3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
342	19.1	14.3	0.0	chr1	7538038	7538097	(241418325)	+	Arthur1C	DNA/hAT-Tip100	1	74	(289)	9961
940	25.9	2.9	0.5	chr1	7538098	7538299	(241418123)	C	MER63A	DNA/hAT-Blackjack	(0)	210	4	9962
250	27.9	0.0	7.5	chr1	26956205	26956297	(222000125)	+	MIR3	SINE/MIR	30	115	(93)	50550
996	20.6	6.3	4.1	chr1	26956381	26956916	(221999506)	+	L1MC4	LINE/L1	7317	7979	(63)	50551
260	27.7	2.1	5.0	chr1	32248100	32248198	(216708224)	C	MER5B	DNA/hAT-Charlie	(49)	129	34	62399
7368	7.4	2.1	0.7	chr1	45513511	45514465	(203441957)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	88187
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	18.9	2.8	0.0	chr1	64745015	64745050	(184211372)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	124431
25	25.0	3.5	1.1	chr1	64745175	64745261	(184211161)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	124432
18	19.6	0.0	4.0	chr1	84621094	84621143	(164335279)	+	G-rich	Low_complexity	1	50	(0)	152806
29	0.0	0.0	0.0	chr1	84621265	84621289	(164335133)	+	(TG)n	Simple_repeat	1	25	(0)	152807
17	10.4	0.0	3.0	chr1	85276551	85276583	(163679839)	+	(CGACG)n	Simple_repeat	1	33	(0)	153916
2153	13.5	0.3	1.0	chr1	100350912	100351222	(148605200)	+	AluSz6	SINE/Alu	1	309	(3)	176445
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
2594	18.6	6.9	0.8	chr1	101285139	101285894	(147670528)	+	L1MC4a	LINE/L1	7062	7995	(0)	177813
2212	15.1	1.0	0.0	chr1	108651363	108651667	(140304755)	+	AluSx	SINE/Alu	1	308	(4)	187070
20	29.1	3.9	3.8	chr1	108651668	108651769	(140304653)	+	GA-rich	Low_complexity	1	106	(0)	187071
1863	25.3	5.6	3.4	chr1	108651917	108652527	(140303895)	+	L1MC4	LINE/L1	7417	8041	(1)	187072
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
323	24.6	8.2	5.6	chr1	153494735	153494876	(95461546)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	465	224172
2295	5.4	0.0	5.4	chr1	156105837	156106149	(92850273)	+	AluY	SINE/Alu	1	296	(15)	229495
2361	9.3	0.0	0.0	chr1	156161981	156162281	(92794141)	+	AluSc	SINE/Alu	1	301	(8)	229608
12	20.4	0.0	2.8	chr1	157045373	157045408	(91911014)	+	(CTCCCT)n	Simple_repeat	1	36	(0)	231175
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
5008	15.1	0.6	1.0	chr1	162125434	162126304	(86830118)	C	L1PB3	LINE/L1	(1154)	4992	4126	238629
973	22.1	1.7	1.4	chr1	162126321	162126551	(86829871)	C	L1MC4	LINE/L1	(493)	7549	7197	238628
2182	23.0	5.4	5.0	chr1	162126545	162127243	(86829179)	C	L1MC5a	LINE/L1	(2146)	631	5	238625
510	12.8	1.9	6.4	chr1	164321607	164321715	(84634707)	+	ORSL	DNA/hAT-Tip100	1	104	(171)	241908
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
258	25.4	0.0	0.0	chr1	179586108	179586166	(69370256)	C	HAL1ME	LINE/L1	(2285)	180	122	265037
20	0.0	0.0	0.0	chr1	179586177	179586198	(69370224)	+	(A)n	Simple_repeat	1	22	(0)	265038
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
5286	19.7	6.4	4.4	chr1	180771316	180772523	(68183899)	C	L1MC4a	LINE/L1	(18)	7864	6163	266930
4099	23.1	8.6	2.4	chr1	181860865	181862277	(67094145)	+	L1MC4a	LINE/L1	6256	7764	(118)	268546
2215	14.1	2.6	1.1	chr1	181862283	181862662	(67093760)	+	MLT1B	LTR/ERVL-MaLR	5	390	(0)	268549
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
2399	8.9	0.3	0.0	chr1	200488024	200488305	(48468117)	+	AluSp	SINE/Alu	1	283	(30)	294358
674	16.9	0.8	0.0	chr1	208034100	208034217	(40922205)	C	MER94	DNA/hAT-Blackjack	(13)	121	3	307502
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
1433	22.9	5.4	0.3	chr1	236070337	236070669	(12885753)	C	L1MC4	LINE/L1	(126)	7916	7566	350925
915	20.2	2.4	0.0	chr1	236070670	236070832	(12885590)	C	FAM	SINE/Alu	(18)	167	1	350928
1864	18.6	3.6	1.2	chr1	236070833	236071236	(12885186)	C	L1MC4	LINE/L1	(470)	7572	7159	350925
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
15077	17.5	2.5	4.1	chr1	240253269	240255357	(8701065)	C	L1MA4A	LINE/L1	(4772)	2077	3	357369
32	23.7	2.2	1.1	chr1	241357511	241357599	(7598823)	+	(GATG)n	Simple_repeat	1	91	(0)	359176
30	24.1	0.9	4.7	chr1	241639705	241639834	(7316588)	+	(GGCGG)n	Simple_repeat	1	125	(0)	359585
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
687	18.1	0.0	9.7	chr1	244868455	244868576	(4087846)	+	L1MA10	LINE/L1	6176	6290	(44)	364921
1969	11.9	0.7	5.5	chr1	244868577	244868888	(4087534)	C	AluSq	SINE/Alu	(16)	297	1	364922
204	31.3	8.0	6.4	chr10	12247462	12247744	(121549678)	+	L2	LINE/L2	1627	1914	(1505)	388479
434	32.3	7.0	0.5	chr10	17235427	17235625	(116561797)	C	MIRb	SINE/MIR	(30)	238	26	397009
2563	24.0	2.2	1.2	chr10	20060989	20061663	(113735759)	C	L1MC4a	LINE/L1	(0)	7882	7201	401542
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
4260	18.6	7.5	0.2	chr10	49877420	49878333	(83919089)	+	L1MC4a	LINE/L1	6707	7692	(190)	442448
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
12	15.6	7.3	5.1	chr10	84328520	84328574	(49468848)	+	(GCTGCGC)n	Simple_repeat	1	59	(0)	496706
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
18	8.5	0.0	0.0	chr10	96126287	96126311	(37671111)	+	(T)n	Simple_repeat	1	25	(0)	515444
646	15.1	3.2	6.2	chr10	96126377	96126538	(37670884)	C	L1MEh	LINE/L1	(802)	1433	1277	515445
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
4900	22.6	6.4	3.9	chr10	97692735	97693547	(36103875)	+	L1MC4	LINE/L1	6624	7483	(559)	518513
2198	9.1	0.0	0.0	chr10	97693548	97693843	(36103579)	+	AluSx3	SINE/Alu	1	296	(15)	518514
18386	14.2	2.2	0.6	chr10	98663410	98669897	(35127525)	+	L1PA16	LINE/L1	1	6634	(0)	520319
1662	10.5	6.2	3.0	chr10	103350167	103350432	(30446990)	+	AluJo	SINE/Alu	12	286	(26)	528776
35	18.3	0.0	0.0	chr10	103350768	103350835	(30446587)	+	(TCC)n	Simple_repeat	1	68	(0)	528777
12	17.5	3.1	0.0	chr10	103350852	103350883	(30446539)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	528778
3211	20.0	7.0	3.7	chr10	118562322	118563273	(15234149)	+	L1MC4	LINE/L1	7069	8042	(0)	552249
15	18.9	0.0	8.8	chr10	119104378	119104434	(14692988)	+	(CCCG)n	Simple_repeat	1	57	(0)	553223
24	16.1	2.9	4.3	chr10	119104543	119104610	(14692812)	+	(GGCGC)n	Simple_repeat	1	70	(0)	553224
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
4995	21.6	7.6	7.3	chr10	125876402	125877178	(7920244)	+	L1MC4	LINE/L1	7242	8042	(0)	564127
