479	19.7	26.8	2.7	chr1	778255	778442	(248177980)	C	FRAM	SINE/Alu	(8)	294	45	999
19	13.0	0.0	6.2	chr1	959305	959352	(247997070)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1202
12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
13	18.8	4.5	2.2	chr1	1116008	1116051	(247840371)	+	(CCCCAGC)n	Simple_repeat	1	46	(0)	1381
15	15.5	7.0	0.0	chr1	1116237	1116279	(247840143)	+	G-rich	Low_complexity	1	46	(0)	1382
2189	8.9	0.0	2.0	chr1	1207835	1208126	(247748296)	+	AluSx	SINE/Alu	10	295	(17)	1470
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
16	22.0	0.0	6.7	chr1	1304981	1305040	(247651382)	+	G-rich	Low_complexity	1	60	(0)	1572
24	23.2	0.0	1.6	chr1	1399243	1399304	(247557118)	+	(CGC)n	Simple_repeat	1	62	(0)	1683
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
2331	11.3	0.0	0.0	chr1	1614735	1615044	(247341378)	+	AluSg	SINE/Alu	1	310	(0)	2065
13	17.1	2.3	4.5	chr1	1615445	1615487	(247340935)	+	G-rich	Low_complexity	1	44	(0)	2066
212	29.0	2.0	1.8	chr1	2155082	2155347	(246801075)	+	(TGGTGA)n	Simple_repeat	1	266	(0)	2937
28	11.1	1.6	1.6	chr1	2155348	2155409	(246801013)	+	(GGTGATGAC)n	Simple_repeat	1	63	(0)	2938
212	29.0	2.0	1.8	chr1	2155410	2155848	(246800574)	+	(TGGTGA)n	Simple_repeat	6	439	(0)	2939
2507	5.0	0.0	1.7	chr1	2211901	2212201	(246744221)	C	AluY	SINE/Alu	(10)	301	6	3007
283	25.9	1.0	0.3	chr1	3025816	3026506	(245929916)	+	(ATG)n	Simple_repeat	1	698	(0)	3676
173	20.9	3.2	2.3	chr1	5829419	5829880	(243126542)	+	(GATGGT)n	Simple_repeat	1	477	(0)	7338
14	23.8	2.0	1.9	chr1	5993052	5993102	(242963320)	+	(CCCTGCC)n	Simple_repeat	1	52	(0)	7535
485	20.5	2.1	0.8	chr1	6149586	6150660	(242805762)	+	(GATG)n	Simple_repeat	1	1098	(0)	7739
737	17.5	4.8	0.3	chr1	6174363	6175681	(242780741)	+	(GATG)n	Simple_repeat	1	1382	(0)	7776
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
2092	6.2	7.4	0.0	chr1	6205477	6205750	(242750672)	C	AluSz	SINE/Alu	(16)	296	1	7832
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
18	18.6	0.0	7.1	chr1	6613790	6613845	(242342577)	+	(CCG)n	Simple_repeat	1	56	(0)	8544
16	20.6	3.9	1.9	chr1	6625131	6625182	(242331240)	+	(GCCCC)n	Simple_repeat	1	54	(0)	8559
445	23.3	8.1	1.2	chr1	6867052	6867223	(242089199)	C	L1MA10	LINE/L1	(2)	6332	5989	9071
16	21.6	0.0	0.0	chr1	6963256	6963287	(241993135)	+	(C)n	Simple_repeat	1	32	(0)	9195
1207	20.3	0.5	0.5	chr1	7340027	7340244	(241616178)	C	MER58A	DNA/hAT-Charlie	(0)	224	7	9725
25	16.0	2.9	4.2	chr1	7471159	7471227	(241485195)	+	(CTGT)n	Simple_repeat	1	71	(0)	9884
779	21.6	1.6	1.0	chr1	7568066	7569832	(241386590)	+	(TCA)n	Simple_repeat	1	1795	(0)	10010
3199	8.2	4.9	0.7	chr1	8626417	8626881	(240329541)	+	LTR19A	LTR/ERV1	1	486	(0)	11952
2300	9.9	0.3	0.0	chr1	8822285	8822578	(240133844)	+	AluSq2	SINE/Alu	1	295	(18)	12317
2368	7.5	0.0	0.3	chr1	9555111	9555417	(239401005)	C	AluY	SINE/Alu	(0)	311	1	13885
12	13.6	0.0	7.9	chr1	9910656	9910693	(239045729)	+	(GGCGGA)n	Simple_repeat	1	38	(0)	14608
12	13.3	9.3	2.1	chr1	10033001	10033043	(238923379)	+	G-rich	Low_complexity	1	47	(0)	14941
2289	10.5	0.3	0.0	chr1	10377657	10377950	(238578472)	+	AluSg	SINE/Alu	1	295	(15)	15665
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
68	23.8	1.8	6.6	chr1	11272907	11273190	(237683232)	+	(CCGCC)n	Simple_repeat	1	289	(0)	17351
18	9.8	3.0	0.0	chr1	11806284	11806316	(237150106)	+	(CTG)n	Simple_repeat	1	34	(0)	18488
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
37	0.0	0.0	0.0	chr1	11944423	11944454	(237011968)	+	(AC)n	Simple_repeat	1	32	(0)	18805
38	4.9	0.0	0.0	chr1	12510514	12510555	(236445867)	+	(TG)n	Simple_repeat	1	42	(0)	19882
15	0.0	0.0	4.3	chr1	15950925	15950989	(233005433)	+	(GGAT)n	Simple_repeat	1	62	(0)	26386
26	22.7	3.3	6.5	chr1	15951221	15951340	(233005082)	+	GA-rich	Low_complexity	1	124	(0)	26387
13	16.9	0.0	0.0	chr1	16352430	16352456	(232603966)	+	(CGC)n	Simple_repeat	1	27	(0)	27273
17	23.9	3.1	4.5	chr1	16352475	16352538	(232603884)	+	(GC)n	Simple_repeat	1	66	(0)	27274
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
2431	8.4	0.0	0.0	chr1	17054378	17054675	(231901747)	C	AluSx3	SINE/Alu	(13)	298	1	28581
1568	11.1	9.4	6.2	chr1	17054678	17054830	(231901592)	C	AluJo	SINE/Alu	(14)	298	143	28582
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
3528	7.8	1.3	0.0	chr1	19938150	19938613	(229017809)	C	L1PA13	LINE/L1	(4)	6159	5690	34798
1283	26.5	5.4	8.6	chr1	19938614	19938793	(229017629)	C	MLT1J1	LTR/ERVL-MaLR	(284)	228	43	34797
527	21.5	12.3	0.0	chr1	20575031	20575179	(228381243)	C	L2b	LINE/L2	(193)	3182	3013	36089
2313	11.0	0.3	0.0	chr1	21150695	21150995	(227805427)	+	AluSx	SINE/Alu	1	302	(10)	37241
44	2.3	0.0	0.0	chr1	21176568	21176611	(227779811)	+	(CGC)n	Simple_repeat	1	44	(0)	37302
42	0.0	0.0	0.0	chr1	21345885	21345920	(227610502)	+	(TG)n	Simple_repeat	1	36	(0)	37718
20	0.0	0.0	0.0	chr1	21345921	21345942	(227610480)	+	(CG)n	Simple_repeat	1	22	(0)	37719
28	21.0	4.2	4.0	chr1	21346056	21346150	(227610272)	+	(TG)n	Simple_repeat	1	99	(0)	37720
17	21.8	0.0	0.0	chr1	21651413	21651446	(227304976)	+	(CA)n	Simple_repeat	1	34	(0)	38383
18	12.4	13.1	3.2	chr1	21651542	21651569	(227304853)	+	(CACACAG)n	Simple_repeat	1	54	(41)	38384
22	15.1	0.0	0.0	chr1	21651570	21651606	(227304816)	+	(AC)n	Simple_repeat	1	37	(0)	38385
18	12.4	13.1	3.2	chr1	21651607	21651625	(227304797)	+	(CACACAG)n	Simple_repeat	55	95	(0)	38384
18	30.3	5.2	0.0	chr1	21651692	21651768	(227304654)	+	(CG)n	Simple_repeat	1	81	(0)	38386
14	16.9	0.0	2.9	chr1	21651749	21651783	(227304639)	+	(CGCCC)n	Simple_repeat	1	35	(0)	38387
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
2233	9.9	0.0	0.0	chr1	22024622	22024905	(226931517)	C	AluSx1	SINE/Alu	(27)	285	2	39247
1067	19.8	2.8	4.5	chr1	22834464	22834642	(226121780)	C	MER58A	DNA/hAT-Charlie	(2)	222	45	41043
2347	10.6	0.3	0.3	chr1	22834643	22834954	(226121468)	+	AluSz	SINE/Alu	1	312	(0)	41044
29	3.2	0.0	0.0	chr1	22976307	22976338	(225980084)	+	(GTTT)n	Simple_repeat	1	32	(0)	41382
265	19.1	2.1	0.0	chr1	22976384	22976430	(225979992)	+	L2c	LINE/L2	3301	3348	(39)	41383
193	26.4	4.2	3.2	chr1	22976689	22976782	(225979640)	C	MIRb	SINE/MIR	(38)	230	136	41384
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
351	27.7	3.5	0.0	chr1	23178155	23178237	(225778185)	C	MIRb	SINE/MIR	(90)	178	93	41786
537	34.6	5.2	2.2	chr1	23178270	23178491	(225777931)	C	MIRb	SINE/MIR	(26)	242	14	41787
422	29.1	13.3	3.6	chr1	23634339	23634803	(225321619)	C	L2a	LINE/L2	(61)	3365	2845	42947
2270	13.0	0.0	0.0	chr1	24634507	24634813	(224321609)	+	AluSz	SINE/Alu	1	307	(5)	45357
2296	9.6	0.0	0.7	chr1	24634818	24635118	(224321304)	+	AluSz	SINE/Alu	2	300	(12)	45358
625	22.6	6.6	0.6	chr1	25442016	25442171	(223514251)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	47169
208	33.0	13.8	5.4	chr1	25922300	25922411	(223034011)	C	MIR3	SINE/MIR	(45)	163	41	48115
15	19.1	0.0	6.4	chr1	26111803	26111849	(222844573)	+	(CGG)n	Simple_repeat	1	47	(0)	48599
807	13.6	2.3	0.0	chr1	26470317	26470441	(222485981)	C	AluSx	SINE/Alu	(179)	133	6	49427
16	20.9	2.5	0.0	chr1	26696766	26696805	(222259617)	+	(CGG)n	Simple_repeat	1	41	(0)	50005
16	24.1	0.0	2.2	chr1	26697154	26697199	(222259223)	+	(CCT)n	Simple_repeat	1	46	(0)	50006
400	25.9	3.6	0.0	chr1	26865543	26865665	(222090757)	+	MIR3	SINE/MIR	29	159	(49)	50326
2372	6.6	0.0	2.3	chr1	26865696	26865998	(222090424)	+	AluY	SINE/Alu	1	296	(15)	50327
239	29.7	12.8	0.3	chr1	26922336	26922456	(222033966)	+	MIRc	SINE/MIR	13	149	(81)	50463
269	29.3	1.5	8.9	chr1	27045702	27045847	(221910575)	C	LTR37A	LTR/ERV1	(241)	185	51	50787
25	20.7	2.9	1.4	chr1	27046199	27046278	(221910144)	+	(CTCCTC)n	Simple_repeat	1	81	(0)	50788
2144	9.8	0.0	7.9	chr1	27116078	27116395	(221840027)	+	AluSx1	SINE/Alu	1	293	(19)	50963
12	25.2	5.2	1.6	chr1	27154687	27154744	(221801678)	+	(GGCTGTG)n	Simple_repeat	1	61	(0)	51050
18	0.0	0.0	0.0	chr1	27155281	27155300	(221801122)	+	(A)n	Simple_repeat	1	20	(0)	51052
549	27.6	5.0	0.0	chr1	27155433	27155584	(221800838)	+	MIR	SINE/MIR	72	231	(31)	51053
15	13.4	0.0	10.0	chr1	27234576	27234625	(221721797)	+	(CGCAGG)n	Simple_repeat	1	50	(0)	51286
6172	8.8	1.3	1.9	chr1	27247358	27247705	(221708717)	C	L1PREC2	LINE/L1	(35)	6125	5775	51324
2351	10.9	0.3	0.0	chr1	27247706	27248017	(221708405)	C	AluSq2	SINE/Alu	(0)	313	1	51325
52	2.1	0.0	0.0	chr1	27527009	27527057	(221429365)	+	(TG)n	Simple_repeat	1	49	(0)	51966
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
374	33.5	12.3	4.7	chr1	27608251	27608699	(221347723)	+	L2c	LINE/L2	2820	3320	(67)	52111
49	0.0	0.0	0.0	chr1	27608842	27608883	(221347539)	+	(GT)n	Simple_repeat	1	42	(0)	52113
30	0.0	0.0	0.0	chr1	27608903	27608928	(221347494)	+	(GT)n	Simple_repeat	1	26	(0)	52113
16	5.3	0.0	0.0	chr1	27608948	27608967	(221347455)	+	(GT)n	Simple_repeat	1	20	(0)	52113
49	0.0	0.0	0.0	chr1	27608987	27609028	(221347394)	+	(GT)n	Simple_repeat	1	42	(0)	52113
271	32.5	5.0	6.8	chr1	27609199	27609403	(221347019)	+	L2c	LINE/L2	2918	3118	(269)	52114
2389	11.2	0.0	0.0	chr1	27874967	27875278	(221081144)	C	AluSx1	SINE/Alu	(0)	312	1	52731
296	36.0	3.6	4.2	chr1	27875279	27875382	(221081040)	+	MIRb	SINE/MIR	128	232	(36)	52730
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
2434	4.8	2.0	0.0	chr1	27959169	27959458	(220996964)	C	AluSx	SINE/Alu	(16)	296	1	52954
278	19.1	0.0	1.6	chr1	28236203	28236266	(220720156)	C	LTR16D1	LTR/ERVL	(484)	191	129	53615
1790	15.1	0.0	0.3	chr1	28505413	28505711	(220450711)	C	AluSz6	SINE/Alu	(13)	299	2	54373
54	26.6	0.8	0.0	chr1	28552293	28552418	(220404004)	+	(TG)n	Simple_repeat	1	127	(0)	54503
1930	10.6	0.4	0.0	chr1	28552425	28552699	(220403723)	C	AluSc	SINE/Alu	(33)	276	1	54504
12	20.7	5.1	0.0	chr1	28553062	28553100	(220403322)	+	(GCCCC)n	Simple_repeat	1	41	(0)	54505
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
2461	7.4	0.0	1.0	chr1	28747844	28748152	(220208270)	+	AluY	SINE/Alu	1	306	(5)	55040
14	19.3	6.4	0.0	chr1	29237124	29237170	(219719252)	+	(GTGTTGT)n	Simple_repeat	1	50	(0)	56234
192	30.8	4.5	3.6	chr1	30034933	30035043	(218921379)	C	MIRb	SINE/MIR	(71)	197	86	57718
502	28.7	1.7	6.0	chr1	30035153	30035337	(218921085)	C	MIRc	SINE/MIR	(40)	228	52	57719
2290	9.4	0.0	1.0	chr1	30345196	30345493	(218610929)	+	AluSz	SINE/Alu	1	295	(17)	58266
1681	20.1	0.9	2.9	chr1	30345502	30345677	(218610745)	C	MER58B	DNA/hAT-Charlie	(0)	341	170	58267
3242	12.8	3.0	0.0	chr1	30345678	30346169	(218610253)	+	MER84	LTR/ERV1	1	507	(0)	58268
60	1.8	0.0	0.0	chr1	30801414	30801469	(218154953)	+	(AC)n	Simple_repeat	1	56	(0)	59103
1041	27.3	15.3	1.1	chr1	30853998	30854434	(218101988)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	1	59229
356	35.1	9.5	4.7	chr1	30854460	30854539	(218101883)	+	L2b	LINE/L2	3038	3117	(258)	59228
2344	8.8	0.3	0.0	chr1	30854540	30854833	(218101589)	+	AluSz	SINE/Alu	1	295	(17)	59230
40	0.0	0.0	0.0	chr1	31414422	31414455	(217541967)	+	(TG)n	Simple_repeat	1	34	(0)	60631
18	0.0	4.3	0.0	chr1	31414456	31414478	(217541944)	+	(AG)n	Simple_repeat	1	24	(0)	60632
19	14.9	0.0	0.0	chr1	31414601	31414631	(217541791)	+	(GT)n	Simple_repeat	1	31	(0)	60633
496	23.2	22.3	4.1	chr1	31549245	31549608	(217406814)	C	L2a	LINE/L2	(1)	3425	2977	60884
19	9.6	10.6	1.9	chr1	31670356	31670402	(217286020)	+	GA-rich	Low_complexity	1	52	(0)	61125
1623	13.5	6.0	5.1	chr1	31945033	31945127	(217011295)	C	MER2	DNA/TcMar-Tigger	(5)	340	256	61670
2162	9.9	0.0	1.9	chr1	31945128	31945439	(217010983)	+	AluSx1	SINE/Alu	1	306	(6)	61671
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
173	27.5	0.2	0.5	chr1	32471685	32472126	(216484296)	+	(CAT)n	Simple_repeat	1	443	(0)	62918
198	27.9	0.0	0.0	chr1	32472145	32472187	(216484235)	C	L2c	LINE/L2	(11)	3415	3373	62919
2198	8.3	7.7	0.0	chr1	32481645	32481958	(216474464)	C	L1PA14	LINE/L1	(17)	6144	5805	62947
1642	13.0	3.8	8.4	chr1	32481981	32482288	(216474134)	C	AluJb	SINE/Alu	(9)	303	11	62948
2111	17.0	4.3	0.2	chr1	32815508	32815827	(216140595)	+	L1MB7	LINE/L1	5728	6064	(120)	63800
2575	5.3	0.0	0.0	chr1	32815828	32816129	(216140293)	+	AluY	SINE/Alu	1	302	(9)	63801
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
27	13.6	0.0	0.0	chr1	33256904	33256945	(215699477)	+	(GT)n	Simple_repeat	1	42	(0)	64796
46	9.7	0.0	0.0	chr1	33364360	33364425	(215591997)	+	(AC)n	Simple_repeat	1	66	(0)	64973
85	34.2	1.1	1.8	chr1	34928692	34929068	(214027354)	+	(AC)n	Simple_repeat	1	381	(0)	67682
13	14.1	4.7	4.4	chr1	34985166	34985208	(213971214)	+	(CCGCT)n	Simple_repeat	1	45	(0)	67785
12	27.6	0.0	0.0	chr1	35192280	35192318	(213764104)	+	(TGG)n	Simple_repeat	1	39	(0)	68202
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
270	27.2	0.4	0.6	chr1	36126466	36127190	(212829232)	+	(GT)n	Simple_repeat	1	728	(0)	70184
767	22.2	4.8	0.0	chr1	36161431	36161610	(212794812)	+	MIRb	SINE/MIR	44	232	(36)	70257
351	30.0	5.9	1.6	chr1	36223857	36224071	(212732351)	C	MIRc	SINE/MIR	(9)	259	29	70423
351	25.4	8.2	1.0	chr1	36761965	36762102	(212194320)	C	L2a	LINE/L2	(6)	3420	3226	71524
233	25.5	0.3	0.0	chr1	36762103	36762671	(212193751)	+	(CACACA)n	Simple_repeat	1	571	(0)	71525
872	19.4	3.6	8.5	chr1	37440626	37440742	(211515680)	+	L2a	LINE/L2	2820	2934	(485)	72735
189	25.0	15.8	3.0	chr1	37440820	37440951	(211515471)	+	L2a	LINE/L2	3106	3262	(164)	72735
1363	16.5	9.0	4.2	chr1	37440952	37441236	(211515186)	+	AluJo	SINE/Alu	1	300	(12)	72737
399	24.4	3.4	0.3	chr1	37931356	37931482	(211024940)	C	MIR3	SINE/MIR	(89)	141	10	73736
14	16.4	2.9	0.0	chr1	37946923	37946956	(211009466)	+	(CCTGC)n	Simple_repeat	1	35	(0)	73787
732	23.3	10.4	4.9	chr1	38785727	38786230	(210170192)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	1	75330
321	31.2	9.3	5.3	chr1	38786524	38786750	(210169672)	+	L2c	LINE/L2	3022	3258	(129)	75331
1996	7.4	5.6	0.4	chr1	38786754	38787009	(210169413)	+	AluYc	SINE/Alu	1	270	(29)	75332
1846	14.9	0.4	2.1	chr1	39025943	39026230	(209930192)	C	AluJb	SINE/Alu	(29)	283	1	75886
12	19.7	2.3	4.4	chr1	39409058	39409101	(209547321)	+	(AGCC)n	Simple_repeat	1	45	(0)	76680
55	0.0	0.0	0.0	chr1	39701576	39701622	(209254800)	+	(CA)n	Simple_repeat	1	47	(0)	77236
298	16.0	0.0	0.0	chr1	39701653	39701702	(209254720)	+	MLT1O	LTR/ERVL-MaLR	146	195	(347)	77237
587	24.4	5.2	3.9	chr1	39702165	39702421	(209254001)	+	MIRb	SINE/MIR	3	262	(0)	77238
13	32.7	0.0	0.0	chr1	40161427	40161479	(208794943)	+	G-rich	Low_complexity	1	53	(0)	78243
34	0.0	0.0	0.0	chr1	40374597	40374625	(208581797)	+	(GT)n	Simple_repeat	1	29	(0)	78696
16	9.4	10.6	1.9	chr1	40374626	40374672	(208581750)	+	GA-rich	Low_complexity	1	52	(0)	78697
1355	26.0	6.9	11.9	chr1	40530882	40531159	(208425263)	+	L2	LINE/L2	1799	2041	(1378)	78998
300	29.3	4.3	4.8	chr1	40531160	40531324	(208425098)	+	L2-3_Crp	LINE/L2	844	1007	(1089)	79002
35	0.0	0.0	0.0	chr1	41315551	41315580	(207640842)	+	(AC)n	Simple_repeat	1	30	(0)	80560
31	15.9	0.0	1.7	chr1	42177757	42177814	(206778608)	+	(AC)n	Simple_repeat	1	58	(0)	82061
598	28.9	12.8	0.9	chr1	42179879	42180105	(206776317)	C	MIRb	SINE/MIR	(3)	265	8	82063
426	26.4	7.6	0.8	chr1	42180151	42180272	(206776150)	+	Tigger9a	DNA/TcMar-Tigger	1	131	(601)	82064
34	0.0	0.0	0.0	chr1	42181866	42181894	(206774528)	+	(CA)n	Simple_repeat	1	29	(0)	82068
15	4.9	0.0	0.0	chr1	42181895	42181913	(206774509)	+	(CT)n	Simple_repeat	1	19	(0)	82069
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
12	18.0	2.0	7.7	chr1	42456513	42456563	(206499859)	+	(GGCGC)n	Simple_repeat	1	52	(0)	82545
186	33.3	7.0	1.9	chr1	42684187	42684348	(206272074)	C	MamSINE1	SINE/tRNA-RTE	(7)	283	113	82977
197	25.8	4.6	0.0	chr1	42767696	42767757	(206188665)	C	MIRc	SINE/MIR	(76)	192	128	83111
28303	2.5	0.7	0.0	chr1	43114528	43120516	(205835906)	C	L1PA2	LINE/L1	(1)	6154	125	83800
375	36.8	5.4	3.3	chr1	43472110	43472738	(205483684)	C	ERVL-B4-int	LTR/ERVL	(5007)	660	30	84355
798	29.6	3.9	2.5	chr1	43472757	43473033	(205483389)	C	LTR33	LTR/ERVL	(0)	515	235	84359
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	24.9	0.0	0.0	chr1	43946812	43946849	(205009573)	+	(GCCGG)n	Simple_repeat	1	38	(0)	85206
12	27.1	2.3	0.0	chr1	43974948	43974991	(204981431)	+	(GGAC)n	Simple_repeat	1	45	(0)	85234
13	13.5	0.0	7.9	chr1	43975003	43975040	(204981382)	+	(CCG)n	Simple_repeat	1	38	(0)	85235
38	0.0	0.0	0.0	chr1	44037323	44037355	(204919067)	+	(TG)n	Simple_repeat	1	33	(0)	85312
249	24.6	3.2	0.0	chr1	44037472	44037532	(204918890)	C	Chap1_Mam	DNA/hAT-Charlie	(22)	320	258	85313
4907	22.6	7.5	2.9	chr1	44370793	44372016	(204584406)	+	ERV3-16A3_I-int	LTR/ERVL	3186	4470	(756)	85902
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
242	35.2	4.4	0.9	chr1	45011532	45011640	(203944782)	+	L2b	LINE/L2	2654	2766	(653)	87196
13	29.6	4.8	0.0	chr1	46179760	46179822	(202776600)	+	GA-rich	Low_complexity	1	66	(0)	89502
18	22.4	0.0	0.0	chr1	46179929	46179964	(202776458)	+	GA-rich	Low_complexity	1	36	(0)	89503
40	2.6	0.0	0.0	chr1	46179965	46180003	(202776419)	+	(GT)n	Simple_repeat	1	39	(0)	89504
18	22.4	0.0	0.0	chr1	46180004	46180014	(202776408)	+	GA-rich	Low_complexity	37	47	(0)	89505
14	23.3	0.0	7.8	chr1	46180162	46180225	(202776197)	+	(GTGCAT)n	Simple_repeat	1	64	(0)	89506
16	24.5	0.0	0.0	chr1	46718973	46719016	(202237406)	+	(CTCCGG)n	Simple_repeat	1	44	(0)	90530
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
14	13.1	0.0	0.0	chr1	50960185	50960210	(197996212)	+	(CGAG)n	Simple_repeat	1	26	(0)	97705
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
1582	19.2	1.0	4.7	chr1	51111363	51111540	(197844882)	C	AluJb	SINE/Alu	(3)	309	134	97961
2140	10.0	4.1	0.0	chr1	51111541	51111819	(197844603)	C	AluSx	SINE/Alu	(21)	291	1	97962
1582	19.2	1.0	4.7	chr1	51111820	51111957	(197844465)	C	AluJb	SINE/Alu	(179)	133	5	97961
225	33.7	4.2	0.0	chr1	51331624	51331715	(197624707)	+	L3	LINE/CR1	3916	4011	(88)	98455
17	4.3	0.0	0.0	chr1	52056281	52056304	(196900118)	+	(CCG)n	Simple_repeat	1	24	(0)	100081
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
161	24.2	4.5	4.3	chr1	54119771	54120464	(194835958)	+	(CACAAC)n	Simple_repeat	1	725	(0)	104453
15	23.6	10.1	1.8	chr1	54120378	54120476	(194835946)	+	(ATC)n	Simple_repeat	1	109	(0)	104454
307	31.4	0.0	0.0	chr1	54137454	54137539	(194818883)	C	MIRb	SINE/MIR	(81)	187	102	104492
44	2.4	0.0	0.0	chr1	54137664	54137705	(194818717)	+	(TG)n	Simple_repeat	1	42	(0)	104493
317	28.0	3.2	2.5	chr1	54200601	54200755	(194755667)	+	MIRb	SINE/MIR	30	193	(75)	104653
212	34.0	7.8	0.9	chr1	54887691	54887797	(194068625)	C	MIRb	SINE/MIR	(54)	214	100	106109
466	29.0	2.2	3.3	chr1	54950817	54950998	(194005424)	C	MamRep564	Unknown	(70)	287	108	106214
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
14	13.6	0.0	5.6	chr1	58783956	58783991	(190172431)	+	(CTGG)n	Simple_repeat	1	36	(0)	113506
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
35	16.7	0.0	0.0	chr1	61184116	61184176	(187772246)	+	A-rich	Low_complexity	1	61	(0)	117786
49	0.0	0.0	0.0	chr1	61441293	61441334	(187515088)	+	(GT)n	Simple_repeat	1	42	(0)	118149
2052	14.9	6.1	6.5	chr1	61743790	61744045	(187212377)	C	MER65D	LTR/ERV1	(29)	444	186	118749
1396	14.5	12.7	2.6	chr1	61744046	61744314	(187212108)	+	AluJr	SINE/Alu	13	312	(0)	118750
2367	9.9	0.0	0.0	chr1	62122084	62122385	(186834037)	+	AluSx	SINE/Alu	2	303	(9)	119533
1563	22.0	14.3	8.8	chr1	62333322	62333837	(186622585)	+	MLT1G	LTR/ERVL-MaLR	1	541	(54)	120020
2068	11.3	0.0	3.6	chr1	62333838	62334139	(186622283)	+	AluSq2	SINE/Alu	1	291	(22)	120021
283	25.7	18.6	2.2	chr1	63784616	63784794	(185171628)	+	MIRb	SINE/MIR	24	238	(30)	122696
1366	23.7	2.3	5.3	chr1	64262268	64262844	(184693578)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	1	123561
309	29.7	12.9	0.0	chr1	64262845	64262972	(184693450)	+	L2c	LINE/L2	3210	3356	(19)	123560
18	0.0	0.0	0.0	chr1	65067782	65067801	(183888621)	+	(A)n	Simple_repeat	1	20	(0)	125017
20	16.0	0.0	0.0	chr1	65067870	65067904	(183888518)	+	(TG)n	Simple_repeat	1	35	(0)	125018
13	12.2	8.3	0.0	chr1	66930267	66930302	(182026120)	+	(GGCAGC)n	Simple_repeat	1	39	(0)	127982
394	20.8	17.2	0.0	chr1	68331444	68331544	(180624878)	C	MamRep434	DNA/TcMar-Tigger	(1)	425	304	130492
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
644	25.1	1.8	0.0	chr1	74733574	74733736	(174222686)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	139079
250	17.8	0.0	0.0	chr1	80054081	80054125	(168902297)	+	HERVL18-int	LTR/ERVL	5946	5990	(57)	146672
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
6851	9.1	2.8	1.0	chr1	84510183	84511302	(164445120)	+	L1MA3	LINE/L1	5165	6305	(0)	152620
258	24.1	6.3	8.9	chr1	85134495	85134640	(163821782)	+	L2-1_AMi	LINE/L2	391	532	(703)	153671
1272	28.7	4.8	2.2	chr1	85134675	85135180	(163821242)	+	L2	LINE/L2	2538	3057	(362)	153670
20	0.0	0.0	0.0	chr1	85464590	85464611	(163491811)	+	(AC)n	Simple_repeat	1	22	(0)	154198
40	0.0	0.0	0.0	chr1	85580463	85580496	(163375926)	+	(AC)n	Simple_repeat	1	34	(0)	154403
73	1.5	0.0	0.0	chr1	85580533	85580599	(163375823)	+	(AC)n	Simple_repeat	1	67	(0)	154403
579	28.4	4.2	2.9	chr1	87473133	87473332	(161483090)	+	MIRb	SINE/MIR	2	203	(65)	157107
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
2473	16.9	6.2	4.2	chr1	91224743	91225619	(157730803)	+	LTR49-int	LTR/ERV1	662	1656	(4675)	162447
1723	23.4	2.4	3.1	chr1	91225621	91225665	(157730757)	+	LTR49-int	LTR/ERV1	1882	1926	(4405)	162447
2392	11.3	0.0	0.0	chr1	91225666	91225974	(157730448)	+	AluSq2	SINE/Alu	1	309	(4)	162448
31	0.0	0.0	0.0	chr1	91569596	91569622	(157386800)	+	(GT)n	Simple_repeat	1	27	(0)	162919
29	5.5	0.0	0.0	chr1	91569623	91569644	(157386778)	+	(GA)n	Simple_repeat	1	22	(0)	162920
38	22.3	2.6	2.6	chr1	91569778	91569890	(157386532)	+	GA-rich	Low_complexity	1	116	(0)	162921
939	21.4	10.2	10.4	chr1	92859453	92859713	(156096709)	+	LTR82A	LTR/ERVL	2	274	(598)	165248
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
27	0.0	0.0	0.0	chr1	93346087	93346112	(155610310)	+	(GCAGCG)n	Simple_repeat	1	26	(0)	166155
23	15.9	2.0	1.9	chr1	93346157	93346207	(155610215)	+	(GGC)n	Simple_repeat	1	52	(0)	166156
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
2118	10.5	2.2	6.2	chr1	94046161	94046485	(154909937)	+	AluSx	SINE/Alu	1	312	(0)	167205
323	26.0	7.5	5.4	chr1	94143297	94143426	(154812996)	C	MER5A	DNA/hAT-Charlie	(22)	167	35	167350
505	26.1	0.0	3.0	chr1	94143318	94143451	(154812971)	+	MER5A	DNA/hAT-Charlie	59	188	(1)	167351
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
17	18.9	2.9	7.0	chr1	96721667	96721735	(152234687)	+	(CGC)n	Simple_repeat	1	71	(0)	171072
12	12.6	3.7	0.0	chr1	107056667	107056693	(141899729)	+	(CCGCG)n	Simple_repeat	1	28	(0)	184892
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
1892	22.3	3.4	1.0	chr1	109130971	109131419	(139825003)	C	MLT1F	LTR/ERVL-MaLR	(49)	499	40	188055
29	18.2	1.6	0.0	chr1	109484573	109484634	(139471788)	+	(TCCA)n	Simple_repeat	1	63	(0)	188669
16	27.0	0.0	5.8	chr1	110034688	110034756	(138921666)	+	(GCC)n	Simple_repeat	1	69	(0)	189456
632	27.9	14.1	6.4	chr1	111754741	111755081	(137201341)	C	L2a	LINE/L2	(2)	3424	3064	192020
209	27.7	6.7	0.0	chr1	111755063	111755145	(137201277)	C	L2a	LINE/L2	(941)	2478	2390	192020
18	9.4	0.0	5.3	chr1	111755146	111755183	(137201239)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	192021
292	29.2	1.4	0.0	chr1	111755188	111755259	(137201163)	C	L2a	LINE/L2	(1018)	2401	2329	192020
41	0.0	0.0	0.0	chr1	113308626	113308660	(135647762)	+	(GT)n	Simple_repeat	1	35	(0)	194835
25	6.4	0.0	0.0	chr1	113308661	113308693	(135647729)	+	(AG)n	Simple_repeat	1	33	(0)	194836
14	0.0	7.4	3.5	chr1	113758863	113758889	(135197533)	+	(AAAC)n	Simple_repeat	1	29	(0)	195472
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
14	5.0	0.0	0.0	chr1	114757666	114757686	(134198736)	+	(CAC)n	Simple_repeat	1	21	(0)	197230
290	27.6	13.6	2.3	chr1	115469958	115470087	(133486335)	+	L2a	LINE/L2	3280	3426	(0)	198233
229	28.4	18.1	1.0	chr1	116278143	116278238	(132678184)	C	MIRb	SINE/MIR	(128)	140	25	199443
496	27.8	10.8	0.6	chr1	116278253	116278426	(132677996)	+	MER117	DNA/hAT-Charlie	4	197	(0)	199444
977	20.9	3.2	2.8	chr1	116278606	116278821	(132677601)	+	U3	snRNA	1	217	(0)	199445
21	42.9	0.0	1.7	chr1	116466898	116467012	(132489410)	+	(TGG)n	Simple_repeat	1	115	(0)	199743
336	31.7	5.1	1.2	chr1	116474892	116475060	(132481362)	C	MIR3	SINE/MIR	(3)	205	30	199759
50	0.0	0.0	0.0	chr1	116878181	116878223	(132078199)	+	(GT)n	Simple_repeat	1	43	(0)	200423
1110	26.8	9.7	6.0	chr1	118963701	118964164	(129992258)	+	MLT1H2	LTR/ERVL-MaLR	7	489	(0)	203421
356	20.0	1.1	7.2	chr1	118964165	118964252	(129992170)	+	MLT1J2	LTR/ERVL-MaLR	363	444	(4)	203420
2061	11.2	1.4	0.3	chr1	119141041	119141325	(129815097)	C	AluJb	SINE/Alu	(18)	294	7	203667
370	29.1	7.9	2.5	chr1	119141345	119141464	(129814958)	C	L2c	LINE/L2	(1)	3386	3260	203668
379	28.9	1.0	7.0	chr1	119605518	119605676	(129350746)	C	MIRb	SINE/MIR	(61)	169	22	204287
49	0.0	0.0	0.0	chr1	119646323	119646364	(129310058)	+	(AC)n	Simple_repeat	1	42	(0)	204333
1056	26.0	11.4	4.2	chr1	119779704	119780085	(129176337)	+	HAL1M8	LINE/L1	5	417	(2574)	204531
567	21.8	7.6	0.0	chr1	119780118	119780227	(129176195)	C	MER63A	DNA/hAT-Blackjack	(55)	155	37	204532
1271	19.8	10.1	0.9	chr1	119780240	119780555	(129175867)	+	HAL1M8	LINE/L1	426	773	(2218)	204531
70	31.1	0.7	2.5	chr1	119971926	119972201	(128984221)	+	(GAGT)n	Simple_repeat	1	278	(0)	204799
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
408	33.0	7.7	6.7	chr1	144826138	144827246	(104129176)	+	L1MEd	LINE/L1	827	1297	(5874)	210079
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
595	17.9	19.5	14.5	chr1	145281642	145281931	(103674491)	C	AluSz	SINE/Alu	(0)	312	5	210765
691	0.0	0.0	0.0	chr1	145287766	145287841	(103668581)	+	tRNA-Asn-AAC	tRNA	1	76	(1)	210782
2475	10.0	0.0	1.0	chr1	145781895	145782204	(103174218)	C	AluSq	SINE/Alu	(6)	307	1	211513
767	17.9	4.1	0.0	chr1	145782341	145782457	(103173965)	+	FLAM_A	SINE/Alu	1	122	(20)	211514
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
2228	8.4	0.7	0.7	chr1	146035980	146036276	(102920146)	C	AluSq	SINE/Alu	(16)	297	1	211989
666	0.0	0.0	0.0	chr1	146037061	146037132	(102919290)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	211991
2616	5.3	0.0	0.0	chr1	146038384	146038685	(102917737)	C	AluSg	SINE/Alu	(8)	302	1	211995
1391	13.4	6.5	6.5	chr1	146038686	146038852	(102917570)	+	AluJb	SINE/Alu	127	291	(21)	211994
674	0.0	0.0	0.0	chr1	146039401	146039474	(102916948)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	211996
2118	6.1	9.8	0.0	chr1	146039617	146039893	(102916529)	+	AluSp	SINE/Alu	1	307	(6)	211997
17	17.4	0.0	2.9	chr1	147540964	147540998	(101415424)	+	(CT)n	Simple_repeat	1	35	(0)	214257
115	0.0	2.8	0.0	chr1	147541071	147541178	(101415244)	+	(GA)n	Simple_repeat	1	111	(0)	214258
41	6.0	0.0	0.0	chr1	147541179	147541230	(101415192)	+	(TG)n	Simple_repeat	1	52	(0)	214259
267	27.6	1.3	0.0	chr1	148263083	148263158	(100693264)	+	Charlie4a	DNA/hAT-Charlie	381	457	(51)	215388
654	1.4	0.0	0.0	chr1	148265108	148265179	(100691243)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	215393
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
15	17.4	2.9	0.0	chr1	150321483	150321516	(98634906)	+	(GCG)n	Simple_repeat	1	35	(0)	218779
28	0.0	0.0	0.0	chr1	150364656	150364681	(98591741)	+	(CCG)n	Simple_repeat	1	26	(0)	218877
12	9.2	0.0	4.0	chr1	150364717	150364741	(98591681)	+	(GGC)n	Simple_repeat	1	25	(0)	218878
2451	6.4	0.3	0.0	chr1	150876981	150877276	(98079146)	+	AluSq	SINE/Alu	1	297	(16)	220010
2569	5.7	0.0	0.0	chr1	151254130	151254428	(97701994)	C	AluSx3	SINE/Alu	(12)	299	1	220825
13	18.3	2.6	2.5	chr1	151254877	151254915	(97701507)	+	G-rich	Low_complexity	1	40	(0)	220826
12	15.3	3.5	0.0	chr1	151346696	151346724	(97609698)	+	(CAA)n	Simple_repeat	1	30	(0)	221009
2118	14.7	0.0	0.6	chr1	151594685	151594998	(97361424)	+	AluJb	SINE/Alu	1	312	(0)	221557
22	11.3	0.0	0.0	chr1	151594999	151595036	(97361386)	+	(CAAAAAA)n	Simple_repeat	1	38	(0)	221558
1674	21.4	8.8	10.8	chr1	151606173	151606707	(97349715)	C	MLT1E1A	LTR/ERVL-MaLR	(12)	668	32	221584
301	35.5	4.2	2.5	chr1	151606738	151606899	(97349523)	C	L2c	LINE/L2	(197)	3190	3026	221585
2217	13.9	5.4	1.4	chr1	151611129	151611499	(97344923)	C	Tigger3b	DNA/TcMar-Tigger	(844)	387	1	221593
295	26.1	13.3	1.8	chr1	151611537	151611649	(97344773)	+	MIRc	SINE/MIR	60	187	(81)	221595
20	25.3	4.3	0.0	chr1	151612252	151612321	(97344101)	+	(CGG)n	Simple_repeat	1	73	(0)	221596
13	29.7	3.1	1.5	chr1	151717312	151717375	(97239047)	+	GA-rich	Low_complexity	1	66	(0)	221784
89	4.4	0.0	0.0	chr1	151836722	151836815	(97119607)	+	(GT)n	Simple_repeat	1	94	(0)	221957
13	11.6	3.6	0.0	chr1	151836960	151836987	(97119435)	+	(CCTC)n	Simple_repeat	1	29	(0)	221958
22	3.8	0.0	0.0	chr1	151941277	151941303	(97015119)	+	(CT)n	Simple_repeat	1	27	(0)	222159
23	7.2	0.0	0.0	chr1	151941303	151941332	(97015090)	+	(CA)n	Simple_repeat	1	30	(0)	222160
47	4.3	0.0	0.0	chr1	151941390	151941438	(97014984)	+	(AC)n	Simple_repeat	1	49	(0)	222161
40	8.3	0.0	0.0	chr1	153945554	153945605	(95010817)	+	(AC)n	Simple_repeat	1	52	(0)	225115
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
589	32.2	13.8	5.4	chr1	154353219	154354243	(94602179)	+	L2	LINE/L2	1431	2555	(864)	225966
292	15.6	0.0	0.0	chr1	154481227	154481271	(94475151)	+	Eulor9C	DNA	188	232	(38)	226274
37	0.0	0.0	0.0	chr1	154558615	154558648	(94397774)	+	(CCG)n	Simple_repeat	1	34	(0)	226414
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
443	26.6	4.0	9.7	chr1	154559240	154559476	(94396946)	+	MIRc	SINE/MIR	20	242	(26)	226416
645	32.5	3.9	8.8	chr1	155025175	155025301	(93931121)	+	L2c	LINE/L2	3263	3386	(1)	227204
2445	9.4	0.0	0.0	chr1	155025318	155025626	(93930796)	C	AluSc	SINE/Alu	(0)	309	1	227215
12	21.8	2.7	0.0	chr1	155209171	155209207	(93747215)	+	G-rich	Low_complexity	1	38	(0)	227542
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
12	12.6	0.0	3.6	chr1	155250854	155250881	(93705541)	+	(GCCTG)n	Simple_repeat	1	28	(0)	227620
12	18.3	0.0	3.0	chr1	155255459	155255491	(93700931)	+	G-rich	Low_complexity	1	33	(0)	227628
216	21.0	22.1	0.0	chr1	155309378	155309499	(93646923)	+	MIRc	SINE/MIR	43	201	(7)	227718
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
14	16.7	0.0	5.3	chr1	155688320	155688357	(93268065)	+	(GGC)n	Simple_repeat	1	38	(0)	228557
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
2296	8.2	1.0	0.0	chr1	155857448	155857739	(93098683)	+	AluSx	SINE/Alu	1	295	(17)	228965
568	27.9	11.2	5.0	chr1	155873836	155874016	(93082406)	C	Tigger19a	DNA/TcMar-Tigger	(86)	237	53	228997
1605	18.6	8.7	0.0	chr1	155874019	155874303	(93082119)	+	AluSz6	SINE/Alu	1	312	(0)	228999
1891	15.6	1.7	0.0	chr1	155874318	155874605	(93081817)	+	AluJb	SINE/Alu	1	293	(19)	229000
2193	11.1	0.0	0.9	chr1	156033561	156033876	(92922546)	+	AluSq2	SINE/Alu	1	313	(0)	229342
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
2441	3.7	0.3	0.0	chr1	156338983	156339278	(92617144)	+	AluSx	SINE/Alu	2	298	(14)	229969
2494	6.0	0.0	0.0	chr1	156505620	156505917	(92450505)	+	AluSx4	SINE/Alu	2	299	(11)	230245
23	21.7	2.5	3.7	chr1	160262403	160262482	(88693940)	+	(CCACCG)n	Simple_repeat	1	82	(0)	235489
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
2256	10.6	0.3	0.7	chr1	161115061	161115363	(87841059)	C	AluSx1	SINE/Alu	(10)	302	1	236908
2709	13.8	15.0	2.6	chr1	161115364	161115875	(87840547)	+	MER44D	DNA/TcMar-Tigger	109	703	(2)	236907
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
20	0.0	0.0	0.0	chr1	161225920	161225941	(87730481)	+	(T)n	Simple_repeat	1	22	(0)	237108
681	0.0	0.0	0.0	chr1	161428077	161428150	(87528272)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	237526
633	1.4	0.0	0.0	chr1	161523846	161523917	(87432505)	C	tRNA-Gly-GGY	tRNA	(2)	72	1	237663
350	29.6	8.5	0.9	chr1	162056296	162056404	(86900018)	+	MIR3	SINE/MIR	17	134	(134)	238530
232	32.3	13.7	1.1	chr1	162239845	162240035	(86716387)	C	MIRc	SINE/MIR	(32)	236	18	238805
47	0.0	0.0	0.0	chr1	162240245	162240284	(86716138)	+	(GT)n	Simple_repeat	1	40	(0)	238806
416	29.9	10.4	2.6	chr1	162328511	162328740	(86627682)	C	MIR	SINE/MIR	(11)	251	2	238959
228	38.8	1.0	0.0	chr1	162328751	162328848	(86627574)	+	L3	LINE/CR1	3872	3970	(129)	238956
17	11.2	0.0	0.0	chr1	162328922	162328950	(86627472)	+	(TTG)n	Simple_repeat	1	29	(0)	238960
230	28.9	6.5	3.0	chr1	162630899	162631077	(86325345)	C	CR1-3_Croc	LINE/CR1	(841)	2764	2590	239511
51	0.0	0.0	0.0	chr1	162631183	162631226	(86325196)	+	(TG)n	Simple_repeat	1	44	(0)	239512
26	6.3	0.0	0.0	chr1	162673576	162673609	(86282813)	+	(TG)n	Simple_repeat	1	34	(0)	239593
40	6.1	0.0	0.0	chr1	162673609	162673659	(86282763)	+	(GA)n	Simple_repeat	1	51	(0)	239594
30	0.0	0.0	0.0	chr1	162673733	162673761	(86282661)	+	(AAAAC)n	Simple_repeat	1	29	(0)	239595
908	31.2	8.8	1.0	chr1	162673907	162674304	(86282118)	+	L2b	LINE/L2	2244	2675	(744)	239596
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
658	0.0	0.0	0.0	chr1	167715488	167715559	(81240863)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	247182
13	5.3	0.0	0.0	chr1	169367760	169367779	(79588643)	+	(CAC)n	Simple_repeat	1	20	(0)	249846
847	24.2	6.6	0.0	chr1	171644750	171644947	(77311475)	C	MIRb	SINE/MIR	(9)	259	48	253079
1432	23.5	18.1	5.9	chr1	171644992	171645650	(77310772)	+	LTR41B	LTR/ERVL	1	757	(1)	253080
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
53	0.0	0.0	0.0	chr1	175029654	175029698	(73926724)	+	(CA)n	Simple_repeat	1	45	(0)	258117
67	0.0	5.6	0.0	chr1	175030000	175030070	(73926352)	+	(AC)n	Simple_repeat	1	75	(0)	258118
26	0.0	0.0	0.0	chr1	175192818	175192842	(73763580)	+	(CCCGC)n	Simple_repeat	1	25	(0)	258355
14	26.3	1.9	1.9	chr1	175193088	175193140	(73763282)	+	(CGCCCCC)n	Simple_repeat	1	54	(0)	258356
12	5.5	0.0	0.0	chr1	177984230	177984248	(70972174)	+	(TGC)n	Simple_repeat	1	19	(0)	262388
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
1143	23.1	7.6	11.9	chr1	182186662	182187049	(66769373)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	268977
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
383	30.7	9.7	5.8	chr1	182616033	182616340	(66340082)	C	MLT1N2	LTR/ERVL-MaLR	(31)	531	211	269756
388	34.4	9.6	0.0	chr1	182782269	182782419	(66174003)	+	LTR88a	LTR/Gypsy?	227	393	(423)	270050
30	0.0	0.0	0.0	chr1	182786113	182786138	(66170284)	+	(AC)n	Simple_repeat	1	26	(0)	270055
1694	15.5	7.1	7.5	chr1	182786139	182786200	(66170222)	+	L1MB7	LINE/L1	5911	5965	(219)	270053
2013	10.8	8.0	0.0	chr1	182786201	182786487	(66169935)	+	AluSp	SINE/Alu	1	312	(1)	270056
1694	15.5	7.1	7.5	chr1	182786488	182786705	(66169717)	+	L1MB7	LINE/L1	5966	6182	(2)	270053
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
256	28.7	14.0	0.8	chr1	182840103	182840232	(66116190)	C	L2	LINE/L2	(639)	2780	2631	270134
440	27.8	8.0	8.7	chr1	182840240	182840299	(66116123)	+	MIRb	SINE/MIR	11	62	(206)	270135
2467	6.4	0.7	0.0	chr1	182840300	182840597	(66115825)	C	AluSc	SINE/Alu	(9)	300	1	270136
520	30.4	5.0	12.5	chr1	183060449	183060752	(65895670)	+	L2c	LINE/L2	3108	3387	(0)	270508
180	32.2	4.8	13.5	chr1	183060897	183061104	(65895318)	C	L2	LINE/L2	(553)	2866	2678	270509
2362	8.2	0.0	2.6	chr1	183206363	183206668	(65749754)	+	AluSx	SINE/Alu	2	299	(13)	270725
197	28.7	17.3	0.0	chr1	183206822	183206936	(65749486)	+	MIRb	SINE/MIR	4	142	(126)	270726
13	15.1	5.1	2.4	chr1	183471444	183471500	(65484922)	+	(CGCC)n	Simple_repeat	1	58	(0)	271187
12	5.5	0.0	0.0	chr1	183472602	183472620	(65483802)	+	(GCG)n	Simple_repeat	1	19	(0)	271190
41	4.1	1.9	1.9	chr1	184386769	184386820	(64569602)	+	(AC)n	Simple_repeat	1	53	(0)	272566
927	24.7	17.2	1.3	chr1	184419456	184420037	(64536385)	C	L2a	LINE/L2	(0)	3426	2738	272624
56	30.0	0.0	0.0	chr1	185156495	185156656	(63799766)	+	G-rich	Low_complexity	1	162	(0)	273834
13	13.7	0.0	0.0	chr1	193060087	193060111	(55896311)	+	(CTC)n	Simple_repeat	1	25	(0)	284288
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
33	26.5	0.0	0.0	chr1	200409595	200409678	(48546744)	+	(GCC)n	Simple_repeat	1	84	(0)	294191
14	12.9	2.6	5.1	chr1	200409732	200409769	(48546653)	+	GA-rich	Low_complexity	1	39	(0)	294192
17	11.1	0.0	0.0	chr1	200409951	200409979	(48546443)	+	(CCG)n	Simple_repeat	1	29	(0)	294193
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
42	0.0	0.0	0.0	chr1	201435916	201435951	(47520471)	+	(TG)n	Simple_repeat	1	36	(0)	296005
20	16.3	0.0	0.0	chr1	201435953	201435987	(47520435)	+	GA-rich	Low_complexity	1	35	(0)	296006
1717	17.4	5.4	1.1	chr1	201460830	201461110	(47495312)	+	AluJb	SINE/Alu	1	294	(18)	296063
682	25.7	2.2	8.1	chr1	201461111	201461162	(47495260)	+	MIR	SINE/MIR	201	246	(16)	296062
268	29.6	10.8	7.8	chr1	201461175	201461416	(47495006)	C	L2c	LINE/L2	(20)	3367	3118	296064
13	16.5	0.0	0.0	chr1	201829212	201829238	(47127184)	+	(GGC)n	Simple_repeat	1	27	(0)	296704
12	24.3	0.0	0.0	chr1	202283788	202283821	(46672601)	+	(CACAG)n	Simple_repeat	1	34	(0)	297618
455	23.9	0.9	0.9	chr1	202283861	202283974	(46672448)	+	MIR	SINE/MIR	31	144	(118)	297619
12	28.1	1.9	1.9	chr1	202808521	202808573	(46147849)	+	(CCCGC)n	Simple_repeat	1	54	(0)	298520
1679	12.8	5.3	2.7	chr1	202927401	202927696	(46028726)	+	AluJb	SINE/Alu	1	304	(8)	298768
721	28.9	5.2	1.7	chr1	203271098	203271336	(45685086)	C	MLT1J	LTR/ERVL-MaLR	(264)	248	1	299324
205	32.3	17.4	0.8	chr1	203271337	203271470	(45684952)	+	MIRb	SINE/MIR	84	244	(24)	299325
46	12.3	0.0	0.0	chr1	203306796	203306875	(45649547)	+	(AC)n	Simple_repeat	1	80	(0)	299386
165	21.4	2.7	3.1	chr1	203526932	203527567	(45428855)	+	(CA)n	Simple_repeat	1	633	(0)	299758
18	11.9	10.1	4.0	chr1	204073626	204073694	(44882728)	+	(GCCGCGA)n	Simple_repeat	1	76	(0)	300930
21	13.9	0.0	0.0	chr1	204073662	204073701	(44882721)	+	(GAGCCCC)n	Simple_repeat	1	40	(0)	300932
38	2.8	0.0	0.0	chr1	204073964	204074000	(44882422)	+	(TG)n	Simple_repeat	1	37	(0)	300933
16	0.0	0.0	0.0	chr1	204074002	204074019	(44882403)	+	(CG)n	Simple_repeat	1	18	(0)	300934
2624	4.6	0.0	0.0	chr1	205265960	205266261	(43690161)	+	AluYm1	SINE/Alu	1	302	(9)	303095
2224	11.3	1.3	0.7	chr1	205266309	205266618	(43689804)	+	AluSx	SINE/Alu	1	312	(0)	303096
1011	15.7	6.4	2.5	chr1	205972783	205975447	(42980975)	+	(CA)n	Simple_repeat	1	2768	(0)	304363
456	15.3	6.0	1.5	chr1	206003837	206004902	(42951520)	+	(AC)n	Simple_repeat	1	1130	(0)	304414
1013	30.0	2.7	2.7	chr1	206887324	206887734	(42068688)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	305867
70	0.0	0.0	0.0	chr1	208022028	208022087	(40934335)	+	(GT)n	Simple_repeat	1	60	(0)	307493
548	34.5	9.2	0.4	chr1	209601755	209601993	(39354429)	C	MIRb	SINE/MIR	(0)	268	7	309914
1211	18.2	0.5	1.8	chr1	209602133	209602350	(39354072)	C	MER20	DNA/hAT-Charlie	(2)	217	3	309915
46	2.3	0.0	0.0	chr1	209674668	209674711	(39281711)	+	(TC)n	Simple_repeat	1	44	(0)	310026
25	0.0	0.0	0.0	chr1	209674712	209674739	(39281683)	+	(AC)n	Simple_repeat	1	28	(0)	310027
17	20.3	2.4	0.0	chr1	209675275	209675315	(39281107)	+	(TCC)n	Simple_repeat	1	42	(0)	310028
328	24.3	0.0	0.0	chr1	209885180	209885249	(39071173)	C	MIR	SINE/MIR	(2)	260	191	310331
21	4.0	0.0	0.0	chr1	209937533	209937558	(39018864)	+	(GT)n	Simple_repeat	1	26	(0)	310408
35	0.0	0.0	0.0	chr1	209937559	209937588	(39018834)	+	(GA)n	Simple_repeat	1	30	(0)	310409
21	8.8	0.0	2.6	chr1	209937687	209937724	(39018698)	+	(CAAAA)n	Simple_repeat	1	38	(0)	310410
1028	27.4	8.0	4.9	chr1	210339368	210339854	(38616568)	+	MLT1H	LTR/ERVL-MaLR	47	549	(0)	311004
326	26.9	2.4	3.3	chr1	210523794	210523939	(38432483)	C	L2a	LINE/L2	(34)	3392	3229	311296
1528	17.9	6.0	1.6	chr1	210523940	210524256	(38432166)	+	L1MB1	LINE/L1	5836	6167	(1)	311297
382	30.9	14.1	5.2	chr1	211037075	211037306	(37919116)	C	MIRc	SINE/MIR	(8)	260	5	312019
363	29.9	14.0	0.5	chr1	211037300	211037497	(37918925)	C	MIRc	SINE/MIR	(18)	250	22	312020
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
15	18.4	2.1	4.2	chr1	211259610	211259656	(37696766)	+	(CGGCAG)n	Simple_repeat	1	48	(0)	312390
14	4.8	0.0	4.2	chr1	211259634	211259657	(37696765)	+	(CGG)n	Simple_repeat	1	24	(0)	312391
546	34.1	5.1	6.6	chr1	211929276	211929670	(37026752)	C	L2b	LINE/L2	(15)	3360	2972	313650
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
158	24.7	0.7	1.4	chr1	212689682	212690091	(36266331)	+	(CA)n	Simple_repeat	1	413	(0)	314973
788	31.6	16.6	1.7	chr1	214569125	214569745	(34386677)	+	L2c	LINE/L2	2445	3155	(232)	317912
11	20.1	2.9	0.0	chr1	220690463	220690496	(28265926)	+	G-rich	Low_complexity	1	35	(0)	326595
23	19.5	7.3	5.3	chr1	220748562	220748684	(28207738)	+	(CGCCTGG)n	Simple_repeat	1	132	(0)	326676
194	33.3	12.4	2.0	chr1	221263629	221263729	(27692693)	+	MamTip2	DNA/hAT-Tip100	193	305	(0)	327400
367	27.9	1.8	4.6	chr1	222464743	222464915	(26491507)	C	L1ME4c	LINE/L1	(101)	729	562	329166
573	5.3	0.0	0.0	chr1	222465005	222465079	(26491343)	+	tRNA-Thr-ACA	tRNA	1	75	(1)	329167
14	15.5	2.6	2.6	chr1	222712506	222712543	(26243879)	+	(CCGCC)n	Simple_repeat	1	39	(0)	329541
2999	8.8	1.6	2.4	chr1	222850441	222850894	(26105528)	C	L1PA14	LINE/L1	(5)	6156	5707	329798
486	25.0	1.7	0.8	chr1	223134016	223134132	(25822290)	+	MIRb	SINE/MIR	55	172	(96)	330257
3171	16.8	1.5	4.5	chr1	223198248	223198885	(25757537)	+	L1MB3	LINE/L1	5565	6182	(1)	330375
18	0.0	0.0	0.0	chr1	223363361	223363382	(25593040)	+	(TGC)n	Simple_repeat	1	22	(0)	330583
10675	13.8	2.0	0.4	chr1	223673692	223675295	(25281127)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	330997
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
260	24.4	1.2	13.7	chr1	224184055	224184149	(24772273)	C	MIRc	SINE/MIR	(62)	206	124	331976
347	27.3	14.5	2.5	chr1	224268244	224268442	(24687980)	C	MIRb	SINE/MIR	(15)	253	27	332191
2131	12.5	0.3	5.1	chr1	224290375	224290519	(24665903)	+	AluSx1	SINE/Alu	1	145	(167)	332242
2700	6.3	0.0	0.3	chr1	224290520	224290820	(24665602)	+	AluY	SINE/Alu	1	300	(11)	332243
805	12.5	0.8	2.5	chr1	224356517	224356636	(24599786)	+	FRAM	SINE/Alu	38	155	(21)	332413
2232	10.2	2.0	0.0	chr1	224377487	224377779	(24578643)	C	AluSz	SINE/Alu	(13)	299	1	332452
36	25.6	4.1	2.6	chr1	224434585	224434730	(24521692)	+	(CGG)n	Simple_repeat	1	152	(0)	332551
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
14	35.6	0.0	0.0	chr1	224506251	224506287	(24450135)	+	(ACACAC)n	Simple_repeat	1	54	(0)	332686
18	12.1	0.0	0.0	chr1	224506261	224506288	(24450134)	+	(GC)n	Simple_repeat	1	28	(0)	332687
15	0.0	0.0	0.0	chr1	224506288	224506304	(24450118)	+	(CA)n	Simple_repeat	1	17	(0)	332688
1792	19.6	0.0	1.0	chr1	224554575	224554886	(24401536)	C	AluJb	SINE/Alu	(3)	309	1	332774
1753	14.3	2.6	14.9	chr1	224554887	224555104	(24401318)	+	MER2	DNA/TcMar-Tigger	144	345	(0)	332773
786	21.8	7.2	2.2	chr1	224555105	224555268	(24401154)	C	MIR	SINE/MIR	(66)	196	23	332772
1172	13.9	0.6	1.7	chr1	224593141	224593320	(24363102)	C	AluJb	SINE/Alu	(0)	312	135	332837
274	26.9	3.1	4.1	chr1	224593434	224593530	(24362892)	C	MIRc	SINE/MIR	(143)	125	30	332838
13	26.3	0.0	2.1	chr1	224708183	224708229	(24248193)	+	(CCTCT)n	Simple_repeat	1	47	(0)	333020
12	21.7	0.0	0.0	chr1	224894937	224894968	(24061454)	+	(ACAATT)n	Simple_repeat	1	32	(0)	333325
794	18.5	0.0	9.2	chr1	224895212	224895320	(24061102)	+	MER5B	DNA/hAT-Charlie	1	109	(69)	333326
1339	28.4	13.3	5.0	chr1	224922174	224922859	(24033563)	C	LTR41B	LTR/ERVL	(6)	752	1	333369
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
21621	13.4	4.1	1.3	chr1	225108473	225115060	(23841362)	C	L1M1	LINE/L1	(767)	6798	10	333579
1185	19.3	3.4	3.7	chr1	225355711	225356192	(23600230)	C	L1MB4	LINE/L1	(2)	6178	5663	333840
614	25.1	13.7	3.4	chr1	225356205	225356439	(23599983)	+	Charlie8	DNA/hAT-Charlie	70	332	(2096)	333841
15	7.5	0.0	6.2	chr1	225427627	225427658	(23528764)	+	(GCCGC)n	Simple_repeat	1	32	(0)	333956
14	18.3	2.5	2.4	chr1	225427783	225427822	(23528600)	+	GA-rich	Low_complexity	1	41	(0)	333957
255	30.2	10.5	0.0	chr1	225474923	225475041	(23481381)	+	MIR	SINE/MIR	27	159	(103)	334028
2093	15.3	1.0	0.0	chr1	225735220	225735527	(23220895)	+	AluSz6	SINE/Alu	1	311	(1)	334484
200	30.8	10.1	3.6	chr1	225777463	225777600	(23178822)	+	L2c	LINE/L2	3231	3378	(9)	334567
2618	7.2	10.5	1.2	chr1	225810575	225810980	(23145442)	C	LTR7	LTR/ERV1	(2)	448	1	334625
11	7.4	10.3	0.0	chr1	225928519	225928547	(23027875)	+	(CTGCTT)n	Simple_repeat	1	32	(0)	334828
2124	13.5	0.0	1.0	chr1	225934534	225934837	(23021585)	C	AluSx1	SINE/Alu	(11)	301	1	334844
7187	12.7	4.3	3.0	chr1	225934838	225935053	(23021369)	C	Tigger3b	DNA/TcMar-Tigger	(1016)	215	2	334840
349	35.8	8.5	1.9	chr1	226002404	226002665	(22953757)	+	MamRTE1	LINE/RTE-BovB	3478	3758	(54)	334985
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
433	26.1	10.9	5.3	chr1	226310490	226310679	(22645743)	+	MIR	SINE/MIR	28	229	(33)	335646
12	11.6	3.3	3.2	chr1	226310871	226310900	(22645522)	+	GA-rich	Low_complexity	1	31	(0)	335647
2357	10.0	0.0	0.0	chr1	226311644	226311943	(22644479)	C	AluSq2	SINE/Alu	(13)	300	1	335650
2304	13.4	3.4	4.4	chr1	226311944	226312288	(22644134)	C	MLT1A1	LTR/ERVL-MaLR	(58)	350	1	335649
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
2180	11.8	0.0	0.7	chr1	226753175	226753471	(22202951)	+	AluSx1	SINE/Alu	3	297	(15)	336396
1081	27.6	9.0	4.3	chr1	226753502	226754270	(22202152)	C	L2a	LINE/L2	(4)	3422	2596	336397
1035	19.5	0.6	0.0	chr1	226763279	226763442	(22192980)	C	AluJo	SINE/Alu	(11)	301	137	336424
1303	19.1	4.5	4.2	chr1	226763446	226763733	(22192689)	C	AluSx	SINE/Alu	(14)	298	10	336425
330	29.3	11.8	0.9	chr1	226778650	226778829	(22177593)	+	MIRc	SINE/MIR	54	247	(21)	336458
18	5.7	0.0	10.9	chr1	226944088	226944133	(22012289)	+	G-rich	Low_complexity	1	46	(0)	336733
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
53	0.0	0.0	0.0	chr1	227432088	227432132	(21524290)	+	(AC)n	Simple_repeat	1	45	(0)	337504
2222	11.7	0.0	0.0	chr1	227481262	227481569	(21474853)	+	AluSc5	SINE/Alu	2	309	(0)	337580
53	0.0	0.0	0.0	chr1	227953874	227953918	(21002504)	+	(GT)n	Simple_repeat	1	45	(0)	338094
49	3.0	4.1	2.6	chr1	227953919	227953991	(21002431)	+	(AGAGAC)n	Simple_repeat	1	76	(0)	338095
26	0.0	0.0	0.0	chr1	228015013	228015037	(20941385)	+	(AAAAC)n	Simple_repeat	1	25	(0)	338178
275	15.5	9.3	0.1	chr1	228042403	228043119	(20913303)	+	(GATG)n	Simple_repeat	1	784	(0)	338223
22	22.6	2.4	4.7	chr1	228082878	228082977	(20873445)	+	G-rich	Low_complexity	1	97	(0)	338274
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
645	15.3	17.5	0.0	chr1	228103818	228103954	(20852468)	+	FRAM	SINE/Alu	1	166	(10)	338295
14	18.4	0.0	0.0	chr1	228109057	228109087	(20847335)	+	(CCCT)n	Simple_repeat	1	31	(0)	338301
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
1394	20.8	10.3	8.5	chr1	228491021	228491105	(20465317)	C	MER34	LTR/ERV1	(0)	542	458	338802
1923	14.3	1.0	1.0	chr1	228491106	228491413	(20465009)	+	AluJr	SINE/Alu	1	308	(4)	338803
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
21	11.2	0.0	0.0	chr1	229559386	229559415	(19397007)	+	(T)n	Simple_repeat	1	30	(0)	340497
1886	8.9	0.4	0.0	chr1	229559420	229559656	(19396766)	C	AluSx	SINE/Alu	(74)	238	1	340498
1182	28.9	5.7	6.6	chr1	229843140	229843879	(19112543)	C	L1MEd	LINE/L1	(3994)	2248	1535	341001
321	29.8	13.2	4.3	chr1	229843936	229844142	(19112280)	+	MLT1J1	LTR/ERVL-MaLR	76	303	(141)	341005
376	8.2	0.0	0.0	chr1	230269140	230269188	(18687234)	C	AluYg6	SINE/Alu	(10)	301	253	341623
2315	9.8	0.0	0.0	chr1	230269189	230269485	(18686937)	C	AluSz	SINE/Alu	(15)	297	1	341624
13	13.2	6.1	0.0	chr1	231162937	231162969	(17793453)	+	(CAGCG)n	Simple_repeat	1	35	(0)	343023
17	15.9	0.0	2.7	chr1	231337395	231337442	(17618980)	+	(GGC)n	Simple_repeat	1	46	(0)	343323
24	18.8	1.6	3.1	chr1	231421889	231421952	(17534470)	+	(GGC)n	Simple_repeat	1	65	(0)	343471
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
183	25.9	1.8	1.8	chr1	231773023	231773077	(17183345)	C	MIRb	SINE/MIR	(101)	167	113	344050
2367	10.4	0.0	0.0	chr1	231773375	231773683	(17182739)	C	AluSc8	SINE/Alu	(2)	309	1	344051
2145	12.9	0.6	0.3	chr1	231898650	231898960	(17057462)	+	AluSz6	SINE/Alu	1	312	(0)	344223
21	20.3	4.7	0.0	chr1	231898961	231899018	(17057404)	+	(AACAA)n	Simple_repeat	1	61	(0)	344224
1379	25.8	7.4	5.0	chr1	232033033	232033517	(16922905)	+	L2a	LINE/L2	2372	2869	(550)	344406
303	28.1	7.5	4.9	chr1	232033559	232033700	(16922722)	+	L2a	LINE/L2	3280	3425	(1)	344406
373	27.4	9.4	6.4	chr1	232223715	232224158	(16732264)	+	L2a	LINE/L2	2702	3181	(245)	344679
2433	17.1	5.4	0.2	chr1	232224159	232224579	(16731843)	+	LTR32	LTR/ERVL	1	444	(13)	344680
239	26.8	1.0	2.0	chr1	232670638	232670736	(16285686)	+	L2b	LINE/L2	2113	2210	(1209)	345233
1615	17.0	19.5	0.5	chr1	232949718	232950119	(16006303)	+	LTR54B	LTR/ERV1	1	497	(1)	345698
422	24.9	2.3	9.1	chr1	232950120	232950204	(16006218)	+	MER5B	DNA/hAT-Charlie	89	172	(6)	345697
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
206	30.7	11.4	0.7	chr1	233355960	233356100	(15600322)	+	L2a	LINE/L2	2926	3083	(304)	346263
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
2050	14.3	0.3	3.5	chr1	234402572	234402885	(14553537)	C	AluJb	SINE/Alu	(8)	304	1	347814
316	36.5	6.9	5.7	chr1	234403288	234403618	(14552804)	+	L2a	LINE/L2	3054	3388	(38)	347812
668	29.3	13.3	9.9	chr1	234474782	234476017	(14480405)	+	L1MCc	LINE/L1	13	1297	(5126)	347925
38	0.0	0.0	0.0	chr1	234491193	234491225	(14465197)	+	(AC)n	Simple_repeat	1	33	(0)	347951
23	12.6	0.0	0.0	chr1	234491226	234491260	(14465162)	+	(GA)n	Simple_repeat	1	35	(0)	347952
204	29.2	6.8	0.0	chr1	234501072	234501172	(14455250)	C	MIR1_Amn	SINE/MIR	(60)	148	43	347976
2213	9.8	2.6	0.0	chr1	234501325	234501619	(14454803)	+	AluSc	SINE/Alu	1	303	(6)	347977
466	27.7	8.6	3.0	chr1	234503100	234503330	(14453092)	+	ORSL-2a	DNA/hAT-Tip100	97	341	(1)	347980
198	21.6	0.0	0.0	chr1	234508420	234508456	(14447966)	+	MIRb	SINE/MIR	14	50	(218)	347995
243	23.1	1.9	0.0	chr1	234508469	234508520	(14447902)	C	MIRb	SINE/MIR	(202)	66	14	347996
200	22.9	2.0	0.0	chr1	234508530	234508577	(14447845)	C	L3	LINE/CR1	(1)	4098	4050	347997
2409	7.7	0.3	0.0	chr1	234508585	234508881	(14447541)	C	AluSc	SINE/Alu	(11)	298	1	347998
2518	7.4	0.3	0.0	chr1	234509201	234509511	(14446911)	+	AluSp	SINE/Alu	1	312	(1)	347999
759	33.4	8.6	3.8	chr1	234543600	234543966	(14412456)	+	X6B_LINE	LINE/CR1	682	1067	(5)	348050
55	0.0	0.0	0.0	chr1	234545000	234545046	(14411376)	+	(GT)n	Simple_repeat	1	47	(0)	348059
14	16.2	1.8	8.6	chr1	234608656	234608712	(14347710)	+	(GCGGCC)n	Simple_repeat	1	58	(0)	348163
16	17.7	2.6	0.0	chr1	234609455	234609492	(14346930)	+	(GCC)n	Simple_repeat	1	39	(0)	348164
19	7.2	0.0	0.0	chr1	234609516	234609544	(14346878)	+	(GGA)n	Simple_repeat	1	29	(0)	348165
46	0.0	0.0	0.0	chr1	234723720	234723758	(14232664)	+	(TG)n	Simple_repeat	1	39	(0)	348334
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
5972	19.5	5.6	4.6	chr1	234936435	234937336	(14019086)	+	Looper	DNA/PiggyBac	12	954	(603)	348691
27	0.0	0.0	0.0	chr1	234937337	234937362	(14019060)	+	(TGTT)n	Simple_repeat	1	26	(0)	348692
5972	19.5	5.6	4.6	chr1	234937363	234937383	(14019039)	+	Looper	DNA/PiggyBac	955	955	(602)	348691
1800	17.1	0.0	2.3	chr1	234937384	234937682	(14018740)	C	AluJr	SINE/Alu	(20)	292	1	348693
299	31.2	1.8	0.9	chr1	235012344	235012456	(13943966)	+	MIRc	SINE/MIR	120	233	(35)	348833
13	22.1	5.6	1.8	chr1	235327257	235327310	(13629112)	+	(GCCCGGC)n	Simple_repeat	1	57	(0)	349500
2426	8.1	0.0	0.7	chr1	235505383	235505689	(13450733)	C	AluSx1	SINE/Alu	(7)	305	1	349878
8013	8.4	0.4	0.7	chr1	235844972	235846056	(13110366)	+	L1PB1	LINE/L1	252	1333	(5529)	350483
24490	9.1	2.1	0.9	chr1	235846062	235851563	(13104859)	+	L1PB1	LINE/L1	1297	6865	(2)	350483
2299	12.1	0.0	0.0	chr1	235862514	235862803	(13093619)	+	AluSx1	SINE/Alu	1	290	(22)	350507
49	0.0	0.0	0.0	chr1	235862807	235862848	(13093574)	+	(AC)n	Simple_repeat	1	42	(0)	350508
839	15.3	2.8	0.0	chr1	235862872	235863008	(13093414)	+	LTR54	LTR/ERV1	370	510	(0)	350504
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
963	24.9	7.7	1.5	chr1	236085380	236085709	(12870713)	C	L2a	LINE/L2	(137)	3289	2938	350965
100	29.5	3.4	1.5	chr1	236085710	236086161	(12870261)	+	(TG)n	Simple_repeat	1	460	(0)	350966
253	23.5	3.3	0.6	chr1	236101445	236102135	(12854287)	+	(TG)n	Simple_repeat	1	714	(0)	351005
298	30.3	8.2	4.1	chr1	236102169	236102436	(12853986)	+	L2c	LINE/L2	3099	3378	(9)	351006
16	14.3	0.0	6.8	chr1	236281579	236281622	(12674800)	+	(GGCCC)n	Simple_repeat	1	44	(0)	351303
13	21.9	2.3	2.2	chr1	236395330	236395373	(12561049)	+	(TCCCGGC)n	Simple_repeat	1	45	(0)	351538
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
442	23.4	0.0	0.0	chr1	236494762	236494868	(12461554)	+	L1MB5	LINE/L1	6050	6156	(18)	351752
1284	18.2	2.3	0.0	chr1	236494957	236495165	(12461257)	+	AluJr	SINE/Alu	87	300	(12)	351753
251	25.3	4.5	6.6	chr1	236515495	236515637	(12440785)	C	Zaphod2	DNA/hAT-Tip100	(9)	3515	3467	351805
272	30.1	15.8	0.0	chr1	237005604	237005736	(11950686)	+	L2a	LINE/L2	3269	3426	(0)	352629
34	3.0	0.0	0.0	chr1	237005748	237005781	(11950641)	+	(AC)n	Simple_repeat	1	34	(0)	352630
867	30.2	4.0	7.7	chr1	237034290	237034806	(11921616)	+	MLT1J	LTR/ERVL-MaLR	1	587	(8)	352668
14	27.7	1.6	3.1	chr1	237042597	237042660	(11913762)	+	G-rich	Low_complexity	1	65	(0)	352680
2523	8.8	1.6	0.3	chr1	237152644	237153007	(11803415)	+	L1PA10	LINE/L1	4978	5346	(800)	352843
1541	26.1	6.2	1.0	chr1	241423267	241423789	(7532633)	C	L1MB8	LINE/L1	(7)	6171	5620	359282
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
5402	13.4	4.7	4.8	chr1	244719462	244719965	(4236457)	C	L1MC2	LINE/L1	(649)	5695	5205	364608
492	28.0	5.6	0.0	chr1	244719935	244720120	(4236302)	C	L1ME3D	LINE/L1	(1785)	4534	4338	364594
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
26	6.3	0.0	0.0	chr1	244864025	244864058	(4092364)	+	(CTTCCT)n	Simple_repeat	1	34	(0)	364913
2327	9.0	1.6	1.3	chr1	245106763	245107074	(3849348)	+	AluSq2	SINE/Alu	1	313	(0)	365481
293	24.8	3.4	4.2	chr10	1498792	1499934	(132297488)	+	(TCATCAT)n	Simple_repeat	1	1182	(0)	372646
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
520	18.8	9.5	0.0	chr10	5853443	5853575	(127943847)	+	MLT1G3	LTR/ERVL-MaLR	39	185	(394)	378443
684	12.4	8.9	0.0	chr10	5853576	5853688	(127943734)	C	AluYh3a3	SINE/Alu	(14)	278	155	378444
666	2.7	0.0	0.0	chr10	5853711	5853783	(127943639)	C	tRNA-Val-GTA	tRNA	(3)	73	1	378445
2143	12.5	0.0	1.0	chr10	5853825	5854113	(127943309)	+	AluSx	SINE/Alu	1	286	(26)	378446
14	22.8	0.0	4.4	chr10	11165375	11165419	(122632003)	+	(CTC)n	Simple_repeat	1	45	(0)	386566
13	18.9	2.8	0.0	chr10	12069191	12069226	(121728196)	+	G-rich	Low_complexity	1	37	(0)	388082
2457	7.4	0.3	0.0	chr10	12263925	12264223	(121533199)	C	AluSq	SINE/Alu	(13)	300	1	388526
2510	7.6	0.0	0.0	chr10	13098711	13099014	(120698408)	C	AluSx4	SINE/Alu	(6)	304	1	390106
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
208	31.1	0.5	0.2	chr10	15149048	15149619	(118647803)	+	(CCA)n	Simple_repeat	1	575	(0)	393716
1407	23.5	11.1	6.9	chr10	15431312	15431600	(118365822)	C	L1MC5	LINE/L1	(239)	9065	8791	394247
3556	11.9	0.9	4.2	chr10	15431601	15431975	(118365447)	+	MER1A	DNA/hAT-Charlie	3	376	(153)	394249
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
48	0.0	0.0	0.0	chr10	15434587	15434627	(118362795)	+	(CA)n	Simple_repeat	1	41	(0)	394254
46	0.0	0.0	0.0	chr10	15635919	15635957	(118161465)	+	(AC)n	Simple_repeat	1	39	(0)	394595
307	33.2	4.7	11.2	chr10	15813203	15813686	(117983736)	+	L2a	LINE/L2	2920	3425	(1)	394839
585	33.7	6.8	9.3	chr10	15871874	15872443	(117924979)	C	L1MEd	LINE/L1	(6415)	688	134	394917
2586	10.5	0.0	1.4	chr10	15939426	15939792	(117857630)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	395021
1004	5.2	1.5	5.0	chr10	20886049	20886189	(112911233)	+	L1PA10	LINE/L1	6025	6160	(8)	402647
2310	9.8	0.0	2.7	chr10	21097171	21097466	(112699956)	+	AluSg	SINE/Alu	1	288	(22)	402975
13	14.1	0.0	5.7	chr10	21526051	21526085	(112271337)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	403870
13	8.4	13.2	0.0	chr10	22251938	22251977	(111545445)	+	A-rich	Low_complexity	1	45	(0)	404995
17	24.0	0.0	6.1	chr10	22252433	22252498	(111544924)	+	G-rich	Low_complexity	1	66	(0)	404996
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
478	29.5	7.8	2.9	chr10	22616325	22616495	(111180927)	C	MIRb	SINE/MIR	(34)	234	55	405517
12	24.6	3.6	3.5	chr10	22713358	22713413	(111084009)	+	(CCGC)n	Simple_repeat	1	58	(0)	405676
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
13	23.3	3.0	5.8	chr10	27155282	27155348	(106642074)	+	G-rich	Low_complexity	1	69	(0)	412953
237	32.6	6.2	0.0	chr10	27243132	27243266	(106554156)	+	Helitron3Na_Mam	RC/Helitron	12	155	(331)	413149
381	30.1	10.0	4.1	chr10	27243546	27243742	(106553680)	+	MIRb	SINE/MIR	11	220	(48)	413150
410	29.9	11.3	5.8	chr10	28984699	28984800	(104812622)	+	MIRb	SINE/MIR	13	126	(142)	416078
2285	9.2	0.3	0.0	chr10	28984801	28985119	(104812303)	C	AluSp	SINE/Alu	(0)	313	1	416079
51	0.0	0.0	0.0	chr10	29258623	29258666	(104538756)	+	(CA)n	Simple_repeat	1	44	(0)	416578
21	0.0	3.9	0.0	chr10	29258667	29258692	(104538730)	+	(GA)n	Simple_repeat	1	27	(0)	416579
481	30.0	4.6	8.7	chr10	29258693	29258811	(104538611)	+	L1ME4a	LINE/L1	5316	5430	(694)	416577
1670	19.0	0.3	1.4	chr10	29258812	29259095	(104538327)	+	AluJo	SINE/Alu	2	282	(30)	416580
46	2.3	0.0	0.0	chr10	29329672	29329715	(104467707)	+	(TG)n	Simple_repeat	1	44	(0)	416697
14	12.2	0.0	0.0	chr10	30348972	30348998	(103448424)	+	(GAGAG)n	Simple_repeat	1	27	(0)	418533
20	0.0	0.0	0.0	chr10	30349280	30349301	(103448121)	+	(A)n	Simple_repeat	1	22	(0)	418534
18	17.8	2.2	2.1	chr10	31319443	31319488	(102477934)	+	(CCG)n	Simple_repeat	1	47	(0)	420165
16	26.5	1.6	3.2	chr10	31319540	31319601	(102477821)	+	(CCG)n	Simple_repeat	1	63	(0)	420165
17	16.7	2.4	2.3	chr10	32056201	32056242	(101741180)	+	(GGC)n	Simple_repeat	1	43	(0)	421235
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
21	10.0	3.0	0.0	chr10	34727812	34727844	(99069578)	+	(CA)n	Simple_repeat	1	34	(0)	425172
34	0.0	0.0	0.0	chr10	34727879	34727907	(99069515)	+	(CA)n	Simple_repeat	1	29	(0)	425172
13	25.9	0.0	2.3	chr10	35643358	35643400	(98154022)	+	(GCC)n	Simple_repeat	1	43	(0)	426872
12	19.9	2.9	0.0	chr10	35643412	35643446	(98153976)	+	G-rich	Low_complexity	1	36	(0)	426873
60	27.1	6.0	0.0	chr10	35643632	35643847	(98153575)	+	(TC)n	Simple_repeat	1	229	(0)	426874
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
1583	16.7	5.0	1.3	chr10	44245316	44245624	(89551798)	C	L1MB2	LINE/L1	(3)	6168	5848	434623
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
5423	4.8	1.1	1.8	chr10	45330097	45330960	(88466462)	C	SVA_D	Retroposon/SVA	(17)	1369	1	435946
12	20.4	0.0	0.0	chr10	46030399	46030427	(87766995)	+	GA-rich	Low_complexity	1	29	(0)	437045
323	29.0	0.8	4.6	chr10	47377342	47377471	(86419951)	+	MLT1N2	LTR/ERVL-MaLR	436	560	(2)	439108
18	11.7	0.0	0.0	chr10	47377540	47377567	(86419855)	+	(CA)n	Simple_repeat	1	28	(0)	439109
44	0.0	0.0	0.0	chr10	47377601	47377638	(86419784)	+	(CA)n	Simple_repeat	1	38	(0)	439109
55	0.0	0.0	0.0	chr10	47377672	47377718	(86419704)	+	(CA)n	Simple_repeat	1	47	(0)	439109
2392	16.0	3.5	5.7	chr10	59608267	59608889	(74188533)	+	L1MD2	LINE/L1	5102	5717	(642)	455804
1255	23.9	8.4	3.2	chr10	59608884	59609037	(74188385)	+	L1MD2	LINE/L1	5967	6136	(223)	455804
30	0.0	0.0	0.0	chr10	59609038	59609063	(74188359)	+	(AC)n	Simple_repeat	1	26	(0)	455805
1255	23.9	8.4	3.2	chr10	59609064	59609161	(74188261)	+	L1MD2	LINE/L1	6137	6249	(110)	455804
2610	9.2	0.0	0.0	chr10	59609162	59609465	(74187957)	+	AluSx	SINE/Alu	1	304	(8)	455806
2846	11.0	1.1	0.7	chr10	60828464	60828883	(72968539)	+	L1MD	LINE/L1	5357	5780	(520)	457676
245	24.2	1.6	0.0	chr10	61990052	61990113	(71807309)	C	Charlie2a	DNA/hAT-Charlie	(2798)	63	1	459392
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
475	24.5	5.3	14.7	chr10	67765042	67765094	(66032328)	+	L1ME4a	LINE/L1	5783	5839	(285)	467833
2848	1.3	0.0	0.3	chr10	67765095	67765398	(66032024)	+	AluYi6	SINE/Alu	1	303	(8)	467834
58	7.6	0.0	1.2	chr10	67849220	67849359	(65948063)	+	(GGAGG)n	Simple_repeat	1	138	(0)	468032
2531	5.4	0.0	0.3	chr10	68956761	68957055	(64840367)	+	AluSg	SINE/Alu	1	294	(16)	470524
258	28.7	18.4	5.0	chr10	69317205	69317325	(64480097)	C	MIRb	SINE/MIR	(10)	258	118	471357
2526	7.4	0.7	0.0	chr10	69508162	69508470	(64288952)	+	AluSx3	SINE/Alu	1	311	(0)	471749
217	27.1	1.7	1.7	chr10	69629827	69629886	(64167536)	+	L2c	LINE/L2	3264	3323	(64)	471960
17	21.3	4.0	6.3	chr10	69630003	69630078	(64167344)	+	(CTT)n	Simple_repeat	1	79	(0)	471961
14	18.5	2.7	9.2	chr10	69630061	69630134	(64167288)	+	(CCTCCCA)n	Simple_repeat	1	76	(0)	471962
215	25.8	0.2	0.8	chr10	69791781	69792290	(64005132)	+	(CAC)n	Simple_repeat	1	511	(0)	472270
