18	8.9	5.5	6.9	chr1	930088	930142	(248026280)	+	(CCTCT)n	Simple_repeat	1	58	(0)	1182
17	18.9	4.0	1.9	chr1	941911	941960	(248014462)	+	(CCG)n	Simple_repeat	1	52	(0)	1190
18	22.0	0.0	0.0	chr1	945074	945115	(248011307)	+	(TCC)n	Simple_repeat	1	42	(0)	1194
13	19.0	1.8	7.1	chr1	1068759	1068813	(247887609)	+	(GTGCAG)n	Simple_repeat	1	56	(0)	1333
15	15.5	7.0	0.0	chr1	1116237	1116279	(247840143)	+	G-rich	Low_complexity	1	46	(0)	1382
16	14.5	0.0	0.0	chr1	1137774	1137804	(247818618)	+	(CCCTCC)n	Simple_repeat	1	31	(0)	1402
12	19.7	2.3	4.4	chr1	1137821	1137864	(247818558)	+	G-rich	Low_complexity	1	45	(0)	1403
15	9.9	0.0	7.9	chr1	1222542	1222579	(247733843)	+	(CAGGCC)n	Simple_repeat	1	38	(0)	1482
2559	3.5	0.7	1.9	chr1	1256601	1256911	(247699511)	+	AluY	SINE/Alu	1	307	(4)	1516
270	28.9	5.8	1.7	chr1	1258727	1258842	(247697580)	+	L2	LINE/L2	2595	2715	(704)	1519
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
35	26.1	1.4	4.3	chr1	1293938	1294075	(247662347)	+	G-rich	Low_complexity	1	140	(0)	1562
12	19.9	1.9	7.4	chr1	1299703	1299755	(247656667)	+	G-rich	Low_complexity	1	54	(0)	1564
16	22.0	0.0	6.7	chr1	1304981	1305040	(247651382)	+	G-rich	Low_complexity	1	60	(0)	1572
17	9.2	5.7	0.0	chr1	1308179	1308213	(247648209)	+	(GGGCGC)n	Simple_repeat	1	37	(0)	1575
1580	14.7	6.4	3.1	chr1	1318377	1318662	(247637760)	+	AluJb	SINE/Alu	2	297	(15)	1587
24	23.2	0.0	1.6	chr1	1399243	1399304	(247557118)	+	(CGC)n	Simple_repeat	1	62	(0)	1683
16	7.3	11.1	2.0	chr1	1425880	1425924	(247530498)	+	(GGAGCT)n	Simple_repeat	1	50	(0)	1729
1862	13.1	18.2	2.6	chr1	1470859	1471236	(247485186)	+	LTR7	LTR/ERV1	1	450	(0)	1799
2160	11.7	1.3	0.3	chr1	1586913	1587219	(247369203)	C	AluSx1	SINE/Alu	(1)	311	2	2005
1990	10.1	1.0	5.8	chr1	1587220	1587397	(247369025)	C	AluSx3	SINE/Alu	(9)	302	132	2006
13	17.1	2.3	4.5	chr1	1615445	1615487	(247340935)	+	G-rich	Low_complexity	1	44	(0)	2066
19	13.5	0.0	8.6	chr1	1629847	1629904	(247326518)	+	(CCCCCAG)n	Simple_repeat	1	58	(0)	2072
1386	23.6	10.9	6.3	chr1	1858667	1859016	(247097406)	+	MER119	DNA/hAT-Charlie	31	411	(172)	2482
2156	12.6	0.3	0.0	chr1	1859017	1859317	(247097105)	C	AluSz	SINE/Alu	(6)	306	5	2483
1386	23.6	10.9	6.3	chr1	1859318	1859401	(247097021)	+	MER119	DNA/hAT-Charlie	412	478	(105)	2482
387	10.4	30.8	4.2	chr1	1859402	1859497	(247096925)	+	AluJo	SINE/Alu	1	133	(179)	2484
2001	11.1	4.4	0.0	chr1	1887633	1887912	(247068510)	C	AluSz6	SINE/Alu	(17)	295	3	2563
734	30.7	11.5	0.5	chr1	2187614	2188052	(246768370)	C	L1MC1	LINE/L1	(0)	6333	5840	2975
32	0.0	0.0	0.0	chr1	2199392	2199421	(246757001)	+	(CCCAG)n	Simple_repeat	1	30	(0)	2989
13	23.4	1.6	6.3	chr1	2272819	2272880	(246683542)	+	(CCCCG)n	Simple_repeat	1	63	(0)	3080
14	15.0	5.4	0.0	chr1	2287880	2287916	(246668506)	+	(CCCTGAG)n	Simple_repeat	1	39	(0)	3097
2333	11.3	0.7	0.0	chr1	2287976	2288285	(246668137)	C	AluSp	SINE/Alu	(0)	313	2	3098
35	25.6	1.6	7.4	chr1	2412623	2412808	(246543614)	+	G-rich	Low_complexity	1	189	(0)	3203
12	18.3	5.0	2.4	chr1	3394364	3394403	(245562019)	+	(CCGC)n	Simple_repeat	1	42	(0)	3964
20	23.3	4.3	4.2	chr1	3403023	3403114	(245553308)	+	(CCTCC)n	Simple_repeat	1	96	(0)	3968
366	28.2	14.5	4.5	chr1	3406111	3406455	(245549967)	C	L2b	LINE/L2	(38)	3337	2936	3969
268	31.2	5.0	0.0	chr1	3419395	3419490	(245536932)	C	MIRb	SINE/MIR	(75)	193	93	3978
182	29.7	9.8	0.0	chr1	3455448	3455521	(245500901)	+	MIRc	SINE/MIR	74	155	(113)	4015
12	18.4	0.0	3.0	chr1	3471528	3471560	(245484862)	+	G-rich	Low_complexity	1	33	(0)	4027
15	7.3	3.2	3.1	chr1	3531502	3531532	(245424890)	+	(CCGGCC)n	Simple_repeat	1	32	(0)	4085
20	20.2	1.4	5.6	chr1	3531533	3531570	(245424852)	+	(GCCCC)n	Simple_repeat	2	71	(0)	4086
13	24.9	3.3	3.2	chr1	3651961	3652021	(245304401)	+	(CCCCTGT)n	Simple_repeat	1	63	(0)	4184
20	24.7	0.0	1.7	chr1	3652504	3652562	(245303860)	+	(GCCC)n	Simple_repeat	1	59	(0)	4185
320	24.0	5.0	3.0	chr1	3680937	3681035	(245275387)	+	MIRb	SINE/MIR	78	178	(90)	4232
14	24.2	1.4	6.8	chr1	3699721	3699799	(245256623)	+	(GGAGCT)n	Simple_repeat	1	74	(0)	4248
13	16.5	11.1	0.0	chr1	3747455	3747508	(245208914)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	4292
190	19.6	2.1	0.0	chr1	3869938	3869983	(245086439)	C	MER5B	DNA/hAT-Charlie	(0)	178	132	4481
323	26.7	1.9	0.0	chr1	3870035	3870139	(245086283)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	284	4482
1390	24.6	10.7	4.3	chr1	5928103	5928619	(243027803)	C	L1MD2	LINE/L1	(239)	6120	5567	7444
269	35.0	13.2	0.8	chr1	5980352	5980590	(242975832)	C	L2a	LINE/L2	(418)	3001	2729	7513
2188	8.2	1.7	0.0	chr1	6017522	6017803	(242938619)	+	AluSx1	SINE/Alu	11	297	(15)	7566
1441	17.9	6.2	3.2	chr1	6017804	6017854	(242938568)	C	AluJo	SINE/Alu	(261)	51	1	7564
1492	17.5	1.4	8.9	chr1	6017923	6018236	(242938186)	C	AluJo	SINE/Alu	(22)	290	1	7567
17	17.1	2.3	4.5	chr1	6073256	6073298	(242883124)	+	(AC)n	Simple_repeat	1	44	(0)	7643
1130	13.3	10.6	0.0	chr1	6075720	6075930	(242880492)	C	L1MB4	LINE/L1	(0)	6180	5945	7646
882	18.5	2.8	0.0	chr1	6075938	6076110	(242880312)	+	MER58A	DNA/hAT-Charlie	47	224	(0)	7647
2450	6.0	0.0	1.7	chr1	6113968	6114266	(242842156)	+	AluSg	SINE/Alu	1	294	(16)	7678
283	25.3	6.7	0.0	chr1	6205242	6205324	(242751098)	C	MIR3	SINE/MIR	(84)	124	36	7831
2092	6.2	7.4	0.0	chr1	6205477	6205750	(242750672)	C	AluSz	SINE/Alu	(16)	296	1	7832
227	22.7	19.4	1.3	chr1	6428000	6428075	(242528347)	C	MIRb	SINE/MIR	(138)	130	38	8210
11	36.5	0.0	0.0	chr1	6471686	6471744	(242484678)	+	(CCCCGC)n	Simple_repeat	1	59	(0)	8282
15	7.0	6.7	0.0	chr1	6488777	6488806	(242467616)	+	(AGCCCC)n	Simple_repeat	1	32	(0)	8315
1683	16.3	3.1	1.1	chr1	6799086	6799367	(242157055)	C	AluJr	SINE/Alu	(23)	289	2	8948
584	32.6	7.2	7.7	chr1	6916778	6917195	(242039227)	C	L2b	LINE/L2	(1)	3374	2959	9126
390	31.6	20.2	1.8	chr1	6917195	6917749	(242038673)	C	L2b	LINE/L2	(402)	3017	2335	9125
19	12.3	4.3	2.1	chr1	6962345	6962390	(241994032)	+	(CCTCC)n	Simple_repeat	1	48	(0)	9194
435	29.5	0.4	1.4	chr1	7654470	7655796	(241300626)	+	(AC)n	Simple_repeat	1	1332	(0)	10122
35	2.6	0.0	2.4	chr1	8684834	8684875	(240271547)	+	(TCAT)n	Simple_repeat	1	42	(0)	12046
706	28.7	7.6	5.3	chr1	8822715	8823111	(240133311)	+	AmnSINE1	SINE/5S-Deu-L2	144	550	(25)	12318
1980	12.9	1.0	1.0	chr1	8886031	8886332	(240070090)	+	AluSx1	SINE/Alu	1	302	(10)	12460
1087	22.5	7.7	2.3	chr1	8886333	8886591	(240069831)	+	MLT1A0	LTR/ERVL-MaLR	76	349	(16)	12461
1229	19.5	0.8	7.4	chr1	9086204	9086376	(239870046)	C	LTR8B	LTR/ERV1	(0)	820	661	12921
2062	14.7	0.0	0.6	chr1	9086377	9086689	(239869733)	C	AluSz	SINE/Alu	(0)	312	2	12922
12	26.6	2.9	4.3	chr1	9129441	9129508	(239826914)	+	(GCCCAGA)n	Simple_repeat	1	70	(0)	12991
11	16.9	2.9	2.8	chr1	9129586	9129620	(239826802)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	12992
32	16.9	2.7	1.3	chr1	9234699	9234773	(239721649)	+	(CCCCGC)n	Simple_repeat	1	77	(0)	13219
2159	10.5	1.7	0.0	chr1	9266825	9267119	(239689303)	C	AluSx1	SINE/Alu	(12)	300	1	13270
31	0.0	0.0	0.0	chr1	9292725	9292753	(239663669)	+	(CGCGCCC)n	Simple_repeat	1	29	(0)	13319
26	0.0	0.0	0.0	chr1	9292797	9292821	(239663601)	+	(GGGGC)n	Simple_repeat	1	25	(0)	13320
17410	15.9	5.1	4.1	chr1	9299983	9301207	(239655215)	+	ERVL-B4-int	LTR/ERVL	2712	3911	(1803)	13330
14	17.5	1.6	9.5	chr1	9351984	9352045	(239604377)	+	(CCCT)n	Simple_repeat	1	63	(0)	13412
2262	12.5	0.0	0.3	chr1	9385251	9385561	(239570861)	C	AluSz6	SINE/Alu	(2)	310	1	13471
17	24.3	3.5	5.6	chr1	9588585	9588670	(239367752)	+	(GCC)n	Simple_repeat	1	89	(0)	13956
13	25.2	0.0	2.3	chr1	9687551	9687594	(239268828)	+	G-rich	Low_complexity	1	44	(0)	14179
2146	13.6	0.7	1.0	chr1	9802814	9803121	(239153301)	C	AluJr	SINE/Alu	(4)	308	2	14412
12	13.3	9.3	2.1	chr1	10033001	10033043	(238923379)	+	G-rich	Low_complexity	1	47	(0)	14941
17	27.1	1.3	3.9	chr1	10210638	10210713	(238745709)	+	(CACCGCC)n	Simple_repeat	1	77	(0)	15342
72	23.0	1.2	0.0	chr1	10699942	10700113	(238256309)	+	(GAGACA)n	Simple_repeat	1	174	(0)	16230
34	0.0	0.0	0.0	chr1	10700081	10700117	(238256305)	+	(AC)n	Simple_repeat	1	37	(0)	16231
181	16.0	0.0	5.7	chr1	11100092	11100144	(237856278)	C	MIRc	SINE/MIR	(51)	217	168	17029
1804	16.6	0.6	3.1	chr1	11118607	11118926	(237837496)	C	AluJb	SINE/Alu	(0)	312	1	17067
889	15.7	1.2	8.1	chr1	11118927	11119025	(237837397)	C	FAM	SINE/Alu	(87)	98	12	17066
229	25.5	7.8	0.9	chr1	11119038	11119144	(237837278)	+	L1MC	LINE/L1	4996	5110	(1036)	17068
1428	21.3	4.8	2.1	chr1	11173301	11173582	(237782840)	C	AluSz6	SINE/Alu	(22)	290	1	17162
30	3.1	0.0	0.0	chr1	11648973	11649005	(237307417)	+	(CAGCC)n	Simple_repeat	1	33	(0)	18152
547	32.1	3.9	2.0	chr1	11681725	11681960	(237274462)	C	MIR	SINE/MIR	(0)	262	32	18225
206	28.7	9.4	0.0	chr1	11768838	11768924	(237187498)	+	MIRb	SINE/MIR	7	102	(166)	18416
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
14	22.1	0.0	0.0	chr1	11939347	11939383	(237017039)	+	G-rich	Low_complexity	1	37	(0)	18789
10579	3.5	2.1	8.8	chr1	12007767	12009247	(236947175)	C	SVA_C	Retroposon/SVA	(1)	1383	5	18943
336	16.0	4.8	1.0	chr1	12619303	12619402	(236337020)	C	MER5A	DNA/hAT-Charlie	(42)	147	33	20097
482	25.1	16.1	2.2	chr1	13505593	13505998	(235450424)	C	L2a	LINE/L2	(98)	3328	2842	21544
203	34.0	9.9	4.8	chr1	13506007	13506340	(235450082)	C	L2b	LINE/L2	(46)	3329	2977	21545
16	21.0	1.4	7.1	chr1	15153699	15153767	(233802655)	+	(CCGCCTC)n	Simple_repeat	1	70	(0)	24655
309	28.4	2.2	0.0	chr1	15246992	15247093	(233709329)	+	MIR	SINE/MIR	42	146	(62)	24859
15	0.0	0.0	4.3	chr1	15950925	15950989	(233005433)	+	(GGAT)n	Simple_repeat	1	62	(0)	26386
16	21.1	4.1	0.0	chr1	16026924	16026972	(232929450)	+	G-rich	Low_complexity	1	51	(0)	26544
301	19.4	2.9	0.0	chr1	16027026	16027092	(232929330)	+	MIR	SINE/MIR	103	171	(91)	26545
46	0.0	0.0	0.0	chr1	16083603	16083645	(232872777)	+	(CCCTGCCCAG)n	Simple_repeat	1	43	(0)	26650
183	26.2	0.0	0.0	chr1	16122921	16122962	(232833460)	+	MIR3	SINE/MIR	37	78	(130)	26736
322	31.8	21.4	0.7	chr1	16122967	16123240	(232833182)	+	L2c	LINE/L2	2821	3155	(232)	26737
17	28.6	1.4	2.8	chr1	16155967	16156037	(232800385)	+	(GCCC)n	Simple_repeat	1	72	(0)	26799
497	24.8	9.8	9.0	chr1	16164128	16164371	(232792051)	+	L2a	LINE/L2	3179	3424	(2)	26821
296	31.6	6.8	0.7	chr1	16164414	16164550	(232791872)	+	MIR	SINE/MIR	73	218	(44)	26824
2123	11.2	1.4	1.0	chr1	16419658	16419951	(232536471)	+	AluSx	SINE/Alu	1	295	(17)	27442
993	30.6	14.1	3.3	chr1	16419952	16420374	(232536048)	C	L2a	LINE/L2	(1061)	2358	1889	27441
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
15	17.0	0.0	0.0	chr1	16913990	16914022	(232042400)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	28246
234	35.9	3.3	0.7	chr1	16914490	16914635	(232041787)	C	MIRb	SINE/MIR	(23)	245	96	28247
260	30.4	12.1	10.5	chr1	17551197	17551310	(231405112)	C	L2b	LINE/L2	(11)	3376	3261	29710
31	0.0	5.6	0.0	chr1	17680075	17680110	(231276312)	+	(CCCTGC)n	Simple_repeat	1	38	(0)	29977
15	6.5	5.9	2.8	chr1	18113587	18113623	(230842799)	+	(CACCCC)n	Simple_repeat	1	38	(0)	30953
248	30.8	12.3	7.3	chr1	18158966	18159210	(230797212)	+	L2b	LINE/L2	3097	3355	(20)	31058
653	31.3	7.7	0.0	chr1	18400951	18401167	(230555255)	+	MIRb	SINE/MIR	26	260	(8)	31557
30	2.2	8.5	0.0	chr1	18913805	18913851	(230042571)	+	(TTGT)n	Simple_repeat	1	51	(0)	32685
332	26.4	5.7	6.1	chr1	19053632	19053825	(229902597)	C	MIRc	SINE/MIR	(2)	266	60	33019
601	23.7	7.8	1.4	chr1	19062512	19062709	(229893713)	C	MIRb	SINE/MIR	(38)	230	15	33032
517	18.3	5.5	0.0	chr1	19062817	19062920	(229893502)	+	MLT1N2	LTR/ERVL-MaLR	116	225	(337)	33033
26	3.5	0.0	0.0	chr1	19468571	19468600	(229487822)	+	(GCAGG)n	Simple_repeat	1	30	(0)	33690
660	29.0	5.5	2.2	chr1	19641049	19641277	(229315145)	+	MIRb	SINE/MIR	2	238	(30)	34107
643	27.1	17.6	4.6	chr1	20197330	20197863	(228758559)	C	L2a	LINE/L2	(205)	3221	2639	35271
544	33.0	14.6	3.9	chr1	20281227	20282068	(228674354)	+	L2b	LINE/L2	2295	3236	(151)	35436
2115	15.8	12.9	4.9	chr1	20612289	20612679	(228343743)	+	LTR7C	LTR/ERV1	1	439	(32)	36185
2223	7.1	5.7	0.0	chr1	20612680	20612962	(228343460)	+	AluSg	SINE/Alu	1	300	(10)	36186
21	21.1	0.0	3.5	chr1	20633486	20633543	(228322879)	+	(CGG)n	Simple_repeat	1	58	(0)	36239
1326	17.9	10.6	4.4	chr1	21083350	21083623	(227872799)	C	AluJb	SINE/Alu	(19)	293	1	37094
404	28.1	8.6	0.0	chr1	21189678	21189816	(227766606)	+	L2a	LINE/L2	3272	3423	(3)	37336
410	26.9	10.2	0.7	chr1	21195039	21195188	(227761234)	C	MIRc	SINE/MIR	(100)	168	3	37357
474	31.1	10.9	4.8	chr1	21310163	21310574	(227645848)	C	MLT1K	LTR/ERVL-MaLR	(116)	479	40	37634
354	32.2	7.9	2.9	chr1	21334877	21335116	(227621306)	+	L2	LINE/L2	2745	2997	(422)	37696
320	31.8	8.9	2.6	chr1	21340403	21340556	(227615866)	+	L2b	LINE/L2	2696	2862	(557)	37709
1931	11.8	3.0	0.7	chr1	21340557	21340845	(227615577)	+	AluSz	SINE/Alu	1	296	(16)	37710
14	20.1	0.0	0.0	chr1	21652095	21652128	(227304294)	+	(CCCCGC)n	Simple_repeat	1	34	(0)	38389
494	29.1	7.6	0.0	chr1	21652260	21652419	(227304003)	+	MIR	SINE/MIR	97	257	(5)	38390
13	4.2	8.0	0.0	chr1	21669458	21669482	(227286940)	+	(CCCCG)n	Simple_repeat	1	27	(0)	38432
463	23.6	0.8	0.0	chr1	21669510	21669632	(227286790)	C	MIR3	SINE/MIR	(61)	147	24	38433
400	28.7	7.8	0.7	chr1	21920217	21920363	(227036059)	C	MIRb	SINE/MIR	(121)	147	5	38962
259	27.9	1.7	2.7	chr1	22025238	22025366	(226931056)	C	MIRb	SINE/MIR	(28)	180	60	39248
430	27.5	11.9	1.1	chr1	22025945	22026124	(226930298)	+	MIRb	SINE/MIR	58	259	(9)	39249
848	20.1	8.6	1.6	chr1	22253313	22253560	(226702862)	C	Arthur1	DNA/hAT-Tip100	(0)	3947	3681	39742
251	10.4	2.0	5.9	chr1	22253562	22253612	(226702810)	C	Arthur1B	DNA/hAT-Tip100	(1114)	111	63	39743
18	29.0	0.0	0.0	chr1	22253634	22253683	(226702739)	+	(TG)n	Simple_repeat	1	50	(0)	39744
13	14.9	6.0	5.7	chr1	22556526	22556575	(226399847)	+	GA-rich	Low_complexity	1	53	(0)	40382
7946	15.0	5.5	3.8	chr1	22949447	22950367	(226006055)	+	L1MD1	LINE/L1	5139	6078	(164)	41306
39	0.0	2.6	0.0	chr1	22950368	22950406	(226006016)	+	(TAT)n	Simple_repeat	1	40	(0)	41313
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
2116	11.8	0.7	0.0	chr1	23436175	23436462	(225519960)	C	AluSz6	SINE/Alu	(22)	290	1	42406
397	28.8	0.9	0.0	chr1	23484865	23484975	(225471447)	+	MIRb	SINE/MIR	76	187	(81)	42533
881	17.2	0.0	0.8	chr1	23543755	23543888	(225412534)	C	FLAM_C	SINE/Alu	(10)	133	1	42693
1956	16.4	0.0	0.3	chr1	23544010	23544308	(225412114)	+	AluJr	SINE/Alu	2	299	(13)	42694
670	30.0	1.5	0.5	chr1	23650561	23650761	(225305661)	+	MIRb	SINE/MIR	50	252	(16)	42993
186	36.8	2.9	0.0	chr1	23825554	23825621	(225130801)	C	L2b	LINE/L2	(24)	3351	3282	43449
5024	12.7	1.6	3.9	chr1	23837781	23838651	(225117771)	+	LTR1A2	LTR/ERV1	7	803	(34)	43485
363	10.3	1.7	0.0	chr1	23838717	23838774	(225117648)	+	LTR1A2	LTR/ERV1	779	837	(0)	43485
249	27.4	8.8	0.0	chr1	24047357	24047429	(224908993)	C	MER115	DNA/hAT-Tip100	(536)	157	78	44015
940	13.2	5.7	1.3	chr1	24105613	24105763	(224850659)	+	FRAM	SINE/Alu	1	158	(18)	44143
624	8.9	0.0	0.0	chr1	24150784	24150862	(224805560)	+	AluSx1	SINE/Alu	139	217	(95)	44238
197	29.4	7.6	0.0	chr1	24438631	24438715	(224517707)	+	L2b	LINE/L2	3238	3370	(56)	44893
23	16.5	3.7	0.0	chr1	24502737	24502790	(224453632)	+	(CCCCCG)n	Simple_repeat	1	56	(0)	45043
1311	22.1	22.6	4.6	chr1	24562619	24563178	(224393244)	+	L1MEh	LINE/L1	263	932	(1303)	45171
13	12.2	2.4	7.1	chr1	24660173	24660213	(224296209)	+	(AGTGTG)n	Simple_repeat	1	42	(0)	45392
599	30.1	7.3	1.3	chr1	24694459	24694709	(224261713)	C	MIR	SINE/MIR	(3)	265	2	45487
290	30.5	7.1	1.9	chr1	24704519	24704625	(224251797)	C	MLT1O	LTR/ERVL-MaLR	(269)	273	161	45517
218	33.2	5.5	7.8	chr1	24724878	24725083	(224231339)	C	L2b	LINE/L2	(140)	3235	3035	45577
1830	24.0	6.2	1.1	chr1	24741915	24742377	(224214045)	C	L2a	LINE/L2	(7)	3419	2932	45637
35	11.6	0.0	0.0	chr1	24876328	24876384	(224080038)	+	(GGGCG)n	Simple_repeat	1	57	(0)	45925
343	37.4	1.3	0.7	chr1	24998909	24999056	(223957366)	C	MIR3	SINE/MIR	(31)	177	29	46164
3735	15.8	11.5	1.2	chr1	25232782	25233512	(223722910)	+	LTR8B	LTR/ERV1	2	817	(3)	46664
302	16.3	11.3	2.8	chr1	25239653	25239750	(223716672)	C	FRAM	SINE/Alu	(10)	156	79	46682
489	28.6	0.8	0.8	chr1	25556734	25556867	(223399555)	+	MIR	SINE/MIR	110	243	(19)	47390
246	30.0	7.3	4.1	chr1	25569674	25569819	(223386603)	C	MIRb	SINE/MIR	(3)	265	115	47403
13	4.3	3.9	3.7	chr1	25747226	25747251	(223209171)	+	(GGGTG)n	Simple_repeat	1	27	(0)	47756
1129	21.2	13.1	0.3	chr1	25854336	25854651	(223101771)	C	MLT1F-int	LTR/ERVL-MaLR	(9)	1480	1117	47945
1080	21.2	17.1	0.0	chr1	25854650	25854936	(223101486)	C	MLT1F	LTR/ERVL-MaLR	(66)	482	137	47945
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
12	27.7	3.1	3.0	chr1	25859514	25859535	(223096887)	+	(CCGCC)n	Simple_repeat	1	66	(0)	47961
2322	6.6	0.0	1.4	chr1	25895100	25895385	(223061037)	C	AluY	SINE/Alu	(9)	302	21	48052
642	29.4	8.7	2.1	chr1	25895500	25895787	(223060635)	C	MER102b	DNA/hAT-Charlie	(25)	316	8	48053
16	0.0	0.0	4.2	chr1	25906067	25906090	(223050332)	+	(AGGG)n	Simple_repeat	1	24	(0)	48069
909	12.9	0.0	0.0	chr1	25908661	25908776	(223047646)	C	AluJo	SINE/Alu	(196)	116	1	48071
1718	18.2	0.7	1.0	chr1	26128456	26128746	(222827676)	+	AluJb	SINE/Alu	1	290	(22)	48630
37	23.2	0.0	0.0	chr1	26128747	26128827	(222827595)	+	(CA)n	Simple_repeat	1	81	(0)	48631
675	23.5	12.2	3.5	chr1	26128828	26129087	(222827335)	+	L1MEc	LINE/L1	417	702	(5698)	48628
2115	15.3	0.0	0.6	chr1	26154519	26154831	(222801591)	+	AluJb	SINE/Alu	1	311	(1)	48706
2185	11.6	2.3	0.3	chr1	26222080	26222380	(222734042)	C	AluSx1	SINE/Alu	(4)	308	2	48846
808	11.7	1.6	0.0	chr1	26222413	26222532	(222733890)	+	AluSz6	SINE/Alu	190	311	(1)	48847
358	32.0	1.6	0.8	chr1	26317630	26317752	(222638670)	C	MIRb	SINE/MIR	(141)	127	4	49055
541	27.5	0.6	7.3	chr1	26821071	26821262	(222135160)	+	AluJb	SINE/Alu	121	299	(13)	50226
522	15.2	4.5	0.0	chr1	26821300	26821404	(222135018)	+	LTR50	LTR/ERVL	542	651	(144)	50235
1216	14.3	13.4	3.8	chr1	27097643	27097810	(221858612)	C	Tigger4b	DNA/TcMar-Tigger	(2)	359	175	50920
13	10.1	5.9	2.8	chr1	27122850	27122883	(221833539)	+	G-rich	Low_complexity	1	36	(0)	50979
17	29.6	1.1	4.4	chr1	27383355	27383443	(221572979)	+	G-rich	Low_complexity	1	90	(0)	51614
14	18.4	2.7	0.0	chr1	27392530	27392566	(221563856)	+	(GCCGC)n	Simple_repeat	1	38	(0)	51639
1815	17.2	0.0	4.1	chr1	27475622	27475940	(221480482)	C	AluJb	SINE/Alu	(6)	306	1	51815
583	30.1	13.3	5.0	chr1	27475941	27476076	(221480346)	+	L2a	LINE/L2	3271	3419	(7)	51804
329	26.6	3.4	9.6	chr1	27538807	27538879	(221417543)	+	MIR3	SINE/MIR	126	190	(18)	51991
398	25.7	6.3	5.1	chr1	27591315	27591477	(221364945)	+	MIR3	SINE/MIR	26	184	(24)	52082
40	0.0	0.0	0.0	chr1	27660010	27660046	(221296376)	+	(CCGCCCCA)n	Simple_repeat	1	37	(0)	52242
14	22.2	5.8	0.0	chr1	27672284	27672335	(221284087)	+	(TCTGCAC)n	Simple_repeat	1	55	(0)	52273
1703	15.0	5.6	1.1	chr1	27763305	27763577	(221192845)	C	AluJo	SINE/Alu	(26)	286	1	52480
305	25.3	6.9	0.0	chr1	27763603	27763697	(221192725)	C	L2a	LINE/L2	(25)	3401	3300	52481
2286	8.0	3.9	0.0	chr1	27888510	27888808	(221067614)	C	AluSp	SINE/Alu	(2)	311	1	52756
1738	12.2	3.7	4.0	chr1	27888809	27888903	(221067519)	C	AluSx	SINE/Alu	(218)	94	1	52755
784	17.5	0.6	7.3	chr1	28180968	28181144	(220775278)	C	FRAM	SINE/Alu	(10)	166	2	53469
396	15.9	0.0	0.0	chr1	28181148	28181210	(220775212)	+	MLT1D	LTR/ERVL-MaLR	443	505	(0)	53470
2082	8.8	1.3	6.3	chr1	28197234	28197550	(220758872)	C	AluSz	SINE/Alu	(11)	301	1	53519
219	19.2	5.5	1.9	chr1	28197574	28197626	(220758796)	C	MIRc	SINE/MIR	(118)	150	96	53520
2151	10.5	0.3	2.9	chr1	28479604	28479917	(220476505)	+	AluSq	SINE/Alu	1	306	(7)	54308
2166	10.3	0.0	0.0	chr1	28540414	28540703	(220415719)	+	AluSz	SINE/Alu	1	290	(22)	54463
1222	16.5	1.0	0.0	chr1	28540811	28541010	(220415412)	C	AluSx	SINE/Alu	(8)	304	103	54464
12	20.7	5.1	0.0	chr1	28553062	28553100	(220403322)	+	(GCCCC)n	Simple_repeat	1	41	(0)	54505
814	9.2	0.0	0.0	chr1	28747609	28747717	(220208705)	C	AluY	SINE/Alu	(202)	109	1	55039
438	32.5	5.0	1.4	chr1	28898354	28898565	(220057857)	+	MIRb	SINE/MIR	41	260	(8)	55444
614	28.6	8.7	0.9	chr1	29182217	29182438	(219773984)	+	MIRb	SINE/MIR	28	268	(0)	56089
199	15.9	1.2	1.9	chr1	29707258	29707649	(219248773)	+	G-rich	Low_complexity	1	389	(0)	57129
523	31.5	2.0	1.0	chr1	30657572	30657770	(218298652)	+	MLT1I	LTR/ERVL-MaLR	2	202	(209)	58792
14	7.8	0.0	6.5	chr1	30657907	30657937	(218298485)	+	(CAGCC)n	Simple_repeat	1	31	(0)	58793
2541	4.8	0.3	1.0	chr1	30717643	30717952	(218238470)	C	AluY	SINE/Alu	(3)	308	1	58908
560	28.1	5.6	0.0	chr1	30720908	30721092	(218235330)	C	MIR	SINE/MIR	(54)	208	13	58911
71	30.8	2.0	0.4	chr1	30732147	30732394	(218224028)	+	(GT)n	Simple_repeat	1	253	(0)	58936
17	13.7	5.0	0.0	chr1	30807386	30807425	(218148997)	+	(CCCCGCC)n	Simple_repeat	1	42	(0)	59119
282	31.7	4.9	7.6	chr1	31082312	31082509	(217873913)	+	L1M5	LINE/L1	4172	4378	(1768)	59729
1291	17.8	0.4	12.2	chr1	31082512	31082645	(217873777)	+	AluJb	SINE/Alu	1	127	(185)	59739
2135	8.7	2.7	4.0	chr1	31082646	31082943	(217873479)	+	AluSq	SINE/Alu	1	294	(19)	59740
443	19.8	0.0	5.5	chr1	31136027	31136063	(217820359)	+	AluJr4	SINE/Alu	157	192	(120)	59911
4599	13.3	7.2	7.2	chr1	31136064	31136589	(217819833)	+	LTR1E	LTR/ERV1	1	536	(268)	59912
51	30.6	2.7	3.0	chr1	31154953	31155209	(217801213)	+	G-rich	Low_complexity	1	264	(0)	59976
18	24.4	2.1	0.0	chr1	31239383	31239430	(217716992)	+	(CA)n	Simple_repeat	1	49	(0)	60220
391	28.4	1.7	2.5	chr1	31724024	31724142	(217232280)	C	MIRc	SINE/MIR	(41)	227	110	61213
14	18.6	2.7	0.0	chr1	31761018	31761054	(217195368)	+	G-rich	Low_complexity	1	38	(0)	61271
777	31.6	12.2	1.8	chr1	31768147	31768870	(217187552)	+	L2a	LINE/L2	2598	3426	(0)	61280
3656	22.9	11.8	5.4	chr1	31857360	31858043	(217098379)	C	L2a	LINE/L2	(985)	2434	1681	61478
2916	16.4	3.1	4.1	chr1	32009055	32009614	(216946808)	+	MLT2B3	LTR/ERVL	1	554	(0)	61865
277	20.4	13.2	8.6	chr1	32540386	32540528	(216415894)	C	MIRc	SINE/MIR	(5)	263	113	63102
324	25.0	9.7	0.9	chr1	32769508	32769620	(216186802)	C	MER103C	DNA/hAT-Charlie	(154)	143	20	63697
893	27.5	12.3	4.2	chr1	32875279	32875996	(216080426)	C	L2a	LINE/L2	(1)	3425	2635	63934
15	12.2	6.0	5.7	chr1	32886433	32886482	(216069940)	+	(CCG)n	Simple_repeat	1	53	(0)	63958
1875	17.0	1.3	1.0	chr1	35746387	35746697	(213209725)	C	AluJb	SINE/Alu	(0)	312	1	69375
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
19	11.5	2.5	2.4	chr1	36157018	36157057	(212799365)	+	GA-rich	Low_complexity	1	41	(0)	70249
13	34.7	0.0	0.0	chr1	36157095	36157152	(212799270)	+	G-rich	Low_complexity	1	58	(0)	70250
351	30.0	5.9	1.6	chr1	36223857	36224071	(212732351)	C	MIRc	SINE/MIR	(9)	259	29	70423
2170	9.4	2.0	0.0	chr1	37554443	37554739	(211401683)	+	AluSz6	SINE/Alu	1	303	(9)	72993
326	30.9	4.8	1.4	chr1	37633109	37633249	(211323173)	C	MIRb	SINE/MIR	(73)	195	50	73125
328	36.6	5.8	0.0	chr1	37673762	37673955	(211282467)	C	MIRc	SINE/MIR	(45)	223	18	73214
14	16.4	2.9	0.0	chr1	37946923	37946956	(211009466)	+	(CCTGC)n	Simple_repeat	1	35	(0)	73787
313	17.4	17.3	2.3	chr1	38004770	38004857	(210951565)	+	Arthur1B	DNA/hAT-Tip100	1	104	(1121)	73896
223	19.7	9.0	1.4	chr1	38122878	38122949	(210833473)	+	L3	LINE/CR1	3934	4011	(88)	74128
1974	14.8	1.0	3.0	chr1	38241756	38242060	(210714362)	C	AluJr4	SINE/Alu	(13)	299	1	74339
552	25.0	11.2	2.8	chr1	38728637	38728836	(210227586)	+	MIRc	SINE/MIR	14	231	(37)	75215
732	23.3	10.4	4.9	chr1	38785727	38786230	(210170192)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	1	75330
656	15.6	0.0	0.0	chr1	38962627	38962722	(209993700)	C	AluSx3	SINE/Alu	(15)	296	201	75727
796	11.7	0.0	0.0	chr1	38962732	38962834	(209993588)	C	AluJo	SINE/Alu	(209)	103	1	75728
5169	11.7	4.9	2.9	chr1	38973209	38973412	(209983010)	+	LTR1A2	LTR/ERV1	1	227	(610)	75761
2193	11.0	2.7	0.0	chr1	38973413	38973704	(209982718)	+	AluSz	SINE/Alu	1	300	(12)	75762
1857	12.6	3.7	5.0	chr1	39217598	39217899	(209738523)	+	AluSz	SINE/Alu	2	299	(13)	76334
15	29.0	1.3	3.9	chr1	39408603	39408678	(209547744)	+	G-rich	Low_complexity	1	77	(0)	76676
2586	4.6	0.0	0.7	chr1	39559788	39560089	(209396333)	C	AluY	SINE/Alu	(11)	300	1	76931
13	11.6	0.0	6.2	chr1	39639687	39639718	(209316704)	+	(CCCGG)n	Simple_repeat	1	32	(0)	77114
13	3.6	2.9	8.6	chr1	40665612	40665645	(208290777)	+	(GCTCC)n	Simple_repeat	1	35	(0)	79269
198	29.8	18.4	3.0	chr1	41014947	41015216	(207941206)	C	L2c	LINE/L2	(370)	3049	2729	80046
390	28.2	3.7	5.2	chr1	41516381	41516571	(207439851)	+	L2a	LINE/L2	2485	2672	(747)	80956
35	0.0	0.0	0.0	chr1	42166116	42166145	(206790277)	+	(GT)n	Simple_repeat	1	30	(0)	82036
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
21	13.0	0.0	4.3	chr1	42817424	42817469	(206138953)	+	G-rich	Low_complexity	1	46	(0)	83212
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
503	29.4	9.3	0.8	chr1	42963300	42963546	(205992876)	+	L2b	LINE/L2	2363	2632	(787)	83439
14	24.5	2.9	4.3	chr1	43349055	43349122	(205607300)	+	G-rich	Low_complexity	1	70	(0)	84191
32	8.7	0.0	0.0	chr1	43367820	43367868	(205588554)	+	(CTGGGCAGGG)n	Simple_repeat	1	49	(0)	84223
1105	26.4	13.4	2.8	chr1	43626885	43627155	(205329267)	C	L2a	LINE/L2	(219)	3207	2911	84577
799	20.1	7.0	1.1	chr1	43627183	43627358	(205329064)	C	L2a	LINE/L2	(750)	2669	2483	84577
2459	5.8	0.7	1.9	chr1	43649227	43649536	(205306886)	C	AluSp	SINE/Alu	(7)	306	1	84647
308	26.5	3.0	1.0	chr1	43649615	43649713	(205306709)	C	MER81	DNA/hAT-Blackjack	(12)	102	2	84648
214	22.8	2.2	0.0	chr1	44270912	44270981	(204685441)	C	MIRb	SINE/MIR	(30)	238	162	85761
200	29.1	12.4	2.6	chr1	44271273	44271424	(204684998)	+	L2c	LINE/L2	2991	3159	(228)	85762
847	21.8	10.2	0.0	chr1	44271479	44271680	(204684742)	+	MIR	SINE/MIR	2	226	(36)	85763
15	21.2	0.0	2.5	chr1	44355120	44355159	(204601263)	+	(GGC)n	Simple_repeat	1	40	(0)	85869
16	14.2	0.0	0.0	chr1	44405661	44405691	(204550731)	+	(GGACTG)n	Simple_repeat	1	31	(0)	85974
13	25.4	0.0	4.0	chr1	44406210	44406259	(204550163)	+	G-rich	Low_complexity	1	50	(0)	85975
13	15.5	0.0	3.2	chr1	44813962	44813992	(204142430)	+	G-rich	Low_complexity	1	31	(0)	86752
98	9.3	5.0	1.1	chr1	44814128	44814285	(204142137)	+	(TCTT)n	Simple_repeat	1	167	(0)	86753
13	21.9	0.0	2.6	chr1	45303630	45303668	(203652754)	+	(GGAGCC)n	Simple_repeat	1	39	(0)	87710
210	38.8	1.2	0.0	chr1	46495681	46495765	(202460657)	+	MIR	SINE/MIR	79	164	(98)	90137
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
1013	16.2	2.6	2.6	chr1	46719615	46719804	(202236618)	+	MER53	DNA/hAT	1	190	(3)	90533
1085	24.2	16.1	6.3	chr1	46719805	46720209	(202236213)	C	L2a	LINE/L2	(111)	3315	2800	90532
26	5.4	0.0	2.4	chr1	47024002	47024042	(201932380)	+	(GGAGGGA)n	Simple_repeat	1	41	(0)	90860
21	11.3	1.8	7.1	chr1	47024043	47024056	(201932366)	+	GA-rich	Low_complexity	2	53	(0)	90861
26	18.6	3.1	6.1	chr1	47508214	47508309	(201448113)	+	G-rich	Low_complexity	1	99	(0)	91745
190	29.9	11.5	11.3	chr1	47545757	47546093	(201410329)	+	L2c	LINE/L2	2929	3284	(103)	91830
300	31.9	3.6	17.0	chr1	47546094	47546316	(201410106)	+	MER91A	DNA/hAT-Tip100	4	195	(1)	91834
15	27.1	1.5	4.4	chr1	47996718	47996784	(200959638)	+	(CGG)n	Simple_repeat	1	68	(0)	92700
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
334	34.5	7.9	2.9	chr1	48051454	48051626	(200904796)	+	L2b	LINE/L2	3188	3369	(6)	92815
14	20.7	0.0	6.0	chr1	50332915	50332964	(198623458)	+	(CCCCAC)n	Simple_repeat	1	50	(0)	96594
16	13.3	0.0	2.9	chr1	50332944	50332978	(198623444)	+	(CCAGAA)n	Simple_repeat	1	35	(0)	96595
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
23	13.7	2.7	7.8	chr1	51519364	51519438	(197436984)	+	(CCCG)n	Simple_repeat	1	77	(0)	98834
244	31.8	7.0	0.9	chr1	51519558	51519665	(197436757)	+	MIRb	SINE/MIR	88	202	(66)	98835
800	22.9	5.9	6.3	chr1	51637078	51637210	(197319212)	+	MIR	SINE/MIR	14	149	(113)	99154
1967	11.6	6.1	0.0	chr1	51637211	51637503	(197318919)	+	AluSq	SINE/Alu	2	313	(0)	99155
14	18.9	0.0	2.6	chr1	51990620	51990657	(196965765)	+	G-rich	Low_complexity	1	38	(0)	99906
11	17.7	5.0	2.4	chr1	52179292	52179331	(196777091)	+	(AGAGACA)n	Simple_repeat	1	42	(0)	100342
2329	12.3	0.3	0.0	chr1	52179353	52179645	(196776777)	+	AluSx	SINE/Alu	1	294	(18)	100343
12	18.7	4.3	4.2	chr1	52366414	52366459	(196589963)	+	(CTCG)n	Simple_repeat	1	48	(0)	100700
18	24.3	0.0	3.9	chr1	53084680	53084731	(195871691)	+	(CA)n	Simple_repeat	1	52	(0)	102422
390	27.6	3.7	10.9	chr1	53110180	53110361	(195846061)	C	MIR3	SINE/MIR	(15)	193	10	102463
713	29.6	19.4	2.7	chr1	53110950	53111862	(195844560)	C	L2a	LINE/L2	(7)	3419	2260	102465
637	31.9	8.8	1.5	chr1	53172758	53173146	(195783276)	+	L2c	LINE/L2	2924	3343	(44)	102589
283	32.6	13.4	0.0	chr1	53173163	53173291	(195783131)	+	MIRb	SINE/MIR	104	252	(16)	102590
15	13.2	3.0	0.0	chr1	53326264	53326308	(195630114)	+	G-rich	Low_complexity	1	46	(0)	102873
13	12.7	0.0	0.0	chr1	53509477	53509502	(195446920)	+	(GGGAG)n	Simple_repeat	1	26	(0)	103218
230	23.3	1.6	0.0	chr1	53582470	53582529	(195373893)	+	MIR3	SINE/MIR	81	141	(67)	103345
13	15.8	0.0	7.3	chr1	54117713	54117753	(194838669)	+	G-rich	Low_complexity	1	41	(0)	104449
329	18.3	3.5	10.9	chr1	54163349	54163440	(194792982)	C	MIR3	SINE/MIR	(14)	194	110	104557
415	24.5	9.9	0.5	chr1	54215602	54215737	(194740685)	+	MIR3	SINE/MIR	20	168	(40)	104688
408	29.7	10.7	3.0	chr1	54219023	54219324	(194737098)	C	LTR16	LTR/ERVL	(49)	389	62	104694
196	25.4	5.6	0.0	chr1	54219330	54219396	(194737026)	C	MIRb	SINE/MIR	(178)	90	20	104695
15	25.1	2.2	2.2	chr1	54409708	54409752	(194546670)	+	(TC)n	Simple_repeat	1	46	(0)	105005
323	29.8	6.9	10.2	chr1	54481535	54481818	(194474604)	C	L2c	LINE/L2	(0)	3387	3114	105180
190	17.6	0.0	0.0	chr1	54490344	54490377	(194466045)	+	MIR1_Amn	SINE/MIR	116	149	(81)	105200
15	15.0	0.0	0.0	chr1	54490505	54490534	(194465888)	+	(CTCC)n	Simple_repeat	1	30	(0)	105201
30	0.0	9.3	0.0	chr1	54490553	54490595	(194465827)	+	(CCCCT)n	Simple_repeat	1	47	(0)	105202
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
356	17.3	8.0	2.7	chr1	55277366	55277479	(193678943)	C	MER5B	DNA/hAT-Charlie	(35)	154	36	106768
183	19.1	8.7	1.6	chr1	55277488	55277551	(193678871)	+	MIRc	SINE/MIR	60	128	(140)	106769
323	20.5	19.3	0.5	chr1	55506866	55506979	(193449443)	+	MIRc	SINE/MIR	20	142	(126)	107221
1500	19.2	9.5	1.5	chr1	56764745	56765072	(192191350)	C	MLT1A	LTR/ERVL-MaLR	(17)	357	1	109456
235	31.5	1.1	0.0	chr1	56797451	56797539	(192158883)	+	LTR67B	LTR/ERVL	37	126	(494)	109520
247	32.5	5.8	0.0	chr1	58825308	58825421	(190131001)	+	L2c	LINE/L2	3014	3134	(241)	113602
215	27.2	17.4	0.9	chr1	58903525	58903639	(190052783)	C	MIRb	SINE/MIR	(12)	256	119	113783
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
218	17.9	9.5	6.9	chr1	58922673	58922744	(190033678)	+	MIR1_Amn	SINE/MIR	85	158	(72)	113823
317	29.2	14.8	5.3	chr1	59444968	59445137	(189511285)	+	L2c	LINE/L2	3193	3381	(6)	114883
16	19.3	0.0	8.1	chr1	61742354	61742415	(187214007)	+	(CCCGCCC)n	Simple_repeat	1	62	(0)	118746
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
19	0.0	0.0	0.0	chr1	62783687	62783707	(186172715)	+	(T)n	Simple_repeat	1	21	(0)	120815
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
902	18.7	0.6	0.0	chr1	64236832	64237002	(184719420)	+	MER5B	DNA/hAT-Charlie	1	172	(6)	123526
220	40.4	2.5	1.3	chr1	64237003	64237160	(184719262)	+	MIR1_Amn	SINE/MIR	15	174	(56)	123527
17	7.9	0.0	0.0	chr1	65147483	65147509	(183808913)	+	(GGAGT)n	Simple_repeat	1	27	(0)	125211
18	21.5	0.0	0.0	chr1	65148145	65148187	(183808235)	+	GA-rich	Low_complexity	1	43	(0)	125212
12	22.0	2.7	0.0	chr1	65148891	65148927	(183807495)	+	(CCGTACC)n	Simple_repeat	1	38	(0)	125213
23831	7.7	0.7	0.8	chr1	65462003	65468172	(183488250)	C	L1PA6	LINE/L1	(11)	6316	178	125830
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
17	20.4	0.0	5.4	chr1	67684975	67685030	(181271392)	+	(CCCGCC)n	Simple_repeat	1	56	(0)	129413
14	25.5	0.0	4.0	chr1	71047615	71047664	(177908758)	+	(GCG)n	Simple_repeat	1	50	(0)	134342
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
558	28.4	0.6	1.8	chr1	84272321	84272485	(164683937)	+	Arthur1A	DNA/hAT-Tip100	1	163	(14)	152290
23362	8.5	1.2	1.4	chr1	84442767	84449240	(164507182)	+	L1PA7	LINE/L1	1	6468	(1)	152531
13	14.7	3.3	0.0	chr1	84506304	84506333	(164450089)	+	GA-rich	Low_complexity	1	31	(0)	152616
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
22	14.0	2.0	2.0	chr1	84997144	84997198	(163959224)	+	(CGCCC)n	Simple_repeat	1	55	(0)	153435
14	18.1	0.0	4.9	chr1	85576601	85576608	(163379814)	+	(CCCACA)n	Simple_repeat	1	39	(0)	154397
19	14.2	0.0	0.0	chr1	85576609	85576639	(163379783)	+	(CA)n	Simple_repeat	1	31	(0)	154398
15	15.5	0.0	5.0	chr1	87331556	87331595	(161624827)	+	G-rich	Low_complexity	1	40	(0)	156913
19	23.8	3.8	3.7	chr1	87331621	87331699	(161624723)	+	GA-rich	Low_complexity	1	82	(0)	156914
15	3.7	7.1	0.0	chr1	88992551	88992578	(159963844)	+	(GCGCC)n	Simple_repeat	1	30	(0)	159336
3799	12.9	8.3	18.3	chr1	89952738	89953657	(159002765)	+	LTR8B	LTR/ERV1	1	820	(0)	160606
13	8.1	0.0	6.7	chr1	91876098	91876127	(157080295)	+	(GGGGT)n	Simple_repeat	1	30	(0)	163393
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
17	17.2	0.0	7.5	chr1	91886335	91886345	(157070077)	+	(CTC)n	Simple_repeat	3	53	(0)	163410
1313	18.9	5.1	5.6	chr1	92091962	92092118	(156864304)	+	MLT1A	LTR/ERVL-MaLR	1	158	(216)	163872
1716	17.7	2.9	0.7	chr1	92092119	92092417	(156864005)	+	AluJb	SINE/Alu	1	306	(6)	163873
3338	8.3	0.7	0.0	chr1	93442186	93442619	(155513803)	C	LTR3B	LTR/ERVK	(0)	437	1	166307
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
29	0.0	0.0	0.0	chr1	93847897	93847923	(155108499)	+	(GCG)n	Simple_repeat	1	27	(0)	166926
305	28.0	3.3	2.5	chr1	93848110	93848230	(155108192)	C	MER5A	DNA/hAT-Charlie	(16)	173	52	166927
13	23.7	1.9	3.7	chr1	94927275	94927327	(154029095)	+	(CCCGCC)n	Simple_repeat	1	54	(0)	168517
17	15.9	4.8	0.0	chr1	95117298	95117339	(153839083)	+	(GCCGGA)n	Simple_repeat	1	44	(0)	168893
31	22.1	2.0	4.8	chr1	95234014	95234115	(153722307)	+	(GCCCC)n	Simple_repeat	1	104	(0)	169060
567	27.1	10.3	0.5	chr1	100543604	100543822	(148412600)	C	MER115	DNA/hAT-Tip100	(450)	243	1	176731
15	5.6	0.0	0.0	chr1	101235588	101235606	(147720816)	+	(T)n	Simple_repeat	1	19	(0)	177735
27	0.0	0.0	0.0	chr1	101236730	101236755	(147719667)	+	(T)n	Simple_repeat	1	26	(0)	177736
21429	10.0	1.0	2.7	chr1	108203429	108209902	(140746520)	C	L1PA7	LINE/L1	(4)	6465	2	186516
34	5.2	0.0	0.0	chr1	108560105	108560144	(140396278)	+	(GGC)n	Simple_repeat	1	40	(0)	186918
36	2.7	0.0	0.0	chr1	108956875	108956912	(139999510)	+	(GGGAGGCG)n	Simple_repeat	1	38	(0)	187632
796	28.4	17.9	1.3	chr1	108956913	108957180	(139999242)	C	L2a	LINE/L2	(459)	2960	2621	187626
46	20.3	0.8	3.3	chr1	109042229	109042348	(139914074)	+	(GGCGG)n	Simple_repeat	1	121	(0)	187838
818	16.5	0.0	1.5	chr1	109056283	109056415	(139900007)	+	FLAM_C	SINE/Alu	1	131	(12)	187875
12	13.9	6.2	0.0	chr1	109213804	109213835	(139742587)	+	(CTCCC)n	Simple_repeat	1	34	(0)	188239
15	17.7	2.6	0.0	chr1	110210231	110210268	(138746154)	+	(GCGCC)n	Simple_repeat	1	39	(0)	189740
387	29.1	5.3	4.3	chr1	110338041	110338320	(138618102)	+	Charlie16a	DNA/hAT-Charlie	44	326	(16)	189971
15	5.6	0.0	0.0	chr1	111593006	111593024	(137363398)	+	(AG)n	Simple_repeat	1	19	(0)	191763
659	22.6	4.1	2.4	chr1	112699126	112699293	(136257129)	+	MER5B	DNA/hAT-Charlie	8	178	(0)	193611
195	34.0	13.8	0.0	chr1	112699308	112699413	(136257009)	C	MER5A	DNA/hAT-Charlie	(66)	123	1	193612
12	23.7	4.6	4.4	chr1	112715463	112715527	(136240895)	+	(CCCCGG)n	Simple_repeat	1	68	(0)	193631
1810	22.7	13.3	11.2	chr1	113242364	113242855	(135713567)	C	MLT1G3	LTR/ERVL-MaLR	(61)	534	1	194737
230	26.4	6.5	0.0	chr1	113242883	113242969	(135713453)	+	Tigger12c	DNA/TcMar-Tigger	193	285	(449)	194739
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
2068	12.4	0.7	0.0	chr1	113773243	113773525	(135182897)	+	AluSz6	SINE/Alu	1	285	(27)	195488
2340	6.7	0.0	0.3	chr1	113906047	113906357	(135050065)	C	AluSz	SINE/Alu	(0)	312	1	195762
594	24.2	8.0	2.6	chr1	115831271	115831541	(133124881)	C	L1MC5a	LINE/L1	(18)	2759	2473	198772
16	22.7	5.2	3.7	chr1	117121531	117121613	(131834809)	+	(CCCGCCA)n	Simple_repeat	1	84	(0)	200776
17517	14.6	3.4	1.1	chr1	117841955	117845411	(131111011)	+	L1PA13	LINE/L1	1	3549	(3217)	201881
326	21.5	9.0	0.0	chr1	117857610	117857708	(131098714)	C	MIR	SINE/MIR	(46)	162	54	201909
452	27.3	9.5	0.7	chr1	117857713	117857856	(131098566)	C	MER5A1	DNA/hAT-Charlie	(7)	159	2	201910
5038	8.5	0.5	0.1	chr1	119774601	119775258	(129181164)	C	PABL_A	LTR/ERV1	(0)	660	1	204521
278	29.9	3.8	7.3	chr1	119775259	119775272	(129181150)	+	L1MEh	LINE/L1	138	147	(2088)	204520
2040	27.2	12.2	5.3	chr1	119775358	119776230	(129180192)	+	L1MEh	LINE/L1	360	1297	(938)	204520
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
2574	22.6	4.1	4.2	chr1	149894742	149895340	(99061082)	+	L1MC4	LINE/L1	7221	7836	(206)	217954
2675	25.5	9.6	7.6	chr1	150165750	150166397	(98790025)	+	ERV3-16A3_I-int	LTR/ERVL	233	901	(4325)	218435
2388	9.3	0.3	0.0	chr1	150493478	150493777	(98462645)	+	AluSp	SINE/Alu	7	307	(6)	219195
17	11.5	5.3	0.0	chr1	151716802	151716839	(97239583)	+	(CCTCCCC)n	Simple_repeat	1	40	(0)	221783
2127	9.9	2.3	0.0	chr1	151809117	151809419	(97147003)	+	AluSx1	SINE/Alu	1	310	(2)	221921
681	30.6	7.4	8.9	chr1	151809420	151809658	(97146764)	C	L2a	LINE/L2	(585)	2834	2610	221920
13	4.5	0.0	7.4	chr1	151945813	151945839	(97010583)	+	(AACA)n	Simple_repeat	1	27	(0)	222171
1117	19.3	6.9	0.0	chr1	152035944	152036171	(96920251)	C	MER58B	DNA/hAT-Charlie	(93)	248	4	222294
12	13.9	11.9	3.0	chr1	152048316	152048374	(96908048)	+	(GGCTGT)n	Simple_repeat	1	66	(0)	222321
14	17.5	0.0	0.0	chr1	153542295	153542326	(95414096)	+	(CCACC)n	Simple_repeat	1	32	(0)	224258
633	15.4	0.8	12.8	chr1	153577561	153577709	(95378713)	C	FLAM_A	SINE/Alu	(11)	131	1	224319
16	11.6	0.0	0.0	chr1	153697382	153697409	(95259013)	+	(CAGG)n	Simple_repeat	1	28	(0)	224564
358	26.0	2.8	0.9	chr1	153698435	153698539	(95257883)	C	MIRc	SINE/MIR	(0)	268	162	224565
13	13.1	0.0	0.0	chr1	153922689	153922713	(95033709)	+	(CGGG)n	Simple_repeat	1	25	(0)	225074
19	25.9	0.0	4.5	chr1	153958837	153958903	(94997519)	+	GA-rich	Low_complexity	1	67	(0)	225135
12	7.9	7.4	0.0	chr1	154179363	154179389	(94777033)	+	A-rich	Low_complexity	1	29	(0)	225621
914	12.0	0.0	4.2	chr1	154351952	154352093	(94604329)	+	FLAM_C	SINE/Alu	1	136	(7)	225965
563	27.6	3.5	7.9	chr1	154430745	154430984	(94525438)	C	MIRb	SINE/MIR	(7)	261	33	226165
209	17.0	0.0	7.8	chr1	154431009	154431059	(94525363)	+	MamTip2	DNA/hAT-Tip100	187	233	(72)	226166
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
17	32.0	3.0	2.9	chr1	155002310	155002409	(93954013)	+	G-rich	Low_complexity	1	103	(0)	227187
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
15	10.4	3.0	2.9	chr1	155070016	155070048	(93886374)	+	GA-rich	Low_complexity	1	34	(0)	227291
1893	16.0	0.7	0.7	chr1	155099476	155099768	(93856654)	+	AluJr	SINE/Alu	1	293	(19)	227334
22	27.7	4.9	0.0	chr1	155126503	155126584	(93829838)	+	(CA)n	Simple_repeat	1	86	(0)	227410
16	15.4	2.8	0.0	chr1	155127738	155127773	(93828649)	+	(CCTCC)n	Simple_repeat	1	37	(0)	227411
17	11.6	0.0	7.0	chr1	155127801	155127843	(93828579)	+	G-rich	Low_complexity	1	43	(0)	227412
18	9.1	2.6	5.0	chr1	155193006	155193044	(93763378)	+	(CCT)n	Simple_repeat	1	40	(0)	227523
20	22.8	1.8	0.0	chr1	155208685	155208740	(93747682)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	227541
11	21.1	2.5	2.4	chr1	155962272	155962311	(92994111)	+	(GGCCCT)n	Simple_repeat	1	41	(0)	229192
289	25.1	14.8	2.4	chr1	155962313	155962450	(92993972)	+	MIRc	SINE/MIR	104	262	(6)	229193
14	15.9	2.1	6.1	chr1	155966779	155966826	(92989596)	+	(CTGCCCT)n	Simple_repeat	1	49	(0)	229200
40	4.5	0.0	0.0	chr1	156053813	156053858	(92902564)	+	(CTCCC)n	Simple_repeat	1	46	(0)	229383
2173	11.4	0.0	0.3	chr1	156125406	156125702	(92830720)	+	AluSx1	SINE/Alu	1	296	(16)	229537
12	15.6	3.5	0.0	chr1	156127011	156127039	(92829383)	+	(CTGCC)n	Simple_repeat	1	30	(0)	229540
13	15.7	2.7	2.7	chr1	156500883	156500931	(92455491)	+	G-rich	Low_complexity	1	49	(0)	230238
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
2236	8.4	0.3	3.9	chr1	156501904	156502213	(92454209)	C	AluSz	SINE/Alu	(11)	301	3	230241
42	0.0	0.0	0.0	chr1	156661556	156661591	(92294831)	+	(GT)n	Simple_repeat	1	36	(0)	230533
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
2074	13.9	0.3	1.9	chr1	156892574	156892753	(92063669)	C	AluJb	SINE/Alu	(0)	312	138	230942
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
622	11.2	0.0	1.1	chr1	159916989	159917077	(89039345)	+	AluSz	SINE/Alu	49	136	(176)	234956
13	21.9	1.9	5.6	chr1	159945550	159945602	(89010820)	+	(CTCCG)n	Simple_repeat	1	54	(0)	234978
39	21.7	0.0	7.8	chr1	160098681	160098822	(88857600)	+	(CGCCC)n	Simple_repeat	1	142	(0)	235224
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
9342	6.9	0.9	11.2	chr1	160932625	160934166	(88022256)	+	SVA_B	Retroposon/SVA	1	1381	(2)	236497
2178	11.2	0.0	2.5	chr1	160978239	160978552	(87977870)	C	AluSz	SINE/Alu	(6)	306	1	236608
1579	14.5	2.8	2.1	chr1	160978553	160978597	(87977825)	+	MER34C2	LTR/ERV1	417	459	(96)	236607
1764	17.1	0.7	1.0	chr1	160978655	160978952	(87977470)	+	AluJb	SINE/Alu	4	300	(12)	236609
271	10.5	0.0	0.0	chr1	160989981	160990018	(87966404)	C	L1MC4a	LINE/L1	(2397)	5485	5448	236635
2426	8.2	0.0	1.0	chr1	160990101	160990406	(87966016)	+	AluSq2	SINE/Alu	1	303	(10)	236639
185	27.3	0.0	0.0	chr1	161076765	161076808	(87879614)	+	L2b	LINE/L2	3316	3359	(16)	236828
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
20	0.0	0.0	0.0	chr1	161225920	161225941	(87730481)	+	(T)n	Simple_repeat	1	22	(0)	237108
645	1.4	0.0	0.0	chr1	161540241	161540314	(87416108)	+	tRNA-Asn-AAC	tRNA	1	74	(3)	237691
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
16	26.9	0.0	0.0	chr1	162561485	162561533	(86394889)	+	(CCGCGT)n	Simple_repeat	1	49	(0)	239383
13	19.8	0.0	2.7	chr1	162561644	162561680	(86394742)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	239384
32	0.0	0.0	0.0	chr1	165393196	165393225	(83563197)	+	(TCTGTGG)n	Simple_repeat	1	30	(0)	243552
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
308	22.4	12.7	14.3	chr1	167936971	167937179	(81019243)	C	L1MDb	LINE/L1	(5653)	756	552	247570
455	34.3	6.0	3.5	chr1	168397577	168397807	(80558615)	+	MIRc	SINE/MIR	8	253	(15)	248335
14	19.3	1.6	7.9	chr1	169106093	169106154	(79850268)	+	(CGCGCC)n	Simple_repeat	1	63	(0)	249448
13	5.3	0.0	0.0	chr1	169367760	169367779	(79588643)	+	(CAC)n	Simple_repeat	1	20	(0)	249846
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
2400	16.5	3.3	2.4	chr1	177220247	177220668	(71735754)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	261372
14	21.1	0.0	6.1	chr1	178094013	178094061	(70862361)	+	(GGC)n	Simple_repeat	1	49	(0)	262570
14	15.8	0.0	5.1	chr1	178094065	178094103	(70862319)	+	(CCCAG)n	Simple_repeat	1	39	(0)	262571
14	19.3	6.4	0.0	chr1	178094104	178094109	(70862313)	+	(CCCCAG)n	Simple_repeat	3	50	(0)	262572
440	12.6	5.4	3.3	chr1	178353735	178353824	(70602598)	C	MLT1E1A	LTR/ERVL-MaLR	(529)	151	60	262958
1011	16.1	0.6	1.9	chr1	178353826	178353986	(70602436)	+	AluJb	SINE/Alu	140	298	(14)	262959
330	25.6	18.2	4.3	chr1	178382508	178382706	(70573716)	+	MIR	SINE/MIR	1	246	(22)	263010
395	10.2	5.5	1.4	chr1	178382707	178382776	(70573646)	+	MADE1	DNA/TcMar-Mariner	3	75	(5)	263011
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
1629	15.2	7.9	0.0	chr1	181043442	181043698	(67912724)	+	AluJr	SINE/Alu	2	280	(32)	267359
18	19.2	2.7	6.6	chr1	181105313	181105386	(67851036)	+	(GCGCGG)n	Simple_repeat	1	76	(0)	267473
1933	14.8	0.3	4.1	chr1	181115917	181116110	(67840312)	C	AluJr	SINE/Alu	(4)	308	126	267492
1986	15.1	0.7	1.3	chr1	181116111	181116414	(67840008)	+	AluSz6	SINE/Alu	1	302	(10)	267493
4477	13.3	0.0	3.9	chr1	182002621	182003294	(66953128)	C	LTR1C1	LTR/ERV1	(0)	648	1	268714
10924	10.7	3.8	1.5	chr1	182003320	182005087	(66951335)	+	L1PB1	LINE/L1	1	1809	(5054)	268715
1497	10.3	17.1	0.0	chr1	182362426	182362683	(66593739)	C	AluSz6	SINE/Alu	(0)	312	2	269348
193	37.3	7.3	2.2	chr1	182617590	182617811	(66338611)	+	MIRc	SINE/MIR	20	253	(15)	269758
230	32.7	11.0	5.8	chr1	182617930	182618101	(66338321)	C	MamRTE1	LINE/RTE-BovB	(3551)	261	80	269759
12	17.0	2.2	6.5	chr1	182679801	182679845	(66276577)	+	(CTCCCA)n	Simple_repeat	1	46	(0)	269860
266	39.6	1.9	0.9	chr1	182679850	182680063	(66276359)	+	L2c	LINE/L2	2481	2696	(723)	269859
7639	12.2	2.3	1.2	chr1	182977303	182978519	(65977903)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	2	270378
54	11.6	2.8	2.7	chr1	183023087	183023194	(65933228)	+	(CCCTC)n	Simple_repeat	1	111	(0)	270460
14	11.3	3.5	0.0	chr1	183023367	183023395	(65933027)	+	(ACCCC)n	Simple_repeat	1	30	(0)	270461
2090	11.8	1.7	0.3	chr1	183079966	183080253	(65876169)	+	AluSx	SINE/Alu	5	296	(16)	270545
2333	9.2	0.0	0.3	chr1	183585344	183585638	(65370784)	+	AluSg	SINE/Alu	1	294	(16)	271372
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
423	29.4	3.0	4.7	chr1	184425994	184426164	(64530258)	C	L3	LINE/CR1	(848)	3251	3084	272629
1550	17.3	15.2	0.6	chr1	184502111	184502458	(64453964)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	272751
196	35.8	1.0	5.0	chr1	185152215	185152314	(63804108)	C	L2c	LINE/L2	(68)	3319	3224	273830
181	32.2	6.2	5.7	chr1	185152407	185152600	(63803822)	C	L2c	LINE/L2	(433)	2986	2792	273830
18	14.7	4.3	2.0	chr1	197201312	197201358	(51755064)	+	(CCCCT)n	Simple_repeat	1	49	(0)	289611
2445	8.6	1.0	0.0	chr1	199778045	199778345	(49178077)	+	AluSx	SINE/Alu	1	304	(8)	292981
251	34.2	10.1	2.4	chr1	200427694	200427858	(48528564)	C	MamRTE1	LINE/RTE-BovB	(1029)	2783	2605	294234
1817	13.4	0.0	6.5	chr1	200427908	200428214	(48528208)	+	AluJo	SINE/Alu	5	291	(21)	294235
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
412	31.1	13.0	3.3	chr1	201344557	201345132	(47611290)	+	L2c	LINE/L2	2512	3152	(235)	295862
455	23.0	4.4	0.6	chr1	201480658	201480810	(47475612)	+	MER5B	DNA/hAT-Charlie	5	161	(28)	296098
17	24.1	0.0	2.0	chr1	201480833	201480883	(47475539)	+	(GGCGG)n	Simple_repeat	1	51	(0)	296099
531	26.0	3.2	9.5	chr1	201618613	201618812	(47337610)	+	MIRb	SINE/MIR	14	202	(66)	296377
291	38.0	0.0	0.9	chr1	201828887	201829000	(47127422)	+	MIR3	SINE/MIR	20	132	(76)	296703
2139	11.8	1.0	3.3	chr1	202006584	202006888	(46949534)	+	AluSz	SINE/Alu	2	299	(13)	297029
1966	14.0	0.0	3.6	chr1	202006889	202007049	(46949373)	+	AluJo	SINE/Alu	137	297	(15)	297028
15	18.9	2.2	4.3	chr1	202023068	202023113	(46933309)	+	(CCT)n	Simple_repeat	1	47	(0)	297058
12	12.6	2.5	7.3	chr1	202087266	202087305	(46869117)	+	GA-rich	Low_complexity	1	41	(0)	297237
458	32.4	9.7	3.5	chr1	202104029	202104316	(46852106)	C	L2c	LINE/L2	(0)	3387	3080	297294
1301	11.4	0.6	0.0	chr1	202104323	202104497	(46851925)	+	AluSq2	SINE/Alu	135	310	(3)	297295
189	31.2	6.8	5.7	chr1	202113560	202113807	(46842615)	+	L2a	LINE/L2	2972	3222	(165)	297312
2475	7.4	0.0	0.0	chr1	202118390	202118687	(46837735)	C	AluSg	SINE/Alu	(12)	298	1	297330
16	24.1	0.0	2.2	chr1	202144755	202144800	(46811622)	+	(CCG)n	Simple_repeat	1	46	(0)	297386
1871	24.1	5.6	1.9	chr1	202211670	202212205	(46744217)	C	L1ME3A	LINE/L1	(1)	6172	5616	297494
498	28.6	4.7	3.9	chr1	202237345	202237577	(46718845)	+	MamTip1	DNA/hAT-Tip100	21	255	(12)	297541
481	30.9	15.7	5.2	chr1	202678562	202680190	(46276232)	+	L2b	LINE/L2	1568	3379	(8)	298302
287	21.4	17.6	1.1	chr1	202837001	202837090	(46119332)	+	MIRc	SINE/MIR	130	237	(31)	298586
16	17.1	0.0	4.7	chr1	203078658	203078700	(45877722)	+	G-rich	Low_complexity	1	43	(0)	299019
28	0.0	0.0	0.0	chr1	203078753	203078779	(45877643)	+	(T)n	Simple_repeat	1	27	(0)	299020
46	12.3	0.0	0.0	chr1	203306796	203306875	(45649547)	+	(AC)n	Simple_repeat	1	80	(0)	299386
546	30.5	7.5	2.3	chr1	203316981	203317195	(45639227)	C	MER102a	DNA/hAT-Charlie	(27)	303	77	299401
933	13.6	5.2	3.0	chr1	203547925	203548093	(45408329)	+	AluJr	SINE/Alu	136	308	(4)	299807
15	20.3	4.4	0.0	chr1	203626534	203626582	(45329840)	+	(CACCCA)n	Simple_repeat	1	51	(0)	299984
365	31.8	11.6	2.2	chr1	203692492	203692671	(45263751)	C	L3b	LINE/CR1	(26)	5206	5008	300113
380	29.8	9.2	3.4	chr1	203990361	203990596	(44965826)	+	MLT1I	LTR/ERVL-MaLR	145	395	(16)	300731
17	7.2	3.3	0.0	chr1	204041145	204041174	(44915248)	+	(CAAA)n	Simple_repeat	1	31	(0)	300850
447	28.2	13.0	4.2	chr1	204102738	204102926	(44853496)	C	MIRb	SINE/MIR	(58)	210	3	300989
238	30.9	16.1	0.0	chr1	204103085	204103220	(44853202)	C	MIRb	SINE/MIR	(21)	247	86	300990
13	8.5	0.0	3.7	chr1	204152075	204152101	(44804321)	+	(CCCCG)n	Simple_repeat	1	27	(0)	301084
22	23.5	7.4	3.0	chr1	204152102	204152108	(44804314)	+	(CGGCCCG)n	Simple_repeat	136	146	(0)	301083
394	30.4	15.4	1.5	chr1	204258688	204258954	(44697468)	+	L3	LINE/CR1	3764	4074	(25)	301244
29	3.2	0.0	0.0	chr1	204412048	204412079	(44544343)	+	(G)n	Simple_repeat	1	32	(0)	301493
1213	15.0	2.2	0.0	chr1	204448473	204448652	(44507770)	+	AluJb	SINE/Alu	118	301	(11)	301554
35	0.0	0.0	0.0	chr1	204493525	204493554	(44462868)	+	(AC)n	Simple_repeat	1	30	(0)	301630
23	16.8	0.0	8.3	chr1	204494845	204494916	(44461506)	+	(CCTCC)n	Simple_repeat	1	72	(0)	301631
2168	12.6	3.9	0.8	chr1	204645610	204645978	(44310444)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	301974
6162	10.8	15.7	2.1	chr1	204751965	204752739	(44203683)	+	MER52C	LTR/ERV1	1	954	(324)	302189
796	14.9	0.0	4.1	chr1	205545014	205545160	(43411262)	C	SVA_F	Retroposon/SVA	(744)	631	491	303647
989	9.7	0.7	0.0	chr1	205545170	205545303	(43411119)	C	AluSx	SINE/Alu	(173)	139	5	303646
1956	13.8	0.0	6.1	chr1	205667087	205667223	(43289199)	+	AluJr	SINE/Alu	1	124	(188)	303877
485	23.8	12.7	1.3	chr1	206834910	206835062	(42121360)	+	MIR	SINE/MIR	90	262	(0)	305783
14	20.7	2.6	0.0	chr1	206909584	206909622	(42046800)	+	(ACCCCC)n	Simple_repeat	1	40	(0)	305899
516	26.2	1.6	2.4	chr1	207885013	207885137	(41071285)	+	MIR3	SINE/MIR	82	205	(3)	307280
244	28.7	0.0	0.0	chr1	208134537	208134623	(40821799)	+	MER127	DNA/TcMar-Tigger	1	87	(277)	307654
333	30.8	3.7	3.1	chr1	208203713	208203873	(40752549)	+	MIRc	SINE/MIR	88	249	(19)	307770
335	27.8	14.3	2.5	chr1	208302931	208303133	(40653289)	C	LTR16A1	LTR/ERVL	(222)	234	4	307931
1190	29.0	9.5	3.5	chr1	210174059	210174258	(38782164)	+	MLT1J1-int	LTR/ERVL-MaLR	804	1009	(378)	310730
1735	16.4	3.9	3.0	chr1	210174259	210174563	(38781859)	+	AluJr	SINE/Alu	1	308	(4)	310733
21	28.1	3.9	4.4	chr1	212432907	212433036	(36523386)	+	(GCCCTG)n	Simple_repeat	1	135	(0)	314490
16	17.1	4.9	2.3	chr1	212558963	212559003	(36397419)	+	(CG)n	Simple_repeat	1	43	(0)	314754
267	28.0	12.0	4.5	chr1	218711941	218712143	(30244279)	C	L2b	LINE/L2	(61)	3326	3101	323674
872	13.2	9.7	5.4	chr1	220090324	220090490	(28865932)	C	AluJr	SINE/Alu	(31)	281	107	325659
2132	11.3	0.7	1.1	chr1	220090527	220090800	(28865622)	C	AluSx	SINE/Alu	(38)	274	2	325660
12	19.3	0.0	5.1	chr1	220094064	220094102	(28862320)	+	(CCGCC)n	Simple_repeat	1	39	(0)	325675
15	14.4	0.0	0.0	chr1	220527854	220527877	(28428545)	+	(A)n	Simple_repeat	1	24	(0)	326369
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
306	30.5	14.3	2.0	chr1	220733353	220733553	(28222869)	C	MER102c	DNA/hAT-Charlie	(85)	246	17	326658
14	8.1	3.9	0.0	chr1	221742866	221742891	(27213531)	+	(CGCC)n	Simple_repeat	1	27	(0)	328101
19	21.3	3.0	4.3	chr1	222548109	222548175	(26408247)	+	(TCC)n	Simple_repeat	1	69	(0)	329315
1784	18.5	0.0	0.7	chr1	222825907	222826203	(26130219)	C	AluJo	SINE/Alu	(17)	295	1	329751
1638	17.3	11.5	0.3	chr1	223001526	223001849	(25954573)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	330032
215	29.9	11.2	1.6	chr1	223143482	223143610	(25812812)	C	MIR1_Amn	SINE/MIR	(78)	152	10	330276
539	20.5	1.9	12.0	chr1	223176317	223176549	(25779873)	C	MER112	DNA/hAT-Charlie	(1)	260	52	330329
253	30.9	8.6	7.8	chr1	223176625	223176731	(25779691)	+	MIRc	SINE/MIR	18	127	(141)	330330
1988	21.4	0.0	0.3	chr1	223176732	223177097	(25779325)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	330331
189	30.5	11.9	2.8	chr1	223727021	223727165	(25229257)	+	MamTip2	DNA/hAT-Tip100	67	226	(79)	331119
19	12.8	0.0	0.0	chr1	223755517	223755550	(25200872)	+	(GGA)n	Simple_repeat	1	34	(0)	331168
3102	15.6	2.7	4.0	chr1	224447040	224447593	(24508829)	C	MLT2B3	LTR/ERVL	(7)	547	1	332576
18	20.0	1.8	3.6	chr1	225428084	225428138	(23528284)	+	(CGCCT)n	Simple_repeat	1	56	(0)	333958
225	31.6	9.3	6.5	chr1	225463604	225463833	(23492589)	C	L2b	LINE/L2	(231)	3156	2920	334011
2623	21.3	1.2	0.6	chr1	225480741	225481255	(23475167)	+	LTR53	LTR/ERVL	1	518	(1)	334039
12	24.4	2.2	2.2	chr1	225565885	225565929	(23390493)	+	(GACA)n	Simple_repeat	1	46	(0)	334146
25	7.3	4.7	0.0	chr1	225889181	225889227	(23067195)	+	(GGAG)n	Simple_repeat	1	49	(0)	334744
1472	27.8	2.4	6.9	chr1	225891220	225891490	(23064932)	+	LTR32	LTR/ERVL	1	265	(192)	334749
2156	13.7	0.0	0.0	chr1	225891491	225891797	(23064625)	+	AluSx1	SINE/Alu	1	307	(5)	334750
226	28.1	0.6	3.3	chr1	225973421	225973489	(22982933)	+	L2b	LINE/L2	3318	3425	(1)	334930
12	23.0	6.9	1.6	chr1	226062414	226062471	(22893951)	+	G-rich	Low_complexity	1	62	(0)	335129
1512	13.9	9.3	0.0	chr1	226293588	226293831	(22662591)	C	AluSz6	SINE/Alu	(20)	292	24	335618
327	28.8	11.1	4.4	chr1	226400677	226401090	(22555332)	+	LTR16D	LTR/ERVL	170	675	(0)	335826
409	10.3	17.9	1.1	chr1	226401104	226401191	(22555231)	+	L1MC1	LINE/L1	5937	6042	(291)	335827
2505	17.4	2.4	0.7	chr1	226401192	226401643	(22554779)	C	MER66B	LTR/ERV1	(0)	486	27	335828
203	34.6	2.4	0.0	chr1	226406388	226406468	(22549954)	+	L2	LINE/L2	2867	2949	(470)	335834
12	23.3	0.0	0.0	chr1	226548643	226548677	(22407745)	+	G-rich	Low_complexity	1	35	(0)	336100
897	29.4	7.9	3.0	chr1	226708412	226708845	(22247577)	+	MLT1L	LTR/ERVL-MaLR	148	604	(6)	336320
287	33.3	0.8	1.7	chr1	226827575	226827693	(22128729)	+	MER5A	DNA/hAT-Charlie	9	126	(63)	336550
20	17.0	0.0	6.7	chr1	226870544	226870603	(22085819)	+	G-rich	Low_complexity	1	60	(0)	336618
320	25.9	7.4	3.5	chr1	226986204	226986319	(21970103)	+	MER102c	DNA/hAT-Charlie	207	327	(4)	336774
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
527	22.8	12.4	0.0	chr1	227736375	227736501	(21219921)	C	LTR42	LTR/ERVL	(6)	489	345	337831
4925	13.7	0.7	2.7	chr1	227753713	227754560	(21201862)	C	LTR1A2	LTR/ERV1	(0)	837	7	337854
275	11.1	0.0	0.0	chr1	227754575	227754619	(21201803)	C	L1MA9	LINE/L1	(587)	5602	5558	337851
2200	11.6	0.0	0.3	chr1	227910077	227910370	(21046052)	+	AluSg7	SINE/Alu	1	293	(16)	338040
1822	21.2	3.0	0.5	chr1	227951789	227952215	(21004207)	+	ERVL-B4-int	LTR/ERVL	1727	2164	(3550)	338093
238	30.2	2.3	1.6	chr1	228088508	228088635	(20867787)	+	MER20B	DNA/hAT-Charlie	264	392	(391)	338279
13	27.9	2.9	2.9	chr1	228102203	228102270	(20854152)	+	(CCCGC)n	Simple_repeat	1	70	(0)	338291
1740	33.2	6.3	8.6	chr1	228130971	228131440	(20824982)	+	ERV24_Prim-int	LTR/ERV1	4131	4624	(2951)	338319
13	16.1	0.0	0.0	chr1	228149679	228149706	(20806716)	+	(GGCAG)n	Simple_repeat	1	28	(0)	338356
34	0.0	0.0	0.0	chr1	228458656	228458684	(20497738)	+	(GT)n	Simple_repeat	1	29	(0)	338742
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
319	33.8	7.3	0.0	chr1	229075364	229075502	(19880920)	+	L3b	LINE/CR1	4972	5121	(111)	339646
2211	11.8	0.0	0.3	chr1	229118225	229118520	(19837902)	C	AluSq2	SINE/Alu	(18)	295	1	339721
13	17.8	0.0	2.9	chr1	229342542	229342575	(19613847)	+	(CCGCC)n	Simple_repeat	1	34	(0)	340087
1182	28.9	5.7	6.6	chr1	229843140	229843879	(19112543)	C	L1MEd	LINE/L1	(3994)	2248	1535	341001
321	29.8	13.2	4.3	chr1	229843936	229844142	(19112280)	+	MLT1J1	LTR/ERVL-MaLR	76	303	(141)	341005
236	33.3	2.9	2.9	chr1	229869940	229870044	(19086378)	+	MER5A	DNA/hAT-Charlie	6	110	(79)	341051
486	32.9	6.9	3.1	chr1	230086833	230087055	(18869367)	+	MIRb	SINE/MIR	21	252	(16)	341392
3429	19.7	7.4	1.9	chr1	230130950	230131688	(18824734)	+	LTR39	LTR/ERV1	1	783	(0)	341457
2106	14.7	1.9	0.3	chr1	230148580	230148886	(18807536)	C	AluJo	SINE/Alu	(0)	312	1	341474
1985	13.3	3.5	0.0	chr1	230148902	230149180	(18807242)	C	AluJb	SINE/Alu	(23)	289	1	341475
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
1038	19.4	0.5	1.0	chr1	230746780	230746972	(18209450)	+	MER58A	DNA/hAT-Charlie	31	222	(2)	342351
15	9.9	0.0	7.9	chr1	230754112	230754149	(18202273)	+	G-rich	Low_complexity	1	38	(0)	342359
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
24	6.8	0.0	0.0	chr1	231626638	231626668	(17329754)	+	(GT)n	Simple_repeat	1	31	(0)	343832
15	0.0	0.0	0.0	chr1	231626668	231626684	(17329738)	+	(GC)n	Simple_repeat	1	17	(0)	343833
22	7.9	2.3	4.4	chr1	232630076	232630119	(16326303)	+	(CTC)n	Simple_repeat	1	45	(0)	345178
17	9.3	2.8	2.7	chr1	232630156	232630191	(16326231)	+	(CCGC)n	Simple_repeat	1	37	(0)	345179
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
12	22.6	0.0	6.4	chr1	233327462	233327508	(15628914)	+	(GGCGG)n	Simple_repeat	1	47	(0)	346214
2223	21.0	4.7	11.0	chr1	233520604	233521196	(15435226)	+	MLT2B3	LTR/ERVL	1	554	(0)	346530
525	23.4	8.1	5.4	chr1	234723214	234723380	(14233042)	C	Eulor10	DNA?	(71)	249	78	348333
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
1885	13.0	1.7	0.7	chr1	235126148	235126431	(13829991)	C	AluSx	SINE/Alu	(25)	287	1	349082
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
3189	17.8	3.9	0.8	chr1	235919531	235920171	(13036251)	C	L1MB5	LINE/L1	(0)	6174	5513	350633
34	3.0	0.0	0.0	chr1	235921127	235921160	(13035262)	+	(AC)n	Simple_repeat	1	34	(0)	350636
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
13	21.9	2.3	2.2	chr1	236395330	236395373	(12561049)	+	(TCCCGGC)n	Simple_repeat	1	45	(0)	351538
15	23.2	1.3	7.8	chr1	236395861	236395936	(12560486)	+	(GCCCCT)n	Simple_repeat	1	77	(0)	351540
2103	11.5	0.0	2.0	chr1	236399193	236399487	(12556935)	C	AluSz	SINE/Alu	(23)	289	1	351546
1571	15.3	3.0	4.4	chr1	236400582	236400855	(12555567)	C	AluJo	SINE/Alu	(38)	274	5	351547
1934	11.9	4.7	0.7	chr1	236400914	236401199	(12555223)	+	AluSx	SINE/Alu	1	298	(14)	351548
441	31.1	10.0	5.6	chr1	236452128	236452319	(12504103)	C	LTR78B	LTR/ERV1	(903)	393	193	351659
619	20.2	3.5	13.8	chr1	236472324	236472518	(12483904)	+	MER5B	DNA/hAT-Charlie	5	178	(0)	351707
830	11.1	0.0	0.0	chr1	236472534	236472641	(12483781)	C	AluSx3	SINE/Alu	(17)	294	187	351708
27	13.2	3.3	1.6	chr1	236495510	236495569	(12460853)	+	(CCACCCT)n	Simple_repeat	1	62	(0)	351755
20	15.7	7.3	2.7	chr1	236686381	236686448	(12269974)	+	G-rich	Low_complexity	1	73	(0)	352104
14	20.3	0.0	4.7	chr1	240652854	240652896	(8303526)	+	(TTTC)n	Simple_repeat	1	43	(0)	358020
23	21.6	2.8	2.7	chr1	241156548	241156618	(7799804)	+	GA-rich	Low_complexity	1	73	(0)	358846
1077	28.1	7.0	0.6	chr1	241156655	241156991	(7799431)	+	LTR16A	LTR/ERVL	73	432	(19)	358847
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
5589	15.2	2.1	0.2	chr1	244439315	244440231	(4516191)	C	L1M1	LINE/L1	(6609)	956	22	364196
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
6779	10.2	2.4	2.8	chr10	3061469	3062440	(130734982)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	374573
16	17.6	6.6	3.1	chr10	3067478	3067538	(130729884)	+	(GGCGCG)n	Simple_repeat	1	65	(0)	374579
248	35.2	3.7	0.5	chr10	3124050	3124260	(130673162)	C	MER46C	DNA/TcMar-Tigger	(0)	338	121	374652
26	0.0	7.5	0.0	chr10	3486382	3486421	(130311001)	+	(AAAGA)n	Simple_repeat	1	43	(0)	375169
904	29.2	7.9	2.4	chr10	6006027	6006279	(127791143)	C	MLT1J	LTR/ERVL-MaLR	(70)	442	164	378735
5210	12.3	2.4	3.1	chr10	6006280	6007157	(127790265)	+	MER4D0	LTR/ERV1	1	872	(0)	378736
3055	6.9	3.5	12.9	chr10	6196326	6196827	(127600595)	C	MLT2A2	LTR/ERVL	(0)	453	1	379088
1980	13.1	0.3	3.5	chr10	6196828	6196941	(127600481)	C	AluJr	SINE/Alu	(198)	114	2	379087
12	12.0	3.7	0.0	chr10	6203364	6203390	(127594032)	+	(GCCGG)n	Simple_repeat	1	28	(0)	379103
331	28.5	4.6	12.2	chr10	6410552	6410700	(127386722)	+	MER20B	DNA/hAT-Charlie	43	180	(39)	379470
2511	7.6	0.0	0.0	chr10	6472027	6472330	(127325092)	+	AluY	SINE/Alu	1	304	(7)	379567
279	28.5	1.2	1.3	chr10	7377956	7378845	(126418577)	+	(TGTG)n	Simple_repeat	1	901	(0)	380922
18	20.3	1.4	6.9	chr10	8054413	8054483	(125742939)	+	(CCCG)n	Simple_repeat	1	72	(0)	382057
14	12.5	0.0	0.0	chr10	11165846	11165871	(122631551)	+	(CCCG)n	Simple_repeat	1	26	(0)	386567
16	11.7	5.4	0.0	chr10	12129500	12129536	(121667886)	+	G-rich	Low_complexity	1	39	(0)	388252
233	18.9	7.0	0.0	chr10	12449585	12449637	(121347785)	+	L1MA8	LINE/L1	6208	6264	(27)	388953
595	12.2	1.0	0.0	chr10	12449614	12449711	(121347711)	+	L1MA9	LINE/L1	6214	6312	(0)	388954
2031	12.7	2.4	0.0	chr10	12449723	12450005	(121347417)	+	AluSx1	SINE/Alu	1	290	(22)	388955
434	30.1	0.0	0.8	chr10	12455736	12455859	(121341563)	C	LTR82A	LTR/ERVL	(746)	126	4	388970
229	34.9	0.0	2.4	chr10	12455863	12455947	(121341475)	C	L3	LINE/CR1	(1188)	2911	2829	388967
19	12.9	0.0	10.9	chr10	13001795	13001858	(120795564)	+	(GGCGG)n	Simple_repeat	1	64	(0)	389942
14	14.7	0.0	3.1	chr10	13100170	13100201	(120697221)	+	(GCC)n	Simple_repeat	1	32	(0)	390109
1620	20.3	1.9	7.2	chr10	13146303	13146690	(120650732)	+	MLT1A	LTR/ERVL-MaLR	4	370	(4)	390181
5464	14.9	4.9	5.2	chr10	13146691	13146779	(120650643)	+	L1MC2	LINE/L1	3243	3319	(3529)	390179
386	31.7	0.8	0.0	chr10	14691478	14691600	(119105822)	C	MIRb	SINE/MIR	(26)	242	119	392896
2237	11.0	0.3	0.3	chr10	14691612	14691911	(119105511)	+	AluSx1	SINE/Alu	1	300	(12)	392897
237	20.6	2.7	8.8	chr10	15492423	15492502	(118304920)	+	MER5A	DNA/hAT-Charlie	114	188	(1)	394357
11	18.8	4.3	4.2	chr10	17228157	17228202	(116569220)	+	G-rich	Low_complexity	1	48	(0)	397004
18	8.8	2.5	4.9	chr10	17617404	17617443	(116179979)	+	(CCCCG)n	Simple_repeat	1	41	(0)	397753
4438	17.5	4.3	3.3	chr10	17805991	17806800	(115990622)	C	LTR1B1	LTR/ERV1	(0)	818	1	398062
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
20	26.9	3.2	3.1	chr10	21534817	21534910	(112262512)	+	(CCGCCG)n	Simple_repeat	1	97	(0)	403880
1393	29.8	7.9	5.1	chr10	21593956	21594268	(112203154)	C	L1MEg	LINE/L1	(5527)	715	409	404008
2164	11.4	0.7	1.3	chr10	21594269	21594576	(112202846)	+	AluSp	SINE/Alu	1	306	(7)	404017
17500	13.7	1.9	2.6	chr10	22508089	22514502	(111282920)	C	L1PA7	LINE/L1	(0)	6339	14	405385
605	25.1	14.2	0.5	chr10	22620535	22620734	(111176688)	+	MER102a	DNA/hAT-Charlie	34	265	(65)	405520
12	24.6	3.6	3.5	chr10	22713358	22713413	(111084009)	+	(CCGC)n	Simple_repeat	1	58	(0)	405676
23	20.4	0.0	4.5	chr10	22714638	22714708	(111082714)	+	G-rich	Low_complexity	1	67	(0)	405682
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
13	9.8	9.1	0.0	chr10	24416003	24416035	(109381387)	+	(GCAGGCT)n	Simple_repeat	1	36	(0)	408459
15	15.5	0.0	5.0	chr10	24552407	24552446	(109244976)	+	(AAGCC)n	Simple_repeat	1	40	(0)	408669
12	23.9	0.0	7.1	chr10	24722820	24722875	(109074547)	+	G-rich	Low_complexity	1	56	(0)	408953
2067	15.7	9.0	4.6	chr10	27020167	27020662	(106776760)	C	L1MA5	LINE/L1	(5)	6295	5776	412708
13	23.3	3.0	5.8	chr10	27155282	27155348	(106642074)	+	G-rich	Low_complexity	1	69	(0)	412953
13	25.0	0.0	0.0	chr10	28303080	28303117	(105494305)	+	(GGCGG)n	Simple_repeat	1	38	(0)	414798
1038	23.0	13.6	5.4	chr10	30043908	30044224	(103753198)	+	MLT1A0	LTR/ERVL-MaLR	2	348	(17)	417950
19	16.9	2.0	2.0	chr10	31032472	31032520	(102764902)	+	(GCTCCCG)n	Simple_repeat	1	50	(0)	419723
23	9.7	0.0	0.0	chr10	32055519	32055551	(101741871)	+	(CA)n	Simple_repeat	1	33	(0)	421234
594	29.4	10.1	5.1	chr10	32943700	32944208	(100853214)	C	LTR16E1	LTR/ERVL	(1)	537	1	422507
1931	13.9	0.3	0.7	chr10	33048153	33048456	(100748966)	C	LTR1	LTR/ERV1	(480)	303	1	422686
1103	10.1	1.9	0.0	chr10	33048457	33048614	(100748808)	C	L1PB3	LINE/L1	(201)	5953	5793	422687
532	24.3	3.2	5.6	chr10	34628411	34628571	(99168851)	C	MER58A	DNA/hAT-Charlie	(1)	223	67	424999
959	28.7	6.6	4.5	chr10	35300101	35300563	(98496859)	C	L1ME1	LINE/L1	(5905)	495	23	426366
23	21.6	2.7	2.7	chr10	35336428	35336500	(98460922)	+	G-rich	Low_complexity	1	75	(0)	426454
15	19.2	8.2	1.5	chr10	35336519	35336579	(98460843)	+	(GCCGC)n	Simple_repeat	1	66	(0)	426455
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
1424	21.1	12.5	2.6	chr10	42826948	42827365	(90970057)	+	MSTA1	LTR/ERVL-MaLR	1	465	(0)	432607
3212	22.7	17.4	1.8	chr10	42827366	42827866	(90969556)	C	L1ME3G	LINE/L1	(6550)	618	1	432604
449	14.3	0.0	1.3	chr10	42827990	42828067	(90969355)	C	L1ME3A	LINE/L1	(1)	6172	6096	432608
501	28.7	12.7	1.8	chr10	42828100	42828379	(90969043)	C	L1ME3A	LINE/L1	(143)	6030	5716	432609
646	24.1	15.0	4.8	chr10	42926763	42927106	(90870316)	+	LTR16A1	LTR/ERVL	1	409	(47)	432765
15	11.1	7.4	5.2	chr10	43226092	43226145	(90571277)	+	(GGCCAGG)n	Simple_repeat	1	58	(0)	433103
15	16.4	2.2	4.3	chr10	43229415	43229459	(90567963)	+	G-rich	Low_complexity	1	46	(0)	433109
244	18.8	5.9	1.5	chr10	43250488	43250552	(90546870)	+	MER5A	DNA/hAT-Charlie	57	124	(65)	433129
31	0.0	0.0	2.9	chr10	43396888	43396921	(90400501)	+	(GGGAG)n	Simple_repeat	1	34	(0)	433409
1433	11.3	4.4	3.2	chr10	43407937	43408183	(90389239)	C	AluJb	SINE/Alu	(23)	289	40	433436
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
3035	17.9	1.6	8.8	chr10	46523894	46524639	(87272783)	C	LTR8	LTR/ERV1	(0)	691	1	437799
236	28.4	9.2	2.7	chr10	46552376	46552487	(87244935)	+	L4_B_Mam	LINE/RTE-X	2440	2559	(2382)	437846
11	23.9	4.5	0.0	chr10	48463871	48463914	(85333508)	+	(TCACAGC)n	Simple_repeat	1	46	(0)	440571
19	13.2	1.7	8.3	chr10	49327123	49327181	(84470241)	+	(CTCC)n	Simple_repeat	1	60	(0)	441748
613	28.0	2.3	0.9	chr10	49668251	49668463	(84128959)	+	MIRc	SINE/MIR	4	219	(49)	442153
16	8.2	0.0	0.0	chr10	58334920	58334945	(75462477)	+	(GGCGG)n	Simple_repeat	1	26	(0)	453993