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
2400	5.8	0.3	0.3	chr11	518188	518481	(134568141)	C	AluY	SINE/Alu	(17)	294	1	573498
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
1701	15.4	7.6	0.4	chr11	3632354	3632633	(131453989)	C	AluJb	SINE/Alu	(8)	304	3	577363
262	29.6	7.0	9.0	chr11	3632634	3632675	(131453947)	C	Charlie13b	DNA/hAT-Charlie	(421)	91	56	577362
454	30.4	8.0	9.6	chr11	3632991	3633045	(131453577)	+	L2c	LINE/L2	2674	2717	(702)	577364
2050	14.4	0.0	0.3	chr11	3633046	3633336	(131453286)	C	AluSx1	SINE/Alu	(22)	290	1	577365
1764	13.3	0.4	1.2	chr11	3799257	3799512	(131287110)	+	AluSx1	SINE/Alu	1	254	(58)	577724
15	31.9	2.1	7.0	chr11	10931608	10931747	(124154875)	+	G-rich	Low_complexity	1	143	(0)	588402
1730	20.2	6.3	3.4	chr11	15214652	15215035	(119871587)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	595127
426	26.2	1.3	3.2	chr11	36098995	36099148	(98987474)	C	L1ME4c	LINE/L1	(601)	229	79	627854
352	27.3	7.5	0.0	chr11	36099389	36099549	(98987073)	C	L1ME3F	LINE/L1	(306)	5937	5764	627855
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
1453	17.4	2.8	0.0	chr11	79442846	79443120	(55643502)	+	L1MC4	LINE/L1	7220	7502	(540)	693951
326	24.3	8.6	10.3	chr11	79443138	79443167	(55643455)	C	L2b	LINE/L2	(223)	3164	3130	693950
1488	16.8	2.9	4.9	chr11	79443168	79443453	(55643169)	C	AluJr	SINE/Alu	(32)	280	1	693952
2325	11.1	0.3	0.0	chr11	80714161	80714484	(54372138)	C	L1PA13	LINE/L1	(398)	5765	5441	696247
1739	9.4	4.3	3.3	chr11	80714481	80714755	(54371867)	+	L1PA13	LINE/L1	5868	6145	(18)	696247
18	17.6	0.0	0.0	chr11	80714991	80715022	(54371600)	+	(CT)n	Simple_repeat	1	32	(0)	696248
27	21.0	1.7	0.0	chr11	80715025	80715084	(54371538)	+	(AC)n	Simple_repeat	1	61	(0)	696249
491	32.7	2.0	2.2	chr11	80715109	80715322	(54371300)	+	MIRb	SINE/MIR	25	247	(21)	696250
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
1919	9.5	6.3	1.8	chr11	103110039	103110311	(31976311)	C	AluSz	SINE/Alu	(26)	286	1	729013
2374	25.1	1.1	0.5	chr11	116289660	116290291	(18796331)	+	L1MC4	LINE/L1	7104	7739	(303)	749041
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
2137	19.2	13.4	1.8	chr11	130851085	130851637	(4234985)	+	L1MC4a	LINE/L1	7255	7881	(1)	772503
1779	9.5	0.0	0.4	chr12	1543577	1543819	(131731490)	C	AluSx	SINE/Alu	(16)	296	55	780839
1845	18.4	5.0	5.0	chr12	1543820	1544025	(131731284)	C	L1MC4a	LINE/L1	(331)	7551	7343	780838
231	16.7	8.3	1.5	chr12	1544018	1544084	(131731225)	C	L1MEf	LINE/L1	(4090)	2110	2039	780840
1011	26.0	11.4	3.7	chr12	1544097	1544579	(131730730)	C	L1MEf	LINE/L1	(4274)	1926	1402	780840
1534	18.5	3.9	0.0	chr12	10612073	10612190	(122663119)	+	AluSz	SINE/Alu	6	133	(179)	795424
66	0.0	0.0	0.0	chr12	10612191	10612249	(122663060)	+	(ATAAC)n	Simple_repeat	1	59	(0)	795425
1534	18.5	3.9	0.0	chr12	10612250	10612401	(122662908)	+	AluSz	SINE/Alu	134	286	(26)	795424
15	0.0	0.0	0.0	chr12	10612402	10612420	(122662889)	+	(TAA)n	Simple_repeat	1	19	(0)	795426
12	12.3	5.1	4.9	chr12	12562720	12562758	(120712551)	+	G-rich	Low_complexity	1	41	(0)	798343
23	11.5	0.0	0.0	chr12	12562926	12562963	(120712346)	+	(CCT)n	Simple_repeat	1	38	(0)	798344
13	20.4	0.0	7.7	chr12	12562962	12563013	(120712296)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	798345
2149	12.1	0.7	0.0	chr12	17097227	17097508	(116177801)	C	AluSx	SINE/Alu	(24)	288	5	805103
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
306	29.0	1.4	2.8	chr12	21653660	21653801	(111621508)	+	L1MC4	LINE/L1	7902	8041	(1)	811053
1502	26.1	6.6	2.6	chr12	21653797	21654445	(111620864)	+	L1MC4	LINE/L1	7225	7901	(141)	811056
2466	17.6	9.9	3.4	chr12	27213878	27214501	(106060808)	+	MER52C	LTR/ERV1	290	958	(320)	819192
2017	19.1	11.8	3.4	chr12	48803149	48803262	(84472047)	+	L1MC4	LINE/L1	7347	7454	(588)	845822
2048	13.7	0.0	0.7	chr12	48803263	48803554	(84471755)	C	AluSx	SINE/Alu	(22)	290	1	845823
2017	19.1	11.8	3.4	chr12	48803555	48804063	(84471246)	+	L1MC4	LINE/L1	7455	8030	(12)	845822
405	27.2	9.8	0.0	chr12	52879836	52879982	(80395327)	+	MER91A	DNA/hAT-Tip100	31	193	(3)	853569
2220	23.6	5.6	8.0	chr12	63101279	63101652	(70173657)	+	L1MC4	LINE/L1	7258	7622	(420)	868976
3120	13.9	1.6	0.2	chr12	63101653	63102151	(70173158)	+	MER84	LTR/ERV1	2	507	(0)	868977
12	16.1	5.7	0.0	chr12	63844435	63844469	(69430840)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	870032
2209	23.5	8.8	1.1	chr12	103632211	103632822	(29642487)	C	LTR41B	LTR/ERVL	(9)	749	87	930979
1602	20.2	6.6	2.1	chr12	110999626	110999999	(22275310)	+	L1MC4	LINE/L1	7268	7659	(383)	946088
3200	21.3	7.8	0.7	chr12	111107782	111108594	(22166715)	C	L1MC4a	LINE/L1	(0)	7882	7008	946320
4565	22.1	6.9	2.4	chr12	113517026	113517900	(19757409)	C	L1MC4	LINE/L1	(114)	7928	7000	951779
3001	21.9	2.7	1.8	chr12	115775511	115776197	(17499112)	C	L1MC4a	LINE/L1	(10)	7872	7179	956759
368	7.2	6.7	3.5	chr12	115776222	115776279	(17499030)	C	L1PA6	LINE/L1	(6)	6148	6089	956760
16	33.1	1.4	1.3	chr12	117190381	117190454	(16084855)	+	(CCG)n	Simple_repeat	1	75	(0)	959740
15	20.1	2.9	0.0	chr12	117190477	117190510	(16084799)	+	(CG)n	Simple_repeat	1	35	(0)	959741
340	25.2	13.3	0.9	chr12	117190765	117190876	(16084433)	C	MIRb	SINE/MIR	(47)	221	94	959742
1664	19.9	0.3	0.3	chr12	130867394	130867679	(2407630)	+	AluJr	SINE/Alu	9	294	(18)	987372
1825	19.4	8.6	5.2	chr12	130867682	130867843	(2407466)	+	L1MC4	LINE/L1	7405	7553	(489)	987373
2281	11.5	0.0	0.0	chr12	130867844	130868138	(2407171)	+	AluSx1	SINE/Alu	1	295	(17)	987374
317	33.0	5.7	3.2	chr12	132192475	132192662	(1082647)	+	MIRb	SINE/MIR	6	198	(70)	989193
2419	5.8	0.0	0.3	chr12	132686453	132686747	(588562)	+	AluSx1	SINE/Alu	1	294	(18)	989771
1353	17.7	1.3	7.3	chr12	132686748	132686870	(588439)	C	AluJb	SINE/Alu	(196)	116	1	989770
13	28.4	3.3	1.6	chr12	132687508	132687568	(587741)	+	(GGCGC)n	Simple_repeat	1	63	(0)	989772
21	6.4	0.0	2.9	chr12	132887158	132887192	(388117)	+	(CCCGGC)n	Simple_repeat	1	35	(0)	990111
1065	28.4	3.4	10.7	chr13	27143133	27143869	(87220459)	+	L1MC5a	LINE/L1	1576	2256	(521)	1004393
1882	15.6	1.7	0.7	chr13	27143924	27144211	(87220117)	+	AluJb	SINE/Alu	3	293	(19)	1004394
1806	15.3	5.5	0.4	chr13	27624621	27624894	(86739434)	+	AluJb	SINE/Alu	1	289	(23)	1005255