13	5.2	0.0	0.0	chr10	70145987	70146006	(63651416)	+	(CTC)n	Simple_repeat	1	20	(0)	472841
2078	9.8	0.0	3.9	chr10	70378362	70378504	(63418918)	+	AluSq2	SINE/Alu	2	133	(180)	473329
2058	8.9	5.2	0.7	chr10	70378505	70378796	(63418626)	+	AluSq2	SINE/Alu	1	306	(7)	473330
15	15.0	2.4	4.8	chr10	70404332	70404372	(63393050)	+	(GCC)n	Simple_repeat	1	42	(0)	473405
241	26.7	5.4	8.3	chr10	71091247	71091400	(62706022)	C	L2c	LINE/L2	(707)	2712	2562	474642
2120	10.9	2.0	1.4	chr10	71091401	71091694	(62705728)	+	AluSq2	SINE/Alu	1	296	(17)	474645
283	27.4	5.6	0.6	chr10	71216077	71216216	(62581206)	C	MIRc	SINE/MIR	(49)	159	7	474807
1178	27.4	7.6	3.2	chr10	71323271	71323737	(62473685)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	15	475005
223	31.1	0.0	1.3	chr10	72355122	72355196	(61442226)	C	MIR3	SINE/MIR	(33)	175	102	477094
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
28	28.2	1.6	4.0	chr10	73495826	73495949	(60301473)	+	G-rich	Low_complexity	1	126	(0)	479398
3963	15.6	1.4	1.0	chr10	74799626	74800266	(58997156)	+	L1MB3	LINE/L1	5490	6138	(45)	481861
24	31.9	1.0	1.9	chr10	74826673	74826776	(58970646)	+	(GGC)n	Simple_repeat	1	105	(0)	481944
20	24.1	3.6	0.0	chr10	75402683	75402737	(58394685)	+	GA-rich	Low_complexity	1	57	(0)	483056
25	10.5	0.0	0.0	chr10	75469569	75469609	(58327813)	+	(TGTG)n	Simple_repeat	1	41	(0)	483146
53	21.4	0.7	4.1	chr10	75709323	75709467	(58087955)	+	(GTATGT)n	Simple_repeat	1	146	(0)	483495
572	27.3	3.8	6.8	chr10	76086768	76087015	(57710407)	C	UCON89	DNA/hAT?	(0)	242	3	484035
204	23.7	11.4	3.1	chr10	76087310	76087405	(57710017)	+	MIR3	SINE/MIR	100	204	(4)	484036
36	2.9	0.0	0.0	chr10	76429024	76429058	(57368364)	+	(AC)n	Simple_repeat	1	35	(0)	484489
19	0.0	0.0	0.0	chr10	76547495	76547518	(57249904)	+	(ATTT)n	Simple_repeat	1	24	(0)	484646
12	8.0	7.4	0.0	chr10	76547645	76547671	(57249751)	+	(CTTT)n	Simple_repeat	1	29	(0)	484647
495	18.3	5.4	3.7	chr10	77470983	77472174	(56325248)	+	(AC)n	Simple_repeat	1	1230	(0)	485983
105	29.3	0.0	3.5	chr10	77537971	77538337	(56259085)	+	(AC)n	Simple_repeat	1	367	(0)	486119
41	11.9	0.0	0.0	chr10	77637464	77637528	(56159894)	+	(GAG)n	Simple_repeat	1	65	(0)	486308
38	4.8	0.0	0.0	chr10	77637587	77637630	(56159792)	+	(CCG)n	Simple_repeat	1	44	(0)	486309
79	4.9	0.0	0.0	chr10	79114457	79114541	(54682881)	+	(GT)n	Simple_repeat	1	85	(0)	489081
14	11.2	3.5	0.0	chr10	79114544	79114578	(54682844)	+	(GGAG)n	Simple_repeat	1	36	(0)	489082
266	23.4	2.9	1.1	chr10	86116943	86117657	(47679765)	+	(ACCATC)n	Simple_repeat	1	736	(0)	499012
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
2452	6.7	1.0	0.0	chr10	86938882	86939181	(46858241)	+	AluSp	SINE/Alu	2	304	(9)	500444
2575	6.8	0.0	0.0	chr10	86939183	86939491	(46857931)	+	AluSg	SINE/Alu	2	310	(0)	500445
2712	5.3	0.0	3.1	chr10	87202966	87203284	(46594138)	+	AluY	SINE/Alu	3	311	(0)	500920
1645	22.4	10.7	3.7	chr10	87203285	87203321	(46594101)	+	L1M5	LINE/L1	4586	4616	(1530)	500919
44	0.0	0.0	0.0	chr10	87203330	87203367	(46594055)	+	(TG)n	Simple_repeat	1	38	(0)	500921
23	0.0	0.0	0.0	chr10	87203368	87203392	(46594030)	+	(AG)n	Simple_repeat	1	25	(0)	500922
403	28.4	4.5	0.7	chr10	87203523	87203671	(46593751)	+	LTR41B	LTR/ERVL	1	155	(603)	500923
209	30.1	13.3	2.0	chr10	87659195	87659340	(46138082)	+	MIRb	SINE/MIR	14	178	(90)	501618
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
278	29.1	2.5	0.0	chr10	88078173	88078251	(45719171)	+	UCON55	DNA/TcMar-Tigger	41	121	(71)	502286
2360	5.7	0.3	0.3	chr10	92592356	92592637	(41204785)	+	AluSx	SINE/Alu	1	282	(30)	509469
35	0.0	0.0	0.0	chr10	92592639	92592668	(41204754)	+	(CA)n	Simple_repeat	1	30	(0)	509470
311	27.8	9.5	0.0	chr10	92592773	92592905	(41204517)	C	MIR	SINE/MIR	(20)	242	96	509471
264	31.0	1.1	0.0	chr10	92839412	92839498	(40957924)	+	MER117	DNA/hAT-Charlie	1	88	(109)	510000
18	21.9	1.6	4.6	chr10	92848404	92848467	(40948955)	+	(CCCCG)n	Simple_repeat	1	65	(0)	510022
12	10.4	6.1	2.9	chr10	92848751	92848783	(40948639)	+	G-rich	Low_complexity	1	35	(0)	510023
629	29.7	5.0	0.9	chr10	93701799	93702029	(40095393)	+	MIR	SINE/MIR	12	252	(10)	511622
2141	16.4	0.0	0.0	chr10	94673327	94673638	(39123784)	C	AluJb	SINE/Alu	(0)	312	1	513420
259	20.0	0.0	0.0	chr10	94673640	94673684	(39123738)	+	HERVL74-int	LTR/ERVL	4029	4073	(1612)	513419
2279	22.1	2.1	10.2	chr10	94673676	94674087	(39123335)	+	HERVL74-int	LTR/ERVL	4589	4942	(743)	513419
4173	19.4	2.5	6.7	chr10	95132811	95133902	(38663520)	C	HUERS-P3-int	LTR/ERV1	(6351)	1067	23	513805
3825	17.2	6.8	3.8	chr10	96124232	96125093	(37672329)	C	L1M4c	LINE/L1	(5493)	2074	1186	515430
40	0.0	2.4	2.3	chr10	96229655	96229696	(37567726)	+	(TG)n	Simple_repeat	1	43	(0)	515592
1923	14.6	0.3	2.3	chr10	96640660	96640961	(37156461)	C	AluJr	SINE/Alu	(15)	297	2	516331
47	2.3	0.0	0.0	chr10	96641087	96641131	(37156291)	+	(GT)n	Simple_repeat	1	45	(0)	516332
20	5.5	4.8	4.5	chr10	96832407	96832448	(36964974)	+	(CCG)n	Simple_repeat	1	44	(0)	516802
628	28.0	9.0	3.1	chr10	97024564	97024887	(36772535)	+	MamRep4096	DNA/hAT-Tip100	42	386	(40)	517113
2197	9.9	0.0	4.3	chr10	97024988	97025311	(36772111)	+	AluSq	SINE/Alu	1	310	(3)	517114
2429	20.7	8.3	0.0	chr10	97069765	97070286	(36727136)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	517198
19	23.8	0.0	0.0	chr10	97318957	97319005	(36478417)	+	(GTGT)n	Simple_repeat	1	49	(0)	517718
15	31.5	3.4	4.9	chr10	97713625	97713743	(36083679)	+	GA-rich	Low_complexity	1	123	(0)	518570
25	23.3	2.8	5.5	chr10	97713845	97713950	(36083472)	+	(CGC)n	Simple_repeat	1	109	(0)	518571
600	30.3	12.1	7.9	chr10	97726499	97726853	(36070569)	C	MLT1J2	LTR/ERVL-MaLR	(16)	432	61	518603
3267	13.5	1.3	4.8	chr10	98126061	98126586	(35670836)	C	L1PB1	LINE/L1	(5720)	1143	636	519422
344	27.7	11.9	2.1	chr10	98309552	98309695	(35487727)	+	MIR3	SINE/MIR	3	162	(46)	519693
10458	15.3	2.6	2.7	chr10	99265617	99267502	(34529920)	+	L1PB1	LINE/L1	258	2145	(4718)	521157
12	20.1	7.5	1.8	chr10	99329299	99329351	(34468071)	+	(CTCCGG)n	Simple_repeat	1	57	(0)	521275
18	14.0	0.0	0.0	chr10	99329390	99329421	(34468001)	+	(GGC)n	Simple_repeat	1	32	(0)	521276
11	27.7	0.0	2.2	chr10	99329484	99329528	(34467894)	+	(CCCCGGC)n	Simple_repeat	1	45	(0)	521277
516	29.3	16.0	4.9	chr10	99374728	99375514	(34421908)	C	L2c	LINE/L2	(0)	3387	2489	521360
913	22.6	2.5	4.4	chr10	99994122	99994371	(33803051)	+	MIR	SINE/MIR	10	254	(8)	522480
15	0.0	0.0	0.0	chr10	100228977	100228993	(33568429)	+	(GC)n	Simple_repeat	1	17	(0)	522978
38	0.0	0.0	0.0	chr10	100228994	100229026	(33568396)	+	(CA)n	Simple_repeat	1	33	(0)	522979
18	28.7	1.6	1.6	chr10	100229115	100229175	(33568247)	+	(CA)n	Simple_repeat	1	62	(0)	522980
17	4.9	0.0	0.0	chr10	100535881	100535901	(33261521)	+	(T)n	Simple_repeat	1	21	(0)	523518
50	22.4	2.2	5.4	chr10	100655870	100656049	(33141373)	+	(TCC)n	Simple_repeat	1	184	(0)	523737
16	30.8	6.4	0.0	chr10	100729456	100729549	(33067873)	+	(CCTCT)n	Simple_repeat	1	100	(0)	523887
13	18.7	4.9	8.2	chr10	101031746	101031826	(32765596)	+	G-rich	Low_complexity	1	85	(0)	524362
2017	13.8	0.7	0.7	chr10	101052469	101052764	(32744658)	+	AluSx3	SINE/Alu	1	296	(15)	524390
1943	17.2	0.0	0.7	chr10	101052770	101053072	(32744350)	+	AluJo	SINE/Alu	1	301	(11)	524391
14	4.0	7.7	0.0	chr10	101298292	101298317	(32499105)	+	(CAGG)n	Simple_repeat	1	28	(0)	524839
21	4.0	0.0	0.0	chr10	101442263	101442288	(32355134)	+	(TC)n	Simple_repeat	1	26	(0)	525127
31	3.3	0.0	0.0	chr10	101442289	101442319	(32355103)	+	(TG)n	Simple_repeat	1	31	(0)	525128
19	4.0	0.0	0.0	chr10	101694598	101694623	(32102799)	+	(CCT)n	Simple_repeat	1	26	(0)	525477
34	0.0	0.0	0.0	chr10	101830682	101830710	(31966712)	+	(CA)n	Simple_repeat	1	29	(0)	525757
17	17.7	6.6	3.1	chr10	102117635	102117695	(31679727)	+	(TCC)n	Simple_repeat	1	65	(0)	526326
22	25.9	4.3	0.0	chr10	102117843	102117911	(31679511)	+	(TG)n	Simple_repeat	1	72	(0)	526327
12	23.3	2.0	4.0	chr10	102133208	102133256	(31664166)	+	(GCGGCAG)n	Simple_repeat	1	50	(0)	526366
2073	20.2	5.0	4.5	chr10	102455857	102456339	(31341083)	+	MLT1D	LTR/ERVL-MaLR	21	505	(0)	526962
1371	7.6	0.0	6.1	chr10	102854662	102854859	(30942563)	+	AluSp	SINE/Alu	32	217	(96)	527720
2229	9.2	0.0	3.8	chr10	102855749	102856062	(30941360)	C	AluSx1	SINE/Alu	(10)	302	1	527725
710	24.4	11.8	3.7	chr10	102856063	102856122	(30941300)	C	L2a	LINE/L2	(237)	3189	3126	527724
1655	24.9	3.9	8.1	chr10	102856126	102856270	(30941152)	+	Tigger13a	DNA/TcMar-Tigger	75	212	(559)	527726
913	13.6	2.2	0.0	chr10	102856271	102856402	(30941020)	+	FLAM_C	SINE/Alu	1	135	(8)	527727
26	14.1	8.6	0.0	chr10	102918607	102918676	(30878746)	+	(GCGGCT)n	Simple_repeat	1	76	(0)	527859
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
18	28.1	1.4	4.2	chr10	103492030	103492099	(30305323)	+	(GT)n	Simple_repeat	1	71	(0)	529078
257	29.0	0.0	0.0	chr10	103599107	103599168	(30198254)	+	MIR3	SINE/MIR	64	125	(83)	529283
225	19.4	6.1	0.0	chr10	103599171	103599232	(30198190)	+	CR1-3_Croc	LINE/CR1	3539	3604	(1)	529284
122	25.6	3.2	1.9	chr10	103836304	103836706	(29960716)	+	(AC)n	Simple_repeat	1	416	(0)	529740
539	25.1	4.5	2.7	chr10	103896173	103896430	(29900992)	C	L2a	LINE/L2	(0)	3426	3114	529859
13	21.2	9.8	3.0	chr10	104231968	104232059	(29565363)	+	G-rich	Low_complexity	1	101	(0)	530386
1333	21.4	0.0	0.4	chr10	109956577	109956801	(23840621)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	538672
873	20.6	5.7	9.8	chr10	109956815	109957088	(23840334)	+	MLT1K	LTR/ERVL-MaLR	332	593	(2)	538663
22	22.1	0.0	3.6	chr10	110207604	110207659	(23589763)	+	(CA)n	Simple_repeat	1	56	(0)	539103
36	0.0	0.0	0.0	chr10	113679023	113679053	(20118369)	+	(GT)n	Simple_repeat	1	31	(0)	544717
279	31.8	9.6	0.0	chr10	114303654	114303804	(19493618)	+	L2	LINE/L2	2683	2849	(570)	545715
34	6.8	0.0	0.0	chr10	116273635	116273646	(17523776)	+	(CA)n	Simple_repeat	1	12	(0)	548528
52	2.1	0.0	0.0	chr10	116273647	116273695	(17523727)	+	(CT)n	Simple_repeat	1	49	(0)	548529
34	6.8	0.0	0.0	chr10	116273696	116273729	(17523693)	+	(CA)n	Simple_repeat	1	34	(0)	548530
17	7.0	0.0	5.9	chr10	116273912	116273945	(17523477)	+	(CACACT)n	Simple_repeat	1	34	(0)	548531
65	21.4	0.0	0.0	chr10	117542303	117542494	(16254928)	+	GA-rich	Low_complexity	1	192	(0)	550654
13572	8.3	11.4	1.2	chr10	118660589	118662884	(15134538)	C	L1PBa	LINE/L1	(3669)	3193	634	552393
25	11.5	2.0	2.0	chr10	119596497	119596545	(14200877)	+	G-rich	Low_complexity	1	50	(0)	554191
18	7.6	0.0	0.0	chr10	119596640	119596667	(14200755)	+	(AGG)n	Simple_repeat	1	28	(0)	554192
1862	21.8	14.5	5.7	chr10	120221934	120222620	(13574802)	+	LTR41	LTR/ERVL	8	765	(3)	555312
889	31.5	6.6	7.3	chr10	121426369	121426974	(12370448)	+	LTR67B	LTR/ERVL	19	620	(0)	557144
2260	10.4	0.0	0.0	chr10	121823009	121823323	(11974099)	+	AluY	SINE/Alu	1	311	(0)	557758
12	22.3	8.8	0.0	chr10	121928210	121928266	(11869156)	+	G-rich	Low_complexity	1	62	(0)	557960
275	19.5	5.8	0.5	chr10	121928615	121928690	(11868732)	C	MIRc	SINE/MIR	(72)	158	81	557961
39	0.0	0.0	0.0	chr10	122980724	122980759	(10816663)	+	(GCGGG)n	Simple_repeat	1	36	(0)	559574
18	25.7	0.0	0.0	chr10	123008737	123008784	(10788638)	+	(GCC)n	Simple_repeat	1	48	(0)	559613
2045	7.3	0.3	10.9	chr10	124093835	124094164	(9703258)	C	AluSp	SINE/Alu	(18)	295	1	561347
198	26.3	0.0	0.2	chr10	124305897	124306362	(9491060)	+	(CAT)n	Simple_repeat	1	466	(0)	561669
449	21.0	18.2	1.7	chr10	124323129	124323301	(9474121)	C	MLT1J2	LTR/ERVL-MaLR	(3)	441	244	561702
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
12	27.3	2.0	2.0	chr10	124916806	124916855	(8880567)	+	(GGC)n	Simple_repeat	1	51	(0)	562764
16	10.1	2.9	2.9	chr10	124917084	124917117	(8880305)	+	(GGC)n	Simple_repeat	1	35	(0)	562765
18	31.3	1.2	1.2	chr10	125823630	125823709	(7973713)	+	GA-rich	Low_complexity	1	81	(0)	564061
13	24.9	2.9	5.6	chr10	126905328	126905396	(6892026)	+	(CCGTC)n	Simple_repeat	1	71	(0)	565517
18	24.5	0.0	4.8	chr10	130136409	130136471	(3660951)	+	(GGC)n	Simple_repeat	1	63	(0)	569159
19	18.0	5.2	1.6	chr10	130136516	130136573	(3660849)	+	G-rich	Low_complexity	1	61	(0)	569160
13	16.5	5.7	5.4	chr10	132176401	132176453	(1620969)	+	(CTG)n	Simple_repeat	1	56	(0)	571397
12	13.6	6.8	4.3	chr10	132223018	132223061	(1574361)	+	(GCCCACCA)n	Simple_repeat	1	47	(0)	571430
349	33.3	4.8	0.0	chr10	132227271	132227390	(1570032)	+	MIRb	SINE/MIR	126	251	(17)	571432
35	8.7	0.0	0.0	chr10	132227588	132227637	(1569785)	+	(TGGTGA)n	Simple_repeat	1	50	(0)	571433
30	7.5	0.0	0.0	chr10	132965825	132965867	(831555)	+	(GTGTTTACAT)n	Simple_repeat	1	43	(0)	572085
878	28.2	5.4	2.8	chr10	132965869	132966266	(831156)	C	L1MC4	LINE/L1	(121)	7921	7513	572086
590	23.1	6.5	1.1	chr10	133307770	133307944	(489478)	C	Tigger3c	DNA/TcMar-Tigger	(47)	555	371	572365
809	17.2	0.7	6.8	chr10	133307945	133308107	(489315)	+	AluJo	SINE/Alu	121	273	(39)	572366
2146	11.1	7.7	0.6	chr10	133388147	133388473	(408949)	C	L1PA13	LINE/L1	(7)	6156	5805	572475
1977	25.1	7.4	7.7	chr10	133388474	133388718	(408704)	C	Charlie1a	DNA/hAT-Charlie	(1208)	247	1	572469
237	23.4	25.6	1.3	chr11	236641	236796	(134849826)	C	MIRb	SINE/MIR	(8)	260	54	573122
14	16.4	2.9	0.0	chr11	842514	842547	(134244075)	+	(CGGCC)n	Simple_repeat	1	35	(0)	574012
4701	17.2	3.1	1.5	chr11	1772069	1772452	(133314170)	+	L1MC2	LINE/L1	5828	6230	(114)	575065
36	7.2	0.0	0.0	chr11	1772455	1772498	(133314124)	+	(GT)n	Simple_repeat	1	44	(0)	575067
711	25.9	1.3	0.3	chr11	2041709	2043579	(133043043)	+	(TCCATTC)n	Simple_repeat	1	1896	(0)	575346
85	33.0	0.6	1.2	chr11	2044744	2044909	(133041713)	+	(CTCCATT)n	Simple_repeat	6	169	(0)	575353
312	33.9	8.2	5.9	chr11	2044910	2045232	(133041390)	C	L1MEg	LINE/L1	(5023)	1061	731	575354
402	13.4	7.6	1.2	chr11	2187174	2188103	(132898519)	+	(CA)n	Simple_repeat	1	1001	(0)	575513
386	33.8	0.5	0.7	chr11	2428421	2429753	(132656869)	+	(GTG)n	Simple_repeat	1	1339	(0)	575789
19	11.2	5.8	3.6	chr11	2885520	2885571	(132201051)	+	GA-rich	Low_complexity	1	55	(0)	576274
28	5.8	0.0	0.0	chr11	2929454	2929489	(132157133)	+	(GCCCC)n	Simple_repeat	1	36	(0)	576321
2070	17.8	3.1	2.6	chr11	3378319	3378739	(131707883)	+	MER57E3	LTR/ERV1	65	487	(0)	576928
3284	15.0	6.6	2.9	chr11	3962079	3962445	(131124177)	C	L1PB4	LINE/L1	(3)	6153	5790	578095
36	0.0	0.0	0.0	chr11	3962446	3962476	(131124146)	+	(TG)n	Simple_repeat	1	31	(0)	578096
3284	15.0	6.6	2.9	chr11	3962477	3962761	(131123861)	C	L1PB4	LINE/L1	(367)	5789	5476	578095
18	7.8	0.0	0.0	chr11	4187448	4187474	(130899148)	+	(GCG)n	Simple_repeat	1	27	(0)	578501
17	12.0	4.8	7.6	chr11	6234639	6234701	(128851921)	+	(CCGCGCC)n	Simple_repeat	1	66	(0)	580991
220	14.0	0.0	5.7	chr11	9760073	9760125	(125326497)	+	L2c	LINE/L2	3338	3387	(0)	586503
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
21	0.0	0.0	0.0	chr11	12707115	12707137	(122379485)	+	(T)n	Simple_repeat	1	23	(0)	591198
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
12	20.8	6.8	0.0	chr11	14891919	14891962	(120194660)	+	(GGCCC)n	Simple_repeat	1	47	(0)	594638
12	28.9	0.0	0.0	chr11	16607416	16607457	(118479165)	+	A-rich	Low_complexity	1	42	(0)	597237
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
1047	21.1	0.0	0.0	chr11	17260562	17260736	(117825886)	+	FAM	SINE/Alu	1	175	(10)	598424
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
19	0.0	3.3	3.2	chr11	33257658	33257687	(101828935)	+	(AGC)n	Simple_repeat	1	31	(0)	623168
629	28.6	1.0	4.2	chr11	33507819	33508033	(101578589)	C	LTR67B	LTR/ERVL	(4)	616	409	623645
606	25.0	8.0	1.2	chr11	33508127	33508288	(101578334)	C	LTR67B	LTR/ERVL	(446)	174	1	623645
14	19.3	6.4	0.0	chr11	33774502	33774548	(101312074)	+	(CCTGGC)n	Simple_repeat	1	50	(0)	624031
309	36.1	4.2	1.7	chr11	36289123	36289309	(98797313)	C	MIR3	SINE/MIR	(46)	222	19	628185
15	4.7	0.0	0.0	chr11	43358854	43358875	(91727747)	+	(CTC)n	Simple_repeat	1	22	(0)	638336
287	25.7	6.3	13.9	chr11	46237228	46237435	(88849187)	C	L2b	LINE/L2	(181)	3194	3004	643568
31	0.0	3.0	0.0	chr11	47408554	47408586	(87678036)	+	(GGCCGGGC)n	Simple_repeat	1	34	(0)	645844
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
670	1.4	0.0	0.0	chr11	59550986	59551059	(75535563)	C	tRNA-Val-GTA	tRNA	(2)	74	1	656946
565	2.7	0.0	14.9	chr11	59551294	59551380	(75535242)	+	tRNA-Arg-AGA	tRNA	1	74	(2)	656947
2091	13.7	4.5	2.9	chr11	61153101	61153475	(73933147)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	659589
688	23.7	5.7	5.3	chr11	61153505	61153713	(73932909)	+	L1MEc	LINE/L1	34	243	(6157)	659590
24	13.4	4.1	0.0	chr11	61967443	61967491	(73119131)	+	(GGC)n	Simple_repeat	1	51	(0)	661187
12	31.2	1.9	0.0	chr11	62599540	62599591	(72487031)	+	A-rich	Low_complexity	1	53	(0)	662385
11	34.9	1.4	1.4	chr11	62601572	62601641	(72484981)	+	(CCGCCG)n	Simple_repeat	1	71	(0)	662388
13	22.1	2.7	0.0	chr11	62646561	62646597	(72440025)	+	(CCG)n	Simple_repeat	1	38	(0)	662469
527	22.2	7.7	5.3	chr11	62840723	62840874	(72245748)	C	AluY	SINE/Alu	(155)	156	1	662919
1365	9.9	0.0	6.1	chr11	62840903	62841036	(72245586)	+	AluSc8	SINE/Alu	1	130	(181)	662920
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	18.7	0.0	5.0	chr11	62855797	62855836	(72230786)	+	A-rich	Low_complexity	1	40	(0)	662962
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
276	32.8	3.8	3.8	chr11	64247887	64248019	(70838603)	+	L2a	LINE/L2	3246	3378	(48)	665250
15	28.9	5.5	1.3	chr11	64688364	64688436	(70398186)	+	GA-rich	Low_complexity	1	77	(0)	666044
18	25.2	4.8	2.3	chr11	64778514	64778620	(70308002)	+	(GCGGCGG)n	Simple_repeat	1	109	(0)	666183
15	19.1	1.9	5.6	chr11	64778569	64778621	(70308001)	+	G-rich	Low_complexity	1	54	(0)	666184
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
301	22.0	7.6	3.5	chr11	65261288	65261400	(69825222)	+	L2	LINE/L2	2391	2508	(911)	667197
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
296	35.0	7.0	1.7	chr11	65491438	65491614	(69595008)	C	L3	LINE/CR1	(2)	4097	3911	667650
29	0.0	0.0	0.0	chr11	65491794	65491818	(69594804)	+	(GT)n	Simple_repeat	1	25	(0)	667651
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
13	31.5	0.0	3.2	chr11	65961813	65961874	(69124748)	+	(GGC)n	Simple_repeat	1	62	(0)	668549
12	29.2	4.7	3.4	chr11	65961917	65962001	(69124621)	+	(GCGGAA)n	Simple_repeat	1	89	(0)	668550
17	14.2	1.9	7.3	chr11	66288893	66288946	(68797676)	+	(CGCGC)n	Simple_repeat	1	55	(0)	669184
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
19	31.7	4.5	0.9	chr11	66417688	66417798	(68668824)	+	(AGACAC)n	Simple_repeat	1	116	(0)	669476
30	6.0	0.0	0.0	chr11	66417986	66418020	(68668602)	+	(AC)n	Simple_repeat	1	35	(0)	669477
281	30.2	3.6	3.6	chr11	66510821	66510930	(68575692)	C	MIRc	SINE/MIR	(129)	139	30	669682
18	21.9	0.0	0.0	chr11	66843351	66843393	(68243229)	+	G-rich	Low_complexity	1	43	(0)	670370
407	22.6	3.5	3.2	chr11	67006621	67006762	(68079860)	+	MLT1O	LTR/ERVL-MaLR	57	186	(486)	670708
339	32.0	13.1	2.3	chr11	67054745	67054920	(68031702)	+	MIRc	SINE/MIR	7	204	(64)	670827
664	21.3	6.3	0.6	chr11	67054931	67055095	(68031527)	+	MIRb	SINE/MIR	1	175	(93)	670828
18	4.2	0.0	0.0	chr11	67119342	67119366	(67967256)	+	(CGG)n	Simple_repeat	1	25	(0)	671005
352	22.7	5.8	1.0	chr11	67469596	67469693	(67616929)	C	MIRb	SINE/MIR	(83)	185	83	671696
685	21.2	9.4	0.0	chr11	67508964	67509147	(67577475)	+	MIR	SINE/MIR	10	212	(50)	671764
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
13	8.2	3.9	0.0	chr11	68460278	68460303	(66626319)	+	(CCCCG)n	Simple_repeat	1	27	(0)	673467
132	20.5	2.4	0.3	chr11	68711163	68711459	(66375163)	+	(GT)n	Simple_repeat	1	304	(0)	673838
196	36.5	7.7	0.0	chr11	68904164	68904319	(66182303)	C	L3	LINE/CR1	(98)	4001	3833	674192
20	28.3	1.2	3.5	chr11	71929056	71929062	(63157560)	+	(GTGGAG)n	Simple_repeat	1	12	(75)	678991
15	22.5	0.0	2.3	chr11	71929063	71929105	(63157517)	+	(TGG)n	Simple_repeat	1	43	(0)	678992
20	28.3	1.2	3.5	chr11	71929106	71929141	(63157481)	+	(GTGGAG)n	Simple_repeat	13	87	(0)	678991
25	14.8	3.7	1.8	chr11	73377243	73377296	(61709326)	+	(GT)n	Simple_repeat	1	56	(0)	681727
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
17	24.0	3.3	1.6	chr11	73761468	73761528	(61325094)	+	G-rich	Low_complexity	1	63	(0)	682609
317	17.1	0.0	0.7	chr11	73761750	73761816	(61324806)	C	MIRc	SINE/MIR	(65)	165	99	682610
2668	5.2	0.0	0.0	chr11	73761832	73762140	(61324482)	+	AluSc	SINE/Alu	1	309	(0)	682611
14	27.2	3.1	3.0	chr11	74748917	74748981	(60337641)	+	(GCG)n	Simple_repeat	1	67	(0)	684742
18	18.1	0.0	0.0	chr11	74749032	74749069	(60337553)	+	(CGC)n	Simple_repeat	1	38	(0)	684743
13	17.4	0.0	2.9	chr11	75388988	75389021	(59697601)	+	A-rich	Low_complexity	1	34	(0)	685954
441	23.0	4.0	0.4	chr11	76152167	76152293	(58934329)	C	MIRc	SINE/MIR	(121)	147	11	687418
181	22.2	15.9	0.0	chr11	76152476	76152565	(58934057)	C	L2c	LINE/L2	(316)	3071	2965	687419
4298	12.6	1.0	6.8	chr11	77638005	77638557	(57448065)	+	LTR8	LTR/ERV1	1	528	(163)	690306
17	8.3	0.0	0.0	chr11	77820687	77820712	(57265910)	+	(CCG)n	Simple_repeat	1	26	(0)	690659
205	30.5	7.9	0.0	chr11	78188432	78188513	(56898109)	C	MIRc	SINE/MIR	(106)	162	74	691567
189	31.4	4.1	1.4	chr11	85648194	85648264	(49438358)	C	L3	LINE/CR1	(3833)	266	194	704148
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
329	33.8	4.2	0.7	chr11	86464679	86464815	(48621807)	C	MIRb	SINE/MIR	(53)	215	74	705597
297	27.5	9.8	0.0	chr11	86464815	86464934	(48621688)	C	MIR	SINE/MIR	(40)	222	90	705598
44	0.0	0.0	0.0	chr11	92380073	92380110	(42706512)	+	(GT)n	Simple_repeat	1	38	(0)	714072
1017	18.2	0.0	0.0	chr11	93285226	93285401	(41801221)	+	MLT2B2	LTR/ERVL	1	176	(339)	715382
240	18.5	5.3	0.0	chr11	93285658	93285711	(41800911)	+	MLT1N2	LTR/ERVL-MaLR	490	546	(16)	715383
2222	5.4	0.8	0.4	chr11	93921511	93921792	(41164830)	C	AluSc8	SINE/Alu	(0)	311	30	716411
1318	20.6	23.3	1.7	chr11	93921793	93922353	(41164269)	+	LTR50	LTR/ERVL	32	759	(36)	716410
7025	6.9	1.9	4.9	chr11	93946087	93948225	(41138397)	C	SVA_F	Retroposon/SVA	(0)	1375	57	716443
28	3.3	0.0	0.0	chr11	93948226	93948256	(41138366)	+	(GGGAGA)n	Simple_repeat	1	31	(0)	716444
475	30.5	4.0	7.4	chr11	93948317	93948574	(41138048)	C	MER103C	DNA/hAT-Charlie	(0)	297	49	716445
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
40	12.2	0.0	0.0	chr11	94741202	94741265	(40345357)	+	(GTGT)n	Simple_repeat	1	64	(0)	717601
33	21.4	0.0	0.0	chr11	94741266	94741272	(40345350)	+	(CGTGTG)n	Simple_repeat	2	72	(0)	717602
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
225	32.9	4.5	1.2	chr11	95398800	95398885	(39687737)	C	MIRb	SINE/MIR	(179)	89	1	718572
1405	25.3	8.2	5.5	chr11	95399180	95399781	(39686841)	C	L1MB7	LINE/L1	(9)	6175	5556	718573
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
1181	18.8	0.0	2.7	chr11	96235221	96235444	(38851178)	+	MER58A	DNA/hAT-Charlie	7	224	(0)	719843
2442	7.6	0.0	0.7	chr11	96464110	96464411	(38622211)	C	AluSq2	SINE/Alu	(13)	300	1	720155
14	23.3	0.0	2.4	chr11	111602500	111602541	(23484081)	+	(CCGC)n	Simple_repeat	1	42	(0)	741648
13	4.1	0.0	9.7	chr11	111766394	111766424	(23320198)	+	(CCCGC)n	Simple_repeat	1	31	(0)	741897
16	17.8	7.2	4.0	chr11	111871300	111871377	(23215245)	+	(CGCCG)n	Simple_repeat	1	80	(0)	742108
614	30.7	16.2	5.5	chr11	111879628	111880047	(23206575)	C	L2c	LINE/L2	(4)	3383	2910	742120
193	31.2	3.1	0.0	chr11	112280188	112280280	(22806342)	C	L3	LINE/CR1	(10)	4089	3994	742878
336	31.2	7.7	0.6	chr11	112280294	112280451	(22806171)	C	L3	LINE/CR1	(163)	3936	3767	742878
2245	28.5	2.2	0.0	chr11	113663193	113663684	(21422938)	+	FordPrefect	DNA/hAT-Tip100	100	602	(1081)	744948
4019	23.7	5.5	1.1	chr11	113663695	113664595	(21422027)	+	FordPrefect	DNA/hAT-Tip100	659	1601	(82)	744949
41	0.0	0.0	2.5	chr11	115317977	115318016	(19768606)	+	(AC)n	Simple_repeat	1	40	(0)	747473
1937	15.6	0.0	0.7	chr11	116854078	116854366	(18232256)	+	AluJo	SINE/Alu	1	287	(25)	750058
61	0.0	0.0	0.0	chr11	118240733	118240784	(16845838)	+	(AC)n	Simple_repeat	1	52	(0)	752547
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
17	19.5	5.1	6.0	chr11	118791133	118791211	(16295411)	+	(TCGC)n	Simple_repeat	1	83	(0)	753567
13	17.4	4.9	2.3	chr11	119168735	119168775	(15917847)	+	G-rich	Low_complexity	1	43	(0)	754377
2683	26.9	13.8	1.1	chr11	119479939	119481468	(15605154)	+	L2a	LINE/L2	1678	3424	(2)	754942
233	25.0	3.8	3.8	chr11	120077722	120077800	(15008822)	C	X7C_LINE	LINE/CR1	(86)	150	72	755937
48	0.0	0.0	0.0	chr11	120077802	120077842	(15008780)	+	(AC)n	Simple_repeat	1	41	(0)	755938
1981	12.0	0.0	3.4	chr11	120077853	120078144	(15008478)	C	AluSx	SINE/Alu	(30)	282	1	755939
71	20.8	0.0	0.7	chr11	120347119	120347265	(14739357)	+	(CTTT)n	Simple_repeat	1	147	(0)	756404
43	0.0	0.0	0.0	chr11	120347271	120347307	(14739315)	+	(TG)n	Simple_repeat	1	37	(0)	756405
24	25.7	4.4	3.4	chr11	122882875	122882987	(12203635)	+	(GGC)n	Simple_repeat	1	118	(0)	760399
18	17.5	3.6	3.5	chr11	123431170	123431224	(11655398)	+	(CGTCC)n	Simple_repeat	1	57	(0)	761531
1941	13.2	0.0	0.0	chr11	125568869	125569134	(9517488)	C	AluSg	SINE/Alu	(26)	284	19	764749
22	22.0	0.0	8.6	chr11	126063337	126063429	(9023193)	+	(GCCCC)n	Simple_repeat	1	93	(0)	765436
401	30.4	6.6	3.9	chr11	126585959	126586136	(8500486)	+	AmnSINE1	SINE/5S-Deu-L2	313	495	(80)	766326
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
224	23.2	1.6	0.9	chr12	1604758	1605303	(131670006)	+	(GT)n	Simple_repeat	1	555	(0)	780942
2290	8.2	0.0	3.0	chr12	1607673	1607975	(131667334)	C	AluSx	SINE/Alu	(18)	294	1	780947
594	27.2	11.3	1.2	chr12	1804562	1804814	(131470495)	+	MLT1J	LTR/ERVL-MaLR	28	309	(203)	781294
31	0.0	0.0	0.0	chr12	1924796	1924829	(131350480)	+	(GT)n	Simple_repeat	1	34	(0)	781437
50	2.2	0.0	0.0	chr12	1924830	1924876	(131350433)	+	(GA)n	Simple_repeat	1	47	(0)	781438
19	35.8	2.1	1.0	chr12	1972782	1972876	(131302433)	+	GA-rich	Low_complexity	1	97	(0)	781504
331	34.0	6.0	0.5	chr12	2034715	2034903	(131240406)	C	L2c	LINE/L2	(0)	3387	3188	781595
339	26.2	0.5	0.2	chr12	2437622	2438438	(130836871)	+	(TGG)n	Simple_repeat	1	821	(0)	782222
1564	10.6	17.5	0.0	chr12	2813042	2813286	(130462023)	C	AluSx1	SINE/Alu	(15)	297	1	782699
347	27.9	6.7	7.3	chr12	2877738	2877898	(130397411)	C	L2b	LINE/L2	(0)	3387	3225	782824
15	18.7	2.2	4.3	chr12	3491736	3491781	(129783528)	+	(CCG)n	Simple_repeat	1	47	(0)	783928
67	0.0	0.0	0.0	chr12	3491833	3491889	(129783420)	+	(TG)n	Simple_repeat	1	57	(0)	783929
17	0.0	0.0	0.0	chr12	4605186	4605206	(128670103)	+	(TTG)n	Simple_repeat	1	21	(0)	785779
1203	22.9	4.9	2.0	chr12	4605209	4605564	(128669745)	C	Charlie2b	DNA/hAT-Charlie	(28)	2754	2388	785780
22	13.0	0.0	0.0	chr12	5944969	5945002	(127330307)	+	(A)n	Simple_repeat	1	34	(0)	787770
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
12	16.3	2.8	2.7	chr12	6556140	6556175	(126719134)	+	G-rich	Low_complexity	1	37	(0)	788936
14	10.2	11.9	0.0	chr12	6700527	6700575	(126574734)	+	(GGAGGCGCA)n	Simple_repeat	1	54	(0)	789193
17	24.3	1.9	0.0	chr12	6778866	6778910	(126496399)	+	(CGCGCA)n	Simple_repeat	1	45	(0)	789365
31	3.3	0.0	0.0	chr12	6778911	6778941	(126496368)	+	(CA)n	Simple_repeat	1	31	(0)	789366
17	24.3	1.9	0.0	chr12	6778942	6778953	(126496356)	+	(CGCGCA)n	Simple_repeat	5	17	(0)	789367
192	29.1	0.4	0.6	chr12	6817645	6818185	(126457124)	+	(CA)n	Simple_repeat	1	543	(0)	789468
30	30.9	3.5	0.0	chr12	6828284	6828399	(126446910)	+	(TCTC)n	Simple_repeat	1	120	(0)	789481
21	12.9	4.5	2.2	chr12	6829271	6829314	(126445995)	+	(GT)n	Simple_repeat	1	46	(0)	789483
13	16.3	0.0	5.3	chr12	6852108	6852145	(126423164)	+	GA-rich	Low_complexity	1	38	(0)	789515
13	13.0	0.0	7.7	chr12	6867692	6867730	(126407579)	+	(GCCGG)n	Simple_repeat	1	39	(0)	789530
32	23.2	1.0	3.1	chr12	6914534	6914629	(126360680)	+	(CGC)n	Simple_repeat	1	97	(0)	789640
2235	8.2	2.0	0.0	chr12	6926475	6926768	(126348541)	C	AluSz	SINE/Alu	(12)	300	1	789656
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
184	25.8	12.6	5.8	chr12	6961488	6961590	(126313719)	+	MIRb	SINE/MIR	125	235	(33)	789702
619	26.0	0.0	5.2	chr12	6961639	6961792	(126313517)	C	MIR	SINE/MIR	(101)	161	16	789703
2408	8.4	0.0	0.6	chr12	6971265	6971575	(126303734)	C	AluSz	SINE/Alu	(3)	309	1	789707
424	23.7	18.7	0.5	chr12	9064134	9064279	(124211030)	+	MIR	SINE/MIR	3	174	(94)	793383
1537	20.4	7.8	0.9	chr12	9064280	9064729	(124210580)	+	MER52D	LTR/ERV1	5	488	(1635)	793384
3994	14.0	2.3	0.5	chr12	10360930	10361561	(122913748)	C	LTR9B	LTR/ERV1	(0)	644	1	795146
5370	15.6	3.4	1.1	chr12	10383887	10385358	(122889951)	+	L1MA5	LINE/L1	5683	7190	(529)	795172
39	2.7	0.0	0.0	chr12	10385359	10385396	(122889913)	+	(CA)n	Simple_repeat	1	38	(0)	795173
5282	13.5	5.0	1.9	chr12	10385397	10385908	(122889401)	+	L1MA5	LINE/L1	7191	7718	(1)	795172
2376	9.7	1.3	0.0	chr12	10674473	10674780	(122600529)	+	AluSx1	SINE/Alu	1	312	(0)	795512
325	28.6	12.8	0.8	chr12	11172231	11172470	(122102839)	+	HAL1ME	LINE/L1	1978	2250	(215)	796144
620	24.8	7.5	6.3	chr12	11172614	11172931	(122102378)	+	HAL1	LINE/L1	1912	2233	(274)	796145
2004	15.0	0.3	0.3	chr12	12333060	12333346	(120941963)	C	AluJb	SINE/Alu	(25)	287	1	797967
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
11	24.1	0.0	0.0	chr12	12725318	12725351	(120549958)	+	(CGCCCC)n	Simple_repeat	1	34	(0)	798634
24	24.3	0.0	0.0	chr12	12725359	12725409	(120549900)	+	(TG)n	Simple_repeat	1	51	(0)	798635
269	33.9	7.5	7.1	chr12	12901543	12901825	(120373484)	C	L2b	LINE/L2	(2)	3385	3106	799032
724	26.4	8.7	12.5	chr12	13361977	13362704	(119912605)	C	LTR41C	LTR/ERVL	(3)	698	1	799754
24	25.9	3.3	2.1	chr12	14365688	14365778	(118909531)	+	(GCG)n	Simple_repeat	1	94	(0)	801269
16	10.4	0.0	5.7	chr12	15882461	15882495	(117392814)	+	(CCCT)n	Simple_repeat	1	35	(0)	803443
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
33	6.5	2.0	2.0	chr12	24562449	24562498	(108712811)	+	(TG)n	Simple_repeat	1	51	(0)	815079
16	22.7	3.4	1.6	chr12	24562499	24562550	(108712759)	+	(TCGC)n	Simple_repeat	3	55	(0)	815080
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
19	23.4	5.6	3.2	chr12	25251107	25251196	(108024113)	+	G-rich	Low_complexity	1	95	(0)	816205
19	0.0	0.0	0.0	chr12	25276636	25276659	(107998650)	+	(AAC)n	Simple_repeat	1	24	(0)	816249
2140	15.9	1.8	1.0	chr12	25614724	25615110	(107660199)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	816727
241	39.5	10.8	0.9	chr12	25615203	25615427	(107659882)	+	L3b	LINE/CR1	4546	4795	(437)	816728
2397	4.9	0.4	2.8	chr12	27021862	27022149	(106253160)	+	AluY	SINE/Alu	1	281	(30)	818860
12	24.2	4.5	0.0	chr12	31362973	31363016	(101912293)	+	(TGCA)n	Simple_repeat	1	46	(0)	825107
11	15.9	6.5	4.1	chr12	31363055	31363100	(101912209)	+	(GGAGGT)n	Simple_repeat	1	49	(0)	825108
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
2339	12.5	0.3	0.0	chr12	32765735	32766045	(100509264)	C	AluSq2	SINE/Alu	(1)	312	1	828082
4351	14.7	4.9	5.5	chr12	32766046	32766536	(100508773)	C	L1PA17	LINE/L1	(637)	5529	5048	828081
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
6708	14.2	3.4	2.2	chr12	39033769	39034028	(94241281)	+	Tigger3b	DNA/TcMar-Tigger	965	1231	(0)	831851
348	15.5	1.7	0.0	chr12	39034049	39034106	(94241203)	+	MLT2F	LTR/ERVL	1	59	(604)	831853
413	13.1	12.5	2.3	chr12	39034154	39034239	(94241070)	+	MLT2F	LTR/ERVL	465	560	(3)	831853
894	33.7	5.3	0.7	chr12	39116860	39117286	(94158023)	C	LTR81	LTR/Gypsy	(512)	677	224	831982
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
43	7.7	0.0	0.0	chr12	41702327	41702381	(91572928)	+	(TG)n	Simple_repeat	1	55	(0)	835389
345	32.1	7.2	4.7	chr12	45415089	45415320	(87859989)	C	L1M5	LINE/L1	(1538)	4608	4371	840768
500	19.7	12.8	0.0	chr12	45415355	45415476	(87859833)	+	Charlie8	DNA/hAT-Charlie	119	258	(2170)	840769
293	40.5	2.3	1.7	chr12	45615361	45615536	(87659773)	C	L3b	LINE/CR1	(387)	4845	4669	841082
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
404	31.5	8.5	7.8	chr12	46558063	46558565	(86716744)	+	LTR85b	LTR/Gypsy?	226	732	(52)	842436
15	7.9	7.4	0.0	chr12	47820442	47820468	(85454841)	+	(AC)n	Simple_repeat	1	29	(0)	844248
2403	5.2	1.0	2.6	chr12	48717145	48717452	(84557857)	+	AluSx3	SINE/Alu	1	303	(8)	845624
13	14.6	0.0	5.9	chr12	48956305	48956338	(84318971)	+	(ACC)n	Simple_repeat	1	34	(0)	846156
1836	11.6	2.3	5.7	chr12	49322498	49322815	(83952494)	C	AluJo	SINE/Alu	(3)	309	3	846970
794	32.0	11.9	2.1	chr12	49627511	49627988	(83647321)	C	L2b	LINE/L2	(382)	3037	2507	847526
331	30.7	10.8	5.7	chr12	49945503	49945923	(83329386)	C	LTR85c	LTR/Gypsy?	(218)	605	161	848122
20	16.8	0.0	0.0	chr12	50057223	50057257	(83218052)	+	(GT)n	Simple_repeat	1	35	(0)	848345
20	22.6	2.1	0.0	chr12	50057355	50057401	(83217908)	+	(CA)n	Simple_repeat	1	48	(0)	848346
15	13.7	0.0	2.9	chr12	50057586	50057619	(83217690)	+	(CCCCT)n	Simple_repeat	1	34	(0)	848347
585	30.4	14.7	3.6	chr12	50614000	50614504	(82660805)	+	L2	LINE/L2	1803	2373	(1046)	849633
481	30.0	5.7	0.7	chr12	50614570	50614720	(82660589)	C	MIR3	SINE/MIR	(11)	197	39	849634
23	8.8	0.0	0.0	chr12	50764042	50764077	(82511232)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	849956
549	13.1	0.2	2.9	chr12	52156769	52156871	(81118438)	C	FLAM_C	SINE/Alu	(0)	133	32	852533
352	30.5	8.6	5.4	chr12	52175909	52176223	(81099086)	+	MamGypsy2-I	LTR/Gypsy	486	811	(3355)	852569
19	19.2	0.0	0.0	chr12	52203300	52203335	(81071974)	+	(TG)n	Simple_repeat	1	36	(0)	852620
1730	11.5	8.8	0.4	chr12	52980659	52980928	(80294381)	C	AluSz	SINE/Alu	(16)	296	2	853827
1583	15.2	0.0	8.8	chr12	53005392	53005720	(80269589)	+	AluJr	SINE/Alu	10	309	(3)	853907
2109	9.8	0.3	2.4	chr12	53005753	53006047	(80269262)	+	AluSq2	SINE/Alu	1	289	(24)	853908
1964	12.2	2.7	0.7	chr12	53046210	53046495	(80228814)	+	AluJb	SINE/Alu	1	292	(20)	853985
16	0.0	7.7	0.0	chr12	53252045	53252073	(80023236)	+	(GGGCG)n	Simple_repeat	1	31	(0)	854343
17	23.4	2.6	5.1	chr12	53252157	53252233	(80023076)	+	(GGAGCC)n	Simple_repeat	1	79	(0)	854344
2277	6.9	4.6	0.3	chr12	53440708	53440996	(79834313)	+	AluSc	SINE/Alu	1	302	(7)	854768
476	30.6	5.5	5.1	chr12	53440997	53441251	(79834058)	C	L2	LINE/L2	(673)	2746	2491	854769
656	20.7	7.5	9.3	chr12	53451383	53451712	(79823597)	C	L1MC5a	LINE/L1	(783)	1994	1696	854794
355	35.2	9.3	0.8	chr12	53727786	53728020	(79547289)	C	MIRc	SINE/MIR	(8)	260	4	855348
44	0.0	0.0	0.0	chr12	53767795	53767832	(79507477)	+	(GT)n	Simple_repeat	1	38	(0)	855418
2929	1.6	0.0	0.0	chr12	53767971	53768284	(79507025)	+	AluYb8	SINE/Alu	1	314	(4)	855419
1193	15.5	2.4	0.0	chr12	53807094	53807293	(79468016)	C	L1MB3	LINE/L1	(2)	6181	5977	855482
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
13	14.8	0.0	3.1	chr12	54161856	54161887	(79113422)	+	G-rich	Low_complexity	1	32	(0)	855963
2161	9.4	0.0	8.5	chr12	54288509	54288641	(78986668)	+	AluSx3	SINE/Alu	1	131	(180)	856177
1756	10.1	8.2	0.8	chr12	54288642	54288899	(78986410)	+	AluSx3	SINE/Alu	1	279	(32)	856178
581	25.4	8.0	2.6	chr12	54307512	54307701	(78967608)	+	MIRb	SINE/MIR	40	240	(28)	856213
2277	12.0	0.0	0.3	chr12	54422799	54423107	(78852202)	+	AluSg	SINE/Alu	1	308	(2)	856415
273	26.1	4.2	0.0	chr12	54656476	54656544	(78618765)	C	L2a	LINE/L2	(0)	3426	3355	856800
14	16.9	3.0	0.0	chr12	55927235	55927267	(77348042)	+	GA-rich	Low_complexity	1	34	(0)	858553
229	30.9	1.8	0.0	chr12	55972930	55972984	(77302325)	C	MIRc	SINE/MIR	(95)	173	118	858639
37	7.3	5.2	2.5	chr12	55973046	55973122	(77302187)	+	(CA)n	Simple_repeat	1	81	(0)	858640
30	26.7	4.2	0.0	chr12	55973123	55973210	(77302099)	+	(AC)n	Simple_repeat	1	92	(0)	858641
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
90	1.2	0.0	1.1	chr12	56116142	56116229	(77159080)	+	(AAAG)n	Simple_repeat	1	88	(0)	858936
13	23.1	0.0	0.0	chr12	56152593	56152628	(77122681)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	858986
34	0.0	0.0	2.9	chr12	56152690	56152723	(77122586)	+	(GT)n	Simple_repeat	1	34	(0)	858987
606	5.6	0.0	0.0	chr12	56190369	56190439	(77084870)	+	tRNA-Ser-TCG	tRNA	6	76	(9)	859050
2265	10.3	0.7	0.0	chr12	56190451	56190742	(77084567)	C	AluSx	SINE/Alu	(0)	312	19	859051
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
12	25.8	0.0	0.0	chr12	56300596	56300632	(76974677)	+	(TTCCCTT)n	Simple_repeat	1	37	(0)	859259
2113	9.5	4.1	0.0	chr12	56316550	56316832	(76958477)	C	AluSg7	SINE/Alu	(14)	295	1	859298
2230	11.3	0.0	1.3	chr12	56536923	56537223	(76738086)	C	AluSx1	SINE/Alu	(14)	298	2	859749
4455	13.4	5.7	5.1	chr12	56537224	56538017	(76737292)	C	L1MB2	LINE/L1	(50)	6121	5322	859748
40	4.9	0.0	0.0	chr12	57111277	57111319	(76163990)	+	(CA)n	Simple_repeat	1	43	(0)	860714
12	18.4	5.4	0.0	chr12	57111422	57111458	(76163851)	+	GA-rich	Low_complexity	1	39	(0)	860715
37	0.0	0.0	0.0	chr12	57112147	57112178	(76163131)	+	(AC)n	Simple_repeat	1	32	(0)	860716
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
194	28.0	2.6	10.7	chr12	57522175	57522258	(75753051)	+	MIR3	SINE/MIR	90	166	(42)	861462
11	34.6	2.9	0.0	chr12	57547085	57547153	(75728156)	+	G-rich	Low_complexity	1	71	(0)	861491
12	18.3	0.0	3.0	chr12	57754535	57754567	(75520742)	+	(CCTC)n	Simple_repeat	1	33	(0)	861784
449	30.7	9.5	4.0	chr12	57898328	57898554	(75376755)	+	MIRb	SINE/MIR	4	244	(24)	862008
18	29.1	0.0	0.0	chr12	57898646	57898700	(75376609)	+	(TTC)n	Simple_repeat	1	55	(0)	862009
34	8.6	0.0	0.0	chr12	59150046	59150095	(74125214)	+	(CCTT)n	Simple_repeat	1	50	(0)	863739
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
13	21.4	4.7	0.0	chr12	64404711	64404753	(68870556)	+	(CCGCT)n	Simple_repeat	1	45	(0)	871078
1657	21.2	4.8	10.3	chr12	64560707	64561190	(68714119)	C	LTR16B	LTR/ERVL	(3)	460	5	871350
465	28.3	2.9	4.9	chr12	64561350	64561557	(68713752)	C	MER20B	DNA/hAT-Charlie	(5)	214	1	871353
327	32.7	10.7	7.8	chr12	64810274	64810344	(68464965)	C	LTR85c	LTR/Gypsy?	(210)	613	537	871844
1989	11.9	4.7	0.0	chr12	64810345	64810630	(68464679)	+	AluSx1	SINE/Alu	11	310	(2)	871845
327	32.7	10.7	7.8	chr12	64810631	64810840	(68464469)	C	LTR85c	LTR/Gypsy?	(287)	536	323	871844
24	25.5	3.7	2.7	chr12	65824931	65824969	(67450340)	+	(CCTCCT)n	Simple_repeat	1	39	(0)	873414
27	3.4	0.0	0.0	chr12	65824970	65824999	(67450310)	+	(ACCTCC)n	Simple_repeat	1	30	(0)	873415
24	25.5	3.7	2.7	chr12	65825000	65825008	(67450301)	+	(CCTCCT)n	Simple_repeat	4	20	(52)	873416
13	23.3	0.0	0.0	chr12	65825009	65825043	(67450266)	+	(CCG)n	Simple_repeat	1	35	(0)	873417
24	25.5	3.7	2.7	chr12	65825044	65825067	(67450242)	+	(CCTCCT)n	Simple_repeat	21	72	(0)	873416
15	23.2	1.9	3.6	chr12	65825209	65825262	(67450047)	+	(GGC)n	Simple_repeat	1	55	(0)	873418
1996	10.4	4.5	6.6	chr12	66303348	66303665	(66971644)	+	AluSq2	SINE/Alu	3	313	(0)	874175
190	36.5	3.0	3.0	chr12	66319372	66319470	(66955839)	+	MIR	SINE/MIR	113	211	(51)	874207
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
1827	27.6	8.8	6.5	chr12	69354343	69355307	(63920002)	+	L2a	LINE/L2	1258	2246	(1173)	879119
34	7.0	0.0	0.0	chr12	76144372	76144416	(57130893)	+	(TGTG)n	Simple_repeat	1	45	(0)	888729
17	14.2	8.9	1.6	chr12	76764146	76764201	(56511108)	+	(GCTCGC)n	Simple_repeat	1	61	(0)	889814
27232	3.0	0.4	0.2	chr12	80144056	80150076	(53125233)	C	L1PA3	LINE/L1	(0)	6155	128	894598
6701	29.8	5.6	4.6	chr12	84502401	84508601	(48766708)	C	MER50-int	LTR/ERV1	(1870)	5886	97	900364
13	27.1	3.2	3.1	chr12	84508602	84508664	(48766645)	+	A-rich	Low_complexity	1	65	(0)	900365
411	25.0	4.0	0.8	chr12	84508671	84508791	(48766518)	C	MER50-int	LTR/ERV1	(7080)	125	1	900364
4169	18.0	1.7	4.5	chr12	84508794	84509596	(48765713)	C	MER50C	LTR/ERV1	(2)	780	1	900364
3085	10.7	2.4	2.0	chr12	84910505	84910928	(48364381)	+	LTR46	LTR/ERV1	1	415	(45)	900918
30	0.0	0.0	0.0	chr12	84910929	84910954	(48364355)	+	(GT)n	Simple_repeat	1	26	(0)	900919
3085	10.7	2.4	2.0	chr12	84910955	84910987	(48364322)	+	LTR46	LTR/ERV1	416	459	(1)	900918
705	35.5	1.4	0.0	chr12	88925871	88926163	(44349146)	+	L2a	LINE/L2	1816	2112	(1307)	906186
806	29.0	0.8	4.0	chr12	88926165	88926442	(44348867)	C	MLT1K	LTR/ERVL-MaLR	(14)	581	326	906187
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
16	0.0	0.0	0.0	chr12	91578990	91579006	(41696303)	+	(T)n	Simple_repeat	1	17	(0)	910130
44	4.1	2.0	0.0	chr12	91579157	91579206	(41696103)	+	(CA)n	Simple_repeat	1	51	(0)	910131
18	20.6	2.2	0.0	chr12	91579207	91579251	(41696058)	+	(CAC)n	Simple_repeat	1	46	(0)	910132
21	16.8	6.5	1.5	chr12	92145536	92145597	(41129712)	+	(GGC)n	Simple_repeat	1	66	(0)	911015
2323	7.5	1.3	2.3	chr12	93318213	93318518	(39956791)	+	AluSx1	SINE/Alu	2	304	(8)	913179
1225	15.6	4.9	12.2	chr12	93318519	93318567	(39956742)	C	MER33	DNA/hAT-Charlie	(275)	49	1	913177
13	24.7	1.8	3.5	chr12	93378425	93378480	(39896829)	+	G-rich	Low_complexity	1	57	(0)	913326
27	20.4	0.0	0.0	chr12	93378533	93378590	(39896719)	+	(CCCT)n	Simple_repeat	1	58	(0)	913327
12	15.8	0.0	3.3	chr12	93441908	93441937	(39833372)	+	(TCTCG)n	Simple_repeat	1	30	(0)	913432
14	15.9	0.0	0.0	chr12	93441980	93442007	(39833302)	+	(GCC)n	Simple_repeat	1	28	(0)	913433
34	3.0	0.0	0.0	chr12	93527015	93527048	(39748261)	+	(GT)n	Simple_repeat	1	34	(0)	913646
180	22.0	3.8	5.7	chr12	95003876	95003928	(38271381)	+	Penelope1_Vert	LINE/Penelope	880	931	(156)	916302
2192	11.0	0.3	0.7	chr12	95103545	95103835	(38171474)	C	AluSx	SINE/Alu	(22)	290	1	916509
19	24.7	0.0	0.0	chr12	95204692	95204732	(38070577)	+	(AC)n	Simple_repeat	1	41	(0)	916746
533	22.0	9.6	0.8	chr12	95204801	95204933	(38070376)	+	Tigger16a	DNA/TcMar-Tigger	811	956	(1)	916747
13	8.1	3.6	3.5	chr12	95474285	95474312	(37800997)	+	GA-rich	Low_complexity	1	29	(0)	917299
15	17.6	6.7	0.0	chr12	95859079	95859123	(37416186)	+	GA-rich	Low_complexity	1	48	(0)	918026
645	1.3	0.0	0.0	chr12	96036021	96036095	(37239214)	+	tRNA-Asp-GAY	tRNA	1	75	(0)	918300
649	2.8	0.0	0.0	chr12	98503503	98503574	(34771735)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	922374
2593	7.4	0.0	0.3	chr12	98516799	98517110	(34758199)	C	AluSp	SINE/Alu	(2)	311	1	922402
13	26.2	0.0	2.3	chr12	100142485	100142527	(33132782)	+	(CGC)n	Simple_repeat	1	43	(0)	924964
12	21.6	0.0	0.0	chr12	100142765	100142796	(33132513)	+	(CCACGG)n	Simple_repeat	1	32	(0)	924965
394	16.2	2.2	1.1	chr12	103905216	103905982	(29369327)	+	GA-rich	Low_complexity	1	784	(0)	931503
2455	18.8	10.4	0.4	chr12	103925325	103925810	(29349499)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	931549
2354	8.6	0.0	0.3	chr12	103927967	103928267	(29347042)	C	AluSq	SINE/Alu	(13)	300	1	931557
19	26.1	5.4	0.0	chr12	104064727	104064800	(29210509)	+	(GGC)n	Simple_repeat	1	78	(0)	931798
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
195	26.1	15.6	3.0	chr12	104219410	104219476	(29055833)	C	L2b	LINE/L2	(23)	3352	3276	932110
1350	22.5	4.0	5.0	chr12	104442907	104443528	(28831781)	+	MLT1D	LTR/ERVL-MaLR	11	627	(0)	932586
1941	16.9	0.7	0.0	chr12	104942197	104942491	(28332818)	+	AluJb	SINE/Alu	1	297	(15)	933542
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
179	28.9	0.6	0.2	chr12	105496840	105497331	(27777978)	+	(GTGGTG)n	Simple_repeat	1	495	(0)	934498
38	0.0	0.0	0.0	chr12	106075287	106075319	(27199990)	+	(AC)n	Simple_repeat	1	33	(0)	935560
497	27.9	0.0	1.3	chr12	106075436	106075591	(27199718)	+	MIR	SINE/MIR	99	252	(10)	935561
498	12.0	13.2	0.0	chr12	106362901	106362992	(26912317)	C	L1ME2	LINE/L1	(120)	6044	5939	936123
1122	25.0	6.7	3.1	chr12	106363020	106363407	(26911902)	+	L2	LINE/L2	2146	2548	(871)	936124
23	28.5	1.3	0.0	chr12	106774607	106774682	(26500627)	+	GA-rich	Low_complexity	1	77	(0)	936818
275	32.3	0.3	2.4	chr12	107462466	107463388	(25811921)	+	(ATG)n	Simple_repeat	1	926	(0)	938200
340	21.9	0.7	0.4	chr12	107528773	107529497	(25745812)	+	(TGATGA)n	Simple_repeat	1	730	(0)	938356
3923	12.6	2.5	2.6	chr12	108090365	108091009	(25184300)	C	LTR9B	LTR/ERV1	(0)	644	1	939427
306	32.9	0.0	0.5	chr12	108578496	108579241	(24696068)	+	(CACCAC)n	Simple_repeat	5	746	(0)	940568
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
536	24.4	12.1	1.3	chr12	109288352	109288505	(23986804)	+	MIRb	SINE/MIR	80	252	(16)	942203
348	32.7	15.8	3.4	chr12	109288815	109289023	(23986286)	+	L2b	LINE/L2	3114	3353	(22)	942204
1098	19.8	0.3	0.0	chr12	109634192	109636271	(23639038)	+	(CAC)n	Simple_repeat	1	2086	(0)	942926
1278	14.3	1.8	0.5	chr12	109899799	109900015	(23375294)	C	AluJr	SINE/Alu	(12)	300	81	943608
211	16.2	0.0	0.0	chr12	109900017	109900053	(23375256)	C	MER5B	DNA/hAT-Charlie	(141)	37	1	943607
12	5.6	0.0	0.0	chr12	109996273	109996291	(23279018)	+	(GGC)n	Simple_repeat	1	19	(0)	943774
307	33.0	5.1	3.3	chr12	110267279	110267488	(23007821)	+	AmnSINE1	SINE/5S-Deu-L2	265	478	(97)	944384
16	16.0	2.2	4.3	chr12	110281725	110281770	(22993539)	+	(GAGGC)n	Simple_repeat	1	47	(0)	944415
2325	9.3	0.3	1.3	chr12	110469496	110469808	(22805501)	C	AluSx1	SINE/Alu	(2)	310	1	944813
11	24.4	4.0	1.9	chr12	110502042	110502091	(22773218)	+	(CCGTCA)n	Simple_repeat	1	52	(0)	944882
16	20.3	0.0	0.0	chr12	110742795	110742829	(22532480)	+	(GGC)n	Simple_repeat	1	35	(0)	945398
520	24.5	1.5	1.1	chr12	110826615	110826761	(22448548)	+	MIRb	SINE/MIR	42	190	(18)	945652
348	24.7	10.5	0.1	chr12	110826912	110827032	(22448277)	C	MIRb	SINE/MIR	(128)	140	2	945646
18	4.5	0.0	0.0	chr12	111035956	111035978	(22239331)	+	(AG)n	Simple_repeat	1	23	(0)	946179
267	20.0	5.0	0.0	chr12	111686339	111686414	(21588895)	C	MIR1_Amn	SINE/MIR	(80)	150	62	947658
2219	9.4	1.3	0.3	chr12	111686437	111686733	(21588576)	+	AluSq	SINE/Alu	1	300	(13)	947659
251	31.1	10.9	0.0	chr12	111686798	111686887	(21588422)	C	L2b	LINE/L2	(6)	3369	3269	947660
282	28.6	0.7	18.8	chr12	111942572	111942664	(21332645)	C	MIR3	SINE/MIR	(60)	148	58	948180
40	8.1	0.0	0.0	chr12	111942763	111942814	(21332495)	+	(TG)n	Simple_repeat	1	52	(0)	948183
1434	15.8	12.6	1.1	chr12	111942964	111943223	(21332086)	C	AluJb	SINE/Alu	(18)	294	1	948184
36	0.0	0.0	0.0	chr12	112382328	112382360	(20892949)	+	(GCC)n	Simple_repeat	1	33	(0)	949065
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
51	22.5	1.5	0.8	chr12	115000485	115000578	(18274731)	+	GA-rich	Low_complexity	1	94	(0)	955056
1719	13.1	12.4	0.0	chr12	115000579	115000846	(18274463)	+	AluSx	SINE/Alu	1	306	(6)	955057
216	23.1	3.0	0.2	chr12	115177779	115178320	(18096989)	+	(CATCAC)n	Simple_repeat	1	558	(0)	955464
852	25.7	15.0	1.6	chr12	116257334	116257638	(17017671)	+	MLT1J	LTR/ERVL-MaLR	83	435	(77)	957595
203	34.9	1.2	0.5	chr12	116414988	116415809	(16859500)	+	(GT)n	Simple_repeat	1	832	(0)	957984
230	28.4	0.0	0.0	chr12	116493008	116493074	(16782235)	+	MLT1M	LTR/ERVL-MaLR	370	436	(236)	958199
917	15.4	1.5	0.0	chr12	116493176	116493305	(16782004)	+	AluJr4	SINE/Alu	1	132	(180)	958200
1752	16.5	5.6	1.4	chr12	116532278	116532568	(16742741)	+	AluJr	SINE/Alu	6	309	(3)	958304
295	20.6	0.0	3.2	chr12	116532569	116532581	(16742728)	+	AluJo	SINE/Alu	144	204	(108)	958305
228	27.7	5.9	3.5	chr12	116532619	116532734	(16742575)	C	L2a	LINE/L2	(618)	2801	2683	958297
300	34.9	9.1	4.3	chr12	116532875	116533049	(16742260)	+	MIRb	SINE/MIR	2	185	(83)	958306
172	15.9	4.9	4.2	chr12	116737305	116737777	(16537532)	+	GA-rich	Low_complexity	1	496	(0)	958800
495	23.9	12.4	4.7	chr12	116910536	116910750	(16364559)	+	L2a	LINE/L2	3192	3425	(1)	959264
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
447	20.4	21.0	0.0	chr12	116916738	116916884	(16358425)	C	MLT1H	LTR/ERVL-MaLR	(29)	520	335	959286
23	3.7	0.0	0.0	chr12	116916885	116916912	(16358397)	+	(TG)n	Simple_repeat	1	28	(0)	959287
17	5.0	0.0	0.0	chr12	116916912	116916932	(16358377)	+	(GA)n	Simple_repeat	1	21	(0)	959288
405	25.0	14.0	5.3	chr12	116917011	116917179	(16358130)	C	MLT1H	LTR/ERVL-MaLR	(303)	186	1	959286
16	33.1	1.4	1.3	chr12	117190381	117190454	(16084855)	+	(CCG)n	Simple_repeat	1	75	(0)	959740
15	20.1	2.9	0.0	chr12	117190477	117190510	(16084799)	+	(CG)n	Simple_repeat	1	35	(0)	959741
114	6.0	1.8	1.8	chr12	117194726	117194889	(16080420)	+	(CTTT)n	Simple_repeat	1	167	(0)	959761
2310	8.3	0.3	0.3	chr12	117194894	117195182	(16080127)	C	AluSp	SINE/Alu	(24)	289	1	959762
60	3.2	0.0	0.0	chr12	117243529	117243591	(16031718)	+	(CCAT)n	Simple_repeat	1	63	(0)	959883
120	23.7	0.0	0.0	chr12	117243655	117243920	(16031389)	+	(TCCA)n	Simple_repeat	1	266	(0)	959884
33	16.5	1.1	6.5	chr12	117968829	117968920	(15306389)	+	(TGC)n	Simple_repeat	1	93	(0)	961512
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
30	19.5	2.8	1.4	chr12	117969563	117969652	(15305657)	+	(GT)n	Simple_repeat	1	91	(0)	961516
14	23.7	4.0	5.1	chr12	118016895	118016907	(15258402)	+	(AGGCGG)n	Simple_repeat	1	76	(0)	961646
13	23.5	3.3	4.8	chr12	118016908	118016967	(15258342)	+	(GCG)n	Simple_repeat	1	62	(0)	961647
2497	5.5	0.0	1.3	chr12	120201476	120201783	(13073526)	C	AluY	SINE/Alu	(7)	304	1	966430
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
2122	7.6	2.7	1.0	chr12	120292321	120292608	(12982701)	+	AluSg4	SINE/Alu	1	293	(17)	966632
369	16.9	0.7	0.0	chr12	120388875	120388959	(12886350)	+	MIRc	SINE/MIR	73	159	(103)	966905
2053	12.4	0.3	0.0	chr12	120530301	120530583	(12744726)	+	AluSx	SINE/Alu	1	284	(28)	967311
38	0.0	0.0	0.0	chr12	120530584	120530618	(12744691)	+	(AAAT)n	Simple_repeat	1	35	(0)	967312
756	28.0	1.4	1.8	chr12	120653266	120653487	(12621822)	C	MIRb	SINE/MIR	(13)	255	35	967604
34	15.7	5.1	0.0	chr12	120710346	120710423	(12564886)	+	(CCGCCC)n	Simple_repeat	1	82	(0)	967731
13	30.7	0.0	0.0	chr12	120710495	120710542	(12564767)	+	G-rich	Low_complexity	1	48	(0)	967732
296	23.5	13.4	0.0	chr12	121016663	121016787	(12258522)	C	MIR3	SINE/MIR	(23)	185	40	968381
375	23.0	28.2	2.8	chr12	121664113	121664293	(11611016)	+	MLT1K	LTR/ERVL-MaLR	368	594	(1)	969981
223	21.1	30.0	0.0	chr12	121664348	121664465	(11610844)	C	L2b	LINE/L2	(199)	3188	3024	969982
1586	8.8	2.9	0.0	chr12	121664478	121664682	(11610627)	+	AluSx1	SINE/Alu	2	212	(100)	969983
2297	7.3	0.0	1.3	chr12	121687362	121687662	(11587647)	+	AluSq2	SINE/Alu	2	298	(15)	970062
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
50	5.6	0.0	0.0	chr12	122021917	122021972	(11253337)	+	(TG)n	Simple_repeat	1	56	(0)	970922
1136	26.4	7.7	1.0	chr12	122064182	122064568	(11210741)	+	MLT1K	LTR/ERVL-MaLR	145	559	(36)	971015
1005	15.9	6.1	1.2	chr12	122092897	122095314	(11179995)	+	(GT)n	Simple_repeat	1	2566	(0)	971084
1625	14.5	4.7	0.0	chr12	122368661	122368901	(10906408)	+	AluSz	SINE/Alu	1	253	(59)	971635
18	18.8	6.5	1.5	chr12	122500541	122500611	(10774698)	+	(CGCCCT)n	Simple_repeat	1	74	(0)	972003
14	12.5	0.0	0.0	chr12	122500719	122500744	(10774565)	+	(TCG)n	Simple_repeat	1	26	(0)	972004
707	29.6	10.4	7.1	chr12	122527565	122528159	(10747150)	+	L2a	LINE/L2	2770	3426	(0)	972055
300	31.0	18.0	1.2	chr12	122740506	122740675	(10534634)	+	L2a	LINE/L2	2722	2926	(493)	972573
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
19	13.3	2.3	2.3	chr12	122966098	122966140	(10309169)	+	(GCTGCGG)n	Simple_repeat	1	44	(0)	973066
572	25.8	0.7	1.2	chr12	122974375	122974556	(10300753)	+	MIR	SINE/MIR	29	204	(26)	973092
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
29	0.0	3.2	0.0	chr12	123584561	123584591	(9690718)	+	(GCG)n	Simple_repeat	1	32	(0)	974479
645	17.0	1.6	0.4	chr12	124092486	124093690	(9181619)	+	(TGATGA)n	Simple_repeat	1	1224	(0)	975449
15	4.3	4.2	0.0	chr12	124528125	124528148	(8747161)	+	(ACC)n	Simple_repeat	1	25	(0)	976217
26	0.0	0.0	5.9	chr12	124863979	124864012	(8411297)	+	(CGGGG)n	Simple_repeat	1	34	(0)	976997
20	28.9	4.9	3.1	chr12	124864161	124864282	(8411027)	+	(CCTCCT)n	Simple_repeat	1	128	(0)	976998
1145	18.2	2.3	5.3	chr12	124916858	124917083	(8358226)	+	MER20	DNA/hAT-Charlie	1	219	(0)	977141
1847	26.9	9.9	1.3	chr12	124992683	124993439	(8281870)	C	L1MC5a	LINE/L1	(325)	2452	1624	977331
16	9.9	0.0	5.6	chr12	125049863	125049898	(8225411)	+	G-rich	Low_complexity	1	36	(0)	977468
17	8.7	0.0	7.0	chr12	125050059	125050070	(8225239)	+	(AATAATT)n	Simple_repeat	1	11	(0)	977469
2431	6.7	0.3	0.3	chr12	125050071	125050369	(8224940)	+	AluSc	SINE/Alu	1	299	(10)	977470
585	13.5	5.1	0.4	chr12	125677856	125678999	(7596310)	+	(ATG)n	Simple_repeat	1	1202	(0)	978556
581	34.4	3.2	1.6	chr12	130583125	130583369	(2691940)	+	MIR	SINE/MIR	13	261	(1)	986888
20	21.7	0.0	3.5	chr12	130716504	130716560	(2558749)	+	G-rich	Low_complexity	1	57	(0)	987101
28	21.6	0.0	0.0	chr12	130716611	130716666	(2558643)	+	(AC)n	Simple_repeat	1	56	(0)	987102
108	24.9	1.1	0.4	chr12	130766548	130766812	(2508497)	+	(TCACCA)n	Simple_repeat	1	268	(0)	987174
23	20.7	2.4	5.9	chr12	130766878	130766994	(2508315)	+	G-rich	Low_complexity	1	112	(0)	987175
2281	9.8	0.0	0.3	chr12	131955650	131955945	(1319364)	C	AluSx	SINE/Alu	(17)	295	1	988897
329	30.0	4.5	2.3	chr12	131955957	131956130	(1319179)	C	L1ME1	LINE/L1	(77)	6102	5925	988898
259	29.8	1.7	0.0	chr12	131956153	131956266	(1319043)	C	L1ME1	LINE/L1	(557)	5887	5772	988898
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
292	18.9	4.1	0.7	chr12	132349442	132350119	(925190)	+	(CACCAT)n	Simple_repeat	1	706	(0)	989362
208	15.8	3.0	3.9	chr12	132597406	132597907	(677402)	+	(CTGTCT)n	Simple_repeat	1	517	(0)	989641
13	28.4	3.3	1.6	chr12	132687508	132687568	(587741)	+	(GGCGC)n	Simple_repeat	1	63	(0)	989772
14	22.0	2.4	0.0	chr12	132687578	132687619	(587690)	+	(GCGCTCC)n	Simple_repeat	1	43	(0)	989773
450	32.3	0.7	2.1	chr12	132950321	132951996	(323313)	+	(CA)n	Simple_repeat	1	1688	(0)	990224
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
931	12.4	1.5	0.0	chr13	21017344	21017472	(93346856)	C	AluJr4	SINE/Alu	(179)	133	3	995318
13	11.8	7.7	2.4	chr13	21458926	21458964	(92905364)	+	(GCGTCCG)n	Simple_repeat	1	42	(0)	996140
24	30.0	1.8	2.6	chr13	21459329	21459439	(92904889)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	996141
22105	9.8	3.1	2.3	chr13	24834450	24840892	(89523436)	+	L1PB1	LINE/L1	378	6864	(3)	1000873
1387	11.8	15.7	0.4	chr13	26222671	26222908	(88141420)	C	AluJr	SINE/Alu	(27)	285	5	1002920
6108	8.8	2.5	1.8	chr13	27125487	27126431	(87237897)	+	L1P2	LINE/L1	5	956	(5228)	1004359
123	1.4	3.4	2.0	chr13	28412290	28412436	(85951892)	+	(TCTT)n	Simple_repeat	1	152	(0)	1006708
18	7.8	0.0	0.0	chr13	29850579	29850605	(84513723)	+	(GGC)n	Simple_repeat	1	27	(0)	1008715
18	27.4	1.3	4.0	chr13	30464650	30464724	(83899604)	+	(CCG)n	Simple_repeat	1	76	(0)	1009735
31	0.0	0.0	0.0	chr13	30464762	30464788	(83899540)	+	(TG)n	Simple_repeat	1	27	(0)	1009736
18	22.8	3.6	0.0	chr13	30464807	30464814	(83899514)	+	(GCGCGG)n	Simple_repeat	1	23	(35)	1009737
14	13.2	0.0	7.7	chr13	30464815	30464853	(83899475)	+	(GCG)n	Simple_repeat	1	39	(0)	1009738
18	22.8	3.6	0.0	chr13	30464854	30464862	(83899466)	+	(GCGCGG)n	Simple_repeat	24	58	(0)	1009737
370	23.4	10.3	9.1	chr13	30674562	30674782	(83689546)	C	MER106A	DNA/hAT-Charlie	(11)	225	2	1010175
32	5.3	0.0	0.0	chr13	34942512	34942550	(79421778)	+	(GCAGCG)n	Simple_repeat	1	39	(0)	1016528
12	31.3	0.0	0.0	chr13	51452554	51452600	(62911728)	+	(GGAGGT)n	Simple_repeat	1	47	(0)	1041601
13	6.5	12.1	0.0	chr13	51452737	51452769	(62911559)	+	(CCTG)n	Simple_repeat	1	37	(0)	1041602
17016	12.4	2.2	2.6	chr13	57784177	57788027	(56576301)	C	L1PA10	LINE/L1	(2629)	3832	10	1049979
4285	20.3	0.7	2.2	chr13	64074922	64075752	(50288576)	C	MER52A	LTR/ERV1	(0)	1755	937	1058100
1093	24.4	2.5	6.3	chr13	64075760	64076092	(50288236)	C	MER52A	LTR/ERV1	(1435)	320	1	1058100
20	16.2	0.0	2.3	chr13	75549747	75549789	(38814539)	+	(GGC)n	Simple_repeat	1	43	(0)	1073544
13	12.8	2.7	2.6	chr13	98050646	98050656	(16313672)	+	(TTGTT)n	Simple_repeat	1	10	(0)	1103966
2098	10.6	0.0	1.1	chr13	98050657	98050938	(16313390)	C	AluSx	SINE/Alu	(33)	279	1	1103967
12	23.4	4.6	4.4	chr13	100089149	100089213	(14275115)	+	(CGCTGG)n	Simple_repeat	1	68	(0)	1107378
3341	7.5	0.8	13.0	chr13	110965260	110965842	(3398486)	+	LTR10F	LTR/ERV1	1	511	(0)	1121994
424	20.6	4.5	13.0	chr13	112968142	112968264	(1396064)	C	BC200	scRNA	(79)	121	10	1124104
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
16	14.0	7.5	0.0	chr14	20343644	20343683	(86700035)	+	(GGC)n	Simple_repeat	1	43	(0)	1127888
3373	14.2	10.0	0.7	chr14	20624328	20624560	(86419158)	+	L1P1	LINE/L1	4314	4569	(1577)	1128363
41	23.3	6.2	0.0	chr14	20624562	20624690	(86419028)	+	GA-rich	Low_complexity	1	137	(0)	1128365
4354	11.5	1.1	0.5	chr14	21308566	21309205	(85734513)	C	LTR9B	LTR/ERV1	(0)	644	1	1129498
21	16.1	0.0	0.0	chr14	21384077	21384117	(85659601)	+	(T)n	Simple_repeat	1	41	(0)	1129660
395	12.8	1.3	9.3	chr14	22737227	22737312	(84306406)	+	LTR8B	LTR/ERV1	1	79	(741)	1131601
3613	14.2	12.1	5.4	chr14	22737328	22737671	(84306047)	+	LTR8B	LTR/ERV1	44	410	(410)	1131601
17	13.8	5.0	0.0	chr14	22886947	22886986	(84156732)	+	(CCGCC)n	Simple_repeat	1	42	(0)	1131899
13	19.7	4.0	3.9	chr14	22983129	22983178	(84060540)	+	GA-rich	Low_complexity	1	52	(0)	1132085
2228	9.4	2.3	0.0	chr14	23294820	23295116	(83748602)	+	AluSx	SINE/Alu	1	304	(8)	1132649
294	26.4	7.8	3.6	chr14	23469077	23469186	(83574532)	C	MIR3	SINE/MIR	(49)	159	45	1132899
17	19.0	1.6	6.5	chr14	24369166	24369226	(82674492)	+	(CCCCAG)n	Simple_repeat	1	62	(0)	1134159
14	0.0	0.0	0.0	chr14	36320608	36320625	(70723093)	+	(CCA)n	Simple_repeat	1	18	(0)	1151418
2305	7.9	1.0	0.0	chr14	39174459	39174749	(67868969)	+	AluSx	SINE/Alu	1	294	(18)	1155291
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
2306	5.4	0.0	1.1	chr14	49635354	49635631	(57408087)	+	AluYm1	SINE/Alu	1	275	(36)	1168310
2332	7.0	0.7	0.0	chr14	49687713	49687997	(57355721)	C	AluSc	SINE/Alu	(22)	287	1	1168415
16	0.0	0.0	0.0	chr14	50062571	50062588	(56981130)	+	(TC)n	Simple_repeat	1	18	(0)	1169193
14	29.8	0.0	3.3	chr14	50944096	50944156	(56099562)	+	(CCCGGC)n	Simple_repeat	1	61	(0)	1170724
984	23.4	13.7	2.0	chr14	51092781	51093237	(55950481)	C	L2a	LINE/L2	(126)	3300	2774	1170950
959	26.3	10.4	3.6	chr14	51123361	51123699	(55920019)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	190	1171002
44	0.0	0.0	0.0	chr14	51123700	51123737	(55919981)	+	(GT)n	Simple_repeat	1	38	(0)	1171003
959	26.3	10.4	3.6	chr14	51123738	51123808	(55919910)	C	MLT1H	LTR/ERVL-MaLR	(360)	189	108	1171002
1511	23.6	5.5	4.2	chr14	51342357	51342897	(55700821)	+	MLT1E1A	LTR/ERVL-MaLR	5	680	(0)	1171335
337	31.0	4.9	0.0	chr14	51581307	51581422	(55462296)	C	L2c	LINE/L2	(0)	3387	3266	1171685
682	26.5	7.4	2.1	chr14	52457868	52458110	(54585608)	+	Charlie29a	DNA/hAT-Charlie	182	438	(281)	1172967
306	24.7	1.4	0.0	chr14	52458121	52458193	(54585525)	+	Charlie29a	DNA/hAT-Charlie	646	719	(0)	1172968
2093	10.9	4.1	0.0	chr14	52458277	52458560	(54585158)	+	AluSz	SINE/Alu	1	296	(16)	1172969
6941	10.8	5.6	3.1	chr14	52589671	52590810	(54452908)	+	Tigger3b	DNA/TcMar-Tigger	1	1171	(60)	1173163
907	25.1	10.8	9.3	chr14	54356175	54356711	(52687007)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	3	1175811
492	14.0	2.8	0.5	chr14	54396310	54396412	(52647306)	+	FLAM_C	SINE/Alu	22	127	(6)	1175875
1888	6.3	0.9	0.0	chr14	54396425	54396645	(52647073)	+	AluSp	SINE/Alu	77	299	(14)	1175876
25990	5.0	0.7	0.8	chr14	54870365	54876505	(52167213)	+	L1PA4	LINE/L1	1	6155	(0)	1176584
1738	7.8	0.0	5.0	chr14	55599464	55599721	(51443997)	C	AluSx1	SINE/Alu	(11)	301	57	1178001
1773	11.9	12.5	0.4	chr14	56735188	56735448	(50308270)	C	AluSz	SINE/Alu	(14)	298	2	1179658
15	13.5	2.8	5.4	chr14	56735449	56735467	(50308251)	+	(TC)n	Simple_repeat	1	19	(0)	1179659
446	32.1	4.6	3.6	chr14	56735597	56735790	(50307928)	+	MIRb	SINE/MIR	35	230	(38)	1179660
13	15.1	5.1	2.4	chr14	57268730	57268768	(49774950)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1180525
13	24.4	0.0	4.3	chr14	57391075	57391121	(49652597)	+	GA-rich	Low_complexity	1	47	(0)	1180688
13	16.4	0.0	10.0	chr14	57391105	57391154	(49652564)	+	(GGC)n	Simple_repeat	1	50	(0)	1180689
13	13.2	0.0	0.0	chr14	57391183	57391207	(49652511)	+	(CAG)n	Simple_repeat	1	25	(0)	1180690
13	27.9	0.0	0.0	chr14	58298863	58298905	(48744813)	+	(CAGCCG)n	Simple_repeat	1	43	(0)	1182004
4173	12.8	7.8	1.3	chr14	59086159	59087031	(47956687)	+	L1PA16	LINE/L1	5221	6150	(16)	1183241
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
20	24.3	2.6	2.6	chr14	60649205	60649280	(46394438)	+	G-rich	Low_complexity	1	78	(0)	1185329
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
60	31.9	3.9	1.4	chr14	61595569	61595853	(45447865)	+	(CA)n	Simple_repeat	1	296	(0)	1186743
2475	8.5	0.0	0.3	chr14	61595935	61596241	(45447477)	C	AluSx1	SINE/Alu	(6)	306	1	1186744
262	31.7	0.0	7.3	chr14	61625156	61625291	(45418427)	+	L2c	LINE/L2	1922	2047	(1372)	1186796
584	29.1	10.7	4.6	chr14	61625349	61625805	(45417913)	+	MLT1L	LTR/ERVL-MaLR	121	608	(2)	1186797
13	24.5	4.2	0.0	chr14	63727615	63727662	(43316056)	+	(GCGGC)n	Simple_repeat	1	50	(0)	1189891
15	18.6	0.0	8.6	chr14	66508442	66508499	(40535219)	+	(CTCCCGG)n	Simple_repeat	1	58	(0)	1194714
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
1433	13.1	11.8	14.8	chr14	67863797	67864234	(39179484)	C	MSTA	LTR/ERVL-MaLR	(0)	428	6	1196847
25	18.6	9.2	2.5	chr14	70600745	70600853	(36442865)	+	(GAGCGG)n	Simple_repeat	1	119	(0)	1201387
