17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
1386	23.6	10.9	6.3	chr1	1858667	1859016	(247097406)	+	MER119	DNA/hAT-Charlie	31	411	(172)	2482
2156	12.6	0.3	0.0	chr1	1859017	1859317	(247097105)	C	AluSz	SINE/Alu	(6)	306	5	2483
1386	23.6	10.9	6.3	chr1	1859318	1859401	(247097021)	+	MER119	DNA/hAT-Charlie	412	478	(105)	2482
387	10.4	30.8	4.2	chr1	1859402	1859497	(247096925)	+	AluJo	SINE/Alu	1	133	(179)	2484
1289	4.9	0.0	3.5	chr1	1859896	1860090	(247096332)	+	L1PA5	LINE/L1	5987	6154	(0)	2487
2212	14.2	0.6	0.0	chr1	1860091	1860443	(247095979)	+	L1PA16	LINE/L1	5806	6160	(6)	2488
227	28.2	8.6	0.0	chr1	6200028	6200112	(242756310)	+	L2b	LINE/L2	596	688	(2731)	7813
693	27.2	7.2	1.0	chr1	6386330	6386577	(242569845)	C	L1MC5	LINE/L1	(0)	9304	9038	8114
1764	19.1	0.0	2.5	chr1	6386578	6386892	(242569530)	+	AluJb	SINE/Alu	5	311	(1)	8115
1863	8.0	6.4	3.5	chr1	8876845	8876992	(240079430)	C	AluSq2	SINE/Alu	(13)	300	135	12443
1726	8.5	12.5	0.0	chr1	8876993	8877251	(240079171)	C	AluY	SINE/Alu	(15)	296	1	12444
12	13.7	6.2	0.0	chr1	9719316	9719347	(239237075)	+	(GCTGG)n	Simple_repeat	1	34	(0)	14243
2305	9.8	0.0	0.3	chr1	9719379	9719674	(239236748)	+	AluSx3	SINE/Alu	1	295	(16)	14244
15	0.0	0.0	0.0	chr1	9823863	9823881	(239132541)	+	(GCC)n	Simple_repeat	1	19	(0)	14455
658	22.9	1.4	0.0	chr1	9841753	9841892	(239114530)	C	MLT1I	LTR/ERVL-MaLR	(269)	142	1	14494
432	24.5	15.6	0.0	chr1	10248689	10248839	(238707583)	C	L2	LINE/L2	(687)	2732	2554	15425
68	23.8	1.8	6.6	chr1	11272907	11273190	(237683232)	+	(CCGCC)n	Simple_repeat	1	289	(0)	17351
670	25.5	5.9	1.9	chr1	12118675	12118854	(236837568)	+	LTR41B	LTR/ERVL	1	192	(566)	19205
2425	8.7	0.0	0.3	chr1	12118855	12119163	(236837259)	C	AluSg	SINE/Alu	(2)	308	1	19206
182	19.4	2.7	0.0	chr1	15038420	15038455	(233917967)	C	L2a	LINE/L2	(12)	3414	3378	24408
212	28.1	7.7	2.0	chr1	15128505	15128602	(233827820)	C	MER5A	DNA/hAT-Charlie	(47)	142	39	24596
1276	24.4	3.6	5.9	chr1	15609644	15609983	(233346439)	C	MLT1G3	LTR/ERVL-MaLR	(61)	534	203	25668
15	5.6	0.0	0.0	chr1	15834460	15834478	(233121944)	+	(T)n	Simple_repeat	1	19	(0)	26169
517	24.1	1.7	4.9	chr1	15964277	15964435	(232991987)	+	L1ME3F	LINE/L1	4500	4653	(1493)	26410
2139	13.6	0.3	0.0	chr1	15964436	15964736	(232991686)	+	AluJb	SINE/Alu	1	302	(10)	26412
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
197	35.3	4.7	2.9	chr1	17765645	17765749	(231190673)	+	L2a	LINE/L2	3221	3327	(99)	30183
544	26.3	3.1	1.9	chr1	21270167	21270325	(227686097)	+	MIRb	SINE/MIR	77	237	(31)	37538
549	30.1	14.9	0.9	chr1	21270433	21270657	(227685765)	+	MIRc	SINE/MIR	2	263	(5)	37539
684	27.1	4.6	1.6	chr1	21338375	21338565	(227617857)	C	MIRb	SINE/MIR	(45)	223	27	37704
281	31.9	9.5	6.4	chr1	23033685	23033949	(225922473)	C	L2	LINE/L2	(423)	2996	2723	41498
638	29.3	5.0	3.8	chr1	23531790	23532027	(225424395)	C	MIRb	SINE/MIR	(6)	262	22	42656
209	22.7	0.0	2.2	chr1	24330669	24330713	(224625709)	+	L2c	LINE/L2	3120	3163	(224)	44677
3735	15.8	11.5	1.2	chr1	25232782	25233512	(223722910)	+	LTR8B	LTR/ERV1	2	817	(3)	46664
1080	21.2	17.1	0.0	chr1	25854650	25854936	(223101486)	C	MLT1F	LTR/ERVL-MaLR	(66)	482	137	47945
707	28.8	8.2	4.8	chr1	25923903	25924362	(223032060)	+	L1ME4b	LINE/L1	307	783	(109)	48119
15	19.1	0.0	6.4	chr1	26111803	26111849	(222844573)	+	(CGG)n	Simple_repeat	1	47	(0)	48599
502	29.9	7.5	0.5	chr1	26477682	26477893	(222478529)	C	MLT1L	LTR/ERVL-MaLR	(245)	365	138	49434
12	18.1	0.0	3.0	chr1	26697693	26697725	(222258697)	+	(CTTC)n	Simple_repeat	1	33	(0)	50010
4205	10.1	8.8	0.3	chr1	27049501	27050089	(221906333)	C	LTR9B	LTR/ERV1	(0)	644	1	50797
6172	8.8	1.3	1.9	chr1	27247358	27247705	(221708717)	C	L1PREC2	LINE/L1	(35)	6125	5775	51324
2351	10.9	0.3	0.0	chr1	27247706	27248017	(221708405)	C	AluSq2	SINE/Alu	(0)	313	1	51325
534	23.6	10.4	0.1	chr1	27516204	27516361	(221440061)	C	MIRb	SINE/MIR	(73)	195	15	51939
246	25.0	12.4	2.4	chr1	27650813	27650935	(221305487)	C	LTR16E1	LTR/ERVL	(32)	506	370	52217
1641	17.8	0.0	6.0	chr1	28364892	28364964	(220591458)	C	AluJb	SINE/Alu	(17)	295	227	54024
2081	20.0	10.5	3.6	chr1	28364965	28365488	(220590934)	+	LTR6A	LTR/ERV1	1	564	(0)	54025
2611	16.6	9.4	4.8	chr1	28417219	28417737	(220538685)	C	MER44B	DNA/TcMar-Tigger	(0)	550	6	54148
12	20.7	5.1	0.0	chr1	28553062	28553100	(220403322)	+	(GCCCC)n	Simple_repeat	1	41	(0)	54505
2461	7.4	0.0	1.0	chr1	28747844	28748152	(220208270)	+	AluY	SINE/Alu	1	306	(5)	55040
505	19.0	25.6	0.0	chr1	30778294	30778456	(218177966)	+	MIR	SINE/MIR	21	239	(23)	59041
667	27.5	4.6	11.8	chr1	30778486	30778840	(218177582)	+	MLT1K	LTR/ERVL-MaLR	101	428	(167)	59042
1999	17.2	3.8	0.0	chr1	30917883	30918266	(218038156)	C	MER57F	LTR/ERV1	(28)	407	9	59388
1990	12.6	0.4	0.4	chr1	30918286	30918562	(218037860)	+	AluSx	SINE/Alu	1	277	(35)	59389
325	28.0	13.8	0.0	chr1	31855773	31855872	(217100550)	+	MIR	SINE/MIR	12	127	(135)	61477
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
429	20.5	6.0	1.2	chr1	33302530	33302645	(215653777)	+	MLT1O	LTR/ERVL-MaLR	54	172	(500)	64882
813	19.3	7.1	0.0	chr1	33302689	33302859	(215653563)	+	MER63A	DNA/hAT-Blackjack	27	210	(0)	64883
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
208	20.2	3.3	1.1	chr1	37177330	37177415	(211779007)	C	L2a	LINE/L2	(317)	3109	3021	72251
1211	9.1	2.4	0.0	chr1	40520289	40520453	(208435969)	+	MLT2A2	LTR/ERVL	393	561	(0)	78979
4726	13.3	3.8	4.5	chr1	40520454	40520818	(208435604)	+	Tigger1	DNA/TcMar-Tigger	1219	1592	(826)	78980
252	28.8	0.0	2.4	chr1	41123899	41123980	(207832442)	+	MER5A1	DNA/hAT-Charlie	25	104	(62)	80224
606	12.5	2.4	12.3	chr1	42577940	42578048	(206378374)	C	L1MA5A	LINE/L1	(46)	6251	6154	82759
186	33.3	7.0	1.9	chr1	42684187	42684348	(206272074)	C	MamSINE1	SINE/tRNA-RTE	(7)	283	113	82977
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
15	20.1	2.9	0.0	chr1	43853708	43853741	(205102681)	+	(GT)n	Simple_repeat	1	35	(0)	85039
493	25.6	8.8	7.6	chr1	46115121	46115357	(202841065)	+	MLT1K	LTR/ERVL-MaLR	346	585	(10)	89365
2311	10.4	0.0	0.0	chr1	46135750	46136048	(202820374)	+	AluSg	SINE/Alu	1	299	(11)	89407
26	20.5	0.0	4.5	chr1	46173781	46173847	(202782575)	+	(CA)n	Simple_repeat	1	67	(0)	89488
23096	10.2	1.7	4.7	chr1	46728040	46731434	(202224988)	+	L1PA7	LINE/L1	1	3401	(3060)	90551
283	29.8	12.4	3.8	chr1	47175585	47175786	(201780636)	C	MIR	SINE/MIR	(50)	218	4	91038
1032	27.4	10.6	2.8	chr1	51513131	51513633	(197442789)	+	L1ME4b	LINE/L1	323	869	(23)	98821
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
2098	17.6	7.0	11.5	chr1	52937735	52938240	(196018182)	C	MER66D	LTR/ERV1	(0)	484	3	102131
7059	11.0	1.7	2.2	chr1	53444448	53445459	(195510963)	+	LTR13	LTR/ERVK	1	1007	(0)	103096
276	23.7	3.5	1.2	chr1	54052722	54052803	(194903619)	+	L2c	LINE/L2	3245	3355	(32)	104307
356	30.4	5.6	2.2	chr1	54115620	54115757	(194840665)	C	LTR88a	LTR/Gypsy?	(16)	800	658	104443
1564	27.1	2.6	8.5	chr1	54528535	54529066	(194427356)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	6	105299
466	29.0	2.2	3.3	chr1	54950817	54950998	(194005424)	C	MamRep564	Unknown	(70)	287	108	106214
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
1292	34.1	3.3	3.4	chr1	59831163	59831882	(189124540)	C	L1ME1	LINE/L1	(5626)	774	63	115515
1435	21.3	8.1	0.6	chr1	59845009	59845329	(189111093)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	16	115534
2052	14.9	6.1	6.5	chr1	61743790	61744045	(187212377)	C	MER65D	LTR/ERV1	(29)	444	186	118749
1396	14.5	12.7	2.6	chr1	61744046	61744314	(187212108)	+	AluJr	SINE/Alu	13	312	(0)	118750
486	27.1	9.3	0.0	chr1	63149247	63149412	(185807010)	C	MER117	DNA/hAT-Charlie	(0)	197	15	121474
283	25.7	18.6	2.2	chr1	63784616	63784794	(185171628)	+	MIRb	SINE/MIR	24	238	(30)	122696
330	36.6	8.9	1.3	chr1	64233631	64233785	(184722637)	+	Tigger19b	DNA/TcMar-Tigger	231	398	(152)	123521
216	23.0	10.8	0.0	chr1	64474135	64474208	(184482214)	+	MamRTE1	LINE/RTE-BovB	2987	3069	(743)	123961
191	25.6	4.9	12.0	chr1	64474569	64474701	(184481721)	C	L2c	LINE/L2	(21)	3366	3244	123963
408	31.0	5.6	7.2	chr1	64474711	64475002	(184481420)	+	MamRTE1	LINE/RTE-BovB	3210	3496	(316)	123961
472	30.6	11.4	6.0	chr1	64934601	64934899	(184021523)	+	L2c	LINE/L2	3053	3369	(18)	124751
1564	27.3	7.6	5.2	chr1	65074857	65075510	(183880912)	C	L2	LINE/L2	(1675)	1744	1074	125037
1443	26.3	8.5	2.0	chr1	66403190	66403596	(182552826)	C	LTR16	LTR/ERVL	(2)	436	1	127181
384	27.5	6.4	2.9	chr1	66541182	66541286	(182415136)	C	L2a	LINE/L2	(1)	3425	3317	127372
938	25.3	10.6	4.8	chr1	67352270	67352622	(181603800)	C	MLT1J	LTR/ERVL-MaLR	(67)	445	70	128682
554	27.8	5.1	0.5	chr1	70497311	70497498	(178458924)	C	MER63A	DNA/hAT-Blackjack	(0)	210	14	133531
1648	20.9	7.3	0.6	chr1	77657347	77657679	(171298743)	C	Tigger17c	DNA/TcMar-Tigger	(830)	358	2	143241
1322	25.0	1.8	4.0	chr1	81438215	81438660	(167517762)	+	MER63B	DNA/hAT-Blackjack	1	436	(0)	148443
1627	25.4	6.4	10.0	chr1	83123686	83124336	(165832086)	C	MLT1E2	LTR/ERVL-MaLR	(1)	626	1	150782
1738	22.1	0.5	1.4	chr1	83124340	83124706	(165831716)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	2	150783
11523	16.8	3.7	1.0	chr1	84115917	84117938	(164838484)	C	L1MA4A	LINE/L1	(1056)	5789	3700	152093
1708	30.4	0.2	0.0	chr1	84117940	84118383	(164838039)	C	L1MA4A	LINE/L1	(6393)	456	12	152093
44	2.4	0.0	0.0	chr1	84302536	84302577	(164653845)	+	(AC)n	Simple_repeat	1	42	(0)	152334
6851	9.1	2.8	1.0	chr1	84510183	84511302	(164445120)	+	L1MA3	LINE/L1	5165	6305	(0)	152620
2495	10.8	6.6	2.7	chr1	85049842	85050290	(163906132)	C	LTR21A	LTR/ERV1	(13)	468	1	153510
377	29.2	8.7	0.0	chr1	85613293	85613429	(163342993)	C	MIR3	SINE/MIR	(7)	201	52	154454
323	35.3	3.6	0.0	chr1	86778847	86778979	(162177443)	C	MIRb	SINE/MIR	(118)	150	13	156084
239	39.6	2.1	0.7	chr1	87743437	87743576	(161212846)	+	MIRc	SINE/MIR	3	144	(124)	157506
379	29.2	8.4	3.7	chr1	92031482	92031616	(156924806)	+	MIR3	SINE/MIR	3	144	(64)	163752
416	29.7	6.3	2.6	chr1	92087575	92087726	(156868696)	C	L2c	LINE/L2	(69)	3318	3161	163862
2265	19.5	4.4	8.8	chr1	92950978	92951633	(156004789)	+	MLT1E2	LTR/ERVL-MaLR	1	626	(1)	165408
11199	13.7	8.0	5.2	chr1	93147638	93149869	(155806553)	+	Tigger7	DNA/TcMar-Tigger	102	2401	(90)	165793
700	25.9	2.1	3.6	chr1	93350860	93351051	(155605371)	C	MER91B	DNA/hAT-Tip100	(1)	189	1	166159
182	26.3	9.5	1.7	chr1	93351052	93351109	(155605313)	+	MIR1_Amn	SINE/MIR	96	158	(72)	166160
12	20.6	2.9	0.0	chr1	93351199	93351232	(155605190)	+	A-rich	Low_complexity	1	35	(0)	166161
305	28.0	3.3	2.5	chr1	93848110	93848230	(155108192)	C	MER5A	DNA/hAT-Charlie	(16)	173	52	166927
968	16.8	13.2	1.6	chr1	93874177	93874369	(155082053)	+	MER20	DNA/hAT-Charlie	1	219	(0)	166963
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
3289	16.9	2.1	5.8	chr1	100362799	100363434	(148592988)	C	LTR9	LTR/ERV1	(0)	612	1	176463
558	33.5	3.9	8.1	chr1	109083535	109083946	(139872476)	+	L2c	LINE/L2	2993	3387	(0)	187951
14	5.0	0.0	0.0	chr1	114757666	114757686	(134198736)	+	(CAC)n	Simple_repeat	1	21	(0)	197230
290	27.6	13.6	2.3	chr1	115469958	115470087	(133486335)	+	L2a	LINE/L2	3280	3426	(0)	198233
230	29.4	11.9	2.1	chr1	115977591	115977782	(132978640)	C	L2b	LINE/L2	(30)	3396	3202	199012
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
654	1.4	0.0	0.0	chr1	148265108	148265179	(100691243)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	215393
1114	23.9	6.0	7.5	chr1	148355955	148356476	(100599946)	+	MER39	LTR/ERV1	1	707	(0)	215544
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
28	0.0	0.0	0.0	chr1	150364656	150364681	(98591741)	+	(CCG)n	Simple_repeat	1	26	(0)	218877
12	9.2	0.0	4.0	chr1	150364717	150364741	(98591681)	+	(GGC)n	Simple_repeat	1	25	(0)	218878
372	28.4	6.6	0.0	chr1	152458720	152458846	(96497576)	C	MIRb	SINE/MIR	(95)	173	38	222817
870	11.3	0.0	0.9	chr1	153568963	153569077	(95387345)	+	AluJr	SINE/Alu	171	284	(28)	224298
2182	9.7	1.7	0.0	chr1	153671905	153672193	(95284229)	+	AluSx1	SINE/Alu	1	294	(18)	224509
508	26.2	3.2	1.1	chr1	153672194	153672371	(95284051)	C	L1MEg	LINE/L1	(4935)	1149	967	224510
669	17.2	2.0	0.2	chr1	154295734	154295883	(94660539)	+	L1M4a1	LINE/L1	1631	1779	(800)	225844
1610	10.5	0.0	22.4	chr1	154295884	154296085	(94660337)	+	AluSz6	SINE/Alu	1	133	(179)	225857
443	26.6	4.0	9.7	chr1	154559240	154559476	(94396946)	+	MIRc	SINE/MIR	20	242	(26)	226416
206	34.9	11.2	2.9	chr1	154975389	154975559	(93980863)	C	L2c	LINE/L2	(16)	3371	3185	227129
248	33.7	1.0	0.0	chr1	156678277	156678371	(92278051)	C	MIR	SINE/MIR	(5)	257	162	230552
696	30.8	8.9	0.0	chr1	156688988	156689234	(92267188)	+	L3b	LINE/CR1	3741	4011	(88)	230581
13	18.9	2.8	0.0	chr1	158113627	158113662	(90842760)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	232694
848	21.9	9.5	0.0	chr1	161427515	161427715	(87528707)	+	MER34	LTR/ERV1	321	542	(0)	237525
20879	15.2	2.0	0.9	chr1	161483098	161487895	(87468527)	C	HUERS-P3-int	LTR/ERV1	(3810)	5109	1	237613
350	29.6	8.5	0.9	chr1	162056296	162056404	(86900018)	+	MIR3	SINE/MIR	17	134	(134)	238530
1572	16.8	12.7	1.9	chr1	162906134	162906454	(86049968)	+	MLT1A0	LTR/ERVL-MaLR	3	363	(2)	239929
1323	15.8	0.9	0.5	chr1	164705040	164705255	(84251167)	C	MER20	DNA/hAT-Charlie	(1)	218	2	242521
962	21.5	10.3	0.5	chr1	165069855	165070055	(83886367)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	243065
32	0.0	0.0	0.0	chr1	165393196	165393225	(83563197)	+	(TCTGTGG)n	Simple_repeat	1	30	(0)	243552
458	29.4	6.1	1.2	chr1	165539369	165539540	(83416882)	+	MIR	SINE/MIR	9	189	(73)	243823
241	31.6	3.0	3.9	chr1	165539597	165539698	(83416724)	C	MIRb	SINE/MIR	(79)	189	89	243824
1705	19.2	0.0	0.7	chr1	167507558	167507848	(81448574)	+	AluJo	SINE/Alu	7	295	(17)	246807
405	23.7	12.0	6.6	chr1	167803571	167803751	(81152671)	C	MIR3	SINE/MIR	(8)	200	9	247340
273	31.2	12.5	5.9	chr1	168321996	168322353	(80634069)	+	L2c	LINE/L2	2302	2686	(733)	248200
1963	14.2	12.6	1.0	chr1	173507536	173507927	(75448495)	+	MLT1C	LTR/ERVL-MaLR	20	463	(4)	255691
231	29.2	1.1	1.1	chr1	174954659	174954748	(74001674)	C	MamRep38	DNA/hAT	(2)	293	204	258001
292	14.8	1.8	0.0	chr1	175911207	175911260	(73045162)	C	MER57A-int	LTR/ERV1	(4467)	1720	1666	259433
1673	14.8	1.9	4.9	chr1	175911312	175911724	(73044698)	C	MER57A-int	LTR/ERV1	(4532)	1655	1356	259439
3681	21.8	4.2	5.5	chr1	178781984	178783491	(70172931)	+	L1MCb	LINE/L1	6	1574	(5177)	263655
5001	14.8	5.9	4.6	chr1	179925295	179926010	(69030412)	+	Tigger2b_Pri	DNA/TcMar-Tigger	361	1068	(0)	265543
658	29.7	3.1	1.6	chr1	180920931	180921022	(68035400)	C	MIRb	SINE/MIR	(8)	260	164	267173
527	11.4	0.0	0.0	chr1	181937260	181937338	(67019084)	C	L1PA15	LINE/L1	(265)	5900	5822	268643
5535	25.3	18.9	0.8	chr1	182079048	182081291	(66875131)	C	L2a	LINE/L2	(290)	3136	404	268812
401	31.9	9.2	4.8	chr1	182081340	182081589	(66874833)	+	L2b	LINE/L2	2930	3191	(184)	268813
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
180	32.2	4.8	13.5	chr1	183060897	183061104	(65895318)	C	L2	LINE/L2	(553)	2866	2678	270509
189	23.3	14.9	2.3	chr1	183543580	183543667	(65412755)	+	Penelope1_Vert	LINE/Penelope	284	384	(703)	271304
2820	12.7	0.8	6.6	chr1	184771101	184771597	(64184825)	+	LTR9	LTR/ERV1	1	468	(144)	273192
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
455	23.0	4.4	0.6	chr1	201480658	201480810	(47475612)	+	MER5B	DNA/hAT-Charlie	5	161	(28)	296098
17	24.1	0.0	2.0	chr1	201480833	201480883	(47475539)	+	(GGCGG)n	Simple_repeat	1	51	(0)	296099
251	28.4	4.3	1.1	chr1	201713196	201713284	(47243138)	+	MIR3	SINE/MIR	76	167	(41)	296521
234	29.8	8.7	4.5	chr1	203031665	203031840	(45924582)	C	Charlie19a	DNA/hAT-Charlie	(12)	374	191	298946
721	28.9	5.2	1.7	chr1	203271098	203271336	(45685086)	C	MLT1J	LTR/ERVL-MaLR	(264)	248	1	299324
205	32.3	17.4	0.8	chr1	203271337	203271470	(45684952)	+	MIRb	SINE/MIR	84	244	(24)	299325
442	28.2	0.0	6.8	chr1	204011354	204011486	(44944936)	C	MLT1F2	LTR/ERVL-MaLR	(424)	124	1	300770
671	26.8	17.2	0.3	chr1	204011492	204011881	(44944541)	C	L2a	LINE/L2	(267)	3159	2695	300767
258	22.9	10.3	0.0	chr1	204521622	204521682	(44434740)	C	MLT1H2	LTR/ERVL-MaLR	(353)	196	129	301708
1229	29.4	8.0	3.4	chr1	206680973	206681450	(42274972)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	2	305513
516	26.2	1.6	2.4	chr1	207885013	207885137	(41071285)	+	MIR3	SINE/MIR	82	205	(3)	307280
215	35.0	4.2	7.1	chr1	209399865	209400061	(39556361)	C	MER131	DNA?	(23)	192	2	309591
710	26.8	15.0	0.0	chr1	212749801	212750050	(36206372)	C	MER20B	DNA/hAT-Charlie	(485)	298	5	315067
225	34.1	4.3	3.3	chr1	212750074	212750164	(36206258)	+	L2b	LINE/L2	3262	3353	(22)	315081
788	31.3	18.3	1.7	chr1	214568453	214568792	(34387630)	+	L2c	LINE/L2	2012	2444	(975)	317912
3006	17.7	4.4	2.3	chr1	220747377	220748023	(28208399)	C	MER67B	LTR/ERV1	(0)	661	1	326675
367	27.9	1.8	4.6	chr1	222464743	222464915	(26491507)	C	L1ME4c	LINE/L1	(101)	729	562	329166
