13	15.9	2.7	2.6	chr1	1033359	1033395	(247923027)	+	(GCACAC)n	Simple_repeat	1	38	(0)	1304
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
12	15.7	2.6	5.0	chr1	1273983	1274021	(247682401)	+	G-rich	Low_complexity	1	40	(0)	1544
233	22.6	3.1	0.0	chr1	2050070	2050131	(246906291)	C	MER5A	DNA/hAT-Charlie	(79)	110	47	2818
16	3.3	0.0	10.0	chr1	3796670	3796691	(245159731)	+	(GGGTG)n	Simple_repeat	1	19	(0)	4362
4056	13.3	0.5	8.9	chr1	3796692	3797417	(245159005)	C	MER4A	LTR/ERV1	(0)	664	1	4363
14	20.4	6.9	1.6	chr1	7783810	7783867	(241172555)	+	(CCTCT)n	Simple_repeat	1	62	(0)	10309
30	0.0	0.0	0.0	chr1	8817827	8817854	(240138568)	+	(T)n	Simple_repeat	1	28	(0)	12308
13	16.3	2.8	2.7	chr1	11060049	11060084	(237896338)	+	G-rich	Low_complexity	1	37	(0)	16951
22	9.0	3.8	5.5	chr1	11060218	11060270	(237896152)	+	G-rich	Low_complexity	1	55	(0)	16952
2175	12.5	0.0	0.0	chr1	11063674	11063993	(237892429)	+	AluSx1	SINE/Alu	1	312	(0)	16959
330	25.8	1.9	6.6	chr1	11063994	11064012	(237892410)	C	Charlie18a	DNA/hAT-Charlie	(157)	185	170	16958
2234	9.2	4.3	0.3	chr1	11064267	11064559	(237891863)	+	AluSq2	SINE/Alu	1	305	(8)	16960
454	27.8	3.1	0.0	chr1	13813522	13813647	(235142775)	+	MIRc	SINE/MIR	94	223	(45)	22074
381	26.0	11.7	9.5	chr1	17053579	17053778	(231902644)	+	MIRc	SINE/MIR	2	206	(62)	28580
74	0.0	0.0	2.7	chr1	18681692	18681766	(230274656)	+	(TTTAT)n	Simple_repeat	1	75	(0)	32180
259	27.9	1.7	2.7	chr1	22025238	22025366	(226931056)	C	MIRb	SINE/MIR	(28)	180	60	39248
204	28.8	19.6	2.1	chr1	22662175	22662500	(226293922)	+	L2b	LINE/L2	2976	3372	(3)	40613
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
18	0.0	0.0	0.0	chr1	27155281	27155300	(221801122)	+	(A)n	Simple_repeat	1	20	(0)	51052
13	10.4	2.9	5.6	chr1	27592594	27592628	(221363794)	+	(CTGAG)n	Simple_repeat	1	36	(0)	52085
248	26.0	5.2	1.4	chr1	27592660	27592733	(221363689)	+	MIR3	SINE/MIR	78	154	(54)	52086
17	4.9	0.0	0.0	chr1	27600463	27600483	(221355939)	+	(A)n	Simple_repeat	1	21	(0)	52098
17	5.2	0.0	14.6	chr1	27725927	27725981	(221230441)	+	(GCCC)n	Simple_repeat	1	55	(0)	52395
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
12	17.6	5.0	2.4	chr1	39576756	39576795	(209379627)	+	(GCG)n	Simple_repeat	1	42	(0)	76952
15	17.0	9.8	1.5	chr1	39576889	39576949	(209379473)	+	(CGGCG)n	Simple_repeat	1	67	(0)	76953
440	27.4	6.3	6.7	chr1	39577002	39577120	(209379302)	C	MER20B	DNA/hAT-Charlie	(23)	760	649	76954
2409	6.0	0.3	1.7	chr1	39577121	39577418	(209379004)	+	AluSc8	SINE/Alu	1	294	(17)	76955
55	0.0	0.0	0.0	chr1	39701576	39701622	(209254800)	+	(CA)n	Simple_repeat	1	47	(0)	77236
298	16.0	0.0	0.0	chr1	39701653	39701702	(209254720)	+	MLT1O	LTR/ERVL-MaLR	146	195	(347)	77237
19	19.0	0.0	0.0	chr1	43358713	43358754	(205597668)	+	(GCCCC)n	Simple_repeat	1	42	(0)	84214
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
1001	24.0	13.7	4.0	chr1	45881082	45881581	(203074841)	+	L1ME3C	LINE/L1	5564	6119	(4)	88959
2442	6.8	0.0	5.0	chr1	45881895	45882215	(203074207)	+	AluY	SINE/Alu	1	305	(6)	88960
20	6.7	0.0	2.9	chr1	46489707	46489740	(202466682)	+	(GCGGG)n	Simple_repeat	1	34	(0)	90134
12	24.2	5.5	1.7	chr1	46489857	46489911	(202466511)	+	(GGCCG)n	Simple_repeat	1	58	(0)	90135
22195	10.5	2.0	0.7	chr1	53810764	53814071	(195142351)	+	L1PB1	LINE/L1	255	3647	(3215)	103813