663	15.4	0.0	13.4	chr14	72962348	72962496	(34081222)	+	AluJo	SINE/Alu	1	129	(183)	1205165
16	12.6	0.0	0.0	chr14	72962497	72962521	(34081197)	+	(CA)n	Simple_repeat	1	25	(0)	1205166
1964	8.0	5.1	1.5	chr14	72962522	72962784	(34080934)	C	AluSx1	SINE/Alu	(39)	273	1	1205167
2356	8.5	0.0	1.4	chr14	73311072	73311353	(33732365)	C	AluSg4	SINE/Alu	(32)	278	1	1205939
17	5.0	0.0	0.0	chr14	73461267	73461287	(33582431)	+	(A)n	Simple_repeat	1	21	(0)	1206323
3849	28.2	1.6	1.1	chr14	73712619	73713668	(33330050)	C	MamGyp-int	LTR/Gypsy	(3972)	1131	76	1206930
882	27.2	14.5	8.4	chr14	74301928	74302614	(32741104)	+	L1ME5	LINE/L1	5419	6187	(7)	1208197
40	2.6	0.0	0.0	chr14	74572285	74572323	(32471395)	+	(GT)n	Simple_repeat	1	39	(0)	1208757
16	0.0	0.0	0.0	chr14	74572324	74572341	(32471377)	+	(AG)n	Simple_repeat	1	18	(0)	1208758
18	12.6	0.0	0.0	chr14	74572744	74572770	(32470948)	+	(CA)n	Simple_repeat	1	27	(0)	1208759
59	0.0	0.0	0.0	chr14	75869014	75869063	(31174655)	+	(GT)n	Simple_repeat	1	50	(0)	1211217
12	22.4	0.0	2.6	chr14	75869110	75869147	(31174571)	+	(TTGT)n	Simple_repeat	1	38	(0)	1211218
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
2218	11.7	6.0	1.1	chr14	77409205	77409566	(29634152)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1214148
14	9.3	0.0	0.0	chr14	79280412	79280434	(27763284)	+	(TCC)n	Simple_repeat	1	23	(0)	1217537
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
15	21.9	0.0	6.7	chr14	90397289	90397295	(16646423)	+	(TTTTTTG)n	Simple_repeat	1	13	(47)	1233835
16	3.4	6.2	2.9	chr14	90397296	90397327	(16646391)	+	(TTGT)n	Simple_repeat	1	34	(0)	1233836
15	21.9	0.0	6.7	chr14	90397328	90397348	(16646370)	+	(TTTTTTG)n	Simple_repeat	14	60	(0)	1233835
272	25.7	7.1	1.9	chr14	90399672	90399778	(16643940)	+	AmnSINE1	SINE/5S-Deu-L2	117	229	(346)	1233839
14	21.1	3.8	3.6	chr14	91060370	91060422	(15983296)	+	(CCG)n	Simple_repeat	1	55	(0)	1234941
39	15.4	0.0	0.0	chr14	91397440	91397504	(15646214)	+	(AC)n	Simple_repeat	1	65	(0)	1235627
23	8.2	2.4	2.4	chr14	91510015	91510055	(15533663)	+	(CCG)n	Simple_repeat	1	42	(0)	1235828
1211	23.4	21.5	7.0	chr14	91744165	91744738	(15298980)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	1236247
39	24.7	0.8	3.2	chr14	93332834	93332955	(13710763)	+	(CCG)n	Simple_repeat	1	123	(0)	1239313
24331	8.8	1.7	0.6	chr14	94065491	94071367	(12972351)	+	L1PB1	LINE/L1	252	6220	(647)	1240561
397	20.7	5.3	1.6	chr14	95257981	95259141	(11784577)	+	(GT)n	Simple_repeat	1	1223	(0)	1242681
596	29.2	9.6	0.8	chr14	95461447	95461684	(11582034)	+	LTR82A	LTR/ERVL	78	338	(534)	1243069
272	29.4	19.7	2.3	chr14	95678972	95679229	(11364489)	+	L2	LINE/L2	1501	1814	(1605)	1243505
760	29.2	4.2	1.6	chr14	95679256	95679294	(11364424)	+	L1MEg2	LINE/L1	15	53	(6399)	1243506
4571	9.2	1.9	0.2	chr14	95679295	95679915	(11363803)	+	MER41B	LTR/ERV1	3	634	(0)	1243507
23811	11.9	1.2	1.5	chr14	96001559	96006972	(11036746)	+	L1PA10	LINE/L1	1	5346	(1115)	1244083
15	26.6	3.7	0.0	chr14	96502534	96502587	(10541131)	+	(GGC)n	Simple_repeat	1	56	(0)	1245031
11	10.6	0.0	10.5	chr14	99271098	99271135	(7772583)	+	(CCCCAG)n	Simple_repeat	1	38	(0)	1249753
26	21.6	0.0	0.0	chr14	99272350	99272403	(7771315)	+	(CA)n	Simple_repeat	1	54	(0)	1249759
119	26.3	0.7	1.3	chr14	99657681	99657983	(7385735)	+	(AC)n	Simple_repeat	1	305	(0)	1250382
615	29.7	14.1	2.4	chr14	99802137	99802840	(7240878)	C	L2	LINE/L2	(339)	3080	2281	1250655
233	10.0	0.0	0.0	chr14	99821677	99821706	(7222012)	C	SVA_F	Retroposon/SVA	(1018)	357	328	1250691
271	14.9	0.0	2.1	chr14	99821707	99821723	(7221995)	+	AluYj4	SINE/Alu	232	277	(34)	1250692
432	30.6	11.8	7.2	chr14	99821936	99822280	(7221438)	+	MamRTE1	LINE/RTE-BovB	3450	3812	(0)	1250693
298	18.1	3.9	1.1	chr14	99951946	99952562	(7091156)	+	(GATGGT)n	Simple_repeat	1	636	(0)	1250888
38	23.2	5.4	3.4	chr14	100238902	100239067	(6804651)	+	(GAGGC)n	Simple_repeat	1	175	(0)	1251501
19	29.6	0.0	0.0	chr14	100239373	100239449	(6804269)	+	(CGACGG)n	Simple_repeat	1	77	(0)	1251503
33	2.9	0.0	0.0	chr14	100239451	100239485	(6804233)	+	(CCA)n	Simple_repeat	1	35	(0)	1251504
22	26.9	2.2	7.1	chr14	100239703	100239839	(6803879)	+	(GGC)n	Simple_repeat	1	140	(0)	1251505
32	17.2	3.3	4.2	chr14	100240046	100240137	(6803581)	+	(GGC)n	Simple_repeat	1	95	(0)	1251506
510	25.2	15.4	2.1	chr14	100373534	100373768	(6669950)	C	MamRep137	DNA/TcMar-Tigger	(70)	440	169	1251754
48	0.0	0.0	0.0	chr14	100373825	100373865	(6669853)	+	(TG)n	Simple_repeat	1	41	(0)	1251755
397	23.0	15.4	8.3	chr14	100375757	100375984	(6667734)	+	MIR	SINE/MIR	2	248	(14)	1251756
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
755	30.6	6.3	8.2	chr14	100578442	100578856	(6464862)	+	MLT1J	LTR/ERVL-MaLR	2	411	(101)	1252081
709	24.4	2.7	1.1	chr14	100663242	100663423	(6380295)	C	MIR	SINE/MIR	(4)	258	74	1252228
3270	22.3	7.4	2.6	chr14	100761961	100762498	(6281220)	+	L1MB8	LINE/L1	5780	6349	(2)	1252355
29	0.0	0.0	0.0	chr14	101464038	101464062	(5579656)	+	(CA)n	Simple_repeat	1	25	(0)	1253175
1493	27.4	10.3	6.3	chr14	101792362	101792872	(5250846)	C	L1MC5a	LINE/L1	(784)	1993	1465	1253655
2194	13.1	0.7	0.0	chr14	101792873	101793177	(5250541)	C	AluSz	SINE/Alu	(5)	307	1	1253656
13	24.5	1.9	3.8	chr14	101964805	101964856	(5078862)	+	(GCG)n	Simple_repeat	1	53	(0)	1253967
14	14.9	5.4	0.0	chr14	102086933	102086969	(4956749)	+	(CCCCAGT)n	Simple_repeat	1	39	(0)	1254193
1909	24.2	7.2	0.9	chr14	102262461	102263111	(4780607)	C	Kanga2_a	DNA/TcMar-Tc2	(95)	793	99	1254516
443	27.7	19.3	0.2	chr14	102314496	102314893	(4728825)	C	L2a	LINE/L2	(5)	3421	2930	1254648
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
218	28.1	11.1	1.0	chr14	102317598	102317694	(4726024)	C	L2a	LINE/L2	(4)	3422	3315	1254660
22	22.7	0.0	1.7	chr14	102319768	102319825	(4723893)	+	(GGC)n	Simple_repeat	1	58	(0)	1254667
103	19.0	1.8	0.9	chr14	102498843	102499067	(4544651)	+	(ACCAC)n	Simple_repeat	1	229	(0)	1255041
2075	3.7	12.7	0.7	chr14	102516134	102516403	(4527315)	C	AluY	SINE/Alu	(4)	307	1	1255066
249	25.8	6.8	2.4	chr14	102516479	102516605	(4527113)	+	L1ME3G	LINE/L1	442	574	(350)	1255067
1582	19.7	1.4	1.2	chr14	102525254	102525597	(4518121)	+	L1MB3	LINE/L1	5698	6042	(141)	1255089
79	6.9	0.9	0.9	chr14	102525619	102525727	(4517991)	+	(TTCC)n	Simple_repeat	1	110	(0)	1255090
71	20.1	4.4	2.8	chr14	102525728	102525924	(4517794)	+	(CTTT)n	Simple_repeat	1	201	(0)	1255091
803	19.7	3.5	4.2	chr14	102919454	102921343	(4122375)	+	(ACCATCC)n	Simple_repeat	6	1884	(0)	1255901
303	31.3	7.9	3.5	chr14	103074431	103074599	(3969119)	+	MIR	SINE/MIR	64	240	(22)	1256155
37	0.0	0.0	0.0	chr14	103103798	103103829	(3939889)	+	(GT)n	Simple_repeat	1	32	(0)	1256203
29	0.0	0.0	0.0	chr14	103105359	103105383	(3938335)	+	(TG)n	Simple_repeat	1	25	(0)	1256205
34	0.0	0.0	0.0	chr14	103140627	103140655	(3903063)	+	(GA)n	Simple_repeat	1	29	(0)	1256259
329	33.9	6.2	1.1	chr14	103140877	103141058	(3902660)	C	L2	LINE/L2	(2094)	1325	1134	1256260
1396	9.7	1.4	1.8	chr14	103361604	103361824	(3681894)	C	Tigger7	DNA/TcMar-Tigger	(78)	2413	2194	1256645
2011	19.5	2.2	0.3	chr14	103361818	103362166	(3681552)	C	Tigger7	DNA/TcMar-Tigger	(2135)	356	1	1256646
16	18.9	2.3	2.2	chr14	103385444	103385487	(3658231)	+	(GCG)n	Simple_repeat	1	45	(0)	1256712
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
12	11.2	3.2	3.1	chr14	103522181	103522211	(3521507)	+	G-rich	Low_complexity	1	32	(0)	1256989
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
267	27.0	3.9	1.3	chr14	104131009	104131083	(2912635)	+	MIR3	SINE/MIR	81	157	(51)	1258131
360	21.9	2.5	1.5	chr14	104231784	104232672	(2811046)	+	(TCA)n	Simple_repeat	1	911	(0)	1258208
582	28.2	5.9	9.1	chr14	104275861	104276045	(2767673)	+	MLT1I-int	LTR/ERVL-MaLR	1	192	(1195)	1258253
2282	10.2	0.0	0.0	chr14	104276046	104276340	(2767378)	+	AluSx1	SINE/Alu	1	295	(17)	1258254
582	28.2	5.9	9.1	chr14	104276341	104276505	(2767213)	+	MLT1I-int	LTR/ERVL-MaLR	193	339	(1048)	1258253
1479	22.3	11.5	0.9	chr14	104341595	104341920	(2701798)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1258325
22	16.2	2.0	2.0	chr14	104677815	104677864	(2365854)	+	(CCT)n	Simple_repeat	1	51	(0)	1258705
13	26.6	2.9	4.3	chr14	104753024	104753091	(2290627)	+	(CCGCG)n	Simple_repeat	1	70	(0)	1258777
12	20.3	6.7	0.0	chr14	104865760	104865804	(2177914)	+	(CCCCGG)n	Simple_repeat	1	48	(0)	1258950
17	18.7	1.4	9.5	chr14	104865851	104865923	(2177795)	+	(CCT)n	Simple_repeat	1	74	(0)	1258951
146	24.8	0.0	0.0	chr14	104979743	104980078	(2063640)	+	(AC)n	Simple_repeat	1	336	(0)	1259050
14	15.1	9.4	1.7	chr14	104980125	104980177	(2063541)	+	(CAGACA)n	Simple_repeat	1	58	(0)	1259051
15	20.6	0.0	2.4	chr14	105021988	105022028	(2021690)	+	(GGCAGG)n	Simple_repeat	1	41	(0)	1259102
244	26.6	6.8	3.1	chr14	105022089	105022216	(2021502)	C	L2	LINE/L2	(525)	2894	2762	1259103
1568	16.6	0.0	4.1	chr14	105022218	105022488	(2021230)	C	AluJr	SINE/Alu	(44)	268	9	1259104
214	33.6	5.3	1.8	chr14	105094109	105094217	(1949501)	C	L2c	LINE/L2	(0)	3387	3275	1259238
263	26.9	0.0	0.0	chr14	105094780	105094846	(1948872)	C	L2c	LINE/L2	(557)	2862	2796	1259238
2304	9.8	0.0	2.9	chr14	105301857	105302172	(1741546)	+	AluSq2	SINE/Alu	3	309	(4)	1259494
14	19.9	6.6	3.1	chr14	105398207	105398267	(1645451)	+	(CGCCC)n	Simple_repeat	1	65	(0)	1259622
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
230	32.2	0.0	1.1	chr14	105415419	105415506	(1628212)	C	HAL1b	LINE/L1	(116)	2305	2219	1259657
1828	10.8	0.0	14.8	chr14	105511246	105511597	(1532121)	+	AluSx1	SINE/Alu	1	300	(12)	1259769
42	0.0	0.0	0.0	chr14	105511701	105511736	(1531982)	+	(AC)n	Simple_repeat	1	36	(0)	1259770
283	36.5	3.2	4.1	chr15	28897132	28897177	(73094012)	+	L1ME3A	LINE/L1	68	117	(2660)	1274713
36	0.0	0.0	2.9	chr15	28897178	28897212	(73093977)	+	(AC)n	Simple_repeat	1	35	(0)	1274714
1020	23.9	1.9	3.7	chr15	28897213	28897333	(73093856)	+	L1ME3A	LINE/L1	5372	5482	(691)	1274713
2336	11.2	0.0	1.0	chr15	28897334	28897647	(73093542)	+	AluSx1	SINE/Alu	2	312	(0)	1274715
381	26.0	2.0	0.0	chr15	29550843	29550942	(72440247)	C	MIR3	SINE/MIR	(30)	178	77	1275613
537	24.3	5.9	2.7	chr15	29551090	29551237	(72439952)	+	MLT1N2	LTR/ERVL-MaLR	22	174	(388)	1275614
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
2254	11.5	4.5	3.5	chr15	34588273	34588649	(67402540)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1283072
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
33	7.5	0.0	0.0	chr15	40092435	40092476	(61898713)	+	(AC)n	Simple_repeat	1	42	(0)	1290671
12	22.6	2.3	2.3	chr15	40092604	40092646	(61898543)	+	A-rich	Low_complexity	1	44	(0)	1290672
19	19.1	5.8	2.7	chr15	40405829	40405897	(61585292)	+	(TGGCGGC)n	Simple_repeat	1	73	(0)	1291144
729	1.2	0.0	0.0	chr15	40593825	40593906	(61397283)	C	tRNA-Ser-AGY	tRNA	(3)	82	1	1291509
198	28.6	0.9	11.8	chr15	40755503	40755629	(61235560)	+	L2c	LINE/L2	2971	3083	(343)	1291862
411	7.1	28.4	3.0	chr15	40755640	40755738	(61235451)	C	AluJr	SINE/Alu	(178)	134	1	1291863
23	18.4	2.0	0.0	chr15	41116161	41116210	(60874979)	+	(GGC)n	Simple_repeat	1	51	(0)	1292535
12	8.9	4.2	0.0	chr15	41116515	41116538	(60874651)	+	(AGG)n	Simple_repeat	1	25	(0)	1292536
13	16.0	0.0	3.2	chr15	43493120	43493150	(58498039)	+	(CGC)n	Simple_repeat	1	31	(0)	1297100
458	35.1	1.5	2.3	chr15	43510183	43510408	(58480781)	C	L3b	LINE/CR1	(136)	5096	4917	1297147
18	4.7	0.0	0.0	chr15	43510503	43510524	(58480665)	+	(A)n	Simple_repeat	1	22	(0)	1297148
15	25.1	3.5	1.7	chr15	43510525	43510558	(58480631)	+	(ACAA)n	Simple_repeat	3	60	(0)	1297149
19	4.0	0.0	0.0	chr15	44537197	44537222	(57453967)	+	(GGC)n	Simple_repeat	1	26	(0)	1299120
643	2.8	0.0	0.0	chr15	45201151	45201222	(56789967)	+	tRNA-His-CAY_	tRNA	1	72	(3)	1300220
15	18.4	2.7	0.0	chr15	48178231	48178267	(53812922)	+	(CCG)n	Simple_repeat	1	38	(0)	1304453
36	0.0	0.0	0.0	chr15	48250677	48250707	(53740482)	+	(CA)n	Simple_repeat	1	31	(0)	1304548
12	16.3	2.8	2.7	chr15	52019123	52019158	(49972031)	+	G-rich	Low_complexity	1	37	(0)	1310540
27	3.5	0.0	0.0	chr15	52019445	52019474	(49971715)	+	(CGG)n	Simple_repeat	1	30	(0)	1310541
14	23.8	2.8	5.5	chr15	52295645	52295715	(49695474)	+	G-rich	Low_complexity	1	73	(0)	1311056
811	31.9	11.7	2.5	chr15	52295995	52296782	(49694407)	+	L1M5	LINE/L1	4210	5079	(1067)	1311057
592	30.7	12.3	5.2	chr15	52557989	52558169	(49433020)	C	Tigger12	DNA/TcMar-Tigger	(2067)	408	227	1311499
1692	18.5	1.3	3.5	chr15	52558170	52558488	(49432701)	+	AluJb	SINE/Alu	1	312	(0)	1311500
227	30.0	4.8	2.9	chr15	57950719	57950821	(44040368)	+	L2c	LINE/L2	3282	3386	(1)	1319435
33	3.1	0.0	0.0	chr15	59300297	59300329	(42690860)	+	(CA)n	Simple_repeat	1	33	(0)	1321789
542	11.4	12.0	0.0	chr15	59586971	59587058	(42404131)	C	LTR48B	LTR/ERV1	(517)	127	28	1322388
20	11.6	0.0	8.9	chr15	63042597	63042652	(38948537)	+	G-rich	Low_complexity	1	56	(0)	1327869
13	21.5	2.9	7.1	chr15	63042762	63042829	(38948360)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	1327870
235	24.2	10.2	0.0	chr15	63601064	63601187	(38390002)	+	MIRc	SINE/MIR	23	171	(97)	1328846
2271	11.5	0.0	0.0	chr15	64326362	64326656	(37664533)	+	AluSx1	SINE/Alu	1	295	(17)	1330156
27102	1.2	0.1	0.0	chr15	64326661	64332685	(37658504)	+	L1PA2	LINE/L1	124	6153	(2)	1330157
234	31.2	6.6	3.8	chr15	64842199	64842378	(37148811)	C	MIRb	SINE/MIR	(39)	229	39	1331339
503	28.3	11.8	2.1	chr15	64848175	64848412	(37142777)	+	MIRb	SINE/MIR	5	268	(0)	1331350
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
44	13.7	1.6	8.5	chr15	65319137	65319247	(36671942)	+	(TCT)n	Simple_repeat	1	103	(0)	1332389
2175	9.2	0.0	0.3	chr15	65319248	65319539	(36671650)	C	AluSg4	SINE/Alu	(18)	292	2	1332390
44	0.0	0.0	0.0	chr15	65422520	65422557	(36568632)	+	(AC)n	Simple_repeat	1	38	(0)	1332585
27	0.0	5.4	2.6	chr15	65531541	65531577	(36459612)	+	(TTCT)n	Simple_repeat	1	39	(0)	1332847
2483	5.6	0.0	0.0	chr15	65531578	65531865	(36459324)	C	AluSq2	SINE/Alu	(25)	288	1	1332848
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
565	14.4	1.1	0.0	chr15	65841240	65841329	(36149860)	+	FLAM_A	SINE/Alu	42	132	(10)	1333457
1331	16.5	0.7	13.3	chr15	65841341	65841685	(36149504)	+	AluJr	SINE/Alu	2	302	(10)	1333458
638	4.0	0.0	0.0	chr15	65869059	65869133	(36122056)	C	tRNA-Gln-CAG	tRNA	(0)	75	1	1333537
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
442	30.3	6.9	11.4	chr15	66401475	66401958	(35589231)	C	L2c	LINE/L2	(4)	3383	2923	1334632
12	10.3	6.1	2.9	chr15	66766185	66766217	(35224972)	+	G-rich	Low_complexity	1	35	(0)	1335414
508	24.6	10.5	2.7	chr15	66766355	66766541	(35224648)	+	MIRb	SINE/MIR	17	220	(48)	1335415
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
198	11.4	0.0	2.8	chr15	66851714	66851749	(35139440)	C	L2	LINE/L2	(774)	2645	2611	1335581
538	31.8	13.7	4.1	chr15	66983344	66984043	(35007146)	+	L2c	LINE/L2	2604	3387	(0)	1335824
241	30.0	13.2	5.8	chr15	66995037	66995365	(34995824)	+	L2b	LINE/L2	1667	2023	(1396)	1335848
292	23.3	4.1	10.1	chr15	66995366	66995494	(34995695)	+	L2-3_Crp	LINE/L2	859	979	(1117)	1335849
792	33.0	11.5	5.3	chr15	66995495	66996473	(34994716)	+	L2b	LINE/L2	2323	3374	(1)	1335848
13	11.6	0.0	6.2	chr15	67175112	67175143	(34816046)	+	GA-rich	Low_complexity	1	32	(0)	1336206
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
2391	10.8	0.0	0.0	chr15	67614992	67615297	(34375892)	C	AluSq2	SINE/Alu	(7)	306	1	1336895
1010	0.0	0.0	0.0	chr15	67839939	67840045	(34151144)	C	U6	snRNA	(0)	107	1	1337203
203	33.6	6.6	2.6	chr15	67841097	67841212	(34149977)	C	L2c	LINE/L2	(1)	3386	3266	1337206
21	26.9	2.0	4.8	chr15	68054173	68054274	(33936915)	+	G-rich	Low_complexity	1	104	(0)	1337661
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
267	18.3	11.8	4.7	chr15	69074759	69074844	(32916345)	C	MamTip1	DNA/hAT-Tip100	(0)	267	175	1339573
342	31.8	5.9	8.6	chr15	69089837	69090035	(32901154)	C	MamGypLTR1b	LTR/Gypsy	(114)	668	466	1339602
41	2.5	0.0	0.0	chr15	69090036	69090075	(32901114)	+	(GT)n	Simple_repeat	1	40	(0)	1339603
342	31.8	5.9	8.6	chr15	69090076	69090188	(32901001)	C	MamGypLTR1b	LTR/Gypsy	(317)	465	365	1339602
307	24.4	6.2	6.9	chr15	69090208	69090352	(32900837)	C	MamGypLTR1b	LTR/Gypsy	(480)	302	159	1339602
303	26.0	0.0	6.3	chr15	69143826	69143936	(32847253)	C	MIRb	SINE/MIR	(0)	268	165	1339719
245	19.7	0.0	13.2	chr15	69159963	69160038	(32831151)	+	MER94B	DNA/hAT-Blackjack	68	133	(0)	1339741
1954	9.8	7.1	0.0	chr15	69462458	69462732	(32528457)	C	AluSp	SINE/Alu	(17)	296	1	1340266
37	29.5	0.0	0.0	chr15	69761265	69761315	(32229874)	+	(ATCC)n	Simple_repeat	1	51	(0)	1340864
96	11.4	0.0	0.0	chr15	69761316	69761476	(32229713)	+	(CATC)n	Simple_repeat	1	161	(0)	1340865
37	29.5	0.0	0.0	chr15	69761477	69761538	(32229651)	+	(ATCC)n	Simple_repeat	4	65	(0)	1340866
454	32.0	5.0	5.7	chr15	69761541	69761799	(32229390)	C	L2b	LINE/L2	(0)	3426	3149	1340867
393	28.3	4.8	2.8	chr15	69958467	69958608	(32032581)	+	L1ME3G	LINE/L1	398	542	(455)	1341215
257	10.8	0.0	0.0	chr15	69958672	69958708	(32032481)	+	LTR67B	LTR/ERVL	82	118	(502)	1341216
700	29.8	8.6	3.9	chr15	69958678	69959065	(32032124)	+	MLT1J	LTR/ERVL-MaLR	102	509	(3)	1341217
557	29.2	2.3	4.9	chr15	69959070	69959332	(32031857)	+	L1ME3G	LINE/L1	542	797	(127)	1341215
17	4.9	0.0	0.0	chr15	70096656	70096676	(31894513)	+	(CA)n	Simple_repeat	1	21	(0)	1341461
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
385	30.0	10.7	8.3	chr15	70398074	70398545	(31592644)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	58	1342073
36	0.0	0.0	0.0	chr15	70398549	70398579	(31592610)	+	(GT)n	Simple_repeat	1	31	(0)	1342074
21	4.0	0.0	0.0	chr15	70398580	70398605	(31592584)	+	(AG)n	Simple_repeat	1	26	(0)	1342075
499	27.5	7.6	2.1	chr15	70494269	70494454	(31496735)	C	MIR	SINE/MIR	(10)	252	56	1342255
436	29.8	10.2	0.0	chr15	70507990	70508147	(31483042)	C	MIRb	SINE/MIR	(18)	250	75	1342277
159	20.2	1.2	0.6	chr15	70530220	70530562	(31460627)	+	(ACACAC)n	Simple_repeat	1	347	(0)	1342320
224	14.5	4.8	5.8	chr15	70558586	70559230	(31431959)	+	(CA)n	Simple_repeat	1	676	(0)	1342368
1128	22.7	10.1	9.1	chr15	70716024	70716474	(31274715)	+	MLT1H	LTR/ERVL-MaLR	56	511	(38)	1342620
221	24.5	1.9	1.9	chr15	70716476	70716529	(31274660)	C	MIRb	SINE/MIR	(207)	61	8	1342621
1982	15.1	0.3	0.3	chr15	71130187	71130485	(30860704)	C	AluJb	SINE/Alu	(13)	299	1	1343254
236	29.9	13.2	2.0	chr15	71364185	71364385	(30626804)	+	MIRb	SINE/MIR	4	230	(38)	1343622
254	18.8	17.5	1.2	chr15	71364445	71364525	(30626664)	+	MIR	SINE/MIR	76	172	(90)	1343623
211	30.3	0.0	0.0	chr15	71364575	71364640	(30626549)	C	L2b	LINE/L2	(210)	3165	3100	1343624
26267	5.6	0.4	0.1	chr15	71367293	71372997	(30618192)	C	L1PA5	LINE/L1	(0)	6154	429	1343629
384	31.1	5.3	3.6	chr15	71373120	71373399	(30617790)	C	L1M5	LINE/L1	(3209)	2937	2653	1343630
1268	28.2	5.1	2.9	chr15	71385379	71385798	(30605391)	C	MER57A1	LTR/ERV1	(2)	430	1	1343642
263	28.6	4.9	0.0	chr15	71385802	71385878	(30605311)	C	MIR3	SINE/MIR	(21)	187	107	1343647
2815	15.2	0.6	3.1	chr15	71747410	71747892	(30243297)	C	LTR44	LTR/ERV1	(0)	519	49	1344284
2091	13.4	0.9	1.2	chr15	71747897	71748220	(30242969)	C	MER49	LTR/ERV1	(600)	323	1	1344285
285	26.3	0.0	3.8	chr15	72113613	72113691	(29877498)	+	MLT1M	LTR/ERVL-MaLR	1	76	(596)	1344926
18	30.1	0.0	1.6	chr15	72117939	72118001	(29873188)	+	(CCG)n	Simple_repeat	1	63	(0)	1344929
12	17.0	2.2	6.5	chr15	72230804	72230848	(29760341)	+	(GAGGATG)n	Simple_repeat	1	46	(0)	1345108
1340	7.0	0.0	0.6	chr15	72687125	72687282	(29303907)	C	AluSq2	SINE/Alu	(20)	293	137	1345918
2504	8.9	0.0	0.0	chr15	72687322	72687623	(29303566)	+	AluSz	SINE/Alu	1	302	(10)	1345919
739	23.5	2.1	2.1	chr15	72917167	72917458	(29073731)	+	L1ME4b	LINE/L1	5602	5818	(306)	1346319
462	24.2	11.5	5.6	chr15	72968363	72968664	(29022525)	C	Tigger16a	DNA/TcMar-Tigger	(100)	857	536	1346389
315	33.9	10.0	1.1	chr15	72968847	72969028	(29022161)	+	MIRb	SINE/MIR	46	245	(23)	1346390
301	32.5	8.6	0.5	chr15	73009189	73009380	(28981809)	C	L3	LINE/CR1	(156)	3943	3735	1346449
786	16.3	9.3	0.7	chr15	73009491	73009637	(28981552)	+	AluJr	SINE/Alu	140	300	(12)	1346450
226	35.1	1.3	0.0	chr15	73075481	73075554	(28915635)	C	MamSINE1	SINE/tRNA-RTE	(17)	273	199	1346567
221	35.0	8.7	1.4	chr15	73306180	73306318	(28684871)	C	MamRTE1	LINE/RTE-BovB	(2861)	951	802	1346914
13	19.7	4.0	3.9	chr15	73633748	73633797	(28357392)	+	(CCTCCTT)n	Simple_repeat	1	52	(0)	1347428
1441	19.4	11.9	4.2	chr15	73654580	73655098	(28336091)	+	MER34A1	LTR/ERV1	11	568	(19)	1347480
7547	15.9	17.7	2.2	chr15	73891377	73892853	(28098336)	+	MER52A	LTR/ERV1	1	1755	(0)	1347898
200	29.5	0.0	16.7	chr15	74204564	74204650	(27786539)	C	L3	LINE/CR1	(127)	3972	3900	1348439
2327	11.5	0.0	0.6	chr15	74204651	74204964	(27786225)	+	AluSx	SINE/Alu	1	312	(0)	1348440
671	29.1	13.2	3.4	chr15	74210189	74210569	(27780620)	+	L1ME3G	LINE/L1	376	799	(125)	1348446
60	4.4	1.4	1.4	chr15	74223724	74223796	(27767393)	+	(AC)n	Simple_repeat	1	74	(0)	1348475
14	30.0	0.0	5.3	chr15	74318141	74318216	(27672973)	+	G-rich	Low_complexity	1	76	(0)	1348646
1268	24.3	11.3	5.9	chr15	74490026	74490757	(27500432)	+	L2a	LINE/L2	2645	3426	(0)	1348922
6788	23.9	7.0	10.4	chr15	74496742	74497999	(27493190)	C	ERV3-16A3_I-int	LTR/ERVL	(2702)	2524	1247	1348929
2371	5.8	0.3	2.3	chr15	74938407	74938716	(27052473)	+	AluSp	SINE/Alu	3	306	(7)	1349818
196	24.1	3.3	3.3	chr15	75198530	75198589	(26792600)	+	MIRb	SINE/MIR	35	94	(174)	1350391
1119	12.9	38.6	6.5	chr15	75198624	75199037	(26792152)	C	MER51A	LTR/ERV1	(0)	634	5	1350392
16	16.6	0.0	4.1	chr15	75210340	75210379	(26780810)	+	G-rich	Low_complexity	1	38	(0)	1350404
2280	10.0	0.3	0.0	chr15	75449780	75450079	(26541110)	C	AluSq2	SINE/Alu	(12)	301	1	1350821
18	16.4	2.4	0.0	chr15	75454670	75454710	(26536479)	+	(CGCGCC)n	Simple_repeat	1	42	(0)	1350823
274	31.4	4.8	7.3	chr15	75626243	75626393	(26364796)	+	L2b	LINE/L2	3221	3367	(8)	1351238
13	17.6	0.0	2.9	chr15	76338004	76338037	(25653152)	+	G-rich	Low_complexity	1	34	(0)	1352424
182	17.1	14.6	0.0	chr15	78437732	78437772	(23553417)	C	L2c	LINE/L2	(0)	3387	3340	1355902
367	26.1	14.7	2.0	chr15	78536040	78536250	(23454939)	C	MIRc	SINE/MIR	(0)	262	9	1356128
13	4.3	3.9	3.7	chr15	78536268	78536293	(23454896)	+	(CTCTC)n	Simple_repeat	1	27	(0)	1356129
42	7.8	0.0	0.0	chr15	78536299	78536352	(23454837)	+	(AC)n	Simple_repeat	1	54	(0)	1356130
113	30.4	1.1	1.1	chr15	79339572	79339933	(22651256)	+	(TGG)n	Simple_repeat	1	366	(0)	1357698
190	17.4	9.8	0.0	chr15	80906494	80906539	(21084650)	+	MIR3	SINE/MIR	95	145	(63)	1360323
16	4.5	0.0	0.0	chr15	80989715	80989737	(21001452)	+	(AGC)n	Simple_repeat	1	23	(0)	1360490
367	27.2	15.6	2.8	chr15	82260611	82260777	(19730412)	C	MIRb	SINE/MIR	(67)	201	27	1362611
251	38.4	6.7	0.0	chr15	82260853	82260964	(19730225)	+	MER117	DNA/hAT-Charlie	4	123	(74)	1362612
2348	8.6	0.0	1.3	chr15	82737821	82738123	(19253066)	+	AluY	SINE/Alu	1	299	(12)	1363352
420	35.0	8.7	3.7	chr15	83010833	83011235	(18979954)	C	L2c	LINE/L2	(36)	3351	2927	1363867
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
1103	32.1	12.7	4.0	chr15	85044621	85045315	(16945874)	+	L2b	LINE/L2	2599	3375	(0)	1367175
280	27.3	9.3	4.7	chr15	88466996	88467123	(13524066)	C	MIRb	SINE/MIR	(25)	205	75	1372452
14	25.4	3.1	3.0	chr15	88546596	88546659	(13444530)	+	(GCCCCT)n	Simple_repeat	1	66	(0)	1372570
2968	20.5	3.8	1.1	chr15	88985852	88986472	(13004717)	C	LTR9B	LTR/ERV1	(0)	644	7	1373392
428	33.6	8.0	2.0	chr15	89334120	89334365	(12656824)	+	MIRb	SINE/MIR	5	266	(2)	1374038
12	13.7	6.2	0.0	chr15	89334445	89334476	(12656713)	+	(ACCCAC)n	Simple_repeat	1	34	(0)	1374039
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
15	10.7	0.0	5.9	chr15	89359170	89359203	(12631986)	+	(CCTC)n	Simple_repeat	1	34	(0)	1374096
12	15.4	3.3	9.5	chr15	90388176	90388236	(11602953)	+	G-rich	Low_complexity	1	63	(0)	1376268
30	14.1	5.6	1.3	chr15	92734201	92734272	(9256917)	+	(CGC)n	Simple_repeat	1	76	(0)	1380325
24	26.7	3.1	2.0	chr15	92882610	92882706	(9108483)	+	(GCGGCGG)n	Simple_repeat	1	100	(0)	1380695
16	20.8	2.3	0.0	chr15	92882778	92882821	(9108368)	+	GA-rich	Low_complexity	1	45	(0)	1380696
426	22.4	0.0	0.0	chr15	95559825	95559900	(6431289)	+	MER44A	DNA/TcMar-Tigger	1	76	(263)	1384632
1476	20.6	0.0	0.0	chr15	95559902	95560173	(6431016)	C	MER44B	DNA/TcMar-Tigger	(204)	346	75	1384633
1617	15.1	2.2	8.0	chr15	95560172	95560510	(6430679)	+	Tigger7	DNA/TcMar-Tigger	2147	2465	(26)	1384634
434	26.0	5.9	3.5	chr15	98001371	98002854	(3988335)	+	(TG)n	Simple_repeat	1	1518	(0)	1387965
20	28.8	2.0	4.0	chr15	101251700	101251798	(739391)	+	(CGG)n	Simple_repeat	1	101	(0)	1392534
2339	6.0	0.0	0.0	chr16	234079	234389	(90103956)	C	AluY	SINE/Alu	(0)	311	1	1394434
2192	10.0	0.7	0.0	chr16	323500	323776	(90014569)	+	AluYm1	SINE/Alu	1	279	(32)	1394580
31	0.0	0.0	0.0	chr16	323777	323803	(90014542)	+	(CA)n	Simple_repeat	1	27	(0)	1394581
2192	10.0	0.7	0.0	chr16	323804	323816	(90014529)	+	AluYm1	SINE/Alu	281	293	(18)	1394580
1937	7.0	13.1	0.4	chr16	402163	402434	(89935911)	C	AluSx	SINE/Alu	(0)	312	1	1394695
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
13	14.2	5.6	7.0	chr16	788596	788649	(89549696)	+	(GGC)n	Simple_repeat	1	57	(0)	1395212
57	0.0	0.0	0.0	chr16	981283	981303	(89357042)	+	(TG)n	Simple_repeat	1	21	(0)	1395376
53	0.0	0.0	0.0	chr16	981304	981348	(89356997)	+	(GA)n	Simple_repeat	1	45	(0)	1395377
57	0.0	0.0	0.0	chr16	981349	981391	(89356954)	+	(TG)n	Simple_repeat	2	44	(0)	1395378
1055	8.0	3.9	2.8	chr16	1032545	1034717	(89303628)	+	(ATCC)n	Simple_repeat	1	2258	(0)	1395429
17	10.7	7.1	2.2	chr16	1351946	1351987	(88986358)	+	(GCG)n	Simple_repeat	1	45	(0)	1395772
17	13.7	0.0	0.0	chr16	1773265	1773296	(88565049)	+	(GCCGGG)n	Simple_repeat	1	32	(0)	1396373
27	13.7	0.0	0.0	chr16	1964480	1964527	(88373818)	+	(CCCCGG)n	Simple_repeat	1	48	(0)	1396721
722	23.7	6.3	1.1	chr16	2010039	2010217	(88328128)	C	MER53	DNA/hAT	(4)	189	1	1396770
11	28.0	0.0	0.0	chr16	2027541	2027579	(88310766)	+	(GTGCGT)n	Simple_repeat	1	39	(0)	1396811
19	31.7	0.0	2.8	chr16	2027678	2027748	(88310597)	+	(GT)n	Simple_repeat	1	71	(0)	1396812
12	13.1	2.7	5.3	chr16	2047761	2047797	(88290548)	+	(CGGCTC)n	Simple_repeat	1	38	(0)	1396835
13	19.5	0.0	2.7	chr16	2048028	2048064	(88290281)	+	(GCGCG)n	Simple_repeat	1	37	(0)	1396836
1884	9.3	10.3	0.0	chr16	2154373	2154642	(88183703)	+	AluSp	SINE/Alu	1	301	(12)	1396967
27	18.1	8.6	3.6	chr16	2155886	2155938	(88182407)	+	G-rich	Low_complexity	1	50	(0)	1396968
13	27.1	0.0	2.1	chr16	2205516	2205562	(88132783)	+	G-rich	Low_complexity	1	47	(0)	1397037
17	15.3	2.7	0.0	chr16	2251462	2251498	(88086847)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	1397109
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
257	32.1	14.2	2.5	chr16	2296673	2296870	(88041475)	+	MLT1J	LTR/ERVL-MaLR	43	267	(245)	1397165
13	21.1	2.6	0.0	chr16	2514189	2514226	(87824119)	+	G-rich	Low_complexity	1	39	(0)	1397556
2327	7.6	2.6	0.0	chr16	2720517	2720817	(87617528)	C	AluSc8	SINE/Alu	(2)	309	1	1397805
22	14.9	2.2	0.0	chr16	2721287	2721331	(87617014)	+	G-rich	Low_complexity	1	46	(0)	1397806
2309	9.0	0.0	0.0	chr16	2722914	2723197	(87615148)	C	AluSx	SINE/Alu	(28)	284	1	1397812
703	13.3	0.0	0.0	chr16	2723253	2723350	(87614995)	+	AluSc5	SINE/Alu	193	290	(19)	1397813
2030	18.4	0.5	4.5	chr16	2868695	2868829	(87469516)	+	MER63B	DNA/hAT-Blackjack	33	151	(285)	1398064
862	22.0	13.1	2.3	chr16	2915919	2916064	(87422281)	C	LTR37-int	LTR/ERV1	(35)	4025	3851	1398172
2025	13.0	2.4	0.0	chr16	2916065	2916349	(87421996)	+	AluSz	SINE/Alu	1	292	(20)	1398173
2433	8.6	0.0	0.6	chr16	2916354	2916666	(87421679)	+	AluY	SINE/Alu	1	311	(0)	1398174
507	23.2	0.0	0.0	chr16	2927005	2927099	(87411246)	+	HERVK-int	LTR/ERVK	743	837	(6699)	1398199
1570	24.2	0.0	0.0	chr16	2927166	2927483	(87410862)	+	HERVK-int	LTR/ERVK	847	1164	(6372)	1398199
2266	10.4	1.0	0.0	chr16	3124961	3125258	(87213087)	C	AluSx1	SINE/Alu	(11)	301	1	1398544
252	27.5	5.9	0.0	chr16	3149957	3150036	(87188309)	+	MIRb	SINE/MIR	155	239	(29)	1398595
18	7.7	0.0	0.0	chr16	3150096	3150123	(87188222)	+	(TGGGC)n	Simple_repeat	1	28	(0)	1398596
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
635	0.0	0.0	0.0	chr16	3175691	3175763	(87162582)	+	tRNA-Lys-AAG	tRNA	1	73	(3)	1398660
564	10.3	0.0	0.0	chr16	3175926	3176003	(87162342)	C	AluSq10	SINE/Alu	(235)	78	1	1398661
1096	14.4	0.0	0.0	chr16	3176006	3176178	(87162167)	C	MLT1B	LTR/ERVL-MaLR	(213)	177	5	1398662
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
18	3.8	3.7	0.0	chr16	3184218	3184244	(87154101)	+	(TGT)n	Simple_repeat	1	28	(0)	1398680
2421	6.3	1.0	0.3	chr16	3263367	3263666	(87074679)	C	AluSx4	SINE/Alu	(8)	302	1	1398853
20	27.1	2.7	2.6	chr16	3611596	3611669	(86726676)	+	(CG)n	Simple_repeat	1	76	(0)	1399484
2409	7.6	0.0	3.8	chr16	3853329	3853643	(86484702)	+	AluY	SINE/Alu	1	303	(8)	1399917
2183	11.6	0.0	0.0	chr16	3853655	3853939	(86484406)	+	AluSq2	SINE/Alu	1	285	(28)	1399918
26	0.0	0.0	0.0	chr16	3853940	3853964	(86484381)	+	(AAAC)n	Simple_repeat	1	25	(0)	1399919
17	0.0	0.0	0.0	chr16	3853965	3853983	(86484362)	+	(CA)n	Simple_repeat	1	19	(0)	1399920
1195	13.6	0.0	0.5	chr16	4244104	4244303	(86094042)	+	HUERS-P3-int	LTR/ERV1	8720	8918	(1)	1400737
2704	12.1	7.6	2.8	chr16	4244304	4244803	(86093542)	+	LTR9	LTR/ERV1	1	526	(86)	1400737
189	22.0	0.0	3.9	chr16	4271706	4271757	(86066588)	+	AmnSINE1	SINE/5S-Deu-L2	76	125	(450)	1400801
672	31.6	16.1	0.9	chr16	4283473	4283913	(86054432)	+	L2	LINE/L2	1309	1829	(1590)	1400837
1082	14.9	1.2	0.0	chr16	4283925	4284085	(86054260)	C	AluSc8	SINE/Alu	(13)	298	136	1400841
282	22.8	22.9	4.3	chr16	4284102	4284185	(86054160)	+	L2	LINE/L2	1872	1978	(1441)	1400837
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
21	15.3	6.7	1.6	chr16	4614800	4614859	(85723486)	+	(CGCCTCC)n	Simple_repeat	1	64	(0)	1401530
12	23.0	0.0	4.5	chr16	4614903	4614946	(85723399)	+	(CGCCT)n	Simple_repeat	1	44	(0)	1401531
2257	10.2	0.7	0.7	chr16	4650825	4651127	(85687218)	+	AluSx	SINE/Alu	1	303	(9)	1401610
1863	10.6	0.0	0.8	chr16	4653477	4653753	(85684592)	C	AluSc	SINE/Alu	(0)	309	35	1401614
2278	10.4	0.3	0.0	chr16	4653755	4654051	(85684294)	C	AluSp	SINE/Alu	(15)	298	1	1401615
2594	21.0	10.7	7.3	chr16	4654052	4654371	(85683974)	C	MER21C	LTR/ERVL	(646)	292	10	1401613
26	12.6	3.9	0.0	chr16	4693887	4693938	(85644407)	+	G-rich	Low_complexity	1	54	(0)	1401668
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
1460	9.6	19.4	0.0	chr16	4767449	4767677	(85570668)	+	AluSp	SINE/Alu	3	286	(27)	1401814
1447	16.7	0.8	0.8	chr16	4780154	4780387	(85557958)	C	AluJr	SINE/Alu	(78)	234	1	1401859
778	22.0	3.4	2.8	chr16	4780389	4780566	(85557779)	+	MER58A	DNA/hAT-Charlie	45	223	(1)	1401860
1014	26.2	9.4	2.2	chr16	5034049	5034500	(85303845)	C	L1MC4	LINE/L1	(0)	8042	7555	1402426
49	25.4	0.0	2.3	chr16	5065043	5065174	(85273171)	+	(TGTG)n	Simple_repeat	1	132	(0)	1402492
21	12.2	2.1	4.1	chr16	5071862	5071909	(85266436)	+	(TGC)n	Simple_repeat	1	49	(0)	1402509
203	36.6	2.4	2.4	chr16	8568207	8568332	(81770013)	+	L2c	LINE/L2	3260	3385	(2)	1409296
18	23.9	4.8	5.5	chr16	8568385	8568488	(81769857)	+	(ATG)n	Simple_repeat	1	109	(0)	1409297
12	9.7	0.0	0.0	chr16	8568474	8568495	(81769850)	+	(TGAC)n	Simple_repeat	1	22	(0)	1409298
23	19.9	3.5	0.0	chr16	8568545	8568602	(81769743)	+	(ATG)n	Simple_repeat	1	60	(0)	1409299
21	22.1	5.3	1.3	chr16	9092842	9092916	(81245429)	+	(TTCT)n	Simple_repeat	1	79	(0)	1410577
13	33.0	1.7	0.0	chr16	10944605	10944664	(79393681)	+	(CCG)n	Simple_repeat	1	61	(0)	1414616
17	4.3	0.0	0.0	chr16	11915649	11915672	(78422673)	+	(GCT)n	Simple_repeat	1	24	(0)	1416784
35	0.0	0.0	0.0	chr16	11915674	11915705	(78422640)	+	(CCG)n	Simple_repeat	1	32	(0)	1416785
13	22.7	0.0	0.0	chr16	11915898	11915929	(78422416)	+	(GCG)n	Simple_repeat	1	32	(0)	1416786
235	20.2	28.8	0.0	chr16	12803339	12803442	(77534903)	C	MIR	SINE/MIR	(114)	148	3	1418652
2137	13.2	0.0	0.7	chr16	13830144	13830445	(76507900)	+	AluSz	SINE/Alu	1	300	(12)	1420958
2341	8.5	0.0	0.0	chr16	13960393	13960685	(76377660)	+	AluSx1	SINE/Alu	2	294	(18)	1421208
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
248	24.2	0.5	0.9	chr16	14338162	14338736	(75999609)	+	(TCCA)n	Simple_repeat	1	578	(0)	1421895
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
2246	10.8	0.0	1.0	chr16	15591311	15591594	(74746751)	+	AluSc	SINE/Alu	1	282	(27)	1424783
861	30.8	2.5	4.4	chr16	19136015	19136425	(71201920)	+	LTR16C	LTR/ERVL	83	485	(4)	1432786
310	29.2	4.6	8.3	chr16	19153993	19154149	(71184196)	+	MLT1K	LTR/ERVL-MaLR	69	219	(376)	1432839
468	32.6	13.2	2.5	chr16	19154191	19154627	(71183718)	C	LTR84a	LTR/ERVL	(61)	696	206	1432840
12	13.7	0.0	0.0	chr16	19521893	19521916	(70816429)	+	(CAG)n	Simple_repeat	1	24	(0)	1433766
13	16.5	0.0	0.0	chr16	19523968	19523994	(70814351)	+	GA-rich	Low_complexity	1	27	(0)	1433773
278	15.2	11.9	0.0	chr16	19718619	19718677	(70619668)	C	MIRc	SINE/MIR	(118)	150	84	1434175
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
759	0.0	0.0	0.0	chr16	22195710	22195792	(68142553)	C	tRNA-Leu-CTA	tRNA	(2)	83	1	1439502
297	28.7	11.8	1.9	chr16	22233074	22233233	(68105112)	+	L1ME4c	LINE/L1	540	717	(113)	1439604
301	30.0	5.1	0.0	chr16	22321580	22321709	(68016636)	C	MIR3	SINE/MIR	(60)	148	12	1439836
17	17.4	3.5	5.1	chr16	23149397	23149453	(67188892)	+	(AGCG)n	Simple_repeat	1	59	(0)	1441521
46	7.6	0.0	0.0	chr16	23409065	23409121	(66929224)	+	(GT)n	Simple_repeat	1	57	(0)	1442203
15	29.0	0.0	4.4	chr16	23510188	23510255	(66828090)	+	(CCCGGC)n	Simple_repeat	1	68	(0)	1442437
23	30.6	1.2	0.0	chr16	23510378	23510461	(66827884)	+	(CCGCCG)n	Simple_repeat	1	85	(0)	1442438
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
519	34.1	9.7	1.3	chr16	24344873	24345107	(65993238)	+	MIR	SINE/MIR	6	262	(0)	1444453
20	9.2	0.0	2.7	chr16	25015140	25015176	(65323169)	+	(CCCGCCC)n	Simple_repeat	1	37	(0)	1446012
2573	17.3	2.5	4.2	chr16	25049628	25050152	(65288193)	+	Tigger3b	DNA/TcMar-Tigger	25	540	(691)	1446106
844	23.2	11.4	8.0	chr16	25110536	25110924	(65227421)	C	L1ME3F	LINE/L1	(63)	6180	5777	1446224
2253	10.4	0.3	0.0	chr16	25110961	25111269	(65227076)	C	AluSx1	SINE/Alu	(2)	310	1	1446225
2221	10.2	0.0	0.0	chr16	25233515	25233797	(65104548)	+	AluSx	SINE/Alu	1	283	(29)	1446545
26	6.1	0.0	0.0	chr16	25233801	25233834	(65104511)	+	(AACAA)n	Simple_repeat	1	34	(0)	1446546
344	28.1	10.0	9.3	chr16	25233835	25233928	(65104417)	C	MamGypLTR3	LTR/Gypsy	(206)	688	596	1446544
261	20.5	11.2	4.4	chr16	27203168	27203324	(63135021)	+	MIRb	SINE/MIR	26	200	(62)	1450614
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
190	27.1	11.4	0.0	chr16	28212334	28212403	(62125942)	C	L2b	LINE/L2	(0)	3375	3297	1452867
404	33.1	1.5	0.3	chr16	28277941	28278110	(62060235)	+	MIR	SINE/MIR	43	212	(56)	1453081
272	32.6	5.3	4.4	chr16	28327206	28327410	(62010935)	C	MamGypLTR3a	LTR/Gypsy	(427)	554	348	1453222
18	0.0	0.0	0.0	chr16	28492377	28492396	(61845949)	+	(T)n	Simple_repeat	1	20	(0)	1453673
15	8.9	0.0	0.0	chr16	28823492	28823515	(61514830)	+	(CGC)n	Simple_repeat	1	24	(0)	1454526
12	18.9	0.0	7.1	chr16	28881088	28881129	(61457216)	+	(CTC)n	Simple_repeat	1	42	(0)	1454638
625	21.4	17.2	0.0	chr16	28881193	28881351	(61456994)	+	MIRb	SINE/MIR	74	265	(3)	1454639
19	20.1	0.0	5.3	chr16	28925105	28925161	(61413184)	+	(GCC)n	Simple_repeat	1	57	(0)	1454763
13	11.7	3.6	0.0	chr16	28950961	28950988	(61387357)	+	(GGCGA)n	Simple_repeat	1	29	(0)	1454833
11	13.0	8.8	0.0	chr16	29613511	29613544	(60724801)	+	(CGCCCT)n	Simple_repeat	1	37	(0)	1456097
11	24.4	0.0	0.0	chr16	29974030	29974063	(60364282)	+	G-rich	Low_complexity	1	34	(0)	1457008
11	17.1	2.9	2.8	chr16	29995281	29995315	(60343030)	+	(CCTCCG)n	Simple_repeat	1	36	(0)	1457035
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
248	7.3	7.1	0.6	chr16	30045246	30045752	(60292593)	+	(GT)n	Simple_repeat	1	543	(0)	1457143
14	16.4	2.2	5.5	chr16	30112812	30112858	(60225487)	+	G-rich	Low_complexity	1	45	(0)	1457286
351	23.1	6.1	0.0	chr16	30112891	30112998	(60225347)	C	MER91C	DNA/hAT-Tip100	(22)	118	4	1457287
1804	19.1	0.3	1.0	chr16	30393709	30394017	(59944328)	C	AluJb	SINE/Alu	(5)	307	1	1457923
821	17.8	9.1	5.6	chr16	30394020	30394199	(59944146)	C	AluJr	SINE/Alu	(4)	308	122	1457924
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
501	26.2	9.7	1.5	chr16	30406862	30407082	(59931263)	+	MIRb	SINE/MIR	12	254	(14)	1457954
2426	8.5	0.7	0.0	chr16	30426170	30426474	(59911871)	C	AluY	SINE/Alu	(4)	307	1	1458002
1605	10.4	0.9	0.0	chr16	30426477	30426687	(59911658)	C	AluSx1	SINE/Alu	(15)	297	85	1458003
2372	10.0	0.0	0.3	chr16	30426688	30426998	(59911347)	C	AluSx	SINE/Alu	(0)	312	3	1458004
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
16	19.6	0.0	5.8	chr16	30526709	30526760	(59811585)	+	(GCCCCC)n	Simple_repeat	1	52	(0)	1458285
862	23.1	13.4	2.9	chr16	30598185	30598429	(59739916)	C	LTR40c	LTR/ERVL	(1)	464	190	1458437
751	16.0	0.0	6.4	chr16	30598425	30598451	(59739894)	C	FLAM_C	SINE/Alu	(2)	131	112	1458438
2254	11.4	0.3	0.0	chr16	30598452	30598758	(59739587)	+	AluSq2	SINE/Alu	1	308	(5)	1458439
13	4.7	4.5	0.0	chr16	30676326	30676347	(59661998)	+	(TAT)n	Simple_repeat	1	23	(0)	1458615
595	17.9	1.8	0.9	chr16	30676348	30676460	(59661885)	C	L1MB7	LINE/L1	(17)	6167	6054	1458616
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
15	7.3	3.2	3.1	chr16	30787523	30787553	(59550792)	+	(GGGCTG)n	Simple_repeat	1	32	(0)	1458842
318	32.0	6.6	0.0	chr16	30797213	30797340	(59541005)	C	L4_A_Mam	LINE/RTE-X	(99)	4891	4755	1458871
2444	7.0	0.3	0.3	chr16	30797356	30797654	(59540691)	+	AluSx3	SINE/Alu	1	299	(12)	1458872
411	26.5	17.9	0.0	chr16	30805269	30805419	(59532926)	C	MIR	SINE/MIR	(36)	226	43	1458894
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
309	31.9	6.6	0.0	chr16	30935183	30935295	(59403050)	+	L2a	LINE/L2	3305	3425	(1)	1459236
218	35.8	9.1	0.5	chr16	30935320	30935510	(59402835)	C	L2	LINE/L2	(1813)	1606	1398	1459235
21	19.2	3.2	3.1	chr16	30958013	30958075	(59380270)	+	(CGC)n	Simple_repeat	1	65	(0)	1459289
13	7.1	12.5	3.7	chr16	30997085	30997132	(59341213)	+	(GGATCAG)n	Simple_repeat	1	54	(0)	1459354
12	14.1	3.5	10.0	chr16	31117897	31117954	(59220391)	+	G-rich	Low_complexity	1	60	(0)	1459640
22	15.8	4.3	4.2	chr16	31472119	31472187	(58866158)	+	(CCCCGCG)n	Simple_repeat	1	72	(0)	1460389
13	25.7	2.6	6.2	chr16	31472348	31472425	(58865920)	+	(CCCT)n	Simple_repeat	1	80	(0)	1460390
12	19.4	0.0	5.1	chr16	31472449	31472487	(58865858)	+	(GGCGCGG)n	Simple_repeat	1	39	(0)	1460391
456	24.8	2.3	3.0	chr16	31713772	31713904	(58624441)	C	MER57E3	LTR/ERV1	(4)	483	352	1460719
12	4.3	8.3	0.0	chr16	31869467	31869490	(58468855)	+	(TTTC)n	Simple_repeat	1	26	(0)	1460881
13	25.7	2.1	2.0	chr16	46973349	46973396	(43364949)	+	(CCG)n	Simple_repeat	1	49	(0)	1466442
6096	13.3	6.7	2.7	chr16	47198254	47198991	(43139354)	+	Tigger3b	DNA/TcMar-Tigger	4	792	(439)	1466854
14	23.2	5.3	1.7	chr16	47461027	47461083	(42877262)	+	(GCC)n	Simple_repeat	1	60	(0)	1467211
532	32.5	10.8	1.9	chr16	48123103	48123312	(42215033)	+	L3	LINE/CR1	3849	4079	(20)	1468155
192	25.0	3.2	3.2	chr16	48123313	48123374	(42214971)	C	MIR3	SINE/MIR	(2)	206	145	1468157
237	29.3	2.9	1.1	chr16	48123357	48123446	(42214899)	C	MIRc	SINE/MIR	(68)	200	109	1468158
18	10.5	7.3	0.0	chr16	50369180	50369222	(39969123)	+	(TCTGTC)n	Simple_repeat	1	46	(0)	1472324
64	30.0	2.6	2.9	chr16	50369211	50369478	(39968867)	+	(TCCT)n	Simple_repeat	1	275	(0)	1472325
1784	17.9	0.3	3.2	chr16	50488324	50488503	(39849842)	+	AluJr	SINE/Alu	124	300	(12)	1472597
1040	25.1	12.8	4.3	chr16	50488504	50488997	(39849348)	C	MLT1K	LTR/ERVL-MaLR	(40)	555	9	1472596
171	24.0	5.3	4.2	chr16	50692531	50693302	(39645043)	+	(TG)n	Simple_repeat	1	813	(0)	1473001
19	10.4	0.0	0.0	chr16	51164563	51164593	(39173752)	+	(TGA)n	Simple_repeat	1	31	(0)	1473849
395	27.7	0.4	0.3	chr16	51239240	51240280	(39098065)	+	(GGT)n	Simple_repeat	1	1045	(0)	1474007
47	4.0	0.0	0.0	chr16	51431897	51431948	(38906397)	+	(AGGA)n	Simple_repeat	1	52	(0)	1474350
16	0.0	0.0	0.0	chr16	51762079	51762096	(38576249)	+	(A)n	Simple_repeat	1	18	(0)	1474912
99	27.3	4.1	3.7	chr16	53042154	53042591	(37295754)	+	(CCCT)n	Simple_repeat	1	456	(0)	1477083
14	22.5	0.0	0.0	chr16	53434604	53434654	(36903691)	+	GA-rich	Low_complexity	1	51	(0)	1477845
18	17.6	3.6	3.5	chr16	53502830	53502884	(36835461)	+	G-rich	Low_complexity	1	57	(0)	1477950
14	15.3	2.6	2.6	chr16	53502905	53502942	(36835403)	+	(CCAGCC)n	Simple_repeat	1	39	(0)	1477951
13	20.4	0.0	7.7	chr16	53503207	53503258	(36835087)	+	(CCCGC)n	Simple_repeat	1	52	(0)	1477952
73	26.3	0.0	1.1	chr16	54245928	54246116	(36092229)	+	(TG)n	Simple_repeat	1	189	(0)	1479150
330	21.4	3.9	0.7	chr16	55019355	55020205	(35318140)	+	(CA)n	Simple_repeat	1	884	(0)	1480590
20	23.8	3.6	3.5	chr16	56191467	56191550	(34146795)	+	(TCCCTC)n	Simple_repeat	1	87	(0)	1482660
32	20.2	1.3	1.3	chr16	56191748	56191823	(34146522)	+	(CCG)n	Simple_repeat	1	77	(0)	1482661
16	25.2	0.0	0.0	chr16	56318573	56318610	(34019735)	+	(TG)n	Simple_repeat	1	38	(0)	1482890
15	17.6	0.0	6.7	chr16	56730567	56730611	(33607734)	+	(CCTG)n	Simple_repeat	1	45	(0)	1483653
29	32.1	0.0	1.0	chr16	57057784	57057886	(33280459)	+	(GTG)n	Simple_repeat	1	103	(0)	1484259
39	6.3	0.0	0.0	chr16	57057891	57057940	(33280405)	+	(TGGTGATGG)n	Simple_repeat	1	50	(0)	1484260
13	9.8	0.0	0.0	chr16	57186403	57186424	(33151921)	+	(CGC)n	Simple_repeat	1	22	(0)	1484533
625	8.4	0.0	0.0	chr16	57300480	57300562	(33037783)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	1484768
387	28.4	16.6	1.0	chr16	57462315	57462527	(32875818)	C	L1ME3G	LINE/L1	(344)	580	317	1485115
133	13.0	2.3	2.9	chr16	57628843	57629108	(32709237)	+	(AGTGTG)n	Simple_repeat	1	272	(0)	1485455
151	12.2	6.9	1.7	chr16	57912568	57912900	(32425445)	+	(TG)n	Simple_repeat	1	356	(0)	1486045
11	10.2	2.7	7.9	chr16	58629552	58629588	(31708757)	+	(GTCCCC)n	Simple_repeat	1	38	(0)	1487476
233	21.9	17.6	0.0	chr16	66552063	66552149	(23786196)	C	L2a	LINE/L2	(28)	3398	3263	1499951
32	32.4	1.4	2.7	chr16	66604020	66604163	(23734182)	+	(TG)n	Simple_repeat	1	146	(0)	1500045
1818	14.5	10.6	2.4	chr16	66666481	66667042	(23671303)	+	L1PA16	LINE/L1	6060	7014	(12)	1500142
29	0.0	0.0	0.0	chr16	66688528	66688552	(23649793)	+	(AC)n	Simple_repeat	1	25	(0)	1500208
3841	20.1	3.1	4.2	chr16	66688628	66689414	(23648931)	C	L1MD	LINE/L1	(1479)	4667	3884	1500209
13	15.2	0.0	3.2	chr16	66830711	66830741	(23507604)	+	(CCCGG)n	Simple_repeat	1	31	(0)	1500503
466	31.6	13.7	0.5	chr16	66879815	66880202	(23458143)	C	L2	LINE/L2	(620)	2799	2353	1500613
206	28.6	6.7	0.0	chr16	67018005	67018060	(23320285)	C	MER91C	DNA/hAT-Tip100	(30)	110	51	1500889
2328	9.4	0.3	2.8	chr16	67018424	67018743	(23319602)	+	AluSx	SINE/Alu	1	312	(0)	1500890
13	26.6	0.0	0.0	chr16	67109951	67109987	(23228358)	+	(CCG)n	Simple_repeat	1	37	(0)	1501116
19	7.0	0.0	0.0	chr16	67109988	67110017	(23228328)	+	(AGGTG)n	Simple_repeat	1	30	(0)	1501117
12	22.1	2.7	0.0	chr16	67178507	67178543	(23159802)	+	G-rich	Low_complexity	1	38	(0)	1501222
314	31.0	7.0	0.0	chr16	67278694	67278838	(23059507)	C	MIRb	SINE/MIR	(79)	189	34	1501367
15	15.9	2.9	0.0	chr16	67279108	67279142	(23059203)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1501368
21	22.3	4.4	4.3	chr16	67326772	67326861	(23011484)	+	(GGCG)n	Simple_repeat	1	94	(0)	1501441
12	25.5	0.0	0.0	chr16	67563295	67563331	(22775014)	+	(CCTG)n	Simple_repeat	1	37	(0)	1501894
342	32.8	7.6	5.5	chr16	67834041	67834221	(22504124)	+	MIRb	SINE/MIR	84	268	(0)	1502444
80	4.8	0.0	0.0	chr16	67842863	67842950	(22495395)	+	(GCA)n	Simple_repeat	1	88	(0)	1502468
19	12.9	0.0	2.7	chr16	68085612	68085648	(22252697)	+	(GCC)n	Simple_repeat	1	37	(0)	1502902
11	24.2	5.5	1.7	chr16	68085649	68085665	(22252680)	+	(AGCTGC)n	Simple_repeat	2	58	(0)	1502903
185	20.0	2.8	0.0	chr16	68448974	68449008	(21889337)	+	MIR3	SINE/MIR	112	147	(61)	1503546
1016	27.9	7.3	7.8	chr16	68843233	68843428	(21494917)	+	MER20B	DNA/hAT-Charlie	485	686	(97)	1504476
2455	8.6	0.0	0.0	chr16	68847718	68848019	(21490326)	+	AluSx	SINE/Alu	1	302	(10)	1504490
653	34.0	5.2	2.8	chr16	69293417	69293843	(21044502)	C	L2	LINE/L2	(1359)	2060	1623	1505512
853	16.0	1.5	0.0	chr16	69310499	69310629	(21027716)	C	FLAM_C	SINE/Alu	(10)	133	1	1505542
212	29.1	5.2	0.0	chr16	69310636	69310690	(21027655)	+	L2b	LINE/L2	3288	3345	(30)	1505543
1134	8.2	0.0	0.0	chr16	69310691	69310825	(21027520)	+	AluSx	SINE/Alu	150	284	(28)	1505544
12	9.2	0.0	4.0	chr16	69310826	69310850	(21027495)	+	(TCAA)n	Simple_repeat	1	25	(0)	1505545
304	28.1	7.5	4.3	chr16	69310883	69311023	(21027322)	C	MIRb	SINE/MIR	(10)	258	113	1505546
343	26.4	5.5	4.9	chr16	69522883	69523038	(20815307)	C	MLT1M	LTR/ERVL-MaLR	(362)	180	35	1505990
408	15.9	1.2	2.4	chr16	69554493	69554576	(20783769)	+	MLT1J	LTR/ERVL-MaLR	2	84	(526)	1506083
561	22.8	19.9	3.7	chr16	69554636	69554885	(20783460)	+	MLT1J	LTR/ERVL-MaLR	107	401	(111)	1506083
2171	11.0	8.0	2.9	chr16	69554886	69555230	(20783115)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1506084
2272	7.4	2.4	0.3	chr16	69727276	69727559	(20610786)	+	AluSx1	SINE/Alu	1	290	(22)	1506425
2139	11.7	0.3	3.1	chr16	69848160	69848476	(20489869)	+	AluSp	SINE/Alu	2	309	(4)	1506727
950	20.2	0.0	0.0	chr16	69848491	69848658	(20489687)	+	FRAM	SINE/Alu	1	168	(8)	1506728
196	28.9	5.0	12.3	chr16	70288499	70288565	(20049780)	+	L2c	LINE/L2	3258	3317	(70)	1507627
2484	7.3	0.0	0.0	chr16	70288566	70288866	(20049479)	C	AluSx	SINE/Alu	(11)	301	1	1507628
196	28.9	5.0	12.3	chr16	70288867	70288928	(20049417)	+	L2c	LINE/L2	3318	3377	(10)	1507627
18	0.0	0.0	0.0	chr16	70382052	70382071	(19956274)	+	(T)n	Simple_repeat	1	20	(0)	1507865
238	14.2	0.6	5.9	chr16	70644696	70645219	(19693126)	+	GA-rich	Low_complexity	1	527	(0)	1508444
636	2.7	0.0	0.0	chr16	70779036	70779109	(19559236)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	1508603
18	7.7	0.0	0.0	chr16	71425636	71425663	(18912682)	+	(AAAT)n	Simple_repeat	1	28	(0)	1509671
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
375	30.1	3.1	0.8	chr16	71484168	71484291	(18854054)	+	L2b	LINE/L2	3228	3354	(21)	1509763
2418	7.8	0.0	0.0	chr16	71565158	71565453	(18772892)	C	AluSg	SINE/Alu	(14)	296	1	1509920
2988	0.3	0.0	0.0	chr16	72009222	72009535	(18328810)	+	AluYb8	SINE/Alu	1	314	(4)	1510822
61	0.0	0.0	0.0	chr16	72931405	72931456	(17406889)	+	(AC)n	Simple_repeat	1	52	(0)	1512164
16	0.0	0.0	0.0	chr16	72931567	72931584	(17406761)	+	(A)n	Simple_repeat	1	18	(0)	1512165
18	0.0	0.0	0.0	chr16	73070711	73070730	(17267615)	+	(TC)n	Simple_repeat	1	20	(0)	1512351
21	0.0	0.0	0.0	chr16	73070916	73070938	(17267407)	+	(GC)n	Simple_repeat	1	23	(0)	1512352
940	12.3	0.0	2.9	chr16	73095086	73095223	(17243122)	C	FLAM_C	SINE/Alu	(8)	135	2	1512404
13	18.9	2.8	0.0	chr16	74607177	74607212	(15731133)	+	(GCCCC)n	Simple_repeat	1	37	(0)	1515038
192	39.2	0.0	4.7	chr16	74750641	74750747	(15587598)	C	MIRb	SINE/MIR	(115)	153	52	1515365
1819	15.0	0.7	3.9	chr16	74750749	74750761	(15587584)	C	AluJr4	SINE/Alu	(16)	296	287	1515366
34	0.0	0.0	0.0	chr16	74750762	74750790	(15587555)	+	(TG)n	Simple_repeat	1	29	(0)	1515367
1819	15.0	0.7	3.9	chr16	74750791	74751082	(15587263)	C	AluJr4	SINE/Alu	(26)	286	1	1515366
12	26.5	5.0	1.6	chr16	74985009	74985068	(15353277)	+	(CGC)n	Simple_repeat	1	63	(0)	1515869
34	24.6	0.0	2.3	chr16	75234052	75234138	(15104207)	+	(CA)n	Simple_repeat	1	87	(0)	1516365
44	0.0	0.0	0.0	chr16	75234165	75234202	(15104143)	+	(AC)n	Simple_repeat	1	38	(0)	1516366
2437	7.6	0.3	1.0	chr16	75445896	75446199	(14892146)	+	AluSg4	SINE/Alu	1	302	(8)	1516814
2246	11.0	1.9	0.0	chr16	75484569	75484869	(14853476)	+	AluSz	SINE/Alu	2	308	(4)	1516894
278	30.0	5.7	2.0	chr16	75484885	75484986	(14853359)	C	MER91A	DNA/hAT-Tip100	(1)	195	90	1516895
781	13.0	4.7	0.0	chr16	75648731	75648853	(14689492)	C	FLAM_C	SINE/Alu	(14)	129	1	1517226
1669	16.8	0.3	2.3	chr16	75648862	75649165	(14689180)	C	AluJr	SINE/Alu	(13)	299	2	1517227
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
13	8.8	0.0	3.9	chr16	77788753	77788778	(12549567)	+	(CGG)n	Simple_repeat	1	26	(0)	1520488
378	30.8	1.6	0.0	chr16	78002861	78002980	(12335365)	+	MamRep4096	DNA/hAT-Tip100	255	376	(50)	1520932
216	36.0	2.1	1.4	chr16	78291560	78291700	(12046645)	+	MER131	DNA?	59	200	(15)	1521463
535	13.8	4.2	3.2	chr16	78292056	78292149	(12046196)	C	AluSx3	SINE/Alu	(2)	309	215	1521464
34	31.2	2.2	1.5	chr16	79653928	79654061	(10684284)	+	(TG)n	Simple_repeat	1	137	(0)	1523921
15	21.7	6.0	1.9	chr16	79654163	79654212	(10684133)	+	(GT)n	Simple_repeat	1	53	(0)	1523922
158	40.3	0.1	0.1	chr16	79786429	79787076	(10551269)	+	(CCA)n	Simple_repeat	1	649	(0)	1524150
109	27.8	1.2	3.9	chr16	80171158	80171559	(10166786)	+	(CACCAT)n	Simple_repeat	1	391	(0)	1524841
47	2.2	0.0	0.0	chr16	80570009	80570055	(9768290)	+	(TTCC)n	Simple_repeat	1	47	(0)	1525525
489	25.5	14.5	0.9	chr16	80837948	80838162	(9500183)	C	L2a	LINE/L2	(2)	3424	3129	1525971
132	29.3	0.0	1.1	chr16	81173256	81173637	(9164708)	+	(TG)n	Simple_repeat	1	382	(0)	1526670
487	32.2	4.2	3.3	chr16	81173651	81173890	(9164455)	+	MIRb	SINE/MIR	20	260	(8)	1526671
1749	26.9	5.8	0.6	chr16	81406991	81407611	(8930734)	C	MER20B	DNA/hAT-Charlie	(41)	742	88	1527182
254	29.5	0.0	1.3	chr16	81746341	81746419	(8591926)	+	L1M6	LINE/L1	440	517	(5979)	1527925
425	25.5	2.9	0.0	chr16	83957073	83957174	(6381171)	C	MIR	SINE/MIR	(50)	212	108	1531925
1130	26.1	4.5	4.3	chr16	84423419	84423815	(5914530)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	51	1532807
374	29.7	12.8	0.0	chr16	84820218	84820405	(5517940)	C	MIRb	SINE/MIR	(23)	245	20	1533636
64	6.8	0.0	0.0	chr16	85150657	85150733	(5187612)	+	(TG)n	Simple_repeat	1	77	(0)	1534286
50	33.5	1.8	1.3	chr16	85245870	85246089	(5092256)	+	(TG)n	Simple_repeat	1	224	(0)	1534483
140	15.2	2.7	2.9	chr16	85246201	85246501	(5091844)	+	(AC)n	Simple_repeat	1	309	(0)	1534484
35	42.4	0.5	0.5	chr16	85514880	85515081	(4823264)	+	(TGTG)n	Simple_repeat	1	203	(0)	1534987
264	11.0	7.2	1.5	chr16	85572020	85572574	(4765771)	+	(AC)n	Simple_repeat	1	595	(0)	1535081
15	10.2	9.1	2.1	chr16	85799767	85799810	(4538535)	+	(GGCCG)n	Simple_repeat	1	48	(0)	1535469
335	17.4	0.0	0.0	chr16	85823313	85823904	(4514441)	+	(TCATCA)n	Simple_repeat	1	592	(0)	1535513
365	29.1	0.9	1.8	chr16	85823905	85824016	(4514329)	+	L2a	LINE/L2	3309	3419	(7)	1535514
257	23.7	0.3	0.2	chr16	86393781	86394346	(3943999)	+	(TCATCA)n	Simple_repeat	1	568	(0)	1536570
288	19.4	2.9	0.5	chr16	86464070	86464693	(3873652)	+	(GTGATG)n	Simple_repeat	1	642	(0)	1536715
106	25.1	0.7	1.1	chr16	86799382	86799654	(3538691)	+	(CAT)n	Simple_repeat	1	275	(0)	1537262
219	24.6	1.6	2.7	chr16	86801994	86802077	(3536268)	+	MIRb	SINE/MIR	178	261	(1)	1537265
153	22.4	1.1	1.4	chr16	86802078	86802436	(3535909)	+	(GAT)n	Simple_repeat	1	363	(0)	1537267
296	14.8	7.1	3.2	chr16	86932146	86932981	(3405364)	+	(AGGTGTG)n	Simple_repeat	1	895	(0)	1537495
303	21.3	2.9	0.3	chr16	86951044	86951740	(3386605)	+	(ATCACC)n	Simple_repeat	1	717	(0)	1537529
783	26.2	10.3	2.0	chr16	87316714	87317005	(3021340)	+	MLT1K	LTR/ERVL-MaLR	271	589	(6)	1538229
13	4.7	0.0	4.2	chr16	87317392	87317415	(3020930)	+	(CGCC)n	Simple_repeat	1	24	(0)	1538231
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
13	4.1	3.7	3.6	chr16	87388506	87388532	(2949813)	+	(AGAGG)n	Simple_repeat	1	28	(0)	1538349
26	21.1	1.5	1.5	chr16	87392347	87392413	(2945932)	+	(CGC)n	Simple_repeat	1	68	(0)	1538356
491	29.9	8.4	12.3	chr16	87580664	87580891	(2757454)	+	Kanga2_a	DNA/TcMar-Tc2	439	684	(204)	1538713
772	27.1	8.5	0.3	chr16	87580988	87581291	(2757054)	C	MLT1J2	LTR/ERVL-MaLR	(117)	331	1	1538716
351	24.8	0.6	0.1	chr16	87597148	87597945	(2740400)	+	(ATCATC)n	Simple_repeat	1	803	(0)	1538752
1673	12.5	3.7	6.2	chr16	87766142	87766446	(2571899)	+	AluJr	SINE/Alu	1	297	(15)	1539015
2084	9.6	3.9	0.0	chr16	87793555	87793826	(2544519)	+	AluSp	SINE/Alu	1	283	(30)	1539082
28	3.0	0.0	2.8	chr16	87793827	87793862	(2544483)	+	(AAACA)n	Simple_repeat	1	36	(0)	1539083
826	25.6	4.4	5.1	chr16	87793863	87793943	(2544402)	+	L1MEf	LINE/L1	1868	1945	(4255)	1539081
1532	12.4	17.1	0.0	chr16	87793972	87794213	(2544132)	+	AluSz	SINE/Alu	5	296	(16)	1539084
13	7.8	3.5	3.3	chr16	87807261	87807289	(2531056)	+	(GGAG)n	Simple_repeat	1	30	(0)	1539109
612	21.5	2.0	0.1	chr16	88421999	88423330	(1915015)	+	(GGAT)n	Simple_repeat	1	1359	(0)	1539955
25	16.6	0.0	0.0	chr16	88443416	88443463	(1894882)	+	(ACGC)n	Simple_repeat	1	48	(0)	1539966
27	20.2	0.0	3.0	chr16	88570585	88570651	(1767694)	+	(GGC)n	Simple_repeat	1	67	(0)	1540148
12	21.7	0.0	4.9	chr16	88662960	88663000	(1675345)	+	(CCCGG)n	Simple_repeat	1	41	(0)	1540288
11	9.1	2.3	11.1	chr16	88663355	88663398	(1674947)	+	(GGCGTC)n	Simple_repeat	1	45	(0)	1540289
286	24.2	0.0	0.0	chr16	88812033	88812098	(1526247)	C	Kanga1d	DNA/TcMar-Tc2	(0)	609	544	1540480
2318	7.3	0.0	0.0	chr16	88812736	88813024	(1525321)	C	AluY	SINE/Alu	(22)	289	1	1540481
2139	10.8	0.0	0.0	chr16	89237578	89237854	(1100491)	+	AluSz	SINE/Alu	16	292	(20)	1540960
2163	21.4	19.7	0.6	chr16	89237855	89238039	(1100306)	+	L1MEf	LINE/L1	2554	2781	(3763)	1540956
2134	13.0	0.3	0.0	chr16	89238046	89238346	(1099999)	+	AluSq2	SINE/Alu	5	306	(7)	1540961
2486	6.2	0.7	0.3	chr16	89240355	89240659	(1097686)	+	AluY	SINE/Alu	1	306	(5)	1540966
2049	9.9	0.0	3.8	chr16	89240660	89240833	(1097512)	+	AluSz	SINE/Alu	117	281	(31)	1540965
449	34.6	8.4	7.2	chr16	89240834	89240911	(1097434)	+	L1MEf	LINE/L1	5357	5425	(1119)	1540956
25	23.9	1.7	0.0	chr16	89489211	89489268	(849077)	+	(AC)n	Simple_repeat	1	59	(0)	1541346
11	16.9	2.9	2.8	chr16	89489367	89489401	(848944)	+	(CCGCCA)n	Simple_repeat	1	36	(0)	1541347
964	20.5	3.9	1.4	chr16	89516914	89517136	(821209)	C	Tigger2a	DNA/TcMar-Tigger	(205)	229	1	1541412
2228	12.2	0.0	0.3	chr16	89517615	89517918	(820427)	C	AluY	SINE/Alu	(8)	303	1	1541413
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
12	22.0	2.7	0.0	chr16	89701916	89701952	(636393)	+	G-rich	Low_complexity	1	38	(0)	1541697
2532	6.2	0.0	0.0	chr16	89705751	89706054	(632291)	C	AluY	SINE/Alu	(7)	304	1	1541705
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
1314	25.3	5.5	4.6	chr16	89996170	89996604	(341741)	+	L1MB7	LINE/L1	5731	6169	(15)	1542217
302	23.0	18.0	0.0	chr16	90022365	90022464	(315881)	C	L2a	LINE/L2	(2)	3424	3303	1542246
336	26.6	0.3	2.1	chr17	343917	344843	(82912598)	+	(CAT)n	Simple_repeat	1	930	(0)	1545014
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
2531	5.0	0.0	0.0	chr17	963796	964094	(82293347)	+	AluY	SINE/Alu	1	299	(12)	1546130
1623	11.1	5.9	6.2	chr17	1259671	1259976	(81997465)	+	AluY	SINE/Alu	2	306	(5)	1546710
415	28.9	1.6	0.0	chr17	1293869	1293989	(81963452)	+	MIRb	SINE/MIR	118	240	(28)	1546787
18	20.0	0.0	0.0	chr17	1293991	1294030	(81963411)	+	(ATC)n	Simple_repeat	1	40	(0)	1546788
2453	14.6	6.7	0.5	chr17	1369700	1370119	(81887322)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1971	1546958
2273	6.7	0.3	1.8	chr17	1370120	1370430	(81887011)	C	AluY	SINE/Alu	(0)	311	1	1546959
12	7.4	0.0	11.1	chr17	1399740	1399775	(81857666)	+	(CCTCCC)n	Simple_repeat	1	36	(0)	1547030
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
2253	7.7	4.4	0.0	chr17	1462997	1463281	(81794160)	C	AluSx	SINE/Alu	(14)	298	1	1547192
1252	26.2	6.8	4.5	chr17	1463282	1463812	(81793629)	+	MLT1K	LTR/ERVL-MaLR	34	577	(18)	1547193
2353	7.4	0.0	1.6	chr17	1517247	1517557	(81739884)	+	AluSz	SINE/Alu	1	306	(6)	1547280
13	21.1	2.6	0.0	chr17	1628733	1628770	(81628671)	+	(GCGCCC)n	Simple_repeat	1	39	(0)	1547494
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
17	19.6	0.0	5.8	chr17	2400961	2401012	(80856429)	+	(CTCC)n	Simple_repeat	1	52	(0)	1549024
2430	7.3	0.3	0.0	chr17	2785900	2786200	(80471241)	C	AluSq	SINE/Alu	(11)	302	1	1549945
353	30.1	5.5	0.0	chr17	2786212	2786314	(80471127)	C	MIR3	SINE/MIR	(68)	140	32	1549946
763	26.4	4.8	4.0	chr17	3049536	3049784	(80207657)	C	ORSL-2a	DNA/hAT-Tip100	(84)	258	8	1550499
22	5.6	8.1	0.0	chr17	3888906	3888942	(79368499)	+	(GT)n	Simple_repeat	1	40	(0)	1551943
529	34.4	3.7	0.8	chr17	3893748	3894011	(79363430)	+	L2c	LINE/L2	2547	2818	(601)	1551952
476	25.7	13.4	0.4	chr17	3935302	3935528	(79321913)	+	MLT1K	LTR/ERVL-MaLR	1	261	(334)	1552034
2431	7.2	0.0	0.0	chr17	3935536	3935826	(79321615)	C	AluSx1	SINE/Alu	(10)	302	12	1552035
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
14	21.1	0.0	2.5	chr17	4366693	4366753	(78890688)	+	(CCCG)n	Simple_repeat	1	59	(0)	1552867
2371	6.1	0.3	1.0	chr17	4704469	4704764	(78552677)	C	AluSx	SINE/Alu	(18)	294	1	1553577
12	16.1	0.0	3.3	chr17	4939771	4939800	(78317641)	+	(CCCTT)n	Simple_repeat	1	30	(0)	1554104
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
14	12.8	2.6	5.1	chr17	4949608	4949645	(78307796)	+	G-rich	Low_complexity	1	39	(0)	1554114
11	30.5	0.0	2.0	chr17	4949901	4949950	(78307491)	+	(CGCCCCC)n	Simple_repeat	1	50	(0)	1554115
22	18.8	3.5	9.2	chr17	4949989	4950104	(78307337)	+	G-rich	Low_complexity	1	120	(0)	1554116
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
697	26.4	3.0	0.8	chr17	7174610	7176778	(76080663)	+	(CA)n	Simple_repeat	1	2233	(0)	1558389
29	0.0	0.0	0.0	chr17	7176793	7176817	(76080624)	+	(CA)n	Simple_repeat	1	25	(0)	1558389
35	0.0	2.8	0.0	chr17	7176937	7176972	(76080469)	+	(CCCCAG)n	Simple_repeat	1	37	(0)	1558390
12	21.8	2.7	0.0	chr17	7251753	7251789	(76005652)	+	(GGCAGC)n	Simple_repeat	1	38	(0)	1558496
13	23.3	3.9	1.9	chr17	7479350	7479401	(75778040)	+	G-rich	Low_complexity	1	54	(0)	1558907
13	23.5	0.0	0.0	chr17	7483961	7483995	(75773446)	+	(CCGCC)n	Simple_repeat	1	35	(0)	1558911
31	28.2	2.5	1.6	chr17	7561967	7562077	(75695364)	+	(GGC)n	Simple_repeat	1	145	(0)	1559082
13	20.8	0.0	0.0	chr17	7562078	7562110	(75695331)	+	(GCGGC)n	Simple_repeat	1	33	(0)	1559083
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
271	31.0	5.8	0.0	chr17	8041881	8041993	(75215448)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	423	1560001
503	32.2	3.6	3.6	chr17	8041995	8042242	(75215199)	C	MLT1O	LTR/ERVL-MaLR	(252)	290	43	1560001
11977	27.9	2.3	1.6	chr17	8058796	8061901	(75195540)	+	HERVK-int	LTR/ERVK	1552	4676	(2860)	1560027
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
691	0.0	0.0	0.0	chr17	8139452	8139525	(75117916)	C	tRNA-Thr-ACY	tRNA	(3)	74	1	1560172
670	0.0	0.0	0.0	chr17	8186358	8186429	(75071012)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1560263
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
4256	16.7	4.9	1.3	chr17	8199888	8200407	(75057034)	+	MER50C	LTR/ERV1	1	548	(234)	1560296
2535	6.0	0.0	1.3	chr17	8200408	8200721	(75056720)	+	AluYj4	SINE/Alu	2	311	(0)	1560297
226	27.4	0.0	0.0	chr17	8221309	8221359	(75036082)	+	MIRc	SINE/MIR	103	153	(115)	1560358
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
4355	13.6	9.3	2.1	chr17	9416228	9416374	(73841067)	+	LTR8B	LTR/ERV1	1	147	(673)	1562663
2370	8.9	0.0	0.0	chr17	9416375	9416666	(73840775)	C	AluSg7	SINE/Alu	(17)	292	1	1562664
4355	13.6	9.3	2.1	chr17	9416667	9417278	(73840163)	+	LTR8B	LTR/ERV1	148	820	(0)	1562663
135	25.3	0.0	0.6	chr17	10126319	10126642	(73130799)	+	(CA)n	Simple_repeat	1	324	(0)	1564081
235	11.4	0.0	0.0	chr17	10737449	10737483	(72519958)	C	U2	snRNA	(153)	35	1	1565167
222	20.0	0.0	0.0	chr17	11997717	11997761	(71259680)	C	MIRb	SINE/MIR	(14)	254	210	1567386
1627	18.0	4.7	1.2	chr17	13421030	13421361	(69836080)	C	Tigger3a	DNA/TcMar-Tigger	(3)	345	2	1569767
1895	30.5	9.7	4.8	chr17	15288692	15289289	(67968152)	+	Charlie25	DNA/hAT-Charlie	331	986	(1538)	1572808
834	28.0	17.3	1.2	chr17	15289290	15289632	(67967809)	+	MLT1I	LTR/ERVL-MaLR	1	410	(1)	1572809
1895	30.5	9.7	4.8	chr17	15289633	15290023	(67967418)	+	Charlie25	DNA/hAT-Charlie	987	1370	(1154)	1572808
1320	27.1	7.7	3.9	chr17	15398579	15399065	(67858376)	C	HAL1	LINE/L1	(2000)	507	1	1572975
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
15	22.1	0.0	5.7	chr17	16381261	16381313	(66876128)	+	G-rich	Low_complexity	1	53	(0)	1574858
585	19.0	2.0	0.0	chr17	16418945	16419044	(66838397)	+	AluSz6	SINE/Alu	197	298	(14)	1574952
345	31.6	14.9	0.6	chr17	16438620	16438801	(66818640)	C	MIRc	SINE/MIR	(7)	261	56	1574991
2175	8.4	0.0	0.0	chr17	16453009	16453281	(66804160)	+	AluSx4	SINE/Alu	1	273	(37)	1575011
43	10.0	0.0	0.0	chr17	16453298	16453363	(66804078)	+	(ACACAC)n	Simple_repeat	1	66	(0)	1575012
222	32.1	7.7	2.3	chr17	16453476	16453561	(66803880)	+	MIRc	SINE/MIR	119	209	(59)	1575013
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
21	29.5	0.0	5.7	chr17	17477089	17477193	(65780248)	+	(GCCGCC)n	Simple_repeat	1	105	(0)	1576739
193	12.6	9.2	0.3	chr17	17693893	17693939	(65563502)	+	MIR	SINE/MIR	32	82	(186)	1577178
558	23.5	4.3	0.0	chr17	17750083	17750214	(65507227)	C	MLT1J2	LTR/ERVL-MaLR	(287)	161	24	1577279
406	29.8	3.2	3.2	chr17	17750257	17750412	(65507029)	C	MIRb	SINE/MIR	(3)	265	110	1577280
