311	(38)	3818885
33	34.2	1.6	5.8	chr8	17883873	17884129	(127254507)	+	(TTTC)n	Simple_repeat	1	261	(0)	3818886
17248	27.8	2.7	2.6	chr8	17908096	17912373	(127226263)	C	HERVK-int	LTR/ERVK	(0)	7536	3280	3818929
1782	15.2	5.3	1.4	chr8	17927125	17927414	(127211222)	C	AluSz	SINE/Alu	(10)	302	1	3818946
455	26.1	15.2	0.5	chr8	18727850	18728046	(126410590)	+	L2a	LINE/L2	3157	3426	(0)	3820033
4497	18.7	10.4	0.7	chr8	19801894	19802772	(125335864)	+	LTR28B	LTR/ERV1	1	974	(0)	3821809
37	11.4	6.5	2.0	chr8	19885483	19885595	(125253041)	+	(CTTCTCC)n	Simple_repeat	1	118	(0)	3821946
1912	16.8	4.2	0.7	chr8	19885596	19885892	(125252744)	C	AluJb	SINE/Alu	(4)	308	1	3821947
38	0.0	0.0	0.0	chr8	21093648	21093682	(124044954)	+	(AGGG)n	Simple_repeat	1	35	(0)	3823889
69	27.8	3.5	5.2	chr8	21093683	21093953	(124044683)	+	GA-rich	Low_complexity	103	365	(0)	3823890
49	17.4	4.1	1.6	chr8	21788807	21788927	(123349709)	+	(TCTC)n	Simple_repeat	1	126	(0)	3825006
154	17.4	1.7	3.4	chr8	21887924	21888273	(123250363)	+	A-rich	Low_complexity	1	356	(0)	3825224
480	28.5	8.3	0.6	chr8	21888292	21888457	(123250179)	+	MIR3	SINE/MIR	27	206	(2)	3825225
15	20.5	2.5	0.0	chr8	22059138	22059177	(123079459)	+	G-rich	Low_complexity	1	41	(0)	3825501
43	30.4	3.5	3.7	chr8	22068562	22068777	(123069859)	+	GA-rich	Low_complexity	1	215	(0)	3825523
362	24.2	8.2	3.1	chr8	22442741	22442936	(122695700)	C	Tigger15a	DNA/TcMar-Tigger	(161)	554	348	3826240
371	24.8	7.1	0.0	chr8	22442961	22443065	(122695571)	C	Tigger15a	DNA/TcMar-Tigger	(433)	282	170	3826240
2497	13.8	4.5	2.5	chr8	23133014	23133087	(122005549)	+	MER83	LTR/ERV1	1	75	(373)	3827417
3317	10.8	0.2	1.7	chr8	23133088	23133427	(122005209)	+	MER4A1	LTR/ERV1	2	339	(133)	3827418
217	23.7	2.6	12.6	chr8	23404448	23404534	(121734102)	+	L2c	LINE/L2	3305	3382	(5)	3827852
254	6.7	0.0	0.0	chr8	25065588	25065617	(120073019)	+	U6	snRNA	1	30	(77)	3830425
88	10.5	5.3	1.1	chr8	25087968	25088136	(120050500)	+	G-rich	Low_complexity	1	178	(0)	3830472
2056	15.3	0.3	2.2	chr8	25809460	25809773	(119328863)	C	AluSz	SINE/Alu	(4)	308	1	3831667
393	25.0	14.3	6.8	chr8	26310493	26310788	(118827848)	C	L1M5	LINE/L1	(307)	5817	5496	3832527
51	32.3	1.1	2.1	chr8	27648803	27648990	(117489646)	+	GA-rich	Low_complexity	1	190	(0)	3834738
14	28.6	2.6	3.8	chr8	27837353	27837429	(117301207)	+	A-rich	Low_complexity	1	79	(0)	3835077
189	28.6	2.8	1.0	chr8	28012846	28013449	(117125187)	+	GA-rich	Low_complexity	1	621	(0)	3835387
251	25.4	2.9	0.0	chr8	28113199	28113265	(117025371)	C	L1M5	LINE/L1	(552)	5571	5503	3835574
2098	12.2	0.7	0.0	chr8	28324582	28324875	(116813761)	+	AluSq	SINE/Alu	1	296	(17)	3835926
2325	11.5	0.0	1.0	chr8	30141354	30141666	(114996970)	+	AluSx1	SINE/Alu	2	311	(1)	3839135
615	21.4	6.0	0.8	chr8	30166814	30166939	(114971697)	+	FLAM_C	SINE/Alu	1	133	(10)	3839186
83	16.9	2.2	5.6	chr8	30166950	30167176	(114971460)	+	GA-rich	Low_complexity	1	232	(0)	3839187
205	31.3	12.8	4.1	chr8	30656114	30656283	(114482353)	+	MIRc	SINE/MIR	69	261	(7)	3840118
890	16.1	1.2	2.4	chr8	30728259	30728426	(114410210)	C	FRAM	SINE/Alu	(10)	166	1	3840309
366	15.6	8.5	2.6	chr8	30866200	30866276	(114272360)	+	AluJb	SINE/Alu	219	300	(12)	3840589
48	6.4	10.5	3.6	chr8	30866280	30866403	(114272233)	+	G-rich	Low_complexity	1	137	(0)	3840590
1145	24.6	12.8	3.4	chr8	31035087	31035654	(114102982)	C	L2a	LINE/L2	(1)	3425	2799	3840917
8122	15.3	4.5	1.9	chr8	31037876	31039921	(114098715)	C	L1MB4	LINE/L1	(308)	5872	3776	3840918
5136	20.4	8.1	1.7	chr8	31052799	31054164	(114084472)	+	Charlie17	DNA/hAT-Charlie	1151	2612	(304)	3840944
13	26.8	0.0	6.2	chr8	31054236	31054300	(114084336)	+	A-rich	Low_complexity	1	65	(0)	3840945
808	17.5	0.0	0.8	chr8	31054398	31054523	(114084113)	C	AluJr	SINE/Alu	(187)	125	1	3840946
154	10.5	3.4	1.4	chr8	33587476	33587744	(111550892)	+	(CTTT)n	Simple_repeat	1	278	(0)	3844836
2071	13.2	0.0	2.6	chr8	33587746	33588055	(111550581)	C	AluSz6	SINE/Alu	(10)	302	1	3844837
101	22.7	3.1	2.7	chr8	37231473	37231763	(107906873)	+	GA-rich	Low_complexity	1	300	(0)	3850024
2677	22.1	1.6	3.0	chr8	37336735	37337294	(107801342)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	3850159
30	0.0	3.1	0.0	chr8	37562480	37562511	(107576125)	+	(TTTCT)n	Simple_repeat	1	33	(0)	3850521
1666	17.1	1.0	2.3	chr8	37679940	37680238	(107458398)	+	AluJr	SINE/Alu	1	295	(17)	3850772
55	22.2	0.0	0.0	chr8	37680241	37680356	(107458280)	+	GA-rich	Low_complexity	1	116	(0)	3850773
14	17.4	11.9	0.0	chr8	37693542	37693600	(107445036)	+	(CTTCT)n	Simple_repeat	1	66	(0)	3850800
14	35.1	2.1	2.1	chr8	37693627	37693720	(107444916)	+	(CCTCTCC)n	Simple_repeat	1	96	(0)	3850801
713	31.1	1.4	1.9	chr8	37785843	37786058	(107352578)	+	MIR	SINE/MIR	29	243	(19)	3850963
734	26.9	2.2	8.8	chr8	37892133	37892417	(107246219)	+	L2a	LINE/L2	2563	2834	(585)	3851155
157	26.1	2.7	0.7	chr8	37997386	37997826	(107140810)	+	(CT)n	Simple_repeat	1	453	(0)	3851396
3406	9.6	3.0	5.8	chr8	38015456	38015718	(107122918)	C	MER4A	LTR/ERV1	(259)	405	128	3851441
1806	13.7	3.9	0.0	chr8	38015719	38015988	(107122648)	C	AluSq2	SINE/Alu	(15)	298	18	3851444
24515	6.6	1.8	1.1	chr8	38087765	38090706	(107047930)	C	HERV1_I-int	LTR/ERV1	(5205)	3596	667	3851616