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
2466	13.6	1.5	1.5	chr10	62924334	62924804	(70872618)	C	MER52C	LTR/ERV1	(788)	490	20	460833
15	25.2	4.8	1.5	chr10	63133249	63133311	(70664111)	+	(GGC)n	Simple_repeat	1	66	(0)	461239
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
12	16.4	2.8	2.7	chr10	63630510	63630545	(70166877)	+	(CGCCCC)n	Simple_repeat	1	37	(0)	462128
246	28.3	2.8	5.4	chr10	69452071	69452182	(64345240)	+	MIRc	SINE/MIR	32	140	(128)	471632
538	29.6	6.1	2.9	chr10	69962180	69962353	(63835069)	+	MIR3	SINE/MIR	14	193	(15)	472534
33	5.2	0.0	0.0	chr10	70132752	70132791	(63664631)	+	(CGCTCC)n	Simple_repeat	1	40	(0)	472807
18	17.2	0.0	2.4	chr10	70404143	70404204	(63393218)	+	(GCT)n	Simple_repeat	1	60	(0)	473402
14	21.3	1.8	5.4	chr10	70404189	70404243	(63393179)	+	(CTGAGG)n	Simple_repeat	1	56	(0)	473403
22	15.4	0.0	0.0	chr10	70404220	70404300	(63393122)	+	(GCGGCG)n	Simple_repeat	1	81	(0)	473404
499	30.7	3.0	2.5	chr10	70473189	70473385	(63324037)	+	L2c	LINE/L2	3175	3372	(15)	473548
925	23.8	3.6	0.9	chr10	70536533	70536748	(63260674)	+	MER58A	DNA/hAT-Charlie	3	224	(0)	473678
3229	19.9	3.4	2.5	chr10	70575722	70576429	(63220993)	C	MER72	LTR/ERV1	(0)	722	9	473743
5352	13.8	19.6	1.4	chr10	70622502	70623541	(63173881)	+	MER52C	LTR/ERV1	1	1276	(2)	473835
13	18.8	0.0	5.0	chr10	70778809	70778848	(63018574)	+	G-rich	Low_complexity	1	40	(0)	474106
3045	25.8	12.9	3.8	chr10	70898200	70898771	(62898651)	C	Arthur1B	DNA/hAT-Tip100	(573)	652	1	474285
2232	10.8	0.3	1.0	chr10	71242952	71243257	(62554165)	+	AluSx	SINE/Alu	2	305	(7)	474857
213	33.0	0.0	7.4	chr10	71244059	71244153	(62553269)	C	L2c	LINE/L2	(1)	3386	3299	474861
260	28.6	0.0	1.4	chr10	71246891	71246961	(62550461)	C	MamRTE1	LINE/RTE-BovB	(3562)	250	181	474866
264	32.7	8.2	4.2	chr10	71698468	71698766	(62098656)	+	L2a	LINE/L2	2912	3207	(219)	475757
474	26.8	13.6	0.7	chr10	71729259	71729547	(62067875)	C	LTR16A2	LTR/ERVL	(0)	495	164	475802
12	12.5	0.0	3.6	chr10	71729567	71729594	(62067828)	+	G-rich	Low_complexity	1	28	(0)	475803
229	35.3	3.3	4.1	chr10	71773830	71773950	(62023472)	+	L2c	LINE/L2	3268	3387	(0)	475880
44	0.0	0.0	0.0	chr10	71774052	71774089	(62023333)	+	(CA)n	Simple_repeat	1	38	(0)	475881
778	16.3	2.3	3.3	chr10	72025943	72026125	(61771297)	C	MER5A	DNA/hAT-Charlie	(6)	160	3	476377
220	24.1	6.5	3.3	chr10	72026141	72026230	(61771192)	C	MER5B	DNA/hAT-Charlie	(74)	104	12	476378
267	25.8	3.2	12.4	chr10	72081935	72082071	(61715351)	C	L2b	LINE/L2	(14)	3361	3238	476492
1466	22.8	6.7	5.0	chr10	72082410	72082576	(61714846)	+	MLT1A	LTR/ERVL-MaLR	2	162	(212)	476493
2245	13.1	0.0	0.0	chr10	72082577	72082882	(61714540)	+	AluJb	SINE/Alu	6	311	(1)	476494
2186	12.5	0.0	0.3	chr10	72122140	72122436	(61674986)	+	AluSg	SINE/Alu	2	297	(13)	476562
4339	13.6	1.3	8.1	chr10	72122437	72122500	(61674922)	+	L1MCa	LINE/L1	3054	3069	(3252)	476558
1666	16.6	3.4	3.7	chr10	72122501	72122795	(61674627)	+	AluJr	SINE/Alu	2	295	(17)	476563
15	16.1	3.5	0.0	chr10	72260769	72260804	(61536618)	+	(CT)n	Simple_repeat	1	37	(0)	476890
19	15.1	0.0	0.0	chr10	72297844	72297880	(61499542)	+	(TCCGCC)n	Simple_repeat	1	37	(0)	476990
223	31.1	0.0	1.3	chr10	72355122	72355196	(61442226)	C	MIR3	SINE/MIR	(33)	175	102	477094
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
35	0.0	0.0	0.0	chr10	73168309	73168340	(60629082)	+	(GAG)n	Simple_repeat	1	32	(0)	478774
16	19.1	4.0	1.9	chr10	73246748	73246797	(60550625)	+	(GTTCTCT)n	Simple_repeat	1	52	(0)	478920
19	18.9	2.4	0.0	chr10	73991945	73991991	(59805431)	+	G-rich	Low_complexity	1	48	(0)	480343
7578	17.9	12.8	2.6	chr10	74206836	74208406	(59589016)	C	MER52A	LTR/ERV1	(0)	1755	1	480783
64	1.6	0.0	0.0	chr10	75123151	75123212	(58674210)	+	(CCCAC)n	Simple_repeat	1	62	(0)	482465
2617	24.6	6.3	3.9	chr10	75123262	75123685	(58673737)	C	L1MDa	LINE/L1	(5903)	730	311	482464
468	12.7	0.0	1.4	chr10	75193873	75193943	(58603479)	C	AluSz6	SINE/Alu	(14)	298	229	482630
842	7.1	0.0	0.0	chr10	75193944	75194042	(58603380)	C	AluSx	SINE/Alu	(213)	99	1	482631
2270	10.0	0.7	0.3	chr10	75194060	75194360	(58603062)	C	AluSq	SINE/Alu	(11)	302	1	482632
626	27.4	4.0	1.8	chr10	75449191	75449409	(58348013)	C	MIR	SINE/MIR	(6)	256	33	483128
17	12.2	2.6	2.6	chr10	75509023	75509060	(58288362)	+	(TTTCTT)n	Simple_repeat	1	39	(0)	483210
17	16.1	0.0	0.0	chr10	75509265	75509293	(58288129)	+	(TG)n	Simple_repeat	1	29	(0)	483211
354	21.3	2.1	2.1	chr10	77350971	77351066	(56446356)	+	Charlie15a	DNA/hAT-Charlie	127	222	(2)	485763
108	14.1	2.1	4.5	chr10	77392093	77392334	(56405088)	+	G-rich	Low_complexity	1	247	(0)	485828
11	20.7	5.1	0.0	chr10	77711446	77711484	(56085938)	+	(CTCCCCT)n	Simple_repeat	1	41	(0)	486456
16	21.1	0.0	0.0	chr10	78303349	78303387	(55494035)	+	(CCTCC)n	Simple_repeat	1	39	(0)	487571
13	19.0	0.0	5.0	chr10	78303451	78303490	(55493932)	+	(CCGC)n	Simple_repeat	1	40	(0)	487572
197	29.1	1.8	0.0	chr10	78932075	78932129	(54865293)	C	L3	LINE/CR1	(3)	4096	4041	488724
18	12.1	2.8	0.0	chr10	79048228	79048263	(54749159)	+	(CACCCA)n	Simple_repeat	1	37	(0)	488955
1540	16.6	9.9	1.8	chr10	79078571	79078848	(54718574)	C	AluJb	SINE/Alu	(9)	303	1	489018
1702	19.5	3.7	0.3	chr10	79145721	79146007	(54651415)	C	AluJb	SINE/Alu	(15)	297	1	489143
55	0.0	0.0	0.0	chr10	79175584	79175630	(54621792)	+	(GT)n	Simple_repeat	1	47	(0)	489193
193	29.1	12.0	3.7	chr10	79241878	79241984	(54555438)	C	Tigger19a	DNA/TcMar-Tigger	(30)	293	177	489318
181	33.8	7.2	0.0	chr10	79266342	79266418	(54531004)	+	MIR1_Amn	SINE/MIR	75	157	(73)	489353
2067	14.4	1.3	1.3	chr10	79273346	79273657	(54523765)	C	AluSz	SINE/Alu	(0)	312	1	489366
17	8.0	0.0	0.0	chr10	79293125	79293151	(54504271)	+	(CCACC)n	Simple_repeat	1	27	(0)	489393
16	10.7	7.1	2.2	chr10	79310878	79310919	(54486503)	+	(CTCCT)n	Simple_repeat	1	45	(0)	489409
14	15.9	0.0	0.0	chr10	79311030	79311057	(54486365)	+	(CTC)n	Simple_repeat	1	28	(0)	489410
511	34.3	15.4	5.0	chr10	79391647	79393512	(54403910)	+	L2b	LINE/L2	569	2664	(755)	489533
241	35.3	4.4	3.5	chr10	79399515	79399644	(54397778)	C	MIR3	SINE/MIR	(61)	169	33	489543
16	15.3	6.8	0.0	chr10	79445685	79445728	(54351694)	+	(GCCCC)n	Simple_repeat	1	47	(0)	489640
310	30.9	1.4	2.1	chr10	79446835	79446976	(54350446)	+	MIR	SINE/MIR	29	175	(93)	489642
13	18.9	0.0	0.0	chr10	80079182	80079211	(53718211)	+	G-rich	Low_complexity	1	30	(0)	490603
348	28.9	8.0	0.0	chr10	80164374	80164477	(53632945)	C	MIRb	SINE/MIR	(114)	154	42	490774
424	33.2	5.2	3.5	chr10	80429317	80429544	(53367878)	C	MIRb	SINE/MIR	(32)	236	5	491207
67	17.8	0.0	3.4	chr10	80429545	80429693	(53367729)	+	(GCCCT)n	Simple_repeat	1	149	(0)	491208
28	29.6	2.6	0.9	chr10	80454073	80454185	(53343237)	+	G-rich	Low_complexity	1	116	(0)	491253
288	24.6	2.8	10.4	chr10	80459001	80459077	(53338345)	+	MIRc	SINE/MIR	116	192	(76)	491261
19	16.2	0.0	2.3	chr10	80459207	80459249	(53338173)	+	G-rich	Low_complexity	1	43	(0)	491262
24	13.6	0.0	0.0	chr10	80462345	80462386	(53335036)	+	(GGGAT)n	Simple_repeat	1	42	(0)	491265
2226	16.1	13.2	1.5	chr10	80505829	80505994	(53291428)	C	LTR24B	LTR/ERV1	(6)	570	389	491327
2014	12.5	11.8	0.9	chr10	80697226	80697564	(53099858)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	491638
1804	19.2	4.1	2.2	chr10	85863096	85863451	(47933971)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	3	498646
287	22.6	0.0	1.6	chr10	86254524	86254586	(47542836)	+	MER5B	DNA/hAT-Charlie	17	78	(100)	499200
534	19.6	21.5	1.2	chr10	86265379	86265548	(47531874)	C	MIRb	SINE/MIR	(34)	234	21	499220
253	30.6	16.9	1.9	chr10	86585358	86585517	(47211905)	+	L2c	LINE/L2	3150	3338	(49)	499797
254	28.1	10.1	1.1	chr10	86770496	86770585	(47026837)	+	LTR78B	LTR/ERV1	770	868	(428)	500114
494	28.5	15.5	2.9	chr10	86770628	86770869	(47026553)	+	LTR78B	LTR/ERV1	997	1274	(22)	500114
21	33.0	1.4	0.0	chr10	86960651	86960723	(46836699)	+	(TG)n	Simple_repeat	1	74	(0)	500476
13	14.2	8.0	3.7	chr10	86971342	86971391	(46826031)	+	G-rich	Low_complexity	1	54	(0)	500489
16970	15.0	3.1	1.0	chr10	87035499	87039386	(46758036)	C	L1PA13	LINE/L1	(2765)	4001	14	500600
48	22.5	0.0	0.0	chr10	87095085	87095192	(46702230)	+	G-rich	Low_complexity	1	108	(0)	500704
13	17.6	2.4	4.7	chr10	87659773	87659814	(46137608)	+	GA-rich	Low_complexity	1	43	(0)	501619
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
6890	16.3	2.7	2.3	chr10	89788707	89790543	(44006879)	C	L1PBa1	LINE/L1	(4776)	2087	258	504970
22	25.9	6.1	2.5	chr10	91220482	91220596	(42576826)	+	(GGC)n	Simple_repeat	1	122	(0)	506997
258	31.0	1.0	2.0	chr10	92387543	92387644	(41409778)	C	MER5B	DNA/hAT-Charlie	(0)	178	78	509002
12	13.7	0.0	0.0	chr10	93993810	93993833	(39803589)	+	(CCGC)n	Simple_repeat	1	24	(0)	512166
15	19.8	0.0	4.5	chr10	93994009	93994052	(39803370)	+	(GCG)n	Simple_repeat	1	44	(0)	512167
2422	15.5	5.9	0.2	chr10	94353244	94353645	(39443777)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	512827
13	8.5	4.0	0.0	chr10	95559771	95559795	(38237627)	+	(TCC)n	Simple_repeat	1	26	(0)	514498
14	24.7	0.0	0.0	chr10	95561502	95561540	(38235882)	+	G-rich	Low_complexity	1	39	(0)	514501
680	27.7	11.5	9.4	chr10	97621513	97621597	(36175825)	+	MLT1H	LTR/ERVL-MaLR	13	103	(446)	518358
1969	10.5	5.5	0.4	chr10	97621598	97621874	(36175548)	+	AluSx1	SINE/Alu	1	292	(20)	518359
444	25.1	1.2	12.8	chr10	97789345	97789425	(36007997)	+	MIR3	SINE/MIR	15	78	(130)	518740
53	0.0	0.0	0.0	chr10	97840249	97840293	(35957129)	+	(AG)n	Simple_repeat	1	45	(0)	518854
18	12.6	0.0	2.7	chr10	97889126	97889162	(35908260)	+	G-rich	Low_complexity	1	37	(0)	518962
19	13.2	0.0	2.9	chr10	98404664	98404698	(35392724)	+	(GT)n	Simple_repeat	1	35	(0)	519863
369	24.6	13.6	0.9	chr10	98447044	98447158	(35350264)	C	MIR3	SINE/MIR	(62)	146	15	519934
1061	13.4	2.3	0.0	chr10	98471230	98471401	(35326021)	C	MER5B	DNA/hAT-Charlie	(0)	178	3	519975
21412	9.9	1.4	1.1	chr10	99132446	99138883	(34658539)	+	L1PA7	LINE/L1	5	6448	(21)	520981
10458	15.3	2.6	2.7	chr10	99265617	99267502	(34529920)	+	L1PB1	LINE/L1	258	2145	(4718)	521157
610	29.3	4.9	7.7	chr10	99926422	99926944	(33870478)	+	L1MEb	LINE/L1	88	531	(5539)	522342
23	16.8	0.0	0.0	chr10	100662200	100662239	(33135183)	+	(TG)n	Simple_repeat	1	40	(0)	523748
12	26.1	0.0	4.3	chr10	100807777	100807822	(32989600)	+	(TGCA)n	Simple_repeat	1	46	(0)	523992
463	28.3	3.5	0.0	chr10	101090767	101090904	(32706518)	+	MIRb	SINE/MIR	111	253	(15)	524454
13	21.1	4.5	5.7	chr10	101230283	101230349	(32567073)	+	(CCGGCT)n	Simple_repeat	1	70	(0)	524696
18	15.3	0.0	2.6	chr10	101570224	101570262	(32227160)	+	(TCCAC)n	Simple_repeat	1	39	(0)	525306
13	10.6	0.0	8.3	chr10	101570298	101570333	(32227089)	+	(CCCCA)n	Simple_repeat	1	36	(0)	525307
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
12	15.3	5.3	2.5	chr10	101695111	101695148	(32102274)	+	(GCCCGA)n	Simple_repeat	1	40	(0)	525478
34	0.0	0.0	0.0	chr10	101830682	101830710	(31966712)	+	(CA)n	Simple_repeat	1	29	(0)	525757
343	26.5	11.1	2.2	chr10	102064962	102065085	(31732337)	+	L2a	LINE/L2	3287	3426	(0)	526214
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
17	14.1	5.5	7.8	chr10	102408735	102408807	(31388615)	+	(TGCCC)n	Simple_repeat	1	77	(0)	526865
502	28.3	6.2	0.0	chr10	102465440	102465605	(31331817)	C	MIRb	SINE/MIR	(8)	260	84	526980
1502	10.5	3.9	0.5	chr10	102467957	102468177	(31329245)	C	LTR1A2	LTR/ERV1	(602)	235	7	526987
267	34.9	6.7	4.5	chr10	102468207	102468338	(31329084)	C	MIRb	SINE/MIR	(51)	217	83	526988
12	15.3	3.5	0.0	chr10	102642298	102642326	(31155096)	+	(CGCCC)n	Simple_repeat	1	30	(0)	527306
208	36.6	7.3	0.0	chr10	103548772	103548872	(30248550)	C	MIRb	SINE/MIR	(59)	209	101	529185
16	19.6	6.7	1.6	chr10	103555148	103555228	(30242194)	+	(GTGCTGC)n	Simple_repeat	1	85	(0)	529199
185	24.4	11.4	0.0	chr10	103653997	103654074	(30143348)	+	L2c	LINE/L2	3069	3156	(231)	529365
539	29.9	4.2	2.9	chr10	103697087	103697324	(30100098)	+	MIR	SINE/MIR	22	262	(0)	529454
1639	15.8	10.1	2.1	chr10	103718842	103719176	(30078246)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	529498
489	32.4	4.5	0.6	chr10	103719316	103719486	(30077936)	+	MIR	SINE/MIR	14	191	(71)	529499
13	10.4	2.9	5.6	chr10	103855524	103855558	(29941864)	+	(CGCT)n	Simple_repeat	1	36	(0)	529776
12	26.3	0.0	5.5	chr10	103855577	103855631	(29941791)	+	(GGCGG)n	Simple_repeat	1	55	(0)	529777
763	17.4	0.0	1.5	chr10	104232495	104232628	(29564794)	+	MER5A1	DNA/hAT-Charlie	1	132	(34)	530387
15	9.8	0.0	0.0	chr10	110008850	110008871	(23788551)	+	(AC)n	Simple_repeat	1	22	(0)	538776
1961	16.1	0.0	0.0	chr10	110430254	110430557	(23366865)	C	AluSz	SINE/Alu	(8)	304	1	539493
535	26.2	3.2	1.3	chr10	110430612	110430762	(23366660)	C	MER5A	DNA/hAT-Charlie	(22)	167	14	539494
279	29.3	15.6	3.6	chr10	110496172	110496447	(23300975)	+	L2b	LINE/L2	3048	3362	(13)	539643
12	22.6	2.3	2.3	chr10	110497915	110497957	(23299465)	+	G-rich	Low_complexity	1	44	(0)	539647
14	4.9	0.0	0.0	chr10	110845940	110845960	(22951462)	+	(GCCT)n	Simple_repeat	1	21	(0)	540258
473	31.1	9.3	1.3	chr10	113752474	113752711	(20044711)	C	MIR	SINE/MIR	(2)	260	2	544830
282	15.8	14.6	7.3	chr10	113752712	113752754	(20044668)	C	MIR3	SINE/MIR	(37)	171	119	544829
2614	4.8	0.0	1.0	chr10	116609997	116610308	(17187114)	C	AluY	SINE/Alu	(2)	309	1	549063
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
1848	21.9	11.1	6.0	chr10	118674127	118674656	(15122766)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	552416
991	16.9	2.7	2.7	chr10	118735375	118735562	(15061860)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	552508
203	16.7	0.0	0.0	chr10	118908561	118908590	(14888832)	+	MER91C	DNA/hAT-Tip100	35	64	(76)	552821
12	23.3	7.3	0.0	chr10	119004097	119004151	(14793271)	+	(CAGGCTG)n	Simple_repeat	1	59	(0)	552995
582	25.8	5.4	4.4	chr10	119004196	119004398	(14793024)	+	MIRb	SINE/MIR	26	230	(38)	552996
15	20.1	6.2	2.0	chr10	119029518	119029565	(14767857)	+	(GC)n	Simple_repeat	1	51	(0)	553069
2127	11.1	1.1	0.0	chr10	119091870	119092148	(14705274)	C	AluSc8	SINE/Alu	(29)	282	1	553185
7039	5.8	1.8	1.1	chr10	119260410	119261944	(14535478)	C	SVA_D	Retroposon/SVA	(5)	1381	1	553574
325	34.9	9.8	1.3	chr10	119310726	119310949	(14486473)	C	MIRb	SINE/MIR	(3)	265	21	553667
207	25.9	1.7	0.0	chr10	119311049	119311106	(14486316)	C	MIRb	SINE/MIR	(93)	175	117	553668
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
276	35.8	1.6	4.6	chr10	121414954	121415149	(12382273)	C	MER113A	DNA/hAT-Charlie	(124)	190	1	557125
29	25.2	0.9	5.4	chr10	121598376	121598485	(12198937)	+	(GCC)n	Simple_repeat	1	111	(0)	557380
1662	15.7	12.3	0.3	chr10	122487601	122487906	(11309516)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	558956
11	20.3	0.0	9.3	chr10	123135975	123136028	(10661394)	+	(CCGCCCG)n	Simple_repeat	1	54	(0)	559849
279	19.1	16.7	4.5	chr10	123573481	123573590	(10223832)	C	MER5A1	DNA/hAT-Charlie	(40)	126	1	560537
449	21.0	18.2	1.7	chr10	124323129	124323301	(9474121)	C	MLT1J2	LTR/ERVL-MaLR	(3)	441	244	561702
469	27.1	18.0	4.8	chr10	124420125	124420488	(9376934)	C	LTR33	LTR/ERVL	(74)	441	1	561876
296	30.8	4.8	6.5	chr10	124665893	124666062	(9131360)	+	L2b	LINE/L2	3199	3365	(10)	562282
488	25.9	14.9	2.1	chr10	124671107	124671531	(9125891)	+	LTR50	LTR/ERVL	216	795	(0)	562286
861	26.1	12.0	2.4	chr10	124898869	124899115	(8898307)	C	MER45C	DNA/hAT-Tip100	(0)	953	680	562723
18	7.5	0.0	0.0	chr10	125145491	125145518	(8651904)	+	(GGGCA)n	Simple_repeat	1	28	(0)	563033
16	15.3	0.0	5.0	chr10	125161208	125161247	(8636175)	+	(GCGG)n	Simple_repeat	1	40	(0)	563054
753	24.6	13.3	2.1	chr10	125662588	125662874	(8134548)	C	LTR16A	LTR/ERVL	(102)	349	26	563846
1571	19.8	4.2	24.5	chr10	126337029	126337731	(7459691)	C	MLT2B3	LTR/ERVL	(0)	554	1	564726
54	0.0	0.0	0.0	chr10	126925725	126925770	(6871652)	+	(TG)n	Simple_repeat	1	46	(0)	565549
12	30.6	0.0	4.6	chr10	126925853	126925917	(6871505)	+	G-rich	Low_complexity	1	65	(0)	565550
530	33.1	2.2	0.6	chr10	126925992	126926173	(6871249)	+	MIRb	SINE/MIR	80	264	(4)	565551
1268	17.4	17.9	0.0	chr10	129385734	129385980	(4411442)	+	AluJb	SINE/Alu	1	301	(11)	568459
22	19.1	0.0	3.7	chr10	129386000	129386053	(4411369)	+	G-rich	Low_complexity	1	54	(0)	568460
483	31.3	8.5	3.1	chr10	129386057	129386313	(4411109)	+	L1MC4	LINE/L1	957	1228	(4987)	568461
3286	9.6	1.6	0.0	chr10	129435583	129436021	(4361401)	C	MLT2A2	LTR/ERVL	(7)	446	1	568505
193	38.0	4.2	1.1	chr10	129440515	129440607	(4356815)	+	L2b	LINE/L2	3250	3345	(30)	568511
2808	18.4	1.9	2.4	chr10	129929818	129930356	(3867066)	+	Ricksha_c	DNA/MULE-MuDR	348	883	(1165)	568898
23638	8.5	0.7	2.4	chr10	130090117	130093730	(3703692)	+	L1PA7	LINE/L1	5	3618	(2843)	569088
18	24.5	0.0	4.8	chr10	130136409	130136471	(3660951)	+	(GGC)n	Simple_repeat	1	63	(0)	569159
19	18.0	5.2	1.6	chr10	130136516	130136573	(3660849)	+	G-rich	Low_complexity	1	61	(0)	569160
787	23.6	2.7	5.7	chr10	131909457	131909685	(1887737)	C	MER58A	DNA/hAT-Charlie	(2)	222	1	571077
1207	24.0	6.6	1.3	chr10	131909696	131910084	(1887338)	C	Charlie1a	DNA/hAT-Charlie	(4)	1451	1041	571078
108	25.6	2.8	4.1	chr10	132149517	132149945	(1647477)	+	(CCCTC)n	Simple_repeat	1	441	(0)	571381
15	14.7	0.0	0.0	chr10	132164886	132164915	(1632507)	+	(GCTGA)n	Simple_repeat	1	30	(0)	571390
316	31.0	4.4	0.0	chr10	132164916	132165044	(1632378)	+	MIRc	SINE/MIR	5	139	(129)	571391
199	25.0	1.3	5.0	chr10	132208535	132208614	(1588808)	+	L2b	LINE/L2	3120	3196	(179)	571415
873	24.3	6.7	4.5	chr10	132323724	132324130	(1473292)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	571531
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
13	23.5	0.0	0.0	chr10	132364785	132364819	(1432603)	+	(CCCA)n	Simple_repeat	1	35	(0)	571578
101	23.0	6.5	5.3	chr10	132364820	132364843	(1432579)	+	(CACTCA)n	Simple_repeat	558	586	(0)	571577
15	20.7	2.2	2.1	chr10	132419094	132419139	(1378283)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	571624
12	13.9	0.0	0.0	chr10	132451801	132451824	(1345598)	+	(TGAG)n	Simple_repeat	1	24	(0)	571649
249	35.3	1.3	7.1	chr10	132452997	132453164	(1344258)	+	MIRb	SINE/MIR	76	233	(35)	571650
12	13.7	6.2	0.0	chr10	132453220	132453251	(1344171)	+	G-rich	Low_complexity	1	34	(0)	571651
15	23.9	1.9	1.9	chr10	132458712	132458763	(1338659)	+	(CCCGCGC)n	Simple_repeat	1	53	(0)	571654
240	27.1	6.6	2.5	chr10	132465894	132466001	(1331421)	C	MIR1_Amn	SINE/MIR	(37)	231	121	571660
405	33.5	4.9	8.7	chr10	132634427	132634997	(1162425)	C	L1MC4	LINE/L1	(3418)	2796	2233	571858
5146	12.2	4.7	2.4	chr10	132967129	132967946	(829476)	C	LTR1A2	LTR/ERV1	(0)	837	1	572090
685	24.9	2.1	13.2	chr10	132967947	132968108	(829314)	C	L1MEf	LINE/L1	(2906)	3240	3077	572087
12	25.1	0.0	8.1	chr10	133101193	133101254	(696168)	+	(CCGC)n	Simple_repeat	1	62	(0)	572167
25	24.2	2.5	1.2	chr10	133159932	133160012	(637410)	+	(CCCCG)n	Simple_repeat	1	82	(0)	572211
12	18.4	5.4	0.0	chr10	133210572	133210608	(586814)	+	(CCACC)n	Simple_repeat	1	39	(0)	572265
25	22.6	0.0	5.0	chr11	289035	289114	(134797508)	+	(CCCGCC)n	Simple_repeat	1	80	(0)	573213
21	0.0	0.0	0.0	chr11	297578	297600	(134789022)	+	(GT)n	Simple_repeat	1	23	(0)	573216
618	21.2	2.8	0.7	chr11	334344	334481	(134752141)	C	MER21C	LTR/ERVL	(522)	416	276	573268
619	26.3	9.1	2.4	chr11	444688	445053	(134641569)	+	L1ME4c	LINE/L1	298	645	(185)	573396
19	28.2	4.4	1.1	chr11	705981	706071	(134380551)	+	G-rich	Low_complexity	1	95	(0)	573793
13	15.9	0.0	0.0	chr11	720751	720778	(134365844)	+	(GGCGG)n	Simple_repeat	1	28	(0)	573829
2735	1.7	0.0	0.3	chr11	744560	744861	(134341761)	+	AluYe5	SINE/Alu	1	301	(9)	573878
1142	10.5	0.0	0.0	chr11	744872	745014	(134341608)	+	AluSc5	SINE/Alu	1	143	(166)	573879
2224	9.7	1.0	0.3	chr11	745016	745314	(134341308)	+	AluSq2	SINE/Alu	1	301	(12)	573880
12	16.0	0.0	3.3	chr11	833440	833469	(134253153)	+	(GGC)n	Simple_repeat	1	30	(0)	574003
12	22.4	0.0	2.6	chr11	1350199	1350236	(133736386)	+	(CTCCCC)n	Simple_repeat	1	38	(0)	574513
74	1.2	4.5	1.1	chr11	1481694	1481781	(133604841)	+	(GGCAGG)n	Simple_repeat	1	92	(0)	574646
439	28.5	12.6	2.4	chr11	2089287	2089620	(132997002)	+	MLT1D	LTR/ERVL-MaLR	5	377	(128)	575423
712	33.3	1.1	1.3	chr11	2124880	2127337	(132959285)	+	(TGGA)n	Simple_repeat	1	2485	(0)	575466
28	3.3	0.0	0.0	chr11	2137217	2137247	(132949375)	+	(AGG)n	Simple_repeat	1	31	(0)	575472
13	19.4	0.0	8.9	chr11	2137362	2137417	(132949205)	+	(CCCTCT)n	Simple_repeat	1	56	(0)	575473
15	27.8	1.2	6.0	chr11	2390883	2390964	(132695658)	+	G-rich	Low_complexity	1	83	(0)	575760
29	14.6	1.6	3.1	chr11	2391067	2391130	(132695492)	+	GA-rich	Low_complexity	1	65	(0)	575761
238	28.4	12.0	0.0	chr11	3092056	3092150	(131994472)	+	MIRc	SINE/MIR	47	154	(114)	576571
755	31.7	9.4	1.9	chr11	3175504	3176054	(131910568)	C	L2a	LINE/L2	(14)	3412	2819	576673
15	24.8	3.4	1.6	chr11	3217200	3217258	(131869364)	+	GA-rich	Low_complexity	1	61	(0)	576736
60	16.8	2.8	2.7	chr11	3231534	3231675	(131854947)	+	GA-rich	Low_complexity	1	146	(0)	576750
2017	8.6	10.0	0.0	chr11	3643267	3643546	(131443076)	+	AluSq4	SINE/Alu	1	311	(0)	577376
13	12.1	7.7	2.4	chr11	3855142	3855180	(131231442)	+	(GGAGCTG)n	Simple_repeat	1	42	(0)	577859
13	24.2	4.0	5.1	chr11	6319856	6319930	(128766692)	+	G-rich	Low_complexity	1	78	(0)	581124
14	22.8	3.8	1.8	chr11	6390309	6390361	(128696261)	+	G-rich	Low_complexity	1	55	(0)	581255
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
81	25.2	1.0	0.0	chr11	7604412	7604612	(127482010)	+	(AC)n	Simple_repeat	1	203	(0)	582868
33	5.2	0.0	0.0	chr11	8964364	8964403	(126122219)	+	(GGCTCA)n	Simple_repeat	1	40	(0)	584803
17	16.3	6.8	3.2	chr11	9091607	9091665	(125994957)	+	(CCCGGC)n	Simple_repeat	1	63	(0)	584993
15	27.5	3.1	5.0	chr11	9091819	9091914	(125994708)	+	(GCCCCGC)n	Simple_repeat	1	99	(0)	584994
2993	13.7	10.2	8.7	chr11	9229340	9229899	(125856723)	+	MER39	LTR/ERV1	1	583	(124)	585243
3655	7.8	2.5	0.0	chr11	9900224	9900721	(125185901)	+	LTR10F	LTR/ERV1	1	511	(0)	586732
11	25.0	5.6	4.0	chr11	13668410	13668481	(121418141)	+	(CTCCCG)n	Simple_repeat	1	76	(0)	592645
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
3720	18.3	8.3	5.4	chr11	15034491	15035648	(120050974)	C	MER52C	LTR/ERV1	(0)	1278	2	594845
670	26.0	11.3	0.8	chr11	17431688	17431939	(117654683)	+	L1ME4a	LINE/L1	5837	6118	(6)	598726
13	27.9	3.6	0.0	chr11	17477109	17477164	(117609458)	+	G-rich	Low_complexity	1	58	(0)	598822
632	9.1	0.0	0.0	chr11	17479817	17479937	(117606685)	+	AluJb	SINE/Alu	194	312	(0)	598830
385	18.3	0.0	5.6	chr11	20566223	20566293	(114520329)	+	AluJo	SINE/Alu	1	67	(245)	604148
1807	12.3	0.8	0.8	chr11	20566295	20566557	(114520065)	+	MLT2A2	LTR/ERVL	50	312	(141)	604149
236	32.4	0.7	8.1	chr11	27202075	27202222	(107884400)	+	AmnSINE1	SINE/5S-Deu-L2	224	360	(215)	613572
20	11.7	6.6	4.6	chr11	33700965	33701025	(101385597)	+	(GCCTC)n	Simple_repeat	1	65	(0)	623925
14	19.3	6.4	0.0	chr11	33774502	33774548	(101312074)	+	(CCTGGC)n	Simple_repeat	1	50	(0)	624031
1116	10.8	0.7	0.0	chr11	34243288	34243435	(100843187)	C	AluSx	SINE/Alu	(27)	285	137	624910
12	19.1	2.6	2.6	chr11	35525618	35525655	(99560967)	+	G-rich	Low_complexity	1	39	(0)	626880
15	4.7	0.0	0.0	chr11	43358854	43358875	(91727747)	+	(CTC)n	Simple_repeat	1	22	(0)	638336
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
266	27.6	12.4	0.0	chr11	43937509	43937642	(91148980)	+	L2a	LINE/L2	2090	2242	(1177)	639230
213	21.8	16.1	0.0	chr11	43937672	43937749	(91148873)	+	L2a	LINE/L2	2336	2428	(991)	639230
608	30.6	7.4	4.3	chr11	43937757	43938107	(91148515)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	74	639231
771	19.6	10.2	0.0	chr11	44564177	44564344	(90522278)	C	MER5A	DNA/hAT-Charlie	(0)	189	3	640372
230	28.4	7.3	1.9	chr11	44564374	44564477	(90522145)	+	MIRc	SINE/MIR	128	237	(31)	640373
13	17.9	2.4	4.7	chr11	45665021	45665062	(89421560)	+	(CGC)n	Simple_repeat	1	43	(0)	642546
14	30.9	1.5	1.5	chr11	45665098	45665162	(89421460)	+	(CCGCGC)n	Simple_repeat	1	66	(0)	642547
12	14.1	3.0	2.9	chr11	45805435	45805467	(89281155)	+	(CCTGC)n	Simple_repeat	1	34	(0)	642811
309	26.1	8.0	0.0	chr11	45826288	45826379	(89260243)	C	MIRb	SINE/MIR	(7)	261	162	642861
212	24.5	0.0	2.0	chr11	45826430	45826479	(89260143)	+	MIRc	SINE/MIR	101	149	(119)	642862
1128	18.0	1.3	13.9	chr11	45826485	45826829	(89259793)	+	AluSz	SINE/Alu	1	301	(11)	642863
963	12.9	10.4	0.6	chr11	46127204	46127367	(88959255)	C	MER20	DNA/hAT-Charlie	(0)	219	38	643332
3368	19.0	1.1	1.9	chr11	46159020	46159721	(88926901)	+	L1ME1	LINE/L1	5483	6179	(0)	643391
491	27.7	2.2	5.3	chr11	46238837	46239023	(88847599)	C	MIR	SINE/MIR	(78)	184	4	643570
16	0.0	0.0	0.0	chr11	46617337	46617354	(88469268)	+	(TC)n	Simple_repeat	1	18	(0)	644307
16	8.0	0.0	3.5	chr11	46826822	46826850	(88259772)	+	(CGG)n	Simple_repeat	1	29	(0)	644711
12	16.8	0.0	5.4	chr11	47214886	47214922	(87871700)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	645476
16	18.4	8.4	2.6	chr11	47553221	47553291	(87533331)	+	(GCGCCGA)n	Simple_repeat	1	77	(0)	646146
275	30.9	6.5	9.2	chr11	48000457	48000695	(87085927)	+	L2	LINE/L2	2811	3042	(377)	647333
26	28.3	2.2	5.0	chr11	57322379	57322514	(77764108)	+	(CCTC)n	Simple_repeat	1	139	(0)	653461
15	0.0	0.0	0.0	chr11	59174446	59174462	(75912160)	+	(AG)n	Simple_repeat	1	17	(0)	656443
661	1.4	0.0	0.0	chr11	59557497	59557569	(75529053)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656962
20	13.3	2.3	2.3	chr11	59557606	59557622	(75529000)	+	(TAA)n	Simple_repeat	1	18	(0)	656963
2303	7.3	0.0	1.1	chr11	59557623	59557909	(75528713)	+	AluSq2	SINE/Alu	3	286	(27)	656964
345	29.4	14.1	2.8	chr11	61141548	61141729	(73944893)	+	MIRb	SINE/MIR	26	231	(37)	659565
290	30.6	3.6	3.0	chr11	61160905	61161063	(73925559)	+	MIR3	SINE/MIR	19	175	(87)	659601
14	15.3	0.0	0.0	chr11	61161177	61161205	(73925417)	+	(CCTC)n	Simple_repeat	1	29	(0)	659602
375	35.3	10.3	0.5	chr11	61266617	61266818	(73819804)	+	MIRb	SINE/MIR	3	226	(42)	659829
13	22.3	1.9	5.6	chr11	61281503	61281555	(73805067)	+	GA-rich	Low_complexity	1	54	(0)	659861
25	8.4	2.6	0.0	chr11	61554284	61554321	(73532301)	+	(CA)n	Simple_repeat	1	39	(0)	660397
35	25.5	2.7	1.8	chr11	61554428	61554537	(73532085)	+	(AC)n	Simple_repeat	1	113	(0)	660398
16	26.2	3.8	3.7	chr11	61555735	61555772	(73530850)	+	(GCGT)n	Simple_repeat	1	57	(25)	660400
19	8.3	0.0	0.0	chr11	61555773	61555798	(73530824)	+	(GT)n	Simple_repeat	1	26	(0)	660401
307	30.9	11.7	0.7	chr11	61588273	61588409	(73498213)	C	MIRb	SINE/MIR	(14)	254	101	660453
56	0.0	0.0	0.0	chr11	61595754	61595801	(73490821)	+	(GT)n	Simple_repeat	1	48	(0)	660469
14	12.2	0.0	0.0	chr11	61707861	61707887	(73378735)	+	(GGCAG)n	Simple_repeat	1	27	(0)	660723
34	2.8	0.0	0.0	chr11	61707981	61708016	(73378606)	+	(ATTT)n	Simple_repeat	1	36	(0)	660724
568	23.3	3.2	3.2	chr11	61761747	61761901	(73324721)	+	MIRb	SINE/MIR	91	245	(23)	660802
269	30.1	14.5	4.9	chr11	61762024	61762255	(73324367)	C	L2b	LINE/L2	(209)	3178	2923	660801
350	30.3	5.7	4.1	chr11	61776922	61777093	(73309529)	+	MIR3	SINE/MIR	1	175	(33)	660827
12	17.5	3.1	0.0	chr11	61827628	61827659	(73258963)	+	(CCCG)n	Simple_repeat	1	33	(0)	660908
14	23.6	1.3	7.9	chr11	61917599	61917673	(73168949)	+	(GCCCG)n	Simple_repeat	1	76	(0)	661066
2358	6.5	0.3	0.7	chr11	62537687	62537980	(72548642)	C	AluSg7	SINE/Alu	(16)	293	1	662274
262	28.9	10.1	7.8	chr11	62537981	62538016	(72548606)	C	MIRc	SINE/MIR	(229)	39	9	662275
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
2206	9.1	1.7	2.0	chr11	62557820	62558117	(72528505)	+	AluSq2	SINE/Alu	3	299	(14)	662301
1936	8.1	6.5	0.0	chr11	62653500	62653758	(72432864)	+	AluSx	SINE/Alu	1	277	(35)	662482
12	11.6	3.3	3.2	chr11	62975215	62975244	(72111378)	+	(GGCT)n	Simple_repeat	1	31	(0)	663236
252	26.9	0.0	3.7	chr11	63564961	63565041	(71521581)	+	L1M6	LINE/L1	576	653	(5843)	663891
300	20.2	10.5	11.2	chr11	63565245	63565378	(71521244)	C	L1ME4b	LINE/L1	(47)	845	713	663892
14	18.4	6.6	4.6	chr11	63762143	63762203	(71324419)	+	(TCC)n	Simple_repeat	1	65	(0)	664330
12	19.4	0.0	5.1	chr11	63999442	63999480	(71087142)	+	(GCCCC)n	Simple_repeat	1	39	(0)	664826
518	33.9	2.1	5.5	chr11	64088638	64088837	(70997785)	+	MIRb	SINE/MIR	76	268	(0)	664983
13	21.8	1.7	6.6	chr11	64246852	64246911	(70839711)	+	(CCGCCC)n	Simple_repeat	1	61	(0)	665249
14	9.9	2.8	5.4	chr11	64255615	64255650	(70830972)	+	G-rich	Low_complexity	1	37	(0)	665262
2539	6.5	0.3	0.0	chr11	64256998	64257303	(70829319)	C	AluSp	SINE/Alu	(6)	307	1	665264
1795	18.9	0.3	1.9	chr11	64257333	64257649	(70828973)	+	AluJb	SINE/Alu	1	312	(0)	665265
1383	27.7	5.1	1.4	chr11	64400005	64400421	(70686201)	C	LTR16	LTR/ERVL	(0)	438	6	665551
2043	22.7	7.0	2.8	chr11	64441233	64441807	(70644815)	C	L1ME3	LINE/L1	(4)	6158	5558	665628
257	25.6	14.2	4.3	chr11	64449595	64449733	(70636889)	+	LTR16A1	LTR/ERVL	89	243	(213)	665650
3923	19.2	5.8	1.0	chr11	64524468	64525302	(70561320)	+	MER21B	LTR/ERVL	1	868	(0)	665789
192	38.9	3.1	2.3	chr11	64854974	64855102	(70231520)	+	MIRb	SINE/MIR	100	229	(39)	666342
240	32.8	11.9	6.7	chr11	64889019	64889374	(70197248)	C	L2c	LINE/L2	(7)	3380	3004	666395
929	17.9	8.7	0.0	chr11	64918635	64918802	(70167820)	C	AluSz6	SINE/Alu	(7)	305	122	666435
18	15.3	0.0	6.1	chr11	64999167	64999215	(70087407)	+	GA-rich	Low_complexity	1	49	(0)	666623
243	27.2	11.7	10.5	chr11	64999262	64999293	(70087329)	C	MIR3	SINE/MIR	(42)	166	136	666624
204	23.4	0.0	2.1	chr11	65013522	65013569	(70073053)	+	MIR1_Amn	SINE/MIR	118	164	(66)	666669
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
1462	14.1	5.5	2.8	chr11	65042844	65043092	(70043530)	C	AluJo	SINE/Alu	(18)	294	39	666742
13	28.8	0.0	5.7	chr11	65315385	65315454	(69771168)	+	(CGGAGC)n	Simple_repeat	1	70	(0)	667294
2069	10.9	2.0	4.2	chr11	65419661	65419973	(69666649)	+	AluSz	SINE/Alu	1	306	(6)	667509
12	15.4	5.9	8.3	chr11	65577266	65577333	(69509289)	+	G-rich	Low_complexity	1	72	(0)	667802
13	22.1	0.0	6.2	chr11	65652660	65652707	(69433915)	+	(CCGCC)n	Simple_repeat	1	48	(0)	667895
17	14.2	1.9	7.3	chr11	66288893	66288946	(68797676)	+	(CGCGC)n	Simple_repeat	1	55	(0)	669184
320	32.7	12.9	2.5	chr11	66369947	66370421	(68716201)	+	L2c	LINE/L2	2830	3373	(14)	669339
13	16.2	0.0	5.3	chr11	66371654	66371691	(68714931)	+	G-rich	Low_complexity	1	38	(0)	669343
1896	8.1	0.0	13.2	chr11	66372449	66372781	(68713841)	C	AluSx	SINE/Alu	(23)	289	1	669345
233	26.9	8.1	6.6	chr11	66372782	66372811	(68713811)	C	ORSL-2b	DNA/hAT-Tip100	(263)	245	216	669344
211	40.0	1.0	0.0	chr11	66372818	66372917	(68713705)	+	L2b	LINE/L2	3224	3324	(51)	669346
349	29.7	5.6	0.0	chr11	66904026	66904126	(68182496)	C	MIRc	SINE/MIR	(26)	242	136	670458
1646	15.2	0.7	2.9	chr11	67390955	67391230	(67695392)	+	AluJo	SINE/Alu	35	304	(8)	671562
431	29.9	0.9	0.0	chr11	67417009	67417115	(67669507)	C	L2a	LINE/L2	(5)	3421	3314	671608
13	13.1	0.0	0.0	chr11	68004128	68004153	(67082469)	+	(CCCCG)n	Simple_repeat	1	26	(0)	672598
18	27.1	0.0	0.0	chr11	68004175	68004217	(67082405)	+	(GT)n	Simple_repeat	1	43	(0)	672599
480	25.9	6.7	5.1	chr11	68004250	68004424	(67082198)	+	MIR	SINE/MIR	49	226	(36)	672600
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
13	8.2	3.9	0.0	chr11	68460278	68460303	(66626319)	+	(CCCCG)n	Simple_repeat	1	27	(0)	673467
11	16.9	2.9	2.8	chr11	68839232	68839266	(66247356)	+	(CCGCCG)n	Simple_repeat	1	36	(0)	674056
815	18.8	2.4	0.0	chr11	69048544	69048703	(66037919)	C	MER5A	DNA/hAT-Charlie	(20)	169	6	674460
315	26.3	15.2	3.5	chr11	69274402	69274598	(65812024)	+	MIR	SINE/MIR	27	250	(12)	674820
19	20.7	0.0	7.1	chr11	69704122	69704191	(65382431)	+	(GCCCCC)n	Simple_repeat	1	70	(0)	675534
246	35.6	40.2	0.8	chr11	70675967	70676208	(64410414)	+	L2c	LINE/L2	2999	3336	(39)	677191
12	15.9	5.7	0.0	chr11	72752365	72752399	(62334223)	+	(ACCGCC)n	Simple_repeat	1	37	(0)	680518
16	18.0	0.0	2.5	chr11	72752465	72752504	(62334118)	+	G-rich	Low_complexity	1	40	(0)	680519
295	25.0	12.8	3.0	chr11	73386045	73386172	(61700450)	C	MIR3	SINE/MIR	(85)	183	48	681742
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
359	27.2	8.6	1.9	chr11	74001740	74001931	(61084691)	C	MIR	SINE/MIR	(45)	217	9	683202
18	14.2	0.0	3.0	chr11	74465574	74465606	(60621016)	+	(CA)n	Simple_repeat	1	33	(0)	684133
541	28.2	11.9	0.6	chr11	74465662	74465839	(60620783)	+	MIRc	SINE/MIR	55	255	(13)	684134
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
545	24.9	7.0	6.1	chr11	74493875	74494088	(60592534)	C	L2a	LINE/L2	(5)	3421	3206	684202
33	16.0	4.6	2.2	chr11	75351690	75351806	(59734816)	+	(CCCGCTC)n	Simple_repeat	1	119	(0)	685854
27	15.2	0.0	0.0	chr11	75351828	75351872	(59734750)	+	(GT)n	Simple_repeat	1	45	(0)	685855
28	5.6	12.5	0.0	chr11	75351972	75351979	(59734643)	+	(GT)n	Simple_repeat	1	30	(33)	685856
21	0.0	2.4	9.3	chr11	75351980	75352021	(59734601)	+	(GTG)n	Simple_repeat	1	43	(0)	685857
5177	19.4	6.4	2.4	chr11	75532597	75533015	(59553607)	C	Charlie1a	DNA/hAT-Charlie	(4)	1451	1005	686275
14	30.3	0.0	1.9	chr11	76381067	76381120	(58705502)	+	(CCG)n	Simple_repeat	1	54	(0)	687900
380	20.3	8.9	7.6	chr11	76745816	76745959	(58340663)	+	LTR16E1	LTR/ERVL	392	537	(1)	688589
16	6.7	0.0	8.1	chr11	77066885	77066921	(58019701)	+	(GGGCG)n	Simple_repeat	1	37	(0)	689201
2335	17.5	6.6	0.2	chr11	82680126	82680538	(52406084)	+	LTR8	LTR/ERV1	1	441	(250)	699273
8110	20.4	7.4	6.9	chr11	82680539	82682499	(52404123)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	664	699274
13	19.2	6.1	1.9	chr11	82733767	82733815	(52352807)	+	(CGCCCC)n	Simple_repeat	1	52	(0)	699379
873	15.9	0.0	0.0	chr11	83009940	83010065	(52076557)	C	AluJr	SINE/Alu	(185)	127	2	699840
1698	20.1	2.6	0.0	chr11	83010169	83010467	(52076155)	+	AluJr4	SINE/Alu	1	307	(5)	699841
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
76	2.7	0.0	1.3	chr11	86776207	86776284	(48310338)	+	(TC)n	Simple_repeat	1	78	(0)	706102
270	31.8	5.9	3.0	chr11	86776285	86776507	(48310115)	C	CR1-16_AMi	LINE/CR1	(217)	634	404	706103
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
215	27.8	12.5	1.6	chr11	95109150	95109277	(39977345)	C	L3	LINE/CR1	(18)	4081	3938	718149
19	12.2	2.7	0.0	chr11	96389853	96389889	(38696733)	+	(CGCCTC)n	Simple_repeat	1	38	(0)	720073
522	28.4	2.6	1.8	chr11	102011191	102011419	(33075203)	+	LTR16A	LTR/ERVL	21	251	(200)	727193
880	26.7	5.7	2.8	chr11	102011424	102011822	(33074800)	+	L1M5	LINE/L1	4333	4739	(1407)	727194
21	22.7	4.1	4.8	chr11	102452775	102452889	(32633733)	+	G-rich	Low_complexity	1	114	(0)	727947
2148	10.7	1.4	6.2	chr11	102454367	102454675	(32631947)	+	AluSz	SINE/Alu	5	298	(14)	727950
13	27.9	2.9	2.9	chr11	110429986	110430053	(24656569)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	739820
15	27.4	0.0	7.4	chr11	112290194	112290274	(22796348)	+	G-rich	Low_complexity	1	81	(0)	742898
438	35.7	10.5	3.2	chr11	112828502	112829196	(22257426)	+	L2c	LINE/L2	2388	3154	(233)	743713
28	22.3	1.4	0.0	chr11	114232593	114232661	(20853961)	+	G-rich	Low_complexity	1	70	(0)	745945
542	23.9	6.1	2.1	chr11	115146807	115149020	(19937602)	+	(GT)n	Simple_repeat	1	2301	(0)	747285
396	13.8	12.1	0.0	chr11	115581697	115581776	(19504846)	C	MER20	DNA/hAT-Charlie	(0)	219	129	747868
773	18.0	10.2	0.0	chr11	115581962	115582128	(19504494)	+	Tigger9b	DNA/TcMar-Tigger	31	216	(408)	747869
4121	12.4	5.8	4.4	chr11	115582310	115582529	(19504093)	C	MER50	LTR/ERV1	(23)	711	486	747870
1861	15.8	0.0	4.5	chr11	116490374	116490683	(18595939)	C	AluSz6	SINE/Alu	(12)	300	5	749423
625	27.7	8.4	0.0	chr11	116490761	116490955	(18595667)	+	MIR	SINE/MIR	31	243	(19)	749424
340	34.4	5.3	2.4	chr11	116958226	116958389	(18128233)	+	L3	LINE/CR1	3717	3885	(214)	750216
276	32.5	4.8	3.1	chr11	116958441	116958602	(18128020)	C	L2c	LINE/L2	(41)	3346	3182	750217
23	11.1	0.0	0.0	chr11	117144738	117144776	(17941846)	+	(GCCCT)n	Simple_repeat	1	39	(0)	750609
404	34.3	6.5	5.4	chr11	117309366	117309470	(17777152)	+	L2c	LINE/L2	3029	3126	(261)	750919
539	9.2	25.8	0.0	chr11	117309471	117309568	(17777054)	+	FLAM_C	SINE/Alu	1	132	(11)	750922
404	34.3	6.5	5.4	chr11	117309569	117309813	(17776809)	+	L2c	LINE/L2	3127	3383	(4)	750919
17	24.0	3.0	2.9	chr11	117907304	117907370	(17179252)	+	(GGCGT)n	Simple_repeat	1	69	(0)	751947
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
13	7.0	6.2	2.9	chr11	118634880	118634911	(16451711)	+	(CTCGCC)n	Simple_repeat	1	34	(0)	753264
13	18.5	2.6	2.5	chr11	118635059	118635097	(16451525)	+	(CCCCCGG)n	Simple_repeat	1	40	(0)	753265
12	21.0	5.9	1.9	chr11	118910433	118910483	(16176139)	+	(CCAGCC)n	Simple_repeat	1	54	(0)	753852
617	29.5	14.8	5.4	chr11	119155620	119156148	(15930474)	+	L2c	LINE/L2	2792	3382	(5)	754345
18	6.7	0.0	5.7	chr11	119205984	119206018	(15880604)	+	(CCGCC)n	Simple_repeat	1	35	(0)	754441
11	19.2	2.1	6.2	chr11	119368843	119368889	(15717733)	+	G-rich	Low_complexity	1	48	(0)	754751
392	27.6	5.6	0.0	chr11	119943405	119943538	(15143084)	+	MER5B	DNA/hAT-Charlie	1	142	(36)	755721
14	14.4	3.2	0.0	chr11	120121951	120121981	(14964641)	+	(CAGG)n	Simple_repeat	1	32	(0)	755994
46	2.3	0.0	0.0	chr11	120122121	120122164	(14964458)	+	(TG)n	Simple_repeat	1	44	(0)	755995
1123	15.9	2.4	5.0	chr11	120306411	120306628	(14779994)	C	MER20	DNA/hAT-Charlie	(2)	217	6	756324
345	24.9	3.0	1.2	chr11	121391989	121392107	(13694515)	+	MLT1J	LTR/ERVL-MaLR	63	187	(325)	758030
250	15.0	0.0	0.0	chr11	121392255	121392294	(13694328)	+	MLT1J	LTR/ERVL-MaLR	416	455	(57)	758032
2425	8.2	0.0	0.0	chr11	121465533	121465825	(13620797)	C	AluSc8	SINE/Alu	(17)	294	2	758161
180	14.3	0.0	0.0	chr11	121465837	121465864	(13620758)	C	MER5B	DNA/hAT-Charlie	(45)	133	106	758162
24	25.7	4.4	3.4	chr11	122882875	122882987	(12203635)	+	(GGC)n	Simple_repeat	1	118	(0)	760399
13	13.2	6.1	0.0	chr11	124673756	124673788	(10412834)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	763397
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
18	11.0	2.3	4.5	chr11	128507250	128507292	(6579330)	+	G-rich	Low_complexity	1	44	(0)	769002
4297	17.2	4.5	6.6	chr11	128896214	128896607	(6190015)	C	L1MD1	LINE/L1	(0)	6242	5821	769541
68	4.1	0.0	0.0	chr11	134037051	134037125	(1049497)	+	(ACTCTTCTCG)n	Simple_repeat	1	75	(0)	776693
1310	22.2	3.5	1.3	chr12	547183	547492	(132727817)	+	L1MA4A	LINE/L1	5985	6301	(2)	778944
18	3.2	2.8	5.4	chr12	570670	570705	(132704604)	+	(GCCCTG)n	Simple_repeat	1	37	(0)	778981
705	26.9	4.3	4.0	chr12	958512	958659	(132316650)	C	MLT1G1	LTR/ERVL-MaLR	(362)	217	1	779778
319	30.9	5.0	6.4	chr12	958846	959049	(132316260)	+	AmnSINE1	SINE/5S-Deu-L2	277	477	(98)	779780
16	17.7	1.7	6.8	chr12	991627	991684	(132283625)	+	G-rich	Low_complexity	1	59	(0)	779869
2049	14.8	1.2	0.0	chr12	1212539	1212875	(132062434)	C	MER61A	LTR/ERV1	(0)	341	1	780307
422	33.2	13.4	4.5	chr12	1212876	1212942	(132062367)	+	L2c	LINE/L2	3327	3387	(0)	780306
1830	12.9	5.7	0.0	chr12	1507054	1507332	(131767977)	+	AluSz	SINE/Alu	1	296	(16)	780776
2633	22.6	9.5	5.9	chr12	1706588	1706844	(131568465)	C	L1ME1	LINE/L1	(3)	6176	5926	781141
894	20.8	1.3	0.0	chr12	1706845	1706998	(131568311)	+	FRAM	SINE/Alu	1	156	(20)	781142
67	0.0	0.0	0.0	chr12	2358252	2358308	(130917001)	+	(TG)n	Simple_repeat	1	57	(0)	782091
21	26.1	2.5	2.4	chr12	2795036	2795116	(130480193)	+	(CCGCGC)n	Simple_repeat	1	83	(0)	782670
1564	10.6	17.5	0.0	chr12	2813042	2813286	(130462023)	C	AluSx1	SINE/Alu	(15)	297	1	782699
777	25.5	17.9	0.2	chr12	3103786	3104309	(130171000)	C	L2a	LINE/L2	(6)	3420	2775	783322
230	22.4	10.4	9.7	chr12	3203141	3203311	(130071998)	+	L2a	LINE/L2	3190	3426	(0)	783497
336	34.6	5.8	1.2	chr12	3242402	3242565	(130032744)	C	MIR3	SINE/MIR	(36)	172	1	783555
651	37.1	5.6	7.5	chr12	3472959	3474190	(129801119)	+	L2c	LINE/L2	1708	2914	(505)	783900
12	29.7	0.0	2.1	chr12	4031354	4031401	(129243908)	+	(GCGCT)n	Simple_repeat	1	48	(0)	784813
12	15.7	6.5	4.1	chr12	4031390	4031435	(129243874)	+	(GCGCC)n	Simple_repeat	1	49	(0)	784814
16	0.0	0.0	0.0	chr12	4031587	4031603	(129243706)	+	(T)n	Simple_repeat	1	17	(0)	784815
194	30.1	1.7	0.0	chr12	6193962	6194026	(127081283)	+	MIR1_Amn	SINE/MIR	23	83	(125)	788219
232	29.0	18.1	0.0	chr12	6272885	6273015	(127002294)	C	MamTip2	DNA/hAT-Tip100	(142)	163	4	788370
1289	16.1	7.5	7.5	chr12	6273065	6273239	(127002070)	C	AluJo	SINE/Alu	(20)	292	127	788371
619	25.5	2.5	10.1	chr12	6326333	6326402	(126948907)	+	MIRb	SINE/MIR	205	262	(6)	788484
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
480	30.4	1.3	1.3	chr12	6372174	6372323	(126902986)	+	MIRb	SINE/MIR	89	238	(30)	788581
1529	11.5	6.9	0.0	chr12	6540809	6541025	(126734284)	+	AluSg	SINE/Alu	1	233	(77)	788912
13	4.2	8.0	0.0	chr12	6603352	6603376	(126671933)	+	(CTCC)n	Simple_repeat	1	27	(0)	789021
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
16	15.1	6.8	0.0	chr12	6764153	6764196	(126511113)	+	(CCCACAG)n	Simple_repeat	1	47	(0)	789347
13	19.6	0.0	0.0	chr12	6852831	6852860	(126422449)	+	G-rich	Low_complexity	1	30	(0)	789516
19	15.3	0.0	6.1	chr12	8033623	8033671	(125241638)	+	(CCT)n	Simple_repeat	1	49	(0)	791669
2358	9.8	0.3	0.7	chr12	12713058	12713363	(120561946)	C	AluSz	SINE/Alu	(7)	305	1	798626
1169	23.5	9.9	5.2	chr12	12713364	12713536	(120561773)	+	L2a	LINE/L2	2928	3138	(288)	798625
1384	29.7	8.2	1.8	chr12	12803119	12803632	(120471677)	C	MLT1N2	LTR/ERVL-MaLR	(7)	555	6	798808
638	26.3	14.3	1.3	chr12	12878069	12878299	(120397010)	+	MIRc	SINE/MIR	2	267	(1)	798975
59	3.3	0.0	0.0	chr12	13000193	13000254	(120275055)	+	(GGCGGCAG)n	Simple_repeat	1	62	(0)	799225
15	12.1	3.9	7.4	chr12	13000268	13000319	(120274990)	+	(GGCAGA)n	Simple_repeat	1	54	(0)	799226
31	3.0	0.0	0.0	chr12	13000447	13000480	(120274829)	+	(GCAGCAGT)n	Simple_repeat	1	34	(0)	799227
12	4.7	4.5	0.0	chr12	13098306	13098327	(120176982)	+	(TTTA)n	Simple_repeat	1	23	(0)	799367
777	21.4	1.7	1.1	chr12	13098876	13099050	(120176259)	+	Arthur1A	DNA/hAT-Tip100	1	176	(1)	799369
14	15.8	4.3	4.2	chr12	13101148	13101193	(120174116)	+	G-rich	Low_complexity	1	48	(0)	799372
1418	31.1	8.3	3.9	chr12	13221822	13222456	(120052853)	C	MER115	DNA/hAT-Tip100	(22)	671	7	799548
24	20.6	0.0	5.4	chr12	21501481	21501554	(111773755)	+	(TCTCCGA)n	Simple_repeat	1	74	(0)	810844
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
19	23.4	5.6	3.2	chr12	25251107	25251196	(108024113)	+	G-rich	Low_complexity	1	95	(0)	816205
4081	16.2	11.0	0.9	chr12	25950639	25951375	(107323934)	C	LTR8B	LTR/ERV1	(0)	820	1	817273
491	27.6	7.7	1.2	chr12	25992288	25992456	(107282853)	+	MIR	SINE/MIR	11	191	(71)	817350
180	26.2	0.0	11.1	chr12	25992518	25992607	(107282702)	C	L2c	LINE/L2	(221)	3154	3075	817349
239	26.8	23.4	1.6	chr12	27012159	27012351	(106262958)	+	MIRb	SINE/MIR	20	267	(1)	818841
1849	16.0	2.7	0.3	chr12	27236352	27236645	(106038664)	C	AluJr	SINE/Alu	(11)	301	1	819242
1417	21.0	10.9	2.3	chr12	27236726	27237120	(106038189)	+	LTR16	LTR/ERVL	2	434	(4)	819243
1235	13.5	0.5	1.1	chr12	27359888	27360072	(105915237)	+	AluJb	SINE/Alu	119	302	(10)	819432
1509	21.6	6.9	1.8	chr12	29713799	29714185	(103561124)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	822749
999	20.9	1.1	7.7	chr12	30047725	30048136	(103227173)	+	MLT2B2	LTR/ERVL	186	562	(0)	823202
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
12	24.2	4.5	0.0	chr12	31362973	31363016	(101912293)	+	(TGCA)n	Simple_repeat	1	46	(0)	825107
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
26	0.0	0.0	0.0	chr12	32399402	32399426	(100875883)	+	(GGC)n	Simple_repeat	1	25	(0)	827410
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
12	12.6	0.0	3.6	chr12	32897112	32897139	(100378170)	+	(GCCCC)n	Simple_repeat	1	28	(0)	828310
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
2422	11.0	0.0	0.0	chr12	40046893	40047201	(93228108)	C	AluSz	SINE/Alu	(3)	309	1	833220
216	31.9	11.3	1.1	chr12	40047244	40047338	(93227971)	+	L2a	LINE/L2	3309	3414	(12)	833221
2209	10.3	0.0	0.3	chr12	42126074	42126363	(91148946)	C	AluSx	SINE/Alu	(12)	300	12	836030
9501	4.0	0.8	14.9	chr12	42349404	42351015	(90924294)	C	SVA_B	Retroposon/SVA	(0)	1383	1	836483
1899	23.8	3.6	7.3	chr12	46100857	46101432	(87173877)	C	MLT2B3	LTR/ERVL	(0)	554	1	841823
418	31.8	3.7	6.5	chr12	46476408	46476473	(86798836)	C	L1M5	LINE/L1	(1143)	5003	4934	842338
220	32.6	9.4	2.9	chr12	47812744	47812882	(85462427)	C	MIRb	SINE/MIR	(116)	152	4	844235
12	20.1	2.9	0.0	chr12	49070012	49070045	(84205264)	+	(GCCGC)n	Simple_repeat	1	35	(0)	846320
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
27	12.2	0.0	5.1	chr12	49297595	49297653	(83977656)	+	G-rich	Low_complexity	1	59	(0)	846902
14	16.4	0.0	5.3	chr12	49337136	49337173	(83938136)	+	(TCCC)n	Simple_repeat	1	38	(0)	846988
18	20.5	1.9	1.9	chr12	49344968	49345021	(83930288)	+	(CCTCCCG)n	Simple_repeat	1	54	(0)	847001
634	24.7	5.4	12.8	chr12	49404005	49404274	(83871035)	C	L2c	LINE/L2	(0)	3387	3140	847131
2147	15.5	2.6	0.0	chr12	49404275	49404577	(83870732)	C	AluJr	SINE/Alu	(0)	312	2	847132
17	20.5	0.0	9.5	chr12	49623347	49623420	(83651889)	+	G-rich	Low_complexity	1	74	(0)	847520
286	36.0	2.1	3.8	chr12	49970623	49970859	(83304450)	C	L2	LINE/L2	(1953)	1466	1234	848165
14	18.1	0.0	4.9	chr12	50073450	50073490	(83201819)	+	(GCTG)n	Simple_repeat	1	41	(0)	848368
14	24.9	0.0	0.0	chr12	50085032	50085070	(83190239)	+	G-rich	Low_complexity	1	39	(0)	848384
17	24.8	3.5	0.0	chr12	50085265	50085321	(83189988)	+	G-rich	Low_complexity	1	59	(0)	848385
273	30.4	6.1	3.4	chr12	50275618	50275825	(82999484)	C	L2c	LINE/L2	(246)	3141	2928	848825
2185	12.4	0.0	0.3	chr12	51014570	51014876	(82260433)	+	AluSx1	SINE/Alu	1	306	(6)	850410
1833	16.1	1.3	1.0	chr12	51089119	51089416	(82185893)	+	AluJr	SINE/Alu	1	299	(13)	850576
944	13.9	6.3	1.3	chr12	51089423	51089573	(82185736)	+	AluJr	SINE/Alu	140	298	(14)	850577
285	24.0	29.2	0.0	chr12	51308202	51308322	(81966987)	+	MIR3	SINE/MIR	33	203	(5)	851084
1812	16.4	2.6	0.0	chr12	51333395	51333692	(81941617)	C	AluJo	SINE/Alu	(6)	306	1	851149
2240	11.4	0.0	1.3	chr12	51835803	51836109	(81439200)	C	AluSq2	SINE/Alu	(9)	304	2	851980
17	11.0	4.7	4.4	chr12	51836244	51836286	(81439023)	+	GA-rich	Low_complexity	1	45	(0)	851981
216	27.3	0.0	4.3	chr12	51836672	51836740	(81438569)	C	L2c	LINE/L2	(0)	3387	3322	851982
209	30.1	6.7	3.2	chr12	51951201	51951358	(81323951)	C	L2	LINE/L2	(619)	2800	2637	852207
42	24.5	2.4	5.2	chr12	51951569	51951617	(81323692)	+	(CGG)n	Simple_repeat	1	74	(100)	852208
19	20.5	4.6	5.5	chr12	52023638	52023724	(81251585)	+	(CCCTGC)n	Simple_repeat	1	91	(0)	852322
226	30.2	6.2	3.6	chr12	52026122	52026231	(81249078)	+	MIRc	SINE/MIR	141	253	(15)	852329
16	21.9	4.7	0.0	chr12	52037162	52037204	(81238105)	+	(GC)n	Simple_repeat	1	45	(0)	852349
12	15.5	3.5	0.0	chr12	52147359	52147387	(81127922)	+	G-rich	Low_complexity	1	30	(0)	852516
12	10.6	2.9	5.7	chr12	52151988	52152021	(81123288)	+	(GGCGT)n	Simple_repeat	1	35	(0)	852522
40	6.7	0.0	0.0	chr12	52155693	52155740	(81119569)	+	(TG)n	Simple_repeat	1	48	(0)	852531
19	19.2	0.0	0.0	chr12	52203300	52203335	(81071974)	+	(TG)n	Simple_repeat	1	36	(0)	852620
188	19.1	7.8	2.1	chr12	52690990	52691037	(80584272)	+	Tigger19b	DNA/TcMar-Tigger	484	534	(16)	853275
257	27.7	8.7	0.0	chr12	52708278	52708371	(80566938)	+	L3b	LINE/CR1	4930	5032	(200)	853305
21	22.6	5.4	1.3	chr12	53052753	53052826	(80222483)	+	GA-rich	Low_complexity	1	78	(0)	853989
2304	10.3	1.0	0.0	chr12	53066831	53067130	(80208179)	+	AluSx	SINE/Alu	1	303	(9)	854004
23	7.8	2.2	4.3	chr12	53097732	53097776	(80177533)	+	(GCT)n	Simple_repeat	1	46	(0)	854054
533	23.2	9.7	7.8	chr12	53207403	53207594	(80067715)	C	MIRb	SINE/MIR	(13)	255	60	854261
1003	15.0	2.5	0.0	chr12	53267770	53267922	(80007387)	+	AluJr	SINE/Alu	136	292	(20)	854385
359	31.7	15.0	2.9	chr12	53274228	53274601	(80000708)	C	L2a	LINE/L2	(529)	2890	2464	854390
182	26.0	0.0	5.7	chr12	53339223	53339275	(79936034)	+	L3	LINE/CR1	1600	1649	(2450)	854507
17	16.8	0.0	7.4	chr12	53972863	53972916	(79302393)	+	(ACCCC)n	Simple_repeat	1	54	(0)	855720
17	18.4	0.0	0.0	chr12	53973817	53973853	(79301456)	+	(GGCGGA)n	Simple_repeat	1	37	(0)	855721
23	17.1	4.2	4.0	chr12	53973947	53974017	(79301292)	+	G-rich	Low_complexity	1	74	(0)	855722
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
11	21.6	0.0	4.9	chr12	54018715	54018755	(79256554)	+	(ACGCAC)n	Simple_repeat	1	41	(0)	855762
14	24.0	0.0	0.0	chr12	54034186	54034224	(79241085)	+	G-rich	Low_complexity	1	39	(0)	855769
16	8.3	0.0	0.0	chr12	54037581	54037606	(79237703)	+	(AAAT)n	Simple_repeat	1	26	(0)	855772
194	15.9	14.9	4.5	chr12	54152672	54152737	(79122572)	C	L2	LINE/L2	(2933)	486	413	855947
1756	10.1	8.2	0.8	chr12	54288642	54288899	(78986410)	+	AluSx3	SINE/Alu	1	279	(32)	856178
1677	15.9	8.9	0.0	chr12	54311396	54311672	(78963637)	+	AluJr	SINE/Alu	3	306	(6)	856225
12	30.5	0.0	5.6	chr12	54391299	54391369	(78883940)	+	G-rich	Low_complexity	1	71	(0)	856367
10468	5.3	0.9	5.5	chr12	55647752	55649189	(77626120)	C	SVA_B	Retroposon/SVA	(0)	1383	12	857990
15	5.6	0.0	0.0	chr12	55830816	55830834	(77444475)	+	(CG)n	Simple_repeat	1	19	(0)	858324
22	15.1	0.0	0.0	chr12	55830834	55830870	(77444439)	+	(CA)n	Simple_repeat	1	37	(0)	858325
13	13.2	0.0	0.0	chr12	55974045	55974069	(77301240)	+	(GAG)n	Simple_repeat	1	25	(0)	858642
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
13	23.1	0.0	0.0	chr12	56152593	56152628	(77122681)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	858986
2241	15.2	6.5	2.7	chr12	56387134	56387431	(76887878)	C	MSTB1	LTR/ERVL-MaLR	(109)	323	5	859437
6738	17.6	19.4	2.8	chr12	56412191	56413643	(76861666)	C	MER52A	LTR/ERV1	(0)	1755	4	859482
1665	13.2	6.7	2.8	chr12	56689295	56689581	(76585728)	+	AluSx	SINE/Alu	1	299	(13)	860043
916	25.4	5.8	0.4	chr12	57100225	57100469	(76174840)	C	MIR	SINE/MIR	(0)	262	4	860696
19	12.0	0.0	2.6	chr12	57211390	57211427	(76063882)	+	(CCCTG)n	Simple_repeat	1	38	(0)	860858
17	19.5	9.4	2.1	chr12	57211428	57211472	(76063837)	+	(GCCCCT)n	Simple_repeat	3	93	(0)	860859
13	23.2	0.0	0.0	chr12	57237169	57237204	(76038105)	+	(CAGCC)n	Simple_repeat	1	36	(0)	860885
11	34.6	2.9	0.0	chr12	57547085	57547153	(75728156)	+	G-rich	Low_complexity	1	71	(0)	861491
12	34.2	0.0	1.7	chr12	57726605	57726664	(75548645)	+	(GGT)n	Simple_repeat	1	60	(0)	861754
18	17.1	2.9	7.1	chr12	57754990	57755064	(75520245)	+	(CTCCC)n	Simple_repeat	1	71	(0)	861785
11034	12.4	4.0	2.8	chr12	59547662	59549823	(73725486)	C	L1P3	LINE/L1	(4277)	2222	3	864225
13	17.4	0.0	2.9	chr12	59596063	59596096	(73679213)	+	(CGCCTC)n	Simple_repeat	1	34	(0)	864295
2100	22.4	4.9	2.7	chr12	62724666	62725260	(70550049)	C	Kanga1b	DNA/TcMar-Tc2	(3)	776	168	868388
3170	8.3	1.0	14.5	chr12	63419099	63419690	(69855619)	+	LTR10F	LTR/ERV1	1	511	(0)	869382
1902	9.7	8.0	0.4	chr12	64608320	64608597	(68666712)	C	AluSq2	SINE/Alu	(12)	301	1	871471
252	29.4	3.8	1.0	chr12	64680402	64680504	(68594805)	+	L2b	LINE/L2	3264	3369	(6)	871615
17	12.0	2.6	2.6	chr12	64824593	64824630	(68450679)	+	(CGCT)n	Simple_repeat	1	39	(0)	871866
441	33.6	4.0	2.2	chr12	65602915	65603138	(67672171)	+	L2a	LINE/L2	3146	3414	(12)	873029
2143	15.2	5.2	4.0	chr12	67744663	67745040	(65530269)	C	MSTA	LTR/ERVL-MaLR	(0)	428	46	876366
886	6.7	0.0	0.0	chr12	67745041	67745145	(65530164)	C	AluSz6	SINE/Alu	(11)	301	197	876367
330	20.3	1.3	0.0	chr12	68539015	68539088	(64736221)	C	LTR85a	LTR/Gypsy?	(608)	94	20	877577
2145	8.6	1.7	2.3	chr12	68807302	68807602	(64467707)	C	AluSx1	SINE/Alu	(13)	299	1	878135
2225	12.3	1.3	1.6	chr12	68844759	68845067	(64430242)	C	AluSx1	SINE/Alu	(4)	308	1	878213
27	3.3	0.0	0.0	chr12	70366181	70366211	(62909098)	+	(GGGCG)n	Simple_repeat	1	31	(0)	880781
5352	24.5	3.6	1.9	chr12	75435899	75438581	(57836728)	C	L1PA15-16	LINE/L1	(3607)	3308	765	887537
13	16.2	5.4	6.8	chr12	76764091	76764146	(56511163)	+	GA-rich	Low_complexity	1	59	(0)	889813
12	7.8	3.2	6.2	chr12	76879075	76879105	(56396204)	+	(CCGCC)n	Simple_repeat	1	32	(0)	889997
541	32.3	8.9	6.9	chr12	76890598	76891089	(56384220)	C	Tigger12	DNA/TcMar-Tigger	(1970)	505	3	890023
245	18.9	13.5	6.2	chr12	82650728	82650823	(50624486)	C	LTR104_Mam	LTR/Gypsy	(744)	765	662	898041
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
4636	15.8	4.5	3.9	chr12	93235414	93236255	(40039054)	+	LTR1D1	LTR/ERV1	1	812	(87)	913002
15	27.7	0.0	4.5	chr12	93570274	93570339	(39704970)	+	G-rich	Low_complexity	1	66	(0)	913736
30	18.5	2.7	1.3	chr12	93571496	93571570	(39703739)	+	(CTCC)n	Simple_repeat	1	77	(0)	913738
185	35.5	9.6	0.0	chr12	94104259	94104399	(39170910)	C	L2c	LINE/L2	(919)	2500	2345	914668
12	16.8	10.6	0.0	chr12	94649867	94649913	(38625396)	+	(CCGCGCT)n	Simple_repeat	1	52	(0)	915565
763	9.1	1.0	0.0	chr12	94662319	94662417	(38612892)	+	AluSz	SINE/Alu	37	136	(176)	915592
2128	14.8	0.0	0.0	chr12	94662418	94662722	(38612587)	+	AluSz6	SINE/Alu	2	306	(6)	915593
645	1.3	0.0	0.0	chr12	96036021	96036095	(37239214)	+	tRNA-Asp-GAY	tRNA	1	75	(0)	918300
1512	22.1	12.3	2.1	chr12	96094033	96094501	(37180808)	C	L2a	LINE/L2	(1)	3425	2907	918424
316	30.5	9.7	6.8	chr12	98418950	98419199	(34856110)	+	MIRc	SINE/MIR	9	266	(2)	922176
649	2.8	0.0	0.0	chr12	98503503	98503574	(34771735)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	922374
1589	19.5	1.3	2.0	chr12	101496656	101496957	(31778352)	C	AluJb	SINE/Alu	(8)	304	5	927440
323	21.4	0.0	8.7	chr12	101496958	101496976	(31778333)	+	MER21C	LTR/ERVL	101	116	(822)	927439
482	26.8	8.6	4.9	chr12	101497012	101497157	(31778152)	+	MER21C	LTR/ERVL	199	351	(587)	927439
1027	27.0	12.2	8.2	chr12	101824005	101824405	(31450904)	+	MLT1K	LTR/ERVL-MaLR	40	488	(107)	928009
26	16.3	3.5	6.7	chr12	101830884	101830970	(31444339)	+	(CGG)n	Simple_repeat	1	90	(0)	928029
15	16.9	0.0	0.0	chr12	101831053	101831085	(31444224)	+	G-rich	Low_complexity	1	33	(0)	928030
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
1505	26.0	7.6	2.1	chr12	102107543	102108033	(31167276)	+	L1ME3B	LINE/L1	5661	6190	(52)	928567
1483	23.4	8.8	11.6	chr12	102108034	102108604	(31166705)	+	MLT2B3	LTR/ERVL	1	554	(0)	928568
450	28.5	5.1	2.6	chr12	103680675	103680865	(29594444)	C	MLT1K	LTR/ERVL-MaLR	(396)	199	4	931079
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
376	27.6	12.8	3.3	chr12	104738573	104738799	(28536510)	C	MIRc	SINE/MIR	(14)	254	1	933202
2337	12.1	0.0	2.5	chr12	105077264	105077578	(28197731)	C	AluSx	SINE/Alu	(5)	307	1	933789
11	34.9	1.4	1.4	chr12	105084548	105084617	(28190692)	+	(GCCCGCC)n	Simple_repeat	1	71	(0)	933802
2454	9.9	0.0	0.3	chr12	105229767	105230079	(28045230)	C	AluSq2	SINE/Alu	(1)	312	1	934021
15	5.6	0.0	0.0	chr12	105253868	105253886	(28021423)	+	(GT)n	Simple_repeat	1	19	(0)	934059
2132	12.4	0.3	1.6	chr12	108754620	108754933	(24520376)	+	AluSx	SINE/Alu	2	311	(1)	940919
2051	15.0	1.3	0.0	chr12	108823664	108823963	(24451346)	C	AluSz	SINE/Alu	(8)	304	1	941070
11	17.4	0.0	5.6	chr12	108824028	108824063	(24451246)	+	(CTCTTG)n	Simple_repeat	1	36	(0)	941071
1139	25.4	7.2	2.2	chr12	108989442	108989759	(24285550)	C	LTR16A1	LTR/ERVL	(121)	335	1	941480
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
239	35.3	8.4	1.4	chr12	109069279	109069488	(24205821)	+	L2c	LINE/L2	3112	3337	(50)	941681
544	30.7	9.6	4.5	chr12	109069528	109070326	(24204983)	C	L2a	LINE/L2	(0)	3426	2584	941682
919	18.2	0.0	0.7	chr12	109097223	109097376	(24177933)	C	AluJb	SINE/Alu	(30)	282	130	941736
563	23.4	2.0	0.7	chr12	109264514	109264659	(24010650)	+	MER5B	DNA/hAT-Charlie	30	177	(1)	942149
181	30.8	0.0	4.4	chr12	109264934	109265001	(24010308)	+	MIRc	SINE/MIR	90	154	(114)	942150
180	19.1	7.8	2.1	chr12	109304543	109304590	(23970719)	+	MamRTE1	LINE/RTE-BovB	2967	3017	(795)	942249
1936	18.0	1.0	0.6	chr12	109385283	109385593	(23889716)	C	AluJb	SINE/Alu	(0)	312	1	942419
12	10.9	0.0	8.6	chr12	109845494	109845528	(23429781)	+	(GGCGCA)n	Simple_repeat	1	35	(0)	943463
20	21.4	4.9	3.5	chr12	109911187	109911267	(23364042)	+	(AGCTGG)n	Simple_repeat	1	85	(0)	943624
2473	5.3	0.0	1.7	chr12	110402333	110402633	(22872676)	C	AluY	SINE/Alu	(15)	296	1	944648
344	29.2	10.8	6.9	chr12	110402634	110402664	(22872645)	C	L2b	LINE/L2	(565)	2854	2824	944645
2068	12.0	0.0	2.0	chr12	110402742	110403041	(22872268)	C	AluJo	SINE/Alu	(18)	294	1	944649
12	22.2	9.8	2.2	chr12	111368932	111369013	(21906296)	+	(CGGCGA)n	Simple_repeat	1	90	(0)	946920
14	13.1	0.0	0.0	chr12	111368992	111369017	(21906292)	+	(CGG)n	Simple_repeat	1	26	(0)	946921
13	17.8	5.3	0.0	chr12	111406139	111406176	(21869133)	+	(CGAG)n	Simple_repeat	1	40	(0)	947030
3600	5.9	2.0	0.0	chr12	111952472	111952915	(21322394)	+	MLT2A2	LTR/ERVL	1	453	(0)	948202
295	25.0	11.7	2.7	chr12	112170676	112170823	(21104486)	+	L1ME3G	LINE/L1	631	793	(131)	948619
36	0.0	0.0	0.0	chr12	112382328	112382360	(20892949)	+	(GCC)n	Simple_repeat	1	33	(0)	949065
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
2342	11.2	0.0	0.0	chr12	113333703	113334007	(19941302)	C	AluSz	SINE/Alu	(6)	306	2	951311
191	26.9	0.0	0.0	chr12	113334008	113334059	(19941250)	C	MIR	SINE/MIR	(148)	114	63	951310
21	24.2	0.0	6.8	chr12	113335143	113335230	(19940079)	+	(CCCGC)n	Simple_repeat	1	88	(0)	951315
565	33.9	13.4	3.1	chr12	113421065	113421572	(19853737)	+	L2b	LINE/L2	2807	3375	(0)	951558
27	29.7	1.2	0.0	chr12	114415331	114415412	(18859897)	+	(TG)n	Simple_repeat	1	83	(0)	953653
464	28.6	6.5	8.8	chr12	114733698	114733935	(18541374)	C	MIRc	SINE/MIR	(36)	232	1	954381
14	4.9	0.0	0.0	chr12	114734072	114734092	(18541217)	+	(ACCC)n	Simple_repeat	1	21	(0)	954382
760	8.6	0.0	5.7	chr12	115341359	115341481	(17933828)	C	L1PA7	LINE/L1	(0)	6154	6039	955806
332	24.8	6.7	10.1	chr12	116509037	116509175	(16766134)	+	MIRb	SINE/MIR	55	188	(80)	958245
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
447	20.4	21.0	0.0	chr12	116916738	116916884	(16358425)	C	MLT1H	LTR/ERVL-MaLR	(29)	520	335	959286
23	3.7	0.0	0.0	chr12	116916885	116916912	(16358397)	+	(TG)n	Simple_repeat	1	28	(0)	959287
17	5.0	0.0	0.0	chr12	116916912	116916932	(16358377)	+	(GA)n	Simple_repeat	1	21	(0)	959288
16	33.1	1.4	1.3	chr12	117190381	117190454	(16084855)	+	(CCG)n	Simple_repeat	1	75	(0)	959740
15	20.1	2.9	0.0	chr12	117190477	117190510	(16084799)	+	(CG)n	Simple_repeat	1	35	(0)	959741
587	32.7	7.9	2.8	chr12	118098475	118098763	(15176546)	C	L2b	LINE/L2	(34)	3341	3037	961833
727	11.0	0.0	5.9	chr12	118099327	118099444	(15175865)	C	AluJo	SINE/Alu	(201)	111	1	961838
14	25.6	1.7	3.3	chr12	118104038	118104096	(15171213)	+	(GCCGG)n	Simple_repeat	1	60	(0)	961850
2291	9.0	0.0	1.3	chr12	118131760	118132070	(15143239)	C	AluSx1	SINE/Alu	(5)	307	1	961933
1729	14.8	0.4	4.2	chr12	119859834	119860117	(13415192)	C	AluJr	SINE/Alu	(39)	273	1	965635
292	30.8	3.6	2.9	chr12	119860221	119860357	(13414952)	+	MamRTE1	LINE/RTE-BovB	125	262	(3550)	965636
1023	24.7	3.1	7.1	chr12	119869694	119870029	(13405280)	+	MER102a	DNA/hAT-Charlie	6	327	(3)	965661
41	25.4	2.0	3.3	chr12	120265740	120265888	(13009421)	+	(CGCCCG)n	Simple_repeat	1	152	(0)	966551
236	17.7	9.0	4.1	chr12	120430689	120430762	(12844547)	C	L2a	LINE/L2	(15)	3372	3277	967056
293	30.0	3.0	2.6	chr12	120489027	120489131	(12786178)	+	L2b	LINE/L2	3290	3385	(2)	967203
474	15.2	0.0	6.1	chr12	120489140	120489237	(12786072)	+	L2a	LINE/L2	2265	2356	(1063)	967204
250	29.3	2.4	1.6	chr12	120489243	120489367	(12785942)	+	L2-1_AMi	LINE/L2	420	545	(690)	967205
226	24.5	0.0	0.0	chr12	120495928	120495980	(12779329)	+	LTR71B	LTR/ERV1	309	361	(249)	967223
293	27.5	18.0	0.0	chr12	120583689	120583779	(12691530)	C	MIRb	SINE/MIR	(117)	151	41	967435
257	25.8	9.1	6.2	chr12	120584909	120585036	(12690273)	C	MIRb	SINE/MIR	(111)	157	26	967439
299	32.3	7.5	1.6	chr12	121628394	121628519	(11646790)	+	MIRb	SINE/MIR	19	152	(116)	969871
1592	18.2	0.7	3.7	chr12	121653810	121654106	(11621203)	C	L1MB5	LINE/L1	(0)	6174	5887	969948
12	24.0	2.6	0.0	chr12	121654229	121654267	(11621042)	+	G-rich	Low_complexity	1	40	(0)	969949
569	22.1	14.1	0.0	chr12	121663912	121664069	(11611240)	+	MLT1K	LTR/ERVL-MaLR	71	254	(341)	969981
375	23.0	28.2	2.8	chr12	121664113	121664293	(11611016)	+	MLT1K	LTR/ERVL-MaLR	368	594	(1)	969981
1350	24.3	6.5	0.0	chr12	121740861	121741177	(11534132)	C	MER58B	DNA/hAT-Charlie	(2)	339	1	970226
2106	10.4	0.0	2.4	chr12	121783766	121783903	(11491406)	C	AluSx1	SINE/Alu	(177)	135	1	970324
410	28.1	5.7	2.7	chr12	121783904	121784139	(11491170)	+	L2b	LINE/L2	2889	3128	(259)	970323
2050	17.6	2.2	0.6	chr12	121903126	121903484	(11371825)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	970636
2566	4.8	0.0	1.9	chr12	122644603	122644913	(10630396)	C	AluY	SINE/Alu	(6)	305	1	972325
5085	10.1	5.6	3.3	chr12	122644914	122645136	(10630173)	C	LTR1A2	LTR/ERV1	(610)	227	1	972324
645	30.0	15.6	8.2	chr12	122830655	122831069	(10444240)	C	L2c	LINE/L2	(14)	3361	2911	972796
16	6.8	6.5	0.0	chr12	122835081	122835111	(10440198)	+	(TCCCCC)n	Simple_repeat	1	33	(0)	972808
572	25.8	0.7	1.2	chr12	122974375	122974556	(10300753)	+	MIR	SINE/MIR	29	204	(26)	973092
2142	14.3	0.0	0.0	chr12	123184810	123185103	(10090206)	C	AluSz6	SINE/Alu	(18)	294	1	973479
434	27.5	10.2	10.6	chr12	123185104	123185333	(10089976)	+	HAL1	LINE/L1	823	1078	(1429)	973477
11012	9.0	3.9	0.6	chr12	123249828	123251861	(10023448)	C	L1PBa1	LINE/L1	(4515)	2348	252	973619
17	24.8	4.8	0.0	chr12	123972426	123972436	(9302873)	+	(CCCGG)n	Simple_repeat	1	62	(0)	975247
13	24.5	4.2	0.0	chr12	123972437	123972484	(9302825)	+	(CCGCCG)n	Simple_repeat	1	50	(0)	975248
19	18.7	6.6	3.4	chr12	123972586	123972677	(9302632)	+	G-rich	Low_complexity	1	94	(0)	975249
2197	13.4	0.3	0.6	chr12	124367621	124367933	(8907376)	C	AluSz	SINE/Alu	(0)	312	1	975953
204	31.7	1.6	0.0	chr12	124368093	124368152	(8907157)	+	MIR	SINE/MIR	89	149	(113)	975954
1694	21.5	7.0	2.9	chr12	124395886	124396364	(8878945)	+	L1MB5	LINE/L1	5673	6172	(2)	975996
12	13.1	2.7	5.3	chr12	124396969	124397005	(8878304)	+	G-rich	Low_complexity	1	38	(0)	975997
11	21.3	4.4	2.1	chr12	124423276	124423320	(8851989)	+	(CCCAGGC)n	Simple_repeat	1	47	(0)	976033
17	22.2	7.3	2.3	chr12	124480813	124480894	(8794415)	+	G-rich	Low_complexity	1	88	(0)	976130
17	13.1	0.0	0.0	chr12	124518202	124518227	(8757082)	+	(A)n	Simple_repeat	1	26	(0)	976196
283	33.3	1.1	0.0	chr12	124683162	124683248	(8592061)	+	L2a	LINE/L2	3334	3421	(5)	976569
16	19.5	5.3	3.3	chr12	124916598	124916654	(8358655)	+	GA-rich	Low_complexity	1	60	(0)	977140
679	1.4	0.0	0.0	chr12	124927842	124927915	(8347394)	C	tRNA-Phe-TTY	tRNA	(2)	74	1	977166
331	29.4	17.5	6.5	chr12	124940369	124940722	(8334587)	C	L2a	LINE/L2	(18)	3357	2960	977203
388	31.2	6.9	1.4	chr12	124940734	124940951	(8334358)	C	L2a	LINE/L2	(560)	2859	2629	977203
300	34.8	5.4	7.1	chr12	124940953	124941164	(8334145)	C	L1MC5	LINE/L1	(2137)	7167	6963	977204
889	17.7	2.2	2.2	chr12	125007968	125008152	(8267157)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	977368
2649	4.5	0.3	0.6	chr12	125008300	125008610	(8266699)	C	AluY	SINE/Alu	(1)	310	1	977369
307	37.8	1.4	0.0	chr12	125125258	125125400	(8149909)	C	MIRb	SINE/MIR	(59)	209	65	977610
756	25.4	4.3	0.0	chr12	125125451	125125651	(8149658)	C	Tigger17c	DNA/TcMar-Tigger	(978)	210	1	977611
23	10.5	3.6	3.5	chr12	125186267	125186314	(8088995)	+	(GCCCCG)n	Simple_repeat	1	48	(0)	977731
44	2.1	2.1	0.0	chr12	125186315	125186362	(8088947)	+	(CTC)n	Simple_repeat	1	49	(0)	977732
21	9.4	0.0	0.0	chr12	125186369	125186402	(8088907)	+	(CGCT)n	Simple_repeat	1	34	(0)	977733
36	24.0	2.7	1.8	chr12	125186406	125186516	(8088793)	+	(GGC)n	Simple_repeat	1	114	(0)	977734
39	21.6	3.4	5.2	chr12	128823828	128823975	(4451334)	+	(GCC)n	Simple_repeat	1	153	(0)	983925
347	31.6	10.6	6.6	chr12	130832718	130833140	(2442169)	+	L2b	LINE/L2	2913	3354	(21)	987282
440	32.8	6.5	1.1	chr12	131620093	131620268	(1655041)	+	MIR	SINE/MIR	23	208	(54)	988349
1043	19.2	12.1	0.4	chr12	131620373	131620612	(1654697)	C	ORSL	DNA/hAT-Tip100	(0)	275	4	988350
1898	25.9	6.5	5.0	chr12	131819015	131819561	(1455748)	+	MER65-int	LTR/ERV1	4239	4809	(62)	988627
1720	17.1	2.7	0.3	chr12	131882987	131883279	(1392030)	+	AluJb	SINE/Alu	2	301	(11)	988754
2207	8.3	1.3	3.2	chr12	131928376	131928687	(1346622)	+	AluSc	SINE/Alu	1	306	(3)	988828
307	16.8	0.0	3.8	chr12	131928703	131928791	(1346518)	+	AluJb	SINE/Alu	104	188	(114)	988829
316	32.2	8.0	1.3	chr12	131930331	131930481	(1344828)	+	MIR	SINE/MIR	60	221	(41)	988832
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
423	23.6	4.6	0.7	chr12	132158772	132158916	(1116393)	+	MLT1C	LTR/ERVL-MaLR	17	167	(300)	989143
304	24.9	7.3	10.0	chr12	132158981	132159190	(1116119)	+	MLT1C	LTR/ERVL-MaLR	301	504	(1)	989143
309	26.5	6.9	3.0	chr12	132187206	132187372	(1087937)	+	MLT1E2-int	LTR/ERVL-MaLR	785	958	(451)	989186
443	27.8	9.2	7.7	chr12	132194122	132194470	(1080839)	+	MamGypLTR3a	LTR/Gypsy	555	862	(119)	989198
309	29.7	5.6	7.1	chr12	132238620	132238746	(1036563)	+	MIRc	SINE/MIR	38	162	(106)	989246
581	30.8	9.9	0.3	chr12	132238788	132239087	(1036222)	C	MER113	DNA/hAT-Charlie	(68)	453	122	989247
326	25.7	10.3	0.0	chr12	132286580	132286719	(988590)	+	L1MC1	LINE/L1	5927	6082	(251)	989297
1775	15.8	3.5	0.0	chr12	132286726	132286997	(988312)	C	AluSz	SINE/Alu	(24)	288	7	989298
269	32.9	5.0	3.8	chr12	132289116	132289434	(985875)	C	HAL1ME	LINE/L1	(1078)	1387	1065	989300
442	14.4	6.2	0.0	chr12	132289435	132289524	(985785)	+	MLT1E2	LTR/ERVL-MaLR	1	96	(531)	989301
30	18.0	4.1	4.0	chr12	132329739	132329826	(945483)	+	G-rich	Low_complexity	1	88	(0)	989335
269	31.0	2.5	6.6	chr12	132387459	132387624	(887685)	+	MLT1C	LTR/ERVL-MaLR	52	210	(257)	989397
425	24.1	5.4	6.6	chr12	132423669	132423819	(851490)	+	MIRc	SINE/MIR	8	156	(112)	989440
545	29.7	19.8	1.7	chr12	132426881	132427291	(848018)	C	L2a	LINE/L2	(1)	3425	2922	989442
12	26.3	0.0	5.5	chr12	132427525	132427579	(847730)	+	G-rich	Low_complexity	1	55	(0)	989443
206	32.4	2.9	0.0	chr12	132427583	132427650	(847659)	C	L2a	LINE/L2	(562)	2857	2788	989442
1159	26.7	8.8	3.9	chr12	132427679	132428193	(847116)	C	MLT1F2	LTR/ERVL-MaLR	(10)	550	8	989444