245	25.9	1.2	4.7	chr17	17752872	17752956	(65504485)	+	L2b	LINE/L2	3287	3368	(7)	1577285
189	31.9	2.8	0.0	chr17	18982138	18982206	(64275235)	+	MIR3	SINE/MIR	59	129	(79)	1579546
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
290	26.2	5.0	1.8	chr17	19388329	19388442	(63868999)	+	L2b	LINE/L2	3267	3412	(14)	1580508
1514	13.7	8.9	2.3	chr17	19388487	19388748	(63868693)	C	AluJr	SINE/Alu	(30)	282	2	1580509
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
13	17.4	0.0	2.9	chr17	19648298	19648331	(63609110)	+	GA-rich	Low_complexity	1	34	(0)	1581022
2238	10.2	0.0	0.0	chr17	21040888	21041182	(62216259)	C	AluSg	SINE/Alu	(15)	295	1	1583512
11	12.1	2.3	9.1	chr17	21213927	21213969	(62043472)	+	(CCCGGAT)n	Simple_repeat	1	44	(0)	1583854
12	13.3	9.3	2.1	chr17	27479243	27479285	(55778156)	+	(TCTGTGC)n	Simple_repeat	1	47	(0)	1586872
348	33.0	11.8	4.8	chr17	27529185	27529537	(55727904)	C	L1ME4a	LINE/L1	(205)	5919	5539	1586981
32	16.8	2.6	2.5	chr17	28042952	28043028	(55214413)	+	(CAC)n	Simple_repeat	1	79	(0)	1587978
18	22.8	3.6	0.0	chr17	28043066	28043121	(55214320)	+	(CAGCAG)n	Simple_repeat	1	58	(0)	1587979
12	15.8	0.0	3.3	chr17	28371698	28371727	(54885714)	+	(CCCAG)n	Simple_repeat	1	30	(0)	1588528
16	20.6	0.0	2.4	chr17	28662211	28662251	(54595190)	+	(GCG)n	Simple_repeat	1	41	(0)	1589101
32	12.1	3.9	3.8	chr17	28726266	28726342	(54531099)	+	(GCCCCC)n	Simple_repeat	1	80	(0)	1589203
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
16	21.9	3.3	0.0	chr17	28949300	28949355	(54308086)	+	G-rich	Low_complexity	1	57	(0)	1589654
13	22.8	3.6	3.5	chr17	29293104	29293158	(53964283)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	1590286
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
49	0.0	0.0	0.0	chr17	29744861	29744902	(53512539)	+	(GT)n	Simple_repeat	1	42	(0)	1591253
40	0.0	0.0	0.0	chr17	30327046	30327079	(52930362)	+	(AC)n	Simple_repeat	1	34	(0)	1592364
669	26.9	4.3	1.6	chr17	30336112	30336414	(52921027)	+	L1MC5a	LINE/L1	2463	2742	(35)	1592382
284	23.4	7.2	0.0	chr17	30336417	30336480	(52920961)	C	L2a	LINE/L2	(8)	3418	3350	1592383
531	23.0	3.1	1.6	chr17	30336489	30336616	(52920825)	C	MER91B	DNA/hAT-Tip100	(13)	177	48	1592384
187	30.2	4.5	0.0	chr17	30336658	30336720	(52920721)	C	L2a	LINE/L2	(50)	3337	3272	1592383
2210	12.4	1.9	0.0	chr17	30367969	30368274	(52889167)	+	AluSx	SINE/Alu	1	312	(0)	1592462
293	30.1	7.9	5.9	chr17	30534327	30534548	(52722893)	C	MIRb	SINE/MIR	(0)	268	42	1592725
33	12.7	0.0	0.0	chr17	30711029	30711088	(52546353)	+	(CT)n	Simple_repeat	1	60	(0)	1593101
21	6.7	0.0	0.0	chr17	31095479	31095510	(52161931)	+	(GGAAG)n	Simple_repeat	1	32	(0)	1593995
12	30.2	7.3	0.0	chr17	31095511	31095557	(52161884)	+	GA-rich	Low_complexity	4	88	(0)	1593996
1263	14.6	12.5	7.9	chr17	31689946	31690225	(51567216)	C	AluJb	SINE/Alu	(17)	295	1	1595097
2020	17.0	2.6	0.3	chr17	31690226	31690438	(51567003)	C	Tigger3b	DNA/TcMar-Tigger	(1015)	216	3	1595096
206	21.8	1.8	5.2	chr17	31690439	31690496	(51566945)	+	MIRb	SINE/MIR	156	211	(57)	1595098
16	23.0	0.0	7.7	chr17	32444481	32444545	(50812896)	+	(CGG)n	Simple_repeat	1	65	(0)	1596845
99	34.4	3.4	1.6	chr17	34566213	34566742	(48690699)	+	(TGGTGA)n	Simple_repeat	1	548	(0)	1600659
15	28.0	3.3	0.0	chr17	35373371	35373430	(47884011)	+	(CCACT)n	Simple_repeat	1	62	(0)	1602149
18	23.6	0.0	0.0	chr17	35587383	35587428	(47670013)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	1602448
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
210	24.7	7.7	0.0	chr17	36148808	36148934	(47108507)	C	MIR3	SINE/MIR	(10)	252	112	1603463
471	29.2	10.1	1.7	chr17	36149225	36149405	(47108036)	C	MIRb	SINE/MIR	(70)	198	1	1603464
20	13.4	0.0	4.4	chr17	36486832	36486876	(46770565)	+	(GGCG)n	Simple_repeat	1	45	(0)	1604032
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
252	29.0	2.0	2.7	chr17	36741265	36742240	(46515201)	+	(GT)n	Simple_repeat	1	996	(0)	1604547
14	23.9	0.0	2.2	chr17	37406615	37406660	(45850781)	+	(GCGCCAC)n	Simple_repeat	1	46	(0)	1605791
417	30.5	21.2	4.3	chr17	37566851	37567220	(45690221)	C	L2c	LINE/L2	(6)	3381	2933	1606100
227	38.7	4.7	4.3	chr17	37567248	37567525	(45689916)	C	L2c	LINE/L2	(807)	2612	2334	1606100
2167	11.3	0.7	1.0	chr17	37628936	37629227	(45628214)	+	AluSz	SINE/Alu	1	291	(21)	1606217
57	0.0	0.0	0.0	chr17	37629229	37629277	(45628164)	+	(AC)n	Simple_repeat	1	49	(0)	1606218
1808	19.5	0.7	0.0	chr17	37629392	37629699	(45627742)	+	AluJo	SINE/Alu	2	311	(1)	1606219
29	26.5	2.1	2.1	chr17	38465295	38465388	(44792053)	+	(TG)n	Simple_repeat	1	96	(0)	1607912
66	38.1	2.3	1.6	chr17	38467462	38467896	(44789545)	+	(TCCA)n	Simple_repeat	1	445	(0)	1607913
34	12.8	0.0	0.0	chr17	38601622	38601682	(44655759)	+	(AC)n	Simple_repeat	1	61	(0)	1608156
19	11.7	2.7	0.0	chr17	38606782	38606818	(44650623)	+	(CCAGAC)n	Simple_repeat	1	38	(0)	1608166
12	20.2	4.1	3.9	chr17	38730616	38730664	(44526777)	+	(CCCTCCT)n	Simple_repeat	1	51	(0)	1608457
698	1.3	0.0	0.0	chr17	38751778	38751854	(44505587)	C	tRNA-Asn-AAC	tRNA	(0)	77	1	1608489
18	16.8	6.4	0.0	chr17	38799428	38799474	(44457967)	+	(CGG)n	Simple_repeat	1	50	(0)	1608589
21	7.7	0.0	0.0	chr17	38869185	38869212	(44388229)	+	(T)n	Simple_repeat	1	28	(0)	1608778
628	4.1	0.0	0.0	chr17	38869291	38869363	(44388078)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608779
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
36	0.0	0.0	0.0	chr17	39236065	39236095	(44021346)	+	(TG)n	Simple_repeat	1	31	(0)	1609596
303	25.5	5.0	4.1	chr17	39236209	39236306	(44021135)	+	L2c	LINE/L2	3289	3387	(0)	1609597
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
16	23.6	0.0	0.0	chr17	40069008	40069042	(43188399)	+	(GT)n	Simple_repeat	1	35	(0)	1611299
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
861	15.0	8.0	1.2	chr17	40218981	40219142	(43038299)	+	MER5B	DNA/hAT-Charlie	1	174	(4)	1611610
12	17.0	8.3	1.9	chr17	40219255	40219302	(43038139)	+	(TCTCTCC)n	Simple_repeat	1	52	(0)	1611611
55	0.0	0.0	0.0	chr17	40533544	40533590	(42723851)	+	(TG)n	Simple_repeat	1	47	(0)	1612257
221	39.2	7.2	2.1	chr17	40827957	40828193	(42429248)	+	L2b	LINE/L2	2563	2812	(607)	1612718
289	31.6	7.6	7.2	chr17	41404032	41404266	(41853175)	+	MIRc	SINE/MIR	21	256	(12)	1613572
71	40.3	0.2	1.6	chr17	41567291	41567720	(41689721)	+	(TCCACC)n	Simple_repeat	1	431	(0)	1613833
551	15.5	4.8	2.0	chr17	41632551	41633816	(41623625)	+	(GT)n	Simple_repeat	1	1327	(0)	1613928
156	23.5	2.0	2.4	chr17	41651910	41652352	(41605089)	+	(AC)n	Simple_repeat	1	452	(0)	1613961
214	24.1	17.1	2.2	chr17	41738204	41738292	(41519149)	C	MIRc	SINE/MIR	(49)	219	115	1614171
187	25.0	0.0	0.0	chr17	41801851	41801898	(41455543)	C	MIR3	SINE/MIR	(60)	148	101	1614330
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
43	22.4	1.3	5.8	chr17	42121140	42121291	(41136150)	+	(GGCTGG)n	Simple_repeat	1	154	(0)	1614977
2354	5.5	2.0	0.7	chr17	42155250	42155542	(41101899)	C	AluSx	SINE/Alu	(15)	297	1	1615041
2293	7.4	2.0	3.6	chr17	42458284	42458592	(40798849)	+	AluSg	SINE/Alu	1	304	(6)	1615701
17	9.3	2.8	2.7	chr17	42458826	42458861	(40798580)	+	(GCGGGG)n	Simple_repeat	1	37	(0)	1615702
184	34.1	5.0	7.0	chr17	42518362	42518503	(40738938)	+	MamRTE1	LINE/RTE-BovB	3274	3412	(400)	1615808
2039	8.1	0.7	0.0	chr17	42561315	42561586	(40695855)	C	AluSp	SINE/Alu	(35)	278	5	1615898
197	16.9	7.1	2.6	chr17	42561692	42561760	(40695681)	+	MIR1_Amn	SINE/MIR	121	195	(73)	1615899
15	19.6	0.0	0.0	chr17	42682757	42682791	(40574650)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	1616147
16	32.7	1.0	4.8	chr17	42683084	42683187	(40574254)	+	G-rich	Low_complexity	1	105	(0)	1616148
13	22.1	0.0	0.0	chr17	42980635	42980666	(40276775)	+	GA-rich	Low_complexity	1	32	(0)	1616805
12	8.1	8.9	6.1	chr17	42981304	42981348	(40276093)	+	(GTGA)n	Simple_repeat	1	49	(0)	1616806
2084	12.8	2.0	0.0	chr17	43367221	43367518	(39889923)	+	AluSz	SINE/Alu	1	304	(8)	1617633
2175	10.4	0.3	0.0	chr17	43368407	43368693	(39888748)	C	AluSx3	SINE/Alu	(23)	288	1	1617636
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
274	29.1	3.4	2.3	chr17	43787664	43787751	(39469690)	+	L2	LINE/L2	2508	2596	(823)	1618607
18	10.5	0.0	0.0	chr17	43787770	43787800	(39469641)	+	(TTTG)n	Simple_repeat	1	31	(0)	1618608
186	38.4	4.3	0.9	chr17	43787931	43788043	(39469398)	+	L2	LINE/L2	2806	2922	(497)	1618607
2890	17.2	5.0	2.1	chr17	43788044	43788499	(39468942)	C	L1MDa	LINE/L1	(3253)	3284	2808	1618609
12	21.6	0.0	0.0	chr17	43906518	43906549	(39350892)	+	(TCCA)n	Simple_repeat	1	32	(0)	1618830
2090	7.9	5.9	0.3	chr17	43961534	43961823	(39295618)	C	AluSx	SINE/Alu	(5)	307	1	1618935
888	28.2	4.5	0.0	chr17	43962029	43962262	(39295179)	+	MLT1J	LTR/ERVL-MaLR	7	251	(261)	1618936
2284	7.4	0.3	0.0	chr17	43993179	43993476	(39263965)	+	AluY	SINE/Alu	1	299	(12)	1619022
1761	14.9	0.0	4.8	chr17	43993477	43993638	(39263803)	+	AluSz6	SINE/Alu	147	295	(17)	1619021
17	13.4	0.0	2.9	chr17	44066597	44066631	(39190810)	+	(GCG)n	Simple_repeat	1	35	(0)	1619168
476	18.6	1.0	2.9	chr17	44690379	44690483	(38566958)	C	MIRb	SINE/MIR	(36)	232	130	1620502
2100	9.2	5.8	0.3	chr17	44690485	44690620	(38566821)	+	AluSx	SINE/Alu	1	136	(176)	1620503
2336	9.4	0.3	0.0	chr17	44690621	44690927	(38566514)	+	AluSp	SINE/Alu	1	308	(5)	1620504
2100	9.2	5.8	0.3	chr17	44690928	44691085	(38566356)	+	AluSx	SINE/Alu	137	312	(0)	1620503
183	28.8	0.2	0.8	chr17	44982254	44982763	(38274678)	+	(TGG)n	Simple_repeat	1	511	(0)	1621106
48	22.8	1.8	0.0	chr17	45127720	45127831	(38129610)	+	(GT)n	Simple_repeat	1	114	(0)	1621401
1815	15.7	0.3	5.3	chr17	45129182	45129499	(38127942)	+	AluJo	SINE/Alu	11	312	(0)	1621406
218	32.4	0.9	9.0	chr17	45129500	45129554	(38127887)	+	MamRTE1	LINE/RTE-BovB	2458	2505	(1307)	1621404
428	29.5	8.5	4.3	chr17	45129555	45129706	(38127735)	+	MIRb	SINE/MIR	25	247	(21)	1621405
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
322	17.9	0.0	0.0	chr17	45176236	45176291	(38081150)	C	MIRc	SINE/MIR	(130)	138	83	1621493
1878	6.6	0.0	4.1	chr17	45176530	45176772	(38080669)	C	AluSc5	SINE/Alu	(0)	309	77	1621494
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
1909	14.5	4.5	0.0	chr17	45296243	45296538	(37960903)	+	AluJr4	SINE/Alu	1	310	(2)	1621741
188	31.7	0.0	0.0	chr17	45296891	45296950	(37960491)	C	L2a	LINE/L2	(3)	3423	3364	1621742
568	25.5	2.6	1.3	chr17	45296940	45297090	(37960351)	C	MIRb	SINE/MIR	(2)	266	114	1621743
1463	8.2	0.0	0.0	chr17	45585679	45585861	(37671580)	+	AluSp	SINE/Alu	115	297	(16)	1622333
654	21.6	1.4	0.7	chr17	45759845	45759984	(37497457)	+	MLT1J	LTR/ERVL-MaLR	71	211	(301)	1622731
1981	12.1	0.4	0.0	chr17	46052361	46052633	(37204808)	+	AluSx1	SINE/Alu	39	312	(0)	1623283
1749	15.7	1.6	7.2	chr17	46052663	46052993	(37204448)	+	AluJr4	SINE/Alu	1	312	(0)	1623284
1040	18.3	11.0	9.2	chr17	46096137	46096302	(37161139)	C	AluJr4	SINE/Alu	(11)	301	142	1623369
2280	8.0	0.3	1.7	chr17	46096303	46096619	(37160822)	C	AluSp	SINE/Alu	(0)	313	1	1623370
2473	6.6	0.3	0.0	chr17	46096629	46096916	(37160525)	C	AluY	SINE/Alu	(22)	289	1	1623371
696	25.0	6.4	0.0	chr17	46132449	46132624	(37124817)	+	MER5A	DNA/hAT-Charlie	2	189	(0)	1623431
1862	16.8	1.7	0.3	chr17	46132666	46132956	(37124485)	+	AluJb	SINE/Alu	1	295	(17)	1623432
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
113	5.0	2.7	0.7	chr17	46265247	46265394	(36992047)	+	(TTC)n	Simple_repeat	1	152	(0)	1623742
45	10.2	1.3	2.5	chr17	46265395	46265468	(36991973)	+	(TCC)n	Simple_repeat	2	75	(0)	1623743
2084	13.3	1.6	1.0	chr17	46265469	46265777	(36991664)	C	AluJb	SINE/Alu	(1)	311	1	1623744
2193	10.8	0.3	0.7	chr17	46277950	46278245	(36979196)	C	AluSx	SINE/Alu	(17)	295	1	1623764
430	27.8	10.0	9.6	chr17	46278246	46278392	(36979049)	C	HAL1ME	LINE/L1	(184)	2281	2123	1623762
2381	10.1	0.3	0.0	chr17	46278393	46278700	(36978741)	C	AluSg4	SINE/Alu	(0)	310	2	1623765
47	0.0	0.0	0.0	chr17	46836096	46836135	(36421306)	+	(GT)n	Simple_repeat	1	40	(0)	1624810
12	17.0	2.9	2.8	chr17	46923240	46923274	(36334167)	+	(GCGAG)n	Simple_repeat	1	36	(0)	1625000
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
12	31.3	0.0	0.0	chr17	47324096	47324142	(35933299)	+	G-rich	Low_complexity	1	47	(0)	1625797
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
15	14.2	10.7	1.6	chr17	47650121	47650176	(35607265)	+	(ACCCC)n	Simple_repeat	1	62	(0)	1626489
275	34.1	16.4	6.1	chr17	47831014	47831409	(35426032)	C	L2b	LINE/L2	(0)	3375	2931	1626803
247	25.0	0.0	1.5	chr17	47895335	47895399	(35362042)	C	MER5A1	DNA/hAT-Charlie	(0)	166	103	1626910
13	13.1	0.0	0.0	chr17	47896243	47896267	(35361174)	+	(CGG)n	Simple_repeat	1	25	(0)	1626911
229	29.3	0.0	0.0	chr17	48024509	48024566	(35232875)	+	MIRb	SINE/MIR	120	177	(91)	1627148
50	2.2	0.0	0.0	chr17	48252714	48252760	(35004681)	+	(GT)n	Simple_repeat	1	47	(0)	1627538
204	21.8	4.8	2.9	chr17	48299628	48299694	(34957747)	C	L2c	LINE/L2	(8)	3418	3345	1627607
194	35.2	11.5	3.6	chr17	48299667	48299890	(34957551)	C	L2c	LINE/L2	(93)	3294	3051	1627608
15	19.0	4.8	0.0	chr17	48541859	48541900	(34715541)	+	(TCCC)n	Simple_repeat	1	44	(0)	1628076
65	12.5	4.7	0.8	chr17	48555273	48555400	(34702041)	+	GA-rich	Low_complexity	1	134	(0)	1628090
26	20.3	0.0	0.0	chr17	48555970	48556020	(34701421)	+	(CA)n	Simple_repeat	1	51	(0)	1628092
29	22.1	2.9	0.0	chr17	48568599	48568667	(34688774)	+	(AC)n	Simple_repeat	1	71	(0)	1628104
19	18.0	5.8	0.0	chr17	48568728	48568779	(34688662)	+	GA-rich	Low_complexity	1	55	(0)	1628105
13	16.1	5.7	0.0	chr17	48612063	48612097	(34645344)	+	(GCCTG)n	Simple_repeat	1	37	(0)	1628142
55	0.0	0.0	0.0	chr17	48619224	48619270	(34638171)	+	(GT)n	Simple_repeat	1	47	(0)	1628154
218	30.9	12.6	0.0	chr17	48679359	48679455	(34577986)	+	L2a	LINE/L2	3299	3409	(17)	1628263
255	7.7	2.5	0.0	chr17	48869962	48870000	(34387441)	+	L1MD2	LINE/L1	6297	6336	(23)	1628688
375	19.6	12.4	9.0	chr17	48870126	48870340	(34387101)	C	MLT1D	LTR/ERVL-MaLR	(196)	271	59	1628689
49	0.0	2.0	2.0	chr17	48999924	48999973	(34257468)	+	(GT)n	Simple_repeat	1	51	(0)	1629011
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
2426	9.3	0.0	0.0	chr17	49193185	49193496	(34063945)	+	AluSx	SINE/Alu	1	312	(0)	1629401
290	26.3	2.6	6.6	chr17	49260777	49260898	(33996543)	C	MIR3	SINE/MIR	(1)	207	91	1629560
24	3.6	0.0	0.0	chr17	49260992	49261020	(33996421)	+	(GT)n	Simple_repeat	1	29	(0)	1629561
2316	7.5	0.0	0.0	chr17	49569710	49570014	(33687427)	C	AluSx	SINE/Alu	(7)	305	1	1630179
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
12	19.9	0.0	0.0	chr17	49707873	49707901	(33549540)	+	(CGG)n	Simple_repeat	1	29	(0)	1630436
12	31.4	4.5	0.0	chr17	49763533	49763599	(33493842)	+	(CCCTCAC)n	Simple_repeat	1	70	(0)	1630519
37	0.0	0.0	0.0	chr17	50169415	50169446	(33087995)	+	(AC)n	Simple_repeat	1	32	(0)	1631273
212	28.6	20.0	0.0	chr17	50178605	50178716	(33078725)	+	MIRb	SINE/MIR	50	189	(79)	1631288
18	18.7	0.0	0.0	chr17	50266027	50266058	(32991383)	+	(CA)n	Simple_repeat	1	32	(0)	1631432
11	35.9	4.2	1.0	chr17	50266141	50266235	(32991206)	+	(TCTCTC)n	Simple_repeat	1	99	(0)	1631433
451	31.5	21.6	1.7	chr17	50544648	50544884	(32712557)	+	L2b	LINE/L2	1903	2183	(1236)	1632008
991	33.9	11.3	2.3	chr17	50681088	50681818	(32575623)	+	L2a	LINE/L2	1282	2105	(1314)	1632236
2245	9.6	0.0	0.7	chr17	50762903	50763194	(32494247)	C	AluSc	SINE/Alu	(17)	292	3	1632388
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
34	0.0	0.0	0.0	chr17	51166116	51166144	(32091297)	+	(TG)n	Simple_repeat	1	29	(0)	1633281
2052	10.8	0.4	2.1	chr17	51457887	51458219	(31799222)	+	AluSx1	SINE/Alu	1	312	(0)	1633819
1113	17.0	3.7	1.9	chr17	51458220	51458446	(31798995)	+	MLT1A	LTR/ERVL-MaLR	159	407	(1)	1633818
280	32.0	0.8	3.9	chr17	51703430	51703556	(31553885)	+	MIRc	SINE/MIR	96	218	(50)	1634250
333	28.1	0.0	0.0	chr17	51703706	51703787	(31553654)	+	X2_LINE	LINE/CR1	982	1063	(345)	1634251
1706	23.6	4.5	1.6	chr17	56824021	56824450	(26432991)	+	MSTB2	LTR/ERVL-MaLR	15	457	(0)	1642051
1777	14.2	4.2	4.7	chr17	58018439	58018708	(25238733)	+	MER58B	DNA/hAT-Charlie	4	277	(64)	1644276
2373	9.9	0.0	0.0	chr17	58018709	58019010	(25238431)	+	AluSc8	SINE/Alu	2	303	(8)	1644277
486	19.0	0.0	0.0	chr17	58104985	58105062	(25152379)	C	Tigger5b	DNA/TcMar-Tigger	(394)	78	1	1644450
554	17.1	3.9	2.4	chr17	58105066	58105191	(25152250)	C	L1MD2	LINE/L1	(4221)	2179	2052	1644438
464	21.9	0.0	0.0	chr17	58105203	58105284	(25152157)	C	Tigger3c	DNA/TcMar-Tigger	(519)	83	2	1644451
6534	12.2	4.3	1.4	chr17	58105332	58105968	(25151473)	+	Tigger3b	DNA/TcMar-Tigger	99	773	(458)	1644452
265	32.6	12.4	3.2	chr17	58385748	58385824	(24871617)	+	MIR	SINE/MIR	47	144	(118)	1644911
1641	19.3	2.6	1.0	chr17	58385825	58386130	(24871311)	+	AluJr	SINE/Alu	1	311	(1)	1644912
265	32.6	12.4	3.2	chr17	58386131	58386146	(24871295)	+	MIR	SINE/MIR	145	159	(103)	1644911
2383	4.6	0.4	0.7	chr17	59209539	59209839	(24047602)	C	AluSq2	SINE/Alu	(0)	313	9	1646700
18	14.9	0.0	0.0	chr17	59209850	59209880	(24047561)	+	(T)n	Simple_repeat	1	31	(0)	1646701
5602	9.5	3.5	2.8	chr17	59290107	59290917	(23966524)	C	LTR5_Hs	LTR/ERVK	(151)	817	1	1646915
2277	9.4	0.3	1.6	chr17	59290952	59291258	(23966183)	C	AluSq2	SINE/Alu	(10)	303	1	1646916
805	22.8	9.3	4.1	chr17	59526557	59526799	(23730642)	C	MLT1K	LTR/ERVL-MaLR	(15)	580	324	1647442
2030	14.5	0.0	4.3	chr17	59560835	59561158	(23696283)	C	AluJb	SINE/Alu	(2)	310	1	1647526
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
12	19.9	0.0	0.0	chr17	59893146	59893174	(23364267)	+	(GGC)n	Simple_repeat	1	29	(0)	1648197
2363	27.8	12.0	4.6	chr17	60272511	60272963	(22984478)	+	L1MEc	LINE/L1	20	497	(5903)	1648902
2082	13.7	0.0	2.6	chr17	60272964	60273276	(22984165)	C	AluSz6	SINE/Alu	(7)	305	1	1648903
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
15	28.3	0.0	1.9	chr17	60600533	60600585	(22656856)	+	(CGC)n	Simple_repeat	1	53	(0)	1649630
559	27.6	3.0	3.0	chr17	61517904	61518138	(21739303)	+	UCON19	Unknown	75	309	(69)	1651183
1662	13.3	9.6	3.9	chr17	62470549	62470833	(20786608)	C	AluJr4	SINE/Alu	(9)	303	1	1653055
181	31.1	5.1	2.6	chr17	62470836	62470911	(20786530)	+	L2c	LINE/L2	3279	3356	(31)	1653056
12	11.6	6.9	0.0	chr17	62470916	62470944	(20786497)	+	G-rich	Low_complexity	1	31	(0)	1653057
668	25.6	11.9	0.5	chr17	62471001	62471215	(20786226)	C	MIRb	SINE/MIR	(22)	240	1	1653058
291	30.2	0.0	0.0	chr17	62792293	62792378	(20465063)	+	MIR	SINE/MIR	60	145	(117)	1653696
986	16.6	0.4	1.3	chr17	62792479	62794320	(20463121)	+	(CAC)n	Simple_repeat	1	1850	(0)	1653697
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
1724	12.8	3.6	5.5	chr17	64992570	64992881	(18264560)	+	AluJb	SINE/Alu	4	309	(3)	1657732
20	21.3	1.4	5.5	chr17	65056239	65056311	(18201130)	+	(CCCCGC)n	Simple_repeat	1	70	(0)	1657849
17	30.7	0.0	1.6	chr17	65056597	65056658	(18200783)	+	(GCC)n	Simple_repeat	1	62	(0)	1657850
13	20.4	5.6	3.5	chr17	65056651	65056704	(18200737)	+	(CGG)n	Simple_repeat	1	57	(0)	1657851
13	21.7	2.6	0.0	chr17	65560223	65560260	(17697181)	+	G-rich	Low_complexity	1	39	(0)	1658888
3869	16.3	3.0	2.4	chr17	65784788	65785542	(17471899)	C	L1MB7	LINE/L1	(0)	6184	5425	1659275
1339	17.1	2.7	11.9	chr17	65785545	65785915	(17471526)	C	L1MB7	LINE/L1	(908)	5238	4903	1659275
386	30.1	13.5	5.7	chr17	66200569	66200744	(17056697)	+	MIRb	SINE/MIR	59	250	(18)	1659822
258	26.7	1.3	0.0	chr17	66200765	66200839	(17056602)	+	L3	LINE/CR1	2801	2876	(1223)	1659823
15	18.6	0.0	0.0	chr17	66200840	66200860	(17056581)	+	(CATGTG)n	Simple_repeat	1	21	(0)	1659824
31	3.3	0.0	0.0	chr17	66200861	66200891	(17056550)	+	(AC)n	Simple_repeat	1	31	(0)	1659825
15	18.6	0.0	0.0	chr17	66200892	66200907	(17056534)	+	(CATGTG)n	Simple_repeat	4	19	(0)	1659826
40	31.3	2.5	1.2	chr17	66200906	66201063	(17056378)	+	(CA)n	Simple_repeat	1	162	(0)	1659827
314	31.0	10.2	4.3	chr17	66343517	66343819	(16913622)	C	L2b	LINE/L2	(610)	2809	2487	1660123
385	31.4	12.1	0.6	chr17	66509020	66509134	(16748307)	C	MLT1H2	LTR/ERVL-MaLR	(290)	199	63	1660382
2577	18.6	5.4	3.5	chr17	66509135	66509163	(16748278)	C	MLT2B4	LTR/ERVL	(0)	556	528	1660383
49	2.2	0.0	0.0	chr17	66509164	66509209	(16748232)	+	(GT)n	Simple_repeat	1	46	(0)	1660384
2577	18.6	5.4	3.5	chr17	66509210	66509724	(16747717)	C	MLT2B4	LTR/ERVL	(29)	527	2	1660383
274	31.0	17.4	1.8	chr17	66906506	66906722	(16350719)	C	L2c	LINE/L2	(17)	3370	3113	1661027
2314	10.5	0.0	0.3	chr17	67584833	67585136	(15672305)	+	AluSp	SINE/Alu	1	303	(10)	1662330
304	27.8	8.9	8.0	chr17	67585137	67585338	(15672103)	C	L2a	LINE/L2	(85)	3341	3091	1662329
20	13.2	5.6	3.5	chr17	67825998	67826051	(15431390)	+	(CGG)n	Simple_repeat	1	57	(0)	1662902
36	31.8	0.0	0.8	chr17	67826114	67826239	(15431202)	+	GA-rich	Low_complexity	1	126	(0)	1662903
12	5.5	0.0	0.0	chr17	67826262	67826280	(15431161)	+	(GAC)n	Simple_repeat	1	19	(0)	1662904
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
29	5.8	0.0	0.0	chr17	68205729	68205764	(15051677)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1663742
20	7.0	0.0	0.0	chr17	68205965	68205994	(15051447)	+	(GGC)n	Simple_repeat	1	30	(0)	1663743
15	14.8	2.4	4.8	chr17	68512499	68512539	(14744902)	+	(CGC)n	Simple_repeat	1	42	(0)	1664337
29	0.0	5.7	0.0	chr17	68698247	68698281	(14559160)	+	(TGTAA)n	Simple_repeat	1	37	(0)	1664660
843	23.4	3.8	1.0	chr17	69857586	69857792	(13399649)	C	L1MEg2	LINE/L1	(1199)	6255	6043	1666423
1617	27.6	6.1	6.6	chr17	69857804	69858708	(13398733)	C	L1MEg2	LINE/L1	(1979)	5475	4576	1666423
23	7.2	0.0	0.0	chr17	71181092	71181121	(12076320)	+	(AC)n	Simple_repeat	1	30	(0)	1668392
9979	10.7	4.8	1.7	chr17	71304472	71306539	(11950902)	+	L1PBa	LINE/L1	634	2910	(3953)	1668590
346	28.1	3.6	2.9	chr17	71441516	71441654	(11815787)	+	MLT1J	LTR/ERVL-MaLR	1	140	(372)	1668797
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
653	26.5	5.7	1.5	chr17	73427117	73427319	(9830122)	+	L1MC5a	LINE/L1	2063	2274	(503)	1672296
951	16.3	2.1	5.2	chr17	73427337	73427530	(9829911)	+	MER58A	DNA/hAT-Charlie	37	224	(0)	1672297
2687	14.0	3.7	1.5	chr17	73427570	73428152	(9829289)	+	L1MC	LINE/L1	4862	5454	(879)	1672298
237	32.8	0.1	0.3	chr17	74076136	74076852	(9180589)	+	(TGG)n	Simple_repeat	1	718	(0)	1673457
18	14.9	0.0	7.7	chr17	74203455	74203506	(9053935)	+	GA-rich	Low_complexity	1	52	(0)	1673684
1636	12.8	13.8	0.0	chr17	74209986	74210242	(9047199)	C	AluSg	SINE/Alu	(10)	300	3	1673695
295	27.8	8.7	2.5	chr17	74210435	74210552	(9046889)	+	MIRb	SINE/MIR	73	198	(70)	1673696
266	36.0	1.0	0.0	chr17	74301267	74301366	(8956075)	+	MER91B	DNA/hAT-Tip100	37	137	(53)	1673886
233	34.7	5.5	9.0	chr17	74457575	74457707	(8799734)	+	L2c	LINE/L2	3256	3383	(4)	1674191
58	30.2	1.8	9.6	chr17	74514143	74514815	(8742626)	+	(TGACAGG)n	Simple_repeat	1	685	(0)	1674300
11	17.3	7.7	0.0	chr17	74842433	74842471	(8414970)	+	(ACTCCAG)n	Simple_repeat	1	42	(0)	1674856
2160	10.1	3.9	0.3	chr17	74987029	74987326	(8270115)	C	AluSx	SINE/Alu	(2)	310	2	1675129
180	27.8	10.6	8.0	chr17	74987327	74987414	(8270027)	C	L2a	LINE/L2	(40)	3386	3286	1675128
642	0.0	0.0	0.0	chr17	75033906	75033978	(8223463)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1675212
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
389	10.8	8.4	0.0	chr17	75034855	75034919	(8222522)	C	tRNA-Arg-CGA	tRNA	(5)	71	1	1675214
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
2271	9.2	0.0	0.0	chr17	75037063	75037368	(8220073)	+	AluY	SINE/Alu	1	306	(5)	1675219
26	0.0	0.0	0.0	chr17	75183457	75183481	(8073960)	+	(TCT)n	Simple_repeat	1	25	(0)	1675546
2385	4.3	3.1	0.0	chr17	75183482	75183759	(8073682)	C	AluSc8	SINE/Alu	(24)	287	1	1675547
194	30.8	11.7	1.1	chr17	75262043	75262134	(7995307)	+	MIRc	SINE/MIR	3	105	(163)	1675711
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
682	26.5	9.2	9.0	chr17	75406183	75406593	(7850848)	C	L2c	LINE/L2	(46)	3341	2930	1676045
15	24.3	3.8	0.0	chr17	75456678	75456730	(7800711)	+	GA-rich	Low_complexity	1	55	(0)	1676192
16	0.0	0.0	0.0	chr17	75904771	75904787	(7352654)	+	(C)n	Simple_repeat	1	17	(0)	1676997
4073	14.7	4.6	2.1	chr17	75983539	75984239	(7273202)	C	LTR8A	LTR/ERV1	(0)	727	9	1677161
249	31.7	4.2	1.2	chr17	75988609	75988771	(7268670)	C	L1ME3G	LINE/L1	(250)	674	507	1677177
2301	7.8	0.3	0.7	chr17	75988776	75989070	(7268371)	C	AluSg4	SINE/Alu	(16)	294	1	1677178
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
15	23.2	0.0	2.1	chr17	76265790	76265836	(6991605)	+	(GCCGAGG)n	Simple_repeat	1	47	(0)	1677700
121	29.2	0.3	0.6	chr17	76277523	76277876	(6979565)	+	(CACA)n	Simple_repeat	1	355	(0)	1677712
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
2153	7.5	4.1	0.7	chr17	76729100	76729380	(6528061)	C	AluSx	SINE/Alu	(21)	291	1	1678623
190	27.0	8.7	0.0	chr17	76729447	76729509	(6527932)	+	L2a	LINE/L2	3353	3421	(5)	1678624
2164	13.6	0.0	0.0	chr17	76853688	76853988	(6403453)	C	AluSq2	SINE/Alu	(12)	301	1	1678898
2492	18.1	1.3	5.7	chr17	76853990	76854096	(6403345)	C	L1MB3	LINE/L1	(41)	6142	6035	1678899
1778	15.2	2.0	5.4	chr17	76854097	76854411	(6403030)	+	AluJo	SINE/Alu	1	304	(8)	1678900
1992	16.9	1.5	6.6	chr17	77031429	77031571	(6225870)	+	MLT1B	LTR/ERVL-MaLR	248	389	(1)	1679280
1852	22.7	8.2	2.2	chr17	77031572	77031948	(6225493)	+	MLT1F	LTR/ERVL-MaLR	146	548	(0)	1679279
299	31.2	6.1	10.7	chr17	77233707	77233997	(6023444)	+	MLT1J2	LTR/ERVL-MaLR	135	448	(0)	1679691
238	23.8	0.0	16.5	chr17	77234120	77234240	(6023201)	C	L2a	LINE/L2	(469)	2950	2850	1679690
360	28.8	0.9	0.8	chr17	77509083	77510098	(5747343)	+	(ATC)n	Simple_repeat	1	1025	(0)	1680149
183	35.5	4.8	2.1	chr17	77735064	77735204	(5522237)	+	MER5A	DNA/hAT-Charlie	18	162	(27)	1680551
206	27.1	0.2	0.2	chr17	77809785	77810280	(5447161)	+	(TGATGA)n	Simple_repeat	1	497	(0)	1680683
511	22.0	8.9	10.4	chr17	78176755	78176947	(5080494)	C	MER20	DNA/hAT-Charlie	(25)	194	5	1681327
53	0.0	0.0	0.0	chr17	78254749	78254793	(5002648)	+	(GT)n	Simple_repeat	1	45	(0)	1681498
102	18.5	2.8	0.0	chr17	78290011	78290224	(4967217)	+	(GT)n	Simple_repeat	1	220	(0)	1681578
14	12.7	0.0	0.0	chr17	78378668	78378693	(4878748)	+	(GGC)n	Simple_repeat	1	26	(0)	1681762
382	30.5	0.9	0.1	chr17	78477867	78478929	(4778512)	+	(ACC)n	Simple_repeat	1	1073	(0)	1681901
13	19.2	2.8	0.0	chr17	78843425	78843460	(4413981)	+	(AGAGGC)n	Simple_repeat	1	37	(0)	1682544
3776	16.7	1.3	2.0	chr17	78862568	78863226	(4394215)	C	L1PA16	LINE/L1	(21)	6145	5493	1682582
2402	10.6	0.0	0.0	chr17	78979469	78979779	(4277662)	+	AluSx	SINE/Alu	1	311	(1)	1682800
2138	10.2	0.3	0.3	chr17	79419845	79420127	(3837314)	+	AluSx	SINE/Alu	1	283	(29)	1683396
55	0.0	0.0	0.0	chr17	79420129	79420175	(3837266)	+	(AC)n	Simple_repeat	1	47	(0)	1683397
21	14.6	0.0	0.0	chr17	79796789	79796826	(3460615)	+	(GCC)n	Simple_repeat	1	38	(0)	1683951
17	15.9	0.0	0.0	chr17	80220323	80220357	(3037084)	+	(GGCTCG)n	Simple_repeat	1	35	(0)	1684680
16	21.4	0.0	8.6	chr17	80220366	80220435	(3037006)	+	(CCCGC)n	Simple_repeat	1	70	(0)	1684681
268	18.5	6.7	2.0	chr17	80511054	80511848	(2745593)	+	(CA)n	Simple_repeat	1	848	(0)	1685123
406	26.6	0.0	1.7	chr17	81472162	81472276	(1785165)	+	MLT1K	LTR/ERVL-MaLR	153	265	(330)	1686275
1045	15.6	2.3	0.6	chr17	81487511	81487683	(1769758)	C	AluJb	SINE/Alu	(18)	294	119	1686297
318	31.8	16.4	1.1	chr17	81665674	81665854	(1591587)	+	MIRb	SINE/MIR	45	258	(10)	1686612
235	25.3	14.6	0.0	chr17	81665925	81666070	(1591371)	+	L2	LINE/L2	113	283	(3136)	1686613
16	14.5	3.1	9.1	chr17	81917970	81917993	(1339448)	+	(GCGG)n	Simple_repeat	1	42	(24)	1686906
14	8.2	0.0	3.6	chr17	81917994	81918021	(1339420)	+	(GGCCG)n	Simple_repeat	1	28	(0)	1686907
16	14.5	3.1	9.1	chr17	81918022	81918033	(1339408)	+	(GCGG)n	Simple_repeat	43	66	(0)	1686906
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
11	14.8	4.9	4.7	chr17	82273465	82273505	(983936)	+	(CTCCGG)n	Simple_repeat	1	43	(0)	1687397
21	13.1	0.0	4.3	chr17	82273724	82273769	(983672)	+	(GGCGG)n	Simple_repeat	1	46	(0)	1687398
28	2.4	2.0	6.0	chr17	82281523	82281571	(975870)	+	(TGTGTGTTCA)n	Simple_repeat	1	50	(0)	1687415
2565	20.3	1.5	1.1	chr17	82338920	82339456	(917985)	+	MER41G	LTR/ERV1	347	885	(0)	1687504
13	0.0	0.0	0.0	chr17	82458441	82458457	(798984)	+	(GCC)n	Simple_repeat	1	17	(0)	1687667
664	0.0	0.0	0.0	chr17	82494721	82494792	(762649)	C	tRNA-Met-i	tRNA	(3)	72	1	1687730
29	18.7	0.0	4.1	chr17	82648451	82648523	(608918)	+	(CGTG)n	Simple_repeat	1	73	(0)	1688030
156	18.1	1.6	0.6	chr17	82648573	82648887	(608554)	+	G-rich	Low_complexity	1	320	(0)	1688031
2092	13.5	0.3	0.3	chr17	82762467	82762762	(494679)	+	AluSx1	SINE/Alu	1	296	(16)	1688215
1559	25.8	10.6	5.3	chr17	82762763	82762960	(494481)	C	L1ME2	LINE/L1	(568)	5596	5382	1688212
1372	28.4	7.8	0.0	chr17	82762957	82763418	(494023)	C	L1ME2	LINE/L1	(3388)	2758	2258	1688212
447	28.2	4.7	1.2	chr18	711298	711507	(79661778)	C	L1ME3C	LINE/L1	(47)	6195	5974	1690296
12	22.1	0.0	0.0	chr18	712651	712682	(79660603)	+	GA-rich	Low_complexity	1	32	(0)	1690298
2736	29.8	2.7	2.8	chr18	3296459	3297771	(77075514)	+	L1PB3	LINE/L1	3	1313	(5550)	1694111
630	23.4	7.3	0.7	chr18	3409134	3409287	(76963998)	+	AluJr4	SINE/Alu	138	302	(10)	1694342
2033	13.8	0.0	0.3	chr18	3409321	3409609	(76963676)	+	AluJb	SINE/Alu	2	289	(23)	1694343
326	26.2	7.5	5.9	chr18	3409640	3409809	(76963476)	+	HAL1ME	LINE/L1	2273	2445	(20)	1694344
24	17.3	0.0	0.0	chr18	3791511	3791551	(76581734)	+	(TG)n	Simple_repeat	1	41	(0)	1695059
306	31.5	13.8	5.6	chr18	5295087	5295338	(75077947)	C	L1M4b	LINE/L1	(6188)	679	404	1697043
44	0.0	2.4	0.0	chr18	5629410	5629450	(74743835)	+	(AC)n	Simple_repeat	1	42	(0)	1697496
90	32.7	0.0	0.7	chr18	6729310	6729597	(73643688)	+	(AC)n	Simple_repeat	1	288	(0)	1698977
29	0.0	0.0	0.0	chr18	8689578	8689602	(71683683)	+	(CA)n	Simple_repeat	1	25	(0)	1701778
1993	15.1	5.4	3.1	chr18	8933610	8934124	(71439161)	C	LTR8B	LTR/ERV1	(237)	583	1	1702113
250	31.7	0.0	0.0	chr18	9334063	9334122	(71039163)	C	MER5A	DNA/hAT-Charlie	(67)	122	63	1702840
448	10.8	11.7	0.0	chr18	9877074	9877156	(70496129)	+	LTR45C	LTR/ERV1	1	94	(445)	1703790
3282	11.8	5.8	1.0	chr18	9877166	9877678	(70495607)	+	LTR45C	LTR/ERV1	1	539	(0)	1703791
15	20.9	1.6	6.3	chr18	9914178	9914239	(70459046)	+	(GCCGCC)n	Simple_repeat	1	63	(0)	1703864
16025	12.1	6.5	0.7	chr18	12161400	12166726	(68206559)	C	L1MA2	LINE/L1	(0)	7723	2041	1706991
2437	1.8	0.0	0.0	chr18	12407288	12407568	(67965717)	C	AluY	SINE/Alu	(30)	281	1	1707389
2036	20.7	11.2	6.0	chr18	12407569	12407658	(67965627)	+	MER67C	LTR/ERV1	606	710	(1)	1707387
2221	10.6	6.9	2.3	chr18	12539158	12539504	(67833781)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1707630
322	30.8	13.6	5.1	chr18	12539505	12539570	(67833715)	C	L2a	LINE/L2	(77)	3349	3277	1707629
41	4.8	0.0	0.0	chr18	12539571	12539614	(67833671)	+	(AC)n	Simple_repeat	1	44	(0)	1707631
322	30.8	13.6	5.1	chr18	12539615	12539646	(67833639)	C	L2a	LINE/L2	(150)	3276	3233	1707629
2315	11.0	1.3	0.7	chr18	12539647	12539956	(67833329)	+	AluSx1	SINE/Alu	1	312	(0)	1707632
32	11.8	0.0	1.8	chr18	12658110	12658166	(67715119)	+	(CGCCC)n	Simple_repeat	1	57	(0)	1707865
14	24.6	1.4	6.9	chr18	12658378	12658448	(67714837)	+	(GCGG)n	Simple_repeat	1	72	(0)	1707866
17	0.0	0.0	0.0	chr18	12883871	12883889	(67489396)	+	(T)n	Simple_repeat	1	19	(0)	1708292
18	9.4	0.0	5.3	chr18	12883964	12884001	(67489284)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1708293
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
15	19.1	5.9	3.7	chr18	12884254	12884266	(67489019)	+	(GC)n	Simple_repeat	1	54	(0)	1708295
82	17.7	5.5	0.9	chr18	12990178	12990378	(67382907)	+	(GT)n	Simple_repeat	1	212	(0)	1708511
2100	13.2	0.3	2.5	chr18	22079429	22079747	(58293538)	C	AluSx	SINE/Alu	(0)	312	1	1713898
22	18.8	5.1	3.7	chr18	22169335	22169412	(58203873)	+	(CTCCC)n	Simple_repeat	1	82	(0)	1714086
33	0.0	0.0	0.0	chr18	22470312	22470339	(57902946)	+	(CA)n	Simple_repeat	1	28	(0)	1714607
187	36.9	3.0	2.3	chr18	22486432	22486564	(57886721)	+	MIRc	SINE/MIR	18	151	(117)	1714626
6690	12.9	6.2	5.6	chr18	22815807	22817076	(57556209)	C	MER52C	LTR/ERV1	(0)	1278	1	1715049
2366	9.6	0.0	3.1	chr18	23181204	23181526	(57191759)	+	AluSq2	SINE/Alu	1	313	(0)	1715764
2256	11.6	1.0	0.0	chr18	23412038	23412340	(56960945)	+	AluSz	SINE/Alu	1	306	(6)	1716143
16	13.7	0.0	0.0	chr18	23412468	23412492	(56960793)	+	(T)n	Simple_repeat	1	25	(0)	1716144
20	10.1	0.0	0.0	chr18	23437922	23437953	(56935332)	+	(GCA)n	Simple_repeat	1	32	(0)	1716196
13	9.7	0.0	0.0	chr18	23453296	23453317	(56919968)	+	(CGC)n	Simple_repeat	1	22	(0)	1716229
198	27.6	7.2	0.8	chr18	23740615	23740731	(56632554)	+	L3	LINE/CR1	3740	3864	(235)	1716793
2108	7.1	0.0	2.3	chr18	23740957	23741222	(56632063)	C	AluY	SINE/Alu	(15)	296	37	1716794
247	28.7	1.6	10.9	chr18	23964413	23964549	(56408736)	C	LTR91	LTR/ERVL	(44)	155	32	1717129
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
237	31.2	11.8	0.0	chr18	24427051	24427162	(55946123)	+	MIRc	SINE/MIR	26	152	(116)	1717930
383	28.5	12.8	1.5	chr18	24530360	24530561	(55842724)	+	MIRb	SINE/MIR	33	262	(0)	1718119
296	27.4	14.2	1.3	chr18	24530813	24530971	(55842314)	+	OldhAT1	DNA/hAT-Ac	1225	1407	(1441)	1718120
332	14.6	6.1	0.8	chr18	24735499	24736232	(55637053)	+	(TG)n	Simple_repeat	1	779	(0)	1718398
43	5.5	1.7	1.7	chr18	24840903	24840960	(55532325)	+	(GT)n	Simple_repeat	1	59	(0)	1718553
363	33.0	5.7	8.6	chr18	25329512	25329872	(55043413)	C	L2	LINE/L2	(359)	3060	2711	1719183
2440	9.2	0.0	0.7	chr18	25330160	25330463	(55042822)	C	AluSc	SINE/Alu	(7)	302	1	1719184
37	25.6	0.9	1.8	chr18	25351813	25351922	(55021363)	+	(GGC)n	Simple_repeat	1	111	(0)	1719215
27	10.9	2.0	1.9	chr18	25351924	25351974	(55021311)	+	(GAG)n	Simple_repeat	1	52	(0)	1719216
59	13.5	5.7	4.2	chr18	25352287	25352445	(55020840)	+	(GCC)n	Simple_repeat	1	168	(0)	1719217
320	30.5	2.2	3.8	chr18	26528611	26528794	(53844491)	+	L2-3_Crp	LINE/L2	717	897	(1199)	1721066
41	4.7	0.0	0.0	chr18	26778137	26778180	(53595105)	+	(AC)n	Simple_repeat	1	44	(0)	1721515
29	3.7	4.9	4.7	chr18	30985773	30985833	(49387452)	+	(TGTGTGCA)n	Simple_repeat	1	64	(0)	1727053
491	33.7	2.9	2.5	chr18	31011333	31011536	(49361749)	+	L3	LINE/CR1	1655	1859	(2240)	1727089
1552	9.1	0.5	1.0	chr18	31011712	31011909	(49361376)	+	AluSx3	SINE/Alu	2	198	(113)	1727090
280	27.6	11.8	0.7	chr18	33470494	33470628	(46902657)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	378	1730781
17	32.4	2.9	0.0	chr18	33578113	33578181	(46795104)	+	(GC)n	Simple_repeat	1	71	(0)	1730902
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
588	30.6	13.5	1.6	chr18	35610227	35610538	(44762747)	+	L2a	LINE/L2	3059	3413	(13)	1733582
194	21.8	19.4	2.2	chr18	36482701	36482789	(43890496)	+	L2c	LINE/L2	3279	3386	(1)	1734853
32	5.2	0.0	0.0	chr18	36482819	36482858	(43890427)	+	(AC)n	Simple_repeat	1	40	(0)	1734854
43	0.0	0.0	0.0	chr18	36482859	36482895	(43890390)	+	(AG)n	Simple_repeat	1	37	(0)	1734855
12	18.1	2.4	4.8	chr18	36828617	36828657	(43544628)	+	(CCT)n	Simple_repeat	1	42	(0)	1735268
2544	5.6	0.0	1.3	chr18	39799487	39799788	(40573497)	+	AluY	SINE/Alu	3	300	(11)	1739191
1697	17.6	1.2	5.1	chr18	39799789	39800030	(40573255)	C	MER61-int	LTR/ERV1	(4815)	402	161	1739189
223	25.7	15.8	1.9	chr18	44895540	44895642	(35477643)	C	MIR1_Amn	SINE/MIR	(108)	122	3	1746107
901	17.4	14.8	6.8	chr18	45756402	45756697	(34616588)	+	MER33	DNA/hAT-Charlie	1	324	(0)	1747382
12	11.1	3.2	3.1	chr18	45967194	45967224	(34406061)	+	(TGGCCT)n	Simple_repeat	1	32	(0)	1747710
368	35.5	14.0	5.4	chr18	46250354	46250491	(34122794)	+	L2b	LINE/L2	2490	2636	(783)	1748321
29	0.0	0.0	0.0	chr18	46250492	46250516	(34122769)	+	(AC)n	Simple_repeat	1	25	(0)	1748324
368	35.5	14.0	5.4	chr18	46250517	46250805	(34122480)	+	L2b	LINE/L2	2637	2959	(460)	1748321
1381	29.2	3.9	1.1	chr18	46324475	46324944	(34048341)	C	MLT1J	LTR/ERVL-MaLR	(28)	484	1	1748454
34	10.1	0.0	0.0	chr18	46516716	46516769	(33856516)	+	(TCA)n	Simple_repeat	1	54	(0)	1748785
2114	12.2	1.3	0.3	chr18	47175457	47175760	(33197525)	C	AluSx1	SINE/Alu	(5)	307	1	1749801
11	21.6	0.0	4.9	chr18	47251755	47251795	(33121490)	+	(GAGCGA)n	Simple_repeat	1	41	(0)	1749908
17	18.8	1.2	9.8	chr18	47749224	47749304	(32623981)	+	(CGCCCCG)n	Simple_repeat	1	82	(0)	1750733
187	29.2	9.7	4.4	chr18	47754553	47754620	(32618665)	+	Tigger19b	DNA/TcMar-Tigger	186	257	(293)	1750744
22	10.1	0.0	0.0	chr18	48023476	48023507	(32349778)	+	(TG)n	Simple_repeat	1	32	(0)	1751192
28	11.3	1.5	6.1	chr18	48539080	48539144	(31834141)	+	(CCTC)n	Simple_repeat	1	66	(0)	1752077
15	16.3	0.0	2.8	chr18	48676988	48677023	(31696262)	+	G-rich	Low_complexity	1	36	(0)	1752281
233	26.1	4.2	1.4	chr18	48901049	48901118	(31472167)	C	L2c	LINE/L2	(1)	3386	3315	1752629
218	20.0	0.0	2.2	chr18	48901124	48901169	(31472116)	+	L2a	LINE/L2	3369	3413	(13)	1752628
29	33.2	1.5	1.5	chr18	48901175	48901261	(31472024)	+	(GGAT)n	Simple_repeat	1	86	(0)	1752630
71	4.8	3.5	2.6	chr18	48901262	48901374	(31471911)	+	(TGGA)n	Simple_repeat	1	117	(0)	1752631
29	33.2	1.5	1.5	chr18	48901375	48901416	(31471869)	+	(GGAT)n	Simple_repeat	3	45	(0)	1752632
19	0.0	0.0	0.0	chr18	48923468	48923491	(31449794)	+	(GTT)n	Simple_repeat	1	24	(0)	1752681
53	5.3	0.0	0.0	chr18	49008620	49008678	(31364607)	+	(AC)n	Simple_repeat	1	59	(0)	1752827
165	25.1	2.2	2.0	chr18	49019546	49020039	(31353246)	+	(GT)n	Simple_repeat	1	505	(0)	1752844
17	8.9	0.0	0.0	chr18	49095448	49095471	(31277814)	+	(T)n	Simple_repeat	1	24	(0)	1752946
715	33.6	8.6	3.9	chr18	49141218	49141854	(31231431)	+	L2b	LINE/L2	2689	3358	(17)	1753017
2403	7.2	0.3	3.0	chr18	49141856	49142160	(31231125)	C	AluY	SINE/Alu	(14)	297	1	1753018
1701	18.9	4.9	0.0	chr18	49285415	49285742	(31087543)	+	Tigger3a	DNA/TcMar-Tigger	3	347	(1)	1753242
495	27.1	12.4	1.1	chr18	49285855	49286033	(31087252)	+	MER58A	DNA/hAT-Charlie	17	218	(6)	1753243
1779	12.8	0.3	7.3	chr18	49460833	49461145	(30912140)	+	AluSc	SINE/Alu	2	292	(17)	1753566
1337	23.4	11.8	3.2	chr18	49548305	49548532	(30824753)	C	L2a	LINE/L2	(0)	3426	3168	1753773
2159	13.8	2.6	0.0	chr18	49548533	49548836	(30824449)	+	AluSx1	SINE/Alu	1	312	(0)	1753774
10456	9.3	4.2	0.5	chr18	49777296	49779533	(30593752)	C	L1PBa	LINE/L1	(3754)	3108	634	1754192
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
1449	17.4	0.0	0.9	chr18	50356987	50357013	(30016272)	C	AluJb	SINE/Alu	(2)	310	285	1755000
46	0.0	0.0	0.0	chr18	50357014	50357052	(30016233)	+	(TG)n	Simple_repeat	1	39	(0)	1755001
1449	17.4	0.0	0.9	chr18	50357053	50357248	(30016037)	C	AluJb	SINE/Alu	(28)	284	89	1755000
234	34.4	15.5	1.9	chr18	50715868	50716128	(29657157)	+	L2c	LINE/L2	2929	3231	(156)	1755613
195	25.8	17.9	1.7	chr18	50716151	50716383	(29656902)	+	L2	LINE/L2	1902	2180	(1239)	1755614
253	29.6	3.0	0.0	chr18	50748446	50748543	(29624742)	C	LTR88b	LTR/Gypsy?	(733)	104	4	1755676
276	26.8	7.2	12.2	chr18	50836340	50836543	(29536742)	C	MLT1L	LTR/ERVL-MaLR	(1)	609	417	1755830
20	10.1	0.0	0.0	chr18	51196765	51196796	(29176489)	+	(CCG)n	Simple_repeat	1	32	(0)	1756515
297	30.4	9.1	7.1	chr18	54119783	54120051	(26253234)	+	LTR88c	LTR/Gypsy?	41	315	(547)	1760743
17	0.0	0.0	0.0	chr18	57899002	57899020	(22474265)	+	(GT)n	Simple_repeat	1	19	(0)	1766420
15	0.0	0.0	0.0	chr18	57899020	57899036	(22474249)	+	(GA)n	Simple_repeat	1	17	(0)	1766421
2091	13.2	0.3	0.3	chr18	57921517	57921818	(22451467)	+	AluSz	SINE/Alu	1	302	(10)	1766462
627	27.5	0.0	9.2	chr18	57921819	57921897	(22451388)	C	MER45A	DNA/hAT-Tip100	(116)	62	1	1766461
228	20.7	3.3	1.7	chr18	57921935	57921993	(22451292)	C	MIRb	SINE/MIR	(12)	256	197	1766463
422	19.4	15.2	2.9	chr18	57922000	57922137	(22451148)	C	MER39	LTR/ERV1	(19)	688	555	1766464
1080	17.7	0.0	0.0	chr18	57922138	57922312	(22450973)	+	AluJb	SINE/Alu	136	310	(2)	1766465
2246	10.2	0.3	4.6	chr18	58161007	58161329	(22211956)	C	AluSz	SINE/Alu	(2)	310	2	1766905
60	22.2	6.5	2.2	chr18	58781776	58781990	(21591295)	+	(TG)n	Simple_repeat	1	229	(0)	1767840
2078	14.1	0.0	1.6	chr18	58782229	58782533	(21590752)	+	AluJb	SINE/Alu	1	300	(12)	1767841
220	38.5	4.6	1.6	chr18	59381907	59382096	(20991189)	C	L2c	LINE/L2	(261)	3126	2931	1768844
1287	17.8	3.6	0.7	chr18	59382098	59382392	(20990893)	C	MLT1C	LTR/ERVL-MaLR	(163)	304	1	1768851
2247	10.3	0.0	0.3	chr18	59454254	59454544	(20918741)	C	AluSq2	SINE/Alu	(22)	291	2	1768977
948	10.1	0.0	4.3	chr18	59918192	59918301	(20454984)	C	FLAM_C	SINE/Alu	(35)	108	1	1769782
19	7.6	2.0	8.0	chr18	59918302	59918314	(20454971)	+	(TTTCT)n	Simple_repeat	5	16	(0)	1769784
257	32.3	20.2	0.0	chr18	61088681	61088810	(19284475)	+	MIR3	SINE/MIR	32	194	(14)	1771412
35	0.0	0.0	0.0	chr18	61088928	61088965	(19284320)	+	(GA)n	Simple_repeat	1	38	(0)	1771413
51	0.0	0.0	0.0	chr18	61088966	61089009	(19284276)	+	(GT)n	Simple_repeat	1	44	(0)	1771414
29	13.8	7.2	2.2	chr18	61959791	61959873	(18413412)	+	(CTCTGT)n	Simple_repeat	1	89	(0)	1772717
50	0.0	0.0	0.0	chr18	61959876	61959918	(18413367)	+	(AC)n	Simple_repeat	1	43	(0)	1772718
23	20.3	7.6	0.0	chr18	62187169	62187247	(18186038)	+	G-rich	Low_complexity	1	85	(0)	1773094
12	28.8	0.0	0.0	chr18	62187299	62187340	(18185945)	+	(GCTGCA)n	Simple_repeat	1	42	(0)	1773095
11	26.0	0.0	5.8	chr18	62526814	62526865	(17846420)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1773603
417	14.2	6.6	2.5	chr18	63091345	63092387	(17280898)	+	(GT)n	Simple_repeat	1	1112	(0)	1774545
325	11.0	8.5	2.9	chr18	63103239	63104046	(17269239)	+	(TG)n	Simple_repeat	1	877	(0)	1774564
739	21.3	1.2	0.4	chr18	63198160	63199782	(17173503)	+	(AC)n	Simple_repeat	1	1643	(0)	1774698
1647	23.6	5.2	1.7	chr18	63276600	63277009	(17096276)	+	MER20B	DNA/hAT-Charlie	349	773	(10)	1774812
13	28.1	0.0	4.9	chr18	63422145	63422205	(16951080)	+	(CTTCTCC)n	Simple_repeat	1	61	(0)	1775046
24	17.3	0.0	0.0	chr18	63970124	63970178	(16403107)	+	(AGC)n	Simple_repeat	1	55	(0)	1775846
171	12.5	6.3	2.2	chr18	77118568	77118949	(3254336)	+	(AC)n	Simple_repeat	1	406	(0)	1793078
12	23.6	0.0	9.2	chr18	79069339	79069403	(1303882)	+	G-rich	Low_complexity	1	65	(0)	1795141
474	28.4	7.3	5.0	chr18	79965675	79965915	(407370)	C	L1MB7	LINE/L1	(1072)	5074	4828	1795944
28	23.0	6.9	4.1	chr19	489272	489430	(58128186)	+	(CCCCGAC)n	Simple_repeat	1	170	(0)	1797014
13	8.8	0.0	3.9	chr19	572575	572600	(58045016)	+	(GCG)n	Simple_repeat	1	26	(0)	1797176
962	0.9	0.0	0.9	chr19	893484	893585	(57724031)	+	U6	snRNA	1	102	(5)	1797832
482	30.2	4.1	6.5	chr19	996695	996849	(57620767)	+	L1MB3	LINE/L1	5429	5586	(594)	1798042
918	5.5	0.0	0.0	chr19	1000001	1000109	(57617507)	C	AluSx3	SINE/Alu	(201)	110	2	1798053
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
14	8.5	0.0	3.7	chr19	1095317	1095343	(57522273)	+	(GCC)n	Simple_repeat	1	27	(0)	1798212
13	6.7	5.7	5.4	chr19	1174174	1174208	(57443408)	+	G-rich	Low_complexity	1	37	(0)	1798318
258	29.4	4.8	1.1	chr19	1174393	1174528	(57443088)	+	MIR	SINE/MIR	30	174	(56)	1798319
18	18.4	0.0	0.0	chr19	1207265	1207302	(57410314)	+	(CTTC)n	Simple_repeat	1	38	(0)	1798410
385	29.2	6.2	3.4	chr19	1261340	1261573	(57356043)	C	L2c	LINE/L2	(214)	3173	2933	1798478
13	12.1	7.9	2.4	chr19	1325363	1325400	(57292216)	+	(GCG)n	Simple_repeat	1	41	(0)	1798581
29	2.6	5.1	0.0	chr19	1592382	1592420	(57025196)	+	(CACG)n	Simple_repeat	1	41	(0)	1799091
15	21.8	0.0	5.7	chr19	1592422	1592474	(57025142)	+	G-rich	Low_complexity	1	53	(0)	1799092
191	30.4	5.1	0.0	chr19	1606258	1606313	(57011303)	+	L2b	LINE/L2	3123	3181	(194)	1799133
19	26.3	3.7	2.4	chr19	1652614	1652694	(56964922)	+	(CCGCG)n	Simple_repeat	1	84	(0)	1799198
16	19.3	0.0	4.4	chr19	1848420	1848464	(56769152)	+	(CGC)n	Simple_repeat	1	45	(0)	1799618
13	14.0	4.7	4.4	chr19	1940696	1940738	(56676878)	+	(CGCCGC)n	Simple_repeat	1	45	(0)	1799810
2316	9.6	0.3	1.6	chr19	2060229	2060542	(56557074)	C	AluSx	SINE/Alu	(2)	310	1	1800055
2305	8.6	2.9	0.3	chr19	2095740	2096043	(56521573)	C	AluSx	SINE/Alu	(0)	312	1	1800144
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
13	17.7	3.1	0.0	chr19	2328712	2328743	(56288873)	+	(GGC)n	Simple_repeat	1	33	(0)	1800571
1717	16.0	6.3	0.4	chr19	2385587	2385867	(56231749)	+	AluJb	SINE/Alu	1	299	(13)	1800675
17	19.3	0.0	2.3	chr19	2476438	2476480	(56141136)	+	G-rich	Low_complexity	1	43	(0)	1800892
2384	7.7	0.0	0.0	chr19	2599655	2599951	(56017665)	+	AluSx	SINE/Alu	1	297	(15)	1801198
652	11.4	5.0	0.0	chr19	2599952	2600065	(56017551)	+	L1MB7	LINE/L1	6063	6182	(2)	1801199
30	0.0	3.1	0.0	chr19	2648873	2648904	(55968712)	+	(TTTTTGT)n	Simple_repeat	1	33	(0)	1801333
1433	13.6	0.7	15.7	chr19	2648905	2649236	(55968380)	C	AluJb	SINE/Alu	(28)	284	3	1801334
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
2203	11.5	0.0	0.0	chr19	2840491	2840786	(55776830)	C	AluSx1	SINE/Alu	(16)	296	1	1801761
2187	10.1	0.0	0.3	chr19	2945533	2945829	(55671787)	+	AluSq	SINE/Alu	1	296	(17)	1801971
2315	8.2	1.9	0.7	chr19	2961804	2962107	(55655509)	C	AluY	SINE/Alu	(3)	308	1	1802024
369	29.6	2.3	0.0	chr19	2962110	2962234	(55655382)	+	L1ME1	LINE/L1	6039	6166	(13)	1802025
821	16.1	0.7	0.7	chr19	2968480	2968616	(55649000)	+	AluSz6	SINE/Alu	1	137	(175)	1802046
2137	11.2	0.0	1.0	chr19	2968618	2968912	(55648704)	+	AluSc	SINE/Alu	4	295	(14)	1802047
276	22.6	1.4	0.9	chr19	3036000	3036071	(55581545)	C	MIR1_Amn	SINE/MIR	(99)	169	103	1802226
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
2528	5.9	0.3	0.0	chr19	3093611	3093914	(55523702)	C	AluSp	SINE/Alu	(8)	305	1	1802402
14	19.2	3.3	4.8	chr19	3094020	3094059	(55523557)	+	(GCCGCG)n	Simple_repeat	1	39	(0)	1802403
33	4.4	2.0	2.0	chr19	3094060	3094108	(55523508)	+	(GAGCCGAGCG)n	Simple_repeat	1	50	(0)	1802404
2149	8.2	5.9	1.4	chr19	3103693	3103984	(55513632)	C	AluY	SINE/Alu	(5)	306	1	1802419
1895	11.2	3.2	1.8	chr19	3103985	3104118	(55513498)	C	AluSx1	SINE/Alu	(178)	134	2	1802418
519	23.1	1.7	1.7	chr19	3185311	3185429	(55432187)	C	L2a	LINE/L2	(0)	3426	3308	1802593
707	27.9	7.9	3.5	chr19	3210414	3210947	(55406669)	C	L2b	LINE/L2	(93)	3282	2723	1802637
1235	10.1	27.3	0.0	chr19	3505502	3505719	(55111897)	C	AluSx	SINE/Alu	(12)	300	1	1803450
2421	18.9	3.8	4.1	chr19	3505720	3505733	(55111883)	C	L1MB7	LINE/L1	(601)	5583	5573	1803447
228	27.0	8.6	0.0	chr19	3505734	3505807	(55111809)	+	L2a	LINE/L2	3346	3426	(0)	1803451
13	32.3	0.0	1.7	chr19	3721714	3721772	(54895844)	+	GA-rich	Low_complexity	1	59	(0)	1803877
251	28.4	0.8	0.3	chr19	4197343	4198009	(54419607)	+	(AATG)n	Simple_repeat	1	672	(0)	1805012
1311	27.2	9.3	1.2	chr19	4233349	4233922	(54383694)	+	L2a	LINE/L2	2573	3186	(240)	1805107
1070	28.1	2.0	0.3	chr19	4633083	4633448	(53984168)	C	L2a	LINE/L2	(319)	3107	2736	1806060
249	27.3	6.1	5.4	chr19	4633392	4633538	(53984078)	+	MIR3	SINE/MIR	8	155	(53)	1806072
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1505	10.8	0.0	21.0	chr19	4725113	4725493	(53892123)	C	AluJr	SINE/Alu	(11)	301	1	1806269
2046	12.4	0.0	0.3	chr19	4725556	4725837	(53891779)	C	AluSq	SINE/Alu	(32)	281	1	1806270
1176	17.6	2.1	0.9	chr19	4790512	4790740	(53826876)	+	L1M2	LINE/L1	5444	5675	(616)	1806480
2295	10.8	0.3	0.0	chr19	4790741	4791047	(53826569)	+	AluSq2	SINE/Alu	1	308	(5)	1806481
19	28.1	3.0	3.9	chr19	4791064	4791164	(53826452)	+	A-rich	Low_complexity	1	104	(0)	1806482
15	15.8	7.8	1.8	chr19	4909661	4909711	(53707905)	+	G-rich	Low_complexity	1	55	(0)	1806852
258	25.4	1.6	10.0	chr19	4969861	4970000	(53647616)	C	MamRep1879	DNA/hAT-Tip100?	(72)	144	17	1807000
1975	13.6	0.0	0.0	chr19	5501711	5501983	(53115633)	+	AluSz	SINE/Alu	1	273	(39)	1808168
95	19.5	2.3	1.4	chr19	5501989	5502202	(53115414)	+	A-rich	Low_complexity	1	219	(0)	1808169
1202	19.0	5.2	0.0	chr19	5502203	5502439	(53115177)	+	MLT1F1	LTR/ERVL-MaLR	320	569	(0)	1808167
817	26.9	3.9	4.1	chr19	5523006	5523478	(53094138)	+	L2b	LINE/L2	2702	3223	(164)	1808235
216	22.3	0.4	0.6	chr19	5681430	5681899	(52935717)	+	(CCAT)n	Simple_repeat	1	472	(0)	1808577
13	15.8	2.7	2.6	chr19	5903566	5903602	(52714014)	+	(CCCTCGG)n	Simple_repeat	1	38	(0)	1809109
299	33.5	10.4	5.0	chr19	5968780	5969140	(52648476)	C	L2b	LINE/L2	(19)	3356	2974	1809185
1986	16.1	0.0	1.3	chr19	6126095	6126392	(52491224)	C	AluJr	SINE/Alu	(18)	294	1	1809479
21	0.0	0.0	0.0	chr19	6126404	6126426	(52491190)	+	(AC)n	Simple_repeat	1	23	(0)	1809480
1379	25.1	9.3	6.3	chr19	6126478	6126984	(52490632)	C	LTR55	LTR/ERVL?	(24)	524	1	1809481
2334	7.6	0.0	1.0	chr19	6371910	6372210	(52245406)	C	AluSx	SINE/Alu	(14)	298	1	1810085
655	23.1	6.2	7.6	chr19	6372211	6372265	(52245351)	C	L1MC5	LINE/L1	(230)	9074	9015	1810084
358	28.6	12.1	2.6	chr19	6994859	6995052	(51622564)	+	MIRb	SINE/MIR	38	252	(16)	1811762
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
2530	5.4	0.0	0.3	chr19	7380197	7380492	(51237124)	+	AluY	SINE/Alu	1	295	(16)	1812797
1679	12.9	0.0	16.0	chr19	7380493	7380702	(51236914)	+	AluJr	SINE/Alu	129	301	(11)	1812795
247	14.1	1.0	7.0	chr19	7380721	7380791	(51236825)	C	MER91B	DNA/hAT-Tip100	(3316)	208	81	1812794
2037	6.6	0.0	1.2	chr19	7488518	7488775	(51128841)	+	AluSc8	SINE/Alu	1	255	(56)	1813041
416	33.0	9.3	2.2	chr19	7521948	7522306	(51095310)	C	L2b	LINE/L2	(470)	2949	2563	1813138
16	23.5	1.5	4.5	chr19	7830142	7830206	(50787410)	+	G-rich	Low_complexity	1	66	(0)	1813826
47	2.1	2.1	0.0	chr19	7891525	7891572	(50726044)	+	(GT)n	Simple_repeat	1	49	(0)	1813928
2365	9.4	0.0	1.0	chr19	7891602	7891909	(50725707)	C	AluSx1	SINE/Alu	(7)	305	1	1813929
18	19.5	2.0	2.0	chr19	7903905	7903953	(50713663)	+	(GGC)n	Simple_repeat	1	50	(0)	1813951
1003	15.8	1.2	0.0	chr19	7944483	7944640	(50672976)	C	AluJo	SINE/Alu	(15)	297	138	1814012
297	29.2	0.0	3.2	chr19	8005998	8006113	(50611503)	+	MIRc	SINE/MIR	47	155	(53)	1814132
11	18.8	4.3	4.2	chr19	8209445	8209490	(50408126)	+	(CCCCGGC)n	Simple_repeat	1	48	(0)	1814708
12	10.1	8.3	5.8	chr19	8209546	8209593	(50408023)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1814709
2047	11.7	0.0	1.1	chr19	8439098	8439409	(50178207)	+	AluSc	SINE/Alu	2	309	(0)	1815333
2215	12.4	0.7	0.0	chr19	8439420	8439726	(50177890)	+	AluSx3	SINE/Alu	1	309	(2)	1815334
12	22.0	4.8	4.5	chr19	8444846	8444908	(50172708)	+	G-rich	Low_complexity	1	66	(0)	1815352
14	26.3	0.0	0.0	chr19	8445001	8445041	(50172575)	+	(GGC)n	Simple_repeat	1	41	(0)	1815353
922	12.0	0.0	0.8	chr19	8447604	8447736	(50169880)	+	AluJb	SINE/Alu	2	133	(179)	1815356
286	28.1	3.5	7.3	chr19	8552851	8553000	(50064616)	C	LTR91	LTR/ERVL	(15)	184	41	1815564
19	8.1	0.0	0.0	chr19	8553059	8553084	(50064532)	+	(GT)n	Simple_repeat	1	26	(0)	1815565
29	0.0	0.0	0.0	chr19	8610423	8610447	(50007169)	+	(AC)n	Simple_repeat	1	25	(0)	1815706
199	26.2	1.5	1.7	chr19	8910742	8911325	(49706291)	+	(ATC)n	Simple_repeat	1	593	(0)	1816341
159	27.7	1.7	0.6	chr19	8915864	8916331	(49701285)	+	(ATC)n	Simple_repeat	1	476	(0)	1816345
332	24.8	11.4	2.9	chr19	8916333	8916436	(49701180)	+	L2a	LINE/L2	3302	3415	(11)	1816346
430	25.0	6.0	2.1	chr19	9140307	9140449	(49477167)	+	LTR33B	LTR/ERVL	77	225	(278)	1816898
16	21.6	3.1	4.5	chr19	9835271	9835334	(48782282)	+	(GGCGGC)n	Simple_repeat	1	66	(0)	1818235
26	9.3	0.0	2.1	chr19	10010012	10010059	(48607557)	+	(ATGCACACAC)n	Simple_repeat	1	48	(0)	1818679
347	26.5	1.0	3.1	chr19	10028025	10028144	(48589472)	+	MIR	SINE/MIR	45	168	(100)	1818727
1352	11.4	0.0	0.5	chr19	10120092	10120104	(48497512)	+	AluSx1	SINE/Alu	120	132	(180)	1818935
2470	6.9	0.3	0.0	chr19	10120105	10120407	(48497209)	+	AluSx	SINE/Alu	1	304	(8)	1818936
15	4.7	0.0	0.0	chr19	10195192	10195213	(48422403)	+	(CATT)n	Simple_repeat	1	22	(0)	1819117
418	27.5	6.2	0.8	chr19	10195259	10195400	(48422216)	+	MIRb	SINE/MIR	34	187	(43)	1819118
284	33.0	19.6	2.0	chr19	10228987	10229283	(48388333)	+	L2a	LINE/L2	2720	3081	(338)	1819214
2301	10.5	0.0	0.0	chr19	10229296	10229589	(48388027)	C	AluSx1	SINE/Alu	(18)	294	1	1819215
16	15.7	2.1	6.1	chr19	10289848	10289895	(48327721)	+	(CGC)n	Simple_repeat	1	49	(0)	1819380
52	2.1	0.0	0.0	chr19	10404178	10404226	(48213390)	+	(CA)n	Simple_repeat	1	49	(0)	1819650
12	22.4	7.7	0.0	chr19	10416972	10417023	(48200593)	+	(GGCGAGG)n	Simple_repeat	1	56	(0)	1819689
14	13.0	0.0	7.7	chr19	10654426	10654464	(47963152)	+	(CGG)n	Simple_repeat	1	39	(0)	1820366
12	22.0	4.8	0.0	chr19	10654506	10654547	(47963069)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	1820367
12	5.5	0.0	0.0	chr19	10654716	10654734	(47962882)	+	(GGC)n	Simple_repeat	1	19	(0)	1820368
1018	27.9	3.0	9.2	chr19	10879087	10879437	(47738179)	C	MLT1J	LTR/ERVL-MaLR	(159)	353	17	1820907
2370	9.4	0.0	0.0	chr19	10936490	10936787	(47680829)	+	AluSx1	SINE/Alu	1	298	(14)	1821038
16	8.5	0.0	0.0	chr19	10960669	10960693	(47656923)	+	(CCG)n	Simple_repeat	1	25	(0)	1821123
299	24.2	4.8	8.7	chr19	11380719	11380842	(47236774)	+	MIR3	SINE/MIR	29	153	(55)	1822180
14	24.0	0.0	0.0	chr19	11380923	11380961	(47236655)	+	(AGGATG)n	Simple_repeat	1	39	(0)	1822181
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
2540	4.4	0.3	0.3	chr19	12682007	12682304	(45935312)	C	AluYc	SINE/Alu	(0)	299	2	1824985
13	23.9	0.0	4.2	chr19	12696486	12696533	(45921083)	+	(GGTCTG)n	Simple_repeat	1	48	(0)	1825025
38	8.5	0.0	0.0	chr19	12722562	12722612	(45895004)	+	(A)n	Simple_repeat	1	51	(0)	1825078
12	21.1	0.0	4.8	chr19	12790135	12790176	(45827440)	+	(GCTGGAG)n	Simple_repeat	1	42	(0)	1825217
11	29.4	1.5	4.4	chr19	12792580	12792646	(45824970)	+	(AAGCGG)n	Simple_repeat	1	68	(0)	1825218
16	29.8	1.6	0.0	chr19	12806495	12806555	(45811061)	+	(GCAGCG)n	Simple_repeat	1	62	(0)	1825249
35	28.5	2.0	3.3	chr19	12833820	12833883	(45783733)	+	(CCG)n	Simple_repeat	1	104	(47)	1825326
29	8.4	0.0	5.4	chr19	12833884	12833940	(45783676)	+	(CTCCTCC)n	Simple_repeat	1	53	(0)	1825327
35	28.5	2.0	3.3	chr19	12833941	12833967	(45783649)	+	(CCG)n	Simple_repeat	105	151	(0)	1825326
18	27.8	1.6	3.1	chr19	12842010	12842073	(45775543)	+	(GT)n	Simple_repeat	1	65	(0)	1825339
18	21.1	0.0	0.0	chr19	12842205	12842242	(45775374)	+	(TG)n	Simple_repeat	1	38	(0)	1825340
2498	9.3	0.0	0.0	chr19	12842281	12842592	(45775024)	C	AluSx1	SINE/Alu	(0)	312	1	1825341
15	17.7	1.7	8.2	chr19	12946025	12946084	(45671532)	+	G-rich	Low_complexity	1	61	(0)	1825594
13	18.3	2.6	2.5	chr19	12957099	12957137	(45660479)	+	(CCGCGG)n	Simple_repeat	1	40	(0)	1825617
284	14.3	0.0	2.0	chr19	12983816	12983865	(45633751)	+	MIR1_Amn	SINE/MIR	109	157	(73)	1825707
20	25.1	4.0	2.6	chr19	12995102	12995175	(45622441)	+	(TG)n	Simple_repeat	1	77	(0)	1825727
23	19.2	0.0	3.4	chr19	12995313	12995320	(45622296)	+	(GCGTGT)n	Simple_repeat	1	57	(0)	1825728
29	16.2	0.0	0.0	chr19	12995321	12995369	(45622247)	+	(GT)n	Simple_repeat	1	49	(0)	1825729
29	17.1	1.4	2.9	chr19	12995372	12995440	(45622176)	+	(CCGC)n	Simple_repeat	1	70	(0)	1825730
18	4.5	0.0	0.0	chr19	13026722	13026744	(45590872)	+	(CT)n	Simple_repeat	1	23	(0)	1825778
29	0.0	0.0	0.0	chr19	13026745	13026769	(45590847)	+	(TG)n	Simple_repeat	1	25	(0)	1825779
3470	17.3	3.3	0.2	chr19	13537390	13538014	(45079602)	+	LTR9D	LTR/ERV1	1	645	(0)	1827041
156	12.8	3.3	6.2	chr19	13633610	13634001	(44983615)	+	(CTTC)n	Simple_repeat	1	405	(0)	1827334
2250	10.8	0.0	0.3	chr19	13879745	13880039	(44737577)	+	AluSx	SINE/Alu	3	296	(16)	1828035
18	22.1	2.9	4.3	chr19	13952544	13952611	(44665005)	+	(GCG)n	Simple_repeat	1	70	(0)	1828204
14	19.0	3.3	6.3	chr19	14073772	14073832	(44543784)	+	(GAGCGC)n	Simple_repeat	1	63	(0)	1828507
12	21.6	0.0	0.0	chr19	14136479	14136510	(44481106)	+	G-rich	Low_complexity	1	32	(0)	1828671
62	14.5	0.0	0.0	chr19	14204663	14204768	(44412848)	+	(AGAG)n	Simple_repeat	1	106	(0)	1828818
36	25.6	2.7	3.9	chr19	14248619	14248767	(44368849)	+	(CCCT)n	Simple_repeat	1	153	(0)	1828949
1018	12.8	3.8	1.6	chr19	14417702	14417883	(44199733)	+	AluJb	SINE/Alu	120	305	(7)	1829437
1740	10.3	15.8	0.0	chr19	14417888	14418149	(44199467)	+	AluSz	SINE/Alu	1	311	(1)	1829439
2283	8.4	1.3	1.9	chr19	14418452	14418759	(44198857)	C	AluSz	SINE/Alu	(6)	306	1	1829440
14	21.2	0.0	7.1	chr19	15379968	15380023	(43237593)	+	(GCCCC)n	Simple_repeat	1	56	(0)	1831697
12	11.6	4.7	6.7	chr19	16111699	16111741	(42505875)	+	(GCGCTCC)n	Simple_repeat	1	45	(0)	1833149
13	32.1	0.0	5.0	chr19	16185622	16185701	(42431915)	+	A-rich	Low_complexity	1	80	(0)	1833355
219	29.2	5.9	5.0	chr19	16197566	16197666	(42419950)	+	L2b	LINE/L2	3221	3322	(53)	1833390
12	24.3	0.0	4.3	chr19	16197976	16198022	(42419594)	+	(CGCTGC)n	Simple_repeat	1	47	(0)	1833391
3993	8.4	3.2	0.4	chr19	16824709	16825246	(41792370)	+	MER41A	LTR/ERV1	1	554	(0)	1834904
767	31.2	7.5	0.9	chr19	16825339	16825687	(41791929)	+	L2b	LINE/L2	2612	2985	(434)	1834905
505	19.4	2.0	0.0	chr19	17225480	17225577	(41392039)	+	MER66C	LTR/ERV1	371	470	(85)	1835788
592	15.6	1.0	3.1	chr19	17225589	17225716	(41391900)	+	AluSx	SINE/Alu	1	213	(89)	1835789
2013	9.0	1.7	5.7	chr19	17225717	17226016	(41391600)	+	AluSz	SINE/Alu	1	288	(24)	1835790
24	28.9	0.0	0.0	chr19	17309575	17309645	(41307971)	+	(GGC)n	Simple_repeat	1	71	(0)	1835999
1864	15.0	2.5	1.1	chr19	17345946	17346225	(41271391)	C	AluJr4	SINE/Alu	(28)	284	1	1836083
2294	12.4	0.0	0.6	chr19	17889115	17889428	(40728188)	+	AluSx1	SINE/Alu	1	312	(0)	1837538
28	18.0	2.5	0.0	chr19	17889430	17889492	(40728124)	+	A-rich	Low_complexity	1	64	(0)	1837539
960	13.1	2.0	0.7	chr19	17889493	17889637	(40727979)	C	AluJr	SINE/Alu	(30)	282	136	1837540
1887	17.2	1.7	0.3	chr19	17902534	17902830	(40714786)	C	AluJr	SINE/Alu	(11)	301	1	1837574
13	18.9	0.0	0.0	chr19	17903002	17903031	(40714585)	+	(GGT)n	Simple_repeat	1	30	(0)	1837575
520	28.7	2.1	10.3	chr19	17903047	17903080	(40714536)	C	L1PREC2	LINE/L1	(1736)	4410	4376	1837576
1850	17.5	1.6	0.7	chr19	17903081	17903389	(40714227)	C	AluJo	SINE/Alu	(0)	312	1	1837577
395	31.3	0.9	0.0	chr19	18022253	18022367	(40595249)	+	MLT1K	LTR/ERVL-MaLR	132	247	(348)	1837872
395	28.8	11.6	1.4	chr19	18022520	18022727	(40594889)	C	L2c	LINE/L2	(188)	3199	2968	1837873
372	26.3	1.0	0.0	chr19	18030214	18030312	(40587304)	+	MIR	SINE/MIR	51	150	(112)	1837895
196	32.4	1.3	3.9	chr19	18118681	18118757	(40498859)	+	MIRc	SINE/MIR	82	156	(112)	1838150
451	27.4	1.6	0.8	chr19	18118745	18118869	(40498747)	+	MIRb	SINE/MIR	18	143	(125)	1838151
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
881	18.0	0.6	1.9	chr19	18416317	18416477	(40201139)	C	AluJb	SINE/Alu	(17)	295	137	1838865
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
13	11.7	3.6	0.0	chr19	18522100	18522127	(40095489)	+	(CGCCA)n	Simple_repeat	1	29	(0)	1839004
882	19.2	1.8	1.2	chr19	18522822	18522988	(40094628)	C	AluJb	SINE/Alu	(7)	305	138	1839005
2327	9.7	0.7	0.3	chr19	18522996	18523304	(40094312)	C	AluSx1	SINE/Alu	(0)	312	3	1839006
2518	7.7	0.3	0.3	chr19	18557151	18557463	(40060153)	+	AluSp	SINE/Alu	1	313	(0)	1839119
275	28.1	4.9	8.2	chr19	18557493	18557639	(40059977)	+	MIR3	SINE/MIR	4	145	(63)	1839120
13	8.9	0.0	3.9	chr19	18572093	18572118	(40045498)	+	(GCCT)n	Simple_repeat	1	26	(0)	1839154
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
16	14.8	0.0	4.9	chr19	18636946	18636986	(39980630)	+	(CCCCG)n	Simple_repeat	1	41	(0)	1839290
13	33.5	1.6	1.6	chr19	18637038	18637100	(39980516)	+	(GCG)n	Simple_repeat	1	64	(0)	1839291
2186	12.8	0.0	0.0	chr19	18678514	18678810	(39938806)	+	AluSz	SINE/Alu	1	297	(15)	1839353
32	3.0	0.0	0.0	chr19	18683656	18683689	(39933927)	+	(GAG)n	Simple_repeat	1	34	(0)	1839368
3056	13.0	0.4	8.0	chr19	19821199	19821247	(38796369)	+	MER57E3	LTR/ERV1	441	487	(0)	1841671
947	14.4	11.7	0.0	chr19	28425600	28425780	(30191836)	C	Tigger1a_Art	DNA/TcMar-Tigger	(3)	494	290	1848750
704	21.2	9.1	0.6	chr19	28425767	28425927	(30191689)	C	Tigger1a_Art	DNA/TcMar-Tigger	(321)	176	1	1848750
1863	18.7	1.0	0.0	chr19	28426078	28426377	(30191239)	+	AluSz	SINE/Alu	2	304	(8)	1848752
1463	27.7	1.6	2.5	chr19	28426378	28426661	(30190955)	+	MLT1C	LTR/ERVL-MaLR	185	466	(1)	1848751
1287	13.3	2.0	0.0	chr19	28431999	28432194	(30185422)	C	HERVH-int	LTR/ERV1	(1894)	5819	5620	1848761
429	17.1	1.2	3.5	chr19	28432187	28432271	(30185345)	C	HERVH-int	LTR/ERV1	(4491)	3222	3140	1848761
16280	9.9	3.0	2.3	chr19	28432266	28435349	(30182267)	C	HERVH-int	LTR/ERV1	(4726)	2987	1	1848761
1924	13.9	12.0	2.6	chr19	28707083	28707467	(29910149)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	1849145
657	17.8	3.7	0.1	chr19	29015377	29016739	(29600877)	+	(CT)n	Simple_repeat	1	1414	(0)	1849615
437	29.8	11.3	2.3	chr19	29211832	29212054	(29405562)	C	MER102a	DNA/hAT-Charlie	(1)	330	105	1849907
201	16.3	12.5	2.0	chr19	29212250	29212299	(29405317)	+	MIR3	SINE/MIR	88	143	(65)	1849908
15	5.5	0.0	0.0	chr19	29212376	29212394	(29405222)	+	(T)n	Simple_repeat	1	19	(0)	1849909
285	31.5	10.6	2.7	chr19	29212460	29212642	(29404974)	C	MIRb	SINE/MIR	(0)	268	70	1849910
1713	9.0	2.5	0.4	chr19	29760509	29760741	(28856875)	C	AluSx	SINE/Alu	(3)	309	72	1850778
357	29.6	15.4	0.0	chr19	29774920	29775034	(28842582)	C	MER91A	DNA/hAT-Tip100	(57)	139	4	1850817
58	1.9	0.0	0.0	chr19	29775093	29775146	(28842470)	+	(GT)n	Simple_repeat	1	54	(0)	1850818