349	31.8	11.3	8.2	chr13	27624895	27625170	(86739158)	C	L2c	LINE/L2	(140)	3247	2956	1005254
11	24.1	0.0	0.0	chr13	51453641	51453674	(62910654)	+	G-rich	Low_complexity	1	34	(0)	1041604
17442	17.3	1.9	3.8	chr13	62508644	62513010	(51851318)	C	L1PA16	LINE/L1	(1686)	4797	551	1056092
753	22.8	1.9	0.0	chr13	62513011	62513168	(51851160)	+	MER2B	DNA/TcMar-Tigger	176	336	(0)	1056095
4033	18.8	13.4	4.5	chr13	65812405	65813329	(48550999)	+	LTR28	LTR/ERV1	1	1020	(0)	1060247
4875	23.4	8.7	1.0	chr13	74390718	74392325	(39972003)	C	L1MC4a	LINE/L1	(16)	7866	6095	1071895
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
2441	18.9	13.3	3.3	chr13	75598142	75598872	(38765456)	C	L1MC4	LINE/L1	(1)	8041	7378	1073629
588	19.0	7.2	2.1	chr13	75598898	75599042	(38765286)	C	L1MC4	LINE/L1	(935)	7107	6955	1073630
9373	12.0	7.2	2.9	chr13	76123745	76125254	(38239074)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1074317
188	34.9	3.5	1.2	chr13	79409943	79410026	(34954302)	+	L2c	LINE/L2	2993	3078	(309)	1078876
257	31.1	5.6	2.5	chr13	79410149	79410270	(34954058)	+	L2c	LINE/L2	3253	3378	(9)	1078876
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
5568	20.0	3.7	0.4	chr13	84273849	84275113	(30089215)	C	L1M2	LINE/L1	(873)	5270	3962	1085029
23	9.1	0.0	0.0	chr13	84275114	84275149	(30089179)	+	(ATTT)n	Simple_repeat	1	36	(0)	1085031
938	20.5	0.4	12.5	chr13	84275168	84275423	(30088905)	C	L1P4a	LINE/L1	(6278)	225	1	1085032
3204	20.8	1.4	8.1	chr13	84275410	84276310	(30088018)	C	L1M2	LINE/L1	(3194)	2949	2110	1085029
683	32.5	8.7	2.3	chr13	87124037	87124421	(27239907)	C	MamRTE1	LINE/RTE-BovB	(100)	3712	3301	1088601
2619	18.4	10.2	3.4	chr13	94976056	94976814	(19387514)	C	L1MC4a	LINE/L1	(0)	7882	7067	1099193
3456	23.9	11.3	5.7	chr13	95263838	95264864	(19099464)	+	L1MC4	LINE/L1	6769	7873	(169)	1099653
841	18.5	3.6	5.3	chr13	111442687	111442914	(2921414)	C	L1MC4	LINE/L1	(501)	7541	7318	1122533
2277	3.6	3.1	6.2	chr14	20342727	20343030	(86700688)	C	AluY	SINE/Alu	(17)	294	1	1127886
22	3.8	0.0	0.0	chr14	20343033	20343065	(86700653)	+	(T)n	Simple_repeat	1	33	(0)	1127887
2190	11.6	4.0	0.0	chr14	21191465	21191756	(85851962)	+	AluSq	SINE/Alu	1	304	(9)	1129251
3953	21.9	6.8	8.6	chr14	21191757	21191933	(85851785)	+	L1ME3	LINE/L1	961	1130	(5503)	1129250
6733	20.8	9.8	3.7	chr14	21191934	21193578	(85850140)	+	MER52A	LTR/ERV1	1	1755	(0)	1129252
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
27	22.9	0.9	7.1	chr14	26598275	26598385	(80445333)	+	G-rich	Low_complexity	1	112	(0)	1137004
3475	17.1	9.4	0.7	chr14	33881844	33882578	(73161140)	+	L1MC4	LINE/L1	6975	7780	(262)	1146860
2507	9.8	0.0	0.3	chr14	61817135	61817439	(45226279)	+	AluSq2	SINE/Alu	1	304	(9)	1187124
1865	21.4	16.2	3.5	chr14	61817440	61817985	(45225733)	+	L1MC4	LINE/L1	7395	8022	(20)	1187120
439	26.4	20.2	2.0	chr14	76352536	76352736	(30690982)	+	MIR	SINE/MIR	16	262	(0)	1212042
12	18.6	6.7	2.1	chr14	76486228	76486272	(30557446)	+	(GCCT)n	Simple_repeat	1	48	(0)	1212305
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
2544	19.3	11.7	2.6	chr14	90037508	90038153	(17005565)	C	L1MC4	LINE/L1	(6)	8036	7340	1233137
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
4299	21.9	6.7	2.3	chr15	55877005	55878099	(46113090)	C	L1MC4a	LINE/L1	(6)	7876	6728	1316361
3880	20.3	5.5	2.1	chr15	70304744	70305637	(31685552)	C	L1MC4	LINE/L1	(124)	7918	6993	1341901
19	17.0	0.0	0.0	chr15	70853980	70854019	(31137170)	+	(CCTCGT)n	Simple_repeat	1	40	(0)	1342866
32	0.0	7.5	0.0	chr15	70854226	70854265	(31136924)	+	(CGC)n	Simple_repeat	1	43	(0)	1342867
338	15.8	24.9	0.8	chr15	73676743	73676876	(28314313)	C	L2a	LINE/L2	(1668)	1751	1575	1347518
230	28.9	2.6	1.7	chr15	73677053	73677168	(28314021)	+	L2c	LINE/L2	3084	3200	(187)	1347520
276	32.9	3.8	0.3	chr15	73677497	73677621	(28313568)	C	MIR3	SINE/MIR	(134)	134	4	1347521
59	15.3	2.1	5.4	chr15	77523087	77523231	(24467958)	+	(AT)n	Simple_repeat	1	148	(0)	1354201
2730	18.9	3.9	9.7	chr15	77523258	77523501	(24467688)	+	L1MC4	LINE/L1	7283	7527	(515)	1354198
2175	9.8	0.0	3.3	chr15	77523502	77523807	(24467382)	C	AluY	SINE/Alu	(15)	296	1	1354202
1945	16.5	0.7	0.0	chr15	78432434	78432730	(23558459)	+	AluJr	SINE/Alu	1	299	(13)	1355884
24	0.0	0.0	0.0	chr15	78432797	78432822	(23558367)	+	(A)n	Simple_repeat	1	26	(0)	1355885
1524	23.5	1.0	9.5	chr15	78432840	78433366	(23557823)	+	L1MC4	LINE/L1	7408	7889	(153)	1355886
2644	18.2	10.3	3.8	chr15	89710688	89711376	(12279813)	+	L1MC5a	LINE/L1	1629	2367	(410)	1374720
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
1525	26.8	11.5	1.8	chr15	90991632	90992398	(10998791)	+	L2a	LINE/L2	2552	3411	(15)	1377482
2295	15.7	1.9	0.6	chr15	91639988	91640347	(10350842)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1378601
4090	21.9	4.8	4.1	chr15	91640348	91641008	(10350181)	+	L1MC4	LINE/L1	7386	8037	(5)	1378600
198	32.1	11.7	0.0	chr15	92097418	92097523	(9893666)	+	L2c	LINE/L2	3005	3124	(263)	1379372
226	26.6	5.9	0.0	chr15	97859690	97859753	(4131436)	+	MIR	SINE/MIR	120	187	(75)	1387760
188	32.9	11.1	4.1	chr15	97859804	97860120	(4131069)	+	L2a	LINE/L2	2948	3289	(86)	1387761
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
2537	7.0	0.0	0.6	chr16	1476774	1477086	(88861259)	C	AluY	SINE/Alu	(0)	311	1	1395973
2326	11.0	0.0	1.9	chr16	1477087	1477222	(88861123)	C	AluSq2	SINE/Alu	(177)	136	1	1395972
1023	27.0	0.0	1.9	chr16	1477257	1477524	(88860821)	+	L1MC4	LINE/L1	7337	7599	(443)	1395974
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
14	25.3	1.6	4.8	chr16	21599902	21599963	(68738382)	+	G-rich	Low_complexity	1	63	(0)	1438247
3180	17.6	4.7	4.2	chr16	23647410	23647495	(66690850)	C	L1MB4	LINE/L1	(1411)	4735	4661	1442775
2101	11.6	0.3	3.2	chr16	23647496	23647806	(66690539)	C	AluSx	SINE/Alu	(9)	303	2	1442778
197	19.2	3.7	7.1	chr16	25258549	25258604	(65079741)	C	L2a	LINE/L2	(24)	3402	3349	1446591
837	23.7	2.3	3.6	chr16	25258623	25258796	(65079549)	C	LTR73	LTR/ERV1	(18)	554	383	1446592
24	20.8	0.0	1.8	chr16	30335132	30335188	(60003157)	+	GA-rich	Low_complexity	1	57	(0)	1457788
16	19.9	0.0	0.0	chr16	30335313	30335347	(60002998)	+	GA-rich	Low_complexity	1	35	(0)	1457789