573	5.3	0.0	0.0	chr1	222465005	222465079	(26491343)	+	tRNA-Thr-ACA	tRNA	1	75	(1)	329167
2999	8.8	1.6	2.4	chr1	222850441	222850894	(26105528)	C	L1PA14	LINE/L1	(5)	6156	5707	329798
860	34.3	8.5	3.4	chr1	223819805	223820408	(25136014)	C	L2a	LINE/L2	(0)	3426	2786	331274
1744	31.3	14.6	4.5	chr1	223826703	223827701	(25128721)	C	L2a	LINE/L2	(554)	2865	1723	331285
2799	20.1	10.2	2.0	chr1	224106414	224107053	(24849369)	C	LTR41	LTR/ERVL	(70)	698	1	331803
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
360	34.2	12.9	1.5	chr1	224317312	224317572	(24638850)	C	L2c	LINE/L2	(116)	3271	2977	332318
195	34.9	0.0	1.5	chr1	224317608	224317674	(24638748)	C	L2c	LINE/L2	(556)	2863	2798	332318
13	26.3	0.0	2.1	chr1	224708183	224708229	(24248193)	+	(CCTCT)n	Simple_repeat	1	47	(0)	333020
12	21.7	0.0	0.0	chr1	224894937	224894968	(24061454)	+	(ACAATT)n	Simple_repeat	1	32	(0)	333325
1339	28.4	13.3	5.0	chr1	224922174	224922859	(24033563)	C	LTR41B	LTR/ERVL	(6)	752	1	333369
547	23.1	8.2	8.6	chr1	225339813	225339949	(23616473)	+	L2	LINE/L2	2648	2790	(629)	333816
645	13.8	9.2	0.0	chr1	225339950	225340058	(23616364)	+	L1PB3	LINE/L1	6028	6147	(7)	333817
2140	24.2	8.4	1.8	chr1	225555934	225557216	(23399206)	C	L1ME3A	LINE/L1	(224)	5949	4561	334130
4120	17.8	1.2	3.6	chr1	225611778	225612607	(23343815)	+	L1MB5	LINE/L1	5355	6164	(10)	334228
1246	19.0	6.5	2.5	chr1	225635619	225635899	(23320523)	+	MLT1C	LTR/ERVL-MaLR	36	328	(139)	334273
1319	17.2	6.4	1.7	chr1	225635879	225636115	(23320307)	+	MLT2C2	LTR/ERVL	214	462	(2)	334274
726	25.2	14.2	5.2	chr1	225700877	225701240	(23255182)	C	MLT1L	LTR/ERVL-MaLR	(14)	596	195	334410
689	12.4	0.0	0.0	chr1	225780374	225780470	(23175952)	C	AluSq	SINE/Alu	(7)	306	210	334573
18	31.2	4.2	0.0	chr1	225780487	225780558	(23175864)	+	(TA)n	Simple_repeat	1	75	(0)	334574
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
392	34.7	11.5	0.0	chr1	226179081	226179273	(22777149)	+	MIRb	SINE/MIR	50	267	(1)	335365
298	33.3	4.6	9.4	chr1	226179313	226179471	(22776951)	C	L3	LINE/CR1	(433)	3666	3516	335364
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
2181	20.2	2.9	0.5	chr1	226776040	226776481	(22179941)	+	Tigger17a	DNA/TcMar-Tigger	7	459	(195)	336452
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
2522	18.3	4.2	0.7	chr1	228472004	228472547	(20483875)	+	MER34B	LTR/ERV1	2	565	(0)	338764
6278	15.0	2.8	0.0	chr1	228500001	228501063	(20455359)	C	Tigger1	DNA/TcMar-Tigger	(1294)	1124	31	338818
1499	23.2	6.6	8.5	chr1	228501092	228501759	(20454663)	C	MER77B	LTR/ERVL	(6)	694	41	338819
1975	14.3	14.4	2.3	chr1	228803106	228803499	(20152923)	+	LTR47A	LTR/ERVL	3	452	(0)	339217
921	28.0	3.2	4.1	chr1	229849350	229849692	(19106730)	+	Charlie13b	DNA/hAT-Charlie	27	366	(146)	341014
1185	16.6	2.3	4.1	chr1	230632358	230632577	(18323845)	C	MER20	DNA/hAT-Charlie	(3)	216	1	342176
2788	26.4	4.0	2.6	chr1	230632578	230633027	(18323395)	C	L2a	LINE/L2	(709)	2710	2261	342174
56	27.8	3.7	1.0	chr1	231216105	231216295	(17740127)	+	(TCTC)n	Simple_repeat	1	198	(0)	343119
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
316	26.1	4.3	13.6	chr1	231628268	231628422	(17328000)	+	MIRc	SINE/MIR	115	254	(14)	343836
391	27.9	11.5	5.7	chr1	231628463	231628690	(17327732)	C	MIRb	SINE/MIR	(18)	244	2	343837
5556	27.0	4.8	6.4	chr1	232126972	232129220	(16827202)	C	L1MB5	LINE/L1	(5307)	2210	1	344538
1089	26.0	1.9	1.9	chr1	232671185	232671447	(16284975)	C	L4_B_Mam	LINE/RTE-X	(887)	4054	3792	345236
2226	7.9	4.0	0.3	chr1	232671468	232671783	(16284639)	+	L1MA3	LINE/L1	5978	6305	(0)	345237
422	24.9	2.3	9.1	chr1	232950120	232950204	(16006218)	+	MER5B	DNA/hAT-Charlie	89	172	(6)	345697
2423	23.5	5.1	0.2	chr1	235018105	235018649	(13937773)	C	MLT1G	LTR/ERVL-MaLR	(2)	589	17	348843
361	32.3	10.7	2.8	chr1	235109785	235110109	(13846313)	C	Tigger10	DNA/TcMar-Tigger	(1027)	817	464	349053
1130	15.2	1.9	5.8	chr1	235253246	235253469	(13702953)	C	MER20	DNA/hAT-Charlie	(1)	218	4	349322
234	24.3	4.1	5.4	chr1	235317289	235317362	(13639060)	C	Charlie4z	DNA/hAT-Charlie	(2)	165	93	349480
1531	30.7	5.8	1.6	chr1	236137541	236138122	(12818300)	+	ERVL-E-int	LTR/ERVL	2755	3362	(2305)	351077
441	31.1	10.0	5.6	chr1	236452128	236452319	(12504103)	C	LTR78B	LTR/ERV1	(903)	393	193	351659
323	21.1	5.3	0.0	chr1	236519662	236519732	(12436690)	C	MER63A	DNA/hAT-Blackjack	(0)	210	136	351816
241	28.8	0.0	0.0	chr1	236519758	236519816	(12436606)	C	MER63A	DNA/hAT-Blackjack	(149)	61	3	351816
511	24.4	13.1	4.3	chr1	236519818	236519948	(12436474)	+	MER112	DNA/hAT-Charlie	1	154	(107)	351817
282	29.2	15.1	2.2	chr1	236868763	236868986	(12087436)	C	Charlie21a	DNA/hAT-Charlie	(873)	340	83	352384
3909	20.6	3.1	5.1	chr1	236987086	236987974	(11968448)	C	L1MB7	LINE/L1	(1)	6183	5313	352596
867	30.2	4.0	7.7	chr1	237034290	237034806	(11921616)	+	MLT1J	LTR/ERVL-MaLR	1	587	(8)	352668
2523	8.8	1.6	0.3	chr1	237152644	237153007	(11803415)	+	L1PA10	LINE/L1	4978	5346	(800)	352843
2622	20.2	5.0	5.1	chr1	237470692	237471420	(11485002)	C	LTR9A1	LTR/ERV1	(0)	728	1	353369
263	29.4	13.5	1.8	chr1	240005639	240005749	(8950673)	+	L2b	LINE/L2	3236	3361	(14)	356980
2002	29.2	6.1	4.3	chr1	240399325	240400238	(8556184)	+	L1M4b	LINE/L1	62	1221	(5646)	357573
2181	18.7	2.8	6.0	chr1	241107269	241107751	(7848671)	+	LTR24	LTR/ERV1	1	467	(0)	358751
23433	10.3	1.6	3.0	chr1	241424986	241431394	(7525028)	C	L1PA7	LINE/L1	(5)	6464	1	359284
672	17.3	1.6	5.2	chr1	241431395	241431528	(7524894)	C	L1P5	LINE/L1	(371)	5785	5657	359285
923	27.6	19.4	1.8	chr1	244838078	244838797	(4117625)	C	L2a	LINE/L2	(736)	2683	1795	364894
2148	10.3	1.7	1.0	chr1	244838798	244839087	(4117335)	C	AluSz	SINE/Alu	(20)	292	1	364895
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
1364	27.4	6.1	3.9	chr10	3789675	3790344	(130007078)	C	L1MCc	LINE/L1	(4970)	2067	1221	375564
1489	19.6	8.8	0.0	chr10	7681563	7681842	(126115580)	+	AluJo	SINE/Alu	5	311	(1)	381422
2442	8.8	0.0	0.0	chr10	8703142	8703438	(125093984)	+	AluSg	SINE/Alu	1	297	(13)	383204
232	19.1	0.0	0.0	chr10	11166256	11166297	(122631125)	+	MER135	DNA	138	179	(49)	386568
290	28.3	10.8	4.8	chr10	11605075	11605282	(122192140)	+	L1MEg	LINE/L1	96	317	(5767)	387142
214	18.8	24.5	0.0	chr10	14889445	14889524	(118907898)	C	L2b	LINE/L2	(1606)	1813	1708	393227
46	0.0	0.0	0.0	chr10	15635919	15635957	(118161465)	+	(AC)n	Simple_repeat	1	39	(0)	394595
1042	30.3	1.1	0.8	chr10	15704590	15704942	(118092480)	C	MamGypsy2-I	LTR/Gypsy	(3812)	354	1	394685
337	32.6	14.2	2.2	chr10	15861337	15861565	(117935857)	+	MIR	SINE/MIR	2	262	(0)	394904
2381	20.5	6.3	2.2	chr10	21372961	21373439	(112423983)	+	MLT1F1	LTR/ERVL-MaLR	1	509	(60)	403538
833	20.2	1.2	0.0	chr10	22817173	22817340	(110980082)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	205	405853
3167	15.6	7.5	5.4	chr10	23435357	23435911	(110361511)	C	L1MB7	LINE/L1	(116)	6068	5480	406889
180	26.6	7.1	3.7	chr10	34522759	34522840	(99274582)	C	MIRb	SINE/MIR	(82)	186	102	424847
14	26.7	2.0	0.0	chr10	34704433	34704481	(99092941)	+	(GACAGA)n	Simple_repeat	1	50	(0)	425125
423	26.0	17.9	2.7	chr10	36713052	36713344	(97084078)	+	L1ME3A	LINE/L1	1654	2000	(5333)	428448
2728	19.5	7.5	8.4	chr10	44513637	44514347	(89283075)	+	MER44D	DNA/TcMar-Tigger	1	704	(1)	434911
3728	21.4	2.0	2.8	chr10	44741469	44742377	(89055045)	+	L1MB5	LINE/L1	5264	6165	(9)	435170
2949	12.7	10.3	3.8	chr10	44966393	44966942	(88830480)	C	MER41E	LTR/ERV1	(5)	590	1	435476
484	26.5	9.0	6.3	chr10	46228457	46228694	(87568728)	+	L1M2	LINE/L1	819	1063	(5786)	437378
1311	29.0	1.6	0.3	chr10	46228702	46229067	(87568355)	+	L1PA17	LINE/L1	888	1258	(5615)	437379
334	35.0	2.8	2.1	chr10	46516804	46516946	(87280476)	+	L2c	LINE/L2	3243	3386	(1)	437787
2702	21.5	3.4	2.4	chr10	50985543	50986133	(82811289)	C	MLT1E3	LTR/ERVL-MaLR	(2)	622	26	444183
1221	21.9	10.5	0.8	chr10	59234695	59235072	(74562350)	C	LTR37A	LTR/ERV1	(0)	426	8	455263
284	29.7	2.6	0.0	chr10	59908015	59908088	(73889334)	+	UCON2	DNA?	400	475	(110)	456272
291	34.8	7.1	1.5	chr10	60820243	60820373	(72977049)	+	MIR3	SINE/MIR	46	178	(30)	457660
1636	28.0	11.1	5.1	chr10	63437923	63439064	(70358358)	+	L2a	LINE/L2	2199	3426	(0)	461786
852	16.5	18.1	2.8	chr10	63531293	63531473	(70265949)	C	MER20	DNA/hAT-Charlie	(4)	215	1	461954
3068	4.0	0.0	0.5	chr10	67836007	67836380	(65961042)	+	L1PA8	LINE/L1	5801	6172	(0)	468001
4789	5.0	0.3	2.3	chr10	68720580	68720874	(65076548)	+	L1PA5	LINE/L1	5867	6153	(1)	469957
893	25.4	7.5	2.2	chr10	69786821	69787098	(64010324)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	300	472260
592	24.2	1.6	0.0	chr10	69787105	69787224	(64010198)	+	FLAM_A	SINE/Alu	10	131	(11)	472261
484	19.7	13.0	3.3	chr10	70459300	70459451	(63337971)	+	Arthur1A	DNA/hAT-Tip100	1	169	(8)	473512
766	32.5	16.3	2.6	chr10	70459898	70460773	(63336649)	+	L2b	LINE/L2	1881	2910	(509)	473513
438	26.3	4.4	1.9	chr10	71211803	71211957	(62585465)	C	MIR	SINE/MIR	(59)	203	45	474801
225	24.2	29.6	1.3	chr10	71595004	71595162	(62202260)	+	MIRb	SINE/MIR	31	253	(15)	475566
221	27.6	2.3	7.3	chr10	71595258	71595394	(62202028)	+	L2c	LINE/L2	3036	3165	(222)	475567
223	31.1	0.0	1.3	chr10	72355122	72355196	(61442226)	C	MIR3	SINE/MIR	(33)	175	102	477094
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
11472	24.1	6.5	4.3	chr10	74717519	74718915	(59078507)	C	L1MA8	LINE/L1	(3785)	2941	1408	481666
399	30.4	6.7	9.2	chr10	75292803	75293183	(58504239)	C	MLT1O	LTR/ERVL-MaLR	(158)	384	14	482838
19	0.0	0.0	0.0	chr10	76547495	76547518	(57249904)	+	(ATTT)n	Simple_repeat	1	24	(0)	484646
1130	27.1	5.3	10.4	chr10	77663605	77663922	(56133500)	C	L1MC5a	LINE/L1	(2217)	560	272	486357
2199	8.0	5.3	0.3	chr10	79467252	79467537	(54329885)	+	AluSx	SINE/Alu	1	301	(11)	489690
567	28.3	6.7	1.6	chr10	86712460	86712642	(47084780)	+	MIRb	SINE/MIR	28	220	(48)	499991
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
278	29.1	2.5	0.0	chr10	88078173	88078251	(45719171)	+	UCON55	DNA/TcMar-Tigger	41	121	(71)	502286
276	32.1	5.1	6.1	chr10	89177558	89177836	(44619586)	+	L2-3_Crp	LINE/L2	709	984	(1112)	503992
5869	18.6	3.0	1.7	chr10	90136346	90138172	(43659250)	+	HUERS-P3b-int	LTR/ERV1	747	2884	(6035)	505432
695	20.2	7.9	2.0	chr10	92181641	92181842	(41615580)	+	MER58C	DNA/hAT-Charlie	1	215	(0)	508520
258	31.0	1.0	2.0	chr10	92387543	92387644	(41409778)	C	MER5B	DNA/hAT-Charlie	(0)	178	78	509002
3825	17.2	6.8	3.8	chr10	96124232	96125093	(37672329)	C	L1M4c	LINE/L1	(5493)	2074	1186	515430
40	0.0	2.4	2.3	chr10	96229655	96229696	(37567726)	+	(TG)n	Simple_repeat	1	43	(0)	515592
257	31.2	20.9	0.6	chr10	98134109	98134440	(35662982)	C	L2a	LINE/L2	(1177)	2242	1826	519432
1571	8.6	3.9	0.5	chr10	99856557	99856778	(33940644)	C	MER30	DNA/hAT-Charlie	(0)	230	1	522217
180	32.2	18.3	2.6	chr10	100342669	100342824	(33454598)	+	L2c	LINE/L2	3018	3203	(184)	523181
296	33.5	5.6	3.2	chr10	100524718	100524874	(33272548)	+	L2	LINE/L2	2740	2900	(519)	523499
365	18.4	0.0	5.0	chr10	100524861	100524940	(33272482)	+	L2a	LINE/L2	3348	3423	(3)	523500
706	30.7	3.0	2.2	chr10	101596290	101596532	(32200890)	C	MIRb	SINE/MIR	(18)	250	8	525345
454	15.9	0.0	2.2	chr10	102645596	102645685	(31151737)	+	UCON4	Unknown	66	153	(150)	527310
710	24.4	11.8	3.7	chr10	102856063	102856122	(30941300)	C	L2a	LINE/L2	(237)	3189	3126	527724
1655	24.9	3.9	8.1	chr10	102856126	102856270	(30941152)	+	Tigger13a	DNA/TcMar-Tigger	75	212	(559)	527726
913	13.6	2.2	0.0	chr10	102856271	102856402	(30941020)	+	FLAM_C	SINE/Alu	1	135	(8)	527727
2215	17.3	3.4	1.2	chr10	102964789	102965187	(30832235)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	527960
1333	21.4	0.0	0.4	chr10	109956577	109956801	(23840621)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	538672
873	20.6	5.7	9.8	chr10	109956815	109957088	(23840334)	+	MLT1K	LTR/ERVL-MaLR	332	593	(2)	538663
581	29.3	10.8	7.3	chr10	110338005	110338122	(23459300)	+	L2	LINE/L2	1655	1771	(1648)	539290
1803	14.2	18.2	0.0	chr10	110338123	110338446	(23458976)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	539291
408	32.7	4.6	0.6	chr10	110652601	110652766	(23144656)	C	MIR3	SINE/MIR	(27)	181	9	539932
19545	19.2	3.5	2.6	chr10	116653175	116655283	(17142139)	C	L1PA16	LINE/L1	(3974)	2811	288	549136
574	26.0	7.5	2.9	chr10	119521671	119521956	(14275466)	+	HAL1	LINE/L1	1478	1710	(797)	554049
228	22.4	1.7	1.7	chr10	119522005	119522063	(14275359)	+	HAL1	LINE/L1	1705	1763	(744)	554049
230	37.6	3.4	1.1	chr10	121043642	121043816	(12753606)	+	OldhAT1	DNA/hAT-Ac	831	1009	(1839)	556548
434	29.7	13.1	3.4	chr10	122703958	122704225	(11093197)	+	L4_A_Mam	LINE/RTE-X	37	334	(4656)	559221
27	6.1	0.0	0.0	chr10	125470221	125470255	(8327167)	+	(GA)n	Simple_repeat	1	35	(0)	563572
18	24.5	0.0	4.8	chr10	130136409	130136471	(3660951)	+	(GGC)n	Simple_repeat	1	63	(0)	569159
350	29.2	5.0	2.3	chr10	132541610	132541784	(1255638)	C	Charlie1	DNA/hAT-Charlie	(2558)	223	44	571761
14	16.4	2.9	0.0	chr11	842514	842547	(134244075)	+	(CGGCC)n	Simple_repeat	1	35	(0)	574012
2062	11.6	3.3	0.0	chr11	9267398	9267689	(125818933)	+	AluSc	SINE/Alu	2	303	(6)	585338
342	29.2	5.1	7.4	chr11	9267696	9267965	(125818657)	C	L2b	LINE/L2	(191)	3196	2923	585339
2423	17.4	3.0	5.1	chr11	14976219	14976787	(120109835)	+	L1MA9	LINE/L1	5712	6268	(44)	594773
13	8.1	0.0	6.7	chr11	31645862	31645891	(103440731)	+	(CCACC)n	Simple_repeat	1	30	(0)	620255
1134	22.3	7.6	6.3	chr11	32558832	32559225	(102527397)	C	MLT1C	LTR/ERVL-MaLR	(52)	415	5	621848
1620	23.4	9.5	0.2	chr11	32559229	32559687	(102526935)	+	LTR67B	LTR/ERVL	115	620	(0)	621847
15	4.7	0.0	0.0	chr11	43358854	43358875	(91727747)	+	(CTC)n	Simple_repeat	1	22	(0)	638336
671	27.9	10.9	7.7	chr11	43649596	43650154	(91436468)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	638780
227	28.7	19.2	2.4	chr11	46383146	46383270	(88703352)	C	MIRc	SINE/MIR	(84)	184	34	643867
2148	9.5	1.0	1.0	chr11	47767753	47768046	(87318576)	+	AluSg4	SINE/Alu	2	295	(15)	646697
248	26.0	11.0	0.0	chr11	57493824	57493896	(77592726)	+	MIRc	SINE/MIR	117	198	(70)	653826
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
449	29.2	5.5	4.7	chr11	58524847	58525101	(76561521)	C	MARNA	DNA/TcMar-Mariner	(75)	511	255	655615
670	1.4	0.0	0.0	chr11	59550986	59551059	(75535563)	C	tRNA-Val-GTA	tRNA	(2)	74	1	656946
2176	14.4	4.9	0.5	chr11	63024344	63024756	(72061866)	+	L1MB4	LINE/L1	5748	6179	(1)	663332
274	24.0	5.0	0.0	chr11	65418923	65419018	(69667604)	C	L2a	LINE/L2	(262)	3164	3064	667508
230	34.5	9.6	0.0	chr11	65487241	65487382	(69599240)	C	MIRc	SINE/MIR	(22)	246	90	667647
1248	26.4	5.7	7.1	chr11	66100563	66101107	(68985515)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	1	668829
2097	24.4	5.7	0.0	chr11	73636986	73637464	(61449158)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	5	682298
34	2.8	0.0	0.0	chr11	75815232	75815268	(59271354)	+	(CAGCGGCGG)n	Simple_repeat	1	37	(0)	686819
441	23.0	4.0	0.4	chr11	76152167	76152293	(58934329)	C	MIRc	SINE/MIR	(121)	147	11	687418
308	29.6	4.7	7.2	chr11	87173449	87173601	(47913021)	+	MIRb	SINE/MIR	86	234	(34)	706750
1318	20.6	23.3	1.7	chr11	93921793	93922353	(41164269)	+	LTR50	LTR/ERVL	32	759	(36)	716410
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
637	20.4	6.8	2.7	chr11	111429015	111429194	(23657428)	C	L1MB4	LINE/L1	(0)	6180	6006	741365
688	15.3	2.2	3.0	chr11	111429218	111429352	(23657270)	C	LTR41B	LTR/ERVL	(623)	135	2	741366
614	30.7	16.2	5.5	chr11	111879628	111880047	(23206575)	C	L2c	LINE/L2	(4)	3383	2910	742120
805	22.5	7.6	2.5	chr11	118311006	118311242	(16775380)	C	MIRb	SINE/MIR	(16)	252	3	752677
184	23.7	0.0	0.0	chr11	118400583	118400620	(16686002)	+	MIR	SINE/MIR	53	90	(172)	752840
5941	18.5	6.2	14.5	chr11	132027348	132029191	(3057431)	C	L1MCa	LINE/L1	(4733)	1775	101	774137
1935	19.2	20.3	5.0	chr12	1747424	1748239	(131527070)	C	L1M4b	LINE/L1	(4378)	2489	1546	781208
967	34.2	5.4	4.2	chr12	1761733	1762480	(131512829)	+	L2a	LINE/L2	2658	3422	(4)	781237
386	37.4	9.1	1.2	chr12	1977288	1977531	(131297778)	+	Tigger19b	DNA/TcMar-Tigger	219	483	(67)	781509
347	27.9	6.7	7.3	chr12	2877738	2877898	(130397411)	C	L2b	LINE/L2	(0)	3387	3225	782824
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
184	25.8	12.6	5.8	chr12	6961488	6961590	(126313719)	+	MIRb	SINE/MIR	125	235	(33)	789702
3994	14.0	2.3	0.5	chr12	10360930	10361561	(122913748)	C	LTR9B	LTR/ERV1	(0)	644	1	795146
1144	28.6	5.5	1.9	chr12	11487872	11488242	(121787067)	C	MLT1J	LTR/ERVL-MaLR	(113)	399	15	796544
2241	14.1	9.9	1.7	chr12	12626902	12627365	(120647944)	+	L1MC2	LINE/L1	5814	6344	(0)	798469
1299	13.6	1.8	2.7	chr12	12720612	12720831	(120554478)	C	MER20	DNA/hAT-Charlie	(1)	218	1	798631
987	25.7	10.6	3.3	chr12	12779485	12779903	(120495406)	+	L1ME4c	LINE/L1	284	736	(94)	798764
724	26.4	8.7	12.5	chr12	13361977	13362704	(119912605)	C	LTR41C	LTR/ERVL	(3)	698	1	799754
5038	11.5	7.7	0.3	chr12	15688314	15689073	(117586236)	+	LTR1A2	LTR/ERV1	17	837	(0)	803141