237	26.0	0.5	0.0	chr19	29784627	29785189	(28832427)	+	(TGGA)n	Simple_repeat	1	566	(0)	1850840
14	20.0	2.4	2.3	chr19	29811263	29811304	(28806312)	+	(TGAA)n	Simple_repeat	1	43	(0)	1850905
14	17.6	0.0	4.8	chr19	29942570	29942632	(28674984)	+	(CGCCCCC)n	Simple_repeat	1	60	(0)	1851207
1722	16.2	0.3	1.8	chr19	29943853	29944136	(28673480)	+	AluJr	SINE/Alu	1	280	(32)	1851209
255	21.7	0.0	3.2	chr19	30115973	30116067	(28501549)	C	PRIMA4-int	LTR/ERV1	(7691)	579	488	1851417
3443	25.8	5.8	2.5	chr19	30124689	30125331	(28492285)	+	L1MC3	LINE/L1	6482	7145	(737)	1851429
2404	8.7	0.0	0.3	chr19	30125332	30125631	(28491985)	+	AluSq2	SINE/Alu	1	299	(14)	1851430
282	33.2	0.2	0.7	chr19	30170738	30170910	(28446706)	+	(GTGT)n	Simple_repeat	4	174	(0)	1851504
25	5.3	0.0	4.7	chr19	30170911	30170953	(28446663)	+	(TGTGTGAATG)n	Simple_repeat	1	43	(0)	1851505
282	33.2	0.2	0.7	chr19	30170954	30171708	(28445908)	+	(GTGT)n	Simple_repeat	3	756	(0)	1851506
15	4.8	0.0	0.0	chr19	30226674	30226695	(28390921)	+	(AAAT)n	Simple_repeat	1	22	(0)	1851576
325	20.1	0.9	0.3	chr19	30337888	30338541	(28279075)	+	(TGA)n	Simple_repeat	1	660	(0)	1851721
38	34.2	0.5	4.1	chr19	30375846	30376040	(28241576)	+	(TG)n	Simple_repeat	1	196	(0)	1851769
35	7.8	1.9	0.0	chr19	30426961	30427014	(28190602)	+	(ATCC)n	Simple_repeat	1	55	(0)	1851841
320	24.6	3.2	12.9	chr19	30427074	30427213	(28190403)	+	MIR3	SINE/MIR	71	196	(12)	1851842
478	21.2	0.2	0.0	chr19	30434665	30435628	(28181988)	+	(TGATGA)n	Simple_repeat	1	966	(0)	1851857
342	10.5	0.0	8.1	chr19	30538874	30538925	(28078691)	C	MLT2B4	LTR/ERVL	(0)	563	515	1852012
1014	11.4	0.0	0.0	chr19	30538926	30539057	(28078559)	+	FLAM_C	SINE/Alu	1	132	(11)	1852013
14	10.3	2.8	5.4	chr19	30539071	30539106	(28078510)	+	A-rich	Low_complexity	1	37	(0)	1852014
16	5.3	0.0	0.0	chr19	30539126	30539145	(28078471)	+	(CA)n	Simple_repeat	1	20	(0)	1852015
1576	17.5	4.7	5.4	chr19	30539147	30539538	(28078078)	C	MLT2B4	LTR/ERVL	(53)	361	1	1852012
516	33.8	3.2	2.5	chr19	30815643	30815825	(27801791)	C	L2	LINE/L2	(1429)	1990	1804	1852337
108	43.9	1.5	2.9	chr19	30815826	30816635	(27800981)	+	(TCTT)n	Simple_repeat	1	822	(0)	1852343
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
2231	7.8	0.3	0.3	chr19	32651377	32651669	(25965947)	C	AluY	SINE/Alu	(18)	293	1	1855225
30	0.0	5.0	2.4	chr19	32654761	32654800	(25962816)	+	(GTTT)n	Simple_repeat	1	42	(0)	1855233
1931	13.2	0.0	0.0	chr19	32654801	32655080	(25962536)	C	AluSz	SINE/Alu	(31)	281	2	1855234
1899	13.8	0.3	4.8	chr19	32655081	32655308	(25962308)	C	7SLRNA	srpRNA	(100)	220	1	1855232
12	13.4	4.2	8.0	chr19	32692415	32692462	(25925154)	+	(CCTGG)n	Simple_repeat	1	50	(0)	1855321
799	12.2	1.7	1.7	chr19	32972462	32972576	(25645040)	C	AluJo	SINE/Alu	(197)	115	1	1855840
2578	4.8	0.3	1.9	chr19	32972705	32973017	(25644599)	C	AluSg7	SINE/Alu	(1)	308	1	1855841
1000	28.8	6.6	4.2	chr19	33081373	33081885	(25535731)	C	L2a	LINE/L2	(58)	3317	2811	1856124
3026	17.9	7.5	2.4	chr19	33158466	33158698	(25458918)	+	Tigger17a	DNA/TcMar-Tigger	1	256	(398)	1856317
2171	11.7	2.9	0.0	chr19	33158699	33158997	(25458619)	C	AluSx	SINE/Alu	(2)	310	3	1856318
2290	8.5	0.0	4.4	chr19	33162196	33162512	(25455104)	C	AluY	SINE/Alu	(8)	303	1	1856326
1267	18.1	11.2	2.0	chr19	33171671	33171770	(25445846)	C	L1MC2	LINE/L1	(183)	6161	6057	1856347
2184	10.2	3.0	0.0	chr19	33171771	33172063	(25445553)	C	AluSx3	SINE/Alu	(9)	302	1	1856348
1267	18.1	11.2	2.0	chr19	33172064	33172318	(25445298)	C	L1MC2	LINE/L1	(288)	6056	5769	1856347
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
4252	15.6	2.2	3.5	chr19	33188255	33188620	(25428996)	C	L1MB3	LINE/L1	(0)	6183	5808	1856383
2288	10.2	0.0	1.0	chr19	33188621	33188925	(25428691)	+	AluSx	SINE/Alu	11	312	(0)	1856384
4252	15.6	2.2	3.5	chr19	33188926	33189327	(25428289)	C	L1MB3	LINE/L1	(376)	5807	5425	1856383
573	17.1	4.2	0.7	chr19	33249725	33250982	(25366634)	+	(AC)n	Simple_repeat	1	1311	(0)	1856479
35	8.8	0.0	0.0	chr19	33274201	33274248	(25343368)	+	(TG)n	Simple_repeat	1	48	(0)	1856521
49	37.9	0.0	0.9	chr19	33274297	33274517	(25343099)	+	(GT)n	Simple_repeat	1	221	(0)	1856522
15	7.5	0.0	6.2	chr19	33300281	33300312	(25317304)	+	(CAAAA)n	Simple_repeat	1	32	(0)	1856553
280	27.5	4.5	3.2	chr19	33310262	33310415	(25307201)	+	L2a	LINE/L2	2658	2813	(606)	1856568
741	11.8	0.9	0.9	chr19	33310419	33310528	(25307088)	+	AluJr	SINE/Alu	16	125	(187)	1856569
185	29.6	21.8	1.1	chr19	33375853	33376033	(25241583)	C	L2	LINE/L2	(526)	2893	2665	1856709
163	24.3	5.1	0.7	chr19	33422388	33422656	(25194960)	+	(ATCT)n	Simple_repeat	1	279	(0)	1856743
36	11.0	1.4	1.4	chr19	33422657	33422729	(25194887)	+	(CATC)n	Simple_repeat	1	74	(0)	1856744
163	24.3	5.1	0.7	chr19	33422730	33422986	(25194630)	+	(ATCT)n	Simple_repeat	4	273	(0)	1856745
64	25.8	3.4	3.3	chr19	33436072	33436307	(25181309)	+	GA-rich	Low_complexity	1	244	(0)	1856767
224	21.8	7.7	2.0	chr19	33458003	33458881	(25158735)	+	(GT)n	Simple_repeat	1	929	(0)	1856794
462	19.2	3.9	4.4	chr19	33505649	33507069	(25110547)	+	(AC)n	Simple_repeat	1	1477	(0)	1856851
13	7.7	0.0	9.1	chr19	33521826	33521858	(25095758)	+	G-rich	Low_complexity	1	33	(0)	1856870
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
115	20.5	5.7	1.7	chr19	33720191	33720524	(24897092)	+	(CA)n	Simple_repeat	1	353	(0)	1857223
27	0.0	0.0	0.0	chr19	33789659	33789684	(24827932)	+	(TGTTT)n	Simple_repeat	1	26	(0)	1857320
2018	13.7	0.0	0.0	chr19	33789685	33789968	(24827648)	C	AluSx1	SINE/Alu	(28)	284	1	1857321
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
43	0.0	0.0	0.0	chr19	33797248	33797284	(24820332)	+	(GT)n	Simple_repeat	1	37	(0)	1857333
20	0.0	0.0	3.9	chr19	33797285	33797303	(24820313)	+	(CG)n	Simple_repeat	1	19	(0)	1857334
2111	20.1	7.7	7.1	chr19	33856549	33856840	(24760776)	+	L1ME1	LINE/L1	5767	6052	(300)	1857407
2070	11.2	0.0	4.8	chr19	33856870	33857180	(24760436)	+	AluSz6	SINE/Alu	11	306	(6)	1857427
299	19.3	2.0	1.1	chr19	34056885	34057550	(24560066)	+	(TGGA)n	Simple_repeat	1	672	(0)	1857792
2148	11.6	0.7	0.3	chr19	34067130	34067458	(24550158)	C	AluSx	SINE/Alu	(0)	312	2	1857811
1656	29.5	10.3	1.7	chr19	34067459	34067540	(24550076)	+	L2	LINE/L2	2797	2882	(537)	1857809
515	34.9	5.4	0.7	chr19	34067554	34067833	(24549783)	+	L1ME3Cz	LINE/L1	285	578	(419)	1857812
1886	15.4	2.0	0.3	chr19	34117839	34118130	(24499486)	+	AluJo	SINE/Alu	2	298	(14)	1857932
80	19.6	1.2	0.0	chr19	34118131	34118293	(24499323)	+	GA-rich	Low_complexity	1	165	(0)	1857933
2316	10.2	0.7	0.0	chr19	34243304	34243606	(24374010)	+	AluSz	SINE/Alu	1	305	(7)	1858231
215	31.0	15.9	2.8	chr19	34254089	34254267	(24363349)	+	L2a	LINE/L2	3198	3404	(22)	1858248
13	20.4	0.0	4.7	chr19	34428369	34428411	(24189205)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	1858626
16	22.1	2.9	5.6	chr19	34428444	34428513	(24189103)	+	G-rich	Low_complexity	1	72	(0)	1858627
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
854	32.0	11.4	3.0	chr19	34962755	34963409	(23654207)	+	L2	LINE/L2	2366	3082	(337)	1859399
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
783	18.9	1.8	6.1	chr19	34973560	34973603	(23644013)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1859420
56	0.0	0.0	0.0	chr19	34973604	34973651	(23643965)	+	(GT)n	Simple_repeat	1	48	(0)	1859421
2231	8.5	0.3	0.0	chr19	34973652	34973934	(23643682)	C	AluSx1	SINE/Alu	(28)	284	1	1859422
37	28.6	2.4	0.8	chr19	35031335	35031458	(23586158)	+	GA-rich	Low_complexity	1	127	(0)	1859553
234	33.3	0.9	0.1	chr19	35105327	35106078	(23511538)	+	(CAC)n	Simple_repeat	1	759	(0)	1859733
24	6.1	2.9	0.0	chr19	35123347	35123380	(23494236)	+	(GT)n	Simple_repeat	1	35	(0)	1859771
12	13.9	0.0	0.0	chr19	35132271	35132294	(23485322)	+	(CCA)n	Simple_repeat	1	24	(0)	1859784
20	27.5	4.0	0.0	chr19	35132420	35132494	(23485122)	+	(CCA)n	Simple_repeat	1	78	(0)	1859785
16	32.4	2.0	4.0	chr19	35132895	35132993	(23484623)	+	(ACC)n	Simple_repeat	1	101	(0)	1859787
14	22.7	5.8	5.4	chr19	35140881	35140967	(23476649)	+	(CCTCTC)n	Simple_repeat	1	92	(0)	1859804
17	22.9	1.5	5.8	chr19	35267593	35267660	(23349956)	+	GA-rich	Low_complexity	1	69	(0)	1860057
19	16.2	0.0	2.3	chr19	35269706	35269748	(23347868)	+	(GGCG)n	Simple_repeat	1	43	(0)	1860065
12	15.8	0.0	3.3	chr19	35270024	35270053	(23347563)	+	G-rich	Low_complexity	1	30	(0)	1860066
778	15.1	5.8	5.0	chr19	35296745	35296983	(23320633)	+	(AC)n	Simple_repeat	1	240	(0)	1860123
778	15.1	5.8	5.0	chr19	35297120	35299087	(23318529)	+	(AC)n	Simple_repeat	1	1982	(0)	1860124
341	9.1	0.0	1.2	chr19	35392774	35392828	(23224788)	C	MLT2C2	LTR/ERVL	(1)	559	506	1860309
262	24.5	0.2	0.0	chr19	35392830	35393428	(23224188)	+	(TG)n	Simple_repeat	1	600	(0)	1860310
12	14.6	0.0	5.9	chr19	35545823	35545856	(23071760)	+	G-rich	Low_complexity	1	34	(0)	1860636
20	15.0	3.3	9.7	chr19	35557852	35557941	(23059675)	+	G-rich	Low_complexity	1	93	(0)	1860653
484	32.5	10.6	5.2	chr19	35615590	35615970	(23001646)	C	L2a	LINE/L2	(58)	3368	2912	1860776
601	24.6	0.0	9.3	chr19	35615993	35616034	(23001582)	+	MIR	SINE/MIR	51	80	(182)	1860777
2242	10.8	0.0	0.7	chr19	35616035	35616330	(23001286)	+	AluSz	SINE/Alu	1	294	(18)	1860778
1550	14.0	6.7	4.4	chr19	35692858	35693150	(22924466)	+	AluJo	SINE/Alu	5	304	(8)	1860984
2301	13.3	0.0	0.0	chr19	35693152	35693459	(22924157)	+	AluSx	SINE/Alu	1	308	(4)	1860985
2454	9.3	0.0	0.0	chr19	35701851	35702162	(22915454)	C	AluSx1	SINE/Alu	(0)	312	1	1861016
2146	10.5	2.3	0.3	chr19	35741831	35742124	(22875492)	+	AluSq2	SINE/Alu	2	301	(12)	1861060
332	26.9	2.8	14.0	chr19	35742125	35742187	(22875429)	+	MIR	SINE/MIR	209	262	(0)	1861058
2148	10.7	0.7	2.3	chr19	35758661	35758970	(22858646)	C	AluSx1	SINE/Alu	(6)	306	2	1861079
243	23.7	9.5	3.8	chr19	35820006	35820057	(22797559)	+	L2	LINE/L2	2339	2396	(1023)	1861233
62	0.0	0.0	0.0	chr19	35820058	35820110	(22797506)	+	(AC)n	Simple_repeat	1	53	(0)	1861234
243	23.7	9.5	3.8	chr19	35820111	35820136	(22797480)	+	L2	LINE/L2	2397	2422	(997)	1861233
83	41.4	2.0	0.7	chr19	35842690	35843236	(22774380)	+	(CATC)n	Simple_repeat	1	558	(0)	1861299
21	10.4	0.0	0.0	chr19	35935968	35935998	(22681618)	+	(GT)n	Simple_repeat	1	31	(0)	1861510
800	9.7	0.0	23.7	chr19	35947304	35947510	(22670106)	+	AluJr	SINE/Alu	140	297	(15)	1861521
49	0.0	0.0	0.0	chr19	35947598	35947639	(22669977)	+	(GT)n	Simple_repeat	1	42	(0)	1861522
1868	8.6	7.9	0.0	chr19	35947640	35947894	(22669722)	C	AluSc8	SINE/Alu	(34)	277	1	1861523
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
2404	7.8	0.0	0.0	chr19	35997075	35997369	(22620247)	+	AluSg	SINE/Alu	1	295	(15)	1861646
357	30.4	3.1	0.0	chr19	36107152	36107276	(22510340)	C	MLT1L	LTR/ERVL-MaLR	(143)	467	339	1861888
14	24.5	0.0	2.2	chr19	36115480	36115524	(22502092)	+	(GCGGCG)n	Simple_repeat	1	45	(0)	1861899
1820	13.3	0.4	3.9	chr19	36127347	36127631	(22489985)	+	AluJb	SINE/Alu	2	276	(36)	1861927
2149	12.0	0.3	0.7	chr19	36128838	36129128	(22488488)	+	AluSx3	SINE/Alu	16	305	(6)	1861930
2169	10.2	3.1	0.0	chr19	36129148	36129432	(22488184)	+	AluSp	SINE/Alu	1	294	(19)	1861931
2457	7.0	0.3	0.0	chr19	36136419	36136720	(22480896)	+	AluY	SINE/Alu	1	303	(8)	1861953
301	32.0	11.5	6.0	chr19	36136861	36137162	(22480454)	C	L2c	LINE/L2	(130)	3257	2937	1861954
2081	10.1	2.8	0.7	chr19	36169830	36170105	(22447511)	+	AluSx1	SINE/Alu	2	283	(29)	1862018
354	23.5	3.4	12.2	chr19	36170379	36170439	(22447177)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	492	1862023
2278	9.3	0.0	0.0	chr19	36170440	36170729	(22446887)	C	AluSx1	SINE/Alu	(22)	290	1	1862024
354	23.5	3.4	12.2	chr19	36170730	36170798	(22446818)	C	MLT1F	LTR/ERVL-MaLR	(57)	491	430	1862023
34	24.4	3.1	1.0	chr19	36214072	36214169	(22403447)	+	(AC)n	Simple_repeat	1	101	(0)	1862144
15	13.3	0.0	5.4	chr19	36214204	36214240	(22403376)	+	(CACAGG)n	Simple_repeat	1	37	(0)	1862145
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
15	16.8	0.0	0.0	chr19	36528950	36528976	(22088640)	+	(GT)n	Simple_repeat	1	27	(0)	1862728
1263	8.9	11.1	5.1	chr19	36574337	36574572	(22043044)	C	MER4D1	LTR/ERV1	(358)	252	1	1862815
551	25.5	16.5	0.2	chr19	36574576	36574951	(22042665)	C	L1ME3	LINE/L1	(122)	6042	5561	1862816
13	14.0	0.0	5.7	chr19	36605285	36605319	(22012297)	+	(GCGCAG)n	Simple_repeat	1	35	(0)	1862876
2035	15.2	3.0	0.0	chr19	36839390	36839685	(21777931)	C	AluJb	SINE/Alu	(1)	311	7	1863353
19	21.8	0.0	2.2	chr19	36916623	36916667	(21700949)	+	(TG)n	Simple_repeat	1	45	(0)	1863509
209	27.8	19.4	2.2	chr19	36916809	36916944	(21700672)	+	L2	LINE/L2	2042	2206	(1213)	1863510
2253	10.3	0.0	1.6	chr19	37210885	37211196	(21406420)	C	AluSz	SINE/Alu	(4)	308	2	1864025
2286	8.3	1.0	1.0	chr19	37466348	37466649	(21150967)	+	AluSp	SINE/Alu	1	302	(11)	1864479
27	29.8	0.0	4.0	chr19	37595201	37595301	(21022315)	+	(TG)n	Simple_repeat	1	101	(0)	1864717
461	21.2	0.8	4.8	chr19	37986855	37986919	(20630697)	C	MER5A1	DNA/hAT-Charlie	(29)	137	74	1865554
2338	11.8	0.0	0.0	chr19	37986920	37987225	(20630391)	C	AluSx	SINE/Alu	(4)	308	3	1865555
1382	17.9	6.2	0.4	chr19	38033407	38033663	(20583953)	+	AluJr	SINE/Alu	1	273	(39)	1865666
31	3.3	0.0	0.0	chr19	38033674	38033704	(20583912)	+	(TG)n	Simple_repeat	1	31	(0)	1865667
382	27.4	8.2	2.3	chr19	38033705	38033785	(20583831)	+	MER113	DNA/hAT-Charlie	437	520	(1)	1865665
292	34.2	12.5	6.3	chr19	38056377	38056691	(20560925)	+	L2b	LINE/L2	3038	3374	(1)	1865727
2257	11.0	0.3	0.0	chr19	38096249	38096548	(20521068)	C	AluSz	SINE/Alu	(11)	301	1	1865830
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
27	24.6	1.1	3.2	chr19	38226309	38226325	(20391291)	+	(CCCCCTC)n	Simple_repeat	2	93	(0)	1866154
42	0.0	0.0	0.0	chr19	38226504	38226539	(20391077)	+	(AC)n	Simple_repeat	1	36	(0)	1866155
2342	10.3	0.6	0.3	chr19	38243603	38243913	(20373703)	+	AluSq2	SINE/Alu	2	313	(0)	1866205
28	29.3	0.0	0.0	chr19	38243914	38243976	(20373640)	+	A-rich	Low_complexity	33	95	(0)	1866206
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
19	31.0	0.0	1.4	chr19	38336494	38336564	(20281052)	+	G-rich	Low_complexity	1	71	(0)	1866435
2297	11.2	0.0	0.0	chr19	38357670	38357965	(20259651)	+	AluSx1	SINE/Alu	1	296	(16)	1866497
1850	18.4	0.7	1.9	chr19	38357966	38358139	(20259477)	+	AluSz	SINE/Alu	136	306	(6)	1866496
12	9.1	4.2	0.0	chr19	38410099	38410122	(20207494)	+	(GGAA)n	Simple_repeat	1	25	(0)	1866593
418	26.3	0.0	0.0	chr19	38410223	38410336	(20207280)	C	L1MEi	LINE/L1	(50)	2162	2049	1866594
486	17.6	0.0	0.0	chr19	38468133	38468206	(20149410)	+	AluJo	SINE/Alu	95	168	(144)	1866727
61	23.0	6.1	2.0	chr19	38523437	38523666	(20093950)	+	(CCCTCCT)n	Simple_repeat	1	244	(0)	1866854
662	18.3	4.8	19.6	chr19	38544444	38544667	(20072949)	+	MER91B	DNA/hAT-Tip100	1	189	(1)	1866900
1953	7.9	0.7	11.6	chr19	38551026	38551382	(20066234)	C	AluSp	SINE/Alu	(0)	313	1	1866920
1133	24.2	5.8	6.1	chr19	38551383	38551400	(20066216)	C	L1MC4	LINE/L1	(988)	7054	7038	1866916
197	36.0	10.2	4.4	chr19	38551457	38551816	(20065800)	+	L2	LINE/L2	1805	2187	(1232)	1866921
1528	17.1	1.3	9.8	chr19	38578415	38578550	(20039066)	+	AluSq2	SINE/Alu	5	141	(172)	1867002
1680	13.0	13.5	0.0	chr19	38578551	38578819	(20038797)	+	AluSx1	SINE/Alu	1	311	(1)	1867003
1528	17.1	1.3	9.8	chr19	38578820	38578832	(20038784)	+	AluSq2	SINE/Alu	142	141	(172)	1867002
1736	17.1	0.3	3.4	chr19	38578833	38579130	(20038486)	+	AluJb	SINE/Alu	4	292	(20)	1867004
2286	9.2	0.3	1.6	chr19	38579139	38579443	(20038173)	+	AluSz	SINE/Alu	1	301	(11)	1867005
891	13.1	1.5	0.0	chr19	38619481	38619610	(19998006)	+	FLAM_C	SINE/Alu	2	133	(10)	1867102
2124	9.7	3.0	0.0	chr19	38633417	38633704	(19983912)	+	AluSq2	SINE/Alu	1	297	(16)	1867140
1612	10.4	0.5	0.0	chr19	38633739	38633950	(19983666)	+	AluSx	SINE/Alu	49	261	(51)	1867141
971	11.1	0.0	0.0	chr19	38633951	38634076	(19983540)	C	AluSz	SINE/Alu	(186)	126	1	1867142
18	25.9	4.2	2.7	chr19	38647566	38647637	(19969979)	+	(GC)n	Simple_repeat	1	75	(0)	1867185
2493	7.7	0.0	0.0	chr19	38652804	38653102	(19964514)	+	AluSx1	SINE/Alu	1	299	(13)	1867192
2344	10.1	0.7	0.0	chr19	38668406	38668713	(19948903)	+	AluSx3	SINE/Alu	1	310	(1)	1867211
960	11.9	8.6	1.3	chr19	38733104	38733254	(19884362)	C	AluJb	SINE/Alu	(13)	299	137	1867317
355	26.8	12.4	0.0	chr19	38733260	38733386	(19884230)	C	MIRb	SINE/MIR	(118)	150	6	1867318
2343	11.9	0.0	0.0	chr19	38786339	38786649	(19830967)	+	AluSz	SINE/Alu	1	311	(1)	1867447
106	34.9	2.1	2.7	chr19	38800725	38801334	(19816282)	+	(GATG)n	Simple_repeat	1	623	(0)	1867476
604	27.1	3.8	2.8	chr19	38801345	38801526	(19816090)	+	MIR	SINE/MIR	9	192	(70)	1867477
1698	14.2	0.0	10.3	chr19	38811344	38811673	(19805943)	+	AluJo	SINE/Alu	1	296	(16)	1867507
2485	9.0	0.3	0.0	chr19	38811732	38812043	(19805573)	+	AluSq2	SINE/Alu	1	313	(0)	1867508
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
2314	9.7	1.3	1.0	chr19	38887745	38888053	(19729563)	C	AluSg	SINE/Alu	(0)	310	1	1867676
378	34.3	11.1	1.1	chr19	38900755	38901128	(19716488)	C	L2a	LINE/L2	(0)	3426	3011	1867707
290	25.3	2.6	0.0	chr19	38901120	38901194	(19716422)	+	L2a	LINE/L2	3328	3404	(22)	1867706
2548	8.4	0.0	0.0	chr19	38908259	38908567	(19709049)	+	AluSg	SINE/Alu	1	309	(1)	1867724
994	10.3	0.0	0.0	chr19	38918932	38919067	(19698549)	+	AluSx	SINE/Alu	6	141	(171)	1867749
382	7.5	5.4	0.0	chr19	38919072	38919124	(19698492)	+	AluYj4	SINE/Alu	231	286	(25)	1867750
1257	10.3	0.6	0.0	chr19	38919126	38919299	(19698317)	+	AluSx	SINE/Alu	121	295	(17)	1867749
189	30.8	6.2	1.1	chr19	38919319	38919410	(19698206)	+	L2	LINE/L2	2830	2926	(493)	1867751
2003	21.7	13.8	4.5	chr19	38962221	38962706	(19654910)	+	LTR41	LTR/ERVL	64	622	(146)	1867851
2111	9.6	2.3	0.7	chr19	38962707	38963008	(19654608)	C	AluSc	SINE/Alu	(2)	307	1	1867852
2515	6.4	0.0	0.0	chr19	39013732	39014027	(19603589)	+	AluY	SINE/Alu	1	296	(15)	1868005
4169	18.1	5.0	7.5	chr19	39014028	39014431	(19603185)	C	MER68-int	LTR/ERVL	(1499)	1491	1079	1867989
629	24.8	8.6	0.7	chr19	39033010	39033159	(19584457)	C	MIR	SINE/MIR	(88)	174	12	1868055
2355	9.4	0.0	1.3	chr19	39033191	39033499	(19584117)	+	AluSz	SINE/Alu	1	305	(7)	1868056
2310	11.3	0.0	0.0	chr19	39051996	39052296	(19565320)	+	AluSz6	SINE/Alu	1	301	(11)	1868112
950	26.9	11.8	5.6	chr19	39052297	39052709	(19564907)	C	FordPrefect	DNA/hAT-Tip100	(1148)	535	94	1868100
2032	11.8	0.0	0.0	chr19	39060935	39061242	(19556374)	C	AluSx1	SINE/Alu	(0)	312	2	1868133
20	16.0	0.0	0.0	chr19	39061447	39061481	(19556135)	+	(TC)n	Simple_repeat	1	35	(0)	1868134
12	25.9	2.4	0.0	chr19	39061482	39061488	(19556128)	+	(TCCCTC)n	Simple_repeat	1	43	(0)	1868135
239	9.1	0.0	0.0	chr19	39061655	39061687	(19555929)	+	MLT1L	LTR/ERVL-MaLR	567	599	(11)	1868125
50	0.0	0.0	0.0	chr19	39061697	39061739	(19555877)	+	(GT)n	Simple_repeat	1	43	(0)	1868136
2179	12.6	0.0	0.0	chr19	39073255	39073564	(19544052)	C	AluSx1	SINE/Alu	(1)	311	2	1868174
309	27.3	0.1	0.1	chr19	39073565	39073642	(19543974)	+	MIRc	SINE/MIR	59	144	(86)	1868173
570	14.6	3.7	0.0	chr19	39073976	39074078	(19543538)	+	Alu	SINE/Alu	206	312	(0)	1868175
63	18.1	2.6	3.2	chr19	39074079	39074232	(19543384)	+	GA-rich	Low_complexity	1	158	(0)	1868176
373	21.5	18.4	10.2	chr19	39074343	39074539	(19543077)	C	L2a	LINE/L2	(0)	3426	3210	1868177
2492	7.0	0.3	0.0	chr19	39121577	39121878	(19495738)	C	AluSg	SINE/Alu	(7)	303	1	1868318
1901	9.1	0.4	0.0	chr19	39121880	39122121	(19495495)	C	AluSc	SINE/Alu	(66)	243	1	1868319
228	37.0	3.6	0.7	chr19	39160967	39161102	(19456514)	+	MIRc	SINE/MIR	53	192	(76)	1868421
199	36.6	6.7	2.5	chr19	39161171	39161327	(19456289)	C	L2b	LINE/L2	(36)	3339	3176	1868422
232	28.9	3.2	5.3	chr19	39161329	39161423	(19456193)	C	L2b	LINE/L2	(30)	3345	3253	1868423
1160	28.7	7.1	3.1	chr19	39161424	39161959	(19455657)	+	L2a	LINE/L2	2605	3180	(246)	1868424
2060	13.3	0.3	0.0	chr19	39195607	39195892	(19421724)	+	AluSz	SINE/Alu	16	302	(10)	1868506
64	30.8	2.6	1.8	chr19	39197363	39197584	(19420032)	+	(TC)n	Simple_repeat	1	222	(0)	1868508
1639	11.7	0.9	2.2	chr19	39197585	39197814	(19419802)	C	AluSx	SINE/Alu	(18)	294	68	1868509
1646	10.9	11.2	0.8	chr19	39202019	39202147	(19415469)	C	AluSx	SINE/Alu	(14)	298	162	1868519
2170	8.9	0.7	0.3	chr19	39202148	39202438	(19415178)	C	AluYh3a3	SINE/Alu	(0)	292	1	1868520
1882	14.5	3.2	0.0	chr19	39256262	39256537	(19361079)	C	AluSx1	SINE/Alu	(12)	300	16	1868677
766	24.1	18.6	4.2	chr19	39256599	39256928	(19360688)	+	LTR33	LTR/ERVL	38	425	(90)	1868678
1827	15.2	0.7	0.3	chr19	39276805	39277087	(19340529)	+	AluJb	SINE/Alu	21	304	(8)	1868731
1645	16.8	15.1	5.9	chr19	39277088	39277133	(19340483)	C	LTR47A	LTR/ERVL	(413)	39	4	1868729
2004	12.8	0.4	0.0	chr19	39277151	39277424	(19340192)	C	AluSz	SINE/Alu	(15)	297	23	1868732
43	0.0	0.0	0.0	chr19	39320306	39320342	(19297274)	+	(AC)n	Simple_repeat	1	37	(0)	1868830
16	17.1	3.0	0.0	chr19	39320466	39320498	(19297118)	+	(CA)n	Simple_repeat	1	34	(0)	1868831
15	8.6	7.7	2.4	chr19	39342130	39342180	(19275436)	+	(CGCCC)n	Simple_repeat	1	53	(0)	1868895
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
2219	12.3	0.0	0.3	chr19	39438906	39439206	(19178410)	C	AluSz	SINE/Alu	(12)	300	1	1869069
1671	12.0	1.3	14.8	chr19	39439207	39439345	(19178271)	C	AluSz	SINE/Alu	(174)	138	1	1869068
241	31.9	14.3	2.7	chr19	39506476	39506697	(19110919)	C	L2b	LINE/L2	(57)	3318	3067	1869226
862	14.2	4.6	2.8	chr19	39671948	39672111	(18945505)	+	HUERS-P3-int	LTR/ERV1	409	559	(6859)	1869457
4569	19.5	5.2	0.9	chr19	39672138	39673008	(18944608)	+	HUERS-P3-int	LTR/ERV1	743	1652	(7267)	1869457
2196	7.3	3.9	0.0	chr19	39677643	39677917	(18939699)	+	AluY	SINE/Alu	1	286	(25)	1869468
1275	20.6	1.5	0.0	chr19	39677918	39678179	(18939437)	C	ERVL-B4-int	LTR/ERVL	(3378)	2336	2071	1869469
13	22.5	2.0	3.9	chr19	39834170	39834219	(18783397)	+	(CCTCC)n	Simple_repeat	1	51	(0)	1869713
483	26.4	5.1	6.3	chr19	39845308	39845542	(18772074)	C	MIRc	SINE/MIR	(0)	268	11	1869734
57	24.5	4.6	1.0	chr19	39878439	39878633	(18738983)	+	(TCTC)n	Simple_repeat	1	204	(0)	1869809
1774	16.9	0.3	2.9	chr19	40141239	40141545	(18476071)	+	AluJo	SINE/Alu	2	300	(12)	1870295
1562	18.1	0.3	3.4	chr19	40141548	40141839	(18475777)	+	AluSx	SINE/Alu	17	299	(13)	1870296
2155	21.6	4.2	1.8	chr19	40141840	40142254	(18475362)	+	L1MC5a	LINE/L1	137	565	(2212)	1870294
2307	7.7	1.0	0.3	chr19	40187926	40188223	(18429393)	C	AluSg	SINE/Alu	(10)	300	1	1870431
2137	9.1	0.0	0.7	chr19	40188260	40188535	(18429081)	C	AluSx1	SINE/Alu	(34)	278	5	1870432
2668	23.1	4.0	5.0	chr19	40188546	40189116	(18428500)	+	Tigger9a	DNA/TcMar-Tigger	23	607	(125)	1870433
2108	11.4	0.0	8.5	chr19	40218889	40219229	(18398387)	+	AluSz	SINE/Alu	1	312	(0)	1870517
49	5.3	3.5	3.4	chr19	40219230	40219314	(18398302)	+	(AGGAA)n	Simple_repeat	1	88	(0)	1870518
546	29.6	4.1	1.6	chr19	40219347	40219538	(18398078)	C	L2b	LINE/L2	(1)	3374	3178	1870519
453	33.0	4.9	0.9	chr19	40219783	40219999	(18397617)	+	MIR	SINE/MIR	36	261	(1)	1870521
216	20.0	2.0	0.0	chr19	40220031	40220080	(18397536)	+	L2a	LINE/L2	3376	3426	(0)	1870522
229	26.3	9.5	3.1	chr19	40224858	40224955	(18392661)	+	L2b	LINE/L2	2363	2467	(952)	1870534
2344	8.8	1.0	0.0	chr19	40225063	40225358	(18392258)	C	AluSx	SINE/Alu	(13)	299	1	1870535
24	10.9	0.0	0.0	chr19	40285268	40285307	(18332309)	+	(CGGCAG)n	Simple_repeat	1	40	(0)	1870651
373	34.5	2.7	2.1	chr19	40286830	40286974	(18330642)	+	L2b	LINE/L2	3190	3335	(40)	1870654
2137	10.8	0.0	0.0	chr19	40305061	40305356	(18312260)	+	AluSx1	SINE/Alu	1	296	(16)	1870704
530	24.8	14.6	5.8	chr19	40403330	40403552	(18214064)	C	MIR	SINE/MIR	(0)	262	17	1870960
13	29.6	0.0	0.0	chr19	40425604	40425648	(18191968)	+	(CGG)n	Simple_repeat	1	45	(0)	1871022
371	23.0	16.0	3.1	chr19	40431993	40432122	(18185494)	C	L2a	LINE/L2	(0)	3426	3277	1871042
2335	10.6	0.0	0.0	chr19	40432129	40432429	(18185187)	+	AluSz	SINE/Alu	1	301	(11)	1871043
13	9.8	9.1	0.0	chr19	40444351	40444383	(18173233)	+	(AGCCGCG)n	Simple_repeat	1	36	(0)	1871078
2179	6.6	0.0	0.7	chr19	40445282	40445553	(18172063)	+	AluSz	SINE/Alu	2	271	(41)	1871080
431	17.5	0.0	0.0	chr19	40445570	40445632	(18171984)	C	AluJr	SINE/Alu	(201)	111	49	1871081
493	33.0	6.2	5.2	chr19	40445674	40445945	(18171671)	+	L2b	LINE/L2	3094	3368	(7)	1871082
872	27.7	8.3	4.8	chr19	40523132	40523330	(18094286)	C	L2a	LINE/L2	(215)	3211	3011	1871310
2042	11.4	3.4	0.0	chr19	40523811	40524091	(18093525)	C	AluSg	SINE/Alu	(19)	291	1	1871312
710	26.4	1.1	4.2	chr19	40540882	40541151	(18076465)	C	L1ME3Cz	LINE/L1	(458)	372	107	1871361
226	28.8	3.7	0.9	chr19	40541260	40541364	(18076252)	C	MIRc	SINE/MIR	(118)	150	43	1871362
23	22.0	5.2	2.5	chr19	40541659	40541735	(18075881)	+	(CT)n	Simple_repeat	1	81	(0)	1871363
243	32.7	3.2	1.7	chr19	40598566	40598696	(18018920)	C	MIR3	SINE/MIR	(136)	132	2	1871499
12	11.0	2.9	5.7	chr19	40602488	40602521	(18015095)	+	(GCCCA)n	Simple_repeat	1	35	(0)	1871503
13	32.6	0.0	0.0	chr19	40602563	40602607	(18015009)	+	(CTCC)n	Simple_repeat	1	45	(0)	1871504
1675	15.5	1.9	0.8	chr19	40604575	40604838	(18012778)	+	AluJr	SINE/Alu	14	280	(32)	1871505
2242	12.8	0.6	0.6	chr19	40623162	40623474	(17994142)	C	AluSq2	SINE/Alu	(0)	313	1	1871535
42	0.0	0.0	0.0	chr19	40634800	40634837	(17982779)	+	(CAT)n	Simple_repeat	1	38	(0)	1871567
2307	10.2	0.0	0.7	chr19	40634848	40635152	(17982464)	+	AluSx1	SINE/Alu	1	303	(9)	1871568
761	27.0	6.5	0.9	chr19	40651606	40651822	(17965794)	C	MLT1G1	LTR/ERVL-MaLR	(344)	235	6	1871615
2195	13.0	0.0	0.3	chr19	40652053	40652360	(17965256)	C	AluSz	SINE/Alu	(5)	307	1	1871619
2053	12.8	2.3	0.7	chr19	40657336	40657633	(17959983)	C	AluSx1	SINE/Alu	(9)	303	1	1871637
19	15.1	0.0	0.0	chr19	40657634	40657671	(17959945)	+	(TTTGTG)n	Simple_repeat	1	38	(0)	1871638
2097	14.0	0.0	0.3	chr19	40657673	40657972	(17959644)	C	AluJb	SINE/Alu	(13)	299	1	1871639
30	0.0	0.0	0.0	chr19	40715846	40715871	(17901745)	+	(TG)n	Simple_repeat	1	26	(0)	1871775
17	20.8	3.0	4.4	chr19	40799446	40799511	(17818105)	+	G-rich	Low_complexity	1	68	(0)	1871993
2192	11.4	0.7	0.7	chr19	40832260	40832557	(17785059)	+	AluSx1	SINE/Alu	2	299	(13)	1872046
351	29.9	10.1	3.0	chr19	40832558	40832760	(17784856)	+	MIRb	SINE/MIR	30	248	(20)	1872047
2250	11.0	0.3	0.0	chr19	40855668	40855958	(17761658)	C	AluSz	SINE/Alu	(20)	292	1	1872093
834	13.8	18.8	0.0	chr19	40855960	40856119	(17761497)	C	MSTA	LTR/ERVL-MaLR	(231)	197	1	1872094
2144	10.6	0.7	0.0	chr19	40904594	40904877	(17712739)	+	AluSc	SINE/Alu	6	291	(18)	1872209
224	35.2	0.0	0.0	chr19	40904958	40905028	(17712588)	C	L2b	LINE/L2	(61)	3314	3244	1872210
1368	22.0	6.3	4.3	chr19	40905335	40905556	(17712060)	C	L1MB8	LINE/L1	(0)	6178	5943	1872211
2220	11.5	0.0	0.0	chr19	40905557	40905851	(17711765)	C	AluSx1	SINE/Alu	(17)	295	1	1872212
456	25.0	9.1	1.6	chr19	40920860	40920981	(17696635)	+	MIR	SINE/MIR	81	212	(50)	1872237
20	29.2	1.6	0.0	chr19	40963687	40963748	(17653868)	+	(AC)n	Simple_repeat	1	63	(0)	1872325
12	3.6	10.0	3.0	chr19	40963870	40963899	(17653717)	+	GA-rich	Low_complexity	1	33	(0)	1872326
1058	28.9	11.8	5.0	chr19	41065020	41065405	(17552211)	+	MLT1J	LTR/ERVL-MaLR	6	435	(77)	1872531
1899	10.4	4.1	0.4	chr19	41144177	41144455	(17473161)	+	AluSg7	SINE/Alu	3	292	(17)	1872693
204	17.0	6.0	0.0	chr19	41144526	41144572	(17473044)	C	MIRb	SINE/MIR	(169)	99	50	1872694
246	21.7	2.5	19.6	chr19	41144642	41144715	(17472901)	C	MIR	SINE/MIR	(0)	262	203	1872695
2131	9.3	0.0	5.0	chr19	41144716	41145036	(17472580)	C	AluSx3	SINE/Alu	(6)	305	1	1872696
35	19.6	0.0	1.4	chr19	41218733	41218804	(17398812)	+	(TG)n	Simple_repeat	1	72	(0)	1872914
15	14.9	2.6	2.5	chr19	41218857	41218895	(17398721)	+	(GGCTGG)n	Simple_repeat	1	40	(0)	1872915
16	14.4	2.5	2.4	chr19	41218943	41218982	(17398634)	+	(CCAGAGC)n	Simple_repeat	1	41	(0)	1872916
17	30.2	0.0	1.8	chr19	41225808	41225862	(17391754)	+	(TG)n	Simple_repeat	1	55	(0)	1872925
206	32.7	0.6	0.3	chr19	41230179	41230238	(17387378)	+	(TG)n	Simple_repeat	1	61	(0)	1872936
28	6.8	0.0	4.0	chr19	41230239	41230288	(17387328)	+	(TGTGTGTGAC)n	Simple_repeat	1	50	(0)	1872937
206	32.7	0.6	0.3	chr19	41230289	41230681	(17386935)	+	(TG)n	Simple_repeat	2	397	(0)	1872938
28	5.1	0.0	4.4	chr19	41230682	41230726	(17386890)	+	(TGTGTGTGCC)n	Simple_repeat	1	45	(0)	1872939
206	32.7	0.6	0.3	chr19	41230727	41230744	(17386872)	+	(TG)n	Simple_repeat	2	19	(0)	1872940
340	30.1	0.0	11.7	chr19	41299891	41300052	(17317564)	C	MIRb	SINE/MIR	(3)	265	123	1873095
339	28.0	16.2	0.0	chr19	41300117	41300299	(17317317)	C	MIRb	SINE/MIR	(11)	257	35	1873096
23	18.7	0.0	0.0	chr19	41352982	41353030	(17264586)	+	(CAGCAG)n	Simple_repeat	1	49	(0)	1873223
868	27.3	9.6	2.1	chr19	41366271	41366607	(17251009)	+	L2	LINE/L2	2558	2922	(497)	1873255
1109	9.2	0.0	0.0	chr19	41366617	41366757	(17250859)	C	AluSx	SINE/Alu	(170)	142	2	1873256
729	18.3	12.8	1.0	chr19	41570996	41571188	(17046428)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1873610
2520	15.6	5.1	1.8	chr19	41801438	41802128	(16815488)	C	LTR8B	LTR/ERV1	(0)	820	1	1873940
125	36.0	3.8	0.9	chr19	41914227	41915007	(16702609)	+	(CTCT)n	Simple_repeat	1	811	(0)	1874164
22	17.9	2.3	0.0	chr19	41921484	41921527	(16696089)	+	GA-rich	Low_complexity	1	45	(0)	1874175
2379	10.5	0.3	0.0	chr19	41961254	41961558	(16656058)	C	AluSg	SINE/Alu	(4)	306	1	1874257
57	0.0	0.0	0.0	chr19	41993502	41993550	(16624066)	+	(CA)n	Simple_repeat	1	49	(0)	1874330
13	19.4	0.0	8.9	chr19	41995134	41995189	(16622427)	+	(ATCTCAC)n	Simple_repeat	1	56	(0)	1874332
839	17.6	22.1	1.6	chr19	42028318	42028752	(16588864)	+	LTR50	LTR/ERVL	19	655	(140)	1874407
689	20.3	5.9	0.7	chr19	42028754	42028897	(16588719)	+	MER58A	DNA/hAT-Charlie	2	153	(71)	1874408
993	26.9	7.4	2.0	chr19	42032266	42032622	(16584994)	+	L1ME3G	LINE/L1	169	546	(378)	1874420
662	28.4	14.5	8.7	chr19	42032624	42032989	(16584627)	+	L2b	LINE/L2	2407	2823	(596)	1874421
2258	8.6	2.7	0.7	chr19	42034989	42035280	(16582336)	C	AluSp	SINE/Alu	(15)	298	1	1874427
425	26.2	4.7	0.0	chr19	42035284	42035405	(16582211)	+	L1ME3G	LINE/L1	547	674	(250)	1874420
17	15.6	2.1	4.2	chr19	42133305	42133351	(16484265)	+	(CCCCT)n	Simple_repeat	1	48	(0)	1874651
19	24.6	3.2	0.0	chr19	42176300	42176361	(16441255)	+	(TTTTAT)n	Simple_repeat	1	64	(0)	1874735
14	8.4	15.4	1.7	chr19	42176474	42176525	(16441091)	+	(CTCCG)n	Simple_repeat	1	60	(0)	1874736
17	16.5	4.1	2.0	chr19	42269438	42269486	(16348130)	+	G-rich	Low_complexity	1	51	(0)	1874929
16	14.2	5.1	0.0	chr19	42269795	42269833	(16347783)	+	(AGAGAT)n	Simple_repeat	1	41	(0)	1874930
314	31.9	7.1	9.3	chr19	42279323	42279612	(16338004)	C	L2c	LINE/L2	(122)	3253	2971	1874949
13	23.8	2.2	2.1	chr19	42279814	42279859	(16337757)	+	GA-rich	Low_complexity	1	47	(0)	1874950
12	28.5	4.6	1.5	chr19	42280618	42280682	(16336934)	+	(GCCG)n	Simple_repeat	1	68	(0)	1874952
18	23.3	5.2	1.6	chr19	42283181	42283238	(16334378)	+	(TG)n	Simple_repeat	1	61	(0)	1874955
13	21.3	2.6	0.0	chr19	42283539	42283576	(16334040)	+	(AGTGTG)n	Simple_repeat	1	39	(0)	1874956
49	0.0	0.0	0.0	chr19	42303065	42303106	(16314510)	+	(GT)n	Simple_repeat	1	42	(0)	1874978
12	12.8	5.6	2.6	chr19	42325733	42325768	(16291848)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1875034
1936	14.4	0.0	1.7	chr19	42450818	42451109	(16166507)	+	AluJo	SINE/Alu	2	288	(24)	1875306
603	19.0	4.2	20.2	chr19	42451147	42451344	(16166272)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	1875307
27866	3.3	0.1	0.4	chr19	43242053	43248105	(15369511)	C	L1PA3	LINE/L1	(0)	6328	297	1876423
7791	8.7	0.2	0.1	chr19	43274230	43275235	(15342381)	C	LTR13	LTR/ERVK	(0)	1007	1	1876460
12	22.4	0.0	2.6	chr19	43331522	43331559	(15286057)	+	G-rich	Low_complexity	1	38	(0)	1876517
78	30.8	0.0	0.4	chr19	43331707	43331939	(15285677)	+	(CA)n	Simple_repeat	1	233	(0)	1876518
929	25.7	13.7	2.6	chr19	43331944	43332395	(15285221)	C	LTR54	LTR/ERV1	(0)	510	1	1876519
47	4.2	0.0	0.0	chr19	43333018	43333066	(15284550)	+	(TG)n	Simple_repeat	1	49	(0)	1876520
2191	11.0	1.0	0.0	chr19	43420771	43421061	(15196555)	+	AluSq2	SINE/Alu	1	294	(19)	1876700
3166	15.3	11.4	5.4	chr19	43421062	43421267	(15196349)	+	MER4CL34	LTR/ERV1	449	648	(117)	1876699
11	17.4	0.0	5.6	chr19	43503931	43503966	(15113650)	+	(CTGCCT)n	Simple_repeat	1	36	(0)	1876955
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
12	15.8	0.0	3.3	chr19	43664907	43664936	(14952680)	+	(ATAC)n	Simple_repeat	1	30	(0)	1877365
32	38.5	4.0	2.1	chr19	43664974	43665115	(14952501)	+	G-rich	Low_complexity	1	194	(142)	1877366
13	23.6	0.0	10.1	chr19	43665116	43665194	(14952422)	+	(GTTGG)n	Simple_repeat	1	79	(0)	1877367
32	38.5	4.0	2.1	chr19	43665195	43665296	(14952320)	+	G-rich	Low_complexity	195	336	(0)	1877366
15	0.0	8.0	0.0	chr19	43667697	43667721	(14949895)	+	(GGAGA)n	Simple_repeat	1	27	(0)	1877376
287	21.4	13.2	0.0	chr19	43670480	43670591	(14947025)	+	L1MC5a	LINE/L1	2446	2574	(203)	1877381
326	26.2	4.8	0.0	chr19	43670624	43670703	(14946913)	+	L2a	LINE/L2	3340	3423	(3)	1877382
1565	7.2	4.2	2.4	chr19	43670766	43670973	(14946643)	+	AluSc	SINE/Alu	97	308	(1)	1877383
16	15.9	5.7	0.0	chr19	43692549	43692583	(14925033)	+	(AC)n	Simple_repeat	1	37	(0)	1877449
1290	18.9	0.0	3.4	chr19	43692743	43692975	(14924641)	+	AluJb	SINE/Alu	87	311	(1)	1877450
766	29.6	9.3	6.9	chr19	43701271	43701659	(14915957)	C	L2a	LINE/L2	(3)	3423	3025	1877470
1013	15.8	0.0	6.6	chr19	43701680	43701862	(14915754)	+	AluJr	SINE/Alu	1	171	(141)	1877471
403	32.7	7.6	3.5	chr19	43757235	43757379	(14860237)	C	MIRb	SINE/MIR	(125)	143	2	1877598
499	27.5	3.3	12.6	chr19	43757439	43757570	(14860046)	C	L1MC	LINE/L1	(2064)	5818	5708	1877600
1732	16.1	1.4	0.4	chr19	43757571	43757850	(14859766)	C	AluJr	SINE/Alu	(4)	308	26	1877601
2522	8.1	0.0	0.0	chr19	43778230	43778538	(14839078)	C	AluY	SINE/Alu	(2)	309	1	1877654
2466	9.3	0.0	0.3	chr19	43783325	43783637	(14833979)	C	AluSx	SINE/Alu	(0)	312	1	1877662
29	2.8	2.8	0.0	chr19	43783687	43783722	(14833894)	+	(TCTCTCTG)n	Simple_repeat	1	37	(0)	1877663
467	24.5	1.9	0.9	chr19	43785559	43785665	(14831951)	C	L2a	LINE/L2	(27)	3399	3292	1877666
2132	9.4	0.7	0.0	chr19	43799265	43799541	(14818075)	C	AluSx3	SINE/Alu	(32)	279	1	1877712
7858	7.1	3.9	0.5	chr19	43823796	43825326	(14792290)	+	L1PB1	LINE/L1	4262	5851	(300)	1877778
362	28.8	6.0	2.5	chr19	43950771	43950930	(14666686)	+	L2	LINE/L2	632	797	(2622)	1877971
390	27.7	5.7	0.7	chr19	43951581	43951729	(14665887)	+	MIR	SINE/MIR	83	239	(23)	1877972
275	35.3	3.8	4.3	chr19	44003235	44003444	(14614172)	+	MIRb	SINE/MIR	28	236	(26)	1878041
14	12.7	0.0	0.0	chr19	44025683	44025708	(14591908)	+	(TTGT)n	Simple_repeat	1	26	(0)	1878072
336	30.0	5.9	0.6	chr19	44052370	44052530	(14565086)	+	MIR	SINE/MIR	73	242	(20)	1878121
470	21.7	0.9	0.0	chr19	44052556	44052661	(14564955)	C	L1MC4	LINE/L1	(7)	8035	7929	1878122
3483	8.6	1.6	0.4	chr19	44071041	44071520	(14546096)	+	LTR19A	LTR/ERV1	1	486	(0)	1878150
250	28.6	6.0	2.3	chr19	44072499	44072627	(14544989)	+	MIR	SINE/MIR	91	224	(38)	1878152
3328	12.6	7.9	3.1	chr19	44111865	44112444	(14505172)	C	LTR9	LTR/ERV1	(0)	612	3	1878223
14	15.8	0.0	5.1	chr19	44212678	44212716	(14404900)	+	(GAGGCC)n	Simple_repeat	1	39	(0)	1878386
481	27.7	2.8	0.0	chr19	44212780	44212916	(14404700)	+	MIR	SINE/MIR	95	235	(27)	1878387
2394	9.4	0.7	0.3	chr19	44259489	44259797	(14357819)	C	AluSg	SINE/Alu	(0)	310	1	1878455
49	4.9	1.5	1.5	chr19	44544177	44544242	(14073374)	+	(ATCC)n	Simple_repeat	1	67	(0)	1878947
140	23.4	1.2	1.5	chr19	44582590	44582926	(14034690)	+	GA-rich	Low_complexity	1	341	(0)	1879041
233	22.4	0.0	0.0	chr19	44588476	44588524	(14029092)	C	MamRep137	DNA/TcMar-Tigger	(461)	49	1	1879054
957	21.1	23.8	7.0	chr19	44588556	44589012	(14028604)	+	MLT1F2	LTR/ERVL-MaLR	28	560	(0)	1879055
304	28.4	15.6	3.1	chr19	45177869	45178064	(13439552)	C	MIRb	SINE/MIR	(0)	268	44	1880621
493	26.8	4.3	3.5	chr19	45424530	45424908	(13192708)	C	L1ME3G	LINE/L1	(769)	5377	5059	1881265
2000	7.8	2.4	7.8	chr19	45424911	45425217	(13192399)	C	AluSq2	SINE/Alu	(1)	312	23	1881266
2362	7.7	1.3	1.9	chr19	45450488	45450799	(13166817)	+	AluSx	SINE/Alu	1	310	(2)	1881347
803	0.0	0.0	0.0	chr19	45478602	45478687	(13138929)	C	tRNA-SeC(e)-TGA	tRNA	(3)	86	1	1881421
2388	8.4	0.3	0.0	chr19	45630273	45630570	(12987046)	+	AluSx3	SINE/Alu	2	300	(11)	1881837
398	30.1	8.6	4.5	chr19	45630599	45630842	(12986774)	C	ORSL-2b	DNA/hAT-Tip100	(70)	438	173	1881838
47	26.9	5.2	4.9	chr19	45668352	45668659	(12948957)	+	(GTCTCT)n	Simple_repeat	1	324	(0)	1881954
506	29.7	5.1	1.6	chr19	45722298	45722485	(12895131)	+	MIR	SINE/MIR	35	229	(33)	1882089
2508	3.9	0.0	0.0	chr19	45722492	45722775	(12894841)	+	AluY	SINE/Alu	12	295	(16)	1882090
2037	13.9	2.6	0.3	chr19	45722779	45723080	(12894536)	+	AluSx1	SINE/Alu	1	309	(3)	1882091
2051	14.3	0.3	0.0	chr19	45801479	45801772	(12815844)	+	AluSz	SINE/Alu	1	295	(17)	1882283
34	7.5	0.0	0.0	chr19	45801794	45801836	(12815780)	+	(CA)n	Simple_repeat	1	43	(0)	1882284
924	30.4	4.8	5.4	chr19	45862394	45862941	(12754675)	C	L2b	LINE/L2	(1)	3374	2823	1882441
16	0.0	0.0	0.0	chr19	45863114	45863133	(12754483)	+	(CCG)n	Simple_repeat	1	20	(0)	1882442
591	24.4	5.2	2.4	chr19	45927752	45927919	(12689697)	+	LTR67B	LTR/ERVL	2	174	(446)	1882602
246	28.9	4.0	2.0	chr19	45928008	45928106	(12689510)	+	LTR67B	LTR/ERVL	412	512	(108)	1882602
99	26.7	0.3	0.3	chr19	45958354	45958681	(12658935)	+	(TG)n	Simple_repeat	1	328	(0)	1882682
23	10.0	0.0	0.0	chr19	45972664	45972696	(12644920)	+	(CA)n	Simple_repeat	1	33	(0)	1882720
11	20.6	2.9	0.0	chr19	45999954	45999987	(12617629)	+	(GAGGCA)n	Simple_repeat	1	35	(0)	1882798
2051	9.9	5.2	3.3	chr19	46262686	46262988	(12354628)	+	AluSz	SINE/Alu	3	311	(1)	1883226
258	14.8	3.3	20.7	chr19	46262989	46263050	(12354566)	C	LTR24B	LTR/ERV1	(448)	128	70	1883225
14	10.4	6.5	0.0	chr19	46263173	46263203	(12354413)	+	GA-rich	Low_complexity	1	33	(0)	1883227
572	25.8	7.8	2.6	chr19	46389573	46389767	(12227849)	C	L1MC5	LINE/L1	(421)	8883	8678	1883530
12	29.1	0.0	6.9	chr19	46389807	46389878	(12227738)	+	(CCCTCC)n	Simple_repeat	1	72	(0)	1883533
18	21.3	3.2	3.1	chr19	46389909	46389971	(12227645)	+	(TCTCTG)n	Simple_repeat	1	65	(0)	1883534
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
419	29.0	0.0	7.1	chr19	46546647	46546787	(12070829)	C	MLT1J2	LTR/ERVL-MaLR	(289)	159	29	1883967
849	16.9	1.7	0.0	chr19	46571447	46571623	(12045993)	C	MER53	DNA/hAT	(12)	181	2	1884020
2421	9.3	0.0	0.0	chr19	46571784	46572084	(12045532)	C	AluSx4	SINE/Alu	(9)	301	1	1884021
29	27.5	1.7	3.4	chr19	46634838	46634953	(11982663)	+	GA-rich	Low_complexity	1	118	(0)	1884158
207	27.0	0.8	6.4	chr19	46717573	46717668	(11899948)	C	MIR1_Amn	SINE/MIR	(29)	179	88	1884380
948	25.2	10.2	2.5	chr19	46766476	46767066	(11850550)	C	L2a	LINE/L2	(203)	3223	2573	1884482
1545	23.6	7.5	4.6	chr19	46770761	46771218	(11846398)	C	MERX	DNA/TcMar-Tigger	(82)	674	198	1884497
1717	15.0	1.7	7.2	chr19	46771219	46771351	(11846265)	+	AluJb	SINE/Alu	1	126	(186)	1884500
1832	14.3	1.8	0.4	chr19	46785105	46785383	(11832233)	+	AluJb	SINE/Alu	6	288	(24)	1884536
788	23.6	7.7	2.7	chr19	46785389	46785610	(11832006)	C	MIR	SINE/MIR	(1)	261	28	1884537
14	30.0	1.9	0.0	chr19	46787632	46787684	(11829932)	+	(AGC)n	Simple_repeat	1	54	(0)	1884539
17	22.8	5.9	1.4	chr19	46787722	46787789	(11829827)	+	(CCACCG)n	Simple_repeat	1	72	(0)	1884540
16	19.3	2.2	4.3	chr19	46860826	46860870	(11756746)	+	(CG)n	Simple_repeat	1	46	(0)	1884769
22	6.6	0.0	0.0	chr19	46860910	46860941	(11756675)	+	(GAGG)n	Simple_repeat	1	32	(0)	1884770
32	0.0	0.0	0.0	chr19	47035192	47035221	(11582395)	+	(AAG)n	Simple_repeat	1	30	(0)	1885120
64	2.4	6.9	0.0	chr19	47048969	47049055	(11568561)	+	(TCTT)n	Simple_repeat	1	93	(0)	1885144
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
15	12.0	0.0	3.3	chr19	47112359	47112388	(11505228)	+	(CCT)n	Simple_repeat	1	30	(0)	1885279
29	30.4	2.4	1.6	chr19	47112440	47112563	(11505053)	+	(GGC)n	Simple_repeat	1	127	(0)	1885280
17	18.7	3.3	4.8	chr19	47113141	47113200	(11504416)	+	(GAGGCG)n	Simple_repeat	1	62	(0)	1885281
12	22.4	0.0	6.4	chr19	47130933	47130979	(11486637)	+	GA-rich	Low_complexity	1	47	(0)	1885344
2386	8.2	0.7	0.0	chr19	47131695	47131998	(11485618)	C	AluSx1	SINE/Alu	(4)	308	3	1885345
1726	13.7	0.0	0.4	chr19	47132013	47132261	(11485355)	C	AluSz	SINE/Alu	(63)	249	2	1885346
2025	12.0	3.4	0.0	chr19	47141019	47141301	(11476315)	C	AluSz6	SINE/Alu	(19)	293	1	1885376
2050	10.2	2.1	3.7	chr19	47141302	47141440	(11476176)	C	AluSx1	SINE/Alu	(179)	133	2	1885375
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
185	25.4	3.5	3.5	chr19	47418003	47418059	(11199557)	+	MIRb	SINE/MIR	189	245	(23)	1886116
1171	26.7	6.8	13.2	chr19	47438912	47439245	(11178371)	+	MLT1J2	LTR/ERVL-MaLR	4	359	(89)	1886162
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
418	31.9	1.3	1.3	chr19	47472429	47472458	(11145158)	+	SVA_A	Retroposon/SVA	154	182	(1205)	1886248
257	9.7	6.9	3.3	chr19	47490006	47490571	(11127045)	+	(TG)n	Simple_repeat	1	605	(0)	1886282
15	14.4	2.4	4.7	chr19	47608664	47608705	(11008911)	+	G-rich	Low_complexity	1	43	(0)	1886567
374	33.0	4.4	6.2	chr19	47723001	47723275	(10894341)	+	L2b	LINE/L2	3077	3346	(29)	1886880
2269	8.2	2.0	0.3	chr19	47723380	47723673	(10893943)	+	AluSc	SINE/Alu	1	299	(10)	1886881
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
278	25.8	0.6	0.8	chr19	48011102	48011801	(10605815)	+	(ATG)n	Simple_repeat	1	704	(0)	1887697
2508	6.5	0.0	0.3	chr19	48320955	48321264	(10296352)	+	AluSz	SINE/Alu	1	309	(3)	1888469
17	24.9	1.9	0.0	chr19	48330472	48330523	(10287093)	+	(CGCCC)n	Simple_repeat	1	53	(0)	1888485
785	25.5	10.9	2.0	chr19	48351326	48351849	(10265767)	+	L2a	LINE/L2	2629	3222	(204)	1888537
2289	8.6	0.3	5.2	chr19	48400784	48401110	(10216506)	+	AluSx	SINE/Alu	1	311	(1)	1888662
12	8.4	0.0	6.9	chr19	48418653	48418681	(10198935)	+	G-rich	Low_complexity	1	29	(0)	1888711
312	21.4	1.4	0.3	chr19	48548166	48548854	(10068762)	+	(TGGA)n	Simple_repeat	1	699	(0)	1889028
13	30.2	0.0	4.5	chr19	48634580	48634645	(9982971)	+	(CCCGCC)n	Simple_repeat	1	66	(0)	1889251
18	11.7	8.0	3.7	chr19	48645813	48645862	(9971754)	+	(CT)n	Simple_repeat	1	54	(0)	1889271
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
442	34.6	2.6	6.4	chr19	48654445	48654800	(9962816)	+	L2c	LINE/L2	2810	3230	(157)	1889301
673	19.4	4.3	6.1	chr19	48674986	48675150	(9942466)	+	MIR	SINE/MIR	37	198	(64)	1889341
337	31.3	4.6	2.4	chr19	48675227	48675396	(9942220)	C	MER46C	DNA/TcMar-Tigger	(86)	252	79	1889342
25	12.8	3.9	0.0	chr19	48716738	48716788	(9900828)	+	GA-rich	Low_complexity	1	53	(0)	1889456
2257	6.8	0.3	7.1	chr19	48811958	48812147	(9805469)	+	AluSx1	SINE/Alu	137	305	(7)	1889667
200	11.8	2.9	0.0	chr19	48823003	48823036	(9794580)	C	L2a	LINE/L2	(76)	3350	3316	1889696
509	27.8	2.2	0.0	chr19	48823037	48823212	(9794404)	+	L1MC5a	LINE/L1	2367	2546	(231)	1889697
298	21.0	6.9	1.2	chr19	48872685	48872766	(9744850)	C	MSR1	Satellite	(18)	93	7	1889835
15	21.0	1.8	5.4	chr19	48954872	48954926	(9662690)	+	(GGC)n	Simple_repeat	1	56	(0)	1890063
14	18.9	4.5	2.2	chr19	48993563	48993606	(9624010)	+	GA-rich	Low_complexity	1	46	(0)	1890139
432	20.8	3.5	2.8	chr19	48993947	48994158	(9623458)	C	MSR1	Satellite	(13)	213	1	1890140
26	11.2	0.0	0.0	chr19	49021405	49021443	(9596173)	+	(GA)n	Simple_repeat	1	39	(0)	1890205
21	7.6	0.0	0.0	chr19	49021443	49021470	(9596146)	+	(GT)n	Simple_repeat	1	28	(0)	1890206
25	8.3	0.0	0.0	chr19	49021536	49021573	(9596043)	+	(AGAG)n	Simple_repeat	1	38	(0)	1890207
24	6.6	0.0	0.0	chr19	49021573	49021604	(9596012)	+	(GT)n	Simple_repeat	1	32	(0)	1890208
2358	10.4	0.7	0.0	chr19	49074253	49074561	(9543055)	C	AluSq4	SINE/Alu	(0)	311	1	1890307
1144	11.4	1.9	0.0	chr19	49074565	49074722	(9542894)	C	AluSx1	SINE/Alu	(10)	302	142	1890308
295	31.5	9.1	8.7	chr19	49113885	49114103	(9503513)	+	L2b	LINE/L2	3153	3372	(3)	1890404
13	27.6	1.7	3.3	chr19	49114529	49114588	(9503028)	+	(GCGG)n	Simple_repeat	1	61	(0)	1890412
16	8.5	0.0	0.0	chr19	49115007	49115031	(9502585)	+	(TCC)n	Simple_repeat	1	25	(0)	1890413
13	17.2	3.9	5.7	chr19	49119142	49119192	(9498424)	+	(TCCCGCC)n	Simple_repeat	1	53	(0)	1890418
1735	16.0	2.6	4.4	chr19	49121814	49121935	(9495681)	C	AluJb	SINE/Alu	(190)	122	2	1890421
2373	8.2	0.3	0.7	chr19	49122079	49122381	(9495235)	C	AluSp	SINE/Alu	(11)	302	1	1890424
13	21.9	2.3	2.2	chr19	49128571	49128614	(9489002)	+	(CCCTCTT)n	Simple_repeat	1	45	(0)	1890439
334	30.9	1.1	1.1	chr19	49145667	49145761	(9471855)	C	MIRb	SINE/MIR	(139)	129	35	1890472
495	34.3	4.6	2.5	chr19	49301076	49301371	(9316245)	+	L1M3c	LINE/L1	597	1030	(5749)	1890824
2373	7.4	0.0	4.9	chr19	49495609	49495933	(9121683)	C	AluSx1	SINE/Alu	(3)	309	1	1891222
51	0.0	0.0	0.0	chr19	49659985	49660028	(8957588)	+	(AC)n	Simple_repeat	1	44	(0)	1891634
32	3.2	0.0	0.0	chr19	49660080	49660111	(8957505)	+	(AC)n	Simple_repeat	1	32	(0)	1891634
12	14.1	3.0	2.9	chr19	49818246	49818278	(8799338)	+	(CGCGCG)n	Simple_repeat	1	34	(0)	1892011
2357	10.9	0.3	0.0	chr19	49865602	49865912	(8751704)	C	AluSx1	SINE/Alu	(0)	312	1	1892093
1929	12.2	4.3	0.0	chr19	49866012	49866299	(8751317)	C	AluJb	SINE/Alu	(11)	301	1	1892094
411	29.5	7.2	0.0	chr19	49867868	49867996	(8749620)	+	MIR	SINE/MIR	103	241	(21)	1892095
2382	4.0	0.0	0.4	chr19	49868004	49868279	(8749337)	C	AluY	SINE/Alu	(9)	302	28	1892096
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
383	24.9	11.5	4.5	chr19	50134034	50134235	(8483381)	C	L2a	LINE/L2	(151)	3275	3058	1892735
2284	10.4	0.6	2.5	chr19	50134247	50134562	(8483054)	+	AluSg	SINE/Alu	1	310	(0)	1892736
469	19.5	16.7	1.0	chr19	50134565	50134773	(8482843)	C	MER33	DNA/hAT-Charlie	(82)	242	1	1892737
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
383	24.9	11.5	4.5	chr19	50139407	50139608	(8478008)	C	L2a	LINE/L2	(151)	3275	3058	1892751
2327	10.1	0.3	2.5	chr19	50139620	50139936	(8477680)	+	AluSg	SINE/Alu	1	310	(0)	1892752
19	0.0	0.0	0.0	chr19	50312303	50312323	(8305293)	+	(TG)n	Simple_repeat	1	21	(0)	1893255
12	22.1	0.0	0.0	chr19	50312324	50312334	(8305282)	+	G-rich	Low_complexity	1	32	(0)	1893256
2154	11.6	1.7	0.0	chr19	50316460	50316751	(8300865)	+	AluSx1	SINE/Alu	2	298	(14)	1893260
20	17.3	4.3	0.0	chr19	50328819	50328865	(8288751)	+	(GCC)n	Simple_repeat	1	49	(0)	1893279
36	28.6	4.1	0.7	chr19	50328884	50329029	(8288587)	+	(CGG)n	Simple_repeat	1	152	(0)	1893280
2332	11.5	0.0	0.0	chr19	50329985	50330296	(8287320)	+	AluSx1	SINE/Alu	1	312	(0)	1893283
17	19.8	3.7	1.8	chr19	50455899	50455952	(8161664)	+	(TTTATCT)n	Simple_repeat	1	56	(0)	1893561
268	22.8	1.0	0.9	chr19	50455950	50456421	(8161195)	+	(ATCC)n	Simple_repeat	1	471	(0)	1893562
1888	15.6	0.3	0.0	chr19	50607028	50607316	(8010300)	C	AluSz	SINE/Alu	(22)	290	1	1893905
1650	15.6	4.9	0.8	chr19	50645619	50645874	(7971742)	+	AluJb	SINE/Alu	23	289	(23)	1893998
13	13.6	4.3	6.2	chr19	50725315	50725360	(7892256)	+	(GCCCA)n	Simple_repeat	1	48	(0)	1894171
12	20.6	6.7	0.0	chr19	51366809	51366853	(7250763)	+	(TCCCTA)n	Simple_repeat	1	48	(0)	1895482
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
1495	27.8	1.2	1.9	chr19	51905172	51905603	(6712013)	C	MER57F	LTR/ERV1	(6)	429	1	1896458
43	2.5	0.0	0.0	chr19	53521322	53521362	(5096254)	+	(GT)n	Simple_repeat	1	41	(0)	1899508
34	0.0	0.0	0.0	chr19	53980058	53980086	(4637530)	+	(GT)n	Simple_repeat	1	29	(0)	1900731
15	23.2	0.0	0.0	chr19	53980087	53980114	(4637502)	+	(GC)n	Simple_repeat	1	28	(0)	1900732
1874	12.7	2.0	2.3	chr19	54200327	54200626	(4416990)	+	AluJb	SINE/Alu	1	299	(13)	1901299
2154	10.8	1.0	2.9	chr19	54448652	54448966	(4168650)	+	AluSg	SINE/Alu	1	309	(1)	1901778
2096	12.8	1.0	0.0	chr19	55118037	55118340	(3499276)	C	AluSc	SINE/Alu	(1)	308	2	1903034
2064	7.0	1.5	0.0	chr19	55141524	55141779	(3475837)	C	AluSq2	SINE/Alu	(53)	260	1	1903090
358	27.7	8.3	2.5	chr19	55262011	55262169	(3355447)	C	MLT1N2	LTR/ERVL-MaLR	(387)	175	7	1903333
196	29.7	1.5	1.5	chr19	55280120	55280184	(3337432)	C	OldhAT1	DNA/hAT-Ac	(750)	2098	2034	1903374
47	2.1	2.1	0.0	chr19	55281120	55281167	(3336449)	+	(TG)n	Simple_repeat	1	49	(0)	1903376
1993	18.4	9.6	0.2	chr19	55281215	55281649	(3335967)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	26	1903377
18	32.9	3.2	0.0	chr19	55283867	55283960	(3333656)	+	(CCCTCCC)n	Simple_repeat	1	97	(0)	1903384
564	26.6	9.2	0.0	chr19	55338695	55338912	(3278704)	+	Tigger3c	DNA/TcMar-Tigger	363	602	(0)	1903538
16	4.5	0.0	0.0	chr19	55338918	55338940	(3278676)	+	(AAAC)n	Simple_repeat	1	23	(0)	1903539
193	31.4	0.9	2.8	chr19	55519505	55519999	(3097617)	+	(TGA)n	Simple_repeat	2	481	(0)	1903903
16	12.7	0.0	5.3	chr19	55580750	55580787	(3036829)	+	G-rich	Low_complexity	1	38	(0)	1904073
12	13.2	9.3	2.1	chr19	55580979	55581021	(3036595)	+	G-rich	Low_complexity	1	47	(0)	1904074
268	16.9	4.4	5.8	chr19	55581165	55581233	(3036383)	C	L2a	LINE/L2	(0)	3426	3359	1904075
12	19.3	0.0	5.1	chr19	55600208	55600246	(3017370)	+	(GCGG)n	Simple_repeat	1	39	(0)	1904120
19	23.5	0.0	4.6	chr19	55624644	55624708	(2992908)	+	G-rich	Low_complexity	1	65	(0)	1904169
2519	7.4	0.3	0.3	chr19	55634452	55634763	(2982853)	+	AluSz	SINE/Alu	1	312	(0)	1904201
16	0.0	0.0	0.0	chr19	55634771	55634788	(2982828)	+	(T)n	Simple_repeat	1	18	(0)	1904202
987	17.5	0.5	2.1	chr19	55639114	55639306	(2978310)	+	MER20	DNA/hAT-Charlie	1	190	(29)	1904213
2577	4.6	1.3	0.0	chr19	55653385	55653688	(2963928)	+	AluSc8	SINE/Alu	2	309	(2)	1904234
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
14	5.0	0.0	0.0	chr19	56140757	56140777	(2476839)	+	(CTC)n	Simple_repeat	1	21	(0)	1905199
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
875	16.8	6.5	0.0	chr19	56253144	56253286	(2364330)	+	AluJr	SINE/Alu	149	301	(11)	1905469
24	13.1	2.4	0.0	chr19	56508212	56508253	(2109363)	+	(GT)n	Simple_repeat	1	43	(0)	1905912
32	2.9	0.0	0.0	chr19	57104240	57104274	(1513342)	+	(GTTTT)n	Simple_repeat	1	35	(0)	1907209
2033	8.4	0.4	1.1	chr19	57104296	57104556	(1513060)	C	AluSx	SINE/Alu	(53)	259	1	1907210
26	0.0	0.0	0.0	chr19	57363364	57363388	(1254228)	+	(TGCG)n	Simple_repeat	1	25	(0)	1907684
44	3.1	2.7	5.3	chr19	57487527	57487600	(1130016)	+	(ATCTCC)n	Simple_repeat	1	76	(0)	1907880
187	14.4	7.0	0.4	chr19	57499312	57499737	(1117879)	+	(CTCCAT)n	Simple_repeat	1	456	(0)	1907898
910	15.5	4.5	0.0	chr19	57815132	57815279	(802337)	+	FRAM	SINE/Alu	6	160	(16)	1908374
2060	6.1	3.6	3.2	chr19	57819208	57819513	(798103)	C	AluY	SINE/Alu	(0)	311	1	1908382
188	26.7	0.0	0.0	chr19	57849636	57849680	(767936)	C	L2c	LINE/L2	(312)	3075	3031	1908433
17	18.7	6.2	6.8	chr19	58305442	58305538	(312078)	+	(AGTGGTG)n	Simple_repeat	1	103	(0)	1909308
2296	19.6	0.7	0.5	chr19	58305671	58306101	(311515)	+	LTR3	LTR/ERVK	1	432	(0)	1909309
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
2337	7.8	1.0	0.0	chr19	58543417	58543711	(73905)	C	AluSq2	SINE/Alu	(15)	298	1	1909716
564	25.6	0.7	0.0	chr19	58543719	58543855	(73761)	C	AluJb	SINE/Alu	(39)	273	136	1909717
11	24.3	5.5	1.7	chr19	58573164	58573218	(44398)	+	(CCTTCC)n	Simple_repeat	1	58	(0)	1909747
450	18.1	6.8	1.6	chr2	2572350	2573626	(239619903)	+	(CA)n	Simple_repeat	1	1364	(0)	1913432
25	18.7	0.0	4.5	chr2	8837666	8837731	(233355798)	+	G-rich	Low_complexity	1	66	(0)	1921949
13	15.8	2.7	2.6	chr2	9207268	9207304	(232986225)	+	(CCCCCG)n	Simple_repeat	1	38	(0)	1922560
14	4.3	0.0	7.1	chr2	9207543	9207570	(232985959)	+	(CCG)n	Simple_repeat	1	28	(0)	1922561
489	25.2	0.4	1.4	chr2	10311756	10312946	(231880583)	+	(CATCAT)n	Simple_repeat	1	1196	(0)	1924554
2537	6.2	0.0	0.7	chr2	10690133	10690440	(231503089)	+	AluSx1	SINE/Alu	2	307	(5)	1925242
55	0.0	0.0	0.0	chr2	11483688	11483734	(230709795)	+	(GT)n	Simple_repeat	1	47	(0)	1926728
14	15.4	5.6	0.0	chr2	11830175	11830210	(230363319)	+	(GTGA)n	Simple_repeat	1	38	(0)	1927316
12	17.4	0.0	8.7	chr2	23926821	23926866	(218266663)	+	(GGCC)n	Simple_repeat	1	46	(0)	1945110
59	8.1	0.0	0.0	chr2	24084341	24084420	(218109109)	+	(CAGGG)n	Simple_repeat	1	80	(0)	1945480
38	21.6	4.0	6.1	chr2	24491129	24491302	(217702227)	+	(GCGGCG)n	Simple_repeat	1	181	(0)	1946258
12	20.6	2.4	2.4	chr2	25937465	25937505	(216256024)	+	(GGCAGT)n	Simple_repeat	1	42	(0)	1948921
23	16.2	2.0	0.0	chr2	26033766	26033814	(216159715)	+	G-rich	Low_complexity	1	50	(0)	1949188
30	17.0	0.0	0.0	chr2	26245248	26245300	(215948229)	+	(GT)n	Simple_repeat	1	53	(0)	1949599
1889	9.3	0.0	3.2	chr2	27032377	27032655	(215160874)	+	AluSx1	SINE/Alu	1	270	(42)	1951082
15	12.2	0.0	0.0	chr2	27032665	27032691	(215160838)	+	(CAAT)n	Simple_repeat	1	27	(0)	1951083
577	6.8	0.0	0.0	chr2	27051214	27051287	(215142242)	+	tRNA-Ala-GCY	tRNA	1	74	(2)	1951108
17	7.0	3.3	0.0	chr2	27071533	27071562	(215121967)	+	(CCACGG)n	Simple_repeat	1	31	(0)	1951129
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
332	26.0	12.4	3.4	chr2	36403755	36403929	(205789600)	C	L2	LINE/L2	(896)	2523	2331	1966017
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
4234	9.4	2.1	0.3	chr2	38394312	38395041	(203798488)	+	L1PA15	LINE/L1	4752	5488	(677)	1969133
2367	12.0	1.1	0.0	chr2	38395042	38395399	(203798130)	+	L1PA15	LINE/L1	5804	6165	(0)	1969133
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
51	0.0	0.0	0.0	chr2	46151281	46151324	(196042205)	+	(AC)n	Simple_repeat	1	44	(0)	1981803
13	18.9	3.8	3.6	chr2	46151325	46151367	(196042162)	+	(CCTCTC)n	Simple_repeat	4	46	(0)	1981804
785	24.5	8.6	2.3	chr2	46481472	46481688	(195711841)	+	MIRb	SINE/MIR	37	268	(0)	1982324
231	25.8	1.5	0.0	chr2	46481693	46481758	(195711771)	C	L3	LINE/CR1	(713)	3386	3320	1982322
580	29.1	7.0	0.0	chr2	46481770	46481941	(195711588)	C	L3	LINE/CR1	(847)	3252	3068	1982322
192	22.0	10.6	4.8	chr2	46941842	46941903	(195251626)	+	Tigger19a	DNA/TcMar-Tigger	153	218	(105)	1983106
24	12.3	2.3	0.0	chr2	48440801	48440844	(193752685)	+	(GGC)n	Simple_repeat	1	45	(0)	1985972
1962	9.3	0.0	4.8	chr2	48622581	48622850	(193570679)	+	AluSx	SINE/Alu	43	299	(13)	1986316
2454	9.3	0.3	0.0	chr2	54477632	54477921	(187715608)	+	AluSg	SINE/Alu	1	291	(19)	1994433
186	26.2	1.6	0.0	chr2	55115846	55115906	(187077623)	C	L3b	LINE/CR1	(383)	4849	4788	1995318
872	12.9	1.3	0.3	chr2	55116096	55116242	(187077287)	C	FLAM_C	SINE/Alu	(82)	220	9	1995319
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
19	16.6	4.3	0.0	chr2	64524370	64524416	(177669113)	+	(GCGGAG)n	Simple_repeat	1	49	(0)	2009513
23	19.1	0.0	0.0	chr2	65129922	65129969	(177063560)	+	(GCC)n	Simple_repeat	1	48	(0)	2010632
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
15	21.1	2.5	2.4	chr2	66434929	66434968	(175758561)	+	(TG)n	Simple_repeat	1	41	(0)	2012778
30	9.6	2.2	0.0	chr2	66435286	66435331	(175758198)	+	(AG)n	Simple_repeat	1	47	(0)	2012779
211	21.2	0.4	4.3	chr2	68362303	68362367	(173831162)	+	L2c	LINE/L2	3309	3383	(4)	2015504
521	27.9	4.5	3.2	chr2	69023038	69023215	(173170314)	+	MIRb	SINE/MIR	7	192	(76)	2016397
101	25.2	2.8	0.3	chr2	69023257	69023516	(173170013)	+	(GATGGT)n	Simple_repeat	1	266	(0)	2016398
26	0.0	0.0	0.0	chr2	69023517	69023541	(173169988)	+	(GAT)n	Simple_repeat	1	25	(0)	2016399
101	25.2	2.8	0.3	chr2	69023542	69023565	(173169964)	+	(GATGGT)n	Simple_repeat	3	27	(0)	2016400
247	25.4	13.9	4.0	chr2	69893670	69893817	(172299712)	+	L1ME4c	LINE/L1	608	772	(58)	2017954
36	0.0	0.0	0.0	chr2	70124611	70124641	(172068888)	+	(GT)n	Simple_repeat	1	31	(0)	2018442
2530	3.5	0.3	0.0	chr2	70124690	70124974	(172068555)	+	AluYc	SINE/Alu	1	286	(13)	2018443
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
14	14.1	0.0	3.0	chr2	70302019	70302051	(171891478)	+	(CCGCG)n	Simple_repeat	1	33	(0)	2018832
475	26.9	7.8	3.4	chr2	73233800	73234007	(168959522)	+	MIRb	SINE/MIR	19	236	(32)	2023375
361	34.3	9.5	0.7	chr2	74148358	74148636	(168044893)	C	L2	LINE/L2	(589)	2830	2525	2024871
12	8.8	4.2	0.0	chr2	74529647	74529670	(167663859)	+	(CGC)n	Simple_repeat	1	25	(0)	2025528
13	26.3	0.0	0.0	chr2	74654267	74654307	(167539222)	+	(GCCGA)n	Simple_repeat	1	41	(0)	2025740
16	13.8	0.0	8.3	chr2	74654533	74654580	(167538949)	+	(ACGCCC)n	Simple_repeat	1	48	(0)	2025741
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
1357	14.6	2.7	0.8	chr2	84649351	84649606	(157543923)	C	L1MDa	LINE/L1	(4536)	2097	1837	2039269
1084	16.1	17.6	5.9	chr2	84649612	84649935	(157543594)	+	L1PA10	LINE/L1	5788	6157	(11)	2039270
324	30.6	1.1	0.4	chr2	84909186	84910150	(157283379)	+	(ACC)n	Simple_repeat	1	976	(0)	2039639
1793	14.4	7.0	16.8	chr2	85564206	85564453	(156629076)	+	L1MC2	LINE/L1	5920	6174	(170)	2041036
2424	8.2	0.0	0.3	chr2	85564454	85564758	(156628771)	C	AluSq2	SINE/Alu	(8)	305	2	2041038
53	0.0	0.0	0.0	chr2	85742721	85742765	(156450764)	+	(TG)n	Simple_repeat	1	45	(0)	2041418
285	35.9	7.2	2.1	chr2	85742907	85743196	(156450333)	C	L2b	LINE/L2	(9)	3366	3061	2041419
254	18.3	8.9	4.7	chr2	96407669	96407754	(145785775)	+	MIR3	SINE/MIR	65	154	(54)	2052094
11	27.2	2.0	2.0	chr2	97995932	97995981	(144197548)	+	G-rich	Low_complexity	1	51	(0)	2054374
221	25.4	10.1	4.8	chr2	98087458	98087612	(144105917)	C	MIRc	SINE/MIR	(96)	166	8	2054529
97	22.3	1.8	0.0	chr2	100985114	100985342	(141208187)	+	(CATC)n	Simple_repeat	1	233	(0)	2058809
12	4.5	4.0	3.9	chr2	111120579	111120603	(131072926)	+	(GCC)n	Simple_repeat	1	26	(0)	2073127
416	22.8	4.2	0.9	chr2	111699086	111699200	(130494329)	C	L1ME4a	LINE/L1	(205)	5919	5801	2073889
36	0.0	0.0	0.0	chr2	111699386	111699416	(130494113)	+	(AC)n	Simple_repeat	1	31	(0)	2073890
3875	22.4	5.9	7.0	chr2	112259253	112259513	(129934016)	+	ERVL-E-int	LTR/ERVL	4505	4790	(877)	2074805
1058	18.0	5.9	1.0	chr2	112259514	112259721	(129933808)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2074806
3875	22.4	5.9	7.0	chr2	112259722	112260072	(129933457)	+	ERVL-E-int	LTR/ERVL	4791	5145	(522)	2074805
13	14.8	3.9	7.4	chr2	112646173	112646224	(129547305)	+	G-rich	Low_complexity	1	54	(0)	2075482
2112	10.4	1.8	0.0	chr2	113203551	113203859	(128989670)	C	AluSq2	SINE/Alu	(0)	313	1	2076413
344	32.5	5.8	6.6	chr2	113240742	113241195	(128952334)	C	L2b	LINE/L2	(1)	3374	2925	2076473
14	8.4	0.0	3.7	chr2	113756357	113756383	(128437146)	+	(CCTG)n	Simple_repeat	1	27	(0)	2077266
11	16.4	5.9	0.0	chr2	113756428	113756461	(128437068)	+	(CCGCGG)n	Simple_repeat	1	36	(0)	2077267
16	19.5	3.6	3.5	chr2	113756650	113756705	(128436824)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	2077268
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
14	22.8	0.0	0.0	chr2	127526413	127526448	(114667081)	+	(GGCG)n	Simple_repeat	1	36	(0)	2097594
19	17.5	3.6	3.5	chr2	127858082	127858137	(114335392)	+	(CGC)n	Simple_repeat	1	58	(0)	2098144
14	12.2	5.3	2.5	chr2	128091278	128091315	(114102214)	+	(CCTGC)n	Simple_repeat	1	40	(0)	2098653
22	11.8	0.0	4.9	chr2	136248467	136248507	(105945022)	+	(TG)n	Simple_repeat	1	41	(0)	2110393
23	18.2	2.0	0.0	chr2	138060458	138060507	(104133022)	+	(CAT)n	Simple_repeat	1	51	(0)	2112925
245	33.3	0.7	8.2	chr2	138060675	138060821	(104132708)	+	L2c	LINE/L2	3247	3382	(5)	2112926
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
24	13.8	0.0	7.7	chr2	148644625	148644689	(93548840)	+	GA-rich	Low_complexity	1	65	(0)	2126931
21	9.5	0.0	0.0	chr2	151409773	151409806	(90783723)	+	(GGGAA)n	Simple_repeat	1	34	(0)	2130857
2356	8.5	0.0	0.3	chr2	152096204	152096497	(90097032)	+	AluY	SINE/Alu	3	295	(16)	2131854
2021	13.3	1.2	0.3	chr2	158232826	158233157	(83960372)	+	L1MA4	LINE/L1	5955	6289	(11)	2139879
2082	25.1	7.4	3.2	chr2	165825013	165825620	(76367909)	C	HAL1	LINE/L1	(658)	1849	1228	2150186
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
16	19.5	1.9	7.3	chr2	172000139	172000192	(70193337)	+	(AC)n	Simple_repeat	1	55	(0)	2159420
14	26.1	2.9	4.2	chr2	172084655	172084723	(70108806)	+	GA-rich	Low_complexity	1	71	(0)	2159581
838	24.5	1.9	3.3	chr2	172178114	172178324	(70015205)	C	MLT1K	LTR/ERVL-MaLR	(3)	592	385	2159757
363	31.4	9.5	5.5	chr2	172178402	172178654	(70014875)	C	MLT1K	LTR/ERVL-MaLR	(331)	264	1	2159757
48	0.0	0.0	0.0	chr2	172232215	172232255	(69961274)	+	(GT)n	Simple_repeat	1	41	(0)	2159839
33	5.6	0.0	0.0	chr2	172253373	172253409	(69940120)	+	(CA)n	Simple_repeat	1	37	(0)	2159875
2340	27.1	17.3	0.6	chr2	173106505	173107513	(69086016)	C	L2	LINE/L2	(2026)	1393	200	2161147
316	24.8	0.3	0.0	chr2	173697727	173698462	(68495067)	+	(ATCATC)n	Simple_repeat	1	738	(0)	2162046
286	21.7	6.7	4.6	chr2	174487547	174487633	(67705896)	+	MIR	SINE/MIR	5	93	(169)	2163350
680	23.1	10.1	0.3	chr2	175805515	175805712	(66387817)	+	MIR	SINE/MIR	49	258	(4)	2165252
52	2.1	0.0	0.0	chr2	176136151	176136199	(66057330)	+	(AC)n	Simple_repeat	1	49	(0)	2165692
36	22.4	6.3	3.5	chr2	176136222	176136380	(66057149)	+	GA-rich	Low_complexity	1	169	(0)	2165693
234	21.9	14.0	0.0	chr2	176269793	176269871	(65923658)	C	MIR1_Amn	SINE/MIR	(98)	170	83	2165875
50	4.0	0.0	0.0	chr2	176676242	176676293	(65517236)	+	(GT)n	Simple_repeat	1	52	(0)	2166486
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
19	8.2	0.0	0.0	chr2	177242895	177242920	(64950609)	+	(T)n	Simple_repeat	1	26	(0)	2167326
196	28.9	0.0	1.9	chr2	177243002	177243054	(64950475)	C	MamRTE1	LINE/RTE-BovB	(3345)	467	416	2167327