2655	4.8	0.0	0.3	chr12	132430597	132430907	(844402)	+	AluY	SINE/Alu	1	310	(1)	989446
1565	19.4	5.8	1.9	chr12	132446333	132446699	(828610)	+	LTR8	LTR/ERV1	310	691	(0)	989467
13	28.4	3.3	1.6	chr12	132687508	132687568	(587741)	+	(GGCGC)n	Simple_repeat	1	63	(0)	989772
842	14.4	0.0	1.5	chr12	132827789	132827920	(447389)	+	FLAM_C	SINE/Alu	4	133	(10)	989999
27	0.0	0.0	0.0	chr12	132828740	132828765	(446544)	+	(GCGGGA)n	Simple_repeat	1	26	(0)	990001
709	22.2	0.7	0.0	chr12	132858782	132858916	(416393)	+	AluSx3	SINE/Alu	120	255	(56)	990046
2484	15.4	0.5	3.9	chr13	19910239	19910518	(94453810)	+	ERVL-B4-int	LTR/ERVL	1041	1317	(4397)	993370
631	13.6	4.6	0.0	chr13	19910519	19910621	(94453707)	C	AluSx3	SINE/Alu	(0)	311	204	993372
19254	15.9	4.9	3.3	chr13	19910644	19911044	(94453284)	+	ERVL-B4-int	LTR/ERVL	1306	1746	(3968)	993370
16	15.3	2.0	6.0	chr13	20127770	20127818	(94236510)	+	(TGAGG)n	Simple_repeat	1	50	(0)	993808
13	22.4	0.0	4.4	chr13	20161087	20161131	(94203197)	+	(CGCCG)n	Simple_repeat	1	45	(0)	993859
1927	13.4	7.0	0.0	chr13	20166033	20166322	(94198006)	+	AluJb	SINE/Alu	1	312	(0)	993864
115	4.9	0.0	0.0	chr13	20362772	20362899	(94001429)	+	(GGGCAGGCGT)n	Simple_repeat	1	128	(0)	994146
67	28.0	3.0	2.2	chr13	20704301	20704562	(93659766)	+	G-rich	Low_complexity	1	270	(0)	994732
2542	9.5	3.3	25.3	chr13	20803795	20804469	(93559859)	+	MER41C	LTR/ERV1	1	521	(0)	994886
1293	14.5	3.9	15.1	chr13	21134246	21134352	(93229976)	+	AluJr	SINE/Alu	1	76	(236)	995586
1402	11.8	0.0	0.0	chr13	21134353	21134538	(93229790)	C	AluY	SINE/Alu	(125)	186	1	995587
679	19.9	5.5	0.0	chr13	21637323	21637493	(92726835)	+	MER5A	DNA/hAT-Charlie	1	181	(8)	996445
1207	24.9	4.5	3.8	chr13	21663136	21663528	(92700800)	C	MSTB2	LTR/ERVL-MaLR	(0)	396	1	996486
2238	10.2	0.7	0.7	chr13	24160241	24160543	(90203785)	C	AluSx1	SINE/Alu	(9)	303	1	999896
13	29.7	0.0	7.8	chr13	24160652	24160741	(90203587)	+	G-rich	Low_complexity	1	90	(0)	999897
1465	17.2	3.8	4.8	chr13	24447925	24448215	(89916113)	+	AluJb	SINE/Alu	1	288	(24)	1000302
448	25.8	13.6	3.7	chr13	24628172	24628388	(89735940)	+	MLT1J1	LTR/ERVL-MaLR	192	433	(11)	1000547
19	31.8	2.4	0.0	chr13	25468741	25468746	(88895582)	+	(GCGGCG)n	Simple_repeat	1	12	(72)	1001904
20	8.1	0.0	8.5	chr13	25468747	25468793	(88895535)	+	G-rich	Low_complexity	1	47	(0)	1001905
19	31.8	2.4	0.0	chr13	25468794	25468822	(88895506)	+	(GCGGCG)n	Simple_repeat	13	84	(0)	1001904
4218	10.6	11.8	3.5	chr13	26785434	26786198	(87578130)	C	LTR1A2	LTR/ERV1	(0)	837	1	1003795
21	20.9	4.9	8.1	chr13	27171732	27171873	(87192455)	+	(CGGCCCC)n	Simple_repeat	1	149	(0)	1004433
14	26.4	3.7	0.0	chr13	27621849	27621902	(86742426)	+	(TCCT)n	Simple_repeat	1	56	(0)	1005252
2158	11.7	0.0	2.0	chr13	27788331	27788344	(86575984)	+	AluSz	SINE/Alu	285	294	(18)	1005512
2577	9.2	0.0	0.0	chr13	27856956	27857258	(86507070)	+	AluSg4	SINE/Alu	1	303	(7)	1005630
4567	10.3	6.0	8.9	chr13	27857259	27857419	(86506909)	C	LTR1A2	LTR/ERV1	(691)	146	7	1005629
426	31.7	11.0	1.6	chr13	28658712	28658900	(85705428)	+	MIRc	SINE/MIR	58	266	(2)	1007119
1636	29.8	3.1	5.7	chr13	28709907	28710608	(85653720)	C	MER115	DNA/hAT-Tip100	(0)	693	11	1007198
666	0.0	0.0	0.0	chr13	30673964	30674037	(83690291)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	1010174
263	22.2	7.8	14.2	chr13	31096585	31096784	(83267544)	C	Tigger12	DNA/TcMar-Tigger	(387)	347	157	1010870
3254	18.1	7.3	2.2	chr13	31096874	31097562	(83266766)	C	LTR8A	LTR/ERV1	(0)	727	1	1010871
1935	7.9	0.8	0.4	chr13	31385545	31385798	(82978530)	C	LTR1A2	LTR/ERV1	(582)	255	1	1011225
18	0.0	0.0	0.0	chr13	36131374	36131396	(78232932)	+	(GGC)n	Simple_repeat	1	23	(0)	1018106
17	10.5	3.2	0.0	chr13	36131433	36131463	(78232865)	+	(CCT)n	Simple_repeat	1	32	(0)	1018107
1799	19.2	7.2	1.9	chr13	36789011	36789381	(77574947)	C	MSTD	LTR/ERVL-MaLR	(0)	396	5	1019054
458	30.3	10.3	4.4	chr13	36789384	36789656	(77574672)	+	LTR79	LTR/ERVL	92	382	(145)	1019055
3078	18.6	3.3	3.0	chr13	37211559	37212096	(77152232)	C	LTR9D	LTR/ERV1	(93)	552	1	1019714
11	17.8	0.0	2.9	chr13	40664790	40664807	(73699521)	+	(CGCCCC)n	Simple_repeat	1	17	(0)	1024465
30	0.0	0.0	0.0	chr13	40664808	40664835	(73699493)	+	(CGCCAC)n	Simple_repeat	1	28	(0)	1024466
11	17.8	0.0	2.9	chr13	40664836	40664851	(73699477)	+	(CGCCCC)n	Simple_repeat	6	21	(0)	1024467
14	17.6	2.5	2.4	chr13	41457396	41457435	(72906893)	+	G-rich	Low_complexity	1	41	(0)	1025878
18	10.0	4.1	5.9	chr13	41457466	41457515	(72906813)	+	(GCCCCG)n	Simple_repeat	1	49	(0)	1025879
2550	20.5	0.8	0.6	chr13	41500098	41500607	(72863721)	C	L1MB7	LINE/L1	(61)	6123	5613	1025932
247	30.0	9.1	1.1	chr13	41500761	41500851	(72863477)	+	L2b	LINE/L2	3054	3152	(223)	1025933
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
3898	23.4	5.6	8.0	chr13	44591124	44592618	(69771710)	+	MER52A	LTR/ERV1	1	1196	(559)	1030545
326	20.6	0.0	0.0	chr13	44917926	44917998	(69446330)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1031204
257	20.5	10.3	0.0	chr13	44918161	44918238	(69446090)	+	L2	LINE/L2	2235	2321	(1098)	1031205
2124	13.7	0.3	1.9	chr13	45180882	45181196	(69183132)	+	AluJb	SINE/Alu	3	312	(0)	1031749
1963	14.6	0.7	0.0	chr13	45361367	45361677	(69002651)	C	AluSp	SINE/Alu	(0)	313	1	1032144
1540	8.5	4.6	1.9	chr13	45361700	45361911	(69002417)	C	AluYk3	SINE/Alu	(11)	300	83	1032145
1267	30.8	10.7	0.8	chr13	45361912	45362517	(69001811)	+	L2a	LINE/L2	2106	2778	(641)	1032146
2217	11.9	12.4	2.5	chr13	48001786	48002189	(66362139)	C	LTR7	LTR/ERV1	(0)	450	1	1036092
12	30.4	1.7	1.7	chr13	50909720	50909777	(63454551)	+	(GCGCC)n	Simple_repeat	1	59	(0)	1040827
14	16.5	5.9	3.7	chr13	52406197	52406247	(61958081)	+	(GGCG)n	Simple_repeat	1	54	(0)	1043056
13	22.1	4.1	2.0	chr13	52652663	52652711	(61711617)	+	G-rich	Low_complexity	1	51	(0)	1043445
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
852	27.4	8.8	7.9	chr13	74047842	74048348	(40315980)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	1	1071419
320	26.4	9.1	2.1	chr13	74110038	74110180	(40254148)	C	MER102b	DNA/hAT-Charlie	(161)	180	27	1071517
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
25	26.4	3.1	2.0	chr13	74134473	74134570	(40229758)	+	(CCCGC)n	Simple_repeat	1	101	(0)	1071558
1780	10.8	11.6	0.0	chr13	77025445	77025712	(37338616)	+	AluJb	SINE/Alu	5	307	(5)	1075599
28	26.9	2.1	1.0	chr13	77026662	77026756	(37337572)	+	(CCGCC)n	Simple_repeat	1	97	(0)	1075600
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
11859	10.2	0.9	0.3	chr13	95490436	95493116	(18871212)	C	L1PB1	LINE/L1	(3166)	4975	1612	1100217
240	23.2	0.0	0.0	chr13	97227480	97227535	(17136793)	C	MIRc	SINE/MIR	(17)	251	196	1102686
2094	9.2	0.7	5.2	chr13	98246944	98247249	(16117079)	+	AluSx	SINE/Alu	1	292	(20)	1104364
4815	8.5	3.0	0.0	chr13	98485110	98485779	(15878549)	C	LTR8	LTR/ERV1	(0)	691	1	1104710
32	22.2	1.8	4.5	chr13	99606510	99606661	(14757667)	+	G-rich	Low_complexity	1	147	(0)	1106537
27	26.4	2.3	0.0	chr13	99971151	99971236	(14393092)	+	GA-rich	Low_complexity	1	88	(0)	1107128
212	26.5	1.0	12.5	chr13	100490773	100490884	(13873444)	C	MIR	SINE/MIR	(64)	204	106	1108062
777	25.0	0.6	0.0	chr13	100490923	100491102	(13873226)	C	MER5A	DNA/hAT-Charlie	(8)	181	1	1108063
16	10.7	0.0	3.1	chr13	102596926	102596957	(11767371)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1111016
12	22.4	3.1	6.1	chr13	109786754	109786817	(4577511)	+	(CGCCCC)n	Simple_repeat	1	66	(0)	1120506
12	24.2	2.6	0.0	chr13	109786820	109786858	(4577470)	+	G-rich	Low_complexity	1	40	(0)	1120507
23	18.2	4.0	3.9	chr13	109787005	109787078	(4577250)	+	G-rich	Low_complexity	1	77	(0)	1120508
31	17.3	4.0	4.8	chr13	110561742	110561853	(3802475)	+	(CGCCCC)n	Simple_repeat	1	111	(0)	1121399
38	19.0	3.8	5.1	chr13	112894203	112894334	(1469994)	+	(CGCCC)n	Simple_repeat	1	137	(0)	1124019
1371	18.9	6.5	6.3	chr13	113187336	113187925	(1176403)	C	L1M4	LINE/L1	(536)	5642	5060	1124301
498	15.9	15.9	1.5	chr13	113453843	113453976	(910352)	C	L1MB5	LINE/L1	(182)	5992	5836	1124709
1441	22.4	1.8	0.7	chr13	113469410	113469686	(894642)	+	AluJr	SINE/Alu	13	292	(20)	1124732
1086	16.1	0.0	0.0	chr13	113469693	113469853	(894475)	+	AluJr	SINE/Alu	137	297	(15)	1124733
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
20	21.2	3.5	5.7	chr14	21070606	21070690	(85973028)	+	(TCC)n	Simple_repeat	1	88	(0)	1129044
12	8.1	3.6	3.5	chr14	21070690	21070717	(85973001)	+	(CTGTC)n	Simple_repeat	1	29	(0)	1129045
6733	20.8	9.8	3.7	chr14	21191934	21193578	(85850140)	+	MER52A	LTR/ERV1	1	1755	(0)	1129252
17	4.0	0.0	3.6	chr14	21442837	21442864	(85600854)	+	(AGAA)n	Simple_repeat	1	28	(0)	1129755
185	25.0	0.0	0.0	chr14	22589858	22589901	(84453817)	C	MIR	SINE/MIR	(8)	254	211	1131370
20	14.0	0.0	0.0	chr14	22598341	22598372	(84445346)	+	(CT)n	Simple_repeat	1	32	(0)	1131386
3564	14.6	18.2	6.9	chr14	22626287	22627080	(84416638)	+	MER4D	LTR/ERV1	1	903	(0)	1131426
971	26.8	4.5	11.6	chr14	22664261	22664537	(84379181)	+	MLT1G3	LTR/ERVL-MaLR	1	281	(314)	1131500
1242	5.7	0.0	0.0	chr14	22678165	22678323	(84365395)	C	L1M1	LINE/L1	(5240)	2325	2167	1131514
1275	13.0	10.8	1.2	chr14	22678324	22678573	(84365145)	+	THE1D	LTR/ERVL-MaLR	1	277	(104)	1131515
444	22.7	15.1	3.5	chr14	22871054	22871222	(84172496)	C	MIRb	SINE/MIR	(0)	268	77	1131876
208	34.8	2.6	8.2	chr14	22871232	22871353	(84172365)	C	L2c	LINE/L2	(0)	3387	3273	1131877
13	19.4	0.0	2.7	chr14	22982543	22982579	(84061139)	+	(CGCCCCC)n	Simple_repeat	1	37	(0)	1132084
5286	8.5	2.8	1.8	chr14	23107699	23108500	(83935218)	C	SVA_A	Retroposon/SVA	(5)	1382	572	1132297
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
16	22.2	0.0	0.0	chr14	24036320	24036361	(83007357)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	1133673
23	26.1	1.1	3.4	chr14	24135929	24136015	(82907703)	+	(GGAGGCG)n	Simple_repeat	1	88	(0)	1133803
2096	13.6	0.7	0.3	chr14	24243096	24243405	(82800313)	+	AluSx1	SINE/Alu	1	311	(1)	1133959
12	24.1	4.8	3.1	chr14	24314673	24314734	(82728984)	+	(CCTCTCT)n	Simple_repeat	1	65	(0)	1134061
14	31.7	1.6	0.0	chr14	24399119	24399180	(82644538)	+	G-rich	Low_complexity	1	63	(0)	1134216
12	20.4	0.0	6.7	chr14	24442282	24442326	(82601392)	+	(GCCCC)n	Simple_repeat	1	45	(0)	1134266
2160	10.5	0.4	0.4	chr14	31137153	31137429	(75906289)	C	AluSx	SINE/Alu	(35)	277	1	1142985
1635	17.8	1.9	5.6	chr14	31137446	31137766	(75905952)	+	AluJb	SINE/Alu	1	309	(3)	1142986
200	36.1	3.6	2.2	chr14	34462625	34462760	(72580958)	C	L2a	LINE/L2	(12)	3414	3277	1147845
1941	15.1	0.7	0.7	chr14	34520511	34520801	(72522917)	C	AluSz6	SINE/Alu	(21)	291	1	1147988
2136	23.2	5.4	7.1	chr14	34520817	34521074	(72522644)	C	L1M3f	LINE/L1	(4732)	2833	2577	1147981
16	19.5	0.0	7.3	chr14	34539791	34539845	(72503873)	+	(GGCGG)n	Simple_repeat	1	55	(0)	1148042
5085	10.1	4.0	4.5	chr14	34797696	34798554	(72245164)	+	L1P2	LINE/L1	1	854	(5330)	1148645
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
505	19.8	3.1	4.5	chr14	35061177	35061308	(71982410)	C	L1M4b	LINE/L1	(6047)	820	691	1149260
558	26.9	1.5	4.3	chr14	35061327	35061466	(71982252)	C	L1M4b	LINE/L1	(6165)	702	567	1149260
17	14.3	4.0	3.9	chr14	35404653	35404702	(71639016)	+	G-rich	Low_complexity	1	52	(0)	1149965
13	8.5	0.0	3.7	chr14	35826847	35826873	(71216845)	+	(CGGGG)n	Simple_repeat	1	27	(0)	1150696
2467	14.6	3.5	0.0	chr14	36427436	36427845	(70615873)	C	MSTB	LTR/ERVL-MaLR	(0)	426	2	1151595
1747	29.8	7.9	2.0	chr14	36427846	36428438	(70615280)	C	L2a	LINE/L2	(395)	3024	2388	1151593
11	13.2	5.7	2.7	chr14	36582390	36582424	(70461294)	+	(GGCAGG)n	Simple_repeat	1	37	(0)	1151797
875	14.7	2.1	1.4	chr14	37874954	37875098	(69168620)	+	MER5A1	DNA/hAT-Charlie	21	166	(0)	1153521
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
2190	11.8	0.7	0.7	chr14	50388819	50389123	(56654595)	+	AluSg	SINE/Alu	2	306	(4)	1169893
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
7106	6.2	4.9	0.5	chr14	50956282	50957278	(56086440)	C	SVA_B	Retroposon/SVA	(339)	1044	2	1170746
1674	20.4	10.0	2.7	chr14	51773441	51774477	(55269241)	+	SATR1	Satellite	1	1112	(4)	1171953
293	26.2	0.0	0.0	chr14	52829994	52830054	(54213664)	C	MIR	SINE/MIR	(200)	62	2	1173615
9955	12.4	2.4	7.7	chr14	53216383	53218049	(53825669)	C	LTR12C	LTR/ERV1	(0)	1579	3	1174241
740	29.7	6.9	7.7	chr14	54441573	54442066	(52601652)	C	L2c	LINE/L2	(1)	3386	2901	1175931
12	18.3	6.7	2.1	chr14	54566171	54566215	(52477503)	+	(GCACC)n	Simple_repeat	1	48	(0)	1176154
1301	16.4	1.8	1.3	chr14	55191897	55192122	(51851596)	C	AluJr	SINE/Alu	(1)	311	85	1177223
13	8.5	0.0	3.7	chr14	55580190	55580216	(51463502)	+	(CCGCC)n	Simple_repeat	1	27	(0)	1177968
29	0.0	0.0	0.0	chr14	55580254	55580280	(51463438)	+	(GCG)n	Simple_repeat	1	27	(0)	1177969
2068	12.1	3.6	0.7	chr14	55975990	55976287	(51067431)	C	AluSq	SINE/Alu	(6)	307	1	1178616
13	21.4	4.7	0.0	chr14	58152310	58152352	(48891366)	+	(GCCCAC)n	Simple_repeat	1	45	(0)	1181703
6578	19.5	7.6	2.5	chr14	58414828	58415933	(48627785)	+	L1MDa	LINE/L1	565	1733	(4900)	1182206
16	16.5	0.0	0.0	chr14	59358943	59358976	(47684742)	+	(CCACC)n	Simple_repeat	1	34	(0)	1183610
23	25.5	4.3	2.1	chr14	63728076	63728168	(43315550)	+	(GCCGC)n	Simple_repeat	1	97	(0)	1189892
15	25.1	4.9	0.0	chr14	63852902	63852962	(43190756)	+	G-rich	Low_complexity	1	64	(0)	1190225
71	0.0	0.0	0.0	chr14	64704385	64704447	(42339271)	+	(CTCCCTCG)n	Simple_repeat	1	63	(0)	1191799
3134	15.8	9.8	13.8	chr14	64755608	64756287	(42287431)	+	LTR60B	LTR/ERV1	1	653	(112)	1191868
2294	10.9	0.7	0.0	chr14	64791290	64791591	(42252127)	+	AluSz6	SINE/Alu	5	308	(4)	1191907
12	11.9	0.0	6.5	chr14	67471743	67471773	(39571945)	+	(CACCA)n	Simple_repeat	1	31	(0)	1196128
19	9.2	2.9	0.0	chr14	67572388	67572422	(39471296)	+	(GCTGGGG)n	Simple_repeat	1	36	(0)	1196337
271	28.6	4.3	0.7	chr14	68360170	68360324	(38683394)	+	L2c	LINE/L2	2947	3107	(280)	1197589
222	22.1	4.1	3.9	chr14	68898874	68899657	(38144061)	+	(CCCACAC)n	Simple_repeat	1	816	(0)	1198448
2435	6.1	0.7	0.0	chr14	73005924	73006218	(34037500)	C	AluY	SINE/Alu	(14)	297	1	1205266
2127	12.2	0.0	0.0	chr14	73006293	73006578	(34037140)	+	AluSz	SINE/Alu	1	286	(26)	1205267
16	11.3	5.0	2.4	chr14	73741081	73741120	(33302598)	+	(CTGCCC)n	Simple_repeat	1	42	(0)	1206981
13	27.3	1.6	3.2	chr14	75603027	75603087	(31440631)	+	(TTCTCCC)n	Simple_repeat	1	62	(0)	1210771
3787	18.4	7.2	4.4	chr14	75603125	75603904	(31439814)	+	LTR1E	LTR/ERV1	1	804	(0)	1210772
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
455	23.1	2.6	5.8	chr14	77237067	77237222	(29806496)	C	MamRep38	DNA/hAT	(53)	242	92	1213872
10085	5.2	0.4	10.3	chr14	77746891	77748425	(29295293)	+	SVA_B	Retroposon/SVA	1	1382	(1)	1214857
13	23.3	4.4	0.0	chr14	88554937	88554981	(18488737)	+	(GGAC)n	Simple_repeat	1	47	(0)	1230608
764	12.6	2.2	2.9	chr14	89205204	89205342	(17838376)	+	MLT1A0	LTR/ERVL-MaLR	1	138	(227)	1231674
1988	13.2	7.0	0.5	chr14	89205333	89205948	(17837770)	+	LTR1A1	LTR/ERV1	19	799	(0)	1231675
24	15.7	0.0	6.2	chr14	89417243	89417319	(17626399)	+	GA-rich	Low_complexity	1	72	(0)	1232039
32	0.0	4.8	2.3	chr14	90061710	90061751	(16981967)	+	(CGCCC)n	Simple_repeat	1	44	(0)	1233173
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
518	14.3	0.0	0.0	chr14	90517821	90517890	(16525828)	C	AluJb	SINE/Alu	(14)	298	229	1234082
27	14.9	1.6	3.1	chr14	90828278	90828340	(16215378)	+	G-rich	Low_complexity	1	64	(0)	1234548
1651	15.6	8.8	5.9	chr14	91009113	91009420	(16034298)	+	MLT1A0	LTR/ERVL-MaLR	1	323	(42)	1234844
12	24.2	4.5	0.0	chr14	91115320	91115363	(15928355)	+	(GCAGG)n	Simple_repeat	1	46	(0)	1235086
1886	15.9	4.6	0.0	chr14	91115421	91115709	(15928009)	C	AluSz	SINE/Alu	(9)	303	1	1235087
2446	10.3	5.7	19.0	chr14	91119633	91120159	(15923559)	+	MLT2A2	LTR/ERVL	1	453	(0)	1235098
232	27.9	17.2	1.1	chr14	91269227	91269411	(15774307)	C	L2c	LINE/L2	(1296)	2123	1903	1235428
403	23.7	6.6	0.0	chr14	91311454	91311567	(15732151)	+	MLT1J2	LTR/ERVL-MaLR	184	305	(143)	1235499
18	28.3	1.0	5.9	chr14	91510623	91510722	(15532996)	+	(CGGCCC)n	Simple_repeat	1	101	(0)	1235829
3982	15.1	12.2	0.3	chr14	91515714	91516435	(15527283)	+	LTR8B	LTR/ERV1	1	820	(0)	1235845
1266	20.4	13.4	2.7	chr14	91904513	91904845	(15138873)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1236506
432	25.7	8.6	5.7	chr14	92528340	92528496	(14515222)	+	MIR	SINE/MIR	80	241	(21)	1237710
1801	15.8	2.7	0.9	chr14	95255266	95255590	(11788128)	+	MER44A	DNA/TcMar-Tigger	1	331	(8)	1242678
1048	21.1	12.6	1.9	chr14	95255631	95255940	(11787778)	+	Tigger9b	DNA/TcMar-Tigger	275	622	(2)	1242679
44	0.0	0.0	0.0	chr14	95319304	95319341	(11724377)	+	(CA)n	Simple_repeat	1	38	(0)	1242775
291	35.0	8.2	0.2	chr14	95491216	95491398	(11552320)	C	MIR3	SINE/MIR	(14)	194	2	1243123
28	27.1	3.5	5.4	chr14	96038096	96038256	(11005462)	+	GA-rich	Low_complexity	1	157	(0)	1244134
24	14.0	2.1	0.0	chr14	96039280	96039295	(11004423)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1244138
15	20.0	0.0	0.0	chr14	96039296	96039324	(11004394)	+	(C)n	Simple_repeat	1	29	(0)	1244139
54	30.5	2.1	2.5	chr14	96391797	96392034	(10651684)	+	(GCCCC)n	Simple_repeat	1	243	(0)	1244787
1336	28.2	12.3	3.8	chr14	97156284	97157350	(9886368)	C	L2a	LINE/L2	(1)	3425	2244	1246204
210	17.6	7.5	0.0	chr14	99253539	99253617	(7790101)	C	MIRb	SINE/MIR	(125)	143	51	1249731
19	13.1	8.0	0.0	chr14	99523174	99523223	(7520495)	+	G-rich	Low_complexity	1	54	(0)	1250149
214	32.5	1.3	0.0	chr14	99581944	99582020	(7461698)	C	MIRb	SINE/MIR	(81)	187	110	1250227
615	29.7	14.1	2.4	chr14	99802137	99802840	(7240878)	C	L2	LINE/L2	(339)	3080	2281	1250655
517	22.9	8.8	3.0	chr14	99807390	99807623	(7236095)	C	LTR33	LTR/ERVL	(10)	505	257	1250663
13	17.8	6.5	2.0	chr14	99807647	99807692	(7236026)	+	(CCCTC)n	Simple_repeat	1	49	(0)	1250664
274	33.3	2.6	8.1	chr14	99807983	99808309	(7235409)	+	L2b	LINE/L2	3079	3382	(5)	1250665
505	30.5	7.6	3.0	chr14	99947167	99947467	(7096251)	C	LTR78	LTR/ERV1	(493)	811	496	1250877
871	31.9	7.8	3.2	chr14	100068002	100068726	(6974992)	C	L2b	LINE/L2	(49)	3326	2554	1251132
264	28.9	7.5	0.0	chr14	100214710	100214844	(6828874)	C	MIR3	SINE/MIR	(52)	156	11	1251448
427	29.8	11.8	2.6	chr14	100221769	100222210	(6821508)	C	L2c	LINE/L2	(97)	3290	2803	1251465
263	28.8	0.0	0.0	chr14	100290663	100290721	(6752997)	+	L2b	LINE/L2	3120	3178	(197)	1251602
188	21.1	6.6	1.7	chr14	100290943	100291000	(6752718)	C	MIRc	SINE/MIR	(126)	142	82	1251606
21	8.9	1.8	8.6	chr14	100306609	100306665	(6737053)	+	G-rich	Low_complexity	1	58	(0)	1251631
397	23.0	15.4	8.3	chr14	100375757	100375984	(6667734)	+	MIR	SINE/MIR	2	248	(14)	1251756
22	9.8	6.7	0.0	chr14	100550041	100550085	(6493633)	+	(GTGTGC)n	Simple_repeat	1	48	(0)	1252039
2188	21.4	20.3	0.7	chr14	100645427	100646041	(6397677)	C	LTR41	LTR/ERVL	(0)	768	2	1252207
13	18.9	0.0	0.0	chr14	101477120	101477149	(5566569)	+	(GGCAG)n	Simple_repeat	1	30	(0)	1253194
638	28.9	8.8	2.0	chr14	101848971	101849319	(5194399)	C	L1ME3B	LINE/L1	(285)	5957	5583	1253747
737	22.0	4.1	1.2	chr14	101849396	101849689	(5194029)	C	L1ME3B	LINE/L1	(738)	5435	5129	1253747
13	7.2	3.0	5.9	chr14	101964492	101964524	(5079194)	+	G-rich	Low_complexity	1	34	(0)	1253966
17	13.0	2.9	0.0	chr14	102063482	102063515	(4980203)	+	(ATA)n	Simple_repeat	1	35	(0)	1254141
12	22.6	5.7	1.8	chr14	102087264	102087316	(4956402)	+	(CGCGCGC)n	Simple_repeat	1	56	(0)	1254194
12	18.4	5.4	0.0	chr14	102087355	102087391	(4956327)	+	(CCGCCCT)n	Simple_repeat	1	39	(0)	1254195
231	34.1	9.0	1.5	chr14	102508440	102508573	(4535145)	+	MIR3	SINE/MIR	11	155	(53)	1255053
306	28.5	11.4	0.0	chr14	102508693	102508888	(4534830)	C	MIR1_Amn	SINE/MIR	(22)	246	19	1255054
756	17.3	0.8	1.6	chr14	102524471	102524597	(4519121)	C	AluJr	SINE/Alu	(186)	126	1	1255086
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
21	3.5	0.0	0.0	chr14	102527704	102527732	(4515986)	+	(GGGCA)n	Simple_repeat	1	29	(0)	1255096
184	33.3	2.7	0.0	chr14	102552129	102552200	(4491518)	+	MIRb	SINE/MIR	100	173	(95)	1255156
11	25.5	0.0	6.9	chr14	102592248	102592305	(4451413)	+	G-rich	Low_complexity	1	58	(0)	1255258
1669	17.1	5.1	0.7	chr14	102879278	102879558	(4164160)	C	AluJo	SINE/Alu	(18)	294	1	1255853
22	15.4	0.0	0.0	chr14	102947856	102947898	(4095820)	+	(GCCCT)n	Simple_repeat	1	43	(0)	1255939
220	27.2	17.9	2.3	chr14	103028292	103028467	(4015251)	+	MIRb	SINE/MIR	14	231	(37)	1256060
194	27.9	4.7	0.0	chr14	103028594	103028654	(4015064)	+	L2b	LINE/L2	3307	3370	(5)	1256061
30	0.0	0.0	0.0	chr14	103056565	103056592	(3987126)	+	(GCGGGG)n	Simple_repeat	1	28	(0)	1256114
11	24.2	2.6	0.0	chr14	103056656	103056694	(3987024)	+	G-rich	Low_complexity	1	40	(0)	1256115
1625	16.9	0.3	10.2	chr14	103067420	103067751	(3975967)	C	AluJb	SINE/Alu	(12)	300	2	1256140
14	11.7	0.0	3.3	chr14	103075814	103075843	(3967875)	+	(CCGCT)n	Simple_repeat	1	30	(0)	1256158
12	18.8	2.6	2.6	chr14	103075866	103075903	(3967815)	+	(CCGCAG)n	Simple_repeat	1	39	(0)	1256159
2297	7.9	0.6	2.5	chr14	103075955	103076272	(3967446)	+	AluSx1	SINE/Alu	1	312	(0)	1256160
37	0.0	0.0	0.0	chr14	103103798	103103829	(3939889)	+	(GT)n	Simple_repeat	1	32	(0)	1256203
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
285	16.7	7.0	0.0	chr14	103632113	103632172	(3411546)	+	Alu	SINE/Alu	1	65	(68)	1257199
1865	9.9	5.6	0.0	chr14	103632173	103632424	(3411294)	+	AluSx	SINE/Alu	30	296	(16)	1257200
18	15.4	0.0	0.0	chr14	103693659	103693694	(3350024)	+	(CCGCC)n	Simple_repeat	1	36	(0)	1257338
35	0.0	0.0	0.0	chr14	103710854	103710883	(3332835)	+	(AC)n	Simple_repeat	1	30	(0)	1257360
16	15.0	5.3	5.0	chr14	103715758	103715814	(3327904)	+	G-rich	Low_complexity	1	60	(0)	1257366
456	28.3	0.9	0.0	chr14	103921710	103921822	(3121896)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1257798
815	17.8	3.1	10.5	chr14	104063958	104064233	(2979485)	C	L1MB8	LINE/L1	(6)	6172	5918	1258043
948	18.6	3.4	4.1	chr14	104064270	104064523	(2979195)	C	L1MA7	LINE/L1	(265)	6026	5774	1258044
184	36.7	3.0	0.0	chr14	104164556	104164653	(2879065)	C	L2c	LINE/L2	(260)	3115	3015	1258149
430	29.6	0.1	0.2	chr14	104164659	104165877	(2877841)	+	(TG)n	Simple_repeat	1	1220	(0)	1258152
1025	24.3	10.3	11.5	chr14	104428986	104429497	(2614221)	C	L1MC3	LINE/L1	(22)	7763	7259	1258420
22	16.2	2.0	2.0	chr14	104677815	104677864	(2365854)	+	(CCT)n	Simple_repeat	1	51	(0)	1258705
319	31.0	0.9	1.1	chr14	104685562	104686541	(2357177)	+	G-rich	Low_complexity	1	989	(0)	1258719
557	19.2	2.2	1.5	chr14	104698322	104698453	(2345265)	C	MER89	LTR/ERV1	(9)	550	418	1258730
12	23.6	0.0	6.0	chr14	104724609	104724658	(2319060)	+	(CACACG)n	Simple_repeat	1	50	(0)	1258757
12	26.4	3.8	4.9	chr14	104933598	104933676	(2110042)	+	(GGACAGG)n	Simple_repeat	1	82	(0)	1259013
12	16.6	0.0	0.0	chr14	104978416	104978442	(2065276)	+	(CCCCG)n	Simple_repeat	1	27	(0)	1259048
31	15.8	0.0	7.8	chr14	105021289	105021378	(2022340)	+	(GCCCC)n	Simple_repeat	1	90	(0)	1259101
16	14.9	0.0	4.9	chr14	105041980	105042020	(2001698)	+	(GCCCT)n	Simple_repeat	1	41	(0)	1259151
681	26.1	18.2	1.6	chr14	105042362	105042741	(2000977)	+	MLT1E2	LTR/ERVL-MaLR	143	624	(30)	1259152
568	21.5	2.6	2.4	chr14	105082739	105084244	(1959474)	+	(TCCA)n	Simple_repeat	1	1545	(0)	1259222
17	24.5	2.0	2.0	chr14	105089025	105089074	(1954644)	+	(GT)n	Simple_repeat	1	51	(0)	1259229
202	26.5	5.5	0.0	chr14	105090778	105090845	(1952873)	C	MIRb	SINE/MIR	(82)	186	115	1259230
19	14.3	7.6	5.9	chr14	105091823	105091901	(1951817)	+	(GCCAG)n	Simple_repeat	1	85	(0)	1259232
13	18.2	6.6	4.6	chr14	105093885	105093945	(1949773)	+	G-rich	Low_complexity	1	65	(0)	1259236
12	20.1	4.7	6.0	chr14	105094007	105094070	(1949648)	+	(CGGAGC)n	Simple_repeat	1	67	(0)	1259237
1833	15.3	2.3	2.3	chr14	105302574	105302880	(1740838)	C	AluJb	SINE/Alu	(5)	307	1	1259497
303	8.7	0.0	0.0	chr14	105302885	105302930	(1740788)	C	Alu	SINE/Alu	(87)	46	1	1259498
2005	15.8	2.9	0.0	chr14	105302932	105303228	(1740490)	C	AluSz	SINE/Alu	(6)	306	1	1259499
19	16.6	7.4	0.0	chr14	105304095	105304148	(1739570)	+	(CAGGA)n	Simple_repeat	1	58	(0)	1259502
1981	12.4	0.7	0.7	chr14	105304211	105304493	(1739225)	+	AluSc	SINE/Alu	2	284	(25)	1259503
12455	15.1	2.9	1.5	chr14	105362865	105364256	(1679462)	C	Tigger1	DNA/TcMar-Tigger	(964)	1454	23	1259584
1587	16.6	3.8	0.0	chr14	105375925	105376232	(1667486)	C	THE1D	LTR/ERVL-MaLR	(54)	327	8	1259607
346	36.1	4.8	0.9	chr14	105376277	105376494	(1667224)	+	L1ME1	LINE/L1	5891	6117	(62)	1259608
752	34.4	3.9	1.1	chr14	105377755	105378255	(1665463)	C	MLT1E2	LTR/ERVL-MaLR	(21)	603	83	1259610
193	14.7	2.9	0.0	chr14	105378366	105378399	(1665319)	C	MamRTE1	LINE/RTE-BovB	(3714)	98	64	1259611
1790	17.5	1.4	0.0	chr14	105378415	105378705	(1665013)	C	AluJr	SINE/Alu	(17)	295	1	1259612
14	19.9	6.6	3.1	chr14	105398207	105398267	(1645451)	+	(CGCCC)n	Simple_repeat	1	65	(0)	1259622
16	16.4	0.0	0.0	chr14	105475233	105475266	(1568452)	+	G-rich	Low_complexity	1	34	(0)	1259732
33	21.7	5.6	0.9	chr14	105484618	105484725	(1558993)	+	(TGTGTC)n	Simple_repeat	1	114	(0)	1259739
42	0.0	0.0	0.0	chr14	105511701	105511736	(1531982)	+	(AC)n	Simple_repeat	1	36	(0)	1259770
5682	14.6	7.3	1.3	chr15	33915146	33916412	(68074777)	+	L1PBa	LINE/L1	1	1500	(5362)	1281937
1691	10.7	11.2	4.3	chr15	40394803	40395083	(61596106)	C	AluSx1	SINE/Alu	(9)	303	1	1291110
954	10.9	0.0	2.9	chr15	40395084	40395221	(61595968)	C	AluSz6	SINE/Alu	(178)	134	1	1291111
528	14.0	0.0	0.0	chr15	40694892	40695002	(61296187)	C	FRAM	SINE/Alu	(81)	221	1	1291742
198	28.6	0.9	11.8	chr15	40755503	40755629	(61235560)	+	L2c	LINE/L2	2971	3083	(343)	1291862
574	20.1	3.1	5.2	chr15	40795131	40795264	(61195925)	+	FLAM_C	SINE/Alu	2	132	(11)	1291933
18	20.6	0.0	4.0	chr15	40795265	40795314	(61195875)	+	GA-rich	Low_complexity	1	50	(0)	1291934
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
23	21.6	0.0	0.0	chr15	40879743	40879790	(61111399)	+	(GT)n	Simple_repeat	1	48	(0)	1292126
11	20.2	2.9	0.0	chr15	41493782	41493815	(60497374)	+	G-rich	Low_complexity	1	35	(0)	1293495
19	7.2	0.0	0.0	chr15	41564509	41564537	(60426652)	+	(GGGA)n	Simple_repeat	1	29	(0)	1293653
13	7.8	3.5	3.3	chr15	42045434	42045462	(59945727)	+	(CCAG)n	Simple_repeat	1	30	(0)	1294465
13	19.1	0.0	0.0	chr15	42575235	42575264	(59415925)	+	G-rich	Low_complexity	1	30	(0)	1295396
13	19.6	0.0	0.0	chr15	43185248	43185277	(58805912)	+	G-rich	Low_complexity	1	30	(0)	1296537
2338	7.5	1.4	0.3	chr15	43826580	43826872	(58164317)	C	AluSq2	SINE/Alu	(17)	296	1	1297708
14	22.5	0.0	2.3	chr15	43826950	43826992	(58164197)	+	(GCCCC)n	Simple_repeat	1	43	(0)	1297709
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
299	37.1	6.6	1.9	chr15	45158183	45158424	(56832765)	+	L3b	LINE/CR1	4662	4887	(345)	1300148
2229	14.2	0.3	0.0	chr15	45428646	45428948	(56562241)	+	AluSz6	SINE/Alu	1	304	(8)	1300638
1929	15.4	1.0	0.0	chr15	50256393	50256685	(51734504)	C	AluJb	SINE/Alu	(16)	296	1	1307361
16	15.5	2.8	0.0	chr15	50765403	50765438	(51225751)	+	(GCCCCG)n	Simple_repeat	1	37	(0)	1308471
13	20.2	4.3	2.0	chr15	50765626	50765672	(51225517)	+	(CCGGA)n	Simple_repeat	1	49	(0)	1308472
18	17.9	0.0	4.2	chr15	51094767	51094814	(50896375)	+	(GCGCCCC)n	Simple_repeat	1	48	(0)	1309038
911	29.5	8.5	2.0	chr15	51109978	51110437	(50880752)	C	L2a	LINE/L2	(2)	3424	2932	1309062
12	19.9	0.0	8.3	chr15	58771059	58771106	(43220083)	+	(GCCC)n	Simple_repeat	1	48	(0)	1320768
256	27.5	6.1	8.0	chr15	58866294	58866443	(43124746)	+	MER58A	DNA/hAT-Charlie	1	147	(77)	1320987
480	25.8	1.5	0.0	chr15	58866515	58866578	(43124611)	C	MER33	DNA/hAT-Charlie	(19)	305	242	1320988
772	17.9	3.9	0.0	chr15	59539848	59539970	(42451219)	C	FLAM_C	SINE/Alu	(10)	133	6	1322271
1492	23.5	1.4	14.9	chr15	59539972	59540356	(42450833)	+	L1MB4	LINE/L1	5564	5870	(310)	1322266
2056	11.8	2.9	0.3	chr15	59689818	59690122	(42301067)	+	AluSq2	SINE/Alu	1	313	(0)	1322576
290	29.7	2.8	8.6	chr15	60396904	60397054	(41594135)	C	MIRc	SINE/MIR	(1)	267	126	1323704
20	19.2	0.0	2.0	chr15	60398048	60398096	(41593093)	+	(CCCGC)n	Simple_repeat	1	49	(0)	1323705
61	0.0	0.0	0.0	chr15	60398784	60398835	(41592354)	+	(GT)n	Simple_repeat	1	52	(0)	1323707
25	25.7	1.2	2.4	chr15	60592457	60592538	(41398651)	+	(CCG)n	Simple_repeat	1	83	(0)	1324034
33	0.0	0.0	0.0	chr15	60592630	60592660	(41398529)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	1324035
17	18.4	0.0	0.0	chr15	62243204	62243240	(39747949)	+	(CCACCC)n	Simple_repeat	1	37	(0)	1326565
1096	13.4	12.4	1.5	chr15	62244321	62244521	(39746668)	C	7SLRNA	srpRNA	(0)	320	95	1326567
286	32.7	4.7	12.1	chr15	64023166	64023382	(37967807)	C	L2c	LINE/L2	(155)	3232	3029	1329588
187	26.5	2.0	0.0	chr15	64151485	64151533	(37839656)	+	L2b	LINE/L2	3324	3373	(2)	1329860
13	24.6	0.0	2.4	chr15	65185354	65185395	(36805794)	+	(CCCCCT)n	Simple_repeat	1	42	(0)	1332078
189	32.7	0.0	0.0	chr15	65287160	65287214	(36703975)	+	OldhAT1	DNA/hAT-Ac	2019	2073	(775)	1332297
13	26.2	3.7	5.9	chr15	65377693	65377700	(36613489)	+	(CGG)n	Simple_repeat	1	12	(73)	1332490
20	10.1	0.0	0.0	chr15	65377701	65377732	(36613457)	+	(GCA)n	Simple_repeat	1	32	(0)	1332491
396	30.6	2.2	0.7	chr15	65401262	65401396	(36589793)	+	MIR3	SINE/MIR	23	159	(49)	1332535
11	9.7	8.6	2.6	chr15	65401592	65401626	(36589563)	+	G-rich	Low_complexity	1	38	(0)	1332536
44	0.0	0.0	0.0	chr15	65422520	65422557	(36568632)	+	(AC)n	Simple_repeat	1	38	(0)	1332585
296	27.7	15.4	1.4	chr15	65436012	65436150	(36555039)	C	MIRb	SINE/MIR	(82)	186	25	1332625
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
2029	21.8	6.6	2.7	chr15	65533131	65533682	(36457507)	C	MER90	LTR/ERV1	(0)	575	1	1332850
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
1436	13.6	6.6	9.0	chr15	66356914	66357223	(35633966)	C	AluJb	SINE/Alu	(9)	303	2	1334510
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
442	30.3	6.9	11.4	chr15	66401475	66401958	(35589231)	C	L2c	LINE/L2	(4)	3383	2923	1334632
525	20.5	7.6	13.3	chr15	66462109	66462219	(35528970)	+	L1MC5a	LINE/L1	2567	2664	(113)	1334749
2311	8.8	1.6	0.0	chr15	66462220	66462516	(35528673)	+	AluSx	SINE/Alu	1	302	(10)	1334750
12	22.4	2.7	0.0	chr15	66701480	66701516	(35289673)	+	(CCGG)n	Simple_repeat	1	38	(0)	1335296
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
198	11.4	0.0	2.8	chr15	66851714	66851749	(35139440)	C	L2	LINE/L2	(774)	2645	2611	1335581
5316	7.8	1.9	0.3	chr15	66895302	66895981	(35095208)	C	LTR8	LTR/ERV1	(0)	691	1	1335658
819	28.4	5.1	3.2	chr15	66923185	66923530	(35067659)	C	MLT1L	LTR/ERVL-MaLR	(224)	386	34	1335715
378	35.1	6.0	2.4	chr15	66923572	66923860	(35067329)	C	L2b	LINE/L2	(118)	3257	2958	1335716
230	5.0	9.1	2.4	chr15	67107230	67107270	(34883919)	C	MamTip2	DNA/hAT-Tip100	(156)	149	106	1336085
1851	18.1	0.0	1.3	chr15	67123974	67124287	(34866902)	C	AluJr	SINE/Alu	(1)	311	2	1336116
19	10.0	0.0	0.0	chr15	67191026	67191057	(34800132)	+	(CCCCG)n	Simple_repeat	1	32	(0)	1336230
38	0.0	0.0	0.0	chr15	67714415	67714455	(34276734)	+	(A)n	Simple_repeat	1	41	(0)	1337052
16	20.8	5.3	1.7	chr15	67823217	67823273	(34167916)	+	(GCGG)n	Simple_repeat	1	60	(0)	1337183
474	27.3	2.0	6.0	chr15	67884427	67884641	(34106548)	C	MIR	SINE/MIR	(51)	211	4	1337305
13	13.1	0.0	7.7	chr15	67968242	67968280	(34022909)	+	(CAGAGG)n	Simple_repeat	1	39	(0)	1337479
21	26.9	2.0	4.8	chr15	68054173	68054274	(33936915)	+	G-rich	Low_complexity	1	104	(0)	1337661
2185	11.1	3.2	0.0	chr15	68076229	68076526	(33914663)	+	AluSc8	SINE/Alu	1	308	(3)	1337701
1852	12.9	7.0	0.0	chr15	68126447	68126724	(33864465)	C	AluSz	SINE/Alu	(13)	299	1	1337777
17	12.5	0.0	5.1	chr15	68623471	68623509	(33367680)	+	(CACCC)n	Simple_repeat	1	39	(0)	1338698
468	29.9	2.6	0.7	chr15	68698622	68698769	(33292420)	+	MIRb	SINE/MIR	41	191	(77)	1338868
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
64	22.0	1.8	2.4	chr15	69094220	69094386	(32896803)	+	GA-rich	Low_complexity	1	170	(0)	1339611
948	30.8	10.0	11.9	chr15	69172586	69173537	(32817652)	+	L3	LINE/CR1	2969	3900	(199)	1339764
298	25.1	5.3	12.0	chr15	69676063	69676292	(32314897)	C	LTR81A	LTR/Gypsy	(1088)	305	98	1340696
12	12.6	2.5	7.3	chr15	70033611	70033650	(31957539)	+	(GCCCAG)n	Simple_repeat	1	41	(0)	1341367
332	33.3	11.3	4.3	chr15	70089095	70089423	(31901766)	+	L2c	LINE/L2	3029	3383	(4)	1341452
224	11.4	0.0	0.0	chr15	70089421	70089455	(31901734)	C	MIR3	SINE/MIR	(52)	156	122	1341453
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
258	33.9	13.5	3.8	chr15	70121553	70121791	(31869398)	+	L2c	LINE/L2	3081	3346	(41)	1341505
301	33.1	4.7	0.0	chr15	70121844	70121985	(31869204)	+	MIRc	SINE/MIR	56	204	(64)	1341506
313	28.5	21.3	1.0	chr15	70189663	70189871	(31801318)	C	MIRb	SINE/MIR	(3)	265	3	1341665
352	26.9	5.2	4.0	chr15	70264702	70264852	(31726337)	C	MIR3	SINE/MIR	(49)	159	7	1341821
17	9.1	2.6	5.0	chr15	70493087	70493125	(31498064)	+	(CCCCA)n	Simple_repeat	1	40	(0)	1342252
2889	18.1	5.8	3.7	chr15	70789276	70789787	(31201402)	+	MER6A	DNA/TcMar-Tigger	39	559	(46)	1342739
2002	14.8	0.3	0.7	chr15	71329799	71330101	(30661088)	+	AluJb	SINE/Alu	1	302	(10)	1343563
18	28.7	0.0	2.8	chr15	72230283	72230354	(29760835)	+	(CCCGCCG)n	Simple_repeat	1	69	(0)	1345107
1867	13.5	8.6	0.4	chr15	72481428	72481693	(29509496)	+	AluSz	SINE/Alu	1	290	(22)	1345565
16	16.9	0.0	0.0	chr15	73368510	73368542	(28622647)	+	(CCCT)n	Simple_repeat	1	33	(0)	1347012
1682	16.5	1.0	6.0	chr15	73647202	73647517	(28343672)	C	AluJr	SINE/Alu	(12)	300	1	1347465
2201	26.6	7.9	9.4	chr15	73647518	73648269	(28342920)	C	L1MEc	LINE/L1	(5491)	909	93	1347457
12	26.9	0.0	4.1	chr15	73684332	73684380	(28306809)	+	(CCGGC)n	Simple_repeat	1	49	(0)	1347538
21	15.2	3.8	1.8	chr15	73684449	73684501	(28306688)	+	(CGGCG)n	Simple_repeat	1	55	(0)	1347539
15	17.0	0.0	0.0	chr15	73684943	73684975	(28306214)	+	G-rich	Low_complexity	1	33	(0)	1347540
730	32.6	11.6	3.3	chr15	73691180	73691670	(28299519)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	49	1347554
28	14.0	5.8	4.4	chr15	74054087	74054172	(27937017)	+	G-rich	Low_complexity	1	91	(0)	1348180
12	17.5	3.1	0.0	chr15	74201193	74201224	(27789965)	+	(CCCAGC)n	Simple_repeat	1	33	(0)	1348435
22	3.8	0.0	0.0	chr15	74317884	74317910	(27673279)	+	(T)n	Simple_repeat	1	27	(0)	1348645
14	30.0	0.0	5.3	chr15	74318141	74318216	(27672973)	+	G-rich	Low_complexity	1	76	(0)	1348646
16	3.0	0.0	13.3	chr15	74407364	74407408	(27583781)	+	(GGCCT)n	Simple_repeat	1	45	(0)	1348783
200	33.6	2.7	6.1	chr15	74783412	74783525	(27207664)	C	MIR3	SINE/MIR	(25)	183	74	1349518
1929	15.7	2.6	0.0	chr15	74818414	74818707	(27172482)	+	AluSz	SINE/Alu	2	303	(9)	1349584
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
408	30.5	1.2	2.9	chr15	75104760	75104931	(26886258)	C	L1MEg	LINE/L1	(6199)	201	33	1350171
2203	13.1	0.0	1.0	chr15	75204465	75204809	(26786380)	C	AluSz	SINE/Alu	(0)	312	1	1350398
659	17.1	3.7	0.0	chr15	75307927	75308055	(26683134)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	1350535
14	27.3	3.5	0.0	chr15	75578551	75578607	(26412582)	+	G-rich	Low_complexity	1	59	(0)	1351122
1591	13.8	7.4	5.2	chr15	75635947	75636236	(26354953)	C	AluJb	SINE/Alu	(15)	297	1	1351272
13	8.8	0.0	3.9	chr15	75661288	75661313	(26329876)	+	(CCCG)n	Simple_repeat	1	26	(0)	1351324
711	17.6	2.2	0.8	chr15	75801957	75802088	(26189101)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	1351529
13	15.0	5.1	2.4	chr15	75802299	75802337	(26188852)	+	(CCACCCA)n	Simple_repeat	1	41	(0)	1351530
1748	15.2	4.4	0.0	chr15	75903475	75903756	(26087433)	+	AluJb	SINE/Alu	2	296	(16)	1351719
572	31.5	19.3	1.9	chr15	76190062	76190851	(25800338)	C	L2a	LINE/L2	(139)	3287	2308	1352155
531	21.4	15.9	1.2	chr15	77029753	77029913	(24961276)	C	MIR	SINE/MIR	(46)	216	28	1353438
313	30.8	33.9	2.4	chr15	77609760	77609930	(24381259)	C	MIRb	SINE/MIR	(35)	233	9	1354346
280	32.0	8.4	2.4	chr15	77609872	77610033	(24381156)	+	MIRb	SINE/MIR	34	192	(16)	1354347
12	31.1	1.8	0.0	chr15	77819965	77820019	(24171170)	+	(CTCTCC)n	Simple_repeat	1	56	(0)	1354732
602	20.9	3.7	0.0	chr15	77959747	77959875	(24031314)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	1354953
2313	10.1	0.0	0.0	chr15	78373144	78373439	(23617750)	C	AluSz	SINE/Alu	(16)	296	1	1355748
12	22.0	4.8	0.0	chr15	79186614	79186655	(22804534)	+	(TGACCC)n	Simple_repeat	1	44	(0)	1357412
2442	8.7	0.6	0.0	chr15	80033901	80034211	(21956978)	+	AluSq2	SINE/Alu	1	313	(0)	1358834
12	16.8	6.3	8.3	chr15	80059481	80059559	(21931630)	+	(TCCGGCC)n	Simple_repeat	1	84	(0)	1358903
325	28.0	3.6	0.0	chr15	80977911	80978017	(21013172)	C	MLT1G1	LTR/ERVL-MaLR	(469)	126	16	1360462
2098	13.0	5.5	0.0	chr15	81912602	81912894	(20078295)	C	AluSq	SINE/Alu	(3)	310	1	1362017
19	17.7	0.0	10.3	chr15	82680391	82680468	(19310721)	+	G-rich	Low_complexity	1	78	(0)	1363260
2258	10.2	0.7	0.0	chr15	82749090	82749384	(19241805)	C	AluSq2	SINE/Alu	(16)	297	1	1363375
13	13.1	2.7	5.3	chr15	82952719	82952755	(19038434)	+	(GCGG)n	Simple_repeat	1	38	(0)	1363737
626	35.0	1.6	2.0	chr15	83841356	83841600	(18149589)	+	MIR	SINE/MIR	13	256	(6)	1365222
4052	12.5	3.8	15.6	chr15	83841650	83842560	(18148629)	+	LTR1A1	LTR/ERV1	1	799	(0)	1365223
1203	10.7	0.6	0.0	chr15	84570010	84570168	(17421021)	C	AluSq10	SINE/Alu	(153)	160	1	1366183
1899	15.6	0.0	4.9	chr15	84685247	84685573	(17305616)	C	AluJb	SINE/Alu	(1)	311	1	1366412
39	8.7	5.2	5.0	chr15	84889630	84889661	(17101528)	+	(TTTC)n	Simple_repeat	1	31	(0)	1366829
106	4.2	0.8	1.6	chr15	84889662	84889789	(17101400)	+	(TTCC)n	Simple_repeat	1	129	(0)	1366830
470	21.4	8.8	2.0	chr15	84894685	84894832	(17096357)	C	MIRc	SINE/MIR	(12)	256	98	1366841
233	22.9	1.6	0.0	chr15	84980664	84980724	(17010465)	C	MIR3	SINE/MIR	(77)	131	70	1367055
1020	27.5	9.9	5.7	chr15	85317841	85318311	(16672878)	+	MLT1K	LTR/ERVL-MaLR	100	592	(3)	1367585
210	21.1	8.1	1.7	chr15	88546231	88546288	(13444901)	+	MIR3	SINE/MIR	72	133	(75)	1372569
469	24.4	7.0	9.6	chr15	88614741	88614864	(13376325)	+	MER5B	DNA/hAT-Charlie	7	124	(54)	1372685
2522	18.8	4.2	6.0	chr15	88627300	88627898	(13363291)	C	Tigger9b	DNA/TcMar-Tigger	(30)	594	7	1372713
1989	28.6	6.9	0.8	chr15	88836880	88837503	(13153686)	+	MER115	DNA/hAT-Tip100	10	674	(19)	1373112
222	33.3	5.1	2.6	chr15	88905202	88905315	(13085874)	+	MIR3	SINE/MIR	17	133	(75)	1373229
543	20.9	3.4	0.0	chr15	88905322	88905436	(13085753)	C	L2a	LINE/L2	(0)	3426	3308	1373230
288	28.7	0.0	3.3	chr15	89149618	89149724	(12841465)	C	L2c	LINE/L2	(260)	3127	3023	1373724
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
2184	10.9	0.0	2.3	chr15	89452280	89452581	(12538608)	C	AluSz	SINE/Alu	(17)	295	1	1374236
261	34.8	0.0	0.0	chr15	89452618	89452709	(12538480)	+	MLT1L	LTR/ERVL-MaLR	120	211	(399)	1374237
65	0.0	0.0	0.0	chr15	89470497	89470551	(12520638)	+	(GT)n	Simple_repeat	1	55	(0)	1374261
1913	13.6	0.7	0.0	chr15	89498012	89498319	(12492870)	C	AluJb	SINE/Alu	(0)	312	1	1374320
302	30.1	1.5	5.7	chr15	89498344	89498484	(12492705)	C	L1M5	LINE/L1	(333)	5791	5657	1374321
620	25.0	9.2	3.7	chr15	90184398	90184613	(11806576)	C	MIRb	SINE/MIR	(0)	268	40	1375845
225	25.6	8.8	0.8	chr15	90388822	90388917	(11602272)	+	MIR3	SINE/MIR	45	140	(128)	1376269
1683	14.7	0.0	4.6	chr15	90528896	90529180	(11462009)	+	AluJb	SINE/Alu	3	274	(38)	1376555
1355	25.9	9.4	1.2	chr15	90624811	90625209	(11365980)	+	MER115	DNA/hAT-Tip100	259	693	(0)	1376749
2215	12.0	0.7	0.0	chr15	90683622	90683930	(11307259)	+	AluSq2	SINE/Alu	3	313	(0)	1376866
266	27.8	7.7	4.4	chr15	90885998	90886110	(11105079)	+	MIR	SINE/MIR	16	132	(130)	1377300
683	14.8	10.2	2.6	chr15	90886249	90886401	(11104788)	+	MER58A	DNA/hAT-Charlie	45	210	(14)	1377301
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
909	17.5	1.8	0.0	chr15	92808875	92809040	(9182149)	+	AluJr	SINE/Alu	138	306	(6)	1380509
1614	18.4	0.7	4.7	chr15	96125502	96125822	(5865367)	C	AluJb	SINE/Alu	(0)	312	5	1385408
328	31.4	13.6	1.6	chr15	96125875	96126062	(5865127)	C	LTR81A	LTR/Gypsy	(1048)	302	89	1385406
352	32.0	6.9	1.5	chr15	98818257	98818516	(3172673)	C	L2	LINE/L2	(460)	2959	2685	1389206
259	17.8	0.0	0.0	chr15	98818521	98818565	(3172624)	C	MER20	DNA/hAT-Charlie	(2)	217	173	1389207
1033	17.8	1.4	9.0	chr15	98818618	98818851	(3172338)	C	MER20	DNA/hAT-Charlie	(3)	216	1	1389208
194	26.7	6.2	4.3	chr15	99408112	99408205	(2582984)	+	MIRb	SINE/MIR	103	198	(70)	1390075
20	16.4	0.0	0.0	chr15	99412126	99412159	(2579030)	+	(T)n	Simple_repeat	1	34	(0)	1390082
267	30.4	2.6	0.0	chr15	99412390	99412501	(2578688)	+	MamGypLTR1d	LTR/Gypsy	662	776	(37)	1390083
23	21.9	1.0	8.0	chr15	99565288	99565386	(2425803)	+	(CCCGC)n	Simple_repeat	1	100	(0)	1390312
763	30.4	13.8	2.0	chr15	99708811	99709549	(2281640)	C	L2a	LINE/L2	(351)	3068	2229	1390488
18	24.8	0.0	2.2	chr15	99790753	99790798	(2200391)	+	(AC)n	Simple_repeat	1	46	(0)	1390626
23	7.1	6.5	2.0	chr15	101277420	101277465	(713724)	+	(CCG)n	Simple_repeat	1	49	(0)	1392581
959	26.6	14.5	7.1	chr15	101608064	101608656	(382533)	+	LTR41B	LTR/ERVL	6	642	(116)	1393014
2343	10.1	0.7	0.0	chr15	101608657	101608962	(382227)	C	AluSx1	SINE/Alu	(4)	308	1	1393015
995	18.8	1.2	0.0	chr16	39487	39651	(90298694)	+	AluJb	SINE/Alu	134	300	(12)	1394091
2183	10.8	5.9	5.6	chr16	50824	51130	(90287215)	C	THE1C	LTR/ERVL-MaLR	(58)	317	1	1394115
1342	13.7	4.4	6.0	chr16	97259	97491	(90240854)	C	AluJb	SINE/Alu	(16)	296	68	1394165
17	21.1	5.8	2.7	chr16	273686	273754	(90064591)	+	G-rich	Low_complexity	1	73	(0)	1394508
14	16.9	0.0	2.9	chr16	352000	352034	(89986311)	+	(CCGGAC)n	Simple_repeat	1	35	(0)	1394625
12	17.9	3.1	0.0	chr16	353050	353081	(89985264)	+	G-rich	Low_complexity	1	33	(0)	1394628
19	12.6	5.2	4.9	chr16	568861	568918	(89769427)	+	(GGCTG)n	Simple_repeat	1	61	(0)	1394965
28	3.0	0.0	2.8	chr16	579011	579046	(89759299)	+	(GGGGC)n	Simple_repeat	1	36	(0)	1394975
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
11	6.7	5.4	7.7	chr16	641936	641972	(89696373)	+	(CCGGCGG)n	Simple_repeat	1	39	(0)	1395043
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
12	18.7	4.3	4.2	chr16	694083	694128	(89644217)	+	G-rich	Low_complexity	1	48	(0)	1395083
45	18.1	1.8	3.5	chr16	695289	695402	(89642943)	+	(CCCGC)n	Simple_repeat	1	116	(0)	1395085
12	21.5	6.0	1.9	chr16	706598	706647	(89631698)	+	(GGC)n	Simple_repeat	1	53	(0)	1395102
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
2063	12.2	1.0	1.3	chr16	745619	745727	(89592618)	C	AluSq	SINE/Alu	(203)	110	1	1395146
12	24.4	2.2	2.2	chr16	745853	745897	(89592448)	+	G-rich	Low_complexity	1	46	(0)	1395148
21	23.2	1.4	2.9	chr16	832744	832812	(89505533)	+	(CCCGC)n	Simple_repeat	1	70	(0)	1395263
288	30.4	19.4	2.4	chr16	978935	979146	(89359199)	+	L2a	LINE/L2	3109	3416	(10)	1395372
16	13.7	4.8	2.3	chr16	1180651	1180692	(89157653)	+	G-rich	Low_complexity	1	44	(0)	1395575
27	24.4	0.5	11.2	chr16	1195144	1195330	(89143015)	+	(GGCGG)n	Simple_repeat	1	188	(0)	1395581
18	22.4	5.6	4.2	chr16	1195299	1195388	(89142957)	+	G-rich	Low_complexity	1	95	(0)	1395582
16	33.8	0.0	3.3	chr16	1206907	1206996	(89131349)	+	(CCCCCCA)n	Simple_repeat	1	90	(0)	1395590
18	26.1	0.0	8.3	chr16	1379275	1379370	(88958975)	+	(GCCCC)n	Simple_repeat	1	96	(0)	1395811
284	22.5	6.6	0.0	chr16	1498851	1498921	(88839424)	+	MER58A	DNA/hAT-Charlie	1	76	(148)	1396014
2191	7.4	5.3	0.0	chr16	1705387	1705670	(88632675)	+	AluSz	SINE/Alu	6	305	(7)	1396283
35	23.7	3.6	3.5	chr16	1763788	1763924	(88574421)	+	G-rich	Low_complexity	1	142	(0)	1396368
261	33.8	2.1	2.1	chr16	1812906	1813050	(88525295)	+	L1M5	LINE/L1	5505	5649	(530)	1396419
1680	20.9	10.0	0.0	chr16	1813056	1813443	(88524902)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	1396420
533	24.6	10.9	0.0	chr16	1859877	1860063	(88478282)	+	LTR16A1	LTR/ERVL	245	454	(2)	1396508
2857	22.7	3.0	1.6	chr16	1935411	1936026	(88402319)	C	ERVL-B4-int	LTR/ERVL	(4070)	1644	1012	1396669
1945	10.3	4.0	0.0	chr16	1963336	1963598	(88374747)	+	AluSx3	SINE/Alu	1	274	(37)	1396720
12	15.9	6.5	4.1	chr16	1979375	1979420	(88358925)	+	(GCCCC)n	Simple_repeat	1	49	(0)	1396741
27	3.5	0.0	0.0	chr16	1990265	1990294	(88348051)	+	(GCCCCCT)n	Simple_repeat	1	30	(0)	1396751
1239	12.9	15.0	7.6	chr16	2015335	2015598	(88322747)	C	AluJb	SINE/Alu	(20)	292	6	1396789
192	21.0	11.4	3.1	chr16	2015600	2015663	(88322682)	C	X6B_LINE	LINE/CR1	(307)	765	696	1396790
13	23.3	1.8	5.3	chr16	2044352	2044407	(88293938)	+	(GGCG)n	Simple_repeat	1	57	(0)	1396828
224	36.6	1.6	4.5	chr16	2085879	2086078	(88252267)	C	L2	LINE/L2	(706)	2713	2520	1396876
45	12.8	4.1	2.0	chr16	2161169	2161265	(88177080)	+	(CCCT)n	Simple_repeat	1	101	(0)	1396976
31	32.7	0.0	1.6	chr16	2178771	2178895	(88159450)	+	(AGCCC)n	Simple_repeat	1	125	(0)	1396987
342	33.1	3.4	2.5	chr16	2224219	2224418	(88113927)	+	MIR	SINE/MIR	2	201	(7)	1397069
470	31.8	14.9	2.4	chr16	2769421	2770193	(87568152)	+	L2c	LINE/L2	2485	3369	(18)	1397893
2086	11.9	3.1	0.0	chr16	2779884	2780168	(87558177)	C	AluSx3	SINE/Alu	(16)	295	2	1397910
591	15.3	3.3	0.8	chr16	2780281	2780399	(87557946)	+	MER21A	LTR/ERVL	149	270	(661)	1397911
2377	16.9	12.2	0.4	chr16	2795579	2796105	(87542240)	C	LTR8B	LTR/ERV1	(0)	820	223	1397941
29	10.1	1.9	0.0	chr16	2925419	2925472	(87412873)	+	(GTCCCACTCA)n	Simple_repeat	1	55	(0)	1398198
16	4.5	0.0	0.0	chr16	2969361	2969383	(87368962)	+	(GCC)n	Simple_repeat	1	23	(0)	1398274
2412	7.1	0.0	0.0	chr16	2983921	2984215	(87354130)	+	AluSq2	SINE/Alu	1	295	(18)	1398295
13	16.3	2.8	2.7	chr16	3013386	3013421	(87324924)	+	(GCTGG)n	Simple_repeat	1	37	(0)	1398334
19	23.5	2.9	2.9	chr16	3020314	3020381	(87317964)	+	(GGC)n	Simple_repeat	1	70	(0)	1398343
12	9.1	4.2	0.0	chr16	3021857	3021880	(87316465)	+	(CATT)n	Simple_repeat	1	25	(0)	1398345
15	21.8	0.0	8.7	chr16	3028141	3028215	(87310130)	+	(CGGCG)n	Simple_repeat	1	68	(0)	1398353
13	8.8	0.0	12.8	chr16	3028306	3028352	(87309993)	+	(CCCGC)n	Simple_repeat	1	47	(0)	1398354
2192	12.6	0.0	1.9	chr16	3068294	3068610	(87269735)	C	AluSx3	SINE/Alu	(0)	311	1	1398440
5769	10.9	2.6	0.0	chr16	3070276	3071172	(87267173)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	711	1398442
18	20.0	1.8	3.6	chr16	3100288	3100342	(87238003)	+	G-rich	Low_complexity	1	56	(0)	1398491
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
622	0.0	0.0	0.0	chr16	3182635	3182706	(87155639)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1398678
622	0.0	0.0	0.0	chr16	3189634	3189705	(87148640)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	1398695
2421	6.3	1.0	0.3	chr16	3263367	3263666	(87074679)	C	AluSx4	SINE/Alu	(8)	302	1	1398853
220	32.1	8.7	0.0	chr16	3500675	3500758	(86837587)	+	MIR	SINE/MIR	152	243	(19)	1399286
54	10.5	4.5	2.6	chr16	3871017	3871139	(86467206)	+	A-rich	Low_complexity	1	125	(0)	1399952
20	4.1	0.0	0.0	chr16	3871175	3871199	(86467146)	+	(TC)n	Simple_repeat	1	25	(0)	1399953
41	0.0	0.0	0.0	chr16	3871200	3871234	(86467111)	+	(CA)n	Simple_repeat	1	35	(0)	1399954
2062	19.8	3.5	5.4	chr16	4110690	4110962	(86227383)	C	MER66B	LTR/ERV1	(218)	268	2	1400456
14	22.7	0.0	2.3	chr16	4253899	4253941	(86084404)	+	G-rich	Low_complexity	1	43	(0)	1400765
217	27.4	6.6	7.4	chr16	4265943	4266064	(86072281)	C	MIR3	SINE/MIR	(82)	126	6	1400788
16	17.4	4.3	2.0	chr16	4768720	4768766	(85569579)	+	(CGCCC)n	Simple_repeat	1	49	(0)	1401819
1447	16.7	0.8	0.8	chr16	4780154	4780387	(85557958)	C	AluJr	SINE/Alu	(78)	234	1	1401859
778	22.0	3.4	2.8	chr16	4780389	4780566	(85557779)	+	MER58A	DNA/hAT-Charlie	45	223	(1)	1401860
19	15.3	0.0	0.0	chr16	4785927	4785963	(85552382)	+	(GGTGG)n	Simple_repeat	1	37	(0)	1401875
219	37.2	0.8	7.9	chr16	4892454	4892593	(85445752)	C	MIRb	SINE/MIR	(36)	232	103	1402069
252	30.0	7.7	3.3	chr16	4892587	4892769	(85445576)	+	MIRb	SINE/MIR	34	218	(50)	1402070
397	20.0	10.3	4.5	chr16	4945137	4945246	(85393099)	C	MamRep38	DNA/hAT	(21)	274	158	1402200
2014	14.8	0.7	0.7	chr16	4945401	4945703	(85392642)	C	AluJr4	SINE/Alu	(9)	303	1	1402201
398	19.6	12.6	1.2	chr16	8621404	8621512	(81716833)	+	MIR	SINE/MIR	1	124	(144)	1409449
226	39.0	2.5	0.0	chr16	8641682	8641799	(81696546)	C	MIRb	SINE/MIR	(25)	243	123	1409489
210	23.6	5.3	1.4	chr16	8641833	8641905	(81696440)	+	MER91A	DNA/hAT-Tip100	25	100	(96)	1409490
23	14.4	2.2	0.0	chr16	8869195	8869240	(81469105)	+	G-rich	Low_complexity	1	47	(0)	1410011
14	10.9	5.0	9.5	chr16	8963818	8963877	(81374468)	+	(TCGGCG)n	Simple_repeat	1	63	(0)	1410168
32	16.0	7.9	1.8	chr16	8963924	8964025	(81374320)	+	(CGCGGAG)n	Simple_repeat	1	108	(0)	1410169
313	27.2	6.2	12.2	chr16	8986068	8986289	(81352056)	C	L2a	LINE/L2	(20)	3406	3148	1410238
2068	9.5	0.7	7.6	chr16	9126953	9127128	(81211217)	C	AluSx	SINE/Alu	(19)	293	138	1410623
2048	8.6	0.0	3.7	chr16	9127129	9127396	(81210949)	C	AluSx	SINE/Alu	(54)	258	1	1410624
2135	10.8	2.4	0.0	chr16	9156956	9157242	(81181103)	C	AluSx1	SINE/Alu	(18)	294	1	1410707
324	21.8	2.7	14.7	chr16	9157243	9157339	(81181006)	C	Charlie15a	DNA/hAT-Charlie	(39)	185	102	1410706
12	14.9	4.9	4.7	chr16	10580554	10580594	(79757751)	+	(GCTG)n	Simple_repeat	1	43	(0)	1413754
659	26.0	11.5	2.5	chr16	10600945	10601181	(79737164)	C	MER5C1	DNA/hAT-Charlie	(0)	263	3	1413807
13	14.7	3.3	0.0	chr16	10653225	10653254	(79685091)	+	(CCTGC)n	Simple_repeat	1	31	(0)	1413942
197	23.8	5.6	5.6	chr16	10653360	10653448	(79684897)	+	MIRc	SINE/MIR	37	125	(143)	1413943
285	32.8	9.8	5.8	chr16	10682924	10683354	(79654991)	C	L2c	LINE/L2	(28)	3359	2910	1414036
2386	10.2	0.0	0.0	chr16	10773566	10773870	(79564475)	C	AluSx1	SINE/Alu	(7)	305	1	1414184
15	9.1	5.4	2.6	chr16	10878703	10878739	(79459606)	+	(TGGCTCC)n	Simple_repeat	1	39	(0)	1414460
2130	12.9	0.3	0.0	chr16	11350309	11350611	(78987734)	+	AluSx1	SINE/Alu	1	304	(8)	1415489
11	24.7	2.2	2.2	chr16	11402100	11402144	(78936201)	+	G-rich	Low_complexity	1	46	(0)	1415589
706	19.4	0.0	0.0	chr16	11515024	11515147	(78823198)	+	AluJo	SINE/Alu	1	124	(188)	1415864
318	31.5	8.6	0.0	chr16	11535427	11535571	(78802774)	+	MIRb	SINE/MIR	77	252	(10)	1415912
13	22.7	0.0	0.0	chr16	11915898	11915929	(78422416)	+	(GCG)n	Simple_repeat	1	32	(0)	1416786
806	28.1	4.5	0.0	chr16	12037114	12037323	(78301022)	C	MER58A	DNA/hAT-Charlie	(2)	222	3	1417121
590	37.9	0.4	0.0	chr16	12119725	12119951	(78218394)	+	MIRb	SINE/MIR	32	259	(9)	1417289
2271	12.2	0.0	0.0	chr16	12386843	12387145	(77951200)	+	AluSz	SINE/Alu	1	303	(9)	1417826
19	19.7	0.0	2.1	chr16	12803887	12803934	(77534411)	+	G-rich	Low_complexity	1	48	(0)	1418653
642	30.6	0.5	4.0	chr16	14110372	14110572	(76227773)	+	MIR3	SINE/MIR	9	202	(6)	1421523
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
428	23.6	1.8	3.3	chr16	14344521	14344640	(75993705)	+	MIR	SINE/MIR	61	182	(86)	1421913
1820	14.5	3.0	3.3	chr16	14373817	14374119	(75964226)	C	AluJr	SINE/Alu	(10)	302	1	1421992
226	30.2	5.8	3.8	chr16	14374156	14374344	(75964001)	C	L2c	LINE/L2	(29)	3346	3158	1421993
861	30.8	2.5	4.4	chr16	19136015	19136425	(71201920)	+	LTR16C	LTR/ERVL	83	485	(4)	1432786
2505	15.9	2.8	2.4	chr16	19368737	19369160	(70969185)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1433396
1051	16.1	4.4	13.6	chr16	19369161	19369421	(70968924)	+	L1MC3	LINE/L1	6796	7031	(754)	1433387
358	16.7	0.0	8.9	chr16	19695028	19695106	(70643239)	C	AluJb	SINE/Alu	(230)	72	1	1434133
2080	14.4	0.0	1.0	chr16	20812240	20812538	(69525807)	+	AluSz	SINE/Alu	1	296	(16)	1436531
34	0.0	0.0	0.0	chr16	21156997	21157025	(69181320)	+	(AC)n	Simple_repeat	1	29	(0)	1437294
13	22.5	2.0	3.9	chr16	21278385	21278434	(69059911)	+	(CCCCG)n	Simple_repeat	1	51	(0)	1437565
24	9.5	0.0	0.0	chr16	21300513	21300546	(69037799)	+	(A)n	Simple_repeat	1	34	(0)	1437612
780	13.1	3.0	1.5	chr16	21300547	21300678	(69037667)	+	LTR57	LTR/ERVL	270	403	(8)	1437613
401	11.8	4.2	0.0	chr16	21300682	21300749	(69037596)	C	LTR41B	LTR/ERVL	(581)	177	107	1437614
14	24.8	0.0	7.6	chr16	21301409	21301474	(69036871)	+	G-rich	Low_complexity	1	66	(0)	1437615
2405	14.0	4.1	0.6	chr16	21302895	21303245	(69035100)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1437620
1589	20.2	6.3	11.6	chr16	21303246	21303327	(69035018)	C	MER67D	LTR/ERV1	(419)	95	4	1437619
480	23.6	8.2	1.6	chr16	21952323	21952447	(68385898)	C	MER5A1	DNA/hAT-Charlie	(0)	166	33	1438991
11	21.2	0.0	2.9	chr16	22191055	22191089	(68147256)	+	(CCCTGC)n	Simple_repeat	1	35	(0)	1439494
759	0.0	0.0	0.0	chr16	22195710	22195792	(68142553)	C	tRNA-Leu-CTA	tRNA	(2)	83	1	1439502
297	28.7	11.8	1.9	chr16	22233074	22233233	(68105112)	+	L1ME4c	LINE/L1	540	717	(113)	1439604
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
1007	18.4	0.0	1.2	chr16	23229852	23230014	(67108331)	C	AluJr	SINE/Alu	(18)	294	134	1441721
2125	12.9	0.3	1.0	chr16	23230037	23230338	(67108007)	C	AluSq2	SINE/Alu	(12)	301	2	1441722
322	26.3	2.6	3.4	chr16	23453366	23453391	(66884954)	C	SVA_A	Retroposon/SVA	(1035)	352	236	1442306
996	7.7	0.0	0.0	chr16	23499644	23499760	(66838585)	C	AluY	SINE/Alu	(193)	118	2	1442418
196	22.3	18.3	3.1	chr16	23754404	23754500	(66583845)	C	MIRb	SINE/MIR	(151)	117	3	1443052
641	28.9	8.9	2.1	chr16	23883011	23883398	(66454947)	C	L2a	LINE/L2	(0)	3426	3010	1443375
514	32.7	9.9	0.6	chr16	23883424	23883734	(66454611)	C	L2a	LINE/L2	(493)	2926	2584	1443375
14	17.7	0.0	0.0	chr16	24014265	24014296	(66324049)	+	GA-rich	Low_complexity	1	32	(0)	1443668
1054	26.0	9.8	2.8	chr16	24834183	24834578	(65503767)	C	LTR16	LTR/ERVL	(0)	438	12	1445602
14	11.4	0.0	10.6	chr16	25015265	25015311	(65323034)	+	(GGCGG)n	Simple_repeat	1	47	(0)	1446013
25	12.3	0.0	2.1	chr16	25015438	25015484	(65322861)	+	(GCCGA)n	Simple_repeat	1	47	(0)	1446014
358	17.4	12.2	1.1	chr16	25066638	25066724	(65271621)	+	LTR53-int	LTR/ERVL	1379	1476	(1853)	1446146
12	27.3	2.0	2.0	chr16	27109836	27109885	(63228460)	+	(GCG)n	Simple_repeat	1	51	(0)	1450386
16	12.8	0.0	5.3	chr16	27345073	27345110	(62993235)	+	G-rich	Low_complexity	1	38	(0)	1450945
2126	14.9	0.0	0.0	chr16	27578583	27578877	(62759468)	C	AluSz	SINE/Alu	(17)	295	1	1451438
1009	31.5	11.3	5.9	chr16	28264588	28264990	(62073355)	C	L2a	LINE/L2	(961)	2458	2039	1453037
18	11.8	5.3	0.0	chr16	28278313	28278350	(62059995)	+	(CCACC)n	Simple_repeat	1	40	(0)	1453082
1087	16.7	0.0	1.1	chr16	28278351	28278524	(62059821)	C	AluJb	SINE/Alu	(21)	291	120	1453083
497	28.6	15.2	0.5	chr16	28281572	28281778	(62056567)	+	MIR	SINE/MIR	7	249	(13)	1453096
264	24.7	9.8	2.4	chr16	29127684	29127847	(61210498)	C	MIRc	SINE/MIR	(0)	268	83	1455241
16	14.7	0.0	0.0	chr16	29808046	29808075	(60530270)	+	(GGC)n	Simple_repeat	1	30	(0)	1456612
25	18.8	0.0	0.0	chr16	29810099	29810149	(60528196)	+	(GGCAGC)n	Simple_repeat	1	51	(0)	1456613
12	12.0	3.7	0.0	chr16	29810589	29810615	(60527730)	+	(TCCTC)n	Simple_repeat	1	28	(0)	1456614
15	14.4	0.0	0.0	chr16	29810653	29810676	(60527669)	+	(T)n	Simple_repeat	1	24	(0)	1456615
13	23.5	0.0	0.0	chr16	29900111	29900145	(60438200)	+	(GCCCG)n	Simple_repeat	1	35	(0)	1456817
12	25.5	3.8	1.8	chr16	29926074	29926126	(60412219)	+	(GCGCCCT)n	Simple_repeat	1	55	(0)	1456879
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
1935	16.5	0.3	0.7	chr16	29944267	29944569	(60393776)	+	AluJb	SINE/Alu	1	302	(10)	1456932
1215	23.0	12.7	1.9	chr16	29990217	29990678	(60347667)	C	L1ME4b	LINE/L1	(43)	849	331	1457029
1895	8.1	8.8	0.0	chr16	30012734	30012992	(60325353)	+	AluSq	SINE/Alu	1	284	(29)	1457062
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
3629	6.7	0.2	0.2	chr16	30158670	30159162	(60179183)	+	SVA_A	Retroposon/SVA	9	501	(886)	1457417
1198	10.8	0.0	0.6	chr16	30159164	30159322	(60179023)	+	AluSx1	SINE/Alu	137	295	(17)	1457418
25	10.2	0.0	2.3	chr16	30183646	30183689	(60154656)	+	(CTC)n	Simple_repeat	1	44	(0)	1457487
21	27.9	3.5	1.1	chr16	30370286	30370370	(59967975)	+	(GGCGC)n	Simple_repeat	1	88	(0)	1457867
1347	21.7	2.8	1.9	chr16	30482308	30482627	(59855718)	C	L2	LINE/L2	(417)	3002	2680	1458161
15	7.0	2.9	5.7	chr16	30527310	30527343	(59811002)	+	(CTC)n	Simple_repeat	1	35	(0)	1458286
442	10.0	1.6	0.0	chr16	30569365	30569424	(59768921)	C	FLAM_C	SINE/Alu	(44)	99	39	1458361
254	27.4	1.4	2.7	chr16	30569425	30569439	(59768906)	+	SVA_A	Retroposon/SVA	236	309	(1078)	1458362
497	15.9	1.6	4.5	chr16	30641438	30641569	(59696776)	C	L1ME3A	LINE/L1	(5)	6168	6041	1458541
1587	15.0	0.4	8.2	chr16	30641570	30641875	(59696470)	+	AluJr	SINE/Alu	1	282	(30)	1458542
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
15	7.3	3.2	3.1	chr16	30787523	30787553	(59550792)	+	(GGGCTG)n	Simple_repeat	1	32	(0)	1458842
23	9.1	0.0	0.0	chr16	30814728	30814763	(59523582)	+	(TTCC)n	Simple_repeat	1	36	(0)	1458925
1619	16.4	7.4	0.0	chr16	30814766	30815052	(59523293)	C	AluSg	SINE/Alu	(0)	310	1	1458926
2373	9.2	0.0	0.0	chr16	30822958	30823252	(59515093)	C	AluSg	SINE/Alu	(15)	295	1	1458954
740	32.8	12.0	3.0	chr16	30823290	30823880	(59514465)	+	L1MC	LINE/L1	2481	3148	(2998)	1458955
195	36.6	4.1	0.0	chr16	30950171	30950263	(59388082)	+	MIR3	SINE/MIR	19	115	(93)	1459272
314	33.5	15.2	2.0	chr16	30982730	30983122	(59355223)	C	L2	LINE/L2	(697)	2722	2269	1459336
1649	15.4	0.0	2.3	chr16	31051984	31052243	(59286102)	C	AluJr4	SINE/Alu	(54)	258	5	1459498
242	28.7	10.5	1.1	chr16	31052246	31052340	(59286005)	C	MLT1J	LTR/ERVL-MaLR	(153)	359	255	1459496
655	31.6	4.5	0.0	chr16	31052361	31052572	(59285773)	C	MLT1J	LTR/ERVL-MaLR	(290)	222	1	1459496
17	17.2	0.0	2.4	chr16	31073753	31073793	(59264552)	+	G-rich	Low_complexity	1	41	(0)	1459562
374	29.2	8.5	3.0	chr16	31085292	31085457	(59252888)	C	MIRb	SINE/MIR	(48)	220	45	1459567
1445	15.7	4.4	9.3	chr16	31092767	31093079	(59245266)	+	AluSg	SINE/Alu	5	301	(9)	1459581
17	15.9	0.0	0.0	chr16	31093270	31093304	(59245041)	+	G-rich	Low_complexity	1	35	(0)	1459582
2441	9.6	0.0	0.3	chr16	31101455	31101766	(59236579)	C	AluY	SINE/Alu	(0)	311	1	1459604
2044	21.3	3.9	8.8	chr16	31101767	31101789	(59236556)	+	MLT1F	LTR/ERVL-MaLR	479	493	(55)	1459601
864	11.2	0.0	6.7	chr16	31101790	31101923	(59236422)	+	FLAM_C	SINE/Alu	1	125	(18)	1459605
73	28.3	2.3	2.2	chr16	31135857	31136117	(59202228)	+	(GT)n	Simple_repeat	1	267	(0)	1459679
12	20.5	0.0	2.8	chr16	31179819	31179854	(59158491)	+	(CCCCCG)n	Simple_repeat	1	36	(0)	1459794
20	8.9	2.8	0.0	chr16	31202044	31202079	(59136266)	+	(TGCCC)n	Simple_repeat	1	37	(0)	1459827
225	26.6	12.3	14.7	chr16	31453846	31454024	(58884321)	C	MER102a	DNA/hAT-Charlie	(2)	328	143	1460352
610	12.0	1.5	22.2	chr16	31454025	31454108	(58884237)	+	FLAM_C	SINE/Alu	1	56	(87)	1460353
2323	10.4	0.0	0.0	chr16	31454109	31454407	(58883938)	C	AluY	SINE/Alu	(12)	299	1	1460354
200	29.5	1.6	1.6	chr16	46583308	46583369	(43754976)	+	L3	LINE/CR1	4033	4094	(5)	1465645
13	28.8	0.0	3.5	chr16	47461309	47461366	(42876979)	+	G-rich	Low_complexity	1	58	(0)	1467212
5446	18.0	13.3	1.5	chr16	47636272	47637543	(42700802)	+	MER52A	LTR/ERV1	1	1755	(0)	1467437
1274	16.9	7.3	2.1	chr16	49874672	49874956	(40463389)	C	MER58B	DNA/hAT-Charlie	(0)	341	41	1471281
2162	15.7	5.7	3.1	chr16	50396541	50397080	(39941265)	C	MLT2A2	LTR/ERVL	(0)	554	3	1472390
6860	19.2	15.1	7.5	chr16	50441059	50442669	(39895676)	+	MER52A	LTR/ERV1	1	1755	(0)	1472494
5918	12.1	17.6	3.2	chr16	50478052	50479139	(39859206)	C	MER52C	LTR/ERV1	(0)	1278	1	1472573
2412	18.3	5.3	1.1	chr16	51030383	51030847	(39307498)	C	MER66B	LTR/ERV1	(0)	486	1	1473617
21	23.1	3.3	0.0	chr16	51151701	51151761	(39186584)	+	(CCCT)n	Simple_repeat	1	63	(0)	1473829
18	3.4	0.0	8.3	chr16	54286943	54286980	(36051365)	+	(GCGGG)n	Simple_repeat	1	34	(0)	1479235
456	32.9	13.2	3.8	chr16	54722138	54722620	(35615725)	C	L2b	LINE/L2	(10)	3365	2845	1480019
24	22.6	1.5	1.5	chr16	55227334	55227438	(35110907)	+	(CTCT)n	Simple_repeat	1	105	(0)	1481019
312	30.7	5.7	3.4	chr16	55277504	55277742	(35060603)	C	L2c	LINE/L2	(164)	3223	2979	1481123
17	13.9	0.0	0.0	chr16	56425449	56425480	(33912865)	+	(GCCGG)n	Simple_repeat	1	32	(0)	1483026
38	18.6	4.7	1.8	chr16	56425481	56425527	(33912818)	+	(CGCTGC)n	Simple_repeat	41	112	(0)	1483025
294	37.6	3.0	0.0	chr16	56576867	56577028	(33761317)	+	L3	LINE/CR1	3784	3950	(149)	1483332
15	17.6	0.0	6.7	chr16	56730567	56730611	(33607734)	+	(CCTG)n	Simple_repeat	1	45	(0)	1483653
19	0.0	0.0	0.0	chr16	56931236	56931256	(33407089)	+	(T)n	Simple_repeat	1	21	(0)	1483994
1300	15.3	15.3	0.0	chr16	56964854	56965102	(33373243)	+	AluJb	SINE/Alu	1	294	(18)	1484064
592	13.9	0.0	0.0	chr16	56991709	56991794	(33346551)	C	AluSz6	SINE/Alu	(226)	86	1	1484124
1803	22.3	2.0	2.4	chr16	56991823	56992273	(33346072)	+	MLT1C	LTR/ERVL-MaLR	1	449	(18)	1484125
278	28.9	5.1	3.5	chr16	57277776	57277947	(33060398)	+	L1ME4b	LINE/L1	714	888	(4)	1484703
2262	5.1	5.9	0.0	chr16	57292425	57292697	(33045648)	C	AluY	SINE/Alu	(11)	300	11	1484744
2304	22.1	5.2	2.0	chr16	57292707	57293297	(33045048)	+	MER77B	LTR/ERVL	34	644	(56)	1484745
18	15.4	0.0	0.0	chr16	57756230	57756265	(32582080)	+	(GTGTGT)n	Simple_repeat	1	36	(0)	1485706
14	23.9	6.8	0.0	chr16	57756251	57756309	(32582036)	+	(TGTTTC)n	Simple_repeat	1	63	(0)	1485707
12	23.8	0.0	6.0	chr16	58001348	58001397	(32336948)	+	(CCGCC)n	Simple_repeat	1	50	(0)	1486244
12	18.8	2.6	2.6	chr16	58129651	58129688	(32208657)	+	(ACGTG)n	Simple_repeat	1	39	(0)	1486505
2447	18.8	2.4	7.5	chr16	58254954	58255529	(32082816)	C	MLT2B3	LTR/ERVL	(8)	546	1	1486744
1565	19.0	5.5	5.3	chr16	66205397	66205907	(24132438)	C	MER4CL34	LTR/ERV1	(0)	872	7	1499282
971	19.9	0.0	0.0	chr16	66256776	66256941	(24081404)	C	FRAM	SINE/Alu	(10)	166	1	1499379
330	22.8	4.4	0.0	chr16	66256942	66257030	(24081315)	C	MLT1C	LTR/ERVL-MaLR	(293)	97	4	1499378
587	26.3	12.3	2.7	chr16	66257037	66257321	(24081024)	+	L2a	LINE/L2	3070	3385	(2)	1499380
13644	14.1	1.8	1.1	chr16	66277161	66280775	(24057570)	+	L1PA15-16	LINE/L1	7	3430	(3419)	1499426
464	26.1	5.7	2.8	chr16	66516691	66516905	(23821440)	C	L2a	LINE/L2	(25)	3401	3133	1499878
2417	7.2	0.7	1.6	chr16	66694428	66694734	(23643611)	+	AluSx1	SINE/Alu	1	304	(8)	1500225
25	26.8	2.2	5.8	chr16	66696773	66696906	(23641439)	+	(GGCGG)n	Simple_repeat	1	137	(0)	1500229
14	25.0	1.6	4.8	chr16	66903713	66903774	(23434571)	+	(AGCCC)n	Simple_repeat	1	63	(0)	1500659
12	20.1	0.0	9.1	chr16	66903845	66903899	(23434446)	+	(CTACCA)n	Simple_repeat	1	55	(0)	1500660
14	17.9	6.5	4.5	chr16	67014089	67014150	(23324195)	+	(CCGC)n	Simple_repeat	1	66	(0)	1500882
2315	9.4	0.3	0.7	chr16	67161159	67161467	(23176878)	+	AluJo	SINE/Alu	1	308	(4)	1501199
13	22.7	2.4	0.0	chr16	67170484	67170524	(23167821)	+	(CCGCCC)n	Simple_repeat	1	42	(0)	1501209
12	22.1	2.7	0.0	chr16	67178507	67178543	(23159802)	+	G-rich	Low_complexity	1	38	(0)	1501222
13	17.7	5.3	0.0	chr16	67199061	67199098	(23139247)	+	G-rich	Low_complexity	1	40	(0)	1501244
1951	18.4	2.2	0.0	chr16	67463249	67463552	(22874793)	+	AluJo	SINE/Alu	1	311	(1)	1501660
13	10.7	6.7	0.0	chr16	67521560	67521589	(22816756)	+	GA-rich	Low_complexity	1	32	(0)	1501808
18	14.8	7.4	1.7	chr16	67652857	67652910	(22685435)	+	(GCG)n	Simple_repeat	1	58	(0)	1502110
13	4.1	0.0	9.7	chr16	67660948	67660978	(22677367)	+	(GGGC)n	Simple_repeat	1	31	(0)	1502113
407	31.1	7.5	6.3	chr16	67678575	67678797	(22659548)	+	MIRb	SINE/MIR	14	239	(29)	1502136
1947	16.9	0.3	0.0	chr16	67678886	67679186	(22659159)	+	AluJo	SINE/Alu	1	302	(10)	1502137
2168	11.1	0.3	0.0	chr16	67851201	67851488	(22486857)	+	AluSg	SINE/Alu	1	289	(21)	1502478
15	22.1	2.0	2.0	chr16	67874079	67874127	(22464218)	+	(AGAGTGG)n	Simple_repeat	1	50	(0)	1502519
2273	11.6	0.0	0.0	chr16	68031694	68031994	(22306351)	C	AluSx	SINE/Alu	(11)	301	1	1502795
15	8.8	0.0	0.0	chr16	68448443	68448466	(21889879)	+	(GGC)n	Simple_repeat	1	24	(0)	1503545
248	22.6	6.1	0.0	chr16	68731939	68732000	(21606345)	+	L1MC5a	LINE/L1	2657	2722	(55)	1504181
17	8.9	5.3	2.5	chr16	69311879	69311920	(21026425)	+	(CTCCT)n	Simple_repeat	1	43	(0)	1505549
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
2364	6.9	0.3	1.6	chr16	70386188	70386490	(19951855)	C	AluY	SINE/Alu	(12)	299	1	1507877
2171	9.5	1.6	5.4	chr16	70386491	70386636	(19951709)	C	AluSc	SINE/Alu	(164)	145	1	1507876
16	14.7	5.3	0.0	chr16	70439132	70439169	(19899176)	+	(CGC)n	Simple_repeat	1	40	(0)	1507981
17	28.0	1.7	0.0	chr16	70439170	70439180	(19899165)	+	(CCCGCC)n	Simple_repeat	28	61	(0)	1507980
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
375	30.1	3.1	0.8	chr16	71484168	71484291	(18854054)	+	L2b	LINE/L2	3228	3354	(21)	1509763
299	24.3	1.3	0.4	chr16	71625123	71625852	(18712493)	+	(GTGG)n	Simple_repeat	1	736	(0)	1510046
19	27.5	0.0	1.6	chr16	71859955	71860017	(18478328)	+	(GTGG)n	Simple_repeat	1	63	(0)	1510523
2040	16.0	0.3	3.0	chr16	73124143	73124478	(17213867)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	39	1512472
13	18.9	2.8	0.0	chr16	74607177	74607212	(15731133)	+	(GCCCC)n	Simple_repeat	1	37	(0)	1515038
2085	9.7	1.1	0.4	chr16	74729005	74729308	(15609037)	C	AluSc8	SINE/Alu	(0)	311	1	1515325
780	16.8	0.8	0.0	chr16	74729311	74729435	(15608910)	C	FLAM_A	SINE/Alu	(11)	131	6	1515326
17	25.9	3.5	1.7	chr16	74738177	74738251	(15600094)	+	GA-rich	Low_complexity	1	76	(0)	1515343
1956	15.6	0.3	0.0	chr16	74771180	74771462	(15566883)	C	AluSz	SINE/Alu	(0)	312	29	1515411
1102	12.8	0.0	0.6	chr16	74771480	74771635	(15566710)	C	AluSz	SINE/Alu	(157)	155	1	1515412
3926	11.9	8.3	12.6	chr16	75116948	75117367	(15220978)	+	MER4D1	LTR/ERV1	1	410	(490)	1516116
344	29.1	8.4	0.7	chr16	75248003	75248144	(15090201)	C	MIRb	SINE/MIR	(61)	207	54	1516379
189	23.1	0.0	0.0	chr16	75248284	75248322	(15090023)	+	L2b	LINE/L2	3317	3355	(20)	1516380
15	30.1	0.0	2.2	chr16	75254554	75254598	(15083747)	+	(CA)n	Simple_repeat	1	45	(0)	1516389
13	14.0	7.3	2.3	chr16	75256783	75256823	(15081522)	+	(CCTCT)n	Simple_repeat	1	44	(0)	1516393
298	30.1	6.6	5.0	chr16	75292908	75293026	(15045319)	C	MIR	SINE/MIR	(102)	160	40	1516477
1087	14.6	0.0	1.8	chr16	75509366	75509530	(14828815)	+	AluSx	SINE/Alu	134	295	(17)	1516943
2049	19.7	7.6	4.3	chr16	75733953	75734526	(14603819)	+	MER83A-int	LTR/ERV1	1084	1937	(2348)	1517393