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
1326	22.9	6.1	4.2	chr12	22048373	22048879	(111226430)	+	MER67B	LTR/ERV1	1	405	(306)	811569
943	15.6	0.0	16.5	chr12	27435137	27435397	(105839912)	C	MER20	DNA/hAT-Charlie	(0)	219	2	819546
932	18.8	8.0	12.1	chr12	29552157	29552495	(103722814)	+	MER33	DNA/hAT-Charlie	1	324	(0)	822516
433	33.7	4.1	0.0	chr12	29552537	29552699	(103722610)	+	MIR	SINE/MIR	2	171	(91)	822517
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
715	24.1	4.5	5.5	chr12	32987460	32987999	(100287310)	C	MER67C	LTR/ERV1	(0)	543	59	828480
13	28.4	0.0	0.0	chr12	34218502	34218544	(99056765)	+	A-rich	Low_complexity	1	43	(0)	829925
10170	17.1	8.1	1.6	chr12	39278117	39279774	(93995535)	+	L1MCa	LINE/L1	85	1834	(4674)	832187
284	30.7	2.6	0.0	chr12	39284307	39284420	(93990889)	C	MLT1J	LTR/ERVL-MaLR	(8)	602	486	832193
846	20.0	6.5	3.9	chr12	40011163	40011370	(93263939)	C	MER20	DNA/hAT-Charlie	(0)	219	6	833172
873	20.4	1.7	3.4	chr12	40325424	40325601	(92949708)	C	MER20	DNA/hAT-Charlie	(2)	217	43	833642
1798	17.8	3.3	0.3	chr12	42094079	42094370	(91180939)	+	AluJb	SINE/Alu	1	301	(11)	835989
1569	21.2	0.7	1.0	chr12	42094376	42094672	(91180637)	+	AluJo	SINE/Alu	1	296	(16)	835990
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
552	27.9	12.0	2.5	chr12	47071485	47071709	(86203600)	+	MIRb	SINE/MIR	9	245	(23)	843071
37	8.0	0.0	0.0	chr12	47904085	47904137	(85371172)	+	(GAG)n	Simple_repeat	1	53	(0)	844399
589	13.0	1.1	0.0	chr12	49132856	49132947	(84142362)	C	HY4	scRNA	(0)	93	1	846447
189	31.4	17.3	4.6	chr12	49133086	49133215	(84142094)	C	MamSINE1	SINE/tRNA-RTE	(49)	241	92	846448
378	20.0	6.8	6.6	chr12	51954639	51954789	(81320520)	+	MIRc	SINE/MIR	37	181	(81)	852210
5976	19.6	4.4	2.4	chr12	52505880	52507711	(80767598)	C	L1MC1	LINE/L1	(4385)	2032	1	853027
359	31.7	15.0	2.9	chr12	53274228	53274601	(80000708)	C	L2a	LINE/L2	(529)	2890	2464	854390
1532	15.9	2.7	2.7	chr12	53391652	53391949	(79883360)	C	L1PA16	LINE/L1	(61)	6105	5808	854650
440	28.1	8.2	0.7	chr12	53601418	53601553	(79673756)	+	UCON62	DNA?	1	147	(30)	855057
1348	10.0	0.0	0.0	chr12	54229470	54229639	(79045670)	+	AluSx1	SINE/Alu	134	303	(9)	856086
2161	9.4	0.0	8.5	chr12	54288509	54288641	(78986668)	+	AluSx3	SINE/Alu	1	131	(180)	856177
14	16.9	3.0	0.0	chr12	55927235	55927267	(77348042)	+	GA-rich	Low_complexity	1	34	(0)	858553
90	1.2	0.0	1.1	chr12	56116142	56116229	(77159080)	+	(AAAG)n	Simple_repeat	1	88	(0)	858936
2306	9.4	0.3	1.3	chr12	56757336	56757644	(76517665)	+	AluSx3	SINE/Alu	1	306	(5)	860197
804	31.8	1.9	2.6	chr12	65606635	65606902	(67668407)	+	MIRb	SINE/MIR	3	268	(0)	873035
462	30.4	10.0	7.0	chr12	67665535	67666150	(65609159)	C	L2a	LINE/L2	(3)	3423	2721	876233
355	28.7	9.9	0.7	chr12	69070303	69070439	(64204870)	+	MER5A	DNA/hAT-Charlie	36	186	(3)	878618
869	16.0	0.8	0.0	chr12	69502403	69502533	(63772776)	C	FLAM_C	SINE/Alu	(11)	132	1	879412
440	26.9	12.5	2.7	chr12	69502559	69502745	(63772564)	C	L2a	LINE/L2	(6)	3420	3213	879413
257	24.1	2.5	0.0	chr12	70074491	70074569	(63200740)	C	MER74A	LTR/ERVL	(0)	622	542	880342
1765	19.9	9.8	0.8	chr12	70074579	70074977	(63200332)	C	MER74A	LTR/ERVL	(119)	439	1	880342
7730	7.3	12.1	0.2	chr12	74687600	74688684	(58586625)	C	MER11B	LTR/ERVK	(4)	1232	1	886530
1772	21.5	13.1	4.2	chr12	79891562	79892066	(53383243)	+	MLT1F2	LTR/ERVL-MaLR	1	557	(3)	894208
521	32.5	5.6	5.3	chr12	88448540	88448822	(44826487)	C	MamRTE1	LINE/RTE-BovB	(261)	3551	3268	905522
7444	12.1	2.6	1.1	chr12	89172003	89173147	(44102162)	C	HSMAR2	DNA/TcMar-Mariner	(139)	1163	2	906588
851	23.0	12.8	2.6	chr12	92080774	92081081	(41194228)	C	L2a	LINE/L2	(14)	3412	3069	910887
603	29.9	7.7	1.4	chr12	93185497	93185703	(40089606)	C	MIRb	SINE/MIR	(29)	239	19	912899
574	30.9	8.6	8.8	chr12	93888441	93889103	(39386206)	C	L2c	LINE/L2	(468)	2951	2298	914282
2192	11.0	0.3	0.7	chr12	95103545	95103835	(38171474)	C	AluSx	SINE/Alu	(22)	290	1	916509
326	31.7	9.3	2.8	chr12	98901174	98901384	(34373925)	C	L2c	LINE/L2	(960)	2459	2234	923090
190	32.7	11.4	1.0	chr12	99897742	99897843	(33377466)	C	L2c	LINE/L2	(233)	3154	3041	924517
1492	12.0	0.0	2.3	chr12	101699085	101699301	(31576008)	C	AluSx	SINE/Alu	(14)	298	87	927782
2455	18.8	10.4	0.4	chr12	103925325	103925810	(29349499)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	931549
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
846	13.3	8.3	3.4	chr12	104527055	104527202	(28748107)	+	MLT1B	LTR/ERVL-MaLR	1	156	(234)	932764
5224	21.6	9.8	5.0	chr12	106217599	106218687	(27056622)	C	L1MEc	LINE/L1	(4615)	1800	505	935829
498	28.5	9.3	0.6	chr12	107402315	107402480	(25872829)	+	MIRb	SINE/MIR	21	202	(66)	938061
1600	13.1	0.0	0.0	chr12	108532757	108532977	(24742332)	C	AluSq2	SINE/Alu	(16)	297	77	940483
2296	9.2	0.0	5.5	chr12	109354322	109354648	(23920661)	+	AluSc8	SINE/Alu	2	310	(1)	942356
2351	8.9	0.3	0.0	chr12	109853410	109853702	(23421607)	+	AluSx4	SINE/Alu	2	295	(15)	943485
764	22.7	13.4	5.1	chr12	110102154	110102548	(23172761)	C	MLT1L	LTR/ERVL-MaLR	(29)	581	149	944033
1280	19.3	4.6	5.5	chr12	111277789	111278089	(21997220)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	220	946690
824	23.3	1.2	0.0	chr12	111769281	111769439	(21505870)	+	FRAM	SINE/Alu	10	170	(6)	947857
239	31.4	8.8	4.8	chr12	111769462	111769712	(21505597)	C	L1ME3G	LINE/L1	(125)	799	538	947858
316	30.0	0.0	0.0	chr12	116243622	116243701	(17031608)	C	MamSINE1	SINE/tRNA-RTE	(124)	166	87	957576
384	30.6	3.6	2.9	chr12	116243733	116243870	(17031439)	+	MIRc	SINE/MIR	8	146	(122)	957577
1262	25.9	18.0	2.2	chr12	116918348	116918837	(16356472)	C	MLT1K	LTR/ERVL-MaLR	(8)	587	4	959291
263	28.8	4.1	2.5	chr12	116958650	116958770	(16316539)	C	L2c	LINE/L2	(178)	3209	3087	959343
5323	21.1	10.8	9.5	chr12	120795246	120796093	(12479216)	C	L1MEc	LINE/L1	(4041)	1897	1009	967874
12	28.7	0.0	0.0	chr12	121580126	121580167	(11695142)	+	A-rich	Low_complexity	1	42	(0)	969720
375	23.0	28.2	2.8	chr12	121664113	121664293	(11611016)	+	MLT1K	LTR/ERVL-MaLR	368	594	(1)	969981
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
188	35.2	7.4	7.4	chr12	122413660	122413754	(10861555)	+	L3b	LINE/CR1	5018	5112	(120)	971745
11012	9.0	3.9	0.6	chr12	123249828	123251861	(10023448)	C	L1PBa1	LINE/L1	(4515)	2348	252	973619
431	32.8	11.5	1.4	chr12	124843959	124844246	(8431063)	+	L1ME5	LINE/L1	5542	5862	(332)	976957
26	0.0	0.0	5.9	chr12	124863979	124864012	(8411297)	+	(CGGGG)n	Simple_repeat	1	34	(0)	976997
20	28.9	4.9	3.1	chr12	124864161	124864282	(8411027)	+	(CCTCCT)n	Simple_repeat	1	128	(0)	976998
1145	18.2	2.3	5.3	chr12	124916858	124917083	(8358226)	+	MER20	DNA/hAT-Charlie	1	219	(0)	977141
2029	14.7	0.0	0.7	chr12	124923216	124923522	(8351787)	+	AluSz	SINE/Alu	1	305	(7)	977155
1847	26.9	9.9	1.3	chr12	124992683	124993439	(8281870)	C	L1MC5a	LINE/L1	(325)	2452	1624	977331
814	28.4	10.1	3.5	chr13	23707901	23708086	(90656242)	+	L2a	LINE/L2	3027	3248	(178)	999217
6108	8.8	2.5	1.8	chr13	27125487	27126431	(87237897)	+	L1P2	LINE/L1	5	956	(5228)	1004359
606	24.4	1.2	3.0	chr13	27770891	27771059	(86593269)	C	MIRb	SINE/MIR	(74)	194	29	1005485
844	23.2	11.4	6.0	chr13	28297390	28297885	(86066443)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	9	1006515
13044	18.0	4.4	2.8	chr13	29800772	29804771	(84559557)	+	L1PREC2	LINE/L1	1386	5457	(2684)	1008648
977	21.6	5.1	8.2	chr13	31532734	31532860	(82831468)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	269	1011464
2307	20.7	12.4	6.3	chr13	31532861	31533540	(82830788)	+	LTR8A	LTR/ERV1	1	727	(0)	1011465
364	30.5	6.8	3.8	chr13	33762078	33762234	(80602094)	C	MIRb	SINE/MIR	(0)	268	107	1014777
503	23.5	15.4	6.5	chr13	40311390	40311589	(74052739)	+	MIR	SINE/MIR	39	259	(3)	1023898
226	29.6	9.4	0.9	chr13	42283853	42283968	(72080360)	C	L1ME4a	LINE/L1	(298)	5826	5700	1027125
13	13.2	0.0	0.0	chr13	44576031	44576055	(69788273)	+	(GCG)n	Simple_repeat	1	25	(0)	1030512
399	35.4	5.9	5.9	chr13	47774047	47774361	(66589967)	+	MamGypLTR3	LTR/Gypsy	334	652	(242)	1035734
17016	12.4	2.2	2.6	chr13	57784177	57788027	(56576301)	C	L1PA10	LINE/L1	(2629)	3832	10	1049979
996	18.7	4.0	0.5	chr13	98326301	98326520	(16037808)	C	L1MB2	LINE/L1	(0)	6171	5944	1104495
432	24.5	18.4	0.5	chr13	100100053	100100253	(14264075)	C	MIRc	SINE/MIR	(13)	255	11	1107403
10259	16.7	5.3	3.3	chr13	102811823	102813205	(11551123)	C	L1M4c	LINE/L1	(4943)	1907	468	1111309
18	12.2	0.0	0.0	chr13	106532057	106532083	(7832245)	+	(A)n	Simple_repeat	1	27	(0)	1116196
1193	26.0	5.6	2.8	chr13	108226199	108226594	(6137734)	+	LTR87	LTR/ERVL?	217	624	(0)	1118479
4354	11.5	1.1	0.5	chr14	21308566	21309205	(85734513)	C	LTR9B	LTR/ERV1	(0)	644	1	1129498
294	26.4	7.8	3.6	chr14	23469077	23469186	(83574532)	C	MIR3	SINE/MIR	(49)	159	45	1132899
1934	21.6	11.7	2.1	chr14	30577336	30577821	(76465897)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	31	1142009
3927	13.3	2.5	5.3	chr14	31933734	31934420	(75109298)	C	L1MA9	LINE/L1	(522)	5790	5107	1144398
310	29.6	3.4	0.0	chr14	32225143	32225284	(74818434)	C	X6A_LINE	LINE/CR1	(13)	1067	921	1144866
411	31.4	3.8	0.0	chr14	32498198	32498299	(74545419)	+	MamRep1894	DNA/hAT	18	123	(0)	1145222
510	29.3	8.8	6.5	chr14	33945348	33945657	(73098061)	+	MLT1O	LTR/ERVL-MaLR	71	388	(154)	1146937
351	18.8	10.4	0.0	chr14	35400529	35400597	(71643121)	C	L1PB4	LINE/L1	(18)	6138	6062	1149962
383	23.4	14.6	6.0	chr14	36067574	36067857	(70975861)	+	MLT1G	LTR/ERVL-MaLR	236	540	(8)	1151103
262	27.5	13.0	1.8	chr14	36764211	36764373	(70279345)	+	LTR88b	LTR/Gypsy?	111	294	(543)	1152026
437	31.7	5.8	0.6	chr14	50832067	50832231	(56211487)	C	MIRb	SINE/MIR	(43)	225	52	1170532
1165	15.1	3.2	2.8	chr14	54503574	54503791	(52539927)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1176023
460	28.8	27.1	2.5	chr14	56170485	56170637	(50873081)	+	MIRb	SINE/MIR	9	245	(17)	1178878
2223	23.8	4.2	2.6	chr14	66642089	66642704	(40401014)	+	MLT1E2	LTR/ERVL-MaLR	1	626	(1)	1194874
510	32.9	2.7	3.3	chr14	81509660	81509958	(25533760)	+	L1ME3G	LINE/L1	228	524	(400)	1220749
794	27.7	24.5	1.8	chr14	81510008	81510455	(25533263)	C	L2a	LINE/L2	(1126)	2293	1740	1220744
1193	16.7	1.4	0.5	chr14	89767861	89768077	(17275641)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1232690
272	25.7	7.1	1.9	chr14	90399672	90399778	(16643940)	+	AmnSINE1	SINE/5S-Deu-L2	117	229	(346)	1233839
706	27.9	13.3	7.1	chr14	90519144	90519667	(16524051)	+	MLT1L	LTR/ERVL-MaLR	37	598	(12)	1234083
7197	8.4	13.8	2.2	chr14	91239733	91240822	(15802896)	C	MER11B	LTR/ERVK	(0)	1236	1	1235376
343	26.7	10.4	1.0	chr14	91380456	91380671	(15663047)	C	L1MC5a	LINE/L1	(158)	2619	2521	1235597
3475	13.4	5.9	4.8	chr14	92759124	92759728	(14283990)	C	LTR9	LTR/ERV1	(0)	612	1	1238183
259	25.8	19.3	3.7	chr14	95183762	95183919	(11859799)	+	MIR	SINE/MIR	17	202	(66)	1242555
615	29.7	14.1	2.4	chr14	99802137	99802840	(7240878)	C	L2	LINE/L2	(339)	3080	2281	1250655
32	17.2	3.3	4.2	chr14	100240046	100240137	(6803581)	+	(GGC)n	Simple_repeat	1	95	(0)	1251506
755	30.6	6.3	8.2	chr14	100578442	100578856	(6464862)	+	MLT1J	LTR/ERVL-MaLR	2	411	(101)	1252081
32	2.4	0.0	6.2	chr14	102438215	102438262	(4605456)	+	(CCCGCT)n	Simple_repeat	1	48	(0)	1254928
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
339	26.0	0.8	5.2	chr15	40225973	40226106	(61765083)	+	HAL1ME	LINE/L1	2332	2459	(6)	1290887
729	1.2	0.0	0.0	chr15	40593825	40593906	(61397283)	C	tRNA-Ser-AGY	tRNA	(3)	82	1	1291509
1025	15.8	1.8	1.2	chr15	40765435	40765599	(61225590)	C	FRAM	SINE/Alu	(10)	166	1	1291886
919	16.3	4.5	0.0	chr15	40892057	40892203	(61098986)	+	FRAM	SINE/Alu	1	154	(22)	1292162
582	26.9	5.6	6.1	chr15	41684023	41684236	(60306953)	+	L2c	LINE/L2	3171	3383	(4)	1293910
1439	28.4	4.6	1.8	chr15	42066466	42066851	(59924338)	C	MER90a	LTR/ERV1	(120)	494	94	1294505
15	25.2	1.7	3.3	chr15	42737122	42737181	(59254008)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1295667
18	4.7	0.0	0.0	chr15	43510503	43510524	(58480665)	+	(A)n	Simple_repeat	1	22	(0)	1297148
15	25.1	3.5	1.7	chr15	43510525	43510558	(58480631)	+	(ACAA)n	Simple_repeat	3	60	(0)	1297149
1519	22.0	9.5	4.3	chr15	45458161	45458697	(56532492)	+	L1ME3A	LINE/L1	5413	5980	(193)	1300698
36	0.0	0.0	0.0	chr15	48250677	48250707	(53740482)	+	(CA)n	Simple_repeat	1	31	(0)	1304548
2660	6.7	0.0	0.0	chr15	50885579	50885876	(51105313)	+	AluSc5	SINE/Alu	1	298	(11)	1308719
1692	18.5	1.3	3.5	chr15	52558170	52558488	(49432701)	+	AluJb	SINE/Alu	1	312	(0)	1311500
202	27.5	8.1	2.4	chr15	55800010	55800091	(46191098)	C	MIR3	SINE/MIR	(21)	187	101	1316225
1208	23.0	13.8	5.2	chr15	56018072	56018393	(45972796)	+	MER34C2	LTR/ERV1	1	364	(423)	1316576
1425	23.3	18.4	0.4	chr15	56215714	56216179	(45775010)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	1316854
215	32.5	0.0	6.1	chr15	59843009	59843090	(42148099)	+	L2c	LINE/L2	3311	3387	(0)	1322832
326	36.0	0.0	0.0	chr15	59843103	59843216	(42147973)	+	MIR3	SINE/MIR	37	150	(58)	1322838
241	28.2	4.9	3.7	chr15	60606208	60606288	(41384901)	+	L2c	LINE/L2	3306	3387	(0)	1324055
44	13.7	1.6	8.5	chr15	65319137	65319247	(36671942)	+	(TCT)n	Simple_repeat	1	103	(0)	1332389
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
186	26.9	6.9	0.0	chr15	66586282	66586348	(35404841)	C	L2b	LINE/L2	(64)	3311	3240	1335008
521	29.1	7.9	0.6	chr15	67736876	67737051	(34254138)	C	MIR3	SINE/MIR	(3)	205	16	1337077
203	33.6	6.6	2.6	chr15	67841097	67841212	(34149977)	C	L2c	LINE/L2	(1)	3386	3266	1337206
13	28.5	1.3	6.6	chr15	68819904	68819978	(33171211)	+	GA-rich	Low_complexity	1	76	(0)	1339120
17	4.9	0.0	0.0	chr15	70096656	70096676	(31894513)	+	(CA)n	Simple_repeat	1	21	(0)	1341461
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
1231	9.4	0.5	3.5	chr15	70111004	70111201	(31879988)	+	MER53	DNA/hAT	1	192	(1)	1341485
624	27.4	7.4	7.4	chr15	70111202	70111243	(31879946)	+	LTR16A	LTR/ERVL	409	451	(0)	1341484
1071	29.2	4.7	6.8	chr15	70148471	70148857	(31842332)	C	MLT1O	LTR/ERVL-MaLR	(125)	417	52	1341564
571	23.9	5.8	3.0	chr15	70179450	70179617	(31811572)	C	MIRc	SINE/MIR	(71)	197	25	1341641
464	30.6	13.8	3.6	chr15	70582287	70582859	(31408330)	C	L2a	LINE/L2	(87)	3300	2655	1342420
1424	16.6	5.8	0.0	chr15	70758889	70759117	(31232072)	C	AluJb	SINE/Alu	(12)	300	58	1342687
795	27.4	7.6	0.4	chr15	71252634	71252864	(30738325)	+	MIR	SINE/MIR	6	254	(8)	1343443
891	30.8	12.4	7.5	chr15	72057401	72057934	(29933255)	+	MLT1K	LTR/ERVL-MaLR	21	584	(11)	1344826
462	24.2	11.5	5.6	chr15	72968363	72968664	(29022525)	C	Tigger16a	DNA/TcMar-Tigger	(100)	857	536	1346389
27	8.1	0.0	2.4	chr15	73560618	73560658	(28430531)	+	(AT)n	Simple_repeat	1	41	(0)	1347326
2201	26.6	7.9	9.4	chr15	73647518	73648269	(28342920)	C	L1MEc	LINE/L1	(5491)	909	93	1347457
1155	24.6	11.7	2.4	chr15	73650647	73651025	(28340164)	+	MLT1L	LTR/ERVL-MaLR	144	562	(48)	1347472
1441	19.4	11.9	4.2	chr15	73654580	73655098	(28336091)	+	MER34A1	LTR/ERV1	11	568	(19)	1347480
1268	24.3	11.3	5.9	chr15	74490026	74490757	(27500432)	+	L2a	LINE/L2	2645	3426	(0)	1348922
309	29.2	9.0	0.6	chr15	75920065	75920226	(26070963)	+	Tigger10	DNA/TcMar-Tigger	393	569	(1275)	1351743
877	24.0	7.8	11.9	chr15	76863638	76864108	(25127081)	+	MLT1G3	LTR/ERVL-MaLR	1	440	(115)	1353131
336	27.4	3.3	2.5	chr15	78319470	78319589	(23671600)	C	MIR1_Amn	SINE/MIR	(60)	170	50	1355636
229	18.6	0.0	8.5	chr15	78577539	78577585	(23413604)	C	L4_C_Mam	LINE/RTE-X	(4)	5134	5092	1356214
2060	12.4	2.4	0.3	chr15	78577651	78577941	(23413248)	+	AluJb	SINE/Alu	1	297	(15)	1356215
1519	22.2	11.3	17.3	chr15	79156403	79157049	(22834140)	C	MLT2F	LTR/ERVL	(57)	606	4	1357348
16	4.5	0.0	0.0	chr15	80989715	80989737	(21001452)	+	(AGC)n	Simple_repeat	1	23	(0)	1360490
341	24.3	8.9	6.0	chr15	82139720	82139903	(19851286)	C	L1ME3G	LINE/L1	(3)	921	732	1362430
476	27.7	8.6	4.9	chr15	84653768	84653991	(17337198)	+	MIRb	SINE/MIR	8	240	(28)	1366350
216	30.2	14.2	4.8	chr15	85614192	85614337	(16376852)	+	L3	LINE/CR1	3693	3854	(245)	1368073
416	27.0	10.0	12.4	chr15	89739914	89740171	(12251018)	+	MIR	SINE/MIR	8	258	(4)	1374787
1920	10.7	4.6	0.0	chr15	90098562	90098831	(11892358)	C	AluSx1	SINE/Alu	(29)	283	1	1375597
265	33.2	6.6	2.3	chr15	90106709	90106924	(11884265)	C	L2	LINE/L2	(723)	2696	2471	1375610
18	0.0	0.0	0.0	chr15	92906665	92906684	(9084505)	+	(T)n	Simple_repeat	1	20	(0)	1380715
2704	12.1	7.6	2.8	chr16	4244304	4244803	(86093542)	+	LTR9	LTR/ERV1	1	526	(86)	1400737
2350	19.1	3.3	8.3	chr16	4566146	4567271	(85771074)	C	L1M4	LINE/L1	(2647)	3499	2915	1401418
316	21.6	8.6	0.0	chr16	8752299	8752372	(81585973)	+	MIRb	SINE/MIR	20	100	(168)	1409778
14	10.9	5.0	9.5	chr16	8963818	8963877	(81374468)	+	(TCGGCG)n	Simple_repeat	1	63	(0)	1410168
32	16.0	7.9	1.8	chr16	8963924	8964025	(81374320)	+	(CGCGGAG)n	Simple_repeat	1	108	(0)	1410169
21	22.1	5.3	1.3	chr16	9092842	9092916	(81245429)	+	(TTCT)n	Simple_repeat	1	79	(0)	1410577