14	25.2	5.0	3.6	chr2	177392828	177392907	(64800622)	+	G-rich	Low_complexity	1	84	(0)	2167595
378	28.1	15.1	5.3	chr2	177905790	177906127	(64287402)	+	LTR88b	LTR/Gypsy?	39	415	(422)	2168268
16	13.2	0.0	0.0	chr2	177906142	177906166	(64287363)	+	(CT)n	Simple_repeat	1	25	(0)	2168269
28	0.0	0.0	0.0	chr2	177906178	177906204	(64287325)	+	(CACG)n	Simple_repeat	1	27	(0)	2168270
1531	18.7	9.2	6.4	chr2	178111735	178112186	(64081343)	+	MER31B	LTR/ERV1	1	466	(0)	2168565
11	13.3	5.7	2.7	chr2	180006996	180007030	(62186499)	+	(CCACCCG)n	Simple_repeat	1	37	(0)	2170943
3763	13.9	20.9	1.7	chr2	195695177	195695560	(46497969)	C	L1PB1	LINE/L1	(5857)	1006	625	2191348
1033	14.6	3.0	0.0	chr2	195695553	195695744	(46497785)	C	L1PB1	LINE/L1	(6663)	200	3	2191348
302	35.9	2.0	6.2	chr2	196068201	196068411	(46125118)	C	MIRc	SINE/MIR	(63)	205	4	2191849
3241	14.5	1.8	1.4	chr2	200199608	200200382	(41993147)	+	L1PBa	LINE/L1	620	1541	(5321)	2197969
2480	7.0	0.7	0.0	chr2	200887776	200888074	(41305455)	+	AluSx1	SINE/Alu	2	302	(10)	2199068
544	31.8	11.0	1.6	chr2	200888139	200888442	(41305087)	+	L2a	LINE/L2	2950	3285	(141)	2199069
13	20.5	0.0	4.7	chr2	201451406	201451448	(40742081)	+	(GCAGCC)n	Simple_repeat	1	43	(0)	2200073
19	4.0	0.0	0.0	chr2	202634995	202635020	(39558509)	+	(GCG)n	Simple_repeat	1	26	(0)	2202411
20	24.8	1.4	4.0	chr2	202635311	202635383	(39558146)	+	(CAG)n	Simple_repeat	1	74	(0)	2202412
28	29.3	0.0	0.0	chr2	202635357	202635439	(39558090)	+	(GCG)n	Simple_repeat	1	83	(0)	2202413
12	20.8	4.3	2.1	chr2	203534996	203535041	(38658488)	+	(GGAGGCG)n	Simple_repeat	1	48	(0)	2204167
444	32.7	16.0	3.0	chr2	205187954	205188316	(37005213)	C	L2c	LINE/L2	(0)	3387	2969	2206591
301	30.9	8.5	4.7	chr2	206764809	206765136	(35428393)	+	L2c	LINE/L2	3062	3422	(4)	2209083
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
30	3.1	0.0	0.0	chr2	207530383	207530415	(34663114)	+	(GGCGGCG)n	Simple_repeat	1	33	(0)	2210182
13	14.6	0.0	8.9	chr2	208255121	208255165	(33938364)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	2211597
216	35.2	9.3	7.2	chr2	212177684	212177934	(30015595)	C	L2b	LINE/L2	(38)	3337	3081	2216608
29	11.6	0.0	0.0	chr2	212177935	212177981	(30015548)	+	(TGTG)n	Simple_repeat	1	47	(0)	2216609
312	36.2	11.2	8.6	chr2	212178001	212178513	(30015016)	C	L2b	LINE/L2	(340)	3079	2552	2216608
19	18.8	2.0	2.0	chr2	214809689	214809738	(27383791)	+	(GGCGG)n	Simple_repeat	1	51	(0)	2220126
24	14.5	2.1	2.0	chr2	216373502	216373542	(25819987)	+	(CT)n	Simple_repeat	1	42	(0)	2222626
34	0.0	0.0	0.0	chr2	216373543	216373571	(25819958)	+	(CA)n	Simple_repeat	1	29	(0)	2222627
720	9.9	10.5	0.0	chr2	216498430	216498540	(25694989)	C	AluSg4	SINE/Alu	(186)	124	1	2222856
2064	24.5	13.8	0.7	chr2	217488297	217489137	(24704392)	+	L1ME3Cz	LINE/L1	40	997	(0)	2224474
2057	25.2	11.7	6.5	chr2	217509332	217511072	(24682457)	C	L1MC4	LINE/L1	(3827)	2388	529	2224506
2526	5.8	0.0	1.0	chr2	218388088	218388396	(23805133)	+	AluSc	SINE/Alu	1	306	(3)	2226012
24	19.4	1.8	0.0	chr2	218961298	218961352	(23232177)	+	(CTCTCT)n	Simple_repeat	1	56	(0)	2227117
1761	15.7	3.8	1.4	chr2	219369321	219369606	(22823923)	+	AluJb	SINE/Alu	2	294	(18)	2227802
34	0.0	0.0	0.0	chr2	219369609	219369637	(22823892)	+	(AC)n	Simple_repeat	1	29	(0)	2227803
445	32.6	0.0	0.0	chr2	219369684	219369812	(22823717)	C	ERV3-16A3_I-int	LTR/ERVL	(3812)	1414	1286	2227804
56	12.4	0.0	0.0	chr2	219571954	219572050	(22621479)	+	(TG)n	Simple_repeat	1	97	(0)	2228145
54	0.0	0.0	0.0	chr2	220081055	220081100	(22112429)	+	(GT)n	Simple_repeat	1	46	(0)	2228980
508	26.7	3.5	5.2	chr2	221411518	221411691	(20781838)	C	MER63A	DNA/hAT-Blackjack	(39)	171	1	2231036
205	28.1	2.4	2.4	chr2	222655712	222655795	(19537734)	+	L2a	LINE/L2	3341	3424	(2)	2232929
18	8.5	0.0	0.0	chr2	231056469	231056493	(11137036)	+	(A)n	Simple_repeat	1	25	(0)	2246156
12	22.0	4.8	0.0	chr2	231056825	231056866	(11136663)	+	G-rich	Low_complexity	1	44	(0)	2246157
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
22	17.3	0.0	2.1	chr2	231708583	231708630	(10484899)	+	(CGC)n	Simple_repeat	1	48	(0)	2247479
334	23.1	3.4	14.4	chr2	231883484	231883723	(10309806)	+	L1MB3	LINE/L1	2922	3134	(3012)	2247826
2446	8.6	0.0	0.0	chr2	232605634	232605935	(9587594)	+	AluSz	SINE/Alu	1	302	(10)	2248937
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
1800	23.6	13.4	8.0	chr2	235136257	235136900	(7056629)	C	Zaphod3	DNA/hAT-Tip100	(3)	1202	542	2253088
754	32.5	10.0	2.6	chr2	235330830	235331394	(6862135)	C	L3	LINE/CR1	(220)	3879	3269	2253411
2175	12.4	0.0	1.3	chr2	235331574	235331872	(6861657)	+	AluSz6	SINE/Alu	1	295	(17)	2253412
2299	11.4	0.0	1.3	chr2	238507337	238507652	(3685877)	C	AluSq	SINE/Alu	(1)	312	1	2257909
24	17.2	1.8	3.5	chr2	238507653	238507671	(3685858)	+	(TC)n	Simple_repeat	1	19	(0)	2257910
18	12.6	0.0	0.0	chr2	238507673	238507699	(3685830)	+	(AC)n	Simple_repeat	1	27	(0)	2257911
1402	27.9	13.0	2.3	chr2	238507702	238508295	(3685234)	C	HAL1	LINE/L1	(285)	2222	1534	2257907
12	20.4	5.6	3.5	chr2	241637639	241637692	(555837)	+	(GCGTC)n	Simple_repeat	1	57	(0)	2261473
55	0.0	0.0	0.0	chr2	241881595	241881641	(311888)	+	(GT)n	Simple_repeat	1	47	(0)	2261811
1966	23.1	0.2	0.1	chr20	60221	63215	(64380952)	+	(ATTCC)n	Simple_repeat	2	3000	(0)	2262201
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
23	33.7	1.0	1.0	chr20	362844	362940	(64081227)	+	(GAAT)n	Simple_repeat	1	98	(0)	2262763
3189	16.7	18.9	0.9	chr20	401715	402163	(64042004)	C	MER44D	DNA/TcMar-Tigger	(163)	542	8	2262862
42	8.0	0.0	0.0	chr20	672389	672442	(63771725)	+	(GT)n	Simple_repeat	1	54	(0)	2263478
780	17.2	15.8	0.0	chr20	856821	857012	(63587155)	C	L2a	LINE/L2	(0)	3426	3199	2263894
3179	12.8	3.0	4.5	chr20	1484020	1484881	(62959286)	+	L1MA4A	LINE/L1	4792	5643	(660)	2265092
3144	13.7	1.2	0.4	chr20	1484889	1485394	(62958773)	+	L1MA4A	LINE/L1	5794	6303	(0)	2265092
2079	14.5	0.3	0.0	chr20	3118191	3118486	(61325681)	+	AluSx1	SINE/Alu	1	297	(15)	2268242
2503	6.7	0.0	0.7	chr20	3118490	3118789	(61325378)	+	AluY	SINE/Alu	2	299	(12)	2268243
1137	13.5	0.0	0.0	chr20	3118792	3118947	(61325220)	+	AluSc8	SINE/Alu	135	290	(21)	2268244
12	26.7	1.8	3.5	chr20	3173075	3173131	(61271036)	+	(CCACAGG)n	Simple_repeat	1	58	(0)	2268350
31	22.5	0.0	0.0	chr20	3784871	3784942	(60659225)	+	(TCA)n	Simple_repeat	1	72	(0)	2269487
203	27.7	2.4	4.6	chr20	3807495	3807581	(60636586)	C	MIR3	SINE/MIR	(59)	149	65	2269529
13	23.8	2.2	2.1	chr20	3820503	3820548	(60623619)	+	(GCGC)n	Simple_repeat	1	47	(0)	2269563
27	18.6	1.8	0.0	chr20	4038092	4038146	(60406021)	+	(TG)n	Simple_repeat	1	56	(0)	2269999
13	24.0	0.0	0.0	chr20	6006258	6006296	(58437871)	+	(GCGCGCG)n	Simple_repeat	1	39	(0)	2273691
13	11.2	14.6	0.0	chr20	18138192	18138239	(46305928)	+	(TGCGGC)n	Simple_repeat	1	55	(0)	2292194
618	26.6	3.9	9.1	chr20	18793954	18794451	(45649716)	+	MLT2F	LTR/ERVL	5	663	(0)	2293236
327	30.5	10.1	5.8	chr20	20051772	20052054	(44392113)	+	L2c	LINE/L2	3047	3350	(25)	2295120
19	22.7	0.0	0.0	chr20	20212278	20212318	(44231849)	+	(CT)n	Simple_repeat	1	41	(0)	2295337
15	26.4	2.1	2.0	chr20	20212318	20212365	(44231802)	+	(CA)n	Simple_repeat	1	49	(0)	2295338
40	4.9	0.0	0.0	chr20	21091042	21091084	(43353083)	+	(TG)n	Simple_repeat	1	43	(0)	2296590
16	9.3	0.0	0.0	chr20	21091170	21091192	(43352975)	+	(CA)n	Simple_repeat	1	23	(0)	2296591
184	29.7	9.9	0.0	chr20	23257947	23258010	(41186157)	+	MIRc	SINE/MIR	7	77	(191)	2299445
13	3.7	0.0	11.4	chr20	23421480	23421514	(41022653)	+	(CGCAGG)n	Simple_repeat	1	35	(0)	2299690
244	26.7	2.9	1.6	chr20	23890702	23891490	(40552677)	+	(CACCAT)n	Simple_repeat	1	812	(0)	2300240
22	24.3	0.0	1.6	chr20	25247981	25248041	(39196126)	+	(CCCGC)n	Simple_repeat	1	61	(0)	2301899
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
114	24.9	4.5	1.9	chr20	26074010	26074407	(38369760)	+	(CATCAC)n	Simple_repeat	1	416	(0)	2303238
2080	8.2	9.2	1.4	chr20	31503372	31503653	(32940514)	+	AluSx	SINE/Alu	7	312	(0)	2306127
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
30	33.3	2.2	1.4	chr20	31845867	31846004	(32598163)	+	GA-rich	Low_complexity	1	141	(0)	2307003
2200	13.2	0.0	1.0	chr20	31955702	31956005	(32488162)	C	AluSx	SINE/Alu	(11)	301	1	2307272
1463	25.1	3.2	5.5	chr20	31956006	31956326	(32487841)	+	L2a	LINE/L2	3119	3426	(0)	2307271
573	28.6	6.0	6.9	chr20	32028582	32028885	(32415282)	C	L2b	LINE/L2	(165)	3210	2910	2307459
220	28.1	10.8	6.4	chr20	32029138	32029321	(32414846)	C	L2a	LINE/L2	(354)	3065	2866	2307445
183	0.0	6.7	0.0	chr20	32277391	32277418	(32166749)	C	MIR1_Amn	SINE/MIR	(85)	145	116	2308086
46	2.2	0.0	0.0	chr20	32277699	32277744	(32166423)	+	(CGC)n	Simple_repeat	1	46	(0)	2308087
2220	10.7	0.3	0.0	chr20	32349012	32349301	(32094866)	C	AluSz	SINE/Alu	(21)	291	1	2308273
1665	20.6	0.3	0.3	chr20	32349407	32349693	(32094474)	C	AluJo	SINE/Alu	(25)	287	1	2308274
17	7.8	0.0	0.0	chr20	32761822	32761848	(31682319)	+	(TCCCC)n	Simple_repeat	1	27	(0)	2309234
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
2133	10.8	0.7	0.3	chr20	34299902	34300206	(30143961)	+	AluSx1	SINE/Alu	1	306	(6)	2312714
1437	25.9	14.9	5.1	chr20	34300207	34300554	(30143613)	+	L2	LINE/L2	2686	3080	(339)	2312709
231	20.4	0.0	0.0	chr20	34300555	34300598	(30143569)	+	MIRb	SINE/MIR	209	252	(16)	2312715
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
487	23.4	5.3	0.8	chr20	35093734	35093858	(29350309)	C	MER94	DNA/hAT-Blackjack	(0)	134	4	2314491
2610	7.1	0.0	0.0	chr20	35096074	35096370	(29347797)	+	AluSx4	SINE/Alu	1	297	(13)	2314498
1074	15.4	3.0	0.6	chr20	35096602	35096763	(29347404)	C	FRAM	SINE/Alu	(10)	166	1	2314499
241	33.3	0.0	0.0	chr20	35269151	35269228	(29174939)	C	MIRb	SINE/MIR	(8)	260	183	2314919
185	28.0	2.0	0.0	chr20	35269256	35269305	(29174862)	C	MIRb	SINE/MIR	(167)	101	51	2314919
16	0.0	4.3	0.0	chr20	35284937	35284959	(29159208)	+	(TTCA)n	Simple_repeat	1	24	(0)	2314939
43	17.6	0.0	1.2	chr20	35285849	35285934	(29158233)	+	(GAT)n	Simple_repeat	1	86	(0)	2314940
15	0.0	0.0	0.0	chr20	35285933	35285949	(29158218)	+	(TG)n	Simple_repeat	1	17	(0)	2314941
189	29.1	7.0	7.5	chr20	35285967	35286197	(29157970)	+	L2a	LINE/L2	2993	3213	(174)	2314942
2361	9.4	0.0	1.0	chr20	35358072	35358380	(29085787)	+	AluSx1	SINE/Alu	1	306	(6)	2315078
61	9.7	0.0	0.0	chr20	35438825	35438912	(29005255)	+	(GT)n	Simple_repeat	1	88	(0)	2315263
2338	6.9	3.3	0.0	chr20	35439237	35439525	(29004642)	C	AluYj4	SINE/Alu	(11)	300	2	2315264
2388	8.8	0.7	0.0	chr20	35615132	35615424	(28828743)	+	AluSp	SINE/Alu	2	296	(17)	2315683
76	0.0	0.0	0.0	chr20	35615425	35615491	(28828676)	+	(AAAG)n	Simple_repeat	1	67	(0)	2315684
995	15.0	0.6	1.2	chr20	35615571	35615730	(28828437)	+	FRAM	SINE/Alu	1	159	(17)	2315685
2451	6.8	1.0	0.0	chr20	35616634	35616929	(28827238)	C	AluSp	SINE/Alu	(14)	299	1	2315686
16	14.4	2.5	2.4	chr20	35742239	35742278	(28701889)	+	(ACACAC)n	Simple_repeat	1	41	(0)	2315915
216	33.7	16.4	1.9	chr20	35771389	35771706	(28672461)	C	L2	LINE/L2	(358)	3061	2689	2316008
412	21.7	8.7	0.4	chr20	35776750	35776880	(28667287)	+	MIR3	SINE/MIR	52	183	(25)	2316017
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
47	0.0	0.0	0.0	chr20	36746080	36746121	(27698046)	+	(GCG)n	Simple_repeat	1	42	(0)	2318340
1387	22.2	10.4	3.0	chr20	36988428	36988757	(27455410)	C	LTR18A	LTR/ERVL	(0)	357	1	2318957
2010	12.8	12.2	2.3	chr20	36988758	36989071	(27455096)	+	MSTA	LTR/ERVL-MaLR	71	428	(0)	2318956
2382	8.1	0.3	0.0	chr20	37950900	37951194	(26492973)	C	AluSp	SINE/Alu	(17)	296	1	2321143
809	26.3	5.9	7.8	chr20	37951195	37951366	(26492801)	C	L1ME4b	LINE/L1	(694)	198	20	2321140
1651	26.8	6.4	1.2	chr20	38191391	38191908	(26252259)	C	L2	LINE/L2	(492)	2927	2381	2321592
242	29.8	10.9	7.6	chr20	38192020	38192204	(26251963)	C	Helitron3Na_Mam	RC/Helitron	(197)	289	98	2321593
2409	12.0	1.8	0.8	chr20	38250537	38250913	(26193254)	C	LTR9B	LTR/ERV1	(86)	558	178	2321735
18	23.8	0.0	2.0	chr20	38926649	38926699	(25517468)	+	(GCG)n	Simple_repeat	1	51	(0)	2323167
15	33.2	1.2	2.4	chr20	40688903	40688984	(23755183)	+	(CGGAG)n	Simple_repeat	1	83	(0)	2326251
20	25.5	3.2	1.5	chr20	41029779	41029841	(23414326)	+	(TC)n	Simple_repeat	1	65	(0)	2326932
304	31.7	8.0	10.3	chr20	41340247	41340489	(23103678)	C	L2b	LINE/L2	(18)	3357	3121	2327403
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
275	33.1	14.2	0.0	chr20	43731667	43731805	(20712362)	C	L3	LINE/CR1	(4)	4095	3934	2331847
630	28.7	4.4	3.2	chr20	43840333	43840727	(20603440)	C	L2b	LINE/L2	(218)	3157	2760	2332097
190	29.2	0.0	7.0	chr20	43840790	43840903	(20603264)	C	L2b	LINE/L2	(794)	2625	2520	2332097
235	18.4	20.9	4.4	chr20	43840932	43841022	(20603145)	+	MIRb	SINE/MIR	114	223	(45)	2332098
118	17.7	1.8	0.0	chr20	44188394	44188621	(20255546)	+	(TG)n	Simple_repeat	1	232	(0)	2332876
444	22.2	11.1	6.7	chr20	44435903	44436012	(20008155)	C	MIRb	SINE/MIR	(14)	254	128	2333491
1821	15.8	0.0	3.1	chr20	44436013	44436329	(20007838)	+	AluSx	SINE/Alu	1	307	(5)	2333492
367	29.1	45.2	0.0	chr20	44678225	44678379	(19765788)	C	L2	LINE/L2	(349)	3070	2846	2334061
612	30.1	4.2	5.1	chr20	44678452	44678784	(19765383)	C	L2c	LINE/L2	(100)	3287	2958	2334062
33	26.3	0.0	0.0	chr20	44885718	44885803	(19558364)	+	(CCG)n	Simple_repeat	1	86	(0)	2334595
192	18.2	0.0	0.0	chr20	44910431	44910463	(19533704)	C	MIRc	SINE/MIR	(122)	146	114	2334634
387	28.6	4.3	0.0	chr20	45881480	45881591	(18562576)	+	MIRc	SINE/MIR	40	156	(112)	2336465
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
1832	14.0	1.4	0.4	chr20	46085049	46085326	(18358841)	C	AluJo	SINE/Alu	(31)	281	1	2336892
223	23.3	0.0	6.2	chr20	46085328	46085391	(18358776)	C	L2c	LINE/L2	(91)	3296	3237	2336891
30	3.1	0.0	0.0	chr20	46111445	46111477	(18332690)	+	(TCCACT)n	Simple_repeat	1	33	(0)	2336950
428	20.4	1.8	8.4	chr20	46111482	46111607	(18332560)	C	MLT1F1	LTR/ERVL-MaLR	(265)	304	181	2336949
176	8.9	8.5	0.0	chr20	46111613	46111941	(18332226)	+	GA-rich	Low_complexity	1	357	(0)	2336951
566	25.0	7.7	9.3	chr20	46111917	46111976	(18332191)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	167	2336949
742	20.6	0.8	0.8	chr20	46111981	46112111	(18332056)	C	AluJr4	SINE/Alu	(181)	131	1	2336952
13	12.1	3.6	0.0	chr20	46255707	46255734	(18188433)	+	(TCCT)n	Simple_repeat	1	29	(0)	2337297
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
16	18.3	2.2	2.2	chr20	47502034	47502078	(16942089)	+	(AGGCGG)n	Simple_repeat	1	46	(0)	2340297
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
610	30.1	0.6	0.0	chr20	49047115	49047297	(15396870)	+	MIR	SINE/MIR	12	195	(67)	2343479
405	22.2	18.9	3.4	chr20	49187515	49187719	(15256448)	C	MIR	SINE/MIR	(14)	248	5	2343769
22	23.3	1.7	0.0	chr20	49188384	49188443	(15255724)	+	(GCCCCC)n	Simple_repeat	1	61	(0)	2343772
28	14.9	5.5	5.2	chr20	49188641	49188731	(15255436)	+	(CCTT)n	Simple_repeat	1	96	(0)	2343773
608	27.1	5.9	0.6	chr20	49188743	49188902	(15255265)	C	L2a	LINE/L2	(1)	3425	3257	2343774
912	24.8	12.0	0.3	chr20	49466702	49467016	(14977151)	+	MLT1K	LTR/ERVL-MaLR	237	593	(2)	2344501
448	21.1	4.0	0.0	chr20	49508634	49508728	(14935439)	C	MER91B	DNA/hAT-Tip100	(0)	190	92	2344602
371	18.5	0.0	3.0	chr20	49508737	49508833	(14935334)	C	MER91B	DNA/hAT-Tip100	(3316)	208	48	2344603
468	29.1	9.7	1.0	chr20	49541895	49542186	(14901981)	C	L2a	LINE/L2	(174)	3252	2933	2344701
65	48.1	0.8	1.2	chr20	49591963	49592317	(14851850)	+	(TCAT)n	Simple_repeat	1	355	(0)	2344825
51	7.7	0.0	0.0	chr20	49592318	49592386	(14851781)	+	(CCAT)n	Simple_repeat	1	69	(0)	2344826
65	48.1	0.8	1.2	chr20	49592387	49592528	(14851639)	+	(TCAT)n	Simple_repeat	4	143	(0)	2344827
14	13.4	6.1	0.0	chr20	49812968	49813000	(14631167)	+	(GGC)n	Simple_repeat	1	35	(0)	2345410
14	26.0	0.0	3.7	chr20	49936321	49936374	(14507793)	+	(GCCCCCC)n	Simple_repeat	1	54	(0)	2345668
14	22.7	1.8	5.2	chr20	50113046	50113102	(14331065)	+	(CCCCGG)n	Simple_repeat	1	58	(0)	2346105
19	13.6	3.9	3.7	chr20	50192507	50192521	(14251646)	+	(TTGTT)n	Simple_repeat	1	49	(0)	2346327
16	21.7	0.0	0.0	chr20	50192522	50192553	(14251614)	+	(T)n	Simple_repeat	1	32	(0)	2346328
645	21.3	7.3	1.2	chr20	50468077	50468242	(13975925)	+	MLT1J	LTR/ERVL-MaLR	2	178	(334)	2347018
27	7.9	2.5	0.0	chr20	50818433	50818472	(13625695)	+	(CT)n	Simple_repeat	1	41	(0)	2347820
2506	9.2	0.0	0.0	chr20	50869743	50870048	(13574119)	C	AluSx1	SINE/Alu	(6)	306	1	2347954
1027	18.3	2.3	4.6	chr20	50870049	50870224	(13573943)	+	MER58A	DNA/hAT-Charlie	45	221	(3)	2347953
15587	12.2	8.0	2.9	chr20	50897241	50898905	(13545262)	C	Tigger3	DNA/TcMar-Tigger	(1038)	1991	236	2347993
3853	16.7	7.6	6.7	chr20	50899520	50900448	(13543719)	+	Tigger3b	DNA/TcMar-Tigger	292	1229	(2)	2348001
1063	17.7	11.4	0.5	chr20	50900450	50900659	(13543508)	C	Tigger3	DNA/TcMar-Tigger	(2793)	236	1	2348002
274	31.9	5.8	2.6	chr20	51307089	51307204	(13136963)	C	MIRb	SINE/MIR	(6)	262	143	2348864
19	0.0	0.0	0.0	chr20	51862008	51862031	(12582136)	+	(CAAA)n	Simple_repeat	1	24	(0)	2350101
14	0.0	4.8	0.0	chr20	52972324	52972344	(11471823)	+	(GGA)n	Simple_repeat	1	22	(0)	2352541
46	19.3	0.7	0.0	chr20	52972406	52972558	(11471609)	+	(TG)n	Simple_repeat	1	154	(0)	2352542
57	13.9	1.0	0.0	chr20	52972696	52972792	(11471375)	+	(GAG)n	Simple_repeat	1	98	(0)	2352543
52	11.5	0.0	0.0	chr20	53748948	53749032	(10695135)	+	(GT)n	Simple_repeat	1	85	(0)	2354252
191	22.9	4.0	0.0	chr20	53749124	53749171	(10694996)	+	MIRb	SINE/MIR	51	100	(168)	2354253
233	25.5	17.9	0.9	chr20	53749277	53749387	(10694780)	+	MIRb	SINE/MIR	134	267	(1)	2354253
195	33.3	7.7	3.6	chr20	54149015	54149126	(10295041)	+	L2a	LINE/L2	3295	3411	(15)	2355160
196	29.4	0.2	0.2	chr20	56761308	56761829	(7682338)	+	(ATGATG)n	Simple_repeat	1	523	(0)	2359799
283	30.9	11.4	8.4	chr20	57038799	57039095	(7405072)	+	L2b	LINE/L2	3063	3369	(6)	2360422
180	8.4	4.0	1.4	chr20	57039096	57039443	(7404724)	+	(ATGG)n	Simple_repeat	1	362	(0)	2360423
30	0.0	0.0	0.0	chr20	62088495	62088520	(2355647)	+	(CA)n	Simple_repeat	1	26	(0)	2368102
4296	15.7	5.7	10.7	chr20	62088525	62088842	(2355325)	+	Tigger3b	DNA/TcMar-Tigger	1	290	(941)	2368103
2229	10.4	0.0	1.3	chr20	62301637	62301943	(2142224)	C	AluSz	SINE/Alu	(6)	306	4	2368406
24	23.9	3.4	6.5	chr20	62387140	62387275	(2056892)	+	G-rich	Low_complexity	1	131	(0)	2368500
20	16.9	3.5	3.4	chr20	62407287	62407343	(2036824)	+	(CGCC)n	Simple_repeat	1	59	(0)	2368521
1775	17.5	5.1	3.0	chr20	62501859	62502223	(1941944)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	2368637
13	19.6	4.0	3.9	chr20	63272867	63272916	(1171251)	+	(GCCCT)n	Simple_repeat	1	52	(0)	2369449
593	29.9	4.2	4.2	chr20	63339156	63339479	(1104688)	+	L1ME1	LINE/L1	5606	5929	(235)	2369497
726	17.7	1.0	0.6	chr20	63491620	63493004	(951163)	+	(GGAT)n	Simple_repeat	1	1399	(0)	2369618
13	16.0	2.7	2.6	chr20	63538166	63538202	(905965)	+	(CCTCCAG)n	Simple_repeat	1	38	(0)	2369685
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
200	26.2	6.2	0.0	chr20	63658031	63658091	(786076)	C	L2c	LINE/L2	(685)	2734	2670	2369855
277	25.5	17.5	1.5	chr20	63981445	63981612	(462555)	+	MIRb	SINE/MIR	19	221	(47)	2370323
15	4.1	0.0	6.9	chr20	64063098	64063126	(381041)	+	(GCGG)n	Simple_repeat	1	29	(0)	2370474
2100	19.9	5.3	2.6	chr21	26798421	26798911	(19911072)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2394523
190	26.0	0.0	0.0	chr21	26799198	26799247	(19910736)	C	L2a	LINE/L2	(1)	3425	3376	2394524
600	28.9	11.1	3.9	chr21	33968192	33968612	(12741371)	C	MLT1J	LTR/ERVL-MaLR	(19)	429	1	2405907
53	0.0	0.0	0.0	chr21	34202389	34202433	(12507550)	+	(GT)n	Simple_repeat	1	45	(0)	2406265
18	4.8	0.0	0.0	chr21	34202434	34202455	(12507528)	+	(AG)n	Simple_repeat	1	22	(0)	2406266
61	0.0	0.0	0.0	chr21	37846354	37846405	(8863578)	+	(TG)n	Simple_repeat	1	52	(0)	2412203
45	4.8	1.4	2.9	chr21	37987411	37987429	(8722554)	+	(ATCT)n	Simple_repeat	1	18	(0)	2412403
53	8.7	0.0	0.0	chr21	37987430	37987504	(8722479)	+	(TATG)n	Simple_repeat	1	75	(0)	2412404
460	26.1	4.7	2.1	chr21	38054497	38054641	(8655342)	C	LTR79	LTR/ERVL	(0)	527	379	2412505
5660	14.4	3.4	5.2	chr21	38869752	38870269	(7839714)	C	L1MA9	LINE/L1	(0)	6312	5796	2413635
29	10.1	0.0	0.0	chr21	38870270	38870312	(7839671)	+	(TG)n	Simple_repeat	1	43	(0)	2413636
5660	15.4	3.1	7.1	chr21	38870313	38871268	(7838715)	C	L1MA9	LINE/L1	(517)	5795	4870	2413635
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
264	4.2	7.7	2.6	chr21	42615256	42615868	(4094115)	+	(AC)n	Simple_repeat	1	660	(0)	2419095
30	0.0	3.5	0.0	chr21	43359647	43359675	(3350308)	+	(AC)n	Simple_repeat	1	30	(0)	2420198
282	9.3	0.0	0.0	chr21	43359814	43359856	(3350127)	C	MER57A1	LTR/ERV1	(66)	366	324	2420199
13	19.5	0.0	2.7	chr21	43719258	43719294	(2990689)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2420697
2275	9.9	0.3	0.0	chr21	43857319	43857612	(2852371)	+	AluSx	SINE/Alu	5	299	(13)	2420935
2123	13.4	0.7	1.6	chr21	43857616	43857928	(2852055)	+	AluSq2	SINE/Alu	2	311	(2)	2420936
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
12	18.9	11.7	0.0	chr21	45287617	45287676	(1422307)	+	(CCCCTGG)n	Simple_repeat	1	67	(0)	2422705
13	7.7	0.0	9.1	chr21	45287900	45287932	(1422051)	+	(GCCCC)n	Simple_repeat	1	33	(0)	2422706
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
2470	8.6	0.3	5.2	chr22	17673350	17673676	(33144792)	C	AluY	SINE/Alu	(0)	311	1	2429519
2602	18.0	2.0	1.0	chr22	17926914	17927418	(32891050)	C	L1MB4	LINE/L1	(0)	6180	5671	2429897
2091	8.8	6.9	0.0	chr22	18149659	18149942	(32668526)	+	AluSx	SINE/Alu	1	305	(7)	2430308
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
501	22.5	6.3	8.8	chr22	19292177	19292501	(31525967)	+	Tigger3	DNA/TcMar-Tigger	5	322	(26)	2431744
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
58	31.0	1.1	1.1	chr22	19717763	19717945	(31100523)	+	(CA)n	Simple_repeat	1	185	(0)	2432479
16	16.2	2.3	2.3	chr22	19941706	19941753	(30876715)	+	(GCGCCGC)n	Simple_repeat	1	48	(0)	2432712
12	20.7	0.0	2.9	chr22	19941852	19941886	(30876582)	+	(GCCGG)n	Simple_repeat	1	35	(0)	2432713
14	25.2	0.0	5.3	chr22	20116722	20116778	(30701690)	+	(CCCTC)n	Simple_repeat	1	57	(0)	2432923
14	18.7	2.2	4.3	chr22	20117136	20117181	(30701287)	+	(CCGC)n	Simple_repeat	1	47	(0)	2432924
13	18.4	1.2	4.9	chr22	20117489	20117554	(30700914)	+	G-rich	Low_complexity	1	63	(0)	2432925
25	30.1	2.3	3.7	chr22	20212590	20212720	(30605748)	+	(TGTGCA)n	Simple_repeat	1	134	(0)	2433016
307	25.2	0.3	0.3	chr22	20251479	20252202	(30566266)	+	(ATCATC)n	Simple_repeat	1	726	(0)	2433047
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
2289	9.8	1.3	0.0	chr22	20856432	20856728	(29961740)	C	AluSq2	SINE/Alu	(8)	305	5	2434073
413	34.3	7.5	2.3	chr22	20857126	20857301	(29961167)	C	MIRb	SINE/MIR	(81)	187	2	2434074
2353	8.8	1.0	0.0	chr22	20920221	20920517	(29897951)	+	AluSx3	SINE/Alu	1	300	(11)	2434230
506	5.7	0.0	0.0	chr22	20946645	20946714	(29871754)	+	U3	snRNA	1	70	(147)	2434296
1540	17.9	4.3	1.8	chr22	20954446	20954719	(29863749)	+	AluSg	SINE/Alu	1	281	(29)	2434310
1392	7.7	0.0	0.6	chr22	21002626	21002808	(29815660)	C	AluYh3	SINE/Alu	(0)	311	130	2434376
293	35.0	11.2	5.9	chr22	21666391	21666528	(29151940)	+	L2	LINE/L2	1672	1813	(1606)	2435647
12	9.8	0.0	0.0	chr22	21867625	21867646	(28950822)	+	(TGCC)n	Simple_repeat	1	22	(0)	2436080
19	24.2	1.7	1.6	chr22	21867648	21867707	(28950761)	+	G-rich	Low_complexity	1	61	(0)	2436081
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
12	15.1	2.3	6.8	chr22	21938425	21938467	(28880001)	+	(GAGCGA)n	Simple_repeat	1	44	(0)	2436248
28	14.3	1.5	4.4	chr22	21938582	21938648	(28879820)	+	A-rich	Low_complexity	1	68	(0)	2436249
299	29.2	6.6	0.0	chr22	21938763	21938875	(28879593)	C	MER5C	DNA/hAT-Charlie	(49)	264	144	2436250
14	8.8	0.0	0.0	chr22	23219069	23219092	(27599376)	+	(ATGG)n	Simple_repeat	1	24	(0)	2437967
30409	18.9	4.2	4.4	chr22	23538730	23546008	(27272460)	+	HERVK-int	LTR/ERVK	1	7267	(269)	2438464
890	26.2	4.1	1.3	chr22	23549952	23552988	(27265480)	+	(CATC)n	Simple_repeat	1	3162	(0)	2438469
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
589	29.8	1.8	4.9	chr22	24011633	24011858	(26806610)	C	MIRb	SINE/MIR	(7)	261	43	2439360
2078	20.6	13.8	1.4	chr22	24465688	24466169	(26352299)	+	MLT1F2	LTR/ERVL-MaLR	1	551	(9)	2440076
451	29.1	9.0	8.1	chr22	24583017	24583136	(26235332)	+	MIR	SINE/MIR	103	230	(32)	2440297
253	28.1	15.0	1.7	chr22	24583281	24583453	(26235015)	C	MIRc	SINE/MIR	(43)	225	30	2440299
246	22.4	3.9	0.0	chr22	24727227	24727275	(26091193)	+	MLT1E2	LTR/ERVL-MaLR	93	143	(510)	2440540
910	28.2	13.2	1.5	chr22	24727318	24727481	(26090987)	+	MLT1E2	LTR/ERVL-MaLR	159	352	(275)	2440540
28	0.0	0.0	3.2	chr22	24727482	24727512	(26090956)	+	(CAA)n	Simple_repeat	1	31	(0)	2440541
910	28.2	13.2	1.5	chr22	24727513	24727753	(26090715)	+	MLT1E2	LTR/ERVL-MaLR	353	618	(9)	2440540
235	17.4	3.7	7.7	chr22	24953904	24953977	(25864491)	+	MIRc	SINE/MIR	85	158	(50)	2441076
20	20.2	0.0	2.3	chr22	25111218	25111260	(25707208)	+	(AC)n	Simple_repeat	1	43	(0)	2441503
13	14.7	3.3	0.0	chr22	25111408	25111437	(25707031)	+	(GCC)n	Simple_repeat	1	31	(0)	2441504
522	29.8	5.9	7.0	chr22	25943281	25943706	(24874762)	+	L2a	LINE/L2	2655	3102	(324)	2443211
85	31.0	1.4	0.7	chr22	25969964	25970245	(24848223)	+	(CAT)n	Simple_repeat	1	286	(0)	2443275
140	23.1	5.2	0.2	chr22	26642409	26642814	(24175654)	+	GA-rich	Low_complexity	1	427	(0)	2444837
154	28.0	0.2	0.5	chr22	26967236	26967634	(23850834)	+	(TGA)n	Simple_repeat	1	400	(0)	2445596
271	24.6	8.3	10.9	chr22	27417042	27417251	(23401217)	+	L2b	LINE/L2	2961	3164	(223)	2446644
11	25.6	0.0	4.3	chr22	27802093	27802138	(23016330)	+	G-rich	Low_complexity	1	46	(0)	2447537
21	24.4	5.1	1.2	chr22	27919212	27919290	(22899178)	+	(GCC)n	Simple_repeat	1	83	(0)	2447727
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
358	28.0	9.3	7.0	chr22	28978612	28978853	(21839615)	C	HAL1	LINE/L1	(4)	2503	2256	2449670
534	27.2	11.9	6.6	chr22	28978919	28979370	(21839098)	C	HAL1	LINE/L1	(410)	2097	1619	2449670
14	30.8	0.0	0.0	chr22	29268282	29268333	(21550135)	+	G-rich	Low_complexity	1	52	(0)	2450246
13	14.0	0.0	5.7	chr22	29306273	29306307	(21512161)	+	(GCCCA)n	Simple_repeat	1	35	(0)	2450301
232	12.4	0.6	0.0	chr22	29306448	29306497	(21511971)	+	MIRc	SINE/MIR	90	144	(124)	2450302
11	25.3	0.0	5.8	chr22	29580899	29580950	(21237518)	+	(CAGCCC)n	Simple_repeat	1	52	(0)	2450909
2235	11.9	0.0	0.0	chr22	29590244	29590553	(21227915)	+	AluSg	SINE/Alu	1	310	(0)	2450935
749	28.8	3.3	3.7	chr22	29821384	29821625	(20996843)	+	MIRb	SINE/MIR	27	267	(1)	2451406
1366	20.8	0.4	1.5	chr22	29821724	29821997	(20996471)	+	AluJr	SINE/Alu	11	281	(31)	2451407
13	0.0	0.0	0.0	chr22	29883217	29883233	(20935235)	+	(GGC)n	Simple_repeat	1	17	(0)	2451571
2518	7.8	0.0	0.3	chr22	29979211	29979519	(20838949)	+	AluY	SINE/Alu	1	308	(3)	2451757
914	18.6	0.0	5.2	chr22	30312376	30312547	(20505921)	+	AluJr	SINE/Alu	137	299	(13)	2452337
24	14.3	0.0	2.1	chr22	30312553	30312600	(20505868)	+	(AAC)n	Simple_repeat	1	48	(0)	2452338
967	33.8	4.6	1.5	chr22	30312815	30313211	(20505257)	C	L2c	LINE/L2	(2)	3385	2976	2452339
334	9.6	1.9	0.0	chr22	31064061	31064112	(19754356)	C	MLT1O	LTR/ERVL-MaLR	(372)	170	118	2453929
313	33.6	0.8	8.1	chr22	31064228	31064363	(19754105)	C	L2c	LINE/L2	(150)	3237	3112	2453930
1513	24.7	8.3	2.8	chr22	31158883	31159699	(19658769)	C	L1MC4	LINE/L1	(279)	7763	6787	2454140
2395	8.1	1.0	0.0	chr22	31159700	31160008	(19658460)	C	AluSz	SINE/Alu	(0)	312	1	2454141
1189	22.6	4.0	1.8	chr22	31160009	31160038	(19658430)	C	L1MC4	LINE/L1	(1198)	6844	6816	2454140
64	39.0	1.8	0.8	chr22	31629312	31629691	(19188777)	+	(GT)n	Simple_repeat	1	387	(0)	2455232
320	23.8	16.9	1.4	chr22	31750361	31750505	(19067963)	+	L2a	LINE/L2	2668	2839	(580)	2455530
16	12.1	5.6	0.0	chr22	31944032	31944067	(18874401)	+	G-rich	Low_complexity	1	38	(0)	2456006
14	5.0	0.0	0.0	chr22	31944332	31944352	(18874116)	+	(GGC)n	Simple_repeat	1	21	(0)	2456007
890	21.7	7.4	0.0	chr22	32076921	32077109	(18741359)	+	MER58A	DNA/hAT-Charlie	21	224	(0)	2456335
30	35.1	4.4	2.4	chr22	32077183	32077207	(18741261)	+	(TCCC)n	Simple_repeat	1	26	(0)	2456336
27	7.7	0.0	2.3	chr22	32077208	32077251	(18741217)	+	(TTCC)n	Simple_repeat	1	44	(0)	2456337
30	35.1	4.4	2.4	chr22	32077252	32077429	(18741039)	+	(TCCC)n	Simple_repeat	3	184	(0)	2456338
42	0.0	0.0	0.0	chr22	32464647	32464682	(18353786)	+	(AC)n	Simple_repeat	1	36	(0)	2457029
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
2036	11.8	6.6	2.7	chr22	35230881	35231246	(15587222)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2462530
23	25.2	1.4	1.4	chr22	35371884	35371955	(15446513)	+	(CCCGC)n	Simple_repeat	1	73	(0)	2462817
12	18.7	4.3	4.2	chr22	35372274	35372319	(15446149)	+	(CTC)n	Simple_repeat	1	48	(0)	2462818
1460	20.1	5.8	1.7	chr22	35399548	35399846	(15418622)	+	AluJb	SINE/Alu	1	312	(0)	2462903
11	14.8	4.9	4.7	chr22	35836276	35836316	(14982152)	+	A-rich	Low_complexity	1	43	(0)	2463822
12	18.3	0.0	3.0	chr22	35840509	35840541	(14977927)	+	(CCCCTC)n	Simple_repeat	1	33	(0)	2463826
38	5.0	0.0	0.0	chr22	35840616	35840657	(14977811)	+	(GT)n	Simple_repeat	1	42	(0)	2463827
2074	28.5	21.1	3.6	chr22	35902956	35904342	(14914126)	+	L2c	LINE/L2	1487	3285	(102)	2463943
2215	8.7	1.7	0.0	chr22	36409531	36409818	(14408650)	C	AluSz6	SINE/Alu	(19)	293	1	2464955
445	31.1	6.2	3.2	chr22	36481120	36481308	(14337160)	C	MIRb	SINE/MIR	(29)	239	45	2465155
13	15.9	0.0	0.0	chr22	36481469	36481496	(14336972)	+	(CCGC)n	Simple_repeat	1	28	(0)	2465156
2292	13.6	9.1	0.8	chr22	36828472	36828863	(13989605)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2465942
355	31.5	11.8	3.2	chr22	36828974	36829219	(13989249)	+	L2c	LINE/L2	3047	3316	(71)	2465943
908	29.1	6.8	4.4	chr22	36976999	36977547	(13840921)	+	LTR78B	LTR/ERV1	194	756	(540)	2466229
554	16.0	14.5	0.0	chr22	36977670	36977769	(13840699)	+	MER41B	LTR/ERV1	1	117	(517)	2466230
877	15.2	12.3	0.0	chr22	36977770	36977940	(13840528)	+	AluJr	SINE/Alu	117	311	(1)	2466231
14	15.8	0.0	5.1	chr22	37020037	37020075	(13798393)	+	G-rich	Low_complexity	1	39	(0)	2466324
39	5.8	1.9	0.0	chr22	37317079	37317132	(13501336)	+	(GGCTGGACAG)n	Simple_repeat	1	55	(0)	2466968
21	22.5	4.5	0.0	chr22	37519123	37519189	(13299279)	+	(CGCCTC)n	Simple_repeat	1	70	(0)	2467416
236	22.5	10.1	4.0	chr22	37659512	37659585	(13158883)	C	MIRc	SINE/MIR	(71)	197	119	2467753
327	23.9	14.8	0.9	chr22	37661632	37661741	(13156727)	+	L2a	LINE/L2	3297	3424	(2)	2467758
1266	13.2	0.0	1.6	chr22	37661893	37662115	(13156353)	C	AluSx1	SINE/Alu	(0)	312	127	2467759
27	8.9	1.9	3.8	chr22	37746284	37746335	(13072133)	+	(CGG)n	Simple_repeat	1	53	(0)	2467969
192	27.4	14.3	1.2	chr22	37802211	37802295	(13016173)	C	MIR	SINE/MIR	(56)	206	109	2468116
30	3.1	0.0	0.0	chr22	37805259	37805291	(13013177)	+	(GAGGCA)n	Simple_repeat	1	33	(0)	2468119
2280	3.7	5.5	0.0	chr22	37844596	37844867	(12973601)	C	AluSc	SINE/Alu	(21)	288	1	2468202
2235	6.2	0.4	2.4	chr22	37848993	37849280	(12969188)	C	AluSp	SINE/Alu	(20)	293	12	2468218
232	26.5	14.6	0.8	chr22	37933800	37933917	(12884551)	C	MIR3	SINE/MIR	(65)	143	7	2468446
786	13.9	0.0	1.7	chr22	38033076	38033190	(12785278)	+	AluJb	SINE/Alu	200	312	(0)	2468662
782	28.2	1.9	10.3	chr22	38179799	38179957	(12638511)	C	L2a	LINE/L2	(983)	2436	2285	2468965
50	0.0	0.0	0.0	chr22	38180141	38180183	(12638285)	+	(AC)n	Simple_repeat	1	43	(0)	2468969
15	23.5	1.9	1.9	chr22	38273101	38273152	(12545316)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	2469148
2211	10.6	0.0	0.0	chr22	38507085	38507376	(12311092)	+	AluSx1	SINE/Alu	1	292	(20)	2469637
328	26.5	9.3	7.0	chr22	38655784	38655941	(12162527)	+	MIRc	SINE/MIR	5	166	(102)	2470027
216	31.3	8.2	7.4	chr22	38655927	38656047	(12162421)	+	MIRb	SINE/MIR	26	147	(121)	2470028
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
394	26.3	10.8	14.5	chr22	38873299	38873612	(11944856)	C	L1ME3G	LINE/L1	(130)	794	561	2470439
303	30.6	14.9	4.1	chr22	38938001	38938809	(11879659)	C	L2	LINE/L2	(611)	2808	1897	2470571
2117	11.7	2.7	0.3	chr22	39002922	39003212	(11815256)	+	AluSz	SINE/Alu	1	298	(14)	2470687
599	20.8	7.8	5.3	chr22	39003213	39003254	(11815214)	+	L1MB3	LINE/L1	4572	4615	(1531)	2470686
1429	22.2	5.6	6.7	chr22	39003410	39003857	(11814611)	+	MLT2F	LTR/ERVL	221	663	(0)	2470688
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
301	29.1	12.0	1.2	chr22	39349156	39349318	(11469150)	C	L2b	LINE/L2	(20)	3367	3194	2471453
278	29.7	7.1	7.8	chr22	39349500	39349627	(11468841)	C	L2c	LINE/L2	(1)	3386	3260	2471454
1475	11.6	0.0	0.0	chr22	39449221	39449419	(11369049)	C	AluSx1	SINE/Alu	(10)	302	104	2471672
887	29.7	13.1	0.9	chr22	39490030	39490480	(11327988)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	6	2471752
2459	9.3	0.0	0.6	chr22	39500684	39500996	(11317472)	C	AluSz	SINE/Alu	(1)	311	1	2471781
452	31.1	15.5	1.6	chr22	39500997	39501307	(11317161)	+	L2	LINE/L2	2720	3081	(338)	2471782
13	14.7	3.3	0.0	chr22	39520440	39520469	(11297999)	+	G-rich	Low_complexity	1	31	(0)	2471815
979	15.8	18.1	0.3	chr22	39533082	39533367	(11285101)	+	Charlie1	DNA/hAT-Charlie	2393	2740	(41)	2471834
779	33.2	10.4	1.5	chr22	39562700	39563173	(11255295)	+	L3	LINE/CR1	3394	3914	(185)	2471904
433	26.7	1.9	1.3	chr22	39563195	39564490	(11253978)	+	(GT)n	Simple_repeat	1	1320	(0)	2471905
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
12	12.6	0.0	3.6	chr22	40370878	40370905	(10447563)	+	G-rich	Low_complexity	1	28	(0)	2473431
13	23.6	0.0	0.0	chr22	40636655	40636689	(10181779)	+	(CGC)n	Simple_repeat	1	35	(0)	2473972
2304	11.1	0.3	0.0	chr22	40711166	40711463	(10107005)	C	AluSq2	SINE/Alu	(14)	299	1	2474169
1735	13.8	0.0	12.7	chr22	40711464	40711683	(10106785)	+	AluJr4	SINE/Alu	123	303	(9)	2474168
257	27.6	18.1	1.6	chr22	40711687	40711870	(10106598)	+	LTR81A	LTR/Gypsy	933	1153	(0)	2474166
13	10.5	6.5	0.0	chr22	41021799	41021829	(9796639)	+	G-rich	Low_complexity	1	33	(0)	2474932
185	23.5	3.8	5.6	chr22	41021974	41022027	(9796441)	+	MamRTE1	LINE/RTE-BovB	778	830	(2982)	2474933
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
17	9.4	2.6	5.1	chr22	41092447	41092484	(9725984)	+	(GCG)n	Simple_repeat	1	39	(0)	2475139
14	25.3	1.8	3.6	chr22	41092589	41092643	(9725825)	+	GA-rich	Low_complexity	1	56	(0)	2475140
12	21.7	0.0	0.0	chr22	41092658	41092689	(9725779)	+	(GGCCG)n	Simple_repeat	1	32	(0)	2475141
427	23.7	16.6	6.4	chr22	41448756	41448895	(9369573)	+	MIRb	SINE/MIR	56	212	(56)	2475932
2195	7.7	5.2	0.7	chr22	41590323	41590619	(9227849)	+	AluSp	SINE/Alu	2	312	(1)	2476271
15	17.7	2.1	4.1	chr22	41620709	41620756	(9197712)	+	(CCTGCCC)n	Simple_repeat	1	49	(0)	2476343
14	22.6	3.8	1.8	chr22	41621544	41621596	(9196872)	+	(CGCCTG)n	Simple_repeat	1	55	(0)	2476344
2382	7.1	0.0	1.0	chr22	41666293	41666589	(9151879)	+	AluSx1	SINE/Alu	2	295	(17)	2476465
1559	18.1	1.3	5.0	chr22	41666590	41666777	(9151691)	+	MER2	DNA/TcMar-Tigger	119	304	(41)	2476461
2203	8.9	1.3	3.0	chr22	41689080	41689383	(9129085)	+	AluSx1	SINE/Alu	1	299	(13)	2476517
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
12	15.3	3.5	0.0	chr22	41833358	41833386	(8985082)	+	(GGTG)n	Simple_repeat	1	30	(0)	2476878
204	30.6	1.8	4.4	chr22	41845930	41846042	(8972426)	C	L2c	LINE/L2	(243)	3144	3035	2476908
389	28.3	7.0	0.0	chr22	41846163	41846282	(8972186)	C	MLT1N2	LTR/ERVL-MaLR	(2)	560	432	2476909
309	37.2	9.1	2.4	chr22	41975391	41975811	(8842657)	+	L2c	LINE/L2	2248	2699	(720)	2477183
383	35.2	11.7	1.9	chr22	41975947	41976360	(8842108)	+	L2c	LINE/L2	2927	3386	(1)	2477183
29	17.0	2.3	5.6	chr22	42369250	42369337	(8449131)	+	G-rich	Low_complexity	1	90	(0)	2477899
1242	17.9	0.0	0.5	chr22	42671178	42671390	(8147078)	+	L1PA15	LINE/L1	5952	6163	(2)	2478641
943	15.2	0.0	0.0	chr22	42671396	42671540	(8146928)	C	LTR8B	LTR/ERV1	(675)	145	1	2478636
303	32.0	1.9	0.0	chr22	42671543	42671645	(8146823)	C	MLT1G1	LTR/ERVL-MaLR	(284)	265	161	2478627
1321	14.0	9.7	12.1	chr22	42671694	42671785	(8146683)	C	LTR47A	LTR/ERVL	(0)	452	377	2478642
2498	7.8	0.0	0.3	chr22	42671786	42672094	(8146374)	+	AluY	SINE/Alu	3	310	(1)	2478643
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
2147	12.5	1.0	0.7	chr22	43066707	43067009	(7751459)	+	AluSx1	SINE/Alu	1	304	(8)	2479501
1960	10.1	0.7	11.0	chr22	43067689	43067803	(7750665)	+	AluSx	SINE/Alu	1	112	(200)	2479503
2156	11.0	0.3	3.9	chr22	43067804	43068113	(7750355)	C	AluSg4	SINE/Alu	(11)	299	1	2479504
184	34.0	4.1	2.1	chr22	43143535	43143630	(7674838)	+	L2a	LINE/L2	3327	3424	(2)	2479694
388	36.7	7.8	3.2	chr22	43275455	43275857	(7542611)	C	L2b	LINE/L2	(35)	3340	2918	2479920
223	30.1	1.7	2.6	chr22	43335634	43335749	(7482719)	C	MIRc	SINE/MIR	(4)	264	150	2480027
265	26.2	1.1	0.3	chr22	43475442	43476103	(7342365)	+	(GAT)n	Simple_repeat	1	669	(0)	2480313
360	30.1	3.9	0.0	chr22	43476114	43476236	(7342232)	C	MIRb	SINE/MIR	(15)	253	126	2480314
317	34.5	0.7	1.6	chr22	43504027	43505231	(7313237)	+	(ATG)n	Simple_repeat	1	1213	(0)	2480358
318	32.8	1.7	0.0	chr22	43862809	43862924	(6955544)	C	L2a	LINE/L2	(2)	3424	3307	2480892
822	14.7	27.8	2.3	chr22	43862984	43863201	(6955267)	+	AluSg7	SINE/Alu	2	296	(13)	2480893
334	31.5	0.7	0.7	chr22	44021529	44021675	(6796793)	C	MER21B	LTR/ERVL	(783)	155	9	2481208
331	20.8	4.9	0.0	chr22	44021673	44021749	(6796719)	+	MLT1C	LTR/ERVL-MaLR	85	165	(225)	2481204
68	0.0	0.0	0.0	chr22	44021760	44021817	(6796651)	+	(CA)n	Simple_repeat	1	58	(0)	2481212
671	23.8	1.8	1.2	chr22	44021825	44021990	(6796478)	+	MLT1C	LTR/ERVL-MaLR	218	384	(83)	2481204
286	23.1	1.7	0.5	chr22	44213396	44214056	(6604412)	+	(TCA)n	Simple_repeat	1	672	(0)	2481550
43	26.5	4.8	1.7	chr22	44332061	44332385	(6486083)	+	(CT)n	Simple_repeat	1	335	(0)	2481781
185	28.4	15.9	0.8	chr22	44884922	44885038	(5933430)	C	MIRb	SINE/MIR	(66)	202	65	2482848
262	30.3	10.4	4.3	chr22	45268945	45269106	(5549362)	C	ORSL	DNA/hAT-Tip100	(22)	253	81	2483577
358	22.8	4.8	0.5	chr22	45290430	45290642	(5527826)	+	(TG)n	Simple_repeat	1	225	(0)	2483632
3705	10.9	1.5	1.1	chr22	45290643	45291169	(5527299)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2483633
17	21.1	4.1	0.0	chr22	45671885	45671933	(5146535)	+	(CGG)n	Simple_repeat	1	51	(0)	2484357
33	19.3	0.0	3.7	chr22	45671955	45672036	(5146432)	+	(CCT)n	Simple_repeat	1	82	(0)	2484358
465	10.9	8.3	1.7	chr22	45979405	45980445	(4838023)	+	(CA)n	Simple_repeat	1	1127	(0)	2484826
175	9.5	7.2	0.8	chr22	45980821	45981153	(4837315)	+	(TG)n	Simple_repeat	1	357	(0)	2484827
2500	7.5	0.0	0.0	chr22	45981263	45981567	(4836901)	+	AluY	SINE/Alu	2	306	(5)	2484828
397	27.3	0.3	0.7	chr22	45993237	45994265	(4824203)	+	(TGGTGG)n	Simple_repeat	1	1032	(0)	2484850
21	4.0	0.0	0.0	chr22	46033399	46033424	(4785044)	+	(GT)n	Simple_repeat	1	26	(0)	2484918
18	12.4	0.0	2.7	chr22	46267947	46267983	(4550485)	+	(CCGCC)n	Simple_repeat	1	37	(0)	2485277
13	17.5	1.9	7.5	chr22	46268158	46268209	(4550259)	+	(GGCGCG)n	Simple_repeat	1	53	(0)	2485278
325	34.8	4.8	0.6	chr22	46297583	46297761	(4520707)	+	L2a	LINE/L2	3236	3422	(4)	2485328
1590	20.6	9.5	3.2	chr22	46335153	46335459	(4483009)	C	MER4B	LTR/ERV1	(263)	347	2	2485393
14	7.1	2.9	5.7	chr22	46762864	46762897	(4055571)	+	G-rich	Low_complexity	1	35	(0)	2486028
226	31.1	2.9	4.7	chr22	47009035	47009232	(3809236)	+	MIRb	SINE/MIR	21	262	(0)	2486336
240	20.4	1.9	0.6	chr22	47009234	47009754	(3808714)	+	(TCA)n	Simple_repeat	1	531	(0)	2486337
258	26.4	1.4	0.0	chr22	47655845	47655916	(3162552)	+	MIRb	SINE/MIR	188	260	(8)	2487184
411	25.2	2.1	0.8	chr22	49452371	49452924	(1365544)	+	(ATGG)n	Simple_repeat	1	564	(0)	2489388
29	8.6	3.0	2.9	chr22	49452925	49452990	(1365478)	+	(TGGA)n	Simple_repeat	1	68	(0)	2489389
208	30.5	1.1	0.6	chr22	49505084	49505715	(1312753)	+	(ATG)n	Simple_repeat	1	639	(0)	2489452
285	16.4	6.1	2.0	chr22	49580304	49581041	(1237427)	+	(AC)n	Simple_repeat	1	783	(0)	2489544
300	20.1	2.3	0.3	chr22	49595450	49596093	(1222375)	+	(TGATGG)n	Simple_repeat	1	659	(0)	2489557
13	12.3	0.0	9.3	chr22	49918445	49918487	(899981)	+	G-rich	Low_complexity	1	43	(0)	2489962
60	23.0	6.4	4.9	chr22	50507704	50508031	(310437)	+	(CCCGC)n	Simple_repeat	1	349	(0)	2490778
17	17.7	0.0	0.0	chr22	50526098	50526135	(292333)	+	(CAGCGC)n	Simple_repeat	1	38	(0)	2490809
14	24.1	8.1	2.1	chr22	50526145	50526230	(292238)	+	G-rich	Low_complexity	1	93	(0)	2490810
12	18.9	7.1	0.0	chr22	50581574	50581615	(236853)	+	(GGCTGG)n	Simple_repeat	1	45	(0)	2490900
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
13	0.0	4.3	4.2	chr3	4467162	4467184	(193828375)	+	(CAG)n	Simple_repeat	1	24	(0)	2499047
274	32.0	6.5	5.2	chr3	4474767	4475132	(193820427)	C	MLT1M	LTR/ERVL-MaLR	(162)	510	140	2499067
580	21.2	7.7	2.2	chr3	4475146	4475280	(193820279)	C	MER5A	DNA/hAT-Charlie	(10)	179	37	2499068
380	25.4	5.1	0.8	chr3	4976236	4976366	(193319193)	+	MER91C	DNA/hAT-Tip100	1	137	(3)	2499889
392	26.2	7.6	4.3	chr3	4976371	4976538	(193319021)	+	MIRb	SINE/MIR	16	191	(17)	2499890
28	0.0	5.9	0.0	chr3	5196914	5196947	(193098612)	+	(TCTTT)n	Simple_repeat	1	36	(0)	2500388
826	10.3	2.5	0.0	chr3	5196948	5197063	(193098496)	C	AluSx3	SINE/Alu	(28)	283	165	2500389
18	19.9	0.0	0.0	chr3	5197065	5197099	(193098460)	+	(T)n	Simple_repeat	1	35	(0)	2500390
241	23.8	10.1	2.4	chr3	5197122	5197203	(193098356)	+	L2b	LINE/L2	3287	3375	(0)	2500391
550	29.4	0.0	5.3	chr3	5197247	5197436	(193098123)	C	MER103C	DNA/hAT-Charlie	(45)	252	73	2500392
209	36.7	2.4	0.0	chr3	9363318	9363437	(188932122)	+	MIR3	SINE/MIR	34	156	(52)	2507069
1353	21.8	3.9	10.4	chr3	9622769	9623260	(188672299)	+	MLT1C	LTR/ERVL-MaLR	9	467	(0)	2507606
399	26.9	5.1	2.3	chr3	9623272	9623404	(188672155)	+	LTR83	LTR/ERVL	489	625	(155)	2507600
1435	17.0	10.7	3.2	chr3	9623415	9623691	(188671868)	+	AluJr4	SINE/Alu	1	300	(12)	2507607
2191	11.2	0.3	0.0	chr3	9648896	9649190	(188646369)	C	AluSz	SINE/Alu	(15)	297	2	2507671
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
23	19.7	1.9	1.8	chr3	9769207	9769260	(188526299)	+	(AC)n	Simple_repeat	1	55	(0)	2507908
2420	6.9	0.7	0.3	chr3	9986936	9987241	(188308318)	+	AluY	SINE/Alu	3	309	(2)	2508419
18	3.3	6.5	0.0	chr3	10191879	10191909	(188103650)	+	(AATG)n	Simple_repeat	1	33	(0)	2508885
54	0.0	3.8	0.0	chr3	10192024	10192076	(188103483)	+	(GT)n	Simple_repeat	1	55	(0)	2508886
188	15.9	5.4	1.3	chr3	13199857	13200284	(185095275)	+	(CA)n	Simple_repeat	1	451	(0)	2514813
320	17.6	12.8	0.0	chr3	14145053	14145120	(184150439)	+	FLAM_A	SINE/Alu	52	129	(13)	2516366
55	0.0	0.0	0.0	chr3	14403078	14403124	(183892435)	+	(GT)n	Simple_repeat	1	47	(0)	2516884
23	31.8	1.0	3.0	chr3	14403274	14403371	(183892188)	+	(TG)n	Simple_repeat	1	99	(0)	2516885
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
1383	17.6	2.0	12.2	chr3	15359757	15360085	(182935474)	+	AluJo	SINE/Alu	1	295	(17)	2518663
240	13.2	0.0	0.0	chr3	15360090	15360127	(182935432)	+	MER33	DNA/hAT-Charlie	287	324	(0)	2518664
356	9.1	0.0	0.0	chr3	15360208	15360251	(182935308)	C	Alu	SINE/Alu	(89)	44	1	2518665
2211	11.4	0.7	0.0	chr3	15360253	15360549	(182935010)	C	AluSz	SINE/Alu	(13)	299	1	2518666
3132	7.9	0.8	12.8	chr3	16101342	16101889	(182193670)	C	LTR10F	LTR/ERV1	(29)	482	1	2519934
471	28.6	9.8	5.2	chr3	16796609	16796841	(181498718)	C	MLT1L	LTR/ERVL-MaLR	(8)	504	261	2521025
48	0.0	0.0	0.0	chr3	16796842	16796882	(181498677)	+	(CA)n	Simple_repeat	1	41	(0)	2521026
471	30.3	10.1	5.3	chr3	16796883	16797089	(181498470)	C	MLT1L	LTR/ERVL-MaLR	(285)	325	125	2521025
639	28.9	3.2	2.8	chr3	17478661	17478874	(180816685)	+	MLT1H	LTR/ERVL-MaLR	128	342	(207)	2521920
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
613	27.9	5.5	2.4	chr3	18085160	18085368	(180210191)	C	MamRep1879	DNA/hAT-Tip100?	(0)	216	1	2522842
17143	4.0	0.7	0.1	chr3	18328057	18331287	(179964272)	C	L1PA3	LINE/L1	(2771)	3375	126	2523180
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
742	23.7	9.1	4.5	chr3	23095427	23095846	(175199713)	C	Charlie4a	DNA/hAT-Charlie	(64)	444	4	2529641
203	30.3	10.3	9.6	chr3	23761484	23761618	(174533941)	C	MIR3	SINE/MIR	(60)	148	13	2530712
351	32.1	2.1	3.5	chr3	23761808	23761952	(174533607)	+	MER91A	DNA/hAT-Tip100	1	143	(53)	2530713
1747	23.9	5.7	3.2	chr3	23915024	23915498	(174380061)	+	MLT1D	LTR/ERVL-MaLR	18	505	(0)	2531000
730	25.2	19.1	1.6	chr3	23915502	23916073	(174379486)	+	L2a	LINE/L2	2731	3426	(0)	2531001
31	15.1	3.4	0.0	chr3	24238253	24238311	(174057248)	+	(GT)n	Simple_repeat	1	61	(0)	2531552
13	5.3	0.0	0.0	chr3	24495218	24495237	(173800322)	+	(GCG)n	Simple_repeat	1	20	(0)	2531966
16	15.2	6.5	2.0	chr3	24495301	24495346	(173800213)	+	(CCG)n	Simple_repeat	1	49	(0)	2531967
196	32.5	0.0	6.1	chr3	24683602	24683683	(173611876)	C	MIR3	SINE/MIR	(78)	130	54	2532246
14	0.0	0.0	0.0	chr3	25664850	25664867	(172630692)	+	(GCC)n	Simple_repeat	1	18	(0)	2533626
180	34.1	15.2	2.8	chr3	27368371	27368835	(170926724)	C	L2b	LINE/L2	(640)	2779	2247	2535955
14	15.3	0.0	0.0	chr3	27369307	27369335	(170926224)	+	(GTCCC)n	Simple_repeat	1	29	(0)	2535958
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
14	18.9	4.5	2.2	chr3	31533127	31533170	(166762389)	+	(GGC)n	Simple_repeat	1	46	(0)	2542254
41	9.3	0.0	0.0	chr3	31980806	31980863	(166314696)	+	(CA)n	Simple_repeat	1	58	(0)	2542974
13	17.6	5.0	0.0	chr3	31980864	31980894	(166314665)	+	(CGCG)n	Simple_repeat	1	33	(0)	2542975
570	24.5	6.5	0.6	chr3	32178167	32178326	(166117233)	+	MLT1H	LTR/ERVL-MaLR	23	192	(357)	2543367
14	17.5	0.0	0.0	chr3	32570815	32570846	(165724713)	+	(GGCGGC)n	Simple_repeat	1	32	(0)	2544140
13	14.8	0.0	3.1	chr3	32570874	32570905	(165724654)	+	G-rich	Low_complexity	1	32	(0)	2544141
55	0.0	0.0	0.0	chr3	33645930	33645976	(164649583)	+	(AC)n	Simple_repeat	1	47	(0)	2546217
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
405	27.2	6.9	9.9	chr3	34010327	34010391	(164285168)	+	MLT1H1	LTR/ERVL-MaLR	1	52	(497)	2546813
2712	5.4	0.7	0.0	chr3	34010392	34010686	(164284873)	C	AluY	SINE/Alu	(14)	297	1	2546814
14	18.3	5.8	5.5	chr3	37176559	37176627	(161118932)	+	(GGAGGCC)n	Simple_repeat	1	73	(0)	2551103
184	7.2	0.0	3.5	chr3	38165413	38165441	(160130118)	+	L2b	LINE/L2	2962	2989	(386)	2552611
1136	30.9	3.3	3.0	chr3	39180055	39180693	(159114866)	C	L2a	LINE/L2	(139)	3287	2639	2554101
22	21.4	0.0	4.6	chr3	40309721	40309785	(157985774)	+	(CCT)n	Simple_repeat	1	65	(0)	2555737
17	4.2	0.0	0.0	chr3	40457227	40457251	(157838308)	+	(CGCA)n	Simple_repeat	1	25	(0)	2556019
21	9.7	4.1	3.9	chr3	43286102	43286153	(155009406)	+	(TATGTA)n	Simple_repeat	1	52	(0)	2560421
13	4.5	0.0	7.4	chr3	43286331	43286357	(155009202)	+	(TCC)n	Simple_repeat	1	27	(0)	2560422
16	12.7	0.0	5.3	chr3	43286463	43286500	(155009059)	+	(CGCCC)n	Simple_repeat	1	38	(0)	2560423
13	25.5	0.0	0.0	chr3	43690981	43691017	(154604542)	+	(GCG)n	Simple_repeat	1	37	(0)	2560995
14	19.1	0.0	2.6	chr3	45388444	45388481	(152907078)	+	(GCCCC)n	Simple_repeat	1	38	(0)	2563751
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
18	16.2	1.9	5.5	chr3	47476084	47476137	(150819422)	+	(GGCCG)n	Simple_repeat	1	55	(0)	2567227
1462	12.8	2.2	1.3	chr3	47476182	47476407	(150819152)	+	AluJo	SINE/Alu	2	229	(83)	2567228
49	10.7	0.0	0.0	chr3	48087706	48087778	(150207781)	+	(CA)n	Simple_repeat	1	73	(0)	2568627
2253	9.5	0.0	0.7	chr3	48300766	48301061	(149994498)	+	AluSc	SINE/Alu	1	294	(15)	2569125
61	0.0	0.0	0.0	chr3	48559899	48559950	(149735609)	+	(CA)n	Simple_repeat	1	52	(0)	2569564
750	20.3	0.7	0.7	chr3	48559951	48560088	(149735471)	C	AluJr	SINE/Alu	(38)	274	137	2569565
13	19.8	0.0	6.5	chr3	48990529	48990574	(149304985)	+	(CGAGCC)n	Simple_repeat	1	46	(0)	2570444
26	21.6	1.6	0.0	chr3	49093912	49093975	(149201584)	+	(CCG)n	Simple_repeat	1	65	(0)	2570661
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
2065	10.5	0.0	2.3	chr3	49429415	49429719	(148865840)	C	AluSx1	SINE/Alu	(10)	302	5	2571324
16	26.7	0.0	3.5	chr3	49470325	49470381	(148825178)	+	(GGC)n	Simple_repeat	1	57	(0)	2571453
290	30.6	3.6	1.8	chr3	49856122	49856231	(148439328)	+	L2b	LINE/L2	3082	3193	(182)	2572118
13	0.0	0.0	0.0	chr3	50238164	50238180	(148057379)	+	(GCT)n	Simple_repeat	1	17	(0)	2572808
12	23.9	0.0	2.4	chr3	50292275	50292315	(148003244)	+	G-rich	Low_complexity	1	41	(0)	2572875
183	25.5	3.8	0.0	chr3	50569634	50569684	(147725875)	C	MIR1_Amn	SINE/MIR	(64)	166	114	2573214
83	0.0	0.0	0.0	chr3	52045856	52045926	(146249633)	+	(TG)n	Simple_repeat	1	71	(0)	2575375
15	23.3	3.5	6.7	chr3	52278686	52278771	(146016788)	+	G-rich	Low_complexity	1	89	(0)	2575687
22	27.4	2.8	4.5	chr3	52455478	52455631	(145839928)	+	(GGC)n	Simple_repeat	1	151	(0)	2575910
196	26.9	2.9	1.5	chr3	52536035	52536102	(145759457)	+	MIRb	SINE/MIR	198	266	(2)	2576001
338	31.2	8.6	1.8	chr3	53255289	53255451	(145040108)	+	MIR	SINE/MIR	13	187	(75)	2577296
19	8.9	3.5	8.5	chr3	53882033	53882089	(144413470)	+	(CTTCTC)n	Simple_repeat	1	59	(0)	2578192
12	13.0	0.0	9.8	chr3	53882243	53882283	(144413276)	+	G-rich	Low_complexity	1	41	(0)	2578193
25	37.2	0.8	1.5	chr3	56801486	56801615	(141493944)	+	GA-rich	Low_complexity	1	131	(0)	2582755
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
250	17.4	0.0	0.0	chr3	58334915	58334928	(139960631)	C	AluSq	SINE/Alu	(182)	131	118	2585828
63	1.8	0.0	0.0	chr3	58334929	58334986	(139960573)	+	(GT)n	Simple_repeat	1	58	(0)	2585829
250	17.4	0.0	0.0	chr3	58334987	58335018	(139960541)	C	AluSq	SINE/Alu	(196)	117	86	2585828
48	0.0	0.0	0.0	chr3	58335019	58335059	(139960500)	+	(GT)n	Simple_repeat	1	41	(0)	2585830
696	18.3	0.9	0.0	chr3	58335060	58335174	(139960385)	C	AluJo	SINE/Alu	(196)	116	1	2585831
67	0.0	0.0	0.0	chr3	61249934	61249990	(137045569)	+	(AC)n	Simple_repeat	1	57	(0)	2590232
2657	15.9	2.0	0.9	chr3	61574639	61575075	(136720484)	C	MSTB2	LTR/ERVL-MaLR	(1)	456	15	2590844
312	11.9	0.0	0.0	chr3	61632532	61632573	(136662986)	C	5S	rRNA	(79)	42	1	2590959
198	27.8	18.7	0.0	chr3	61632588	61632713	(136662846)	C	MIRc	SINE/MIR	(36)	232	78	2590960
737	32.1	10.9	2.8	chr3	61632890	61633329	(136662230)	+	L2a	LINE/L2	2937	3425	(1)	2590961
629	22.8	13.0	2.2	chr3	61894916	61895099	(136400460)	C	MER20	DNA/hAT-Charlie	(11)	208	2	2591419
17	0.0	0.0	0.0	chr3	64163932	64163950	(134131609)	+	(A)n	Simple_repeat	1	19	(0)	2595235
1661	11.9	12.8	2.2	chr3	64164091	64164368	(134131191)	+	AluSx	SINE/Alu	1	312	(0)	2595236
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
12	19.6	0.0	0.0	chr3	67654708	67654736	(130640823)	+	(GGCCG)n	Simple_repeat	1	29	(0)	2601161
14	0.0	0.0	0.0	chr3	69084996	69085013	(129210546)	+	(GCC)n	Simple_repeat	1	18	(0)	2603423
534	24.0	11.9	3.9	chr3	71816310	71816517	(126479042)	+	MIRb	SINE/MIR	41	267	(1)	2607872
304	17.8	1.4	11.0	chr3	71816525	71816584	(126478975)	C	Ricksha_c	DNA/MULE-MuDR	(1143)	905	852	2607873
54	0.0	0.0	0.0	chr3	71816585	71816630	(126478929)	+	(GT)n	Simple_repeat	1	46	(0)	2607874
304	17.8	1.4	11.0	chr3	71816631	71816651	(126478908)	C	Ricksha_c	DNA/MULE-MuDR	(1197)	851	832	2607873
2032	18.9	3.1	1.5	chr3	71816743	71817155	(126478404)	C	MLT2D	LTR/ERVL	(40)	515	1	2607875
2178	16.5	0.9	0.0	chr3	72990571	72990915	(125304644)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	2610377
305	14.4	1.9	1.9	chr3	72990920	72990987	(125304572)	C	MLT2C1	LTR/ERVL	(0)	567	503	2610378
21	15.7	3.8	3.6	chr3	72990989	72991041	(125304518)	+	GA-rich	Low_complexity	1	55	(0)	2610379
411	22.6	3.8	3.8	chr3	73321585	73321690	(124973869)	+	MIR	SINE/MIR	2	107	(155)	2611032
1249	28.0	10.0	4.4	chr3	94162694	94163257	(104132302)	+	MLT1L	LTR/ERVL-MaLR	7	605	(5)	2633946
2493	5.8	0.3	0.0	chr3	101686977	101687270	(96608289)	C	AluSp	SINE/Alu	(18)	295	1	2643440
22	3.7	0.0	3.3	chr3	112641702	112641731	(85653828)	+	(GT)n	Simple_repeat	1	30	(0)	2658117
23	27.1	0.0	0.0	chr3	119463509	119463574	(78831985)	+	(GCCAGA)n	Simple_repeat	1	66	(0)	2667614
225	29.5	12.3	2.1	chr3	119463821	119464016	(78831543)	C	MIRc	SINE/MIR	(23)	245	19	2667615
199	26.4	9.0	8.1	chr3	119468658	119468756	(78826803)	+	MIRc	SINE/MIR	34	133	(135)	2667627
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
26	0.0	0.0	0.0	chr3	122681195	122681219	(75614340)	+	(GGGGCG)n	Simple_repeat	1	25	(0)	2672447
18	9.3	2.8	2.7	chr3	122681359	122681394	(75614165)	+	(TGT)n	Simple_repeat	1	37	(0)	2672448
2387	11.9	0.0	0.0	chr3	122824721	122825032	(75470527)	C	AluSz6	SINE/Alu	(0)	312	1	2672671
62	20.0	3.9	5.4	chr3	122825033	122825087	(75470472)	+	(CTTT)n	Simple_repeat	2	58	(0)	2672672
16	36.2	0.0	1.3	chr3	123584947	123585025	(74710534)	+	(GCC)n	Simple_repeat	1	79	(0)	2673960
2824	19.7	11.8	3.0	chr3	123936381	123936499	(74359060)	C	L1ME1	LINE/L1	(0)	6179	6049	2674529
2265	8.7	1.2	2.6	chr3	123936500	123936843	(74358716)	+	L1PA14	LINE/L1	5806	6144	(17)	2674530
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
312	32.9	2.5	2.5	chr3	126209119	126209280	(72086279)	C	MIRb	SINE/MIR	(70)	198	37	2678254
89	19.5	2.2	2.6	chr3	127547665	127547888	(70747671)	+	(CCCCT)n	Simple_repeat	1	229	(0)	2680227
410	27.9	11.9	2.1	chr3	127849114	127849347	(70446212)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	252	2680791
519	29.3	9.6	6.5	chr3	127849413	127849675	(70445884)	C	MLT1J	LTR/ERVL-MaLR	(237)	275	4	2680791
2506	8.1	13.9	22.3	chr3	128152657	128153231	(70142328)	C	LTR12F	LTR/ERV1	(0)	519	1	2681287
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
53	22.2	3.3	1.9	chr3	128556700	128556850	(69738709)	+	(GT)n	Simple_repeat	1	156	(0)	2681917
304	29.9	16.9	1.1	chr3	128618271	128618449	(69677110)	C	MIR	SINE/MIR	(29)	233	21	2682054
19	25.0	0.0	0.0	chr3	129160917	129160965	(69134594)	+	(CGCC)n	Simple_repeat	1	49	(0)	2683173
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
115	37.2	0.0	0.5	chr3	130236424	130236850	(68058709)	+	(CAC)n	Simple_repeat	1	427	(0)	2685214
522	24.3	2.6	3.3	chr3	130821103	130821255	(67474304)	+	MLT1E1A	LTR/ERVL-MaLR	1	152	(408)	2686037
13	3.1	15.2	0.0	chr3	130821307	130821339	(67474220)	+	(TATGATT)n	Simple_repeat	1	38	(0)	2686038
1516	24.3	3.0	3.5	chr3	130821366	130821762	(67473797)	+	MLT1E1A	LTR/ERVL-MaLR	286	680	(0)	2686037
535	30.1	5.5	4.6	chr3	132231507	132231722	(66063837)	+	MIR	SINE/MIR	45	262	(0)	2688133
649	1.4	0.0	0.0	chr3	132231798	132231869	(66063690)	C	tRNA-Cys-TGY	tRNA	(3)	72	1	2688134
18	4.7	0.0	0.0	chr3	132231894	132231915	(66063644)	+	(TC)n	Simple_repeat	1	22	(0)	2688135
14	19.7	4.2	2.0	chr3	132417559	132417606	(65877953)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	2688441
11	27.7	0.0	0.0	chr3	132660552	132660590	(65634969)	+	(GGAGCG)n	Simple_repeat	1	39	(0)	2688747
2411	9.3	0.6	0.6	chr3	133437243	133437555	(64858004)	+	AluSp	SINE/Alu	1	313	(0)	2689886
39	23.9	3.3	2.4	chr3	133437571	133437691	(64857868)	+	GA-rich	Low_complexity	1	125	(0)	2689887
38	2.8	0.0	0.0	chr3	134374902	134374938	(63920621)	+	(TG)n	Simple_repeat	1	37	(0)	2691351
181	32.8	0.0	3.0	chr3	134375136	134375201	(63920358)	+	L3b	LINE/CR1	4138	4201	(1031)	2691352
19	17.5	0.0	0.0	chr3	138175002	138175034	(60120525)	+	(T)n	Simple_repeat	1	33	(0)	2697100
501	24.9	0.0	5.2	chr3	138175036	138175247	(60120312)	C	L1MEg	LINE/L1	(4473)	1611	1411	2697101
2310	9.2	0.3	0.0	chr3	140957468	140957750	(57337809)	+	AluSx	SINE/Alu	9	292	(20)	2701563
228	19.1	2.3	0.0	chr3	141240182	141240223	(57055336)	C	MLT1L	LTR/ERVL-MaLR	(362)	248	206	2701987
726	28.1	14.0	1.4	chr3	141240274	141240644	(57054915)	C	MLT1J1	LTR/ERVL-MaLR	(12)	436	1	2701988
36	16.3	3.1	4.0	chr3	149970880	149970975	(48324584)	+	(GCG)n	Simple_repeat	1	99	(0)	2714495
30	24.7	1.2	0.0	chr3	150408250	150408330	(47887229)	+	(CGG)n	Simple_repeat	1	82	(0)	2715186
1973	24.5	8.1	4.1	chr3	159829657	159830380	(38465179)	+	Charlie15b	DNA/hAT-Charlie	279	1033	(28)	2728813
37	0.0	0.0	0.0	chr3	168096250	168096281	(30199278)	+	(GT)n	Simple_repeat	1	32	(0)	2739595
34	3.0	0.0	0.0	chr3	168220706	168220739	(30074820)	+	(AC)n	Simple_repeat	1	34	(0)	2739761
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
19	20.3	0.0	0.0	chr3	173396011	173396046	(24899513)	+	(GT)n	Simple_repeat	1	36	(0)	2747507
18	0.0	0.0	0.0	chr3	173396061	173396083	(24899476)	+	(GGC)n	Simple_repeat	1	23	(0)	2747508
25	9.2	0.0	0.0	chr3	183298720	183298754	(14996805)	+	(CT)n	Simple_repeat	1	35	(0)	2762420
34	0.0	0.0	0.0	chr3	183298766	183298794	(14996765)	+	(CA)n	Simple_repeat	1	29	(0)	2762421
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
306	31.6	18.8	3.4	chr3	184694796	184695358	(13600201)	+	L2	LINE/L2	2412	3081	(338)	2765149
18	16.7	7.9	5.2	chr3	185498746	185498834	(12796725)	+	(GATCCCG)n	Simple_repeat	1	96	(0)	2766483
2549	25.8	7.8	6.2	chr3	185837228	185838591	(12456968)	C	L1MC4	LINE/L1	(1898)	5984	4616	2767174
2224	7.4	3.9	2.4	chr3	185838601	185838769	(12456790)	+	L1PA13	LINE/L1	5805	5974	(189)	2767183
2099	12.1	1.9	1.0	chr3	185838770	185839074	(12456485)	+	AluSz6	SINE/Alu	1	308	(4)	2767184
207	38.6	0.9	0.9	chr3	186354983	186355097	(11940462)	+	L3	LINE/CR1	2547	2661	(1438)	2768202
242	25.9	1.1	1.4	chr3	186355107	186355693	(11939866)	+	(CCA)n	Simple_repeat	1	588	(0)	2768203
284	27.0	2.6	0.0	chr3	186537341	186537414	(11758145)	C	MIR3	SINE/MIR	(8)	200	125	2768526
12	31.3	0.0	0.0	chr3	190322358	190322404	(7973155)	+	G-rich	Low_complexity	1	47	(0)	2774921
19	8.2	7.7	0.0	chr3	192571315	192571353	(5724206)	+	A-rich	Low_complexity	1	42	(0)	2778112
18	4.5	0.0	0.0	chr3	192917586	192917608	(5377951)	+	(CA)n	Simple_repeat	1	23	(0)	2778679
16	16.1	0.0	0.0	chr3	192917880	192917907	(5377652)	+	(C)n	Simple_repeat	1	28	(0)	2778680
394	22.0	3.0	4.7	chr3	193241639	193241786	(5053773)	C	MIR3	SINE/MIR	(50)	158	19	2779171
340	26.6	2.1	1.2	chr3	194351937	194352970	(3942589)	+	(GT)n	Simple_repeat	1	1056	(0)	2780988
23	8.0	5.0	0.0	chr3	194583890	194583929	(3711630)	+	(CGG)n	Simple_repeat	1	42	(0)	2781440
1205	30.9	8.5	2.4	chr3	195425615	195426313	(2869246)	+	L2b	LINE/L2	2399	3146	(229)	2782908
422	24.6	3.2	1.6	chr3	196042691	196042814	(2252745)	C	L1MB7	LINE/L1	(6225)	421	296	2784064
949	21.6	8.6	1.5	chr3	196042866	196043362	(2252197)	C	L1ME3A	LINE/L1	(2298)	3848	3583	2784079
14	0.0	0.0	0.0	chr3	196432404	196432421	(1863138)	+	(CCG)n	Simple_repeat	1	18	(0)	2784995
13	12.5	0.0	0.0	chr3	196739832	196739857	(1555702)	+	(GCCCC)n	Simple_repeat	1	26	(0)	2785665
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
13	20.0	5.0	0.0	chr3	197297909	197297948	(997611)	+	(GCGGA)n	Simple_repeat	1	42	(0)	2786665
651	23.5	4.8	2.2	chr3	197960679	197960861	(334698)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	2787895
634	25.3	21.2	0.6	chr4	782342	782655	(189431900)	+	L2a	LINE/L2	3017	3412	(14)	2789517
14	21.8	5.3	5.0	chr4	932006	932081	(189282474)	+	(CCGCAG)n	Simple_repeat	1	80	(0)	2789688
634	29.6	2.1	0.4	chr4	1452299	1454217	(188760338)	+	(CAT)n	Simple_repeat	1	1959	(0)	2790215
497	30.5	0.6	0.6	chr4	1514072	1515491	(188699064)	+	(GATGAT)n	Simple_repeat	1	1428	(0)	2790273
1228	26.1	3.9	2.6	chr4	1515498	1515882	(188698673)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	180	2790274
13	12.7	0.0	0.0	chr4	2934848	2934873	(187279682)	+	(GCCAC)n	Simple_repeat	1	26	(0)	2792456
18	20.3	3.9	0.0	chr4	3074605	3074655	(187139900)	+	(GCCGCC)n	Simple_repeat	1	53	(0)	2792718
67	1.6	0.0	0.0	chr4	3074877	3074940	(187139615)	+	(CAG)n	Simple_repeat	1	64	(0)	2792719
54	20.4	0.0	0.0	chr4	3074941	3075052	(187139503)	+	(CGC)n	Simple_repeat	1	112	(0)	2792720
198	29.2	3.0	6.8	chr4	7103108	7103210	(183111345)	C	MIR3	SINE/MIR	(52)	156	58	2799601
264	26.9	2.8	6.3	chr4	7103178	7103288	(183111267)	+	L2b	LINE/L2	3255	3361	(14)	2799602
23	15.1	0.0	8.6	chr4	7103441	7103510	(183111045)	+	(GCCCC)n	Simple_repeat	1	70	(0)	2799603
75	55.0	2.0	1.3	chr4	7362700	7364159	(182850396)	+	(ATCATT)n	Simple_repeat	1	1489	(0)	2800053
277	27.6	2.7	3.2	chr4	7639435	7640542	(182574013)	+	(TGTGAG)n	Simple_repeat	1	1138	(0)	2800463
481	27.4	3.9	2.2	chr4	7640550	7640728	(182573827)	C	MLT1D	LTR/ERVL-MaLR	(308)	197	16	2800462
11	24.4	2.2	2.2	chr4	20046462	20046506	(170168049)	+	A-rich	Low_complexity	1	46	(0)	2820394
58	1.9	0.0	0.0	chr4	24470272	24470325	(165744230)	+	(AC)n	Simple_repeat	1	54	(0)	2827178
31	3.1	0.0	0.0	chr4	24472664	24472696	(165741859)	+	(GCC)n	Simple_repeat	1	33	(0)	2827180
24	15.1	4.9	1.6	chr4	24472751	24472762	(165741793)	+	(GCGTGT)n	Simple_repeat	1	61	(0)	2827181
27	14.7	2.1	0.0	chr4	24472763	24472809	(165741746)	+	(TG)n	Simple_repeat	1	48	(0)	2827182
29	19.6	0.0	0.0	chr4	24472884	24472921	(165741634)	+	(GC)n	Simple_repeat	1	38	(0)	2827183
31	0.0	3.3	0.0	chr4	24472922	24472951	(165741604)	+	(GT)n	Simple_repeat	1	31	(0)	2827184
29	19.6	0.0	0.0	chr4	24472952	24472971	(165741584)	+	(GC)n	Simple_repeat	1	20	(0)	2827185
13	28.4	0.0	2.0	chr4	24584229	24584277	(165630278)	+	(CCCGG)n	Simple_repeat	1	49	(0)	2827350
22	27.2	1.4	2.8	chr4	24584565	24584635	(165629920)	+	(GC)n	Simple_repeat	1	72	(0)	2827351
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