27	13.0	5.5	3.9	chr1	54406270	54406342	(194550080)	+	(CCGC)n	Simple_repeat	1	77	(0)	104999
28	3.3	0.0	0.0	chr1	54406358	54406388	(194550034)	+	(CCG)n	Simple_repeat	1	31	(0)	105000
252	21.7	10.1	7.8	chr1	54775267	54775464	(194180958)	C	MLT1K	LTR/ERVL-MaLR	(401)	194	1	105876
14	13.6	0.0	5.6	chr1	58783956	58783991	(190172431)	+	(CTGG)n	Simple_repeat	1	36	(0)	113506
17	18.5	0.0	0.0	chr1	59814721	59814751	(189141671)	+	(C)n	Simple_repeat	1	31	(0)	115494
740	19.2	4.6	0.0	chr1	62585835	62586001	(186370421)	C	MER5B	DNA/hAT-Charlie	(3)	175	1	120480
216	26.9	7.1	5.5	chr1	108201097	108201206	(140755216)	+	MIRc	SINE/MIR	99	210	(52)	186509
831	16.9	6.9	0.0	chr1	109099836	109099983	(139856439)	+	FRAM	SINE/Alu	1	159	(17)	187985
13	18.3	4.3	4.1	chr1	109397924	109397970	(139558452)	+	(CCGC)n	Simple_repeat	1	49	(0)	188516
14	19.9	1.5	8.7	chr1	112396195	112396262	(136560160)	+	(GCGGA)n	Simple_repeat	1	69	(0)	193030
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
16	25.7	1.8	1.7	chr1	114670043	114670115	(134286307)	+	(CCCCAG)n	Simple_repeat	1	73	(0)	197085
441	25.7	1.7	5.8	chr1	145958326	145958445	(102997977)	C	MIR3	SINE/MIR	(40)	168	54	211827
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
668	1.4	0.0	0.0	chr1	153671250	153671323	(95285099)	+	tRNA-Met-i	tRNA	1	74	(1)	224506
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
17	32.0	3.0	2.9	chr1	155002310	155002409	(93954013)	+	G-rich	Low_complexity	1	103	(0)	227187
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
13	15.7	2.7	2.7	chr1	156500883	156500931	(92455491)	+	G-rich	Low_complexity	1	49	(0)	230238
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
298	37.8	0.0	0.0	chr1	156890157	156890254	(92066168)	+	MIR3	SINE/MIR	109	206	(2)	230936
20	0.0	0.0	0.0	chr1	161225920	161225941	(87730481)	+	(T)n	Simple_repeat	1	22	(0)	237108
470	28.6	8.2	2.1	chr1	167538654	167538846	(81417576)	+	MLT1K	LTR/ERVL-MaLR	18	223	(372)	246861
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
890	31.0	3.1	2.8	chr1	192998026	192998999	(55957423)	+	L1PA17	LINE/L1	979	1903	(5312)	284195
20	11.8	2.6	0.0	chr1	198159292	198159329	(50797093)	+	(AGGA)n	Simple_repeat	1	39	(0)	290866
5008	11.8	2.4	1.6	chr1	200411471	200412304	(48544118)	+	MER21B	LTR/ERVL	1	841	(27)	294196
291	38.0	0.0	0.9	chr1	201828887	201829000	(47127422)	+	MIR3	SINE/MIR	20	132	(76)	296703
13	16.5	0.0	0.0	chr1	201829212	201829238	(47127184)	+	(GGC)n	Simple_repeat	1	27	(0)	296704
647	22.4	5.2	1.8	chr1	202213683	202213850	(46742572)	C	MIR	SINE/MIR	(60)	202	29	297497
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
661	2.7	0.0	0.0	chr1	204507028	204507102	(44449320)	C	tRNA-Lys-AAA	tRNA	(1)	75	1	301659
380	27.2	6.5	11.4	chr1	204515966	204516016	(44440406)	C	L3	LINE/CR1	(391)	3708	3665	301689
17	25.8	3.9	2.5	chr1	211579416	211579494	(37376928)	+	(GGCGCGG)n	Simple_repeat	1	80	(0)	312977
17	12.7	0.0	0.0	chr1	225924502	225924527	(23031895)	+	(C)n	Simple_repeat	1	26	(0)	334819
17	9.3	2.8	2.7	chr1	232630156	232630191	(16326231)	+	(CCGC)n	Simple_repeat	1	37	(0)	345179
3970	14.6	3.2	1.1	chr1	233679843	233680481	(15275941)	C	MER39B	LTR/ERV1	(0)	653	1	346752
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
24	14.3	0.0	0.0	chr1	234374097	234374135	(14582287)	+	(T)n	Simple_repeat	1	39	(0)	347764