401	30.8	5.4	4.1	chr16	14070771	14070990	(76267355)	+	MIRb	SINE/MIR	15	237	(31)	1421470
336	24.8	5.5	2.4	chr16	14321673	14321798	(76016547)	+	MLT1K	LTR/ERVL-MaLR	144	270	(325)	1421853
319	19.3	2.2	7.4	chr16	19137410	19137504	(71200841)	C	L1ME3A	LINE/L1	(252)	5921	5832	1432789
747	18.2	6.1	3.4	chr16	19137505	19137680	(71200665)	+	MER20	DNA/hAT-Charlie	39	219	(0)	1432790
398	24.2	3.9	0.0	chr16	19177237	19177335	(71161010)	C	MER91C	DNA/hAT-Tip100	(30)	110	8	1432896
427	29.6	3.9	4.4	chr16	19886480	19886659	(70451686)	+	MIR	SINE/MIR	84	262	(0)	1434583
277	17.9	6.7	0.0	chr16	19960198	19960253	(70378092)	+	AluYe5	SINE/Alu	230	289	(21)	1434784
972	19.9	9.3	0.5	chr16	19960323	19960519	(70377826)	+	MER58A	DNA/hAT-Charlie	4	219	(5)	1434785
275	31.1	0.0	6.2	chr16	20742076	20742113	(69596232)	+	MLT1N2	LTR/ERVL-MaLR	438	475	(87)	1436389
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
311	30.4	9.0	4.7	chr16	23297178	23297367	(67040978)	C	L3	LINE/CR1	(693)	3406	3208	1441925
601	26.8	8.9	3.3	chr16	23469689	23469931	(66868414)	+	MLT1K	LTR/ERVL-MaLR	327	584	(11)	1442351
27	25.9	0.0	6.9	chr16	23836022	23836137	(66502208)	+	(CCGCGG)n	Simple_repeat	1	116	(0)	1443259
46	5.7	0.0	0.0	chr16	24729669	24729723	(65608622)	+	(GCG)n	Simple_repeat	1	55	(0)	1445420
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
976	33.2	6.8	3.1	chr16	28534559	28534981	(61803364)	+	MLT1J	LTR/ERVL-MaLR	13	452	(60)	1453775
730	29.7	7.6	0.4	chr16	29791586	29791818	(60546527)	C	MIR	SINE/MIR	(3)	259	9	1456581
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
4260	9.3	1.9	0.3	chr16	30544321	30544937	(59793408)	C	HERVFH21-int	LTR/ERV1	(2828)	3701	3075	1458305
1195	14.3	3.2	9.9	chr16	30638032	30638264	(59700081)	+	MER20	DNA/hAT-Charlie	1	217	(2)	1458529
383	26.3	7.1	6.0	chr16	30875870	30876035	(59462310)	C	MIRc	SINE/MIR	(98)	170	3	1459067
309	31.9	6.6	0.0	chr16	30935183	30935295	(59403050)	+	L2a	LINE/L2	3305	3425	(1)	1459236
218	35.8	9.1	0.5	chr16	30935320	30935510	(59402835)	C	L2	LINE/L2	(1813)	1606	1398	1459235
808	11.3	0.0	8.5	chr16	30951583	30951723	(59386622)	+	FLAM_C	SINE/Alu	5	133	(10)	1459276
892	28.2	3.5	6.9	chr16	30951724	30951976	(59386369)	C	MER102b	DNA/hAT-Charlie	(97)	244	1	1459275
439	22.6	0.0	0.0	chr16	31443281	31443364	(58894981)	C	MER96B	DNA/hAT-Tip100	(3)	414	331	1460322
35486	13.6	2.5	0.9	chr16	35904670	35910398	(54427947)	C	HERVH48-int	LTR/ERV1	(831)	5823	2	1465248
316	19.9	4.7	3.1	chr16	48605633	48605730	(41732615)	C	Charlie10	DNA/hAT-Charlie	(137)	126	26	1469080
287	37.9	5.2	4.4	chr16	49860857	49861010	(40477335)	C	L2c	LINE/L2	(5)	3382	3234	1471249
786	13.9	0.8	0.0	chr16	53711257	53711378	(36626967)	+	MER105	DNA/hAT-Charlie	73	195	(8)	1478294
1135	28.8	7.9	3.7	chr16	54793832	54794246	(35544099)	+	MLT1K	LTR/ERVL-MaLR	4	426	(169)	1480153
4314	9.6	0.7	0.0	chr16	54794247	54794796	(35543549)	C	MER41A	LTR/ERV1	(0)	554	1	1480154
184	19.1	15.0	1.4	chr16	57187618	57187686	(33150659)	+	MIRc	SINE/MIR	179	258	(10)	1484534
650	27.4	5.0	2.8	chr16	58661484	58661697	(31676648)	C	MIRb	SINE/MIR	(29)	239	21	1487573
20	26.9	0.0	2.9	chr16	67562427	67562496	(22775849)	+	(CCCCT)n	Simple_repeat	1	70	(0)	1501890
12	28.1	1.9	1.9	chr16	67562503	67562555	(22775790)	+	(GCGCCG)n	Simple_repeat	1	54	(0)	1501891
962	17.2	3.7	2.3	chr16	69533086	69533299	(20805046)	C	MER20	DNA/hAT-Charlie	(0)	219	3	1506015
561	22.8	19.9	3.7	chr16	69554636	69554885	(20783460)	+	MLT1J	LTR/ERVL-MaLR	107	401	(111)	1506083
14	8.9	11.1	0.0	chr16	71884098	71884133	(18454212)	+	(CAGA)n	Simple_repeat	1	40	(0)	1510564
15	24.6	0.0	0.0	chr16	71884210	71884252	(18454093)	+	(CCTCCC)n	Simple_repeat	1	43	(0)	1510565
781	13.0	4.7	0.0	chr16	75648731	75648853	(14689492)	C	FLAM_C	SINE/Alu	(14)	129	1	1517226
529	30.2	2.4	0.6	chr16	78127048	78127210	(12211135)	+	MIRb	SINE/MIR	15	180	(88)	1521181
1696	26.7	8.6	7.2	chr16	78571873	78572313	(11766032)	+	L1ME3D	LINE/L1	5415	5889	(353)	1521961
1816	14.8	10.7	7.4	chr16	81181317	81181500	(9156845)	+	MSTB1	LTR/ERVL-MaLR	1	194	(238)	1526692
2199	11.2	0.0	0.0	chr16	81181501	81181804	(9156541)	+	AluSx1	SINE/Alu	1	304	(8)	1526693
590	18.8	6.6	6.6	chr16	81723281	81723417	(8614928)	C	MER91B	DNA/hAT-Tip100	(48)	142	6	1527856
440	16.2	26.0	4.3	chr16	84411367	84411439	(5926906)	+	MER3	DNA/hAT-Charlie	2	117	(92)	1532784
1130	26.1	4.5	4.3	chr16	84423419	84423815	(5914530)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	51	1532807
444	34.0	6.9	1.0	chr16	84952158	84952362	(5385983)	C	L2b	LINE/L2	(360)	3059	2842	1533906
723	31.4	6.4	3.8	chr16	85227795	85228329	(5110016)	C	L2b	LINE/L2	(0)	3375	2830	1534438
442	35.1	7.6	2.1	chr16	85228409	85228644	(5109701)	+	MIRb	SINE/MIR	5	254	(14)	1534439
214	26.1	4.4	0.0	chr16	85331022	85331086	(5007259)	+	MIRc	SINE/MIR	84	151	(117)	1534649
5013	4.7	0.6	0.0	chr16	85818573	85819236	(4519109)	+	L1P1	LINE/L1	4687	5354	(792)	1535501
291	29.8	11.0	2.4	chr16	87394520	87394643	(2943702)	C	MIR3	SINE/MIR	(21)	187	52	1538358
27	2.8	2.6	2.5	chr16	87765858	87765896	(2572449)	+	(GCCCTTCTT)n	Simple_repeat	1	40	(0)	1539014
13	7.8	3.5	3.3	chr16	87807261	87807289	(2531056)	+	(GGAG)n	Simple_repeat	1	30	(0)	1539109
1892	21.4	10.7	0.6	chr16	88423503	88424006	(1914339)	C	MLT1F1	LTR/ERVL-MaLR	(7)	562	2	1539956
1529	23.0	10.3	1.3	chr16	89333230	89333780	(1004565)	C	L1MC1	LINE/L1	(5)	6328	5707	1541095
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
189	35.4	1.2	0.0	chr17	2101448	2101526	(81155915)	C	MIRb	SINE/MIR	(92)	176	97	1548431
3335	17.2	3.5	3.6	chr17	2102671	2103167	(81154274)	C	L1MA7	LINE/L1	(163)	6128	5625	1548433
353	30.1	5.5	0.0	chr17	2786212	2786314	(80471127)	C	MIR3	SINE/MIR	(68)	140	32	1549946
468	33.6	8.5	0.9	chr17	3888400	3888627	(79368814)	+	MIR	SINE/MIR	16	262	(0)	1551942
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
2305	14.8	2.9	7.3	chr17	5467419	5467927	(77789514)	+	LTR19A	LTR/ERV1	1	486	(0)	1555202
564	21.3	3.9	9.4	chr17	6413133	6413324	(76844117)	C	MER91B	DNA/hAT-Tip100	(6)	184	4	1557034
4844	9.5	0.7	0.9	chr17	6853730	6854409	(76403032)	+	L1PBa1	LINE/L1	118	796	(5816)	1557822
12	23.3	7.3	0.0	chr17	7214009	7214063	(76043378)	+	(CCTTTTC)n	Simple_repeat	1	59	(0)	1558465
503	32.2	3.6	3.6	chr17	8041995	8042242	(75215199)	C	MLT1O	LTR/ERVL-MaLR	(252)	290	43	1560001
11977	27.9	2.3	1.6	chr17	8057909	8058482	(75198959)	+	HERVK-int	LTR/ERVK	966	1551	(5985)	1560027
11977	27.9	2.3	1.6	chr17	8058796	8061901	(75195540)	+	HERVK-int	LTR/ERVK	1552	4676	(2860)	1560027
643	2.8	0.0	0.0	chr17	8119752	8119823	(75137618)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	1560129
31	19.2	1.2	3.6	chr17	8163007	8163089	(75094352)	+	G-rich	Low_complexity	1	84	(0)	1560201
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
779	1.2	0.0	0.0	chr17	8226607	8226691	(75030750)	C	tRNA-Ser-TCY	tRNA	(0)	85	1	1560366
829	25.9	7.1	1.7	chr17	12391125	12391418	(70866023)	C	MER113A	DNA/hAT-Charlie	(3)	311	1	1567986
328	28.3	16.6	3.7	chr17	13031667	13031912	(70225529)	C	MER102a	DNA/hAT-Charlie	(2)	328	45	1569080
345	31.6	14.9	0.6	chr17	16438620	16438801	(66818640)	C	MIRc	SINE/MIR	(7)	261	56	1574991
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
786	25.9	17.1	2.8	chr17	18094186	18094688	(65162753)	C	L2a	LINE/L2	(0)	3426	2842	1577944
1952	20.8	16.0	4.2	chr17	27276652	27277228	(55980213)	+	MLT2F	LTR/ERVL	3	660	(3)	1586433
6860	10.5	13.8	1.6	chr17	28261720	28262802	(54994639)	+	MER11B	LTR/ERVK	1	1236	(0)	1588356
262	31.6	2.2	4.9	chr17	30095960	30096102	(53161339)	+	LTR104_Mam	LTR/Gypsy	62	200	(1309)	1591906
2155	11.1	0.7	0.0	chr17	30122386	30122703	(53134738)	C	AluSx	SINE/Alu	(0)	312	1	1591979
2912	16.9	7.8	10.8	chr17	30122704	30122968	(53134473)	C	L1MB7	LINE/L1	(580)	5604	5332	1591977
284	23.4	7.2	0.0	chr17	30336417	30336480	(52920961)	C	L2a	LINE/L2	(8)	3418	3350	1592383
531	23.0	3.1	1.6	chr17	30336489	30336616	(52920825)	C	MER91B	DNA/hAT-Tip100	(13)	177	48	1592384
33	12.7	0.0	0.0	chr17	30711029	30711088	(52546353)	+	(CT)n	Simple_repeat	1	60	(0)	1593101
1115	23.3	12.2	6.5	chr17	31075123	31075553	(52181888)	+	LTR16A2	LTR/ERVL	32	490	(5)	1593951
11	24.0	4.5	0.0	chr17	31075558	31075601	(52181840)	+	A-rich	Low_complexity	1	46	(0)	1593952
1870	30.1	8.5	6.9	chr17	31114873	31115104	(52142337)	C	ERVL-E-int	LTR/ERVL	(560)	5107	4902	1594033
1185	18.2	2.3	2.7	chr17	31115105	31115324	(52142117)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1594036
317	24.6	5.9	9.0	chr17	33199859	33200154	(50057287)	+	L2c	LINE/L2	2885	3164	(211)	1598164
1786	22.7	13.5	2.3	chr17	33200303	33201305	(50056136)	+	L2a	LINE/L2	2275	3425	(1)	1598165
1301	14.3	0.0	2.2	chr17	35118110	35118331	(48139110)	+	MER20	DNA/hAT-Charlie	1	217	(2)	1601734
652	2.7	0.0	0.0	chr17	38861683	38861755	(44395686)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608756
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
26	19.2	1.7	0.0	chr17	39402258	39402316	(43855125)	+	(GCC)n	Simple_repeat	1	60	(0)	1610002
12	17.0	8.3	1.9	chr17	40219255	40219302	(43038139)	+	(TCTCTCC)n	Simple_repeat	1	52	(0)	1611611
1108	17.3	9.3	0.0	chr17	40290651	40290864	(42966577)	C	MER44B	DNA/TcMar-Tigger	(284)	266	31	1611786
214	24.1	17.1	2.2	chr17	41738204	41738292	(41519149)	C	MIRc	SINE/MIR	(49)	219	115	1614171
399	22.6	2.0	2.8	chr17	41793587	41793709	(41463732)	C	MIR3	SINE/MIR	(132)	136	14	1614307
13	0.0	0.0	8.0	chr17	42050479	42050503	(41206938)	+	(CCGC)n	Simple_repeat	1	25	(0)	1614843
375	28.1	8.4	1.6	chr17	42270752	42270959	(40986482)	+	MIR	SINE/MIR	38	262	(0)	1615282
393	26.7	4.8	11.3	chr17	42678934	42679136	(40578305)	C	L3	LINE/CR1	(25)	4074	3886	1616136
13	22.1	0.0	0.0	chr17	42980635	42980666	(40276775)	+	GA-rich	Low_complexity	1	32	(0)	1616805
7310	10.3	0.5	1.5	chr17	43365612	43366679	(39890762)	C	MER11C	LTR/ERVK	(14)	1057	1	1617632
2175	10.4	0.3	0.0	chr17	43368407	43368693	(39888748)	C	AluSx3	SINE/Alu	(23)	288	1	1617636
497	24.8	1.8	15.2	chr17	43556132	43556351	(39701090)	C	L1ME4b	LINE/L1	(29)	863	668	1618092
361	34.6	2.4	1.7	chr17	44367176	44367429	(38890012)	C	CR1-3_Croc	LINE/CR1	(1273)	2332	2124	1619793
194	26.7	1.6	1.6	chr17	45284198	45284258	(37973183)	+	MIR	SINE/MIR	13	73	(189)	1621725
2027	16.0	0.0	0.0	chr17	47280351	47280656	(35976785)	C	AluSz	SINE/Alu	(6)	306	1	1625719
248	27.5	1.4	0.0	chr17	48002738	48002806	(35254635)	C	Plat_L3	LINE/CR1	(577)	3009	2940	1627098
2463	15.3	1.8	2.9	chr17	50448504	50448953	(32808488)	C	MER65A	LTR/ERV1	(0)	445	1	1631806
971	21.6	15.0	4.4	chr17	51461578	51462198	(31795243)	+	LTR50	LTR/ERVL	1	795	(0)	1633829
280	32.0	0.8	3.9	chr17	51703430	51703556	(31553885)	+	MIRc	SINE/MIR	96	218	(50)	1634250
434	33.0	4.6	0.0	chr17	55248167	55248430	(28009011)	+	MLT1J	LTR/ERVL-MaLR	164	482	(30)	1639313
410	29.7	18.0	1.9	chr17	55356956	55357168	(27900273)	C	MIR	SINE/MIR	(1)	261	7	1639487
627	31.7	9.6	5.0	chr17	57753432	57754009	(25503432)	+	MLT1L	LTR/ERVL-MaLR	4	610	(0)	1643779
595	20.4	11.4	6.4	chr17	57775041	57775213	(25482228)	+	MLT1J1	LTR/ERVL-MaLR	21	206	(205)	1643820
532	26.2	1.3	0.7	chr17	57788794	57788943	(25468498)	+	L1ME4c	LINE/L1	288	438	(392)	1643838
1635	20.8	13.3	4.4	chr17	58122025	58122229	(25135212)	C	Kanga1d	DNA/TcMar-Tc2	(386)	223	8	1644494
265	32.6	12.4	3.2	chr17	58385748	58385824	(24871617)	+	MIR	SINE/MIR	47	144	(118)	1644911
1641	19.3	2.6	1.0	chr17	58385825	58386130	(24871311)	+	AluJr	SINE/Alu	1	311	(1)	1644912
248	33.9	3.5	2.5	chr17	58413650	58413849	(24843592)	+	CR1-13_AMi	LINE/CR1	224	425	(299)	1644948
203	24.2	15.3	0.5	chr17	58413885	58413977	(24843464)	+	X6A_LINE	LINE/CR1	963	1080	(0)	1644949
515	29.6	13.9	6.5	chr17	59003177	59003438	(24254003)	+	L1MEd	LINE/L1	745	1037	(6457)	1646200
1332	25.3	3.6	11.2	chr17	59475901	59476411	(23781030)	+	MLT1H1	LTR/ERVL-MaLR	1	502	(53)	1647332
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
679	27.5	10.9	8.0	chr17	60352145	60352543	(22904898)	+	MLT1J	LTR/ERVL-MaLR	99	510	(2)	1649060
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
1382	27.4	9.3	2.5	chr17	60971488	60971958	(22285483)	C	HERVL40-int	LTR/ERVL	(2363)	3167	2662	1650334
274	16.1	5.1	0.0	chr17	63834996	63835051	(19422390)	C	MER91B	DNA/hAT-Tip100	(54)	136	78	1655429
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
3869	16.3	3.0	2.4	chr17	65784788	65785542	(17471899)	C	L1MB7	LINE/L1	(0)	6184	5425	1659275
274	31.0	17.4	1.8	chr17	66906506	66906722	(16350719)	C	L2c	LINE/L2	(17)	3370	3113	1661027
3184	16.7	1.0	7.3	chr17	67321951	67322576	(15934865)	+	LTR9	LTR/ERV1	28	612	(0)	1661797
601	16.2	3.5	0.0	chr17	67582992	67583102	(15674339)	C	MER5B	DNA/hAT-Charlie	(0)	178	64	1662322
2314	10.5	0.0	0.3	chr17	67584833	67585136	(15672305)	+	AluSp	SINE/Alu	1	303	(10)	1662330
304	27.8	8.9	8.0	chr17	67585137	67585338	(15672103)	C	L2a	LINE/L2	(85)	3341	3091	1662329
23	7.2	0.0	0.0	chr17	71181092	71181121	(12076320)	+	(AC)n	Simple_repeat	1	30	(0)	1668392
266	36.0	1.0	0.0	chr17	74301267	74301366	(8956075)	+	MER91B	DNA/hAT-Tip100	37	137	(53)	1673886
233	34.7	5.5	9.0	chr17	74457575	74457707	(8799734)	+	L2c	LINE/L2	3256	3383	(4)	1674191
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
2127	10.9	0.0	0.3	chr17	75133852	75134145	(8123296)	+	AluSg	SINE/Alu	1	293	(17)	1675420
877	15.7	2.8	4.0	chr17	75134204	75134325	(8123116)	+	MER21B	LTR/ERVL	613	791	(140)	1675421
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
190	27.0	8.7	0.0	chr17	76729447	76729509	(6527932)	+	L2a	LINE/L2	3353	3421	(5)	1678624
2492	18.1	1.3	5.7	chr17	76853990	76854096	(6403345)	C	L1MB3	LINE/L1	(41)	6142	6035	1678899
1778	15.2	2.0	5.4	chr17	76854097	76854411	(6403030)	+	AluJo	SINE/Alu	1	304	(8)	1678900
13	19.2	2.8	0.0	chr17	78843425	78843460	(4413981)	+	(AGAGGC)n	Simple_repeat	1	37	(0)	1682544
2151	23.6	9.9	0.4	chr17	78950664	78951185	(4306256)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	1682746
12109	14.3	2.8	0.9	chr18	2469951	2472006	(77901279)	+	ERVL-B4-int	LTR/ERVL	2472	4567	(1147)	1692715
2643	26.4	6.0	5.2	chr18	8191503	8192949	(72180336)	+	L1MC5a	LINE/L1	737	2658	(333)	1701056
289	31.0	2.9	1.0	chr18	10787420	10787520	(69585765)	+	MIRb	SINE/MIR	156	258	(10)	1704962
332	31.5	9.8	3.2	chr18	11872708	11872897	(68500388)	C	MIRb	SINE/MIR	(36)	232	29	1706481
247	28.7	1.6	10.9	chr18	23964413	23964549	(56408736)	C	LTR91	LTR/ERVL	(44)	155	32	1717129
2307	25.6	6.8	4.7	chr18	28961192	28961709	(51411576)	C	L1ME2	LINE/L1	(19)	6145	5638	1724409
1669	26.6	15.3	1.1	chr18	28961710	28962363	(51410922)	+	LTR41	LTR/ERVL	1	764	(4)	1724410
308	36.3	4.6	1.6	chr18	42114393	42114518	(38258767)	C	MIRc	SINE/MIR	(94)	174	45	1742374
368	27.8	13.2	0.0	chr18	43564036	43564179	(36809106)	C	MIR	SINE/MIR	(0)	262	97	1744359
223	25.7	15.8	1.9	chr18	44895540	44895642	(35477643)	C	MIR1_Amn	SINE/MIR	(108)	122	3	1746107
15	16.3	0.0	2.8	chr18	48676988	48677023	(31696262)	+	G-rich	Low_complexity	1	36	(0)	1752281
355	27.2	4.6	2.3	chr18	48931681	48931808	(31441477)	C	MIR3	SINE/MIR	(30)	178	48	1752693
721	23.2	15.3	0.1	chr18	49744626	49744839	(30628446)	+	MIR	SINE/MIR	2	247	(21)	1754138
194	32.9	7.1	5.0	chr18	50821238	50821458	(29551827)	C	L2	LINE/L2	(1729)	1690	1465	1755801
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
207	22.8	10.2	3.7	chr18	50968522	50968603	(29404682)	C	MER5B	DNA/hAT-Charlie	(4)	174	87	1756119
297	30.4	9.1	7.1	chr18	54119783	54120051	(26253234)	+	LTR88c	LTR/Gypsy?	41	315	(547)	1760743
964	29.7	6.3	4.9	chr18	57815445	57815915	(22557370)	+	MLT1J	LTR/ERVL-MaLR	31	508	(4)	1766239
2105	19.0	10.4	7.2	chr18	58157894	58158438	(22214847)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	5	1766902
1576	27.0	13.1	1.3	chr18	59079429	59080033	(21293252)	C	ERVL-E-int	LTR/ERVL	(1648)	4019	3333	1768413
35	0.0	0.0	0.0	chr18	61088928	61088965	(19284320)	+	(GA)n	Simple_repeat	1	38	(0)	1771413
51	0.0	0.0	0.0	chr18	61088966	61089009	(19284276)	+	(GT)n	Simple_repeat	1	44	(0)	1771414
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
816	26.4	9.9	3.4	chr19	1624596	1624853	(56992763)	+	Tigger17	DNA/TcMar-Tigger	1	285	(2388)	1799162
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
2207	12.7	0.0	0.0	chr19	4411231	4411529	(54206087)	C	AluSx1	SINE/Alu	(13)	299	1	1805533
2234	11.3	0.3	0.7	chr19	4411643	4411943	(54205673)	C	AluSx1	SINE/Alu	(7)	305	6	1805534
975	29.7	6.5	2.0	chr19	5325016	5325410	(53292206)	C	MLT1J	LTR/ERVL-MaLR	(77)	435	22	1807670
969	24.1	10.9	1.5	chr19	5374111	5374435	(53243181)	+	L2a	LINE/L2	3066	3426	(0)	1807802
259	32.1	7.5	1.6	chr19	5374450	5374604	(53243012)	C	MIRb	SINE/MIR	(96)	172	3	1807803
1644	25.4	7.1	0.8	chr19	6125316	6125788	(52491828)	C	Charlie17b	DNA/hAT-Charlie	(345)	859	355	1809478
1986	16.1	0.0	1.3	chr19	6126095	6126392	(52491224)	C	AluJr	SINE/Alu	(18)	294	1	1809479
21	0.0	0.0	0.0	chr19	6126404	6126426	(52491190)	+	(AC)n	Simple_repeat	1	23	(0)	1809480