13	13.1	2.7	5.3	chr8	38381285	38381321	(106757315)	+	(TTCC)n	Simple_repeat	1	38	(0)	3852192
2431	7.7	0.0	0.0	chr8	38985159	38985458	(106153178)	C	AluSc	SINE/Alu	(9)	300	1	3853332
142	2.1	0.7	1.3	chr8	41367186	41367334	(103771302)	+	(GAAAG)n	Simple_repeat	1	150	(0)	3856860
47	12.6	2.6	5.8	chr8	41588444	41588561	(103550075)	+	(TTCTT)n	Simple_repeat	1	114	(0)	3857303
325	28.9	1.1	3.2	chr8	41588633	41588725	(103549911)	+	L2b	LINE/L2	3284	3374	(1)	3857304
5152	25.9	11.2	2.1	chr8	41960765	41961476	(103177160)	+	L2a	LINE/L2	1046	1815	(1604)	3857888
1854	17.0	0.0	1.6	chr8	42269033	42269349	(102869287)	+	AluJr	SINE/Alu	1	312	(0)	3858483
69	25.7	6.2	2.9	chr8	42269350	42269677	(102868959)	+	A-rich	Low_complexity	1	338	(0)	3858484
198	22.5	2.9	3.3	chr8	42380357	42380804	(102757832)	+	A-rich	Low_complexity	1	443	(0)	3858687
1153	9.5	5.6	0.0	chr8	42407229	42407396	(102731240)	C	LTR9D	LTR/ERV1	(0)	645	468	3858730
365	29.4	0.9	0.0	chr8	42538571	42538679	(102599957)	C	L2a	LINE/L2	(6)	3420	3311	3858978
2592	13.0	5.9	2.5	chr8	42788137	42788791	(102349845)	+	L1PB4	LINE/L1	5051	5717	(439)	3859487
1722	12.6	0.4	2.2	chr8	42788792	42789066	(102349570)	+	L1PB4	LINE/L1	5874	6143	(13)	3859487
2421	5.7	1.3	0.3	chr8	43057677	43058002	(102080634)	+	AluSq2	SINE/Alu	1	313	(0)	3860032
432	29.0	11.8	3.5	chr8	43133960	43134245	(102004391)	+	L2c	LINE/L2	2934	3246	(141)	3860164
1145	16.9	0.9	0.6	chr8	43829264	43864897	(101273739)	+	ALR/Alpha	Satellite/centr	1	35737	(0)	3860672
55	22.0	1.7	5.1	chr8	47393614	47393673	(97744963)	+	(TCTTT)n	Simple_repeat	1	59	(0)	3861884
72	0.0	1.5	0.0	chr8	47393674	47393741	(97744895)	+	(TTTCC)n	Simple_repeat	1	69	(0)	3861885
55	22.0	1.7	5.1	chr8	47393742	47393855	(97744781)	+	(TCTTT)n	Simple_repeat	5	114	(0)	3861886
2027	13.9	0.7	1.0	chr8	47744594	47744894	(97393742)	+	AluSz	SINE/Alu	1	300	(12)	3862340
4059	22.0	9.7	7.5	chr8	47744895	47745251	(97393385)	+	L1M4	LINE/L1	1502	1709	(5911)	3862339
3457	18.4	1.5	1.8	chr8	52769732	52770384	(92368252)	C	L1MC3	LINE/L1	(6)	7779	7129	3868636
91	14.5	2.2	2.1	chr8	60759369	60759552	(84379084)	+	(CTCTCC)n	Simple_repeat	1	188	(0)	3879703
3039	15.2	1.5	11.2	chr8	63284797	63285011	(81853625)	C	L1MA4A	LINE/L1	(319)	5984	5780	3883038
166	3.4	0.0	2.1	chr8	63285012	63285200	(81853436)	+	(TCCTT)n	Simple_repeat	1	189	(0)	3883040
2128	12.5	0.0	2.6	chr8	64540468	64540771	(80597865)	+	AluSx	SINE/Alu	2	297	(15)	3884608
222	21.4	2.2	3.8	chr8	64540772	64541141	(80597495)	+	A-rich	Low_complexity	251	610	(0)	3884609
11	15.8	6.5	4.1	chr8	65830044	65830089	(79308547)	+	(ACTTCC)n	Simple_repeat	1	49	(0)	3886478
11	23.8	10.1	0.0	chr8	65842755	65842823	(79295813)	+	(AGAATG)n	Simple_repeat	1	76	(0)	3886501
543	0.0	0.0	21.5	chr8	66113367	66113459	(79025177)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886877
254	22.1	12.4	2.3	chr8	66123923	66124052	(79014584)	C	MIR3	SINE/MIR	(57)	151	7	3886897
219	36.3	0.8	0.8	chr8	66124096	66124220	(79014416)	+	L2c	LINE/L2	2619	2743	(676)	3886898
21	17.0	3.6	1.8	chr8	66535213	66535267	(78603369)	+	(ATTTC)n	Simple_repeat	1	57	(0)	3887564
14	15.6	5.6	0.0	chr8	66667191	66667226	(78471410)	+	(CACT)n	Simple_repeat	1	38	(0)	3887826
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
207	29.9	3.6	3.2	chr8	68589345	68590290	(76548346)	+	GA-rich	Low_complexity	1	980	(0)	3890902
1658	15.2	3.2	3.9	chr8	69772259	69772541	(75366095)	+	AluJr	SINE/Alu	21	301	(11)	3892547
14	5.0	0.0	0.0	chr8	69772542	69772562	(75366074)	+	(GGAG)n	Simple_repeat	1	21	(0)	3892548
108	1.0	0.0	0.0	chr8	69772564	69772662	(75365974)	+	(GAAAG)n	Simple_repeat	1	99	(0)	3892549
27	28.0	1.3	0.0	chr8	70245503	70245579	(74893057)	+	(TC)n	Simple_repeat	1	78	(0)	3893490
16	22.2	3.9	1.9	chr8	70245579	70245630	(74893006)	+	(CACATA)n	Simple_repeat	1	54	(0)	3893491
449	28.4	13.4	3.5	chr8	73281819	73282106	(71856530)	+	MLT1J1	LTR/ERVL-MaLR	124	444	(0)	3897744
246	31.0	10.5	5.4	chr8	73713377	73713668	(71424968)	C	L2c	LINE/L2	(84)	3342	2993	3898376
23	14.4	2.5	0.0	chr8	74351522	74351561	(70787075)	+	(TC)n	Simple_repeat	1	41	(0)	3899557
2130	12.0	3.9	1.7	chr8	75104771	75105071	(70033565)	C	AluSg	SINE/Alu	(1)	309	2	3900533
216	1.0	0.9	0.9	chr8	75105072	75105282	(70033354)	+	(CCTTT)n	Simple_repeat	1	213	(0)	3900534
12	17.7	3.1	0.0	chr8	76677976	76678007	(68460629)	+	G-rich	Low_complexity	1	33	(0)	3902540
22	15.2	0.0	2.5	chr8	79684677	79684716	(65453920)	+	GA-rich	Low_complexity	1	40	(0)	3906332
569	16.9	2.9	5.6	chr8	80091728	80091871	(65046765)	C	MER5A1	DNA/hAT-Charlie	(0)	166	27	3906999
216	21.3	10.3	0.0	chr8	80168876	80168936	(64969700)	C	L2c	LINE/L2	(7)	3380	3313	3907143
16	0.0	0.0	0.0	chr8	80297059	80297078	(64841558)	+	(CAC)n	Simple_repeat	1	20	(0)	3907463
647	20.4	0.0	0.9	chr8	80796714	80796821	(64341815)	+	AluJb	SINE/Alu	1	107	(205)	3908394
61	26.5	3.8	2.3	chr8	80796822	80797015	(64341621)	+	A-rich	Low_complexity	1	196	(0)	3908395
3748	26.3	7.9	9.1	chr8	80797017	80798258	(64340378)	C	MSTC-int	LTR/ERVL-MaLR	(281)	1454	255	3908396
35	7.8	0.0	1.7	chr8	86326055	86326107	(58812529)	+	(TCCTC)n	Simple_repeat	1	52	(0)	3915881
87	0.0	2.1	2.1	chr8	86326108	86326200	(58812436)	+	(TTCCT)n	Simple_repeat	1	95	(0)	3915882
1588	14.4	4.2	4.2	chr8	86326228	86326490	(58812146)	C	AluJo	SINE/Alu	(49)	263	1	3915883