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
19	22.1	0.0	3.6	chr16	77435189	77435244	(12903101)	+	GA-rich	Low_complexity	1	56	(0)	1519839
1163	21.1	0.0	0.5	chr16	78984342	78984546	(11353799)	C	MER58A	DNA/hAT-Charlie	(0)	224	21	1522765
1403	23.1	1.6	4.4	chr16	80380592	80380976	(9957369)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	1525187
873	14.3	0.0	3.8	chr16	81436914	81437046	(8901299)	C	FLAM_C	SINE/Alu	(15)	128	1	1527269
1150	28.6	0.2	4.8	chr16	81437047	81437096	(8901249)	+	L1ME1	LINE/L1	6130	6172	(7)	1527268
1600	14.9	1.0	9.8	chr16	81437097	81437412	(8900933)	+	AluJr	SINE/Alu	1	288	(24)	1527270
312	25.9	11.9	3.5	chr16	81460212	81460411	(8877934)	+	LTR33	LTR/ERVL	112	330	(185)	1527309
344	30.8	10.8	0.8	chr16	81514412	81514621	(8823724)	+	MIR	SINE/MIR	13	268	(0)	1527436
184	27.1	13.7	6.1	chr16	81730244	81730357	(8607988)	+	MamTip2	DNA/hAT-Tip100	182	305	(0)	1527883
27	17.7	0.0	1.7	chr16	81779195	81779253	(8559092)	+	(GGCGG)n	Simple_repeat	1	59	(0)	1528023
313	29.1	5.6	0.0	chr16	83971263	83971379	(6366966)	C	MER5B	DNA/hAT-Charlie	(23)	155	32	1531954
1020	14.5	1.3	0.0	chr16	84177274	84177425	(6160920)	C	AluSx1	SINE/Alu	(8)	304	151	1532293
331	20.5	0.2	0.3	chr16	84354970	84355613	(5982732)	+	(TGGA)n	Simple_repeat	1	645	(0)	1532671
252	24.3	0.0	1.3	chr16	84375788	84375862	(5962483)	+	L1ME4a	LINE/L1	6049	6122	(2)	1532711
2314	9.4	0.3	0.0	chr16	84621659	84621955	(5716390)	C	AluSx	SINE/Alu	(14)	298	1	1533221
1917	27.9	5.1	6.8	chr16	84621956	84622154	(5716191)	+	L1ME4b	LINE/L1	701	882	(10)	1533217
2411	9.1	0.0	0.0	chr16	84705223	84705530	(5632815)	C	AluSc8	SINE/Alu	(3)	308	1	1533433
231	30.0	9.1	1.0	chr16	84845489	84845589	(5492756)	C	MIR3	SINE/MIR	(37)	171	62	1533689
42532	7.3	1.5	0.4	chr16	84855696	84861284	(5477061)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1533707
726	24.5	3.7	0.9	chr16	84930163	84930372	(5407973)	+	MER6A	DNA/TcMar-Tigger	27	242	(363)	1533856
253	12.6	2.1	7.0	chr16	84930376	84931001	(5407344)	+	(GTGTGG)n	Simple_repeat	1	639	(0)	1533857
1215	17.0	7.3	2.2	chr16	84931017	84931287	(5407058)	C	MLT1D	LTR/ERVL-MaLR	(127)	378	93	1533858
608	32.2	12.8	4.9	chr16	85003874	85004624	(5333721)	+	L2c	LINE/L2	2152	2970	(449)	1533993
1553	11.3	0.9	3.1	chr16	85117595	85117823	(5220522)	+	AluSx3	SINE/Alu	81	304	(7)	1534211
1536	24.8	2.6	7.1	chr16	85160865	85160950	(5177395)	+	L1ME3A	LINE/L1	5584	5669	(504)	1534304
327	27.6	0.0	6.5	chr16	85234556	85234679	(5103666)	C	MIR1_Amn	SINE/MIR	(47)	183	68	1534452
13	11.8	7.7	2.4	chr16	85238539	85238577	(5099768)	+	(CTCTG)n	Simple_repeat	1	42	(0)	1534462
21	21.1	5.6	2.0	chr16	85329823	85329952	(5008393)	+	G-rich	Low_complexity	1	134	(0)	1534647
1244	27.2	4.5	4.2	chr16	85567278	85567723	(4770622)	C	MLT1G3	LTR/ERVL-MaLR	(45)	550	107	1535074
247	22.1	3.4	0.2	chr16	85612823	85612886	(4725459)	C	L2a	LINE/L2	(21)	3405	3290	1535145
220	38.9	4.1	2.1	chr16	85959913	85960054	(4378291)	C	MamSINE1	SINE/tRNA-RTE	(18)	272	128	1535757
17	30.0	0.0	5.6	chr16	86576147	86576211	(3762134)	+	(TTTGTTT)n	Simple_repeat	1	85	(0)	1536869
24	10.4	2.3	2.3	chr16	86576170	86576212	(3762133)	+	(TC)n	Simple_repeat	1	44	(0)	1536870
18	0.0	0.0	0.0	chr16	86576212	86576231	(3762114)	+	(T)n	Simple_repeat	1	20	(0)	1536871
190	15.4	1.5	0.0	chr16	86703118	86703451	(3634894)	+	(CA)n	Simple_repeat	1	339	(0)	1537116
2159	20.1	3.2	1.9	chr16	86784309	86784769	(3553576)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1537235
471	26.8	3.1	10.7	chr16	87237827	87238077	(3100268)	+	LTR37B	LTR/ERV1	238	467	(1)	1538063
1374	21.9	2.6	5.1	chr16	87238244	87238599	(3099746)	C	MLT1A	LTR/ERVL-MaLR	(1)	373	27	1538065
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
14	15.8	0.0	5.1	chr16	87602069	87602107	(2736238)	+	(GGCGCGA)n	Simple_repeat	1	39	(0)	1538761
2073	15.2	0.0	0.3	chr16	87617881	87618190	(2720155)	+	AluJb	SINE/Alu	1	309	(3)	1538794
208	19.3	2.0	0.7	chr16	87700458	87700910	(2637435)	+	GA-rich	Low_complexity	1	462	(0)	1538927
8866	4.5	11.2	8.6	chr16	87718342	87719682	(2618663)	+	SVA_B	Retroposon/SVA	3	1382	(1)	1538936
295	25.8	6.8	1.7	chr16	87725561	87725675	(2612670)	+	L1ME3Cz	LINE/L1	175	271	(726)	1538942
224	31.9	15.5	2.1	chr16	87734468	87734707	(2603638)	C	L3	LINE/CR1	(349)	3750	3473	1538957
27	2.8	2.6	2.5	chr16	87765858	87765896	(2572449)	+	(GCCCTTCTT)n	Simple_repeat	1	40	(0)	1539014
2428	8.8	0.7	0.0	chr16	87792568	87792872	(2545473)	C	AluSx	SINE/Alu	(5)	307	1	1539078
1681	13.8	0.0	11.8	chr16	87792878	87793217	(2545128)	C	AluJo	SINE/Alu	(0)	312	13	1539079
13	7.8	3.5	3.3	chr16	87807261	87807289	(2531056)	+	(GGAG)n	Simple_repeat	1	30	(0)	1539109
275	30.4	21.7	2.6	chr16	88086514	88086858	(2251487)	+	L2	LINE/L2	1160	1588	(1831)	1539523
283	25.5	5.8	2.0	chr16	88088071	88088170	(2250175)	C	MIRc	SINE/MIR	(82)	186	83	1539524
13	21.4	0.0	6.1	chr16	88340747	88340795	(1997550)	+	G-rich	Low_complexity	1	49	(0)	1539830
187	27.6	11.0	3.7	chr16	88461834	88461942	(1876403)	C	MIR3	SINE/MIR	(43)	165	48	1539990
13	23.2	5.3	1.7	chr16	88474186	88474242	(1864103)	+	(CCCTGC)n	Simple_repeat	1	60	(0)	1540009
318	29.2	0.0	0.0	chr16	88476337	88476408	(1861937)	C	L2a	LINE/L2	(10)	3416	3345	1540010
1692	17.4	4.9	1.4	chr16	88620307	88620600	(1717745)	+	AluJr	SINE/Alu	1	305	(7)	1540224
17	22.9	0.0	2.1	chr16	88651055	88651102	(1687243)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1540272
15	17.5	5.5	3.5	chr16	88651103	88651109	(1687236)	+	(CCGGCC)n	Simple_repeat	1	58	(0)	1540273
11	9.1	2.3	11.1	chr16	88663355	88663398	(1674947)	+	(GGCGTC)n	Simple_repeat	1	45	(0)	1540289
26	22.1	2.9	1.4	chr16	88714228	88714297	(1624048)	+	(GT)n	Simple_repeat	1	72	(0)	1540352
379	28.3	2.3	1.3	chr16	88730125	88730305	(1608040)	+	L1MC4	LINE/L1	6695	6880	(1002)	1540365
2294	8.0	1.3	3.2	chr16	88730310	88730620	(1607725)	+	AluSx	SINE/Alu	1	305	(7)	1540366
1158	14.4	0.0	0.0	chr16	88774250	88774416	(1563929)	+	AluSz6	SINE/Alu	142	308	(4)	1540412
15	12.2	0.0	0.0	chr16	88803785	88803811	(1534534)	+	(CTTC)n	Simple_repeat	1	27	(0)	1540471
12	20.0	5.3	5.0	chr16	88820648	88820704	(1517641)	+	G-rich	Low_complexity	1	60	(0)	1540490
545	23.2	5.1	0.6	chr16	88855044	88855212	(1483133)	C	MER33	DNA/hAT-Charlie	(4)	320	144	1540525
15	26.5	4.3	1.4	chr16	88877658	88877726	(1460619)	+	(CCCCTC)n	Simple_repeat	1	72	(0)	1540543
58	19.9	3.0	3.0	chr16	88889267	88889430	(1448915)	+	G-rich	Low_complexity	1	169	(0)	1540557
209	32.1	11.0	0.0	chr16	89003510	89003590	(1334755)	+	MIRb	SINE/MIR	86	176	(92)	1540686
13	15.6	5.6	0.0	chr16	89003673	89003708	(1334637)	+	(CCAGGCC)n	Simple_repeat	1	38	(0)	1540687
1535	24.1	8.1	0.8	chr16	89327638	89328570	(1009775)	+	L1MD2	LINE/L1	4978	5879	(480)	1541082
13	21.1	0.0	2.5	chr16	89355203	89355242	(983103)	+	G-rich	Low_complexity	1	40	(0)	1541131
1853	13.2	9.1	0.0	chr16	89442985	89443264	(895081)	C	AluSz	SINE/Alu	(4)	308	1	1541263
1923	13.4	0.7	0.0	chr16	89559142	89559409	(778936)	C	AluSx	SINE/Alu	(16)	296	27	1541478
2438	7.6	0.0	0.0	chr16	89559438	89559739	(778606)	+	AluY	SINE/Alu	1	302	(9)	1541479
12	19.1	1.8	8.6	chr16	89632761	89632776	(705569)	+	G-rich	Low_complexity	1	14	(0)	1541583
956	19.6	0.0	0.6	chr16	89632777	89632939	(705406)	+	FRAM	SINE/Alu	1	162	(14)	1541584
17	15.3	0.0	2.6	chr16	89657993	89658030	(680315)	+	G-rich	Low_complexity	1	38	(0)	1541616
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
35	12.4	0.0	9.4	chr16	89694807	89694902	(643443)	+	(CCCGCG)n	Simple_repeat	1	96	(0)	1541691
359	34.0	12.8	1.9	chr16	89699978	89700193	(638152)	C	MIRb	SINE/MIR	(13)	255	13	1541695
181	23.8	12.5	0.0	chr16	89718416	89718478	(619867)	+	L2b	LINE/L2	3018	3089	(286)	1541722
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
12	30.4	1.2	5.8	chr16	89721182	89721266	(617079)	+	(CCCCCGC)n	Simple_repeat	1	86	(0)	1541726
23	15.9	1.3	7.9	chr16	89721474	89721548	(616797)	+	(CCCGC)n	Simple_repeat	1	76	(0)	1541727
37	16.8	1.3	1.3	chr16	89828931	89829007	(509338)	+	(CTCC)n	Simple_repeat	1	78	(0)	1541935
21	21.6	1.7	3.4	chr16	89833922	89833979	(504366)	+	(TG)n	Simple_repeat	1	59	(0)	1541943
16	10.0	4.0	7.7	chr16	89923322	89923398	(414947)	+	(GCCC)n	Simple_repeat	1	74	(0)	1542086
12	14.2	2.2	8.5	chr16	89923510	89923555	(414790)	+	(GCCCCGC)n	Simple_repeat	1	47	(0)	1542087
13	23.5	1.8	5.4	chr16	89972927	89972981	(365364)	+	(CCT)n	Simple_repeat	1	56	(0)	1542179
528	27.2	0.0	2.4	chr16	90020021	90020186	(318159)	C	L1MC5	LINE/L1	(67)	9237	9076	1542242
302	23.0	18.0	0.0	chr16	90022365	90022464	(315881)	C	L2a	LINE/L2	(2)	3424	3303	1542246
1042	16.9	0.6	0.0	chr17	411388	411553	(82845888)	+	FRAM	SINE/Alu	1	167	(9)	1545161
15	9.9	2.9	12.5	chr17	1229901	1229970	(82027471)	+	(CCGCC)n	Simple_repeat	1	72	(0)	1546623
4943	9.9	0.7	1.3	chr17	1240203	1240736	(82016705)	+	LTR8	LTR/ERV1	1	535	(156)	1546657
19	29.2	1.1	3.4	chr17	1491734	1491821	(81765620)	+	(GCCCC)n	Simple_repeat	1	89	(0)	1547244
11	21.7	0.0	4.9	chr17	1972487	1972527	(81284914)	+	(CCTTCAC)n	Simple_repeat	1	41	(0)	1548200
839	16.7	0.0	0.0	chr17	2174117	2174248	(81083193)	+	FLAM_C	SINE/Alu	1	132	(11)	1548604
36	6.8	0.0	0.0	chr17	2384581	2384627	(80872814)	+	(TGTG)n	Simple_repeat	1	47	(0)	1549004
13	29.8	0.0	0.0	chr17	2392861	2392905	(80864536)	+	G-rich	Low_complexity	1	45	(0)	1549013
15	29.9	4.1	0.0	chr17	2399596	2399668	(80857773)	+	(GGCCCG)n	Simple_repeat	1	76	(0)	1549021
3187	12.7	4.5	1.8	chr17	2484986	2485499	(80771942)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1549207
1860	8.5	1.3	0.4	chr17	2493151	2493385	(80764056)	C	AluY	SINE/Alu	(74)	237	1	1549226
2194	12.8	0.0	0.0	chr17	2493437	2493734	(80763707)	+	AluSz6	SINE/Alu	1	298	(14)	1549227
13	14.7	2.3	6.8	chr17	2749432	2749474	(80507967)	+	(GGCCG)n	Simple_repeat	1	44	(0)	1549846
2324	9.8	0.0	0.0	chr17	2784275	2784570	(80472871)	C	AluSx1	SINE/Alu	(16)	296	1	1549942
2290	9.7	0.0	2.8	chr17	2786626	2786946	(80470495)	C	AluSz	SINE/Alu	(0)	312	1	1549947
368	33.4	9.3	0.6	chr17	2798892	2799120	(80458321)	+	MIRc	SINE/MIR	11	264	(4)	1549971
278	25.0	5.5	7.7	chr17	2815055	2815184	(80442257)	C	MER5A	DNA/hAT-Charlie	(27)	162	36	1550010
1914	27.2	9.1	3.2	chr17	2975257	2975506	(80281935)	+	L1MEi	LINE/L1	2073	2387	(3759)	1550361
533	25.3	20.1	1.9	chr17	2975525	2975946	(80281495)	+	LTR79	LTR/ERVL	10	514	(13)	1550364
12	12.8	5.6	2.6	chr17	3530321	3530356	(79727085)	+	(CCTGGCC)n	Simple_repeat	1	38	(0)	1551201
164	18.0	3.1	3.3	chr17	3535129	3535541	(79721900)	+	(CCTTCCT)n	Simple_repeat	1	426	(0)	1551212
2035	14.8	0.6	0.3	chr17	3539372	3539682	(79717759)	+	AluJb	SINE/Alu	1	312	(0)	1551221
2350	9.9	0.0	0.0	chr17	3676780	3677082	(79580359)	+	AluSx1	SINE/Alu	1	303	(9)	1551494
13	18.9	0.0	0.0	chr17	3755133	3755162	(79502279)	+	(CGC)n	Simple_repeat	1	30	(0)	1551644
22	5.6	8.1	0.0	chr17	3888906	3888942	(79368499)	+	(GT)n	Simple_repeat	1	40	(0)	1551943
12	25.7	4.0	5.1	chr17	3892274	3892349	(79365092)	+	(GCACAC)n	Simple_repeat	1	79	(0)	1551949
12	23.1	0.0	4.5	chr17	3893402	3893445	(79363996)	+	(GGCGA)n	Simple_repeat	1	44	(0)	1551951
340	25.2	9.8	3.2	chr17	3917357	3917479	(79339962)	C	MIR3	SINE/MIR	(21)	187	56	1552004
12	17.7	4.0	5.8	chr17	3964604	3964653	(79292788)	+	G-rich	Low_complexity	1	52	(0)	1552093
199	26.8	4.0	2.7	chr17	4144300	4144372	(79113069)	C	L2b	LINE/L2	(35)	3340	3267	1552425
14	21.1	0.0	2.5	chr17	4366693	4366753	(78890688)	+	(CCCG)n	Simple_repeat	1	59	(0)	1552867
204	26.7	10.0	9.4	chr17	4511181	4511329	(78746112)	C	L2c	LINE/L2	(156)	3231	3082	1553236
278	28.5	7.7	5.3	chr17	4591634	4591785	(78665656)	C	MIR3	SINE/MIR	(50)	158	3	1553363
335	28.4	20.7	1.3	chr17	4719478	4719795	(78537646)	C	L2a	LINE/L2	(46)	3380	2985	1553601
14	19.7	3.7	8.2	chr17	4745677	4745758	(78511683)	+	(GCCCCTG)n	Simple_repeat	1	85	(0)	1553660
12	27.5	0.0	2.2	chr17	4745892	4745937	(78511504)	+	(CCCCCA)n	Simple_repeat	1	46	(0)	1553661
2078	8.6	4.9	0.0	chr17	4787554	4787822	(78469619)	C	AluSx1	SINE/Alu	(29)	283	1	1553783
11	30.5	0.0	2.0	chr17	4949901	4949950	(78307491)	+	(CGCCCCC)n	Simple_repeat	1	50	(0)	1554115
244	24.2	4.6	3.1	chr17	5419929	5419992	(77837449)	+	L2	LINE/L2	2380	2444	(975)	1555105
18	10.4	0.0	0.0	chr17	6444345	6444375	(76813066)	+	(GGGGCG)n	Simple_repeat	1	31	(0)	1557111
427	5.9	0.0	0.0	chr17	6444509	6444559	(76812882)	C	AluSp	SINE/Alu	(37)	276	226	1557112
274	18.4	0.0	0.0	chr17	6444520	6444568	(76812873)	+	SVA_C	Retroposon/SVA	336	384	(1000)	1557113
2402	7.3	0.7	0.3	chr17	6979083	6979385	(76278056)	+	AluY	SINE/Alu	1	304	(7)	1558017
182	35.9	3.5	8.2	chr17	7259262	7259443	(75997998)	C	L2c	LINE/L2	(10)	3377	3205	1558512
1790	16.4	1.3	1.0	chr17	7263603	7263906	(75993535)	C	AluJb	SINE/Alu	(7)	305	1	1558515
13	16.8	0.0	5.4	chr17	7336492	7336537	(75920904)	+	(CCGCC)n	Simple_repeat	1	43	(0)	1558635
374	22.0	7.0	0.8	chr17	7345979	7346102	(75911339)	C	MER91B	DNA/hAT-Tip100	(3315)	209	12	1558657
450	28.2	11.0	3.4	chr17	7349675	7349797	(75907644)	+	MIR	SINE/MIR	85	227	(35)	1558662
12	4.3	8.3	0.0	chr17	7352010	7352033	(75905408)	+	(CCAGT)n	Simple_repeat	1	26	(0)	1558666
13	15.2	0.0	3.2	chr17	7352094	7352124	(75905317)	+	G-rich	Low_complexity	1	31	(0)	1558667
232	30.5	3.6	9.9	chr17	7548612	7548822	(75708619)	+	MER21A	LTR/ERVL	114	310	(621)	1559064
11	22.0	2.2	4.3	chr17	7573782	7573827	(75683614)	+	(GCGAGG)n	Simple_repeat	1	47	(0)	1559097
501	33.9	10.4	3.9	chr17	7754991	7755760	(75501681)	C	L2	LINE/L2	(1756)	1663	838	1559456
894	10.2	3.3	0.0	chr17	7755809	7755926	(75501515)	C	AluSx3	SINE/Alu	(17)	294	173	1559460
24	23.4	0.0	0.0	chr17	7834033	7834092	(75423349)	+	(ACCCCGC)n	Simple_repeat	1	60	(0)	1559618
12	27.2	2.3	0.0	chr17	7841782	7841825	(75415616)	+	G-rich	Low_complexity	1	45	(0)	1559626
16	13.5	0.0	8.3	chr17	7887728	7887775	(75369666)	+	(CTCCGCC)n	Simple_repeat	1	48	(0)	1559705
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
735	28.5	9.5	3.0	chr17	7917100	7917334	(75340107)	+	MIR	SINE/MIR	11	262	(0)	1559741
37	31.4	2.3	2.3	chr17	8073428	8073598	(75183843)	+	G-rich	Low_complexity	1	175	(0)	1560040
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
2406	8.2	1.0	0.0	chr17	8247306	8247608	(75009833)	C	AluSz	SINE/Alu	(6)	306	1	1560402
1577	13.2	2.9	5.0	chr17	8288153	8288433	(74969008)	+	AluJb	SINE/Alu	1	275	(37)	1560486
14	11.6	0.0	3.3	chr17	8745929	8745958	(74511483)	+	(CTCC)n	Simple_repeat	1	30	(0)	1561383
14	29.6	0.0	3.3	chr17	8746014	8746074	(74511367)	+	G-rich	Low_complexity	1	61	(0)	1561384
221	31.2	16.9	3.8	chr17	9098371	9098686	(74158755)	+	MamRTE1	LINE/RTE-BovB	3413	3778	(34)	1562063
383	26.6	5.5	4.3	chr17	9144366	9144526	(74112915)	C	MIR	SINE/MIR	(98)	164	2	1562152
231	31.8	12.8	0.0	chr17	9144552	9144680	(74112761)	C	MIRb	SINE/MIR	(33)	235	88	1562153
11	21.4	1.5	9.1	chr17	9240273	9240337	(74017104)	+	G-rich	Low_complexity	1	66	(0)	1562292
12	7.4	0.0	11.1	chr17	9645481	9645516	(73611925)	+	(GCCCC)n	Simple_repeat	1	36	(0)	1563113
250	28.6	14.2	5.0	chr17	10099018	10099157	(73158284)	+	MIR3	SINE/MIR	27	181	(27)	1564030
1031	28.0	9.9	7.5	chr17	10292713	10293203	(72964238)	+	MLT1K	LTR/ERVL-MaLR	82	585	(10)	1564470
4579	13.6	4.3	4.0	chr17	14117521	14118317	(69139124)	C	LTR1A1	LTR/ERV1	(0)	799	1	1570940
23	6.9	1.9	7.4	chr17	16000038	16000090	(67257351)	+	G-rich	Low_complexity	1	54	(0)	1574054
8446	8.1	1.9	5.3	chr17	16144880	16146306	(67111135)	+	SVA_B	Retroposon/SVA	1	1377	(6)	1574280
15	22.1	0.0	5.7	chr17	16381261	16381313	(66876128)	+	G-rich	Low_complexity	1	53	(0)	1574858
397	30.9	13.3	1.2	chr17	16980990	16981426	(66276015)	+	L2a	LINE/L2	2902	3373	(2)	1575871
209	24.3	5.3	0.6	chr17	16990835	16991512	(66265929)	+	(CA)n	Simple_repeat	1	714	(0)	1575890
258	17.4	0.0	0.0	chr17	17041885	17041930	(66215511)	+	MIR	SINE/MIR	107	152	(110)	1576014
184	16.1	0.0	0.0	chr17	17042008	17042038	(66215403)	+	L2a	LINE/L2	3326	3356	(19)	1576012
2295	16.8	2.1	1.6	chr17	17109947	17110376	(66147065)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1576082
2407	5.5	0.7	0.0	chr17	17300471	17300760	(65956681)	C	AluSp	SINE/Alu	(21)	292	1	1576392
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
15	13.5	0.0	12.7	chr17	17303826	17303888	(65953553)	+	(CCCCG)n	Simple_repeat	1	63	(0)	1576401
31	13.7	0.0	8.2	chr17	17496276	17496404	(65761037)	+	G-rich	Low_complexity	1	118	(0)	1576770
15	26.4	4.8	0.0	chr17	17496441	17496503	(65760938)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1576771
17	30.7	1.3	2.5	chr17	17591331	17591409	(65666032)	+	(ACACGC)n	Simple_repeat	1	80	(0)	1576913
17	17.5	2.6	0.0	chr17	17681398	17681436	(65576005)	+	(CCGC)n	Simple_repeat	1	40	(0)	1577150
1766	9.8	13.1	0.4	chr17	17745431	17745696	(65511745)	C	AluSx	SINE/Alu	(7)	305	1	1577268
249	28.5	12.6	7.3	chr17	17745697	17745873	(65511568)	C	L2c	LINE/L2	(567)	2852	2651	1577266
19	24.3	2.8	2.7	chr17	17752330	17752400	(65505041)	+	(GGCGG)n	Simple_repeat	1	73	(0)	1577284
411	28.7	12.7	10.9	chr17	17818475	17818822	(65438619)	+	L2a	LINE/L2	3023	3377	(49)	1577401
2349	8.4	0.3	2.9	chr17	17825600	17825910	(65431531)	C	AluSx	SINE/Alu	(4)	308	6	1577413
416	25.0	12.7	3.9	chr17	18007158	18007365	(65250076)	+	MIRb	SINE/MIR	33	261	(7)	1577769
292	31.0	2.1	8.4	chr17	18258056	18258210	(64999231)	C	MIR1_Amn	SINE/MIR	(25)	205	61	1578234
662	26.7	9.2	1.9	chr17	18857720	18857887	(64399554)	C	MIRb	SINE/MIR	(65)	203	22	1579271
19	17.4	5.7	4.0	chr17	19004715	19004784	(64252657)	+	(GGCGGC)n	Simple_repeat	1	74	(0)	1579595
684	37.7	3.7	4.2	chr17	19011017	19011426	(64246015)	C	L2b	LINE/L2	(0)	3375	2968	1579606
205	28.8	2.7	5.2	chr17	19377611	19377687	(63879754)	+	L2b	LINE/L2	3300	3374	(1)	1580482
183	38.3	1.7	2.5	chr17	21379863	21379980	(61877461)	C	MIRb	SINE/MIR	(37)	231	115	1584171
738	27.4	5.1	2.8	chr17	27245528	27245775	(56011666)	+	LTR79	LTR/ERVL	274	527	(0)	1586370
287	32.1	8.1	1.9	chr17	27648011	27648172	(55609269)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1587197
4094	24.5	6.6	5.8	chr17	28111953	28112643	(55144798)	C	L1M4a2	LINE/L1	(1946)	710	2	1588093
1755	18.9	0.6	4.7	chr17	28266938	28267298	(54990143)	+	HERV-Fc1_LTR1	LTR/ERV1	1	346	(0)	1588361
13	12.2	8.3	0.0	chr17	28371488	28371523	(54885918)	+	G-rich	Low_complexity	1	39	(0)	1588527
209	32.9	3.8	0.0	chr17	28407364	28407439	(54850002)	+	MIRc	SINE/MIR	96	174	(94)	1588609
2187	10.5	2.6	0.3	chr17	28535468	28535763	(54721678)	+	AluSx	SINE/Alu	1	303	(9)	1588867
2262	10.1	1.0	0.7	chr17	28809072	28809369	(54448072)	+	AluSx	SINE/Alu	1	299	(13)	1589372
17	25.1	0.0	4.8	chr17	28897639	28897700	(54359741)	+	(CGCC)n	Simple_repeat	1	62	(0)	1589579
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
396	26.6	10.7	0.0	chr17	28972597	28972705	(54284736)	+	L3	LINE/CR1	3976	4097	(2)	1589687
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
2051	14.5	0.7	0.0	chr17	29553317	29553620	(53703821)	C	AluSx	SINE/Alu	(6)	306	1	1590924
1354	7.2	0.0	0.0	chr17	29553668	29553834	(53703607)	+	AluYc	SINE/Alu	124	290	(9)	1590925
12	28.7	0.0	3.7	chr17	29567464	29567517	(53689924)	+	(GCCCC)n	Simple_repeat	1	54	(0)	1590950
13	17.0	3.0	0.0	chr17	29589693	29589725	(53667716)	+	(CCCCG)n	Simple_repeat	1	34	(0)	1590971
13	25.9	3.2	3.1	chr17	29589778	29589840	(53667601)	+	(GGCCGC)n	Simple_repeat	1	65	(0)	1590972
2249	11.7	1.0	0.0	chr17	30735338	30735637	(52521804)	+	AluSz6	SINE/Alu	1	303	(9)	1593151
13	31.0	0.0	0.0	chr17	31457549	31457596	(51799845)	+	G-rich	Low_complexity	1	48	(0)	1594610
195	33.3	9.2	1.0	chr17	31558703	31558802	(51698639)	C	MIRb	SINE/MIR	(36)	232	124	1594821
2660	4.3	0.0	0.0	chr17	32319141	32319444	(50937997)	+	AluY	SINE/Alu	1	304	(7)	1596555
950	14.0	10.9	0.6	chr17	32357646	32357802	(50899639)	C	AluSz6	SINE/Alu	(4)	308	134	1596641
1842	12.7	8.3	0.4	chr17	32357803	32358078	(50899363)	C	AluSx	SINE/Alu	(11)	301	2	1596642
18	19.1	3.7	7.1	chr17	32486611	32486692	(50770749)	+	(GGCG)n	Simple_repeat	1	85	(0)	1596915
17	12.9	4.3	4.2	chr17	32519391	32519436	(50738005)	+	GA-rich	Low_complexity	1	48	(0)	1596957
18	29.4	2.5	1.2	chr17	32519470	32519549	(50737892)	+	(GGCGGC)n	Simple_repeat	1	82	(0)	1596958
2422	13.0	5.7	2.0	chr17	34570408	34570815	(48686626)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	1600663
21	7.6	0.0	0.0	chr17	34613147	34613174	(48644267)	+	(CT)n	Simple_repeat	1	28	(0)	1600741
39	2.7	0.0	0.0	chr17	34613175	34613212	(48644229)	+	(AC)n	Simple_repeat	1	38	(0)	1600742
25	21.1	5.3	0.0	chr17	34980634	34980709	(48276732)	+	(CGCGG)n	Simple_repeat	1	80	(0)	1601461
18	23.6	0.0	0.0	chr17	35587383	35587428	(47670013)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	1602448
17	20.3	0.0	5.4	chr17	38869952	38870007	(44387434)	+	(CGTGCC)n	Simple_repeat	1	56	(0)	1608780
1763	15.9	6.5	0.3	chr17	38883116	38883405	(44374036)	+	AluJb	SINE/Alu	1	309	(3)	1608803
5285	11.7	0.3	1.5	chr17	39016164	39016552	(44240889)	C	LTR1C	LTR/ERV1	(358)	389	1	1609129
3290	12.5	4.4	3.2	chr17	39016553	39016935	(44240506)	+	MER21A	LTR/ERVL	529	921	(10)	1609126
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
377	31.5	10.4	2.2	chr17	39177683	39177867	(44079574)	C	MIR3	SINE/MIR	(3)	205	4	1609485
1879	15.0	2.9	1.9	chr17	39178376	39178682	(44078759)	C	AluJr4	SINE/Alu	(2)	310	1	1609486
303	33.1	4.4	3.0	chr17	39178706	39178839	(44078602)	C	MIRb	SINE/MIR	(0)	268	133	1609487
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
15	18.3	0.0	2.6	chr17	39461980	39462018	(43795423)	+	G-rich	Low_complexity	1	39	(0)	1610149
22	20.8	1.8	0.0	chr17	39663978	39664032	(43593409)	+	(CTGC)n	Simple_repeat	1	56	(0)	1610549
435	25.0	17.4	0.6	chr17	39664058	39664234	(43593207)	+	MIRb	SINE/MIR	50	262	(6)	1610550
13	6.8	9.7	0.0	chr17	39668189	39668221	(43589220)	+	G-rich	Low_complexity	1	36	(0)	1610553
333	22.6	5.1	0.5	chr17	39719650	39719745	(43537696)	+	MIRc	SINE/MIR	115	216	(14)	1610654
1044	6.9	0.0	0.8	chr17	39731243	39731372	(43526069)	C	AluSz	SINE/Alu	(181)	131	3	1610672
195	31.0	6.5	3.9	chr17	39731500	39731603	(43525838)	C	MIRb	SINE/MIR	(39)	229	123	1610673
20	8.8	2.8	0.0	chr17	39951088	39951123	(43306318)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1611064
2412	13.9	1.8	0.3	chr17	39955623	39955997	(43301444)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1611072
1685	15.1	10.0	12.5	chr17	39955998	39956232	(43301209)	+	LTR47A2	LTR/ERVL	140	362	(70)	1611071
2545	5.4	0.0	0.0	chr17	40014082	40014378	(43243063)	+	AluY	SINE/Alu	1	297	(14)	1611197
20	19.5	3.2	3.1	chr17	40072559	40072620	(43184821)	+	(AGAC)n	Simple_repeat	1	64	(0)	1611301
185	30.3	7.0	8.3	chr17	40102953	40103096	(43154345)	+	Tigger19b	DNA/TcMar-Tigger	118	259	(291)	1611353
16	13.7	0.0	2.9	chr17	40121986	40122019	(43135422)	+	(GGC)n	Simple_repeat	1	34	(0)	1611391
20	26.4	5.1	1.9	chr17	40122194	40122291	(43135150)	+	G-rich	Low_complexity	1	103	(0)	1611392
14	29.7	0.0	1.8	chr17	40123125	40123179	(43134262)	+	(ACCCCC)n	Simple_repeat	1	55	(0)	1611394
14	4.9	0.0	0.0	chr17	40123315	40123335	(43134106)	+	(CAG)n	Simple_repeat	1	21	(0)	1611395
12	17.0	8.3	1.9	chr17	40219255	40219302	(43038139)	+	(TCTCTCC)n	Simple_repeat	1	52	(0)	1611611
37	4.9	0.0	0.0	chr17	40219363	40219405	(43038036)	+	(GGC)n	Simple_repeat	1	43	(0)	1611612
13	9.1	8.1	2.5	chr17	40341938	40341977	(42915464)	+	(TTCCTCC)n	Simple_repeat	1	42	(0)	1611855
19	30.7	2.2	2.1	chr17	40342076	40342166	(42915275)	+	G-rich	Low_complexity	1	93	(0)	1611856
21	11.4	0.0	4.7	chr17	40480593	40480635	(42776806)	+	(CGTG)n	Simple_repeat	1	43	(0)	1612137
12	14.9	3.3	0.0	chr17	40491698	40491727	(42765714)	+	G-rich	Low_complexity	1	31	(0)	1612160
282	30.2	1.9	2.8	chr17	41511089	41511197	(41746244)	C	MIR3	SINE/MIR	(32)	176	69	1613733
203	35.4	0.0	1.2	chr17	41737904	41737986	(41519455)	+	L2b	LINE/L2	3289	3370	(5)	1614170
12	7.5	6.7	3.1	chr17	41786139	41786168	(41471273)	+	G-rich	Low_complexity	1	32	(0)	1614291
12	20.3	0.0	9.3	chr17	41919182	41919235	(41338206)	+	G-rich	Low_complexity	1	54	(0)	1614562
361	27.3	12.0	0.0	chr17	41919798	41919907	(41337534)	C	MER94B	DNA/hAT-Blackjack	(6)	127	3	1614563
13	0.0	0.0	8.0	chr17	42050479	42050503	(41206938)	+	(CCGC)n	Simple_repeat	1	25	(0)	1614843
415	32.5	3.6	0.6	chr17	42362382	42362542	(40894899)	+	L2a	LINE/L2	2722	2887	(532)	1615458
716	24.0	2.9	6.0	chr17	42362549	42362765	(40894676)	+	MIR	SINE/MIR	32	241	(21)	1615459
20	12.1	0.0	0.0	chr17	42422440	42422475	(40834966)	+	(CCACC)n	Simple_repeat	1	36	(0)	1615600
1730	17.4	3.1	1.4	chr17	42531260	42531546	(40725895)	C	AluJo	SINE/Alu	(19)	293	2	1615831
390	25.8	3.1	2.4	chr17	42531657	42531783	(40725658)	+	MIR3	SINE/MIR	15	142	(66)	1615832
430	28.7	0.8	1.6	chr17	42536759	42536882	(40720559)	+	MIRb	SINE/MIR	67	189	(79)	1615846
1227	13.2	0.0	4.9	chr17	42559049	42559252	(40698189)	C	AluSx	SINE/Alu	(117)	195	2	1615891
539	25.4	12.2	11.7	chr17	42559253	42559283	(40698158)	C	MSTD	LTR/ERVL-MaLR	(312)	84	72	1615890
1628	15.5	1.0	4.0	chr17	42559284	42559586	(40697855)	+	AluJo	SINE/Alu	2	295	(17)	1615892
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
2339	9.8	0.0	0.0	chr17	42633374	42633669	(40623772)	+	AluSx1	SINE/Alu	1	296	(16)	1616031
20	6.5	3.0	0.0	chr17	42675094	42675126	(40582315)	+	(CCCTCC)n	Simple_repeat	1	34	(0)	1616127
27	14.6	1.9	0.0	chr17	42678337	42678389	(40579052)	+	G-rich	Low_complexity	1	54	(0)	1616134
393	26.7	4.8	11.3	chr17	42678934	42679136	(40578305)	C	L3	LINE/CR1	(25)	4074	3886	1616136
38	21.3	9.5	0.6	chr17	42682577	42682724	(40574717)	+	GA-rich	Low_complexity	1	162	(0)	1616146
618	18.8	17.7	0.0	chr17	42744395	42744538	(40512903)	C	MER96	DNA/hAT-Tip100	(0)	175	1	1616275
13	27.5	1.9	1.8	chr17	42744733	42744786	(40512655)	+	(CCCCGC)n	Simple_repeat	1	55	(0)	1616276
13	15.5	9.3	0.0	chr17	42745050	42745095	(40512346)	+	(GCGCCCC)n	Simple_repeat	1	50	(0)	1616277
291	27.4	1.9	7.0	chr17	42980327	42980440	(40277001)	+	L2a	LINE/L2	3314	3421	(5)	1616804
2274	10.3	0.7	0.0	chr17	42993868	42994157	(40263284)	C	AluSx1	SINE/Alu	(20)	292	1	1616835
15	34.5	0.0	0.0	chr17	43025143	43025204	(40232237)	+	G-rich	Low_complexity	1	62	(0)	1616905
381	30.2	6.5	11.8	chr17	43388857	43389213	(39868228)	+	L2c	LINE/L2	3050	3386	(1)	1617686
47	0.0	0.0	0.0	chr17	43458182	43458221	(39799220)	+	(TG)n	Simple_repeat	1	40	(0)	1617881
71	5.8	0.0	0.0	chr17	43458223	43458312	(39799129)	+	(GA)n	Simple_repeat	1	90	(0)	1617882
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
375	32.6	4.0	8.8	chr17	43616831	43616879	(39640562)	C	MIRc	SINE/MIR	(3)	265	220	1618246
2156	25.6	9.3	3.1	chr17	43616880	43617172	(39640269)	+	MER115	DNA/hAT-Tip100	4	307	(386)	1618247
192	28.6	9.7	6.2	chr17	43656212	43656420	(39601021)	C	L2c	LINE/L2	(239)	3148	2932	1618338
15	29.9	0.0	0.0	chr17	44138450	44138488	(39118953)	+	(CA)n	Simple_repeat	1	39	(0)	1619307
14	14.9	5.4	0.0	chr17	44199251	44199287	(39058154)	+	(GCCCC)n	Simple_repeat	1	39	(0)	1619429
22	26.2	1.5	0.0	chr17	44199420	44199431	(39058010)	+	(CCCCGC)n	Simple_repeat	1	32	(37)	1619430
848	27.7	17.8	3.8	chr17	44203344	44204076	(39053365)	C	L2a	LINE/L2	(0)	3426	2537	1619440
18	4.8	0.0	0.0	chr17	44218595	44218616	(39038825)	+	(A)n	Simple_repeat	1	22	(0)	1619460
19	26.0	0.0	1.6	chr17	44219046	44219071	(39038370)	+	(CCCCCG)n	Simple_repeat	1	57	(0)	1619461
12	12.0	0.0	6.5	chr17	44219072	44219102	(39038339)	+	(GCCCC)n	Simple_repeat	1	31	(0)	1619462
346	32.4	0.0	0.9	chr17	44361704	44361812	(38895629)	C	MIRb	SINE/MIR	(58)	210	103	1619782
12	16.6	0.0	0.0	chr17	44374972	44374998	(38882443)	+	(CCCCA)n	Simple_repeat	1	27	(0)	1619808
476	18.6	1.0	2.9	chr17	44690379	44690483	(38566958)	C	MIRb	SINE/MIR	(36)	232	130	1620502
2100	9.2	5.8	0.3	chr17	44690485	44690620	(38566821)	+	AluSx	SINE/Alu	1	136	(176)	1620503
408	13.5	10.8	0.0	chr17	44693618	44693691	(38563750)	C	L1MB2	LINE/L1	(2)	6169	6087	1620511
2067	13.2	0.3	2.6	chr17	44693770	44694073	(38563368)	+	AluSz6	SINE/Alu	1	297	(15)	1620512
288	24.5	15.4	7.0	chr17	44709764	44709891	(38547550)	C	L1MEh	LINE/L1	(298)	1937	1811	1620558
2500	7.0	0.0	0.0	chr17	44709892	44710191	(38547250)	+	AluSc8	SINE/Alu	1	300	(11)	1620559
1890	8.6	11.3	0.0	chr17	44939810	44940076	(38317365)	C	AluSz	SINE/Alu	(7)	305	5	1621019
48	22.8	1.8	0.0	chr17	45127720	45127831	(38129610)	+	(GT)n	Simple_repeat	1	114	(0)	1621401
15	23.3	0.0	0.0	chr17	45228978	45229017	(38028424)	+	GA-rich	Low_complexity	1	40	(0)	1621646
213	22.5	16.8	5.3	chr17	45229530	45229623	(38027818)	+	L2c	LINE/L2	3280	3386	(1)	1621647
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
1124	23.3	4.5	1.9	chr17	47790566	47790932	(35466509)	C	HAL1	LINE/L1	(1277)	1230	854	1626744
1768	15.3	0.0	2.7	chr17	47888224	47888523	(35368918)	C	AluSx3	SINE/Alu	(18)	293	2	1626892
250	29.0	2.5	1.3	chr17	47888572	47888673	(35368768)	+	MIR3	SINE/MIR	59	161	(107)	1626893
16	28.6	1.7	0.0	chr17	48053193	48053251	(35204190)	+	G-rich	Low_complexity	1	60	(0)	1627194
101	8.1	2.0	0.7	chr17	48647022	48647169	(34610272)	+	(GA)n	Simple_repeat	1	151	(0)	1628176
13	28.3	1.8	1.7	chr17	48647332	48647388	(34610053)	+	G-rich	Low_complexity	1	58	(0)	1628177
14	16.1	2.1	6.2	chr17	48817324	48817370	(34440071)	+	(CAGCC)n	Simple_repeat	1	48	(0)	1628551
40	23.0	0.0	1.1	chr17	48878963	48879055	(34378386)	+	(CCAT)n	Simple_repeat	1	93	(0)	1628712
755	31.2	3.6	10.1	chr17	48879206	48879622	(34377819)	C	L2c	LINE/L2	(1)	3386	2998	1628713
2019	13.4	2.9	0.0	chr17	48954012	48954346	(34303095)	C	LTR47B4	LTR/ERVL	(89)	345	1	1628907
981	14.4	0.6	1.2	chr17	48954347	48954515	(34302926)	C	ERVL47-int	LTR/ERVL	(0)	5246	5079	1628907
798	10.4	0.9	0.0	chr17	48954520	48954634	(34302807)	C	ERVL47-int	LTR/ERVL	(2625)	2621	2506	1628907
385	29.9	5.1	6.2	chr17	48974097	48974274	(34283167)	+	MIRc	SINE/MIR	2	177	(91)	1628953
28	24.1	3.0	2.9	chr17	49016759	49016857	(34240584)	+	(CCTG)n	Simple_repeat	1	102	(0)	1629036
12	10.7	6.7	0.0	chr17	49016897	49016926	(34240515)	+	(CTCCCC)n	Simple_repeat	1	32	(0)	1629037
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
97	0.0	1.0	2.9	chr17	49228225	49228326	(34029115)	+	(CCTT)n	Simple_repeat	1	103	(0)	1629467
437	28.8	10.5	5.8	chr17	49247967	49248413	(34009028)	C	L2b	LINE/L2	(3)	3372	2814	1629524
18	6.7	0.0	5.7	chr17	49471217	49471251	(33786190)	+	(GGGCA)n	Simple_repeat	1	35	(0)	1630006
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
262	34.8	9.2	0.0	chr17	49861547	49861684	(33395757)	C	MIRb	SINE/MIR	(83)	185	34	1630708
16	32.5	1.7	0.0	chr17	50101572	50101629	(33155812)	+	(CA)n	Simple_repeat	1	59	(0)	1631162
191	22.7	0.9	0.2	chr17	50166647	50167074	(33090367)	+	(CA)n	Simple_repeat	1	432	(0)	1631272
2038	8.6	9.3	2.1	chr17	50174807	50175096	(33082345)	C	AluSq2	SINE/Alu	(0)	313	1	1631282
15	12.5	2.6	5.0	chr17	50274336	50274374	(32983067)	+	(CCTC)n	Simple_repeat	1	40	(0)	1631445
333	31.8	17.4	0.4	chr17	50372550	50372811	(32884630)	+	L2a	LINE/L2	3111	3426	(0)	1631650
920	22.6	10.2	4.6	chr17	50443368	50443692	(32813749)	C	Arthur1C	DNA/hAT-Tip100	(0)	363	19	1631794
1288	10.1	1.1	0.0	chr17	50452513	50452691	(32804750)	+	L1PA10	LINE/L1	5988	6168	(0)	1631817
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
2334	6.1	0.7	4.5	chr17	50727824	50728134	(32529307)	+	AluY	SINE/Alu	1	299	(12)	1632330
226	35.9	2.3	6.6	chr17	50768324	50768469	(32488972)	C	MIR3	SINE/MIR	(48)	160	12	1632397
15	28.4	1.6	1.6	chr17	50865613	50865673	(32391768)	+	(GCCCC)n	Simple_repeat	1	62	(0)	1632610
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
25	21.8	2.0	3.4	chr17	51120737	51120828	(32136613)	+	G-rich	Low_complexity	1	90	(0)	1633161
489	25.6	12.2	3.4	chr17	51121167	51121344	(32136097)	C	MIRc	SINE/MIR	(18)	250	55	1633163
1735	16.9	1.6	5.4	chr17	51225333	51225646	(32031795)	C	AluJb	SINE/Alu	(0)	312	11	1633383
313	22.9	2.0	1.4	chr17	51225647	51225752	(32031689)	C	FLAM_C	SINE/Alu	(91)	211	1	1633384
896	10.7	0.0	11.3	chr17	51225749	51225785	(32031656)	+	AluJo	SINE/Alu	1	27	(285)	1633385
2415	10.9	0.0	0.0	chr17	51225786	51226078	(32031363)	C	AluSx	SINE/Alu	(19)	293	1	1633386
1702	17.5	6.0	0.6	chr17	51334985	51335329	(31922112)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1633574
280	32.0	0.8	3.9	chr17	51703430	51703556	(31553885)	+	MIRc	SINE/MIR	96	218	(50)	1634250
215	34.2	5.8	4.0	chr17	54901720	54901871	(28355570)	+	MIRb	SINE/MIR	13	167	(101)	1638731
28	16.9	4.7	3.4	chr17	55421919	55422003	(27835438)	+	(CCTCCCG)n	Simple_repeat	1	89	(0)	1639593
12	10.2	0.0	10.3	chr17	55422139	55422177	(27835264)	+	G-rich	Low_complexity	1	39	(0)	1639594
4224	13.9	4.9	7.8	chr17	55458351	55459213	(27798228)	+	LTR1A2	LTR/ERV1	1	837	(0)	1639679
657	32.6	2.8	0.4	chr17	55495155	55495397	(27762044)	C	Chap1_Mam	DNA/hAT-Charlie	(93)	249	1	1639745
1337	15.5	5.3	6.9	chr17	55495508	55495797	(27761644)	+	AluJo	SINE/Alu	1	285	(27)	1639746
1723	14.0	8.0	0.0	chr17	56798863	56799174	(26458267)	C	MSTB1	LTR/ERVL-MaLR	(99)	333	1	1642005
4591	12.8	4.2	0.6	chr17	56799175	56799891	(26457550)	C	L1MC1	LINE/L1	(265)	6068	5325	1642003
397	27.6	12.2	0.2	chr17	57522644	57522809	(25734632)	C	MIR3	SINE/MIR	(34)	174	3	1643417
935	22.0	4.1	11.1	chr17	57524002	57524343	(25733098)	C	MLT1H	LTR/ERVL-MaLR	(180)	369	53	1643419
1810	16.5	3.2	0.0	chr17	57949565	57949863	(25307578)	C	AluJb	SINE/Alu	(0)	312	1	1644183
892	23.2	6.0	4.8	chr17	57949877	57950107	(25307334)	+	MIR	SINE/MIR	19	252	(10)	1644184
16	17.2	2.6	0.0	chr17	57956653	57956691	(25300750)	+	(TCTCCTC)n	Simple_repeat	1	40	(0)	1644191
240	41.8	5.9	1.3	chr17	58387991	58388218	(24869223)	C	MamRTE1	LINE/RTE-BovB	(2798)	1014	776	1644916
16	18.8	2.3	2.2	chr17	58531913	58531956	(24725485)	+	(CGCC)n	Simple_repeat	1	45	(0)	1645151
15	22.1	2.0	2.0	chr17	58532085	58532133	(24725308)	+	G-rich	Low_complexity	1	50	(0)	1645152
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
5602	9.5	3.5	2.8	chr17	59290107	59290917	(23966524)	C	LTR5_Hs	LTR/ERVK	(151)	817	1	1646915
2461	13.6	5.5	3.0	chr17	59318557	59319065	(23938376)	+	MLT2A2	LTR/ERVL	1	547	(7)	1646993
12	26.1	1.9	3.6	chr17	59331480	59331533	(23925908)	+	(GGCG)n	Simple_repeat	1	55	(0)	1647025
3395	25.7	8.3	1.1	chr17	60037040	60038031	(23219410)	C	L1MD2	LINE/L1	(5514)	1126	54	1648461
1003	11.8	0.0	2.2	chr17	60088541	60088676	(23168765)	+	FLAM_C	SINE/Alu	1	133	(10)	1648551
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
2472	14.4	4.7	1.2	chr17	60423863	60424271	(22833170)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	1649227
15	5.6	0.0	0.0	chr17	62628029	62628047	(20629394)	+	(GT)n	Simple_repeat	1	19	(0)	1653392
1823	7.9	0.4	0.0	chr17	62648122	62648348	(20609093)	+	AluSz	SINE/Alu	1	228	(84)	1653440
308	27.6	6.2	1.3	chr17	62704597	62704772	(20552669)	+	MER5A	DNA/hAT-Charlie	6	178	(0)	1653551
20	30.2	0.0	0.0	chr17	62808189	62808250	(20449191)	+	(CTC)n	Simple_repeat	1	62	(0)	1653722
14	17.3	12.3	1.2	chr17	63438415	63438487	(19818954)	+	(CCCACG)n	Simple_repeat	1	82	(0)	1654709
12	24.4	3.2	4.6	chr17	63476878	63476940	(19780501)	+	(CCCAGC)n	Simple_repeat	1	65	(0)	1654786
12	14.0	0.0	8.1	chr17	63476982	63477018	(19780423)	+	G-rich	Low_complexity	1	37	(0)	1654787
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
35	23.7	0.0	1.1	chr17	63774202	63774288	(19483153)	+	(GGC)n	Simple_repeat	1	87	(0)	1655334
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
14	17.3	0.0	6.7	chr17	65137401	65137445	(18119996)	+	(CCCGC)n	Simple_repeat	1	45	(0)	1658063
16	23.3	0.0	0.0	chr17	65515816	65515850	(17741591)	+	A-rich	Low_complexity	1	35	(0)	1658833
29	2.9	0.0	2.7	chr17	65561686	65561722	(17695719)	+	(CGCCC)n	Simple_repeat	1	37	(0)	1658891
13	18.9	2.8	0.0	chr17	65561838	65561873	(17695568)	+	(CTCCTGC)n	Simple_repeat	1	37	(0)	1658892
385	31.4	12.1	0.6	chr17	66509020	66509134	(16748307)	C	MLT1H2	LTR/ERVL-MaLR	(290)	199	63	1660382
2577	18.6	5.4	3.5	chr17	66509135	66509163	(16748278)	C	MLT2B4	LTR/ERVL	(0)	556	528	1660383
2577	18.6	5.4	3.5	chr17	66509210	66509724	(16747717)	C	MLT2B4	LTR/ERVL	(29)	527	2	1660383
385	31.4	12.1	0.6	chr17	66509725	66509784	(16747657)	C	MLT1H2	LTR/ERVL-MaLR	(427)	62	1	1660382
334	27.4	1.2	0.0	chr17	66509821	66509904	(16747537)	+	L2b	LINE/L2	3291	3375	(0)	1660385
12	18.8	2.6	2.6	chr17	66964084	66964121	(16293320)	+	(GGCCT)n	Simple_repeat	1	39	(0)	1661141
388	20.5	0.0	7.4	chr17	67021216	67021283	(16236158)	C	L2a	LINE/L2	(21)	3405	3339	1661253
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
17	30.2	1.1	4.4	chr17	68247975	68248063	(15009378)	+	(GGCGC)n	Simple_repeat	1	90	(0)	1663830
1080	25.2	9.8	2.9	chr17	72345082	72345414	(10912027)	C	MLT1I	LTR/ERVL-MaLR	(47)	364	1	1670224
2137	12.8	0.3	1.3	chr17	73308753	73309058	(9948383)	+	AluSx	SINE/Alu	1	303	(9)	1672048
17	11.7	5.4	0.0	chr17	74196799	74196835	(9060606)	+	(CCCACG)n	Simple_repeat	1	39	(0)	1673672
2124	8.2	6.9	0.0	chr17	74207520	74207801	(9049640)	C	AluSq	SINE/Alu	(6)	307	5	1673692
12	19.9	5.0	0.0	chr17	74369319	74369358	(8888083)	+	(GCCCCT)n	Simple_repeat	1	42	(0)	1674020
38	2.8	0.0	0.0	chr17	74455124	74455160	(8802281)	+	(CA)n	Simple_repeat	1	37	(0)	1674187
15	17.8	6.7	0.0	chr17	74748450	74748494	(8508947)	+	(CGCCG)n	Simple_repeat	1	48	(0)	1674751
28	23.7	1.4	0.0	chr17	74776580	74776653	(8480788)	+	(GTCGG)n	Simple_repeat	1	75	(0)	1674793
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
16	3.3	9.7	0.0	chr17	74878278	74878308	(8379133)	+	(AGGGCC)n	Simple_repeat	1	34	(0)	1674926
2251	9.6	0.0	0.0	chr17	74929409	74929725	(8327716)	C	AluSx	SINE/Alu	(0)	312	1	1675013
311	24.1	2.5	3.7	chr17	74929727	74929808	(8327633)	+	L2c	LINE/L2	3307	3387	(0)	1675014
216	30.3	2.7	9.2	chr17	74929781	74929900	(8327541)	C	L2b	LINE/L2	(10)	3365	3254	1675015
2405	10.2	0.0	0.0	chr17	74929901	74930204	(8327237)	+	AluSq2	SINE/Alu	1	304	(9)	1675016
243	39.3	2.4	0.8	chr17	74937694	74937816	(8319625)	C	L2c	LINE/L2	(6)	3381	3257	1675030
11	21.3	8.2	0.0	chr17	74937935	74937983	(8319458)	+	(GGAGGCA)n	Simple_repeat	1	53	(0)	1675031
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
184	32.1	4.5	3.5	chr17	75096176	75096262	(8161179)	C	MIR3	SINE/MIR	(55)	153	66	1675340
2129	11.1	3.3	0.0	chr17	75110681	75110977	(8146464)	+	AluSq2	SINE/Alu	1	307	(6)	1675367
3278	14.0	4.8	0.5	chr17	75347185	75347743	(7909698)	+	LTR27C	LTR/ERV1	1	584	(183)	1675913
2170	9.8	0.0	5.0	chr17	75349509	75349825	(7907616)	C	AluSx1	SINE/Alu	(10)	302	2	1675916
2048	11.1	0.3	3.9	chr17	75368216	75368521	(7888920)	C	AluSg4	SINE/Alu	(14)	296	2	1675965
1909	14.2	1.3	4.4	chr17	75368527	75368843	(7888598)	C	AluJb	SINE/Alu	(3)	309	3	1675966
13	19.6	0.0	6.5	chr17	75525604	75525649	(7731792)	+	(GGCGCCG)n	Simple_repeat	1	46	(0)	1676298
876	13.4	0.0	3.2	chr17	75548771	75548850	(7708591)	C	MER34C2	LTR/ERV1	(475)	80	1	1676342
246	32.2	6.9	2.4	chr17	75548892	75549019	(7708422)	C	MIRb	SINE/MIR	(33)	229	98	1676347
662	26.9	6.6	2.5	chr17	75578696	75578897	(7678544)	+	MIRb	SINE/MIR	38	248	(20)	1676399
13	21.7	0.0	2.6	chr17	75721317	75721355	(7536086)	+	(CGGCCC)n	Simple_repeat	1	39	(0)	1676647
21	9.5	0.0	0.0	chr17	75844781	75844814	(7412627)	+	(GTGGG)n	Simple_repeat	1	34	(0)	1676868
418	21.4	2.0	0.0	chr17	75869504	75869601	(7387840)	+	Tigger7	DNA/TcMar-Tigger	2389	2488	(3)	1676924
12	6.2	4.9	9.3	chr17	75878098	75878138	(7379303)	+	(AGGC)n	Simple_repeat	1	43	(0)	1676937
20	18.1	3.3	3.2	chr17	75878650	75878709	(7378732)	+	(CCGC)n	Simple_repeat	1	62	(0)	1676939
275	29.7	2.8	9.2	chr17	75881693	75881844	(7375597)	C	L2b	LINE/L2	(187)	3188	3047	1676949
2568	5.0	0.0	0.0	chr17	75896053	75896353	(7361088)	C	AluY	SINE/Alu	(9)	302	2	1676983
4073	14.7	4.6	2.1	chr17	75983539	75984239	(7273202)	C	LTR8A	LTR/ERV1	(0)	727	9	1677161
14	8.4	0.0	3.7	chr17	76005848	76005874	(7251567)	+	(GGAG)n	Simple_repeat	1	27	(0)	1677216
2118	9.5	4.4	0.0	chr17	76133273	76133557	(7123884)	+	AluSz	SINE/Alu	1	298	(14)	1677448
11	9.5	11.8	0.0	chr17	76136552	76136585	(7120856)	+	(CAGCTA)n	Simple_repeat	1	38	(0)	1677456
333	27.8	2.8	7.0	chr17	76453495	76453703	(6803738)	C	L2b	LINE/L2	(10)	3416	3210	1678056
202	29.8	4.0	4.8	chr17	76557890	76558010	(6699431)	+	MIR	SINE/MIR	96	216	(52)	1678274
12	18.1	2.4	4.8	chr17	76585911	76585951	(6671490)	+	(CCCG)n	Simple_repeat	1	42	(0)	1678331
490	13.2	0.0	0.0	chr17	76636549	76636616	(6620825)	+	Alu	SINE/Alu	226	293	(18)	1678430
5439	2.9	1.3	0.0	chr17	76636619	76637285	(6620156)	+	SVA_B	Retroposon/SVA	708	1383	(0)	1678431
222	27.4	18.2	4.4	chr17	76700627	76700992	(6556449)	C	L2a	LINE/L2	(18)	3408	2981	1678570
1884	21.6	9.0	0.2	chr17	76772817	76773304	(6484137)	C	L1MEc	LINE/L1	(5635)	765	231	1678713
195	33.3	2.0	5.0	chr17	77066685	77066785	(6190656)	+	MIRb	SINE/MIR	50	147	(121)	1679362
317	36.4	6.5	1.1	chr17	77155090	77155278	(6102163)	+	L2c	LINE/L2	2277	2476	(943)	1679566
20	22.1	0.0	0.0	chr17	77155294	77155341	(6102100)	+	(ACAC)n	Simple_repeat	1	48	(0)	1679567
409	34.5	8.7	2.9	chr17	77389568	77389839	(5867602)	C	L3b	LINE/CR1	(6)	5226	4938	1679977
1277	17.7	17.6	0.9	chr17	77833331	77833660	(5423781)	C	MLT1A1	LTR/ERVL-MaLR	(1)	407	11	1680719
213	36.6	15.3	1.8	chr17	77833662	77833825	(5423616)	+	L3	LINE/CR1	3833	4022	(77)	1680715
1999	11.4	2.8	0.7	chr17	78161588	78161867	(5095574)	+	AluSz	SINE/Alu	27	312	(0)	1681304
429	38.1	1.5	6.6	chr17	78161871	78161993	(5095448)	C	MIRb	SINE/MIR	(49)	219	104	1681305
2183	13.3	0.7	0.0	chr17	78161994	78162293	(5095148)	+	AluSx1	SINE/Alu	1	302	(10)	1681306
19	20.8	1.5	5.8	chr17	78168588	78168655	(5088786)	+	(GCG)n	Simple_repeat	1	69	(0)	1681320
324	25.5	6.4	0.0	chr17	78239488	78239589	(5017852)	C	MIR3	SINE/MIR	(39)	169	61	1681469
20	26.2	4.4	4.2	chr17	78352946	78352958	(4904483)	+	(GCGGCC)n	Simple_repeat	1	22	(96)	1681715
21	14.8	0.0	4.1	chr17	78352959	78353007	(4904434)	+	G-rich	Low_complexity	1	49	(0)	1681716
14	26.5	0.0	3.8	chr17	78360287	78360339	(4897102)	+	(GCG)n	Simple_repeat	1	53	(0)	1681727
18	23.6	1.6	3.1	chr17	78484799	78484861	(4772580)	+	(CGCCC)n	Simple_repeat	1	64	(0)	1681917
242	32.2	1.3	7.5	chr17	78528664	78528824	(4728617)	+	MamRep488	DNA/hAT-Tip100	1	151	(68)	1681981
2347	11.6	0.0	0.0	chr17	78542145	78542447	(4714994)	C	AluSq2	SINE/Alu	(10)	303	1	1682006
1070	19.0	2.4	0.0	chr17	78624791	78624995	(4632446)	C	MER2	DNA/TcMar-Tigger	(0)	345	136	1682159
801	7.9	0.0	0.0	chr17	78625033	78625133	(4632308)	+	AluSz	SINE/Alu	2	102	(210)	1682160
459	18.2	2.5	0.0	chr17	78625146	78625222	(4632219)	C	MER2	DNA/TcMar-Tigger	(266)	79	1	1682159
59	0.0	0.0	0.0	chr17	78718219	78718268	(4539173)	+	(AC)n	Simple_repeat	1	50	(0)	1682320
2355	9.3	0.0	1.0	chr17	78961326	78961626	(4295815)	+	AluSp	SINE/Alu	2	299	(14)	1682768
645	15.8	0.0	0.0	chr17	79171653	79171747	(4085694)	C	AluJo	SINE/Alu	(203)	109	15	1683078
587	16.3	0.0	0.0	chr17	79171743	79171828	(4085613)	C	AluJb	SINE/Alu	(225)	87	2	1683079
2415	9.6	0.0	0.6	chr17	79171890	79172202	(4085239)	+	AluSx	SINE/Alu	1	311	(1)	1683080
13	28.0	0.0	0.0	chr17	79370299	79370341	(3887100)	+	(CAGAGC)n	Simple_repeat	1	43	(0)	1683345
248	30.1	9.3	3.6	chr17	79424998	79425282	(3832159)	+	L2b	LINE/L2	2809	3124	(251)	1683404
12	12.2	3.7	0.0	chr17	79428271	79428297	(3829144)	+	(GTGAG)n	Simple_repeat	1	28	(0)	1683408
15	25.4	4.0	3.9	chr17	79508375	79508449	(3748992)	+	(CCGC)n	Simple_repeat	1	78	(0)	1683516
1434	21.2	9.8	1.6	chr17	79700652	79701025	(3556416)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1683780
14	13.6	0.0	5.6	chr17	79707220	79707255	(3550186)	+	(CCCCT)n	Simple_repeat	1	36	(0)	1683787
12	21.2	1.8	7.0	chr17	79830463	79830518	(3426923)	+	G-rich	Low_complexity	1	57	(0)	1684001
1686	15.7	5.9	0.0	chr17	79845960	79846296	(3411145)	C	L1MB3	LINE/L1	(7)	6176	5819	1684020
2208	11.1	0.7	1.3	chr17	79869686	79869991	(3387450)	C	AluSz	SINE/Alu	(8)	304	1	1684074
3212	23.2	5.2	1.4	chr17	79907611	79908468	(3348973)	C	MER45B	DNA/hAT-Tip100	(42)	998	107	1684153
13	19.8	6.5	0.0	chr17	79911885	79911893	(3345548)	+	(GCCCTCC)n	Simple_repeat	1	25	(24)	1684162
13	7.2	6.5	3.0	chr17	79911894	79911924	(3345517)	+	(CCTCCG)n	Simple_repeat	1	33	(0)	1684163
13	19.8	6.5	0.0	chr17	79911925	79911930	(3345511)	+	(GCCCTCC)n	Simple_repeat	26	49	(0)	1684162
13	9.7	5.4	5.1	chr17	79929642	79929678	(3327763)	+	G-rich	Low_complexity	1	39	(0)	1684190
16	11.2	10.0	1.8	chr17	79991350	79991399	(3266042)	+	(GAGGCT)n	Simple_repeat	1	55	(0)	1684257
24	16.6	0.0	0.0	chr17	79991691	79991738	(3265703)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1684259
14	21.5	2.2	2.2	chr17	80480867	80480911	(2776530)	+	GA-rich	Low_complexity	1	46	(0)	1685072
225	37.0	3.9	1.0	chr17	80483071	80483272	(2774169)	C	L2c	LINE/L2	(801)	2618	2411	1685075
1427	26.9	9.3	6.4	chr17	80599750	80600483	(2656958)	+	MLT1G3-int	LTR/ERVL-MaLR	186	941	(468)	1685292
614	18.0	15.0	0.0	chr17	81002433	81002720	(2254721)	C	MSTD	LTR/ERVL-MaLR	(7)	389	1	1685761
32	5.3	0.0	0.0	chr17	81004171	81004209	(2253232)	+	(GCCCA)n	Simple_repeat	1	39	(0)	1685766
18	12.2	0.0	0.0	chr17	81087377	81087403	(2170038)	+	(GT)n	Simple_repeat	1	27	(0)	1685850
59	0.0	0.0	0.0	chr17	81093079	81093131	(2164310)	+	(CTGGG)n	Simple_repeat	1	53	(0)	1685857
19	15.3	0.0	0.0	chr17	81115467	81115503	(2141938)	+	(CCCGC)n	Simple_repeat	1	37	(0)	1685868
26	0.0	0.0	0.0	chr17	81125020	81125044	(2132397)	+	(GGCAGG)n	Simple_repeat	1	25	(0)	1685877
13	32.8	0.0	0.0	chr17	81125060	81125112	(2132329)	+	G-rich	Low_complexity	1	53	(0)	1685878
15	3.6	3.1	6.1	chr17	81142766	81142797	(2114644)	+	(CCCAGC)n	Simple_repeat	1	33	(0)	1685901
313	31.0	16.1	1.1	chr17	81204378	81204661	(2052780)	+	HAL1	LINE/L1	616	950	(1557)	1685975
1076	24.3	6.1	0.0	chr17	81238279	81238616	(2018825)	+	MER67B	LTR/ERV1	1	360	(301)	1686023
90	21.5	1.0	0.5	chr17	81336302	81336498	(1920943)	+	(CACC)n	Simple_repeat	1	199	(0)	1686137
12	11.6	3.3	3.2	chr17	81515029	81515058	(1742383)	+	G-rich	Low_complexity	1	31	(0)	1686354
13	13.2	6.7	4.2	chr17	81815717	81815761	(1441680)	+	(CCCTCTG)n	Simple_repeat	1	48	(0)	1686762
1466	15.4	0.4	10.9	chr17	81815885	81816195	(1441246)	C	AluJb	SINE/Alu	(14)	298	21	1686763
2428	8.6	0.3	0.0	chr17	81916461	81916763	(1340678)	C	AluSq4	SINE/Alu	(6)	305	2	1686904
299	36.0	12.6	3.2	chr17	81916853	81917156	(1340285)	+	L2c	LINE/L2	3021	3325	(50)	1686905
15	14.9	2.6	2.5	chr17	81960543	81960581	(1296860)	+	G-rich	Low_complexity	1	40	(0)	1686967
570	24.4	9.9	0.0	chr17	81984597	81984760	(1272681)	C	MLT1F1	LTR/ERVL-MaLR	(56)	513	332	1687016
159	30.4	1.3	1.1	chr17	81984771	81985304	(1272137)	+	(AC)n	Simple_repeat	1	541	(0)	1687017
284	23.5	6.7	4.8	chr17	82022202	82022304	(1235137)	+	MIR	SINE/MIR	46	150	(112)	1687053
12	21.6	0.0	0.0	chr17	82047583	82047614	(1209827)	+	(ACACGC)n	Simple_repeat	1	32	(0)	1687084
2368	10.1	0.7	0.0	chr17	82094509	82094816	(1162625)	+	AluY	SINE/Alu	1	310	(1)	1687133
469	17.1	27.9	0.0	chr17	82206285	82206488	(1050953)	+	MER21A	LTR/ERVL	1	264	(667)	1687329
2013	16.0	8.5	8.2	chr17	82206496	82206807	(1050634)	+	MER21A	LTR/ERVL	378	711	(220)	1687329
14	9.6	2.6	7.5	chr17	82231194	82231234	(1026207)	+	(CCCG)n	Simple_repeat	1	38	(0)	1687366
276	30.8	10.7	1.5	chr17	82297597	82297731	(959710)	+	Looper	DNA/PiggyBac	812	960	(597)	1687448
1685	7.4	2.8	0.0	chr17	82367747	82367988	(889453)	C	LTR71B	LTR/ERV1	(0)	610	362	1687533
603	13.1	0.0	0.0	chr17	82367985	82368083	(889358)	C	LTR71B	LTR/ERV1	(150)	460	362	1687534
1604	23.8	10.8	1.2	chr17	82450996	82451574	(805867)	+	L1MC5	LINE/L1	8131	8771	(533)	1687655
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
298	22.8	5.0	5.4	chr17	82539095	82539354	(718087)	+	AluSx	SINE/Alu	1	170	(132)	1687843
701	23.7	13.9	6.7	chr17	82597986	82598262	(659179)	C	L1MA5A	LINE/L1	(4)	6293	5988	1687941
766	16.5	4.7	0.0	chr17	82598268	82598388	(659053)	C	AluJr	SINE/Alu	(185)	127	1	1687942
701	23.7	13.9	6.7	chr17	82598389	82598408	(659033)	C	L1MA5A	LINE/L1	(310)	5987	5971	1687941
370	24.4	1.1	0.0	chr17	82598467	82598556	(658885)	C	MSTD	LTR/ERVL-MaLR	(9)	387	297	1687943
704	23.3	8.6	3.0	chr17	83186141	83186370	(71071)	+	MLT1D	LTR/ERVL-MaLR	1	244	(261)	1688649
1589	23.6	9.0	2.4	chr18	3120198	3120704	(77252581)	+	MLT1E1	LTR/ERVL-MaLR	106	649	(5)	1693807
299	15.8	6.6	0.0	chr18	3261648	3261704	(77111581)	C	MER53	DNA/hAT	(130)	63	3	1694047
2736	29.8	2.7	2.8	chr18	3296459	3297771	(77075514)	+	L1PB3	LINE/L1	3	1313	(5550)	1694111
705	28.6	12.9	3.1	chr18	5517996	5518650	(74854635)	+	L2a	LINE/L2	2694	3426	(0)	1697327
90	32.7	0.0	0.7	chr18	6729310	6729597	(73643688)	+	(AC)n	Simple_repeat	1	288	(0)	1698977
12	32.0	1.9	0.0	chr18	8478856	8478909	(71894376)	+	GA-rich	Low_complexity	1	55	(0)	1701430
338	22.7	2.7	6.0	chr18	8478967	8479119	(71894166)	+	MIR	SINE/MIR	22	160	(102)	1701431
2514	7.1	0.0	0.7	chr18	9868064	9868371	(70504914)	C	AluYj4	SINE/Alu	(5)	306	1	1703775
5374	7.7	3.7	0.6	chr18	9868372	9868701	(70504584)	C	L1PA8	LINE/L1	(396)	5776	5422	1703774
551	22.5	2.8	3.5	chr18	10243336	10243478	(70129807)	+	MLT1J	LTR/ERVL-MaLR	1	142	(370)	1704303
15	9.6	2.7	5.3	chr18	10731375	10731411	(69641874)	+	(CACC)n	Simple_repeat	1	38	(0)	1704909
1819	15.4	0.3	0.7	chr18	11994093	11994391	(68378894)	+	AluJr	SINE/Alu	1	298	(14)	1706752
13	28.8	0.0	4.7	chr18	12377343	12377406	(67995879)	+	G-rich	Low_complexity	1	64	(0)	1707303
691	7.0	0.0	1.2	chr18	12868652	12868737	(67504548)	+	AluYi6	SINE/Alu	1	85	(226)	1708259
512	12.1	0.0	0.0	chr18	12868736	12868801	(67504484)	C	AluSx	SINE/Alu	(245)	67	2	1708260
21	14.0	0.0	2.0	chr18	12868846	12868867	(67504418)	+	(ATTTTAA)n	Simple_repeat	1	21	(0)	1708261
15	4.8	0.0	0.0	chr18	12948064	12948085	(67425200)	+	(CGC)n	Simple_repeat	1	22	(0)	1708433
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
13	22.5	3.1	6.1	chr18	21741298	21741361	(58631924)	+	(CCG)n	Simple_repeat	1	66	(0)	1713218
1773	14.2	0.4	0.0	chr18	22110169	22110429	(58262856)	+	AluSz6	SINE/Alu	51	312	(0)	1713958
582	28.6	3.4	7.0	chr18	22110430	22110463	(58262822)	+	MIRb	SINE/MIR	199	222	(46)	1713957
22	18.8	5.1	3.7	chr18	22169335	22169412	(58203873)	+	(CTCCC)n	Simple_repeat	1	82	(0)	1714086
13	15.9	8.6	5.3	chr18	22177132	22177201	(58196084)	+	(CCGGCC)n	Simple_repeat	1	76	(0)	1714095
13	18.6	0.0	8.0	chr18	22348614	22348663	(58024622)	+	(CCGGCC)n	Simple_repeat	1	50	(0)	1714416
6690	12.9	6.2	5.6	chr18	22815807	22817076	(57556209)	C	MER52C	LTR/ERV1	(0)	1278	1	1715049
2557	5.8	0.0	0.0	chr18	23101564	23101858	(57271427)	+	AluY	SINE/Alu	6	300	(11)	1715610
491	23.9	7.1	0.0	chr18	23106021	23106137	(57267148)	+	MIRb	SINE/MIR	22	147	(121)	1715620
218	13.9	2.7	0.0	chr18	23143428	23143463	(57229822)	+	MIRb	SINE/MIR	133	169	(99)	1715698
562	21.8	3.1	0.0	chr18	23143519	23143642	(57229643)	+	MER58A	DNA/hAT-Charlie	39	166	(58)	1715699
2188	12.0	2.9	0.0	chr18	23489479	23489778	(56883507)	C	AluSz	SINE/Alu	(3)	309	1	1716307
2522	8.2	0.0	0.0	chr18	23489870	23490175	(56883110)	+	AluY	SINE/Alu	1	306	(5)	1716308
13	14.4	3.2	0.0	chr18	23586439	23586469	(56786816)	+	(GCAGGA)n	Simple_repeat	1	32	(0)	1716472
24	9.9	0.0	4.3	chr18	23586972	23587018	(56786267)	+	(GGCGG)n	Simple_repeat	1	47	(0)	1716473
1025	17.2	0.0	0.0	chr18	23690652	23690825	(56682460)	C	AluJr	SINE/Alu	(53)	259	86	1716685
286	9.5	0.0	0.4	chr18	23690827	23690867	(56682418)	C	AluSx	SINE/Alu	(52)	250	211	1716686
13	24.3	5.7	0.0	chr18	23884900	23884952	(56488333)	+	G-rich	Low_complexity	1	56	(0)	1717002
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
2925	18.8	6.6	6.6	chr18	24964129	24964810	(55408475)	C	LTR8A	LTR/ERV1	(12)	715	34	1718748
6439	21.5	11.3	2.8	chr18	26261500	26262477	(54110808)	C	L1M4b	LINE/L1	(5694)	1173	119	1720606
14	21.5	2.2	2.2	chr18	26549018	26549062	(53824223)	+	G-rich	Low_complexity	1	46	(0)	1721100
11	24.8	4.5	4.3	chr18	26549165	26549231	(53824054)	+	(CGGCGG)n	Simple_repeat	1	70	(0)	1721101
15	17.5	0.0	0.0	chr18	26863449	26863480	(53509805)	+	(CCCG)n	Simple_repeat	1	32	(0)	1721618
345	33.7	9.1	4.3	chr18	28159143	28159517	(52213768)	+	LTR79	LTR/ERVL	125	519	(8)	1723389
2122	11.8	0.7	0.7	chr18	30982508	30982796	(49390489)	C	AluSz	SINE/Alu	(23)	289	1	1727044
13	22.6	0.0	4.4	chr18	31042994	31043038	(49330247)	+	(CCCCG)n	Simple_repeat	1	45	(0)	1727133
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
1087	6.7	0.0	4.0	chr18	32017986	32018135	(48355150)	C	AluSz	SINE/Alu	(167)	145	2	1728648
1871	15.5	0.4	1.1	chr18	32259481	32259745	(48113540)	C	AluJb	SINE/Alu	(16)	296	34	1729121
321	5.1	11.4	0.0	chr18	32259753	32259791	(48113494)	+	AluYk11	SINE/Alu	1	44	(267)	1729122
188	32.8	0.0	0.0	chr18	32612882	32612939	(47760346)	+	L2c	LINE/L2	3282	3339	(48)	1729637
31	15.7	1.1	6.7	chr18	32770644	32770732	(47602553)	+	G-rich	Low_complexity	1	90	(0)	1729865
802	19.4	0.7	0.7	chr18	34115335	34115478	(46257807)	C	AluJr4	SINE/Alu	(48)	264	121	1731533
1292	23.3	3.9	0.7	chr18	34115500	34115874	(46257411)	+	LTR9A1	LTR/ERV1	263	779	(0)	1731532
588	30.6	13.5	1.6	chr18	35610227	35610538	(44762747)	+	L2a	LINE/L2	3059	3413	(13)	1733582
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
214	27.5	11.5	5.8	chr18	46322376	46322514	(34050771)	C	MamTip2	DNA/hAT-Tip100	(154)	151	4	1748449
26	29.6	3.7	0.0	chr18	46433519	46433625	(33939660)	+	G-rich	Low_complexity	1	111	(0)	1748644
19	12.8	0.0	0.0	chr18	47931271	47931304	(32441981)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1751016
13	14.8	2.4	4.8	chr18	48036383	48036423	(32336862)	+	G-rich	Low_complexity	1	42	(0)	1751209
12	17.0	1.8	8.9	chr18	48049947	48050001	(32323284)	+	(CCAGCCT)n	Simple_repeat	1	56	(0)	1751236
13	11.6	0.0	6.2	chr18	48161947	48161978	(32211307)	+	(GGCCC)n	Simple_repeat	1	32	(0)	1751435
201	16.7	2.7	15.3	chr18	48300451	48300535	(32072750)	C	MIR3	SINE/MIR	(47)	161	88	1751656
337	28.2	9.7	3.7	chr18	48315477	48315612	(32057673)	+	MIR1_Amn	SINE/MIR	14	158	(72)	1751690
28	11.3	1.5	6.1	chr18	48539080	48539144	(31834141)	+	(CCTC)n	Simple_repeat	1	66	(0)	1752077
461	24.8	18.1	3.9	chr18	48807321	48807568	(31565717)	C	L1ME4a	LINE/L1	(4)	6374	6088	1752469
611	26.2	1.8	1.2	chr18	48814274	48814435	(31558850)	+	MER5B	DNA/hAT-Charlie	3	165	(13)	1752476
285	22.7	1.7	3.5	chr18	48814487	48814576	(31558709)	+	MIR	SINE/MIR	77	173	(57)	1752477
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
13	25.2	0.0	2.3	chr18	48922815	48922858	(31450427)	+	(CGCCC)n	Simple_repeat	1	44	(0)	1752680
4220	7.0	1.4	3.2	chr18	48961621	48961744	(31411541)	C	MER41A	LTR/ERV1	(0)	554	444	1752728
2335	8.6	0.0	1.0	chr18	48961745	48962048	(31411237)	+	AluSc8	SINE/Alu	1	301	(10)	1752729
14	21.9	2.0	3.9	chr18	48963767	48963817	(31409468)	+	(CACTC)n	Simple_repeat	1	52	(0)	1752730
19	16.4	5.2	3.3	chr18	48976165	48976222	(31397063)	+	(GGC)n	Simple_repeat	1	61	(0)	1752763
356	18.0	0.0	0.0	chr18	48998550	48998610	(31374675)	C	MER5B	DNA/hAT-Charlie	(0)	178	118	1752804
2141	11.0	0.3	0.0	chr18	49006125	49006425	(31366860)	C	AluSg	SINE/Alu	(8)	302	1	1752822
225	28.3	3.2	0.0	chr18	49006457	49006516	(31366769)	C	MIRc	SINE/MIR	(112)	156	95	1752823
3111	11.3	6.7	9.1	chr18	49529301	49529739	(30843546)	+	MER4B	LTR/ERV1	183	608	(2)	1753728
3159	17.5	6.0	6.4	chr18	49529740	49530196	(30843089)	+	MER4-int	LTR/ERV1	1526	1966	(4632)	1753719
2725	13.7	4.2	0.0	chr18	50183673	50184110	(30189175)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	1754737
1365	10.2	5.6	3.0	chr18	50239949	50240192	(30133093)	+	LTR10F	LTR/ERV1	1	300	(309)	1754836
562	6.9	7.5	0.0	chr18	50240164	50240250	(30133035)	+	LTR10F	LTR/ERV1	104	197	(314)	1754837
1990	12.7	4.7	2.8	chr18	50240276	50240651	(30132634)	+	LTR10F	LTR/ERV1	104	590	(43)	1754838
483	36.2	3.2	2.2	chr18	58041518	58041791	(22331494)	C	L4_B_Mam	LINE/RTE-X	(206)	4735	4459	1766692
13	17.2	4.9	2.3	chr18	58044093	58044133	(22329152)	+	(CCGC)n	Simple_repeat	1	43	(0)	1766702
727	23.1	10.9	6.2	chr18	58788709	58789092	(21584193)	C	MLT1H	LTR/ERVL-MaLR	(54)	495	92	1767858
650	26.3	11.6	2.9	chr18	59048353	59048775	(21324510)	C	L2a	LINE/L2	(240)	3186	2721	1768352
13	20.4	2.4	2.4	chr18	59359415	59359455	(21013830)	+	G-rich	Low_complexity	1	42	(0)	1768822
729	10.8	8.4	0.8	chr18	59512129	59512249	(20861036)	+	LTR1A2	LTR/ERV1	7	137	(700)	1769068
1641	14.4	0.0	0.8	chr18	59512237	59512488	(20860797)	+	LTR1A2	LTR/ERV1	588	837	(0)	1769068
785	27.6	4.3	1.5	chr18	59898255	59898522	(20474763)	C	MER102b	DNA/hAT-Charlie	(9)	332	57	1769749
11	15.8	6.5	4.1	chr18	59899637	59899682	(20473603)	+	(CCACTC)n	Simple_repeat	1	49	(0)	1769752
11	26.0	0.0	5.8	chr18	62526814	62526865	(17846420)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1773603
13	28.1	0.0	4.9	chr18	63422145	63422205	(16951080)	+	(CTTCTCC)n	Simple_repeat	1	61	(0)	1775046
2033	9.7	6.4	0.0	chr18	63458210	63458488	(16914797)	+	AluSz	SINE/Alu	2	299	(13)	1775116
20	16.1	0.0	5.6	chr18	63476874	63476927	(16896358)	+	G-rich	Low_complexity	1	54	(0)	1775150
36	2.9	0.0	0.0	chr18	74281744	74281778	(6091507)	+	(TG)n	Simple_repeat	1	35	(0)	1789676
20	0.0	0.0	0.0	chr18	74281822	74281843	(6091442)	+	(GT)n	Simple_repeat	1	22	(0)	1789677
12	13.2	5.7	2.7	chr18	74496247	74496281	(5877004)	+	(GTGGC)n	Simple_repeat	1	37	(0)	1789971
18	15.5	0.0	0.0	chr18	75088358	75088387	(5284898)	+	(T)n	Simple_repeat	1	30	(0)	1790612
16	24.2	3.3	1.6	chr18	75209091	75209150	(5164135)	+	(GCTCG)n	Simple_repeat	1	62	(0)	1790758
735	8.6	1.8	4.3	chr18	76405240	76405356	(3967929)	C	FRAM	SINE/Alu	(22)	154	41	1792110
19	11.7	4.0	3.9	chr18	76822895	76822944	(3550341)	+	G-rich	Low_complexity	1	52	(0)	1792732
5734	11.8	1.4	0.4	chr18	76964843	76966065	(3407220)	C	L1PB1	LINE/L1	(4526)	2337	1098	1792915
1192	13.5	0.0	4.6	chr18	76966066	76966259	(3407026)	C	L1PB1	LINE/L1	(6426)	436	252	1792915
309	10.1	2.9	0.0	chr18	79172336	79172397	(1200888)	C	AluSx	SINE/Alu	(234)	67	1	1795267
309	10.1	2.9	0.0	chr18	79172398	79172459	(1200826)	C	AluSx	SINE/Alu	(234)	67	1	1795268
346	9.1	0.0	0.0	chr18	79172468	79172522	(1200763)	C	Alu	SINE/Alu	(78)	55	1	1795269
300	10.1	2.8	1.7	chr18	79172523	79172585	(1200700)	C	AluSx	SINE/Alu	(234)	67	1	1795270
334	10.9	7.2	0.0	chr18	79172586	79172643	(1200642)	C	Alu	SINE/Alu	(235)	66	4	1795271
1193	21.6	10.2	1.6	chr18	80147834	80148209	(225076)	+	MER66B	LTR/ERV1	74	485	(1)	1796204
16	7.0	3.1	3.0	chr18	80254002	80254033	(119252)	+	(GGGATG)n	Simple_repeat	1	33	(0)	1796328
7182	7.1	2.7	0.0	chr18	80257324	80258281	(115004)	C	LTR13	LTR/ERVK	(0)	1007	23	1796336
20	27.0	2.5	2.5	chr19	409167	409245	(58208371)	+	(CCG)n	Simple_repeat	1	81	(0)	1796873
562	26.1	7.3	1.6	chr19	480035	480279	(58137337)	C	L2b	LINE/L2	(195)	3180	2921	1796988
2359	9.7	0.3	0.0	chr19	527818	528125	(58089491)	C	AluSp	SINE/Alu	(3)	310	2	1797089
434	20.1	0.0	0.0	chr19	528144	528240	(58089376)	+	FRAM	SINE/Alu	2	99	(34)	1797090
1914	17.0	0.7	0.0	chr19	528283	528570	(58089046)	+	AluSz	SINE/Alu	1	290	(22)	1797091
2292	7.3	0.0	3.8	chr19	570144	570458	(58047158)	C	AluSg7	SINE/Alu	(6)	303	1	1797170
3983	11.0	4.2	4.0	chr19	570459	570617	(58046999)	C	HERVIP10B3-int	LTR/ERV1	(6429)	1174	999	1797168
18	20.6	3.9	0.0	chr19	614023	614073	(58003543)	+	G-rich	Low_complexity	1	53	(0)	1797231
24	34.1	1.8	1.7	chr19	639443	639555	(57978061)	+	(CT)n	Simple_repeat	1	115	(0)	1797276
29	24.9	4.6	2.9	chr19	639556	639565	(57978051)	+	(TCTCTG)n	Simple_repeat	47	136	(0)	1797275
34	0.0	0.0	0.0	chr19	675682	675710	(57941906)	+	(CA)n	Simple_repeat	1	29	(0)	1797347
13	16.1	0.0	0.0	chr19	751181	751208	(57866408)	+	G-rich	Low_complexity	1	28	(0)	1797520
315	26.0	5.8	0.7	chr19	817853	817957	(57799659)	+	MIR	SINE/MIR	93	197	(65)	1797654
2206	13.5	0.0	0.0	chr19	818101	818412	(57799204)	+	AluSx	SINE/Alu	1	312	(0)	1797655
307	23.1	7.1	0.0	chr19	944135	944212	(57673404)	C	L2b	LINE/L2	(18)	3357	3274	1797940
29	15.9	0.0	0.0	chr19	944326	944374	(57673242)	+	(GT)n	Simple_repeat	1	49	(0)	1797941
13	20.9	4.3	2.0	chr19	944891	944937	(57672679)	+	(TCTCTG)n	Simple_repeat	1	49	(0)	1797943
843	25.3	5.4	5.7	chr19	958903	959139	(57658477)	+	Tigger3a	DNA/TcMar-Tigger	88	324	(24)	1797973
529	25.9	7.8	5.8	chr19	959116	959268	(57658348)	+	MLT1D	LTR/ERVL-MaLR	190	376	(129)	1797975
406	23.9	3.7	6.1	chr19	1007384	1007548	(57610068)	+	MER20	DNA/hAT-Charlie	1	161	(58)	1798068
864	12.9	0.0	0.8	chr19	1027393	1027524	(57590092)	+	FLAM_C	SINE/Alu	1	131	(12)	1798102
247	32.6	0.0	0.0	chr19	1028116	1028201	(57589415)	C	MIRc	SINE/MIR	(140)	128	43	1798103
15	24.6	1.9	1.9	chr19	1028682	1028743	(57588873)	+	G-rich	Low_complexity	1	62	(0)	1798104
1764	13.5	0.0	8.3	chr19	1069817	1069979	(57547637)	C	AluJo	SINE/Alu	(12)	300	139	1798169
1770	14.8	4.9	0.0	chr19	1217202	1217471	(57400145)	C	AluJb	SINE/Alu	(0)	312	29	1798430
197	36.8	2.2	3.6	chr19	1247433	1247533	(57370083)	+	L2c	LINE/L2	3078	3176	(211)	1798457
12	13.9	6.2	0.0	chr19	1249461	1249492	(57368124)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1798466
24	16.6	0.0	0.0	chr19	1257396	1257436	(57360180)	+	(T)n	Simple_repeat	1	41	(0)	1798472
11	14.8	4.9	4.7	chr19	1261060	1261100	(57356516)	+	(AGCGCGG)n	Simple_repeat	1	43	(0)	1798477
15	16.3	0.0	2.8	chr19	1269087	1269122	(57348494)	+	(GCCCC)n	Simple_repeat	1	36	(0)	1798484
2301	10.4	0.0	0.0	chr19	1277778	1278074	(57339542)	C	AluSq2	SINE/Alu	(16)	297	1	1798492
210	30.8	6.0	0.0	chr19	1291026	1291103	(57326513)	C	MIR1_Amn	SINE/MIR	(79)	151	69	1798507
241	18.1	10.8	5.7	chr19	1292406	1292493	(57325123)	C	L2b	LINE/L2	(1)	3374	3282	1798508
315	26.3	18.9	0.0	chr19	1292546	1292743	(57324873)	C	L2b	LINE/L2	(339)	3080	2837	1798508
13	12.1	7.9	2.4	chr19	1325363	1325400	(57292216)	+	(GCG)n	Simple_repeat	1	41	(0)	1798581
671	1.4	0.0	0.0	chr19	1383362	1383434	(57234182)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1798705
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
48	0.0	0.0	0.0	chr19	1407620	1407662	(57209954)	+	(GCC)n	Simple_repeat	1	43	(0)	1798748
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
14	15.5	0.0	0.0	chr19	1482863	1482891	(57134725)	+	(GCCCC)n	Simple_repeat	1	29	(0)	1798847
12	36.9	0.0	0.0	chr19	1490253	1490314	(57127302)	+	G-rich	Low_complexity	1	62	(0)	1798867
13	19.4	0.0	2.7	chr19	1490332	1490368	(57127248)	+	G-rich	Low_complexity	1	37	(0)	1798867
208	29.7	1.3	1.9	chr19	1507703	1507790	(57109826)	+	MIRb	SINE/MIR	178	262	(0)	1798897
11	18.4	2.4	4.8	chr19	1508287	1508327	(57109289)	+	G-rich	Low_complexity	1	42	(0)	1798898
2425	6.9	0.3	0.3	chr19	1569236	1569538	(57048078)	+	AluSg	SINE/Alu	2	304	(6)	1799040
12	22.9	0.0	4.3	chr19	1747376	1747417	(56870199)	+	(CCGC)n	Simple_repeat	1	40	(0)	1799449
38	2.8	0.0	0.0	chr19	1747418	1747454	(56870162)	+	(CA)n	Simple_repeat	1	37	(0)	1799450
249	21.0	3.6	8.0	chr19	1747795	1747882	(56869734)	+	L2c	LINE/L2	3066	3149	(238)	1799452
11	16.4	2.1	8.2	chr19	1748311	1748358	(56869258)	+	(GCCAG)n	Simple_repeat	1	49	(0)	1799453
2201	10.0	0.7	0.0	chr19	1794975	1795265	(56822351)	+	AluSx1	SINE/Alu	1	293	(19)	1799529
12	28.9	0.0	2.1	chr19	1855416	1855463	(56762153)	+	G-rich	Low_complexity	1	48	(0)	1799632
13	20.3	0.0	4.7	chr19	1863914	1863956	(56753660)	+	(CCCCGC)n	Simple_repeat	1	43	(0)	1799636
14	8.3	0.0	3.6	chr19	1905230	1905257	(56712359)	+	(CGGGG)n	Simple_repeat	1	28	(0)	1799731
20	18.0	3.0	2.9	chr19	1914172	1914227	(56703389)	+	G-rich	Low_complexity	1	56	(0)	1799748
1680	15.0	3.5	1.1	chr19	1939742	1940021	(56677595)	C	AluJb	SINE/Alu	(25)	287	1	1799808
235	32.5	6.6	3.4	chr19	1940058	1940175	(56677441)	+	L2c	LINE/L2	3263	3384	(3)	1799809
13	14.0	4.7	4.4	chr19	1940696	1940738	(56676878)	+	(CGCCGC)n	Simple_repeat	1	45	(0)	1799810
2239	10.2	0.0	0.0	chr19	1992579	1992871	(56624745)	C	AluSx1	SINE/Alu	(19)	293	1	1799886
13	16.5	2.2	6.4	chr19	2032506	2032564	(56585052)	+	G-rich	Low_complexity	1	56	(0)	1800006
188	22.1	3.9	0.0	chr19	2048515	2048589	(56569027)	+	MIR1_Amn	SINE/MIR	42	129	(101)	1800031
32	12.3	1.9	0.0	chr19	2049894	2049946	(56567670)	+	(AC)n	Simple_repeat	1	54	(0)	1800033
13	12.1	0.0	3.5	chr19	2050096	2050124	(56567492)	+	(CCCTG)n	Simple_repeat	1	29	(0)	1800034
277	29.4	2.5	0.0	chr19	2054803	2054921	(56562695)	C	MER20	DNA/hAT-Charlie	(2)	217	96	1800046
12	19.4	0.0	5.1	chr19	2055017	2055055	(56562561)	+	(CCTGTGC)n	Simple_repeat	1	39	(0)	1800047
27	15.4	5.8	4.3	chr19	2114129	2114215	(56503401)	+	(TTCTCT)n	Simple_repeat	1	92	(0)	1800166
715	31.9	3.9	0.0	chr19	2140156	2140453	(56477163)	+	L1MB7	LINE/L1	5473	5782	(392)	1800194
160	34.2	0.9	1.3	chr19	2157480	2157734	(56459882)	+	(ATCC)n	Simple_repeat	2	256	(0)	1800248
226	21.6	14.0	0.0	chr19	2157735	2157808	(56459808)	C	L2b	LINE/L2	(0)	3375	3290	1800249
236	28.6	7.1	0.0	chr19	2162772	2162862	(56454754)	C	MIR1_Amn	SINE/MIR	(79)	151	54	1800267
14	15.7	5.5	5.2	chr19	2247689	2247743	(56369873)	+	(CCTGC)n	Simple_repeat	1	58	(0)	1800393
766	22.9	0.3	2.2	chr19	2260318	2260534	(56357082)	C	L1M3	LINE/L1	(571)	5609	5400	1800411
891	14.5	0.0	0.0	chr19	2260535	2260665	(56356951)	C	FLAM_C	SINE/Alu	(12)	131	1	1800412
13	17.7	3.1	0.0	chr19	2328712	2328743	(56288873)	+	(GGC)n	Simple_repeat	1	33	(0)	1800571
15	13.6	0.0	2.9	chr19	2434926	2434959	(56182657)	+	G-rich	Low_complexity	1	34	(0)	1800786
12	20.8	0.0	2.9	chr19	2434962	2434996	(56182620)	+	(CCCG)n	Simple_repeat	1	35	(0)	1800787
1733	16.3	2.9	2.6	chr19	2448891	2449196	(56168420)	C	AluJo	SINE/Alu	(5)	307	1	1800811
800	28.2	6.2	0.4	chr19	2449197	2449432	(56168184)	+	Tigger3a	DNA/TcMar-Tigger	95	347	(1)	1800810
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
372	23.4	14.5	3.4	chr19	2619035	2619211	(55998405)	+	Charlie1b	DNA/hAT-Charlie	320	519	(4)	1801258
1048	21.5	7.7	0.0	chr19	2619224	2619428	(55998188)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	1801259
1006	22.8	2.7	0.9	chr19	3022793	3023009	(55594607)	C	MER58A	DNA/hAT-Charlie	(3)	221	1	1802197
2118	9.6	5.7	0.0	chr19	3023055	3023335	(55594281)	C	AluSx4	SINE/Alu	(12)	298	1	1802198
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
2409	10.3	0.0	0.0	chr19	3037003	3037314	(55580302)	+	AluSx	SINE/Alu	1	312	(0)	1802229
402	25.4	21.2	0.5	chr19	3047759	3047946	(55569670)	+	L2a	LINE/L2	3172	3412	(14)	1802259