1379	25.1	9.3	6.3	chr19	6126478	6126984	(52490632)	C	LTR55	LTR/ERVL?	(24)	524	1	1809481
60	0.0	0.0	0.0	chr19	6166281	6166331	(52451285)	+	(TG)n	Simple_repeat	1	51	(0)	1809599
46	4.3	0.0	0.0	chr19	6504787	6504834	(52112782)	+	(GT)n	Simple_repeat	1	48	(0)	1810419
947	15.8	1.8	17.0	chr19	6504835	6505075	(52112541)	+	MER20	DNA/hAT-Charlie	15	219	(0)	1810418
626	26.5	11.9	5.6	chr19	6811776	6812205	(51805411)	C	MLT1J2	LTR/ERVL-MaLR	(8)	440	4	1811237
12	10.1	8.3	5.8	chr19	8209546	8209593	(50408023)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1814709
6003	5.7	1.7	0.1	chr19	8385635	8386395	(50231221)	+	HERV9-int	LTR/ERV1	7664	8436	(0)	1815188
14	26.3	0.0	0.0	chr19	8445001	8445041	(50172575)	+	(GGC)n	Simple_repeat	1	41	(0)	1815353
286	28.1	3.5	7.3	chr19	8552851	8553000	(50064616)	C	LTR91	LTR/ERVL	(15)	184	41	1815564
430	25.0	6.0	2.1	chr19	9140307	9140449	(49477167)	+	LTR33B	LTR/ERVL	77	225	(278)	1816898
1118	16.2	3.6	1.4	chr19	10000058	10000276	(48617340)	+	MER87B	LTR/ERV1	286	509	(0)	1818663
386	25.7	4.1	9.1	chr19	10000389	10000452	(48617164)	+	L2	LINE/L2	2739	2801	(618)	1818664
406	28.9	2.5	8.2	chr19	10858474	10858643	(47758973)	C	MIRb	SINE/MIR	(13)	255	96	1820853
2370	9.4	0.0	0.0	chr19	10936490	10936787	(47680829)	+	AluSx1	SINE/Alu	1	298	(14)	1821038
798	29.3	7.3	2.6	chr19	11067322	11067757	(47549859)	+	MLT1G	LTR/ERVL-MaLR	43	549	(0)	1821337
257	36.4	10.1	1.4	chr19	13050170	13050386	(45567230)	+	L2c	LINE/L2	2916	3153	(234)	1825810
600	23.3	3.3	9.2	chr19	13284669	13284928	(45332688)	+	Zaphod2	DNA/hAT-Tip100	2	245	(3279)	1826328
62	14.5	0.0	0.0	chr19	14204663	14204768	(44412848)	+	(AGAG)n	Simple_repeat	1	106	(0)	1828818
471	17.5	4.6	1.0	chr19	15286777	15286880	(43330736)	C	Charlie5	DNA/hAT-Charlie	(2494)	130	23	1831504
218	26.4	13.8	1.9	chr19	16115732	16115839	(42501777)	C	L2a	LINE/L2	(9)	3417	3295	1833157
1414	19.7	8.8	5.7	chr19	16608170	16608541	(42009075)	+	MER63D	DNA/hAT-Blackjack	6	390	(671)	1834265
2547	18.2	1.7	2.1	chr19	17466220	17466741	(41150875)	C	LTR13A	LTR/ERVK	(446)	520	1	1836437
882	19.2	1.8	1.2	chr19	18522822	18522988	(40094628)	C	AluJb	SINE/Alu	(7)	305	138	1839005
439	30.3	4.9	4.9	chr19	18542172	18542376	(40075240)	C	MIRb	SINE/MIR	(13)	255	51	1839063
16	3.2	5.6	5.3	chr19	18919308	18919343	(39698273)	+	(CCGGAGG)n	Simple_repeat	1	38	(0)	1839830
1863	18.7	1.0	0.0	chr19	28426078	28426377	(30191239)	+	AluSz	SINE/Alu	2	304	(8)	1848752
1463	27.7	1.6	2.5	chr19	28426378	28426661	(30190955)	+	MLT1C	LTR/ERVL-MaLR	185	466	(1)	1848751
2422	19.2	2.4	9.2	chr19	28631687	28632074	(29985542)	+	L1MA5A	LINE/L1	7065	7365	(351)	1849065
1550	29.2	5.5	2.8	chr19	28632089	28632691	(29984925)	+	L1PA15-16	LINE/L1	9	628	(6706)	1849072
1722	16.2	0.3	1.8	chr19	29943853	29944136	(28673480)	+	AluJr	SINE/Alu	1	280	(32)	1851209
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
1085	14.7	0.6	0.0	chr19	33060157	33060313	(25557303)	C	AluJb	SINE/Alu	(22)	290	133	1856064
16	18.3	2.2	2.2	chr19	33295584	33295628	(25321988)	+	(GAGGAT)n	Simple_repeat	1	46	(0)	1856549
1902	20.7	6.5	5.0	chr19	34793623	34793915	(23823701)	C	MER41B	LTR/ERV1	(36)	598	214	1859148
6051	11.2	14.5	2.4	chr19	34965025	34966107	(23651509)	+	MER11B	LTR/ERVK	1	1236	(0)	1859404
783	18.9	1.8	6.1	chr19	34973560	34973603	(23644013)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1859420
56	0.0	0.0	0.0	chr19	34973604	34973651	(23643965)	+	(GT)n	Simple_repeat	1	48	(0)	1859421
2231	8.5	0.3	0.0	chr19	34973652	34973934	(23643682)	C	AluSx1	SINE/Alu	(28)	284	1	1859422
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
320	20.9	2.9	0.0	chr19	36850363	36850429	(21767187)	C	MER67D	LTR/ERV1	(1)	513	445	1863382
711	18.1	11.3	3.1	chr19	36850413	36850663	(21766953)	C	MER31B	LTR/ERV1	(74)	392	1	1863383
892	29.3	4.0	3.0	chr19	37928761	37929161	(20688455)	C	MLT1L	LTR/ERVL-MaLR	(29)	581	177	1865401
967	18.1	3.4	7.0	chr19	38316237	38316451	(20301165)	+	AluJo	SINE/Alu	14	220	(92)	1866379
268	26.3	49.5	0.0	chr19	38684077	38684209	(19933407)	+	MIR	SINE/MIR	60	259	(3)	1867246
871	9.3	0.8	0.0	chr19	38832012	38832129	(19785487)	+	AluYc	SINE/Alu	181	299	(0)	1867545
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
1681	16.0	6.3	9.3	chr19	39038387	39038494	(19579122)	+	MER66B	LTR/ERV1	1	85	(401)	1868074
570	14.6	3.7	0.0	chr19	39073976	39074078	(19543538)	+	Alu	SINE/Alu	206	312	(0)	1868175
452	21.2	3.4	1.7	chr19	40208685	40208799	(18408817)	C	MER3	DNA/hAT-Charlie	(39)	170	54	1870492
669	16.6	8.3	2.2	chr19	40208843	40208978	(18408638)	C	MER5A	DNA/hAT-Charlie	(44)	145	1	1870493
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
188	23.7	7.0	3.1	chr19	40444957	40445052	(18172564)	+	L2a	LINE/L2	2821	2920	(499)	1871079
302	22.7	1.3	3.9	chr19	40445156	40445233	(18172383)	+	L2a	LINE/L2	3327	3402	(24)	1871079
552	18.9	15.4	0.0	chr19	40465100	40465231	(18152385)	+	MIR	SINE/MIR	12	167	(95)	1871150
243	32.7	3.2	1.7	chr19	40598566	40598696	(18018920)	C	MIR3	SINE/MIR	(136)	132	2	1871499
240	28.8	16.9	1.7	chr19	40716456	40716575	(17901041)	+	MIRb	SINE/MIR	117	258	(10)	1871777
2337	8.0	0.3	1.3	chr19	40754101	40754399	(17863217)	C	AluSg7	SINE/Alu	(13)	296	1	1871874
196	38.9	5.5	0.4	chr19	40754455	40754694	(17862922)	C	L2c	LINE/L2	(167)	3220	2968	1871875
389	29.3	4.6	4.6	chr19	40897255	40897420	(17720196)	C	MIR	SINE/MIR	(8)	254	88	1872193
246	21.7	2.5	19.6	chr19	41144642	41144715	(17472901)	C	MIR	SINE/MIR	(0)	262	203	1872695
2131	9.3	0.0	5.0	chr19	41144716	41145036	(17472580)	C	AluSx3	SINE/Alu	(6)	305	1	1872696
286	33.0	2.5	2.5	chr19	41883869	41883986	(16733630)	C	MIR3	SINE/MIR	(61)	147	30	1874122
13	4.5	0.0	7.4	chr19	42075887	42075913	(16541703)	+	(GGA)n	Simple_repeat	1	27	(0)	1874519
221	30.7	1.4	1.4	chr19	42433373	42433462	(16184154)	+	MIR1_Amn	SINE/MIR	66	160	(70)	1875275
7919	7.2	1.4	0.0	chr19	43210290	43211282	(15406334)	C	LTR13	LTR/ERVK	(0)	1007	1	1876391
2281	11.3	0.0	0.3	chr19	43440915	43441224	(15176392)	C	AluSz6	SINE/Alu	(3)	309	1	1876769
1068	14.3	0.0	0.0	chr19	43441226	43441372	(15176244)	C	AluJb	SINE/Alu	(19)	293	147	1876770
311	20.8	12.2	3.7	chr19	43574748	43574882	(15042734)	C	MIR3	SINE/MIR	(87)	181	32	1877148
326	26.2	4.8	0.0	chr19	43670624	43670703	(14946913)	+	L2a	LINE/L2	3340	3423	(3)	1877382
1565	7.2	4.2	2.4	chr19	43670766	43670973	(14946643)	+	AluSc	SINE/Alu	97	308	(1)	1877383
13	18.9	2.8	0.0	chr19	43766656	43766691	(14850925)	+	(GCCCCA)n	Simple_repeat	1	37	(0)	1877624
467	24.5	1.9	0.9	chr19	43785559	43785665	(14831951)	C	L2a	LINE/L2	(27)	3399	3292	1877666
14	12.7	0.0	0.0	chr19	44025683	44025708	(14591908)	+	(TTGT)n	Simple_repeat	1	26	(0)	1878072
3328	12.6	7.9	3.1	chr19	44111865	44112444	(14505172)	C	LTR9	LTR/ERV1	(0)	612	3	1878223
957	21.1	23.8	7.0	chr19	44588556	44589012	(14028604)	+	MLT1F2	LTR/ERVL-MaLR	28	560	(0)	1879055
364	26.0	7.2	0.9	chr19	44824290	44824434	(13793182)	C	L1ME3G	LINE/L1	(607)	317	180	1879719
2398	8.8	0.7	0.3	chr19	44824436	44824740	(13792876)	C	AluSq2	SINE/Alu	(7)	306	1	1879720
2388	8.4	0.3	0.0	chr19	45630273	45630570	(12987046)	+	AluSx3	SINE/Alu	2	300	(11)	1881837
398	30.1	8.6	4.5	chr19	45630599	45630842	(12986774)	C	ORSL-2b	DNA/hAT-Tip100	(70)	438	173	1881838
320	19.3	6.1	4.0	chr19	46544116	46544253	(12073363)	+	MLT1H1	LTR/ERVL-MaLR	310	489	(90)	1883955
1832	14.3	1.8	0.4	chr19	46785105	46785383	(11832233)	+	AluJb	SINE/Alu	6	288	(24)	1884536
788	23.6	7.7	2.7	chr19	46785389	46785610	(11832006)	C	MIR	SINE/MIR	(1)	261	28	1884537
17	18.7	3.3	4.8	chr19	47113141	47113200	(11504416)	+	(GAGGCG)n	Simple_repeat	1	62	(0)	1885281
2481	7.8	0.0	0.0	chr19	48110067	48110375	(10507241)	+	AluSg	SINE/Alu	2	310	(0)	1887970
942	18.4	16.0	12.0	chr19	48110376	48110462	(10507154)	+	MLT1B	LTR/ERVL-MaLR	301	379	(11)	1887967
355	21.2	3.4	5.6	chr19	48203649	48203738	(10413878)	+	L2a	LINE/L2	3338	3425	(1)	1888195
1710	24.7	13.7	1.5	chr19	48529052	48529488	(10088128)	C	MLT1F	LTR/ERVL-MaLR	(40)	508	2	1888962
337	31.3	4.6	2.4	chr19	48675227	48675396	(9942220)	C	MER46C	DNA/TcMar-Tigger	(86)	252	79	1889342
181	18.0	0.0	10.7	chr19	48954548	48954603	(9663013)	+	L2	LINE/L2	3019	3068	(351)	1890057
495	34.3	4.6	2.5	chr19	49301076	49301371	(9316245)	+	L1M3c	LINE/L1	597	1030	(5749)	1890824
819	28.8	0.7	6.6	chr19	50759939	50760176	(7857440)	+	MLT1J	LTR/ERVL-MaLR	46	269	(243)	1894267
1319	22.8	11.9	3.4	chr19	50760178	50760240	(7857376)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	485	1894269
12	20.6	6.7	0.0	chr19	51366809	51366853	(7250763)	+	(TCCCTA)n	Simple_repeat	1	48	(0)	1895482
1993	18.4	9.6	0.2	chr19	55281215	55281649	(3335967)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	26	1903377
987	17.5	0.5	2.1	chr19	55639114	55639306	(2978310)	+	MER20	DNA/hAT-Charlie	1	190	(29)	1904213
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
2441	6.8	0.0	3.4	chr19	57916811	57917132	(700484)	+	AluYm1	SINE/Alu	1	311	(0)	1908540
5296	14.0	4.1	3.2	chr19	58252139	58252808	(364808)	C	HERV4_I-int	LTR/ERV1	(2443)	2572	1551	1909196
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
276	37.5	0.0	2.6	chr2	8989729	8989843	(233203686)	+	L3	LINE/CR1	3888	3999	(100)	1922140
215	26.9	4.9	11.4	chr2	8989956	8990043	(233203486)	C	MIR	SINE/MIR	(170)	92	11	1922141
253	38.2	5.8	0.0	chr2	18435464	18435594	(223757935)	C	L2	LINE/L2	(459)	2960	2822	1937454
3040	23.2	4.4	5.5	chr2	23268693	23269546	(218923983)	C	L1MEc	LINE/L1	(3085)	3234	2396	1944151
4629	7.1	0.3	0.2	chr2	25662900	25663509	(216530020)	C	L1PA8	LINE/L1	(5)	6167	5557	1948329
2393	6.8	0.0	0.7	chr2	28567461	28567752	(213625777)	C	AluSc5	SINE/Alu	(0)	309	20	1953789
956	18.8	5.4	1.0	chr2	32375587	32375780	(209817749)	+	Tigger2b_Pri	DNA/TcMar-Tigger	678	880	(188)	1960202
3351	15.6	6.3	2.3	chr2	32375759	32375903	(209817626)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(375)	693	558	1960203
367	26.3	8.1	0.0	chr2	37786792	37786905	(204406624)	+	MIRc	SINE/MIR	128	251	(17)	1968243
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
751	27.1	5.5	2.4	chr2	47232888	47233099	(194960430)	+	MIRb	SINE/MIR	36	254	(14)	1983594
18	25.1	3.3	0.0	chr2	47906520	47906580	(194286949)	+	G-rich	Low_complexity	1	63	(0)	1985047
207	38.7	0.0	1.3	chr2	54904083	54904158	(187289371)	C	L2c	LINE/L2	(43)	3344	3270	1995006
398	28.1	3.8	0.0	chr2	55071268	55071395	(187122134)	+	MIRc	SINE/MIR	105	237	(31)	1995230
915	30.2	22.5	2.4	chr2	63825466	63825914	(178367615)	C	MLT1I	LTR/ERVL-MaLR	(129)	543	4	2008399
420	24.3	9.9	4.0	chr2	64748682	64748855	(177444674)	C	MIR	SINE/MIR	(51)	211	25	2009873
30	9.6	2.2	0.0	chr2	66435286	66435331	(175758198)	+	(AG)n	Simple_repeat	1	47	(0)	2012779
19	0.0	0.0	0.0	chr2	72860028	72860048	(169333481)	+	(A)n	Simple_repeat	1	21	(0)	2022703
605	29.6	8.6	3.5	chr2	74509220	74509332	(167684197)	+	L2c	LINE/L2	2814	2919	(500)	2025507
377	30.5	11.7	14.5	chr2	74509360	74509746	(167683783)	+	L2c	LINE/L2	3052	3426	(0)	2025507
1011	18.3	4.6	1.9	chr2	75677405	75677616	(166515913)	+	MER20	DNA/hAT-Charlie	2	219	(0)	2027346
7381	15.2	1.6	0.1	chr2	84740998	84742176	(157451353)	C	L1M2a1	LINE/L1	(5929)	1653	2	2039381
450	26.7	9.6	1.3	chr2	86396678	86396829	(155796700)	+	MIRb	SINE/MIR	86	251	(17)	2042596
27	16.0	0.0	6.8	chr2	100263118	100263190	(141930339)	+	(CCTT)n	Simple_repeat	1	73	(0)	2057636
1622	13.2	0.0	3.6	chr2	109611507	109611757	(132581772)	+	AluJb	SINE/Alu	32	273	(39)	2070954
3922	16.3	6.2	2.5	chr2	109611758	109612551	(132580978)	+	L1MD1	LINE/L1	5418	6242	(0)	2070953
1058	18.0	5.9	1.0	chr2	112259514	112259721	(129933808)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2074806
3875	22.4	5.9	7.0	chr2	112259722	112260072	(129933457)	+	ERVL-E-int	LTR/ERVL	4791	5145	(522)	2074805
992	31.9	12.1	6.2	chr2	130328611	130329060	(111864469)	C	LTR78	LTR/ERV1	(505)	799	321	2101662
1688	22.2	9.4	1.9	chr2	144237681	144238094	(97955435)	+	MLT1F	LTR/ERVL-MaLR	4	451	(97)	2121126
305	27.1	9.1	5.4	chr2	144238082	144238229	(97955300)	+	LTR67B	LTR/ERVL	34	187	(433)	2121127
1843	19.2	12.1	10.9	chr2	151247249	151247562	(90945967)	C	LTR57-int	LTR/ERVL	(3763)	1580	693	2130550
2223	18.4	6.3	1.8	chr2	151247563	151248125	(90945404)	C	MER65-int	LTR/ERV1	(2721)	2150	1561	2130551
2885	13.0	4.2	0.0	chr2	151297568	151297983	(90895546)	C	LTR47B2	LTR/ERVL	(0)	434	1	2130640
21	9.5	0.0	0.0	chr2	151409773	151409806	(90783723)	+	(GGGAA)n	Simple_repeat	1	34	(0)	2130857
467	25.6	5.7	2.9	chr2	168156660	168156796	(74036733)	C	MIR	SINE/MIR	(114)	148	8	2153143
621	32.4	9.1	2.9	chr2	174491332	174491773	(67701756)	+	MLT1K	LTR/ERVL-MaLR	106	577	(18)	2163357
16	13.3	4.7	2.2	chr2	176830489	176830531	(65362998)	+	(TTGAGCT)n	Simple_repeat	1	45	(0)	2166680
15	16.9	0.0	0.0	chr2	177072167	177072199	(65121330)	+	(AGAGAC)n	Simple_repeat	1	33	(0)	2167043
14	27.2	0.0	2.0	chr2	177072200	177072210	(65121319)	+	GA-rich	Low_complexity	15	50	(0)	2167044
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
345	37.5	7.0	0.6	chr2	177334916	177335076	(64858453)	+	MIR3	SINE/MIR	16	187	(21)	2167494
1958	22.0	6.8	2.1	chr2	179240319	179240879	(62952650)	+	L1MD1	LINE/L1	21	609	(6024)	2169881
2053	20.7	7.0	2.3	chr2	179240892	179241548	(62951981)	+	L1MD1	LINE/L1	1162	1851	(4782)	2169881
266	28.6	2.8	0.0	chr2	182828720	182828789	(59364740)	C	MIRb	SINE/MIR	(169)	99	28	2174514
741	15.5	5.7	2.6	chr2	202104115	202104266	(40089263)	+	L1ME2	LINE/L1	6007	6163	(1)	2201215
3054	18.1	8.3	1.0	chr2	214593579	214594190	(27599339)	C	MER67B	LTR/ERV1	(0)	661	1	2219801
205	37.2	5.0	1.1	chr2	216034025	216034198	(26159331)	+	MamRTE1	LINE/RTE-BovB	3425	3605	(207)	2222036
1062	25.3	6.6	3.1	chr2	216034255	216034576	(26158953)	+	LTR16B	LTR/ERVL	3	336	(127)	2222037
4360	16.6	1.9	3.0	chr2	216114477	216115267	(26078262)	+	MER50C	LTR/ERV1	1	782	(0)	2222208
2064	24.5	13.8	0.7	chr2	217488297	217489137	(24704392)	+	L1ME3Cz	LINE/L1	40	997	(0)	2224474
1588	17.7	2.6	2.2	chr2	218301506	218301816	(23891713)	+	AluJr	SINE/Alu	1	312	(0)	2225809
18	8.5	0.0	0.0	chr2	231056469	231056493	(11137036)	+	(A)n	Simple_repeat	1	25	(0)	2246156
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
807	27.2	13.1	3.7	chr2	232698920	232699354	(9494175)	C	L2a	LINE/L2	(0)	3426	2945	2249159
335	17.6	10.8	1.3	chr2	234881790	234881864	(7311665)	+	MLT1M	LTR/ERVL-MaLR	96	178	(494)	2252707
1800	23.6	13.4	8.0	chr2	235136257	235136900	(7056629)	C	Zaphod3	DNA/hAT-Tip100	(3)	1202	542	2253088
1094	17.9	5.5	0.0	chr2	237132711	237132900	(5060629)	+	MER20	DNA/hAT-Charlie	1	201	(18)	2255981
409	22.9	10.3	0.0	chr2	237132904	237132999	(5060530)	C	ERVL-E-int	LTR/ERVL	(748)	4919	4813	2255982
762	17.0	34.3	0.6	chr2	241291681	241292011	(901518)	+	MLT1D	LTR/ERVL-MaLR	5	505	(0)	2260926
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
186	17.9	0.0	0.0	chr20	330603	330641	(64113526)	+	MIR3	SINE/MIR	81	119	(89)	2262676
1659	19.4	4.9	6.6	chr20	551581	551973	(63892194)	+	MLT1B	LTR/ERVL-MaLR	4	389	(1)	2263161
206	15.2	0.0	0.0	chr20	2873164	2873196	(61570971)	+	MIRc	SINE/MIR	121	153	(115)	2267730
2296	21.3	6.3	1.0	chr20	3855190	3855764	(60588403)	C	HAL1M8	LINE/L1	(2283)	708	102	2269651
2269	13.4	0.0	0.0	chr20	5582607	5582911	(58861256)	+	AluSz	SINE/Alu	1	305	(7)	2272797
184	21.7	14.3	0.0	chr20	6074311	6074370	(58369797)	+	MIR3	SINE/MIR	71	140	(68)	2273819
12	21.8	0.0	8.8	chr20	20635294	20635350	(43808817)	+	(AACCAAT)n	Simple_repeat	1	57	(0)	2295847
497	22.1	10.3	0.0	chr20	23235581	23235711	(41208456)	+	MamGypLTR3	LTR/Gypsy	593	738	(156)	2299412
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
2251	22.1	9.8	1.8	chr20	32255268	32255810	(32188357)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	1	2308018
17	7.8	0.0	0.0	chr20	32761822	32761848	(31682319)	+	(TCCCC)n	Simple_repeat	1	27	(0)	2309234
2106	8.6	4.9	0.0	chr20	32775958	32776247	(31667920)	+	AluSx	SINE/Alu	1	305	(7)	2309270
192	27.3	18.9	2.3	chr20	32776248	32776282	(31667885)	+	MIRb	SINE/MIR	205	241	(27)	2309269
1141	20.3	10.9	1.8	chr20	33554944	33555269	(30888898)	C	MER57E1	LTR/ERV1	(0)	372	14	2311061
643	25.3	8.6	5.3	chr20	33909557	33909936	(30534231)	+	MER65D	LTR/ERV1	1	435	(38)	2311889
466	20.4	19.1	2.7	chr20	33933562	33933801	(30510366)	+	MLT1H	LTR/ERVL-MaLR	12	321	(228)	2311945
1008	27.7	6.1	3.8	chr20	33947611	33947978	(30496189)	C	MamGypLTR3a	LTR/Gypsy	(4)	977	601	2311980
1437	25.9	14.9	5.1	chr20	34300207	34300554	(30143613)	+	L2	LINE/L2	2686	3080	(339)	2312709
16	14.4	2.5	2.4	chr20	35742239	35742278	(28701889)	+	(ACACAC)n	Simple_repeat	1	41	(0)	2315915
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
188	18.5	6.9	0.0	chr20	43668023	43668076	(20776091)	C	MIR	SINE/MIR	(186)	76	19	2331696
5779	20.2	7.5	0.8	chr20	45038682	45040015	(19404152)	C	Charlie1a	DNA/hAT-Charlie	(23)	1432	1	2334903
1089	21.6	1.4	0.0	chr20	45592625	45592837	(18851330)	C	MER20	DNA/hAT-Charlie	(1)	218	3	2335956
2006	23.3	5.2	2.7	chr20	45592841	45592935	(18851232)	C	L1ME3	LINE/L1	(4501)	1741	1640	2335954