585	24.2	22.5	11.7	chr4	40924343	40924848	(149289707)	+	MLT1G1	LTR/ERVL-MaLR	3	579	(0)	2853122
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
12	17.1	2.9	2.8	chr4	53377870	53377904	(136836651)	+	(CGGAG)n	Simple_repeat	1	36	(0)	2867612
14	9.6	0.0	0.0	chr4	54064473	54064495	(136150060)	+	(CCG)n	Simple_repeat	1	23	(0)	2868661
49	0.0	0.0	0.0	chr4	56050274	56050315	(134164240)	+	(GT)n	Simple_repeat	1	42	(0)	2871927
12	9.2	0.0	4.0	chr4	56050318	56050342	(134164213)	+	(TGG)n	Simple_repeat	1	25	(0)	2871928
49	0.0	0.0	0.0	chr4	56437257	56437298	(133777257)	+	(GT)n	Simple_repeat	1	42	(0)	2872604
2538	5.2	0.7	0.3	chr4	56977902	56978210	(133236345)	+	AluY	SINE/Alu	1	310	(1)	2873751
18	21.1	1.7	4.9	chr4	68349770	68349829	(121864726)	+	(CCG)n	Simple_repeat	1	61	(0)	2888211
33	23.1	1.9	3.6	chr4	70688885	70688992	(119525563)	+	GA-rich	Low_complexity	1	110	(0)	2890981
21	8.6	2.6	2.5	chr4	70689132	70689170	(119525385)	+	(AGG)n	Simple_repeat	1	40	(0)	2890982
847	14.4	0.8	0.0	chr4	70840351	70840475	(119374080)	+	AluSx	SINE/Alu	8	133	(179)	2891291
2327	9.6	0.0	0.3	chr4	70840480	70840782	(119373773)	+	AluSx1	SINE/Alu	1	302	(10)	2891292
272	22.2	8.0	0.0	chr4	71190272	71190352	(119024203)	C	MamSINE1	SINE/tRNA-RTE	(2)	288	201	2891897
54	2.0	0.0	0.0	chr4	71190386	71190436	(119024119)	+	(AC)n	Simple_repeat	1	51	(0)	2891898
396	18.9	3.6	2.1	chr4	71190565	71190677	(119023878)	+	FRAM	SINE/Alu	2	106	(60)	2891899
54	0.0	0.0	0.0	chr4	74099785	74099830	(116114725)	+	(GT)n	Simple_repeat	1	46	(0)	2895706
22398	8.9	0.8	0.5	chr4	74505331	74511474	(115703081)	+	L1PA6	LINE/L1	5	6146	(8)	2896281
38	0.0	0.0	0.0	chr4	76198842	76198874	(114015681)	+	(GT)n	Simple_repeat	1	33	(0)	2898881
25	22.1	6.3	4.4	chr4	76949773	76949899	(113264656)	+	(AGCCGG)n	Simple_repeat	1	135	(0)	2900137
613	16.3	7.5	0.0	chr4	77861747	77861869	(112352686)	+	L1MB7	LINE/L1	6042	6174	(10)	2901320
47	0.0	2.3	0.0	chr4	77861982	77862025	(112352530)	+	(GT)n	Simple_repeat	1	45	(0)	2901321
34	7.5	0.0	0.0	chr4	78058104	78058146	(112156409)	+	(GT)n	Simple_repeat	1	43	(0)	2901639
31	10.5	3.9	0.0	chr4	80201850	80201901	(110012654)	+	(TG)n	Simple_repeat	1	54	(0)	2904523
14	30.7	0.0	0.0	chr4	80202042	80202089	(110012466)	+	(GGC)n	Simple_repeat	1	48	(0)	2904524
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
1353	25.7	4.3	3.5	chr4	83170697	83171141	(107043414)	C	MER50C	LTR/ERV1	(23)	711	237	2909002
419	25.4	20.3	5.5	chr4	83171144	83171397	(107043158)	C	MER50C	LTR/ERV1	(433)	301	1	2909002
23932	10.1	2.4	0.9	chr4	83506441	83509926	(106704629)	C	HERVH48-int	LTR/ERV1	(2532)	4122	586	2909669
21	20.2	2.0	0.0	chr4	84498039	84498089	(105716466)	+	GA-rich	Low_complexity	1	52	(0)	2911181
18	26.4	0.0	7.9	chr4	84966648	84966680	(105247875)	+	(TCC)n	Simple_repeat	1	43	(46)	2911910
13	9.3	0.0	0.0	chr4	84966681	84966703	(105247852)	+	(CTGA)n	Simple_repeat	1	23	(0)	2911911
18	26.4	0.0	7.9	chr4	84966704	84966736	(105247819)	+	(TCC)n	Simple_repeat	44	89	(0)	2911910
19	13.0	2.2	4.3	chr4	84966775	84966782	(105247773)	+	(CCTT)n	Simple_repeat	1	46	(0)	2911912
13	12.6	5.4	2.6	chr4	84966783	84966819	(105247736)	+	(CCTTT)n	Simple_repeat	1	39	(0)	2911913
66	0.0	0.0	0.0	chr4	85827462	85827517	(104387038)	+	(GT)n	Simple_repeat	1	56	(0)	2913040
2669	4.7	0.0	1.4	chr4	88456469	88456764	(101757791)	C	AluY	SINE/Alu	(19)	292	1	2917210
432	21.6	1.9	1.0	chr4	94978660	94978762	(95235793)	C	MLT1G	LTR/ERVL-MaLR	(452)	127	24	2925833
1939	10.5	3.3	15.0	chr4	94978763	94978938	(95235617)	C	THE1B	LTR/ERVL-MaLR	(0)	364	198	2925835
37	5.1	0.0	0.0	chr4	94978939	94978979	(95235576)	+	(CA)n	Simple_repeat	1	41	(0)	2925836
1939	10.5	3.3	15.0	chr4	94978980	94979216	(95235339)	C	THE1B	LTR/ERVL-MaLR	(167)	197	1	2925835
13	27.6	5.6	1.3	chr4	98995966	98996036	(91218519)	+	(CTC)n	Simple_repeat	1	75	(0)	2931109
39	6.7	0.0	0.0	chr4	110851273	110851319	(79363236)	+	(TG)n	Simple_repeat	1	47	(0)	2947161
14	13.9	3.1	0.0	chr4	112514924	112514955	(77699600)	+	(CGCCCC)n	Simple_repeat	1	33	(0)	2949283
3421	18.1	0.9	1.1	chr4	115128017	115128660	(75085895)	C	L1PB4	LINE/L1	(55)	6101	5459	2952882
1930	2.2	15.2	9.6	chr4	123508561	123508832	(66705723)	C	AluYc	SINE/Alu	(8)	291	2	2964108
34	5.6	0.0	0.0	chr4	125315055	125315092	(64899463)	+	(TG)n	Simple_repeat	1	38	(0)	2966465
18	23.8	2.6	5.1	chr4	128287653	128287728	(61926827)	+	(CGC)n	Simple_repeat	1	78	(0)	2970493
12	22.8	1.5	7.6	chr4	128287796	128287809	(61926746)	+	(CCCGCC)n	Simple_repeat	1	24	(42)	2970494
12	8.4	0.0	6.9	chr4	128287810	128287838	(61926717)	+	(CCTCC)n	Simple_repeat	1	29	(0)	2970495
12	22.8	1.5	7.6	chr4	128287839	128287860	(61926695)	+	(CCCGCC)n	Simple_repeat	25	66	(0)	2970494
195	19.1	2.3	0.0	chr4	128349946	128349987	(61864568)	C	L2a	LINE/L2	(9)	3417	3375	2970621
3472	19.4	9.4	2.4	chr4	128350168	128351135	(61863420)	+	LTR28C	LTR/ERV1	1	968	(6)	2970622
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
1224	23.1	5.0	1.6	chr4	139171929	139172240	(51042315)	+	L1ME1	LINE/L1	5449	5771	(413)	2984076
2409	17.9	8.2	0.0	chr4	139172249	139172707	(51041848)	+	Tigger7	DNA/TcMar-Tigger	1	500	(1991)	2984083
18	7.5	0.0	0.0	chr4	139556235	139556262	(50658293)	+	(GGA)n	Simple_repeat	1	28	(0)	2984844
13	16.4	0.0	5.3	chr4	139556334	139556371	(50658184)	+	(CCCTCGC)n	Simple_repeat	1	38	(0)	2984845
27	8.8	0.0	0.0	chr4	139666098	139666134	(50548421)	+	(GT)n	Simple_repeat	1	37	(0)	2985077
267	33.3	11.0	2.0	chr4	140116688	140116886	(50097669)	C	AmnSINE1	SINE/5S-Deu-L2	(168)	407	189	2985752
14	24.4	3.6	1.8	chr4	140150977	140151031	(50063524)	+	G-rich	Low_complexity	1	57	(0)	2985796
32	19.4	2.5	1.2	chr4	140151163	140151241	(50063314)	+	GA-rich	Low_complexity	1	81	(0)	2985797
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
12	19.5	0.0	8.3	chr4	151015367	151015414	(39199141)	+	G-rich	Low_complexity	1	48	(0)	3000636
1939	15.9	0.3	2.3	chr4	169209793	169210093	(21004462)	C	AluJb	SINE/Alu	(15)	297	3	3025983
25731	4.0	0.6	0.1	chr4	173603063	173609186	(16605369)	C	L1PA4	LINE/L1	(1)	6154	7	3031857
22778	10.5	3.4	0.5	chr4	180869853	180876257	(9338298)	C	L1PB1	LINE/L1	(3)	6864	252	3041340
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
292	39.1	1.5	0.0	chr4	183402981	183403113	(6811442)	+	LFSINE_Vert	SINE/tRNA	54	188	(271)	3044884
2129	9.8	0.0	9.8	chr4	183403200	183403527	(6811028)	C	AluSx3	SINE/Alu	(14)	297	2	3044885
1097	23.0	0.9	0.0	chr4	186217944	186218156	(3996399)	C	MER58A	DNA/hAT-Charlie	(6)	218	4	3049364
216	17.2	6.5	4.9	chr4	186218170	186218230	(3996325)	+	L3	LINE/CR1	4025	4086	(13)	3049365
13	28.1	0.0	4.9	chr5	892783	892843	(180645416)	+	(GCCGG)n	Simple_repeat	1	61	(0)	3055779
17	24.0	3.0	2.9	chr5	892898	892964	(180645295)	+	(GGCGGC)n	Simple_repeat	1	69	(0)	3055780
222	5.5	5.1	1.1	chr5	983588	983937	(180554322)	+	(GT)n	Simple_repeat	1	368	(0)	3055865
209	37.1	2.8	1.9	chr5	1662527	1662633	(179875626)	C	L3	LINE/CR1	(236)	3863	3756	3056506
188	34.4	3.8	3.8	chr5	1662658	1662790	(179875469)	C	MamRTE1	LINE/RTE-BovB	(59)	3753	3621	3056507
90	31.8	1.9	2.6	chr5	1662792	1663208	(179875051)	+	(TGTC)n	Simple_repeat	1	425	(0)	3056508
184	30.6	7.5	0.0	chr5	1663226	1663287	(179874972)	+	UCON71_Crp	Unknown	185	251	(26)	3056509
332	22.9	6.7	3.0	chr5	1929062	1930478	(179607781)	+	(GTGTCGT)n	Simple_repeat	1	1512	(0)	3056791
254	28.9	3.3	0.4	chr5	1960429	1961298	(179576961)	+	(CA)n	Simple_repeat	1	899	(0)	3056820
884	18.9	5.4	2.8	chr5	2678095	2678345	(178859914)	C	L1M3	LINE/L1	(743)	5397	5140	3057541
1082	27.2	8.3	4.2	chr5	3446942	3447539	(178090720)	+	L1M5	LINE/L1	4647	5271	(875)	3058342
421	15.2	0.0	0.0	chr5	5523237	5523302	(176014957)	+	MER41C	LTR/ERV1	1	66	(455)	3060644
326	9.5	0.0	0.0	chr5	5523299	5523340	(176014919)	+	MER41C	LTR/ERV1	25	66	(455)	3060644
329	7.0	2.3	0.0	chr5	5523335	5523377	(176014882)	+	MER41C	LTR/ERV1	23	66	(455)	3060644
261	8.3	2.7	0.0	chr5	5523374	5523409	(176014850)	+	MER41C	LTR/ERV1	25	61	(460)	3060644
3768	8.0	1.4	0.0	chr5	5523410	5523899	(176014360)	+	MER41C	LTR/ERV1	25	521	(0)	3060644
1469	18.6	2.9	11.0	chr5	6420071	6420497	(175117762)	C	MLT1B	LTR/ERVL-MaLR	(0)	505	1	3061828
371	32.4	9.3	8.5	chr5	6690420	6690750	(174847509)	+	L1MEg	LINE/L1	1730	2063	(4021)	3062188
876	13.9	0.8	0.0	chr5	6690754	6690875	(174847384)	+	AluJo	SINE/Alu	1	123	(189)	3062189
47	0.0	2.3	0.0	chr5	6690892	6690935	(174847324)	+	(AC)n	Simple_repeat	1	45	(0)	3062190
772	20.4	1.8	0.6	chr5	6690982	6691164	(174847095)	C	L1MEc	LINE/L1	(1406)	4913	4729	3062186
21	16.7	2.1	0.0	chr5	10354121	10354167	(171184092)	+	G-rich	Low_complexity	1	48	(0)	3066756
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
12	26.1	2.2	2.2	chr5	14143247	14143291	(167394968)	+	(CTTTC)n	Simple_repeat	1	46	(0)	3071857
403	36.0	0.5	0.8	chr5	14402472	14404193	(167134066)	+	(TGG)n	Simple_repeat	1	1731	(0)	3072148
2227	10.8	0.7	0.0	chr5	16909227	16909523	(164628736)	+	AluSx3	SINE/Alu	1	299	(12)	3075755
2477	11.3	0.3	5.0	chr5	16909524	16909693	(164628566)	C	THE1B	LTR/ERVL-MaLR	(209)	155	1	3075754
2357	16.3	2.9	0.5	chr5	16909703	16910110	(164628149)	+	MSTB1	LTR/ERVL-MaLR	15	432	(0)	3075756
55	0.0	0.0	0.0	chr5	16912803	16912849	(164625410)	+	(CA)n	Simple_repeat	1	47	(0)	3075765
13	24.6	2.3	0.0	chr5	17344030	17344072	(164194187)	+	(GTGTCT)n	Simple_repeat	1	44	(0)	3076674
2339	11.7	0.3	0.0	chr5	31532956	31533253	(150005006)	C	AluSx	SINE/Alu	(13)	299	1	3095070
697	19.6	6.4	4.1	chr5	31638707	31638903	(149899356)	+	MamRep488	DNA/hAT-Tip100	15	216	(3)	3095274
2331	9.4	0.0	0.7	chr5	32172414	32172722	(149365537)	+	AluSc	SINE/Alu	1	307	(2)	3096319
1104	6.5	7.3	0.0	chr5	32172723	32172861	(149365398)	+	AluSp	SINE/Alu	134	283	(30)	3096320
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
2340	8.3	0.0	4.9	chr5	32313455	32313634	(149224625)	C	AluSq2	SINE/Alu	(3)	310	139	3096592
36	0.0	0.0	0.0	chr5	32313635	32313665	(149224594)	+	(TG)n	Simple_repeat	1	31	(0)	3096593
2128	8.8	0.0	0.0	chr5	32313666	32313928	(149224331)	C	AluSg	SINE/Alu	(42)	268	6	3096594
18	3.7	3.6	0.0	chr5	32444238	32444265	(149093994)	+	(GCC)n	Simple_repeat	1	29	(0)	3096861
15	20.0	1.9	7.4	chr5	32444368	32444420	(149093839)	+	GA-rich	Low_complexity	1	54	(0)	3096862
442	32.2	7.0	4.2	chr5	34619678	34620275	(146917984)	C	L2a	LINE/L2	(93)	3333	2706	3100109
4179	12.2	1.4	2.5	chr5	34626142	34626811	(146911448)	+	Tigger3b	DNA/TcMar-Tigger	1	662	(569)	3100125
13	9.6	0.0	0.0	chr5	36242066	36242088	(145296171)	+	(TTTG)n	Simple_repeat	1	23	(0)	3102474
203	30.5	8.5	0.8	chr5	36739735	36739853	(144798406)	C	L2c	LINE/L2	(85)	3302	3174	3103270
255	30.9	0.0	0.0	chr5	36739925	36739992	(144798267)	C	Plat_L3	LINE/CR1	(244)	3342	3275	3103271
2534	7.1	0.3	0.0	chr5	36872366	36872673	(144665586)	+	AluY	SINE/Alu	1	309	(2)	3103481
914	23.6	0.5	0.5	chr5	38192951	38193163	(143345096)	C	MIR	SINE/MIR	(26)	236	24	3105720
13	19.5	2.9	0.0	chr5	38250857	38250891	(143287368)	+	(CTTCC)n	Simple_repeat	1	36	(0)	3105820
53	0.0	6.8	0.0	chr5	38250989	38251047	(143287212)	+	(TG)n	Simple_repeat	1	63	(0)	3105821
13	17.6	0.0	2.9	chr5	38251060	38251093	(143287166)	+	(ATTTT)n	Simple_repeat	1	34	(0)	3105822
1641	23.6	4.3	1.6	chr5	38426546	38426975	(143111284)	C	MLT1J2	LTR/ERVL-MaLR	(6)	442	1	3106114
435	31.6	4.8	0.0	chr5	38693378	38693535	(142844724)	+	MIR	SINE/MIR	3	168	(94)	3106509
38	2.8	0.0	0.0	chr5	38693676	38693712	(142844547)	+	(TG)n	Simple_repeat	1	37	(0)	3106510
2504	8.0	0.0	0.0	chr5	38807280	38807568	(142730691)	+	AluSg	SINE/Alu	2	290	(20)	3106706
14	19.9	4.2	2.0	chr5	39074435	39074482	(142463777)	+	(CCCCG)n	Simple_repeat	1	50	(0)	3107042
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
12	16.3	5.4	9.0	chr5	41904484	41904557	(139633702)	+	G-rich	Low_complexity	1	78	(0)	3110987
12	19.8	3.9	5.6	chr5	42423657	42423708	(139114551)	+	(CCCT)n	Simple_repeat	1	54	(0)	3111600
36	27.6	2.4	0.8	chr5	42423774	42423896	(139114363)	+	(GCG)n	Simple_repeat	1	126	(0)	3111601
2749	2.9	0.0	0.3	chr5	43018574	43018883	(138519376)	+	AluY	SINE/Alu	1	309	(2)	3112413
2298	10.2	0.0	0.0	chr5	43064333	43064635	(138473624)	+	AluSx	SINE/Alu	2	304	(8)	3112477
1891	15.9	20.4	3.2	chr5	43064636	43064675	(138473584)	+	MER61D	LTR/ERV1	465	501	(0)	3112476
3395	8.1	3.1	4.6	chr5	43336125	43336643	(138201616)	C	LTR10F	LTR/ERV1	(0)	511	1	3112929
31	3.3	0.0	0.0	chr5	52989806	52989836	(128548423)	+	(AC)n	Simple_repeat	1	31	(0)	3119684
19	12.1	0.0	0.0	chr5	53426101	53426128	(128112131)	+	(A)n	Simple_repeat	1	28	(0)	3120238
368	23.8	0.0	0.0	chr5	53426175	53426258	(128112001)	C	MamRep564	Unknown	(74)	283	200	3120239
366	28.2	11.2	0.7	chr5	53426314	53426456	(128111803)	C	MamRep1879	DNA/hAT-Tip100?	(41)	175	16	3120240
12	14.6	0.0	5.9	chr5	55308084	55308117	(126230142)	+	A-rich	Low_complexity	1	34	(0)	3123045
752	24.0	7.8	7.8	chr5	56812040	56812373	(124725886)	C	Tigger13a	DNA/TcMar-Tigger	(436)	335	2	3125607
13	8.7	0.0	14.0	chr5	56909853	56909902	(124628357)	+	G-rich	Low_complexity	1	50	(0)	3125753
2849	7.5	0.8	1.1	chr5	57302007	57302382	(124235877)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3126566
357	25.6	4.7	10.3	chr5	57302404	57302628	(124235631)	+	MIRc	SINE/MIR	33	244	(24)	3126567
1935	23.1	11.9	0.8	chr5	57335055	57335699	(124202560)	+	Kanga1c	DNA/TcMar-Tc2	2	722	(7)	3126625
27	18.4	3.9	2.5	chr5	65035559	65035636	(116502623)	+	(GGAGGCG)n	Simple_repeat	1	81	(0)	3137271
1914	28.8	9.0	1.9	chr5	65554961	65555968	(115982291)	C	L2a	LINE/L2	(0)	3426	2320	3138016
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
13	30.8	0.0	3.2	chr5	66144565	66144627	(115393632)	+	G-rich	Low_complexity	1	63	(0)	3139020
264	33.6	11.4	2.7	chr5	66891319	66891719	(114646540)	+	L2	LINE/L2	2643	3082	(337)	3140079
5347	4.1	0.7	0.0	chr5	67778913	67780009	(113758250)	+	L1P1	LINE/L1	4681	5781	(374)	3141242
25413	4.1	0.3	0.3	chr5	67780008	67786186	(113752073)	+	L1PA3	LINE/L1	1	6155	(0)	3141244
2407	12.6	0.3	0.0	chr5	68033480	68033789	(113504470)	+	AluSz	SINE/Alu	1	311	(1)	3141603
2420	17.8	1.9	0.7	chr5	68554369	68554844	(112983415)	C	L1MD1	LINE/L1	(256)	5986	5504	3142433
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
12	4.1	3.5	6.7	chr5	69167324	69167352	(112370907)	+	(CTGC)n	Simple_repeat	1	30	(0)	3143407
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
1710	10.3	4.8	8.0	chr5	69333085	69333214	(112205045)	+	AluJr	SINE/Alu	6	137	(175)	3143799
2154	10.0	0.7	0.3	chr5	69501920	69502210	(112036049)	+	AluSx	SINE/Alu	5	296	(16)	3144200
15	12.4	2.6	5.0	chr5	71455695	71455733	(110082526)	+	(GCG)n	Simple_repeat	1	40	(0)	3147474
43	0.0	0.0	0.0	chr5	71957057	71957093	(109581166)	+	(CA)n	Simple_repeat	1	37	(0)	3148294
17	0.0	0.0	0.0	chr5	71957094	71957112	(109581147)	+	(TC)n	Simple_repeat	1	19	(0)	3148295
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
2990	5.1	0.3	0.0	chr5	72150496	72150846	(109387413)	C	L1PA13	LINE/L1	(1)	6162	5811	3148559
2168	17.2	7.0	3.4	chr5	72150982	72151421	(109386838)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3148560
12	7.2	6.5	3.0	chr5	72566067	72566097	(108972162)	+	(TTGTTA)n	Simple_repeat	1	33	(0)	3149175
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
2233	9.8	0.0	3.9	chr5	73082877	73083183	(108455076)	C	AluSc5	SINE/Alu	(14)	295	1	3149971
248	6.5	0.0	0.0	chr5	73083187	73083217	(108455042)	C	U2	snRNA	(1)	187	157	3149972
1267	25.6	8.9	7.8	chr5	73188750	73189224	(108349035)	C	MLT1J	LTR/ERVL-MaLR	(31)	481	1	3150136
24	16.6	2.1	0.0	chr5	73189232	73189278	(108348981)	+	(CT)n	Simple_repeat	1	48	(0)	3150137
378	24.8	9.2	0.8	chr5	73394287	73394416	(108143843)	C	L2a	LINE/L2	(0)	3426	3285	3150411
236	33.3	1.0	2.0	chr5	73394441	73394541	(108143718)	C	MER102a	DNA/hAT-Charlie	(0)	330	231	3150412
586	32.5	12.0	4.5	chr5	74019634	74020663	(107517596)	C	L2c	LINE/L2	(632)	2787	1670	3151381
96	25.9	0.2	0.5	chr5	74061177	74061596	(107476663)	+	(TG)n	Simple_repeat	1	418	(0)	3151440
338	27.1	15.0	1.9	chr5	74061601	74061814	(107476445)	+	L1MEh	LINE/L1	166	412	(1823)	3151439
31	0.0	0.0	0.0	chr5	74250870	74250896	(107287363)	+	(CA)n	Simple_repeat	1	27	(0)	3151698
27	14.7	0.0	0.0	chr5	74250942	74250986	(107287273)	+	(CA)n	Simple_repeat	1	45	(0)	3151698
12	18.1	0.0	3.0	chr5	74685110	74685142	(106853117)	+	G-rich	Low_complexity	1	33	(0)	3152359
14	17.6	0.0	0.0	chr5	74685356	74685387	(106852872)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3152360
12	19.5	2.6	2.6	chr5	75511521	75511558	(106026701)	+	A-rich	Low_complexity	1	39	(0)	3153649
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
2107	15.1	0.8	4.3	chr5	78369010	78369108	(103169151)	C	Tigger1	DNA/TcMar-Tigger	(2011)	407	314	3158032
2383	9.7	0.0	0.0	chr5	78369109	78369406	(103168853)	C	AluSx	SINE/Alu	(14)	298	1	3158033
2107	15.1	0.8	4.3	chr5	78369407	78369700	(103168559)	C	Tigger1	DNA/TcMar-Tigger	(2105)	313	28	3158032
1768	17.0	0.0	0.7	chr5	78669152	78669422	(102868837)	+	AluJb	SINE/Alu	6	274	(38)	3158408
119	11.9	2.4	4.4	chr5	78669427	78669672	(102868587)	+	GA-rich	Low_complexity	1	252	(0)	3158409
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
376	26.7	10.6	3.6	chr5	79771676	79771815	(101766444)	C	MIRb	SINE/MIR	(71)	197	47	3160342
11	12.8	8.7	4.0	chr5	79991100	79991145	(101547114)	+	(CCTGCGC)n	Simple_repeat	1	50	(0)	3160666
187	36.5	4.9	6.0	chr5	80082604	80082769	(101455490)	C	MIRc	SINE/MIR	(13)	255	92	3160812
14	11.7	0.0	3.3	chr5	81422738	81422767	(100115492)	+	(CAAAG)n	Simple_repeat	1	30	(0)	3163139
12	22.4	0.0	2.6	chr5	81422845	81422882	(100115377)	+	(CATCA)n	Simple_repeat	1	38	(0)	3163140
1836	17.7	0.7	0.7	chr5	81588788	81589087	(99949172)	+	AluJb	SINE/Alu	7	306	(6)	3163367
545	30.7	5.8	2.5	chr5	81589098	81589414	(99948845)	+	CR1_Mam	LINE/CR1	331	658	(1546)	3163368
54	0.0	0.0	0.0	chr5	81736144	81736189	(99802070)	+	(AC)n	Simple_repeat	1	46	(0)	3163544
271	22.4	1.3	3.3	chr5	81736295	81736378	(99801881)	+	L2a	LINE/L2	3302	3426	(0)	3163545
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
2880	11.4	3.5	2.9	chr5	82969116	82969614	(98568645)	C	LTR10F	LTR/ERV1	(43)	590	1	3165350
1813	9.7	3.8	29.2	chr5	82975612	82976282	(98561977)	C	LTR10F	LTR/ERV1	(16)	495	2	3165353
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
250	22.0	2.0	0.0	chr5	83509980	83510029	(98028230)	C	L2b	LINE/L2	(3)	3372	3322	3166056
12	14.4	6.2	0.0	chr5	87268414	87268445	(94269814)	+	G-rich	Low_complexity	1	34	(0)	3170896
19	26.6	0.0	0.0	chr5	87268723	87268776	(94269483)	+	(CTG)n	Simple_repeat	1	54	(0)	3170897
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
31	3.3	0.0	0.0	chr5	93582772	93582802	(87955457)	+	(GT)n	Simple_repeat	1	31	(0)	3178831
4448	18.7	5.8	3.8	chr5	93967813	93969233	(87569026)	+	L1MCa	LINE/L1	592	2139	(4612)	3179277
34	2.8	2.7	0.0	chr5	94690922	94690958	(86847301)	+	(GT)n	Simple_repeat	1	38	(0)	3180172
188	35.4	0.0	7.5	chr5	94691105	94691211	(86847048)	+	Penelope1_Vert	LINE/Penelope	344	442	(645)	3180173
8747	11.8	3.4	1.9	chr5	95178045	95178366	(86359893)	+	L1PBa	LINE/L1	961	1310	(5552)	3180781
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
1902	24.6	4.2	5.1	chr5	95712239	95712860	(85825399)	+	MLT1G	LTR/ERVL-MaLR	3	591	(0)	3181555
1850	6.2	0.9	0.0	chr5	95834684	95834908	(85703351)	C	AluSc	SINE/Alu	(9)	300	74	3181736
17	9.3	0.0	7.5	chr5	98928662	98928701	(82609558)	+	G-rich	Low_complexity	1	40	(0)	3185758
30	31.9	0.0	5.2	chr5	98928804	98928956	(82609303)	+	(CGC)n	Simple_repeat	1	153	(0)	3185759
10826	7.5	1.7	7.2	chr5	102154759	102156429	(79381830)	+	LTR12C	LTR/ERV1	3	1579	(0)	3189776
9665	12.3	1.6	7.9	chr5	108684501	108686389	(72851870)	C	L1P2	LINE/L1	(4409)	1775	8	3197971
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
16	0.0	0.0	0.0	chr5	109409818	109409834	(72128425)	+	(A)n	Simple_repeat	1	17	(0)	3198946
13	29.5	0.0	2.0	chr5	109409882	109409932	(72128327)	+	(CCT)n	Simple_repeat	1	51	(0)	3198947
28	7.5	0.0	2.3	chr5	109409942	109409985	(72128274)	+	(GCG)n	Simple_repeat	1	44	(0)	3198948
1749	8.1	0.0	1.4	chr5	112959577	112959815	(68578444)	C	AluSx3	SINE/Alu	(0)	311	74	3203611
2188	12.6	2.7	0.7	chr5	112959820	112960113	(68578146)	C	AluSc5	SINE/Alu	(9)	300	1	3203612
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
58	22.1	1.5	8.4	chr5	115296655	115296913	(66241346)	+	G-rich	Low_complexity	1	263	(0)	3206588
199	24.3	7.5	6.3	chr5	115873381	115873459	(65664800)	C	L3	LINE/CR1	(1101)	2998	2919	3207414
16	11.1	0.0	0.0	chr5	116085200	116085228	(65453031)	+	(GGTGG)n	Simple_repeat	1	29	(0)	3207708
9529	23.7	5.7	3.5	chr5	118405536	118406346	(63131913)	C	L1PA10	LINE/L1	(5521)	832	4	3210796
25	23.3	0.0	4.0	chr5	122774960	122775035	(58763224)	+	G-rich	Low_complexity	1	76	(0)	3216418
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
13953	10.7	2.4	0.1	chr5	123667595	123670193	(57868066)	+	L1PA13	LINE/L1	3519	6161	(2)	3217709
16	9.7	0.0	0.0	chr5	124179898	124179919	(57358340)	+	(T)n	Simple_repeat	1	22	(0)	3218326
15	18.5	0.0	6.1	chr5	124735404	124735452	(56802807)	+	(GCCCAGG)n	Simple_repeat	1	49	(0)	3219039
2004	20.9	16.8	4.9	chr5	124963172	124963803	(56574456)	+	MER61-int	LTR/ERV1	1	707	(4510)	3219446
15530	10.3	2.6	2.7	chr5	124963880	124966685	(56571574)	+	MER61-int	LTR/ERV1	2216	6072	(1133)	3219446
398	17.9	0.0	0.0	chr5	125401753	125401819	(56136440)	+	MER94	DNA/hAT-Blackjack	54	120	(14)	3220023
12622	11.0	3.3	1.6	chr5	125442389	125444418	(56093841)	+	L1PB1	LINE/L1	3122	5210	(1652)	3220065
2155	13.5	5.6	1.4	chr5	125444419	125444779	(56093480)	+	THE1D	LTR/ERVL-MaLR	5	381	(0)	3220066
12622	14.8	3.3	3.6	chr5	125444780	125445075	(56093184)	+	L1PB1	LINE/L1	5207	5507	(1360)	3220065
36	0.0	0.0	0.0	chr5	125550455	125550485	(55987774)	+	(GT)n	Simple_repeat	1	31	(0)	3220180
14	9.3	5.6	2.6	chr5	126601149	126601184	(54937075)	+	(GGAGCCA)n	Simple_repeat	1	38	(0)	3221499
17	12.5	0.0	0.0	chr5	126777237	126777262	(54760997)	+	(GT)n	Simple_repeat	1	26	(0)	3221959
2549	5.7	0.0	1.0	chr5	128082079	128082379	(53455880)	+	AluY	SINE/Alu	1	298	(13)	3223721
185	26.4	1.9	3.6	chr5	128436008	128436062	(53102197)	+	OldhAT1	DNA/hAT-Ac	1686	1739	(1109)	3224140
26250	4.5	0.7	0.1	chr5	130897567	130903669	(50634590)	+	L1PA3	LINE/L1	13	6152	(3)	3227119
23238	3.3	0.2	0.1	chr5	131308076	131312967	(50225292)	C	L1PA3	LINE/L1	(1124)	5022	124	3227747
2454	9.7	0.0	0.0	chr5	131312971	131313281	(50224978)	C	AluY	SINE/Alu	(0)	311	1	3227748
396	27.8	10.0	1.4	chr5	132558283	132558428	(48979831)	+	MIR	SINE/MIR	3	162	(100)	3229558
2465	7.7	0.0	1.9	chr5	132558430	132558742	(48979517)	+	AluSx	SINE/Alu	2	308	(4)	3229559
915	17.0	0.0	6.1	chr5	132558753	132558917	(48979342)	+	AluJb	SINE/Alu	137	291	(21)	3229560
1995	12.0	2.7	0.0	chr5	132807750	132808041	(48730218)	+	AluSq10	SINE/Alu	1	300	(13)	3229957
320	24.9	4.1	0.7	chr5	132867107	132867263	(48670996)	C	MIRb	SINE/MIR	(21)	247	87	3230055
232	19.2	1.9	1.9	chr5	133050968	133051020	(48487239)	C	Arthur1C	DNA/hAT-Tip100	(2)	361	309	3230467
1010	17.4	9.9	0.0	chr5	133051052	133051252	(48487007)	C	Arthur1C	DNA/hAT-Tip100	(130)	233	11	3230467
15	18.1	2.6	0.0	chr5	133052191	133052250	(48486009)	+	(GCCGGA)n	Simple_repeat	1	61	(0)	3230468
27	37.1	1.4	1.4	chr5	133423571	133423709	(48114550)	+	(GGT)n	Simple_repeat	1	141	(0)	3230939
14	25.1	0.0	3.9	chr5	133938385	133938392	(47599867)	+	(TGTTGT)n	Simple_repeat	1	49	(0)	3231611
18	5.1	12.2	0.0	chr5	133938393	133938433	(47599826)	+	(GTTGGA)n	Simple_repeat	1	46	(0)	3231612
2411	5.2	0.0	0.3	chr5	134039323	134039627	(47498632)	C	AluY	SINE/Alu	(6)	305	2	3231812
457	23.8	1.9	8.5	chr5	134039628	134039668	(47498591)	C	MER5B	DNA/hAT-Charlie	(114)	64	25	3231811
35	0.0	0.0	0.0	chr5	134371474	134371505	(47166754)	+	(CGG)n	Simple_repeat	1	32	(0)	3232422
12	18.5	3.6	6.9	chr5	134526881	134526936	(47011323)	+	(CGGCG)n	Simple_repeat	1	58	(0)	3232770
15	15.0	6.5	2.0	chr5	134527187	134527232	(47011027)	+	(TCCC)n	Simple_repeat	1	49	(0)	3232771
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
2182	11.5	0.0	0.3	chr5	134905869	134906173	(46632086)	C	AluSx	SINE/Alu	(8)	304	1	3233622
15	25.4	4.0	3.8	chr5	137516909	137516984	(44021275)	+	G-rich	Low_complexity	1	79	(0)	3237075
543	26.1	23.8	1.2	chr5	137517583	137517912	(44020347)	C	L2	LINE/L2	(437)	2982	2555	3237076
2796	22.4	11.9	0.0	chr5	137795235	137796000	(43742259)	C	Zaphod	DNA/hAT-Tip100	(3161)	870	2	3237526
219	29.2	6.2	11.8	chr5	137833434	137833569	(43704690)	+	MIR3	SINE/MIR	66	193	(15)	3237599
218	42.8	5.9	4.2	chr5	137833689	137833905	(43704354)	C	MamSINE1	SINE/tRNA-RTE	(2)	288	68	3237600
230	33.8	2.7	4.6	chr5	138244140	138244291	(43293968)	+	L2c	LINE/L2	3056	3209	(178)	3238450
509	23.8	6.3	3.5	chr5	138244305	138244474	(43293785)	+	MIRb	SINE/MIR	37	211	(57)	3238451
38	23.0	0.0	0.0	chr5	138465931	138466014	(43072245)	+	(GCA)n	Simple_repeat	1	84	(0)	3238917
1957	12.4	6.2	0.3	chr5	138528865	138529155	(43009104)	+	AluSx	SINE/Alu	1	309	(3)	3239045
18	10.0	0.0	2.9	chr5	138529160	138529193	(43009066)	+	(AAAC)n	Simple_repeat	1	34	(0)	3239046
2159	9.7	0.3	1.0	chr5	138632818	138633127	(42905132)	C	AluSg7	SINE/Alu	(1)	308	1	3239252
540	19.2	0.9	0.9	chr5	138633128	138633232	(42905027)	C	MLT1J	LTR/ERVL-MaLR	(337)	175	71	3239253
1238	25.6	9.1	0.1	chr5	138633274	138633864	(42904395)	+	L2a	LINE/L2	2720	3374	(1)	3239247
590	28.8	6.2	7.3	chr5	138701512	138701950	(42836309)	C	MLT1L	LTR/ERVL-MaLR	(0)	512	150	3239395
40	25.9	2.6	3.1	chr5	138753262	138753416	(42784843)	+	G-rich	Low_complexity	1	159	(0)	3239539
472	25.2	2.0	0.0	chr5	139182358	139182456	(42355803)	+	L2b	LINE/L2	3272	3372	(3)	3240231
14	19.1	1.3	1.3	chr5	139182661	139182704	(42355555)	+	G-rich	Low_complexity	1	44	(0)	3240232
190	8.0	0.0	0.0	chr5	139182721	139182745	(42355514)	C	MIR	SINE/MIR	(10)	252	228	3240233
183	29.1	20.2	1.6	chr5	139258467	139258651	(42279608)	C	L2	LINE/L2	(356)	3063	2836	3240426
222	25.3	14.2	1.1	chr5	139258796	139258887	(42279372)	C	MIRb	SINE/MIR	(106)	156	51	3240427
45	2.4	0.0	0.0	chr5	139272593	139272635	(42265624)	+	(CA)n	Simple_repeat	1	43	(0)	3240464
15	15.5	3.4	8.2	chr5	139648213	139648271	(41889988)	+	GA-rich	Low_complexity	1	61	(0)	3241240
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
12	9.1	7.7	4.8	chr5	139648420	139648458	(41889801)	+	(AGAGC)n	Simple_repeat	1	42	(0)	3241242
14	8.2	0.0	3.6	chr5	139648486	139648513	(41889746)	+	(CCCAG)n	Simple_repeat	1	28	(0)	3241243
416	28.7	7.1	9.0	chr5	140054072	140054461	(41483798)	C	L2-3_Crp	LINE/L2	(1136)	960	579	3241925
224	35.8	4.8	0.6	chr5	140054472	140054651	(41483608)	C	L2a	LINE/L2	(1670)	1749	1562	3241922
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
2181	9.3	0.4	0.0	chr5	140244283	140244561	(41293698)	C	AluSp	SINE/Alu	(32)	281	2	3242238
1287	21.6	7.6	12.8	chr5	140244767	140245228	(41293031)	C	MER63B	DNA/hAT-Blackjack	(0)	436	1	3242239
273	31.6	3.0	0.0	chr5	140363175	140363272	(41174987)	+	MIRc	SINE/MIR	31	131	(137)	3242460
46	6.0	0.0	0.0	chr5	140648008	140648060	(40890199)	+	(GT)n	Simple_repeat	1	53	(0)	3242991
371	30.6	5.8	7.7	chr5	140648156	140648448	(40889811)	+	L2c	LINE/L2	3035	3356	(19)	3242992
196	22.9	2.0	0.0	chr5	140700414	140700461	(40837798)	C	MamRTE1	LINE/RTE-BovB	(3740)	72	24	3243091
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
636	14.9	1.6	1.6	chr5	140726264	140726386	(40811873)	+	L1MC3	LINE/L1	6737	6859	(926)	3243152
2652	28.9	6.3	5.6	chr5	141656921	141658305	(39879954)	C	L2b	LINE/L2	(0)	3375	1992	3244345
15	29.8	0.0	0.0	chr5	141658306	141658347	(39879912)	+	(CA)n	Simple_repeat	1	42	(0)	3244346
260	23.6	2.7	0.0	chr5	141822630	141822701	(39715558)	C	UCON44	Unknown	(108)	75	2	3244686
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
499	27.2	12.7	1.0	chr5	142932372	142932579	(38605680)	C	LTR89	LTR/ERVL?	(228)	651	416	3246915
248	22.9	1.6	0.0	chr5	143247311	143247866	(38290393)	+	(TGGA)n	Simple_repeat	4	568	(0)	3247376
807	15.5	1.4	4.1	chr5	143657947	143658127	(37880132)	C	MER58A	DNA/hAT-Charlie	(2133)	287	1	3248043
259	36.3	2.9	0.7	chr5	143882193	143882328	(37655931)	C	UCON31	Unknown	(164)	290	152	3248412
2467	7.7	0.3	0.0	chr5	143882347	143882643	(37655616)	+	AluSp	SINE/Alu	1	298	(15)	3248413
240	3.9	0.0	1.0	chr5	149345764	149345798	(32192461)	C	MIR1_Amn	SINE/MIR	(79)	151	117	3257534
17	25.0	4.3	5.1	chr5	149358053	149358146	(32180113)	+	(CCG)n	Simple_repeat	1	98	(0)	3257561
256	26.5	3.8	4.7	chr5	149358613	149358719	(32179540)	C	L2b	LINE/L2	(188)	3187	3082	3257562
12	22.6	0.0	2.6	chr5	149730149	149730186	(31808073)	+	(CCCCCG)n	Simple_repeat	1	38	(0)	3258409
22	20.1	4.2	2.7	chr5	149730222	149730293	(31807966)	+	(CCTC)n	Simple_repeat	1	75	(0)	3258410
503	26.1	5.3	3.2	chr5	149999793	149999978	(31538281)	C	L2c	LINE/L2	(469)	2950	2761	3259009
183	22.2	6.9	1.2	chr5	150000001	150000082	(31538177)	C	L2	LINE/L2	(704)	2715	2629	3259012
150	24.1	0.8	0.0	chr5	150263332	150263682	(31274577)	+	(AC)n	Simple_repeat	1	354	(0)	3259566
16	18.4	7.4	4.6	chr5	150357906	150357986	(31180273)	+	(GCGGCCC)n	Simple_repeat	1	87	(0)	3259764
501	14.1	7.6	0.0	chr5	150450124	150450208	(31088051)	+	FLAM_A	SINE/Alu	10	101	(41)	3259966
581	18.1	12.5	1.5	chr5	154835290	154835424	(26702835)	+	MER5B	DNA/hAT-Charlie	20	171	(7)	3268143
2481	6.6	0.0	0.3	chr5	154835577	154835880	(26702379)	C	AluY	SINE/Alu	(8)	303	1	3268144
13	16.9	0.0	8.5	chr5	157731251	157731297	(23806962)	+	GA-rich	Low_complexity	1	47	(0)	3273268
24	9.8	2.2	2.1	chr5	157743954	157743999	(23794260)	+	(GGGCGC)n	Simple_repeat	1	47	(0)	3273292
3175	13.8	1.6	10.3	chr5	157870784	157871264	(23666995)	C	MER44D	DNA/TcMar-Tigger	(247)	458	1	3273495
275	25.0	2.9	1.4	chr5	158424403	158424471	(23113788)	C	MER91A	DNA/hAT-Tip100	(28)	168	99	3274575
455	28.7	5.7	1.2	chr5	158424603	158424771	(23113488)	C	MER5A	DNA/hAT-Charlie	(6)	183	7	3274576
19	27.9	4.0	1.3	chr5	159209582	159209656	(22328603)	+	(GC)n	Simple_repeat	1	78	(0)	3275707
2303	9.2	0.0	2.7	chr5	160008560	160008851	(21529408)	+	AluJb	SINE/Alu	1	284	(28)	3277188
59	0.0	0.0	0.0	chr5	160008852	160008904	(21529355)	+	(AAAT)n	Simple_repeat	1	53	(0)	3277189
13	31.6	3.2	0.0	chr5	160119325	160119386	(21418873)	+	(CGC)n	Simple_repeat	1	64	(0)	3277395
805	19.8	10.2	2.5	chr5	169584179	169584421	(11953838)	+	MER33	DNA/hAT-Charlie	61	324	(0)	3292031
12	10.0	0.0	0.0	chr5	170861996	170862017	(10676242)	+	(GCCG)n	Simple_repeat	1	22	(0)	3294425
17	12.9	4.5	2.2	chr5	170862120	170862163	(10676096)	+	G-rich	Low_complexity	1	46	(0)	3294426
738	33.4	14.0	1.2	chr5	170960343	170960860	(10577399)	+	L2a	LINE/L2	2391	2993	(394)	3294550
1354	10.8	0.6	0.0	chr5	170960870	170961045	(10577214)	C	AluSx1	SINE/Alu	(135)	177	1	3294551
19	18.9	0.0	0.0	chr5	172006555	172006596	(9531663)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	3296455
354	19.8	16.6	7.3	chr5	172098674	172098809	(9439450)	+	MIRb	SINE/MIR	5	155	(113)	3296671
177	20.2	3.0	0.0	chr5	172098849	172099244	(9439015)	+	(CCATCA)n	Simple_repeat	1	408	(0)	3296672
248	36.0	3.5	0.7	chr5	172361631	172361770	(9176489)	+	MIRb	SINE/MIR	22	165	(103)	3297267
375	33.9	4.4	0.0	chr5	172362075	172362204	(9176055)	C	MIRb	SINE/MIR	(16)	252	117	3297268
215	23.5	5.6	0.0	chr5	172437963	172438021	(9100238)	C	L2b	LINE/L2	(0)	3426	3324	3297433
679	33.0	4.7	1.1	chr5	172438111	172438459	(9099800)	+	L2c	LINE/L2	3020	3381	(6)	3297434
1475	6.0	0.0	0.0	chr5	172462129	172462313	(9075946)	+	AluYh3	SINE/Alu	122	306	(5)	3297490
514	28.8	1.8	1.3	chr5	172837381	172837571	(8700688)	+	L2a	LINE/L2	3222	3383	(43)	3298319
721	23.7	6.2	1.9	chr5	172903634	172903848	(8634411)	C	MIR	SINE/MIR	(1)	261	37	3298473
30	18.5	0.0	0.0	chr5	172903962	172904022	(8634237)	+	(CACA)n	Simple_repeat	1	61	(0)	3298474
16	17.7	2.4	2.3	chr5	172904109	172904150	(8634109)	+	(TCCTT)n	Simple_repeat	1	43	(0)	3298475
875	20.8	5.2	2.2	chr5	172904159	172904384	(8633875)	C	L1ME3	LINE/L1	(0)	6162	5930	3298476
2665	2.7	0.0	0.0	chr5	172958945	172959238	(8579021)	+	AluY	SINE/Alu	5	298	(13)	3298606
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
28	20.1	0.0	0.0	chr5	173616546	173616603	(7921656)	+	(GGC)n	Simple_repeat	1	58	(0)	3299921
250	36.4	3.2	0.0	chr5	173766546	173766666	(7771593)	C	Plat_L3	LINE/CR1	(1183)	2403	2279	3300241
2497	4.4	0.7	0.7	chr5	173766735	173767030	(7771229)	+	AluY	SINE/Alu	11	306	(5)	3300242
4159	20.8	8.6	2.0	chr5	174324217	174325385	(7212874)	+	Charlie1	DNA/hAT-Charlie	1456	2708	(73)	3301286
346	33.6	3.6	3.7	chr5	174355259	174355484	(7182775)	C	MIRb	SINE/MIR	(30)	238	13	3301343
1129	35.1	10.5	1.4	chr5	175245318	175246595	(6291664)	C	L2a	LINE/L2	(4)	3422	2002	3303081
22	25.0	4.1	1.3	chr5	175657933	175658005	(5880254)	+	GA-rich	Low_complexity	1	76	(0)	3303858
301	24.1	11.8	0.9	chr5	176447484	176447596	(5090663)	C	MIR3	SINE/MIR	(63)	145	19	3305279
510	23.2	1.1	0.2	chr5	176591513	176592659	(4945600)	+	(GGT)n	Simple_repeat	1	1160	(0)	3305621
403	36.4	8.6	1.6	chr5	176789421	176789733	(4748526)	C	L2a	LINE/L2	(6)	3420	3084	3305996
704	27.1	11.9	8.2	chr5	177006938	177007059	(4531200)	+	L1ME3Cz	LINE/L1	270	394	(603)	3306400
2361	9.0	0.3	0.3	chr5	177007060	177007370	(4530889)	+	AluSx	SINE/Alu	2	312	(0)	3306401
265	29.3	1.9	3.1	chr5	177087437	177087561	(4450698)	C	MIRb	SINE/MIR	(127)	141	18	3306634
238	31.4	0.0	0.0	chr5	177103527	177103596	(4434663)	+	MIRb	SINE/MIR	111	180	(88)	3306657
470	28.4	1.3	2.5	chr5	177103679	177103837	(4434422)	C	MIRb	SINE/MIR	(66)	202	46	3306658
16	25.1	1.7	3.3	chr5	177134341	177134400	(4403859)	+	(GCG)n	Simple_repeat	1	61	(0)	3306743
250	25.7	6.3	0.0	chr5	177379505	177379578	(4158681)	+	L2a	LINE/L2	3346	3424	(2)	3307294
120	11.6	3.5	3.7	chr5	177379713	177379859	(4158400)	+	(TCTT)n	Simple_repeat	1	149	(0)	3307295
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
15	13.4	7.0	2.2	chr5	177592155	177592197	(3946062)	+	(GCG)n	Simple_repeat	1	46	(0)	3307701
228	25.5	0.0	0.0	chr5	178164105	178164151	(3374108)	+	MIR	SINE/MIR	144	190	(72)	3308690
1455	12.7	6.4	0.8	chr5	178625214	178625450	(2912809)	+	AluJb	SINE/Alu	60	310	(2)	3309510
19	9.8	0.0	2.9	chr5	179550513	179550547	(1987712)	+	(GCCC)n	Simple_repeat	1	35	(0)	3311065
24	26.9	0.0	0.0	chr5	179550600	179550667	(1987592)	+	G-rich	Low_complexity	1	68	(0)	3311066
13	15.7	9.3	0.0	chr5	179550804	179550846	(1987413)	+	(GCGCGCT)n	Simple_repeat	1	47	(0)	3311067
547	23.2	0.8	0.8	chr5	179698083	179698208	(1840051)	+	MamRep4096	DNA/hAT-Tip100	1	126	(300)	3311402
2342	7.4	0.6	0.6	chr5	180292807	180293118	(1245141)	+	AluSx1	SINE/Alu	1	312	(0)	3312367
121	15.5	0.5	0.0	chr5	180670182	180670389	(867870)	+	(GTGTGT)n	Simple_repeat	1	209	(0)	3313068
345	17.0	0.0	1.1	chr5	180670390	180670484	(867775)	+	PRIMA4-int	LTR/ERV1	488	581	(7689)	3313069
2468	8.0	0.3	0.0	chr5	181188094	181188405	(349854)	+	AluSp	SINE/Alu	1	313	(0)	3313823
670	1.4	0.0	0.0	chr5	181188416	181188488	(349771)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313824
606	5.6	0.0	0.0	chr5	181206868	181206939	(331320)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3313850
2391	5.5	1.6	0.7	chr5	181218548	181218855	(319404)	+	AluY	SINE/Alu	1	311	(0)	3313882
667	0.0	0.0	0.0	chr5	181221979	181222051	(316208)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	3313889
15	8.8	5.0	4.8	chr5	181235419	181235458	(302801)	+	(CATTA)n	Simple_repeat	1	42	(0)	3313905
29	24.4	0.0	0.0	chr5	181260594	181260665	(277594)	+	(CCT)n	Simple_repeat	1	72	(0)	3313944
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
177	29.1	0.8	0.0	chr6	1068802	1069311	(169736668)	+	(GT)n	Simple_repeat	1	514	(0)	3315592
37	14.8	4.2	3.0	chr6	1382035	1382129	(169423850)	+	(GCGGAG)n	Simple_repeat	1	99	(0)	3316028
345	27.2	1.3	0.2	chr6	1477970	1478873	(169327106)	+	(TGG)n	Simple_repeat	1	916	(0)	3316174
14	8.5	0.0	3.7	chr6	1610527	1610553	(169195426)	+	(GCG)n	Simple_repeat	1	27	(0)	3316389
887	20.9	1.1	2.6	chr6	1697564	1697755	(169108224)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3316482
386	28.1	15.1	2.5	chr6	1771333	1771529	(169034450)	+	MIRb	SINE/MIR	35	260	(8)	3316559
279	31.6	7.2	11.5	chr6	1816199	1816459	(168989520)	C	MIRb	SINE/MIR	(15)	253	5	3316611
18	12.6	0.0	0.0	chr6	2028983	2029009	(168776970)	+	(T)n	Simple_repeat	1	27	(0)	3316863
13	14.8	0.0	3.1	chr6	3227898	3227929	(167578050)	+	(GTCTGG)n	Simple_repeat	1	32	(0)	3318605
76	26.6	3.9	2.5	chr6	3352219	3352527	(167453452)	+	(ACACAG)n	Simple_repeat	1	321	(0)	3318772
1126	21.5	4.0	0.0	chr6	3382592	3382805	(167423174)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	3318809
29	0.0	0.0	2.9	chr6	3511327	3511361	(167294618)	+	(TG)n	Simple_repeat	1	35	(0)	3319017
40	10.5	0.0	0.0	chr6	3511361	3511422	(167294557)	+	(GAGAGA)n	Simple_repeat	1	62	(0)	3319018
1273	25.2	7.4	3.3	chr6	3511574	3511639	(167294340)	+	LTR16A2	LTR/ERVL	10	69	(426)	3319019
183	14.2	7.4	1.5	chr6	3776774	3777219	(167028760)	+	(TG)n	Simple_repeat	1	479	(0)	3319390
12	5.6	0.0	0.0	chr6	4021388	4021406	(166784573)	+	(GCC)n	Simple_repeat	1	19	(0)	3319829
61	29.6	3.0	5.6	chr6	4135582	4135982	(166669997)	+	G-rich	Low_complexity	1	413	(0)	3320017
12029	9.1	1.8	0.5	chr6	4224971	4226581	(166579398)	+	L1P2	LINE/L1	5	1636	(4548)	3320131
199	15.2	0.0	0.0	chr6	4351915	4351947	(166454032)	+	MIR3	SINE/MIR	167	199	(9)	3320307
207	29.1	5.2	8.3	chr6	4351943	4352062	(166453917)	C	MamTip2	DNA/hAT-Tip100	(79)	226	111	3320308
657	28.3	4.8	7.1	chr6	4577174	4577440	(166228539)	+	L1ME4b	LINE/L1	111	372	(520)	3320666
280	32.9	9.2	2.7	chr6	4577745	4577966	(166228013)	+	MLT1K	LTR/ERVL-MaLR	3	240	(355)	3320668
2442	25.2	12.9	4.9	chr6	4793440	4794658	(166011321)	C	L2a	LINE/L2	(421)	2998	1668	3321078
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
37	0.0	0.0	0.0	chr6	6007567	6007598	(164798381)	+	(CA)n	Simple_repeat	1	32	(0)	3322876
23	28.7	3.8	0.0	chr6	6007601	6007680	(164798299)	+	(CG)n	Simple_repeat	1	83	(0)	3322877
52	22.1	3.5	1.4	chr6	6834596	6834747	(163971232)	+	(TC)n	Simple_repeat	1	155	(0)	3324004
13	34.0	1.2	3.7	chr6	6834691	6834771	(163971208)	+	(CCTC)n	Simple_repeat	1	82	(0)	3324005
383	31.6	4.8	1.2	chr6	6834773	6834932	(163971047)	C	MLT1O	LTR/ERVL-MaLR	(345)	197	32	3324006
914	30.8	7.8	0.6	chr6	6834949	6835281	(163970698)	C	LTR16C	LTR/ERVL	(2)	487	129	3324007
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
1614	10.4	20.4	0.0	chr6	8064673	8064942	(162741037)	C	MER44A	DNA/TcMar-Tigger	(0)	339	1	3326106
18	22.7	1.7	3.3	chr6	8435410	8435469	(162370510)	+	(CTC)n	Simple_repeat	1	61	(0)	3326721
449	22.2	9.0	3.4	chr6	10146821	10146997	(160658982)	C	L1M6	LINE/L1	(5467)	1029	842	3329013
17	16.4	1.9	5.6	chr6	10147020	10147072	(160658907)	+	(CCCTCCA)n	Simple_repeat	1	54	(0)	3329014
262	25.0	12.3	2.0	chr6	10147127	10147201	(160658778)	C	L1M6	LINE/L1	(5962)	534	457	3329013
26	0.0	0.0	0.0	chr6	10147202	10147226	(160658753)	+	(GTTTT)n	Simple_repeat	1	25	(0)	3329015
262	25.0	12.3	2.0	chr6	10147227	10147252	(160658727)	C	L1M6	LINE/L1	(6040)	456	421	3329013
413	27.5	0.6	5.3	chr6	10147268	10147436	(160658543)	+	L1M6	LINE/L1	1597	1757	(4739)	3329009
17	0.0	0.0	0.0	chr6	10694904	10694922	(160111057)	+	(T)n	Simple_repeat	1	19	(0)	3330013
247	25.0	5.2	5.2	chr6	10887637	10887771	(159918208)	C	MER5B	DNA/hAT-Charlie	(30)	148	14	3330390
488	26.3	0.0	5.6	chr6	10887955	10888066	(159917913)	C	MIRb	SINE/MIR	(6)	262	156	3330391
2358	5.7	0.0	0.4	chr6	10888067	10888393	(159917586)	C	AluSc	SINE/Alu	(0)	309	2	3330392
23	18.9	0.0	0.0	chr6	11207335	11207383	(159598596)	+	(TGTGTG)n	Simple_repeat	1	49	(0)	3330893
171	32.6	0.5	0.0	chr6	11319316	11319892	(159486087)	+	(CACACA)n	Simple_repeat	1	580	(0)	3331059
54	24.2	5.8	1.8	chr6	12749435	12749641	(158056338)	+	(CTCTCC)n	Simple_repeat	1	219	(0)	3333136
65	23.3	2.1	2.1	chr6	12750423	12750608	(158055371)	+	GA-rich	Low_complexity	1	190	(0)	3333138
20	0.0	0.0	0.0	chr6	13006661	13006682	(157799297)	+	(AC)n	Simple_repeat	1	22	(0)	3333559
463	30.1	4.9	2.3	chr6	13006695	13006871	(157799108)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	228	3333560
355	20.3	1.4	0.0	chr6	13006929	13006997	(157798982)	C	MLT1I	LTR/ERVL-MaLR	(337)	74	5	3333560
470	27.4	8.1	2.5	chr6	13006999	13007279	(157798700)	C	L1ME3G	LINE/L1	(245)	679	490	3333561
829	20.4	3.0	0.6	chr6	13406890	13407052	(157398927)	+	MLT1J	LTR/ERVL-MaLR	30	196	(316)	3334205
2079	20.9	6.5	6.7	chr6	13715302	13715856	(157090123)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	7	3334743
316	31.9	2.9	8.2	chr6	13715887	13715933	(157090046)	+	MamRTE1	LINE/RTE-BovB	3188	3233	(579)	3334744
62	0.0	0.0	0.0	chr6	14491991	14492043	(156313936)	+	(TG)n	Simple_repeat	1	53	(0)	3336084
935	22.0	15.4	2.7	chr6	15754017	15754569	(155051410)	C	MLT2F	LTR/ERVL	(0)	663	3	3338386
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
16	16.9	0.0	0.0	chr6	16146868	16146894	(154659085)	+	A-rich	Low_complexity	1	27	(0)	3339057
38	7.0	0.0	0.0	chr6	16430707	16430752	(154375227)	+	(GT)n	Simple_repeat	1	46	(0)	3339517
13	8.1	3.6	3.5	chr6	16761363	16761390	(154044589)	+	(TGC)n	Simple_repeat	1	29	(0)	3340016
39	1.8	5.0	3.2	chr6	16761485	16761544	(154044435)	+	(CTC)n	Simple_repeat	1	63	(0)	3340017
117	18.6	0.4	0.4	chr6	17000088	17000316	(153805663)	+	(CCAT)n	Simple_repeat	1	230	(0)	3340395
183	26.1	3.0	3.0	chr6	17000334	17000400	(153805579)	C	L2b	LINE/L2	(0)	3375	3309	3340396
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
2186	12.0	0.7	0.0	chr6	17655923	17656221	(153149758)	+	AluSz	SINE/Alu	1	301	(11)	3341530
2272	12.3	0.0	0.3	chr6	18043493	18043801	(152762178)	C	AluSx1	SINE/Alu	(3)	309	2	3342315
2179	14.7	8.2	1.0	chr6	18261916	18262299	(152543680)	+	MSTB	LTR/ERVL-MaLR	1	414	(12)	3342724
28	0.0	0.0	0.0	chr6	20130349	20130374	(150675605)	+	(TTG)n	Simple_repeat	1	26	(0)	3345444
2472	7.2	0.0	0.4	chr6	20130375	20130652	(150675327)	C	AluSg	SINE/Alu	(33)	277	1	3345445
41	0.0	0.0	0.0	chr6	20211970	20212004	(150593975)	+	(AC)n	Simple_repeat	1	35	(0)	3345604
30	26.5	1.1	1.1	chr6	21595008	21595099	(149210880)	+	(CGG)n	Simple_repeat	1	93	(0)	3347916
18	4.5	0.0	0.0	chr6	24358126	24358148	(146447831)	+	(AC)n	Simple_repeat	1	23	(0)	3351756
1299	12.7	1.4	20.7	chr6	24358330	24358692	(146447287)	+	AluJr	SINE/Alu	2	293	(19)	3351757
644	27.3	11.8	4.7	chr6	24743450	24743787	(146062192)	C	MLT1L	LTR/ERVL-MaLR	(125)	485	121	3352455
236	7.9	11.6	0.0	chr6	24743827	24743864	(146062115)	C	MLT1L	LTR/ERVL-MaLR	(567)	43	1	3352455
664	1.4	0.0	0.0	chr6	26322818	26322890	(144483089)	+	tRNA-Arg-CGA	tRNA	1	73	(3)	3355024
443	24.1	3.3	12.6	chr6	26323092	26323290	(144482689)	+	MER5A	DNA/hAT-Charlie	9	188	(1)	3355025
379	25.5	11.7	3.6	chr6	26537048	26537250	(144268729)	+	L2a	LINE/L2	3181	3386	(1)	3355426
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
548	0.0	0.0	21.3	chr6	27020346	27020439	(143785540)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3356155
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
16	19.1	3.3	3.6	chr6	27231219	27231265	(143574714)	+	A-rich	Low_complexity	1	46	(0)	3356542
2376	8.0	0.0	0.3	chr6	27231266	27231586	(143574393)	+	AluSx	SINE/Alu	1	312	(0)	3356543
691	3.7	0.0	0.0	chr6	27297996	27298077	(143507902)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3356672
2181	11.0	0.0	0.7	chr6	27334586	27334877	(143471102)	+	AluSx	SINE/Alu	1	290	(22)	3356731
634	5.3	0.0	0.0	chr6	27334987	27335062	(143470917)	C	tRNA-Lys-AAA	tRNA	(0)	76	1	3356732
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
2913	17.5	6.7	2.4	chr6	27517161	27517573	(143288406)	C	L1MC3	LINE/L1	(49)	7736	7325	3357031
2394	12.3	0.0	0.0	chr6	27517574	27517881	(143288098)	C	AluSx1	SINE/Alu	(4)	308	1	3357032
667	2.8	0.0	0.0	chr6	27519529	27519600	(143286379)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	3357033
754	2.4	0.0	0.0	chr6	27553413	27553494	(143252485)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3357102
15	9.0	12.2	1.8	chr6	27553496	27553544	(143252435)	+	(GACAT)n	Simple_repeat	1	55	(0)	3357103
2277	12.7	0.0	0.9	chr6	27602220	27602534	(143203445)	C	AluSx1	SINE/Alu	(0)	312	1	3357201
595	0.0	0.0	22.2	chr6	27602568	27602675	(143203304)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357202
441	15.1	0.0	1.4	chr6	27618356	27618429	(143187550)	+	tRNA-Thr-ACA	tRNA	1	73	(3)	3357231
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
749	0.0	0.0	0.0	chr6	28213037	28213118	(142592861)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3358258
410	28.1	0.8	1.5	chr6	28225034	28225163	(142580816)	+	Charlie13a	DNA/hAT-Charlie	1376	1504	(10)	3358288
32	3.2	0.0	0.0	chr6	28350085	28350116	(142455863)	+	(TG)n	Simple_repeat	1	32	(0)	3358488
671	0.0	0.0	0.0	chr6	28543115	28543186	(142262793)	C	tRNA-Arg-CGA	tRNA	(4)	72	1	3358801
2287	8.8	0.3	0.0	chr6	28757384	28757677	(142048302)	C	AluSp	SINE/Alu	(16)	297	3	3359168
35	0.0	0.0	0.0	chr6	28790249	28790278	(142015701)	+	(GT)n	Simple_repeat	1	30	(0)	3359223
2416	6.0	1.3	0.0	chr6	28790370	28790670	(142015309)	+	AluSp	SINE/Alu	2	306	(7)	3359224
631	23.5	2.9	0.0	chr6	28803352	28803487	(142002492)	+	AluJo	SINE/Alu	134	273	(39)	3359251
18	0.0	0.0	0.0	chr6	28803489	28803511	(142002468)	+	(AAGC)n	Simple_repeat	1	23	(0)	3359252
47	24.6	0.7	3.5	chr6	28803519	28803658	(142002321)	+	G-rich	Low_complexity	1	141	(0)	3359253
619	1.4	0.0	0.0	chr6	28863685	28863756	(141942223)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359354
10151	11.8	4.0	0.2	chr6	28865488	28867004	(141938975)	C	LTR12C	LTR/ERV1	(0)	1579	3	3359357
2941	19.0	13.0	5.8	chr6	28867005	28867449	(141938530)	C	MER6	DNA/TcMar-Tigger	(393)	472	1	3359356
2564	4.0	1.0	0.3	chr6	28895821	28896121	(141909858)	C	AluY	SINE/Alu	(6)	305	3	3359410
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
2493	6.9	0.3	0.0	chr6	28898109	28898411	(141907568)	C	AluSg	SINE/Alu	(6)	304	1	3359415
2020	12.1	2.0	1.4	chr6	28898431	28898727	(141907252)	C	AluSz	SINE/Alu	(12)	300	2	3359416
624	1.2	0.0	20.8	chr6	28941053	28941158	(141864821)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	3359510
722	0.0	0.0	0.0	chr6	28943622	28943703	(141862276)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3359515
656	1.4	0.0	0.0	chr6	28951029	28951101	(141854878)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359526
473	31.1	11.7	7.4	chr6	29016881	29017519	(141788460)	+	MamGypLTR3	LTR/Gypsy	208	877	(17)	3359639
308	25.6	12.4	4.3	chr6	30648039	30648201	(140157778)	C	MIRb	SINE/MIR	(0)	268	91	3361954
12	30.0	0.0	4.8	chr6	30720277	30720338	(140085641)	+	(CCCG)n	Simple_repeat	1	62	(0)	3362083
2190	9.6	1.7	0.0	chr6	31197229	31197520	(139608459)	C	AluSx1	SINE/Alu	(14)	298	2	3363000
12	19.7	0.0	5.1	chr6	31546483	31546521	(139259458)	+	(CTGCCAG)n	Simple_repeat	1	39	(0)	3363479
15	16.0	2.9	0.0	chr6	31547391	31547425	(139258554)	+	(CCCTC)n	Simple_repeat	1	36	(0)	3363481
1756	16.4	0.0	5.5	chr6	31598273	31598582	(139207397)	C	AluJr	SINE/Alu	(19)	293	1	3363583
1914	14.9	0.3	0.3	chr6	31609343	31609624	(139196355)	+	AluJb	SINE/Alu	1	282	(30)	3363615
40	4.9	0.0	0.0	chr6	31609643	31609685	(139196294)	+	(TG)n	Simple_repeat	1	43	(0)	3363616
2269	23.8	11.2	7.0	chr6	31609686	31610427	(139195552)	+	MER21C	LTR/ERVL	126	902	(36)	3363617
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
47	0.0	0.0	0.0	chr6	31652321	31652360	(139153619)	+	(AC)n	Simple_repeat	1	40	(0)	3363672
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
2136	12.2	0.0	1.4	chr6	31741386	31741681	(139064298)	C	AluSx3	SINE/Alu	(19)	292	1	3363807
2154	14.1	4.6	7.2	chr6	31741710	31742153	(139063826)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3363808
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
183	21.1	2.6	0.0	chr6	31796137	31796174	(139009805)	+	MIR3	SINE/MIR	109	147	(61)	3363904
2228	11.0	0.7	1.9	chr6	31796179	31796291	(139009688)	+	AluSx	SINE/Alu	1	113	(199)	3363905
2312	7.3	2.6	0.3	chr6	31863224	31863524	(138942455)	C	AluSx	SINE/Alu	(4)	308	1	3364051
1759	7.5	0.0	3.1	chr6	32130508	32130735	(138675244)	+	AluSx	SINE/Alu	92	312	(0)	3364427
1823	6.2	8.3	0.0	chr6	32130742	32130983	(138674996)	+	AluSq2	SINE/Alu	1	264	(49)	3364428
2074	8.1	0.4	0.7	chr6	32130988	32131259	(138674720)	+	AluSc5	SINE/Alu	36	306	(3)	3364429
31	9.3	0.0	0.0	chr6	32583974	32584017	(138221962)	+	(CT)n	Simple_repeat	1	44	(0)	3365101
48	0.0	0.0	0.0	chr6	32584018	32584058	(138221921)	+	(CA)n	Simple_repeat	1	41	(0)	3365102
2437	11.4	0.7	0.0	chr6	32636814	32637119	(138168860)	+	AluSx1	SINE/Alu	1	308	(4)	3365180
467	31.5	8.9	0.9	chr6	32940454	32940651	(137865328)	C	L2b	LINE/L2	(4)	3422	3214	3365635
52465	8.6	0.3	0.5	chr6	33049698	33056518	(137749461)	+	HERVK22-int	LTR/ERVK	3	6808	(29)	3365803
753	22.1	0.6	3.1	chr6	33144383	33144545	(137661434)	C	AluJb	SINE/Alu	(31)	281	123	3365897
2198	9.7	0.3	0.3	chr6	33160255	33160542	(137645437)	+	AluSc	SINE/Alu	8	295	(14)	3365934
25	33.3	1.7	4.9	chr6	33201410	33201589	(137604390)	+	(CCATGG)n	Simple_repeat	1	183	(0)	3365970
16	26.1	4.6	3.3	chr6	33208607	33208693	(137597286)	+	(GGCGGC)n	Simple_repeat	1	91	(0)	3365977
20	2.5	9.5	2.2	chr6	33317743	33317784	(137488195)	+	(CCTCCG)n	Simple_repeat	1	46	(0)	3366188
247	33.1	6.1	0.0	chr6	33571611	33571734	(137234245)	+	MIRb	SINE/MIR	123	254	(14)	3366761
32	22.3	0.0	0.0	chr6	33744462	33744534	(137061445)	+	(GTGT)n	Simple_repeat	1	73	(0)	3367062
30	0.0	0.0	0.0	chr6	33789334	33789362	(137016617)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3367133
204	30.9	1.2	6.9	chr6	33789412	33789498	(137016481)	+	L2b	LINE/L2	3294	3375	(0)	3367134
39	27.9	2.1	2.0	chr6	34392500	34392642	(136413337)	+	(CCG)n	Simple_repeat	1	146	(0)	3368274
12	13.7	0.0	0.0	chr6	34696759	34696782	(136109197)	+	(ACTC)n	Simple_repeat	1	24	(0)	3368935
251	22.5	3.6	5.9	chr6	35045076	35045160	(135760819)	+	Tigger3	DNA/TcMar-Tigger	1586	1668	(1361)	3369656
8325	21.2	7.5	6.0	chr6	35096061	35097251	(135708728)	+	MER65-int	LTR/ERV1	12	1216	(3655)	3369713
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
181	9.4	0.0	11.1	chr6	35726433	35726468	(135079511)	+	MIRb	SINE/MIR	188	219	(49)	3371012
54	0.0	0.0	0.0	chr6	35726537	35726582	(135079397)	+	(CA)n	Simple_repeat	1	46	(0)	3371013
1958	14.6	0.0	3.2	chr6	36286677	36286984	(134518995)	C	AluJo	SINE/Alu	(13)	299	2	3372165
3726	13.1	1.6	0.0	chr6	36353014	36353561	(134452418)	C	MER41D	LTR/ERV1	(0)	557	1	3372315
4435	17.6	2.1	4.0	chr6	36353562	36353626	(134452353)	C	L1MB7	LINE/L1	(719)	5465	5405	3372313
2375	11.1	1.1	5.0	chr6	36353627	36354005	(134451974)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3372316
4435	18.4	10.6	1.3	chr6	36354006	36355385	(134450594)	C	L1MB7	LINE/L1	(780)	5404	3847	3372313
46	2.3	0.0	0.0	chr6	36680308	36680351	(134125628)	+	(GT)n	Simple_repeat	1	44	(0)	3373075
17	27.3	1.6	1.6	chr6	36986054	36986116	(133819863)	+	(AGCTCC)n	Simple_repeat	1	64	(0)	3373669
378	23.6	6.6	5.9	chr6	37091933	37092067	(133713912)	+	L1ME4b	LINE/L1	757	892	(0)	3373917
117	25.5	1.6	3.1	chr6	37204029	37204411	(133601568)	+	(ACACAA)n	Simple_repeat	1	389	(0)	3374229
1890	23.2	5.2	4.3	chr6	37240131	37240685	(133565294)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3374322
13	13.7	0.0	0.0	chr6	37240690	37240714	(133565265)	+	(TATG)n	Simple_repeat	1	25	(0)	3374323
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
37	7.2	0.0	0.0	chr6	37524024	37524068	(133281911)	+	(TG)n	Simple_repeat	1	45	(0)	3374822
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
2442	6.8	0.0	3.3	chr6	37844733	37845039	(132960940)	+	AluY	SINE/Alu	1	297	(14)	3375486
242	22.2	10.9	6.2	chr6	37845040	37845076	(132960903)	C	MLT1H1	LTR/ERVL-MaLR	(66)	423	381	3375485
662	23.2	1.5	0.1	chr6	37845060	37845217	(132960762)	C	MLT1H1	LTR/ERVL-MaLR	(346)	203	2	3375485
274	34.0	0.4	0.1	chr6	40350154	40351126	(130454853)	+	(CA)n	Simple_repeat	1	977	(0)	3379324
13	13.2	0.0	0.0	chr6	40587342	40587366	(130218613)	+	(TGTG)n	Simple_repeat	1	25	(0)	3379731
16	14.2	0.0	0.0	chr6	40587387	40587417	(130218562)	+	(CACACA)n	Simple_repeat	1	31	(0)	3379732
43	2.5	0.0	0.0	chr6	40587494	40587534	(130218445)	+	(CA)n	Simple_repeat	1	41	(0)	3379733
15	12.7	0.0	5.3	chr6	41073547	41073584	(129732395)	+	(CTCCCCG)n	Simple_repeat	1	38	(0)	3380582
1880	16.0	4.4	0.3	chr6	41320477	41320802	(129485177)	C	LTR18C	LTR/ERVL	(5)	340	1	3380945
2324	10.8	0.0	0.0	chr6	41320849	41321144	(129484835)	C	AluSx	SINE/Alu	(16)	296	1	3380946
193	34.9	0.0	0.0	chr6	41449899	41449961	(129356018)	C	L2b	LINE/L2	(7)	3419	3357	3381182
684	29.8	5.5	2.0	chr6	41450055	41450301	(129355678)	+	MIR	SINE/MIR	6	261	(1)	3381183
29	20.4	1.2	3.7	chr6	41456713	41456793	(129349186)	+	(CTCC)n	Simple_repeat	1	82	(0)	3381196
19	14.0	0.0	2.4	chr6	42453070	42453110	(128352869)	+	G-rich	Low_complexity	1	41	(0)	3383279
2003	14.9	0.0	0.7	chr6	42797692	42797993	(128007986)	+	AluSx	SINE/Alu	1	300	(12)	3384060
2058	15.9	1.1	0.8	chr6	42798000	42798360	(128007619)	+	L1PA17	LINE/L1	5804	6165	(1)	3384061
490	25.4	11.8	3.1	chr6	42879266	42879448	(127926531)	C	MIR	SINE/MIR	(0)	262	65	3384265
2442	5.0	2.3	0.0	chr6	43022099	43022397	(127783582)	C	AluY	SINE/Alu	(5)	306	1	3384540
15	18.1	3.1	0.0	chr6	43247644	43247675	(127558304)	+	(GT)n	Simple_repeat	1	33	(0)	3385001
51	0.0	0.0	0.0	chr6	43270415	43270458	(127535521)	+	(GT)n	Simple_repeat	1	44	(0)	3385038
12	18.8	2.6	2.6	chr6	43575960	43575997	(127229982)	+	(GCGGCGG)n	Simple_repeat	1	39	(0)	3385604
19	16.6	4.3	0.0	chr6	43576024	43576070	(127229909)	+	(GCCCGC)n	Simple_repeat	1	49	(0)	3385605
2320	5.0	0.3	7.2	chr6	43576874	43577194	(127228785)	+	AluSx	SINE/Alu	1	299	(13)	3385606
564	22.6	3.4	6.7	chr6	43702343	43702522	(127103457)	+	MER5B	DNA/hAT-Charlie	5	178	(0)	3385854
47	4.2	0.0	0.0	chr6	43702713	43702761	(127103218)	+	(TG)n	Simple_repeat	1	49	(0)	3385855
22	14.9	0.0	0.0	chr6	43769692	43769738	(127036241)	+	(GT)n	Simple_repeat	1	47	(0)	3385987
13	16.1	0.0	9.8	chr6	44062836	44062886	(126743093)	+	(CCCTCTG)n	Simple_repeat	1	51	(0)	3386498
12	16.4	5.9	0.0	chr6	44246276	44246309	(126559670)	+	(CATCC)n	Simple_repeat	1	36	(0)	3386851
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
13	10.5	12.2	0.0	chr6	44829132	44829172	(125976807)	+	GA-rich	Low_complexity	1	46	(0)	3387814
309	28.1	2.8	1.0	chr6	46641809	46641912	(124164067)	+	Tigger10	DNA/TcMar-Tigger	18	123	(1721)	3390496
658	30.6	8.4	6.5	chr6	46649095	46649479	(124156500)	C	MLT1F2	LTR/ERVL-MaLR	(167)	393	1	3390505
533	28.4	3.2	3.6	chr6	46649593	46649844	(124156135)	+	L1ME4b	LINE/L1	642	892	(0)	3390506
17	8.3	3.9	0.0	chr6	49541596	49541621	(121264358)	+	(GA)n	Simple_repeat	1	27	(0)	3394522
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
12	9.7	8.6	2.6	chr6	53348638	53348672	(117457307)	+	(CGGAG)n	Simple_repeat	1	38	(0)	3400037
14	23.1	2.1	2.1	chr6	53348858	53348904	(117457075)	+	(GGC)n	Simple_repeat	1	48	(0)	3400038
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
4989	21.1	5.0	1.4	chr6	54980605	54981111	(115824868)	C	Tigger17b	DNA/TcMar-Tigger	(549)	524	2	3402356
24	6.8	0.0	0.0	chr6	54981113	54981143	(115824836)	+	(GT)n	Simple_repeat	1	31	(0)	3402358
19	0.0	0.0	0.0	chr6	54981332	54981352	(115824627)	+	(T)n	Simple_repeat	1	21	(0)	3402359
12	23.3	2.5	0.0	chr6	56491899	56491938	(114314041)	+	A-rich	Low_complexity	1	41	(0)	3404230
18	20.9	0.0	0.0	chr6	56514523	56514563	(114291416)	+	(TCTC)n	Simple_repeat	1	41	(0)	3404259
40	0.0	0.0	0.0	chr6	56514579	56514612	(114291367)	+	(AC)n	Simple_repeat	1	34	(0)	3404260
10068	12.8	3.4	1.4	chr6	71027081	71029075	(99776904)	C	L1PBa1	LINE/L1	(4610)	2253	6	3420030
26	19.7	1.7	0.0	chr6	71886865	71886923	(98919056)	+	(GCT)n	Simple_repeat	1	60	(0)	3421176
13	21.2	2.6	0.0	chr6	71887208	71887245	(98918734)	+	(CCAT)n	Simple_repeat	1	39	(0)	3421177
2308	11.1	1.6	0.0	chr6	73703904	73704201	(97101778)	+	AluSx1	SINE/Alu	2	304	(8)	3424098
1962	14.3	4.1	3.1	chr6	77561868	77562227	(93243752)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3428957
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
2038	11.5	12.3	0.0	chr6	83867684	83867996	(86937983)	+	LTR18A	LTR/ERVL	1	357	(0)	3437088
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
350	24.2	0.1	0.0	chr6	85679445	85679519	(85126460)	C	MIRc	SINE/MIR	(53)	155	81	3439431
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
347	27.8	7.3	13.2	chr6	87553222	87553410	(83252569)	+	MLT1H1	LTR/ERVL-MaLR	265	441	(48)	3441737
875	22.5	2.2	9.9	chr6	87553411	87553652	(83252327)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	3441738
347	27.8	7.3	13.2	chr6	87553653	87553682	(83252297)	+	MLT1H1	LTR/ERVL-MaLR	442	470	(19)	3441737
5263	19.0	6.5	4.6	chr6	87792769	87792873	(83013106)	+	Charlie1a	DNA/hAT-Charlie	4	109	(1346)	3442223
2524	10.0	0.0	0.0	chr6	87792874	87793172	(83012807)	C	AluSg	SINE/Alu	(11)	299	1	3442224
5263	19.0	6.5	4.6	chr6	87793173	87794273	(83011706)	+	Charlie1a	DNA/hAT-Charlie	110	1234	(221)	3442223
259	24.2	12.8	0.0	chr6	89638871	89638965	(81167014)	+	MIRb	SINE/MIR	124	232	(36)	3445116
2213	7.7	1.0	1.7	chr6	89820075	89820374	(80985605)	+	AluSz	SINE/Alu	1	298	(14)	3445427
1392	17.9	1.5	2.6	chr6	89820422	89820685	(80985294)	C	MER50	LTR/ERV1	(41)	693	433	3445428
37	2.9	0.0	0.0	chr6	90219780	90219815	(80586164)	+	(AC)n	Simple_repeat	1	36	(0)	3446053
54	0.0	0.0	0.0	chr6	90239799	90239844	(80566135)	+	(AC)n	Simple_repeat	1	46	(0)	3446085
34	0.0	0.0	0.0	chr6	90849533	90849561	(79956418)	+	(TG)n	Simple_repeat	1	29	(0)	3446946
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
17	14.1	5.1	0.0	chr6	98834764	98834802	(71971177)	+	GA-rich	Low_complexity	1	41	(0)	3456775
56	8.4	0.0	0.0	chr6	98835245	98835321	(71970658)	+	(GCAGCA)n	Simple_repeat	1	77	(0)	3456777
14	12.7	0.0	0.0	chr6	98835584	98835609	(71970370)	+	(GCC)n	Simple_repeat	1	26	(0)	3456778
21	22.2	0.0	1.9	chr6	99614278	99614331	(71191648)	+	(CGG)n	Simple_repeat	1	54	(0)	3457943
62	0.0	0.0	0.0	chr6	100107643	100107695	(70698284)	+	(TG)n	Simple_repeat	1	53	(0)	3458584
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
47	2.3	0.0	0.0	chr6	105402419	105402463	(65403516)	+	(CA)n	Simple_repeat	1	45	(0)	3465368
50	0.0	0.0	0.0	chr6	105599953	105599995	(65205984)	+	(TG)n	Simple_repeat	1	43	(0)	3465660
1813	4.7	0.0	0.5	chr6	107027849	107028060	(63777919)	+	AluY	SINE/Alu	1	211	(100)	3468021
31	19.1	4.7	1.1	chr6	107490483	107490568	(63315411)	+	(CCGCCA)n	Simple_repeat	1	90	(0)	3468956
25	31.7	1.0	1.9	chr6	107490569	107490584	(63315395)	+	(CCG)n	Simple_repeat	1	103	(0)	3468957
2155	11.9	0.0	1.0	chr6	107644024	107644325	(63161654)	+	AluSx3	SINE/Alu	5	303	(8)	3469150
14	20.8	4.5	0.0	chr6	107667110	107667153	(63138826)	+	(TCTCTG)n	Simple_repeat	1	46	(0)	3469182
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
13	20.8	0.0	0.0	chr6	108134183	108134215	(62671764)	+	(CCCTCC)n	Simple_repeat	1	33	(0)	3470017
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
1686	18.9	8.6	0.5	chr6	108518997	108519369	(62286610)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	1	3470770
14	28.4	1.8	0.0	chr6	108558401	108558455	(62247524)	+	G-rich	Low_complexity	1	56	(0)	3470834
4428	15.0	6.0	0.9	chr6	108835723	108836196	(61969783)	+	L1MB5	LINE/L1	4900	5397	(749)	3471227
591	24.1	15.3	2.0	chr6	108897154	108897356	(61908623)	+	MER46C	DNA/TcMar-Tigger	104	338	(0)	3471327
321	31.8	16.1	2.9	chr6	108897478	108897820	(61908159)	+	Tigger19b	DNA/TcMar-Tigger	99	495	(55)	3471328
1468	21.5	7.4	4.7	chr6	109687333	109687853	(61118126)	+	MLT1E1A	LTR/ERVL-MaLR	41	677	(3)	3472528
1467	19.0	3.4	5.6	chr6	110039486	110039842	(60766137)	C	MLT1B	LTR/ERVL-MaLR	(38)	352	4	3473070
13	7.4	0.0	8.8	chr6	110040045	110040078	(60765901)	+	A-rich	Low_complexity	1	34	(0)	3473071
1407	22.3	5.0	8.9	chr6	110040149	110040480	(60765499)	C	MER84	LTR/ERV1	(2)	505	171	3473072
3875	13.7	5.5	4.2	chr6	110493401	110493641	(60312338)	+	MER50B	LTR/ERV1	1	234	(463)	3473739
2249	9.3	0.3	3.5	chr6	110493642	110493951	(60312028)	+	AluSp	SINE/Alu	1	300	(13)	3473740
2499	6.5	0.0	0.3	chr6	110981555	110981863	(59824116)	C	AluSx1	SINE/Alu	(4)	308	1	3474772
1817	13.7	5.2	0.7	chr6	111011277	111011588	(59794391)	C	AluSz	SINE/Alu	(0)	312	1	3474852
266	13.3	6.2	0.0	chr6	111417174	111417218	(59388761)	C	LTR33B	LTR/ERVL	(455)	48	1	3475558
19	23.4	0.0	0.0	chr6	111482928	111482977	(59323002)	+	(CGGCAG)n	Simple_repeat	1	50	(0)	3475665
68	0.0	0.0	0.0	chr6	111568433	111568490	(59237489)	+	(GT)n	Simple_repeat	1	58	(0)	3475844
488	11.9	1.5	0.0	chr6	111568636	111568702	(59237277)	+	AluSz	SINE/Alu	1	68	(244)	3475845
13	15.7	9.3	0.0	chr6	111568709	111568751	(59237228)	+	(ATCCATG)n	Simple_repeat	1	47	(0)	3475846
281	31.2	4.7	1.4	chr6	112217017	112217159	(58588820)	C	MIRb	SINE/MIR	(17)	251	104	3476784
299	37.5	2.2	3.1	chr6	112217364	112217591	(58588388)	C	Plat_L3	LINE/CR1	(55)	3531	3306	3476785
336	29.1	9.1	7.5	chr6	112228449	112228782	(58577197)	C	LTR33	LTR/ERVL	(6)	509	170	3476805
15	17.7	2.6	0.0	chr6	112253756	112253793	(58552186)	+	(TCAACTT)n	Simple_repeat	1	39	(0)	3476841