2163	10.7	1.0	0.7	chr19	3047947	3048244	(55569372)	+	AluSx1	SINE/Alu	1	299	(13)	1802260
12	18.4	0.0	3.0	chr19	3136199	3136231	(55481385)	+	(CCCTC)n	Simple_repeat	1	33	(0)	1802474
196	34.1	3.1	10.0	chr19	3193550	3193689	(55423927)	+	MER5A	DNA/hAT-Charlie	58	187	(2)	1802604
242	22.8	10.5	1.7	chr19	3399001	3399124	(55218492)	+	MIR1_Amn	SINE/MIR	12	157	(73)	1803161
631	23.3	4.9	0.0	chr19	3440178	3440353	(55177263)	C	MER20	DNA/hAT-Charlie	(18)	201	17	1803295
17	16.5	1.9	5.6	chr19	3459649	3459701	(55157915)	+	G-rich	Low_complexity	1	54	(0)	1803344
13	12.5	0.0	0.0	chr19	3578120	3578145	(55039471)	+	(GCGGG)n	Simple_repeat	1	26	(0)	1803570
757	27.6	10.8	3.4	chr19	3670220	3670631	(54946985)	+	MLT1C	LTR/ERVL-MaLR	7	452	(15)	1803741
514	28.7	0.0	2.9	chr19	3710695	3710834	(54906782)	C	L2a	LINE/L2	(12)	3414	3279	1803836
13	32.3	0.0	1.7	chr19	3721714	3721772	(54895844)	+	GA-rich	Low_complexity	1	59	(0)	1803877
1482	20.5	2.2	1.0	chr19	3851676	3851986	(54765630)	+	MER58B	DNA/hAT-Charlie	27	341	(0)	1804160
345	22.9	8.7	8.7	chr19	3851987	3852180	(54765436)	C	MLT1H	LTR/ERVL-MaLR	(48)	501	308	1804161
43	15.4	2.7	4.4	chr19	3933304	3933414	(54684202)	+	GA-rich	Low_complexity	1	114	(0)	1804375
1866	13.2	2.5	0.0	chr19	3949702	3949973	(54667643)	C	AluJo	SINE/Alu	(23)	289	11	1804417
13	8.2	3.9	0.0	chr19	3950069	3950094	(54667522)	+	(CCTGC)n	Simple_repeat	1	27	(0)	1804418
28	20.5	5.4	2.0	chr19	3971044	3971136	(54646480)	+	(GCC)n	Simple_repeat	1	98	(0)	1804459
227	29.6	0.3	6.5	chr19	4051783	4051890	(54565726)	C	MIR1_Amn	SINE/MIR	(72)	136	34	1804629
235	24.1	1.1	12.1	chr19	4059524	4059622	(54557994)	C	MIR3	SINE/MIR	(79)	151	64	1804642
15	14.5	5.3	0.0	chr19	4064491	4064528	(54553088)	+	(GGCCT)n	Simple_repeat	1	40	(0)	1804651
16	14.9	9.5	2.9	chr19	4067107	4067169	(54550447)	+	(CCGCG)n	Simple_repeat	1	69	(0)	1804657
14	12.1	8.2	6.1	chr19	4067704	4067764	(54549852)	+	(GGCCGCG)n	Simple_repeat	1	66	(0)	1804658
13	20.8	6.1	4.3	chr19	4096164	4096229	(54521387)	+	G-rich	Low_complexity	1	70	(0)	1804737
751	23.7	12.2	0.8	chr19	4181041	4181494	(54436122)	+	L2a	LINE/L2	2822	3370	(5)	1804962
137	0.0	0.0	0.0	chr19	4247583	4247698	(54369918)	+	(GT)n	Simple_repeat	1	116	(0)	1805151
231	15.8	0.0	0.0	chr19	4247706	4247743	(54369873)	C	MER68B	LTR/ERVL	(300)	264	227	1805152
626	21.2	0.8	0.0	chr19	4247746	4247863	(54369753)	C	MER68B	LTR/ERVL	(288)	276	158	1805152
198	32.7	14.1	0.0	chr19	4288549	4288658	(54328958)	+	L3	LINE/CR1	3952	4079	(20)	1805274
18	23.8	1.8	1.8	chr19	4402651	4402706	(54214910)	+	(GCG)n	Simple_repeat	1	57	(0)	1805516
415	27.7	2.8	1.4	chr19	4482659	4482797	(54134819)	+	MIR	SINE/MIR	13	153	(109)	1805700
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
498	13.4	0.0	0.0	chr19	4773468	4773534	(53844082)	+	AluSz	SINE/Alu	1	67	(245)	1806419
1067	10.9	8.7	0.0	chr19	4773539	4773685	(53843931)	C	AluSz	SINE/Alu	(146)	166	6	1806420
1028	27.9	12.4	0.9	chr19	4870078	4870316	(53747300)	C	L2a	LINE/L2	(240)	3186	2935	1806723
194	18.4	9.3	0.0	chr19	4870318	4870366	(53747250)	C	MIR1_Amn	SINE/MIR	(105)	125	72	1806725
594	21.9	0.0	0.0	chr19	4915315	4915428	(53702188)	C	MER58A	DNA/hAT-Charlie	(65)	159	46	1806862
2205	10.8	1.6	0.3	chr19	4915432	4915736	(53701880)	+	AluSx	SINE/Alu	1	309	(3)	1806863
397	32.2	4.5	9.4	chr19	4968110	4968342	(53649274)	C	MIRb	SINE/MIR	(21)	247	27	1806998
2354	8.3	1.6	0.0	chr19	5020865	5021166	(53596450)	+	AluSx	SINE/Alu	1	307	(5)	1807092
1732	14.2	7.6	2.4	chr19	5021307	5021594	(53596022)	+	AluJr	SINE/Alu	1	304	(8)	1807093
547	8.1	3.9	0.0	chr19	5026131	5026204	(53591412)	+	AluJo	SINE/Alu	5	81	(231)	1807102
443	2.0	0.0	0.0	chr19	5026276	5026324	(53591292)	C	AluYk11	SINE/Alu	(262)	49	1	1807103
812	20.8	2.0	0.7	chr19	5026333	5026481	(53591135)	C	FRAM	SINE/Alu	(25)	151	1	1807104
194	34.0	13.6	0.0	chr19	5355326	5355478	(53262138)	C	MIR	SINE/MIR	(6)	256	80	1807745
11	24.1	2.6	0.0	chr19	5430390	5430428	(53187188)	+	G-rich	Low_complexity	1	40	(0)	1807964
13	9.1	11.1	0.0	chr19	5430469	5430504	(53187112)	+	A-rich	Low_complexity	1	40	(0)	1807965
2264	11.4	0.0	0.0	chr19	5470074	5470380	(53147236)	C	AluSx1	SINE/Alu	(5)	307	1	1808081
1333	27.7	3.6	5.8	chr19	5470410	5470923	(53146693)	+	L1ME2	LINE/L1	5585	6086	(78)	1808082
24	21.2	3.4	7.3	chr19	5567927	5568045	(53049571)	+	(CGCC)n	Simple_repeat	1	123	(0)	1808369
23	17.2	8.0	5.9	chr19	5568046	5568051	(53049565)	+	(CGGCCGCC)n	Simple_repeat	114	152	(0)	1808368
961	22.2	0.0	0.0	chr19	5632735	5632901	(52984715)	C	AluJr	SINE/Alu	(9)	303	137	1808494
2673	24.5	14.6	1.8	chr19	5632902	5633496	(52984120)	C	L1MC4	LINE/L1	(598)	7444	6774	1808493
1947	11.8	2.9	0.3	chr19	5767785	5768088	(52849528)	C	AluSx	SINE/Alu	(0)	312	1	1808800
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
1962	12.2	1.7	4.0	chr19	5875043	5875346	(52742270)	C	AluSx1	SINE/Alu	(15)	297	1	1809037
25	9.2	0.0	0.0	chr19	6109004	6109038	(52508578)	+	(GT)n	Simple_repeat	1	35	(0)	1809423
12	16.6	0.0	0.0	chr19	6161441	6161467	(52456149)	+	A-rich	Low_complexity	1	27	(0)	1809585
13	12.7	0.0	9.5	chr19	6459847	6459888	(52157728)	+	G-rich	Low_complexity	1	42	(0)	1810295
446	32.6	7.3	0.6	chr19	6499316	6499494	(52118122)	+	MIRb	SINE/MIR	30	221	(47)	1810400
188	35.8	0.0	7.8	chr19	6499599	6499701	(52117915)	+	L2b	LINE/L2	3027	3121	(254)	1810401
947	15.8	1.8	17.0	chr19	6504835	6505075	(52112541)	+	MER20	DNA/hAT-Charlie	15	219	(0)	1810418
1659	17.7	1.7	3.9	chr19	6528464	6528768	(52088848)	+	AluJo	SINE/Alu	1	298	(14)	1810493
16	17.6	3.3	6.5	chr19	6678053	6678112	(51939504)	+	(GGCGT)n	Simple_repeat	1	62	(0)	1810893
14	14.7	0.0	7.0	chr19	7294289	7294331	(51323285)	+	(GGCGGCG)n	Simple_repeat	1	43	(0)	1812538
22	30.0	2.2	1.1	chr19	7294332	7294350	(51323266)	+	G-rich	Low_complexity	55	93	(0)	1812537
14	15.8	2.7	2.6	chr19	7294486	7294522	(51323094)	+	(CCGC)n	Simple_repeat	1	38	(0)	1812539
843	15.5	0.8	0.0	chr19	7585171	7585299	(51032317)	C	AluSx3	SINE/Alu	(19)	292	163	1813288
2309	9.5	0.0	0.0	chr19	7585349	7585643	(51031973)	+	AluSx	SINE/Alu	1	295	(17)	1813289
18	24.2	0.0	0.0	chr19	7595613	7595661	(51021955)	+	(CA)n	Simple_repeat	1	49	(0)	1813324
20	30.4	3.4	0.0	chr19	7595749	7595836	(51021780)	+	G-rich	Low_complexity	1	91	(0)	1813325
13	26.2	1.7	4.9	chr19	7874351	7874410	(50743206)	+	(GCG)n	Simple_repeat	1	61	(0)	1813881
16	23.7	0.0	3.8	chr19	7888424	7888476	(50729140)	+	G-rich	Low_complexity	1	53	(0)	1813921
14	16.7	4.8	2.3	chr19	7918124	7918165	(50699451)	+	(AGGT)n	Simple_repeat	1	44	(0)	1813973
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
229	29.3	1.7	10.8	chr19	7969032	7969161	(50648455)	C	SVA_F	Retroposon/SVA	(1136)	239	122	1814064
703	22.5	0.0	0.0	chr19	7969098	7969217	(50648399)	+	FLAM_A	SINE/Alu	13	132	(10)	1814065
2045	14.2	0.0	1.0	chr19	8223334	8223636	(50393980)	+	AluSq2	SINE/Alu	1	300	(13)	1814745
1333	15.2	0.0	6.1	chr19	8223637	8223805	(50393811)	+	AluJb	SINE/Alu	134	302	(10)	1814744
35	0.0	0.0	0.0	chr19	8240586	8240615	(50377001)	+	(GT)n	Simple_repeat	1	30	(0)	1814796
659	28.0	9.5	2.9	chr19	8308608	8308853	(50308763)	+	L2a	LINE/L2	3163	3426	(0)	1814980
15	17.1	2.4	2.4	chr19	8343231	8343271	(50274345)	+	(CCGCGC)n	Simple_repeat	1	42	(0)	1815070
12	22.0	4.8	4.5	chr19	8444846	8444908	(50172708)	+	G-rich	Low_complexity	1	66	(0)	1815352
2255	9.3	0.7	0.0	chr19	8484170	8484471	(50133145)	C	AluSg	SINE/Alu	(5)	305	2	1815406
251	16.7	0.0	0.0	chr19	9786321	9786362	(48831254)	+	MLT1H	LTR/ERVL-MaLR	508	549	(0)	1818105
13	15.8	2.7	2.6	chr19	9819587	9819623	(48797993)	+	(GGCGG)n	Simple_repeat	1	38	(0)	1818191
1536	22.3	1.0	0.0	chr19	9877863	9878149	(48739467)	C	AluJb	SINE/Alu	(22)	290	1	1818334
885	22.6	12.9	8.6	chr19	9878150	9878208	(48739408)	+	MSTD	LTR/ERVL-MaLR	338	396	(0)	1818329
923	12.8	0.0	12.7	chr19	9881797	9881949	(48735667)	C	MLT1B	LTR/ERVL-MaLR	(210)	180	36	1818347
2057	12.1	0.0	2.6	chr19	9881950	9882256	(48735360)	+	AluJb	SINE/Alu	1	299	(13)	1818349
26	9.3	0.0	2.1	chr19	10010012	10010059	(48607557)	+	(ATGCACACAC)n	Simple_repeat	1	48	(0)	1818679
14	17.5	0.0	0.0	chr19	10010198	10010229	(48607387)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1818680
324	32.1	6.1	6.1	chr19	10401152	10401347	(48216269)	C	MIRb	SINE/MIR	(71)	197	2	1819648
463	23.0	1.0	1.0	chr19	10451712	10451812	(48165804)	C	MER91C	DNA/hAT-Tip100	(0)	140	40	1819782
291	27.3	0.5	8.8	chr19	10462895	10462912	(48154704)	C	SVA_B	Retroposon/SVA	(1180)	206	195	1819809
667	20.2	0.0	0.0	chr19	10462913	10463021	(48154595)	+	FLAM_A	SINE/Alu	1	109	(33)	1819810
17	13.9	0.0	6.7	chr19	10543828	10543872	(48073744)	+	G-rich	Low_complexity	1	45	(0)	1820056
353	19.3	1.2	5.7	chr19	10544505	10544592	(48073024)	+	MIR	SINE/MIR	81	164	(98)	1820057
14	15.9	0.0	0.0	chr19	10568987	10569014	(48048602)	+	(CGC)n	Simple_repeat	1	28	(0)	1820117
2294	9.2	0.7	0.3	chr19	10645051	10645353	(47972263)	C	AluSx1	SINE/Alu	(8)	304	1	1820341
677	26.8	5.3	0.5	chr19	10690379	10690577	(47927039)	+	MER20	DNA/hAT-Charlie	3	211	(8)	1820428
17	23.0	4.0	3.8	chr19	10762855	10762930	(47854686)	+	(TGGAGG)n	Simple_repeat	1	79	(0)	1820631
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
521	25.0	6.3	2.6	chr19	10837002	10837211	(47780405)	+	MIRb	SINE/MIR	28	268	(0)	1820786
2190	9.7	2.4	0.0	chr19	10975319	10975608	(47642008)	C	AluSc	SINE/Alu	(12)	297	1	1821160
368	17.2	15.2	3.0	chr19	11137656	11137787	(47479829)	+	MIRb	SINE/MIR	25	175	(93)	1821542
209	26.8	3.5	3.5	chr19	11139429	11139486	(47478130)	+	MIR	SINE/MIR	16	73	(189)	1821545
710	26.2	4.5	0.0	chr19	11143436	11143626	(47473990)	+	MER20	DNA/hAT-Charlie	20	219	(0)	1821559
265	33.0	9.5	1.9	chr19	11265986	11266198	(47351418)	C	L2	LINE/L2	(623)	2796	2566	1821872
2377	11.2	0.0	0.6	chr19	11333682	11333995	(47283621)	C	AluSx1	SINE/Alu	(0)	312	1	1822076
789	12.8	11.3	0.0	chr19	11333998	11334146	(47283470)	+	MER58A	DNA/hAT-Charlie	57	224	(0)	1822077
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
1770	18.0	0.0	2.5	chr19	12480768	12481083	(46136533)	C	AluJb	SINE/Alu	(4)	308	1	1824511
12	4.3	8.3	0.0	chr19	12721222	12721245	(45896371)	+	(GGC)n	Simple_repeat	1	26	(0)	1825077
13	19.6	2.2	4.3	chr19	12751747	12751791	(45865825)	+	(CACGCC)n	Simple_repeat	1	46	(0)	1825144
444	31.6	1.3	3.8	chr19	12777855	12778012	(45839604)	C	MIRb	SINE/MIR	(0)	268	115	1825195
235	8.3	3.6	2.7	chr19	12937925	12937986	(45679630)	C	MIRb	SINE/MIR	(145)	123	60	1825580
1003	23.8	10.4	4.3	chr19	12965023	12965417	(45652199)	C	L2	LINE/L2	(537)	2882	2461	1825650
2077	11.6	0.0	0.4	chr19	12974119	12974393	(45643223)	C	AluSx1	SINE/Alu	(12)	300	26	1825680
16	20.9	0.0	0.0	chr19	12974523	12974555	(45643061)	+	A-rich	Low_complexity	1	33	(0)	1825681
1929	11.9	2.7	1.4	chr19	12976059	12976351	(45641265)	C	AluJo	SINE/Alu	(15)	297	1	1825683
33	0.0	0.0	0.0	chr19	12976359	12976386	(45641230)	+	(GT)n	Simple_repeat	1	28	(0)	1825684
18	4.5	0.0	0.0	chr19	13026722	13026744	(45590872)	+	(CT)n	Simple_repeat	1	23	(0)	1825778
29	0.0	0.0	0.0	chr19	13026745	13026769	(45590847)	+	(TG)n	Simple_repeat	1	25	(0)	1825779
491	29.5	9.8	1.2	chr19	13117903	13118070	(45499546)	C	MIRc	SINE/MIR	(30)	238	55	1825908
26	21.7	1.0	6.2	chr19	13118791	13118886	(45498730)	+	G-rich	Low_complexity	1	97	(0)	1825910
1748	9.7	13.5	0.0	chr19	13141627	13141883	(45475733)	C	AluSp	SINE/Alu	(8)	305	9	1825965
1079	16.9	1.1	0.6	chr19	13141897	13142073	(45475543)	+	AluJb	SINE/Alu	120	297	(15)	1825966
463	18.9	0.1	4.8	chr19	13782447	13782573	(44835043)	C	MER50	LTR/ERV1	(116)	666	501	1827778
1669	17.5	5.4	0.0	chr19	13782585	13782864	(44834752)	C	AluJr	SINE/Alu	(15)	297	2	1827779
11	24.1	0.0	0.0	chr19	13826303	13826336	(44791280)	+	(GGCTGA)n	Simple_repeat	1	34	(0)	1827910
2266	10.9	0.3	0.0	chr19	13826488	13826781	(44790835)	+	AluSg	SINE/Alu	3	297	(13)	1827911
14	14.3	0.0	3.0	chr19	13850546	13850578	(44767038)	+	G-rich	Low_complexity	1	33	(0)	1827953
12	16.0	5.7	0.0	chr19	13851404	13851438	(44766178)	+	(TCCCTAC)n	Simple_repeat	1	37	(0)	1827956
14	4.5	4.3	0.0	chr19	13885165	13885187	(44732429)	+	(AGG)n	Simple_repeat	1	24	(0)	1828040
187	21.1	3.7	3.7	chr19	13953468	13953521	(44664095)	+	L2b	LINE/L2	3264	3317	(70)	1828205
2326	8.4	0.0	0.0	chr19	14057826	14058121	(44559495)	+	AluSx1	SINE/Alu	1	296	(16)	1828468
13	24.8	0.0	3.9	chr19	14136937	14136987	(44480629)	+	(GCAGCGC)n	Simple_repeat	1	51	(0)	1828672
2368	9.7	0.0	0.0	chr19	14300106	14300405	(44317211)	+	AluSq2	SINE/Alu	1	300	(13)	1829107
1946	20.1	10.7	4.4	chr19	14300406	14300418	(44317198)	+	MER66B	LTR/ERV1	60	73	(413)	1829106
40	0.0	2.4	2.3	chr19	14300419	14300460	(44317156)	+	(GT)n	Simple_repeat	1	43	(0)	1829108
1946	20.1	10.7	4.4	chr19	14300461	14300800	(44316816)	+	MER66B	LTR/ERV1	74	458	(28)	1829106
2857	7.5	1.9	14.0	chr19	14343706	14344066	(44273550)	+	LTR7B	LTR/ERV1	1	293	(171)	1829250
2448	7.1	0.0	0.0	chr19	14344067	14344360	(44273256)	+	AluY	SINE/Alu	1	294	(17)	1829251
378	24.8	2.7	2.7	chr19	14353522	14353633	(44263983)	C	MIRb	SINE/MIR	(101)	167	56	1829276
47	0.0	0.0	0.0	chr19	14381266	14381305	(44236311)	+	(GT)n	Simple_repeat	1	40	(0)	1829360
15	21.0	3.9	1.9	chr19	14408183	14408233	(44209383)	+	(CCCT)n	Simple_repeat	1	53	(0)	1829426
2009	14.0	1.3	1.3	chr19	14416679	14416986	(44200630)	C	AluJb	SINE/Alu	(4)	308	1	1829436
1676	13.0	8.6	3.6	chr19	14448166	14448442	(44169174)	C	AluJr	SINE/Alu	(20)	292	1	1829527
574	32.2	4.8	0.4	chr19	14491588	14491827	(44125789)	+	L2	LINE/L2	2638	2888	(531)	1829634
1647	13.4	10.0	0.0	chr19	14491828	14492089	(44125527)	+	AluYc	SINE/Alu	1	291	(8)	1829635
30	0.0	0.0	0.0	chr19	14505959	14505984	(44111632)	+	(TG)n	Simple_repeat	1	26	(0)	1829675
2341	9.3	0.0	1.0	chr19	14551073	14551374	(44066242)	C	AluSx1	SINE/Alu	(13)	299	1	1829786
302	18.0	0.0	0.0	chr19	14551375	14551424	(44066192)	C	AluJr	SINE/Alu	(177)	135	86	1829787
32	30.7	1.9	9.1	chr19	14564295	14564670	(44052946)	+	(CCCGC)n	Simple_repeat	1	383	(0)	1829809
16	30.9	1.4	1.4	chr19	15380240	15380308	(43237308)	+	(GGC)n	Simple_repeat	1	70	(0)	1831698
17	14.2	0.0	0.0	chr19	15380373	15380403	(43237213)	+	(CCT)n	Simple_repeat	1	31	(0)	1831699
13	18.3	5.4	0.0	chr19	15432769	15432805	(43184811)	+	(GCC)n	Simple_repeat	1	39	(0)	1831784
61	0.0	0.0	0.0	chr19	15470242	15470296	(43147320)	+	(TTCC)n	Simple_repeat	1	55	(0)	1831860
13	28.1	0.0	0.0	chr19	15640826	15640868	(42976748)	+	(CTAGC)n	Simple_repeat	1	43	(0)	1832275
18	3.8	0.0	3.5	chr19	15673013	15673041	(42944575)	+	(GCCCA)n	Simple_repeat	1	29	(0)	1832337
12	24.3	0.0	4.3	chr19	16197976	16198022	(42419594)	+	(CGCTGC)n	Simple_repeat	1	47	(0)	1833391
1789	17.2	0.0	2.0	chr19	16562711	16563013	(42054603)	C	AluJb	SINE/Alu	(15)	297	1	1834206
1964	13.3	1.1	1.1	chr19	16563039	16563323	(42054293)	+	AluSq2	SINE/Alu	1	285	(28)	1834207
504	30.0	9.9	7.2	chr19	16609627	16609995	(42007621)	+	Charlie17b	DNA/hAT-Charlie	591	955	(249)	1834269
1760	14.4	5.6	3.3	chr19	16609996	16610294	(42007322)	+	AluJo	SINE/Alu	2	307	(5)	1834270
2323	10.5	0.0	0.3	chr19	17025129	17025432	(41592184)	+	AluSp	SINE/Alu	1	303	(10)	1835329
2317	10.8	0.0	0.7	chr19	17081527	17081832	(41535784)	+	AluSx	SINE/Alu	1	304	(8)	1835444
48	31.8	3.3	3.5	chr19	17202317	17202618	(41414998)	+	(CATGC)n	Simple_repeat	1	312	(0)	1835741
2270	11.7	0.0	1.6	chr19	17219963	17220279	(41397337)	+	AluSz	SINE/Alu	1	312	(0)	1835771
2372	7.8	0.0	2.6	chr19	17317230	17317535	(41300081)	+	AluY	SINE/Alu	3	300	(11)	1836018
1600	19.4	3.0	2.7	chr19	17317558	17317856	(41299760)	+	AluJr	SINE/Alu	1	300	(12)	1836019
24	31.4	4.0	3.2	chr19	17340640	17340791	(41276825)	+	(CTCTG)n	Simple_repeat	1	158	(0)	1836064
14	19.1	6.2	4.3	chr19	17539743	17539807	(41077809)	+	(GCGTGAG)n	Simple_repeat	1	69	(0)	1836643
15	36.9	0.0	2.3	chr19	17555736	17555748	(41061868)	+	(GCC)n	Simple_repeat	1	26	(60)	1836688
15	28.4	0.0	0.0	chr19	17555749	17555795	(41061821)	+	(GCT)n	Simple_repeat	1	47	(0)	1836689
576	30.8	5.2	7.6	chr19	17576084	17576557	(41041059)	C	L2b	LINE/L2	(1)	3374	2913	1836754
11	17.3	2.1	8.2	chr19	17655150	17655197	(40962419)	+	G-rich	Low_complexity	1	49	(0)	1836925
214	29.8	7.5	5.3	chr19	17865921	17866051	(40751565)	+	MIRb	SINE/MIR	104	237	(31)	1837470
296	31.3	2.2	2.2	chr19	17950214	17950347	(40667269)	C	L2b	LINE/L2	(221)	3154	3021	1837700
15	19.5	0.0	7.4	chr19	18109891	18109944	(40507672)	+	G-rich	Low_complexity	1	54	(0)	1838132
24	27.1	2.0	3.0	chr19	18149348	18149445	(40468171)	+	(CCCG)n	Simple_repeat	1	100	(0)	1838219
17	29.3	1.7	0.0	chr19	18173834	18173892	(40443724)	+	(CTG)n	Simple_repeat	1	60	(0)	1838274
12	15.9	5.7	0.0	chr19	18204228	18204262	(40413354)	+	(CCGCCT)n	Simple_repeat	1	37	(0)	1838360
181	32.4	4.3	1.8	chr19	18224033	18224145	(40393471)	+	L2c	LINE/L2	3005	3120	(267)	1838407
2503	7.6	0.0	1.0	chr19	18241225	18241566	(40376050)	C	AluY	SINE/Alu	(0)	311	1	1838445
2285	10.7	0.0	0.0	chr19	18305625	18305922	(40311694)	+	AluSz	SINE/Alu	1	298	(14)	1838585
16	24.4	1.6	4.7	chr19	18323042	18323104	(40294512)	+	(CGC)n	Simple_repeat	1	64	(0)	1838616
291	25.2	7.5	1.0	chr19	18340195	18340294	(40277322)	+	MIR	SINE/MIR	38	144	(118)	1838666
196	15.6	0.0	0.0	chr19	18340441	18340472	(40277144)	C	MIR1_Amn	SINE/MIR	(76)	154	123	1838667
881	18.0	0.6	1.9	chr19	18416317	18416477	(40201139)	C	AluJb	SINE/Alu	(17)	295	137	1838865
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
364	27.8	6.5	0.9	chr19	18417204	18417319	(40200297)	+	L2c	LINE/L2	3260	3382	(5)	1838866
2361	10.1	0.0	1.0	chr19	18421876	18422181	(40195435)	+	AluSx1	SINE/Alu	1	303	(9)	1838875
17	20.0	0.0	0.0	chr19	18429057	18429096	(40188520)	+	(GGCGCAG)n	Simple_repeat	1	40	(0)	1838879
272	17.0	5.9	0.9	chr19	18441979	18442637	(40174979)	+	(AC)n	Simple_repeat	1	698	(0)	1838889
17	12.5	0.0	0.0	chr19	18445538	18445591	(40172025)	+	(G)n	Simple_repeat	1	54	(0)	1838893
30	20.2	1.8	7.0	chr19	18606838	18606949	(40010667)	+	(CCCG)n	Simple_repeat	1	114	(0)	1839214
30	23.4	3.3	4.8	chr19	18606950	18606956	(40010660)	+	(GGCCC)n	Simple_repeat	4	126	(0)	1839215
250	26.3	19.1	0.0	chr19	18622789	18622902	(39994714)	+	LTR33	LTR/ERVL	36	176	(339)	1839248
2304	11.3	0.3	0.3	chr19	18622999	18623308	(39994308)	+	AluSq2	SINE/Alu	1	310	(3)	1839249
15	0.0	0.0	0.0	chr19	18635129	18635145	(39982471)	+	(GT)n	Simple_repeat	1	17	(0)	1839288
13	10.0	5.9	2.8	chr19	18670138	18670171	(39947445)	+	(CCCTG)n	Simple_repeat	1	36	(0)	1839332
310	33.5	9.5	1.0	chr19	18699737	18699938	(39917678)	C	L2	LINE/L2	(511)	2908	2688	1839405
12	4.3	8.3	0.0	chr19	18883806	18883829	(39733787)	+	(GGGTG)n	Simple_repeat	1	26	(0)	1839761
193	29.1	4.5	4.5	chr19	19034325	19034457	(39583159)	C	L2b	LINE/L2	(460)	2959	2827	1840113
1197	12.3	0.0	0.0	chr19	19034598	19034768	(39582848)	C	AluSx	SINE/Alu	(21)	291	121	1840114
16	32.2	1.7	0.0	chr19	19214398	19214458	(39403158)	+	(GT)n	Simple_repeat	1	62	(0)	1840513
13	17.5	0.0	2.9	chr19	19405656	19405689	(39211927)	+	(GCCCC)n	Simple_repeat	1	34	(0)	1840930
12	9.9	5.6	5.3	chr19	28727729	28727764	(29889852)	+	(GCCCC)n	Simple_repeat	1	38	(0)	1849165
292	26.7	11.1	0.8	chr19	28727891	28728011	(29889605)	+	MIR3	SINE/MIR	3	137	(71)	1849166
308	26.1	5.2	2.1	chr19	28862170	28862263	(29755353)	C	MIRb	SINE/MIR	(88)	180	84	1849341
1658	18.8	6.2	2.3	chr19	28862299	28862652	(29754964)	+	LTR8B	LTR/ERV1	436	804	(16)	1849342
1289	15.8	4.8	6.8	chr19	28989837	28990115	(29627501)	+	MER21A	LTR/ERVL	659	931	(0)	1849558
13	3.7	10.7	0.0	chr19	29623776	29623803	(28993813)	+	(TGAG)n	Simple_repeat	1	31	(0)	1850505
1521	20.9	2.7	9.7	chr19	29626772	29626996	(28990620)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	157	1850510
2198	13.8	0.3	0.0	chr19	29626997	29627308	(28990308)	+	AluSq2	SINE/Alu	1	313	(0)	1850511
288	25.4	11.3	0.0	chr19	29757739	29757864	(28859752)	+	MER115	DNA/hAT-Tip100	72	213	(480)	1850770
844	20.0	13.2	2.1	chr19	29757883	29758076	(28859540)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1850771
530	35.4	11.9	3.3	chr19	29799896	29800530	(28817086)	C	L2	LINE/L2	(607)	2812	2095	1850870
1867	15.8	0.0	5.7	chr19	29800531	29800677	(28816939)	+	AluJr	SINE/Alu	1	132	(180)	1850872
2221	12.3	0.7	0.0	chr19	29875385	29875693	(28741923)	+	AluSx1	SINE/Alu	1	311	(1)	1851047
15	5.5	13.2	0.0	chr19	30061047	30061089	(28556527)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1851342
194	24.0	1.3	8.5	chr19	30092947	30093028	(28524588)	+	MIR3	SINE/MIR	81	156	(52)	1851380
757	29.1	6.9	3.2	chr19	30356996	30357485	(28260131)	C	L2a	LINE/L2	(58)	3368	2864	1851742
1454	19.2	8.2	3.7	chr19	30756080	30756535	(27861081)	+	MER4CL34	LTR/ERV1	1	765	(0)	1852279
306	20.7	6.9	11.7	chr19	30881207	30881343	(27736273)	C	UCON12	Unknown	(63)	457	328	1852409
22	0.0	0.0	0.0	chr19	31071637	31071660	(27545956)	+	(GT)n	Simple_repeat	1	24	(0)	1852694
15	17.9	0.0	4.8	chr19	31349277	31349318	(27268298)	+	G-rich	Low_complexity	1	42	(0)	1853080
39	18.5	1.0	4.0	chr19	31349425	31349523	(27268093)	+	GA-rich	Low_complexity	1	100	(0)	1853081
16	26.5	3.1	1.5	chr19	31349883	31349894	(27267722)	+	(CCCGCC)n	Simple_repeat	1	24	(43)	1853082
14	16.1	2.9	0.0	chr19	31349895	31349929	(27267687)	+	(GGCCCCC)n	Simple_repeat	1	36	(0)	1853083
16	26.5	3.1	1.5	chr19	31349930	31349947	(27267669)	+	(CCCGCC)n	Simple_repeat	25	67	(0)	1853082
1424	17.9	5.2	11.5	chr19	32542776	32542954	(26074662)	+	MLT1A0	LTR/ERVL-MaLR	1	153	(212)	1854991
2117	10.4	0.4	0.4	chr19	32542955	32543233	(26074383)	+	AluSz	SINE/Alu	21	299	(13)	1854992
132	29.9	3.0	4.3	chr19	32720117	32720840	(25896776)	+	(CCCACC)n	Simple_repeat	1	746	(0)	1855371
22757	7.9	1.9	0.9	chr19	32781968	32788071	(25829545)	C	L1PA7	LINE/L1	(0)	6154	5	1855491
7222	10.9	9.6	4.6	chr19	32968799	32970009	(25647607)	C	MER52C	LTR/ERV1	(0)	1278	1	1855834
33	8.0	1.9	0.0	chr19	33063796	33063848	(25553768)	+	(CCGCCGC)n	Simple_repeat	1	54	(0)	1856076
1891	10.4	3.7	0.0	chr19	33064062	33064321	(25553295)	+	AluJo	SINE/Alu	1	270	(42)	1856077
1384	17.2	13.2	8.8	chr19	33078040	33078314	(25539302)	C	LTR24	LTR/ERV1	(112)	355	28	1856115
763	15.8	0.8	0.0	chr19	33078315	33078434	(25539182)	+	AluJr	SINE/Alu	136	256	(56)	1856117
17	7.6	11.5	4.4	chr19	33174808	33174868	(25442748)	+	(CATGAG)n	Simple_repeat	1	68	(0)	1856352
2324	11.2	0.0	0.0	chr19	33174953	33175263	(25442353)	+	AluSz	SINE/Alu	1	311	(1)	1856353
35	8.8	0.0	0.0	chr19	33274201	33274248	(25343368)	+	(TG)n	Simple_repeat	1	48	(0)	1856521
49	37.9	0.0	0.9	chr19	33274297	33274517	(25343099)	+	(GT)n	Simple_repeat	1	221	(0)	1856522
357	37.8	1.3	0.6	chr19	33292717	33292873	(25324743)	C	MIRb	SINE/MIR	(49)	219	62	1856545
411	23.5	0.0	8.5	chr19	33373111	33373240	(25244376)	+	SVA_E	Retroposon/SVA	194	312	(1070)	1856705
767	12.5	0.0	0.9	chr19	33373142	33373253	(25244363)	C	AluJo	SINE/Alu	(196)	116	6	1856706
762	22.5	5.8	1.1	chr19	33376442	33376621	(25240995)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1856710
1853	16.3	6.3	2.4	chr19	33730643	33731177	(24886439)	C	MLT2A2	LTR/ERVL	(0)	554	1	1857234
1902	17.9	0.3	0.3	chr19	33816142	33816449	(24801167)	+	AluJb	SINE/Alu	1	308	(4)	1857354
18	21.8	0.0	0.0	chr19	33906212	33906248	(24711368)	+	(C)n	Simple_repeat	1	37	(0)	1857522
2465	8.9	0.0	0.6	chr19	33915074	33915387	(24702229)	C	AluSx1	SINE/Alu	(0)	312	1	1857542
1656	29.5	10.3	1.7	chr19	34065998	34066378	(24551238)	+	L2	LINE/L2	2031	2424	(995)	1857809
2242	14.7	4.5	7.1	chr19	34066379	34066816	(24550800)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1857810
2504	7.1	0.0	0.0	chr19	34130261	34130556	(24487060)	+	AluSc	SINE/Alu	1	296	(13)	1857963
2055	12.4	7.1	4.1	chr19	34130557	34130714	(24486902)	C	THE1D	LTR/ERVL-MaLR	(227)	154	1	1857962
251	30.7	7.4	9.6	chr19	34130715	34130819	(24486797)	C	MamRTE1	LINE/RTE-BovB	(1820)	1992	1895	1857959
12	23.8	2.2	2.1	chr19	34134452	34134497	(24483119)	+	G-rich	Low_complexity	1	47	(0)	1857971
276	34.5	13.2	0.0	chr19	34317628	34317804	(24299812)	+	MIR	SINE/MIR	2	205	(57)	1858402
2361	7.8	0.0	1.4	chr19	34401224	34401519	(24216097)	C	AluY	SINE/Alu	(18)	293	2	1858549
1722	12.7	6.1	7.3	chr19	34401520	34401638	(24215978)	C	AluJo	SINE/Alu	(202)	110	1	1858548
877	21.7	2.4	0.0	chr19	34401648	34401808	(24215808)	C	AluJr	SINE/Alu	(17)	295	131	1858550
13	20.4	0.0	4.7	chr19	34428369	34428411	(24189205)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	1858626
24	26.6	1.0	4.8	chr19	34576491	34576593	(24041023)	+	(AGGTGG)n	Simple_repeat	1	104	(0)	1858859
1761	10.8	1.5	0.8	chr19	34667499	34667760	(23949856)	+	MER51A	LTR/ERV1	370	633	(1)	1858971
5168	10.3	5.8	2.5	chr19	34925006	34925808	(23691808)	C	LTR1A2	LTR/ERV1	(0)	837	7	1859339
14	11.7	0.0	3.3	chr19	35000393	35000417	(23617199)	+	(GCCCA)n	Simple_repeat	1	25	(0)	1859481
29	3.2	0.0	0.0	chr19	35000418	35000449	(23617167)	+	(GCCCT)n	Simple_repeat	1	32	(0)	1859482
223	25.9	5.6	1.0	chr19	35052746	35052831	(23564785)	+	L2a	LINE/L2	3288	3423	(3)	1859603
498	29.0	1.1	0.1	chr19	35107725	35107894	(23509722)	C	MIR	SINE/MIR	(72)	196	20	1859735
638	24.6	9.9	4.5	chr19	35114355	35114622	(23502994)	C	L1ME4b	LINE/L1	(18)	874	591	1859753
193	35.2	4.5	3.7	chr19	35115841	35115949	(23501667)	+	L3	LINE/CR1	1632	1741	(2358)	1859756
38	6.5	0.0	0.0	chr19	35135680	35135727	(23481889)	+	(ATG)n	Simple_repeat	1	48	(0)	1859792
338	31.5	4.0	5.8	chr19	35141669	35141878	(23475738)	C	L2b	LINE/L2	(10)	3377	3192	1859805
19	15.3	4.5	0.0	chr19	35142793	35142836	(23474780)	+	GA-rich	Low_complexity	1	46	(0)	1859807
19	21.8	1.6	3.2	chr19	35142957	35143018	(23474598)	+	(CGCCCC)n	Simple_repeat	1	63	(0)	1859808
23	14.9	0.0	6.7	chr19	35143133	35143192	(23474424)	+	G-rich	Low_complexity	1	60	(0)	1859809
31	22.3	4.8	4.9	chr19	35152594	35152735	(23464881)	+	GA-rich	Low_complexity	1	141	(0)	1859829
322	30.1	2.8	10.2	chr19	35210941	35211042	(23406574)	+	HAL1	LINE/L1	2253	2348	(159)	1859947
2037	11.0	0.3	6.3	chr19	35211043	35211185	(23406431)	+	AluJr	SINE/Alu	2	127	(185)	1859948
361	25.0	3.3	10.1	chr19	35225442	35225529	(23392087)	+	MIRb	SINE/MIR	68	147	(121)	1859981
454	28.2	7.6	7.2	chr19	35274438	35274509	(23343107)	C	MER102a	DNA/hAT-Charlie	(3)	327	271	1860073
1531	17.8	3.0	4.9	chr19	35274510	35274813	(23342803)	+	AluJb	SINE/Alu	1	298	(14)	1860074
2150	11.7	0.0	0.0	chr19	35318066	35318347	(23299269)	C	AluSx	SINE/Alu	(29)	283	2	1860173
2216	11.2	2.6	0.0	chr19	35318367	35318662	(23298954)	C	AluSz	SINE/Alu	(8)	304	1	1860174
293	36.9	0.0	3.5	chr19	35362602	35362716	(23254900)	+	LTR78	LTR/ERV1	831	941	(363)	1860256
255	21.4	4.5	5.6	chr19	35509408	35509496	(23108120)	+	MER5A1	DNA/hAT-Charlie	41	128	(38)	1860570
471	28.4	4.0	2.9	chr19	35519268	35519441	(23098175)	+	MIRb	SINE/MIR	54	229	(39)	1860587
13	14.5	3.8	7.3	chr19	35645097	35645149	(22972467)	+	(GCCCCAA)n	Simple_repeat	1	55	(0)	1860832
20	0.0	0.0	0.0	chr19	35666419	35666440	(22951176)	+	(AC)n	Simple_repeat	1	22	(0)	1860896
610	26.4	4.4	1.8	chr19	35673603	35673834	(22943782)	C	MIR	SINE/MIR	(23)	245	3	1860923
11	27.6	0.0	0.0	chr19	35755528	35755566	(22862050)	+	(GGCTGG)n	Simple_repeat	1	39	(0)	1861076
2148	10.7	0.7	2.3	chr19	35758661	35758970	(22858646)	C	AluSx1	SINE/Alu	(6)	306	2	1861079
19	21.2	1.5	4.5	chr19	35784773	35784837	(22832779)	+	(CCCTGCC)n	Simple_repeat	1	66	(0)	1861144
14	24.0	2.5	7.3	chr19	35784838	35784848	(22832768)	+	(CCCG)n	Simple_repeat	5	82	(0)	1861145
11	5.6	12.2	4.3	chr19	35784869	35784909	(22832707)	+	(GGCGCTT)n	Simple_repeat	1	46	(0)	1861146
243	23.7	9.5	3.8	chr19	35820006	35820057	(22797559)	+	L2	LINE/L2	2339	2396	(1023)	1861233
62	0.0	0.0	0.0	chr19	35820058	35820110	(22797506)	+	(AC)n	Simple_repeat	1	53	(0)	1861234
243	23.7	9.5	3.8	chr19	35820111	35820136	(22797480)	+	L2	LINE/L2	2397	2422	(997)	1861233
368	26.9	4.4	0.0	chr19	35820143	35820272	(22797344)	+	MER20B	DNA/hAT-Charlie	7	142	(641)	1861235
812	18.1	0.7	0.0	chr19	35844843	35844975	(22772641)	+	AluJr	SINE/Alu	1	134	(178)	1861302
1771	16.0	0.0	0.8	chr19	35844987	35845254	(22772362)	+	AluJo	SINE/Alu	2	267	(45)	1861303
2404	8.4	0.3	0.0	chr19	35884403	35884701	(22732915)	C	AluSp	SINE/Alu	(11)	302	3	1861366
1602	19.3	4.4	9.6	chr19	35884702	35884862	(22732754)	C	MLT1A0	LTR/ERVL-MaLR	(218)	147	1	1861364
800	9.7	0.0	23.7	chr19	35947304	35947510	(22670106)	+	AluJr	SINE/Alu	140	297	(15)	1861521
49	0.0	0.0	0.0	chr19	35947598	35947639	(22669977)	+	(GT)n	Simple_repeat	1	42	(0)	1861522
1868	8.6	7.9	0.0	chr19	35947640	35947894	(22669722)	C	AluSc8	SINE/Alu	(34)	277	1	1861523
1083	15.2	0.5	5.1	chr19	35987472	35987668	(22629948)	+	AluJb	SINE/Alu	120	307	(5)	1861621
9976	3.5	0.1	18.9	chr19	36068352	36070054	(22547562)	C	SVA_C	Retroposon/SVA	(0)	1384	1	1861804
757	33.1	10.8	4.5	chr19	36070670	36070925	(22546691)	C	Kanga11a	DNA/TcMar-Tc2	(439)	531	244	1861806
467	28.8	12.5	5.7	chr19	36104089	36104438	(22513178)	C	L2a	LINE/L2	(0)	3426	3050	1861883
301	32.0	11.5	6.0	chr19	36136861	36137162	(22480454)	C	L2c	LINE/L2	(130)	3257	2937	1861954
19	21.8	5.0	1.6	chr19	36604933	36604992	(22012624)	+	(CA)n	Simple_repeat	1	63	(0)	1862875
18	19.3	2.3	2.3	chr19	36605646	36605688	(22011928)	+	(CG)n	Simple_repeat	1	44	(0)	1862877
320	20.9	2.9	0.0	chr19	36850363	36850429	(21767187)	C	MER67D	LTR/ERV1	(1)	513	445	1863382
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
598	33.4	4.5	2.7	chr19	38004339	38004704	(20612912)	C	MLT1K	LTR/ERVL-MaLR	(19)	576	204	1865600
891	20.6	5.5	0.0	chr19	38224788	38224968	(20392648)	+	MIR	SINE/MIR	37	228	(34)	1866147
21	17.9	6.8	2.5	chr19	38226235	38226308	(20391308)	+	(CCCCTT)n	Simple_repeat	1	79	(0)	1866153
27	24.6	1.1	3.2	chr19	38226309	38226325	(20391291)	+	(CCCCCTC)n	Simple_repeat	2	93	(0)	1866154
42	0.0	0.0	0.0	chr19	38226504	38226539	(20391077)	+	(AC)n	Simple_repeat	1	36	(0)	1866155
982	26.2	9.4	5.1	chr19	38265775	38266261	(20351355)	C	L2a	LINE/L2	(0)	3426	2917	1866265
829	6.8	0.0	1.0	chr19	38266291	38266393	(20351223)	+	AluSq	SINE/Alu	198	299	(14)	1866266
1399	26.2	19.7	0.1	chr19	38267372	38268154	(20349462)	C	L2a	LINE/L2	(2200)	1219	246	1866265
472	24.3	10.4	1.4	chr19	38300909	38301135	(20316481)	+	L2a	LINE/L2	2856	3113	(313)	1866339
2226	8.3	5.6	0.0	chr19	38301139	38301426	(20316190)	C	AluSx1	SINE/Alu	(7)	305	1	1866340
967	18.1	3.4	7.0	chr19	38316237	38316451	(20301165)	+	AluJo	SINE/Alu	14	220	(92)	1866379
19	31.0	0.0	1.4	chr19	38336494	38336564	(20281052)	+	G-rich	Low_complexity	1	71	(0)	1866435
14	10.2	0.0	8.1	chr19	38434673	38434709	(20182907)	+	G-rich	Low_complexity	1	37	(0)	1866653
586	31.3	13.2	0.6	chr19	38557237	38557586	(20060030)	C	L2a	LINE/L2	(1)	3425	3025	1866941
2249	12.7	0.3	0.0	chr19	38644533	38644839	(19972777)	+	AluSx	SINE/Alu	1	308	(4)	1867176
27	0.0	0.0	0.0	chr19	38644842	38644867	(19972749)	+	(CTGGG)n	Simple_repeat	1	26	(0)	1867177
1151	25.1	5.0	3.9	chr19	38644914	38645348	(19972268)	C	L2a	LINE/L2	(531)	2888	2449	1867170
18	25.9	4.2	2.7	chr19	38647566	38647637	(19969979)	+	(GC)n	Simple_repeat	1	75	(0)	1867185
11	20.5	5.1	0.0	chr19	38720160	38720198	(19897418)	+	(CCCTCAC)n	Simple_repeat	1	41	(0)	1867301
569	16.4	0.3	2.9	chr19	38744944	38745062	(19872554)	C	AluJb	SINE/Alu	(82)	220	1	1867337
917	12.2	0.0	4.3	chr19	38745133	38745271	(19872345)	C	FLAM_C	SINE/Alu	(10)	133	1	1867338
2088	11.3	0.3	0.0	chr19	38767021	38767302	(19850314)	C	AluSq2	SINE/Alu	(30)	283	1	1867393
1028	24.6	9.2	8.9	chr19	38767303	38767491	(19850125)	+	L1ME2	LINE/L1	5924	6119	(45)	1867378
2386	10.0	0.0	0.0	chr19	38767492	38767801	(19849815)	C	AluSx	SINE/Alu	(2)	310	1	1867394
2117	11.7	1.0	2.0	chr19	38862288	38862419	(19755197)	C	AluSz	SINE/Alu	(174)	138	4	1867605
2506	14.7	0.5	0.7	chr19	38862477	38862887	(19754729)	C	LTR35A	LTR/ERV1	(0)	547	138	1867607
13	22.6	2.4	0.0	chr19	38880924	38880964	(19736652)	+	(GCCCCC)n	Simple_repeat	1	42	(0)	1867657
646	11.1	1.1	0.0	chr19	38887455	38887544	(19730072)	C	AluJo	SINE/Alu	(200)	112	22	1867675
2314	9.7	1.3	1.0	chr19	38887745	38888053	(19729563)	C	AluSg	SINE/Alu	(0)	310	1	1867676
235	17.4	2.1	0.0	chr19	38946612	38946657	(19670959)	+	L2c	LINE/L2	3113	3159	(228)	1867805
638	20.9	8.7	0.7	chr19	38949535	38949682	(19667934)	C	AluSg4	SINE/Alu	(15)	295	135	1867814
645	27.6	2.1	9.5	chr19	39122779	39123097	(19494519)	+	L1ME4a	LINE/L1	5601	5894	(230)	1868322
2216	12.0	0.3	0.3	chr19	39123098	39123397	(19494219)	+	AluSp	SINE/Alu	1	300	(13)	1868323
28	0.0	0.0	0.0	chr19	39136756	39136782	(19480834)	+	(TGAC)n	Simple_repeat	1	27	(0)	1868359
220	27.7	15.0	3.0	chr19	39136819	39136982	(19480634)	C	L2b	LINE/L2	(203)	3172	2986	1868357
16	8.1	10.3	0.0	chr19	39156580	39156618	(19460998)	+	(CCCAGC)n	Simple_repeat	1	43	(0)	1868412
259	24.6	6.9	1.6	chr19	39170865	39170988	(19446628)	+	MER102b	DNA/hAT-Charlie	196	326	(15)	1868449
884	26.4	5.3	5.0	chr19	39191442	39191516	(19426100)	C	L1ME1	LINE/L1	(287)	5892	5818	1868493
2218	11.9	0.3	1.0	chr19	39191517	39191827	(19425789)	+	AluJb	SINE/Alu	1	309	(3)	1868494
14	13.1	0.0	0.0	chr19	39193950	39193975	(19423641)	+	(CCT)n	Simple_repeat	1	26	(0)	1868500
502	24.8	1.4	11.3	chr19	39195043	39195290	(19422326)	+	MIR	SINE/MIR	47	262	(0)	1868504
60	24.3	4.3	4.1	chr19	39342375	39342630	(19274986)	+	(CGG)n	Simple_repeat	1	267	(0)	1868896
17	27.4	2.2	5.3	chr19	39409702	39409793	(19207823)	+	G-rich	Low_complexity	1	94	(0)	1869013
14	29.4	1.1	6.4	chr19	40217097	40217189	(18400427)	+	(CTGCC)n	Simple_repeat	1	94	(0)	1870513
12	18.1	0.0	3.0	chr19	40218031	40218063	(18399553)	+	G-rich	Low_complexity	1	33	(0)	1870514
229	26.3	9.5	3.1	chr19	40224858	40224955	(18392661)	+	L2b	LINE/L2	2363	2467	(952)	1870534
2344	8.8	1.0	0.0	chr19	40225063	40225358	(18392258)	C	AluSx	SINE/Alu	(13)	299	1	1870535
18	11.8	2.6	2.5	chr19	40232443	40232481	(18385135)	+	(ACCCC)n	Simple_repeat	1	40	(0)	1870545
1829	14.9	0.0	5.4	chr19	40358089	40358259	(18259357)	C	AluJb	SINE/Alu	(14)	298	144	1870864
2154	10.6	4.9	0.0	chr19	40358260	40358551	(18259065)	C	AluSq2	SINE/Alu	(6)	307	1	1870865
948	26.6	6.9	0.8	chr19	40360036	40360387	(18257229)	+	L2a	LINE/L2	2429	2803	(616)	1870870
13	9.8	9.1	0.0	chr19	40444351	40444383	(18173233)	+	(AGCCGCG)n	Simple_repeat	1	36	(0)	1871078
493	33.0	6.2	5.2	chr19	40445674	40445945	(18171671)	+	L2b	LINE/L2	3094	3368	(7)	1871082
12	17.0	2.9	2.8	chr19	40446172	40446206	(18171410)	+	(TAGG)n	Simple_repeat	1	36	(0)	1871083
2274	11.3	0.0	0.0	chr19	40447051	40447352	(18170264)	C	AluSz	SINE/Alu	(10)	302	1	1871086
2445	6.6	0.7	0.3	chr19	40447374	40447678	(18169938)	+	AluYh3	SINE/Alu	1	306	(5)	1871087
1464	8.8	0.5	6.6	chr19	40489003	40489230	(18128386)	+	AluSx3	SINE/Alu	98	311	(0)	1871221
2074	11.7	0.0	0.7	chr19	40489387	40489685	(18127931)	C	AluSz	SINE/Alu	(13)	299	3	1871222
872	27.7	8.3	4.8	chr19	40523132	40523330	(18094286)	C	L2a	LINE/L2	(215)	3211	3011	1871310
2377	9.9	0.0	0.0	chr19	40541914	40542216	(18075400)	C	AluSx	SINE/Alu	(4)	308	6	1871365
14	20.5	2.6	0.0	chr19	40542221	40542259	(18075357)	+	(TCTCTG)n	Simple_repeat	1	40	(0)	1871366
13	20.6	4.9	4.7	chr19	40570594	40570654	(18046962)	+	(CCGGCC)n	Simple_repeat	1	64	(0)	1871443
243	32.7	3.2	1.7	chr19	40598566	40598696	(18018920)	C	MIR3	SINE/MIR	(136)	132	2	1871499
1675	15.5	1.9	0.8	chr19	40604575	40604838	(18012778)	+	AluJr	SINE/Alu	14	280	(32)	1871505
17	11.6	0.0	7.0	chr19	40609984	40610026	(18007590)	+	(CTGCC)n	Simple_repeat	1	43	(0)	1871511
352	28.9	5.8	2.4	chr19	40628077	40628226	(17989390)	+	MIRb	SINE/MIR	28	185	(83)	1871545
2211	8.7	2.0	0.0	chr19	40662554	40662841	(17954775)	C	AluSx1	SINE/Alu	(17)	295	2	1871650
15	25.0	0.0	2.0	chr19	40663310	40663358	(17954258)	+	G-rich	Low_complexity	1	49	(0)	1871651
494	6.7	0.0	0.0	chr19	40787121	40787180	(17830436)	+	AluYk11	SINE/Alu	1	60	(251)	1871957
2400	9.6	0.0	0.0	chr19	40787253	40787555	(17830061)	+	AluSq2	SINE/Alu	1	303	(10)	1871958
415	30.3	8.7	5.9	chr19	40805397	40805632	(17811984)	C	MIR	SINE/MIR	(31)	237	1	1871999
2192	11.4	0.7	0.7	chr19	40832260	40832557	(17785059)	+	AluSx1	SINE/Alu	2	299	(13)	1872046
22	18.4	0.0	2.0	chr19	41193287	41193337	(17424279)	+	(CGCTGC)n	Simple_repeat	1	51	(0)	1872844
13	8.5	4.0	0.0	chr19	41427388	41427412	(17190204)	+	(GCCCA)n	Simple_repeat	1	26	(0)	1873409
17	21.5	1.5	6.0	chr19	41427414	41427479	(17190137)	+	G-rich	Low_complexity	1	67	(0)	1873410
29	21.8	4.7	2.7	chr19	41427480	41427517	(17190099)	+	GA-rich	Low_complexity	3	111	(0)	1873411
382	28.9	9.6	6.6	chr19	41706945	41707365	(16910251)	+	L2a	LINE/L2	2940	3419	(7)	1873776
13	20.5	4.3	2.0	chr19	41708505	41708551	(16909065)	+	GA-rich	Low_complexity	1	49	(0)	1873777
384	28.6	15.4	0.9	chr19	41843209	41843428	(16774188)	+	MIRc	SINE/MIR	6	257	(5)	1874029
13	27.0	0.0	2.2	chr19	41843448	41843493	(16774123)	+	(TCCC)n	Simple_repeat	1	46	(0)	1874030
344	33.2	15.1	0.5	chr19	41875511	41875879	(16741737)	C	L1ME3Cz	LINE/L1	(164)	833	402	1874100
19	30.1	2.3	3.4	chr19	41886970	41887056	(16730560)	+	GA-rich	Low_complexity	1	89	(0)	1874127
29	14.8	0.0	9.0	chr19	41920899	41920995	(16696621)	+	(CTCTGT)n	Simple_repeat	1	88	(0)	1874174
18	22.0	4.0	4.6	chr19	41940207	41940281	(16677335)	+	G-rich	Low_complexity	1	74	(0)	1874215
2379	10.5	0.3	0.0	chr19	41961254	41961558	(16656058)	C	AluSg	SINE/Alu	(4)	306	1	1874257
1912	11.8	8.0	0.3	chr19	41961614	41961901	(16655715)	+	AluSz6	SINE/Alu	1	312	(0)	1874258
2007	12.5	1.0	0.7	chr19	42074887	42075182	(16542434)	C	AluSz	SINE/Alu	(15)	297	1	1874518
13	24.1	3.1	4.5	chr19	42095997	42096060	(16521556)	+	(CCGCCCA)n	Simple_repeat	1	66	(0)	1874555
17	15.6	2.1	4.2	chr19	42133305	42133351	(16484265)	+	(CCCCT)n	Simple_repeat	1	48	(0)	1874651
18	19.6	0.0	8.6	chr19	42179491	42179560	(16438056)	+	G-rich	Low_complexity	1	70	(0)	1874744
935	27.8	6.5	6.5	chr19	42199895	42200400	(16417216)	+	L2a	LINE/L2	2924	3426	(0)	1874787
264	25.6	0.0	21.5	chr19	42218668	42218750	(16398866)	+	MIR3	SINE/MIR	34	89	(119)	1874826
21	7.3	6.7	2.1	chr19	42233237	42233286	(16384330)	+	(GCCCCA)n	Simple_repeat	1	52	(0)	1874857
12	18.7	2.1	6.1	chr19	42254041	42254088	(16363528)	+	G-rich	Low_complexity	1	49	(0)	1874889
538	28.8	4.0	3.0	chr19	42282651	42282847	(16334769)	+	MIRb	SINE/MIR	47	245	(23)	1874954
12	12.8	5.6	2.6	chr19	42325733	42325768	(16291848)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1875034
366	22.6	7.1	2.0	chr19	42396641	42396773	(16220843)	+	MSR1	Satellite	1	139	(3)	1875197
2343	11.6	3.2	1.6	chr19	42548237	42548605	(16069011)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1875496
12	16.6	0.0	0.0	chr19	43438496	43438522	(15179094)	+	(TATC)n	Simple_repeat	1	27	(0)	1876760
738	16.8	12.3	0.0	chr19	43525641	43525789	(15091827)	C	MER96	DNA/hAT-Tip100	(0)	175	6	1877014
399	30.3	10.4	4.8	chr19	43572264	43572471	(15045145)	C	MIRc	SINE/MIR	(0)	268	48	1877138
636	23.0	24.4	1.5	chr19	43610031	43610198	(15007418)	+	L2a	LINE/L2	2985	3221	(205)	1877230
2203	13.0	0.0	0.0	chr19	43610199	43610498	(15007118)	C	AluSz	SINE/Alu	(11)	301	2	1877231
314	24.8	16.9	0.0	chr19	43670360	43670472	(14947144)	+	MIR	SINE/MIR	17	152	(110)	1877380
183	32.7	5.6	3.8	chr19	43765460	43765564	(14852052)	+	MIR1_Amn	SINE/MIR	52	158	(72)	1877621
13	18.9	2.8	0.0	chr19	43766656	43766691	(14850925)	+	(GCCCCA)n	Simple_repeat	1	37	(0)	1877624
12	8.4	0.0	6.9	chr19	43774647	43774675	(14842941)	+	(GGTCA)n	Simple_repeat	1	29	(0)	1877645
17	17.2	0.0	2.4	chr19	43774730	43774779	(14842837)	+	GA-rich	Low_complexity	1	48	(0)	1877646
12	19.4	0.0	5.1	chr19	43781033	43781071	(14836545)	+	(GGCAG)n	Simple_repeat	1	39	(0)	1877659
660	6.8	3.8	0.4	chr19	43784735	43785133	(14832483)	C	MSR1	Satellite	(40)	412	1	1877665
37	0.0	0.0	0.0	chr19	43901552	43901583	(14716033)	+	(CA)n	Simple_repeat	1	32	(0)	1877885
250	28.6	6.0	2.3	chr19	44072499	44072627	(14544989)	+	MIR	SINE/MIR	91	224	(38)	1878152
355	25.6	8.8	0.6	chr19	44165401	44165557	(14452059)	+	MIR	SINE/MIR	61	231	(31)	1878310
738	25.8	11.0	2.0	chr19	44596576	44597090	(14020526)	C	L2a	LINE/L2	(41)	3385	2813	1879076
682	19.0	0.8	4.4	chr19	44597096	44597232	(14020384)	C	AluJb	SINE/Alu	(9)	303	172	1879077
12	12.0	0.0	6.5	chr19	44745521	44745551	(13872065)	+	(CTCC)n	Simple_repeat	1	31	(0)	1879515
17	9.7	0.0	5.4	chr19	44747546	44747582	(13870034)	+	G-rich	Low_complexity	1	37	(0)	1879518
14	0.0	4.8	0.0	chr19	44747592	44747612	(13870004)	+	(CCTC)n	Simple_repeat	1	22	(0)	1879519
18	31.9	0.0	0.0	chr19	44748429	44748491	(13869125)	+	(CCCCC)n	Simple_repeat	1	63	(0)	1879522
14	28.8	0.0	0.0	chr19	44800462	44800508	(13817108)	+	(CCCCA)n	Simple_repeat	1	47	(0)	1879664
821	22.7	2.7	8.4	chr19	44807288	44807561	(13810055)	C	L2b	LINE/L2	(12)	3363	3106	1879680
928	26.5	7.0	1.9	chr19	44866481	44866889	(13750727)	C	L2a	LINE/L2	(281)	3145	2709	1879838
1587	16.4	0.7	7.7	chr19	44866891	44867021	(13750595)	+	AluJo	SINE/Alu	1	125	(187)	1879841
18	8.5	0.0	0.0	chr19	45039357	45039381	(13578235)	+	(A)n	Simple_repeat	1	25	(0)	1880309
29	25.4	2.6	3.4	chr19	45076340	45076453	(13541163)	+	(GGCG)n	Simple_repeat	1	117	(0)	1880404
394	33.5	4.4	2.3	chr19	45131428	45131604	(13486012)	+	MIRb	SINE/MIR	38	218	(50)	1880532
18	18.2	6.9	1.6	chr19	45170860	45170917	(13446699)	+	GA-rich	Low_complexity	1	62	(0)	1880599
2133	10.7	0.0	0.0	chr19	45171020	45171299	(13446317)	+	AluSz6	SINE/Alu	1	280	(32)	1880600
2560	3.1	0.0	0.0	chr19	45248392	45248679	(13368937)	C	AluYc	SINE/Alu	(11)	288	1	1880808
1857	15.8	2.1	3.0	chr19	45248680	45248713	(13368903)	C	L1MB7	LINE/L1	(312)	5872	5839	1880807
2082	6.1	5.3	3.4	chr19	45307867	45308160	(13309456)	C	AluSx3	SINE/Alu	(11)	300	1	1880960
2131	13.4	0.0	0.3	chr19	45515539	45515836	(13101780)	C	AluJb	SINE/Alu	(14)	298	2	1881516
399	31.6	4.3	4.8	chr19	45515837	45516004	(13101612)	C	MIRb	SINE/MIR	(46)	222	50	1881515
12	9.1	4.2	0.0	chr19	45526464	45526487	(13091129)	+	(AGGA)n	Simple_repeat	1	25	(0)	1881542
401	29.6	0.8	0.0	chr19	45632504	45632628	(12984988)	C	Charlie10	DNA/hAT-Charlie	(2664)	158	33	1881847
12	12.6	0.0	3.6	chr19	45639451	45639478	(12978138)	+	(CCCGC)n	Simple_repeat	1	28	(0)	1881869
710	23.8	9.3	4.7	chr19	45639574	45639711	(12977905)	+	MIR	SINE/MIR	13	159	(103)	1881870
722	28.9	12.8	1.6	chr19	45681957	45682370	(12935246)	C	L2a	LINE/L2	(5)	3421	2960	1881987
2446	9.3	0.0	0.3	chr19	45684977	45685286	(12932330)	C	AluSc	SINE/Alu	(0)	309	1	1881993
911	11.3	0.8	0.8	chr19	45691538	45691670	(12925946)	C	FLAM_C	SINE/Alu	(10)	133	1	1882013
1911	11.3	8.4	0.0	chr19	45721844	45722117	(12895499)	C	AluSx1	SINE/Alu	(13)	299	1	1882088
70	0.0	0.0	0.0	chr19	45770205	45770266	(12847350)	+	(CAG)n	Simple_repeat	1	62	(0)	1882221
12	16.3	7.0	2.2	chr19	45770291	45770333	(12847283)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	1882222
12	18.3	0.0	3.0	chr19	45770724	45770756	(12846860)	+	(CCCGCC)n	Simple_repeat	1	33	(0)	1882223
16	0.0	0.0	0.0	chr19	45863114	45863133	(12754483)	+	(CCG)n	Simple_repeat	1	20	(0)	1882442
255	31.5	6.7	1.8	chr19	45886406	45886518	(12731098)	+	MIR	SINE/MIR	34	152	(110)	1882487
25	22.7	1.2	4.7	chr19	45973881	45973998	(12643618)	+	(GGC)n	Simple_repeat	1	113	(0)	1882724
532	30.8	5.6	0.0	chr19	45994834	45995018	(12622598)	+	MIRb	SINE/MIR	58	253	(15)	1882788
265	29.0	9.0	3.7	chr19	46076937	46077072	(12540544)	C	LTR78	LTR/ERV1	(498)	806	663	1882931
894	30.1	4.0	6.3	chr19	46231593	46232126	(12385490)	C	PABL_B	LTR/ERV1	(1)	666	1	1883161
277	28.6	10.1	0.0	chr19	46299320	46299417	(12318199)	+	MIRb	SINE/MIR	26	134	(134)	1883318
258	20.5	8.4	5.3	chr19	46346567	46346670	(12270946)	C	MIRc	SINE/MIR	(57)	151	49	1883450
13	9.8	0.0	0.0	chr19	46403961	46403982	(12213634)	+	(CTG)n	Simple_repeat	1	22	(0)	1883574
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
710	19.7	7.3	0.7	chr19	46574476	46574628	(12042988)	C	MLT1B	LTR/ERVL-MaLR	(10)	495	332	1884031
959	11.4	5.4	1.9	chr19	46574651	46574811	(12042805)	+	THE1C	LTR/ERVL-MaLR	1	167	(208)	1884032
2145	11.0	1.7	0.0	chr19	46574826	46575116	(12042500)	+	AluSx1	SINE/Alu	1	296	(16)	1884033
243	27.5	0.0	4.2	chr19	46600396	46600467	(12017149)	+	L2b	LINE/L2	3305	3373	(2)	1884095
308	20.9	0.0	0.0	chr19	47006046	47006112	(11611504)	C	MER117	DNA/hAT-Charlie	(124)	73	7	1885042
12	18.4	5.4	0.0	chr19	47021179	47021215	(11596401)	+	(GCCCCGG)n	Simple_repeat	1	39	(0)	1885084
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
15	12.0	0.0	3.3	chr19	47112359	47112388	(11505228)	+	(CCT)n	Simple_repeat	1	30	(0)	1885279
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
236	31.0	6.5	6.0	chr19	47227046	47227213	(11390403)	C	MIR1_Amn	SINE/MIR	(51)	179	11	1885598
13	15.2	2.5	4.9	chr19	47230400	47230439	(11387177)	+	(GCCC)n	Simple_repeat	1	41	(0)	1885599
29	0.0	0.0	3.1	chr19	47231234	47231265	(11386351)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1885601
2593	15.0	0.2	2.7	chr19	47289570	47289947	(11327669)	C	MER66B	LTR/ERV1	(86)	400	27	1885762
6407	14.0	2.0	1.5	chr19	47289950	47290265	(11327351)	+	L1M1	LINE/L1	759	1071	(6494)	1885764
798	26.6	8.4	1.4	chr19	47364066	47364351	(11253265)	C	MLT1J2	LTR/ERVL-MaLR	(140)	308	1	1885986
1171	26.7	6.8	13.2	chr19	47438912	47439245	(11178371)	+	MLT1J2	LTR/ERVL-MaLR	4	359	(89)	1886162
13	10.4	2.9	5.6	chr19	47457597	47457631	(11159985)	+	(GCGG)n	Simple_repeat	1	36	(0)	1886213
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
230	20.0	0.0	0.0	chr19	47483859	47483903	(11133713)	C	MER117	DNA/hAT-Charlie	(95)	102	58	1886269
269	24.7	7.9	4.1	chr19	47607891	47607987	(11009629)	C	L2a	LINE/L2	(0)	3426	3326	1886565
194	29.0	8.6	0.9	chr19	47607981	47608088	(11009528)	+	L2b	LINE/L2	3249	3365	(10)	1886566
472	26.7	1.5	1.5	chr19	47624525	47624657	(10992959)	C	Tigger1a_Art	DNA/TcMar-Tigger	(334)	163	31	1886614
1819	16.4	0.3	0.7	chr19	47624695	47624992	(10992624)	C	AluJb	SINE/Alu	(14)	298	2	1886615
12	6.8	9.1	2.8	chr19	47693626	47693658	(10923958)	+	(TGGC)n	Simple_repeat	1	36	(0)	1886794
12	29.5	1.6	3.2	chr19	47693663	47693723	(10923893)	+	(CTGC)n	Simple_repeat	1	62	(0)	1886795
13	26.6	2.0	1.9	chr19	47729571	47729621	(10887995)	+	(GGCA)n	Simple_repeat	1	52	(0)	1886901
38	34.3	2.9	0.6	chr19	47729812	47729866	(10887750)	+	(TC)n	Simple_repeat	1	82	(98)	1886902
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
16	3.5	6.9	0.0	chr19	47813948	47813976	(10803640)	+	(GGTGGG)n	Simple_repeat	1	31	(0)	1887130
16	15.6	0.0	8.0	chr19	47813977	47813991	(10803625)	+	G-rich	Low_complexity	13	50	(0)	1887131
2341	10.3	0.0	0.3	chr19	47874259	47874560	(10743056)	+	AluSg	SINE/Alu	1	301	(9)	1887294
2508	6.5	0.0	0.3	chr19	48320955	48321264	(10296352)	+	AluSz	SINE/Alu	1	309	(3)	1888469
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
2223	10.9	0.0	0.3	chr19	48344714	48345007	(10272609)	C	AluSq2	SINE/Alu	(20)	293	1	1888519
277	23.5	1.2	15.8	chr19	48345008	48345053	(10272563)	+	MER91B	DNA/hAT-Tip100	145	178	(12)	1888518
15	28.6	2.3	4.5	chr19	48391489	48391575	(10226041)	+	G-rich	Low_complexity	1	89	(0)	1888647
2351	7.6	0.7	0.3	chr19	48415090	48415393	(10202223)	+	AluSx1	SINE/Alu	2	306	(6)	1888704
2124	9.3	0.7	0.0	chr19	48452082	48452397	(10165219)	C	AluSq	SINE/Alu	(0)	313	1	1888799
807	23.4	0.9	5.9	chr19	48513223	48513444	(10104172)	C	MIR	SINE/MIR	(13)	249	39	1888913
329	28.4	5.0	2.2	chr19	48678182	48678318	(9939298)	C	MLT1G	LTR/ERVL-MaLR	(346)	249	68	1889348
233	32.5	8.8	0.9	chr19	48678388	48678502	(9939114)	C	MIRc	SINE/MIR	(101)	167	43	1889349
25	12.8	3.9	0.0	chr19	48716738	48716788	(9900828)	+	GA-rich	Low_complexity	1	53	(0)	1889456
2419	7.6	0.0	0.7	chr19	48811212	48811514	(9806102)	+	AluSx1	SINE/Alu	2	302	(10)	1889666
218	32.0	1.3	0.0	chr19	48819789	48819863	(9797753)	+	L2a	LINE/L2	3306	3381	(45)	1889689
404	20.0	0.8	6.4	chr19	48868422	48868672	(9748944)	C	HERVIP10FH-int	LTR/ERV1	(4122)	980	744	1889822
345	25.0	4.3	2.2	chr19	48872961	48873050	(9744566)	C	MSR1	Satellite	(1)	110	19	1889836
388	23.8	0.0	2.4	chr19	48900397	48900652	(9716964)	C	MSR1	Satellite	(0)	249	1	1889899
913	27.4	10.5	3.2	chr19	49084893	49085054	(9532562)	+	L2a	LINE/L2	3262	3426	(0)	1890340
279	24.5	5.7	1.5	chr19	49125615	49125739	(9491877)	C	MSR1	Satellite	(0)	130	1	1890432
1960	12.9	5.8	0.0	chr19	49136315	49136608	(9481008)	+	AluSx1	SINE/Alu	1	312	(0)	1890449
13	19.8	0.0	2.7	chr19	49361581	49361617	(9255999)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1890948
12	27.1	1.8	3.5	chr19	49362096	49362152	(9255464)	+	(CACGCC)n	Simple_repeat	1	58	(0)	1890949
13	15.2	0.0	3.2	chr19	49441582	49441612	(9176004)	+	(GCCCC)n	Simple_repeat	1	31	(0)	1891100
821	14.5	0.0	8.3	chr19	49452002	49452146	(9165470)	+	FLAM_C	SINE/Alu	1	133	(10)	1891121
1708	14.8	5.6	0.4	chr19	49469266	49469536	(9148080)	C	AluJb	SINE/Alu	(14)	298	13	1891155
2836	19.2	5.3	1.2	chr19	49568001	49568594	(9049022)	C	Tigger9b	DNA/TcMar-Tigger	(1)	623	4	1891425
332	22.1	2.8	4.8	chr19	49640837	49640967	(8976649)	C	MSR1	Satellite	(0)	128	1	1891595
2565	4.9	0.3	0.0	chr19	49745902	49746206	(8871410)	+	AluY	SINE/Alu	1	306	(5)	1891841
240	35.6	3.4	1.7	chr19	49758331	49758447	(8859169)	C	MIRb	SINE/MIR	(104)	164	46	1891871
316	17.7	3.7	6.0	chr19	49800771	49800846	(8816770)	+	MIR	SINE/MIR	62	142	(126)	1891977
13	18.0	6.8	0.0	chr19	49808939	49808982	(8808634)	+	G-rich	Low_complexity	1	47	(0)	1891992
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
2214	12.6	0.0	0.0	chr19	49941940	49942233	(8675383)	+	AluSx1	SINE/Alu	3	296	(16)	1892260
2081	7.5	8.8	0.4	chr19	49942238	49942516	(8675100)	+	AluY	SINE/Alu	3	307	(4)	1892261
532	32.5	7.8	5.6	chr19	50167732	50168101	(8449515)	+	L1ME3	LINE/L1	5526	5911	(251)	1892832
12	28.5	3.6	0.0	chr19	50203737	50203791	(8413825)	+	(GCCGGCG)n	Simple_repeat	1	57	(0)	1892964
702	3.6	0.0	0.7	chr19	50434963	50435110	(8182506)	C	MSR1	Satellite	(20)	146	1	1893501
27	22.7	2.9	7.5	chr19	50686851	50686987	(7930629)	+	G-rich	Low_complexity	1	130	(0)	1894096
13	28.2	4.7	0.0	chr19	50821071	50821134	(7796482)	+	(CCTCCTC)n	Simple_repeat	1	67	(0)	1894401
15	11.6	0.0	0.0	chr19	50833629	50833656	(7783960)	+	(GGGGT)n	Simple_repeat	1	28	(0)	1894426
13	14.4	5.0	2.4	chr19	50833657	50833667	(7783949)	+	(GGTGGTGA)n	Simple_repeat	2	42	(0)	1894427
1960	13.4	0.0	5.3	chr19	51017706	51018025	(7599591)	+	AluJo	SINE/Alu	5	307	(5)	1894826
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
13	8.1	0.0	6.7	chr19	52962932	52962961	(5654655)	+	(GGGCG)n	Simple_repeat	1	30	(0)	1898549
26	32.8	1.6	1.6	chr19	53358300	53358423	(5259193)	+	(GCCCC)n	Simple_repeat	1	126	(0)	1899195
13	9.8	0.0	10.0	chr19	53431887	53431926	(5185690)	+	(CCGCC)n	Simple_repeat	1	40	(0)	1899347
928	9.7	0.8	0.0	chr19	53866838	53866961	(4750655)	C	AluJo	SINE/Alu	(185)	127	3	1900474
19	21.4	3.3	1.6	chr19	53867815	53867875	(4749741)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	1900475
23	13.3	1.9	3.7	chr19	53868843	53868895	(4748721)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1900477
15	17.0	0.0	0.0	chr19	53890024	53890056	(4727560)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	1900517
2430	6.3	0.0	0.7	chr19	53890259	53890558	(4727058)	C	AluSq2	SINE/Alu	(15)	298	1	1900518
410	21.9	6.6	4.5	chr19	54020087	54020220	(4597396)	C	L2	LINE/L2	(609)	2810	2674	1900847
626	12.9	1.9	0.0	chr19	55113917	55114318	(3503298)	+	MSR1	Satellite	1	409	(6)	1903028
22	23.9	3.5	0.0	chr19	55180268	55180324	(3437292)	+	(GT)n	Simple_repeat	1	59	(0)	1903171
196	29.7	1.5	1.5	chr19	55280120	55280184	(3337432)	C	OldhAT1	DNA/hAT-Ac	(750)	2098	2034	1903374
11	29.2	3.7	0.0	chr19	55354112	55354165	(3263451)	+	(CCCCTA)n	Simple_repeat	1	56	(0)	1903563
428	23.3	11.7	0.0	chr19	55461195	55461323	(3156293)	+	MIRc	SINE/MIR	41	186	(82)	1903779
13	20.0	2.0	5.8	chr19	55461724	55461774	(3155842)	+	(CTCTGC)n	Simple_repeat	1	52	(0)	1903780
14	16.8	1.5	10.4	chr19	55543753	55543818	(3073798)	+	(AACCC)n	Simple_repeat	1	67	(0)	1903962
2098	10.6	0.0	3.3	chr19	55604454	55604595	(3013021)	C	AluJb	SINE/Alu	(176)	136	1	1904128
19	23.5	0.0	4.6	chr19	55624644	55624708	(2992908)	+	G-rich	Low_complexity	1	65	(0)	1904169
15	10.4	3.0	2.9	chr19	55675287	55675319	(2942297)	+	(GGC)n	Simple_repeat	1	34	(0)	1904272
12	25.8	0.0	0.0	chr19	55675311	55675347	(2942269)	+	(GCGT)n	Simple_repeat	1	37	(0)	1904273
82	15.3	1.6	4.2	chr19	56538768	56538955	(2078661)	+	G-rich	Low_complexity	1	191	(0)	1905962
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
58	1.8	0.0	0.0	chr19	58229267	58229323	(388293)	+	(GGGTGGGACT)n	Simple_repeat	1	57	(0)	1909145
1720	12.1	5.4	3.1	chr19	58274863	58275354	(342262)	+	MER41G	LTR/ERV1	1	885	(0)	1909244
12	9.2	0.0	4.0	chr19	58347643	58347667	(269949)	+	(GGGC)n	Simple_repeat	1	25	(0)	1909381
14	35.6	0.0	0.0	chr19	58347672	58347738	(269878)	+	(CCGCGC)n	Simple_repeat	1	67	(0)	1909382
13	21.7	4.7	6.7	chr19	58408437	58408521	(209095)	+	(CAACGCC)n	Simple_repeat	1	89	(0)	1909481
13	15.3	4.1	5.9	chr2	950865	950913	(241242616)	+	(GGAGCC)n	Simple_repeat	1	51	(0)	1911760
1197	24.4	4.1	2.8	chr2	1701696	1702054	(240491475)	+	MLT1A0	LTR/ERVL-MaLR	2	365	(0)	1912426
13	20.2	6.7	3.1	chr2	1708115	1708174	(240485355)	+	(GGAGCT)n	Simple_repeat	1	64	(0)	1912431
12	21.6	0.0	4.9	chr2	8457208	8457248	(233736281)	+	G-rich	Low_complexity	1	41	(0)	1921414
1704	20.5	9.7	14.0	chr2	9136910	9137401	(233056128)	C	Tigger9b	DNA/TcMar-Tigger	(168)	456	4	1922405
1927	14.2	0.0	0.0	chr2	9283070	9283337	(232910192)	C	AluSx1	SINE/Alu	(4)	308	41	1922701
210	27.0	2.6	3.9	chr2	9693089	9693165	(232500364)	+	MIR3	SINE/MIR	128	203	(5)	1923454
19	22.6	1.6	3.2	chr2	9800023	9800083	(232393446)	+	(CTTCC)n	Simple_repeat	1	62	(0)	1923677
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
1179	18.0	1.5	8.9	chr2	10168052	10168332	(232025197)	+	MER31A	LTR/ERV1	216	475	(10)	1924308
392	27.1	4.3	5.7	chr2	10168451	10168591	(232024938)	C	MER34A	LTR/ERV1	(393)	178	40	1924306
291	23.8	0.4	1.2	chr2	10358261	10358342	(231835187)	C	FLAM_C	SINE/Alu	(149)	153	74	1924638
4165	12.2	6.2	10.2	chr2	10358347	10359176	(231834353)	+	LTR1A2	LTR/ERV1	44	837	(0)	1924639
14	8.2	0.0	3.6	chr2	10498012	10498039	(231695490)	+	(CGGGC)n	Simple_repeat	1	28	(0)	1924872
53	0.0	0.0	0.0	chr2	11132998	11133042	(231060487)	+	(CA)n	Simple_repeat	1	45	(0)	1926079
94	27.7	0.6	4.2	chr2	11155100	11155450	(231038079)	+	G-rich	Low_complexity	1	353	(0)	1926128
27	5.4	2.6	0.0	chr2	11344312	11344350	(230849179)	+	(GGCCC)n	Simple_repeat	1	40	(0)	1926452
2612	15.5	1.4	1.2	chr2	11431587	11432011	(230761518)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1926631
26	2.6	4.9	2.3	chr2	11746554	11746594	(230446935)	+	(TGCCCC)n	Simple_repeat	1	43	(0)	1927196
17	18.5	3.9	1.9	chr2	11746730	11746780	(230446749)	+	(GGCGG)n	Simple_repeat	1	53	(0)	1927197
1923	29.0	13.0	8.8	chr2	15243543	15244790	(226948739)	+	MLT1J1-int	LTR/ERVL-MaLR	46	1353	(34)	1932423
13304	10.2	8.6	3.2	chr2	20415458	20415981	(221777548)	C	L1PBa	LINE/L1	(5668)	1195	621	1940325
14	10.3	3.0	2.9	chr2	20651130	20651162	(221542367)	+	(CCCTG)n	Simple_repeat	1	34	(0)	1940695
15	26.3	2.7	4.0	chr2	24049632	24049704	(218143825)	+	(GCCCC)n	Simple_repeat	1	75	(0)	1945412
13	20.0	0.0	9.7	chr2	24049746	24049807	(218143722)	+	(GGCGG)n	Simple_repeat	1	62	(0)	1945413
191	27.6	8.4	4.4	chr2	24490668	24490826	(217702703)	C	MIR3	SINE/MIR	(42)	166	1	1946256
19	22.1	0.0	0.0	chr2	24490925	24490971	(217702558)	+	G-rich	Low_complexity	1	47	(0)	1946257
34	0.0	0.0	0.0	chr2	24920245	24920276	(217273253)	+	(CGGGAGG)n	Simple_repeat	1	32	(0)	1946947
39	23.4	4.7	5.0	chr2	24920314	24920505	(217273024)	+	G-rich	Low_complexity	1	201	(0)	1946948
14	27.2	1.4	5.4	chr2	25315134	25315206	(216878323)	+	(CCCTTC)n	Simple_repeat	1	74	(0)	1947710
581	25.2	9.8	1.8	chr2	25954631	25954794	(216238735)	C	MIR3	SINE/MIR	(7)	201	33	1948972
267	26.4	14.6	0.0	chr2	26172371	26172499	(216021030)	+	MIRc	SINE/MIR	25	175	(93)	1949477
30	17.0	0.0	0.0	chr2	26245248	26245300	(215948229)	+	(GT)n	Simple_repeat	1	53	(0)	1949599
1952	17.0	0.3	0.7	chr2	26355746	26356039	(215837490)	C	AluJb	SINE/Alu	(17)	295	3	1949813
15	13.0	2.8	2.7	chr2	26576586	26576621	(215616908)	+	(GCCCCA)n	Simple_repeat	1	37	(0)	1950166
16	22.3	4.0	5.1	chr2	27071773	27071847	(215121682)	+	(GGCTGG)n	Simple_repeat	1	78	(0)	1951130
1430	19.0	0.8	1.9	chr2	27353754	27354022	(214839507)	C	AluJb	SINE/Alu	(46)	266	1	1951650
17	22.5	0.0	0.0	chr2	27354037	27354072	(214839457)	+	A-rich	Low_complexity	1	36	(0)	1951651
1227	16.2	0.0	3.3	chr2	27354080	27354289	(214839240)	+	AluJr4	SINE/Alu	87	289	(23)	1951652
16	14.5	0.0	0.0	chr2	28377300	28377330	(213816199)	+	(GGCAG)n	Simple_repeat	1	31	(0)	1953453
1537	15.2	8.7	5.0	chr2	28950838	28951134	(213242395)	C	AluJb	SINE/Alu	(3)	309	1	1954541
584	32.2	18.3	2.1	chr2	29114093	29114603	(213078926)	+	L3	LINE/CR1	3435	4046	(53)	1954821
834	25.1	6.4	9.2	chr2	30455314	30455585	(211737944)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	204	1957045
1937	14.7	0.6	3.8	chr2	30455618	30455937	(211737592)	+	AluJo	SINE/Alu	1	310	(2)	1957046
28	16.9	0.0	0.0	chr2	31138378	31138430	(211055099)	+	(CGC)n	Simple_repeat	1	53	(0)	1958026
4473	22.3	2.6	5.5	chr2	32976419	32977885	(209215644)	C	L1PA14	LINE/L1	(5258)	1435	55	1961277
3508	16.2	2.3	7.9	chr2	37859055	37859712	(204333817)	C	LTR1F1	LTR/ERV1	(0)	729	110	1968348
357	22.0	12.8	11.8	chr2	42558855	42558970	(199634559)	+	MER5B	DNA/hAT-Charlie	54	174	(4)	1975859
854	28.4	3.9	5.5	chr2	42558971	42559195	(199634334)	+	L2a	LINE/L2	2213	2437	(982)	1975858
1413	16.2	0.0	6.6	chr2	42584610	42584880	(199608649)	+	AluJb	SINE/Alu	30	282	(30)	1975925
1078	10.1	0.0	0.0	chr2	42584936	42585073	(199608456)	C	AluSx	SINE/Alu	(16)	296	159	1975926
2334	9.1	0.0	0.0	chr2	43160123	43160419	(199033110)	C	AluSc8	SINE/Alu	(14)	297	1	1977004
18	4.8	0.0	0.0	chr2	45345409	45345430	(196848099)	+	(AC)n	Simple_repeat	1	22	(0)	1980584
12	8.4	0.0	6.9	chr2	45345518	45345546	(196847983)	+	G-rich	Low_complexity	1	29	(0)	1980585
31	0.0	0.0	8.3	chr2	46172468	46172515	(196021014)	+	(GGCCTGGGC)n	Simple_repeat	1	48	(0)	1981837
46	2.3	0.0	0.0	chr2	46987810	46987853	(195205676)	+	(GT)n	Simple_repeat	1	44	(0)	1983205
16	0.0	0.0	0.0	chr2	47175082	47175098	(195018431)	+	(T)n	Simple_repeat	1	17	(0)	1983479
14	7.8	3.7	0.0	chr2	47369093	47369119	(194824410)	+	(GGGGC)n	Simple_repeat	1	28	(0)	1983925
24	12.3	2.3	0.0	chr2	48440801	48440844	(193752685)	+	(GGC)n	Simple_repeat	1	45	(0)	1985972
189	30.4	8.0	0.0	chr2	48529342	48529410	(193664119)	C	MIRc	SINE/MIR	(133)	135	61	1986143
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
14	14.9	9.2	4.2	chr2	62296756	62296820	(179896709)	+	G-rich	Low_complexity	1	71	(0)	2006212
25	17.5	0.0	0.0	chr2	62296868	62296912	(179896617)	+	(TC)n	Simple_repeat	1	45	(0)	2006213
11	14.1	0.0	8.1	chr2	63050325	63050361	(179143168)	+	G-rich	Low_complexity	1	37	(0)	2007375
184	29.6	5.8	1.0	chr2	64859572	64859670	(177333859)	C	MIRb	SINE/MIR	(124)	144	41	2010076
14	24.5	0.0	2.2	chr2	64876469	64876513	(177317016)	+	(CTCCTC)n	Simple_repeat	1	45	(0)	2010113
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
368	27.8	11.0	1.2	chr2	69436826	69436990	(172756539)	+	MIR3	SINE/MIR	11	201	(7)	2017105
12	17.6	0.0	0.0	chr2	69770257	69770283	(172423246)	+	GA-rich	Low_complexity	1	27	(0)	2017725
280	27.5	21.2	2.1	chr2	69989712	69989897	(172203632)	+	L2c	LINE/L2	3137	3379	(8)	2018123
2703	3.6	0.0	0.0	chr2	70257601	70257904	(171935625)	C	AluYm1	SINE/Alu	(7)	304	1	2018745
28	26.2	0.0	2.3	chr2	70258014	70258099	(171935430)	+	(GGCGG)n	Simple_repeat	1	86	(0)	2018746
14	14.1	0.0	3.0	chr2	70302019	70302051	(171891478)	+	(CCGCG)n	Simple_repeat	1	33	(0)	2018832
12	17.6	3.1	0.0	chr2	70767439	70767470	(171426059)	+	(CGCCC)n	Simple_repeat	1	33	(0)	2019581
21	28.1	3.4	1.1	chr2	70767477	70767490	(171426039)	+	(GAGGC)n	Simple_repeat	1	26	(65)	2019582
22	10.5	2.3	2.2	chr2	70767491	70767534	(171425995)	+	G-rich	Low_complexity	1	45	(0)	2019583
21	28.1	3.4	1.1	chr2	70767535	70767565	(171425964)	+	(GAGGC)n	Simple_repeat	27	91	(0)	2019582
239	22.5	11.1	3.6	chr2	71452824	71452906	(170740623)	+	L1ME4a	LINE/L1	5537	5626	(498)	2020665
209	22.2	4.2	0.0	chr2	71551842	71551886	(170641643)	+	MIR1_Amn	SINE/MIR	109	155	(75)	2020823
18	9.1	5.3	2.5	chr2	73385805	73385842	(168807687)	+	(CTC)n	Simple_repeat	1	40	(0)	2023643
4873	12.3	2.8	0.1	chr2	74187899	74188644	(168004885)	+	LTR27C	LTR/ERV1	2	767	(0)	2024957
445	8.5	0.0	0.0	chr2	74855380	74855438	(167338091)	C	AluY	SINE/Alu	(12)	289	231	2026096
642	10.8	2.1	0.0	chr2	74855441	74855533	(167337996)	C	AluY	SINE/Alu	(216)	95	1	2026096
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
201	24.7	4.3	11.9	chr2	84925970	84926070	(157267459)	C	MER91C	DNA/hAT-Tip100	(31)	109	17	2039689
193	17.1	0.0	5.4	chr2	85354208	85354244	(156839285)	C	MIR3	SINE/MIR	(59)	149	115	2040584
181	32.4	2.8	4.5	chr2	85354217	85354326	(156839203)	C	MIR1_Amn	SINE/MIR	(83)	147	40	2040585
13	25.6	1.6	4.8	chr2	85410292	85410352	(156783177)	+	(TCCT)n	Simple_repeat	1	62	(0)	2040701
1867	17.7	0.0	1.3	chr2	85498942	85499257	(156694272)	C	AluJb	SINE/Alu	(0)	312	1	2040908
1874	14.6	8.4	10.2	chr2	85499258	85499398	(156694131)	+	MER57B2	LTR/ERV1	256	396	(7)	2040905
887	18.2	2.8	20.3	chr2	85534157	85534426	(156659103)	C	MER21A	LTR/ERVL	(321)	610	386	2040987
1628	13.0	1.1	5.8	chr2	85534415	85534691	(156658838)	C	MER21A	LTR/ERVL	(667)	264	1	2040987
705	16.1	1.5	9.1	chr2	85619751	85619860	(156573669)	+	AluJr4	SINE/Alu	2	110	(202)	2041151
2311	9.8	0.0	1.0	chr2	85619861	85620157	(156573372)	C	AluSq2	SINE/Alu	(19)	294	1	2041152
2482	6.0	0.0	0.7	chr2	86335570	86335869	(155857660)	+	AluSg	SINE/Alu	2	299	(11)	2042488
18	16.2	0.0	11.5	chr2	86441524	86441601	(155751928)	+	(GGCCGG)n	Simple_repeat	1	78	(0)	2042677
275	37.5	3.0	0.8	chr2	95277717	95277845	(146915684)	C	MIR	SINE/MIR	(20)	242	111	2050442
16	21.0	1.7	4.9	chr2	95317052	95317111	(146876418)	+	(AGAGGAC)n	Simple_repeat	1	61	(0)	2050499
211	29.4	23.1	2.8	chr2	95330802	95331085	(146862444)	C	L2a	LINE/L2	(40)	3386	3028	2050520
941	28.0	9.1	2.8	chr2	95331140	95331528	(146862001)	C	L2a	LINE/L2	(706)	2713	2298	2050520
19	20.4	0.0	3.7	chr2	95345722	95345775	(146847754)	+	G-rich	Low_complexity	1	54	(0)	2050548
14	17.6	0.0	0.0	chr2	95346429	95346460	(146847069)	+	G-rich	Low_complexity	1	32	(0)	2050550
242	34.6	7.1	2.5	chr2	96092301	96092460	(146101069)	C	MIRb	SINE/MIR	(45)	223	56	2051547
261	32.5	6.4	7.6	chr2	96558620	96558842	(145634687)	C	LTR104_Mam	LTR/Gypsy	(295)	1214	995	2052345
25	28.2	2.0	6.0	chr2	96760837	96760984	(145432545)	+	G-rich	Low_complexity	1	151	(0)	2052732
2259	8.6	2.3	0.0	chr2	96877403	96877694	(145315835)	C	AluSx3	SINE/Alu	(12)	299	1	2052944
18	3.7	3.6	0.0	chr2	96907533	96907560	(145285969)	+	(CCAGG)n	Simple_repeat	1	29	(0)	2052987
15	10.0	0.0	0.0	chr2	105143794	105143815	(137049714)	+	(AC)n	Simple_repeat	1	22	(0)	2064465
14	12.5	0.0	3.5	chr2	105143815	105143855	(137049674)	+	(CCT)n	Simple_repeat	1	39	(0)	2064466
406	28.6	13.2	5.8	chr2	105176424	105176801	(137016728)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	2	2064516
5010	18.8	4.3	0.2	chr2	108316549	108317524	(133876005)	+	L1PBa	LINE/L1	627	1644	(5219)	2069076
265	29.2	6.6	5.8	chr2	108448919	108449038	(133744491)	C	MIRc	SINE/MIR	(123)	145	25	2069252
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
643	28.7	15.2	1.6	chr2	108968820	108969122	(133224407)	+	LTR37B	LTR/ERV1	114	457	(11)	2070060
1850	11.1	10.0	0.0	chr2	109606673	109606950	(132586579)	C	AluSx	SINE/Alu	(0)	312	2	2070944
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
334	17.9	3.6	0.9	chr2	109614414	109614520	(132579009)	+	MER52D	LTR/ERV1	373	482	(1641)	2070959
570	28.6	11.7	2.4	chr2	112624690	112624897	(129568632)	+	L2a	LINE/L2	3194	3423	(3)	2075440
17	8.5	2.3	6.8	chr2	119431777	119431819	(122761710)	+	(CGCCC)n	Simple_repeat	1	44	(0)	2085325
290	32.5	11.0	4.8	chr2	120527987	120528556	(121664973)	C	L2a	LINE/L2	(21)	3405	2751	2087123
41	2.6	0.0	0.0	chr2	120768800	120768839	(121424690)	+	(TG)n	Simple_repeat	1	40	(0)	2087533
284	32.4	4.7	4.7	chr2	120793848	120793996	(121399533)	+	MIRc	SINE/MIR	45	193	(75)	2087570
1803	15.4	0.3	0.7	chr2	120886233	120886566	(121306963)	C	AluJr	SINE/Alu	(0)	312	1	2087708
640	25.8	2.2	4.0	chr2	120911180	120911367	(121282162)	+	MIR	SINE/MIR	33	216	(46)	2087741
596	26.2	12.6	3.7	chr2	121076983	121077358	(121116171)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	9	2088004
201	34.3	4.2	4.2	chr2	127397457	127397599	(114795930)	C	MIRb	SINE/MIR	(111)	157	15	2097376
43	25.2	5.0	3.3	chr2	127407870	127408069	(114785460)	+	(CCTCCT)n	Simple_repeat	1	210	(0)	2097395
13	14.9	3.3	0.0	chr2	127675088	127675117	(114518412)	+	(CCGC)n	Simple_repeat	1	31	(0)	2097794
57	25.5	2.3	5.7	chr2	127675178	127675433	(114518096)	+	G-rich	Low_complexity	1	262	(0)	2097795
217	15.7	17.7	0.0	chr2	128627234	128627284	(113566245)	+	MIR3	SINE/MIR	132	193	(15)	2099494
185	31.8	0.0	3.1	chr2	130182069	130182133	(112011396)	+	L2a	LINE/L2	3358	3420	(6)	2101459
14	29.4	0.0	5.5	chr2	130182271	130182343	(112011186)	+	G-rich	Low_complexity	1	73	(0)	2101460
1793	9.3	0.0	0.0	chr2	130719934	130720158	(111473371)	C	AluSc5	SINE/Alu	(84)	225	1	2102223
334	24.7	1.1	1.1	chr2	131042574	131042667	(111150862)	+	MER5A	DNA/hAT-Charlie	37	130	(59)	2102722
3466	22.9	10.0	6.5	chr2	142868235	142869077	(99324452)	C	LTR27E	LTR/ERV1	(0)	1077	149	2119354
368	25.3	15.0	7.0	chr2	149037162	149037408	(93156121)	C	MamRep4096	DNA/hAT-Tip100	(7)	419	153	2127511
21	9.5	0.0	0.0	chr2	151409773	151409806	(90783723)	+	(GGGAA)n	Simple_repeat	1	34	(0)	2130857
36	22.2	1.2	0.0	chr2	152098738	152098822	(90094707)	+	GA-rich	Low_complexity	1	86	(0)	2131855
26	17.8	0.0	3.3	chr2	152098885	152098945	(90094584)	+	GA-rich	Low_complexity	1	61	(0)	2131855
1281	21.9	7.0	7.0	chr2	152200586	152201041	(89992488)	+	LTR16A1	LTR/ERVL	1	456	(0)	2132031
13	14.7	3.3	0.0	chr2	157628876	157628905	(84564624)	+	G-rich	Low_complexity	1	31	(0)	2138967
21163	15.6	2.5	2.3	chr2	157968436	157972529	(84221000)	C	L1PB1	LINE/L1	(2451)	4411	252	2139522