9239	22.0	3.1	2.5	chr8	93062023	93065342	(52073294)	+	L1MA9	LINE/L1	2335	5655	(1193)	3924647
17	24.9	0.6	9.1	chr8	96493395	96493499	(48645137)	+	A-rich	Low_complexity	1	96	(0)	3930397
13	28.6	5.3	1.3	chr8	96493402	96493476	(48645160)	+	GA-rich	Low_complexity	1	79	(0)	3930398
683	24.5	3.4	1.8	chr8	97639631	97639849	(47498787)	C	L1ME3C	LINE/L1	(49)	6193	5969	3932065
357	29.5	9.8	8.4	chr8	100182303	100182694	(44955942)	+	MLT1K	LTR/ERVL-MaLR	198	595	(0)	3936322
38	21.9	3.5	4.8	chr8	100445897	100446038	(44692598)	+	GA-rich	Low_complexity	1	147	(0)	3936810
4965	18.4	3.3	2.3	chr8	100446111	100447731	(44690905)	C	L1MB4	LINE/L1	(0)	6781	4529	3936811
357	30.6	18.4	2.3	chr8	100724515	100724859	(44413777)	+	L2b	LINE/L2	1803	2215	(1204)	3937332
78	24.9	5.6	1.4	chr8	101800826	101801095	(43337541)	+	GA-rich	Low_complexity	1	285	(0)	3939350
18	16.9	0.0	0.0	chr8	102239873	102239905	(42898731)	+	(GT)n	Simple_repeat	1	33	(0)	3940007
12	25.1	4.3	0.0	chr8	102239906	102239918	(42898718)	+	(AGTG)n	Simple_repeat	2	49	(0)	3940008
1056	28.9	5.3	3.5	chr8	102774334	102774792	(42363844)	+	LTR33	LTR/ERVL	1	468	(47)	3941080
43	0.0	0.0	0.0	chr8	103127178	103127217	(42011419)	+	(AAAAC)n	Simple_repeat	1	40	(0)	3941797
4423	25.2	12.6	10.3	chr8	103127345	103128002	(42010634)	C	HAL1	LINE/L1	(0)	2507	1833	3941798
22	8.7	2.7	0.0	chr8	105596350	105596386	(39542250)	+	(AGAA)n	Simple_repeat	1	38	(0)	3945371
16	23.5	0.0	0.0	chr8	106273241	106273272	(38865364)	+	A-rich	Low_complexity	1	32	(0)	3946271
1052	18.1	5.1	0.0	chr8	106273391	106273594	(38865042)	+	MER20	DNA/hAT-Charlie	1	215	(4)	3946272
352	11.8	3.8	0.0	chr8	106765216	106765266	(38373370)	+	AluJr	SINE/Alu	121	173	(139)	3947042
1355	16.8	2.2	3.5	chr8	108010931	108011162	(37127474)	+	AluSx3	SINE/Alu	83	311	(0)	3948741
61	4.7	4.4	0.0	chr8	108011164	108011253	(37127383)	+	(GAAAAG)n	Simple_repeat	1	94	(0)	3948742
439	31.2	5.5	4.6	chr8	110926506	110926790	(34211846)	+	L1MC4	LINE/L1	942	1229	(4986)	3952850
72	23.5	2.6	3.4	chr8	110926795	110927024	(34211612)	+	GA-rich	Low_complexity	1	236	(0)	3952851
15	18.2	0.0	4.8	chr8	115663376	115663417	(29475219)	+	A-rich	Low_complexity	1	42	(0)	3958960
22	0.0	0.0	0.0	chr8	115668342	115668365	(29470271)	+	(T)n	Simple_repeat	1	24	(0)	3958964
121	2.5	0.8	0.8	chr8	117973785	117973911	(27164725)	+	(GAAAG)n	Simple_repeat	1	128	(0)	3962471
77	14.5	4.7	6.2	chr8	123423194	123423425	(21715211)	+	(CTTC)n	Simple_repeat	1	243	(0)	3971834
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
2106	18.6	8.4	0.0	chr8	129928703	129929214	(15209422)	+	L1MB7	LINE/L1	5384	5942	(242)	3983966
35	23.4	1.2	0.0	chr8	129929229	129929309	(15209327)	+	GA-rich	Low_complexity	1	82	(0)	3983969
32	15.5	5.4	3.1	chr8	129929310	129929320	(15209316)	+	G-rich	Low_complexity	1	97	(0)	3983970
418	29.8	7.3	0.5	chr8	129929330	129929545	(15209091)	+	L1MB7	LINE/L1	5953	6184	(0)	3983966
1886	15.6	0.3	5.3	chr8	130215773	130215946	(14922690)	+	AluJb	SINE/Alu	132	305	(7)	3984585
48	17.2	6.6	2.1	chr8	130215958	130216093	(14922543)	+	A-rich	Low_complexity	1	145	(0)	3984587
380	19.4	0.0	0.0	chr8	144025270	144025331	(1113305)	C	AluJb	SINE/Alu	(235)	77	16	4006987
14	21.1	2.6	0.0	chr9	967940	967978	(137426739)	+	(CTCT)n	Simple_repeat	1	40	(0)	4010074
621	18.4	2.9	2.9	chr9	5790857	5790996	(132603721)	+	L1ME2	LINE/L1	6024	6163	(1)	4017009
1740	17.9	4.5	3.7	chr9	5791133	5791557	(132603160)	C	MLT2D	LTR/ERVL	(0)	556	1	4017010
122	0.0	0.9	0.9	chr9	7332903	7333016	(131061701)	+	(TCCTT)n	Simple_repeat	1	115	(0)	4019570
1105	14.3	2.2	2.8	chr9	8823476	8823657	(129571060)	+	AluJb	SINE/Alu	108	288	(24)	4021621
34	5.5	5.1	1.6	chr9	8823658	8823723	(129570994)	+	(GGAAAG)n	Simple_repeat	1	68	(0)	4021622
3957	12.0	0.4	0.0	chr9	8823730	8824281	(129570436)	C	MER41A	LTR/ERV1	(0)	554	1	4021623
18	9.1	0.0	7.3	chr9	9924565	9924605	(128470112)	+	(CTTTC)n	Simple_repeat	1	41	(0)	4023038
146	20.2	3.8	3.0	chr9	13902257	13902674	(124492043)	+	GA-rich	Low_complexity	1	434	(0)	4028233
24	27.2	3.7	3.5	chr9	14249659	14249767	(124144950)	+	GA-rich	Low_complexity	1	113	(0)	4028717
105	20.5	0.8	2.1	chr9	16539519	16539755	(121854962)	+	GA-rich	Low_complexity	1	239	(0)	4032060
128	9.1	2.9	0.9	chr9	16539677	16539883	(121854834)	+	(AGGAA)n	Simple_repeat	1	213	(0)	4032061
268	17.4	11.3	0.0	chr9	16539931	16540016	(121854701)	C	Tigger20a	DNA/TcMar-Tigger	(173)	800	704	4032062
965	9.8	0.0	0.0	chr9	16796474	16796595	(121598122)	+	AluYc	SINE/Alu	172	293	(6)	4032388
41	15.0	3.0	3.9	chr9	16796596	16796695	(121598022)	+	A-rich	Low_complexity	1	103	(0)	4032389
2271	11.5	0.0	0.0	chr9	19427658	19427961	(118966756)	C	AluY	SINE/Alu	(3)	308	5	4036309
94	0.0	0.0	6.7	chr9	19427962	19428080	(118966637)	+	(TTCCT)n	Simple_repeat	1	119	(0)	4036310
29	22.8	2.8	4.5	chr9	19428081	19428129	(118966588)	+	(TTTC)n	Simple_repeat	1	49	(0)	4036311
26	0.0	0.0	0.0	chr9	21069934	21069961	(117324756)	+	(A)n	Simple_repeat	1	28	(0)	4038811
13	18.8	4.5	2.2	chr9	21070063	21070106	(117324611)	+	A-rich	Low_complexity	1	46	(0)	4038812
21	0.0	0.0	0.0	chr9	21318622	21318644	(117076073)	+	(A)n	Simple_repeat	1	23	(0)	4039077
184	33.3	10.0	1.2	chr9	21318665	21318746	(117075971)	+	L2	LINE/L2	1441	1530	(1889)	4039078