501	26.2	9.7	1.5	chr16	30406862	30407082	(59931263)	+	MIRb	SINE/MIR	12	254	(14)	1457954
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
32	12.8	7.6	1.2	chr16	49855654	49855732	(40482613)	+	(GCTC)n	Simple_repeat	1	85	(0)	1471240
13	13.3	9.3	2.1	chr16	49855794	49855836	(40482509)	+	(CCG)n	Simple_repeat	1	47	(0)	1471241
260	13.6	0.2	0.2	chr16	53052893	53053313	(37285032)	+	(CCT)n	Simple_repeat	1	422	(0)	1477111
16	13.2	0.0	0.0	chr16	53053375	53053399	(37284946)	+	(CA)n	Simple_repeat	1	25	(0)	1477112
78	28.1	1.3	1.3	chr16	53903893	53904125	(36434220)	+	(TA)n	Simple_repeat	1	236	(0)	1478628
406	20.8	10.2	0.0	chr16	53904136	53904241	(36434104)	C	L1ME4b	LINE/L1	(619)	273	156	1478625
289	33.3	8.7	1.6	chr16	53904242	53904369	(36433976)	C	MIRb	SINE/MIR	(117)	151	7	1478629
1058	29.4	9.3	1.4	chr16	68553068	68553611	(21784734)	C	L2a	LINE/L2	(15)	3411	2816	1503758
1990	15.7	0.0	1.9	chr16	68553612	68553923	(21784422)	C	AluJr4	SINE/Alu	(5)	307	2	1503759
2207	25.3	7.7	4.6	chr16	68817390	68817956	(21520389)	+	L1MC4	LINE/L1	7182	7789	(253)	1504418
1045	16.0	2.3	1.2	chr16	69812478	69812646	(20525699)	C	AluJb	SINE/Alu	(13)	299	129	1506642
2229	21.3	5.7	3.0	chr16	69812650	69813161	(20525184)	C	L1MC4	LINE/L1	(497)	7545	7009	1506640
2018	21.7	10.0	9.4	chr16	71622502	71622931	(18715414)	+	L1MC4	LINE/L1	7098	7565	(477)	1510039
2317	9.7	1.3	0.0	chr16	71622932	71623239	(18715106)	+	AluSz6	SINE/Alu	1	312	(0)	1510041
334	23.1	10.2	7.2	chr16	74529452	74529713	(15808632)	C	L1MEg	LINE/L1	(5255)	881	610	1514847
2015	13.0	4.2	0.0	chr16	74529810	74530102	(15808243)	C	AluSx	SINE/Alu	(5)	307	2	1514863
3585	24.4	6.9	7.6	chr16	74790111	74790873	(15547472)	C	L1MC4	LINE/L1	(362)	7680	6929	1515456
319	23.9	14.6	1.0	chr16	79472920	79473098	(10865247)	C	L2a	LINE/L2	(75)	3351	3180	1523623
1712	22.0	3.7	4.3	chr16	81332644	81332957	(9005388)	C	L1MC4a	LINE/L1	(248)	7634	7321	1527066
2347	9.3	0.3	1.3	chr16	81332958	81333259	(9005086)	+	AluSc8	SINE/Alu	1	299	(12)	1527067
3103	27.7	8.1	5.8	chr16	84384089	84384729	(5953616)	C	L1MC4	LINE/L1	(230)	7812	7148	1532730
2202	16.4	3.8	2.4	chr16	84384730	84384768	(5953577)	C	MSTA	LTR/ERVL-MaLR	(3)	425	395	1532732
2028	20.2	3.8	1.6	chr16	89211149	89211635	(1126710)	C	MER54B	LTR/ERVL	(0)	793	296	1540916
1290	16.4	0.0	5.8	chr16	89211677	89211767	(1126578)	C	AluSx1	SINE/Alu	(99)	213	134	1540917
2684	3.9	0.0	0.0	chr16	89211768	89212073	(1126272)	C	AluYm1	SINE/Alu	(4)	307	2	1540918
2159	12.6	0.7	0.3	chr17	2515678	2515978	(80741463)	+	AluSx1	SINE/Alu	4	305	(7)	1549287
351	31.9	7.0	4.8	chr17	2515979	2516052	(80741389)	C	MamGypLTR3a	LTR/Gypsy	(784)	197	121	1549286
596	18.1	0.0	3.7	chr17	2516072	2516180	(80741261)	C	AluJb	SINE/Alu	(6)	306	202	1549288
719	12.6	0.0	0.0	chr17	2516180	2516282	(80741159)	+	AluSx3	SINE/Alu	198	300	(11)	1549289
1730	18.0	1.4	7.7	chr17	19558179	19558455	(63698986)	C	L1MC4	LINE/L1	(407)	7635	7382	1580855
1629	17.0	7.4	0.3	chr17	19558456	19558743	(63698698)	C	AluJr	SINE/Alu	(2)	310	1	1580856
1994	9.0	11.2	0.4	chr17	20718431	20718708	(62538733)	C	AluSx1	SINE/Alu	(0)	312	1	1582955
3176	17.6	14.1	10.1	chr17	20718709	20719187	(62538254)	C	L1MC4	LINE/L1	(202)	7840	7238	1582953
2297	11.7	0.0	0.0	chr17	20719188	20719495	(62537946)	C	AluSx	SINE/Alu	(4)	308	1	1582956
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1949	15.1	1.0	0.3	chr17	27925436	27925733	(55331708)	C	AluJr	SINE/Alu	(12)	300	1	1587698
1994	22.8	6.3	3.3	chr17	27925734	27925989	(55331452)	+	L1MC4	LINE/L1	7316	7589	(453)	1587697
2304	11.4	0.0	0.0	chr17	27925990	27926288	(55331153)	+	AluSx3	SINE/Alu	1	299	(12)	1587699
18	25.5	1.6	3.1	chr17	30600796	30600859	(52656582)	+	(CCG)n	Simple_repeat	1	65	(0)	1592819
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
1923	16.4	0.7	0.0	chr17	39413269	39413560	(43843881)	C	AluSz	SINE/Alu	(18)	294	1	1610017
899	23.0	0.0	0.6	chr17	39413585	39413762	(43843679)	+	AluJb	SINE/Alu	134	310	(2)	1610018
18	14.9	0.0	2.6	chr17	56593716	56593754	(26663687)	+	(CGC)n	Simple_repeat	1	39	(0)	1641537
3307	17.5	13.7	10.4	chr17	59928650	59929126	(23328315)	C	L1MC4	LINE/L1	(202)	7840	7238	1648281
1932	10.3	10.5	0.0	chr17	59929127	59929398	(23328043)	C	AluSx	SINE/Alu	(8)	304	1	1648284
2246	10.4	0.0	0.0	chr17	62244168	62244455	(21012986)	+	AluSx	SINE/Alu	1	288	(24)	1652602
28	0.0	0.0	0.0	chr17	62244457	62244482	(21012959)	+	(AAC)n	Simple_repeat	1	26	(0)	1652603
3472	16.8	14.1	8.0	chr17	62244483	62244961	(21012480)	+	L1MC4	LINE/L1	7238	7840	(202)	1652601
2473	25.0	4.9	3.6	chr17	77658573	77659089	(5598352)	+	L1MC4	LINE/L1	7211	7734	(308)	1680406
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2276	24.1	12.1	2.6	chr18	793738	794496	(79578789)	+	L1MC4	LINE/L1	6883	7723	(319)	1690472
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
38	14.8	8.8	3.4	chr18	25351013	25351148	(55022137)	+	(CGCGCTC)n	Simple_repeat	1	148	(0)	1719212
19	10.4	0.0	0.0	chr18	25351150	25351180	(55022105)	+	(CGG)n	Simple_repeat	1	31	(0)	1719213
25	28.2	0.0	0.0	chr18	25351221	25351283	(55022002)	+	GA-rich	Low_complexity	1	63	(0)	1719214
12	17.0	7.5	0.0	chr18	26656783	26656822	(53716463)	+	G-rich	Low_complexity	1	43	(0)	1721303
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
12	20.5	2.9	0.0	chr18	34159896	34159929	(46213356)	+	G-rich	Low_complexity	1	35	(0)	1731584
27	13.7	3.5	1.7	chr18	35581439	35581496	(44791789)	+	(CGC)n	Simple_repeat	1	60	(0)	1733545
848	27.8	15.4	2.3	chr18	38322550	38322903	(42050382)	C	MLT1E3	LTR/ERVL-MaLR	(3)	621	213	1737224
1412	23.9	6.5	5.6	chr18	38322905	38323441	(42049844)	+	L1MC4	LINE/L1	7381	7922	(120)	1737223
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
2859	16.1	6.1	1.1	chr18	52792954	52793481	(27579804)	C	LTR9	LTR/ERV1	(56)	556	1	1758955
2891	21.2	4.3	2.6	chr18	57045517	57046232	(23327053)	C	L1MC4a	LINE/L1	(6)	7876	7149	1764978
255	26.4	10.7	0.7	chr18	74182339	74182540	(6190745)	C	LTR16E1	LTR/ERVL	(10)	479	245	1789532
18	4.7	0.0	0.0	chr18	74551910	74551931	(5821354)	+	(A)n	Simple_repeat	1	22	(0)	1790033
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
60	3.3	0.0	0.0	chr19	1164388	1164449	(57453167)	+	(AGG)n	Simple_repeat	1	62	(0)	1798306