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
24	6.6	0.0	0.0	chr2	166376221	166376252	(75817277)	+	(GT)n	Simple_repeat	1	32	(0)	2150941
18	18.9	4.2	0.0	chr2	166494277	166494324	(75699205)	+	(TCTCC)n	Simple_repeat	1	50	(0)	2151109
12	24.9	3.6	3.5	chr2	166494325	166494332	(75699197)	+	(TCCCC)n	Simple_repeat	1	58	(0)	2151110
17	11.3	2.4	4.7	chr2	168247729	168247770	(73945759)	+	(CCGCTC)n	Simple_repeat	1	43	(0)	2153276
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
439	23.3	3.0	1.5	chr2	169345498	169345628	(72847901)	+	L1MD2	LINE/L1	6015	6147	(212)	2154810
2273	7.4	3.4	0.0	chr2	169819971	169820255	(72373274)	C	AluSp	SINE/Alu	(18)	295	1	2155667
15	14.9	2.6	2.5	chr2	170714767	170714805	(71478724)	+	(GTGCGG)n	Simple_repeat	1	40	(0)	2157102
17	25.8	0.0	3.4	chr2	172099123	172099181	(70094348)	+	G-rich	Low_complexity	1	59	(0)	2159590
16	23.5	5.5	2.6	chr2	173965785	173965857	(68227672)	+	(GCTGCC)n	Simple_repeat	1	77	(0)	2162466
14	16.2	0.0	0.0	chr2	173965834	173965861	(68227668)	+	(GCT)n	Simple_repeat	1	28	(0)	2162467
479	28.1	15.3	1.8	chr2	174023917	174024253	(68169276)	+	LTR33	LTR/ERVL	112	502	(13)	2162588
46	0.0	0.0	0.0	chr2	176108660	176108698	(66084831)	+	(TG)n	Simple_repeat	1	39	(0)	2165669
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
1835	9.1	0.4	3.6	chr2	178413242	178413494	(63780035)	C	AluSp	SINE/Alu	(67)	246	2	2169048
238	28.4	6.0	8.1	chr2	181876747	181876968	(60316561)	+	L2a	LINE/L2	750	966	(2453)	2173241
830	33.8	20.8	6.9	chr2	182038339	182038825	(60154704)	+	L3	LINE/CR1	3047	3627	(472)	2173442
362	37.6	6.2	3.6	chr2	182038844	182039094	(60154435)	+	L3	LINE/CR1	3841	4098	(1)	2173442
202	23.9	15.4	4.3	chr2	190221438	190221529	(51972000)	C	MIRc	SINE/MIR	(49)	219	116	2184010
4528	17.5	8.2	1.0	chr2	190221533	190222364	(51971165)	+	LTR1D1	LTR/ERV1	1	898	(1)	2184011
339	27.0	13.9	10.2	chr2	191245109	191245343	(50948186)	+	L1M4b	LINE/L1	411	655	(6212)	2185587
6267	8.9	4.3	3.0	chr2	194504342	194505296	(47688233)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2189740
44	26.5	1.6	5.2	chr2	196171682	196171870	(46021659)	+	G-rich	Low_complexity	1	192	(0)	2192007
3241	14.5	1.8	1.4	chr2	200199608	200200382	(41993147)	+	L1PBa	LINE/L1	620	1541	(5321)	2197969
14	19.9	2.4	2.3	chr2	200306622	200306663	(41886866)	+	(GGCG)n	Simple_repeat	1	43	(0)	2198136
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
13	20.5	0.0	4.7	chr2	201451406	201451448	(40742081)	+	(GCAGCC)n	Simple_repeat	1	43	(0)	2200073
31	25.4	4.6	2.2	chr2	203535450	203535580	(38657949)	+	(CCGCCCG)n	Simple_repeat	1	137	(0)	2204170
29	7.8	0.0	0.0	chr2	206443708	206443748	(35749781)	+	(AGCCCCG)n	Simple_repeat	1	41	(0)	2208643
31	12.2	4.5	2.9	chr2	216691768	216691833	(25501696)	+	(TA)n	Simple_repeat	1	69	(0)	2223253
15	19.9	0.0	0.0	chr2	216692009	216692037	(25501492)	+	(CT)n	Simple_repeat	1	29	(0)	2223255
14	15.7	0.0	5.1	chr2	216961236	216961276	(25232253)	+	(TCTTTC)n	Simple_repeat	1	38	(0)	2223716
243	32.4	4.2	3.6	chr2	217827595	217827782	(24365747)	+	MIR3	SINE/MIR	19	201	(7)	2225019
387	32.5	8.9	1.8	chr2	218288888	218289053	(23904476)	C	MIRc	SINE/MIR	(68)	200	22	2225777
218	27.6	14.8	2.0	chr2	218289240	218289339	(23904190)	+	MIR3	SINE/MIR	30	144	(64)	2225778
13	15.9	0.0	0.0	chr2	218292519	218292546	(23900983)	+	G-rich	Low_complexity	1	28	(0)	2225783
13	26.4	4.0	0.0	chr2	218324087	218324136	(23869393)	+	(CCCT)n	Simple_repeat	1	52	(0)	2225873
373	24.6	13.1	0.8	chr2	218398217	218398343	(23795186)	+	MIRb	SINE/MIR	54	198	(70)	2226035
17	26.1	1.6	1.6	chr2	218398557	218398617	(23794912)	+	(CCCCT)n	Simple_repeat	1	62	(0)	2226036
14	23.7	6.8	0.0	chr2	218398637	218398695	(23794834)	+	(GCGCC)n	Simple_repeat	1	63	(0)	2226037
14	7.2	0.0	8.6	chr2	218406515	218406549	(23786980)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2226047
12	20.6	2.4	2.4	chr2	218859460	218859500	(23334029)	+	(TCCTCTC)n	Simple_repeat	1	42	(0)	2226934
13	3.7	10.7	0.0	chr2	218859568	218859595	(23333934)	+	(GAGGC)n	Simple_repeat	1	31	(0)	2226935
20	20.0	3.7	8.1	chr2	218878106	218878212	(23315317)	+	G-rich	Low_complexity	1	111	(0)	2226963
12	22.1	0.0	0.0	chr2	219176901	219176932	(23016597)	+	(TGCC)n	Simple_repeat	1	32	(0)	2227457
14	16.4	2.9	0.0	chr2	219176946	219176979	(23016550)	+	(CGCCCT)n	Simple_repeat	1	35	(0)	2227458
16	9.7	0.0	0.0	chr2	219217921	219217942	(22975587)	+	(A)n	Simple_repeat	1	22	(0)	2227544
12	12.6	2.5	7.3	chr2	219294869	219294908	(22898621)	+	(AGGCCC)n	Simple_repeat	1	41	(0)	2227663
372	28.9	2.4	1.6	chr2	219419758	219419880	(22773649)	C	L2b	LINE/L2	(13)	3362	3239	2227917
12	20.8	0.0	2.9	chr2	219447583	219447617	(22745912)	+	(CCCCT)n	Simple_repeat	1	35	(0)	2227965
994	16.6	1.6	0.6	chr2	224915932	224916113	(17277416)	+	MSTB	LTR/ERVL-MaLR	1	184	(242)	2236754
1168	10.3	0.0	0.0	chr2	224916114	224916258	(17277271)	+	AluSz	SINE/Alu	1	145	(167)	2236755
200	25.2	4.7	5.8	chr2	230879418	230879527	(11314002)	C	MIRc	SINE/MIR	(82)	186	75	2245840
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
2141	10.4	1.0	2.9	chr2	231768390	231768696	(10424833)	C	AluSz	SINE/Alu	(11)	301	1	2247590
1782	15.9	1.7	2.3	chr2	231784202	231784503	(10409026)	+	AluJr	SINE/Alu	3	302	(10)	2247624
16	3.5	3.0	5.9	chr2	232406691	232406723	(9786806)	+	(CCCAG)n	Simple_repeat	1	34	(0)	2248632
399	20.1	3.2	1.1	chr2	232551134	232551224	(9642305)	+	MIRb	SINE/MIR	104	202	(66)	2248838
490	23.7	4.9	3.7	chr2	234957588	234957749	(7235780)	+	MER5B	DNA/hAT-Charlie	12	175	(3)	2252835
265	18.6	0.0	0.0	chr2	235026956	235026998	(7166531)	C	5S	rRNA	(78)	43	1	2252930
1107	26.1	4.6	0.8	chr2	236078075	236078478	(6115051)	C	MLT2C1	LTR/ERVL	(37)	427	5	2254476
2218	12.3	0.3	1.0	chr2	237595987	237596296	(4597233)	+	AluJb	SINE/Alu	1	308	(4)	2256572
447	18.5	0.0	0.0	chr2	237596306	237596386	(4597143)	C	MIRb	SINE/MIR	(16)	252	172	2256573
527	27.7	15.1	0.5	chr2	237596389	237596602	(4596927)	+	MER115	DNA/hAT-Tip100	25	275	(418)	2256574
411	21.0	3.2	9.2	chr2	237673887	237674038	(4519491)	C	MIR	SINE/MIR	(21)	247	100	2256700
183	32.4	6.1	4.6	chr2	238151485	238151678	(4041851)	+	MIR3	SINE/MIR	12	208	(0)	2257421
12	31.1	0.0	1.9	chr2	238151748	238151800	(4041729)	+	GA-rich	Low_complexity	1	53	(0)	2257422
960	18.6	10.8	0.5	chr2	238512600	238512799	(3680730)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	2257917
2326	11.0	0.0	0.0	chr2	238512823	238513132	(3680397)	C	AluSq2	SINE/Alu	(2)	311	2	2257918
4696	12.3	1.0	3.4	chr2	238567344	238568157	(3625372)	+	LTR1A2	LTR/ERV1	44	837	(0)	2257972
12	21.8	4.4	2.1	chr2	240233795	240233839	(1959690)	+	(CCTC)n	Simple_repeat	1	47	(0)	2259836
2450	16.6	4.0	0.5	chr2	240426728	240427138	(1766391)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2260042
770	25.8	1.7	2.1	chr2	240427139	240427176	(1766353)	+	LTR54	LTR/ERV1	476	510	(0)	2260041
869	26.5	13.6	0.8	chr2	240442332	240442727	(1750802)	C	MLT1C	LTR/ERVL-MaLR	(9)	458	4	2260048
314	14.3	4.1	1.4	chr2	240450066	240450136	(1743393)	+	MER53	DNA/hAT	112	184	(9)	2260057
1312	17.1	2.7	0.0	chr2	240851909	240852160	(1341369)	C	MLT1B	LTR/ERVL-MaLR	(131)	259	1	2260462
243	32.2	3.2	0.0	chr2	240916845	240916934	(1276595)	+	MIR3	SINE/MIR	90	182	(26)	2260513
468	34.2	10.5	2.3	chr2	241041053	241041402	(1152127)	+	Charlie7	DNA/hAT-Charlie	85	476	(2136)	2260619
3341	10.9	6.2	0.2	chr2	241100998	241101494	(1092035)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2260680
547	16.8	6.8	0.3	chr2	241516412	241517740	(675789)	+	(CA)n	Simple_repeat	1	1419	(0)	2261255
480	28.1	15.2	1.4	chr2	241615076	241615353	(578176)	+	L1ME3	LINE/L1	5857	6179	(0)	2261435
1826	16.9	0.0	2.9	chr2	241664247	241664553	(528976)	+	AluJb	SINE/Alu	1	298	(14)	2261515
1383	18.0	8.4	2.5	chr2	241664572	241664682	(528847)	+	AluJr	SINE/Alu	1	136	(176)	2261516
2090	12.8	1.7	0.0	chr2	241664683	241664970	(528559)	+	AluSz	SINE/Alu	1	293	(19)	2261517
17	32.1	1.4	2.7	chr2	241668923	241668995	(524534)	+	(GT)n	Simple_repeat	1	74	(0)	2261522
19	19.0	0.0	6.6	chr2	241701857	241701917	(491612)	+	(GCCCGCC)n	Simple_repeat	1	61	(0)	2261583
13	9.9	2.6	7.7	chr2	241701999	241702036	(491493)	+	(CCGC)n	Simple_repeat	1	39	(0)	2261584
232	33.2	10.2	0.0	chr2	241762798	241763008	(430521)	C	L1MEd	LINE/L1	(6208)	895	661	2261678
2577	22.2	5.0	0.9	chr2	241763153	241763729	(429800)	C	Tigger3c	DNA/TcMar-Tigger	(0)	602	1	2261688
14	18.4	2.7	0.0	chr20	325309	325345	(64118822)	+	(CCGCC)n	Simple_repeat	1	38	(0)	2262663
12	21.8	2.7	0.0	chr20	325406	325442	(64118725)	+	(GCCCGA)n	Simple_repeat	1	38	(0)	2262664
421	30.7	7.8	2.4	chr20	373504	373710	(64070457)	+	MIRb	SINE/MIR	19	237	(31)	2262791
2671	3.0	0.3	0.0	chr20	380405	380708	(64063459)	+	AluY	SINE/Alu	1	305	(6)	2262813
272	30.8	5.7	4.1	chr20	380709	380745	(64063422)	C	MIRb	SINE/MIR	(163)	105	73	2262812
49	5.6	4.0	0.0	chr20	420666	420740	(64023427)	+	(CCCATCC)n	Simple_repeat	1	78	(0)	2262907
12	13.7	0.0	0.0	chr20	420868	420891	(64023276)	+	(CAG)n	Simple_repeat	1	24	(0)	2262908
246	31.1	12.2	1.3	chr20	571649	571801	(63872366)	C	MIR3	SINE/MIR	(36)	172	1	2263215
17	15.3	0.0	2.6	chr20	571877	571914	(63872253)	+	(CCCCG)n	Simple_repeat	1	38	(0)	2263216
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
16	14.2	0.0	0.0	chr20	653539	653569	(63790598)	+	(GCGGGG)n	Simple_repeat	1	31	(0)	2263437
258	28.1	0.0	0.9	chr20	833352	833435	(63610732)	C	MIR3	SINE/MIR	(149)	119	40	2263836
653	16.6	2.5	7.6	chr20	1005777	1005939	(63438228)	C	MLT1J2	LTR/ERVL-MaLR	(276)	168	14	2264224
214	25.6	16.5	0.0	chr20	1005956	1006041	(63438126)	+	L2	LINE/L2	2694	2796	(623)	2264225
16	20.0	0.0	5.9	chr20	1226602	1226652	(63217515)	+	(CCCT)n	Simple_repeat	1	51	(0)	2264648
215	34.4	6.5	4.6	chr20	1326218	1326593	(63117574)	+	L2a	LINE/L2	2449	3121	(266)	2264813
1221	26.1	10.2	4.4	chr20	1870810	1871388	(62572779)	C	L2a	LINE/L2	(1)	3425	2806	2265791
15	0.0	0.0	0.0	chr20	1871504	1871520	(62572647)	+	(CA)n	Simple_repeat	1	17	(0)	2265792
216	29.6	0.0	3.6	chr20	1871525	1871608	(62572559)	+	L2c	LINE/L2	3087	3167	(220)	2265793
288	32.6	8.5	1.5	chr20	1943738	1943893	(62500274)	C	L2b	LINE/L2	(2)	3385	3226	2265956
1008	25.7	6.0	5.2	chr20	1943934	1944315	(62499852)	C	LTR37B	LTR/ERV1	(78)	390	6	2265957
1738	18.7	1.9	1.0	chr20	2260867	2261171	(62182996)	C	AluSz6	SINE/Alu	(4)	308	1	2266608
342	32.3	10.3	1.9	chr20	2261219	2261483	(62182684)	C	L2b	LINE/L2	(10)	3365	3076	2266609
22	15.4	0.0	0.0	chr20	2651988	2652023	(61792144)	+	A-rich	Low_complexity	1	36	(0)	2267365
12	26.7	1.8	3.5	chr20	3173075	3173131	(61271036)	+	(CCACAGG)n	Simple_repeat	1	58	(0)	2268350
3038	19.3	8.9	14.1	chr20	3225214	3225746	(61218421)	+	MER21B	LTR/ERVL	23	483	(385)	2268470
13	16.8	0.0	0.0	chr20	3228336	3228362	(61215805)	+	(CAG)n	Simple_repeat	1	27	(0)	2268474
804	15.0	0.0	3.0	chr20	3242272	3242404	(61201763)	+	FLAM_A	SINE/Alu	2	130	(12)	2268492
2083	12.8	0.4	0.0	chr20	3323275	3323580	(61120587)	C	AluSz6	SINE/Alu	(0)	312	1	2268629
30	22.7	3.2	4.7	chr20	3407640	3407762	(61036405)	+	(GGCGCG)n	Simple_repeat	1	127	(0)	2268792
17	16.0	0.0	0.0	chr20	3470925	3470959	(60973208)	+	(CGCA)n	Simple_repeat	1	35	(0)	2268952
1566	30.1	9.2	2.2	chr20	3652348	3652991	(60791176)	+	MLT1J2-int	LTR/ERVL-MaLR	2	695	(692)	2269255
1044	12.5	0.0	0.0	chr20	3734031	3734174	(60709993)	+	AluJb	SINE/Alu	146	289	(23)	2269399
203	27.7	2.4	4.6	chr20	3807495	3807581	(60636586)	C	MIR3	SINE/MIR	(59)	149	65	2269529
195	29.2	2.0	0.0	chr20	3807728	3807775	(60636392)	C	L2b	LINE/L2	(15)	3360	3312	2269530
254	29.2	4.4	4.3	chr20	3820017	3820109	(60624058)	+	MER5A	DNA/hAT-Charlie	87	173	(5)	2269562
943	15.0	0.0	0.0	chr20	3870518	3870676	(60573491)	+	FLAM_C	SINE/Alu	1	143	(0)	2269681
1085	27.1	6.1	4.9	chr20	4045603	4046052	(60398115)	+	LTR16A1	LTR/ERVL	1	456	(0)	2270018
666	29.9	23.2	0.1	chr20	4134228	4134927	(60309240)	C	L2	LINE/L2	(932)	2487	1578	2270211
918	16.5	6.9	0.0	chr20	4135029	4135204	(60308963)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2270212
15	19.6	3.5	5.0	chr20	4148767	4148824	(60295343)	+	(GCGGA)n	Simple_repeat	1	60	(0)	2270251
282	20.6	1.4	4.2	chr20	8487806	8487876	(55956291)	+	LTR16A1	LTR/ERVL	3	71	(385)	2277340
345	21.8	1.3	0.0	chr20	8487895	8487972	(55956195)	+	LTR16A1	LTR/ERVL	159	237	(219)	2277340
83	2.5	0.0	0.0	chr20	10034876	10034957	(54409210)	+	(GGCGGA)n	Simple_repeat	1	82	(0)	2279873
3763	12.8	4.9	1.0	chr20	10352221	10352804	(54091363)	C	LTR35	LTR/ERV1	(0)	608	1	2280395
1556	16.6	9.9	1.8	chr20	11850369	11850700	(52593467)	+	MLT1A0	LTR/ERVL-MaLR	1	362	(3)	2282610
10793	11.6	2.5	0.4	chr20	14217921	14221043	(50223124)	C	L1PBa1	LINE/L1	(3403)	3459	255	2286109
33	0.0	2.9	0.0	chr20	17504905	17504938	(46939229)	+	(GTTTTT)n	Simple_repeat	1	35	(0)	2290983
239	32.4	11.5	0.0	chr20	18738064	18738171	(45705996)	+	L2a	LINE/L2	3300	3421	(5)	2293161
269	33.1	2.4	0.0	chr20	18738188	18738308	(45705859)	+	MIRb	SINE/MIR	2	125	(143)	2293162
22211	12.6	2.2	2.5	chr20	18770675	18773744	(45670423)	C	L1MA3	LINE/L1	(2148)	5417	2352	2293202
1593	17.8	2.5	2.5	chr20	18773745	18774030	(45670137)	+	AluJb	SINE/Alu	1	286	(26)	2293203
498	30.2	1.7	4.0	chr20	21557202	21557377	(42886790)	C	MIR3	SINE/MIR	(32)	176	5	2297269
1760	17.9	12.7	1.9	chr20	22471305	22471719	(41972448)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	2	2298462
84	15.4	7.6	2.7	chr20	22471862	22472099	(41972068)	+	(CA)n	Simple_repeat	1	256	(0)	2298463
659	23.5	17.3	0.4	chr20	23361191	23361459	(41082708)	C	MER110A	LTR/ERV1	(1)	467	144	2299613
13	3.7	0.0	11.4	chr20	23421480	23421514	(41022653)	+	(CGCAGG)n	Simple_repeat	1	35	(0)	2299690
5338	11.8	4.3	2.6	chr20	23521154	23521465	(40922702)	C	MER4D1	LTR/ERV1	(0)	900	589	2299836
320	31.6	6.8	1.9	chr20	23622837	23622991	(40821176)	+	MLT1J	LTR/ERVL-MaLR	17	179	(333)	2299931
113	31.0	3.1	4.4	chr20	23638051	23638751	(40805416)	+	(CCCTC)n	Simple_repeat	1	723	(0)	2299953
3211	7.1	1.1	12.5	chr20	23659417	23659928	(40784239)	C	MLT2A2	LTR/ERVL	(0)	453	1	2299983
492	25.1	10.0	0.8	chr20	24746199	24746443	(39697724)	+	MER76	LTR/ERVL	1	270	(421)	2301286
506	26.6	4.4	4.1	chr20	25547034	25547281	(38896886)	+	MER21C	LTR/ERVL	1	343	(595)	2302349
1515	20.6	4.8	2.1	chr20	25547287	25547667	(38896500)	+	MER21C	LTR/ERVL	524	915	(23)	2302349
13	15.2	0.0	3.2	chr20	31475208	31475238	(32968929)	+	G-rich	Low_complexity	1	31	(0)	2306044
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
1017	15.0	0.0	4.8	chr20	31524094	31524260	(32919907)	+	AluJo	SINE/Alu	137	295	(17)	2306179
1750	12.3	10.6	2.2	chr20	31545724	31545999	(32898168)	C	AluSz6	SINE/Alu	(9)	303	2	2306232
2251	11.4	0.0	0.0	chr20	31594048	31594345	(32849822)	C	AluSx	SINE/Alu	(14)	298	1	2306357
320	29.0	4.8	0.0	chr20	31824617	31824716	(32619451)	C	L2b	LINE/L2	(8)	3367	3263	2306961
588	28.7	19.2	2.3	chr20	31923752	31924581	(32519586)	+	L2a	LINE/L2	2189	3243	(132)	2307200
285	23.7	10.2	2.6	chr20	32040218	32040334	(32403833)	C	MIR3	SINE/MIR	(80)	128	2	2307496
183	30.6	16.8	2.7	chr20	32537120	32537267	(31906900)	C	MIRb	SINE/MIR	(8)	260	88	2308611
518	32.1	12.4	0.0	chr20	32561649	32561838	(31882329)	+	MIRb	SINE/MIR	5	221	(47)	2308680
15	24.9	2.0	3.9	chr20	33071459	33071509	(31372658)	+	GA-rich	Low_complexity	1	52	(0)	2309875
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
17	18.9	2.5	2.4	chr20	33562324	33562385	(30881782)	+	GA-rich	Low_complexity	1	62	(0)	2311081
21	26.9	2.1	4.1	chr20	33811326	33811395	(30632772)	+	(GCGGAG)n	Simple_repeat	1	69	(0)	2311672
12	19.3	0.0	5.1	chr20	33994316	33994354	(30449813)	+	(CCCGCCC)n	Simple_repeat	1	39	(0)	2312097
14	31.0	0.0	6.0	chr20	33994355	33994367	(30449800)	+	(GCCCCC)n	Simple_repeat	58	84	(0)	2312096
16	24.2	0.0	0.0	chr20	34122514	34122557	(30321610)	+	G-rich	Low_complexity	1	44	(0)	2312363
29	0.0	0.0	0.0	chr20	34709161	34709185	(29734982)	+	(GT)n	Simple_repeat	1	25	(0)	2313685
16	18.8	0.0	4.3	chr20	34709247	34709303	(29734864)	+	(CCCCGC)n	Simple_repeat	1	54	(0)	2313686
636	28.9	5.3	9.9	chr20	34880046	34880261	(29563906)	C	L1ME4c	LINE/L1	(261)	569	355	2314043
1291	15.5	7.3	8.2	chr20	34880262	34880552	(29563615)	+	AluJb	SINE/Alu	1	288	(24)	2314044
15	26.6	0.0	0.0	chr20	35171904	35171948	(29272219)	+	GA-rich	Low_complexity	1	45	(0)	2314694
14	6.0	4.8	9.1	chr20	35171998	35172039	(29272128)	+	(CCT)n	Simple_repeat	1	44	(0)	2314695
2451	6.8	1.0	0.0	chr20	35616634	35616929	(28827238)	C	AluSp	SINE/Alu	(14)	299	1	2315686
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
33	22.6	3.3	0.0	chr20	36093671	36093760	(28350407)	+	(GTGTGT)n	Simple_repeat	1	93	(0)	2316831
655	27.7	8.0	0.0	chr20	36809167	36809361	(27634806)	+	MIRb	SINE/MIR	46	257	(11)	2318494
2251	11.3	0.0	0.3	chr20	37246339	37246639	(27197528)	C	AluSz	SINE/Alu	(12)	300	1	2319565
37	27.5	1.5	2.9	chr20	37396410	37396543	(27047624)	+	(TCCTCCC)n	Simple_repeat	1	136	(0)	2319939
453	31.5	9.4	0.0	chr20	37912036	37912219	(26531948)	C	MIR	SINE/MIR	(44)	218	16	2321038
35	5.0	0.0	0.0	chr20	38893568	38893609	(25550558)	+	(GGGAGGAGGC)n	Simple_repeat	1	42	(0)	2323103
14	21.8	0.0	0.0	chr20	38894261	38894297	(25549870)	+	(CGCCCA)n	Simple_repeat	1	37	(0)	2323104
187	38.6	2.1	9.2	chr20	38894344	38894605	(25549562)	+	L2	LINE/L2	2650	2892	(527)	2323105
185	22.4	16.7	1.2	chr20	40776181	40776266	(23667901)	C	MIRc	SINE/MIR	(160)	108	7	2326411
469	23.4	16.4	0.0	chr20	40776317	40776474	(23667693)	+	MIR	SINE/MIR	68	256	(6)	2326412
342	32.9	9.7	1.2	chr20	41340508	41340667	(23103500)	C	MIRb	SINE/MIR	(68)	200	26	2327404
20	17.8	5.2	4.9	chr20	43666973	43667049	(20777118)	+	(CCGCC)n	Simple_repeat	1	81	(0)	2331695
236	29.6	2.7	0.0	chr20	43750081	43750151	(20694016)	+	MER5A	DNA/hAT-Charlie	43	115	(74)	2331892
12	25.1	4.3	0.0	chr20	43914681	43914727	(20529440)	+	(GGCCCGA)n	Simple_repeat	1	49	(0)	2332248
336	31.4	8.1	9.7	chr20	44714279	44714680	(19729487)	+	L2b	LINE/L2	2951	3345	(30)	2334159
14	13.9	2.2	6.5	chr20	44885524	44885568	(19558599)	+	(CCCTGC)n	Simple_repeat	1	46	(0)	2334594
1058	21.1	1.9	0.0	chr20	45127967	45128175	(19315992)	+	MER20	DNA/hAT-Charlie	7	219	(0)	2335076
363	15.4	1.5	1.5	chr20	45128305	45128370	(19315797)	+	LTR105_Mam	LTR/ERVL	492	557	(43)	2335077
700	16.8	1.3	0.7	chr20	45128375	45128524	(19315643)	C	L1M5	LINE/L1	(2148)	3998	3848	2335078
424	34.4	2.3	4.0	chr20	45283625	45283848	(19160319)	+	MIRc	SINE/MIR	9	228	(40)	2335298
18	12.1	6.4	2.0	chr20	45348465	45348511	(19095656)	+	(CCGGCC)n	Simple_repeat	1	50	(0)	2335450
341	23.2	4.7	0.0	chr20	45348676	45348757	(19095410)	C	MIR3	SINE/MIR	(34)	174	89	2335451
16	16.3	0.0	8.8	chr20	45406547	45406603	(19037564)	+	(CCCGCCT)n	Simple_repeat	1	57	(0)	2335583
440	25.1	4.7	3.0	chr20	45426583	45426750	(19017417)	C	MER5A	DNA/hAT-Charlie	(2)	187	17	2335619
2030	11.5	0.7	0.4	chr20	45813822	45814090	(18630077)	+	AluSz6	SINE/Alu	1	270	(42)	2336267
2418	5.0	1.9	0.0	chr20	45836216	45836517	(18607650)	+	AluY	SINE/Alu	1	308	(3)	2336333
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
13	22.7	7.3	3.4	chr20	46032123	46032204	(18411963)	+	(GCTGCGC)n	Simple_repeat	1	88	(0)	2336823
1832	14.0	1.4	0.4	chr20	46085049	46085326	(18358841)	C	AluJo	SINE/Alu	(31)	281	1	2336892
223	23.3	0.0	6.2	chr20	46085328	46085391	(18358776)	C	L2c	LINE/L2	(91)	3296	3237	2336891
726	30.3	10.1	1.7	chr20	46214391	46214944	(18229223)	+	L2c	LINE/L2	2765	3369	(18)	2337196
18	14.1	0.0	8.9	chr20	46364476	46364531	(18079636)	+	G-rich	Low_complexity	1	56	(0)	2337537
12	20.8	0.0	2.9	chr20	46364531	46364565	(18079602)	+	(GTCTG)n	Simple_repeat	1	35	(0)	2337538
620	31.5	7.7	6.0	chr20	46405041	46405605	(18038562)	C	L2b	LINE/L2	(0)	3375	2812	2337606
2409	6.3	1.3	2.0	chr20	46405606	46405908	(18038259)	+	AluSx1	SINE/Alu	1	301	(11)	2337607
254	29.6	15.6	10.4	chr20	46946829	46946912	(17497255)	C	L3b	LINE/CR1	(202)	5030	4957	2338840
1180	18.9	1.4	0.0	chr20	46946913	46947129	(17497038)	+	MER58A	DNA/hAT-Charlie	4	223	(1)	2338841
601	13.2	0.0	0.0	chr20	47376176	47376266	(17067901)	+	MLT1C	LTR/ERVL-MaLR	86	176	(214)	2339865
1938	13.9	5.1	0.0	chr20	47376271	47376565	(17067602)	+	AluJb	SINE/Alu	1	311	(1)	2339866
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
2045	13.3	0.0	0.0	chr20	47588171	47588434	(16855733)	C	AluSx	SINE/Alu	(48)	264	1	2340479
925	30.8	8.7	7.0	chr20	47588435	47588851	(16855316)	C	L1MC4	LINE/L1	(1619)	6263	5815	2340476
279	20.0	10.7	2.6	chr20	47740683	47740759	(16703408)	+	MER113A	DNA/hAT-Charlie	231	314	(0)	2340753
843	28.0	18.2	0.8	chr20	47740828	47741647	(16702520)	+	L2a	LINE/L2	2414	3426	(0)	2340754
330	24.9	13.7	1.2	chr20	47801986	47802124	(16642043)	C	MIR	SINE/MIR	(64)	166	13	2340869
482	33.7	1.9	6.9	chr20	47809804	47810077	(16634090)	+	LTR16A2	LTR/ERVL	236	495	(0)	2340890
186	20.0	0.0	0.0	chr20	48194150	48194189	(16249978)	C	MIR	SINE/MIR	(191)	71	32	2341628
513	26.9	4.4	0.0	chr20	48359602	48359776	(16084391)	C	MER5A	DNA/hAT-Charlie	(2)	187	5	2341951
560	25.7	13.9	6.3	chr20	48359856	48360168	(16083999)	+	L2b	LINE/L2	2931	3275	(100)	2341952
1154	20.4	3.6	0.5	chr20	48734197	48734413	(15709754)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	2342742
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
22	23.3	1.7	0.0	chr20	49188384	49188443	(15255724)	+	(GCCCCC)n	Simple_repeat	1	61	(0)	2343772
28	14.9	5.5	5.2	chr20	49188641	49188731	(15255436)	+	(CCTT)n	Simple_repeat	1	96	(0)	2343773
11	26.9	4.1	0.0	chr20	49278136	49278158	(15166009)	+	(GGCGGA)n	Simple_repeat	1	50	(0)	2344006
13	13.2	0.0	0.0	chr20	49278159	49278183	(15165984)	+	(GAG)n	Simple_repeat	1	25	(0)	2344007
2199	10.1	0.0	1.3	chr20	49944599	49944904	(14499263)	+	AluSz	SINE/Alu	1	302	(10)	2345682
336	28.1	10.7	1.3	chr20	50015888	50016087	(14428080)	C	MIR	SINE/MIR	(37)	231	13	2345857
806	28.6	10.6	3.0	chr20	50029125	50029681	(14414486)	C	L2a	LINE/L2	(0)	3426	2820	2345900
1659	13.2	2.6	9.8	chr20	50070892	50071218	(14372949)	+	AluJr	SINE/Alu	10	312	(0)	2346021
22	12.6	4.4	0.0	chr20	50166362	50166406	(14277761)	+	(CTTCT)n	Simple_repeat	1	47	(0)	2346248
202	27.8	8.4	1.2	chr20	50187880	50187963	(14256204)	+	MIR3	SINE/MIR	75	167	(101)	2346318
195	26.9	8.8	5.1	chr20	50215902	50215999	(14228168)	+	MIRb	SINE/MIR	51	152	(116)	2346385
180	17.6	0.0	0.0	chr20	50243425	50243458	(14200709)	+	MIR1_Amn	SINE/MIR	119	152	(78)	2346451
395	27.4	10.8	0.0	chr20	50247378	50247501	(14196666)	C	MIR	SINE/MIR	(21)	241	103	2346462
285	23.8	1.6	0.0	chr20	50247661	50247723	(14196444)	+	MIRb	SINE/MIR	113	176	(92)	2346463
14	20.8	1.8	5.4	chr20	50267695	50267749	(14176418)	+	(GGCGG)n	Simple_repeat	1	56	(0)	2346510
1036	8.5	1.5	0.0	chr20	50476131	50476259	(13967908)	+	FLAM_C	SINE/Alu	1	131	(12)	2347045
574	28.6	0.6	5.3	chr20	50478291	50478344	(13965823)	+	MIR	SINE/MIR	15	67	(195)	2347054
5182	10.7	1.1	7.4	chr20	50478345	50478918	(13965249)	C	LTR1	LTR/ERV1	(0)	783	249	2347055
2387	8.4	0.7	0.0	chr20	50660956	50661253	(13782914)	+	AluSx	SINE/Alu	1	300	(12)	2347407
1776	13.7	1.6	8.5	chr20	50661254	50661374	(13782793)	C	AluJb	SINE/Alu	(191)	121	1	2347406
2526	23.2	3.3	3.8	chr20	51759808	51760444	(12683723)	+	Tigger17a	DNA/TcMar-Tigger	1	634	(20)	2349842
237	24.9	13.0	8.5	chr20	52190817	52190992	(12253175)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	2350963
1159	16.7	4.6	0.0	chr20	53124858	53125043	(11319124)	C	MER58A	DNA/hAT-Charlie	(2)	222	28	2352832
427	32.0	1.3	0.7	chr20	53125046	53125193	(11318974)	+	MIRc	SINE/MIR	75	223	(45)	2352833
297	24.6	0.0	1.4	chr20	54172531	54172600	(10271567)	+	MamRep137	DNA/TcMar-Tigger	419	487	(23)	2355205
12	13.2	5.7	2.7	chr20	56358737	56358771	(8085396)	+	G-rich	Low_complexity	1	37	(0)	2358874
24	23.1	0.0	2.9	chr20	56468525	56468593	(7975574)	+	(GCCCC)n	Simple_repeat	1	69	(0)	2359091
288	23.8	4.4	5.8	chr20	56604663	56604800	(7839367)	C	L1MC5a	LINE/L1	(105)	2672	2537	2359412
1764	16.6	4.7	0.3	chr20	56604867	56604983	(7839184)	+	AluJr	SINE/Alu	1	116	(196)	2359413
2167	10.4	6.6	1.4	chr20	56899413	56899773	(7544394)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2360126
13	18.3	5.4	0.0	chr20	56925242	56925278	(7518889)	+	(GCG)n	Simple_repeat	1	39	(0)	2360189
430	30.3	8.0	0.5	chr20	57048352	57048570	(7395597)	C	L2a	LINE/L2	(513)	2906	2670	2360443
153	27.2	1.2	4.3	chr20	57090734	57091313	(7352854)	+	(CCACAC)n	Simple_repeat	1	587	(0)	2360521
491	26.4	2.5	4.9	chr20	57097266	57097407	(7346760)	C	MER45A	DNA/hAT-Tip100	(37)	141	4	2360535
17	4.3	0.0	0.0	chr20	57266660	57266683	(7177484)	+	(GGA)n	Simple_repeat	1	24	(0)	2360863
188	30.0	8.9	2.5	chr20	57266788	57267022	(7177145)	C	L2c	LINE/L2	(10)	3365	3115	2360864
188	32.4	7.5	1.8	chr20	57391043	57391155	(7053012)	+	L2a	LINE/L2	3266	3385	(41)	2361092
12	17.2	4.9	2.3	chr20	57391207	57391247	(7052920)	+	(TCCGCCC)n	Simple_repeat	1	43	(0)	2361093
15	25.6	6.1	2.3	chr20	57391314	57391395	(7052772)	+	G-rich	Low_complexity	1	87	(0)	2361094
1103	24.2	6.2	5.3	chr20	57738290	57738795	(6705372)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	2361693
1110	22.7	0.5	0.0	chr20	57743830	57744049	(6700118)	+	MER58A	DNA/hAT-Charlie	4	224	(0)	2361711
23	17.8	0.0	0.0	chr20	57748876	57748925	(6695242)	+	(TG)n	Simple_repeat	1	50	(0)	2361723
13	18.3	2.6	2.5	chr20	58309638	58309676	(6134491)	+	(GCCCC)n	Simple_repeat	1	40	(0)	2362728
13	18.2	4.6	7.3	chr20	59007332	59007396	(5436771)	+	(CTGCC)n	Simple_repeat	1	68	(0)	2363800
418	27.4	2.8	0.0	chr20	60102862	60102967	(4341200)	C	L2b	LINE/L2	(10)	3365	3257	2365491
1123	21.4	0.0	0.0	chr20	60102968	60103182	(4340985)	+	MER58A	DNA/hAT-Charlie	10	224	(0)	2365492
313	21.3	11.3	1.1	chr20	61769254	61769348	(2674819)	C	MER5A	DNA/hAT-Charlie	(66)	123	18	2367733
291	36.5	3.9	4.3	chr20	61772062	61772300	(2671867)	C	MIRb	SINE/MIR	(34)	234	2	2367739
290	23.3	11.9	5.4	chr20	61772352	61772555	(2671612)	C	L1ME4a	LINE/L1	(652)	5472	5254	2367736
17	12.0	2.6	2.6	chr20	62052491	62052528	(2391639)	+	(CCCAGC)n	Simple_repeat	1	39	(0)	2368050
2152	12.0	0.0	1.6	chr20	62121112	62121428	(2322739)	C	AluSx1	SINE/Alu	(0)	312	1	2368175
17	24.5	1.6	3.2	chr20	62122132	62122192	(2321975)	+	(CCGC)n	Simple_repeat	1	62	(0)	2368176
18	13.3	5.7	3.6	chr20	62361252	62361304	(2082863)	+	G-rich	Low_complexity	1	56	(0)	2368462
341	21.6	7.0	3.3	chr20	62427938	62428053	(2016114)	+	MIR1_Amn	SINE/MIR	61	181	(27)	2368549
189	31.2	7.2	2.3	chr20	62479303	62479433	(1964734)	+	L2c	LINE/L2	3004	3141	(246)	2368615
1775	17.5	5.1	3.0	chr20	62501859	62502223	(1941944)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	2368637
436	27.0	7.9	1.9	chr20	62595524	62595738	(1848429)	C	L1MC4a	LINE/L1	(911)	7131	6903	2368735
202	26.2	4.7	0.0	chr20	62646715	62646775	(1797392)	C	MIR1_Amn	SINE/MIR	(66)	164	101	2368792
19	19.2	0.0	0.0	chr20	62652215	62652250	(1791917)	+	(TG)n	Simple_repeat	1	36	(0)	2368795
193	43.2	0.0	1.0	chr20	62704611	62704706	(1739461)	C	MamRTE1	LINE/RTE-BovB	(3593)	219	125	2368854
953	17.7	3.1	0.0	chr20	62796067	62796286	(1647881)	C	L1MB7	LINE/L1	(776)	5370	5144	2368959
26	30.4	4.2	0.0	chr20	62796373	62796492	(1647675)	+	(CCCGCG)n	Simple_repeat	1	125	(0)	2368962
20	8.2	4.9	2.3	chr20	62816995	62817035	(1627132)	+	(CCGC)n	Simple_repeat	1	43	(0)	2368983
198	13.0	0.6	0.0	chr20	62875203	62875521	(1568646)	+	(CCCCCA)n	Simple_repeat	1	321	(0)	2369062
406	32.0	1.5	0.0	chr20	62875523	62875650	(1568517)	+	ERVL-E-int	LTR/ERVL	1299	1428	(4239)	2369060
12	17.6	5.0	2.4	chr20	62937394	62937433	(1506734)	+	(CCCCG)n	Simple_repeat	1	42	(0)	2369114
225	28.6	9.9	0.0	chr20	62997478	62997568	(1446599)	+	MER46C	DNA/TcMar-Tigger	34	134	(204)	2369171
443	31.3	17.4	0.6	chr20	63014429	63014743	(1429424)	+	L2	LINE/L2	2158	2536	(883)	2369192
188	32.3	9.5	2.4	chr20	63015741	63015867	(1428300)	+	L2	LINE/L2	2520	2656	(763)	2369192
80	0.0	0.0	0.0	chr20	63015968	63016038	(1428129)	+	(CTCCCTGCCT)n	Simple_repeat	1	71	(0)	2369193
656	23.9	6.9	5.7	chr20	63082608	63082908	(1361259)	+	LTR16E1	LTR/ERVL	216	520	(18)	2369253
12	13.0	8.8	0.0	chr20	63179147	63179180	(1264987)	+	(GGC)n	Simple_repeat	1	37	(0)	2369344
43	27.1	2.9	4.7	chr20	63216006	63216212	(1227955)	+	(GGC)n	Simple_repeat	1	213	(0)	2369380
13	19.6	4.0	3.9	chr20	63272867	63272916	(1171251)	+	(GCCCT)n	Simple_repeat	1	52	(0)	2369449
183	15.9	8.3	0.0	chr20	63291209	63291252	(1152915)	C	L2b	LINE/L2	(74)	3301	3254	2369456
32	20.8	1.8	5.4	chr20	63313526	63313635	(1130532)	+	(GTGGT)n	Simple_repeat	1	112	(0)	2369476
31	20.8	0.0	0.0	chr20	63351057	63351124	(1093043)	+	(ACGCCC)n	Simple_repeat	1	68	(0)	2369508
68	13.5	0.0	0.7	chr20	63351127	63351263	(1092904)	+	(CCACGT)n	Simple_repeat	1	137	(0)	2369509
12	15.6	4.2	6.0	chr20	63520747	63520794	(923373)	+	(GCGCGTC)n	Simple_repeat	1	50	(0)	2369661
491	24.2	1.6	3.1	chr20	63552745	63552872	(891295)	+	FLAM_C	SINE/Alu	1	126	(17)	2369700
1248	12.6	0.0	0.0	chr20	63574926	63575100	(869067)	+	AluSx4	SINE/Alu	131	305	(5)	2369713
497	31.4	10.7	5.5	chr20	63619611	63619939	(824228)	+	L1MD2	LINE/L1	24	375	(6172)	2369771
759	19.1	4.4	0.0	chr20	63628567	63628697	(815470)	+	FLAM_C	SINE/Alu	1	137	(6)	2369787
14	12.3	2.6	5.0	chr20	63778460	63778498	(665669)	+	G-rich	Low_complexity	1	40	(0)	2370008
1049	16.4	0.0	0.0	chr20	63827926	63828084	(616083)	C	AluJr	SINE/Alu	(17)	295	137	2370098
14	18.0	2.5	2.4	chr20	63835223	63835262	(608905)	+	(AGGCAG)n	Simple_repeat	1	41	(0)	2370107
29	0.0	0.0	0.0	chr20	63957820	63957847	(486320)	+	(CTCCC)n	Simple_repeat	1	28	(0)	2370300
12	20.6	2.0	5.9	chr20	63974477	63974526	(469641)	+	G-rich	Low_complexity	1	51	(0)	2370316
13	20.1	0.0	2.8	chr20	63978950	63978985	(465182)	+	(TCCG)n	Simple_repeat	1	36	(0)	2370320
1046	29.2	12.0	8.2	chr21	25801280	25802192	(20907791)	+	L1MEi	LINE/L1	106	1057	(1223)	2393047
13	21.5	3.4	8.7	chr21	26170896	26170984	(20538999)	+	(GGCCCAC)n	Simple_repeat	1	92	(0)	2393605
15	29.4	3.2	0.0	chr21	29299273	29299292	(17410691)	+	(CCCG)n	Simple_repeat	1	61	(0)	2398093
11	20.7	5.1	0.0	chr21	29299293	29299331	(17410652)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	2398094
440	30.0	7.0	7.8	chr21	31282598	31282922	(15427061)	C	L4_A_Mam	LINE/RTE-X	(799)	4142	3857	2401043
18	14.7	4.3	2.0	chr21	31344320	31344366	(15365617)	+	(CCTC)n	Simple_repeat	1	49	(0)	2401151
1862	16.8	12.0	1.6	chr21	31524118	31524498	(15185485)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2401532
21	0.0	0.0	0.0	chr21	31599363	31599385	(15110598)	+	(T)n	Simple_repeat	1	23	(0)	2401693
14	15.6	3.4	8.2	chr21	31659922	31659980	(15050003)	+	(GCCCG)n	Simple_repeat	1	61	(0)	2401850
28	20.6	7.3	1.7	chr21	31660030	31660138	(15049845)	+	G-rich	Low_complexity	1	117	(0)	2401851
12	16.6	4.5	4.3	chr21	31872932	31872975	(14837008)	+	(CTCCGCCA)n	Simple_repeat	1	46	(0)	2402248
5409	12.6	1.5	0.4	chr21	32138066	32138855	(14571128)	+	LTR1A1	LTR/ERV1	1	799	(0)	2402731
302	28.4	18.6	4.2	chr21	32138856	32139040	(14570943)	C	L2a	LINE/L2	(724)	2695	2470	2402730
900	14.6	14.8	1.1	chr21	32521719	32521898	(14188085)	C	MER3	DNA/hAT-Charlie	(0)	209	1	2403367
1956	16.6	3.9	4.0	chr21	33089492	33090043	(13619940)	C	MLT2A2	LTR/ERVL	(0)	554	1	2404286
15	19.2	1.9	5.6	chr21	33109839	33109891	(13600092)	+	(CCTCC)n	Simple_repeat	1	54	(0)	2404327
2771	16.8	8.3	4.4	chr21	33286873	33287346	(13422637)	C	MER67B	LTR/ERV1	(129)	532	39	2404659
1916	14.5	0.0	3.7	chr21	33287369	33287665	(13422318)	C	AluJb	SINE/Alu	(25)	287	2	2404661
1871	18.4	7.9	9.4	chr21	33380421	33380603	(13329380)	+	MER34C2	LTR/ERV1	370	551	(4)	2404837
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
309	29.2	7.0	12.9	chr21	33839079	33839503	(12870480)	C	L2a	LINE/L2	(1)	3425	3028	2405693
675	11.4	10.9	0.0	chr21	34511314	34511427	(12198556)	+	MSTD	LTR/ERVL-MaLR	1	128	(268)	2406755
602	23.0	6.8	1.9	chr21	34511427	34511626	(12198357)	+	MSTD	LTR/ERVL-MaLR	233	418	(47)	2406755
329	34.2	9.9	1.6	chr21	34846475	34846671	(11863312)	C	MIR3	SINE/MIR	(1)	207	3	2407247
357	29.5	15.9	5.0	chr21	34858798	34859154	(11850829)	C	Plat_L3	LINE/CR1	(320)	3266	2864	2407273
364	30.9	0.0	3.5	chr21	35511244	35511357	(11198626)	+	MIRb	SINE/MIR	72	181	(87)	2408213
324	20.2	9.9	4.4	chr21	35511532	35511645	(11198338)	C	L1ME4a	LINE/L1	(31)	6093	5973	2408214
1893	23.3	1.3	10.4	chr21	35745760	35746057	(10963926)	C	MER41G	LTR/ERV1	(38)	557	296	2408581
16	22.1	2.1	0.0	chr21	36385368	36385414	(10324569)	+	(GCGCGGC)n	Simple_repeat	1	48	(0)	2409764
57	37.2	1.6	3.3	chr21	36700209	36700591	(10009392)	+	(TTCT)n	Simple_repeat	1	389	(0)	2410358
472	25.0	4.3	2.4	chr21	36860174	36860346	(9849637)	C	MIR	SINE/MIR	(88)	174	4	2410569
713	26.9	8.1	5.1	chr21	36974015	36974393	(9735590)	C	LTR33A_	LTR/ERVL	(108)	423	15	2410770
1984	15.0	1.6	13.2	chr21	36974474	36974911	(9735072)	+	MLT1B	LTR/ERVL-MaLR	5	390	(0)	2410772
13	25.5	3.9	0.0	chr21	36980819	36980869	(9729114)	+	(CAGCCC)n	Simple_repeat	1	53	(0)	2410785
836	27.0	12.3	3.1	chr21	38798222	38798611	(7911372)	C	L2a	LINE/L2	(4)	3422	2992	2413532
436	23.0	3.4	0.0	chr21	38798675	38798787	(7911196)	C	L2a	LINE/L2	(530)	2889	2773	2413532
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
274	17.6	3.7	3.1	chr21	38913709	38914463	(7795520)	+	(CACAACA)n	Simple_repeat	1	783	(0)	2413692
1235	21.0	15.8	3.1	chr21	39104921	39105244	(7604739)	C	MLT1A	LTR/ERVL-MaLR	(1)	373	1	2414014
1691	19.9	1.8	1.5	chr21	39105245	39105393	(7604590)	+	MER58B	DNA/hAT-Charlie	196	341	(0)	2414013
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
821	13.8	0.0	0.0	chr21	39183687	39183802	(7526181)	C	AluJo	SINE/Alu	(196)	116	1	2414126
16	24.6	1.6	3.2	chr21	39312578	39312638	(7397345)	+	(GCCCC)n	Simple_repeat	1	62	(0)	2414330
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
2204	11.8	0.7	2.2	chr21	39377941	39378253	(7331730)	C	AluSx	SINE/Alu	(4)	308	1	2414483
5614	10.0	3.6	1.6	chr21	39638075	39638887	(7071096)	+	LTR1A2	LTR/ERV1	8	837	(0)	2414936
575	30.3	12.8	1.8	chr21	39638957	39639282	(7070701)	C	LTR82A	LTR/ERVL	(2)	870	504	2414937
14745	8.7	0.7	0.4	chr21	39716339	39719141	(6990842)	C	L1PA14	LINE/L1	(0)	6161	3359	2415071
18	4.0	0.0	0.0	chr21	41156394	41156419	(5553564)	+	(CCCAA)n	Simple_repeat	1	26	(0)	2417043
192	30.0	6.2	0.0	chr21	41373337	41373396	(5336587)	+	MIR3	SINE/MIR	58	121	(87)	2417338
14	27.1	4.7	3.4	chr21	41508098	41508182	(5201801)	+	(GCCCTC)n	Simple_repeat	1	89	(0)	2417544
772	18.6	3.1	6.0	chr21	41678981	41679180	(5030803)	+	MLT1H	LTR/ERVL-MaLR	1	194	(355)	2417845
189	28.6	10.6	4.5	chr21	41679215	41679302	(5030681)	C	MIRb	SINE/MIR	(143)	125	32	2417846
15	29.6	0.0	5.2	chr21	41835940	41836016	(4873967)	+	(GCCCCCC)n	Simple_repeat	1	77	(0)	2418051
15	28.3	3.8	2.4	chr21	42234805	42234884	(4475099)	+	(CGCGCG)n	Simple_repeat	1	83	(0)	2418628
15	14.3	0.0	2.9	chr21	42273440	42273473	(4436510)	+	(GCCCC)n	Simple_repeat	1	34	(0)	2418674
1206	25.6	7.6	6.8	chr21	42664891	42665347	(4044636)	+	MLT1C	LTR/ERVL-MaLR	1	461	(6)	2419154
380	23.7	5.3	8.6	chr21	42783103	42783239	(3926744)	C	L1M	LINE/L1	(820)	5422	5280	2419310
693	27.8	9.2	5.8	chr21	42784027	42784489	(3925494)	C	MLT1D	LTR/ERVL-MaLR	(5)	500	21	2419313
177	13.2	0.3	4.8	chr21	42784576	42784928	(3925055)	+	(CCACC)n	Simple_repeat	1	354	(0)	2419314
2092	14.6	0.0	0.0	chr21	42830626	42830926	(3879057)	C	AluSx1	SINE/Alu	(9)	303	3	2419404
196	34.7	11.7	1.1	chr21	42830938	42831112	(3878871)	+	MIRb	SINE/MIR	35	230	(38)	2419405
34842	11.6	3.3	2.9	chr21	42919108	42922458	(3787525)	C	HERVH48-int	LTR/ERV1	(831)	5823	2508	2419570
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
16	24.7	2.8	4.0	chr21	42974392	42974463	(3735520)	+	(CCCGCC)n	Simple_repeat	1	74	(0)	2419663
1614	20.8	7.3	1.4	chr21	43303638	43304062	(3405921)	C	MER66A	LTR/ERV1	(0)	478	27	2420126
276	35.1	10.3	0.8	chr21	43666148	43666394	(3043589)	+	MLT1K	LTR/ERVL-MaLR	190	462	(133)	2420595
2371	16.6	2.6	0.9	chr21	43707578	43707996	(3001987)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2420662
2844	14.7	1.8	13.2	chr21	43712420	43713038	(2996945)	+	LTR35A	LTR/ERV1	1	547	(0)	2420680
2062	11.3	1.7	2.8	chr21	43739418	43739773	(2970210)	C	THE1C	LTR/ERVL-MaLR	(23)	352	1	2420733
17	21.8	8.6	1.1	chr21	43744142	43744239	(2965744)	+	G-rich	Low_complexity	1	105	(0)	2420738
1168	17.9	10.4	0.9	chr21	43775666	43776004	(2933979)	+	MER31A	LTR/ERV1	1	375	(110)	2420778
1944	18.6	7.8	2.6	chr21	43778812	43779275	(2930708)	C	LTR26C	LTR/ERV1	(0)	539	50	2420785
21	5.6	5.4	0.0	chr21	43789349	43789385	(2920598)	+	(CGCAGG)n	Simple_repeat	1	39	(0)	2420812
281	29.4	15.2	1.6	chr21	43814997	43815245	(2894738)	C	L2a	LINE/L2	(184)	3242	2954	2420846
935	20.2	2.8	3.9	chr21	43881957	43882038	(2827945)	+	MER33	DNA/hAT-Charlie	225	302	(22)	2420977
33	18.5	2.3	3.4	chr21	43884217	43884303	(2825680)	+	(CTC)n	Simple_repeat	1	89	(0)	2420982
550	19.8	7.8	2.2	chr21	44021450	44021630	(2688353)	C	L1MC5	LINE/L1	(13)	9291	9100	2421199
890	26.5	6.2	5.0	chr21	44021634	44021951	(2688032)	+	MLT1A	LTR/ERVL-MaLR	1	322	(52)	2421200
2252	10.6	0.0	0.7	chr21	44254825	44255127	(2454856)	C	AluSz	SINE/Alu	(11)	301	1	2421524
2066	9.7	5.1	0.0	chr21	44255239	44255516	(2454467)	+	AluSx1	SINE/Alu	1	293	(19)	2421525
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
216	32.4	5.6	4.7	chr21	44370037	44370143	(2339840)	+	MIR1_Amn	SINE/MIR	43	150	(80)	2421663
959	6.5	2.6	0.1	chr21	44395665	44396966	(2313017)	+	(TGTGGAGGGG)n	Simple_repeat	1	1336	(0)	2421698
2337	9.2	0.3	0.0	chr21	44397043	44397336	(2312647)	C	AluSx3	SINE/Alu	(16)	295	1	2421699
855	20.2	3.7	2.7	chr21	44480519	44480706	(2229277)	+	MER53	DNA/hAT	1	190	(3)	2421804
150	5.1	1.6	0.5	chr21	44484798	44484983	(2225000)	+	(GGGGCGTGA)n	Simple_repeat	1	189	(0)	2421814
2201	18.3	9.8	3.8	chr21	44484984	44485218	(2224765)	C	MER101B	LTR/ERV1	(337)	233	2	2421813
1225	28.6	5.0	0.0	chr21	44761371	44761768	(1948215)	+	L1MEf	LINE/L1	632	1050	(5175)	2422123
22	35.7	0.0	0.0	chr21	44761771	44761865	(1948118)	+	(GTGT)n	Simple_repeat	1	95	(0)	2422125
298	33.5	5.8	1.6	chr21	44765082	44765263	(1944720)	C	MIR	SINE/MIR	(44)	218	29	2422129
11	17.6	5.0	2.4	chr21	44802104	44802143	(1907840)	+	(GGAGGAT)n	Simple_repeat	1	42	(0)	2422173
14	10.8	4.3	8.2	chr21	44810841	44810887	(1899096)	+	GA-rich	Low_complexity	1	49	(0)	2422184
27	21.6	0.0	7.1	chr21	44817809	44817906	(1892077)	+	G-rich	Low_complexity	1	98	(0)	2422189
1133	24.7	8.1	0.0	chr21	44836551	44836902	(1873081)	+	MLT1B	LTR/ERVL-MaLR	1	383	(7)	2422221
270	32.7	6.1	0.4	chr21	44838307	44838555	(1871428)	+	ERVL-E-int	LTR/ERVL	3694	3957	(1710)	2422223
341	21.9	1.0	5.9	chr21	44847734	44847835	(1862148)	+	L1ME4b	LINE/L1	307	403	(489)	2422242
1627	23.1	8.8	6.7	chr21	44897932	44898511	(1811472)	+	MER77	LTR/ERVL	5	597	(7)	2422296
13	15.3	2.5	4.9	chr21	44927688	44927727	(1782256)	+	G-rich	Low_complexity	1	41	(0)	2422330
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
2801	18.3	15.1	3.7	chr21	45102482	45103248	(1606735)	+	L1MC3	LINE/L1	6766	7645	(140)	2422524
3106	16.8	16.3	1.3	chr21	45150605	45151275	(1558708)	C	MER54B	LTR/ERVL	(0)	793	3	2422590
13	7.7	0.0	9.1	chr21	45287900	45287932	(1422051)	+	(GCCCC)n	Simple_repeat	1	33	(0)	2422706
318	31.1	5.6	7.9	chr21	45327196	45327608	(1382375)	C	L2a	LINE/L2	(18)	3408	2954	2422746
92	32.3	0.5	3.6	chr21	45555140	45555555	(1154428)	+	G-rich	Low_complexity	1	418	(0)	2422926
13	16.7	1.2	6.0	chr21	45644262	45644307	(1065676)	+	G-rich	Low_complexity	1	43	(0)	2423035
1391	16.7	15.1	0.0	chr21	45873792	45874049	(835934)	C	AluJb	SINE/Alu	(8)	304	1	2423286
609	5.4	0.0	0.0	chr21	45874054	45874127	(835856)	C	AluJb	SINE/Alu	(238)	74	1	2423287
644	28.8	14.2	0.6	chr21	45874131	45874490	(835493)	C	L1M5	LINE/L1	(1352)	4794	4378	2423284
14	4.0	7.7	0.0	chr21	45893220	45893245	(816738)	+	(AGGG)n	Simple_repeat	1	28	(0)	2423311
793	31.9	9.1	6.2	chr21	45947199	45947407	(762576)	C	Arthur1	DNA/hAT-Tip100	(2887)	1060	855	2423347
231	31.8	2.3	0.0	chr21	45947596	45947680	(762303)	C	Arthur1	DNA/hAT-Tip100	(3366)	581	495	2423347
492	15.6	3.6	13.6	chr21	46005874	46006430	(703553)	C	TAR1	Satellite/telo	(550)	1561	1063	2423403
18	22.5	1.3	6.5	chr21	46097947	46098022	(611961)	+	(CCGCCTC)n	Simple_repeat	1	77	(0)	2423505
13	10.7	6.7	0.0	chr21	46098050	46098079	(611904)	+	(GGCGG)n	Simple_repeat	1	32	(0)	2423506
37	23.7	3.5	3.4	chr21	46324510	46324674	(385309)	+	G-rich	Low_complexity	1	165	(0)	2423812
2151	11.0	1.3	0.7	chr21	46467982	46468281	(241702)	+	AluSz	SINE/Alu	1	302	(10)	2423997
1619	15.3	4.9	5.5	chr21	46468282	46468437	(241546)	+	AluJb	SINE/Alu	138	306	(6)	2423996
236	31.3	5.1	1.5	chr21	46483566	46483698	(226285)	+	MIRb	SINE/MIR	126	263	(5)	2424029
3537	6.9	0.9	0.4	chr21	46510008	46510458	(199525)	C	MLT2A2	LTR/ERVL	(0)	453	1	2424077
22589	12.3	2.2	0.6	chr21	46585548	46587567	(122416)	+	L1PB1	LINE/L1	1098	3260	(3602)	2424159
12	17.7	1.2	13.1	chr21	46635981	46636063	(73920)	+	(CGCCCA)n	Simple_repeat	1	84	(0)	2424209
181	28.8	10.3	0.9	chr22	17917755	17917859	(32900609)	+	L2a	LINE/L2	3103	3218	(208)	2429882
16	9.8	0.0	0.0	chr22	18970117	18970138	(31848330)	+	(G)n	Simple_repeat	1	22	(0)	2431243
39	25.1	3.8	4.7	chr22	18970299	18970483	(31847985)	+	(GCCCGC)n	Simple_repeat	1	192	(0)	2431244
19	18.5	6.3	1.5	chr22	19122417	19122479	(31695989)	+	(GCCGC)n	Simple_repeat	1	67	(0)	2431480
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
5250	11.8	4.4	2.3	chr22	19296357	19297175	(31521293)	C	LTR1A2	LTR/ERV1	(0)	837	1	2431753
2180	9.0	0.0	6.1	chr22	19297182	19297493	(31520975)	+	AluSz	SINE/Alu	1	293	(19)	2431754
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
4132	12.8	5.8	0.4	chr22	19632293	19633000	(31185468)	C	LTR1A2	LTR/ERV1	(1)	836	89	2432348
11	16.2	6.2	7.3	chr22	19852395	19852458	(30966010)	+	(AGAGCTG)n	Simple_repeat	1	68	(0)	2432612
405	15.0	14.2	5.0	chr22	19918608	19918747	(30899721)	C	MER20	DNA/hAT-Charlie	(58)	161	7	2432677
12	20.7	0.0	2.9	chr22	19941852	19941886	(30876582)	+	(GCCGG)n	Simple_repeat	1	35	(0)	2432713
12	24.5	4.9	3.1	chr22	19959502	19959562	(30858906)	+	(AGCGG)n	Simple_repeat	1	64	(0)	2432753
225	28.7	2.8	1.5	chr22	19974414	19974516	(30843952)	C	MIRc	SINE/MIR	(78)	152	53	2432764
241	36.2	6.0	9.9	chr22	20008349	20008590	(30809878)	+	L2a	LINE/L2	3149	3403	(23)	2432787
72	21.0	0.0	1.8	chr22	20150296	20150460	(30668008)	+	G-rich	Low_complexity	1	165	(0)	2432958
1974	17.1	0.3	0.3	chr22	20151192	20151496	(30666972)	C	AluJr	SINE/Alu	(7)	305	1	2432960
4396	10.7	14.0	2.2	chr22	20205678	20206413	(30612055)	C	LTR1A2	LTR/ERV1	(0)	837	1	2433014
12	19.3	4.7	2.2	chr22	20247180	20247222	(30571246)	+	G-rich	Low_complexity	1	45	(0)	2433042
14	16.4	2.9	0.0	chr22	20320135	20320168	(30498300)	+	(CCGCC)n	Simple_repeat	1	35	(0)	2433108
31	15.8	5.4	5.9	chr22	20437757	20437868	(30380600)	+	(GGCGCG)n	Simple_repeat	1	118	(0)	2433316
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
2111	10.9	1.6	0.3	chr22	20503523	20503826	(30314642)	+	AluSz	SINE/Alu	1	308	(4)	2433448
224	31.9	7.5	2.2	chr22	20531403	20531540	(30286928)	C	MIRb	SINE/MIR	(60)	148	3	2433506
12	22.2	7.7	0.0	chr22	20704302	20704353	(30114115)	+	(GCCGCT)n	Simple_repeat	1	56	(0)	2433786
257	23.1	1.3	8.2	chr22	20777757	20777841	(30040627)	+	Tigger15a	DNA/TcMar-Tigger	39	117	(598)	2433915
2492	19.4	9.1	0.9	chr22	20865617	20866162	(29952306)	C	MER77	LTR/ERVL	(4)	600	6	2434091
907	13.4	0.8	0.0	chr22	20873179	20873305	(29945163)	C	AluJr	SINE/Alu	(179)	133	6	2434104
345	25.7	6.0	0.0	chr22	20873322	20873430	(29945038)	C	L1ME3	LINE/L1	(0)	6162	6047	2434105
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
14	17.6	0.0	0.0	chr22	21629314	21629345	(29189123)	+	(GCACGT)n	Simple_repeat	1	32	(0)	2435563
15	29.6	0.0	1.8	chr22	21630062	21630117	(29188351)	+	(GCCCAG)n	Simple_repeat	1	56	(0)	2435564
2072	14.3	0.0	1.0	chr22	21638573	21638706	(29179762)	C	AluSz	SINE/Alu	(180)	132	1	2435578
422	28.2	10.3	4.8	chr22	21638739	21638984	(29179484)	C	MLT1H2	LTR/ERVL-MaLR	(127)	362	95	2435580
28	3.0	2.9	0.0	chr22	23180571	23180604	(27637864)	+	(GGC)n	Simple_repeat	1	35	(0)	2437897
14	8.8	0.0	0.0	chr22	23219069	23219092	(27599376)	+	(ATGG)n	Simple_repeat	1	24	(0)	2437967
12	19.3	4.7	2.2	chr22	23574706	23574748	(27243720)	+	(GCCCAG)n	Simple_repeat	1	45	(0)	2438520
195	32.8	14.1	3.0	chr22	24165980	24166111	(26652357)	C	MIRb	SINE/MIR	(90)	178	30	2439588
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
2027	13.2	2.4	1.4	chr22	24279587	24279875	(26538593)	C	AluSz	SINE/Alu	(18)	294	3	2439783
16	24.5	0.0	0.0	chr22	24329777	24329820	(26488648)	+	(TTCCTT)n	Simple_repeat	1	44	(0)	2439870
2134	9.1	1.8	0.0	chr22	24390853	24391174	(26427294)	C	AluSc8	SINE/Alu	(0)	311	1	2439973
1282	27.1	13.9	2.9	chr22	24392699	24393208	(26425260)	C	MLT1G1	LTR/ERVL-MaLR	(4)	575	1	2439975
2498	7.9	0.0	0.0	chr22	24516720	24517023	(26301445)	C	AluY	SINE/Alu	(7)	304	1	2440174
2245	10.3	0.3	1.0	chr22	24993799	24994100	(25824368)	+	AluSq2	SINE/Alu	2	301	(12)	2441192
465	25.7	13.2	0.9	chr22	24994266	24994484	(25823984)	C	LTR16C	LTR/ERVL	(1)	537	214	2441193
1094	23.7	13.8	4.6	chr22	24996506	24996917	(25821551)	C	LTR16A1	LTR/ERVL	(0)	456	1	2441198
257	32.3	11.3	4.0	chr22	25014006	25014282	(25804186)	+	L1M5	LINE/L1	5588	5887	(237)	2441246
2246	10.8	0.3	0.0	chr22	25026449	25026743	(25791725)	+	AluSp	SINE/Alu	1	296	(17)	2441276
456	30.0	6.2	4.7	chr22	25131767	25131984	(25686484)	+	MIR	SINE/MIR	39	262	(0)	2441558
350	29.3	14.2	1.1	chr22	25166643	25166825	(25651643)	C	MIRb	SINE/MIR	(9)	259	49	2441640
1201	23.6	4.2	13.9	chr22	25321591	25322152	(25496316)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2441989
210	35.8	2.7	1.8	chr22	25380295	25380405	(25438063)	+	L2b	LINE/L2	3245	3356	(19)	2442086
779	12.9	3.0	3.8	chr22	25928288	25928419	(24890049)	+	FLAM_C	SINE/Alu	3	133	(10)	2443179
1943	18.2	0.0	0.3	chr22	26480635	26480942	(24337526)	+	AluJb	SINE/Alu	1	307	(5)	2444420
208	30.4	0.0	0.0	chr22	26493845	26493900	(24324568)	+	MIR	SINE/MIR	6	61	(201)	2444440
12	23.1	5.1	3.2	chr22	26657361	26657419	(24161049)	+	G-rich	Low_complexity	1	62	(0)	2444877
364	28.7	2.5	0.9	chr22	27714010	27714125	(23104343)	+	MIRc	SINE/MIR	117	234	(34)	2447355
706	17.8	11.0	2.0	chr22	27714133	27714281	(23104187)	C	MER58A	DNA/hAT-Charlie	(3)	221	58	2447356
790	22.7	15.3	5.4	chr22	27719592	27719907	(23098561)	C	MLT1H	LTR/ERVL-MaLR	(194)	355	3	2447367
2281	10.3	0.0	0.0	chr22	28704339	28704630	(22113838)	C	AluSz	SINE/Alu	(18)	294	3	2448976
2608	5.2	0.0	1.0	chr22	28707825	28708134	(22110334)	C	AluY	SINE/Alu	(0)	311	5	2448987
963	14.4	1.3	1.3	chr22	28708209	28708361	(22110107)	+	AluJo	SINE/Alu	136	288	(24)	2448988
190	30.4	1.4	2.8	chr22	28900740	28900810	(21917658)	+	L2c	LINE/L2	3253	3322	(65)	2449525
1781	16.3	1.6	2.3	chr22	28900827	28901133	(21917335)	+	AluJr	SINE/Alu	2	306	(6)	2449526
1021	18.8	5.6	0.5	chr22	29000609	29000827	(21817641)	C	MSTB	LTR/ERVL-MaLR	(0)	426	196	2449710
1453	14.8	1.4	1.4	chr22	29000830	29001052	(21817416)	C	AluJr	SINE/Alu	(53)	259	37	2449711
28	17.9	5.5	2.0	chr22	29072948	29073031	(21745437)	+	G-rich	Low_complexity	1	86	(0)	2449835
13	14.0	0.0	5.7	chr22	29306273	29306307	(21512161)	+	(GCCCA)n	Simple_repeat	1	35	(0)	2450301
15	18.3	2.1	4.2	chr22	29307067	29307113	(21511355)	+	(CGGCC)n	Simple_repeat	1	48	(0)	2450303
1952	14.5	0.0	0.0	chr22	29596237	29596532	(21221936)	C	AluSg	SINE/Alu	(14)	296	1	2450954
1355	18.3	2.2	2.6	chr22	29596570	29596842	(21221626)	+	AluJr	SINE/Alu	11	282	(30)	2450955
302	23.6	13.5	1.1	chr22	29748030	29748217	(21070251)	+	L2a	LINE/L2	2950	3164	(262)	2451224
1456	16.9	1.2	1.6	chr22	29951890	29952143	(20866325)	C	AluJb	SINE/Alu	(12)	300	48	2451705
1539	14.8	5.2	10.2	chr22	29954061	29954385	(20864083)	C	AluJo	SINE/Alu	(0)	312	5	2451707
914	18.6	0.0	5.2	chr22	30312376	30312547	(20505921)	+	AluJr	SINE/Alu	137	299	(13)	2452337
528	26.1	8.3	2.5	chr22	30553857	30554060	(20264408)	+	MIRb	SINE/MIR	3	219	(49)	2452893
18	15.8	0.0	0.0	chr22	30554114	30554149	(20264319)	+	(CTCTCT)n	Simple_repeat	1	36	(0)	2452894
497	27.4	8.4	2.1	chr22	30554189	30554378	(20264090)	+	MIRb	SINE/MIR	65	267	(1)	2452895
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
19	16.8	0.0	0.0	chr22	30635690	30635695	(20182773)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2453064
15	17.6	0.0	0.0	chr22	30635696	30635727	(20182741)	+	(GGC)n	Simple_repeat	1	32	(0)	2453065
2034	11.5	4.3	0.0	chr22	30645820	30646107	(20172361)	C	AluJb	SINE/Alu	(11)	301	1	2453089
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
15	17.1	2.4	2.4	chr22	31082762	31082802	(19735666)	+	(GTGG)n	Simple_repeat	1	42	(0)	2453987
248	37.3	1.7	2.5	chr22	31082906	31083026	(19735442)	C	MIRc	SINE/MIR	(142)	126	7	2453988
14	16.4	2.9	0.0	chr22	31212128	31212161	(19606307)	+	(GCCAGA)n	Simple_repeat	1	35	(0)	2454271
13	21.7	3.4	4.9	chr22	31212162	31212220	(19606248)	+	G-rich	Low_complexity	1	61	(0)	2454272
320	23.8	16.9	1.4	chr22	31750361	31750505	(19067963)	+	L2a	LINE/L2	2668	2839	(580)	2455530
194	20.8	10.0	0.0	chr22	32558813	32558884	(18259584)	C	AmnSINE1	SINE/5S-Deu-L2	(382)	193	114	2457207
12	16.3	0.0	7.5	chr22	32801542	32801581	(18016887)	+	(CGCCCC)n	Simple_repeat	1	40	(0)	2457742
15	14.5	3.9	5.7	chr22	32801692	32801742	(18016726)	+	(CAGGCGG)n	Simple_repeat	1	53	(0)	2457743
18	17.7	0.0	0.0	chr22	32801742	32801779	(18016689)	+	(CTC)n	Simple_repeat	1	38	(0)	2457744
3513	8.4	0.4	0.0	chr22	33495924	33496373	(17322095)	C	MLT2A2	LTR/ERVL	(0)	453	2	2459194
1744	18.8	3.8	3.3	chr22	33496374	33496644	(17321824)	+	MLT1A0	LTR/ERVL-MaLR	93	365	(0)	2459193
212	29.3	18.8	0.0	chr22	35351108	35351269	(15467199)	+	MIRb	SINE/MIR	11	200	(68)	2462757
17	15.3	2.7	0.0	chr22	35450406	35450442	(15368026)	+	(CCTTTC)n	Simple_repeat	1	38	(0)	2463025
12	11.3	6.9	0.0	chr22	36028709	36028737	(14789731)	+	(CCCGC)n	Simple_repeat	1	31	(0)	2464175
17	17.9	2.6	0.0	chr22	36028932	36028970	(14789498)	+	G-rich	Low_complexity	1	40	(0)	2464176
2148	8.3	2.6	5.7	chr22	36123560	36123873	(14694595)	C	AluSz	SINE/Alu	(8)	304	1	2464438
2142	6.5	7.8	2.1	chr22	36459125	36459415	(14359053)	C	AluY	SINE/Alu	(1)	310	2	2465103
2078	7.2	3.6	0.0	chr22	36481703	36481993	(14336475)	C	AluSc	SINE/Alu	(0)	309	5	2465157
16	13.2	2.1	6.2	chr22	36482131	36482197	(14336271)	+	(GGCGG)n	Simple_repeat	1	64	(0)	2465158
186	32.7	3.6	9.0	chr22	36578786	36578963	(14239505)	C	L2b	LINE/L2	(1)	3374	3207	2465394
17	22.5	7.5	0.0	chr22	37062398	37062466	(13756002)	+	(CTCTCC)n	Simple_repeat	1	74	(0)	2466431
403	29.5	5.5	0.2	chr22	37069527	37069693	(13748775)	+	MIRb	SINE/MIR	40	231	(37)	2466445
314	30.9	10.9	4.4	chr22	37098973	37099485	(13718983)	C	L2b	LINE/L2	(64)	3311	2770	2466511
381	30.5	8.1	7.4	chr22	37099508	37099751	(13718717)	C	L2a	LINE/L2	(0)	3426	3181	2466512
939	27.5	10.8	3.5	chr22	37138516	37138959	(13679509)	C	L2b	LINE/L2	(2)	3373	2887	2466600
518	22.8	15.2	0.7	chr22	37141925	37142070	(13676398)	C	MIR	SINE/MIR	(90)	172	2	2466609
15	22.2	7.6	1.4	chr22	37188281	37188346	(13630122)	+	GA-rich	Low_complexity	1	71	(0)	2466691
15	20.1	2.5	0.0	chr22	37230255	37230294	(13588174)	+	(GGCGG)n	Simple_repeat	1	41	(0)	2466760
339	30.4	2.0	3.3	chr22	37298833	37298985	(13519483)	C	MIRc	SINE/MIR	(93)	175	25	2466927
630	25.7	11.4	0.5	chr22	37331282	37331492	(13486976)	+	MIRb	SINE/MIR	22	258	(10)	2467004
2361	11.3	0.3	0.0	chr22	37345536	37345845	(13472623)	C	AluSc8	SINE/Alu	(0)	311	1	2467035
468	22.8	3.9	6.1	chr22	37346029	37346159	(13472309)	+	MIRb	SINE/MIR	107	234	(34)	2467036
244	38.8	0.0	1.5	chr22	37508778	37508913	(13309555)	+	MIRc	SINE/MIR	74	207	(61)	2467391
327	26.3	2.1	4.0	chr22	37514782	37514880	(13303588)	C	MIR	SINE/MIR	(24)	238	142	2467405
20	21.3	1.5	4.5	chr22	37560333	37560398	(13258070)	+	G-rich	Low_complexity	1	67	(0)	2467529
2144	10.5	1.0	0.0	chr22	37610344	37610629	(13207839)	C	AluSq2	SINE/Alu	(13)	300	12	2467652
474	6.6	0.0	0.0	chr22	37610632	37610692	(13207776)	C	Alu	SINE/Alu	(250)	61	1	2467653
191	34.2	4.8	0.0	chr22	37638462	37638540	(13179928)	C	L2b	LINE/L2	(37)	3338	3256	2467704
247	29.4	1.4	0.0	chr22	37638745	37638812	(13179656)	C	L2b	LINE/L2	(12)	3363	3295	2467705
13	16.1	0.0	0.0	chr22	37639434	37639461	(13179007)	+	G-rich	Low_complexity	1	28	(0)	2467706
39	0.0	4.7	0.0	chr22	37661332	37661374	(13157094)	+	(GTGTG)n	Simple_repeat	1	45	(0)	2467757
407	32.0	3.8	3.8	chr22	37675741	37675925	(13142543)	+	MIR3	SINE/MIR	16	200	(8)	2467798
233	27.1	4.8	7.9	chr22	37681410	37681566	(13136902)	+	MIR3	SINE/MIR	21	168	(40)	2467818
13	4.3	3.9	3.7	chr22	37696869	37696894	(13121574)	+	(CGCCC)n	Simple_repeat	1	27	(0)	2467851
2505	6.8	0.0	1.6	chr22	37859371	37859681	(12958787)	C	AluY	SINE/Alu	(5)	306	1	2468246
2319	7.9	1.0	3.0	chr22	37859725	37860028	(12958440)	+	AluSx1	SINE/Alu	1	298	(14)	2468247
13	8.5	4.0	0.0	chr22	37905914	37905938	(12912530)	+	(GGC)n	Simple_repeat	1	26	(0)	2468378
354	26.1	14.9	2.1	chr22	37999650	37999841	(12818627)	+	MIRb	SINE/MIR	4	224	(44)	2468587
17	16.9	0.0	4.5	chr22	38112608	38112651	(12705817)	+	(GCCCC)n	Simple_repeat	1	44	(0)	2468819
38	17.0	1.2	1.2	chr22	38120459	38120539	(12697929)	+	(GGCAG)n	Simple_repeat	1	82	(0)	2468835
31	13.3	7.0	4.7	chr22	38120540	38120555	(12697913)	+	(CCAGG)n	Simple_repeat	4	107	(0)	2468836
19	26.7	1.6	3.1	chr22	38202654	38202725	(12615743)	+	(GT)n	Simple_repeat	1	70	(0)	2469024
14	21.3	2.6	0.0	chr22	38272954	38272991	(12545477)	+	(CGC)n	Simple_repeat	1	39	(0)	2469147
15	23.5	1.9	1.9	chr22	38273101	38273152	(12545316)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	2469148
27	27.2	2.0	2.0	chr22	38317381	38317480	(12500988)	+	(CCGC)n	Simple_repeat	1	102	(0)	2469244
28	6.8	0.0	5.8	chr22	38336245	38336296	(12482172)	+	(CCCGC)n	Simple_repeat	1	52	(0)	2469301
252	35.3	1.2	5.0	chr22	38416267	38416423	(12402045)	+	MIR3	SINE/MIR	33	182	(26)	2469440
12	8.0	0.0	9.4	chr22	38441431	38441462	(12377006)	+	G-rich	Low_complexity	1	32	(0)	2469499
249	29.5	0.0	2.5	chr22	38446070	38446149	(12372319)	C	L3	LINE/CR1	(90)	4009	3932	2469511
13	13.1	2.7	5.3	chr22	38456052	38456088	(12362380)	+	G-rich	Low_complexity	1	38	(0)	2469536
2028	15.7	0.0	0.6	chr22	38518520	38518832	(12299636)	C	AluJb	SINE/Alu	(1)	311	1	2469670
1299	20.4	9.5	1.1	chr22	38684804	38685082	(12133386)	C	AluJb	SINE/Alu	(7)	305	1	2470107
524	19.9	14.3	0.6	chr22	38685087	38685243	(12133225)	C	MIR	SINE/MIR	(49)	213	32	2470108
53	8.9	5.6	0.0	chr22	38963919	38964025	(11854443)	+	(AC)n	Simple_repeat	1	113	(0)	2470612
61	5.1	2.3	2.3	chr22	39243211	39243296	(11575172)	+	(TC)n	Simple_repeat	1	88	(0)	2471185
221	26.2	16.5	1.3	chr22	39292404	39292529	(11525939)	C	MIRc	SINE/MIR	(81)	149	4	2471307
235	28.0	7.1	3.3	chr22	39292654	39292775	(11525693)	C	MIRb	SINE/MIR	(87)	181	55	2471309
2380	8.0	0.7	1.9	chr22	39388109	39388280	(11430188)	+	AluSx1	SINE/Alu	137	307	(5)	2471544
185	29.2	3.0	8.4	chr22	39444476	39444617	(11373851)	C	L2b	LINE/L2	(213)	3162	3029	2471663
181	6.1	13.2	0.0	chr22	39454492	39454524	(11363944)	+	MIR	SINE/MIR	78	115	(147)	2471686
16	19.8	4.8	4.5	chr22	39521048	39521110	(11297358)	+	(GGC)n	Simple_repeat	1	66	(0)	2471816
206	30.9	0.0	5.6	chr22	39523596	39523667	(11294801)	C	MIRb	SINE/MIR	(38)	230	163	2471817
2407	3.6	0.0	4.6	chr22	39523687	39523993	(11294475)	C	AluY	SINE/Alu	(18)	293	1	2471818
31	24.2	0.0	6.6	chr22	39598272	39598392	(11220076)	+	(CCGCC)n	Simple_repeat	1	121	(0)	2471985
15	17.5	0.0	0.0	chr22	39988749	39988781	(10829687)	+	(ACCAC)n	Simple_repeat	1	33	(0)	2472659
254	30.9	0.0	4.3	chr22	39999283	39999397	(10819071)	C	MamRTE1	LINE/RTE-BovB	(3583)	229	120	2472689
2212	15.8	0.0	1.3	chr22	40592482	40592792	(10225676)	C	AluJb	SINE/Alu	(5)	307	1	2473874
13	23.6	0.0	0.0	chr22	40636655	40636689	(10181779)	+	(CGC)n	Simple_repeat	1	35	(0)	2473972
185	23.5	3.8	5.6	chr22	41021974	41022027	(9796441)	+	MamRTE1	LINE/RTE-BovB	778	830	(2982)	2474933
12	23.2	5.5	5.2	chr22	41367390	41367462	(9451006)	+	(TGCC)n	Simple_repeat	1	77	(0)	2475750
219	32.2	4.8	2.5	chr22	41544685	41544805	(9273663)	+	L2	LINE/L2	2721	2844	(575)	2476155
251	30.5	5.1	6.4	chr22	41848663	41848802	(8969666)	+	MIR3	SINE/MIR	4	141	(67)	2476915
12	8.1	3.6	3.5	chr22	42317895	42317922	(8500546)	+	(CCTG)n	Simple_repeat	1	29	(0)	2477787
11	12.4	3.6	10.5	chr22	42317935	42317989	(8500479)	+	(CAGGCC)n	Simple_repeat	1	57	(0)	2477788
29	17.0	2.3	5.6	chr22	42369250	42369337	(8449131)	+	G-rich	Low_complexity	1	90	(0)	2477899
780	13.0	0.9	0.0	chr22	42500001	42500115	(8318353)	+	AluSp	SINE/Alu	54	169	(144)	2478221
7155	4.8	1.2	10.0	chr22	42607120	42608264	(8210204)	+	SVA_B	Retroposon/SVA	34	1076	(307)	2478487
16	26.1	0.0	3.5	chr22	42649136	42649193	(8169275)	+	G-rich	Low_complexity	1	58	(0)	2478570
2894	13.7	9.6	11.5	chr22	42670020	42670632	(8147836)	C	LTR8B	LTR/ERV1	(81)	739	134	2478636
2402	8.8	0.3	0.0	chr22	42697969	42698264	(8120204)	+	AluSc	SINE/Alu	1	297	(12)	2478703
18	15.3	4.5	0.0	chr22	42962564	42962607	(7855861)	+	G-rich	Low_complexity	1	46	(0)	2479266
1129	24.2	9.8	1.7	chr22	42965064	42965420	(7853048)	+	L1ME1	LINE/L1	5777	6165	(14)	2479271
12	4.7	0.0	7.7	chr22	43025246	43025271	(7793197)	+	(GCCT)n	Simple_repeat	1	26	(0)	2479399
324	27.9	1.9	0.0	chr22	43045611	43045714	(7772754)	C	MIRc	SINE/MIR	(113)	155	50	2479447
184	32.8	0.0	0.0	chr22	43110225	43110282	(7708186)	+	MIRb	SINE/MIR	121	178	(90)	2479618
12	11.7	10.8	0.0	chr22	43126943	43126979	(7691489)	+	G-rich	Low_complexity	1	41	(0)	2479661
27	2.4	4.3	4.2	chr22	43129229	43129274	(7689194)	+	(TGC)n	Simple_repeat	1	48	(0)	2479662
45	0.0	2.4	0.0	chr22	43164300	43164341	(7654127)	+	(CA)n	Simple_repeat	1	43	(0)	2479749
289	20.9	5.7	1.1	chr22	43205565	43206408	(7612060)	+	(AC)n	Simple_repeat	1	892	(0)	2479824
215	30.4	8.1	1.2	chr22	43213163	43213242	(7605226)	+	L3	LINE/CR1	4014	4099	(0)	2479831
482	31.4	4.1	4.5	chr22	43218830	43219076	(7599392)	+	L2c	LINE/L2	2910	3155	(232)	2479841
1913	17.1	9.0	1.5	chr22	43219077	43219475	(7598993)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2479842
293	36.6	16.6	0.0	chr22	43404663	43404878	(7413590)	C	MIRb	SINE/MIR	(7)	261	3	2480176
842	31.0	11.4	1.8	chr22	43532858	43533301	(7285167)	+	Tigger13a	DNA/TcMar-Tigger	139	630	(141)	2480398
190	39.3	0.0	4.1	chr22	43853889	43854010	(6964458)	C	L2b	LINE/L2	(189)	3186	3070	2480871
3240	9.2	3.3	0.5	chr22	44141227	44141665	(6676803)	C	MLT2A2	LTR/ERVL	(0)	453	2	2481426
310	37.9	4.6	0.0	chr22	44697730	44697874	(6120594)	+	MIRb	SINE/MIR	57	208	(60)	2482460
13	7.3	3.0	5.9	chr22	44710054	44710086	(6108382)	+	(GGAGGT)n	Simple_repeat	1	34	(0)	2482489
28	0.0	0.0	0.0	chr22	44710879	44710905	(6107563)	+	(GCAGG)n	Simple_repeat	1	27	(0)	2482490
297	30.0	1.8	4.3	chr22	44710913	44711027	(6107441)	C	MIR	SINE/MIR	(80)	182	71	2482491
1822	14.2	2.8	0.7	chr22	44715668	44715948	(6102520)	C	AluJo	SINE/Alu	(25)	287	1	2482499
2316	11.5	0.0	0.6	chr22	44782053	44782366	(6036102)	+	AluSz	SINE/Alu	1	312	(0)	2482633
2282	24.4	5.2	2.4	chr22	44782367	44782907	(6035561)	C	L1MB5	LINE/L1	(41)	6133	5566	2482632
283	23.7	2.1	7.0	chr22	45239602	45239701	(5578767)	+	MIRb	SINE/MIR	63	157	(111)	2483502
422	27.4	8.7	5.8	chr22	45317819	45318008	(5500460)	C	MLT1H2	LTR/ERVL-MaLR	(292)	197	2	2483692
17	21.1	4.1	0.0	chr22	45671885	45671933	(5146535)	+	(CGG)n	Simple_repeat	1	51	(0)	2484357
33	19.3	0.0	3.7	chr22	45671955	45672036	(5146432)	+	(CCT)n	Simple_repeat	1	82	(0)	2484358
13	17.6	2.4	4.7	chr22	45913042	45913083	(4905385)	+	(CCCTC)n	Simple_repeat	1	43	(0)	2484730
294	29.3	2.4	0.0	chr22	45934935	45935016	(4883452)	C	MIRb	SINE/MIR	(46)	222	139	2484757
25	20.8	5.1	1.2	chr22	45977219	45977297	(4841171)	+	(CCTC)n	Simple_repeat	1	83	(0)	2484823
12	24.7	0.0	0.0	chr22	45977460	45977494	(4840974)	+	G-rich	Low_complexity	1	35	(0)	2484824
2720	16.1	6.7	3.5	chr22	45987274	45988215	(4830253)	+	MER52A	LTR/ERV1	120	1278	(0)	2484840
26	16.9	0.0	0.0	chr22	46053646	46053698	(4764770)	+	G-rich	Low_complexity	1	53	(0)	2484959
13	21.0	0.0	7.7	chr22	46053863	46053914	(4764554)	+	G-rich	Low_complexity	1	52	(0)	2484960
13	7.1	0.0	10.8	chr22	46071321	46071357	(4747111)	+	(GCCC)n	Simple_repeat	1	37	(0)	2484973
370	32.5	10.5	1.1	chr22	46079617	46079806	(4738662)	C	MIR	SINE/MIR	(18)	244	35	2484977
223	31.7	3.7	0.0	chr22	46122429	46122532	(4695936)	+	MIR1_Amn	SINE/MIR	30	137	(93)	2485022
210	11.4	4.3	0.0	chr22	46150209	46150252	(4668216)	+	MIR1_Amn	SINE/MIR	90	135	(95)	2485070
189	35.2	9.1	4.8	chr22	46295708	46295895	(4522573)	C	L2b	LINE/L2	(24)	3351	3155	2485325
1113	25.1	11.5	2.1	chr22	46441458	46441794	(4376674)	C	MLT1A	LTR/ERVL-MaLR	(1)	373	1	2485524
205	28.6	4.9	7.2	chr22	46484444	46484526	(4333942)	+	MamTip2	DNA/hAT-Tip100	148	228	(77)	2485590
13	17.8	0.0	2.9	chr22	46739205	46739238	(4079230)	+	(CCTCC)n	Simple_repeat	1	34	(0)	2485978
365	31.3	5.1	4.0	chr22	46768620	46768792	(4049676)	+	MamRTE1	LINE/RTE-BovB	3258	3432	(380)	2486039
2385	11.0	0.0	0.0	chr22	46768812	46769120	(4049348)	+	AluSx1	SINE/Alu	1	309	(3)	2486040
700	27.6	5.4	4.5	chr22	46773771	46773955	(4044513)	C	MIR	SINE/MIR	(46)	222	36	2486049
27	25.2	1.3	0.0	chr22	47115001	47115076	(3703392)	+	G-rich	Low_complexity	1	77	(0)	2486449
1558	29.0	7.0	3.2	chr22	47179639	47180044	(3638424)	C	L1ME3A	LINE/L1	(298)	5875	5450	2486499
13	16.8	3.9	5.6	chr22	49647339	49647390	(1171078)	+	(GGAGCTG)n	Simple_repeat	1	54	(0)	2489595
18	13.5	0.0	0.0	chr22	49849562	49849594	(968874)	+	(GAGG)n	Simple_repeat	1	33	(0)	2489837
13	9.4	8.3	2.6	chr22	49936340	49936375	(882093)	+	(CGC)n	Simple_repeat	1	39	(0)	2489985
2350	10.1	0.0	1.3	chr22	50195448	50195763	(622705)	C	AluSx1	SINE/Alu	(0)	312	1	2490319
7724	8.4	1.9	0.1	chr22	50240982	50241969	(576499)	+	LTR13	LTR/ERVK	2	1007	(0)	2490365
13	20.4	3.6	5.2	chr22	50271781	50271836	(546632)	+	(CCGCGG)n	Simple_repeat	1	58	(0)	2490390
16	0.0	0.0	9.4	chr22	50304707	50304738	(513730)	+	(CCCAC)n	Simple_repeat	1	32	(0)	2490420
24	20.2	7.4	2.0	chr22	50314497	50314595	(503873)	+	(AGGCAG)n	Simple_repeat	1	104	(0)	2490428
18	22.0	2.9	4.2	chr22	50436882	50436950	(381518)	+	G-rich	Low_complexity	1	71	(0)	2490684
18	15.8	4.8	0.0	chr22	50583193	50583234	(235234)	+	(CGG)n	Simple_repeat	1	44	(0)	2490907
26	18.0	0.0	4.4	chr22	50612841	50612908	(205560)	+	(GCCCC)n	Simple_repeat	1	68	(0)	2490951
34	7.4	3.4	1.6	chr22	50628181	50628239	(190229)	+	(CGGGGC)n	Simple_repeat	1	61	(0)	2490987
129	22.1	7.1	1.0	chr22	50628611	50629058	(189410)	+	(GT)n	Simple_repeat	1	480	(0)	2490988
1616	18.9	11.0	3.5	chr3	4320355	4320995	(193974564)	C	LTR48	LTR/ERV1	(2)	785	1	2498802
1838	13.4	19.7	0.6	chr3	4568785	4569128	(193726431)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	2499242
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
2050	11.5	2.0	0.3	chr3	5123881	5124168	(193171391)	C	AluSx1	SINE/Alu	(19)	293	1	2500269
435	30.4	4.8	1.8	chr3	8629445	8629639	(189665920)	C	MIR3	SINE/MIR	(6)	202	2	2505702
513	27.8	21.1	3.3	chr3	9061252	9061696	(189233863)	+	L2a	LINE/L2	2832	3388	(38)	2506395
16	27.6	3.0	1.4	chr3	9649441	9649507	(188646052)	+	(GGCGGA)n	Simple_repeat	1	69	(0)	2507672
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
662	23.5	9.7	2.6	chr3	9937269	9937460	(188358099)	C	MIRb	SINE/MIR	(59)	209	3	2508298
730	31.8	6.9	4.6	chr3	10627699	10628371	(187667188)	C	L2b	LINE/L2	(0)	3375	2677	2509796
13	19.6	4.0	3.9	chr3	11719645	11719694	(186575865)	+	(AGGCC)n	Simple_repeat	1	52	(0)	2511933
921	22.8	6.6	5.7	chr3	12677424	12677706	(185617853)	+	MER45C	DNA/hAT-Tip100	1	286	(667)	2513801
1187	24.0	13.4	8.7	chr3	12677839	12678193	(185617366)	+	MER45C	DNA/hAT-Tip100	448	847	(106)	2513802
17	0.0	0.0	0.0	chr3	12694265	12694283	(185601276)	+	(A)n	Simple_repeat	1	19	(0)	2513852
632	25.1	5.9	5.0	chr3	12948033	12948250	(185347309)	+	MIR	SINE/MIR	40	259	(3)	2514350
516	28.1	14.8	1.9	chr3	12952189	12952806	(185342753)	+	L2a	LINE/L2	2373	3125	(301)	2514357
252	27.9	0.0	0.0	chr3	12994636	12994703	(185300856)	C	MIRc	SINE/MIR	(118)	150	83	2514433
326	27.6	1.9	4.5	chr3	13301243	13301352	(184994207)	C	MIR3	SINE/MIR	(61)	147	41	2514999
1393	24.3	1.7	1.9	chr3	13451754	13452164	(184843395)	+	MER66A	LTR/ERV1	29	438	(40)	2515277
897	22.9	6.7	16.5	chr3	13556137	13556554	(184739005)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2515509
307	32.6	8.7	4.2	chr3	13665418	13665625	(184629934)	C	MIRb	SINE/MIR	(7)	261	27	2515709
27201	12.1	2.2	1.1	chr3	13948636	13952946	(184342613)	C	PRIMA41-int	LTR/ERV1	(2036)	5720	1363	2516167
20481	11.2	3.4	1.9	chr3	14012550	14017955	(184277604)	C	L1PB1	LINE/L1	(1143)	5719	258	2516224
1332	16.9	0.4	4.8	chr3	14273812	14274009	(184021550)	C	AluJb	SINE/Alu	(119)	193	1	2516578
254	20.2	1.8	2.6	chr3	14274021	14274097	(184021462)	+	MIRb	SINE/MIR	189	268	(0)	2516577
220	28.0	15.4	2.9	chr3	14369736	14369871	(183925688)	+	MIRb	SINE/MIR	41	196	(72)	2516791
424	30.5	1.5	0.8	chr3	14372082	14372210	(183923349)	+	MIRb	SINE/MIR	22	151	(117)	2516797
30	17.5	3.0	1.5	chr3	14373882	14373947	(183921612)	+	(TC)n	Simple_repeat	1	68	(0)	2516801
307	26.3	9.5	1.0	chr3	14377658	14377753	(183917806)	+	L2b	LINE/L2	3253	3357	(18)	2516811
1937	21.2	9.9	2.2	chr3	14377815	14378307	(183917252)	+	MLT1F	LTR/ERVL-MaLR	12	546	(2)	2516812
1829	18.7	0.0	1.0	chr3	14436190	14436499	(183859060)	C	AluJr	SINE/Alu	(1)	311	5	2516950
56	0.0	0.0	0.0	chr3	14436532	14436581	(183858978)	+	(T)n	Simple_repeat	1	50	(0)	2516951
219	29.0	2.5	1.0	chr3	14452204	14452299	(183843260)	+	MIRb	SINE/MIR	47	146	(122)	2516986
208	25.3	1.0	9.5	chr3	14452385	14452489	(183843070)	C	MIRc	SINE/MIR	(136)	132	37	2516987
498	31.1	6.9	3.8	chr3	14548655	14548891	(183746668)	C	MIRb	SINE/MIR	(6)	262	18	2517170
470	30.0	16.3	1.6	chr3	14548846	14549153	(183746406)	+	L2b	LINE/L2	3014	3375	(0)	2517171
2298	22.9	3.2	3.7	chr3	14605476	14606046	(183689513)	C	MLT1G	LTR/ERVL-MaLR	(17)	574	7	2517295
25	19.6	2.8	7.3	chr3	14948527	14948633	(183346926)	+	G-rich	Low_complexity	1	110	(0)	2517906