15	13.1	2.0	8.0	chr1	244048243	244048291	(4908131)	+	(CCGCC)n	Simple_repeat	1	50	(0)	363519
15	16.7	2.4	2.3	chr1	246566454	246566495	(2389927)	+	(CCGCGAG)n	Simple_repeat	1	43	(0)	367694
684	23.5	4.8	0.0	chr1	248905786	248905964	(50458)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	370978
665	35.9	10.5	4.6	chr10	767215	767866	(133029556)	+	L1MEc	LINE/L1	16	710	(5690)	371824
15	5.6	0.0	0.0	chr10	1049464	1049482	(132747940)	+	(C)n	Simple_repeat	1	19	(0)	372220
19	12.0	0.0	2.6	chr10	5813435	5813472	(127983950)	+	(GGGAG)n	Simple_repeat	1	38	(0)	378339
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
1663	9.7	1.0	0.3	chr10	13080303	13080597	(120716825)	+	HERVIP10FH-int	LTR/ERV1	2041	2282	(2820)	390064
13	14.0	4.7	4.4	chr10	24724937	24724979	(109072443)	+	(TCACCC)n	Simple_repeat	1	45	(0)	408957
13	25.0	0.0	0.0	chr10	28303080	28303117	(105494305)	+	(GGCGG)n	Simple_repeat	1	38	(0)	414798
2089	11.3	0.3	5.2	chr10	29517130	29517457	(104279965)	+	AluJr	SINE/Alu	1	312	(0)	416998
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
13	21.6	0.0	6.1	chr10	46223077	46223125	(87574297)	+	(CCCAGT)n	Simple_repeat	1	49	(0)	437373
927	21.6	2.5	2.0	chr10	71768783	71768985	(62028437)	C	MIR	SINE/MIR	(46)	216	13	475871
1488	18.9	5.2	6.8	chr10	71769117	71769570	(62027852)	+	MER113	DNA/hAT-Charlie	74	519	(2)	475874
15	17.6	0.0	4.8	chr10	73997951	73997992	(59799430)	+	G-rich	Low_complexity	1	42	(0)	480356
16	0.0	0.0	0.0	chr10	78029613	78029630	(55767792)	+	(T)n	Simple_repeat	1	18	(0)	487025
1355	23.9	4.4	4.0	chr10	79022270	79022696	(54774726)	+	Charlie1b	DNA/hAT-Charlie	95	523	(0)	488904
290	20.9	4.3	0.0	chr10	79022704	79022770	(54774652)	+	MLT1M	LTR/ERVL-MaLR	124	193	(479)	488905
30	13.5	5.6	5.3	chr10	79826315	79826404	(53971018)	+	(GGC)n	Simple_repeat	1	95	(0)	490210
27	14.1	5.8	5.4	chr10	87342359	87342445	(46454977)	+	(GGC)n	Simple_repeat	1	92	(0)	501147
17	4.9	0.0	0.0	chr10	100535881	100535901	(33261521)	+	(T)n	Simple_repeat	1	21	(0)	523518
14	16.6	2.3	4.4	chr10	100569708	100569751	(33227671)	+	(TGAGTG)n	Simple_repeat	1	45	(0)	523580
36	20.6	3.5	3.4	chr10	102743955	102744068	(31053354)	+	GA-rich	Low_complexity	1	118	(0)	527500
13	9.1	0.0	3.9	chr10	102918287	102918312	(30879110)	+	(CTCC)n	Simple_repeat	1	26	(0)	527858
973	25.3	13.6	9.3	chr10	103736816	103737307	(30060115)	+	MLT1K	LTR/ERVL-MaLR	65	580	(15)	529537
763	17.4	0.0	1.5	chr10	104232495	104232628	(29564794)	+	MER5A1	DNA/hAT-Charlie	1	132	(34)	530387
927	26.4	19.1	2.6	chr10	119687516	119687864	(14109558)	+	L1MEg	LINE/L1	161	607	(5635)	554381
18	10.5	0.0	0.0	chr10	121975069	121975099	(11822323)	+	(GGGAGC)n	Simple_repeat	1	31	(0)	558054
14	15.2	0.0	7.1	chr10	121975098	121975152	(11822270)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	558055
12	24.2	3.5	3.4	chr10	121975232	121975288	(11822134)	+	(GCGCCA)n	Simple_repeat	1	59	(0)	558056
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
1379	16.6	1.7	0.4	chr10	131900258	131900492	(1896930)	+	AluJb	SINE/Alu	39	276	(36)	571059
13	16.6	7.3	0.0	chr11	3797686	3797726	(131288896)	+	GA-rich	Low_complexity	1	44	(0)	577721
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
23	14.0	2.1	0.0	chr11	10858202	10858248	(124228374)	+	(AGCCGC)n	Simple_repeat	1	48	(0)	588254