53	27.2	2.2	2.1	chr9	28409875	28410057	(109984660)	+	G-rich	Low_complexity	1	187	(0)	4048536
59	31.2	3.0	4.6	chr9	28410058	28410208	(109984509)	+	A-rich	Low_complexity	4	347	(0)	4048537
2327	11.5	0.0	0.0	chr9	34144963	34145266	(104249451)	C	AluSx1	SINE/Alu	(8)	304	1	4056823
524	23.7	16.0	10.3	chr9	34145267	34145594	(104249123)	+	MLT1J	LTR/ERVL-MaLR	70	436	(76)	4056822
1147	30.4	9.0	5.7	chr9	34768771	34768897	(103625820)	+	L1MC5a	LINE/L1	4157	4280	(1866)	4057922
30	3.5	0.0	0.0	chr9	34768898	34768927	(103625790)	+	(GA)n	Simple_repeat	1	30	(0)	4057923
308	20.7	3.9	13.3	chr9	35080271	35080443	(103314274)	+	L1M4	LINE/L1	4897	5052	(1094)	4058321
623	22.6	6.3	17.3	chr9	35262115	35262190	(103132527)	C	L1MC4	LINE/L1	(360)	7682	7614	4058624
42	15.1	0.0	6.7	chr9	35262197	35262300	(103132417)	+	(TTCTT)n	Simple_repeat	1	104	(0)	4058626
2104	14.7	0.3	1.0	chr9	35262306	35262617	(103132100)	C	AluSx3	SINE/Alu	(1)	310	1	4058627
1088	22.9	12.9	3.2	chr9	35775185	35775554	(102619163)	C	LTR33A_	LTR/ERVL	(8)	523	113	4059406
10325	10.1	3.4	3.1	chr9	35898202	35899677	(102495040)	C	Tigger1	DNA/TcMar-Tigger	(863)	1555	66	4059593
352	32.7	0.5	6.2	chr9	35953103	35953327	(102441390)	C	L1M5	LINE/L1	(1824)	4322	4111	4059676
101	16.4	3.6	4.9	chr9	36291048	36291321	(102103396)	+	(TTCT)n	Simple_repeat	1	284	(0)	4060342
41	30.9	1.2	2.5	chr9	36996823	36996983	(101397734)	+	GA-rich	Low_complexity	1	163	(0)	4061859
512	26.7	13.5	3.8	chr9	37471357	37471648	(100923069)	+	MER34A	LTR/ERV1	213	537	(34)	4062732
188	26.4	15.5	1.8	chr9	69175135	69175300	(69219417)	+	LFSINE_Vert	SINE/tRNA	6	198	(261)	4081174
185	36.8	5.0	1.7	chr9	70406384	70406499	(67988218)	+	L3b	LINE/CR1	5112	5231	(1)	4083091
261	27.5	15.8	1.3	chr9	70416834	70416984	(67977733)	C	L2a	LINE/L2	(0)	3426	3250	4083108
1160	22.5	1.1	1.8	chr9	82308848	82309128	(56085589)	+	UCON78	DNA	5	283	(160)	4101325
23	33.0	1.9	1.9	chr9	83030846	83030950	(55363767)	+	(TTTC)n	Simple_repeat	1	107	(0)	4102287
1689	13.7	7.4	0.7	chr9	83662805	83663082	(54731635)	+	AluJb	SINE/Alu	14	311	(1)	4103270
45	26.6	2.7	2.6	chr9	83663083	83663229	(54731488)	+	A-rich	Low_complexity	1	147	(0)	4103271
221	32.5	0.0	1.1	chr9	83981378	83981464	(54413253)	C	L2a	LINE/L2	(42)	3384	3299	4103853
349	29.4	7.4	11.8	chr9	85944557	85944911	(52449806)	C	Charlie16a	DNA/hAT-Charlie	(2)	340	3	4107044
16	0.0	0.0	0.0	chr9	86947767	86947783	(51446934)	+	(T)n	Simple_repeat	1	17	(0)	4108707
951	31.9	1.0	0.0	chr9	87039910	87040187	(51354530)	C	LTR16C	LTR/ERVL	(0)	489	212	4108839
1089	33.0	9.5	4.8	chr9	91953968	91955175	(46439542)	+	L2c	LINE/L2	2011	3285	(90)	4115971
4763	21.2	6.2	4.5	chr9	94007402	94009148	(44385569)	+	L1MDa	LINE/L1	18	2111	(4522)	4118891
2218	9.7	4.3	0.0	chr9	94009149	94009436	(44385281)	C	AluSz	SINE/Alu	(11)	301	1	4118892
24	16.1	1.7	3.3	chr9	95048431	95048489	(43346228)	+	G-rich	Low_complexity	1	60	(0)	4120664
1820	26.9	9.8	6.7	chr9	95211501	95212938	(43181779)	+	L1ME1	LINE/L1	640	2124	(4278)	4120847
23	3.7	0.0	0.0	chr9	95507906	95507933	(42886784)	+	(AC)n	Simple_repeat	1	28	(0)	4121303
28	24.6	0.0	0.0	chr9	95508033	95508095	(42886622)	+	(GT)n	Simple_repeat	1	63	(0)	4121304
17	3.5	3.2	3.1	chr9	95509243	95509273	(42885444)	+	(GAGGG)n	Simple_repeat	1	32	(0)	4121307
2528	6.8	0.0	0.3	chr9	97802871	97803180	(40591537)	+	AluSx3	SINE/Alu	1	309	(2)	4125168
24	28.0	2.5	5.6	chr9	97803181	97803291	(40591426)	+	A-rich	Low_complexity	10	118	(0)	4125169
50	23.0	3.8	5.9	chr9	97803191	97803463	(40591254)	+	GA-rich	Low_complexity	1	267	(0)	4125170
409	26.1	4.3	6.9	chr9	101483999	101484187	(36910530)	+	L1ME3G	LINE/L1	289	472	(452)	4131774
33	23.9	5.3	0.8	chr9	101484205	101484317	(36910400)	+	GA-rich	Low_complexity	1	119	(0)	4131775
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
29	24.3	5.2	3.5	chr9	106860928	106861063	(31533654)	+	(CTCCTTT)n	Simple_repeat	1	143	(0)	4139690
77	12.9	3.7	0.0	chr9	106863000	106863135	(31531582)	+	GA-rich	Low_complexity	1	141	(0)	4139694
26	11.4	4.9	1.6	chr9	107313851	107313913	(31080804)	+	(TCCTCTC)n	Simple_repeat	1	65	(0)	4140411
31	2.3	6.8	0.0	chr9	107313914	107313957	(31080760)	+	(TCCT)n	Simple_repeat	1	47	(0)	4140412
26	11.4	4.9	1.6	chr9	107313958	107313970	(31080747)	+	(TCCTCTC)n	Simple_repeat	2	13	(0)	4140413
54	30.6	4.7	0.4	chr9	107638282	107638530	(30756187)	+	(CTCT)n	Simple_repeat	1	259	(0)	4141236
16	29.8	1.1	5.4	chr9	107638454	107638544	(30756173)	+	(CTTT)n	Simple_repeat	1	92	(0)	4141237
2356	8.4	1.6	0.0	chr9	107826447	107826469	(30568248)	C	AluY	SINE/Alu	(7)	304	282	4141676
82	0.0	0.0	0.0	chr9	107826470	107826541	(30568176)	+	(CTTTCC)n	Simple_repeat	1	72	(0)	4141677
2356	8.4	1.6	0.0	chr9	107826542	107826816	(30567901)	C	AluY	SINE/Alu	(36)	275	1	4141676
76	24.4	3.4	4.0	chr9	112130387	112130653	(26264064)	+	G-rich	Low_complexity	1	276	(0)	4149212
345	30.5	5.5	7.4	chr9	112130699	112130742	(26263975)	C	MIRb	SINE/MIR	(55)	213	170	4149213
396	24.1	12.5	0.0	chr9	112249397	112249529	(26145188)	C	L2	LINE/L2	(1215)	2204	2053	4149456
1160	26.7	14.7	2.7	chr9	112310501	112311194	(26083523)	C	L2a	LINE/L2	(0)	3426	2656	4149556
100	15.7	0.9	3.7	chr9	113737972	113737985	(24656732)	+	(TCCT)n	Simple_repeat	1	14	(0)	4152292