13	11.9	0.0	6.2	chr3	15332634	15332665	(182962894)	+	(CCCGC)n	Simple_repeat	1	32	(0)	2518598
5472	23.5	4.0	3.4	chr3	16559217	16559759	(181735800)	+	L1ME1	LINE/L1	3628	4181	(2138)	2520701
2217	16.1	4.0	3.3	chr3	16559760	16560308	(181735251)	+	MLT2A2	LTR/ERVL	1	554	(0)	2520707
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
414	32.1	3.5	1.4	chr3	23741323	23741464	(174554095)	C	MER96	DNA/hAT-Tip100	(28)	147	3	2530665
18	22.6	8.3	1.1	chr3	23806890	23806973	(174488586)	+	(CCTGC)n	Simple_repeat	1	91	(0)	2530814
41	26.1	6.0	0.6	chr3	25783483	25783650	(172511909)	+	(GGCCGG)n	Simple_repeat	1	177	(0)	2533801
12	26.8	0.0	0.0	chr3	32502546	32502585	(165792974)	+	(CCCGAG)n	Simple_repeat	1	40	(0)	2543989
15	14.8	2.6	2.5	chr3	36380394	36380432	(161915127)	+	(GGCGG)n	Simple_repeat	1	40	(0)	2549821
12	16.9	8.3	1.9	chr3	36380462	36380509	(161915050)	+	G-rich	Low_complexity	1	52	(0)	2549822
14	18.3	5.8	5.5	chr3	37176559	37176627	(161118932)	+	(GGAGGCC)n	Simple_repeat	1	73	(0)	2551103
300	21.6	1.3	0.0	chr3	38157564	38157637	(160137922)	C	L1ME3G	LINE/L1	(415)	509	435	2552599
184	7.2	0.0	3.5	chr3	38165413	38165441	(160130118)	+	L2b	LINE/L2	2962	2989	(386)	2552611
14	5.0	0.0	0.0	chr3	39153565	39153585	(159141974)	+	(CGG)n	Simple_repeat	1	21	(0)	2554043
13	12.1	0.0	3.5	chr3	42150166	42150194	(156145365)	+	G-rich	Low_complexity	1	29	(0)	2558647
458	32.3	12.2	4.4	chr3	42519826	42520665	(155774894)	C	L2b	LINE/L2	(0)	3375	2463	2559239
14	19.1	0.0	2.6	chr3	45388444	45388481	(152907078)	+	(GCCCC)n	Simple_repeat	1	38	(0)	2563751
14	23.0	1.8	5.3	chr3	46979798	46979853	(151315706)	+	(CGG)n	Simple_repeat	1	57	(0)	2566214
14	7.8	0.0	6.5	chr3	46979838	46979868	(151315691)	+	(GCCGG)n	Simple_repeat	1	31	(0)	2566215
51	0.0	0.0	0.0	chr3	47443234	47443277	(150852282)	+	(AC)n	Simple_repeat	1	44	(0)	2567144
32	2.7	0.0	0.0	chr3	47443278	47443315	(150852244)	+	(TC)n	Simple_repeat	1	38	(0)	2567145
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
18	16.2	1.9	5.5	chr3	47476084	47476137	(150819422)	+	(GGCCG)n	Simple_repeat	1	55	(0)	2567227
2413	6.8	0.0	0.0	chr3	48557543	48557836	(149737723)	C	AluSq2	SINE/Alu	(19)	294	1	2569562
22	21.8	1.7	1.6	chr3	49007905	49007964	(149287595)	+	GA-rich	Low_complexity	1	61	(0)	2570463
182	33.8	1.4	4.2	chr3	49132386	49132456	(149163103)	+	MamRTE1	LINE/RTE-BovB	395	463	(3349)	2570696
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
17	6.3	2.7	5.3	chr3	49724202	49724238	(148571321)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	2571830
14	18.9	4.8	0.0	chr3	49903903	49903944	(148391615)	+	(GCCGG)n	Simple_repeat	1	44	(0)	2572174
196	30.0	10.7	0.0	chr3	50161580	50161679	(148133880)	+	L2c	LINE/L2	3030	3141	(246)	2572717
13	0.0	0.0	0.0	chr3	50238164	50238180	(148057379)	+	(GCT)n	Simple_repeat	1	17	(0)	2572808
203	33.7	12.3	5.6	chr3	50424454	50424739	(147870820)	+	L2b	LINE/L2	3067	3374	(1)	2573022
120	14.7	1.9	0.5	chr3	51709651	51709864	(146585695)	+	(CA)n	Simple_repeat	1	218	(0)	2574853
490	33.0	2.0	4.4	chr3	51709896	51709987	(146585572)	+	MIR	SINE/MIR	62	151	(111)	2574854
83	0.0	0.0	0.0	chr3	52045856	52045926	(146249633)	+	(TG)n	Simple_repeat	1	71	(0)	2575375
2392	9.8	0.0	0.3	chr3	52132764	52133069	(146162490)	+	AluSz	SINE/Alu	2	306	(6)	2575467
1954	17.0	4.9	3.0	chr3	52133070	52133411	(146162148)	+	MLT1A1	LTR/ERVL-MaLR	50	408	(0)	2575466
280	8.8	0.0	0.0	chr3	52154795	52154828	(146140731)	+	AluSp	SINE/Alu	232	265	(48)	2575490
266	28.6	0.0	0.0	chr3	52245514	52245583	(146049976)	+	MIRc	SINE/MIR	85	154	(114)	2575638
20	24.0	1.4	4.0	chr3	52518880	52518953	(145776606)	+	(GCCCC)n	Simple_repeat	1	75	(0)	2575986
341	34.3	7.5	4.4	chr3	53996251	53996613	(144298946)	+	LTR88a	LTR/Gypsy?	7	381	(435)	2578372
322	34.1	2.6	3.7	chr3	56102141	56102411	(142193148)	C	MER102a	DNA/hAT-Charlie	(2)	328	61	2581506
517	22.7	6.4	0.8	chr3	57977833	57977965	(140317594)	C	L1ME4b	LINE/L1	(116)	776	636	2585079
299	22.7	16.4	0.0	chr3	57989226	57989322	(140306237)	+	MIR	SINE/MIR	99	214	(48)	2585115
2282	9.5	0.0	0.7	chr3	57989362	57989656	(140305903)	+	AluSp	SINE/Alu	2	294	(19)	2585116
294	31.2	10.5	3.4	chr3	58014355	58014593	(140280966)	C	L3	LINE/CR1	(15)	4084	3827	2585193
867	14.4	2.3	0.6	chr3	58217038	58217205	(140078354)	C	MER96B	DNA/hAT-Tip100	(6)	411	241	2585583
229	29.3	17.6	0.6	chr3	58434127	58434291	(139861268)	C	L3	LINE/CR1	(15)	4084	3886	2586005
16	21.6	1.7	5.0	chr3	69013317	69013375	(129282184)	+	G-rich	Low_complexity	1	60	(0)	2603323
18	4.7	0.0	0.0	chr3	69541418	69541439	(128754120)	+	(GA)n	Simple_repeat	1	22	(0)	2604352
5296	15.6	7.0	13.4	chr3	83403567	83404935	(114890624)	+	MER52C	LTR/ERV1	1	1274	(4)	2624541
12	12.6	0.0	3.6	chr3	105366332	105366359	(92929200)	+	(TCCTT)n	Simple_repeat	1	28	(0)	2648179
4636	13.9	5.1	5.5	chr3	106116863	106117662	(92177897)	C	LTR1A1	LTR/ERV1	(0)	799	3	2649108
4918	23.9	5.9	4.8	chr3	106117663	106117843	(92177716)	C	L1MDa	LINE/L1	(4880)	1753	1600	2649106
464	27.8	11.8	1.6	chr3	123067783	123067965	(75227594)	+	MIRc	SINE/MIR	54	257	(11)	2673094
16	36.2	0.0	1.3	chr3	123584947	123585025	(74710534)	+	(GCC)n	Simple_repeat	1	79	(0)	2673960
16	14.6	0.0	6.8	chr3	123961449	123961492	(74334067)	+	G-rich	Low_complexity	1	44	(0)	2674568
272	33.0	5.0	0.0	chr3	124793549	124793642	(73501917)	C	MIRb	SINE/MIR	(1)	267	169	2675866
11	24.6	0.0	2.5	chr3	125056202	125056241	(73239318)	+	G-rich	Low_complexity	1	40	(0)	2676358
16	22.1	2.6	6.3	chr3	126083943	126084019	(72211540)	+	(CGCCCGG)n	Simple_repeat	1	79	(0)	2678108
259	5.1	7.1	0.0	chr3	126782862	126782900	(71512659)	C	MLT1K	LTR/ERVL-MaLR	(533)	62	21	2679088
228	27.3	4.9	0.0	chr3	126961279	126961355	(71334204)	+	LTR90A	LTR	15	95	(881)	2679328
231	30.1	10.6	8.6	chr3	127138436	127138748	(71156811)	+	L2b	LINE/L2	3031	3350	(25)	2679569
1508	26.3	13.0	7.6	chr3	127285553	127286939	(71008620)	+	HAL1	LINE/L1	638	2110	(397)	2679793
393	23.5	8.4	5.0	chr3	127286977	127287218	(71008341)	+	HAL1	LINE/L1	2195	2445	(62)	2679793
468	25.0	12.3	1.8	chr3	127591295	127591461	(70704098)	C	MIRb	SINE/MIR	(81)	187	1	2680326
279	24.2	1.5	4.5	chr3	127756989	127757100	(70538459)	+	MLT1H	LTR/ERVL-MaLR	67	177	(234)	2680611
446	25.0	3.0	2.3	chr3	127757196	127757326	(70538233)	+	MLT1H	LTR/ERVL-MaLR	405	536	(13)	2680611
14	11.3	3.5	0.0	chr3	128481783	128481811	(69813748)	+	(GGGCG)n	Simple_repeat	1	30	(0)	2681793
2094	8.4	2.1	1.4	chr3	128680350	128680635	(69614924)	C	AluSg	SINE/Alu	(22)	288	1	2682211
2127	21.8	4.7	5.9	chr3	128825110	128825670	(69469889)	C	MLT2B3	LTR/ERVL	(0)	554	1	2682541
18	29.3	1.5	0.0	chr3	128845956	128846021	(69449538)	+	(CCAACAG)n	Simple_repeat	1	67	(0)	2682554
332	31.9	3.4	4.0	chr3	128987190	128987339	(69308220)	+	L1ME4a	LINE/L1	5956	6104	(20)	2682818
1538	11.8	12.6	0.0	chr3	129064627	129064855	(69230704)	C	AluJo	SINE/Alu	(14)	298	37	2682966
801	25.1	12.2	6.2	chr3	129064856	129064957	(69230602)	C	MLT1A0	LTR/ERVL-MaLR	(225)	140	39	2682965
2018	16.7	1.6	1.6	chr3	129065773	129066179	(69229380)	+	MLT2A2	LTR/ERVL	1	403	(151)	2682968
262	32.0	6.1	4.1	chr3	129212117	129212276	(69083283)	+	MIR3	SINE/MIR	26	187	(21)	2683298
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
26	2.8	2.6	2.6	chr3	129607107	129607144	(68688415)	+	(TCTCTGCG)n	Simple_repeat	1	39	(0)	2684063
14	22.4	2.4	0.0	chr3	129607184	129607225	(68688334)	+	(TTCTGC)n	Simple_repeat	1	43	(0)	2684064
185	23.3	0.0	2.3	chr3	129622633	129622676	(68672883)	C	MIR	SINE/MIR	(192)	70	28	2684097
84	11.7	0.0	0.0	chr3	130757879	130758008	(67537551)	+	(CACACA)n	Simple_repeat	1	130	(0)	2685955
14446	12.0	4.4	1.1	chr3	130923884	130926095	(67369464)	C	L1MB1	LINE/L1	(3892)	3051	620	2686183
4463	15.6	0.8	0.1	chr3	131795308	131796024	(66499535)	+	MER72	LTR/ERV1	1	722	(0)	2687456
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
624	27.7	13.1	8.9	chr3	135310278	135310669	(62984890)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	2692685
3198	11.7	2.9	3.8	chr3	138072712	138073260	(60222299)	+	L1PB1	LINE/L1	620	1163	(5700)	2696908
42	4.3	0.0	0.0	chr3	138916148	138916195	(59379364)	+	(CAGCCCA)n	Simple_repeat	1	48	(0)	2698511
1211	29.0	12.9	1.3	chr3	140899218	140899831	(57395728)	C	MER115	DNA/hAT-Tip100	(0)	693	7	2701472
24	15.8	0.0	3.8	chr3	141051386	141051438	(57244121)	+	(GGC)n	Simple_repeat	1	53	(0)	2701695
19	15.0	0.0	0.0	chr3	142724476	142724512	(55571047)	+	G-rich	Low_complexity	1	37	(0)	2704608
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
635	23.6	9.2	1.1	chr3	150725549	150725728	(47569831)	+	LTR86B1	LTR/ERVL	1	196	(297)	2715742
273	26.1	15.7	1.5	chr3	150725766	150725901	(47569658)	+	LTR86B1	LTR/ERVL	335	493	(0)	2715742
21	14.3	0.0	9.2	chr3	150763498	150763563	(47531996)	+	(GGCGG)n	Simple_repeat	1	59	(0)	2715808
13	16.3	5.7	0.0	chr3	152269709	152269743	(46025816)	+	(CTT)n	Simple_repeat	1	37	(0)	2717974
185	27.4	11.4	5.8	chr3	157130496	157130685	(41164874)	+	MIRc	SINE/MIR	20	221	(47)	2725023
22132	11.7	1.8	3.3	chr3	158985604	158992030	(39303529)	C	L1PA7	LINE/L1	(7)	6462	5	2727591
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
18	16.0	0.0	0.0	chr3	170908597	170908631	(27386928)	+	(GCG)n	Simple_repeat	1	35	(0)	2743786
16	14.2	0.0	0.0	chr3	171810484	171810514	(26485045)	+	(GGGA)n	Simple_repeat	1	31	(0)	2745122
811	14.1	0.0	7.5	chr3	172063827	172063987	(26231572)	+	MLT1A0	LTR/ERVL-MaLR	1	149	(216)	2745562
789	20.1	2.7	2.0	chr3	172063997	172064145	(26231414)	+	AluJr	SINE/Alu	137	286	(26)	2745563
1514	22.6	7.9	0.8	chr3	177749320	177749685	(20545874)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	2753734
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
492	31.9	5.5	2.3	chr3	182465699	182465997	(15829562)	C	L1M3d	LINE/L1	(5582)	309	1	2761077
1059	28.4	16.1	3.2	chr3	183698970	183699431	(14596128)	C	L2	LINE/L2	(527)	2892	2343	2763198
777	10.7	3.8	3.0	chr3	183699432	183699562	(14595997)	+	FLAM_C	SINE/Alu	1	132	(11)	2763199
2229	12.5	0.3	0.0	chr3	184408114	184408418	(13887141)	C	AluSz	SINE/Alu	(6)	306	1	2764559
84	38.3	0.7	0.9	chr3	184632359	184632732	(13662827)	+	(AC)n	Simple_repeat	1	373	(0)	2765034
372	30.3	5.3	2.0	chr3	184766690	184766930	(13528629)	+	L2b	LINE/L2	2931	3193	(233)	2765280
216	31.3	1.5	0.0	chr3	185537623	185537696	(12757863)	+	MIR1_Amn	SINE/MIR	40	119	(111)	2766587
21	23.0	3.4	4.4	chr3	185825048	185825135	(12470424)	+	(CCGC)n	Simple_repeat	1	91	(0)	2767149
17	15.6	0.0	0.0	chr3	185825220	185825248	(12470311)	+	(CT)n	Simple_repeat	1	29	(0)	2767150
11	18.4	2.4	4.8	chr3	185825251	185825291	(12470268)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	2767151
2087	14.3	4.8	2.2	chr3	185960875	185961009	(12334550)	+	THE1C	LTR/ERVL-MaLR	1	137	(238)	2767460
5017	14.1	4.7	1.0	chr3	185961010	185961802	(12333757)	C	LTR1B	LTR/ERV1	(0)	824	1	2767461
16	9.4	10.6	1.9	chr3	186783214	186783260	(11512299)	+	(CTCCGG)n	Simple_repeat	1	52	(0)	2768981
16	6.8	6.5	0.0	chr3	187139537	187139578	(11155981)	+	(GGCCCC)n	Simple_repeat	1	44	(0)	2769652
260	20.9	6.4	4.4	chr3	188154567	188154703	(10140856)	C	MIR3	SINE/MIR	(8)	200	60	2771376
197	20.6	17.8	3.0	chr3	192515443	192515542	(5780017)	+	MIR3	SINE/MIR	17	134	(74)	2778042
379	30.3	3.2	4.4	chr3	193843252	193843286	(4452273)	C	MIR3	SINE/MIR	(18)	190	160	2780097
1013	23.2	1.8	1.8	chr3	193843287	193843510	(4452049)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	2780098
14	8.1	0.0	6.7	chr3	194003123	194003152	(4292407)	+	(CTC)n	Simple_repeat	1	30	(0)	2780351
15	7.2	3.2	3.1	chr3	194003708	194003738	(4291821)	+	(CCTGGG)n	Simple_repeat	1	32	(0)	2780352
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
271	26.4	2.7	0.0	chr3	194323031	194323102	(3972457)	+	MIR3	SINE/MIR	61	134	(74)	2780935
372	14.8	0.0	0.0	chr3	194871461	194871521	(3424038)	C	MamRep1879	DNA/hAT-Tip100?	(84)	132	72	2782002
1179	29.0	9.6	3.8	chr3	195251788	195252454	(3043105)	+	L1ME3Cz	LINE/L1	287	996	(1)	2782602
16	18.7	6.1	0.0	chr3	195543395	195543443	(2752116)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2783235
29	7.3	0.0	2.2	chr3	196194000	196194045	(2101514)	+	(AGGGC)n	Simple_repeat	1	46	(0)	2784476
520	16.7	2.6	3.0	chr3	196694444	196695628	(1599931)	+	(CA)n	Simple_repeat	1	1216	(0)	2785568
16	8.8	8.3	0.0	chr3	197029712	197029754	(1265805)	+	G-rich	Low_complexity	1	46	(0)	2786244
700	25.6	12.1	0.0	chr4	702383	702651	(189511904)	C	L1MC5a	LINE/L1	(2232)	545	240	2789435
285	32.4	19.1	0.5	chr4	702790	703006	(189511549)	C	L2	LINE/L2	(626)	2793	2527	2789436
17	27.1	4.1	1.3	chr4	721738	721810	(189492745)	+	G-rich	Low_complexity	1	76	(0)	2789450
13	16.8	0.0	5.4	chr4	998118	998154	(189216401)	+	GA-rich	Low_complexity	1	37	(0)	2789769
18	12.2	2.8	0.0	chr4	1022705	1022740	(189191815)	+	(GCGGAGG)n	Simple_repeat	1	37	(0)	2789789
697	25.1	8.1	4.7	chr4	1057458	1057670	(189156885)	+	MER58A	DNA/hAT-Charlie	1	221	(3)	2789810
219	26.3	14.5	2.5	chr4	1210161	1210359	(189004196)	+	L2	LINE/L2	2460	2686	(733)	2789998
40	22.4	3.2	5.0	chr4	1511995	1512149	(188702406)	+	G-rich	Low_complexity	1	160	(0)	2790270
55	20.5	1.3	4.4	chr4	1568662	1568819	(188645736)	+	(CCCAC)n	Simple_repeat	1	160	(0)	2790309
25	7.3	0.0	6.1	chr4	1793202	1793250	(188421305)	+	(GCGGG)n	Simple_repeat	1	49	(0)	2790607
20	10.4	2.2	4.3	chr4	2536140	2536184	(187678371)	+	G-rich	Low_complexity	1	46	(0)	2791756
17	12.0	2.6	2.6	chr4	2843926	2843963	(187370592)	+	(CGGAGC)n	Simple_repeat	1	39	(0)	2792305
13	12.7	0.0	0.0	chr4	2934848	2934873	(187279682)	+	(GCCAC)n	Simple_repeat	1	26	(0)	2792456
16	14.9	0.0	0.0	chr4	3522806	3522836	(186691719)	+	(CAGAG)n	Simple_repeat	1	31	(0)	2793241
14	23.6	7.3	3.9	chr4	4673268	4673363	(185541192)	+	(CCACGC)n	Simple_repeat	1	103	(0)	2795210
483	24.4	6.4	4.2	chr4	4990876	4991089	(185223466)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2795835
1994	16.6	3.7	2.8	chr4	6192891	6193445	(184021110)	+	MLT2A2	LTR/ERVL	1	554	(0)	2797914
12	17.0	7.5	0.0	chr4	6199943	6199982	(184014573)	+	G-rich	Low_complexity	1	43	(0)	2797927
17	21.0	1.7	4.9	chr4	6563481	6563540	(183651015)	+	G-rich	Low_complexity	1	61	(0)	2798616
15	13.9	0.0	0.0	chr4	6563694	6563717	(183650838)	+	(G)n	Simple_repeat	1	24	(0)	2798617
241	30.0	0.0	1.4	chr4	6747839	6747909	(183466646)	C	MIRc	SINE/MIR	(124)	144	75	2799003
17	20.4	8.5	2.2	chr4	6782459	6782540	(183432015)	+	(CCCGCAG)n	Simple_repeat	1	89	(0)	2799089
1229	22.6	12.6	5.1	chr4	7081769	7082258	(183132297)	+	LTR55	LTR/ERVL?	1	532	(16)	2799563
23	15.1	0.0	8.6	chr4	7103441	7103510	(183111045)	+	(GCCCC)n	Simple_repeat	1	70	(0)	2799603
17	24.9	0.0	6.7	chr4	8205378	8205452	(182009103)	+	(CCAC)n	Simple_repeat	1	75	(0)	2801408
441	34.3	1.7	2.2	chr4	8266349	8266527	(181948028)	+	MIRb	SINE/MIR	3	180	(88)	2801505
12	22.0	4.8	0.0	chr4	8580306	8580347	(181634208)	+	(CCCCCT)n	Simple_repeat	1	44	(0)	2801985
53	34.4	1.3	0.9	chr4	8880935	8881159	(181333396)	+	(AC)n	Simple_repeat	1	228	(0)	2802412
22	19.5	0.0	0.0	chr4	15003113	15003159	(175211396)	+	(CCT)n	Simple_repeat	1	47	(0)	2811955
14	8.1	3.9	0.0	chr4	15003176	15003201	(175211354)	+	(AGC)n	Simple_repeat	1	27	(0)	2811956
2158	21.4	3.1	4.1	chr4	22456217	22456776	(167757779)	+	MLT2B3	LTR/ERVL	1	554	(0)	2823976
31	28.6	1.8	0.9	chr4	26319397	26319507	(163895048)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	2830848
21	23.0	1.4	4.1	chr4	37686406	37686477	(152528078)	+	(CCCCG)n	Simple_repeat	1	73	(0)	2846487
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
2488	16.8	2.1	0.2	chr4	38157293	38157716	(152056839)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2847295
24	11.3	4.8	4.5	chr4	38663970	38664032	(151550523)	+	G-rich	Low_complexity	1	66	(0)	2848197
28	20.2	8.0	1.9	chr4	39182678	39182777	(151031778)	+	GA-rich	Low_complexity	1	108	(0)	2849140
769	22.1	1.9	0.0	chr4	39514984	39515137	(150699418)	C	AluJb	SINE/Alu	(19)	293	137	2849790
833	27.8	0.6	0.1	chr4	39812704	39814885	(150399670)	+	(TGTGTG)n	Simple_repeat	1	2195	(0)	2850541
12	19.9	0.0	0.0	chr4	40056774	40056802	(150157753)	+	(CCCG)n	Simple_repeat	1	29	(0)	2851169
12	19.5	2.9	0.0	chr4	40057268	40057302	(150157253)	+	(AGGCCG)n	Simple_repeat	1	36	(0)	2851170
445	27.6	7.0	0.7	chr4	41884412	41884546	(148330009)	C	Eulor6B	DNA?	(191)	147	4	2854764
195	41.6	0.0	1.3	chr4	42641205	42641282	(147573273)	+	L3b	LINE/CR1	4462	4538	(694)	2855893
401	20.9	14.5	8.1	chr4	42641335	42641498	(147573057)	+	L3b	LINE/CR1	3907	4099	(0)	2855894
21	18.9	2.1	0.0	chr4	52038234	52038281	(138176274)	+	(GCC)n	Simple_repeat	1	49	(0)	2865622
2643	17.2	1.6	0.0	chr4	54155823	54156241	(136058314)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2868829
1095	17.1	1.2	0.6	chr4	57013538	57013701	(133200854)	C	AluJb	SINE/Alu	(10)	302	138	2873822
718	20.0	0.0	4.3	chr4	57013826	57013965	(133200590)	+	FLAM_C	SINE/Alu	1	134	(9)	2873823
298	33.4	1.8	1.8	chr4	73885857	73885991	(116328564)	C	MIRc	SINE/MIR	(115)	153	16	2895470
25	22.1	6.3	4.4	chr4	76949773	76949899	(113264656)	+	(AGCCGG)n	Simple_repeat	1	135	(0)	2900137
1579	18.1	3.1	0.4	chr4	77932963	77933243	(112281312)	C	AluJr4	SINE/Alu	(22)	290	2	2901440
1077	23.8	3.7	3.0	chr4	77933246	77933513	(112281042)	+	L1MD2	LINE/L1	496	765	(5782)	2901437
13	15.9	5.7	0.0	chr4	78059103	78059137	(112155418)	+	(GCG)n	Simple_repeat	1	37	(0)	2901640
28	14.7	6.6	3.7	chr4	80184410	80184485	(110030070)	+	(CT)n	Simple_repeat	1	81	(0)	2904505
300	25.4	13.4	0.7	chr4	82285194	82285336	(107929219)	+	L1MDb	LINE/L1	533	696	(5713)	2907370
949	11.6	2.5	13.3	chr4	83308097	83308125	(106906430)	C	AluJr	SINE/Alu	(15)	297	275	2909266
1948	14.7	0.7	0.0	chr4	83308126	83308391	(106906164)	+	AluSz	SINE/Alu	1	268	(44)	2909267
17	20.9	2.9	5.7	chr4	83334900	83334967	(106879588)	+	(CCTC)n	Simple_repeat	1	70	(0)	2909320
13	9.4	5.3	5.0	chr4	83485208	83485245	(106729310)	+	G-rich	Low_complexity	1	40	(0)	2909614
12	20.8	8.0	0.0	chr4	84582715	84582764	(105631791)	+	(GCCTCC)n	Simple_repeat	1	54	(0)	2911313
15	23.7	9.2	2.5	chr4	88007541	88007649	(102206906)	+	(GGCGGACG)n	Simple_repeat	1	119	(0)	2916370
15	12.0	7.9	2.4	chr4	88007678	88007715	(102206840)	+	(GC)n	Simple_repeat	1	41	(0)	2916371
17	12.7	0.0	0.0	chr4	88593251	88593276	(101621279)	+	(GT)n	Simple_repeat	1	26	(0)	2917431
255	35.1	0.7	0.0	chr4	102761481	102761591	(87452964)	+	MIRb	SINE/MIR	147	262	(0)	2936102
700	27.1	12.7	1.7	chr4	108462983	108463275	(81751280)	C	MER102a	DNA/hAT-Charlie	(0)	330	1	2943491
4766	13.8	1.0	7.3	chr4	108463344	108464196	(81750359)	+	LTR1A1	LTR/ERV1	1	799	(0)	2943492
16	0.0	0.0	0.0	chr4	109560093	109560110	(80654445)	+	(T)n	Simple_repeat	1	18	(0)	2945188
17	21.4	10.2	1.0	chr4	118033558	118033645	(72180910)	+	G-rich	Low_complexity	1	97	(0)	2956363
2444	5.3	0.0	0.7	chr4	118399838	118400141	(71814414)	C	SVA_A	Retroposon/SVA	(0)	1387	1086	2956863
13	19.6	0.0	0.0	chr4	122152490	122152519	(68062036)	+	(GCC)n	Simple_repeat	1	30	(0)	2962145
15	17.7	3.5	6.7	chr4	139177227	139177304	(51037251)	+	(CCT)n	Simple_repeat	1	75	(0)	2984095
12	26.6	4.5	2.9	chr4	148445298	148445363	(41769192)	+	(CCTCG)n	Simple_repeat	1	69	(0)	2997129
17	26.2	0.0	6.5	chr4	149835416	149835492	(40379063)	+	(CCCGC)n	Simple_repeat	1	77	(0)	2998896
11	21.7	0.0	4.9	chr4	150078726	150078766	(40135789)	+	G-rich	Low_complexity	1	41	(0)	2999260
233	35.4	3.2	4.2	chr4	153241401	153241589	(36972966)	C	L2c	LINE/L2	(77)	3310	3124	3004287
43	2.3	0.0	0.0	chr4	153466265	153466308	(36748247)	+	(GCGGG)n	Simple_repeat	1	44	(0)	3004724
1450	28.4	11.9	2.8	chr4	168756521	168757227	(21457328)	C	L2a	LINE/L2	(801)	2618	1839	3025278
9664	4.6	1.2	10.9	chr4	169678415	169679948	(20534607)	C	SVA_B	Retroposon/SVA	(0)	1383	1	3026680
18	8.5	0.0	0.0	chr4	170027221	170027245	(20187310)	+	(T)n	Simple_repeat	1	25	(0)	3027260
16	26.5	0.0	5.7	chr4	183289843	183289912	(6924643)	+	G-rich	Low_complexity	1	70	(0)	3044695
17	20.0	7.0	0.0	chr4	183504710	183504766	(6709789)	+	(CGCAGG)n	Simple_repeat	1	61	(0)	3045073
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
497	28.3	13.7	8.9	chr4	184537191	184537727	(5676828)	+	L1M6	LINE/L1	43	613	(5883)	3046748
15	13.6	0.0	2.9	chr4	184649179	184649212	(5565343)	+	(CCCCGG)n	Simple_repeat	1	34	(0)	3046946
17	29.7	0.0	2.9	chr5	53889	53957	(181484302)	+	G-rich	Low_complexity	1	69	(0)	3055018
13	12.7	2.6	5.1	chr5	321663	321700	(181216559)	+	G-rich	Low_complexity	1	39	(0)	3055309
13	19.6	2.9	0.0	chr5	344255	344289	(181193970)	+	(GGC)n	Simple_repeat	1	36	(0)	3055346
345	27.8	1.8	2.3	chr5	344349	345312	(181192947)	+	(GT)n	Simple_repeat	1	962	(0)	3055347
14	15.3	2.6	2.6	chr5	373229	373266	(181164993)	+	(GCCCTG)n	Simple_repeat	1	39	(0)	3055368
13	28.1	0.0	4.9	chr5	892783	892843	(180645416)	+	(GCCGG)n	Simple_repeat	1	61	(0)	3055779
17	24.0	3.0	2.9	chr5	892898	892964	(180645295)	+	(GGCGGC)n	Simple_repeat	1	69	(0)	3055780
370	29.8	4.7	0.7	chr5	930990	931131	(180607128)	C	MER34	LTR/ERV1	(39)	503	356	3055805
1389	18.9	20.7	0.3	chr5	931136	931511	(180606748)	+	MER101	LTR/ERV1	1	473	(1)	3055806
1798	18.0	0.6	2.1	chr5	1274429	1274768	(180263491)	C	MER1B	DNA/hAT-Charlie	(4)	335	1	3056096
553	32.9	6.0	5.0	chr5	1274769	1275024	(180263235)	+	L1M5	LINE/L1	2995	3265	(2881)	3056095
272	17.5	1.7	0.0	chr5	1316513	1316569	(180221690)	+	MER88	LTR/ERVL	4	61	(403)	3056136
12	11.5	3.3	3.2	chr5	1882648	1882677	(179655582)	+	(GGCG)n	Simple_repeat	1	31	(0)	3056739
16	9.0	0.0	9.3	chr5	5494718	5494760	(176043499)	+	(CGCCCC)n	Simple_repeat	1	43	(0)	3060618
306	17.9	2.5	10.3	chr5	6419069	6419155	(175119104)	+	MER20	DNA/hAT-Charlie	5	84	(135)	3061826
262	17.6	12.4	3.4	chr5	6419150	6419237	(175119022)	+	MER20	DNA/hAT-Charlie	120	216	(3)	3061827
13	13.6	6.8	4.3	chr5	6633477	6633520	(174904739)	+	(GCC)n	Simple_repeat	1	47	(0)	3062115
256	31.3	15.2	3.7	chr5	6704703	6705263	(174832996)	+	L2	LINE/L2	2232	2868	(551)	3062208
40	25.7	2.9	7.5	chr5	10307850	10308095	(171230164)	+	G-rich	Low_complexity	1	253	(0)	3066658
454	21.1	1.0	1.0	chr5	10308833	10308928	(171229331)	C	MLT2F	LTR/ERVL	(567)	96	1	3066662
1172	15.8	13.4	13.2	chr5	10308971	10309295	(171228964)	+	MLT1A0	LTR/ERVL-MaLR	1	329	(36)	3066663
354	26.2	1.3	3.1	chr5	10485104	10485246	(171053013)	C	MLT1O	LTR/ERVL-MaLR	(341)	254	111	3066968
401	23.8	2.6	7.9	chr5	10485745	10485908	(171052351)	C	MER5A1	DNA/hAT-Charlie	(2)	164	10	3066969
497	27.8	4.1	9.2	chr5	10536467	10536672	(171001587)	C	L1ME1	LINE/L1	(12)	6152	5953	3067091
24	16.4	0.0	0.0	chr5	10536790	10536835	(171001424)	+	(T)n	Simple_repeat	1	46	(0)	3067092
17	22.2	2.1	0.0	chr5	10564223	10564269	(170973990)	+	(CCCCG)n	Simple_repeat	1	48	(0)	3067141
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
289	32.5	6.5	6.5	chr5	14033252	14033389	(167504870)	+	L2c	LINE/L2	3070	3207	(180)	3071644
12	26.1	2.2	2.2	chr5	14143247	14143291	(167394968)	+	(CTTTC)n	Simple_repeat	1	46	(0)	3071857
794	29.9	10.9	11.2	chr5	14775574	14776497	(166761762)	C	L2b	LINE/L2	(212)	3163	2225	3072645
22	20.0	3.0	2.9	chr5	16936307	16936373	(164601886)	+	(CCCG)n	Simple_repeat	1	69	(0)	3075812
1349	25.2	12.4	2.8	chr5	17070689	17071198	(164467061)	C	L1ME3D	LINE/L1	(16)	6226	5661	3076144
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
885	20.8	1.7	2.2	chr5	31929345	31929526	(149608733)	C	MER20	DNA/hAT-Charlie	(38)	181	1	3095866
2375	8.8	0.0	0.3	chr5	32171666	32171972	(149366287)	+	AluSz	SINE/Alu	1	306	(6)	3096318
12	34.2	0.0	1.7	chr5	32312855	32312914	(149225345)	+	(GCG)n	Simple_repeat	1	60	(0)	3096591
24	11.2	3.0	7.2	chr5	32444036	32444057	(149094202)	+	G-rich	Low_complexity	1	20	(0)	3096858
27	0.0	0.0	0.0	chr5	32444058	32444083	(149094176)	+	(GGCGG)n	Simple_repeat	1	26	(0)	3096859
24	11.2	3.0	7.2	chr5	32444084	32444127	(149094132)	+	G-rich	Low_complexity	21	64	(0)	3096860
2013	18.0	4.2	3.2	chr5	33209963	33210517	(148327742)	C	MLT2A2	LTR/ERVL	(0)	554	1	3097978
552	20.4	0.0	0.0	chr5	33210518	33210613	(148327646)	+	Tigger1	DNA/TcMar-Tigger	2321	2416	(2)	3097979
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
876	25.3	8.8	5.9	chr5	37272389	37272840	(144265419)	C	LTR40b	LTR/ERVL	(0)	462	1	3104129
980	21.2	4.2	7.9	chr5	37272841	37273040	(144265219)	+	Kanga1a	DNA/TcMar-Tc2	423	633	(121)	3104130
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
206	29.1	8.1	2.5	chr5	38265807	38265887	(143272372)	+	MER5A	DNA/hAT-Charlie	97	182	(7)	3105838
13	14.1	4.7	4.4	chr5	40679740	40679782	(140858477)	+	(CCCAG)n	Simple_repeat	1	45	(0)	3109259
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
20	20.8	3.8	1.8	chr5	50967567	50967619	(130570640)	+	(TC)n	Simple_repeat	1	55	(0)	3117168
14	20.7	2.6	0.0	chr5	52989211	52989249	(128549010)	+	G-rich	Low_complexity	1	40	(0)	3119683
1160	24.7	8.3	5.7	chr5	54526624	54527488	(127010771)	C	L2a	LINE/L2	(5)	3421	2544	3121866
18	22.0	2.9	4.2	chr5	55173295	55173363	(126364896)	+	(CCCCG)n	Simple_repeat	1	71	(0)	3122809
274	26.7	4.7	1.4	chr5	55232733	55232922	(126305337)	C	MIRb	SINE/MIR	(38)	230	33	3122912
228	22.7	1.9	3.0	chr5	55232868	55232985	(126305274)	+	MIRc	SINE/MIR	35	151	(79)	3122913
12	21.8	2.2	4.3	chr5	55233076	55233121	(126305138)	+	GA-rich	Low_complexity	1	47	(0)	3122914
2023	13.2	4.3	0.3	chr5	55517846	55518132	(126020127)	C	AluSg	SINE/Alu	(11)	299	1	3123370
20	15.1	4.7	4.5	chr5	56815266	56815329	(124722930)	+	(CGCCTC)n	Simple_repeat	1	67	(0)	3125609
350	35.8	12.6	3.3	chr5	59358409	59358651	(122179608)	+	MamTip2	DNA/hAT-Tip100	12	280	(25)	3129406
23404	10.3	1.1	0.9	chr5	64934101	64940576	(116597683)	C	L1PA7	LINE/L1	(1)	6468	1	3137127
21	18.5	1.3	7.6	chr5	65722126	65722203	(115816056)	+	G-rich	Low_complexity	1	79	(0)	3138300
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
241	32.9	8.8	0.0	chr5	66407752	66407897	(115130362)	C	MIR3	SINE/MIR	(0)	208	49	3139396
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
808	25.7	4.4	0.8	chr5	72255586	72255828	(109282431)	C	MIR	SINE/MIR	(9)	253	2	3148693
19	21.4	3.7	0.0	chr5	73120484	73120537	(108417722)	+	(CCTGC)n	Simple_repeat	1	56	(0)	3150026
4622	16.4	3.2	3.2	chr5	74477726	74478542	(107059717)	C	LTR1B1	LTR/ERV1	(1)	817	1	3152039
350	24.1	5.9	0.9	chr5	74478543	74478572	(107059687)	+	MIRc	SINE/MIR	188	216	(52)	3152038
29	31.5	0.0	7.3	chr5	77630068	77630145	(103908114)	+	(GGCGG)n	Simple_repeat	1	191	(0)	3156915
27	19.2	4.4	5.9	chr5	77630146	77630258	(103908001)	+	G-rich	Low_complexity	1	118	(0)	3156916
9229	21.4	4.7	4.0	chr5	78182366	78183587	(103354672)	+	L1MD1	LINE/L1	21	1282	(5351)	3157716
1747	18.3	0.6	6.9	chr5	80761055	80761418	(100776841)	C	MER61A	LTR/ERV1	(0)	341	1	3162164
18042	11.9	3.9	1.1	chr5	81269746	81273081	(100265178)	+	L1PB1	LINE/L1	407	3847	(3015)	3162920
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
19	10.1	0.0	0.0	chr5	88142458	88142495	(93395764)	+	(ACAC)n	Simple_repeat	1	38	(0)	3171931
27	0.0	0.0	0.0	chr5	90475487	90475512	(91062747)	+	(TTAT)n	Simple_repeat	1	26	(0)	3174833
2314	9.6	1.6	0.0	chr5	90475710	90476010	(91062249)	C	AluSx1	SINE/Alu	(6)	306	1	3174834
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
12	27.1	0.0	2.2	chr5	90529746	90529791	(91008468)	+	G-rich	Low_complexity	1	46	(0)	3174919
31	3.3	0.0	0.0	chr5	93582772	93582802	(87955457)	+	(GT)n	Simple_repeat	1	31	(0)	3178831
18464	16.6	2.5	0.8	chr5	95147385	95150123	(86388136)	C	L1PA16	LINE/L1	(3693)	2921	1	3180742
774	29.6	10.5	1.3	chr5	95164816	95165127	(86373132)	C	MLT1J2	LTR/ERVL-MaLR	(50)	398	55	3180761
16	19.2	2.0	3.9	chr5	95731312	95731372	(85806887)	+	(GCAGCG)n	Simple_repeat	1	59	(0)	3181581
7764	23.2	3.5	1.1	chr5	100708272	100709863	(80828396)	C	L1P4a	LINE/L1	(4862)	1641	10	3188100
13	20.8	7.8	3.6	chr5	102296361	102296437	(79241822)	+	(AGCCTCC)n	Simple_repeat	1	83	(0)	3189947
2459	14.6	0.9	0.2	chr5	103434116	103434535	(78103724)	+	MER52C	LTR/ERV1	1	423	(855)	3191436
13	15.8	2.6	5.0	chr5	111224184	111224222	(70314037)	+	GA-rich	Low_complexity	1	40	(0)	3201162
24	15.1	0.0	5.3	chr5	111224406	111224462	(70313797)	+	(GGC)n	Simple_repeat	1	57	(0)	3201163
586	23.8	0.8	0.8	chr5	111511552	111511678	(70026581)	C	MIR	SINE/MIR	(107)	155	29	3201526
11	16.7	5.9	0.0	chr5	111512568	111512601	(70025658)	+	(CCCAGCC)n	Simple_repeat	1	36	(0)	3201527
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
12	20.8	0.0	2.9	chr5	115169937	115169971	(66368288)	+	G-rich	Low_complexity	1	35	(0)	3206387
220	21.9	6.4	4.0	chr5	116454653	116454728	(65083531)	C	Penelope1_Vert	LINE/Penelope	(805)	282	205	3208162
8797	17.9	1.1	1.2	chr5	119255193	119256832	(62281427)	+	L1PBa1	LINE/L1	1541	3272	(4883)	3212059
23	32.2	1.0	1.9	chr5	119268626	119268728	(62269531)	+	(CCCGC)n	Simple_repeat	1	104	(0)	3212077
1738	20.8	16.6	1.5	chr5	121108532	121109107	(60429152)	C	MER52C	LTR/ERV1	(282)	996	16	3214299
431	27.2	4.2	1.6	chr5	123085055	123085241	(58453018)	+	L2a	LINE/L2	3109	3300	(126)	3216919
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
1071	28.9	10.0	3.9	chr5	124059015	124059555	(57478704)	C	MLT1K	LTR/ERVL-MaLR	(14)	581	4	3218169
15	18.5	0.0	6.1	chr5	124735404	124735452	(56802807)	+	(GCCCAGG)n	Simple_repeat	1	49	(0)	3219039
18	36.3	2.2	0.0	chr5	124746798	124746887	(56791372)	+	GA-rich	Low_complexity	1	92	(0)	3219047
21	8.8	0.0	2.6	chr5	124746938	124746975	(56791284)	+	(GGGGCGG)n	Simple_repeat	1	38	(0)	3219048
18	32.4	1.9	3.7	chr5	128538382	128538488	(52999771)	+	G-rich	Low_complexity	1	109	(0)	3224262
17	24.2	1.6	3.2	chr5	132369671	132369732	(49168527)	+	(CCCGC)n	Simple_repeat	1	63	(0)	3229279
14	14.6	8.5	2.0	chr5	132437818	132437864	(49100395)	+	G-rich	Low_complexity	1	51	(0)	3229367
244	28.0	13.8	3.2	chr5	132774835	132774989	(48763270)	C	MIRb	SINE/MIR	(74)	194	21	3229895
1596	15.8	4.9	1.4	chr5	133058110	133058387	(48479872)	+	AluJr	SINE/Alu	1	288	(24)	3230480
1959	14.1	1.0	2.2	chr5	133058396	133058707	(48479552)	+	AluSq2	SINE/Alu	1	308	(5)	3230481
18369	7.3	0.4	0.1	chr5	133167356	133171361	(48366898)	C	L1P2	LINE/L1	(2141)	4005	4	3230667
1876	14.7	0.0	4.6	chr5	133192291	133192597	(48345662)	C	AluJo	SINE/Alu	(18)	294	2	3230693
1754	18.2	4.3	7.9	chr5	133192598	133192898	(48345361)	+	MLT2D	LTR/ERVL	112	533	(23)	3230691
215	25.0	10.0	2.7	chr5	134043304	134043377	(47494882)	C	MIRc	SINE/MIR	(127)	141	62	3231817
1988	14.5	0.6	0.3	chr5	134043522	134043832	(47494427)	C	AluJb	SINE/Alu	(0)	312	1	3231818
35	0.0	0.0	0.0	chr5	134371474	134371505	(47166754)	+	(CGG)n	Simple_repeat	1	32	(0)	3232422
607	23.6	4.9	6.8	chr5	134465576	134465805	(47072454)	+	MIRb	SINE/MIR	30	268	(0)	3232623
12	30.2	2.8	2.7	chr5	134905078	134905149	(46633110)	+	(GGCCGGC)n	Simple_repeat	1	74	(0)	3233621
189	23.7	12.3	7.0	chr5	135387152	135387251	(46151008)	+	MIRb	SINE/MIR	67	172	(96)	3234221
773	22.6	6.9	0.0	chr5	135488530	135488772	(46049487)	C	ORSL-2a	DNA/hAT-Tip100	(55)	287	27	3234366
12	10.3	6.1	2.9	chr5	135491645	135491677	(46046582)	+	(GGCGG)n	Simple_repeat	1	35	(0)	3234369
447	31.4	7.0	0.7	chr5	135536367	135536547	(46001712)	+	MIRb	SINE/MIR	14	215	(53)	3234435
2055	17.4	3.3	3.9	chr5	136168916	136169469	(45368790)	C	MLT2A2	LTR/ERVL	(8)	546	1	3235331
6982	15.4	6.5	0.6	chr5	136169471	136171229	(45367030)	C	L1MC1	LINE/L1	(533)	5811	3958	3235330
1824	15.7	0.7	1.7	chr5	138148783	138149082	(43389177)	+	AluJr	SINE/Alu	1	297	(15)	3238239
17	21.3	4.1	0.0	chr5	138543114	138543162	(42995097)	+	(GGC)n	Simple_repeat	1	51	(0)	3239069
10596	3.2	0.6	8.3	chr5	139111826	139113290	(42424969)	+	SVA_C	Retroposon/SVA	12	1361	(23)	3240100
2021	10.9	0.3	4.9	chr5	139208399	139208702	(42329557)	C	AluSz	SINE/Alu	(20)	292	3	3240287
1653	23.3	9.6	2.9	chr5	139208703	139209013	(42329246)	+	MLT1H1	LTR/ERVL-MaLR	157	498	(57)	3240286
203	29.2	4.3	11.9	chr5	139651919	139652019	(41886240)	C	L2c	LINE/L2	(0)	3387	3295	3241248
16	22.7	5.6	1.8	chr5	139739174	139739227	(41799032)	+	(GT)n	Simple_repeat	1	57	(0)	3241424
994	25.8	11.5	3.9	chr5	139789639	139790134	(41748125)	C	L2a	LINE/L2	(3)	3423	2878	3241528
27	13.7	0.0	0.0	chr5	139912331	139912378	(41625881)	+	(CAGCC)n	Simple_repeat	1	48	(0)	3241711
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
529	28.9	13.1	4.3	chr5	140165101	140165703	(41372556)	C	L2a	LINE/L2	(95)	3292	2616	3242113
2253	9.3	2.0	0.0	chr5	140299323	140299611	(41238648)	+	AluSc	SINE/Alu	1	295	(14)	3242322
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
1157	15.6	18.5	0.0	chr5	141334345	141334467	(40203792)	+	AluJb	SINE/Alu	2	173	(139)	3243891
29	3.2	0.0	0.0	chr5	141334468	141334499	(40203760)	+	(GCGGG)n	Simple_repeat	1	32	(0)	3243892
1157	15.6	18.5	0.0	chr5	141334500	141334614	(40203645)	+	AluJb	SINE/Alu	176	293	(19)	3243891
12	23.3	2.5	0.0	chr5	141334680	141334719	(40203540)	+	(AGAGAC)n	Simple_repeat	1	41	(0)	3243893
22	23.6	1.5	1.5	chr5	141682231	141682296	(39855963)	+	(CCCGC)n	Simple_repeat	1	67	(0)	3244398
11	17.3	7.7	0.0	chr5	141869565	141869603	(39668656)	+	(CAGAATCC)n	Simple_repeat	1	42	(0)	3244763
14	15.7	0.0	5.1	chr5	141869741	141869779	(39668480)	+	(CTCTTTG)n	Simple_repeat	1	39	(0)	3244764
1639	11.3	5.4	0.0	chr5	142046525	142046753	(39491506)	C	AluSx1	SINE/Alu	(33)	279	38	3245123
217	29.0	5.1	10.6	chr5	142223712	142223788	(39314471)	C	L2c	LINE/L2	(68)	3319	3250	3245486
324	30.8	1.9	0.0	chr5	142223788	142223805	(39314454)	C	MIRb	SINE/MIR	(0)	268	251	3245488
1540	15.1	0.0	1.7	chr5	142223806	142224037	(39314222)	+	AluJb	SINE/Alu	1	228	(84)	3245489
279	20.6	14.1	1.4	chr5	142325594	142325667	(39212592)	C	MamRep488	DNA/hAT-Tip100	(77)	142	58	3245724
509	31.6	20.8	7.8	chr5	142327451	142327943	(39210316)	C	L2b	LINE/L2	(30)	3345	2804	3245727
1832	21.3	3.0	1.3	chr5	142799545	142799930	(38738329)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	3246685
1210	30.3	11.1	6.2	chr5	143080138	143081332	(38456927)	C	L2a	LINE/L2	(0)	3426	2146	3247144
12	13.9	0.0	0.0	chr5	143403958	143403981	(38134278)	+	(GGC)n	Simple_repeat	1	24	(0)	3247590
1371	21.2	9.7	1.9	chr5	145772387	145772746	(35765513)	C	MSTD	LTR/ERVL-MaLR	(5)	391	1	3251252
14	19.4	2.3	2.3	chr5	145835254	145835296	(35702963)	+	(CCGCGCG)n	Simple_repeat	1	44	(0)	3251378
226	30.9	6.0	5.3	chr5	146565913	146566045	(34972214)	C	MLT1O	LTR/ERVL-MaLR	(404)	138	5	3252789
21	11.2	0.0	0.0	chr5	147453968	147453997	(34084262)	+	(T)n	Simple_repeat	1	30	(0)	3254266
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
17	3.7	0.0	6.2	chr5	148826474	148826505	(32711754)	+	(GGAGG)n	Simple_repeat	1	32	(0)	3256513
399	31.8	2.5	0.7	chr5	148979021	148979175	(32559084)	C	L2c	LINE/L2	(228)	3159	3002	3256796
391	35.5	1.7	6.4	chr5	149049306	149049484	(32488775)	+	MIRb	SINE/MIR	15	190	(78)	3256930
1738	15.3	0.7	5.7	chr5	149049485	149049798	(32488461)	+	AluJb	SINE/Alu	1	298	(14)	3256931
21	15.3	2.1	5.0	chr5	149271777	149271834	(32266425)	+	G-rich	Low_complexity	1	56	(0)	3257348
201	20.5	0.0	2.5	chr5	149272550	149272589	(32265670)	+	L3	LINE/CR1	4042	4080	(19)	3257347
204	34.7	8.3	10.9	chr5	149344959	149345307	(32192952)	+	L2b	LINE/L2	2994	3332	(43)	3257530
238	32.3	11.5	1.8	chr5	149367678	149367841	(32170418)	C	MIR3	SINE/MIR	(18)	190	9	3257579
2181	10.6	0.3	0.7	chr5	149608376	149608668	(31929591)	C	AluSg	SINE/Alu	(17)	293	2	3258116
289	29.4	8.3	2.9	chr5	149608670	149608807	(31929452)	C	MIR	SINE/MIR	(100)	162	18	3258117
245	21.1	21.5	1.1	chr5	149728688	149728803	(31809456)	+	MIR3	SINE/MIR	9	149	(119)	3258401
351	29.8	9.0	1.2	chr5	149732704	149732870	(31805389)	C	MIRc	SINE/MIR	(25)	183	9	3258415
591	21.1	3.9	1.3	chr5	149732847	149732995	(31805264)	+	MIRc	SINE/MIR	8	160	(108)	3258416
563	30.8	15.5	0.5	chr5	150160841	150161392	(31376867)	C	L2c	LINE/L2	(0)	3387	2719	3259336
188	29.5	6.7	2.5	chr5	150162081	150162222	(31376037)	C	UCON80_AMi	Unknown	(5)	272	85	3259338
491	33.1	14.9	3.8	chr5	150163857	150164229	(31374030)	+	L2b	LINE/L2	2954	3375	(0)	3259342
1969	11.2	5.2	0.4	chr5	150441466	150441741	(31096518)	+	AluSx1	SINE/Alu	1	290	(22)	3259950
501	14.1	7.6	0.0	chr5	150450124	150450208	(31088051)	+	FLAM_A	SINE/Alu	10	101	(41)	3259966
67	0.0	0.0	0.0	chr5	150459073	150459132	(31079127)	+	(GTGGAGG)n	Simple_repeat	1	60	(0)	3259992
300	33.5	3.4	0.6	chr5	150496504	150496624	(31041635)	C	MIR3	SINE/MIR	(57)	151	33	3260100
675	30.0	7.6	0.0	chr5	150523378	150523607	(31014652)	C	MIR	SINE/MIR	(8)	254	6	3260161
1866	17.6	0.7	0.0	chr5	150593462	150593757	(30944502)	C	AluJb	SINE/Alu	(12)	300	3	3260310
337	21.9	11.8	0.0	chr5	150624997	150625101	(30913158)	+	MIR3	SINE/MIR	36	154	(54)	3260386
13	6.5	8.8	2.7	chr5	150630696	150630743	(30907516)	+	(CTCCCTC)n	Simple_repeat	1	50	(0)	3260399
14	12.7	0.0	0.0	chr5	150656530	150656555	(30881704)	+	(CCG)n	Simple_repeat	1	26	(0)	3260455
33	21.1	3.1	5.3	chr5	151252744	151252870	(30285389)	+	(GCCCC)n	Simple_repeat	1	131	(0)	3261497
12	24.5	4.5	0.0	chr5	151758558	151758601	(29779658)	+	(GGC)n	Simple_repeat	1	46	(0)	3262583
325	20.6	5.2	0.0	chr5	154202643	154202715	(27335544)	+	MIRb	SINE/MIR	96	172	(96)	3266648
1913	12.4	6.6	5.8	chr5	154969081	154969458	(26568801)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3268398
24575	6.7	0.6	0.7	chr5	157720951	157727128	(23811131)	+	L1PA6	LINE/L1	174	6323	(4)	3273259
15	9.9	0.0	7.9	chr5	159916274	159916323	(21621936)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	3276975
1209	22.9	12.1	12.3	chr5	160165663	160166166	(21372093)	+	MLT1K	LTR/ERVL-MaLR	4	506	(89)	3277541
11	9.9	5.6	5.3	chr5	163437836	163437871	(18100388)	+	(GGTGCG)n	Simple_repeat	1	38	(0)	3282556
4907	11.8	4.1	1.9	chr5	163915009	163915789	(17622470)	C	LTR1A1	LTR/ERV1	(0)	799	1	3283277
206	36.2	4.7	4.7	chr5	167827908	167828078	(13710181)	+	L2b	LINE/L2	2925	3095	(280)	3288921
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
2270	10.2	7.6	0.8	chr5	169006958	169007312	(12530947)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3291094
8228	20.2	11.3	3.1	chr5	169156745	169158999	(12379260)	+	L1MDa	LINE/L1	18	2581	(4052)	3291349
14	9.6	10.4	3.8	chr5	171419420	171419467	(10118792)	+	(AGGC)n	Simple_repeat	1	53	(0)	3295243
15	24.0	2.0	1.9	chr5	171419565	171419615	(10118644)	+	(CCGGCC)n	Simple_repeat	1	52	(0)	3295244
346	30.5	10.2	3.9	chr5	171615167	171615395	(9922864)	C	MIRb	SINE/MIR	(21)	247	3	3295684
1744	16.9	1.6	0.0	chr5	171996390	171996644	(9541615)	+	AluJb	SINE/Alu	6	264	(48)	3296442
19	18.9	0.0	0.0	chr5	172006555	172006596	(9531663)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	3296455
225	30.3	8.4	0.7	chr5	172103126	172103268	(9434991)	+	MIRc	SINE/MIR	26	180	(88)	3296680
22	18.4	2.6	6.2	chr5	172175331	172175411	(9362848)	+	G-rich	Low_complexity	1	78	(0)	3296858
14	24.9	1.3	6.6	chr5	172284016	172284090	(9254169)	+	(CCCCGGC)n	Simple_repeat	1	76	(0)	3297093
29	27.4	4.1	3.3	chr5	172284162	172284320	(9253939)	+	GA-rich	Low_complexity	1	160	(0)	3297094
279	21.9	3.0	1.5	chr5	172284939	172285003	(9253256)	C	UCON54	Unknown	(62)	116	51	3297095
936	4.7	0.0	0.0	chr5	172314758	172314863	(9223396)	+	AluYc	SINE/Alu	183	288	(11)	3297164
116	17.2	3.6	0.4	chr5	172344911	172345158	(9193101)	+	GA-rich	Low_complexity	1	257	(0)	3297236
13	13.2	6.1	0.0	chr5	172641169	172641215	(8897044)	+	(GGAGGC)n	Simple_repeat	1	49	(0)	3297896
19	28.0	0.0	2.9	chr5	172641218	172641285	(8896974)	+	(CCG)n	Simple_repeat	1	68	(0)	3297897
31	0.0	0.0	0.0	chr5	172834268	172834296	(8703963)	+	(GGCGAGT)n	Simple_repeat	1	29	(0)	3298313
17	17.7	2.1	4.1	chr5	172834301	172834348	(8703911)	+	(GGC)n	Simple_repeat	1	49	(0)	3298314
13	17.2	3.9	5.7	chr5	172983718	172983768	(8554491)	+	G-rich	Low_complexity	1	53	(0)	3298674
238	31.0	7.4	0.9	chr5	173055974	173056087	(8482172)	+	MIRc	SINE/MIR	108	229	(39)	3298841
13	12.7	0.0	0.0	chr5	173317503	173317528	(8220731)	+	(GCCCT)n	Simple_repeat	1	26	(0)	3299406
230	22.1	11.5	0.0	chr5	173332143	173332219	(8206040)	+	Tigger16a	DNA/TcMar-Tigger	97	183	(774)	3299416
768	31.5	3.4	1.6	chr5	173803022	173803279	(7734980)	+	MIRb	SINE/MIR	6	268	(0)	3300326
206	22.0	4.8	3.3	chr5	174503881	174503941	(7034318)	C	MamRTE1	LINE/RTE-BovB	(2552)	1260	1199	3301609
29	11.4	2.0	2.0	chr5	174693771	174693820	(6844439)	+	GA-rich	Low_complexity	1	51	(0)	3302028
256	33.9	11.7	3.0	chr5	174693884	174694332	(6843927)	C	L2a	LINE/L2	(69)	3357	2828	3302029
339	28.2	19.5	1.6	chr5	175627926	175628181	(5910078)	C	L2b	LINE/L2	(379)	3040	2728	3303789
787	24.8	17.5	0.9	chr5	176411394	176411727	(5126532)	+	L2a	LINE/L2	3026	3426	(0)	3305197
13	4.8	12.5	3.7	chr5	176630473	176630494	(4907765)	+	(CTCGCGCAG)n	Simple_repeat	1	25	(0)	3305697
27	0.0	0.0	0.0	chr5	176630495	176630520	(4907739)	+	(GCTCCG)n	Simple_repeat	1	26	(0)	3305698
13	4.8	12.5	3.7	chr5	176630521	176630545	(4907714)	+	(CTCGCGCAG)n	Simple_repeat	8	33	(0)	3305699
450	29.1	3.2	8.5	chr5	176630697	176630861	(4907398)	+	MIRb	SINE/MIR	2	157	(111)	3305700
15	11.1	0.0	3.2	chr5	176810418	176810448	(4727811)	+	(CCCCG)n	Simple_repeat	1	31	(0)	3306042
17	3.8	0.0	6.5	chr5	176817932	176817962	(4720297)	+	(CCGC)n	Simple_repeat	1	31	(0)	3306050
296	26.0	16.3	0.0	chr5	176818497	176818619	(4719640)	C	MIRb	SINE/MIR	(56)	212	66	3306053
463	35.4	4.2	3.4	chr5	176822929	176823282	(4714977)	C	L2	LINE/L2	(576)	2843	2487	3306060
217	30.4	5.6	1.9	chr5	176845362	176845465	(4692794)	+	L2b	LINE/L2	3012	3119	(256)	3306104
241	31.9	5.2	3.4	chr5	176846513	176846708	(4691551)	+	L2b	LINE/L2	3119	3321	(66)	3306104
201	20.8	3.6	0.0	chr5	177425868	177425920	(4112339)	+	MIR1_Amn	SINE/MIR	96	150	(80)	3307398
11	11.1	6.9	0.0	chr5	177425969	177425997	(4112262)	+	(GGCCGA)n	Simple_repeat	1	31	(0)	3307399
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
14	24.3	2.0	2.0	chr5	177455933	177455982	(4082277)	+	(GCCCT)n	Simple_repeat	1	51	(0)	3307453
11	20.6	5.1	0.0	chr5	177468974	177469012	(4069247)	+	G-rich	Low_complexity	1	41	(0)	3307477
189	24.5	0.0	0.0	chr5	177469462	177469511	(4068748)	+	MIRc	SINE/MIR	112	163	(67)	3307476
14	19.8	2.3	2.3	chr5	177472963	177473005	(4065254)	+	G-rich	Low_complexity	1	44	(0)	3307479
13	8.1	0.0	6.7	chr5	177473021	177473050	(4065209)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3307480
8110	6.3	1.2	0.2	chr5	177561137	177562133	(3976126)	+	LTR13	LTR/ERVK	1	1007	(0)	3307628
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
16	14.2	5.1	0.0	chr5	178113402	178113440	(3424819)	+	G-rich	Low_complexity	1	41	(0)	3308587
2415	7.7	0.3	0.0	chr5	178154155	178154451	(3383808)	C	AluSp	SINE/Alu	(15)	298	1	3308662
12	10.6	2.9	5.7	chr5	178232817	178232850	(3305409)	+	(CGCCC)n	Simple_repeat	1	35	(0)	3308834
730	27.0	7.4	0.8	chr5	178331301	178331539	(3206720)	+	MIRb	SINE/MIR	1	256	(12)	3308995
439	15.5	0.0	0.0	chr5	178547381	178547451	(2990808)	+	MLT2C1	LTR/ERVL	452	522	(41)	3309373
257	23.4	1.8	0.2	chr5	178547460	178548076	(2990183)	+	(CA)n	Simple_repeat	1	628	(0)	3309374
1889	16.9	0.7	0.0	chr5	179754002	179754297	(1783962)	+	AluJb	SINE/Alu	1	298	(14)	3311529
25	18.1	1.5	3.0	chr5	179806880	179806945	(1731314)	+	G-rich	Low_complexity	1	67	(0)	3311614
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
15	22.8	3.7	1.8	chr5	180116430	180116483	(1421776)	+	(CCTTCCT)n	Simple_repeat	1	56	(0)	3312106
2342	7.4	0.6	0.6	chr5	180292807	180293118	(1245141)	+	AluSx1	SINE/Alu	1	312	(0)	3312367
282	27.3	0.0	2.5	chr5	180595351	180595429	(942830)	C	MLT1D	LTR/ERVL-MaLR	(311)	194	118	3312962
15	29.6	2.0	0.0	chr5	180809785	180809833	(728426)	+	(AC)n	Simple_repeat	1	50	(0)	3313277
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
1611	16.8	0.0	4.5	chr5	180873343	180873628	(664631)	+	AluJb	SINE/Alu	36	308	(4)	3313385
1037	20.8	10.3	3.4	chr5	180873772	180874188	(664071)	+	MLT2B4	LTR/ERVL	1	414	(0)	3313386
1648	13.6	19.8	1.9	chr5	181028010	181028368	(509891)	C	LTR1A2	LTR/ERV1	(392)	445	7	3313540
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
14	25.2	0.0	5.3	chr5	181246451	181246507	(291752)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3313921
523	23.9	2.2	0.0	chr6	308671	308804	(170497175)	+	L1MB7	LINE/L1	6035	6171	(13)	3314673
13	14.4	5.0	2.4	chr6	692814	692853	(170113126)	+	G-rich	Low_complexity	1	42	(0)	3315113
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
2934	16.8	10.6	5.7	chr6	859944	860557	(169945422)	C	LTR8A	LTR/ERV1	(67)	660	1	3315323
11	26.4	5.6	0.0	chr6	1624316	1624369	(169181610)	+	(GCCTCCC)n	Simple_repeat	1	57	(0)	3316395
471	28.7	8.6	0.6	chr6	1686213	1686394	(169119585)	C	UCON8	DNA	(821)	294	97	3316466
2324	17.8	6.7	2.1	chr6	2937689	2938414	(167867565)	C	LTR1A2	LTR/ERV1	(0)	837	22	3318132
389	12.3	8.4	0.0	chr6	2938421	2938485	(167867494)	C	L1MA8	LINE/L1	(76)	6215	6145	3318133
190	19.4	7.7	11.1	chr6	2952809	2952889	(167853090)	C	MamRTE1	LINE/RTE-BovB	(1252)	2560	2483	3318154
51	22.4	3.1	5.0	chr6	2999648	2999841	(167806138)	+	G-rich	Low_complexity	1	200	(0)	3318233
15	27.1	4.5	0.0	chr6	3068925	3068990	(167736989)	+	G-rich	Low_complexity	1	69	(0)	3318348
15	23.0	2.9	8.6	chr6	3118584	3118685	(167687294)	+	(GGCGG)n	Simple_repeat	1	105	(0)	3318430
697	18.5	0.7	0.7	chr6	3209274	3209409	(167596570)	+	MER5A1	DNA/hAT-Charlie	27	162	(4)	3318577
302	28.1	14.3	4.0	chr6	3438559	3438858	(167367121)	C	MamRep434	DNA/TcMar-Tigger	(3)	423	88	3318888
938	15.9	1.9	8.4	chr6	3439080	3439306	(167366673)	C	MER20	DNA/hAT-Charlie	(0)	219	8	3318889
1747	18.6	6.1	3.1	chr6	3498668	3498713	(167307266)	C	MER74A	LTR/ERVL	(40)	518	480	3318993
2109	13.2	0.0	1.9	chr6	3498714	3499023	(167306956)	+	AluSp	SINE/Alu	1	304	(9)	3318994
227	30.9	4.3	1.8	chr6	3503769	3503880	(167302099)	+	MamGypLTR2b	LTR/Gypsy	2	116	(952)	3319002
1273	25.2	7.4	3.3	chr6	3511574	3511639	(167294340)	+	LTR16A2	LTR/ERVL	10	69	(426)	3319019
2345	12.7	8.3	0.2	chr6	3511640	3512035	(167293944)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	3319020
2242	18.0	7.0	2.7	chr6	3545968	3546457	(167259522)	C	MLT2B1	LTR/ERVL	(36)	519	1	3319066
256	27.4	6.7	0.0	chr6	3749357	3749440	(167056539)	C	CR1-3_Croc	LINE/CR1	(832)	2773	2684	3319352
15635	9.3	1.0	0.9	chr6	6069787	6072877	(164733102)	C	L1P2	LINE/L1	(3063)	3083	5	3322952
4699	12.4	4.4	1.2	chr6	6694476	6695231	(164110748)	C	LTR1	LTR/ERV1	(2)	781	1	3323769
15	18.8	7.0	1.6	chr6	7541463	7541519	(163264460)	+	(GGCGCAG)n	Simple_repeat	1	61	(0)	3325356
580	19.8	31.7	3.0	chr6	7587659	7587960	(163218019)	C	MLT1B	LTR/ERVL-MaLR	(0)	467	1	3325410
1469	29.1	6.2	0.2	chr6	8235191	8235648	(162570331)	C	LTR33A	LTR/ERVL	(14)	506	20	3326417
6470	11.4	0.5	0.5	chr6	10918833	10919967	(159886012)	C	L1PBa1	LINE/L1	(4835)	2028	889	3330435
2043	16.6	2.5	4.3	chr6	11089768	11089924	(159716055)	+	MLT1A0	LTR/ERVL-MaLR	1	152	(213)	3330716
2005	15.7	0.3	0.6	chr6	11089925	11090236	(159715743)	+	AluJb	SINE/Alu	1	311	(1)	3330717
22	15.1	4.8	3.0	chr6	12009028	12009090	(158796889)	+	(GCGGAGG)n	Simple_repeat	1	66	(0)	3332068
30	0.0	0.0	0.0	chr6	12288559	12288586	(158517393)	+	(TGGGTG)n	Simple_repeat	1	28	(0)	3332457
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
1208	26.5	8.7	3.1	chr6	13724136	13724560	(157081419)	C	LTR16A1	LTR/ERVL	(0)	456	6	3334762
2062	12.4	0.0	0.7	chr6	14841726	14842007	(155963972)	C	AluSz	SINE/Alu	(28)	284	5	3336632
1330	27.5	2.0	2.5	chr6	14842021	14842427	(155963552)	C	L1ME5	LINE/L1	(248)	5946	5542	3336630
19	21.4	6.9	1.3	chr6	15248822	15248893	(155557086)	+	(GGC)n	Simple_repeat	1	77	(0)	3337662
4576	12.0	9.3	2.1	chr6	15435926	15436700	(155369279)	C	LTR1A2	LTR/ERV1	(0)	837	1	3337951
29	16.0	5.5	4.2	chr6	16238600	16238690	(154567289)	+	(GCC)n	Simple_repeat	1	96	(0)	3339210
510	36.2	15.4	0.6	chr6	16277566	16277912	(154528067)	C	L2b	LINE/L2	(3)	3372	2965	3339271
28	0.0	0.0	0.0	chr6	16316866	16316892	(154489087)	+	(T)n	Simple_repeat	1	27	(0)	3339328
451	33.0	11.4	2.3	chr6	16838295	16838508	(153967471)	+	MIRb	SINE/MIR	18	253	(15)	3340139
1420	29.5	8.8	6.5	chr6	17042598	17043363	(153762616)	C	L1ME1	LINE/L1	(5754)	793	9	3340458
4258	25.6	10.1	6.2	chr6	17741537	17742119	(153063860)	C	L1M2a	LINE/L1	(6447)	721	80	3341706
676	10.9	0.0	0.0	chr6	18533870	18533961	(152272018)	C	AluYj4	SINE/Alu	(2)	309	218	3343234
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
5293	10.0	4.8	2.3	chr6	20702124	20702939	(150103040)	C	LTR1A2	LTR/ERV1	(0)	837	1	3346484
1246	19.5	0.0	0.0	chr6	24504418	24504627	(146301352)	+	MER58A	DNA/hAT-Charlie	15	224	(0)	3352057
23	14.7	2.2	0.0	chr6	24720260	24720304	(146085675)	+	(GGC)n	Simple_repeat	1	46	(0)	3352413
1952	16.1	1.7	11.1	chr6	24761228	24761746	(146044233)	C	MER52C	LTR/ERV1	(699)	579	1	3352502
267	17.5	3.4	3.4	chr6	24761747	24761804	(146044175)	+	Zaphod3	DNA/hAT-Tip100	172	229	(2394)	3352503
13	12.7	2.6	5.1	chr6	25279351	25279388	(145526591)	+	(CCCCG)n	Simple_repeat	1	39	(0)	3353384
1155	26.6	7.1	3.4	chr6	26336287	26336722	(144469257)	+	MER90	LTR/ERV1	107	559	(16)	3355050
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
748	2.4	0.0	0.0	chr6	27505828	27505909	(143300070)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3357009
903	26.0	9.9	1.5	chr6	27651169	27651508	(143154471)	+	L1ME3A	LINE/L1	5643	6014	(159)	3357300
31	0.0	0.0	0.0	chr6	27651559	27651585	(143154394)	+	(GT)n	Simple_repeat	1	27	(0)	3357301
252	23.7	0.0	6.3	chr6	27651713	27651775	(143154204)	C	MLT2D	LTR/ERVL	(65)	495	437	3357302
13	29.3	3.5	0.0	chr6	33578856	33578913	(137227066)	+	(CCCAGCG)n	Simple_repeat	1	60	(0)	3366770
217	32.2	0.5	0.0	chr6	33590549	33590651	(137215328)	+	MIR1_Amn	SINE/MIR	86	190	(78)	3366791
181	34.4	5.9	0.0	chr6	33669176	33669271	(137136708)	C	MamTip2	DNA/hAT-Tip100	(0)	305	204	3366967
3022	13.8	11.5	7.7	chr6	34457226	34457518	(136348461)	C	MER39	LTR/ERV1	(0)	707	439	3368446
7312	12.2	7.0	4.0	chr6	34457519	34458755	(136347224)	+	MER52C	LTR/ERV1	1	1278	(0)	3368447
468	27.3	17.4	0.6	chr6	34546512	34546673	(136259306)	C	MER91A	DNA/hAT-Tip100	(1)	195	1	3368630
333	28.9	6.3	2.8	chr6	34575287	34575488	(136230491)	+	L2b	LINE/L2	3175	3381	(45)	3368692
223	27.3	8.3	0.0	chr6	34697140	34697205	(136108774)	C	MIR3	SINE/MIR	(56)	152	81	3368937
14	15.7	0.0	5.1	chr6	34889208	34889246	(135916733)	+	G-rich	Low_complexity	1	39	(0)	3369411
197	27.7	5.1	5.9	chr6	35181755	35181873	(135624106)	C	L2b	LINE/L2	(20)	3355	3238	3369861
239	31.2	4.0	0.0	chr6	35182034	35182129	(135623850)	C	L2a	LINE/L2	(14)	3412	3313	3369862
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
434	23.6	5.2	1.8	chr6	35302870	35302981	(135502998)	+	MIRb	SINE/MIR	94	209	(59)	3370077
463	21.1	2.1	0.0	chr6	35342211	35342305	(135463674)	+	MIR3	SINE/MIR	96	192	(16)	3370168
2197	11.2	1.3	2.6	chr6	35454055	35454367	(135351612)	C	AluSx4	SINE/Alu	(1)	309	1	3370416
54	0.0	0.0	0.0	chr6	35726537	35726582	(135079397)	+	(CA)n	Simple_repeat	1	46	(0)	3371013
11	24.1	0.0	0.0	chr6	35776922	35776955	(135029024)	+	(CCCCCG)n	Simple_repeat	1	34	(0)	3371123
15	26.1	0.0	1.9	chr6	35805334	35805385	(135000594)	+	(GGAGCCG)n	Simple_repeat	1	52	(0)	3371201
19	11.7	0.0	0.0	chr6	36544327	36544354	(134261625)	+	(A)n	Simple_repeat	1	28	(0)	3372731
230	30.9	1.4	0.0	chr6	36577536	36577603	(134228376)	C	MamRep1894	DNA/hAT	(54)	69	1	3372830
2301	10.1	0.3	1.3	chr6	36577657	36577963	(134228016)	C	AluSx3	SINE/Alu	(7)	304	1	3372831
360	30.9	7.6	3.0	chr6	36662894	36663093	(134142886)	+	MamTip2	DNA/hAT-Tip100	1	210	(95)	3373037
12	9.7	5.4	5.1	chr6	36839950	36839986	(133965993)	+	(GGCTCCG)n	Simple_repeat	1	39	(0)	3373406
26	18.9	0.0	0.0	chr6	36840090	36840138	(133965841)	+	(GT)n	Simple_repeat	1	49	(0)	3373407
235	28.9	14.9	1.0	chr6	36848590	36848687	(133957292)	C	L3b	LINE/CR1	(239)	4993	4880	3373432
14	7.1	6.2	2.9	chr6	36960626	36960657	(133845322)	+	(CCCT)n	Simple_repeat	1	34	(0)	3373650
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
2398	8.6	0.3	0.6	chr6	36990003	36990316	(133815663)	+	AluSp	SINE/Alu	1	313	(0)	3373676
1936	9.8	0.0	0.0	chr6	37104269	37104512	(133701467)	C	AluSx1	SINE/Alu	(68)	244	1	3373949
367	23.2	5.3	14.1	chr6	37178037	37178115	(133627864)	+	L1ME3C	LINE/L1	5935	6004	(119)	3374148
1959	16.5	0.0	0.3	chr6	37178116	37178424	(133627555)	+	AluJb	SINE/Alu	5	312	(0)	3374149
7127	13.0	5.2	3.8	chr6	37221661	37222920	(133583059)	C	MER52C	LTR/ERV1	(0)	1278	1	3374268
126	6.5	5.1	0.0	chr6	37698157	37698352	(133107627)	+	(TC)n	Simple_repeat	1	206	(0)	3375153
296	34.1	3.5	2.0	chr6	37732123	37732274	(133073705)	C	MIR3	SINE/MIR	(15)	193	39	3375231
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
35	32.1	0.0	3.2	chr6	37819869	37819939	(132986040)	+	(CCCGCC)n	Simple_repeat	36	150	(0)	3375438
340	23.5	9.6	4.4	chr6	38178459	38178772	(132627207)	C	L2c	LINE/L2	(92)	3283	2937	3376001
28	0.0	0.0	0.0	chr6	38178845	38178871	(132627108)	+	(TATT)n	Simple_repeat	1	27	(0)	3376002
2284	9.0	0.0	0.0	chr6	38178872	38179150	(132626829)	C	AluSc	SINE/Alu	(30)	279	1	3376003
2018	10.3	0.0	11.2	chr6	39213708	39214038	(131591941)	+	AluSx3	SINE/Alu	1	294	(17)	3377661
15	17.0	5.0	0.0	chr6	41041326	41041365	(129764614)	+	(CCACCC)n	Simple_repeat	1	42	(0)	3380536
13	15.9	0.0	9.8	chr6	41073761	41073811	(129732168)	+	(CGCC)n	Simple_repeat	1	51	(0)	3380583
11	21.6	7.3	1.7	chr6	41734213	41734267	(129071712)	+	(GGCCAGC)n	Simple_repeat	1	59	(0)	3381713
13	18.4	5.7	3.6	chr6	41780087	41780139	(129025840)	+	(GCGCGGAG)n	Simple_repeat	1	56	(0)	3381804
15	23.1	1.9	3.6	chr6	41781496	41781549	(129024430)	+	GA-rich	Low_complexity	1	55	(0)	3381806
15	12.6	8.9	2.0	chr6	41786632	41786676	(129019303)	+	(CGG)n	Simple_repeat	1	49	(0)	3381816
229	29.5	1.8	5.9	chr6	42147270	42147388	(128658591)	+	L1ME4b	LINE/L1	651	764	(128)	3382643
188	25.8	12.7	0.0	chr6	42147429	42147488	(128658491)	+	MIRc	SINE/MIR	116	184	(84)	3382644
2289	10.9	0.6	0.3	chr6	42147489	42147799	(128658180)	+	AluSx1	SINE/Alu	1	312	(0)	3382645
190	17.4	8.0	0.0	chr6	42454705	42454750	(128351229)	C	MIRc	SINE/MIR	(129)	139	90	3383282
3455	9.3	10.6	11.0	chr6	42555730	42556366	(128249613)	+	MER51A	LTR/ERV1	1	634	(0)	3383513
275	29.8	3.4	6.6	chr6	42762565	42762667	(128043312)	+	L2a	LINE/L2	3309	3412	(14)	3383973
1591	14.9	8.1	1.1	chr6	42762668	42762942	(128043037)	+	AluJb	SINE/Alu	2	297	(15)	3383974
1943	8.9	3.6	0.0	chr6	42909655	42909923	(127896056)	C	AluSc8	SINE/Alu	(32)	279	1	3384307
31	9.1	0.0	2.0	chr6	42910027	42910075	(127895904)	+	(GT)n	Simple_repeat	1	49	(0)	3384308
29	0.0	0.0	0.0	chr6	42929620	42929646	(127876333)	+	(TGC)n	Simple_repeat	1	27	(0)	3384362
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
12	20.2	2.9	0.0	chr6	43456003	43456036	(127349943)	+	(CTC)n	Simple_repeat	1	35	(0)	3385386
13	16.3	2.8	2.7	chr6	43456099	43456134	(127349845)	+	(CCACC)n	Simple_repeat	1	37	(0)	3385387
44	34.2	2.7	1.9	chr6	43509805	43510061	(127295918)	+	G-rich	Low_complexity	1	264	(0)	3385488
16	16.4	0.0	0.0	chr6	43510148	43510181	(127295798)	+	(CGCGGC)n	Simple_repeat	1	34	(0)	3385489
16	12.7	0.0	5.3	chr6	43770122	43770159	(127035820)	+	G-rich	Low_complexity	1	38	(0)	3385988
977	12.6	0.0	0.7	chr6	43978009	43978160	(126827819)	C	Ricksha_c	DNA/MULE-MuDR	(1544)	504	354	3386359
409	28.9	13.6	2.2	chr6	44048987	44049305	(126756674)	+	L2c	LINE/L2	2829	3190	(197)	3386475
514	28.1	9.2	2.7	chr6	44049399	44049581	(126756398)	C	MIR	SINE/MIR	(52)	210	15	3386476
25	22.7	3.2	4.1	chr6	44139018	44139111	(126666868)	+	(CTC)n	Simple_repeat	1	97	(0)	3386634
19	0.0	0.0	0.0	chr6	44257013	44257033	(126548946)	+	(CT)n	Simple_repeat	1	21	(0)	3386858
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
17	12.7	0.0	0.0	chr6	47290321	47290346	(123515633)	+	(CA)n	Simple_repeat	1	26	(0)	3391520
1623	18.2	0.0	3.9	chr6	47628677	47628984	(123176995)	C	AluJb	SINE/Alu	(12)	300	5	3392042
1560	22.4	7.3	4.1	chr6	52102475	52102911	(118703068)	+	LTR16A1	LTR/ERVL	1	452	(4)	3397987
17	13.2	6.0	7.0	chr6	52362168	52362234	(118443745)	+	(GCTCGG)n	Simple_repeat	1	71	(0)	3398425
1618	20.0	3.5	4.8	chr6	53315032	53315409	(117490570)	C	MLT1A	LTR/ERVL-MaLR	(1)	373	1	3399986
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
20	25.2	0.0	7.6	chr6	53795054	53795075	(117010904)	+	(GCG)n	Simple_repeat	53	103	(0)	3400740
2898	18.9	3.7	4.0	chr6	54236618	54237035	(116568944)	+	Tigger17a	DNA/TcMar-Tigger	222	641	(13)	3401357
782	23.0	7.4	0.9	chr6	54237095	54237322	(116568657)	C	LTR16C	LTR/ERVL	(54)	435	192	3401359
22627	9.8	0.6	1.4	chr6	54327154	54333629	(116472350)	+	L1PA7	LINE/L1	4	6469	(0)	3401490
15	9.4	5.6	2.6	chr6	56843474	56843509	(113962470)	+	G-rich	Low_complexity	1	38	(0)	3404689
1358	13.3	8.4	0.0	chr6	56907888	56908083	(113897896)	+	AluSx	SINE/Alu	86	299	(13)	3404807
14	13.6	0.0	5.6	chr6	57089809	57089844	(113716135)	+	(AACCA)n	Simple_repeat	1	36	(0)	3405115
273	29.6	2.4	0.0	chr6	70220224	70220304	(100585675)	C	MIRc	SINE/MIR	(111)	157	75	3418940
34	0.0	0.0	0.0	chr6	70220390	70220418	(100585561)	+	(GT)n	Simple_repeat	1	29	(0)	3418941
6301	15.7	0.3	0.5	chr6	70363863	70364838	(100441141)	C	LTR1D	LTR/ERV1	(0)	975	2	3419099
714	33.2	7.2	8.0	chr6	70672234	70672684	(100133295)	+	L2b	LINE/L2	2929	3375	(0)	3419590
379	18.8	0.0	0.0	chr6	71278411	71278474	(99527505)	C	MER81	DNA/hAT-Blackjack	(48)	66	3	3420376
523	34.9	5.5	6.4	chr6	72627168	72627685	(98178294)	C	L2c	LINE/L2	(1028)	2391	1879	3422098
417	32.2	8.5	8.3	chr6	72627721	72628154	(98177825)	+	L2c	LINE/L2	2953	3387	(0)	3422097
12	14.8	4.9	4.7	chr6	75413475	75413515	(95392464)	+	(TGTT)n	Simple_repeat	1	43	(0)	3426175
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
296	22.7	1.5	0.0	chr6	75610627	75610692	(95195287)	C	MER81	DNA/hAT-Blackjack	(46)	68	2	3426479
237	31.4	3.4	0.0	chr6	75610699	75610784	(95195195)	C	MLT1H1-int	LTR/ERVL-MaLR	(815)	572	484	3426477
1830	14.6	4.7	0.6	chr6	77368942	77369265	(93436714)	C	LTR1A2	LTR/ERV1	(499)	338	1	3428725
924	23.5	12.4	6.0	chr6	77369266	77369768	(93436211)	+	L1ME4b	LINE/L1	311	850	(42)	3428724
2402	8.4	0.3	0.7	chr6	78462997	78463293	(92342686)	+	AluY	SINE/Alu	1	296	(15)	3430006
297	30.3	4.7	2.7	chr6	80438807	80438952	(90367027)	C	MLT1J1	LTR/ERVL-MaLR	(20)	428	280	3432607
268	32.3	2.0	2.0	chr6	80438940	80439040	(90366939)	C	MLT1J1	LTR/ERVL-MaLR	(90)	358	258	3432607
2941	13.5	1.8	0.7	chr6	82963377	82963824	(87842155)	C	MLT2A2	LTR/ERVL	(0)	453	1	3435852
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
16	6.4	2.6	7.5	chr6	85643496	85643534	(85162445)	+	(CCCCTC)n	Simple_repeat	1	40	(0)	3439345
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
20919	10.6	1.2	6.5	chr6	86236218	86243158	(84562821)	+	L1PA7	LINE/L1	214	6681	(0)	3440043
380	26.5	10.9	7.4	chr6	86969613	86969869	(83836110)	+	MLT1K	LTR/ERVL-MaLR	1	267	(328)	3440860
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
4975	14.6	12.5	2.8	chr6	87916186	87916995	(82888984)	+	LTR1D1	LTR/ERV1	1	899	(0)	3442437
16	18.6	1.6	7.7	chr6	89080343	89080406	(81725573)	+	(TCCCCC)n	Simple_repeat	1	65	(0)	3444133
797	18.4	0.7	0.0	chr6	89139583	89139718	(81666261)	+	AluJb	SINE/Alu	157	293	(19)	3444265
1886	18.9	1.6	0.3	chr6	89298732	89299091	(81506888)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3444527
184	23.3	2.3	0.0	chr6	89313491	89313533	(81492446)	+	MIR3	SINE/MIR	158	201	(7)	3444549
2361	9.5	1.3	0.0	chr6	89313635	89313939	(81492040)	+	AluSz	SINE/Alu	1	309	(3)	3444551
13	23.5	0.0	0.0	chr6	89412325	89412359	(81393620)	+	(CGCG)n	Simple_repeat	1	35	(0)	3444715
1742	17.7	11.3	0.0	chr6	90478005	90478366	(80327613)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3446459
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
22149	9.6	1.3	0.2	chr6	104670788	104677213	(66128766)	+	L1PA7	LINE/L1	8	6469	(0)	3464283
15	22.7	5.7	2.7	chr6	107028291	107028360	(63777619)	+	(CGCGC)n	Simple_repeat	1	74	(0)	3468022
1150	18.5	2.8	0.0	chr6	107510065	107510275	(63295704)	C	MER58A	DNA/hAT-Charlie	(0)	224	8	3468985
16	11.2	3.3	0.0	chr6	107820845	107820874	(62985105)	+	(AGA)n	Simple_repeat	1	31	(0)	3469434
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
334	24.3	9.0	2.6	chr6	108567501	108567614	(62238365)	C	MIR3	SINE/MIR	(21)	187	66	3470843
1746	16.0	0.4	2.1	chr6	108567634	108567764	(62238215)	+	AluJr	SINE/Alu	7	133	(179)	3470844
321	31.8	16.1	2.9	chr6	108897478	108897820	(61908159)	+	Tigger19b	DNA/TcMar-Tigger	99	495	(55)	3471328
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
12	16.9	2.9	2.8	chr6	111873420	111873454	(58932525)	+	(GCT)n	Simple_repeat	1	36	(0)	3476294
225	25.0	1.5	0.0	chr6	111953009	111953072	(58852907)	+	L2a	LINE/L2	3358	3422	(4)	3476425
16	31.6	4.7	0.0	chr6	114343041	114343047	(56462932)	+	(CTCCCG)n	Simple_repeat	1	25	(65)	3479982
19	21.9	4.6	1.5	chr6	114343048	114343112	(56462867)	+	(CTC)n	Simple_repeat	1	68	(0)	3479983
16	31.6	4.7	0.0	chr6	114343113	114343126	(56462853)	+	(CTCCCG)n	Simple_repeat	26	90	(0)	3479982
2288	10.8	1.0	0.0	chr6	116397200	116397506	(54408473)	C	AluSx1	SINE/Alu	(2)	310	1	3482511
274	13.3	20.0	0.0	chr6	116412578	116412637	(54393342)	C	MER112	DNA/hAT-Charlie	(0)	261	193	3482529
13	18.1	2.0	6.0	chr6	116412640	116412688	(54393291)	+	(TTTTAG)n	Simple_repeat	1	50	(0)	3482530
23566	7.9	0.8	0.6	chr6	116500870	116507021	(54298958)	+	L1PA6	LINE/L1	5	6151	(3)	3482647
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
24	17.9	5.4	2.6	chr6	118893924	118893997	(51911982)	+	(CCG)n	Simple_repeat	1	78	(0)	3485824
21	22.8	1.4	4.1	chr6	118935172	118935243	(51870736)	+	G-rich	Low_complexity	1	73	(0)	3485880
267	8.5	11.3	0.0	chr6	122455158	122455204	(48350775)	+	MLT2A2	LTR/ERVL	3	55	(398)	3490428
3383	5.9	0.9	1.6	chr6	122455208	122455654	(48350325)	+	MLT2A1	LTR/ERVL	1	444	(0)	3490429
6516	19.6	2.9	3.1	chr6	122568244	122572317	(48233662)	+	L1PB2	LINE/L1	49	3224	(3638)	3490580
15	26.9	2.6	5.0	chr6	123803350	123803427	(47002552)	+	(CGC)n	Simple_repeat	1	80	(0)	3492190
6166	11.6	3.8	0.4	chr6	125120074	125121095	(45684884)	+	MER41-int	LTR/ERV1	361	2093	(5444)	3493882
12	4.5	4.0	3.9	chr6	125528842	125528866	(45277113)	+	(TCCC)n	Simple_repeat	1	26	(0)	3494456
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
12	16.1	0.0	3.3	chr6	125791095	125791124	(45014855)	+	(CGC)n	Simple_repeat	1	30	(0)	3494828
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
5289	11.0	2.6	1.3	chr6	130223672	130224435	(40581544)	C	LTR1A1	LTR/ERV1	(25)	774	1	3500614
1188	16.3	4.7	1.2	chr6	131112248	131112496	(39693483)	C	L1MB7	LINE/L1	(0)	6184	5927	3501849
319	17.2	0.0	1.5	chr6	131112498	131112562	(39693417)	C	L1MB7	LINE/L1	(658)	5520	5457	3501849
1363	16.4	2.4	0.5	chr6	131112564	131112771	(39693208)	C	AluSx	SINE/Alu	(96)	216	5	3501850
2982	18.6	9.7	3.3	chr6	134080150	134080823	(36725156)	+	MER72	LTR/ERV1	1	722	(0)	3506139
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
25	22.9	4.9	4.7	chr6	137866994	137867115	(32938864)	+	G-rich	Low_complexity	1	128	(0)	3512115
13	19.6	0.0	0.0	chr6	138036358	138036387	(32769592)	+	(GGTGG)n	Simple_repeat	1	30	(0)	3512380
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
384	33.9	6.0	2.2	chr6	138455548	138455725	(32350254)	+	MIRc	SINE/MIR	43	227	(41)	3512977
13	20.7	4.3	2.1	chr6	138693515	138693560	(32112419)	+	(GCTCC)n	Simple_repeat	1	48	(0)	3513361
185	33.3	7.7	0.0	chr6	139278464	139278547	(31527432)	C	MamSINE1	SINE/tRNA-RTE	(24)	266	176	3514387
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
2270	9.8	0.7	0.3	chr6	144095894	144096180	(26709799)	C	AluYc	SINE/Alu	(11)	288	1	3520847
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
2263	9.8	7.1	1.2	chr6	144413304	144413645	(26392334)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3521393
6679	13.3	3.9	1.8	chr6	144413646	144413809	(26392170)	+	Tigger3b	DNA/TcMar-Tigger	145	298	(933)	3521392
8849	25.4	4.1	4.3	chr6	145582480	145584928	(25221051)	C	L1PA15	LINE/L1	(4341)	2444	1	3522949
1929	10.9	4.6	4.3	chr6	145964598	145964900	(24841079)	+	AluSx	SINE/Alu	1	304	(8)	3523418
15	20.7	0.0	7.0	chr6	146543641	146543697	(24262282)	+	(CCGGC)n	Simple_repeat	1	57	(0)	3524169
12	24.0	2.6	0.0	chr6	147508629	147508667	(23297312)	+	(GCG)n	Simple_repeat	1	40	(0)	3525502
771	18.2	7.3	4.6	chr6	148972771	148972943	(21833036)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3527735
54	7.0	0.0	0.0	chr6	149249117	149249191	(21556788)	+	(CACACA)n	Simple_repeat	1	75	(0)	3528116
17	31.7	2.0	4.0	chr6	149749714	149749812	(21056167)	+	(GCGGCG)n	Simple_repeat	1	101	(0)	3529085
17	16.3	0.0	0.0	chr6	150005252	150005286	(20800693)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3529502
19	21.4	0.0	0.0	chr6	150069234	150069278	(20736701)	+	(GCCCC)n	Simple_repeat	1	45	(0)	3529610
2509	14.5	5.5	2.8	chr6	150297024	150297722	(20508257)	+	LTR8B	LTR/ERV1	1	766	(54)	3529994
2433	14.4	2.4	0.0	chr6	150413699	150414064	(20391915)	C	MER66A	LTR/ERV1	(0)	478	104	3530177
3245	7.8	1.2	0.0	chr6	150414065	150414477	(20391502)	+	MLT2A1	LTR/ERVL	1	503	(52)	3530178
405	26.4	10.1	13.8	chr6	150518626	150518945	(20287034)	+	LTR79	LTR/ERVL	153	459	(68)	3530346
11	26.6	5.6	2.7	chr6	150599796	150599812	(20206167)	+	G-rich	Low_complexity	1	29	(46)	3530476
15	14.9	0.0	0.0	chr6	150599813	150599842	(20206137)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3530477
11	26.6	5.6	2.7	chr6	150599843	150599866	(20206113)	+	G-rich	Low_complexity	30	75	(0)	3530476
29	3.2	0.0	0.0	chr6	150599879	150599910	(20206069)	+	(GAGCCC)n	Simple_repeat	1	32	(0)	3530478
1505	19.3	6.7	6.9	chr6	150704709	150705097	(20100882)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	3530615
2348	11.0	0.0	0.0	chr6	150779345	150779645	(20026334)	C	AluSx1	SINE/Alu	(11)	301	1	3530730
2352	9.1	1.0	0.0	chr6	150779685	150779980	(20025999)	+	AluSc8	SINE/Alu	1	299	(12)	3530731
15	14.4	0.0	0.0	chr6	151240357	151240380	(19565599)	+	(T)n	Simple_repeat	1	24	(0)	3531640
645	18.7	7.3	0.6	chr6	152984425	152984591	(17821388)	C	MER96B	DNA/hAT-Tip100	(238)	179	1	3534291
32	21.5	5.6	3.0	chr6	154995190	154995314	(15810665)	+	G-rich	Low_complexity	1	132	(0)	3537437
1896	17.2	0.0	2.2	chr6	156984675	156984993	(13820986)	C	AluJb	SINE/Alu	(0)	312	1	3540271
2409	8.5	0.0	5.3	chr6	157855730	157856048	(12949931)	C	AluSq	SINE/Alu	(11)	302	1	3541593