226	28.2	5.3	0.0	chr20	45972689	45972785	(18471382)	C	MIR3	SINE/MIR	(97)	171	63	2336666
384	32.1	1.9	4.6	chr20	45995456	45995618	(18448549)	+	L2c	LINE/L2	3251	3424	(2)	2336731
2396	4.7	2.1	0.0	chr20	47442140	47442418	(17001749)	C	AluYf1	SINE/Alu	(6)	305	21	2340085
391	27.6	3.6	0.7	chr20	47442425	47442559	(17001608)	C	MLT1K	LTR/ERVL-MaLR	(193)	402	264	2340086
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
16	18.3	2.2	2.2	chr20	47502034	47502078	(16942089)	+	(AGGCGG)n	Simple_repeat	1	46	(0)	2340297
327	35.5	4.9	0.7	chr20	49219896	49220031	(15224136)	C	L2b	LINE/L2	(5)	3370	3229	2343880
468	29.1	9.7	1.0	chr20	49541895	49542186	(14901981)	C	L2a	LINE/L2	(174)	3252	2933	2344701
14	26.0	0.0	3.7	chr20	49936321	49936374	(14507793)	+	(GCCCCCC)n	Simple_repeat	1	54	(0)	2345668
2032	11.9	3.4	0.0	chr20	50168082	50168366	(14275801)	C	AluJb	SINE/Alu	(17)	295	1	2346253
403	28.8	5.2	5.2	chr20	50168367	50168560	(14275607)	+	MLT1J	LTR/ERVL-MaLR	284	477	(35)	2346254
27	7.9	2.5	0.0	chr20	50818433	50818472	(13625695)	+	(CT)n	Simple_repeat	1	41	(0)	2347820
316	29.1	1.1	0.0	chr20	51564330	51564415	(12879752)	C	MIRb	SINE/MIR	(81)	187	101	2349395
1800	23.8	4.1	6.3	chr20	53125586	53126105	(11318062)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	1	2352835
225	31.9	5.3	2.7	chr20	53606717	53606864	(10837303)	+	MIR	SINE/MIR	10	161	(101)	2353846
635	27.8	6.0	7.9	chr20	53610070	53610460	(10833707)	+	L1ME4c	LINE/L1	272	654	(176)	2353853
735	22.0	7.0	0.6	chr20	53623804	53624019	(10820148)	C	MIR	SINE/MIR	(0)	262	33	2353884
25	13.7	0.0	0.0	chr20	53940209	53940248	(10503919)	+	(A)n	Simple_repeat	1	40	(0)	2354718
429	21.2	0.0	2.3	chr20	56393243	56393329	(8050838)	C	MER34C2	LTR/ERV1	(0)	555	471	2358933
2374	12.7	0.6	0.3	chr20	57163888	57164250	(7279917)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2360679
915	29.2	10.8	6.0	chr20	57164251	57164498	(7279669)	+	MLT1J	LTR/ERVL-MaLR	269	504	(8)	2360678
678	23.9	1.9	6.5	chr20	58087514	58087728	(6356439)	C	Helitron3Na_Mam	RC/Helitron	(0)	486	282	2362372
22	3.9	0.0	0.0	chr20	58893063	58893089	(5551078)	+	(T)n	Simple_repeat	1	27	(0)	2363593
306	25.9	6.9	2.2	chr20	58912633	58912770	(5531397)	C	MamRep1879	DNA/hAT-Tip100?	(64)	152	8	2363607
13	18.4	0.0	0.0	chr20	62822810	62822840	(1621327)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	2368985
18	12.8	0.0	0.0	chr21	14383911	14383944	(32326039)	+	(AAAAAC)n	Simple_repeat	1	34	(0)	2377759
298	26.8	8.2	2.6	chr21	17455482	17455596	(29254387)	C	Tigger15a	DNA/TcMar-Tigger	(139)	576	455	2381630
205	38.5	7.7	3.4	chr21	25421735	25421882	(21288101)	C	L2b	LINE/L2	(81)	3294	3140	2392465
2342	5.7	0.7	0.7	chr21	26084228	26084537	(20625446)	C	AluY	SINE/Alu	(0)	311	1	2393485
2127	11.2	4.7	2.7	chr21	26834994	26835351	(19874632)	+	THE1B	LTR/ERVL-MaLR	1	423	(3)	2394577
1163	25.2	8.8	1.8	chr21	31597734	31598132	(15111851)	+	MLT1G3	LTR/ERVL-MaLR	165	594	(1)	2401689
316	25.8	2.2	0.0	chr21	31645053	31645141	(15064842)	C	MLT1L	LTR/ERVL-MaLR	(26)	584	494	2401811
1002	32.4	7.4	4.2	chr21	31781528	31782366	(14927617)	+	L2b	LINE/L2	2334	3248	(139)	2402074
2000	14.8	6.0	1.7	chr21	33200016	33200365	(13509618)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	24	2404490
470	26.4	19.1	4.4	chr21	34635350	34635757	(12074226)	C	LTR16C	LTR/ERVL	(1)	488	7	2406944
18	20.1	2.5	0.0	chr21	35047947	35047986	(11661997)	+	(AC)n	Simple_repeat	1	41	(0)	2407532
280	29.6	7.4	0.0	chr21	35940589	35940676	(10769307)	C	L2a	LINE/L2	(5)	3421	3327	2408868
1983	14.8	0.0	2.2	chr21	36210226	36210364	(10499619)	+	AluSx1	SINE/Alu	1	138	(174)	2409373
203	33.5	2.8	3.4	chr21	36939387	36939565	(9770418)	+	MER5A	DNA/hAT-Charlie	7	184	(5)	2410693
2688	23.6	13.1	2.6	chr21	37026707	37027603	(9682380)	C	Charlie7	DNA/hAT-Charlie	(1201)	1411	406	2410886
13	21.7	0.0	0.0	chr21	37366867	37366898	(9343085)	+	(GGC)n	Simple_repeat	1	32	(0)	2411469
631	22.1	8.5	0.6	chr21	37700727	37700899	(9009084)	+	MER91B	DNA/hAT-Tip100	1	188	(2)	2411999
588	36.0	6.9	3.6	chr21	37700900	37701317	(9008666)	C	L2b	LINE/L2	(809)	2610	2168	2411998
2669	26.3	3.7	1.6	chr21	37929944	37930781	(8779202)	+	L1ME1	LINE/L1	5320	6176	(3)	2412305
45	4.8	1.4	2.9	chr21	37987411	37987429	(8722554)	+	(ATCT)n	Simple_repeat	1	18	(0)	2412403
53	8.7	0.0	0.0	chr21	37987430	37987504	(8722479)	+	(TATG)n	Simple_repeat	1	75	(0)	2412404
1805	12.8	1.1	0.0	chr21	39349731	39349988	(7359995)	C	AluJb	SINE/Alu	(22)	290	30	2414412
711	24.1	11.2	4.2	chr21	45353220	45353574	(1356409)	+	MLT1B	LTR/ERVL-MaLR	2	384	(6)	2422774
3854	19.6	6.8	1.3	chr22	21712805	21713750	(29104718)	+	L1MB3	LINE/L1	5169	6177	(6)	2435735
28	14.3	1.5	4.4	chr22	21938582	21938648	(28879820)	+	A-rich	Low_complexity	1	68	(0)	2436249
30409	18.9	4.2	4.4	chr22	23538730	23546008	(27272460)	+	HERVK-int	LTR/ERVK	1	7267	(269)	2438464
2078	20.6	13.8	1.4	chr22	24465688	24466169	(26352299)	+	MLT1F2	LTR/ERVL-MaLR	1	551	(9)	2440076
242	33.1	2.7	4.0	chr22	24938825	24938847	(25879621)	C	MER5A	DNA/hAT-Charlie	(6)	183	163	2441034
709	28.6	3.2	0.0	chr22	24938848	24939029	(25879439)	+	MER91B	DNA/hAT-Tip100	2	189	(1)	2441035
962	30.3	6.8	2.9	chr22	26401712	26402213	(24416255)	+	MLT1K	LTR/ERVL-MaLR	35	593	(2)	2444260
256	30.5	9.1	4.5	chr22	26503238	26503457	(24315011)	+	L2a	LINE/L2	3026	3256	(170)	2444460
1977	15.9	0.0	1.6	chr22	28631511	28631825	(22186643)	C	AluJo	SINE/Alu	(2)	310	1	2448824
4100	17.6	1.7	1.8	chr22	28740208	28740794	(22077674)	+	LTR62	LTR/ERVL	117	704	(5)	2449079
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
1247	13.3	4.1	1.4	chr22	29080704	29080916	(21737552)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2449845
13	14.0	0.0	5.7	chr22	29306273	29306307	(21512161)	+	(GCCCA)n	Simple_repeat	1	35	(0)	2450301
561	16.2	24.9	0.0	chr22	30444853	30444994	(20373474)	+	MER53	DNA/hAT	5	193	(0)	2452623
39	5.8	1.9	0.0	chr22	37317079	37317132	(13501336)	+	(GGCTGGACAG)n	Simple_repeat	1	55	(0)	2466968
513	27.5	13.2	1.2	chr22	37904995	37905167	(12913301)	C	MIRb	SINE/MIR	(52)	216	20	2468376
232	26.5	14.6	0.8	chr22	37933800	37933917	(12884551)	C	MIR3	SINE/MIR	(65)	143	7	2468446
786	13.9	0.0	1.7	chr22	38033076	38033190	(12785278)	+	AluJb	SINE/Alu	200	312	(0)	2468662
328	26.5	9.3	7.0	chr22	38655784	38655941	(12162527)	+	MIRc	SINE/MIR	5	166	(102)	2470027
216	31.3	8.2	7.4	chr22	38655927	38656047	(12162421)	+	MIRb	SINE/MIR	26	147	(121)	2470028
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
13	14.7	3.3	0.0	chr22	39520440	39520469	(11297999)	+	G-rich	Low_complexity	1	31	(0)	2471815
27	18.0	0.0	0.0	chr22	40177925	40177974	(10640494)	+	GA-rich	Low_complexity	1	50	(0)	2473082
403	35.7	5.8	3.0	chr22	40347027	40347260	(10471208)	C	MIRb	SINE/MIR	(22)	246	6	2473379
1445	14.7	0.0	0.0	chr22	40923017	40923227	(9895241)	+	AluJr	SINE/Alu	87	297	(15)	2474671
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
1856	16.5	1.4	0.7	chr22	41501011	41501301	(9317167)	C	AluJb	SINE/Alu	(19)	293	1	2476069
226	26.2	9.1	1.2	chr22	41501306	41501386	(9317082)	+	MIRc	SINE/MIR	87	174	(94)	2476070
196	32.7	0.0	0.0	chr22	41501385	41501436	(9317032)	C	L2b	LINE/L2	(35)	3340	3289	2476071
204	30.6	1.8	4.4	chr22	41845930	41846042	(8972426)	C	L2c	LINE/L2	(243)	3144	3035	2476908
2261	9.8	3.5	1.6	chr22	42421169	42421474	(8396994)	+	AluSq2	SINE/Alu	1	312	(1)	2478016
409	25.8	10.0	8.6	chr22	42649681	42650045	(8168423)	+	L2a	LINE/L2	2986	3411	(15)	2478572
2308	24.6	10.2	5.0	chr22	43707178	43708124	(7110344)	+	L1MEd	LINE/L1	1004	2024	(5079)	2480652
253	29.2	10.3	0.3	chr22	45309271	45309435	(5509033)	C	L2b	LINE/L2	(13)	3413	3214	2483677
33	19.3	0.0	3.7	chr22	45671955	45672036	(5146432)	+	(CCT)n	Simple_repeat	1	82	(0)	2484358
212	34.1	9.6	0.6	chr22	46798601	46798780	(4019688)	C	L2b	LINE/L2	(20)	3355	3158	2486081
12	13.9	6.2	0.0	chr22	50343231	50343283	(475185)	+	(CCCCG)n	Simple_repeat	1	56	(0)	2490488
13	0.0	4.3	4.2	chr3	4467162	4467184	(193828375)	+	(CAG)n	Simple_repeat	1	24	(0)	2499047
380	25.4	5.1	0.8	chr3	4976236	4976366	(193319193)	+	MER91C	DNA/hAT-Tip100	1	137	(3)	2499889
392	26.2	7.6	4.3	chr3	4976371	4976538	(193319021)	+	MIRb	SINE/MIR	16	191	(17)	2499890
341	29.7	6.3	8.3	chr3	5030245	5030472	(193265087)	C	MER102a	DNA/hAT-Charlie	(1)	329	107	2500021
232	17.1	3.8	8.4	chr3	11321695	11321777	(186973782)	+	MIRb	SINE/MIR	113	191	(77)	2511241
448	28.6	6.4	1.1	chr3	12442922	12443098	(185852461)	+	MIRb	SINE/MIR	35	221	(47)	2513263
365	22.8	2.5	0.0	chr3	13891826	13891904	(184403655)	+	MLT1J	LTR/ERVL-MaLR	99	179	(333)	2516108
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
1183	17.5	4.2	0.5	chr3	17686732	17686938	(180608621)	+	MER20	DNA/hAT-Charlie	5	219	(0)	2522207
1601	34.1	7.3	4.9	chr3	23443952	23445603	(174849956)	C	ERVL-E-int	LTR/ERVL	(495)	5172	3610	2530160
1116	23.0	7.3	5.2	chr3	23668794	23669142	(174626417)	+	Arthur1	DNA/hAT-Tip100	1	357	(3590)	2530500
1723	14.2	6.5	2.0	chr3	23740798	23741092	(174554467)	C	AluJb	SINE/Alu	(3)	309	1	2530664
203	30.3	10.3	9.6	chr3	23761484	23761618	(174533941)	C	MIR3	SINE/MIR	(60)	148	13	2530712
730	25.2	19.1	1.6	chr3	23915502	23916073	(174379486)	+	L2a	LINE/L2	2731	3426	(0)	2531001
384	25.5	13.7	2.5	chr3	23987028	23987228	(174308331)	C	MLT1L	LTR/ERVL-MaLR	(180)	430	204	2531144
257	33.5	3.2	1.9	chr3	24863143	24863297	(173432262)	C	MamSINE1	SINE/tRNA-RTE	(132)	158	2	2532535
264	32.8	7.9	0.0	chr3	29412831	29412946	(168882613)	C	L2c	LINE/L2	(234)	3153	3028	2539132
14	15.9	0.0	0.0	chr3	33426304	33426331	(164869228)	+	(CAG)n	Simple_repeat	1	28	(0)	2545839
232	27.5	10.3	4.4	chr3	42803364	42803500	(155492059)	C	MER5A	DNA/hAT-Charlie	(9)	180	35	2559686
402	21.2	0.0	1.2	chr3	43155994	43156079	(155139480)	C	MIR3	SINE/MIR	(15)	193	109	2560227
713	0.0	0.0	0.0	chr3	45688998	45689071	(152606488)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	2564290
234	32.1	10.7	7.1	chr3	46955278	46955629	(151339930)	C	L2c	LINE/L2	(5)	3382	3017	2566167
2420	11.0	0.0	0.0	chr3	60937552	60937861	(137357698)	C	AluSg	SINE/Alu	(0)	310	1	2589750
1105	31.5	4.2	5.9	chr3	61063940	61064552	(137231007)	+	MLT1L	LTR/ERVL-MaLR	1	602	(8)	2589949
308	31.8	9.3	2.1	chr3	61739752	61739989	(136555570)	C	MER102b	DNA/hAT-Charlie	(0)	341	85	2591163
401	28.4	12.0	0.0	chr3	64463677	64463859	(133831700)	C	LTR50	LTR/ERVL	(586)	209	2	2595787
550	28.3	10.2	8.8	chr3	65811398	65811850	(132483709)	+	MLT1O	LTR/ERVL-MaLR	34	493	(49)	2598061
698	28.6	5.5	0.0	chr3	66397836	66398024	(131897535)	+	MER58A	DNA/hAT-Charlie	2	201	(23)	2599167
15454	12.9	3.5	1.2	chr3	98481510	98484019	(99811540)	C	L1PA7	LINE/L1	(4289)	2574	5	2638995
198	21.0	3.1	6.1	chr3	99777827	99777892	(98517667)	C	AmnSINE1	SINE/5S-Deu-L2	(16)	559	496	2640692
219	27.0	3.9	13.0	chr3	100403417	100403467	(97892092)	+	MIR1_Amn	SINE/MIR	4	49	(181)	2641668
1855	11.1	9.1	0.4	chr3	100403468	100403737	(97891822)	C	AluSq2	SINE/Alu	(16)	297	2	2641669
1592	25.4	7.2	2.5	chr3	101882760	101883227	(96412332)	+	MLT1G1	LTR/ERVL-MaLR	56	574	(5)	2643751
301	26.3	8.0	6.1	chr3	114155531	114155695	(84139864)	C	MER91A	DNA/hAT-Tip100	(20)	176	18	2660374
460	20.1	15.3	7.8	chr3	123962544	123962885	(74332674)	C	L1ME4a	LINE/L1	(22)	6102	5944	2674570
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
3322	16.0	3.0	0.0	chr3	126693107	126693645	(71601914)	+	MER41D	LTR/ERV1	1	556	(1)	2678947
665	28.9	7.2	1.3	chr3	127428645	127428879	(70866680)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	346	2680017
304	29.9	16.9	1.1	chr3	128618271	128618449	(69677110)	C	MIR	SINE/MIR	(29)	233	21	2682054
623	30.0	8.8	2.0	chr3	128863770	128864014	(69431545)	C	MIRb	SINE/MIR	(0)	268	6	2682570
39	23.9	3.3	2.4	chr3	133437571	133437691	(64857868)	+	GA-rich	Low_complexity	1	125	(0)	2689887
541	21.4	10.3	0.7	chr3	140911059	140911199	(57384360)	C	LTR33A	LTR/ERVL	(306)	197	42	2701498
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
36	16.3	3.1	4.0	chr3	149970880	149970975	(48324584)	+	(GCG)n	Simple_repeat	1	99	(0)	2714495
320	23.1	14.9	1.1	chr3	169262297	169262388	(29033171)	+	L2b	LINE/L2	3060	3166	(209)	2741129
657	28.5	7.3	0.9	chr3	182513715	182513944	(15781615)	+	MIRb	SINE/MIR	23	268	(0)	2761145
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
2549	25.8	7.8	6.2	chr3	185837228	185838591	(12456968)	C	L1MC4	LINE/L1	(1898)	5984	4616	2767174
2224	7.4	3.9	2.4	chr3	185838601	185838769	(12456790)	+	L1PA13	LINE/L1	5805	5974	(189)	2767183
249	31.5	10.6	9.7	chr3	193589969	193590044	(4705515)	C	Charlie8	DNA/hAT-Charlie	(1978)	450	373	2779737
3629	17.3	11.3	0.6	chr3	193590045	193590775	(4704784)	C	LTR8B	LTR/ERV1	(0)	820	1	2779738
14	0.0	0.0	0.0	chr3	196432404	196432421	(1863138)	+	(CCG)n	Simple_repeat	1	18	(0)	2784995
442	30.1	15.7	7.0	chr3	196572207	196572899	(1722660)	C	L2b	LINE/L2	(36)	3339	2547	2785319
751	24.2	10.7	3.7	chr3	196838022	196838291	(1457268)	C	LTR86A2	LTR/ERVL	(161)	347	57	2785859
529	34.0	6.2	1.1	chr4	6780267	6780620	(183433935)	C	L2a	LINE/L2	(28)	3398	3026	2799085
2078	22.6	7.2	8.5	chr4	15677257	15678023	(174536532)	+	MER21C	LTR/ERVL	9	857	(81)	2813050
679	25.8	12.1	4.1	chr4	26140314	26140556	(164073999)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	321	2830454
585	24.2	22.5	11.7	chr4	40924343	40924848	(149289707)	+	MLT1G1	LTR/ERVL-MaLR	3	579	(0)	2853122
16	0.0	0.0	0.0	chr4	74377159	74377175	(115837380)	+	(A)n	Simple_repeat	1	17	(0)	2896095
16	0.0	0.0	0.0	chr4	76758458	76758474	(113456081)	+	(A)n	Simple_repeat	1	17	(0)	2899793
23932	10.1	2.4	0.9	chr4	83506441	83509926	(106704629)	C	HERVH48-int	LTR/ERV1	(2532)	4122	586	2909669
1313	22.8	12.4	9.8	chr4	86922421	86922950	(103291605)	+	LTR41C	LTR/ERVL	1	555	(146)	2914618
1449	21.1	10.9	1.6	chr4	89158538	89158985	(101055570)	+	Charlie4a	DNA/hAT-Charlie	14	508	(0)	2918219
991	17.5	15.2	4.8	chr4	90958626	90958877	(99255678)	+	MLT1A0	LTR/ERVL-MaLR	83	365	(0)	2920621
1260	30.5	6.5	3.5	chr4	108224304	108224962	(81989593)	C	L4_A_Mam	LINE/RTE-X	(3101)	1889	1210	2943131
1725	22.3	9.1	0.8	chr4	108282868	108283350	(81931205)	+	L1MC5	LINE/L1	8350	8876	(428)	2943231
3131	19.9	3.8	7.3	chr4	113740831	113741588	(76472967)	+	MER44C	DNA/TcMar-Tigger	2	732	(1)	2951224
276	24.6	0.0	1.7	chr4	126604547	126604604	(63609951)	C	L2a	LINE/L2	(13)	3413	3357	2968013
796	32.2	4.9	2.2	chr4	128601304	128601662	(61612893)	C	MamRTE1	LINE/RTE-BovB	(331)	3481	3113	2970966
11170	21.4	4.7	2.9	chr4	141703757	141707791	(48506764)	C	L1MA6	LINE/L1	(1693)	5869	2062	2988026
465	26.9	3.3	1.4	chr4	142551118	142551264	(47663291)	+	MLT1K	LTR/ERVL-MaLR	1	150	(445)	2989100
1191	14.9	1.4	7.4	chr4	143375734	143375964	(46838591)	C	MER20	DNA/hAT-Charlie	(2)	217	1	2990237
365	32.5	14.5	4.1	chr4	185926048	185926538	(4288017)	C	L2c	LINE/L2	(436)	2983	2433	3048932
208	39.2	4.5	0.0	chr4	186202123	186202229	(4012326)	+	MIR3	SINE/MIR	46	157	(51)	3049343
907	25.8	10.8	4.7	chr4	186216614	186216975	(3997580)	C	MLT1E2	LTR/ERVL-MaLR	(177)	450	64	3049361
23124	11.8	1.4	0.0	chr4	190108264	190111540	(103015)	C	HERVK-int	LTR/ERVK	(1208)	6328	3007	3054628
421	15.2	0.0	0.0	chr5	5523237	5523302	(176014957)	+	MER41C	LTR/ERV1	1	66	(455)	3060644
326	9.5	0.0	0.0	chr5	5523299	5523340	(176014919)	+	MER41C	LTR/ERV1	25	66	(455)	3060644
329	7.0	2.3	0.0	chr5	5523335	5523377	(176014882)	+	MER41C	LTR/ERV1	23	66	(455)	3060644
261	8.3	2.7	0.0	chr5	5523374	5523409	(176014850)	+	MER41C	LTR/ERV1	25	61	(460)	3060644
3768	8.0	1.4	0.0	chr5	5523410	5523899	(176014360)	+	MER41C	LTR/ERV1	25	521	(0)	3060644
3436	14.2	6.5	2.2	chr5	7902833	7903435	(173634824)	C	MER41B	LTR/ERV1	(1)	633	3	3063720
629	27.6	6.6	4.2	chr5	7903436	7903587	(173634672)	C	L2a	LINE/L2	(396)	3030	2867	3063719
661	30.7	1.5	11.5	chr5	14110811	14111115	(167427144)	+	MLT1J	LTR/ERVL-MaLR	156	429	(83)	3071796
12	26.1	2.2	2.2	chr5	14143247	14143291	(167394968)	+	(CTTTC)n	Simple_repeat	1	46	(0)	3071857
231	13.3	2.2	2.2	chr5	17356100	17356145	(164182114)	C	THE1B	LTR/ERVL-MaLR	(0)	381	336	3076703
956	11.6	9.3	0.0	chr5	17356127	17356273	(164181986)	C	THE1B	LTR/ERVL-MaLR	(202)	162	1	3076703
18	21.1	0.0	4.0	chr5	17356275	17356324	(164181935)	+	(ACAT)n	Simple_repeat	1	50	(0)	3076704
2083	17.8	3.1	4.2	chr5	18745564	18746014	(162792245)	C	HERV17-int	LTR/ERV1	(8164)	462	17	3078459
697	19.6	6.4	4.1	chr5	31638707	31638903	(149899356)	+	MamRep488	DNA/hAT-Tip100	15	216	(3)	3095274
2478	17.2	0.5	1.8	chr5	32093459	32093695	(149444564)	C	Tigger2a	DNA/TcMar-Tigger	(2)	432	195	3096156
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
761	33.3	8.5	2.2	chr5	33236938	33237302	(148300957)	C	LTR33	LTR/ERVL	(35)	480	91	3098028
514	26.7	2.4	2.9	chr5	34577328	34577497	(146960762)	+	MER45A	DNA/hAT-Tip100	10	178	(0)	3100028
4179	12.2	1.4	2.5	chr5	34626142	34626811	(146911448)	+	Tigger3b	DNA/TcMar-Tigger	1	662	(569)	3100125
203	30.5	8.5	0.8	chr5	36739735	36739853	(144798406)	C	L2c	LINE/L2	(85)	3302	3174	3103270