11	14.8	4.9	4.7	chr11	13277392	13277432	(121809190)	+	G-rich	Low_complexity	1	43	(0)	592124
13	33.7	1.4	1.4	chr11	13277699	13277770	(121808852)	+	G-rich	Low_complexity	1	73	(0)	592125
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
14	25.3	0.0	0.0	chr11	19116935	19116976	(115969646)	+	G-rich	Low_complexity	1	42	(0)	601652
230	34.7	7.4	0.7	chr11	32288173	32288323	(102798299)	+	MER5B	DNA/hAT-Charlie	1	162	(16)	621315
35	20.8	2.5	4.8	chr11	45146945	45147065	(89939557)	+	G-rich	Low_complexity	1	124	(0)	641573
12	16.3	2.8	2.7	chr11	45147136	45147171	(89939451)	+	(CTCCTCG)n	Simple_repeat	1	37	(0)	641574
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
17	24.0	0.0	0.0	chr11	57335781	57335819	(77750803)	+	GA-rich	Low_complexity	1	39	(0)	653480
227	23.7	5.0	7.3	chr11	57657196	57657277	(77429345)	C	L2a	LINE/L2	(0)	3426	3347	654218
22	0.0	0.0	0.0	chr11	57667366	57667389	(77419233)	+	(A)n	Simple_repeat	1	24	(0)	654240
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
16	0.0	0.0	0.0	chr11	62728033	62728050	(72358572)	+	(T)n	Simple_repeat	1	18	(0)	662642
3229	16.7	6.5	0.8	chr11	62757737	62758341	(72328281)	C	MER21B	LTR/ERVL	(226)	642	1	662725
285	34.3	9.0	1.7	chr11	62842221	62842395	(72244227)	+	MIRb	SINE/MIR	3	191	(77)	662923
1339	17.9	0.0	0.0	chr11	63974027	63974238	(71112384)	C	AluSx	SINE/Alu	(100)	212	1	664776
641	18.7	3.8	4.5	chr11	63974239	63974313	(71112309)	C	AluSg	SINE/Alu	(234)	76	1	664775
461	30.3	10.0	5.4	chr11	64372728	64373133	(70713489)	C	MLT1K	LTR/ERVL-MaLR	(26)	569	143	665487
18	23.7	0.0	3.5	chr11	64723067	64723124	(70363498)	+	(CCGC)n	Simple_repeat	1	58	(0)	666109
17	21.5	3.4	4.9	chr11	65354770	65354828	(69731794)	+	(GC)n	Simple_repeat	1	61	(0)	667385
22	24.2	1.9	6.5	chr11	65919124	65919228	(69167394)	+	G-rich	Low_complexity	1	107	(0)	668433
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
212	30.7	2.6	0.0	chr11	67483612	67483686	(67602936)	C	MIR3	SINE/MIR	(25)	183	107	671732
198	29.9	3.0	4.9	chr11	69010934	69011035	(66075587)	C	MIRb	SINE/MIR	(99)	169	70	674381
14	24.8	3.0	4.3	chr11	69011102	69011168	(66075454)	+	(CGCC)n	Simple_repeat	1	69	(0)	674382
13	20.1	0.0	2.8	chr11	71448564	71448599	(63638023)	+	(GCCCC)n	Simple_repeat	1	36	(0)	678281
22	18.5	0.0	2.2	chr11	73242340	73242384	(61844238)	+	(GT)n	Simple_repeat	1	45	(0)	681464
13	15.3	7.7	5.7	chr11	73242602	73242666	(61843956)	+	(CCCACTC)n	Simple_repeat	1	70	(0)	681465
34	2.8	0.0	0.0	chr11	75815232	75815268	(59271354)	+	(CAGCGGCGG)n	Simple_repeat	1	37	(0)	686819
16	9.7	0.0	0.0	chr11	92550765	92550786	(42535836)	+	(T)n	Simple_repeat	1	22	(0)	714330
37	5.1	0.0	0.0	chr11	95156195	95156235	(39930387)	+	(AC)n	Simple_repeat	1	41	(0)	718212
396	25.9	5.1	5.1	chr11	102613331	102613448	(32473174)	+	L2b	LINE/L2	3258	3375	(0)	728220
224	31.1	0.0	1.6	chr11	102613487	102613548	(32473074)	C	MER5A	DNA/hAT-Charlie	(0)	189	129	728221
192	32.1	0.0	0.0	chr11	102613546	102613598	(32473024)	+	MER5A	DNA/hAT-Charlie	115	167	(22)	728222
291	17.6	11.9	0.0	chr11	118792759	118792832	(16293790)	+	MER89	LTR/ERV1	1	84	(475)	753568
1669	16.8	6.3	2.6	chr11	118792811	118793159	(16293463)	+	MER89	LTR/ERV1	197	559	(0)	753568
31	0.0	0.0	0.0	chr11	119085173	119085201	(16001421)	+	(T)n	Simple_repeat	1	29	(0)	754231
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