47	0.0	0.0	0.0	chr6	157989428	157989467	(12816512)	+	(AT)n	Simple_repeat	1	40	(0)	3541784
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
313	30.7	1.9	1.0	chr6	158630842	158630943	(12175036)	C	MIRb	SINE/MIR	(27)	241	139	3542848
259	29.9	17.4	1.3	chr6	158631109	158631267	(12174712)	C	MIRc	SINE/MIR	(76)	192	3	3542849
19	25.5	1.1	6.6	chr6	158644770	158644859	(12161120)	+	(GCCCC)n	Simple_repeat	1	91	(0)	3542863
15	15.5	0.0	9.6	chr6	158818193	158818244	(11987735)	+	(CGCC)n	Simple_repeat	1	52	(0)	3543164
17	7.3	0.0	3.2	chr6	158818324	158818354	(11987625)	+	(GGGCC)n	Simple_repeat	1	31	(0)	3543165
1385	21.1	10.1	1.6	chr6	163579125	163579549	(7226430)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	1	3549641
15	0.0	0.0	5.0	chr6	165642018	165642037	(5163942)	+	(GT)n	Simple_repeat	1	20	(0)	3552202
13	10.0	0.0	0.0	chr6	165969250	165969271	(4836708)	+	(CTT)n	Simple_repeat	1	22	(0)	3552616
359	28.8	9.3	0.6	chr6	165969450	165969549	(4836430)	+	L1MC4	LINE/L1	6516	6618	(1424)	3552617
943	23.7	11.1	5.3	chr6	167494509	167494983	(3310996)	+	MLT2B4	LTR/ERVL	2	520	(0)	3554480
2538	11.5	1.9	0.6	chr6	168092888	168093246	(2712733)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3555126
1219	23.2	11.5	3.0	chr6	168230653	168231079	(2574900)	+	MER89	LTR/ERV1	2	469	(90)	3555288
2193	26.1	7.1	3.6	chr6	168231217	168231962	(2574017)	C	Charlie1a	DNA/hAT-Charlie	(654)	801	28	3555289
27	2.4	4.3	4.2	chr6	168637914	168637959	(2168020)	+	(GAGCTG)n	Simple_repeat	1	48	(0)	3555654
28	5.1	0.0	4.4	chr6	168638050	168638094	(2167885)	+	(CCCTG)n	Simple_repeat	1	45	(0)	3555655
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
290	33.8	8.4	7.5	chr6	170019300	170019593	(786386)	+	L2c	LINE/L2	3019	3315	(72)	3557067
203	20.2	3.2	0.2	chr7	451176	451641	(158894332)	+	(CT)n	Simple_repeat	1	481	(0)	3558364
281	26.2	3.8	6.0	chr7	538174	538307	(158807666)	C	L2a	LINE/L2	(158)	3217	3087	3558471
15	21.8	5.7	0.0	chr7	601610	601662	(158744311)	+	(GCCCT)n	Simple_repeat	1	56	(0)	3558558
1999	16.6	0.7	0.0	chr7	1029124	1029425	(158316548)	C	AluJr	SINE/Alu	(8)	304	1	3559195
23	23.2	3.2	4.2	chr7	1044451	1044543	(158301430)	+	G-rich	Low_complexity	1	96	(0)	3559213
2080	11.5	0.3	4.6	chr7	1075232	1075554	(158270419)	+	AluSg	SINE/Alu	1	309	(1)	3559238
258	31.2	2.1	0.0	chr7	1160610	1160702	(158185271)	C	L1MC4	LINE/L1	(17)	7978	7897	3559396
550	14.1	2.1	0.0	chr7	1160846	1160937	(158185036)	+	AluJo	SINE/Alu	51	144	(168)	3559397
483	16.7	0.0	3.6	chr7	1177080	1177163	(158168810)	C	AluJb	SINE/Alu	(5)	307	227	3559431
358	22.5	2.1	0.0	chr7	1294712	1295560	(158050413)	+	(GTGT)n	Simple_repeat	1	867	(0)	3559639
605	31.3	2.6	0.4	chr7	1758652	1758917	(157587056)	C	ERVL-int	LTR/ERVL	(1614)	4143	3872	3560433
598	30.9	10.0	4.9	chr7	1854807	1855859	(157490114)	C	MLT1A0-int	LTR/ERVL-MaLR	(240)	1131	5	3560575
359	28.1	9.7	0.4	chr7	2019411	2019592	(157326381)	+	MIRb	SINE/MIR	36	240	(22)	3560716
32	16.5	4.8	4.6	chr7	2019650	2019753	(157326220)	+	(CCACG)n	Simple_repeat	1	109	(0)	3560717
1051	18.3	0.0	0.0	chr7	2092256	2092419	(157253554)	C	AluJr	SINE/Alu	(9)	303	140	3560793
1207	23.1	4.9	0.2	chr7	2092558	2092900	(157253073)	C	L1MC3	LINE/L1	(2599)	5396	5039	3560791
648	17.9	5.1	4.7	chr7	2314817	2316847	(157029126)	+	(CACT)n	Simple_repeat	1	2135	(0)	3561121
13	17.4	0.0	2.9	chr7	2602651	2602684	(156743289)	+	(CTTCCC)n	Simple_repeat	1	34	(0)	3561712
218	36.8	2.5	4.1	chr7	2602692	2602813	(156743160)	C	L2c	LINE/L2	(2)	3385	3266	3561713
199	25.0	5.5	0.0	chr7	3066053	3066120	(156279853)	C	MIRb	SINE/MIR	(15)	253	182	3562596
421	12.8	6.5	0.0	chr7	5401620	5401705	(153944268)	C	MER58A	DNA/hAT-Charlie	(105)	119	28	3566939
190	36.2	8.0	1.4	chr7	5549231	5549370	(153796603)	+	L3	LINE/CR1	3867	4016	(83)	3567308
290	25.9	3.2	3.5	chr7	5555734	5555854	(153790119)	+	MIR3	SINE/MIR	63	185	(83)	3567327
279	31.3	3.9	0.0	chr7	5599396	5599494	(153746479)	+	MIRb	SINE/MIR	84	186	(82)	3567444
530	32.9	5.4	2.8	chr7	7270840	7271127	(152074846)	+	LTR81B	LTR/Gypsy	175	470	(923)	3570876
738	31.7	13.2	4.1	chr7	16203240	16203746	(143142227)	+	MLT1K	LTR/ERVL-MaLR	11	570	(25)	3582206
1042	22.8	7.7	3.5	chr7	17408188	17408704	(141937269)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	41	3583859
262	26.2	6.4	1.9	chr7	17408742	17408846	(141937127)	+	L1ME3E	LINE/L1	1812	1921	(5182)	3583857
13	13.0	5.6	2.6	chr7	20798416	20798451	(138547522)	+	(CTC)n	Simple_repeat	1	38	(0)	3588275
2275	9.8	2.2	0.7	chr7	23316398	23316704	(136029269)	+	AluSz	SINE/Alu	1	312	(0)	3592116
290	36.9	5.0	4.5	chr7	24166151	24166349	(135179624)	C	L2c	LINE/L2	(215)	3172	2973	3593459
780	17.1	0.0	0.0	chr7	24965727	24965843	(134380130)	C	AluJr	SINE/Alu	(188)	124	8	3594668
225	20.4	3.6	0.0	chr7	24965859	24965912	(134380061)	+	MER5A	DNA/hAT-Charlie	133	188	(1)	3594669
21	23.8	1.1	6.6	chr7	25180367	25180462	(134165511)	+	(GCCCC)n	Simple_repeat	1	90	(0)	3595066
23	14.1	4.3	5.5	chr7	25951373	25951442	(133394531)	+	G-rich	Low_complexity	1	73	(0)	3596156
18	28.9	2.2	3.3	chr7	27130798	27130886	(132215087)	+	(CCCCT)n	Simple_repeat	1	91	(0)	3598046
13	14.0	0.0	5.7	chr7	27130912	27130946	(132215027)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3598047
956	14.3	19.7	10.1	chr7	28224805	28225130	(131120843)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3599704
229	28.3	11.4	2.1	chr7	30513879	30514069	(128831904)	+	L2	LINE/L2	2538	2748	(671)	3603241
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
15	23.3	0.0	0.0	chr7	32957415	32957454	(126388519)	+	(GCGG)n	Simple_repeat	1	40	(0)	3607084
518	27.6	12.9	2.8	chr7	32958260	32958475	(126387498)	C	MIR	SINE/MIR	(10)	252	12	3607086
1023	15.5	0.0	0.0	chr7	32958515	32958669	(126387304)	+	FRAM	SINE/Alu	1	155	(21)	3607087
344	13.1	12.8	0.0	chr7	33109717	33109777	(126236196)	C	Ricksha_0	DNA/MULE-MuDR	(251)	1482	1413	3607379
1263	11.2	0.0	0.0	chr7	33109782	33109951	(126236022)	+	AluSx1	SINE/Alu	131	300	(12)	3607380
289	29.0	5.3	0.0	chr7	35623390	35623496	(123722477)	C	HAL1b	LINE/L1	(402)	2019	1907	3610968
18	15.8	8.6	1.6	chr7	36153193	36153250	(123192723)	+	(GCG)n	Simple_repeat	1	63	(0)	3611822
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
232	31.4	11.6	2.1	chr7	43926843	43926982	(115418991)	C	L2c	LINE/L2	(202)	3185	3031	3623463
22	13.4	0.0	0.0	chr7	44200737	44200770	(115145203)	+	(A)n	Simple_repeat	1	34	(0)	3623953
474	21.7	9.8	1.5	chr7	44639502	44639632	(114706341)	C	L1ME1	LINE/L1	(0)	6179	6037	3624581
12	21.9	3.9	3.8	chr7	44796964	44797014	(114548959)	+	(GCG)n	Simple_repeat	1	53	(0)	3624883
50	22.4	4.0	6.6	chr7	44885267	44885513	(114460460)	+	(CGC)n	Simple_repeat	1	257	(0)	3625085
12	18.8	2.6	2.6	chr7	44967052	44967089	(114378884)	+	G-rich	Low_complexity	1	39	(0)	3625261
346	34.1	8.2	3.9	chr7	44988110	44988266	(114357707)	C	MIRc	SINE/MIR	(16)	252	83	3625284
2345	8.4	0.3	2.6	chr7	44988267	44988576	(114357397)	+	AluSp	SINE/Alu	1	303	(10)	3625285
22	20.3	1.7	1.7	chr7	45088902	45088959	(114257014)	+	(CCGT)n	Simple_repeat	1	59	(0)	3625463
606	30.4	11.5	4.4	chr7	51260918	51261465	(108084508)	+	L2a	LINE/L2	2817	3426	(0)	3633396
17	28.2	5.2	0.0	chr7	55964833	55964909	(103381064)	+	G-rich	Low_complexity	1	81	(0)	3639596
2300	5.4	2.5	0.0	chr7	64306939	64307216	(95038757)	C	AluSc8	SINE/Alu	(17)	294	10	3646129
35	0.0	0.0	0.0	chr7	64307217	64307249	(95038724)	+	(CGCCCTGC)n	Simple_repeat	1	33	(0)	3646130
12	29.9	2.0	0.0	chr7	66629340	66629388	(92716585)	+	(CCCA)n	Simple_repeat	1	50	(0)	3650451
713	12.8	7.6	0.0	chr7	66629563	66629671	(92716302)	+	AluJr	SINE/Alu	1	118	(194)	3650452
18	20.1	0.0	4.1	chr7	73433790	73433838	(85912135)	+	(GCG)n	Simple_repeat	1	49	(0)	3664624
14	21.7	0.0	8.1	chr7	73557165	73557226	(85788747)	+	G-rich	Low_complexity	1	62	(0)	3664903
20	7.9	4.8	2.3	chr7	73647799	73647840	(85698133)	+	(GGGCGGC)n	Simple_repeat	1	44	(0)	3665148
408	26.3	4.2	0.9	chr7	73716020	73716134	(85629839)	+	MIR3	SINE/MIR	65	183	(25)	3665287
20	16.4	5.3	1.7	chr7	73719715	73719771	(85626202)	+	G-rich	Low_complexity	1	60	(0)	3665294
25	24.9	2.5	5.7	chr7	73719772	73719807	(85626166)	+	(CGGCC)n	Simple_repeat	53	124	(0)	3665293
2010	13.6	2.0	0.0	chr7	73719926	73720220	(85625753)	C	AluJr	SINE/Alu	(10)	302	2	3665295
270	31.7	7.7	0.0	chr7	73828247	73828366	(85517607)	+	MIRc	SINE/MIR	94	223	(45)	3665578
13	12.2	2.4	7.1	chr7	73986437	73986477	(85359496)	+	(GGCG)n	Simple_repeat	1	42	(0)	3665928
206	26.6	15.5	1.8	chr7	74430445	74430555	(84915418)	C	MIR1_Amn	SINE/MIR	(88)	142	14	3667073
2263	11.5	0.0	3.4	chr7	74430604	74430924	(84915049)	+	AluSx1	SINE/Alu	1	310	(2)	3667074
390	21.0	8.3	0.0	chr7	74479424	74479523	(84866450)	C	MamTip3	DNA/hAT-Tip100	(20)	480	372	3667191
254	25.5	8.9	7.3	chr7	74479551	74479715	(84866258)	+	L2c	LINE/L2	3062	3229	(158)	3667192
255	27.0	0.0	1.3	chr7	74495146	74495220	(84850753)	C	MER115	DNA/hAT-Tip100	(498)	195	122	3667232
254	37.1	2.6	2.6	chr7	74495349	74495539	(84850434)	+	L2c	LINE/L2	2968	3161	(226)	3667233
548	21.4	12.5	0.7	chr7	75649543	75649697	(83696276)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	3670146
18	19.4	0.0	6.7	chr7	75739213	75739272	(83606701)	+	(GGCGG)n	Simple_repeat	1	60	(0)	3670391
510	27.8	5.4	1.0	chr7	76996903	76999034	(82346939)	+	(GT)n	Simple_repeat	1	2247	(0)	3673081
16	19.3	0.0	4.4	chr7	77536973	77537017	(81808956)	+	G-rich	Low_complexity	1	45	(0)	3673969
4601	15.6	0.8	1.4	chr7	93119393	93120567	(66225406)	+	L1PBa1	LINE/L1	834	1985	(4878)	3694847
12425	10.4	0.7	1.6	chr7	94968696	94970632	(64375341)	C	L1PA7	LINE/L1	(4573)	1926	1	3697310
12	8.8	10.5	2.4	chr7	95772508	95772545	(63573428)	+	G-rich	Low_complexity	1	42	(0)	3698469
16	8.2	0.0	0.0	chr7	96303342	96303367	(63042606)	+	(TGGG)n	Simple_repeat	1	26	(0)	3699146
300	28.6	0.5	0.6	chr7	98242391	98243214	(61102759)	+	(CACC)n	Simple_repeat	1	828	(0)	3702153
12	23.8	2.2	2.1	chr7	98281281	98281326	(61064647)	+	(CCCGCC)n	Simple_repeat	1	47	(0)	3702253
2069	8.3	1.4	0.0	chr7	98773327	98773629	(60572344)	C	AluY	SINE/Alu	(0)	311	1	3703367
2597	11.7	1.8	15.1	chr7	98773630	98773816	(60572157)	C	MLT2A2	LTR/ERVL	(268)	185	4	3703366
1945	15.9	1.6	1.3	chr7	99210577	99210885	(60135088)	C	AluJo	SINE/Alu	(2)	310	1	3704196
2080	15.0	6.1	0.7	chr7	99366471	99366873	(59979100)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3704580
2046	9.2	1.3	2.6	chr7	99369227	99369531	(59976442)	+	AluSz	SINE/Alu	1	301	(11)	3704588
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
33	14.5	0.0	0.0	chr7	100167981	100168005	(59177968)	+	(GAGA)n	Simple_repeat	1	25	(0)	3706002
31	0.0	0.0	0.0	chr7	100168006	100168032	(59177941)	+	(AC)n	Simple_repeat	1	27	(0)	3706003
33	14.5	0.0	0.0	chr7	100168033	100168068	(59177905)	+	(GAGA)n	Simple_repeat	2	37	(0)	3706004
13	29.4	0.0	0.0	chr7	100435798	100435843	(58910130)	+	(GCCCGCC)n	Simple_repeat	1	46	(0)	3706569
12	18.3	0.0	3.0	chr7	100603022	100603054	(58742919)	+	(CTCC)n	Simple_repeat	1	33	(0)	3706931
1157	22.9	0.9	0.0	chr7	100624417	100624587	(58721386)	C	MER58A	DNA/hAT-Charlie	(4)	220	48	3706982
2205	11.2	0.0	2.8	chr7	101104543	101104863	(58241110)	C	AluSx1	SINE/Alu	(0)	312	1	3707999
15	27.6	0.0	4.5	chr7	101154651	101154716	(58191257)	+	G-rich	Low_complexity	1	66	(0)	3708122
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
190	33.3	0.0	0.0	chr7	101217552	101217611	(58128362)	C	MIR3	SINE/MIR	(49)	159	100	3708258
17	10.4	4.4	4.3	chr7	101232275	101232319	(58113654)	+	G-rich	Low_complexity	1	47	(0)	3708287
650	19.2	4.6	1.4	chr7	101234900	101235047	(58110926)	C	MER20	DNA/hAT-Charlie	(0)	219	67	3708293
1012	18.0	0.0	0.0	chr7	101240292	101240458	(58105515)	C	FRAM	SINE/Alu	(5)	171	5	3708299
2736	27.4	8.9	4.8	chr7	101308329	101309221	(58036752)	+	L1M2	LINE/L1	2	1495	(5621)	3708475
365	28.6	1.5	0.8	chr7	101352426	101352559	(57993414)	C	MER134	DNA?	(378)	135	1	3708592
1582	20.6	13.1	1.1	chr7	101381435	101381782	(57964191)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3708663
2153	20.5	6.1	2.1	chr7	101381783	101381862	(57964111)	C	MLT1D	LTR/ERVL-MaLR	(431)	74	1	3708662
16	15.9	0.0	0.0	chr7	101814087	101814114	(57531859)	+	(C)n	Simple_repeat	1	28	(0)	3709741
2408	9.7	0.0	0.3	chr7	102151271	102151580	(57194393)	+	AluSq2	SINE/Alu	1	309	(4)	3710416
1711	13.6	6.1	3.6	chr7	102456238	102456539	(56889434)	C	AluJr	SINE/Alu	(2)	310	1	3711049
1771	18.7	0.0	0.7	chr7	102992623	102992906	(56353067)	C	AluJb	SINE/Alu	(30)	282	1	3712056
14	27.2	3.5	0.0	chr7	103074995	103075051	(56270922)	+	(CGCCC)n	Simple_repeat	1	59	(0)	3712168
20984	9.0	3.0	1.2	chr7	103504466	103510637	(55835336)	+	L1PA7	LINE/L1	14	6333	(6)	3712836
13	11.5	7.5	2.3	chr7	104933766	104933805	(54412168)	+	G-rich	Low_complexity	1	43	(0)	3714853
21	0.0	0.0	0.0	chr7	105011850	105011872	(54334101)	+	(A)n	Simple_repeat	1	23	(0)	3715002
1961	9.4	2.9	1.1	chr7	105011876	105012142	(54333831)	+	AluSq	SINE/Alu	1	272	(41)	3715003
721	25.6	0.9	8.2	chr7	105270348	105270410	(54075563)	+	MIRb	SINE/MIR	22	72	(196)	3715425
2400	8.4	0.7	0.3	chr7	105270411	105270708	(54075265)	C	AluSq2	SINE/Alu	(14)	299	1	3715426
180	22.6	0.0	0.0	chr7	106047345	106047375	(53298598)	+	MIR3	SINE/MIR	63	93	(115)	3717012
711	15.2	2.2	2.2	chr7	106062913	106063047	(53282926)	C	LTR49	LTR/ERV1	(1)	594	460	3717039
2557	19.1	5.3	5.7	chr7	106083478	106084200	(53261773)	+	L1ME3Cz	LINE/L1	3	1214	(5419)	3717073
312	27.9	9.8	7.3	chr7	106285214	106285391	(53060582)	C	L1M4b	LINE/L1	(6487)	380	198	3717380
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
901	17.9	4.7	0.0	chr7	108028272	108028433	(51317540)	C	MER20	DNA/hAT-Charlie	(0)	219	50	3719992
17	17.9	2.7	7.9	chr7	108455746	108455819	(50890154)	+	(CGCCCCG)n	Simple_repeat	1	76	(0)	3720551
15	24.9	0.0	5.2	chr7	108456439	108456496	(50889477)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3720552
14	15.5	0.0	7.1	chr7	108456716	108456757	(50889216)	+	G-rich	Low_complexity	1	42	(0)	3720553
13	16.2	0.0	0.0	chr7	108526157	108526184	(50819789)	+	(CCCGC)n	Simple_repeat	1	28	(0)	3720663
26	10.3	7.6	2.8	chr7	108526347	108526412	(50819561)	+	(CGTG)n	Simple_repeat	1	71	(0)	3720664
359	31.8	3.8	0.8	chr7	112006100	112006226	(47339747)	+	MIRb	SINE/MIR	16	146	(122)	3725151
13	21.9	2.3	2.2	chr7	116524797	116524840	(42821133)	+	(CTCGCTG)n	Simple_repeat	1	45	(0)	3731164
1707	13.5	0.0	9.2	chr7	117272446	117272772	(42073201)	C	AluJr	SINE/Alu	(15)	297	1	3732318
16	7.4	0.0	6.1	chr7	124766199	124766231	(34579742)	+	(GGGTGG)n	Simple_repeat	1	33	(0)	3742265
1261	17.7	0.5	1.9	chr7	127393760	127393974	(31951999)	+	AluJo	SINE/Alu	1	212	(100)	3745669
2268	9.5	0.0	3.0	chr7	128149769	128150072	(31195901)	+	AluSz	SINE/Alu	1	295	(17)	3746698
12	24.2	2.5	0.0	chr7	128167315	128167354	(31178619)	+	(GCGTGT)n	Simple_repeat	1	41	(0)	3746728
2257	17.6	5.7	1.8	chr7	128172098	128172607	(31173366)	C	LTR53B	LTR/ERVL	(0)	533	3	3746731
419	10.0	1.6	0.0	chr7	128344082	128344141	(31001832)	+	U7	snRNA	2	62	(1)	3747039
33	25.2	5.8	1.4	chr7	128405902	128406040	(30939933)	+	(CGCGGC)n	Simple_repeat	1	147	(0)	3747156
322	34.2	2.4	6.6	chr7	128903089	128903463	(30442510)	+	L2b	LINE/L2	2953	3320	(67)	3748119
202	36.5	11.7	0.0	chr7	129498042	129498200	(29847773)	C	L2c	LINE/L2	(562)	2857	2678	3749247
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
16	24.7	0.0	0.0	chr7	129825231	129825265	(29520708)	+	(TC)n	Simple_repeat	1	35	(0)	3749924
16	17.1	0.0	4.7	chr7	129825841	129825883	(29520090)	+	(CCGCC)n	Simple_repeat	1	43	(0)	3749925
840	7.1	2.2	13.6	chr7	130205843	130205996	(29139977)	C	AluSz	SINE/Alu	(176)	136	1	3750765
5950	17.4	2.5	0.1	chr7	130231525	130232476	(29113497)	C	LTR1D	LTR/ERV1	(0)	975	1	3750816
2338	10.6	11.7	2.1	chr7	130232477	130232564	(29113409)	C	MSTA	LTR/ERVL-MaLR	(339)	89	2	3750815
18	25.3	1.7	1.7	chr7	131110039	131110096	(28235877)	+	GA-rich	Low_complexity	1	59	(0)	3752139
742	24.6	5.9	1.0	chr7	132112432	132112727	(27233246)	+	MER5C	DNA/hAT-Charlie	2	313	(0)	3753944
4842	11.7	5.2	4.1	chr7	132733947	132734772	(26611201)	+	LTR1A2	LTR/ERV1	3	837	(0)	3754857
2029	12.7	6.8	1.1	chr7	132882858	132883216	(26462757)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3755063
2079	16.4	3.8	3.6	chr7	133693013	133693559	(25652414)	C	MLT2A2	LTR/ERVL	(0)	554	1	3756321
328	17.1	7.9	3.5	chr7	134290417	134290501	(25055472)	C	L2c	LINE/L2	(0)	3387	3299	3757228
1629	27.4	6.1	3.9	chr7	134547175	134547687	(24798286)	+	HERVI-int	LTR/ERV1	450	974	(6763)	3757671
3134	25.3	0.3	0.5	chr7	134547812	134548478	(24797495)	+	HERVI-int	LTR/ERV1	3833	4498	(3239)	3757671
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
281	26.9	16.3	0.0	chr7	139094692	139094840	(20251133)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3764907
228	20.3	6.6	1.9	chr7	139703653	139704639	(19641334)	+	(AC)n	Simple_repeat	1	1033	(0)	3766062
839	19.3	0.0	0.7	chr7	140452415	140452554	(18893419)	C	AluSx	SINE/Alu	(39)	273	135	3767481
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
2297	9.2	1.0	0.0	chr7	140669752	140670043	(18675930)	C	AluSp	SINE/Alu	(18)	295	1	3767986
2168	9.0	1.6	0.3	chr7	149149230	149149528	(10196445)	C	AluSc8	SINE/Alu	(8)	303	1	3780157
983	15.1	7.9	2.1	chr7	149149529	149149554	(10196419)	C	MER33	DNA/hAT-Charlie	(162)	162	133	3780153
1628	16.8	2.7	3.0	chr7	149149555	149149852	(10196121)	+	AluJr	SINE/Alu	1	297	(15)	3780158
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
16	13.4	0.0	2.9	chr7	149714673	149714707	(9631266)	+	G-rich	Low_complexity	1	35	(0)	3781084
1159	19.6	3.2	0.0	chr7	149717192	149717431	(9628542)	C	MER68B	LTR/ERVL	(316)	248	1	3781088
95	2.3	0.0	0.0	chr7	150978892	150978981	(8366992)	+	(AC)n	Simple_repeat	1	90	(0)	3782735
521	32.1	4.2	6.1	chr7	151080096	151080340	(8265633)	C	MIRc	SINE/MIR	(0)	268	14	3782869
24	15.5	0.0	0.0	chr7	151126346	151126390	(8219583)	+	(GGAGC)n	Simple_repeat	1	45	(0)	3782947
58	0.0	0.0	0.0	chr7	151126413	151126465	(8219508)	+	(AGGCTGGGAG)n	Simple_repeat	1	53	(0)	3782948
29	10.1	3.6	1.8	chr7	151341712	151341766	(8004207)	+	(GCG)n	Simple_repeat	1	57	(0)	3783281
61	0.0	0.0	0.0	chr7	151875563	151875614	(7470359)	+	(GT)n	Simple_repeat	1	52	(0)	3784164
18	23.4	4.0	3.9	chr7	151877458	151877532	(7468441)	+	(CGC)n	Simple_repeat	1	78	(0)	3784167
957	24.3	14.4	15.8	chr7	152520832	152521251	(6824722)	+	MER67A	LTR/ERV1	1	408	(135)	3785349
2308	9.4	0.0	1.7	chr7	152521252	152521549	(6824424)	+	AluSg	SINE/Alu	2	294	(16)	3785350
634	27.9	6.4	2.1	chr7	154928747	154929139	(4416834)	C	LTR48	LTR/ERV1	(296)	491	1	3788921
1948	16.4	0.3	1.3	chr7	154929154	154929464	(4416509)	+	AluJr	SINE/Alu	1	308	(4)	3788922
16	26.6	1.7	1.6	chr7	155297434	155297493	(4048480)	+	G-rich	Low_complexity	1	61	(0)	3789476
3936	10.7	7.7	0.1	chr7	155590743	155591362	(3754611)	C	LTR1C	LTR/ERV1	(0)	747	1	3789844
348	26.3	7.1	7.6	chr7	155591363	155591543	(3754430)	+	MER89	LTR/ERV1	326	505	(54)	3789843
275	25.3	21.8	3.8	chr7	155714542	155714779	(3631194)	C	L2a	LINE/L2	(2784)	635	343	3790026
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
13	26.4	1.9	1.9	chr7	156893315	156893366	(2452607)	+	G-rich	Low_complexity	1	53	(0)	3791500
17	15.1	4.3	2.1	chr7	156999765	156999810	(2346163)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3791690
370	25.7	12.5	5.6	chr7	157432481	157432822	(1913151)	+	MLT1D	LTR/ERVL-MaLR	12	380	(125)	3792471
375	21.6	5.8	1.0	chr7	158864156	158864253	(481720)	C	LTR56	LTR/ERV1	(342)	103	1	3793810
825	20.2	0.5	5.5	chr7	158975450	158975648	(370325)	C	LOR1a	LTR/ERV1	(0)	497	309	3793976
1229	20.7	5.7	2.8	chr7	158975793	158975900	(370073)	+	L1MC1	LINE/L1	5992	6101	(232)	3793977
15	36.1	1.5	1.5	chr7	159027739	159027803	(318170)	+	(CA)n	Simple_repeat	1	66	(0)	3794016
2026	10.4	0.6	5.8	chr7	159039178	159039503	(306470)	+	AluSz	SINE/Alu	2	310	(2)	3794023
396	19.1	23.9	2.2	chr7	159039523	159039687	(306286)	+	MLT1A0	LTR/ERVL-MaLR	1	201	(164)	3794024
261	15.0	15.5	0.0	chr7	159039689	159039748	(306225)	+	MLT1A0	LTR/ERVL-MaLR	278	348	(60)	3794024
32	22.7	0.0	6.8	chr8	688255	688371	(144450265)	+	(CCCCG)n	Simple_repeat	1	117	(0)	3795081
489	24.7	3.7	6.5	chr8	6608799	6608967	(138529669)	C	MER5B	DNA/hAT-Charlie	(6)	172	9	3802321
2741	13.4	4.8	0.2	chr8	9577736	9578175	(135560461)	C	MSTA-int	LTR/ERVL-MaLR	(4)	1627	1167	3806755
1660	20.5	0.0	1.6	chr8	9828471	9828605	(135310031)	C	AluJb	SINE/Alu	(177)	135	1	3807101
975	20.5	4.6	5.7	chr8	9828606	9828639	(135309997)	C	MIR	SINE/MIR	(235)	27	2	3807100
327	23.7	13.2	1.5	chr8	9828821	9828953	(135309683)	+	MIRb	SINE/MIR	57	207	(61)	3807103
18	18.9	4.2	0.0	chr8	9933877	9933924	(135204712)	+	(GCCTC)n	Simple_repeat	1	50	(0)	3807297
528	24.4	3.0	0.0	chr8	10055281	10055411	(135083225)	C	MER5C1	DNA/hAT-Charlie	(50)	213	79	3807510
594	20.6	15.3	2.4	chr8	10055468	10055631	(135083005)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3807511
265	24.5	8.7	0.0	chr8	11448812	11448905	(133689731)	+	MIR3	SINE/MIR	41	143	(65)	3809609
2425	9.9	0.0	0.6	chr8	11473861	11474174	(133664462)	C	AluSx	SINE/Alu	(0)	312	1	3809639
317	24.2	1.5	0.0	chr8	11589607	11589672	(133548964)	C	MER91B	DNA/hAT-Tip100	(35)	155	89	3809838
326	25.0	1.2	2.3	chr8	11736324	11736409	(133402227)	C	MIR3	SINE/MIR	(34)	174	90	3810076
5774	20.1	5.1	3.4	chr8	11986436	11989764	(133148872)	+	L1PBa	LINE/L1	657	3112	(3803)	3810506
1527	23.8	14.3	0.9	chr8	12972063	12972715	(132165921)	C	LTR50	LTR/ERVL	(33)	762	3	3811917
2078	18.1	0.3	0.3	chr8	12972810	12973192	(132165444)	C	L1MB3	LINE/L1	(2)	6181	5799	3811918
1592	28.3	8.9	2.5	chr8	13114721	13115391	(132023245)	+	L1ME3F	LINE/L1	5356	6073	(170)	3812166
10970	9.4	0.9	0.9	chr8	13473469	13474957	(131663679)	+	THE1B-int	LTR/ERVL-MaLR	1	1489	(91)	3812744
20	19.1	3.1	4.5	chr8	17157071	17157135	(127981501)	+	(CGC)n	Simple_repeat	1	67	(0)	3817789
13	10.5	6.5	0.0	chr8	17497022	17497052	(127641584)	+	(CCGCC)n	Simple_repeat	1	33	(0)	3818285
19	17.1	1.7	5.1	chr8	17801486	17801543	(127337093)	+	(CGCTCC)n	Simple_repeat	1	59	(0)	3818737
625	25.6	9.6	10.4	chr8	18917645	18917902	(126220734)	+	MLT1J	LTR/ERVL-MaLR	205	461	(51)	3820317
15	10.7	3.3	0.0	chr8	19313633	19313662	(125824974)	+	(GGGCG)n	Simple_repeat	1	31	(0)	3821016
12	4.1	3.5	6.7	chr8	21757220	21757248	(123381388)	+	(GCCCA)n	Simple_repeat	1	30	(0)	3824955
304	27.9	6.2	2.9	chr8	21795209	21795348	(123343288)	C	MIRc	SINE/MIR	(6)	262	118	3825017
1055	16.2	0.6	0.6	chr8	22030693	22030865	(123107771)	C	AluJr	SINE/Alu	(25)	287	115	3825464
797	28.4	5.4	11.4	chr8	22030876	22031427	(123107209)	C	L1MEd	LINE/L1	(6301)	802	286	3825454
1791	15.8	0.3	3.5	chr8	22088716	22089025	(123049611)	+	AluJr	SINE/Alu	13	312	(0)	3825567
306	29.2	9.2	5.0	chr8	22114154	22114456	(123024180)	+	L1ME4c	LINE/L1	513	829	(1)	3825605
356	34.4	2.7	12.0	chr8	22167199	22167522	(122971114)	C	L2c	LINE/L2	(2)	3385	3093	3825678
2575	7.3	0.0	0.0	chr8	22185823	22186135	(122952501)	C	AluSq2	SINE/Alu	(0)	313	1	3825713
12	16.4	9.5	0.0	chr8	22229511	22229552	(122909084)	+	(CTGGCT)n	Simple_repeat	1	46	(0)	3825795
17	26.7	0.0	0.0	chr8	22230622	22230662	(122907974)	+	(AC)n	Simple_repeat	1	41	(0)	3825797
12	17.5	7.9	4.4	chr8	22561396	22561458	(122577178)	+	(GCCTGC)n	Simple_repeat	1	68	(0)	3826467
27	6.1	0.0	0.0	chr8	22865357	22865391	(122273245)	+	(GGCGGT)n	Simple_repeat	1	35	(0)	3826943
762	31.7	9.2	3.0	chr8	25195391	25195922	(119942714)	+	L2b	LINE/L2	2779	3375	(0)	3830679
334	29.2	3.7	3.7	chr8	25948893	25949027	(119189609)	+	Charlie23a	DNA/hAT-Charlie	20	154	(185)	3831861
17	19.8	3.2	4.6	chr8	26291426	26291488	(118847148)	+	(CCGCC)n	Simple_repeat	1	65	(0)	3832499
216	27.2	11.0	2.4	chr8	26451355	26451437	(118687199)	+	MIR1_Amn	SINE/MIR	75	165	(65)	3832763
25	23.1	3.3	3.2	chr8	26513914	26514004	(118624632)	+	(CCCTC)n	Simple_repeat	1	94	(0)	3832884
35	0.0	5.4	0.0	chr8	26577982	26578018	(118560618)	+	(TC)n	Simple_repeat	1	39	(0)	3832986
2771	9.7	3.8	13.9	chr8	27223154	27223656	(117914980)	+	MLT2A2	LTR/ERVL	1	450	(3)	3834001
3795	18.9	5.8	6.5	chr8	27319870	27319986	(117818650)	C	MER21B	LTR/ERVL	(5)	863	730	3834180
2436	11.6	1.5	0.0	chr8	27319987	27320322	(117818314)	+	MER61A	LTR/ERV1	1	341	(0)	3834181
249	32.6	8.4	10.8	chr8	27332899	27333287	(117805349)	C	L2a	LINE/L2	(98)	3328	2928	3834202
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
997	18.2	0.6	0.0	chr8	27636290	27636448	(117502188)	+	AluJr	SINE/Alu	136	295	(17)	3834714
1672	11.2	9.7	1.8	chr8	27873354	27873707	(117264929)	+	LTR7	LTR/ERV1	1	426	(38)	3835141
638	26.7	14.7	2.2	chr8	27939694	27939919	(117198717)	C	MIRb	SINE/MIR	(8)	260	2	3835248
1532	16.4	8.2	1.2	chr8	27976959	27977297	(117161339)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3835319
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
1558	13.2	9.0	5.5	chr8	29007537	29007825	(116130811)	+	AluJb	SINE/Alu	1	300	(12)	3837220
14	8.5	10.3	2.3	chr8	29348857	29348895	(115789741)	+	(GCG)n	Simple_repeat	1	43	(0)	3837753
1574	27.2	12.0	12.5	chr8	29812120	29812989	(115325647)	+	MER45C	DNA/hAT-Tip100	89	953	(0)	3838542
225	31.8	2.2	0.0	chr8	30113318	30113405	(115025231)	+	HAL1ME	LINE/L1	117	206	(2259)	3839065
15	0.0	0.0	0.0	chr8	30156938	30156954	(114981682)	+	(AC)n	Simple_repeat	1	17	(0)	3839162
3127	15.9	3.2	5.1	chr8	30156958	30157588	(114981048)	C	L1PB4	LINE/L1	(12)	6144	5526	3839163
2023	17.5	0.0	2.8	chr8	37216335	37216692	(107921944)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	3850001
253	32.3	5.8	3.6	chr8	37216787	37216953	(107921683)	C	L2b	LINE/L2	(306)	3081	2911	3850002
21	16.8	0.0	0.0	chr8	37359475	37359509	(107779127)	+	A-rich	Low_complexity	1	35	(0)	3850195
1792	18.8	1.0	0.3	chr8	37585665	37585972	(107552664)	C	AluJr	SINE/Alu	(0)	312	3	3850573
33	0.0	0.0	0.0	chr8	37695353	37695383	(107443253)	+	(CCCAC)n	Simple_repeat	1	31	(0)	3850802
13	18.8	2.6	2.6	chr8	37695584	37695621	(107443015)	+	(GCG)n	Simple_repeat	1	39	(0)	3850803
28	8.2	5.8	0.0	chr8	37726887	37726955	(107411681)	+	(GGGAA)n	Simple_repeat	1	72	(0)	3850870
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
713	31.1	1.4	1.9	chr8	37785843	37786058	(107352578)	+	MIR	SINE/MIR	29	243	(19)	3850963
29	0.0	0.0	0.0	chr8	37822385	37822409	(107316227)	+	(AC)n	Simple_repeat	1	25	(0)	3851043
4147	16.1	5.0	3.5	chr8	37822439	37822892	(107315744)	C	L1MB7	LINE/L1	(9)	6175	5738	3851044
244	32.4	1.0	1.9	chr8	37830248	37830351	(107308285)	C	MIRc	SINE/MIR	(33)	235	133	3851057
299	28.2	15.3	2.6	chr8	37830358	37830528	(107308108)	C	X7A_LINE	LINE/CR1	(6)	244	50	3851058
31	3.0	0.0	0.0	chr8	37899609	37899642	(107238994)	+	(CGCCC)n	Simple_repeat	1	34	(0)	3851171
14	22.6	2.1	2.0	chr8	37964360	37964407	(107174229)	+	(CCACC)n	Simple_repeat	1	49	(0)	3851322
13	12.7	0.0	0.0	chr8	38231750	38231775	(106906861)	+	(CCGCC)n	Simple_repeat	1	26	(0)	3851937
354	34.9	8.7	5.9	chr8	38397384	38397816	(106740820)	C	L2b	LINE/L2	(230)	3145	2698	3852226
13	14.7	2.3	6.8	chr8	38413437	38413479	(106725157)	+	(AGGTG)n	Simple_repeat	1	44	(0)	3852246
14	13.6	4.5	4.3	chr8	38557508	38557551	(106581085)	+	G-rich	Low_complexity	1	46	(0)	3852530
645	26.9	9.5	4.1	chr8	40974348	40974780	(104163856)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	8	3856204
12	17.4	2.9	2.8	chr8	41577974	41578008	(103560628)	+	(GCCCC)n	Simple_repeat	1	36	(0)	3857273
13	19.8	0.0	6.5	chr8	41828226	41828271	(103310365)	+	(CCCCG)n	Simple_repeat	1	46	(0)	3857668
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
16	14.0	2.3	4.5	chr8	47132794	47132836	(98005800)	+	(GCCCAC)n	Simple_repeat	1	44	(0)	3861503
14	9.2	8.6	0.0	chr8	47941253	47941287	(97197349)	+	(TCCTCTC)n	Simple_repeat	1	38	(0)	3862628
1235	23.8	13.9	0.0	chr8	47941312	47941694	(97196942)	+	MER77B	LTR/ERVL	101	545	(155)	3862629
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
4655	13.9	5.3	4.2	chr8	48896971	48897760	(96240876)	C	LTR1A1	LTR/ERV1	(0)	799	1	3863808
15107	22.4	4.7	2.2	chr8	52396841	52403794	(92734842)	C	L1MA9	LINE/L1	(520)	7211	401	3868094
187	29.3	3.5	0.0	chr8	52941005	52941086	(92197550)	+	MER5A	DNA/hAT-Charlie	74	158	(31)	3868909
15	10.0	6.2	0.0	chr8	52941151	52941182	(92197454)	+	GA-rich	Low_complexity	1	34	(0)	3868910
1688	7.5	1.9	0.0	chr8	54135611	54135822	(91002814)	C	AluSg	SINE/Alu	(94)	216	1	3870575
14965	9.8	2.9	1.7	chr8	60155829	60160361	(84978275)	+	L1PBa1	LINE/L1	380	5004	(1858)	3878747
25	21.4	6.3	2.0	chr8	60516807	60516901	(84621735)	+	G-rich	Low_complexity	1	101	(0)	3879292
28	0.0	0.0	0.0	chr8	60912801	60912827	(84225809)	+	(T)n	Simple_repeat	1	27	(0)	3879876
14	15.6	5.6	0.0	chr8	66667191	66667226	(78471410)	+	(CACT)n	Simple_repeat	1	38	(0)	3887826
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
2045	13.3	0.3	0.3	chr8	73302404	73302704	(71835932)	+	AluJo	SINE/Alu	1	301	(11)	3897766
7003	11.6	2.3	2.9	chr8	73887606	73888431	(71250205)	+	L1MA5A	LINE/L1	5280	6116	(181)	3898728
4252	13.4	1.0	6.5	chr8	73888447	73889069	(71249567)	+	MER50	LTR/ERV1	17	613	(121)	3898731
12	20.2	0.0	6.7	chr8	78665979	78666023	(66472613)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	3904970
17	10.3	0.0	3.0	chr8	79767998	79768030	(65370606)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	3906480
337	27.9	0.9	0.9	chr8	80084258	80084362	(65054274)	+	MLT1K	LTR/ERVL-MaLR	131	235	(360)	3906983
906	24.8	12.4	4.8	chr8	80110619	80110923	(65027713)	+	MER57E1	LTR/ERV1	5	335	(37)	3907037
2051	17.0	0.0	1.9	chr8	80110924	80111240	(65027396)	+	AluJr	SINE/Alu	1	311	(1)	3907039
566	27.5	0.0	6.2	chr8	80412442	80412541	(64726095)	+	Arthur1A	DNA/hAT-Tip100	11	110	(67)	3907725
458	34.4	11.0	6.3	chr8	81259546	81260200	(63878436)	C	L2	LINE/L2	(787)	2632	1943	3909026
423	28.8	11.4	1.7	chr8	81260201	81260437	(63878199)	+	LTR16C	LTR/ERVL	1	263	(226)	3909027
2869	8.8	2.4	13.8	chr8	81587731	81588243	(63550393)	C	MLT2A2	LTR/ERVL	(0)	453	1	3909467
6884	12.9	4.4	4.3	chr8	81588244	81588388	(63550248)	C	L1PA15	LINE/L1	(1883)	4263	4119	3909466
18	16.0	0.0	0.0	chr8	85107298	85107332	(60031304)	+	(GGC)n	Simple_repeat	1	35	(0)	3914051
260	29.1	8.6	3.0	chr8	85524590	85524720	(59613916)	+	MLT1L	LTR/ERVL-MaLR	300	438	(172)	3914701
211	26.9	4.3	1.5	chr8	94198726	94198793	(50939843)	+	L2a	LINE/L2	3351	3420	(6)	3926449
15	31.6	0.0	1.6	chr8	95133656	95133719	(50004917)	+	G-rich	Low_complexity	1	64	(0)	3928263
18	29.8	1.8	0.0	chr8	95133723	95133779	(50004857)	+	(GC)n	Simple_repeat	1	58	(0)	3928264
35	0.0	0.0	0.0	chr8	101097838	101097867	(44040769)	+	(GA)n	Simple_repeat	1	30	(0)	3938140
21	22.1	0.0	1.8	chr8	102655972	102656027	(42482609)	+	(CGCCCCC)n	Simple_repeat	1	56	(0)	3940829
12	12.0	3.7	0.0	chr8	102656127	102656153	(42482483)	+	(CCGCT)n	Simple_repeat	1	28	(0)	3940830
19	15.2	8.7	2.7	chr8	103020989	103021057	(42117579)	+	(CGGCAG)n	Simple_repeat	1	75	(0)	3941612
418	31.1	2.9	5.7	chr8	104793522	104793732	(40344904)	+	MIRb	SINE/MIR	6	210	(58)	3944269
14	9.6	0.0	0.0	chr8	109644792	109644814	(35493822)	+	(CGC)n	Simple_repeat	1	23	(0)	3951139
11	24.2	5.5	1.7	chr8	120125125	120125179	(25013457)	+	(CAGCGG)n	Simple_repeat	1	58	(0)	3966127
2139	15.4	0.9	0.3	chr8	125384467	125384805	(19753831)	C	MER61A	LTR/ERV1	(0)	341	1	3975464
600	32.3	2.3	4.5	chr8	125422393	125422658	(19715978)	+	MER115	DNA/hAT-Tip100	111	370	(323)	3975560
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
885	21.0	7.0	1.5	chr8	127895770	127895972	(17242664)	C	MER58A	DNA/hAT-Charlie	(1)	223	9	3980347
14	18.4	4.4	2.1	chr8	133297284	133297328	(11841308)	+	(GCGCCCC)n	Simple_repeat	1	47	(0)	3990150
12	19.4	4.7	2.2	chr8	133297384	133297426	(11841210)	+	G-rich	Low_complexity	1	45	(0)	3990151
17	17.6	4.4	0.0	chr8	133297583	133297627	(11841009)	+	(GTGTGC)n	Simple_repeat	1	47	(0)	3990152
11	3.1	14.3	2.5	chr8	133375574	133375608	(11763028)	+	(GAAGGCT)n	Simple_repeat	1	40	(0)	3990318
11	18.1	2.4	4.8	chr8	134713228	134713268	(10425368)	+	(TCCGGAG)n	Simple_repeat	1	42	(0)	3992734
251	28.7	4.4	6.9	chr8	134713321	134713436	(10425200)	+	MIRc	SINE/MIR	28	140	(128)	3992735
454	32.8	4.2	1.0	chr8	139741250	139741468	(5397168)	C	MIR	SINE/MIR	(0)	262	43	4000828
22	18.0	1.7	3.3	chr8	141001077	141001144	(4137492)	+	(GCCCCGC)n	Simple_repeat	1	66	(0)	4002963
940	18.4	0.0	3.1	chr8	141277918	141278080	(3860556)	C	AluJr4	SINE/Alu	(22)	290	133	4003411
345	27.4	1.0	0.0	chr8	141575642	141575736	(3562900)	+	MIR3	SINE/MIR	87	182	(26)	4003833
17	15.0	4.3	2.1	chr8	141575770	141575815	(3562821)	+	(CCCTG)n	Simple_repeat	1	48	(0)	4003834
293	20.6	3.5	2.5	chr8	142007950	142008758	(3129878)	+	(AC)n	Simple_repeat	1	837	(0)	4004409
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
205	22.4	13.3	3.4	chr8	142683423	142683510	(2455126)	C	MIRb	SINE/MIR	(121)	147	50	4005180
235	24.6	1.7	0.0	chr8	143218543	143218599	(1920037)	C	MIRc	SINE/MIR	(168)	100	43	4005922
13	13.5	6.1	0.0	chr8	143289453	143289485	(1849151)	+	(GAGGCC)n	Simple_repeat	1	35	(0)	4006023
11	25.2	2.0	3.9	chr8	143289486	143289502	(1849134)	+	G-rich	Low_complexity	2	52	(0)	4006024
13	18.5	0.0	0.0	chr8	143489943	143489973	(1648663)	+	(GTCCCT)n	Simple_repeat	1	31	(0)	4006268
24	18.1	1.5	4.3	chr8	143840756	143840823	(1297813)	+	(CGCTCC)n	Simple_repeat	1	69	(0)	4006731
12	17.6	3.1	0.0	chr8	143840799	143840830	(1297806)	+	(CCGGCG)n	Simple_repeat	1	33	(0)	4006732
16	18.8	1.9	5.5	chr8	143840975	143841028	(1297608)	+	G-rich	Low_complexity	1	55	(0)	4006733
12	14.7	3.3	0.0	chr8	143873774	143873803	(1264833)	+	(GCCCCA)n	Simple_repeat	1	31	(0)	4006782
18	22.3	1.2	8.1	chr8	143878439	143878489	(1260147)	+	(CGCC)n	Simple_repeat	1	47	(0)	4006792
13	22.5	0.0	7.4	chr8	143878550	143878603	(1260033)	+	G-rich	Low_complexity	1	54	(0)	4006793
27	0.0	3.5	0.0	chr8	143933868	143933896	(1204740)	+	(TGCCCC)n	Simple_repeat	1	30	(0)	4006858
12	31.8	1.7	1.6	chr8	143952948	143953007	(1185629)	+	(CCCGC)n	Simple_repeat	1	61	(0)	4006871
2220	19.0	7.0	0.8	chr8	143995654	143996178	(1142458)	+	MER90a	LTR/ERV1	29	588	(26)	4006929
732	25.2	12.7	3.0	chr8	144220860	144221397	(917239)	C	MER77	LTR/ERVL	(30)	670	54	4007334
13	13.1	0.0	0.0	chr8	144334302	144334327	(804309)	+	(GGGAG)n	Simple_repeat	1	26	(0)	4007461
12	11.9	0.0	6.5	chr8	144334462	144334492	(804144)	+	(CTCC)n	Simple_repeat	1	31	(0)	4007462
13	16.1	0.0	0.0	chr8	144338143	144338170	(800466)	+	(CGCCC)n	Simple_repeat	1	28	(0)	4007469
533	28.3	13.6	0.3	chr8	144343454	144343779	(794857)	+	LTR16A	LTR/ERVL	60	435	(16)	4007480
3136	13.4	1.5	7.8	chr8	144369497	144369696	(768940)	C	LTR27B	LTR/ERV1	(400)	194	1	4007526
1526	18.0	2.8	1.1	chr8	144369717	144369805	(768831)	+	AluJr	SINE/Alu	12	106	(206)	4007529
2557	6.8	0.3	0.0	chr8	144369806	144370115	(768521)	+	AluSp	SINE/Alu	1	311	(2)	4007530
14	14.3	2.4	4.7	chr8	144413515	144413556	(725080)	+	G-rich	Low_complexity	1	43	(0)	4007597
13	14.2	3.2	0.0	chr8	144423484	144423514	(715122)	+	G-rich	Low_complexity	1	32	(0)	4007611
13	30.2	0.0	0.0	chr8	144467711	144467755	(670881)	+	(CAG)n	Simple_repeat	1	45	(0)	4007646
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
16	9.5	5.9	0.0	chr8	144501090	144501123	(637513)	+	(CTCTCCT)n	Simple_repeat	1	36	(0)	4007692
37184	19.1	1.2	2.1	chr9	6080644	6087331	(132307386)	+	HERVI-int	LTR/ERV1	1144	7769	(16)	4017508
4678	12.3	2.9	4.5	chr9	14007350	14008193	(124386524)	+	LTR1A2	LTR/ERV1	7	836	(1)	4028388
360	22.6	4.9	17.0	chr9	15427762	15427881	(122966836)	+	L1MC4a	LINE/L1	545	646	(5569)	4030529
1916	10.7	0.0	0.0	chr9	15427882	15428133	(122966584)	+	AluSz	SINE/Alu	54	305	(7)	4030530
774	16.2	1.2	0.1	chr9	19241727	19241862	(119152855)	+	FLAM_C	SINE/Alu	10	211	(90)	4035950
679	17.0	0.0	0.0	chr9	19241909	19242008	(119152709)	+	AluJo	SINE/Alu	1	100	(212)	4035951
3079	19.5	2.8	1.6	chr9	19242009	19242645	(119152072)	C	L1MC3	LINE/L1	(1708)	6077	5433	4035952
16	13.1	0.0	0.0	chr9	21802470	21802494	(116592223)	+	(A)n	Simple_repeat	1	25	(0)	4039727
2472	5.3	1.6	0.3	chr9	33076868	33077171	(105317546)	+	AluSp	SINE/Alu	2	309	(4)	4054715
16	28.3	0.0	3.2	chr9	33167352	33167414	(105227303)	+	(GAGGCG)n	Simple_repeat	1	63	(0)	4054861
13	19.1	0.0	8.2	chr9	33289762	33289810	(105104907)	+	(CCCTC)n	Simple_repeat	1	49	(0)	4055137
15	17.1	0.0	0.0	chr9	33437278	33437310	(104957407)	+	(CCCCA)n	Simple_repeat	1	33	(0)	4055440
13	15.4	5.6	0.0	chr9	34612149	34612184	(103782533)	+	G-rich	Low_complexity	1	38	(0)	4057680
248	35.5	11.8	4.4	chr9	34637992	34638404	(103756313)	C	L2c	LINE/L2	(27)	3360	2913	4057711
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
893	30.0	5.2	5.4	chr9	36530474	36530935	(101863782)	+	MLT1K	LTR/ERVL-MaLR	125	585	(10)	4060880
1494	22.6	12.7	1.4	chr9	36530940	36531365	(101863352)	+	MLT1G3	LTR/ERVL-MaLR	7	487	(108)	4060881
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
193	27.2	12.6	0.0	chr9	69200146	69200270	(69194447)	+	L2b	LINE/L2	2972	3114	(261)	4081219
26	0.0	0.0	0.0	chr9	70412187	70412214	(67982503)	+	(A)n	Simple_repeat	1	28	(0)	4083101
18	17.2	0.0	5.9	chr9	76394543	76394593	(62000124)	+	(GCCCC)n	Simple_repeat	1	51	(0)	4092455
884	20.9	32.6	0.9	chr9	76456068	76456608	(61938109)	+	LTR50	LTR/ERVL	1	795	(0)	4092587
2247	20.9	3.5	1.1	chr9	84947256	84947423	(53447294)	C	MLT1D	LTR/ERVL-MaLR	(302)	203	26	4105498
235	27.2	7.9	5.0	chr9	84947471	84947629	(53447088)	C	L2c	LINE/L2	(314)	3073	2910	4105497
29	0.0	0.0	0.0	chr9	85213097	85213121	(53181596)	+	(CA)n	Simple_repeat	1	25	(0)	4105897
13	17.6	2.4	4.7	chr9	85742036	85742077	(52652640)	+	G-rich	Low_complexity	1	43	(0)	4106657
2079	20.6	7.4	5.1	chr9	86141747	86142299	(52252418)	C	MER34A	LTR/ERV1	(4)	567	1	4107396
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
3014	21.8	2.3	5.6	chr9	88720911	88721363	(49673354)	C	MER21C	LTR/ERVL	(386)	552	15	4111637
835	17.6	7.6	2.1	chr9	89369869	89372428	(49022289)	+	(TG)n	Simple_repeat	1	2755	(0)	4112438
319	24.6	6.3	3.3	chr9	89431324	89431445	(48963272)	+	L1ME4a	LINE/L1	5960	6085	(39)	4112489
253	34.0	12.2	3.0	chr9	91492359	91492522	(46902195)	C	MIRc	SINE/MIR	(72)	196	16	4115270
228	28.8	5.7	0.0	chr9	91492523	91492588	(46902129)	C	L2a	LINE/L2	(2)	3424	3355	4115271
263	13.5	0.0	0.0	chr9	92185215	92185251	(46209466)	C	Alu	SINE/Alu	(96)	37	1	4116311
12	21.8	2.7	0.0	chr9	92749268	92749304	(45645413)	+	(CAGGCC)n	Simple_repeat	1	38	(0)	4117150
259	29.9	18.6	2.0	chr9	92765544	92765600	(45629117)	C	L1MC4	LINE/L1	(191)	7851	7791	4117180
2677	19.9	11.5	0.0	chr9	92765601	92766169	(45628548)	+	MER73	LTR/ERVL	2	644	(0)	4117181
12	11.7	10.8	0.0	chr9	93058541	93058577	(45336140)	+	(GGCCCCC)n	Simple_repeat	1	41	(0)	4117634
237	29.6	2.7	0.0	chr9	93095351	93095421	(45299296)	+	MIRc	SINE/MIR	77	149	(119)	4117709
18	8.5	0.0	0.0	chr9	93117974	93117998	(45276719)	+	(A)n	Simple_repeat	1	25	(0)	4117746
12	15.5	3.5	0.0	chr9	93120105	93120133	(45274584)	+	(CCTG)n	Simple_repeat	1	30	(0)	4117749
259	21.1	0.0	6.6	chr9	96419486	96419546	(41975171)	+	L2c	LINE/L2	3331	3387	(0)	4122834
18	3.3	6.5	0.0	chr9	96654925	96654955	(41739762)	+	(CCTCGC)n	Simple_repeat	1	33	(0)	4123268
274	25.3	4.5	5.2	chr9	97503731	97503832	(40890885)	+	MIR3	SINE/MIR	1	104	(126)	4124598
50	23.0	3.8	5.9	chr9	97803191	97803463	(40591254)	+	GA-rich	Low_complexity	1	267	(0)	4125170
15	13.7	0.0	2.9	chr9	97803548	97803581	(40591136)	+	(CCGCCC)n	Simple_repeat	1	34	(0)	4125171
13	19.2	3.8	5.5	chr9	98192622	98192674	(40202043)	+	(CGC)n	Simple_repeat	1	55	(0)	4126035
12	7.2	10.3	0.0	chr9	98192676	98192704	(40202013)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4126036
325	33.3	2.6	2.4	chr9	98192889	98193096	(40201621)	+	MIR	SINE/MIR	40	246	(22)	4126037
16	14.3	0.0	6.8	chr9	100473999	100474042	(37920675)	+	G-rich	Low_complexity	1	44	(0)	4130228
802	28.3	2.9	10.0	chr9	101480209	101480549	(36914168)	C	MLT1I	LTR/ERVL-MaLR	(27)	384	69	4131763
11	18.9	0.0	7.1	chr9	105064690	105064731	(33329986)	+	(GCCAGCT)n	Simple_repeat	1	42	(0)	4136809
681	26.1	2.8	8.6	chr9	109329211	109329441	(29065276)	C	MIRc	SINE/MIR	(4)	264	37	4144275
12	16.9	0.0	0.0	chr9	109329615	109329641	(29065076)	+	(CCCT)n	Simple_repeat	1	27	(0)	4144276
20	24.2	2.5	3.7	chr9	110048556	110048634	(28346083)	+	G-rich	Low_complexity	1	81	(0)	4145581
5337	23.6	3.7	1.3	chr9	110598559	110599925	(27794792)	C	L1PA12	LINE/L1	(5517)	1464	64	4146530
12	28.1	1.7	3.3	chr9	111525290	111525348	(26869369)	+	G-rich	Low_complexity	1	60	(0)	4148038
14	3.7	10.7	0.0	chr9	111525365	111525392	(26869325)	+	(GCT)n	Simple_repeat	1	31	(0)	4148039
712	21.8	1.6	10.1	chr9	111525455	111525663	(26869054)	C	MER20	DNA/hAT-Charlie	(12)	207	17	4148040
2141	12.5	0.3	1.4	chr9	111891912	111892207	(26502510)	+	AluSc	SINE/Alu	1	293	(16)	4148747
15	21.9	1.4	8.0	chr9	112174773	112174846	(26219871)	+	(CGCCC)n	Simple_repeat	1	75	(0)	4149310
1987	13.9	4.2	4.4	chr9	113233783	113234188	(25160529)	C	L1MA4A	LINE/L1	(0)	6303	5899	4151248
2078	10.8	7.7	0.0	chr9	113234189	113234476	(25160241)	C	AluSx1	SINE/Alu	(0)	312	1	4151249
16	30.6	0.0	5.8	chr9	113377041	113377126	(25017591)	+	(CCCGC)n	Simple_repeat	1	86	(0)	4151546
286	28.8	0.0	0.0	chr9	120532559	120532631	(17862086)	+	MamRep605	LTR?	472	544	(305)	4165183
1645	17.6	0.0	2.4	chr9	120546620	120546914	(17847803)	C	AluJr	SINE/Alu	(2)	310	23	4165208
345	33.9	0.9	0.0	chr9	121282191	121282305	(17112412)	+	MIRc	SINE/MIR	120	235	(33)	4166665
250	32.9	7.0	4.6	chr9	121287251	121287403	(17107314)	+	MIR3	SINE/MIR	2	158	(50)	4166676
414	25.8	2.0	0.0	chr9	121287430	121287526	(17107191)	+	MER5A	DNA/hAT-Charlie	72	170	(19)	4166677
260	31.0	4.9	7.2	chr9	121692677	121692801	(16701916)	+	MamTip2	DNA/hAT-Tip100	47	168	(137)	4167564
181	29.4	3.8	0.0	chr9	121735426	121735476	(16659241)	+	L2b	LINE/L2	3314	3366	(9)	4167644
434	30.5	4.1	0.6	chr9	123304965	123305129	(15089588)	C	MIR	SINE/MIR	(3)	259	89	4170454
332	35.9	3.4	0.0	chr9	123360541	123360682	(15034035)	C	MER5A	DNA/hAT-Charlie	(0)	189	43	4170595
13	14.4	3.2	0.0	chr9	124045386	124045416	(14349301)	+	GA-rich	Low_complexity	1	32	(0)	4171780
273	26.1	11.1	2.3	chr9	124834716	124834884	(13559833)	+	MIRc	SINE/MIR	1	180	(28)	4173343
16	30.6	3.4	2.2	chr9	124841518	124841605	(13553112)	+	GA-rich	Low_complexity	1	91	(0)	4173363
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
1128	26.1	9.7	0.0	chr9	125387932	125388295	(13006422)	C	LTR33C	LTR/ERVL	(207)	422	20	4174567
214	35.2	2.2	1.1	chr9	125388406	125388494	(13006223)	+	L2a	LINE/L2	3337	3426	(0)	4174568
12	22.8	3.2	6.2	chr9	126914557	126914619	(11480098)	+	G-rich	Low_complexity	1	65	(0)	4177308
310	28.0	4.8	3.3	chr9	127406764	127406890	(10987827)	+	MIRb	SINE/MIR	23	144	(124)	4178145
613	31.2	3.1	0.5	chr9	127417433	127417648	(10977069)	+	MIR	SINE/MIR	41	262	(0)	4178167
23	8.6	0.0	2.5	chr9	127771613	127771652	(10623065)	+	(CCGCC)n	Simple_repeat	1	40	(0)	4178979
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
555	20.6	1.9	0.0	chr9	127907065	127907166	(10487551)	C	FLAM_C	SINE/Alu	(10)	133	30	4179304
15	17.7	2.6	0.0	chr9	128068136	128068173	(10326544)	+	G-rich	Low_complexity	1	39	(0)	4179701
16	25.9	1.6	3.1	chr9	128160164	128160226	(10234491)	+	G-rich	Low_complexity	1	64	(0)	4179864
27	6.0	0.0	0.0	chr9	128371210	128371244	(10023473)	+	(CCCTC)n	Simple_repeat	1	35	(0)	4180370
15	10.5	6.7	7.8	chr9	128722486	128722545	(9672172)	+	(AGCAGG)n	Simple_repeat	1	64	(0)	4181163
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
15	17.3	5.2	4.9	chr9	128882181	128882238	(9512479)	+	(CGGC)n	Simple_repeat	1	61	(0)	4181567
277	30.1	0.0	1.2	chr9	128902320	128902403	(9492314)	+	MIR	SINE/MIR	89	171	(91)	4181609
306	33.3	2.6	2.5	chr9	128903058	128903245	(9491472)	+	MIRb	SINE/MIR	40	235	(33)	4181610
11	20.0	1.9	7.4	chr9	129008458	129008510	(9386207)	+	(GGCAGG)n	Simple_repeat	1	54	(0)	4181864
229	24.3	13.7	0.0	chr9	129023507	129023613	(9371104)	C	MIRb	SINE/MIR	(30)	238	115	4181896
304	28.6	1.3	0.0	chr9	129023925	129024001	(9370716)	C	MIRb	SINE/MIR	(82)	186	109	4181897
185	30.2	5.0	7.7	chr9	129024000	129024103	(9370614)	+	L2b	LINE/L2	3243	3343	(32)	4181898
19	13.8	2.5	0.0	chr9	129027023	129027062	(9367655)	+	(ACAACG)n	Simple_repeat	1	41	(0)	4181906
201	24.2	1.3	0.7	chr9	129027620	129027690	(9367027)	C	MIRc	SINE/MIR	(28)	180	109	4181909
2267	7.8	0.0	0.3	chr9	129051844	129052125	(9342592)	C	AluY	SINE/Alu	(30)	281	1	4181979
2064	13.7	1.0	0.0	chr9	129052131	129052422	(9342295)	C	AluSx1	SINE/Alu	(17)	295	1	4181980
247	30.1	1.2	4.6	chr9	129081607	129081693	(9313024)	+	L3	LINE/CR1	3921	4004	(95)	4182053
212	34.1	3.6	4.3	chr9	129139771	129139911	(9254806)	+	MIR3	SINE/MIR	1	140	(68)	4182167
291	33.7	1.1	1.1	chr9	129180768	129180854	(9213863)	C	MIR	SINE/MIR	(146)	116	30	4182251
15	22.7	3.3	3.2	chr9	129258476	129258535	(9136182)	+	(GCCCC)n	Simple_repeat	1	62	(0)	4182436
13	17.2	3.0	0.0	chr9	129352295	129352327	(9042390)	+	(GCCCCT)n	Simple_repeat	1	34	(0)	4182623
294	31.6	8.6	6.1	chr9	129406429	129406724	(8987993)	+	L2b	LINE/L2	3023	3326	(49)	4182743
12	15.5	3.5	0.0	chr9	129443872	129443900	(8950817)	+	(TAA)n	Simple_repeat	1	30	(0)	4182843
356	25.0	0.0	0.0	chr9	129443925	129444000	(8950717)	+	MLT1C-int	LTR/ERVL-MaLR	474	549	(860)	4182836
660	35.5	6.0	1.7	chr9	129444019	129444052	(8950665)	+	MLT1C-int	LTR/ERVL-MaLR	624	650	(737)	4182836
2421	7.4	0.7	0.0	chr9	129444053	129444350	(8950367)	C	AluSp	SINE/Alu	(13)	300	1	4182844
756	15.6	8.6	0.0	chr9	129524473	129524632	(8870085)	C	L1MC1	LINE/L1	(13)	6320	6146	4183042
2300	10.9	0.0	0.0	chr9	129600021	129600322	(8794395)	+	AluSx1	SINE/Alu	1	302	(10)	4183223
2164	10.4	0.3	1.3	chr9	129600323	129600484	(8794233)	+	AluSx	SINE/Alu	137	296	(16)	4183222
1480	22.2	2.5	4.0	chr9	129607905	129608122	(8786595)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	157	4183239
13	22.7	3.6	3.5	chr9	129665551	129665605	(8729112)	+	G-rich	Low_complexity	1	57	(0)	4183353
225	27.8	2.2	3.2	chr9	129685651	129685743	(8708974)	C	ORSL-2b	DNA/hAT-Tip100	(386)	122	31	4183395
546	32.0	12.6	2.5	chr9	129685780	129686269	(8708448)	C	L2b	LINE/L2	(0)	3375	2823	4183396
602	13.3	10.5	0.8	chr9	129802867	129802986	(8591731)	C	FLAM_C	SINE/Alu	(10)	133	1	4183682
23	3.7	0.0	0.0	chr9	129910848	129910875	(8483842)	+	(TG)n	Simple_repeat	1	28	(0)	4183882
1760	15.0	4.5	0.0	chr9	129989758	129990031	(8404686)	+	AluJb	SINE/Alu	2	288	(24)	4184052
1302	12.9	4.3	11.6	chr9	129990032	129990234	(8404483)	+	L1MA8	LINE/L1	6122	6297	(3)	4184051
296	32.1	5.7	1.8	chr9	130201834	130202019	(8192698)	+	L2c	LINE/L2	2976	3166	(221)	4184541
246	35.2	0.3	1.3	chr9	130314809	130314930	(8079787)	C	MIR1_Amn	SINE/MIR	(89)	179	62	4184775
2173	11.3	5.0	4.2	chr9	130368570	130368947	(8025770)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4184885
487	31.8	8.8	2.6	chr9	130370155	130370461	(8024256)	C	L2c	LINE/L2	(150)	3237	2910	4184887
16	40.8	0.0	1.3	chr9	130448296	130448371	(7946346)	+	(AC)n	Simple_repeat	1	76	(0)	4185027
4257	11.6	3.6	0.2	chr9	130689849	130690460	(7704257)	+	MER51A	LTR/ERV1	1	634	(0)	4185595
267	32.5	2.6	3.4	chr9	131008853	131008970	(7385747)	C	MIR	SINE/MIR	(38)	224	108	4186187
12	14.8	4.9	4.7	chr9	131009082	131009122	(7385595)	+	(GCC)n	Simple_repeat	1	43	(0)	4186188
1995	17.1	4.5	1.0	chr9	131306569	131306951	(7087766)	+	L1MB5	LINE/L1	5778	6174	(0)	4186775
3169	13.9	1.3	4.4	chr9	131366741	131367305	(7027412)	+	LTR35A	LTR/ERV1	1	547	(0)	4186932
2565	2.7	0.0	0.0	chr9	131373778	131374077	(7020640)	+	AluY	SINE/Alu	1	300	(11)	4186947
1634	18.8	4.7	2.4	chr9	131411815	131412106	(6982611)	C	AluJr	SINE/Alu	(13)	299	1	4187050
542	17.2	12.2	0.9	chr9	132031526	132031641	(6363076)	+	FLAM_A	SINE/Alu	1	131	(11)	4188102
610	23.1	11.7	11.7	chr9	132031642	132031782	(6362935)	+	HAL1	LINE/L1	2379	2507	(0)	4188101
1650	15.7	4.5	1.1	chr9	132054425	132054705	(6340012)	C	AluJb	SINE/Alu	(17)	295	5	4188136
2922	22.0	3.1	1.6	chr9	132731039	132731797	(5662920)	+	Ricksha_b	DNA/MULE-MuDR	69	839	(416)	4189400
511	24.9	7.5	13.9	chr9	132802267	132802653	(5592064)	+	MLT1H1	LTR/ERVL-MaLR	1	360	(195)	4189530
13	21.3	1.6	7.8	chr9	132878302	132878364	(5516353)	+	(CGCCG)n	Simple_repeat	1	64	(0)	4189657
308	30.3	9.6	0.0	chr9	132994411	132994552	(5400165)	C	MIR3	SINE/MIR	(15)	193	37	4189879
16	16.8	0.0	0.0	chr9	132994560	132994587	(5400130)	+	(AC)n	Simple_repeat	1	28	(0)	4189880
309	21.7	18.4	4.0	chr9	133000982	133001106	(5393611)	C	L2a	LINE/L2	(2)	3424	3278	4189892
2160	11.4	0.3	1.6	chr9	133001132	133001265	(5393452)	+	AluSx1	SINE/Alu	2	136	(176)	4189893
2535	6.9	0.3	0.0	chr9	133001266	133001569	(5393148)	+	AluSp	SINE/Alu	1	305	(8)	4189894
365	26.1	6.4	0.0	chr9	133659158	133659284	(4735433)	+	MIRc	SINE/MIR	12	154	(114)	4190909
57	17.9	0.0	7.9	chr9	133666451	133666615	(4728102)	+	(TCC)n	Simple_repeat	1	165	(0)	4190922
258	28.6	5.8	0.0	chr9	133958808	133958905	(4435812)	C	L2c	LINE/L2	(0)	3387	3284	4191319
14	19.5	0.0	6.4	chr9	133959019	133959065	(4435652)	+	(GCCCAG)n	Simple_repeat	1	47	(0)	4191320
14	20.9	3.2	6.2	chr9	133991591	133991653	(4403064)	+	(CCGCG)n	Simple_repeat	1	65	(0)	4191370
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
17	19.5	3.5	3.4	chr9	134068534	134068590	(4326127)	+	(GGCG)n	Simple_repeat	1	59	(0)	4191478
252	28.9	8.4	5.4	chr9	134088086	134088337	(4306380)	+	L2b	LINE/L2	2910	3166	(221)	4191526
1436	25.9	1.0	2.7	chr9	134223116	134223537	(4171180)	C	L1MB5	LINE/L1	(380)	5979	5565	4191747
19	14.4	3.3	6.3	chr9	134645290	134645350	(3749367)	+	(CTGC)n	Simple_repeat	1	63	(0)	4192284
16	22.6	0.0	0.0	chr9	134658438	134658478	(3736239)	+	(CCTGCC)n	Simple_repeat	1	41	(0)	4192301
429	31.5	9.6	4.8	chr9	134779512	134779738	(3614979)	C	MIRb	SINE/MIR	(7)	261	23	4192413
300	34.4	8.3	4.6	chr9	135145272	135145640	(3249077)	+	L2b	LINE/L2	2410	2793	(626)	4192821
404	26.7	20.0	0.0	chr9	135211100	135211279	(3183438)	+	MLT1N2	LTR/ERVL-MaLR	120	344	(218)	4192907
4346	16.1	11.8	3.1	chr9	135211265	135212318	(3182399)	+	MER52C	LTR/ERV1	22	1278	(0)	4192908
4589	11.2	2.2	5.1	chr9	135468602	135469313	(2925404)	+	LTR8	LTR/ERV1	1	691	(0)	4193280
213	37.6	14.6	0.0	chr9	135502308	135502706	(2892011)	C	L2	LINE/L2	(584)	2835	2369	4193316
312	23.0	5.1	0.0	chr9	135607671	135607744	(2786973)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	90	4193438
1671	17.1	1.6	0.0	chr9	135739936	135740251	(2654466)	C	MLT1B	LTR/ERVL-MaLR	(63)	327	7	4193586
18	25.0	3.1	1.5	chr9	135786137	135786200	(2608517)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4193625
220	22.6	6.2	6.2	chr9	135797692	135797804	(2596913)	+	L2	LINE/L2	2398	2510	(909)	4193635
2039	20.5	8.9	3.3	chr9	135858564	135859083	(2535634)	C	MLT2B3	LTR/ERVL	(0)	554	3	4193704
440	28.6	10.7	2.0	chr9	135926924	135927169	(2467548)	C	MLT1G	LTR/ERVL-MaLR	(302)	289	20	4193804
29	0.0	0.0	0.0	chr9	135967784	135967808	(2426909)	+	(GT)n	Simple_repeat	1	25	(0)	4193861
76	36.3	0.9	2.1	chr9	135967825	135968156	(2426561)	+	(TG)n	Simple_repeat	1	335	(0)	4193862
200	36.0	2.6	5.9	chr9	135968262	135968379	(2426338)	C	L2a	LINE/L2	(200)	3187	3074	4193859
22	26.4	3.4	4.9	chr9	136108997	136109115	(2285602)	+	(CCCCTC)n	Simple_repeat	1	123	(0)	4194036
11	27.1	2.3	0.0	chr9	136118138	136118181	(2276536)	+	(GGCCCT)n	Simple_repeat	1	45	(0)	4194045
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
13	12.3	3.8	9.1	chr9	136118938	136118990	(2275727)	+	(GCCTGC)n	Simple_repeat	1	55	(0)	4194048
410	20.5	14.4	3.4	chr9	136120203	136120319	(2274398)	+	AluJb	SINE/Alu	1	132	(180)	4194050
147	12.1	0.4	2.4	chr9	136181700	136181950	(2212767)	+	(GGAA)n	Simple_repeat	1	252	(0)	4194126
1397	17.1	6.2	3.2	chr9	136188124	136188404	(2206313)	+	AluJr	SINE/Alu	1	290	(22)	4194135
1575	17.8	0.7	5.3	chr9	136188442	136188761	(2205956)	+	AluJr	SINE/Alu	1	305	(7)	4194136
329	27.6	6.1	9.0	chr9	136191346	136191526	(2203191)	C	MIRb	SINE/MIR	(62)	206	13	4194140
17	9.4	2.8	2.7	chr9	136205161	136205196	(2189521)	+	(CGCC)n	Simple_repeat	1	37	(0)	4194150
27	22.2	2.0	5.0	chr9	136245858	136245955	(2148762)	+	(CGCCCC)n	Simple_repeat	1	100	(0)	4194185
391	24.2	0.0	9.0	chr9	136246081	136246225	(2148492)	+	MER53	DNA/hAT	4	135	(58)	4194186
565	19.9	2.8	2.8	chr9	136339161	136339305	(2055412)	+	L1MB5	LINE/L1	6029	6173	(1)	4194283
12	26.5	3.2	3.1	chr9	136410607	136410668	(1984049)	+	(AGCGGA)n	Simple_repeat	1	64	(0)	4194344
1280	28.9	7.3	2.7	chr9	136437239	136437683	(1957034)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	4194376
1846	9.1	6.6	0.0	chr9	136438011	136438264	(1956453)	+	AluSx1	SINE/Alu	1	272	(40)	4194377
11	21.5	6.0	1.9	chr9	136483793	136483842	(1910875)	+	(GCGGCC)n	Simple_repeat	1	53	(0)	4194420
850	11.2	0.0	0.0	chr9	136504220	136504335	(1890382)	C	AluJo	SINE/Alu	(195)	117	2	4194446
2029	10.3	0.0	0.4	chr9	136539381	136539643	(1855074)	C	AluSx	SINE/Alu	(4)	308	47	4194473
211	25.6	12.3	1.6	chr9	136539795	136539917	(1854800)	+	MIR3	SINE/MIR	3	140	(68)	4194474
899	36.2	6.7	4.2	chr9	136590693	136591804	(1802913)	+	ERVL-E-int	LTR/ERVL	1684	2824	(2843)	4194526
1293	28.4	6.7	8.7	chr9	136633256	136633710	(1761007)	+	L1M4	LINE/L1	3283	3732	(2414)	4194568
2254	12.3	0.7	0.0	chr9	136633711	136634018	(1760699)	+	AluSz	SINE/Alu	1	310	(2)	4194569
24	28.0	1.3	0.0	chr9	136687441	136687517	(1707200)	+	G-rich	Low_complexity	1	78	(0)	4194651
31	27.9	2.0	4.6	chr9	136687516	136687665	(1707052)	+	(CGCCC)n	Simple_repeat	1	153	(0)	4194652
11	16.5	5.9	0.0	chr9	136691275	136691308	(1703409)	+	(GACAGAG)n	Simple_repeat	1	36	(0)	4194657
924	15.8	3.2	5.6	chr9	136694098	136694292	(1700425)	+	MER53	DNA/hAT	2	191	(2)	4194662
197	33.6	3.3	6.5	chr9	136709531	136709654	(1685063)	C	L2b	LINE/L2	(7)	3368	3249	4194703
1668	18.6	13.4	2.7	chr9	136721038	136721550	(1673167)	C	MER54B	LTR/ERVL	(0)	793	218	4194716
17	0.0	0.0	9.1	chr9	136742970	136743002	(1651715)	+	(GGGA)n	Simple_repeat	1	33	(0)	4194745
2274	6.3	0.0	6.9	chr9	136762625	136762943	(1631774)	+	AluSc8	SINE/Alu	6	302	(9)	4194766
12	13.7	6.2	0.0	chr9	136762968	136762999	(1631718)	+	(GGCAG)n	Simple_repeat	1	34	(0)	4194767
14	13.6	0.0	5.6	chr9	136790827	136790862	(1603855)	+	(GCCCC)n	Simple_repeat	1	36	(0)	4194809
343	29.6	5.9	6.6	chr9	136793227	136793515	(1601202)	C	LTR79	LTR/ERVL	(15)	512	226	4194810
1201	15.5	16.8	3.4	chr9	136794995	136795284	(1599433)	+	MLT1B	LTR/ERVL-MaLR	7	357	(33)	4194814
445	29.6	9.7	1.6	chr9	136807190	136807501	(1587216)	C	MER74B	LTR/ERVL	(10)	612	273	4194829
20	21.8	5.4	4.1	chr9	136847354	136847445	(1547272)	+	(GCCCA)n	Simple_repeat	1	97	(0)	4194873
17	16.3	3.2	6.2	chr9	136848621	136848682	(1546035)	+	(CCCCGCG)n	Simple_repeat	1	64	(0)	4194874
31	12.2	3.8	4.9	chr9	136849629	136849707	(1545010)	+	(GGCGG)n	Simple_repeat	1	82	(0)	4194876
2148	11.1	0.4	0.0	chr9	136882890	136883169	(1511548)	C	AluSx1	SINE/Alu	(31)	281	1	4194935
293	12.4	1.4	0.0	chr9	136949908	136949983	(1444734)	C	AluJb	SINE/Alu	(52)	81	1	4195039
2443	7.0	0.3	0.3	chr9	136965450	136965751	(1428966)	+	AluSp	SINE/Alu	1	302	(11)	4195056
1462	29.4	11.3	1.1	chr9	136965763	136966549	(1428168)	+	L1MC3	LINE/L1	6885	7761	(24)	4195057
17	17.9	3.1	6.1	chr9	136970690	136970753	(1423964)	+	G-rich	Low_complexity	1	66	(0)	4195068
25	6.6	3.9	3.8	chr9	136973764	136973814	(1420903)	+	(GGGTGT)n	Simple_repeat	1	53	(0)	4195070
11	11.1	6.9	0.0	chr9	137054046	137054074	(1340643)	+	(GGAGCC)n	Simple_repeat	1	31	(0)	4195154
33	0.0	0.0	0.0	chr9	137077398	137077428	(1317289)	+	(GGGGC)n	Simple_repeat	1	31	(0)	4195202
12	19.5	2.1	6.2	chr9	137200755	137200801	(1193916)	+	(GCC)n	Simple_repeat	1	48	(0)	4195340
13	18.1	0.0	7.0	chr9	137240441	137240446	(1154271)	+	(GCCCC)n	Simple_repeat	1	13	(30)	4195375
17	7.9	0.0	0.0	chr9	137240447	137240473	(1154244)	+	(CCCCT)n	Simple_repeat	1	27	(0)	4195376
13	18.1	0.0	7.0	chr9	137240474	137240483	(1154234)	+	(GCCCC)n	Simple_repeat	14	43	(0)	4195375
12	16.3	2.8	2.7	chr9	137274777	137274812	(1119905)	+	(CTGGCAG)n	Simple_repeat	1	37	(0)	4195430
17	10.8	0.0	0.0	chr9	137391630	137391659	(1003058)	+	(CCGCC)n	Simple_repeat	1	30	(0)	4195579
47	10.1	0.0	0.0	chr9	137459192	137459265	(935452)	+	(GCTCGG)n	Simple_repeat	1	74	(0)	4195658
207	25.5	9.7	6.3	chr9	137669558	137669716	(725001)	+	L2	LINE/L2	1660	1824	(1595)	4195998
2594	19.1	4.5	1.8	chrX	12159651	12160068	(143880827)	C	Tigger9b	DNA/TcMar-Tigger	(1)	623	204	4379106
37	7.0	0.0	0.0	chrX	12160069	12160113	(143880782)	+	(GT)n	Simple_repeat	1	45	(0)	4379107
2594	19.1	4.5	1.8	chrX	12160114	12160295	(143880600)	C	Tigger9b	DNA/TcMar-Tigger	(421)	203	7	4379106
1823	17.2	2.9	0.0	chrX	16804986	16805282	(139235613)	C	AluJo	SINE/Alu	(6)	306	1	4386756
390	11.5	0.0	3.2	chrX	16805338	16805400	(139235495)	+	MER66D	LTR/ERV1	307	367	(117)	4386757
2328	9.2	0.7	0.7	chrX	18677036	18677338	(137363557)	C	AluSx1	SINE/Alu	(9)	303	1	4389957
893	25.6	16.5	0.8	chrX	18677341	18677718	(137363177)	+	L2a	LINE/L2	1118	1566	(1853)	4389958
818	28.3	7.1	2.3	chrX	18875023	18875412	(137165483)	+	LTR16A1	LTR/ERVL	1	410	(46)	4390328
960	11.4	0.0	0.0	chrX	23882972	23883102	(132157793)	+	AluSz6	SINE/Alu	176	306	(6)	4398308
5162	13.2	0.6	2.6	chrX	23883104	23883918	(132156977)	+	LTR1A1	LTR/ERV1	1	799	(0)	4398309
16	0.0	0.0	0.0	chrX	24054531	24054548	(131986347)	+	(A)n	Simple_repeat	1	18	(0)	4398696
14	20.2	0.0	0.0	chrX	39688908	39688943	(116351952)	+	(CCCTC)n	Simple_repeat	1	36	(0)	4420983
15	8.5	0.0	0.0	chrX	39954029	39954053	(116086842)	+	(GGCA)n	Simple_repeat	1	25	(0)	4421512
522	28.9	7.6	7.3	chrX	39970339	39970719	(116070176)	+	MLT1H	LTR/ERVL-MaLR	22	403	(146)	4421549
48	0.0	0.0	0.0	chrX	40014386	40014426	(116026469)	+	(GT)n	Simple_repeat	1	41	(0)	4421630
16	5.2	0.0	0.0	chrX	40014427	40014446	(116026449)	+	(CG)n	Simple_repeat	1	20	(0)	4421631
2286	11.9	0.0	0.0	chrX	40025845	40026147	(116014748)	+	AluSz	SINE/Alu	1	303	(9)	4421659
19	7.3	0.0	0.0	chrX	40090448	40090476	(115950419)	+	(CGGGG)n	Simple_repeat	1	29	(0)	4421754
1317	11.3	20.7	0.4	chrX	41330453	41330683	(114710212)	C	AluSz	SINE/Alu	(22)	290	1	4424159
272	31.7	13.9	2.1	chrX	41330687	41330876	(114710019)	C	MIRc	SINE/MIR	(43)	225	10	4424160
35	26.4	2.8	3.4	chrX	41333339	41333480	(114707415)	+	(CTCCC)n	Simple_repeat	1	146	(0)	4424165
4709	10.5	8.8	4.3	chrX	44996917	44997713	(111043182)	C	LTR1A2	LTR/ERV1	(0)	837	1	4430158
17	8.8	0.0	0.0	chrX	46577118	46577141	(109463754)	+	(T)n	Simple_repeat	1	24	(0)	4432410
196	33.6	4.2	3.4	chrX	46577142	46577258	(109463637)	C	L2c	LINE/L2	(1)	3386	3269	4432411
233	29.9	10.7	0.7	chrX	47200426	47200560	(108840335)	C	L2c	LINE/L2	(261)	3126	2977	4433594
210	27.9	9.0	0.0	chrX	47200594	47200654	(108840241)	+	L2b	LINE/L2	3309	3375	(0)	4433595
13	14.8	0.0	3.1	chrX	47233316	47233347	(108807548)	+	G-rich	Low_complexity	1	32	(0)	4433639
13374	18.3	3.0	2.9	chrX	47500992	47502117	(108538778)	+	MER68-int	LTR/ERVL	611	1765	(1225)	4434306
16	21.1	4.1	0.0	chrX	47582233	47582281	(108458614)	+	G-rich	Low_complexity	1	51	(0)	4434475
3061	24.4	5.4	10.1	chrX	48531342	48532203	(107508692)	C	MLT1B-int	LTR/ERVL-MaLR	(304)	1067	241	4436264
17	25.0	2.6	3.9	chrX	48957150	48957225	(107083670)	+	(CGCCCA)n	Simple_repeat	1	78	(0)	4437161
14	23.8	2.0	1.9	chrX	49053966	49054016	(106986879)	+	(ACCCCTG)n	Simple_repeat	1	52	(0)	4437396
12	10.2	10.6	3.9	chrX	49101263	49101309	(106939586)	+	(ATCGACC)n	Simple_repeat	1	52	(0)	4437494
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
21	15.9	0.0	0.0	chrX	53048354	53048400	(102992495)	+	(C)n	Simple_repeat	1	47	(0)	4442939
25	14.8	7.2	1.4	chrX	53048429	53048497	(102992398)	+	(CTCC)n	Simple_repeat	1	74	(0)	4442940
236	22.4	0.0	2.7	chrX	53093377	53093451	(102947444)	+	MIR3	SINE/MIR	78	152	(78)	4443028
262	22.0	0.0	0.0	chrX	54807589	54807638	(101233257)	+	MIRb	SINE/MIR	10	59	(209)	4446410
19	25.4	5.3	0.0	chrX	54808161	54808235	(101232660)	+	(AGTAGGA)n	Simple_repeat	1	79	(0)	4446411
14	27.3	5.3	1.2	chrX	54808223	54808298	(101232597)	+	G-rich	Low_complexity	1	80	(0)	4446412
16	27.3	0.0	0.0	chrX	56229192	56229236	(99811659)	+	GA-rich	Low_complexity	1	45	(0)	4447966
18	22.7	0.0	3.6	chrX	56232300	56232354	(99808541)	+	(CCT)n	Simple_repeat	1	55	(0)	4447971
253	3.1	0.0	0.0	chrX	63351606	63351637	(92689258)	C	HAL1ME	LINE/L1	(2280)	185	154	4450078
398	32.3	1.1	3.0	chrX	65582194	65582365	(90458530)	+	MIR3	SINE/MIR	43	205	(3)	4452561
505	31.1	2.7	2.8	chrX	65595707	65595907	(90444988)	C	MIR3	SINE/MIR	(1)	207	7	4452584
18	24.8	4.7	3.3	chrX	70455085	70455115	(85585780)	+	(CCCT)n	Simple_repeat	1	66	(24)	4459703
75	1.5	0.0	0.0	chrX	71146154	71146221	(84894674)	+	(CA)n	Simple_repeat	1	68	(0)	4460883
31	13.7	6.0	0.0	chrX	71146222	71146237	(84894658)	+	(CT)n	Simple_repeat	1	18	(0)	4460884
31	34.6	1.6	0.0	chrX	71146349	71146475	(84894420)	+	(TG)n	Simple_repeat	1	129	(0)	4460885
9478	5.4	0.4	11.1	chrX	71644371	71645918	(84394977)	C	SVA_B	Retroposon/SVA	(0)	1383	1	4462004
394	25.5	3.9	2.0	chrX	72277439	72277538	(83763357)	C	L2b	LINE/L2	(17)	3358	3257	4463037
587	15.9	1.7	0.9	chrX	72305786	72305899	(83734996)	C	MIRc	SINE/MIR	(130)	138	24	4463099
19	16.5	0.0	0.0	chrX	72305953	72305986	(83734909)	+	(GT)n	Simple_repeat	1	34	(0)	4463100
14842	10.1	2.5	1.8	chrX	72554391	72556934	(83483961)	+	L1PBa	LINE/L1	636	3383	(3479)	4463555
2309	10.7	0.0	2.5	chrX	73911882	73912199	(82128696)	C	AluSx	SINE/Alu	(1)	311	2	4464903
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
21199	9.8	0.8	1.8	chrX	76159025	76165478	(79875417)	+	L1PA7	LINE/L1	3	6454	(15)	4467310
12	14.7	3.3	0.0	chrX	101617440	101617469	(54423426)	+	(CCCACC)n	Simple_repeat	1	31	(0)	4496263
495	28.5	10.4	3.2	chrX	103674546	103674795	(52366100)	+	LTR33	LTR/ERVL	23	292	(223)	4498976
15	14.7	2.4	4.7	chrX	103674813	103674854	(52366041)	+	(CCCCT)n	Simple_repeat	1	43	(0)	4498977
1779	13.1	9.8	4.3	chrX	103674885	103675252	(52365643)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	4498978
27	11.7	2.1	0.0	chrX	107673123	107673170	(48367725)	+	(GTGT)n	Simple_repeat	1	49	(0)	4504615
324	25.8	11.9	1.9	chrX	107674838	107674995	(48365900)	+	Plat_L3	LINE/CR1	2781	2956	(630)	4504617
684	27.1	3.4	0.0	chrX	107748147	107748328	(48292567)	+	MIR3	SINE/MIR	19	201	(7)	4504750
20	10.4	0.0	0.0	chrX	107775659	107775690	(48265205)	+	(TCC)n	Simple_repeat	1	32	(0)	4504800
17	16.0	0.0	0.0	chrX	107775831	107775865	(48265030)	+	(CCCT)n	Simple_repeat	1	35	(0)	4504801
24244	6.6	0.8	0.2	chrX	110229539	110232609	(45808286)	+	L1PA6	LINE/L1	180	3254	(3065)	4508111
217	16.2	0.0	0.0	chrX	111681010	111681046	(44359849)	+	MIR	SINE/MIR	197	233	(29)	4510262
12004	11.0	1.7	0.8	chrX	115960048	115962507	(40078388)	+	L1PB1	LINE/L1	255	2733	(4130)	4516168
17	23.5	8.1	1.1	chrX	118495733	118495818	(37545077)	+	(AGCG)n	Simple_repeat	1	93	(0)	4519349
17	24.1	3.3	1.6	chrX	118727424	118727483	(37313412)	+	(GCC)n	Simple_repeat	1	62	(0)	4519783
2288	11.9	0.0	0.3	chrX	119410606	119410917	(36629978)	+	AluSx1	SINE/Alu	1	311	(1)	4521000
1117	10.0	1.3	0.0	chrX	119887931	119888080	(36152815)	C	AluJb	SINE/Alu	(34)	278	127	4522066
18	0.0	0.0	0.0	chrX	120015556	120015575	(36025320)	+	(TG)n	Simple_repeat	1	20	(0)	4522331
67	6.8	2.1	0.0	chrX	120015575	120015667	(36025228)	+	(GA)n	Simple_repeat	1	95	(0)	4522332
5668	7.4	7.1	3.8	chrX	120469483	120470556	(35570339)	C	L1PA8A	LINE/L1	(0)	6131	5051	4522979
12	23.9	0.0	2.4	chrX	120561001	120561041	(35479854)	+	G-rich	Low_complexity	1	41	(0)	4523167
22747	8.9	1.9	0.7	chrX	123648006	123654416	(32386479)	+	L1PA7	LINE/L1	1	6468	(1)	4527053
84	2.5	0.0	0.0	chrX	129606979	129607061	(26433834)	+	(GAAG)n	Simple_repeat	1	83	(0)	4534951
232	31.1	0.0	0.0	chrX	129607256	129607316	(26433579)	C	Plat_L3	LINE/CR1	(5)	3581	3521	4534952
334	28.4	3.5	1.8	chrX	129831672	129831782	(26209113)	C	MamRTE1	LINE/RTE-BovB	(5)	3807	3695	4535394
15	15.9	2.9	0.0	chrX	129932336	129932370	(26108525)	+	(TCCC)n	Simple_repeat	1	36	(0)	4535598
191	22.6	4.1	8.8	chrX	129940081	129940182	(26100713)	C	L3b	LINE/CR1	(382)	4850	4754	4535610
375	26.8	4.0	0.0	chrX	130053325	130053421	(25987474)	+	X6A_LINE	LINE/CR1	966	1066	(14)	4535857
13	17.7	2.5	2.4	chrX	130097927	130097966	(25942929)	+	(CTGCCCT)n	Simple_repeat	1	41	(0)	4535952
14	15.3	2.6	2.6	chrX	130524336	130524373	(25516522)	+	(GGAGTGG)n	Simple_repeat	1	39	(0)	4536676
3125	25.6	5.0	8.6	chrX	134315891	134316420	(21724475)	+	L1MA8	LINE/L1	1085	1577	(5202)	4542421
16	23.4	2.9	4.2	chrX	135985459	135985528	(20055367)	+	G-rich	Low_complexity	1	72	(0)	4545166
1868	16.7	7.8	1.6	chrX	136162832	136163202	(19877693)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	1	4545537
17	20.4	2.2	0.0	chrX	136909304	136909348	(19131547)	+	G-rich	Low_complexity	1	46	(0)	4546851
13	26.0	1.3	7.5	chrX	149940246	149940324	(6100571)	+	G-rich	Low_complexity	1	80	(0)	4565180
235	32.6	1.0	0.0	chrX	152872761	152872855	(3168040)	+	Charlie24	DNA/hAT-Charlie	2345	2440	(10)	4569524
1240	23.8	5.3	3.8	chrX	153697561	153697984	(2342911)	+	L1MB3	LINE/L1	5725	6155	(28)	4570625
237	21.6	0.0	0.0	chrX	153698032	153698082	(2342813)	C	L2	LINE/L2	(1484)	1935	1885	4570624
172	17.9	0.6	3.0	chrX	153776469	153776834	(2264061)	+	G-rich	Low_complexity	1	368	(0)	4570730
19	22.1	3.3	1.6	chrX	153886174	153886246	(2154649)	+	(GGCGG)n	Simple_repeat	1	74	(0)	4570880
27	0.0	0.0	0.0	chrX	153886263	153886288	(2154607)	+	(CCCGC)n	Simple_repeat	1	26	(0)	4570881
186	34.9	4.5	4.5	chrX	153902212	153902322	(2138573)	+	L3	LINE/CR1	2822	2932	(1167)	4570918
350	30.2	3.4	4.3	chrX	153904338	153904500	(2136395)	+	MIR3	SINE/MIR	38	194	(14)	4570924
12	22.0	4.8	4.5	chrX	153928490	153928552	(2112343)	+	(CCGGCTG)n	Simple_repeat	1	66	(0)	4570954
194	31.8	15.0	1.7	chrX	153939781	153939953	(2100942)	+	L2a	LINE/L2	3137	3336	(90)	4570973
28	0.0	0.0	0.0	chrX	153972940	153972965	(2067930)	+	(GCG)n	Simple_repeat	1	26	(0)	4570997
17	31.3	2.0	3.9	chrX	154397618	154397718	(1643177)	+	G-rich	Low_complexity	1	103	(0)	4571791
24	24.1	0.0	1.5	chrX	154437168	154437232	(1603663)	+	(GCG)n	Simple_repeat	1	65	(0)	4571862
12	12.6	0.0	3.6	chrX	154443164	154443191	(1597704)	+	(CCCAG)n	Simple_repeat	1	28	(0)	4571866