44	4.2	0.0	0.0	chr19	1164504	1164552	(57453064)	+	(AGG)n	Simple_repeat	1	49	(0)	1798306
217	15.1	0.5	1.3	chr19	1164604	1164993	(57452623)	+	GA-rich	Low_complexity	1	392	(0)	1798307
29	18.7	2.1	6.3	chr19	1542213	1542305	(57075311)	+	(TTC)n	Simple_repeat	1	95	(0)	1798975
1992	11.9	1.4	1.0	chr19	1542370	1542662	(57074954)	C	AluSq2	SINE/Alu	(19)	294	1	1798976
2253	6.6	0.3	0.7	chr19	2784785	2785072	(55832544)	+	AluSc	SINE/Alu	1	287	(22)	1801655
3951	24.1	10.0	0.7	chr19	4998356	4999597	(53618019)	C	L1MC4	LINE/L1	(2)	8040	6671	1807059
2229	12.1	0.7	0.0	chr19	5354059	5354365	(53263251)	C	AluSz	SINE/Alu	(3)	309	1	1807744
1329	23.6	6.7	1.5	chr19	5354366	5354825	(53262791)	C	L2a	LINE/L2	(289)	3137	2644	1807743
27	6.1	0.0	0.0	chr19	6476511	6476545	(52141071)	+	(CTGAGTCC)n	Simple_repeat	1	35	(0)	1810329
635	29.8	9.6	1.4	chr19	6520249	6520459	(52097157)	C	MIR	SINE/MIR	(16)	246	17	1810464
425	17.6	0.0	0.0	chr19	6520593	6520660	(52096956)	+	AluJo	SINE/Alu	2	69	(243)	1810465
2422	8.1	0.0	1.0	chr19	6520730	6521038	(52096578)	C	AluSx1	SINE/Alu	(6)	306	1	1810466
592	20.7	7.8	3.8	chr19	8356160	8356353	(50261263)	+	L1MC4	LINE/L1	7390	7569	(473)	1815115
1055	16.1	0.0	0.0	chr19	8356358	8356512	(50261104)	+	AluJb	SINE/Alu	134	288	(24)	1815116
560	18.6	1.7	3.7	chr19	8356525	8356658	(50260958)	+	FLAM_C	SINE/Alu	20	209	(93)	1815117
2011	8.3	6.7	0.0	chr19	14235226	14235489	(44382127)	+	AluSq4	SINE/Alu	1	283	(28)	1828904
53	0.0	0.0	0.0	chr19	14235490	14235537	(44382079)	+	(AAAT)n	Simple_repeat	1	48	(0)	1828905
98	36.1	1.4	3.8	chr19	14763553	14764069	(43853547)	+	(TTC)n	Simple_repeat	1	524	(0)	1830327
1108	19.4	1.0	3.7	chr19	14764070	14764285	(43853331)	C	AluJr	SINE/Alu	(19)	293	84	1830328
1087	23.7	4.3	3.4	chr19	15205881	15206203	(43411413)	C	L1MC4	LINE/L1	(408)	7634	7309	1831365
952	33.8	1.6	1.1	chr19	16275661	16276025	(42341591)	C	L1MC4	LINE/L1	(308)	7734	7368	1833565
25	12.9	0.0	0.0	chr19	16276026	16276068	(42341548)	+	(TTCT)n	Simple_repeat	1	43	(0)	1833566
2295	10.0	3.5	0.0	chr19	16276069	16276368	(42341248)	C	AluSx1	SINE/Alu	(1)	311	1	1833567
2374	7.3	0.0	0.0	chr19	17009503	17009791	(41607825)	+	AluY	SINE/Alu	11	299	(12)	1835288
1658	28.2	4.0	5.5	chr19	17009792	17010221	(41607395)	+	L1MC4	LINE/L1	7333	7774	(268)	1835289
208	25.8	7.0	0.0	chr19	35495731	35495823	(23121793)	C	L2b	LINE/L2	(34)	3341	3242	1860545
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
3859	19.6	4.1	3.6	chr19	40138559	40139078	(18478538)	+	L1MC4a	LINE/L1	7035	7557	(325)	1870287
1756	16.8	2.1	0.7	chr19	40139079	40139358	(18478258)	+	AluJr4	SINE/Alu	5	288	(24)	1870289
1215	13.4	0.2	0.0	chr19	44410766	44412174	(14205442)	+	ACRO1	Satellite/acro	1	1411	(0)	1878697
2570	6.2	0.0	0.0	chr19	44769269	44769573	(13848043)	C	AluY	SINE/Alu	(0)	311	7	1879572
194	25.0	2.0	0.0	chr19	44769627	44769674	(13847942)	C	MIR3	SINE/MIR	(61)	147	99	1879573
1085	22.5	8.4	2.0	chr19	44769711	44770207	(13847409)	+	L1MC4	LINE/L1	7336	7873	(9)	1879574
2334	11.4	1.0	0.0	chr19	49216987	49217294	(9400322)	C	AluSx	SINE/Alu	(0)	312	2	1890626
1311	32.4	6.0	3.9	chr19	49217295	49217370	(9400246)	+	ERVL-E-int	LTR/ERVL	3532	3606	(2061)	1890621
387	24.3	10.1	0.0	chr19	49217372	49217478	(9400138)	+	LTR50	LTR/ERVL	354	472	(323)	1890618
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
2364	7.4	2.9	0.3	chr2	3185637	3185935	(239007594)	+	AluSx	SINE/Alu	2	308	(4)	1914167
74	13.2	0.0	3.0	chr2	4410126	4410260	(237783269)	+	(CCTC)n	Simple_repeat	1	135	(0)	1915708
32544	20.9	1.9	1.6	chr2	6838364	6846789	(235346740)	C	HUERS-P3-int	LTR/ERV1	(224)	8695	262	1919104
2230	10.8	0.0	0.3	chr2	27714705	27715009	(214478520)	+	AluSz	SINE/Alu	5	308	(4)	1952332
299	18.6	0.0	0.0	chr2	27715224	27715282	(214478247)	+	Charlie4z	DNA/hAT-Charlie	94	152	(15)	1952333
12	24.8	0.0	2.5	chr2	27715771	27715810	(214477719)	+	G-rich	Low_complexity	1	40	(0)	1952334
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
28	0.0	3.3	0.0	chr2	42810107	42810136	(199383393)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1976361
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
433	29.2	5.8	2.0	chr2	46020851	46021049	(196172480)	C	MIRb	SINE/MIR	(15)	253	47	1981617
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
2156	10.7	4.0	0.0	chr2	54549019	54549309	(187644220)	+	AluSq2	SINE/Alu	1	303	(10)	1994549
397	10.8	17.8	0.0	chr2	54549351	54549433	(187644096)	C	L1MB2	LINE/L1	(298)	5873	5773	1994550
235	32.2	6.1	3.6	chr2	54549435	54549587	(187643942)	C	MIR1_Amn	SINE/MIR	(41)	167	19	1994551
2962	24.8	6.4	2.7	chr2	59210884	59212084	(182981445)	C	L1MC4	LINE/L1	(1)	8041	6684	2000826
1797	20.9	10.3	1.3	chr2	59800101	59800722	(182392807)	C	L1MC4	LINE/L1	(0)	7882	7202	2001588
520	28.8	4.8	2.2	chr2	59800723	59800903	(182392626)	C	MIRb	SINE/MIR	(32)	236	51	2001589
1292	23.0	8.2	2.2	chr2	61620449	61620768	(180572761)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	251	2004765
502	20.9	0.0	0.0	chr2	61620770	61620855	(180572674)	C	MLT1G-int	LTR/ERVL-MaLR	(1315)	94	9	2004765
1008	28.7	10.6	1.4	chr2	61620867	61621257	(180572272)	C	MLT1G	LTR/ERVL-MaLR	(14)	541	129	2004765
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2929	20.9	5.7	4.6	chr2	132886174	132886790	(109306739)	C	L1MC4	LINE/L1	(11)	8031	7386	2105187
1140	15.2	5.5	2.2	chr2	132886791	132887018	(109306511)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	2105188
2929	20.9	5.7	4.6	chr2	132887019	132887289	(109306240)	C	L1MC4	LINE/L1	(657)	7385	7134	2105187
1757	25.8	1.7	0.0	chr2	133783422	133783875	(108409654)	+	L1MC4	LINE/L1	7217	7678	(364)	2106454
2370	9.6	0.3	0.0	chr2	151647116	151647408	(90546121)	C	AluSq2	SINE/Alu	(18)	295	2	2131177
2444	21.4	7.9	5.7	chr2	151647409	151648215	(90545314)	+	L1MC4	LINE/L1	7225	8042	(0)	2131178
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
19	25.0	1.2	5.8	chr2	173963715	173963799	(68229730)	+	(GGCGGC)n	Simple_repeat	1	86	(0)	2162453
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
1567	26.3	7.5	7.6	chr2	178014880	178015749	(64177780)	+	L1MC4	LINE/L1	7040	7884	(158)	2168423
339	27.0	13.9	10.2	chr2	191245109	191245343	(50948186)	+	L1M4b	LINE/L1	411	655	(6212)	2185587
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