3217	17.2	5.2	3.2	chr11	132863427	132863927	(2222695)	+	MER39B	LTR/ERV1	1	512	(141)	775167
226	30.8	3.2	4.2	chr11	133403841	133403935	(1682687)	C	L2a	LINE/L2	(0)	3426	3333	775880
1003	27.1	3.4	3.9	chr11	133403945	133404382	(1682240)	C	MLT1C	LTR/ERVL-MaLR	(27)	440	5	775881
2700	10.9	8.7	7.8	chr12	689485	689961	(132585348)	+	MER51E	LTR/ERV1	1	482	(0)	779255
594	27.2	11.3	1.2	chr12	1804562	1804814	(131470495)	+	MLT1J	LTR/ERVL-MaLR	28	309	(203)	781294
232	18.6	11.4	0.0	chr12	1804831	1804900	(131470409)	+	MLT1J	LTR/ERVL-MaLR	392	470	(42)	781294
14	19.3	2.3	2.3	chr12	6493834	6493876	(126781433)	+	(CGGAGC)n	Simple_repeat	1	44	(0)	788830
12	16.3	2.8	2.7	chr12	6556140	6556175	(126719134)	+	G-rich	Low_complexity	1	37	(0)	788936
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
31298	8.5	0.5	0.1	chr12	8558451	8562470	(124712839)	C	HERVK22-int	LTR/ERVK	(488)	6349	2316	792443
3924	16.0	9.3	0.8	chr12	8562501	8563287	(124712022)	+	L1PA15-16	LINE/L1	1492	2352	(4501)	792444
773	30.5	3.6	0.3	chr12	29901440	29901738	(103373571)	C	LTR78	LTR/ERV1	(0)	1304	996	823003
52	0.0	0.0	0.0	chr12	48903938	48903984	(84371325)	+	(AAAT)n	Simple_repeat	1	47	(0)	846050
396	37.0	4.0	1.6	chr12	50084770	50085011	(83190298)	+	MIRc	SINE/MIR	18	265	(3)	848383
14	24.9	0.0	0.0	chr12	50085032	50085070	(83190239)	+	G-rich	Low_complexity	1	39	(0)	848384
17	24.8	3.5	0.0	chr12	50085265	50085321	(83189988)	+	G-rich	Low_complexity	1	59	(0)	848385
14	18.2	0.0	0.0	chr12	53452109	53452139	(79823170)	+	(CAG)n	Simple_repeat	1	31	(0)	854795
13	19.5	8.3	1.5	chr12	55829559	55829618	(77445691)	+	(CTCCCGG)n	Simple_repeat	1	65	(0)	858322
18	22.4	1.3	6.5	chr12	55829619	55829629	(77445680)	+	(CCGCCT)n	Simple_repeat	6	77	(0)	858323
13	13.2	0.0	0.0	chr12	55974045	55974069	(77301240)	+	(GAG)n	Simple_repeat	1	25	(0)	858642
272	21.9	0.0	8.8	chr12	56223992	56224071	(77051238)	C	MIRb	SINE/MIR	(186)	82	10	859121
12	16.3	2.8	2.7	chr12	56224440	56224475	(77050834)	+	G-rich	Low_complexity	1	37	(0)	859122
12	25.8	0.0	0.0	chr12	56300596	56300632	(76974677)	+	(TTCCCTT)n	Simple_repeat	1	37	(0)	859259
2183	12.5	0.0	0.3	chr12	56360580	56360883	(76914426)	C	AluJb	SINE/Alu	(8)	304	2	859381
17	19.3	0.0	2.3	chr12	56488251	56488293	(76787016)	+	G-rich	Low_complexity	1	43	(0)	859634
2293	11.0	0.0	0.0	chr12	57487567	57487874	(75787435)	+	AluSx	SINE/Alu	1	308	(4)	861402
252	27.1	2.0	4.0	chr12	57782459	57782558	(75492751)	+	MIRc	SINE/MIR	168	265	(3)	861818
4246	13.2	4.0	4.8	chr12	71804093	71804827	(61470482)	+	LTR1F1	LTR/ERV1	1	729	(0)	882901
625	29.9	3.9	2.6	chr12	71804828	71804926	(61470383)	+	L2a	LINE/L2	3323	3422	(4)	882900
15	12.8	2.8	2.7	chr12	105330657	105330692	(27944617)	+	G-rich	Low_complexity	1	37	(0)	934181
764	22.7	13.4	5.1	chr12	110102154	110102548	(23172761)	C	MLT1L	LTR/ERVL-MaLR	(29)	581	149	944033
913	16.8	3.9	0.0	chr12	110102552	110102724	(23172585)	+	MER20	DNA/hAT-Charlie	4	183	(36)	944034
401	36.7	2.2	4.3	chr12	113196805	113196989	(20078320)	C	MIRb	SINE/MIR	(6)	262	82	951029
215	23.9	0.0	0.0	chr12	113196984	113197029	(20078280)	+	L2a	LINE/L2	3381	3426	(0)	951030
946	12.9	0.0	2.1	chr12	113197197	113197336	(20077973)	C	FLAM_C	SINE/Alu	(6)	137	1	951031
14504	9.8	2.2	0.5	chr12	116756445	116760863	(16514446)	C	L1PB1	LINE/L1	(2110)	4752	252	958850