1002	28.8	4.9	3.0	chr6	116072371	116072530	(54733449)	+	MLT1I	LTR/ERVL-MaLR	1	165	(246)	3482090
41	0.0	0.0	0.0	chr6	116072531	116072565	(54733414)	+	(AC)n	Simple_repeat	1	35	(0)	3482091
1002	28.8	4.9	3.0	chr6	116072566	116072805	(54733174)	+	MLT1I	LTR/ERVL-MaLR	166	409	(2)	3482090
1634	17.0	12.7	8.9	chr6	116280941	116281424	(54524555)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3482347
32	26.9	0.0	3.7	chr6	116616035	116616141	(54189838)	+	(TCCC)n	Simple_repeat	1	107	(0)	3482821
17	8.2	3.9	0.0	chr6	116616124	116616149	(54189830)	+	(CA)n	Simple_repeat	1	27	(0)	3482822
37	0.0	0.0	0.0	chr6	116681112	116681145	(54124834)	+	(CCG)n	Simple_repeat	1	34	(0)	3482935
2114	4.8	0.7	17.6	chr6	116681988	116682344	(54123635)	+	AluY	SINE/Alu	4	299	(12)	3482937
480	25.9	3.5	5.8	chr6	117531829	117532033	(53273946)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	286	3484016
383	21.4	8.0	0.0	chr6	117532080	117532182	(53273797)	C	MLT1H2	LTR/ERVL-MaLR	(377)	112	1	3484016
308	29.5	15.3	1.8	chr6	117906575	117906743	(52899236)	C	MIRb	SINE/MIR	(68)	200	5	3484465
3451	18.4	3.3	3.3	chr6	123489393	123490202	(47315777)	+	Looper	DNA/PiggyBac	3	812	(745)	3491749
222	36.8	3.2	4.7	chr6	123841457	123841647	(46964332)	+	MamRTE1	LINE/RTE-BovB	1830	2017	(1795)	3492237
22	14.6	2.0	4.0	chr6	124823367	124823415	(45982564)	+	(AC)n	Simple_repeat	1	50	(0)	3493449
1763	19.4	9.7	1.6	chr6	124949751	124950175	(45855804)	+	MLT1C	LTR/ERVL-MaLR	5	467	(0)	3493619
825	30.1	5.8	7.0	chr6	125013121	125013345	(45792634)	C	L2a	LINE/L2	(29)	3397	3179	3493716
46	2.3	0.0	0.0	chr6	125013346	125013389	(45792590)	+	(TG)n	Simple_repeat	1	44	(0)	3493717
825	30.1	5.8	7.0	chr6	125013390	125013549	(45792430)	C	L2a	LINE/L2	(248)	3178	3017	3493716
10578	11.3	1.8	1.7	chr6	125123598	125125671	(45680308)	+	L1PBa1	LINE/L1	255	2336	(4527)	3493885
194	29.4	9.0	1.9	chr6	125259456	125259570	(45546409)	C	L3b	LINE/CR1	(843)	3256	3160	3494084
211	40.0	3.3	4.9	chr6	125812598	125813065	(44992914)	+	L2	LINE/L2	2324	2783	(636)	3494856
13	13.2	6.7	4.2	chr6	125956943	125956987	(44848992)	+	(GAGGCGC)n	Simple_repeat	1	48	(0)	3495078
3639	8.2	2.0	4.9	chr6	125994602	125995155	(44810824)	+	L1PA11	LINE/L1	5637	6174	(0)	3495130
15	8.8	0.0	0.0	chr6	127515788	127515811	(43290168)	+	(GCC)n	Simple_repeat	1	24	(0)	3496998
15	8.7	0.0	0.0	chr6	130019427	130019451	(40786528)	+	(GAGC)n	Simple_repeat	1	25	(0)	3500311
16	14.5	0.0	0.0	chr6	130019614	130019644	(40786335)	+	(CACA)n	Simple_repeat	1	31	(0)	3500312
18	11.6	0.0	4.9	chr6	130019645	130019652	(40786327)	+	(CGCACA)n	Simple_repeat	3	41	(0)	3500313
12	20.7	0.0	2.9	chr6	132401389	132401423	(38404556)	+	(AGC)n	Simple_repeat	1	35	(0)	3503794
2137	7.0	0.4	0.4	chr6	132813784	132814042	(37991937)	+	AluSq2	SINE/Alu	1	259	(54)	3504375
18	0.0	0.0	0.0	chr6	132973595	132973614	(37832365)	+	(AG)n	Simple_repeat	1	20	(0)	3504627
2481	29.0	11.8	9.7	chr6	133609583	133610595	(37195384)	+	L2a	LINE/L2	1397	2472	(954)	3505468
30	0.0	0.0	0.0	chr6	133952134	133952162	(36853817)	+	(GGCGT)n	Simple_repeat	1	29	(0)	3505928
605	32.3	7.8	1.9	chr6	136403294	136403510	(34402469)	C	MIR	SINE/MIR	(23)	245	7	3509828
2572	20.2	9.1	0.7	chr6	137665033	137665644	(33140335)	C	LTR65	LTR/ERV1	(0)	669	1	3511791
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
13	22.8	5.9	0.0	chr6	138773803	138773853	(32032126)	+	(GGCTGT)n	Simple_repeat	1	54	(0)	3513523
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
31	0.0	0.0	0.0	chr6	139152419	139152445	(31653534)	+	(TG)n	Simple_repeat	1	27	(0)	3514207
1220	21.9	0.6	2.6	chr6	139194914	139195225	(31610754)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	216	3514269
684	19.6	7.6	1.8	chr6	139195241	139195463	(31610516)	+	Charlie17	DNA/hAT-Charlie	2676	2912	(4)	3514270
37	17.4	1.5	0.0	chr6	139292048	139292115	(31513864)	+	(AC)n	Simple_repeat	1	69	(0)	3514417
12	20.0	0.0	0.0	chr6	139373808	139373836	(31432143)	+	(TGC)n	Simple_repeat	1	29	(0)	3514555
30	6.0	0.0	0.0	chr6	142944420	142944454	(27861525)	+	(CA)n	Simple_repeat	1	35	(0)	3519174
13	21.6	0.0	0.0	chr6	142944530	142944561	(27861418)	+	GA-rich	Low_complexity	1	32	(0)	3519175
41	2.6	0.0	0.0	chr6	143061109	143061148	(27744831)	+	(TG)n	Simple_repeat	1	40	(0)	3519337
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
255	31.2	4.3	1.8	chr6	143513337	143513450	(27292529)	+	L2c	LINE/L2	3262	3378	(9)	3519993
1635	14.8	7.8	0.4	chr6	143513743	143514013	(27291966)	C	AluSx1	SINE/Alu	(17)	295	3	3519994
17	15.8	5.9	1.9	chr6	144064364	144064414	(26741565)	+	(GCCCCCGC)n	Simple_repeat	1	54	(0)	3520784
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
1929	10.9	4.6	4.3	chr6	145964598	145964900	(24841079)	+	AluSx	SINE/Alu	1	304	(8)	3523418
187	19.4	0.0	0.0	chr6	147201993	147202028	(23603951)	+	MER5A	DNA/hAT-Charlie	136	171	(18)	3525089
278	32.8	15.6	3.2	chr6	147202044	147202289	(23603690)	+	L2c	LINE/L2	3068	3349	(38)	3525087
437	20.2	0.0	0.0	chr6	147642362	147642440	(23163539)	+	MIR3	SINE/MIR	109	187	(21)	3525686
227	28.0	0.0	0.0	chr6	147642608	147642657	(23163322)	C	MIR3	SINE/MIR	(41)	167	118	3525687
245	33.1	3.6	3.0	chr6	148109757	148109921	(22696058)	C	LTR81B	LTR/Gypsy	(194)	1199	1034	3526331
12	31.5	2.1	6.3	chr6	148109958	148110050	(22695929)	+	(CTTC)n	Simple_repeat	1	95	(0)	3526332
2015	32.2	7.8	2.5	chr6	148736323	148737608	(22068371)	+	L2a	LINE/L2	2059	3426	(0)	3527368
14	8.0	3.5	3.3	chr6	148747761	148747789	(22058190)	+	(CGC)n	Simple_repeat	1	30	(0)	3527385
54	7.0	0.0	0.0	chr6	149249117	149249191	(21556788)	+	(CACACA)n	Simple_repeat	1	75	(0)	3528116
2351	9.8	0.3	0.3	chr6	149563015	149563320	(21242659)	+	AluSq2	SINE/Alu	1	306	(7)	3528675
1735	15.7	1.1	2.1	chr6	149563321	149563606	(21242373)	+	AluJo	SINE/Alu	12	294	(18)	3528676
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
17	31.7	2.0	4.0	chr6	149749714	149749812	(21056167)	+	(GCGGCG)n	Simple_repeat	1	101	(0)	3529085
65	0.0	0.0	0.0	chr6	149847825	149847879	(20958100)	+	(AC)n	Simple_repeat	1	55	(0)	3529293
1443	22.5	5.2	2.3	chr6	149848046	149848168	(20957811)	+	MLT1A0	LTR/ERVL-MaLR	1	139	(226)	3529294
4288	12.0	0.7	6.7	chr6	149848169	149848900	(20957079)	+	L1PREC2	LINE/L1	5469	6156	(4)	3529295
1655	23.5	3.0	0.7	chr6	149933919	149934347	(20871632)	C	MER119	DNA/hAT-Charlie	(38)	545	107	3529410
85	32.2	0.0	0.7	chr6	149934838	149935112	(20870867)	+	(GT)n	Simple_repeat	1	275	(0)	3529411
19	21.4	0.0	0.0	chr6	150069234	150069278	(20736701)	+	(GCCCC)n	Simple_repeat	1	45	(0)	3529610
1996	12.6	6.0	3.2	chr6	150129551	150129878	(20676101)	C	THE1D	LTR/ERVL-MaLR	(34)	347	1	3529721
2285	10.5	0.0	0.0	chr6	150317991	150318284	(20487695)	C	AluSc	SINE/Alu	(15)	294	1	3530026
2645	10.7	0.3	0.0	chr6	150419521	150419883	(20386096)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3530185
35	5.8	0.0	5.0	chr6	150673586	150673645	(20132334)	+	(TCCT)n	Simple_repeat	1	60	(0)	3530571
1738	16.9	0.0	1.4	chr6	150673683	150673960	(20132019)	C	AluJb	SINE/Alu	(34)	278	5	3530572
6075	14.6	2.1	0.4	chr6	150879967	150881378	(19924601)	C	L1MA6	LINE/L1	(2)	6298	4858	3530911
13361	15.6	3.2	2.3	chr6	154566731	154568095	(16237884)	+	ERVL-B4-int	LTR/ERVL	4337	5714	(0)	3536624
418	19.1	2.3	0.0	chr6	154568097	154568180	(16237799)	+	MLT2B4	LTR/ERVL	2	87	(469)	3536624
13	18.2	3.5	6.8	chr6	154733522	154733578	(16072401)	+	G-rich	Low_complexity	1	59	(0)	3536959
247	23.3	1.6	0.0	chr6	155013694	155013753	(15792226)	+	Tigger19a	DNA/TcMar-Tigger	261	321	(2)	3537475
263	31.8	3.5	3.5	chr6	156710351	156710464	(14095515)	C	UCON55	DNA/TcMar-Tigger	(52)	140	27	3539864
1368	15.9	4.2	2.6	chr6	156710527	156710676	(14095303)	+	Tigger3	DNA/TcMar-Tigger	1	154	(2875)	3539865
31	0.0	0.0	0.0	chr6	156710677	156710703	(14095276)	+	(GT)n	Simple_repeat	1	27	(0)	3539866
1368	15.9	4.2	2.6	chr6	156710704	156710784	(14095195)	+	Tigger3	DNA/TcMar-Tigger	155	235	(2794)	3539865
1291	28.9	7.1	7.6	chr6	156710786	156711216	(14094763)	+	L1MEd	LINE/L1	1206	1610	(5476)	3539862
45	14.1	0.0	1.2	chr6	156778169	156778248	(14027731)	+	(CCA)n	Simple_repeat	1	80	(0)	3539995
49	3.9	0.0	0.0	chr6	156778269	156778321	(14027658)	+	(CAG)n	Simple_repeat	1	53	(0)	3539996
16	14.9	0.0	0.0	chr6	156778732	156778761	(14027218)	+	(CCG)n	Simple_repeat	1	30	(0)	3539998
69	37.0	0.4	0.0	chr6	157221601	157221868	(13584111)	+	(CA)n	Simple_repeat	1	269	(0)	3540567
17	8.0	0.0	0.0	chr6	157240914	157240940	(13565039)	+	(GGGA)n	Simple_repeat	1	27	(0)	3540589
254	27.5	10.3	2.4	chr6	158026040	158026177	(12779802)	+	MIRc	SINE/MIR	19	150	(118)	3541843
390	27.4	9.3	0.0	chr6	158026287	158026432	(12779547)	+	MIR	SINE/MIR	24	184	(78)	3541844
51	29.6	4.2	1.8	chr6	158040160	158040374	(12765605)	+	(TG)n	Simple_repeat	1	224	(0)	3541856
1127	5.2	0.0	0.7	chr6	158168816	158168951	(12637028)	+	AluSx	SINE/Alu	1	135	(177)	3542063
2230	9.8	0.0	0.0	chr6	158168952	158169236	(12636743)	+	AluSx1	SINE/Alu	1	285	(27)	3542064
1322	26.1	9.6	4.8	chr6	159074185	159074647	(11731332)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	23	3543620
2482	13.1	2.4	0.8	chr6	160520332	160520822	(10285157)	C	LTR12E	LTR/ERV1	(823)	499	1	3545512
25	24.0	1.0	6.0	chr6	160991941	160991956	(9814023)	+	(GCC)n	Simple_repeat	1	25	(75)	3546055
12	18.8	2.6	2.6	chr6	160991957	160991994	(9813985)	+	(TCCCGCC)n	Simple_repeat	1	39	(0)	3546056
25	24.0	1.0	6.0	chr6	160991995	160992039	(9813940)	+	(GCC)n	Simple_repeat	26	100	(0)	3546055
322	32.7	3.3	7.2	chr6	165674100	165674320	(5131659)	+	MIR	SINE/MIR	32	243	(19)	3552237
14	4.9	0.0	0.0	chr6	165674870	165674890	(5131089)	+	(GTT)n	Simple_repeat	1	21	(0)	3552238
244	18.9	0.8	0.0	chr6	165734971	165735440	(5070539)	+	(TAGG)n	Simple_repeat	1	474	(0)	3552315
1418	19.5	5.6	6.4	chr6	165735445	165735863	(5070116)	C	MLT2B4	LTR/ERVL	(34)	683	163	3552314
67	38.9	3.9	0.5	chr6	165749154	165749534	(5056445)	+	(CTATCA)n	Simple_repeat	1	396	(0)	3552336
330	23.4	1.3	0.8	chr6	167515870	167516644	(3289335)	+	(CATCAT)n	Simple_repeat	1	785	(0)	3554507
19	18.6	0.0	6.5	chr6	168106449	168106511	(2699468)	+	G-rich	Low_complexity	1	58	(0)	3555142
185	30.3	0.9	12.1	chr6	168106668	168106791	(2699188)	+	X6B_LINE	LINE/CR1	844	953	(119)	3555143
181	28.9	1.3	0.6	chr6	168119568	168120101	(2685878)	+	(ATC)n	Simple_repeat	1	541	(0)	3555158
285	29.5	1.7	1.8	chr6	169923530	169924449	(881530)	+	(TCATCA)n	Simple_repeat	1	936	(0)	3556980
477	28.8	6.4	5.1	chr7	125527	125742	(159220231)	C	L1ME3A	LINE/L1	(0)	6173	5955	3557987
2627	5.2	0.0	0.3	chr7	125988	126295	(159219678)	C	AluY	SINE/Alu	(4)	307	1	3557988
27	23.6	5.3	2.5	chr7	149147	149260	(159196713)	+	(GCCTGC)n	Simple_repeat	1	120	(0)	3558013
210	31.5	6.4	0.0	chr7	191569	191641	(159154332)	C	Tigger19a	DNA/TcMar-Tigger	(105)	218	141	3558058
253	24.2	1.9	0.8	chr7	566138	566780	(158779193)	+	(CACCAT)n	Simple_repeat	1	655	(0)	3558519
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
17	13.3	0.0	11.3	chr7	975609	975670	(158370303)	+	(GCCCC)n	Simple_repeat	1	62	(0)	3559144
343	22.9	7.9	0.9	chr7	2564876	2564981	(156780992)	+	MLT1C	LTR/ERVL-MaLR	340	453	(14)	3561651
46	11.2	0.0	1.2	chr7	2565081	2565160	(156780813)	+	(TG)n	Simple_repeat	1	80	(0)	3561652
33	22.7	1.2	1.2	chr7	2565201	2565280	(156780693)	+	(TG)n	Simple_repeat	1	81	(0)	3561652
272	29.9	0.6	0.1	chr7	3270356	3270899	(156075074)	+	(TGA)n	Simple_repeat	1	546	(0)	3563025
309	38.5	0.0	0.0	chr7	4416582	4416711	(154929262)	C	L3	LINE/CR1	(4)	4095	3966	3564770
1187	27.5	6.7	1.2	chr7	4416797	4417286	(154928687)	+	L2	LINE/L2	1907	2425	(994)	3564771
98	27.6	1.6	2.3	chr7	4905226	4905529	(154440444)	+	GA-rich	Low_complexity	1	309	(0)	3565751
230	33.6	15.0	3.8	chr7	5513927	5514323	(153831650)	+	L2a	LINE/L2	2921	3426	(0)	3567205
2307	6.3	1.7	0.3	chr7	5563836	5564122	(153781851)	C	AluSp	SINE/Alu	(21)	292	2	3567346
2159	7.2	1.8	0.4	chr7	6448232	6448507	(152897466)	C	AluSz	SINE/Alu	(32)	280	1	3569392
844	16.4	0.6	10.9	chr7	6448511	6448693	(152897280)	C	AluJr	SINE/Alu	(15)	297	134	3569393
33	0.0	0.0	0.0	chr7	13920442	13920469	(145425504)	+	(GT)n	Simple_repeat	1	28	(0)	3579355
13	11.0	0.0	6.1	chr7	19707336	19707368	(139638605)	+	A-rich	Low_complexity	1	33	(0)	3586800
12	20.1	2.9	0.0	chr7	23182167	23182200	(136163773)	+	(GCA)n	Simple_repeat	1	35	(0)	3591849
47	0.0	0.0	0.0	chr7	25856999	25857038	(133488935)	+	(AC)n	Simple_repeat	1	40	(0)	3596026
14	9.1	0.0	0.0	chr7	25857039	25857062	(133488911)	+	(GCAC)n	Simple_repeat	1	24	(0)	3596027
262	30.2	8.2	6.5	chr7	26418028	26418243	(132927730)	+	LTR85b	LTR/Gypsy?	12	235	(588)	3597019
966	25.7	5.5	4.9	chr7	26418332	26418617	(132927356)	+	LTR85b	LTR/Gypsy?	497	784	(0)	3597019
21	6.1	2.9	0.0	chr7	26535241	26535274	(132810699)	+	(AAAAC)n	Simple_repeat	1	35	(0)	3597203
274	25.9	7.0	7.0	chr7	26574920	26575077	(132770896)	+	L1ME4c	LINE/L1	415	572	(258)	3597263
34	0.0	0.0	0.0	chr7	26864056	26864084	(132481889)	+	(CA)n	Simple_repeat	1	29	(0)	3597641
15	21.2	0.0	0.0	chr7	27113640	27113677	(132232296)	+	(GCTCAG)n	Simple_repeat	1	38	(0)	3598031
53	0.0	0.0	0.0	chr7	27372850	27372894	(131973079)	+	(AC)n	Simple_repeat	1	45	(0)	3598389
338	34.2	7.7	1.1	chr7	27409691	27409873	(131936100)	+	MIRc	SINE/MIR	53	248	(20)	3598454
16	27.4	2.1	0.0	chr7	27662892	27662939	(131683034)	+	(GC)n	Simple_repeat	1	49	(0)	3598812
840	26.1	19.3	2.4	chr7	28002706	28003125	(131342848)	+	MLT1J	LTR/ERVL-MaLR	1	508	(4)	3599345
19	22.5	2.4	6.0	chr7	29989645	29989726	(129356247)	+	G-rich	Low_complexity	1	84	(0)	3602440
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
12	24.0	0.0	0.0	chr7	38631597	38631631	(120714342)	+	A-rich	Low_complexity	1	35	(0)	3615416
13	7.5	7.1	0.0	chr7	38909068	38909095	(120436878)	+	(CTCCA)n	Simple_repeat	1	30	(0)	3615797
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
224	27.2	3.4	1.7	chr7	43198011	43198815	(116147158)	+	(AC)n	Simple_repeat	1	832	(0)	3622266
25	21.9	3.7	7.2	chr7	43869162	43869295	(115476678)	+	(CCCCAGC)n	Simple_repeat	1	139	(0)	3623321
13	14.2	0.0	5.7	chr7	43869590	43869624	(115476349)	+	(GGCGG)n	Simple_repeat	1	35	(0)	3623322
1936	9.4	5.9	1.1	chr7	44582848	44583123	(114762850)	+	AluJb	SINE/Alu	1	290	(22)	3624449
12	21.9	3.9	3.8	chr7	44796964	44797014	(114548959)	+	(GCG)n	Simple_repeat	1	53	(0)	3624883
43	0.0	0.0	0.0	chr7	55887601	55887639	(103458334)	+	(GCG)n	Simple_repeat	1	39	(0)	3639433
986	7.7	14.4	0.6	chr7	65503501	65505975	(93839998)	+	(TTCAT)n	Simple_repeat	1	2832	(0)	3647924
2614	13.9	6.4	0.0	chr7	65837761	65838171	(93507802)	+	MER1A	DNA/hAT-Charlie	1	439	(90)	3648586
13	23.1	3.7	8.9	chr7	66205649	66205756	(93140217)	+	(CCCCGG)n	Simple_repeat	1	112	(0)	3649522
43	31.3	2.8	5.0	chr7	66920826	66921080	(92424893)	+	(CA)n	Simple_repeat	1	262	(0)	3651108
25	30.6	2.5	2.4	chr7	69599418	69599473	(89746500)	+	(CTCCCCT)n	Simple_repeat	1	84	(39)	3657064
41	2.5	0.0	0.0	chr7	69600409	69600448	(89745525)	+	(GT)n	Simple_repeat	1	40	(0)	3657068
18	4.8	0.0	0.0	chr7	69600536	69600557	(89745416)	+	(T)n	Simple_repeat	1	22	(0)	3657069
21	16.8	3.0	5.8	chr7	73557632	73557698	(85788275)	+	(CGC)n	Simple_repeat	1	69	(0)	3664904
2157	10.4	3.7	0.3	chr7	73828579	73828866	(85517107)	C	AluSg	SINE/Alu	(12)	298	1	3665579
954	18.8	0.0	0.7	chr7	73828873	73829026	(85516947)	C	AluJr	SINE/Alu	(11)	301	149	3665580
23	14.7	5.3	5.1	chr7	75073665	75073739	(84272234)	+	(GCCCCA)n	Simple_repeat	1	79	(0)	3668725
36	0.0	0.0	0.0	chr7	75639563	75639593	(83706380)	+	(GT)n	Simple_repeat	1	31	(0)	3670121
276	23.1	5.3	1.3	chr7	75915461	75915577	(83430396)	+	MIR1_Amn	SINE/MIR	22	149	(59)	3670901
13	17.6	0.0	2.9	chr7	76358681	76358714	(82987259)	+	GA-rich	Low_complexity	1	34	(0)	3671938
23	27.0	3.6	0.0	chr7	76358916	76359003	(82986970)	+	(GCGGCT)n	Simple_repeat	1	91	(0)	3671939
13	25.0	2.0	2.0	chr7	76397687	76397735	(82948238)	+	(CCCGCAG)n	Simple_repeat	1	50	(0)	3672048
27704	2.5	0.0	0.0	chr7	76728486	76734513	(82611460)	+	L1PA3	LINE/L1	126	6155	(0)	3672679
12	21.8	0.0	4.9	chr7	77696651	77696691	(81649282)	+	(GCA)n	Simple_repeat	1	41	(0)	3674318
18	13.5	0.0	0.0	chr7	79453600	79453632	(79892341)	+	(GGC)n	Simple_repeat	1	33	(0)	3676790
30	3.5	0.0	0.0	chr7	79453794	79453823	(79892150)	+	(GT)n	Simple_repeat	1	30	(0)	3676791
13	15.4	2.5	4.9	chr7	87152981	87153020	(72192953)	+	(TTTTTAG)n	Simple_repeat	1	41	(0)	3686860
48	0.0	0.0	0.0	chr7	87628585	87628625	(71717348)	+	(GT)n	Simple_repeat	1	41	(0)	3687477
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
114	21.5	4.7	0.9	chr7	92423632	92423948	(66922025)	+	(TG)n	Simple_repeat	1	332	(0)	3693856
26	22.3	3.5	2.2	chr7	92447832	92447918	(66898055)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	3693909
535	23.3	9.3	6.8	chr7	95867286	95867514	(63478459)	C	MIRb	SINE/MIR	(22)	246	1	3698581
51	5.4	0.0	0.0	chr7	97006052	97006110	(62339863)	+	(GCA)n	Simple_repeat	1	59	(0)	3700154
25	3.1	0.0	0.0	chr7	97006111	97006143	(62339830)	+	(CGC)n	Simple_repeat	1	33	(0)	3700155
16	4.3	0.0	3.9	chr7	97006204	97006229	(62339744)	+	(CGG)n	Simple_repeat	1	26	(0)	3700156
31	3.1	0.0	0.0	chr7	97006233	97006265	(62339708)	+	(CAC)n	Simple_repeat	1	33	(0)	3700157
14	8.5	0.0	3.7	chr7	98106950	98106976	(61238997)	+	(GGC)n	Simple_repeat	1	27	(0)	3701943
20	20.6	2.0	0.0	chr7	98107089	98107138	(61238835)	+	(CGGA)n	Simple_repeat	1	51	(0)	3701944
13	21.7	0.0	2.6	chr7	98878848	98878886	(60467087)	+	(GCGCTCG)n	Simple_repeat	1	39	(0)	3703633
2173	11.3	0.0	0.0	chr7	99330306	99330614	(60015359)	C	AluSx1	SINE/Alu	(3)	309	1	3704496
2308	7.8	0.3	0.0	chr7	99375782	99376077	(59969896)	+	AluSz	SINE/Alu	2	298	(14)	3704603
1336	16.9	5.3	2.4	chr7	99376078	99376225	(59969748)	+	AluSz	SINE/Alu	137	299	(13)	3704602
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
287	18.0	0.0	0.0	chr7	100013042	100013091	(59332882)	+	L1M5	LINE/L1	5626	5675	(449)	3705682
2224	11.1	1.0	0.3	chr7	100013095	100013392	(59332581)	+	AluSz6	SINE/Alu	1	300	(12)	3705683
516	12.1	0.0	0.0	chr7	100013395	100013460	(59332513)	+	AluSz	SINE/Alu	1	66	(246)	3705684
2371	6.0	1.0	0.7	chr7	100082302	100082600	(59263373)	+	AluSx1	SINE/Alu	1	300	(12)	3705822
3539	11.0	2.2	3.4	chr7	100082616	100083179	(59262794)	+	LTR43	LTR/ERV1	2	558	(44)	3705823
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
22	19.5	0.0	3.5	chr7	100100466	100100522	(59245451)	+	(CCCCCG)n	Simple_repeat	1	57	(0)	3705858
2426	6.9	0.0	0.0	chr7	100125905	100126195	(59219778)	+	AluY	SINE/Alu	1	291	(20)	3705909
2355	8.1	0.0	2.6	chr7	100126196	100126359	(59219614)	+	AluSx1	SINE/Alu	144	300	(12)	3705908
33	14.5	0.0	0.0	chr7	100167981	100168005	(59177968)	+	(GAGA)n	Simple_repeat	1	25	(0)	3706002
31	0.0	0.0	0.0	chr7	100168006	100168032	(59177941)	+	(AC)n	Simple_repeat	1	27	(0)	3706003
33	14.5	0.0	0.0	chr7	100168033	100168068	(59177905)	+	(GAGA)n	Simple_repeat	2	37	(0)	3706004
2506	5.1	0.7	0.0	chr7	100436848	100437140	(58908833)	C	AluSg	SINE/Alu	(15)	295	1	3706571
2212	13.2	0.0	0.3	chr7	100440644	100440946	(58905027)	+	AluSz6	SINE/Alu	5	306	(6)	3706583
2006	11.8	0.0	1.0	chr7	100440948	100441235	(58904738)	+	AluJr	SINE/Alu	1	285	(27)	3706584
16	32.5	2.3	2.2	chr7	100539380	100539466	(58806507)	+	(GGC)n	Simple_repeat	1	89	(0)	3706844
1895	10.3	1.9	0.4	chr7	100611281	100611542	(58734431)	+	AluJo	SINE/Alu	34	299	(13)	3706948
2482	8.0	0.0	0.3	chr7	100611543	100611853	(58734120)	+	AluSx	SINE/Alu	1	310	(2)	3706949
125	28.4	0.6	0.3	chr7	100650179	100650537	(58695436)	+	(CACA)n	Simple_repeat	1	360	(0)	3707049
926	12.4	0.0	1.6	chr7	100650555	100650683	(58695290)	+	FLAM_C	SINE/Alu	1	127	(16)	3707050
217	19.3	13.6	0.0	chr7	100837604	100837660	(58508313)	C	L2a	LINE/L2	(50)	3376	3311	3707491
20	21.4	2.8	4.1	chr7	101085609	101085679	(58260294)	+	G-rich	Low_complexity	1	73	(0)	3707964
2071	11.7	0.3	1.7	chr7	101153657	101153955	(58192018)	+	AluJr	SINE/Alu	2	296	(16)	3708120
283	36.0	10.8	3.6	chr7	101192339	101192560	(58153413)	C	L2c	LINE/L2	(163)	3224	2985	3708211
2484	6.3	0.0	1.6	chr7	101192792	101193107	(58152866)	+	AluY	SINE/Alu	1	311	(0)	3708212
190	33.3	0.0	0.0	chr7	101217552	101217611	(58128362)	C	MIR3	SINE/MIR	(49)	159	100	3708258
51	36.2	1.3	1.3	chr7	101534388	101534708	(57811265)	+	(AC)n	Simple_repeat	1	321	(0)	3709070
346	28.2	17.6	0.0	chr7	101534775	101534961	(57811012)	+	MIRc	SINE/MIR	39	267	(1)	3709071
36	2.7	0.0	0.0	chr7	101743688	101743725	(57602248)	+	(CCT)n	Simple_repeat	1	38	(0)	3709558
404	24.6	11.0	2.1	chr7	102572183	102572323	(56773650)	+	MIRb	SINE/MIR	19	173	(95)	3711319
19732	10.2	2.4	1.4	chr7	102974409	102977040	(56368933)	+	HERVH48-int	LTR/ERV1	485	3158	(3496)	3712026
12	24.3	4.0	1.9	chr7	103297462	103297511	(56048462)	+	(GGC)n	Simple_repeat	1	52	(0)	3712509
1814	22.6	6.6	7.1	chr7	104923032	104923580	(54422393)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	3714823
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
2019	11.9	0.0	0.3	chr7	105401388	105401673	(53944300)	C	AluSz	SINE/Alu	(0)	312	28	3715736
602	24.1	17.6	10.9	chr7	105401674	105402123	(53943850)	+	LTR50	LTR/ERVL	89	684	(111)	3715735
227	27.8	2.0	3.0	chr7	105830241	105830340	(53515633)	+	Charlie15a	DNA/hAT-Charlie	109	207	(17)	3716655
484	27.9	15.5	1.6	chr7	106177036	106177224	(53168749)	C	MIRb	SINE/MIR	(10)	258	39	3717231
553	15.7	4.2	0.0	chr7	106598920	106599041	(52746932)	C	MLT1J	LTR/ERVL-MaLR	(407)	155	20	3717814
19	19.4	3.4	3.3	chr7	107044605	107044665	(52301308)	+	G-rich	Low_complexity	1	61	(0)	3718509
361	30.1	10.4	1.2	chr7	111198293	111198480	(48147493)	+	MIRb	SINE/MIR	5	222	(46)	3724004
235	38.4	6.8	6.8	chr7	111198556	111198851	(48147122)	+	L2b	LINE/L2	2973	3268	(107)	3724005
389	28.8	10.1	1.7	chr7	112793777	112793949	(46552024)	C	MIR	SINE/MIR	(50)	212	24	3726306
49	0.0	0.0	0.0	chr7	112794115	112794156	(46551817)	+	(GT)n	Simple_repeat	1	42	(0)	3726307
196	21.6	0.0	10.5	chr7	112794157	112794213	(46551760)	C	MER5B	DNA/hAT-Charlie	(126)	52	2	3726308
739	17.5	0.0	0.8	chr7	112794235	112794361	(46551612)	+	MER5A	DNA/hAT-Charlie	1	126	(63)	3726309
14	21.1	0.0	0.0	chr7	113085944	113085977	(46259996)	+	G-rich	Low_complexity	1	34	(0)	3726682
58	4.9	0.0	0.0	chr7	113086162	113086224	(46259749)	+	(AC)n	Simple_repeat	1	63	(0)	3726683
53	7.5	0.0	0.0	chr7	113086375	113086444	(46259529)	+	(T)n	Simple_repeat	1	70	(0)	3726684
300	27.5	7.8	5.5	chr7	113421621	113421820	(45924153)	C	MamGypLTR2b	LTR/Gypsy	(134)	788	584	3727105
17	19.7	2.1	2.0	chr7	114086036	114086083	(45259890)	+	(CAACAA)n	Simple_repeat	1	49	(0)	3727930
46	4.3	0.0	0.0	chr7	114086235	114086282	(45259691)	+	(CA)n	Simple_repeat	1	48	(0)	3727931
20	7.8	0.0	0.0	chr7	114414866	114414892	(44931081)	+	(TC)n	Simple_repeat	1	27	(0)	3728377
37	9.9	0.0	0.0	chr7	114414893	114414946	(44931027)	+	(CA)n	Simple_repeat	1	54	(0)	3728378
2838	18.9	1.6	0.6	chr7	116097241	116097784	(43248189)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	3730583
515	31.3	10.9	0.0	chr7	116512615	116512777	(42833196)	C	MIR	SINE/MIR	(69)	193	11	3731148
1993	17.9	4.1	3.1	chr7	116546805	116547258	(42798715)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	1	3731194
14	22.7	4.5	4.3	chr7	116672312	116672378	(42673595)	+	(GGCG)n	Simple_repeat	1	70	(0)	3731400
16	4.5	0.0	0.0	chr7	116862569	116862591	(42483382)	+	(GCC)n	Simple_repeat	1	23	(0)	3731665
1871	13.8	3.0	5.6	chr7	118109716	118110053	(41235920)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	20	3733459
22	3.9	0.0	0.0	chr7	120950749	120950775	(38395198)	+	(T)n	Simple_repeat	1	27	(0)	3737033
189	35.6	0.0	0.0	chr7	121314646	121314690	(38031283)	C	L2b	LINE/L2	(21)	3354	3310	3737509
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
2107	11.0	0.6	0.0	chr7	121438422	121438749	(37907224)	C	L1P1	LINE/L1	(5468)	687	358	3737681
9705	5.0	0.8	0.0	chr7	121438750	121440798	(37905175)	+	L1PA5	LINE/L1	4089	6150	(4)	3737682
29	16.1	0.0	0.0	chr7	121873273	121873328	(37472645)	+	(CTCTCT)n	Simple_repeat	1	56	(0)	3738330
30	3.4	0.0	0.0	chr7	121873329	121873358	(37472615)	+	(CA)n	Simple_repeat	1	30	(0)	3738331
13	21.5	7.3	2.7	chr7	121873738	121873805	(37472168)	+	(CGCGCCC)n	Simple_repeat	1	73	(0)	3738332
11	27.2	2.0	2.0	chr7	122304531	122304548	(37041425)	+	(CACCAC)n	Simple_repeat	1	28	(23)	3738935
16	0.0	0.0	0.0	chr7	122304549	122304568	(37041405)	+	(CCT)n	Simple_repeat	1	20	(0)	3738936
11	27.2	2.0	2.0	chr7	122304569	122304580	(37041393)	+	(CACCAC)n	Simple_repeat	29	51	(0)	3738935
1579	23.7	2.0	3.9	chr7	123643366	123643830	(35702143)	+	L1MB8	LINE/L1	5709	6164	(14)	3740739
373	34.1	9.1	0.6	chr7	127578465	127578644	(31767329)	+	MIRb	SINE/MIR	3	199	(69)	3745947
57	0.0	0.0	0.0	chr7	127635292	127635340	(31710633)	+	(TG)n	Simple_repeat	1	49	(0)	3746024
419	10.0	1.6	0.0	chr7	128344082	128344141	(31001832)	+	U7	snRNA	2	62	(1)	3747039
15	0.0	0.0	0.0	chr7	128360988	128361004	(30984969)	+	(CA)n	Simple_repeat	1	17	(0)	3747073
25	3.4	0.0	0.0	chr7	128361074	128361103	(30984870)	+	(CT)n	Simple_repeat	1	30	(0)	3747074
43	0.0	0.0	0.0	chr7	128361104	128361140	(30984833)	+	(CA)n	Simple_repeat	1	37	(0)	3747075
31	31.6	2.4	0.8	chr7	128361162	128361284	(30984689)	+	(CA)n	Simple_repeat	1	126	(0)	3747075
336	24.0	21.7	0.6	chr7	128362081	128362249	(30983724)	C	MIRc	SINE/MIR	(34)	234	15	3747077
33	25.2	5.8	1.4	chr7	128405902	128406040	(30939933)	+	(CGCGGC)n	Simple_repeat	1	147	(0)	3747156
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
573	23.1	0.7	0.9	chr7	128887355	128888702	(30457271)	+	(CA)n	Simple_repeat	1	1358	(0)	3748101
490	23.4	6.0	3.7	chr7	129271709	129271872	(30074101)	+	L1MEi	LINE/L1	1976	2143	(69)	3748859
1387	23.6	9.7	11.7	chr7	129271924	129272451	(30073522)	+	MLT1G	LTR/ERVL-MaLR	79	594	(1)	3748860
12	22.1	0.0	0.0	chr7	129434515	129434546	(29911427)	+	(AACGGC)n	Simple_repeat	1	32	(0)	3749137
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
3008	1.3	0.0	0.0	chr7	130577480	130577797	(28768176)	+	AluYb8	SINE/Alu	1	318	(0)	3751320
26549	2.2	0.1	0.2	chr7	130577798	130583509	(28762464)	+	L1PA2	LINE/L1	448	6155	(0)	3751319
1853	15.6	0.0	3.8	chr7	131325409	131325723	(28020250)	+	AluJb	SINE/Alu	1	303	(9)	3752607
230	31.1	5.2	10.0	chr7	131325724	131325907	(28020066)	C	L2a	LINE/L2	(260)	3127	2933	3752606
361	30.7	16.0	0.6	chr7	131859490	131859653	(27486320)	+	MIR3	SINE/MIR	15	208	(0)	3753581
12	19.6	2.9	0.0	chr7	133253193	133253227	(26092746)	+	(GGAGGCA)n	Simple_repeat	1	36	(0)	3755685
400	38.6	9.4	0.5	chr7	133491915	133492310	(25853663)	C	L2c	LINE/L2	(408)	3011	2577	3756016
13	23.2	4.3	0.0	chr7	133492463	133492508	(25853465)	+	(TCTAA)n	Simple_repeat	1	48	(0)	3756019
361	30.7	8.8	11.0	chr7	133934968	133935487	(25410486)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	1	3756702
25	17.4	9.5	0.0	chr7	133977651	133977734	(25368239)	+	(TTTGG)n	Simple_repeat	1	92	(0)	3756756
34	0.0	0.0	0.0	chr7	133977739	133977767	(25368206)	+	(TG)n	Simple_repeat	1	29	(0)	3756757
260	30.6	0.0	3.0	chr7	133977771	133977871	(25368102)	C	Charlie15a	DNA/hAT-Charlie	(17)	207	110	3756758
1172	21.9	4.4	4.2	chr7	133977911	133978324	(25367649)	+	MER57B2	LTR/ERV1	3	510	(0)	3756759
13	25.5	0.0	9.5	chr7	134127159	134127242	(25218731)	+	A-rich	Low_complexity	1	84	(0)	3757000
14	26.9	3.0	2.9	chr7	135211522	135211587	(24134386)	+	G-rich	Low_complexity	1	68	(0)	3758573
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
2343	8.8	0.3	0.0	chr7	139339886	139340182	(20005791)	C	AluSp	SINE/Alu	(15)	298	1	3765382
630	2.8	0.0	0.0	chr7	139340700	139340771	(20005202)	+	tRNA-Arg-AGG	tRNA	1	72	(4)	3765383
1955	15.4	0.0	2.6	chr7	140396019	140396323	(18949650)	C	AluJr	SINE/Alu	(15)	297	1	3767333
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
14	20.9	4.8	4.6	chr7	140626604	140626665	(18719308)	+	(TCCT)n	Simple_repeat	1	65	(0)	3767905
50	23.2	0.0	0.0	chr7	140640090	140640196	(18705777)	+	(CA)n	Simple_repeat	1	107	(0)	3767936
192	32.3	0.3	0.5	chr7	140654604	140655184	(18690789)	+	(CCA)n	Simple_repeat	1	583	(0)	3767973
4192	12.0	6.9	1.2	chr7	140672105	140672755	(18673218)	C	LTR8	LTR/ERV1	(0)	691	1	3767990
306	20.5	6.0	0.2	chr7	140674881	140674959	(18671014)	C	MLT1J1	LTR/ERVL-MaLR	(12)	432	347	3767993
2168	12.4	1.0	0.0	chr7	140674961	140675266	(18670707)	+	AluSz	SINE/Alu	1	309	(3)	3767994
704	15.3	0.0	5.3	chr7	140675305	140675435	(18670538)	C	FLAM_C	SINE/Alu	(10)	133	10	3767995
792	30.9	1.4	13.3	chr7	140949476	140949642	(18396331)	+	L2	LINE/L2	2475	2617	(802)	3768483
19	4.3	0.0	0.0	chr7	141071482	141071505	(18274468)	+	(GA)n	Simple_repeat	1	24	(0)	3768721
420	30.6	0.0	4.0	chr7	141738729	141738854	(17607119)	C	L2a	LINE/L2	(16)	3410	3290	3769758
13	27.1	1.2	7.3	chr7	143362459	143362539	(15983434)	+	G-rich	Low_complexity	1	82	(0)	3771808
18	24.7	1.5	4.3	chr7	148699038	148699105	(10646868)	+	(CGG)n	Simple_repeat	1	69	(0)	3779245
40	9.0	0.0	1.6	chr7	148921305	148921365	(10424608)	+	(CA)n	Simple_repeat	1	61	(0)	3779608
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
15	0.0	0.0	0.0	chr7	149239672	149239690	(10106283)	+	(CGG)n	Simple_repeat	1	19	(0)	3780360
2329	9.0	0.0	0.3	chr7	149461623	149461922	(9884051)	+	AluSc	SINE/Alu	1	299	(10)	3780736
658	1.4	0.0	0.0	chr7	149635687	149635758	(9710215)	+	tRNA-Cys-TGY	tRNA	1	72	(3)	3780964
2299	10.0	0.3	0.3	chr7	149646645	149646943	(9699030)	+	AluSx	SINE/Alu	1	299	(13)	3780982
630	5.5	0.0	0.0	chr7	149646954	149647026	(9698947)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	3780983
226	24.4	9.5	2.3	chr7	149873136	149873223	(9472750)	C	MIRb	SINE/MIR	(44)	224	130	3781257
12	20.0	5.3	5.0	chr7	149873609	149873665	(9472308)	+	(CGGCG)n	Simple_repeat	1	60	(0)	3781258
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
4381	10.9	3.0	0.7	chr7	150322212	150322830	(9023143)	+	MER41B	LTR/ERV1	1	634	(0)	3781881
1001	12.7	22.9	1.8	chr7	150378556	150378784	(8967189)	+	AluJo	SINE/Alu	1	292	(20)	3781972
471	30.7	4.7	1.6	chr7	150898872	150899119	(8446854)	C	MLT1J	LTR/ERVL-MaLR	(112)	400	145	3782618
13	8.7	4.0	0.0	chr7	150992687	150992711	(8353262)	+	(TGTC)n	Simple_repeat	1	26	(0)	3782757
12	21.2	7.1	1.7	chr7	151080620	151080675	(8265298)	+	(GCCGCT)n	Simple_repeat	1	60	(0)	3782871
22	27.1	4.6	5.1	chr7	151168621	151168771	(8177202)	+	(TTCCTC)n	Simple_repeat	1	158	(0)	3782991
19	29.0	0.0	3.9	chr7	151251913	151251989	(8093984)	+	(GGCCC)n	Simple_repeat	1	77	(0)	3783106
12	20.4	8.6	1.6	chr7	151252224	151252281	(8093692)	+	GA-rich	Low_complexity	1	63	(0)	3783107
457	27.1	1.6	0.8	chr7	151312638	151313973	(8032000)	+	(GT)n	Simple_repeat	1	1358	(0)	3783229
182	34.6	15.8	1.8	chr7	152675349	152675457	(6670516)	+	L2c	LINE/L2	3245	3371	(16)	3785718
414	28.4	3.4	1.4	chr7	154817198	154817340	(4528633)	+	MER117	DNA/hAT-Charlie	1	146	(51)	3788775
16	26.6	1.7	1.6	chr7	155297434	155297493	(4048480)	+	G-rich	Low_complexity	1	61	(0)	3789476
57	12.4	3.1	0.0	chr7	155509462	155509558	(3836415)	+	GA-rich	Low_complexity	1	100	(0)	3789721
15	24.6	2.0	2.0	chr7	155644567	155644616	(3701357)	+	(CGG)n	Simple_repeat	1	51	(0)	3789931
225	21.2	6.9	2.5	chr7	156237372	156238187	(3107786)	+	(TG)n	Simple_repeat	1	872	(0)	3790663
1827	18.8	10.8	5.6	chr7	157136266	157136921	(2209052)	+	L1MA9	LINE/L1	5310	6082	(230)	3791929
498	21.9	1.6	0.8	chr7	157880962	157881085	(1464888)	+	MLT1B	LTR/ERVL-MaLR	7	131	(259)	3792817
1157	21.8	3.9	0.3	chr7	157881247	157881540	(1464433)	+	MLT1B	LTR/ERVL-MaLR	70	374	(16)	3792818
1267	24.7	5.5	5.1	chr7	157931936	157932449	(1413524)	C	L1MC4	LINE/L1	(3)	8039	7536	3792861
236	36.4	0.4	0.5	chr7	158594002	158594717	(751256)	+	(GGTGGT)n	Simple_repeat	1	717	(0)	3793406
941	24.6	13.1	3.3	chr8	6452517	6452852	(138685784)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3802095
312	29.6	6.6	1.4	chr8	6452923	6453066	(138685570)	C	L2a	LINE/L2	(993)	2426	2275	3802088
1910	16.1	7.8	0.7	chr8	6648595	6648969	(138489667)	C	LTR10A	LTR/ERV1	(64)	545	173	3802383
258	18.9	11.9	3.9	chr8	6648995	6649071	(138489565)	C	LTR10A	LTR/ERV1	(354)	255	172	3802384
29	3.0	7.9	4.9	chr8	6649072	6649147	(138489489)	+	(TGACTAAGGA)n	Simple_repeat	1	82	(0)	3802385
270	13.6	0.0	0.0	chr8	6649167	6649210	(138489426)	C	LTR10A	LTR/ERV1	(353)	256	213	3802386
308	16.1	0.0	20.2	chr8	6649215	6649323	(138489313)	C	LTR10A	LTR/ERV1	(353)	256	170	3802386
380	21.3	5.0	0.0	chr8	6649330	6649423	(138489213)	C	LTR10A	LTR/ERV1	(353)	256	158	3802386
379	36.3	5.1	0.6	chr8	8407566	8407734	(136730902)	C	MIRb	SINE/MIR	(58)	210	34	3804657
1140	24.7	8.1	17.7	chr8	8575432	8576041	(136562595)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	3804954
192	30.5	2.4	4.7	chr8	10653296	10653381	(134485255)	C	MIR3	SINE/MIR	(24)	184	101	3808424
34	3.0	0.0	0.0	chr8	10653460	10653493	(134485143)	+	(AC)n	Simple_repeat	1	34	(0)	3808425
45	34.7	0.0	2.3	chr8	10653510	10653682	(134484954)	+	(AC)n	Simple_repeat	1	173	(0)	3808425
13	25.3	2.0	2.0	chr8	11808347	11808395	(133330241)	+	G-rich	Low_complexity	1	50	(0)	3810190
43	2.3	0.0	0.0	chr8	11808705	11808748	(133329888)	+	(CCCACT)n	Simple_repeat	1	44	(0)	3810191
742	30.3	11.8	5.0	chr8	12776033	12777569	(132361067)	+	L1M6	LINE/L1	729	2383	(4113)	3811548
574	19.1	6.0	0.9	chr8	12777713	12777823	(132360813)	+	Tigger5b	DNA/TcMar-Tigger	1	117	(355)	3811549
39	6.7	0.0	0.0	chr8	16826065	16826111	(128312525)	+	(AC)n	Simple_repeat	1	47	(0)	3817319
13	15.8	2.7	2.6	chr8	17246506	17246542	(127892094)	+	(CCCCCAG)n	Simple_repeat	1	38	(0)	3817917
14	0.0	0.0	0.0	chr8	17246694	17246711	(127891925)	+	(CTC)n	Simple_repeat	1	18	(0)	3817918
27	6.1	0.0	0.0	chr8	17246733	17246767	(127891869)	+	(GGCGGT)n	Simple_repeat	1	35	(0)	3817919
18	14.0	2.4	2.4	chr8	17413210	17413250	(127725386)	+	(CCT)n	Simple_repeat	1	42	(0)	3818144
2370	9.0	0.3	0.0	chr8	17515294	17515592	(127623044)	C	AluSc5	SINE/Alu	(9)	300	1	3818311
21	14.6	0.0	0.0	chr8	19817439	19817476	(125321160)	+	(GCG)n	Simple_repeat	1	38	(0)	3821835
2116	10.8	0.3	6.6	chr8	22433528	22433860	(122704776)	C	AluJb	SINE/Alu	(0)	312	1	3826217
922	16.2	0.0	0.0	chr8	22433864	22434005	(122704631)	C	AluSx3	SINE/Alu	(6)	305	164	3826218
413	26.6	4.4	3.9	chr8	22434013	22434192	(122704444)	C	L1ME4a	LINE/L1	(186)	5938	5758	3826219
14	30.4	0.0	1.7	chr8	23000159	23000216	(122138420)	+	(CGCCCCG)n	Simple_repeat	1	58	(0)	3827192
2411	4.9	0.0	1.1	chr8	23163090	23163402	(121975234)	C	AluSq2	SINE/Alu	(0)	313	1	3827473
28	0.0	0.0	0.0	chr8	23163417	23163443	(121975193)	+	(GAAC)n	Simple_repeat	1	27	(0)	3827474
11	24.9	0.0	2.5	chr8	23246999	23247038	(121891598)	+	(GGCGCG)n	Simple_repeat	1	40	(0)	3827599
183	29.4	5.2	1.1	chr8	23247039	23247131	(121891505)	+	L2b	LINE/L2	3263	3359	(16)	3827600
12	26.3	0.0	5.5	chr8	24956547	24956601	(120182035)	+	GA-rich	Low_complexity	1	55	(0)	3830234
21060	7.2	1.1	0.0	chr8	25609372	25615474	(119523162)	C	L1PA5	LINE/L1	(1)	6153	4	3831385
2790	17.2	2.9	0.9	chr8	26437995	26438540	(118700096)	+	L1MB3	LINE/L1	5624	6180	(3)	3832741
638	27.6	6.9	4.7	chr8	26438541	26438654	(118699982)	+	MIR	SINE/MIR	142	262	(0)	3832740
2189	12.1	0.3	0.0	chr8	26572502	26572798	(118565838)	C	AluSx1	SINE/Alu	(14)	298	1	3832981
21	37.7	0.6	4.6	chr8	26635682	26635855	(118502781)	+	(TTCT)n	Simple_repeat	1	175	(0)	3833085
6442	12.9	3.8	1.0	chr8	27394289	27395390	(117743246)	C	Tigger3b	DNA/TcMar-Tigger	(82)	1149	16	3834313
237	30.3	4.3	0.0	chr8	27395402	27395490	(117743146)	+	L2c	LINE/L2	3242	3334	(53)	3834314
273	21.6	3.5	4.3	chr8	27395491	27395606	(117743030)	+	LTR16C	LTR/ERVL	1	115	(374)	3834315
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
502	25.0	3.5	1.4	chr8	27772777	27772918	(117365718)	+	MIR	SINE/MIR	88	232	(30)	3834959
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
1962	21.3	7.8	4.8	chr8	28402907	28403149	(116735487)	+	L1ME1	LINE/L1	5604	5868	(311)	3836062
16	28.6	1.7	0.0	chr8	28890493	28890551	(116248085)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3837025
15	25.1	0.0	5.3	chr8	29350150	29350206	(115788430)	+	(GCC)n	Simple_repeat	1	57	(0)	3837754
2197	11.2	6.6	3.7	chr8	29647627	29647979	(115490657)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3838282
1907	13.0	0.7	4.4	chr8	30658532	30658846	(114479790)	C	AluSz	SINE/Alu	(9)	303	1	3840125
33	17.1	0.0	0.0	chr8	33599116	33599177	(111539459)	+	(CACCAT)n	Simple_repeat	1	62	(0)	3844860
27	27.0	0.0	0.0	chr8	33599178	33599185	(111539451)	+	(CAT)n	Simple_repeat	1	70	(0)	3844861
2185	13.4	2.0	9.8	chr8	36573737	36574124	(108564512)	C	LTR18A	LTR/ERVL	(0)	357	1	3849085
548	19.6	0.0	0.0	chr8	36574192	36574293	(108564343)	C	HERVL18-int	LTR/ERVL	(0)	6047	5946	3849085
450	24.1	4.2	3.5	chr8	37216059	37216200	(107922436)	C	MER103C	DNA/hAT-Charlie	(134)	163	21	3850000
2023	17.5	0.0	2.8	chr8	37216335	37216692	(107921944)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	3850001
1931	24.9	9.1	0.4	chr8	37320986	37321496	(107817140)	+	MLT1F1	LTR/ERVL-MaLR	10	569	(0)	3850139
204	21.6	3.0	0.4	chr8	37355810	37356274	(107782362)	+	(ATGG)n	Simple_repeat	1	479	(0)	3850185
539	28.9	9.3	1.5	chr8	37388649	37388845	(107749791)	+	MIRb	SINE/MIR	9	222	(46)	3850238
530	32.9	9.3	0.0	chr8	37388888	37389121	(107749515)	+	MIR	SINE/MIR	4	261	(1)	3850239
537	34.5	2.0	5.3	chr8	37450501	37450913	(107687723)	C	LTR16E2	LTR/ERVL	(45)	523	125	3850341
17	18.9	0.0	0.0	chr8	37450983	37451018	(107687618)	+	(GCA)n	Simple_repeat	1	36	(0)	3850342
16	17.5	0.0	0.0	chr8	37452631	37452663	(107685973)	+	GA-rich	Low_complexity	1	33	(0)	3850344
41	2.6	0.0	0.0	chr8	37472147	37472186	(107666450)	+	(AC)n	Simple_repeat	1	40	(0)	3850363
18	7.6	0.0	0.0	chr8	37472198	37472230	(107666406)	+	(CAAAA)n	Simple_repeat	1	33	(0)	3850364
2350	10.2	0.0	0.0	chr8	37595273	37595565	(107543071)	+	AluSq2	SINE/Alu	2	294	(19)	3850594
549	28.6	7.3	4.0	chr8	37603832	37604066	(107534570)	C	MIRb	SINE/MIR	(11)	257	2	3850613
635	25.8	11.7	0.0	chr8	37604435	37604616	(107534020)	+	MIR	SINE/MIR	16	221	(41)	3850614
3610	14.7	2.4	0.8	chr8	37617268	37617486	(107521150)	+	L1MA4	LINE/L1	5668	5884	(416)	3850640
2251	11.6	0.3	0.0	chr8	37617487	37617789	(107520847)	+	AluSz	SINE/Alu	7	310	(2)	3850641
3610	14.7	2.4	0.8	chr8	37617790	37618188	(107520448)	+	L1MA4	LINE/L1	5885	6296	(4)	3850640
387	34.0	6.7	2.0	chr8	37638929	37639152	(107499484)	+	MIRb	SINE/MIR	7	239	(23)	3850683
458	23.5	9.5	3.6	chr8	37649959	37650126	(107488510)	C	UCON18	Unknown	(40)	515	337	3850708
17	19.9	4.3	0.0	chr8	37675862	37675908	(107462728)	+	(CTCT)n	Simple_repeat	1	49	(0)	3850761
1980	19.1	4.7	2.8	chr8	38602831	38603288	(106535348)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3852612
2462	9.3	0.0	0.0	chr8	38714090	38714400	(106424236)	+	AluSc8	SINE/Alu	1	311	(0)	3852809
209	25.8	15.1	0.0	chr8	38714604	38714665	(106423971)	+	MIRc	SINE/MIR	55	127	(141)	3852810
355	28.8	3.7	0.6	chr8	38768661	38770089	(106368547)	+	(GT)n	Simple_repeat	1	1473	(0)	3852935
462	25.7	11.5	5.1	chr8	38924383	38924746	(106213890)	C	LTR16A2	LTR/ERVL	(52)	443	3	3853211
21	16.2	0.0	4.4	chr8	38996919	38996963	(106141673)	+	(CG)n	Simple_repeat	1	45	(0)	3853349
13	19.8	0.0	6.5	chr8	41828226	41828271	(103310365)	+	(CCCCG)n	Simple_repeat	1	46	(0)	3857668
882	30.5	8.2	1.5	chr8	42145867	42146233	(102992403)	C	L2a	LINE/L2	(527)	2892	2497	3858220
2149	14.3	2.1	3.7	chr8	42209089	42209538	(102929098)	+	L1PB4	LINE/L1	5522	5968	(163)	3858343
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
1583	14.6	3.9	1.4	chr8	43093803	43094077	(102044559)	+	AluJb	SINE/Alu	1	282	(30)	3860104
12	20.7	2.0	5.9	chr8	47188672	47188721	(97949915)	+	(CACCCAG)n	Simple_repeat	1	51	(0)	3861571
11	21.3	4.4	2.1	chr8	47188861	47188905	(97949731)	+	(CCGCCA)n	Simple_repeat	1	47	(0)	3861572
11	29.7	1.8	1.8	chr8	47960107	47960161	(97178475)	+	(CCCGCT)n	Simple_repeat	1	56	(0)	3862668
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
1776	9.4	2.0	0.0	chr8	60516181	60516425	(84622211)	C	AluSx	SINE/Alu	(2)	310	61	3879291
984	21.5	4.1	8.2	chr8	60763100	60763403	(84375233)	C	MER33	DNA/hAT-Charlie	(29)	295	5	3879709
13	29.6	1.5	3.0	chr8	63038959	63039023	(82099613)	+	(GCCCGC)n	Simple_repeat	1	66	(0)	3882621
17	18.6	0.0	0.0	chr8	63038992	63039028	(82099608)	+	(CCCCGA)n	Simple_repeat	1	37	(0)	3882622
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
12	5.6	0.0	0.0	chr8	63168758	63168776	(81969860)	+	(CGG)n	Simple_repeat	1	19	(0)	3882839
14	5.0	0.0	0.0	chr8	63168838	63168858	(81969778)	+	(GGC)n	Simple_repeat	1	21	(0)	3882840
29	0.0	0.0	0.0	chr8	67343821	67343847	(77794789)	+	(GCG)n	Simple_repeat	1	27	(0)	3889097
775	23.5	6.0	0.0	chr8	69720803	69720989	(75417647)	C	MER58A	DNA/hAT-Charlie	(0)	224	26	3892461
619	22.0	20.7	1.5	chr8	69721012	69721354	(75417282)	+	MLT1J	LTR/ERVL-MaLR	75	487	(25)	3892462
28	0.0	0.0	0.0	chr8	73009049	73009074	(72129562)	+	(GAG)n	Simple_repeat	1	26	(0)	3897250
299	30.6	14.4	1.9	chr8	73009320	73009499	(72129137)	+	MIRb	SINE/MIR	15	228	(40)	3897251
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
12	20.2	0.0	6.7	chr8	78665979	78666023	(66472613)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	3904970
19	25.2	1.2	5.9	chr8	80487371	80487475	(64651161)	+	(GGC)n	Simple_repeat	1	100	(0)	3907904
2931	33.1	6.8	3.4	chr8	91026905	91028303	(54110333)	+	ERVL-E-int	LTR/ERVL	239	1688	(3979)	3921954
14	18.4	2.0	6.0	chr8	94823415	94823463	(50315173)	+	(GCG)n	Simple_repeat	1	50	(0)	3927665
14	19.2	9.3	0.0	chr8	98045591	98045644	(47092992)	+	(GCGGAA)n	Simple_repeat	1	59	(0)	3932978
1707	13.3	1.3	7.8	chr8	98045693	98046014	(47092622)	+	AluJb	SINE/Alu	1	301	(11)	3932979
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
12	0.0	0.0	5.0	chr8	102412758	102412777	(42725859)	+	(GGA)n	Simple_repeat	1	20	(0)	3940263
687	24.6	4.9	5.3	chr8	104325503	104325549	(40813087)	+	MIR	SINE/MIR	224	262	(0)	3943519
227	35.2	8.6	3.0	chr8	108042831	108042994	(37095642)	+	MIRb	SINE/MIR	38	211	(57)	3948786
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
279	33.6	2.8	1.4	chr8	116765683	116765821	(28372815)	C	MIR3	SINE/MIR	(31)	177	37	3960554
189	30.9	11.8	1.0	chr8	116765956	116766053	(28372583)	+	MIRc	SINE/MIR	9	118	(150)	3960555
6878	13.6	6.2	1.1	chr8	117901998	117902566	(27236070)	C	Tigger3b	DNA/TcMar-Tigger	(627)	604	30	3962335
2276	13.7	0.3	0.0	chr8	118078192	118078497	(27060139)	C	AluSz	SINE/Alu	(5)	307	1	3962667
11	24.5	4.9	3.1	chr8	119856107	119856167	(25282469)	+	(GATCCCC)n	Simple_repeat	1	64	(0)	3965498
279	29.9	11.2	2.8	chr8	119856225	119856403	(25282233)	C	MIRb	SINE/MIR	(35)	233	38	3965499
202	29.6	12.1	2.6	chr8	120124051	120124206	(25014430)	C	OldhAT1	DNA/hAT-Ac	(2362)	486	314	3966124
20	17.9	1.9	1.9	chr8	123241150	123241201	(21897435)	+	G-rich	Low_complexity	1	53	(0)	3971459
303	35.4	5.3	0.0	chr8	124539424	124539621	(20599015)	+	MIRb	SINE/MIR	48	256	(12)	3973889
233	27.8	2.7	1.6	chr8	142012502	142013288	(3125348)	+	(CCATCA)n	Simple_repeat	1	808	(0)	4004413
55	25.7	5.7	3.4	chr8	142448938	142449218	(2689418)	+	(CCAT)n	Simple_repeat	1	297	(0)	4004912
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
263	28.1	0.4	0.3	chr8	143410314	143410698	(1727938)	+	(GTG)n	Simple_repeat	1	387	(0)	4006180
28	8.1	0.0	0.0	chr8	143410699	143410738	(1727898)	+	(TGG)n	Simple_repeat	1	40	(0)	4006181
12	27.2	2.0	2.0	chr8	143541484	143541533	(1597103)	+	(GCGGA)n	Simple_repeat	1	51	(0)	4006298
33	0.0	0.0	0.0	chr8	143952182	143952209	(1186427)	+	(AC)n	Simple_repeat	1	28	(0)	4006869
13	20.3	0.0	0.0	chr8	143952210	143952239	(1186397)	+	(GCAC)n	Simple_repeat	1	30	(0)	4006870
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
314	32.0	10.5	0.2	chr8	144457247	144457439	(681197)	+	MIR	SINE/MIR	28	253	(15)	4007640
17	21.1	1.9	3.7	chr8	144522867	144522919	(615717)	+	(CGG)n	Simple_repeat	1	54	(0)	4007704
25346	7.5	0.5	0.1	chr8	145013842	145019963	(118673)	C	L1PA5	LINE/L1	(6)	6148	3	4008434
10847	4.9	0.0	0.0	chr8	145019967	145021243	(117393)	+	HERVK14C-int	LTR/ERVK	2835	4111	(3323)	4008435
20	16.7	2.5	0.0	chr9	2017375	2017414	(136377303)	+	(GT)n	Simple_repeat	1	41	(0)	4011562
20	18.9	2.4	0.0	chr9	2017521	2017562	(136377155)	+	(GT)n	Simple_repeat	1	43	(0)	4011563
18	23.9	1.9	0.0	chr9	2017563	2017574	(136377143)	+	(GTGTGC)n	Simple_repeat	1	55	(0)	4011564
14	24.2	0.0	0.0	chr9	2017664	2017702	(136377015)	+	G-rich	Low_complexity	1	39	(0)	4011565
26197	4.5	0.2	0.1	chr9	17263045	17269181	(121125536)	C	L1PA4	LINE/L1	(3)	6152	7	4033111
211	15.3	0.0	0.0	chr9	18976929	18976967	(119417750)	+	MIRb	SINE/MIR	195	237	(31)	4035338
1746	14.7	3.3	0.8	chr9	20658950	20659215	(117735502)	+	AluSx3	SINE/Alu	5	277	(34)	4038204
1133	16.7	1.1	0.0	chr9	20659254	20659461	(117735256)	+	AluSx3	SINE/Alu	129	311	(0)	4038205
1015	20.7	0.0	6.6	chr9	20659477	20659719	(117734998)	+	MLT1B	LTR/ERVL-MaLR	161	387	(3)	4038203
1033	15.4	2.2	6.6	chr9	22138949	22139175	(116255542)	+	MLT1C	LTR/ERVL-MaLR	6	223	(167)	4040186
568	18.0	0.0	0.0	chr9	22139177	22139265	(116255452)	+	AluJb	SINE/Alu	218	306	(6)	4040187
1803	19.6	1.6	0.0	chr9	22139266	22139571	(116255146)	+	AluJo	SINE/Alu	2	312	(0)	4040188
1530	15.1	8.3	0.7	chr9	33290031	33290308	(105104409)	+	AluJr	SINE/Alu	2	302	(10)	4055139
402	30.8	3.6	0.8	chr9	34646257	34646390	(103748327)	+	L2b	LINE/L2	3236	3373	(2)	4057738
47	0.0	0.0	0.0	chr9	35834032	35834071	(102560646)	+	(AC)n	Simple_repeat	1	40	(0)	4059492
255	23.9	13.0	2.2	chr9	35834127	35834304	(102560413)	+	MIR3	SINE/MIR	3	208	(60)	4059493
310	26.0	9.9	5.2	chr9	36802558	36802691	(101592026)	C	L2b	LINE/L2	(27)	3348	3208	4061491
41	0.0	2.6	0.0	chr9	36802749	36802787	(101591930)	+	(TG)n	Simple_repeat	1	40	(0)	4061492
13	9.1	0.0	3.9	chr9	37296676	37296716	(101098001)	+	(TTTA)n	Simple_repeat	1	39	(0)	4062394
1203	19.3	8.0	4.5	chr9	37296727	37296881	(101097836)	C	AluJr	SINE/Alu	(38)	274	124	4062395
55	0.0	0.0	0.0	chr9	37296882	37296928	(101097789)	+	(TG)n	Simple_repeat	1	47	(0)	4062396
1203	19.3	8.0	4.5	chr9	37296929	37297036	(101097681)	C	AluJr	SINE/Alu	(190)	122	1	4062395
17	9.1	2.6	5.0	chr9	37785063	37785101	(100609616)	+	(CCGCTT)n	Simple_repeat	1	40	(0)	4063381
15	13.9	0.0	0.0	chr9	69671841	69671864	(68722853)	+	(AC)n	Simple_repeat	1	24	(0)	4081929
33	29.4	1.7	0.8	chr9	69672235	69672351	(68722366)	+	(CCG)n	Simple_repeat	1	119	(0)	4081930
18	4.7	0.0	0.0	chr9	69760011	69760032	(68634685)	+	(CG)n	Simple_repeat	1	22	(0)	4082050
347	32.2	6.6	4.3	chr9	70601038	70601290	(67793427)	+	MIRc	SINE/MIR	2	260	(8)	4083458
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
12	15.8	0.0	3.3	chr9	75890707	75890736	(62503981)	+	(GAGC)n	Simple_repeat	1	30	(0)	4091628
16	23.3	1.3	7.7	chr9	83622940	83623016	(54771701)	+	G-rich	Low_complexity	1	78	(0)	4103205
180	18.2	0.0	0.0	chr9	83623330	83623362	(54771355)	C	MIR3	SINE/MIR	(60)	148	116	4103206
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
313	32.3	2.0	0.0	chr9	85339169	85339267	(53055450)	C	MamGypLTR1b	LTR/Gypsy	(549)	233	133	4106071
423	25.8	5.2	0.0	chr9	86175165	86175292	(52219425)	C	LTR16C	LTR/ERVL	(8)	481	347	4107440
34	3.0	0.0	0.0	chr9	86731546	86731579	(51663138)	+	(AC)n	Simple_repeat	1	34	(0)	4108367
13	21.6	0.0	0.0	chr9	86945965	86945996	(51448721)	+	(TCG)n	Simple_repeat	1	32	(0)	4108700
15	14.4	0.0	0.0	chr9	91197560	91197583	(47197134)	+	(T)n	Simple_repeat	1	24	(0)	4114858
255	29.7	11.9	1.7	chr9	92670393	92670512	(45724205)	+	MIRc	SINE/MIR	37	170	(92)	4117046
45	2.4	0.0	0.0	chr9	94694371	94694413	(43700304)	+	(TG)n	Simple_repeat	1	43	(0)	4120116
23	3.7	0.0	0.0	chr9	95507906	95507933	(42886784)	+	(AC)n	Simple_repeat	1	28	(0)	4121303
28	24.6	0.0	0.0	chr9	95508033	95508095	(42886622)	+	(GT)n	Simple_repeat	1	63	(0)	4121304
30	26.7	1.9	6.7	chr9	95508226	95508387	(42886330)	+	(CCG)n	Simple_repeat	1	165	(0)	4121305
711	27.3	10.2	0.7	chr9	97411417	97411726	(40982991)	C	L2a	LINE/L2	(8)	3418	3076	4124477
44	2.4	0.0	0.0	chr9	97511071	97511112	(40883605)	+	(CA)n	Simple_repeat	1	42	(0)	4124617
308	28.4	11.8	9.7	chr9	97696884	97697140	(40697577)	C	L1M4b	LINE/L1	(6203)	664	402	4124935
21	33.6	1.3	0.0	chr9	99821957	99822034	(38572683)	+	(CA)n	Simple_repeat	1	79	(0)	4129132
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
12	20.4	5.0	0.0	chr9	124853148	124853187	(13541530)	+	G-rich	Low_complexity	1	42	(0)	4173398
21	13.3	0.0	0.0	chr9	124854514	124854546	(13540171)	+	(AC)n	Simple_repeat	1	33	(0)	4173399
344	9.4	6.6	0.3	chr9	125409649	125410266	(12984451)	+	(CA)n	Simple_repeat	1	659	(0)	4174630
260	20.2	11.6	5.6	chr9	125410342	125410430	(12984287)	+	MLT1K	LTR/ERVL-MaLR	158	252	(343)	4174631
834	22.6	6.4	2.9	chr9	127452581	127452822	(10941895)	C	MIRb	SINE/MIR	(9)	259	9	4178233
18	12.9	2.2	4.3	chr9	128420787	128420832	(9973885)	+	(GCCCCG)n	Simple_repeat	1	47	(0)	4180478
13	27.2	5.6	1.3	chr9	128420833	128420838	(9973879)	+	(GCCCG)n	Simple_repeat	55	76	(0)	4180477
14	16.7	4.8	2.3	chr9	128420884	128420925	(9973792)	+	(GCT)n	Simple_repeat	1	44	(0)	4180479
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
15	17.3	5.2	4.9	chr9	128882181	128882238	(9512479)	+	(CGGC)n	Simple_repeat	1	61	(0)	4181567
12	31.3	0.0	0.0	chr9	129178076	129178119	(9216598)	+	(GCT)n	Simple_repeat	1	44	(0)	4182246
399	31.0	2.3	0.3	chr9	129339514	129340956	(9053761)	+	(GT)n	Simple_repeat	1	1476	(0)	4182600
800	25.2	4.4	1.3	chr9	129395097	129397754	(8996963)	+	(GATG)n	Simple_repeat	1	2776	(0)	4182726
562	33.2	5.0	2.6	chr9	129397780	129398011	(8996706)	+	MIRb	SINE/MIR	31	268	(0)	4182727
401	25.8	1.8	0.5	chr9	129456632	129457679	(8937038)	+	(ATGG)n	Simple_repeat	1	1067	(0)	4182874
1819	10.6	0.4	0.8	chr9	129470312	129470556	(8924161)	+	AluSz	SINE/Alu	39	282	(30)	4182899
27	0.0	0.0	0.0	chr9	129470557	129470582	(8924135)	+	(AAACA)n	Simple_repeat	1	26	(0)	4182900
1885	17.1	2.6	0.3	chr9	129470710	129471013	(8923704)	C	AluJb	SINE/Alu	(1)	311	1	4182901
57	0.0	5.1	0.0	chr9	129607459	129607517	(8787200)	+	(GT)n	Simple_repeat	1	62	(0)	4183238
13	20.6	6.8	3.2	chr9	129803226	129803284	(8591433)	+	(GGC)n	Simple_repeat	1	63	(0)	4183683
16	20.5	3.6	5.2	chr9	129803417	129803472	(8591245)	+	(GC)n	Simple_repeat	1	58	(0)	4183684
2090	10.4	0.4	0.0	chr9	129824318	129824595	(8570122)	+	AluSx1	SINE/Alu	2	280	(32)	4183723
2204	9.9	1.3	2.0	chr9	130196458	130196761	(8197956)	+	AluSx1	SINE/Alu	2	303	(9)	4184528
866	27.2	3.5	0.7	chr9	130196885	130197162	(8197555)	C	L1MC4	LINE/L1	(365)	7677	7392	4184529
613	17.9	0.0	0.9	chr9	130240712	130240818	(8153899)	+	MLT1J	LTR/ERVL-MaLR	70	175	(337)	4184633
350	24.3	10.6	8.2	chr9	130240849	130241032	(8153685)	+	MLT1J	LTR/ERVL-MaLR	321	509	(3)	4184633
582	12.4	7.5	2.5	chr9	130344245	130345650	(8049067)	+	(GT)n	Simple_repeat	1	1512	(0)	4184841
53	15.9	8.3	0.0	chr9	130835649	130835781	(7558936)	+	(TC)n	Simple_repeat	1	144	(0)	4185898
240	36.4	6.0	0.0	chr9	130928783	130928892	(7465825)	+	MIR3	SINE/MIR	60	176	(32)	4186025
12	23.1	2.0	4.0	chr9	130928986	130929034	(7465683)	+	(GGCTGGA)n	Simple_repeat	1	50	(0)	4186026
19	23.7	3.0	6.7	chr9	130929035	130929078	(7465639)	+	G-rich	Low_complexity	15	104	(0)	4186027
1689	25.3	8.4	2.8	chr9	130946634	130947147	(7447570)	C	L1ME2	LINE/L1	(117)	6047	5515	4186063
14	24.0	4.5	2.9	chr9	131096693	131096759	(7297958)	+	G-rich	Low_complexity	1	70	(0)	4186389
12	24.4	0.0	4.3	chr9	131096868	131096914	(7297803)	+	(GCGCCGC)n	Simple_repeat	1	47	(0)	4186390
17	16.3	3.2	6.2	chr9	131097001	131097062	(7297655)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	4186391
1917	11.6	5.2	0.0	chr9	131401964	131402238	(6992479)	C	AluSz	SINE/Alu	(5)	307	18	4187032
1075	17.6	3.9	2.8	chr9	131402273	131402546	(6992171)	C	L1MB3	LINE/L1	(199)	5984	5706	4187029
21	10.5	0.0	0.0	chr9	131762315	131762353	(6632364)	+	(CA)n	Simple_repeat	1	39	(0)	4187647
434	22.6	0.0	6.2	chr9	131762816	131762928	(6631789)	+	MIR	SINE/MIR	60	165	(97)	4187648
22	3.2	0.0	5.6	chr9	132078609	132078644	(6316073)	+	(CCT)n	Simple_repeat	1	36	(0)	4188171
13	21.3	1.6	7.8	chr9	132878302	132878364	(5516353)	+	(CGCCG)n	Simple_repeat	1	64	(0)	4189657
759	12.0	4.0	7.2	chr9	133031186	133031338	(5363379)	C	LTR10B	LTR/ERV1	(0)	547	400	4189956
2040	9.5	1.1	0.7	chr9	133239368	133239650	(5155067)	+	AluSx1	SINE/Alu	28	311	(1)	4190281
184	34.2	16.3	1.7	chr9	133336544	133336778	(5057939)	C	L2a	LINE/L2	(23)	3403	3128	4190431
490	28.8	1.7	0.1	chr9	133382445	133383799	(5010918)	+	(GTG)n	Simple_repeat	1	1378	(0)	4190491
44	4.4	0.0	0.0	chr9	133533151	133533197	(4861520)	+	(GT)n	Simple_repeat	1	47	(0)	4190732
213	31.7	11.5	0.8	chr9	133533255	133533378	(4861339)	+	MIRc	SINE/MIR	31	169	(99)	4190733
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
29	0.0	0.0	0.0	chr9	135967784	135967808	(2426909)	+	(GT)n	Simple_repeat	1	25	(0)	4193861
76	36.3	0.9	2.1	chr9	135967825	135968156	(2426561)	+	(TG)n	Simple_repeat	1	335	(0)	4193862
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
13	12.3	3.8	9.1	chr9	136118938	136118990	(2275727)	+	(GCCTGC)n	Simple_repeat	1	55	(0)	4194048
727	13.5	6.3	2.7	chr9	136307255	136309004	(2085713)	+	(AC)n	Simple_repeat	1	1861	(0)	4194247
246	17.1	4.5	1.8	chr9	136309751	136310333	(2084384)	+	(AC)n	Simple_repeat	1	609	(0)	4194250
12	26.5	3.2	3.1	chr9	136410607	136410668	(1984049)	+	(AGCGGA)n	Simple_repeat	1	64	(0)	4194344
11	21.5	6.0	1.9	chr9	136483793	136483842	(1910875)	+	(GCGGCC)n	Simple_repeat	1	53	(0)	4194420
186	39.1	0.2	0.8	chr9	136630737	136631565	(1763152)	+	(ACAC)n	Simple_repeat	1	831	(0)	4194567
19279	10.8	0.4	1.0	chr9	136783849	136785013	(1609704)	C	HERVK-int	LTR/ERVK	(3826)	3710	2565	4194804
31	12.2	3.8	4.9	chr9	136849629	136849707	(1545010)	+	(GGCGG)n	Simple_repeat	1	82	(0)	4194876
17	22.3	6.0	3.4	chr9	136866032	136866114	(1528603)	+	(CCAGCCC)n	Simple_repeat	1	88	(0)	4194887
14	14.2	0.0	3.0	chr9	136866127	136866159	(1528558)	+	(CCCGG)n	Simple_repeat	1	33	(0)	4194888
22	24.5	1.6	8.0	chr9	136992378	136992500	(1402217)	+	(CCCGC)n	Simple_repeat	1	125	(0)	4195089
26	24.0	1.3	1.3	chr9	137046064	137046138	(1348579)	+	GA-rich	Low_complexity	1	76	(0)	4195148
13	0.0	0.0	0.0	chr9	137241341	137241357	(1153360)	+	(CCG)n	Simple_repeat	1	17	(0)	4195377
2042	9.6	7.6	0.0	chr9	137287312	137287591	(1107126)	C	AluSq	SINE/Alu	(10)	303	1	4195451
918	18.7	11.3	0.0	chr9	137294334	137294568	(1100149)	+	MLT1J	LTR/ERVL-MaLR	42	306	(206)	4195471
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
1676	6.7	0.0	1.8	chrX	2325073	2325234	(153715661)	+	LTR9	LTR/ERV1	66	224	(388)	4362626
364	8.0	0.0	0.0	chrX	2325233	2325282	(153715613)	+	LTR9	LTR/ERV1	174	223	(389)	4362628
416	2.0	0.0	0.0	chrX	2325284	2325332	(153715563)	+	LTR9	LTR/ERV1	176	224	(388)	4362628
422	3.9	0.0	0.0	chrX	2325331	2325381	(153715514)	+	LTR9	LTR/ERV1	174	224	(388)	4362628
2066	18.2	3.4	4.7	chrX	2325380	2325970	(153714925)	+	LTR9	LTR/ERV1	174	728	(0)	4362629
1563	21.1	9.4	1.2	chrX	12307310	12307727	(143733168)	+	L1ME3	LINE/L1	5707	6162	(0)	4379354
13	18.9	0.0	0.0	chrX	12426630	12426659	(143614236)	+	A-rich	Low_complexity	1	30	(0)	4379530
18	16.7	6.1	4.3	chrX	14030226	14030291	(142010604)	+	(CTTT)n	Simple_repeat	1	70	(0)	4382166
4165	7.7	0.5	0.0	chrX	15305763	15306319	(140734576)	C	L1PA12	LINE/L1	(1)	6167	5608	4384147
681	0.0	0.0	0.0	chrX	18674909	18674981	(137365914)	C	tRNA-Val-GTA	tRNA	(3)	73	1	4389954
320	23.9	0.0	7.4	chrX	19127546	19127602	(136913293)	C	L2c	LINE/L2	(31)	3356	3300	4390780
41	19.7	1.1	0.0	chrX	21806732	21806818	(134234077)	+	GA-rich	Low_complexity	1	88	(0)	4394953
490	23.4	8.6	0.0	chrX	21806847	21806974	(134233921)	C	LTR90A	LTR	(78)	898	759	4394954
15	10.6	0.0	5.9	chrX	21839743	21839776	(134201119)	+	(GGT)n	Simple_repeat	1	34	(0)	4395016
14	17.0	6.2	2.0	chrX	24693790	24693837	(131347058)	+	(GCGCG)n	Simple_repeat	1	51	(0)	4400023
48	0.0	0.0	0.0	chrX	40014386	40014426	(116026469)	+	(GT)n	Simple_repeat	1	41	(0)	4421630
16	5.2	0.0	0.0	chrX	40014427	40014446	(116026449)	+	(CG)n	Simple_repeat	1	20	(0)	4421631
1369	28.7	6.6	0.8	chrX	40996809	40997276	(115043619)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	9	4423450
35	26.4	2.8	3.4	chrX	41333339	41333480	(114707415)	+	(CTCCC)n	Simple_repeat	1	146	(0)	4424165
16	18.5	7.0	0.0	chrX	47218695	47218737	(108822158)	+	(CG)n	Simple_repeat	1	46	(0)	4433619
13	7.7	7.1	0.0	chrX	47482595	47482622	(108558273)	+	(GTGC)n	Simple_repeat	1	30	(0)	4434261
16	21.1	4.1	0.0	chrX	47582233	47582281	(108458614)	+	G-rich	Low_complexity	1	51	(0)	4434475
12	20.1	4.1	3.9	chrX	47619918	47619966	(108420929)	+	(CGCGG)n	Simple_repeat	1	51	(0)	4434536
20	12.2	0.0	0.0	chrX	47650519	47650554	(108390341)	+	(GGTGGC)n	Simple_repeat	1	36	(0)	4434593
1539	13.7	1.2	1.1	chrX	48020781	48021052	(108019843)	C	L1MA5	LINE/L1	(1)	6290	6025	4435169
351	33.8	3.3	1.3	chrX	48475691	48475840	(107565055)	C	MIR	SINE/MIR	(69)	193	41	4436153
12	22.5	2.3	2.3	chrX	48696872	48696914	(107343981)	+	(GGCCCCG)n	Simple_repeat	1	44	(0)	4436656
49	0.0	0.0	0.0	chrX	48834780	48834821	(107206074)	+	(CA)n	Simple_repeat	1	42	(0)	4436922
27	3.2	0.0	0.0	chrX	48834822	48834853	(107206042)	+	(GA)n	Simple_repeat	1	32	(0)	4436923
19	0.0	0.0	0.0	chrX	48911419	48911439	(107129456)	+	(CA)n	Simple_repeat	1	21	(0)	4437078
2458	8.1	0.3	0.0	chrX	49123933	49124241	(106916654)	C	AluSc8	SINE/Alu	(0)	311	2	4437547
18	8.3	4.8	4.5	chrX	49270064	49270105	(106770790)	+	(GGC)n	Simple_repeat	1	44	(0)	4437811
18	32.0	1.4	0.0	chrX	49270086	49270158	(106770737)	+	GA-rich	Low_complexity	1	74	(0)	4437812
1801	26.2	8.7	7.2	chrX	53071275	53071735	(102969160)	C	MER20B	DNA/hAT-Charlie	(265)	518	6	4442993
31	2.8	2.7	0.0	chrX	53434096	53434132	(102606763)	+	(GATA)n	Simple_repeat	1	38	(0)	4443741
17	19.3	2.4	0.0	chrX	54440510	54440551	(101600344)	+	G-rich	Low_complexity	1	43	(0)	4445814
1958	14.4	4.2	0.0	chrX	68462511	68462808	(87578087)	+	AluSz	SINE/Alu	1	311	(1)	4456376
4034	13.0	0.3	6.2	chrX	68462809	68463279	(87577616)	+	MER41B	LTR/ERV1	165	634	(0)	4456375
12	13.9	0.0	0.0	chrX	71067797	71067820	(84973075)	+	(CTTC)n	Simple_repeat	1	24	(0)	4460741
14	21.3	1.9	5.5	chrX	71068074	71068127	(84972768)	+	(CCTC)n	Simple_repeat	1	55	(0)	4460742
2021	9.4	4.0	0.0	chrX	71207388	71207653	(84833242)	+	AluSg	SINE/Alu	1	277	(33)	4461024
58	1.9	0.0	0.0	chrX	71207654	71207707	(84833188)	+	(CA)n	Simple_repeat	1	54	(0)	4461025
52	22.0	0.8	0.0	chrX	73563335	73563363	(82477532)	+	GA-rich	Low_complexity	1	29	(0)	4464581
29	3.2	0.0	0.0	chrX	73563364	73563395	(82477500)	+	(CGT)n	Simple_repeat	1	32	(0)	4464582
52	22.0	0.8	0.0	chrX	73563396	73563487	(82477408)	+	GA-rich	Low_complexity	30	122	(0)	4464583
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
13	6.8	5.7	5.4	chrX	101408418	101408452	(54632443)	+	(CCCT)n	Simple_repeat	1	37	(0)	4495991
27	11.7	2.1	0.0	chrX	107673123	107673170	(48367725)	+	(GTGT)n	Simple_repeat	1	49	(0)	4504615
18	27.8	0.0	0.0	chrX	110317719	110317770	(45723125)	+	GA-rich	Low_complexity	1	52	(0)	4508208
14	9.3	0.0	0.0	chrX	110317827	110317849	(45723046)	+	(CCG)n	Simple_repeat	1	23	(0)	4508209
17	12.0	2.6	2.6	chrX	115968916	115968953	(40071942)	+	A-rich	Low_complexity	1	39	(0)	4516173
43	14.5	0.0	0.0	chrX	120309670	120309745	(35731150)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	4522742
16	12.1	3.6	0.0	chrX	120309745	120309772	(35731123)	+	(TG)n	Simple_repeat	1	29	(0)	4522743
12	23.9	0.0	2.4	chrX	120561001	120561041	(35479854)	+	G-rich	Low_complexity	1	41	(0)	4523167
13	18.2	0.0	0.0	chrX	120561247	120561277	(35479618)	+	(CGCTCC)n	Simple_repeat	1	31	(0)	4523168
38	11.2	4.9	2.3	chrX	123961642	123961723	(32079172)	+	(CCCT)n	Simple_repeat	1	86	(0)	4527820
22	20.1	4.2	2.7	chrX	129982405	129982476	(26058419)	+	(CTCC)n	Simple_repeat	1	75	(0)	4535724
17	4.9	0.0	0.0	chrX	129982601	129982621	(26058274)	+	(CA)n	Simple_repeat	1	21	(0)	4535725
18	16.8	0.0	0.0	chrX	130268800	130268834	(25772061)	+	GA-rich	Low_complexity	1	35	(0)	4536265
29	9.7	2.3	0.0	chrX	130958748	130958791	(25082104)	+	(TC)n	Simple_repeat	1	45	(0)	4537357
43	2.5	0.0	0.0	chrX	130958792	130958832	(25082063)	+	(CA)n	Simple_repeat	1	41	(0)	4537358
27196	1.4	0.1	0.0	chrX	130958932	130964957	(25075938)	+	L1PA2	LINE/L1	124	6154	(1)	4537359
3356	15.3	6.7	1.7	chrX	131728065	131728657	(24312238)	+	MER51A	LTR/ERV1	1	625	(9)	4538397
30	22.8	2.8	4.6	chrX	132488595	132488700	(23552195)	+	GA-rich	Low_complexity	1	109	(0)	4539413
25	23.8	0.0	2.7	chrX	132488895	132488967	(23551928)	+	(CAGCGG)n	Simple_repeat	1	73	(0)	4539414
33	0.0	0.0	0.0	chrX	132837333	132837360	(23203535)	+	(GT)n	Simple_repeat	1	28	(0)	4539991
36	0.0	0.0	0.0	chrX	136251450	136251483	(19789412)	+	(GGGCG)n	Simple_repeat	1	34	(0)	4545646
2253	9.6	0.0	1.0	chrX	154133913	154134225	(1906670)	C	AluSq2	SINE/Alu	(3)	310	1	4571329
1171	25.1	10.9	5.4	chrX	154134274	154134774	(1906121)	+	MLT1H	LTR/ERVL-MaLR	1	532	(17)	4571330
1103	11.4	26.5	0.0	chrX	154411162	154411380	(1629515)	+	AluJb	SINE/Alu	1	298	(14)	4571812
22	3.6	0.0	0.0	chrX	154428788	154428816	(1612079)	+	(GGC)n	Simple_repeat	1	29	(0)	4571851
24	24.1	0.0	1.5	chrX	154437168	154437232	(1603663)	+	(GCG)n	Simple_repeat	1	65	(0)	4571862