255	30.9	0.0	0.0	chr5	36739925	36739992	(144798267)	C	Plat_L3	LINE/CR1	(244)	3342	3275	3103271
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
1185	23.2	7.7	4.4	chr5	36935639	36936026	(144602233)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	66	3103570
1641	23.6	4.3	1.6	chr5	38426546	38426975	(143111284)	C	MLT1J2	LTR/ERVL-MaLR	(6)	442	1	3106114
247	32.1	9.4	9.1	chr5	38535242	38535394	(143002865)	+	L2c	LINE/L2	3079	3222	(165)	3106252
3975	13.1	2.3	2.5	chr5	38660105	38660746	(142877513)	+	LTR9D	LTR/ERV1	5	645	(0)	3106453
14432	14.2	2.0	3.8	chr5	43571513	43574022	(137964237)	C	LTR49-int	LTR/ERV1	(87)	6244	3774	3113279
266	28.6	5.2	0.0	chr5	52007368	52007458	(129530801)	C	AmnSINE1	SINE/5S-Deu-L2	(368)	207	112	3118457
446	33.6	11.4	0.8	chr5	53433422	53433664	(128104595)	+	LFSINE_Vert	SINE/tRNA	1	272	(187)	3120254
12	14.6	0.0	5.9	chr5	55308084	55308117	(126230142)	+	A-rich	Low_complexity	1	34	(0)	3123045
1456	20.4	12.6	1.7	chr5	56113144	56113647	(125424612)	+	Charlie1	DNA/hAT-Charlie	1442	1897	(884)	3124490
17	15.0	4.3	2.1	chr5	57173958	57174003	(124364256)	+	(CTCC)n	Simple_repeat	1	48	(0)	3126300
466	32.3	9.7	1.3	chr5	60688357	60688582	(120849677)	+	MIRb	SINE/MIR	21	267	(1)	3131181
368	33.6	0.7	0.0	chr5	61328849	61328985	(120209274)	C	L2c	LINE/L2	(227)	3160	3023	3132102
224	34.0	6.4	1.6	chr5	61329091	61329284	(120208975)	C	L2c	LINE/L2	(531)	2888	2685	3132102
13	9.3	0.0	0.0	chr5	61334774	61334796	(120203463)	+	(TTTG)n	Simple_repeat	1	23	(0)	3132111
438	29.0	11.2	3.4	chr5	62082000	62082327	(119455932)	+	MamRep434	DNA/TcMar-Tigger	68	424	(2)	3133171
185	30.0	7.2	11.8	chr5	65722782	65722883	(115815376)	C	OldhAT1	DNA/hAT-Ac	(2353)	495	399	3138301
344	28.2	7.2	6.7	chr5	66436749	66436942	(115101317)	+	LTR33A	LTR/ERVL	1	195	(308)	3139436
311	34.4	11.0	0.9	chr5	66633155	66633488	(114904771)	+	L4_A_Mam	LINE/RTE-X	4019	4390	(600)	3139726
1656	14.9	1.4	2.8	chr5	71693728	71694011	(109844248)	C	L1MB2	LINE/L1	(1)	6170	5891	3147922
820	28.0	6.7	6.1	chr5	72014954	72015410	(109522849)	C	MLT1J	LTR/ERVL-MaLR	(52)	460	1	3148378
1577	14.1	0.4	9.2	chr5	73311058	73311362	(108226897)	C	AluJr4	SINE/Alu	(29)	283	6	3150304
354	27.3	3.9	9.0	chr5	74871023	74871211	(106667048)	+	MLT1J	LTR/ERVL-MaLR	239	417	(95)	3152634
1489	15.2	6.2	0.0	chr5	76690588	76690889	(104847370)	C	MER33	DNA/hAT-Charlie	(2)	322	1	3155411
452	29.9	11.9	5.3	chr5	76690904	76691129	(104847130)	C	MIR	SINE/MIR	(19)	243	1	3155412
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
5775	22.3	10.0	4.5	chr5	79481263	79481938	(102056321)	+	L1MEc	LINE/L1	56	772	(5628)	3159810
395	31.5	2.2	0.3	chr5	79556390	79556524	(101981735)	C	MIR3	SINE/MIR	(1)	207	76	3159964
808	27.7	8.1	4.2	chr5	80248634	80249032	(101289227)	+	Tigger8	DNA/TcMar-Tigger	220	638	(29)	3161162
1395	12.6	4.4	5.0	chr5	80512810	80512931	(101025328)	+	Ricksha_c	DNA/MULE-MuDR	1915	2035	(13)	3161713
494	15.8	1.6	0.3	chr5	80512834	80512958	(101025301)	C	Ricksha_c	DNA/MULE-MuDR	(1021)	160	32	3161715
360	16.9	14.4	0.0	chr5	80512900	80512976	(101025283)	+	Ricksha_c	DNA/MULE-MuDR	1959	2048	(0)	3161716
288	30.5	1.8	1.1	chr5	81427753	81427909	(100110350)	C	MER5A	DNA/hAT-Charlie	(0)	189	23	3163145
422	26.2	6.1	0.9	chr5	81427943	81428050	(100110209)	+	L2b	LINE/L2	3262	3375	(0)	3163146
572	30.4	1.2	1.2	chr5	83197384	83197553	(98340706)	+	UCON1	Unknown	67	236	(1150)	3165636
739	31.6	10.3	1.8	chr5	84290013	84290411	(97247848)	+	LTR16	LTR/ERVL	1	437	(1)	3167047
2700	30.9	7.6	2.1	chr5	99900253	99901357	(81636902)	C	ERVL-E-int	LTR/ERVL	(1258)	4396	3162	3187045
510	25.3	10.1	4.8	chr5	107624564	107624854	(73913405)	C	UCON40	Unknown	(6)	309	2	3196582
2397	18.1	12.8	1.2	chr5	112742357	112742858	(68795401)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3203214
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
346	34.0	0.0	0.0	chr5	115625082	115625175	(65913084)	C	L3	LINE/CR1	(55)	4044	3951	3207057
1521	25.0	7.7	5.3	chr5	116948068	116948637	(64589622)	C	L1MCc	LINE/L1	(5817)	606	22	3208918
670	27.2	12.8	5.6	chr5	119105934	119106436	(62431823)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	5	3211855
1310	25.0	7.2	2.1	chr5	122581455	122581886	(58956373)	C	LTR16B1	LTR/ERVL	(5)	475	1	3216093
23	24.6	0.0	0.0	chr5	123155232	123155284	(58382975)	+	(TT)n	Simple_repeat	1	53	(0)	3216996
16	9.7	0.0	0.0	chr5	124179898	124179919	(57358340)	+	(T)n	Simple_repeat	1	22	(0)	3218326
6099	14.3	5.1	2.9	chr5	125054768	125055595	(56482664)	C	Tigger3b	DNA/TcMar-Tigger	(387)	844	1	3219562
679	28.9	5.0	0.0	chr5	125277750	125277995	(56260264)	+	MIR	SINE/MIR	4	262	(0)	3219843
182	21.6	5.5	0.0	chr5	127988432	127988482	(53549777)	+	MamRTE1	LINE/RTE-BovB	1344	1397	(2415)	3223579
454	28.5	6.9	3.4	chr5	128437180	128437418	(53100841)	+	L1ME3F	LINE/L1	5685	5939	(304)	3224142
318	27.8	9.0	2.6	chr5	134070788	134070942	(47467317)	C	L1ME4a	LINE/L1	(383)	5741	5576	3231891
1786	21.9	4.8	13.3	chr5	135290033	135290581	(46247678)	+	MLT1F2	LTR/ERVL-MaLR	7	506	(54)	3234114
965	20.7	5.0	4.6	chr5	138180272	138180489	(43357770)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3238295
2164	20.0	9.3	3.2	chr5	139263489	139263994	(42274265)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	3240435
1013	14.6	0.0	0.0	chr5	139275659	139275802	(42262457)	+	AluJb	SINE/Alu	136	279	(33)	3240469
286	24.5	9.1	7.7	chr5	139275803	139275906	(42262353)	C	MIR	SINE/MIR	(68)	162	45	3240468
821	15.1	2.5	3.0	chr5	139844298	139844495	(41693764)	C	Charlie7a	DNA/hAT-Charlie	(30)	242	46	3241614
273	31.6	3.0	0.0	chr5	140363175	140363272	(41174987)	+	MIRc	SINE/MIR	31	131	(137)	3242460
196	22.9	2.0	0.0	chr5	140700414	140700461	(40837798)	C	MamRTE1	LINE/RTE-BovB	(3740)	72	24	3243091
695	12.5	1.8	0.0	chr5	140711450	140711561	(40826698)	+	L1MC3	LINE/L1	6747	6860	(925)	3243113
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
2288	12.8	0.9	3.2	chr5	142080569	142080915	(39457344)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3245204
285	31.6	7.3	8.7	chr5	142080921	142081197	(39457062)	+	MLT1O	LTR/ERVL-MaLR	266	538	(4)	3245205
499	27.2	12.7	1.0	chr5	142932372	142932579	(38605680)	C	LTR89	LTR/ERVL?	(228)	651	416	3246915
419	31.7	8.8	7.6	chr5	146425845	146426237	(35112022)	C	MLT1O	LTR/ERVL-MaLR	(5)	537	140	3252564
226	30.9	6.0	5.3	chr5	146565913	146566045	(34972214)	C	MLT1O	LTR/ERVL-MaLR	(404)	138	5	3252789
1152	27.3	12.7	1.6	chr5	149355538	149356015	(32182244)	+	MLT1G1	LTR/ERVL-MaLR	5	571	(8)	3257557
287	27.9	7.9	0.8	chr5	149431122	149431251	(32107008)	+	MamRep564	Unknown	123	262	(95)	3257721
42	0.0	0.0	0.0	chr5	149431328	149431363	(32106896)	+	(AC)n	Simple_repeat	1	36	(0)	3257722
501	14.1	7.6	0.0	chr5	150450124	150450208	(31088051)	+	FLAM_A	SINE/Alu	10	101	(41)	3259966
754	18.8	9.9	1.3	chr5	154180375	154180530	(27357729)	C	MER5B	DNA/hAT-Charlie	(0)	178	8	3266592
272	34.6	4.2	5.4	chr5	159341792	159341959	(22196300)	C	MIR1_Amn	SINE/MIR	(0)	230	65	3275939
304	29.3	11.2	2.6	chr5	167723274	167723430	(13814829)	+	L2b	LINE/L2	2912	3083	(343)	3288764
509	29.5	10.9	1.1	chr5	167723412	167723746	(13814513)	+	L2a	LINE/L2	2741	3117	(309)	3288765
2191	24.7	10.3	8.9	chr5	170860074	170861267	(10676992)	+	L1MEg	LINE/L1	434	1652	(4524)	3294422
691	23.9	4.2	4.7	chr5	171273387	171273601	(10264658)	C	MER102a	DNA/hAT-Charlie	(0)	330	117	3294946
897	23.1	2.7	2.3	chr5	173316137	173316357	(8221902)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	3299405
310	31.1	15.0	0.9	chr5	176934841	176935051	(4603208)	+	MLT1K	LTR/ERVL-MaLR	340	585	(10)	3306242
3062	23.1	7.9	0.2	chr5	177024952	177025973	(4512286)	C	L1ME1	LINE/L1	(11)	6168	5050	3306455
1455	12.7	6.4	0.8	chr5	178625214	178625450	(2912809)	+	AluJb	SINE/Alu	60	310	(2)	3309510
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
667	0.0	0.0	0.0	chr5	181221979	181222051	(316208)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	3313889
17	8.9	0.0	0.0	chr6	787214	787237	(170018742)	+	(T)n	Simple_repeat	1	24	(0)	3315246
487	34.9	0.0	0.0	chr6	1291201	1291352	(169514627)	C	MIR3	SINE/MIR	(10)	198	47	3315896
207	29.1	5.2	8.3	chr6	4351943	4352062	(166453917)	C	MamTip2	DNA/hAT-Tip100	(79)	226	111	3320308
334	31.7	1.9	0.0	chr6	5030818	5030921	(165775058)	+	MER3	DNA/hAT-Charlie	1	106	(103)	3321390
711	32.4	3.9	0.8	chr6	5151618	5151863	(165654116)	+	MIRb	SINE/MIR	5	258	(10)	3321608
327	33.1	7.4	3.5	chr6	5151899	5152067	(165653912)	+	L2b	LINE/L2	3199	3374	(1)	3321609
463	30.1	4.9	2.3	chr6	13006695	13006871	(157799108)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	228	3333560
355	20.3	1.4	0.0	chr6	13006929	13006997	(157798982)	C	MLT1I	LTR/ERVL-MaLR	(337)	74	5	3333560
3188	10.7	11.8	0.9	chr6	13765763	13766290	(157039689)	C	LTR59	LTR/ERV1	(4)	593	1	3334859
701	24.3	11.6	1.8	chr6	13766391	13766616	(157039363)	+	MLT1L	LTR/ERVL-MaLR	360	610	(0)	3334860
630	27.4	11.3	4.9	chr6	13913744	13914195	(156891784)	+	MLT1L	LTR/ERVL-MaLR	122	606	(4)	3335149
1641	17.8	3.1	4.5	chr6	14972687	14973016	(155832963)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	84	3336905
935	22.0	15.4	2.7	chr6	15754017	15754569	(155051410)	C	MLT2F	LTR/ERVL	(0)	663	3	3338386
4447	16.9	2.5	1.8	chr6	18242383	18243110	(152562869)	+	MER44C	DNA/TcMar-Tigger	1	733	(0)	3342698
619	27.2	16.1	6.9	chr6	18346814	18347148	(152458831)	+	MLT1J	LTR/ERVL-MaLR	1	372	(140)	3342925
1559	17.6	10.6	0.3	chr6	20431800	20432130	(150373849)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	19	3346034
241	18.6	0.0	0.0	chr6	21908300	21908342	(148897637)	C	UCON2	DNA?	(125)	460	418	3348520
11	21.7	0.0	2.9	chr6	25489718	25489752	(145316227)	+	(CCTTTT)n	Simple_repeat	1	35	(0)	3353708
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
1469	15.3	16.4	4.6	chr6	26474096	26474464	(144331515)	+	MER57C2	LTR/ERV1	14	434	(0)	3355296
379	25.5	11.7	3.6	chr6	26537048	26537250	(144268729)	+	L2a	LINE/L2	3181	3386	(1)	3355426
514	2.7	0.0	18.0	chr6	26594874	26594962	(144211017)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3355542
1499	16.9	8.9	0.5	chr6	27078759	27079066	(143726913)	+	MER61B	LTR/ERV1	1	427	(0)	3356253
1577	6.7	0.0	0.0	chr6	27548668	27548846	(143257133)	+	AluYh3	SINE/Alu	133	311	(0)	3357095
2218	25.6	10.7	2.7	chr6	27565658	27566630	(143239349)	C	FordPrefect	DNA/hAT-Tip100	(464)	1219	4	3357125
749	0.0	0.0	0.0	chr6	28213037	28213118	(142592861)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3358258
30	0.0	0.0	0.0	chr6	33789334	33789362	(137016617)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3367133
8454	3.4	0.0	0.1	chr6	34719460	34720428	(136085551)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3369011
1174	27.9	3.1	2.7	chr6	35171530	35171941	(135634038)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	99	3369838
299	33.2	11.0	2.3	chr6	36341173	36341309	(134464670)	C	MIRb	SINE/MIR	(13)	255	106	3372285
287	25.3	2.5	0.0	chr6	36342637	36342731	(134463248)	C	MLT1L	LTR/ERVL-MaLR	(343)	267	113	3372290
1146	26.4	4.2	5.8	chr6	36672077	36672510	(134133469)	+	LTR16	LTR/ERVL	12	438	(0)	3373062
207	30.7	3.8	9.0	chr6	36960988	36961098	(133844881)	+	MamTip2	DNA/hAT-Tip100	47	151	(154)	3373651
3212	15.9	0.5	7.6	chr6	37423608	37424237	(133381742)	C	LTR9	LTR/ERV1	(0)	612	24	3374668
3615	16.9	1.5	1.3	chr6	37426706	37427322	(133378657)	C	L1M4c	LINE/L1	(5750)	1817	1200	3374662
569	25.1	5.7	5.3	chr6	37775630	37775873	(133030106)	+	HAL1	LINE/L1	2253	2497	(10)	3375316
650	30.4	12.0	5.5	chr6	37816656	37817020	(132988959)	+	MLT1O	LTR/ERVL-MaLR	1	392	(150)	3375435
242	22.2	10.9	6.2	chr6	37845040	37845076	(132960903)	C	MLT1H1	LTR/ERVL-MaLR	(66)	423	381	3375485
662	23.2	1.5	0.1	chr6	37845060	37845217	(132960762)	C	MLT1H1	LTR/ERVL-MaLR	(346)	203	2	3375485
2237	18.9	6.9	3.6	chr6	41410660	41411192	(129394787)	+	Zaphod3	DNA/hAT-Tip100	14	565	(2058)	3381092
29	0.0	0.0	0.0	chr6	43021676	43021702	(127784277)	+	(GCCGGG)n	Simple_repeat	1	27	(0)	3384539
487	31.8	12.7	0.8	chr6	43403861	43404234	(127401745)	C	MamGypLTR1a	LTR/Gypsy	(4)	780	356	3385282
199	30.3	9.6	8.4	chr6	43518980	43519158	(127286821)	C	L2c	LINE/L2	(1326)	2093	1909	3385497
203	37.1	4.5	0.0	chr6	43930040	43930144	(126875835)	C	MIRc	SINE/MIR	(76)	192	83	3386269
233	31.6	3.8	1.3	chr6	45738298	45738374	(125067605)	+	MamTip2	DNA/hAT-Tip100	21	99	(206)	3389083
228	31.7	10.5	0.0	chr6	52332221	52332450	(118473529)	C	L2c	LINE/L2	(1230)	2189	1933	3398364
2236	8.2	0.4	0.0	chr6	52332474	52332754	(118473225)	C	AluSg7	SINE/Alu	(23)	286	5	3398368
5297	11.4	2.5	0.4	chr6	53823502	53824603	(116981376)	C	L1PREC2	LINE/L1	(0)	6160	5038	3400788
1840	18.8	17.9	0.2	chr6	56760900	56761364	(114044615)	+	MLT1F1	LTR/ERVL-MaLR	1	565	(4)	3404571
391	27.0	2.3	8.7	chr6	71072464	71072601	(99733378)	C	MIR3	SINE/MIR	(67)	141	13	3420090
17471	5.8	0.3	0.0	chr6	73310508	73312783	(97493196)	C	L1PA5	LINE/L1	(1805)	4341	2075	3423115
225	29.9	5.4	7.5	chr6	75605489	75605582	(95200397)	C	L2a	LINE/L2	(221)	3205	3114	3426470
1830	14.6	4.7	0.6	chr6	77368942	77369265	(93436714)	C	LTR1A2	LTR/ERV1	(499)	338	1	3428725
1946	13.7	0.0	2.7	chr6	79601195	79601493	(91204486)	C	AluJb	SINE/Alu	(19)	293	3	3431482
11263	13.6	2.1	2.0	chr6	82006007	82007477	(88798502)	+	L1PA16	LINE/L1	1174	2663	(4190)	3434516
6940	17.6	0.5	1.9	chr6	82458212	82459348	(88346631)	C	L1PA16	LINE/L1	(5715)	1138	18	3435206
268	32.5	8.4	1.2	chr6	82876007	82876252	(87929727)	+	CR1-L3A_Croc	LINE/CR1	3728	3909	(379)	3435729
266	33.1	3.5	6.8	chr6	83067337	83067482	(87738497)	+	MIR3	SINE/MIR	44	184	(24)	3436014
2825	29.1	7.1	2.9	chr6	85080274	85081244	(85724735)	+	HAL1	LINE/L1	385	1397	(1110)	3438617
1693	23.3	8.5	3.5	chr6	85081246	85081668	(85724311)	+	LTR16A	LTR/ERVL	1	446	(5)	3438620
20946	14.1	3.2	2.6	chr6	85096560	85100310	(85705669)	+	L1PB1	LINE/L1	351	4133	(2729)	3438644
2904	16.5	6.2	4.8	chr6	87741986	87742442	(83063537)	C	MLT1F1	LTR/ERVL-MaLR	(1)	568	102	3442116
5263	19.0	6.5	4.6	chr6	87793173	87794273	(83011706)	+	Charlie1a	DNA/hAT-Charlie	110	1234	(221)	3442223
2251	28.1	5.7	2.3	chr6	88002928	88003673	(82802306)	C	MamGypsy2-I	LTR/Gypsy	(3375)	791	19	3442556
1266	14.4	1.8	0.5	chr6	88780891	88781106	(82024873)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3443564
1208	20.6	9.0	0.0	chr6	90599109	90599351	(80206628)	+	Tigger7	DNA/TcMar-Tigger	1	267	(2224)	3446622
552	16.8	4.0	0.0	chr6	90599350	90599444	(80206535)	+	Tigger7	DNA/TcMar-Tigger	2393	2491	(0)	3446623
1889	22.1	8.1	1.7	chr6	98944560	98945024	(71860955)	+	LTR40a	LTR/ERVL	23	519	(0)	3456904
622	30.1	8.5	9.4	chr6	100296867	100297247	(70508732)	C	L2a	LINE/L2	(670)	2749	2373	3458842
1342	26.4	9.3	6.0	chr6	105169897	105170558	(65635421)	C	Charlie13a	DNA/hAT-Charlie	(800)	714	29	3465059
836	14.9	0.0	0.0	chr6	106444862	106444975	(64361004)	+	AluJr	SINE/Alu	11	124	(188)	3466939
1480	21.8	9.4	0.0	chr6	107217208	107217533	(63588446)	+	MLT1D	LTR/ERVL-MaLR	26	385	(120)	3468457
659	23.5	8.1	0.0	chr6	107217582	107217764	(63588215)	+	L1ME4b	LINE/L1	244	441	(2336)	3468458
31	19.1	4.7	1.1	chr6	107490483	107490568	(63315411)	+	(CCGCCA)n	Simple_repeat	1	90	(0)	3468956
25	31.7	1.0	1.9	chr6	107490569	107490584	(63315395)	+	(CCG)n	Simple_repeat	1	103	(0)	3468957
1649	18.2	15.0	0.3	chr6	109024553	109024904	(61781075)	C	MER47B	DNA/TcMar-Tigger	(0)	418	6	3471519
2081	29.0	12.9	3.6	chr6	109025030	109026344	(61779635)	+	L1MEd	LINE/L1	235	1688	(5398)	3471520
984	25.9	14.1	2.4	chr6	109087938	109088361	(61717618)	+	MLT1L	LTR/ERVL-MaLR	70	551	(59)	3471629
1212	21.2	0.9	0.0	chr6	110325259	110325480	(60480499)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	3473483
2499	6.5	0.0	0.3	chr6	110981555	110981863	(59824116)	C	AluSx1	SINE/Alu	(4)	308	1	3474772
662	25.1	6.9	0.5	chr6	111057406	111057609	(59748370)	+	L1ME4b	LINE/L1	592	809	(83)	3474945
628	16.7	0.0	3.6	chr6	111057643	111057754	(59748225)	+	MER2B	DNA/TcMar-Tigger	229	336	(0)	3474946
1209	18.3	0.0	4.0	chr6	111722617	111722844	(59083135)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3476095
897	21.1	0.5	9.5	chr6	111777424	111777664	(59028315)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3476171
828	26.2	15.2	1.4	chr6	111957495	111957839	(58848140)	C	MER20B	DNA/hAT-Charlie	(352)	431	31	3476434
381	25.0	9.8	4.5	chr6	111957857	111958078	(58847901)	C	L2	LINE/L2	(2976)	443	209	3476430
336	29.1	9.1	7.5	chr6	112228449	112228782	(58577197)	C	LTR33	LTR/ERVL	(6)	509	170	3476805
310	30.8	7.4	6.1	chr6	113591729	113591918	(57214061)	C	L2c	LINE/L2	(40)	3347	3168	3478717
351	20.8	0.0	1.4	chr6	113591935	113592007	(57213972)	C	MER20	DNA/hAT-Charlie	(147)	72	1	3478718
596	29.3	4.3	4.7	chr6	114092609	114092651	(56713328)	C	MIR	SINE/MIR	(1)	261	221	3479634
372	37.0	6.7	0.5	chr6	116387573	116387781	(54418198)	+	MIRb	SINE/MIR	2	224	(44)	3482500
679	28.6	8.4	7.3	chr6	116533612	116534220	(54271759)	+	LTR41B	LTR/ERVL	1	747	(11)	3482692