1200	13.6	7.0	0.0	chr12	118055183	118055380	(15219929)	+	MER20	DNA/hAT-Charlie	5	217	(2)	961720
392	28.1	8.6	3.9	chr12	118874881	118875058	(14400251)	C	MLT1O	LTR/ERVL-MaLR	(246)	296	110	963534
1100	28.7	9.7	1.3	chr12	118875134	118875630	(14399679)	C	LTR16E2	LTR/ERVL	(14)	554	1	963535
406	30.8	2.2	0.8	chr12	119444444	119444577	(13830732)	C	MamGypLTR3	LTR/Gypsy	(21)	873	738	964800
367	29.4	10.6	2.0	chr12	119444737	119444882	(13830427)	C	MamGypLTR3	LTR/Gypsy	(622)	272	113	964800
2357	8.0	0.0	0.0	chr12	121589950	121590261	(11685048)	+	AluSx	SINE/Alu	1	312	(0)	969745
1136	26.4	7.7	1.0	chr12	122064182	122064568	(11210741)	+	MLT1K	LTR/ERVL-MaLR	145	559	(36)	971015
15	32.2	0.0	1.6	chr12	123712361	123712423	(9562886)	+	(GCG)n	Simple_repeat	1	63	(0)	974781
939	29.1	7.2	4.0	chr12	125228764	125229235	(8046074)	+	MLT1L	LTR/ERVL-MaLR	121	608	(2)	977830
601	29.3	9.9	6.3	chr12	127162363	127162741	(6112568)	+	MLT1K	LTR/ERVL-MaLR	70	463	(132)	981010
39	21.6	3.4	5.2	chr12	128823828	128823975	(4451334)	+	(GCC)n	Simple_repeat	1	153	(0)	983925
1633	19.0	1.0	1.0	chr12	128824186	128824474	(4450835)	C	AluJr	SINE/Alu	(15)	297	9	983926
14	24.3	2.0	2.0	chr12	129904357	129904406	(3370903)	+	G-rich	Low_complexity	1	51	(0)	985828
362	24.6	4.3	4.3	chr12	131755197	131755311	(1519998)	+	MIR	SINE/MIR	81	195	(67)	988532
16	11.7	0.0	0.0	chr13	19958702	19958735	(94405593)	+	(CCT)n	Simple_repeat	1	34	(0)	993492
1566	18.4	6.7	2.4	chr13	21297399	21297738	(93066590)	C	MLT1C-int	LTR/ERVL-MaLR	(1)	1370	1015	995869
2430	15.7	8.6	4.3	chr13	25632026	25632559	(88731769)	C	MER21B	LTR/ERVL	(309)	559	1	1002113
252	17.6	6.3	2.6	chr13	36999490	36999565	(77364763)	+	MER53	DNA/hAT	3	81	(112)	1019392
1152	26.4	10.4	3.1	chr13	41589454	41589494	(72774834)	+	LTR33	LTR/ERVL	55	90	(425)	1026072
2098	22.0	11.2	0.9	chr13	41589495	41590071	(72774257)	+	LTR48B	LTR/ERV1	1	644	(0)	1026073
208	0.0	0.0	0.0	chr13	44142133	44142311	(70222017)	+	(CTCGG)n	Simple_repeat	1	179	(0)	1029840
4420	10.1	2.3	0.3	chr13	49635410	49636015	(64728313)	C	MER51A	LTR/ERV1	(16)	618	1	1038741
13	19.7	0.0	6.5	chr13	49936438	49936483	(64427845)	+	G-rich	Low_complexity	1	46	(0)	1039354
8889	21.3	5.0	2.7	chr13	79970627	79974921	(34389407)	C	L1PA17	LINE/L1	(2337)	4578	343	1079622
1631	15.5	4.5	3.9	chr13	94143608	94143891	(20220437)	+	AluJb	SINE/Alu	2	287	(25)	1097864
17	14.0	0.0	6.7	chr13	100675097	100675141	(13689187)	+	G-rich	Low_complexity	1	45	(0)	1108313
16	10.7	0.0	3.1	chr13	102596926	102596957	(11767371)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1111016
28	6.0	0.0	0.0	chr13	109786502	109786536	(4577792)	+	(GCT)n	Simple_repeat	1	35	(0)	1120505
12	22.4	3.1	6.1	chr13	109786754	109786817	(4577511)	+	(CGCCCC)n	Simple_repeat	1	66	(0)	1120506
12	24.2	2.6	0.0	chr13	109786820	109786858	(4577470)	+	G-rich	Low_complexity	1	40	(0)	1120507
442	24.7	1.8	5.8	chr13	112619567	112619697	(1744631)	C	MIR	SINE/MIR	(19)	249	114	1123711
2705	12.8	8.9	0.0	chr13	112619700	112620138	(1744190)	+	MER51E	LTR/ERV1	1	482	(0)	1123712
348	29.9	8.9	3.0	chr14	21095381	21095549	(85948169)	+	MIR3	SINE/MIR	23	202	(6)	1129077
285	27.3	6.8	2.6	chr14	21095818	21095930	(85947788)	+	L3b	LINE/CR1	4957	5074	(158)	1129078
4354	11.5	1.1	0.5	chr14	21308566	21309205	(85734513)	C	LTR9B	LTR/ERV1	(0)	644	1	1129498