1081	12.8	3.9	2.8	chr2	218334479	218334658	(23858871)	+	AluJr	SINE/Alu	111	292	(20)	2225893
1045	16.3	9.1	0.9	chr2	218334663	218334885	(23858644)	C	L1MC4a	LINE/L1	(416)	7466	7224	2225892
909	21.1	1.0	2.5	chr2	218334952	218335195	(23858334)	+	AluJr	SINE/Alu	87	312	(0)	2225894
4331	8.2	2.4	0.0	chr2	234532542	234533118	(7660411)	+	LTR10C	LTR/ERV1	1	591	(0)	2252128
3100	11.3	2.1	2.9	chr2	234533119	234533352	(7660177)	+	L1PB2	LINE/L1	5921	6150	(1)	2252126
3097	24.9	8.3	4.6	chr2	238994338	238995399	(3198130)	+	L1MC4	LINE/L1	6421	7600	(442)	2258476
2542	13.2	8.4	0.9	chr2	238995400	238995851	(3197678)	+	L1MB3	LINE/L1	5695	6183	(0)	2258477
1294	3.7	1.8	0.0	chr2	240417564	240417727	(1775802)	C	L1PA4	LINE/L1	(0)	6155	5989	2260032
806	26.0	9.5	5.5	chr20	473028	473389	(63970778)	C	L1MCa	LINE/L1	(5230)	1193	816	2262999
865	22.2	2.5	1.5	chr20	837921	838048	(63606119)	+	L1MC4	LINE/L1	7282	7413	(629)	2263850
826	20.4	5.6	0.0	chr20	838049	838200	(63605967)	+	FRAM	SINE/Alu	4	164	(12)	2263851
865	22.2	2.5	1.5	chr20	838201	838272	(63605895)	+	L1MC4	LINE/L1	7414	7484	(558)	2263850
23	10.6	2.4	0.0	chr20	838279	838319	(63605848)	+	(CTTT)n	Simple_repeat	1	42	(0)	2263852
512	26.5	13.4	2.6	chr20	838465	838816	(63605351)	C	L2b	LINE/L2	(105)	3270	2881	2263853
1896	24.3	1.8	1.0	chr20	16644974	16645468	(47798699)	C	L1MC4a	LINE/L1	(0)	7882	7384	2289697
577	26.9	7.5	2.5	chr20	16645474	16645675	(47798492)	C	MER58C	DNA/hAT-Charlie	(0)	215	3	2289698
2313	10.9	0.3	0.0	chr20	18586603	18586904	(45857263)	+	AluSp	SINE/Alu	1	303	(10)	2292937
1069	12.8	6.3	1.2	chr20	18586905	18587112	(45857055)	C	L1MC4	LINE/L1	(311)	7571	7339	2292935
201	27.1	6.0	3.6	chr20	18587269	18587402	(45856765)	C	MIRc	SINE/MIR	(0)	268	125	2292938
1328	26.4	5.7	7.9	chr20	23651984	23652604	(40791563)	C	L1MC4	LINE/L1	(213)	7829	7208	2299974
21	30.9	1.4	0.0	chr20	25867722	25867792	(38576375)	+	GA-rich	Low_complexity	1	72	(0)	2302877
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
269	28.6	12.5	5.2	chr20	31517426	31517713	(32926454)	C	L2b	LINE/L2	(10)	3365	3054	2306158
2384	18.4	9.1	10.2	chr20	37254505	37255291	(27188876)	+	L1MC4	LINE/L1	7265	8042	(0)	2319586
3656	19.3	3.4	7.1	chr20	39798960	39799919	(24644248)	C	L1MC4	LINE/L1	(0)	8042	7120	2324739
6468	20.5	7.4	1.3	chr20	41464277	41465774	(22978393)	+	L1MC4a	LINE/L1	6261	7856	(26)	2327581
2180	8.9	1.7	0.0	chr20	63722643	63722924	(721243)	C	AluSx1	SINE/Alu	(19)	293	7	2369935
4174	21.9	10.9	14.3	chr20	63723666	63723796	(720371)	C	L1M4a1	LINE/L1	(393)	2186	2057	2369934
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
15708	0.1	0.0	0.0	chr21	8436876	8438744	(38271239)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373613
13	8.1	3.6	3.5	chr21	8438766	8438793	(38271190)	+	(CCG)n	Simple_repeat	1	29	(0)	2373614
12	18.8	2.6	2.6	chr21	8438825	8438862	(38271121)	+	(CGCGTG)n	Simple_repeat	1	39	(0)	2373615
16	8.3	0.0	0.0	chr21	8438857	8438882	(38271101)	+	(CGTT)n	Simple_repeat	1	26	(0)	2373616
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1850	13.3	3.4	1.1	chr21	9356048	9356332	(37353651)	C	AluSg7	SINE/Alu	(17)	292	1	2374459
12218	15.8	5.4	4.3	chr21	9356333	9357189	(37352794)	C	Tigger1	DNA/TcMar-Tigger	(786)	1632	757	2374457
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
543	28.6	6.4	2.8	chr21	32916429	32916640	(13793343)	+	MIRb	SINE/MIR	15	234	(34)	2403992
239	28.8	9.7	3.5	chr21	32916717	32916860	(13793123)	+	MIRb	SINE/MIR	16	169	(99)	2403993
1040	18.4	1.1	0.0	chr21	32916911	32917089	(13792894)	+	MER20	DNA/hAT-Charlie	39	219	(0)	2403994
2021	11.2	0.3	3.3	chr21	33586635	33586939	(13123044)	C	AluSx3	SINE/Alu	(15)	296	1	2405242
4127	21.1	9.1	2.2	chr21	37695748	37696825	(9013158)	+	L1MC4	LINE/L1	6760	7918	(124)	2411991
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
1349	20.7	0.4	5.9	chr22	10708283	10708552	(40109916)	C	AluJr	SINE/Alu	(56)	256	2	2424540
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2264	11.5	1.0	1.0	chr22	23564972	23565283	(27253185)	+	AluSx	SINE/Alu	1	312	(0)	2438494
335	34.3	4.5	1.8	chr22	23565343	23565512	(27252956)	C	MIR3	SINE/MIR	(24)	184	5	2438495
15	26.9	3.3	1.6	chr22	23565552	23565612	(27252856)	+	(CCCTCT)n	Simple_repeat	1	63	(0)	2438496
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2504	5.7	0.0	0.3	chr22	38342231	38342526	(12475942)	C	AluY	SINE/Alu	(16)	295	1	2469318
1014	19.8	1.5	18.1	chr22	38342527	38342742	(12475726)	C	L1MC5a	LINE/L1	(643)	2134	1925	2469314
2290	11.0	0.3	0.3	chr22	38342777	38343085	(12475383)	+	AluSx1	SINE/Alu	4	312	(0)	2469319
1972	16.3	0.3	0.0	chr22	40716850	40717156	(10101312)	C	AluSz	SINE/Alu	(0)	312	5	2474184
1872	16.3	0.5	1.2	chr22	40717161	40717586	(10100882)	C	L1M2	LINE/L1	(684)	5607	5182	2474185
2698	21.4	10.1	3.9	chr3	14208474	14209307	(184086252)	+	L1MC4	LINE/L1	7042	8041	(1)	2516467
2757	19.0	14.6	3.4	chr3	37846952	37847708	(160447851)	+	L1MC4a	LINE/L1	7185	8040	(2)	2552161
13	26.5	0.0	6.6	chr3	64687713	64687773	(133607786)	+	(GGC)n	Simple_repeat	1	61	(0)	2596144
22	9.5	0.0	0.0	chr3	64687877	64687910	(133607649)	+	(AGG)n	Simple_repeat	1	34	(0)	2596145
15	19.7	0.0	0.0	chr3	64688033	64688061	(133607498)	+	G-rich	Low_complexity	1	29	(0)	2596146
22	22.9	8.4	2.6	chr3	64688372	64688478	(133607081)	+	(CT)n	Simple_repeat	1	116	(0)	2596147
16	21.6	1.7	5.0	chr3	69013317	69013375	(129282184)	+	G-rich	Low_complexity	1	60	(0)	2603323
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
20	28.7	2.8	0.0	chr3	105366924	105366995	(92928564)	+	(CCG)n	Simple_repeat	1	74	(0)	2648181
21	3.3	0.0	3.0	chr3	105869047	105869079	(92426480)	+	(CGGGG)n	Simple_repeat	1	33	(0)	2648801
34	17.1	0.0	0.0	chr3	107525317	107525378	(90770181)	+	GA-rich	Low_complexity	1	62	(0)	2651005
3657	24.1	9.0	2.7	chr3	115584258	115585405	(82710154)	+	L1MC4	LINE/L1	6808	8039	(3)	2662316
1079	34.7	10.4	3.9	chr3	123200502	123201460	(75094099)	+	L2b	LINE/L2	2341	3375	(0)	2673333
14	15.3	2.6	2.6	chr3	141402302	141402339	(56893220)	+	G-rich	Low_complexity	1	39	(0)	2702239
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
4916	19.9	4.5	1.9	chr3	143141195	143142105	(55153454)	C	L1MC4a	LINE/L1	(0)	7882	6963	2705253
34	27.5	1.6	2.4	chr3	158105768	158105890	(40189669)	+	(CCG)n	Simple_repeat	1	125	(0)	2726362