56	9.7	2.2	0.0	chr9	113737986	113738076	(24656641)	+	(TC)n	Simple_repeat	1	93	(0)	4152293
100	15.7	0.9	3.7	chr9	113738077	113738276	(24656441)	+	(TCCT)n	Simple_repeat	3	196	(0)	4152294
275	26.0	2.9	0.0	chr9	114156640	114156739	(24237978)	C	MIR3	SINE/MIR	(15)	193	91	4153077
60	19.4	1.9	3.8	chr9	114777093	114777249	(23617468)	+	(TTTC)n	Simple_repeat	1	160	(0)	4154429
542	34.3	0.0	0.0	chr9	114777296	114777467	(23617250)	+	MIRb	SINE/MIR	26	197	(71)	4154430
18	20.4	2.8	5.4	chr9	121897858	121897911	(16496806)	+	(TTCC)n	Simple_repeat	1	52	(0)	4167894
2094	12.6	2.0	0.3	chr9	121897912	121898212	(16496505)	C	AluSx1	SINE/Alu	(5)	307	2	4167895
37	23.6	1.1	0.0	chr9	123064027	123064120	(15330597)	+	(CTCT)n	Simple_repeat	1	95	(0)	4170044
23	7.0	8.7	0.0	chr9	123305525	123305580	(15089137)	+	(CCTTTC)n	Simple_repeat	1	60	(0)	4170455
606	13.5	0.0	0.0	chr9	123305581	123305669	(15089048)	C	AluSx	SINE/Alu	(6)	306	218	4170456
16	17.7	0.0	2.5	chr9	124003303	124003342	(14391375)	+	(TCTTTT)n	Simple_repeat	1	40	(0)	4171694
1802	18.3	2.4	0.0	chr9	124682929	124683218	(13711499)	+	AluJr	SINE/Alu	6	302	(10)	4173036
37	6.1	0.0	0.0	chr9	124683221	124683272	(13711445)	+	(AAAGGA)n	Simple_repeat	1	52	(0)	4173037
238	26.5	8.1	0.0	chr9	124683277	124683344	(13711373)	C	MIRc	SINE/MIR	(193)	75	2	4173038
655	21.6	8.4	0.8	chr9	124828570	124828767	(13565950)	+	L1MB7	LINE/L1	5822	6039	(145)	4173329
212	20.3	3.2	2.9	chr9	124828768	124829327	(13565390)	+	(CTTT)n	Simple_repeat	1	578	(0)	4173330
191	32.0	12.2	3.0	chr9	126332059	126332258	(12062459)	+	L2b	LINE/L2	2973	3193	(182)	4176275
280	27.4	15.2	2.6	chr9	126704686	126704887	(11689830)	C	L2c	LINE/L2	(212)	3175	2941	4176868
1373	8.7	14.4	0.0	chr9	127736338	127736533	(10658184)	+	AluSx1	SINE/Alu	1	229	(83)	4178892
115	16.1	3.4	2.5	chr9	127736555	127736761	(10657956)	+	A-rich	Low_complexity	1	211	(0)	4178893
2612	6.8	0.0	0.0	chr9	127736762	127737069	(10657648)	+	AluSc	SINE/Alu	1	308	(1)	4178894
115	16.1	3.4	2.5	chr9	127737070	127737126	(10657591)	+	A-rich	Low_complexity	212	266	(0)	4178895
253	31.9	13.8	1.8	chr9	127737156	127737321	(10657396)	+	MIR3	SINE/MIR	19	207	(1)	4178896
422	26.5	16.0	1.7	chr9	127931274	127931738	(10462979)	+	L2b	LINE/L2	2785	3332	(43)	4179361
200	27.2	11.5	2.1	chr9	127955629	127955722	(10438995)	C	L2c	LINE/L2	(245)	3142	3039	4179404
922	9.6	2.3	0.0	chr9	128285053	128285177	(10109540)	+	AluSc	SINE/Alu	167	294	(15)	4180142
65	15.2	2.1	4.7	chr9	128285182	128285324	(10109393)	+	GA-rich	Low_complexity	1	139	(0)	4180143
762	25.8	14.5	0.9	chr9	129160446	129160888	(9233829)	C	L2a	LINE/L2	(25)	3401	2870	4182202
32	34.0	1.5	2.2	chr9	129160905	129161040	(9233677)	+	(TCCC)n	Simple_repeat	1	138	(0)	4182203
2222	14.2	0.3	0.0	chr9	129161042	129161352	(9233365)	C	AluJb	SINE/Alu	(0)	312	1	4182204
2366	8.7	0.0	1.0	chr9	129931931	129932242	(8462475)	+	AluSc	SINE/Alu	1	309	(0)	4183927
60	16.2	3.6	4.1	chr9	129932243	129932328	(8462389)	+	A-rich	Low_complexity	79	164	(0)	4183928
69	19.8	2.2	3.2	chr9	130183638	130183799	(8210918)	+	(TCTT)n	Simple_repeat	1	162	(0)	4184499
2505	7.8	0.0	0.3	chr9	130183800	130184108	(8210609)	C	AluY	SINE/Alu	(2)	309	2	4184500
2297	13.1	0.0	0.0	chr9	130711264	130711576	(7683141)	+	AluSq2	SINE/Alu	1	313	(0)	4185635
41	18.0	3.9	1.9	chr9	130711578	130711680	(7683037)	+	GA-rich	Low_complexity	1	107	(0)	4185636
1368	25.4	9.5	2.5	chr9	130720079	130720926	(7673791)	C	L2a	LINE/L2	(5)	3421	2508	4185655
380	26.4	0.0	0.0	chr9	131396063	131396153	(6998564)	+	MIRc	SINE/MIR	114	204	(64)	4187016
35	13.7	4.9	4.7	chr9	131396226	131396315	(6998402)	+	(TTCC)n	Simple_repeat	1	91	(0)	4187017
2403	10.7	0.7	0.0	chr9	131396316	131396625	(6998092)	C	AluSx	SINE/Alu	(0)	312	1	4187018
14	5.0	0.0	0.0	chr9	131704808	131704828	(6689889)	+	(TGCC)n	Simple_repeat	1	21	(0)	4187514
15	21.4	2.3	0.0	chr9	131973139	131973181	(6421536)	+	(TTTTTC)n	Simple_repeat	1	44	(0)	4188015
427	27.8	10.4	7.3	chr9	131973200	131973432	(6421285)	+	MLT1L	LTR/ERVL-MaLR	34	274	(336)	4188016
2889	15.9	3.5	0.8	chr9	132000208	132000739	(6393978)	+	L1ME1	LINE/L1	5344	5890	(289)	4188062
26	27.9	6.1	0.0	chr9	132873494	132873608	(5521109)	+	(TTCACT)n	Simple_repeat	1	122	(0)	4189648
88	21.7	3.2	2.7	chr9	132978100	132978350	(5416367)	+	GA-rich	Low_complexity	1	259	(0)	4189844
14	19.1	3.9	3.7	chr9	132978389	132978440	(5416277)	+	(TTTAATAA)n	Simple_repeat	1	54	(0)	4189845
12	4.9	0.0	4.3	chr9	133657376	133657398	(4737319)	+	(GCCA)n	Simple_repeat	1	23	(0)	4190906
92	3.9	6.0	0.0	chr9	133657399	133657531	(4737186)	+	(AG)n	Simple_repeat	1	141	(0)	4190907
102	28.2	2.0	1.7	chr9	134189348	134189691	(4205026)	+	GA-rich	Low_complexity	1	351	(0)	4191695
59	15.5	0.0	0.0	chr9	134253849	134253950	(4140767)	+	GA-rich	Low_complexity	1	102	(0)	4191786
398	32.7	15.4	2.6	chr9	134253951	134254396	(4140321)	+	HAL1	LINE/L1	880	1277	(1230)	4191787
398	22.3	0.9	0.0	chr9	135726650	135727496	(2667221)	+	(TCTC)n	Simple_repeat	1	855	(0)	4193569
451	31.8	8.1	4.5	chr9	135893200	135893471	(2501246)	+	L1MEg	LINE/L1	951	1235	(4980)	4193739
748	23.9	4.0	2.4	chr9	135893489	135893815	(2500902)	+	L1MEg	LINE/L1	1165	1668	(911)	4193738
8105	7.0	1.0	0.1	chr9	136766299	136767296	(1627421)	+	LTR13	LTR/ERVK	1	1007	(0)	4194774