35	14.5	3.8	2.4	chr14	23321464	23321543	(83722175)	+	(GCG)n	Simple_repeat	1	83	(0)	1132700
14	18.4	2.1	4.2	chr14	24141475	24141521	(82902197)	+	(GCCCCCG)n	Simple_repeat	1	48	(0)	1133811
14	19.1	3.9	3.8	chr14	24368010	24368060	(82675658)	+	G-rich	Low_complexity	1	53	(0)	1134158
23764	16.4	4.0	1.2	chr14	28293455	28296857	(78746861)	C	L1PREC2	LINE/L1	(3753)	4388	836	1139085
675	29.0	13.2	1.8	chr14	36086232	36086760	(70956958)	C	L2a	LINE/L2	(12)	3414	2811	1151135
3534	19.9	4.8	2.9	chr14	36086897	36087743	(70955975)	+	L1ME1	LINE/L1	5285	6150	(29)	1151136
278	34.2	0.9	3.4	chr14	49310263	49310380	(57733338)	+	L3	LINE/CR1	1387	1501	(2598)	1167759
16	29.8	1.6	0.0	chr14	51095108	51095183	(55948535)	+	(CCGCC)n	Simple_repeat	1	77	(0)	1170951
277	27.8	7.0	8.9	chr14	51989095	51989240	(55054478)	+	L2c	LINE/L2	3242	3384	(3)	1172297
537	25.3	13.2	0.0	chr14	54813971	54814128	(52229590)	C	MIR	SINE/MIR	(1)	261	80	1176489
926	19.4	1.0	5.9	chr14	57270910	57271128	(49772590)	+	MER3	DNA/hAT-Charlie	1	208	(1)	1180529
466	22.8	4.1	8.7	chr14	57271129	57271234	(49772484)	C	L1ME5	LINE/L1	(362)	5832	5730	1180528
714	30.2	13.4	2.4	chr14	57271270	57272053	(49771665)	C	L1M5	LINE/L1	(506)	5617	4721	1180530
11	11.2	6.9	0.0	chr14	68979327	68979355	(38064363)	+	G-rich	Low_complexity	1	31	(0)	1198598
12	16.6	0.0	0.0	chr14	69879353	69879379	(37164339)	+	(CCCGC)n	Simple_repeat	1	27	(0)	1200349
23	16.3	0.0	2.0	chr14	74493501	74493550	(32550168)	+	(CCCGC)n	Simple_repeat	1	50	(0)	1208642
420	27.6	2.0	9.1	chr14	74762815	74763094	(32280624)	C	L1MD	LINE/L1	(1534)	4612	4360	1209137
21217	9.9	2.9	1.9	chr14	75797849	75801364	(31242354)	C	L1PB1	LINE/L1	(0)	4473	940	1211105
15	16.5	0.0	2.8	chr14	89416113	89416148	(17627570)	+	(CGCGCA)n	Simple_repeat	1	36	(0)	1232038
1660	19.5	0.0	2.0	chr14	90444833	90445134	(16598584)	C	AluJo	SINE/Alu	(6)	306	11	1233934
23	24.8	2.0	5.0	chr14	92106577	92106675	(14937043)	+	(CCCCG)n	Simple_repeat	1	101	(0)	1236895
359	32.6	5.8	4.3	chr14	93538369	93538689	(13505029)	C	L2a	LINE/L2	(0)	3426	3042	1239630
16	0.0	0.0	0.0	chr14	93538805	93538822	(13504896)	+	(A)n	Simple_repeat	1	18	(0)	1239631
13	16.9	3.0	0.0	chr14	94081174	94081206	(12962512)	+	(GCAGCT)n	Simple_repeat	1	34	(0)	1240581
14	21.0	2.6	0.0	chr14	99480896	99480934	(7562784)	+	(CCCGCC)n	Simple_repeat	1	40	(0)	1250094
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
2291	11.1	1.3	0.0	chr14	100446273	100446578	(6597140)	+	AluSx1	SINE/Alu	1	310	(2)	1251878
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
14	13.0	9.5	0.0	chr14	102592422	102592463	(4451255)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1255259
12	18.1	2.4	4.8	chr14	103715441	103715481	(3328237)	+	(CTC)n	Simple_repeat	1	42	(0)	1257365
30	3.1	0.0	0.0	chr14	104342231	104342263	(2701455)	+	(GGGGC)n	Simple_repeat	1	33	(0)	1258326
13	26.6	2.9	4.3	chr14	104753024	104753091	(2290627)	+	(CCGCG)n	Simple_repeat	1	70	(0)	1258777
341	12.2	9.0	3.0	chr15	33194606	33194709	(68796480)	+	AluJb	SINE/Alu	26	201	(101)	1280988
13	16.0	0.0	3.2	chr15	43493120	43493150	(58498039)	+	(CGC)n	Simple_repeat	1	31	(0)	1297100
225	28.6	1.4	0.0	chr15	43493339	43493408	(58497781)	C	Plat_L3	LINE/CR1	(0)	3586	3516	1297101
526	25.4	15.1	2.3	chr15	56782560	56782777	(45208412)	+	MIRb	SINE/MIR	3	253	(15)	1317603