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
571	27.2	2.4	0.0	chr4	4841066	4841227	(185373328)	C	MER5A	DNA/hAT-Charlie	(0)	189	24	2795572
262	32.2	1.1	4.3	chr4	4841230	4841323	(185373232)	C	MIRb	SINE/MIR	(100)	168	78	2795573
16	24.4	3.5	5.6	chr4	7042373	7042458	(183172097)	+	(CCTCTC)n	Simple_repeat	1	89	(0)	2799507
18	18.6	0.0	0.0	chr4	7042780	7042816	(183171739)	+	(CTC)n	Simple_repeat	1	37	(0)	2799508
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
1218	20.6	7.4	16.3	chr4	76521837	76522432	(113692123)	+	L1MC4	LINE/L1	7353	7891	(151)	2899390
470	25.6	11.0	5.2	chr4	82719039	82719343	(107495212)	+	Charlie8	DNA/hAT-Charlie	3	314	(17)	2908105
29	0.0	0.0	0.0	chr4	98261351	98261378	(91953177)	+	(CCCGC)n	Simple_repeat	1	28	(0)	2929922
2640	26.6	6.1	1.9	chr4	100019661	100020689	(90193866)	C	L1MC4	LINE/L1	(178)	7864	6790	2932484
13	20.7	2.1	4.1	chr4	102827165	102827212	(87387343)	+	(CGCGCC)n	Simple_repeat	1	49	(0)	2936199
11	16.4	5.9	0.0	chr4	109560059	109560092	(80654463)	+	(GCTCTC)n	Simple_repeat	1	36	(0)	2945187
16	0.0	0.0	0.0	chr4	109560093	109560110	(80654445)	+	(T)n	Simple_repeat	1	18	(0)	2945188
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
2222	10.1	0.3	2.0	chr4	118264984	118265280	(71949275)	+	AluSc	SINE/Alu	2	293	(16)	2956637
856	29.5	11.1	2.9	chr4	118265281	118265367	(71949188)	+	L2a	LINE/L2	2715	2802	(617)	2956636
8853	7.9	14.5	1.0	chr4	118265368	118266730	(71947825)	+	LTR12C	LTR/ERV1	3	1579	(0)	2956638
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
60	3.3	0.0	0.0	chr4	150253071	150253133	(39961422)	+	(TCCTCCTCA)n	Simple_repeat	1	63	(0)	2999523
1969	22.0	6.5	7.7	chr4	169892133	169892483	(20322072)	C	L1MC4	LINE/L1	(310)	7732	7371	3027035
2162	13.6	0.7	0.3	chr4	169892535	169892842	(20321713)	C	AluSq2	SINE/Alu	(4)	309	1	3027038
4171	23.8	8.0	3.9	chr4	174660114	174661387	(15553168)	C	L1MC4	LINE/L1	(239)	7803	6472	3033252
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
16456	18.8	3.1	2.8	chr4	190011543	190014763	(199792)	+	L1M1	LINE/L1	24	3254	(4311)	3054511
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
263	24.6	0.0	0.0	chr5	10287114	10287170	(171251089)	C	Tigger16a	DNA/TcMar-Tigger	(40)	917	861	3066617
2322	12.1	3.8	1.0	chr5	10287188	10287572	(171250687)	+	L1PB3	LINE/L1	5685	6080	(74)	3066618
122	13.9	0.5	1.0	chr5	41312529	41312736	(140225523)	+	(TTCC)n	Simple_repeat	1	209	(0)	3110264
42	15.6	2.3	1.1	chr5	95284570	95284656	(86253603)	+	(CTC)n	Simple_repeat	1	89	(0)	3180924
22	9.5	0.0	0.0	chr5	95284666	95284699	(86253560)	+	(GCG)n	Simple_repeat	1	34	(0)	3180925
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
23	32.2	1.0	1.9	chr5	119268626	119268728	(62269531)	+	(CCCGC)n	Simple_repeat	1	104	(0)	3212077
23	17.1	0.0	0.0	chr5	129461452	129461497	(52076762)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	3225348
14212	8.2	0.4	0.1	chr5	132345557	132345914	(49192345)	C	L1P2	LINE/L1	(2093)	4226	3869	3229238
192	29.0	6.6	1.9	chr5	151741013	151741126	(29797133)	C	MIR1_Amn	SINE/MIR	(62)	168	46	3262533
191	26.0	9.9	5.2	chr5	151741086	151741162	(29797097)	+	L2c	LINE/L2	3289	3369	(18)	3262534
183	35.4	11.9	0.0	chr5	156026439	156026534	(25511725)	C	MIRc	SINE/MIR	(147)	121	13	3270219
809	24.9	6.4	1.0	chr5	156026814	156027020	(25511239)	C	MER58A	DNA/hAT-Charlie	(0)	224	6	3270220
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
2367	22.9	3.5	8.2	chr5	172883144	172883699	(8654560)	C	L1MC4a	LINE/L1	(0)	7882	7337	3298430
1839	13.0	2.1	1.1	chr5	172883700	172883976	(8654283)	+	AluJb	SINE/Alu	1	280	(32)	3298431
22	18.0	2.6	6.2	chr5	173056577	173056654	(8481605)	+	G-rich	Low_complexity	1	80	(0)	3298842
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2356	19.5	4.8	3.3	chr5	178858901	178859711	(2678548)	C	L1MA9	LINE/L1	(534)	5778	4872	3309952
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
413	20.9	0.0	4.4	chr5	180500003	180500092	(1038167)	C	Tigger9b	DNA/TcMar-Tigger	(510)	114	29	3312788
1500	18.3	8.0	1.0	chr5	180500123	180500411	(1037848)	C	AluJo	SINE/Alu	(1)	311	1	3312789
1390	9.0	1.7	0.0	chr5	180500426	180500603	(1037656)	C	AluYh3	SINE/Alu	(0)	311	131	3312790
2196	10.1	1.7	0.0	chr6	3434335	3434621	(167371358)	+	AluSg	SINE/Alu	2	293	(17)	3318881
2740	20.9	5.7	3.2	chr6	8822732	8823415	(161982564)	+	L1MC4	LINE/L1	7121	7822	(220)	3327247
2865	21.4	2.5	2.6	chr6	15638418	15638838	(155167141)	+	L1MC4	LINE/L1	7126	7554	(488)	3338188
991	18.4	3.1	0.0	chr6	15638839	15638996	(155166983)	C	AluJb	SINE/Alu	(13)	299	137	3338190
1473	20.1	7.9	0.0	chr6	15638999	15639326	(155166653)	+	L1MC4	LINE/L1	7527	7882	(0)	3338188
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
2016	21.6	6.8	3.5	chr6	26027599	26028082	(144777897)	+	MER34	LTR/ERV1	42	542	(0)	3354513
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
1105	17.2	4.1	5.0	chr6	108728905	108729124	(62076855)	+	MER20	DNA/hAT-Charlie	2	219	(0)	3471053
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
2786	26.4	9.5	1.0	chr6	153260533	153261080	(17544899)	+	L1MC4	LINE/L1	6857	7448	(594)	3534669
270	23.3	8.2	0.0	chr6	153261084	153261173	(17544806)	+	L1MC4	LINE/L1	7920	8017	(25)	3534669
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
21	25.5	7.1	3.0	chr7	27168832	27168957	(132177016)	+	GA-rich	Low_complexity	1	135	(0)	3598074
47	0.0	0.0	0.0	chr7	27169094	27169133	(132176840)	+	(GT)n	Simple_repeat	1	40	(0)	3598075
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2965	13.3	1.4	0.4	chr7	64666677	64667158	(94678815)	C	MER57E3	LTR/ERV1	(0)	487	1	3646565
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
440	7.8	6.3	0.4	chr7	66098890	66099632	(93246341)	+	(AGG)n	Simple_repeat	1	790	(0)	3649224
22	11.9	0.0	0.0	chr7	66099714	66099750	(93246223)	+	(AGG)n	Simple_repeat	1	37	(0)	3649225
19	10.5	0.0	0.0	chr7	66099784	66099814	(93246159)	+	(AGG)n	Simple_repeat	1	31	(0)	3649225
30	0.0	0.0	0.0	chr7	66100213	66100240	(93245733)	+	(AGG)n	Simple_repeat	1	28	(0)	3649226
12	5.6	0.0	0.0	chr7	66100275	66100293	(93245680)	+	(AGG)n	Simple_repeat	1	19	(0)	3649226
20	5.3	10.0	0.0	chr7	66100325	66100364	(93245609)	+	GA-rich	Low_complexity	1	44	(0)	3649227