817	23.0	0.0	1.8	chr9	137598892	137599056	(795661)	C	AluJb	SINE/Alu	(17)	295	134	4195846
313	27.1	11.4	2.8	chr9	137599063	137599206	(795511)	C	MLT1H2-int	LTR/ERVL-MaLR	(1056)	353	196	4195847
329	24.8	8.9	5.0	chr9	137599232	137599311	(795406)	C	MLT1H2-int	LTR/ERVL-MaLR	(1285)	124	35	4195847
3070	16.9	11.1	2.6	chr9	137947441	137947975	(446742)	C	L1MDa	LINE/L1	(4458)	2175	1597	4196367
506	22.4	3.0	0.0	chrX	3636855	3636952	(152403943)	+	AluSx3	SINE/Alu	208	308	(3)	4365242
66	19.1	3.7	5.8	chrX	3636954	3637172	(152403723)	+	A-rich	Low_complexity	1	214	(0)	4365243
304	32.6	12.2	3.3	chrX	13695110	13695385	(142345510)	C	HAL1	LINE/L1	(2199)	308	5	4381616
896	28.5	10.2	4.6	chrX	15456954	15457413	(140583482)	C	LTR16C	LTR/ERVL	(0)	489	1	4384402
387	31.6	2.1	0.5	chrX	15812848	15813035	(140227860)	C	L4_C_Mam	LINE/RTE-X	(277)	4861	4671	4385018
419	14.7	24.4	1.0	chrX	16892676	16892884	(139148011)	C	LTR50	LTR/ERVL	(0)	795	498	4386927
695	23.0	14.3	0.5	chrX	16892892	16893101	(139147794)	C	LTR50	LTR/ERVL	(551)	244	1	4386927
1051	28.6	9.1	5.3	chrX	17812280	17812828	(138228067)	C	Tigger16a	DNA/TcMar-Tigger	(29)	928	357	4388415
961	27.1	3.9	6.8	chrX	18387960	18388383	(137652512)	+	MLT1K	LTR/ERVL-MaLR	185	595	(0)	4389409
21	0.0	0.0	0.0	chrX	20361876	20361898	(135678997)	+	(A)n	Simple_repeat	1	23	(0)	4393017
150	11.3	1.9	2.9	chrX	21922980	21923250	(134117645)	+	A-rich	Low_complexity	1	276	(0)	4395170
12729	15.5	5.9	3.6	chrX	21925832	21928056	(134112839)	+	Charlie5	DNA/hAT-Charlie	217	2534	(90)	4395179
1790	23.6	9.2	0.6	chrX	23804147	23804641	(132236254)	+	MER34	LTR/ERV1	1	542	(0)	4398115
24	11.8	6.9	2.6	chrX	23804704	23804745	(132236150)	+	(TCTCCTT)n	Simple_repeat	1	45	(0)	4398116
28	4.9	4.7	0.0	chrX	23804746	23804788	(132236107)	+	(TTTC)n	Simple_repeat	1	45	(0)	4398117
24	11.8	6.9	2.6	chrX	23804789	23804803	(132236092)	+	(TCTCCTT)n	Simple_repeat	4	17	(0)	4398118
29	3.2	0.0	0.0	chrX	23804804	23804835	(132236060)	+	(TCCT)n	Simple_repeat	1	32	(0)	4398119
24	11.8	6.9	2.6	chrX	23804836	23804848	(132236047)	+	(TCTCCTT)n	Simple_repeat	4	17	(0)	4398120
14	21.6	1.3	7.9	chrX	23804849	23804858	(132236037)	+	(CTTC)n	Simple_repeat	2	24	(0)	4398121
2314	10.1	0.3	0.0	chrX	23804861	23805157	(132235738)	C	AluSq	SINE/Alu	(15)	298	1	4398122
2258	22.2	8.1	11.5	chrX	24144802	24145855	(131895040)	C	L1MC5	LINE/L1	(459)	8845	7965	4398937
50	32.0	3.6	4.6	chrX	25013957	25014292	(131026603)	+	(TTTC)n	Simple_repeat	1	348	(0)	4400468
17	4.2	0.0	0.0	chrX	26958369	26958393	(129082502)	+	(GGAG)n	Simple_repeat	1	25	(0)	4403061
106	0.0	1.0	0.0	chrX	26958394	26958489	(129082406)	+	(AGGAA)n	Simple_repeat	1	97	(0)	4403062
2229	12.4	0.0	0.9	chrX	39968219	39968502	(116072393)	+	AluSz	SINE/Alu	1	282	(30)	4421546
65	4.3	0.0	0.0	chrX	39968503	39968574	(116072321)	+	(AAGAGAAGAG)n	Simple_repeat	1	72	(0)	4421547
2229	12.4	0.0	0.9	chrX	39968575	39968604	(116072291)	+	AluSz	SINE/Alu	283	312	(0)	4421546
504	29.0	6.2	5.7	chrX	40632676	40632892	(115408003)	+	MIRb	SINE/MIR	24	234	(34)	4422858
5796	14.5	5.5	1.7	chrX	41081531	41083538	(114957357)	C	L1MB4	LINE/L1	(0)	6180	4083	4423641
96	17.2	4.1	3.1	chrX	41262094	41262339	(114778556)	+	(CTTCC)n	Simple_repeat	1	256	(0)	4423958
2508	13.7	6.2	1.1	chrX	41277471	41277912	(114762983)	C	L1MC1	LINE/L1	(0)	6333	5868	4424010
20	13.7	0.0	0.0	chrX	41333712	41333743	(114707152)	+	(A)n	Simple_repeat	1	32	(0)	4424166
796	26.5	19.9	4.2	chrX	44675312	44675736	(111365159)	+	MLT1H	LTR/ERVL-MaLR	27	534	(15)	4429447
324	24.0	15.1	5.4	chrX	45066350	45066534	(110974361)	C	L2a	LINE/L2	(1547)	1872	1667	4430249
17	8.9	0.0	9.1	chrX	45068745	45068788	(110972107)	+	(TCCTCCC)n	Simple_repeat	1	44	(0)	4430255
61	14.2	3.2	1.6	chrX	45068789	45068866	(110972029)	+	(CTTTCT)n	Simple_repeat	4	129	(0)	4430256
930	13.8	0.0	0.0	chrX	45068873	45068995	(110971900)	C	AluJr	SINE/Alu	(189)	123	1	4430257
269	25.6	10.3	0.0	chrX	46898217	46898294	(109142601)	+	L4_A_Mam	LINE/RTE-X	4643	4729	(261)	4433014
14	12.7	0.0	0.0	chrX	46898529	46898554	(109142341)	+	(TAAA)n	Simple_repeat	1	26	(0)	4433015
1404	13.7	3.8	0.0	chrX	48912374	48912599	(107128296)	+	AluSx	SINE/Alu	1	235	(77)	4437079
44	24.8	7.3	1.5	chrX	48975677	48975867	(107065028)	+	GA-rich	Low_complexity	1	205	(0)	4437204
8481	10.6	3.6	1.4	chrX	49308269	49309527	(106731368)	+	HERV15-int	LTR/ERV1	1	1289	(7446)	4437890
1331	28.2	1.9	0.3	chrX	49309606	49309925	(106730970)	+	HERV15-int	LTR/ERV1	1063	1387	(7039)	4437891
6925	19.3	2.6	1.8	chrX	49309915	49311349	(106729546)	+	HERV15-int	LTR/ERV1	1932	3377	(5358)	4437891
2494	26.0	9.5	2.8	chrX	49912695	49913816	(106127079)	C	L2a	LINE/L2	(67)	3359	2165	4438566
90	33.8	2.5	1.4	chrX	53072231	53072382	(102968513)	+	(CT)n	Simple_repeat	1	154	(0)	4442996
31	0.0	2.9	2.8	chrX	53072383	53072417	(102968478)	+	(TC)n	Simple_repeat	1	36	(0)	4442997
90	33.8	2.5	1.4	chrX	53072418	53072695	(102968200)	+	(CT)n	Simple_repeat	1	282	(0)	4442998
324	24.0	14.2	0.8	chrX	53080822	53080943	(102959952)	C	MIRb	SINE/MIR	(117)	151	11	4443012
330	27.6	11.0	0.0	chrX	53282261	53282365	(102758530)	C	MIR3	SINE/MIR	(62)	146	29	4443386
366	26.6	8.4	7.2	chrX	53371695	53371947	(102668948)	+	HAL1	LINE/L1	2245	2493	(14)	4443592