243	29.5	0.0	0.0	chr6	119207625	119207685	(51598294)	+	MIR3	SINE/MIR	142	202	(6)	3486288
388	28.7	4.8	2.2	chr6	119529449	119529590	(51276389)	C	MamGypLTR1c	LTR/Gypsy	(353)	460	315	3486699
384	38.7	5.5	0.0	chr6	123841729	123841883	(46964096)	+	MamRTE1	LINE/RTE-BovB	2160	2323	(1489)	3492237
3639	8.2	2.0	4.9	chr6	125994602	125995155	(44810824)	+	L1PA11	LINE/L1	5637	6174	(0)	3495130
979	16.9	8.9	5.2	chr6	129775166	129775434	(41030545)	C	LTR41B	LTR/ERVL	(421)	280	1	3499920
598	28.2	3.2	1.6	chr6	134124046	134124229	(36681750)	C	MIR	SINE/MIR	(24)	238	52	3506222
567	33.0	11.5	3.1	chr6	135922085	135922537	(34883442)	+	Tigger19b	DNA/TcMar-Tigger	54	549	(1)	3509129
1103	31.8	8.5	3.9	chr6	136403523	136404316	(34401663)	+	L4_C_Mam	LINE/RTE-X	1612	2445	(2693)	3509829
2572	20.2	9.1	0.7	chr6	137665033	137665644	(33140335)	C	LTR65	LTR/ERV1	(0)	669	1	3511791
194	34.0	0.0	0.0	chr6	138801196	138801248	(32004731)	C	L2a	LINE/L2	(0)	3426	3374	3513576
442	20.6	2.1	1.1	chr6	138801249	138801341	(32004638)	+	MLT1F2	LTR/ERVL-MaLR	1	94	(466)	3513577
2490	20.2	1.6	7.4	chr6	140105713	140106295	(30699684)	C	L1MCa	LINE/L1	(5764)	744	196	3515670
11258	12.2	4.0	2.8	chr6	140192462	140193625	(30612354)	+	MER41-int	LTR/ERV1	2856	4837	(1109)	3515770
1787	14.8	0.0	0.0	chr6	140193626	140193881	(30612098)	C	AluSg	SINE/Alu	(3)	307	52	3515771
23788	10.5	4.4	2.9	chr6	140895592	140897497	(29908482)	C	MER61-int	LTR/ERV1	(1)	3340	1408	3516606
3041	18.0	6.0	3.7	chr6	140897539	140898219	(29907760)	C	MER61-int	LTR/ERV1	(4518)	699	2	3516606
514	32.4	1.6	1.6	chr6	143746153	143746334	(27059645)	C	MIR3	SINE/MIR	(4)	204	23	3520366
227	28.0	0.0	0.0	chr6	147642608	147642657	(23163322)	C	MIR3	SINE/MIR	(41)	167	118	3525687
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
375	27.4	7.8	0.7	chr6	149565778	149565931	(21240048)	+	MER5B	DNA/hAT-Charlie	7	172	(6)	3528681
28	24.9	2.0	2.9	chr6	149566288	149566388	(21239591)	+	(CCCGC)n	Simple_repeat	1	100	(0)	3528682
667	23.4	5.2	2.4	chr6	149926343	149926453	(20879526)	C	L1M4	LINE/L1	(715)	5469	5357	3529404
3367	15.0	1.5	0.2	chr6	149926454	149927040	(20878939)	C	MER41E	LTR/ERV1	(0)	595	1	3529405
401	30.2	10.0	2.4	chr6	150515455	150515685	(20290294)	+	MIRb	SINE/MIR	2	253	(15)	3530340
933	24.4	0.0	1.5	chr6	150741820	150742019	(20063960)	C	MER20	DNA/hAT-Charlie	(16)	203	7	3530664
2491	18.1	10.9	0.8	chr6	151386740	151387357	(19418622)	C	Charlie1a	DNA/hAT-Charlie	(0)	1455	768	3531902
542	24.8	1.6	0.0	chr6	151387371	151387495	(19418484)	C	Charlie1a	DNA/hAT-Charlie	(1328)	127	1	3531903
2017	16.7	5.9	0.8	chr6	151475554	151475940	(19330039)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3532065
16	14.9	0.0	0.0	chr6	156778732	156778761	(14027218)	+	(CCG)n	Simple_repeat	1	30	(0)	3539998
854	25.5	10.7	5.8	chr6	157193392	157193898	(13612081)	C	MLT1H2	LTR/ERVL-MaLR	(12)	567	1	3540534
22934	8.5	0.9	1.2	chr6	158178478	158184036	(12621943)	C	L1PA7	LINE/L1	(627)	5527	5	3542081
481	28.4	5.0	1.7	chr6	159716630	159716840	(11089139)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3544482
626	22.1	0.6	3.4	chr6	161042057	161042231	(9763748)	C	MLT1E1	LTR/ERVL-MaLR	(386)	268	50	3546142
235	28.7	3.6	2.7	chr6	161732513	161732623	(9073356)	C	Helitron1Nb_Mam	RC/Helitron	(704)	412	301	3547128
804	12.2	0.0	0.0	chr6	161732625	161732739	(9073240)	C	L1PA15	LINE/L1	(239)	5926	5812	3547129
322	25.7	5.0	0.0	chr6	162905819	162905931	(7900048)	C	MER94	DNA/hAT-Blackjack	(15)	119	1	3548807
1155	25.1	13.0	2.3	chr6	165477105	165477536	(5328443)	+	L2a	LINE/L2	2940	3424	(2)	3552005
310	33.0	9.3	7.4	chr6	166957417	166957859	(3848120)	+	L2a	LINE/L2	2936	3423	(3)	3553814
1127	19.1	3.2	0.0	chr7	7653757	7653965	(151692008)	+	MER20	DNA/hAT-Charlie	4	219	(0)	3571388
15	17.1	0.0	4.7	chr7	8296409	8296451	(151049522)	+	(TTTATTT)n	Simple_repeat	1	43	(0)	3572336
33	0.0	0.0	0.0	chr7	13920442	13920469	(145425504)	+	(GT)n	Simple_repeat	1	28	(0)	3579355
1040	16.5	5.9	1.0	chr7	24587944	24588151	(134757822)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3594132
36	0.0	0.0	0.0	chr7	27140002	27140032	(132205941)	+	(AG)n	Simple_repeat	1	31	(0)	3598050
404	35.2	5.2	0.0	chr7	29205071	29205289	(130140684)	C	X7B_LINE	LINE/CR1	(10)	240	10	3601225
12	15.5	3.3	0.0	chr7	42108725	42108754	(117237219)	+	A-rich	Low_complexity	1	31	(0)	3620759
380	33.1	2.1	9.2	chr7	42108790	42109191	(117236782)	C	L3	LINE/CR1	(1)	4098	3726	3620760
304	32.5	9.9	0.0	chr7	55048549	55048736	(104297237)	+	MIRb	SINE/MIR	8	223	(45)	3638143
191	34.3	1.9	2.9	chr7	65270119	65270223	(94075750)	+	MIR	SINE/MIR	36	139	(123)	3647585
189	30.8	7.1	0.0	chr7	73683366	73683430	(85662543)	+	MamRTE1	LINE/RTE-BovB	857	926	(2886)	3665233
601	23.5	7.0	0.0	chr7	87060138	87060269	(72285704)	+	MIR	SINE/MIR	114	255	(7)	3686721
601	22.4	8.1	0.7	chr7	92293148	92293295	(67052678)	C	MER5B	DNA/hAT-Charlie	(16)	162	3	3693662
1008	18.7	2.9	2.0	chr7	93622085	93622286	(65723687)	C	MER20	DNA/hAT-Charlie	(0)	219	16	3695499
13	11.2	3.2	3.1	chr7	94657531	94657561	(64688412)	+	(AGTGG)n	Simple_repeat	1	32	(0)	3696939
356	28.9	17.4	0.0	chr7	98164399	98164564	(61181409)	+	MIRb	SINE/MIR	59	259	(9)	3702036
434	28.4	4.7	1.2	chr7	99386898	99387061	(59958912)	C	MLT1K	LTR/ERVL-MaLR	(35)	560	391	3704629
248	29.5	5.9	2.1	chr7	99387062	99387158	(59958815)	C	MamRep1879	DNA/hAT-Tip100?	(17)	199	99	3704630
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
2484	6.3	0.0	1.6	chr7	101192792	101193107	(58152866)	+	AluY	SINE/Alu	1	311	(0)	3708212
2117	12.2	0.3	3.4	chr7	101440684	101441004	(57904969)	+	AluSx	SINE/Alu	1	311	(1)	3708825
11093	18.7	5.5	7.3	chr7	103047996	103050421	(56295552)	C	MER57-int	LTR/ERV1	(2404)	5412	1549	3712120
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
358	27.1	0.9	4.5	chr7	106568610	106568721	(52777252)	C	L4_A_Mam	LINE/RTE-X	(241)	4749	4642	3717760
970	24.1	15.2	2.1	chr7	107041281	107041502	(52304471)	+	MLT1J	LTR/ERVL-MaLR	132	383	(129)	3718504
445	32.8	7.3	7.8	chr7	108398519	108398875	(50947098)	+	L2c	LINE/L2	2993	3347	(40)	3720468
300	27.5	7.8	5.5	chr7	113421621	113421820	(45924153)	C	MamGypLTR2b	LTR/Gypsy	(134)	788	584	3727105
1428	26.3	8.0	2.0	chr7	116654798	116655289	(42690684)	+	MLT1G1	LTR/ERVL-MaLR	5	573	(6)	3731373
529	35.5	8.4	4.4	chr7	117576929	117577383	(41768590)	C	L2b	LINE/L2	(68)	3307	2820	3732748
327	27.3	10.7	1.1	chr7	123161317	123161501	(36184472)	+	L1MEd	LINE/L1	3283	3487	(2659)	3740042
342	28.0	5.7	4.5	chr7	123161522	123161678	(36184295)	+	MLT1J	LTR/ERVL-MaLR	234	392	(120)	3740046
341	29.6	8.7	4.5	chr7	123355972	123356148	(35989825)	+	LTR33	LTR/ERVL	317	501	(14)	3740306
2092	6.4	0.0	15.2	chr7	129373264	129373624	(29972349)	+	AluSc8	SINE/Alu	1	306	(5)	3749037
2134	22.2	7.4	0.8	chr7	131188269	131188771	(28157202)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	11	3752324
195	28.9	0.0	0.0	chr7	133040947	133040998	(26304975)	+	MIR3	SINE/MIR	125	176	(32)	3755288
377	30.1	5.7	2.2	chr7	133837241	133837376	(25508597)	+	MIR3	SINE/MIR	51	191	(17)	3756552
361	30.7	8.8	11.0	chr7	133934968	133935487	(25410486)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	1	3756702
303	25.0	15.7	7.6	chr7	134943619	134943973	(24402000)	C	L1ME4a	LINE/L1	(3)	6121	5733	3758273
735	21.3	13.9	1.7	chr7	135281754	135281930	(24064043)	C	MER58C	DNA/hAT-Charlie	(4)	211	10	3758689
16	4.5	0.0	0.0	chr7	136026250	136026272	(23319701)	+	(TTTC)n	Simple_repeat	1	23	(0)	3760006
581	27.4	14.1	7.7	chr7	136026389	136026792	(23319181)	+	MLT1O	LTR/ERVL-MaLR	78	511	(31)	3760007
630	2.8	0.0	0.0	chr7	139340700	139340771	(20005202)	+	tRNA-Arg-AGG	tRNA	1	72	(4)	3765383
2168	12.4	1.0	0.0	chr7	140674961	140675266	(18670707)	+	AluSz	SINE/Alu	1	309	(3)	3767994
19	4.3	0.0	0.0	chr7	141071482	141071505	(18274468)	+	(GA)n	Simple_repeat	1	24	(0)	3768721
471	30.7	4.7	1.6	chr7	150898872	150899119	(8446854)	C	MLT1J	LTR/ERVL-MaLR	(112)	400	145	3782618
1184	16.6	2.8	0.5	chr7	155008026	155008237	(4337736)	+	MER20	DNA/hAT-Charlie	1	217	(2)	3789025
834	26.3	6.7	4.5	chr7	156893822	156894102	(2451871)	C	ORSL-2b	DNA/hAT-Tip100	(1)	507	225	3791502
2553	6.2	0.7	0.0	chr7	156894103	156894409	(2451564)	C	AluSq2	SINE/Alu	(4)	309	1	3791503
216	28.6	2.3	10.6	chr8	8369211	8369351	(136769285)	C	L2c	LINE/L2	(0)	3387	3259	3804596
182	20.6	0.0	0.0	chr8	8369477	8369510	(136769126)	C	MIR	SINE/MIR	(9)	253	220	3804597
2669	16.4	4.0	2.1	chr8	11413246	11413774	(133724862)	+	MER41B	LTR/ERV1	1	596	(38)	3809551
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
1243	20.5	7.5	10.5	chr8	17832053	17832243	(127306393)	C	MSTB	LTR/ERVL-MaLR	(277)	188	1	3818781
26	18.2	3.1	1.5	chr8	17832244	17832308	(127306328)	+	GA-rich	Low_complexity	1	67	(0)	3818784
909	23.2	29.8	1.2	chr8	17898463	17898962	(127239674)	+	MLT2F	LTR/ERVL	1	658	(5)	3818914
356	19.3	18.8	0.2	chr8	22401182	22401276	(122737360)	C	MIR	SINE/MIR	(99)	109	3	3826144
362	24.2	8.2	3.1	chr8	22442741	22442936	(122695700)	C	Tigger15a	DNA/TcMar-Tigger	(161)	554	348	3826240
371	24.8	7.1	0.0	chr8	22442961	22443065	(122695571)	C	Tigger15a	DNA/TcMar-Tigger	(433)	282	170	3826240
2151	9.1	0.3	0.0	chr8	27465442	27465726	(117672910)	C	AluSc	SINE/Alu	(21)	288	3	3834420
11	22.8	0.0	4.3	chr8	27465727	27465739	(117672897)	+	A-rich	Low_complexity	31	43	(0)	3834421
502	25.0	3.5	1.4	chr8	27772777	27772918	(117365718)	+	MIR	SINE/MIR	88	232	(30)	3834959
2081	12.9	0.6	2.2	chr8	28363117	28363433	(116775203)	C	AluSx	SINE/Alu	(0)	312	1	3835984
184	41.4	4.9	0.0	chr8	28625265	28625380	(116513256)	+	MamRTE1	LINE/RTE-BovB	306	427	(3385)	3836532
16	16.4	0.0	0.0	chr8	28701422	28701455	(116437181)	+	(CGCGCC)n	Simple_repeat	1	34	(0)	3836721
18	0.0	0.0	0.0	chr8	28701618	28701640	(116436996)	+	(GGC)n	Simple_repeat	1	23	(0)	3836722
196	32.0	5.2	12.3	chr8	29176951	29177048	(115961588)	+	MamSINE1	SINE/tRNA-RTE	10	105	(185)	3837466
825	20.1	2.3	8.6	chr8	29177049	29177282	(115961354)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3837467
397	33.6	10.1	6.6	chr8	33535017	33535353	(111603283)	+	L2c	LINE/L2	3035	3382	(5)	3844695
1192	26.8	4.0	4.2	chr8	37657719	37658137	(107480499)	C	MLT1J	LTR/ERVL-MaLR	(43)	469	76	3850721
12	20.7	2.0	5.9	chr8	47188672	47188721	(97949915)	+	(CACCCAG)n	Simple_repeat	1	51	(0)	3861571
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
961	10.4	0.0	0.0	chr8	94612877	94613001	(50525635)	C	AluJb	SINE/Alu	(24)	288	164	3927213
905	32.2	5.4	4.2	chr8	97893302	97893561	(47245075)	C	LTR101_Mam	LTR/ERVL	(346)	483	219	3932669
418	20.2	9.5	5.8	chr8	102393066	102393186	(42745450)	+	L2a	LINE/L2	3301	3426	(0)	3940223
1060	19.0	10.5	4.9	chr8	119980081	119980385	(25158251)	C	MER33	DNA/hAT-Charlie	(0)	324	1	3965808
68	0.0	0.0	0.0	chr8	119980454	119980514	(25158122)	+	(TTTTC)n	Simple_repeat	1	61	(0)	3965809
1901	18.4	5.1	3.4	chr8	124271205	124271587	(20867049)	+	MLT1B	LTR/ERVL-MaLR	1	457	(0)	3973420
3624	21.1	1.0	1.0	chr9	21413574	21414277	(116980440)	C	L1M1	LINE/L1	(6847)	718	15	4039192
12	23.1	1.7	6.8	chr9	23830188	23830245	(114564472)	+	(CCTC)n	Simple_repeat	1	59	(0)	4042336
292	28.8	7.0	14.5	chr9	35945808	35946055	(102448662)	C	LTR50	LTR/ERVL	(567)	228	1	4059675
271	37.4	1.1	0.0	chr9	37594595	37594723	(100799994)	+	MIR3	SINE/MIR	4	133	(97)	4062999
1304	7.8	0.0	1.2	chr9	37594732	37594907	(100799810)	C	AluSc8	SINE/Alu	(0)	311	133	4063000
494	31.2	4.6	0.0	chr9	68644027	68644234	(69750483)	C	Helitron2Na_Mam	RC?/Helitron?	(35)	289	72	4080189
991	18.8	2.3	4.9	chr9	69027694	69027870	(69366847)	+	MER20	DNA/hAT-Charlie	2	173	(46)	4080816
2089	16.2	2.0	0.3	chr9	69027871	69028210	(69366507)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	2	4080817
3669	24.6	7.5	2.4	chr9	76000111	76001344	(62393373)	C	L1MC5	LINE/L1	(409)	8895	7595	4091810
448	27.7	5.5	0.0	chr9	78004521	78004674	(60390043)	+	LTR16C	LTR/ERVL	270	432	(57)	4095113
17	7.9	0.0	0.0	chr9	86034963	86034989	(52359728)	+	(TTCC)n	Simple_repeat	1	27	(0)	4107196
261	35.8	14.4	1.9	chr9	86938970	86939393	(51455324)	+	L2c	LINE/L2	2483	2968	(451)	4108698
381	34.7	3.9	3.9	chr9	86986289	86986522	(51408195)	+	MLT1L	LTR/ERVL-MaLR	14	247	(363)	4108762
269	29.3	3.3	2.5	chr9	86986574	86986692	(51408025)	+	MLT1L	LTR/ERVL-MaLR	330	449	(161)	4108762
715	19.9	2.1	2.1	chr9	92207330	92207473	(46187244)	C	L1MC3	LINE/L1	(924)	6861	6718	4116353
1678	22.8	11.5	8.0	chr9	92207492	92207880	(46186837)	C	HAL1	LINE/L1	(790)	1717	1346	4116354
2265	20.1	4.9	1.1	chr9	92706260	92706731	(45687986)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	1245	4117112
1124	14.2	3.2	2.3	chr9	94668910	94669126	(43725591)	C	MER20	DNA/hAT-Charlie	(0)	219	1	4120057
1857	13.5	16.3	1.3	chr9	94669130	94669594	(43725123)	+	MER61F	LTR/ERV1	5	540	(136)	4120058
547	28.2	11.2	4.9	chr9	97844836	97845304	(40549413)	+	L1ME4c	LINE/L1	309	810	(20)	4125260
412	25.5	6.4	8.0	chr9	97845321	97845464	(40549253)	C	L3	LINE/CR1	(771)	3328	3187	4125261
596	28.7	6.9	1.0	chr9	100505582	100505785	(37888932)	C	MER20B	DNA/hAT-Charlie	(561)	222	6	4130290
234	27.4	4.5	10.2	chr9	123248816	123248933	(15145784)	+	L2c	LINE/L2	3239	3349	(38)	4170319
382	26.5	12.7	1.9	chr9	123360693	123360846	(15033871)	+	MIRb	SINE/MIR	39	211	(57)	4170596
219	28.6	1.2	4.5	chr9	123360886	123360973	(15033744)	C	L3	LINE/CR1	(147)	3952	3868	4170597
260	20.2	11.6	5.6	chr9	125410342	125410430	(12984287)	+	MLT1K	LTR/ERVL-MaLR	158	252	(343)	4174631
1981	19.7	5.5	0.9	chr9	130763455	130763890	(7630827)	C	MLT1F	LTR/ERVL-MaLR	(87)	461	5	4185754
1917	11.6	5.2	0.0	chr9	131401964	131402238	(6992479)	C	AluSz	SINE/Alu	(5)	307	18	4187032
1075	17.6	3.9	2.8	chr9	131402273	131402546	(6992171)	C	L1MB3	LINE/L1	(199)	5984	5706	4187029
234	18.5	0.0	3.6	chr9	134217905	134217960	(4176757)	C	MER20B	DNA/hAT-Charlie	(702)	81	28	4191738
317	33.7	8.3	11.0	chr9	134811816	134812271	(3582446)	C	L1ME4a	LINE/L1	(29)	6095	5653	4192438
767	34.1	6.7	7.2	chr9	135731357	135731991	(2662726)	C	HAL1b	LINE/L1	(574)	1847	1243	4193577
7557	4.5	0.2	0.2	chr9	137545528	137546506	(848211)	+	LTR13	LTR/ERVK	29	1007	(0)	4195765
1266	13.9	4.1	0.5	chrX	13898143	13898352	(142142543)	C	MER20	DNA/hAT-Charlie	(1)	218	1	4381937
351	31.8	5.6	6.4	chrX	13898353	13898385	(142142510)	C	Charlie19a	DNA/hAT-Charlie	(295)	91	64	4381936
12	22.1	0.0	0.0	chrX	17854610	17854641	(138186254)	+	A-rich	Low_complexity	1	32	(0)	4388482
348	29.5	6.4	6.4	chrX	20263748	20263888	(135777007)	C	L2b	LINE/L2	(4)	3371	3231	4392854
2456	16.1	1.7	6.9	chrX	23945157	23945649	(132095246)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	4398450
13	12.8	5.6	2.6	chrX	24495031	24495066	(131545829)	+	(TTGTT)n	Simple_repeat	1	38	(0)	4399642
337	12.5	0.0	5.1	chrX	38052198	38052256	(117988639)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	450	4418353
1429	26.9	8.5	6.1	chrX	38182425	38183018	(117857877)	+	MLT1F2	LTR/ERVL-MaLR	1	610	(0)	4418555
712	26.6	10.9	1.8	chrX	38240054	38240336	(117800559)	+	MLT1J	LTR/ERVL-MaLR	26	337	(175)	4418646
24189	10.4	3.1	1.1	chrX	40794363	40796320	(115244575)	+	L1PB1	LINE/L1	895	2931	(3932)	4423109
35	26.4	2.8	3.4	chrX	41333339	41333480	(114707415)	+	(CTCCC)n	Simple_repeat	1	146	(0)	4424165
314	26.8	2.4	1.2	chrX	46978776	46978858	(109062037)	+	MIRc	SINE/MIR	64	147	(121)	4433164
1539	13.7	1.2	1.1	chrX	48020781	48021052	(108019843)	C	L1MA5	LINE/L1	(1)	6290	6025	4435169
252	29.7	2.7	8.2	chrX	72127668	72127825	(83913070)	+	L1ME4a	LINE/L1	5634	5782	(342)	4462759
460	25.9	1.4	2.0	chrX	72127909	72128054	(83912841)	+	L1ME4a	LINE/L1	5963	6107	(17)	4462759
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
12	14.7	3.3	0.0	chrX	101617440	101617469	(54423426)	+	(CCCACC)n	Simple_repeat	1	31	(0)	4496263
44	15.6	9.1	0.0	chrX	111445802	111445922	(44594973)	+	(TATC)n	Simple_repeat	1	132	(0)	4509894
930	18.8	4.2	6.3	chrX	112368480	112368700	(43672195)	+	MER20	DNA/hAT-Charlie	4	219	(0)	4511348
1093	15.5	5.5	1.9	chrX	118603983	118604193	(37436702)	C	MER20	DNA/hAT-Charlie	(0)	219	1	4519552
911	19.5	4.1	5.0	chrX	119880922	119881142	(36159753)	+	MER20	DNA/hAT-Charlie	1	219	(0)	4522053
1075	28.4	8.1	5.6	chrX	120477555	120478013	(35562882)	+	MLT1L	LTR/ERVL-MaLR	1	528	(82)	4523001
2351	9.9	0.0	0.0	chrX	129605240	129605542	(26435353)	+	AluSc8	SINE/Alu	1	303	(8)	4534949
5430	19.9	4.3	4.7	chrX	132939642	132940765	(23100130)	+	L1M4b	LINE/L1	5187	6339	(705)	4540128
1240	23.8	5.3	3.8	chrX	153697561	153697984	(2342911)	+	L1MB3	LINE/L1	5725	6155	(28)	4570625
14	23.4	0.0	2.4	chrX	153971840	153971881	(2069014)	+	(GGC)n	Simple_repeat	1	42	(0)	4570996
32	0.0	5.4	0.0	chrX	154137340	154137376	(1903519)	+	(TTTCT)n	Simple_repeat	1	39	(0)	4571333
1658	14.0	3.9	0.4	chrX	154137378	154137648	(1903247)	C	AluJo	SINE/Alu	(31)	281	1	4571334
1103	11.4	26.5	0.0	chrX	154411162	154411380	(1629515)	+	AluJb	SINE/Alu	1	298	(14)	4571812
24	24.1	0.0	1.5	chrX	154437168	154437232	(1603663)	+	(GCG)n	Simple_repeat	1	65	(0)	4571862