1294	17.3	7.4	3.2	chr7	66100374	66100656	(93245317)	+	AluSc8	SINE/Alu	2	297	(14)	3649228
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
388	12.8	12.8	1.8	chr7	112343396	112343506	(47002467)	C	L1MC5	LINE/L1	(238)	9066	8942	3725645
2416	17.4	8.1	4.2	chr7	112343530	112343644	(47002329)	+	L1MC4	LINE/L1	7404	7515	(527)	3725646
2189	14.3	0.3	0.0	chr7	112343645	112343951	(47002022)	+	AluSz6	SINE/Alu	1	308	(4)	3725647
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
2244	11.4	0.0	3.2	chr7	127672324	127672638	(31673335)	+	AluSz	SINE/Alu	4	308	(4)	3746095
1471	23.4	11.9	5.9	chr7	127672639	127673052	(31672921)	C	L1MC4	LINE/L1	(273)	7769	7288	3746091
1618	12.2	1.0	1.0	chr7	132561275	132564422	(26781551)	+	(CCT)n	Simple_repeat	1	3179	(0)	3754576
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
2641	17.6	3.4	5.0	chr7	140215643	140216208	(19129765)	+	L1MC4	LINE/L1	7258	7814	(228)	3766907
15	16.9	4.0	3.9	chr7	148883813	148883863	(10462110)	+	(CCCCGG)n	Simple_repeat	1	51	(0)	3779538
29	22.4	2.9	7.1	chr7	148884095	148884231	(10461742)	+	(CGC)n	Simple_repeat	1	141	(0)	3779539
1597	22.6	5.4	0.7	chr7	151894015	151894437	(7451536)	+	MLT1C	LTR/ERVL-MaLR	1	444	(23)	3784195
1093	9.7	0.0	1.4	chr7	152680479	152680622	(6665351)	C	AluSx	SINE/Alu	(169)	143	2	3785729
2031	20.7	4.2	5.7	chr7	152680623	152680893	(6665080)	+	L1MC4a	LINE/L1	7330	7590	(452)	3785722
2017	14.1	0.0	0.0	chr7	152680894	152681183	(6664790)	+	AluSx1	SINE/Alu	1	290	(22)	3785730
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1490	17.5	10.2	1.0	chr8	13030876	13031186	(132107450)	+	MER2	DNA/TcMar-Tigger	1	343	(2)	3812011
24	11.2	4.2	0.0	chr8	23682701	23682748	(121455888)	+	(CTCTGG)n	Simple_repeat	1	50	(0)	3828342
19	28.1	1.5	0.0	chr8	23683118	23683182	(121455454)	+	(TCCCTC)n	Simple_repeat	1	66	(0)	3828343
4161	21.3	14.1	4.3	chr8	56107763	56109113	(89029523)	C	L1MC4	LINE/L1	(67)	7975	6458	3873564
1951	23.9	2.5	6.3	chr8	56239322	56240017	(88898619)	C	L1MC4	LINE/L1	(0)	8042	7374	3873709
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
19	0.0	0.0	0.0	chr8	88327748	88327764	(56810872)	+	(GC)n	Simple_repeat	1	17	(0)	3918473
41	5.7	1.8	1.7	chr8	88327765	88327821	(56810815)	+	(CA)n	Simple_repeat	1	58	(0)	3918474
14	26.7	1.8	1.8	chr8	88327822	88327859	(56810777)	+	(CGCA)n	Simple_repeat	1	38	(0)	3918475
1471	23.8	5.3	5.1	chr8	100936414	100936533	(44202103)	+	L1MC4a	LINE/L1	7369	7483	(399)	3937817
1974	11.3	4.9	1.4	chr8	100936534	100936826	(44201810)	+	AluSx1	SINE/Alu	1	304	(8)	3937818
497	27.8	5.1	12.2	chr8	125000261	125000449	(20138187)	C	L2	LINE/L2	(430)	2989	2820	3974746
2289	7.9	0.3	3.6	chr8	125000450	125000753	(20137883)	C	AluSz	SINE/Alu	(18)	294	1	3974747
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
16	23.2	1.9	1.9	chr9	976573	976624	(137418093)	+	G-rich	Low_complexity	1	53	(0)	4010079
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
1057	27.4	7.2	4.9	chr9	7403914	7404384	(130990333)	+	LTR16C	LTR/ERVL	1	483	(6)	4019690
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
12	15.8	0.0	3.3	chr9	75890707	75890736	(62503981)	+	(GAGC)n	Simple_repeat	1	30	(0)	4091628
13	8.5	4.0	0.0	chr9	75891146	75891170	(62503547)	+	(AGCG)n	Simple_repeat	1	26	(0)	4091629
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
24	21.3	2.5	3.6	chr9	78032030	78032043	(60362674)	+	G-rich	Low_complexity	3	83	(0)	4095149
1757	12.8	2.9	10.1	chr9	78341417	78341752	(60052965)	+	AluJo	SINE/Alu	1	311	(1)	4095616
2670	23.2	4.3	5.2	chr9	78341753	78342078	(60052639)	C	L1MC4	LINE/L1	(497)	7545	7243	4095615
3925	15.2	9.2	4.1	chr9	83386503	83387378	(55007339)	C	L1MC4a	LINE/L1	(0)	7882	6958	4102808
248	12.8	0.0	0.0	chr9	89097642	89097680	(49297037)	C	L2a	LINE/L2	(9)	3417	3379	4112090
2312	21.8	2.9	2.6	chr9	89097977	89098523	(49296194)	+	L1MC4	LINE/L1	7352	7900	(142)	4112091
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
325	33.3	2.6	2.4	chr9	98192889	98193096	(40201621)	+	MIR	SINE/MIR	40	246	(22)	4126037
594	24.9	9.5	0.6	chr9	98193302	98193483	(40201234)	C	MIR	SINE/MIR	(28)	234	35	4126038
2896	20.9	6.5	3.7	chr9	105411492	105412540	(32982177)	C	L1MC4	LINE/L1	(178)	7817	6724	4137507
2144	14.9	0.0	1.3	chr9	124824952	124825267	(13569450)	C	AluSz6	SINE/Alu	(0)	312	1	4173319
3266	19.8	4.9	5.9	chr9	124825268	124825631	(13569086)	C	L1MC4	LINE/L1	(335)	7707	7343	4173317
1696	16.0	0.0	5.4	chr9	124825632	124825817	(13568900)	C	AluJb	SINE/Alu	(7)	305	126	4173320
112	10.2	0.0	0.0	chr9	124825818	124825980	(13568737)	+	(TA)n	Simple_repeat	1	163	(0)	4173321
1729	12.8	5.9	3.6	chr9	127725002	127725282	(10669435)	+	AluSx	SINE/Alu	4	291	(21)	4178872
2661	4.3	0.0	0.0	chr9	127725283	127725586	(10669131)	+	AluY	SINE/Alu	1	304	(7)	4178873
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
255	22.9	1.6	1.6	chr9	129488970	129489031	(8905686)	C	MIR3	SINE/MIR	(66)	142	81	4182954
203	29.9	7.8	5.3	chr9	129489153	129489265	(8905452)	+	MIRc	SINE/MIR	88	203	(65)	4182955
2491	4.7	0.7	0.0	chr9	129489330	129489625	(8905092)	C	AluY	SINE/Alu	(11)	300	3	4182956
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
2091	20.1	6.9	5.7	chrX	9456196	9456624	(146584271)	C	MLT2B1	LTR/ERVL	(65)	455	2	4374831
885	15.9	0.0	4.0	chrX	9456625	9456738	(146584157)	+	MLT1D	LTR/ERVL-MaLR	388	501	(4)	4374828
6517	20.2	6.0	4.5	chrX	21920929	21922485	(134118410)	C	L1MC4	LINE/L1	(256)	7786	6205	4395162
372	18.0	1.0	12.3	chrX	41501950	41502013	(114538882)	+	L1M5	LINE/L1	3918	3978	(2168)	4424564
237	24.1	6.7	1.2	chrX	41502015	41502098	(114538797)	C	LTR67B	LTR/ERVL	(3)	617	529	4424566
2404	15.4	7.8	0.7	chrX	41502107	41502571	(114538324)	+	L1MC4	LINE/L1	7301	7801	(241)	4424567
2507	16.2	2.9	0.9	chrX	71007619	71008065	(85032830)	+	L1MC4	LINE/L1	7171	7626	(416)	4460602
2610	14.2	0.7	0.0	chrX	71008066	71008480	(85032415)	+	L1MB5	LINE/L1	5580	5997	(177)	4460603
356	26.4	6.5	7.5	chrX	123764647	123764925	(32275970)	C	L1M3	LINE/L1	(2660)	3480	3205	4527272
38	0.0	0.0	0.0	chrX	123765232	123765266	(32275629)	+	(CCG)n	Simple_repeat	1	35	(0)	4527273
270	31.7	0.0	1.9	chrX	153668261	153668363	(2372532)	+	L2c	LINE/L2	3273	3373	(14)	4570566
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157