1222	29.3	4.9	6.1	chrX	53385828	53386768	(102654127)	+	L1MC5a	LINE/L1	2021	2777	(0)	4443627
4039	22.9	4.7	5.3	chrX	53386761	53387007	(102653888)	+	L1MC5	LINE/L1	7499	7730	(1574)	4443628
225	32.5	9.7	4.2	chrX	53670344	53670500	(102370395)	+	MIR3	SINE/MIR	17	185	(23)	4444186
493	32.2	13.7	4.7	chrX	56566946	56567800	(99473095)	C	L1M5	LINE/L1	(1010)	5136	4170	4448315
1876	14.2	0.0	0.3	chrX	56767310	56767647	(99273248)	+	LTR12C	LTR/ERV1	3	339	(1240)	4448516
13	13.1	2.7	5.3	chrX	65986517	65986553	(90054342)	+	(TTTTC)n	Simple_repeat	1	38	(0)	4453152
331	26.5	3.2	7.4	chrX	65986598	65986790	(90054105)	C	MIRb	SINE/MIR	(91)	177	2	4453153
143	20.2	4.9	1.5	chrX	68422469	68422786	(87618109)	+	A-rich	Low_complexity	1	330	(0)	4456258
27	0.0	0.0	0.0	chrX	68422787	68422812	(87618083)	+	(GAGG)n	Simple_repeat	1	26	(0)	4456259
143	20.2	4.9	1.5	chrX	68422813	68422880	(87618015)	+	A-rich	Low_complexity	331	399	(0)	4456260
247	33.3	4.3	8.2	chrX	68422894	68423014	(87617881)	+	MIR3	SINE/MIR	35	155	(53)	4456261
2591	6.8	0.0	0.0	chrX	68423015	68423324	(87617571)	C	AluY	SINE/Alu	(1)	310	1	4456262
268	17.6	1.9	1.2	chrX	68463902	68464004	(87576891)	+	L1MEd	LINE/L1	1419	1500	(5240)	4456378
42	19.6	2.1	5.6	chrX	68464008	68464113	(87576782)	+	(TTCCCT)n	Simple_repeat	1	102	(0)	4456379
8661	19.0	4.2	7.9	chrX	70007652	70009547	(86031348)	C	L1MC2	LINE/L1	(1541)	4780	3048	4458969
109	23.9	4.2	0.0	chrX	70089522	70089830	(85951065)	+	(TC)n	Simple_repeat	1	322	(0)	4459087
1859	16.9	3.2	0.7	chrX	70464164	70464190	(85576705)	C	AluJb	SINE/Alu	(2)	310	284	4459722
84	1.1	0.0	4.1	chrX	70464191	70464287	(85576608)	+	(TTTCC)n	Simple_repeat	1	97	(0)	4459723
1859	16.9	3.2	0.7	chrX	70464288	70464561	(85576334)	C	AluJb	SINE/Alu	(29)	283	1	4459722
509	34.6	12.2	7.4	chrX	71000274	71000495	(85040400)	+	L2c	LINE/L2	2130	2354	(1065)	4460585
15	24.0	2.8	5.4	chrX	71283339	71283410	(84757485)	+	(TCTCCC)n	Simple_repeat	1	74	(0)	4461190
13	14.7	3.3	0.0	chrX	71533537	71533566	(84507329)	+	(CTTG)n	Simple_repeat	1	31	(0)	4461802
20	10.4	0.0	0.0	chrX	73830130	73830161	(82210734)	+	(AAG)n	Simple_repeat	1	32	(0)	4464800
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1580	28.7	2.5	1.3	chrX	76806022	76806491	(79234404)	C	LTR16B1	LTR/ERVL	(2)	478	3	4467755
1169	29.1	3.0	1.7	chrX	76806494	76806853	(79234042)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	4862	4467755
319	25.2	40.5	3.4	chrX	77556412	77556593	(78484302)	+	MIRc	SINE/MIR	7	258	(10)	4468460
19	24.3	6.0	2.2	chrX	83108357	83108440	(72932455)	+	(CCTCT)n	Simple_repeat	1	89	(0)	4474551
56	29.8	1.1	1.7	chrX	83509459	83509725	(72531170)	+	(TCTTT)n	Simple_repeat	1	265	(0)	4474961
828	22.4	3.0	10.2	chrX	87900638	87900930	(68139965)	+	LTR12F	LTR/ERV1	223	493	(26)	4479666
447	17.7	1.5	0.2	chrX	101384994	101385089	(54655806)	C	MIR	SINE/MIR	(21)	241	153	4495950
280	27.7	3.0	6.2	chrX	102887926	102887936	(53152959)	C	L1MC4	LINE/L1	(428)	2563	2553	4497775
1952	14.1	0.0	0.7	chrX	102887937	102888212	(53152683)	C	AluJb	SINE/Alu	(38)	274	1	4497776
12	23.4	0.0	4.9	chrX	103357258	103357298	(52683597)	+	(CTCTT)n	Simple_repeat	1	41	(0)	4498494
1798	15.5	0.0	2.1	chrX	107658440	107658723	(48382172)	+	AluJr	SINE/Alu	1	278	(34)	4504571
122	16.1	1.7	4.8	chrX	107658724	107659013	(48381882)	+	GA-rich	Low_complexity	1	295	(0)	4504572
2012	25.7	8.9	10.6	chrX	107910691	107910768	(48130127)	C	HAL1	LINE/L1	(1054)	1453	1382	4505032
79	0.0	0.0	0.0	chrX	107910769	107910838	(48130057)	+	(TTTCC)n	Simple_repeat	1	70	(0)	4505037
2012	25.7	8.9	10.6	chrX	107910839	107910880	(48130015)	C	HAL1	LINE/L1	(1126)	1381	1379	4505032
1715	17.1	4.6	0.3	chrX	109712694	109712986	(46327909)	+	AluJb	SINE/Alu	2	307	(5)	4507219
23	20.4	4.7	1.5	chrX	109847721	109847784	(46193111)	+	GA-rich	Low_complexity	1	67	(0)	4507457
13	21.7	4.9	4.7	chrX	110157427	110157487	(45883408)	+	(TTTCCC)n	Simple_repeat	1	64	(0)	4508025
2303	8.8	0.0	0.0	chrX	110249620	110249892	(45791003)	+	AluSc	SINE/Alu	1	273	(36)	4508131
33	12.2	3.4	3.1	chrX	110249893	110249960	(45790935)	+	A-rich	Low_complexity	1	68	(0)	4508132
77	11.7	5.1	1.2	chrX	110505049	110505205	(45535690)	+	(TTCCTT)n	Simple_repeat	1	163	(0)	4508519
2021	15.1	0.7	0.7	chrX	110505206	110505510	(45535385)	C	AluSg	SINE/Alu	(4)	306	2	4508520
438	29.1	2.5	0.0	chrX	118536704	118536820	(37504075)	+	L2b	LINE/L2	3238	3357	(18)	4519433
59	1.3	0.0	8.5	chrX	118607018	118607111	(37433784)	+	(TTCCT)n	Simple_repeat	1	94	(0)	4519562
2377	8.9	0.7	0.3	chrX	118607113	118607414	(37433481)	C	AluSx1	SINE/Alu	(9)	303	1	4519563
168	28.7	2.3	3.4	chrX	119801625	119802233	(36238662)	+	(TCTT)n	Simple_repeat	1	623	(0)	4521872
3653	14.9	0.7	0.0	chrX	119826745	119827306	(36213589)	+	HSMAR2	DNA/TcMar-Mariner	623	1188	(114)	4521928
5429	12.1	4.2	2.6	chrX	120087083	120088215	(35952680)	C	HERV15-int	LTR/ERV1	(7437)	1298	1	4522425
18	11.2	3.3	0.0	chrX	120275281	120275310	(35765585)	+	(GA)n	Simple_repeat	1	31	(0)	4522683
43	14.5	0.0	0.0	chrX	120309670	120309745	(35731150)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	4522742
16	12.1	3.6	0.0	chrX	120309745	120309772	(35731123)	+	(TG)n	Simple_repeat	1	29	(0)	4522743
12	23.9	0.0	2.4	chrX	120561001	120561041	(35479854)	+	G-rich	Low_complexity	1	41	(0)	4523167
950	14.8	0.0	0.0	chrX	123002803	123002937	(33037958)	+	FLAM_C	SINE/Alu	1	135	(8)	4526124
81	19.2	2.1	2.1	chrX	123002938	123003125	(33037770)	+	A-rich	Low_complexity	1	192	(0)	4526125
402	26.8	7.3	0.0	chrX	124211282	124211408	(31829487)	C	Helitron3Na_Mam	RC/Helitron	(319)	167	31	4528272
16	4.2	0.0	3.7	chrX	124211535	124211561	(31829334)	+	(AAAGG)n	Simple_repeat	1	27	(0)	4528273
133	18.6	2.4	3.3	chrX	124219816	124220144	(31820751)	+	(CTTT)n	Simple_repeat	1	337	(0)	4528287
407	37.7	6.2	1.3	chrX	124220150	124220185	(31820710)	C	L1ME1	LINE/L1	(292)	5902	5863	4528288
168	9.3	5.4	1.0	chrX	129715627	129715924	(26324971)	+	A-rich	Low_complexity	1	314	(0)	4535170
45547	8.4	2.1	2.3	chrX	130280532	130283685	(25757210)	+	HERV4_I-int	LTR/ERV1	1	3108	(3431)	4536284
27	24.3	0.0	4.8	chrX	130338985	130339068	(25701827)	+	(CTCC)n	Simple_repeat	1	84	(0)	4536392
2062	13.6	1.9	1.0	chrX	130339076	130339384	(25701511)	C	AluSz	SINE/Alu	(0)	312	1	4536393
28	8.1	0.0	0.0	chrX	130502242	130502281	(25538614)	+	(CTTC)n	Simple_repeat	1	40	(0)	4536640
14	29.3	3.3	4.3	chrX	130502465	130502537	(25538358)	+	(TCTCTC)n	Simple_repeat	1	94	(0)	4536641
265	13.2	0.0	0.0	chrX	130506278	130506315	(25534580)	+	Alu	SINE/Alu	1	38	(95)	4536648
13	29.9	1.7	1.7	chrX	130506329	130506387	(25534508)	+	(TCTA)n	Simple_repeat	1	60	(0)	4536649
20	24.1	1.8	0.0	chrX	130506540	130506594	(25534301)	+	(TTTC)n	Simple_repeat	1	56	(0)	4536650
35	30.5	3.3	2.7	chrX	130507203	130507384	(25533511)	+	(CTTC)n	Simple_repeat	1	188	(0)	4536655
502	29.5	11.4	7.3	chrX	132016698	132017000	(24023895)	+	L2c	LINE/L2	3033	3349	(38)	4538791
19	12.1	0.0	0.0	chrX	132017020	132017047	(24023848)	+	(A)n	Simple_repeat	1	28	(0)	4538794
12	22.2	7.3	1.7	chrX	132017036	132017090	(24023805)	+	GA-rich	Low_complexity	1	59	(0)	4538795
222	31.4	16.0	3.3	chrX	132474683	132475018	(23565877)	+	L2	LINE/L2	1747	2133	(1286)	4539396
2289	11.0	1.6	0.0	chrX	132608000	132608307	(23432588)	+	AluSq	SINE/Alu	1	313	(0)	4539610
113	7.3	3.2	2.1	chrX	132608310	132608494	(23432401)	+	(AAAG)n	Simple_repeat	1	191	(0)	4539611
14	29.7	4.7	2.2	chrX	134738098	134738198	(21302697)	+	A-rich	Low_complexity	1	103	(0)	4543286
16	25.4	0.0	2.3	chrX	134738131	134738174	(21302721)	+	GA-rich	Low_complexity	1	44	(0)	4543287
2571	6.8	0.3	0.0	chrX	134947501	134947810	(21093085)	+	AluY	SINE/Alu	1	311	(0)	4543695
569	24.1	9.6	17.1	chrX	134947811	134947872	(21093023)	C	L2a	LINE/L2	(340)	3086	3031	4543691
14	8.8	0.0	0.0	chrX	134947979	134948002	(21092893)	+	(TCTT)n	Simple_repeat	1	24	(0)	4543696
12	18.3	0.0	3.0	chrX	134948003	134948008	(21092887)	+	(TTCC)n	Simple_repeat	4	33	(0)	4543697
2250	11.7	0.7	0.3	chrX	134948009	134948315	(21092580)	C	AluSx1	SINE/Alu	(3)	309	2	4543698
10325	29.5	4.6	4.8	chrX	135060463	135064609	(20976286)	+	MER66-int	LTR/ERV1	796	4793	(2963)	4543895
23	29.0	0.0	5.3	chrX	136768954	136769047	(19271848)	+	A-rich	Low_complexity	1	94	(0)	4546547
623	25.4	11.4	2.0	chrX	136861132	136861384	(19179511)	+	L2	LINE/L2	1252	1531	(1888)	4546742
2202	10.6	0.3	0.0	chrX	136861391	136861682	(19179213)	+	AluSq	SINE/Alu	1	293	(20)	4546743
54	22.7	1.9	7.1	chrX	136911336	136911542	(19129353)	+	(TTCC)n	Simple_repeat	1	211	(0)	4546853
2222	11.2	0.6	4.1	chrX	136911543	136911862	(19129033)	C	AluSx1	SINE/Alu	(2)	310	2	4546854
2342	11.5	0.0	0.0	chrX	136995458	136995769	(19045126)	+	AluSz	SINE/Alu	1	312	(0)	4547030
1680	11.2	0.0	2.5	chrX	136995903	136996143	(19044752)	C	AluSz6	SINE/Alu	(0)	312	78	4547031
57	34.8	2.5	2.4	chrX	137033304	137033623	(19007272)	+	GA-rich	Low_complexity	1	328	(0)	4547080
47	0.0	0.0	0.0	chrX	140742840	140742879	(15298016)	+	(AG)n	Simple_repeat	1	40	(0)	4552717
26	8.6	4.1	6.8	chrX	140742880	140742894	(15298001)	+	GA-rich	Low_complexity	1	54	(0)	4552718
25	7.9	2.4	0.0	chrX	140742895	140742935	(15297960)	+	(GGAAAG)n	Simple_repeat	1	42	(0)	4552719
2433	10.2	0.0	0.6	chrX	140742941	140743254	(15297641)	+	AluSx1	SINE/Alu	1	312	(0)	4552720
86	30.2	3.5	3.6	chrX	146041804	146042234	(9998661)	+	GA-rich	Low_complexity	1	446	(0)	4559951
1797	15.5	5.8	0.0	chrX	147916733	147917022	(8123873)	C	AluSz6	SINE/Alu	(3)	309	2	4562596
292	26.7	4.7	4.7	chrX	149291205	149291310	(6749585)	C	MIR3	SINE/MIR	(63)	145	40	4564426
1761	19.1	5.2	4.2	chrX	149291317	149291677	(6749218)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	4564427
247	35.8	7.3	2.5	chrX	149605565	149605839	(6435056)	+	L2	LINE/L2	2490	2778	(641)	4564832
35	0.0	0.0	0.0	chrX	149830732	149830761	(6210134)	+	(GA)n	Simple_repeat	1	30	(0)	4565072
3317	11.7	2.4	0.6	chrX	149830852	149831435	(6209460)	+	HERVIP10FH-int	LTR/ERV1	2041	2633	(2382)	4565073
5314	20.9	2.9	5.0	chrX	151113095	151113354	(4927541)	C	L1PA13	LINE/L1	(4626)	2159	1909	4567136
57	1.7	0.0	3.1	chrX	151113355	151113419	(4927476)	+	(TTTCCTTTCC)n	Simple_repeat	1	65	(0)	4567137
5314	20.9	2.9	5.0	chrX	151113420	151113434	(4927461)	C	L1PA13	LINE/L1	(4877)	1908	1900	4567136
1768	19.8	2.3	0.7	chrX	151113435	151113737	(4927158)	C	AluJo	SINE/Alu	(1)	311	4	4567138
515	30.3	17.4	2.1	chrX	154317295	154317943	(1722952)	C	L2b	LINE/L2	(199)	3176	2410	4571690
317	28.8	8.1	1.6	chrX	154803046	154803172	(1237723)	C	MIRb	SINE/MIR	(62)	206	71	4572450