275	14.6	0.0	0.0	chr15	56782744	56782784	(45208405)	+	L2a	LINE/L2	3374	3414	(12)	1317604
413	31.0	12.4	4.8	chr15	56783011	56783278	(45207911)	C	L2c	LINE/L2	(3)	3384	3094	1317605
3103	9.5	5.9	1.3	chr15	64038778	64039227	(37951962)	+	MER4A1	LTR/ERV1	1	472	(0)	1329635
228	32.7	7.4	8.5	chr15	67011043	67011206	(34979983)	C	MamTip2	DNA/hAT-Tip100	(75)	230	69	1335878
330	28.6	14.5	5.1	chr15	68389496	68389613	(33601576)	+	MIRc	SINE/MIR	38	168	(100)	1338257
449	27.2	4.7	4.7	chr15	68389840	68390051	(33601138)	C	MER121	DNA/hAT?	(80)	321	110	1338258
315	31.2	3.0	1.5	chr15	73994361	73994490	(27996699)	+	L2c	LINE/L2	3256	3387	(0)	1348060
20	7.9	0.0	0.0	chr15	74873424	74873450	(27117739)	+	(C)n	Simple_repeat	1	27	(0)	1349665
13	25.9	4.0	3.9	chr15	76931545	76931618	(25059571)	+	(CGCCG)n	Simple_repeat	1	77	(0)	1353249
297	35.1	5.4	4.3	chr15	78358384	78358639	(23632550)	C	LTR84b	LTR/ERVL	(502)	259	1	1355715
363	27.3	7.6	2.0	chr15	79296462	79296659	(22694530)	C	Tigger12	DNA/TcMar-Tigger	(90)	2385	2176	1357624
918	12.6	2.5	2.9	chr15	79296681	79296837	(22694352)	C	MER20	DNA/hAT-Charlie	(49)	170	10	1357625
243	32.3	0.0	0.0	chr15	79296868	79296929	(22694260)	C	Tigger12c	DNA/TcMar-Tigger	(517)	217	156	1357626
188	28.6	0.0	0.0	chr15	84023739	84023794	(17967395)	C	L3	LINE/CR1	(5)	4094	4039	1365508
1693	23.0	5.1	2.6	chr15	84023802	84023974	(17967215)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	338	1365509
195	35.5	8.8	5.6	chr15	90932757	90932953	(11058236)	C	L2c	LINE/L2	(47)	3340	3137	1377370
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
264	34.2	5.5	5.5	chr15	92079238	92079305	(9911884)	C	MIRc	SINE/MIR	(28)	240	174	1379336
1660	20.4	5.6	3.9	chr15	92079306	92079688	(9911501)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1379337
2416	11.5	13.5	2.6	chr16	278988	279415	(90058930)	+	MER51E	LTR/ERV1	1	482	(0)	1394518
14	24.1	3.1	4.5	chr16	589601	589664	(89748681)	+	(GGC)n	Simple_repeat	1	66	(0)	1394982
20	26.3	3.5	2.3	chr16	1308924	1309008	(89029337)	+	(CGCCCC)n	Simple_repeat	1	88	(0)	1395731
24	20.9	2.9	1.4	chr16	1826642	1826709	(88511636)	+	(GCCCC)n	Simple_repeat	1	70	(0)	1396438
722	23.7	6.3	1.1	chr16	2010039	2010217	(88328128)	C	MER53	DNA/hAT	(4)	189	1	1396770
269	28.9	4.5	0.0	chr16	2537592	2537730	(87800615)	+	MIR3	SINE/MIR	23	169	(99)	1397595
19	7.3	0.0	0.0	chr16	2537731	2537759	(87800586)	+	(CCGCC)n	Simple_repeat	1	29	(0)	1397596
2779	19.8	9.1	7.2	chr16	3129170	3129828	(87208517)	C	LTR41	LTR/ERVL	(96)	672	2	1398554
431	27.5	1.6	1.6	chr16	3129829	3129950	(87208395)	C	ERVL-B4-int	LTR/ERVL	(2482)	3232	3111	1398556
29	5.0	0.0	0.0	chr16	3135099	3135139	(87203206)	+	(CGGGGG)n	Simple_repeat	1	41	(0)	1398575
834	23.2	1.9	1.5	chr16	6682509	6682714	(83655631)	C	MER20	DNA/hAT-Charlie	(1)	218	12	1405713
19	25.2	0.8	4.6	chr16	6682820	6682911	(83655434)	+	A-rich	Low_complexity	1	88	(0)	1405714
391	31.0	13.9	3.3	chr16	7055475	7055808	(83282537)	C	MLT1L	LTR/ERVL-MaLR	(235)	375	1	1406440
946	22.3	3.2	0.0	chr16	7513483	7513693	(82824652)	C	MER20	DNA/hAT-Charlie	(1)	218	1	1407289
15	7.8	0.0	6.5	chr16	9091355	9091385	(81246960)	+	(CTC)n	Simple_repeat	1	31	(0)	1410574
297	22.6	2.1	7.0	chr16	10553201	10553300	(79785045)	C	L1ME4b	LINE/L1	(74)	818	724	1413697
259	25.0	7.4	0.0	chr16	10553307	10553394	(79784951)	+	LTR79	LTR/ERVL	9	103	(424)	1413698
315	27.9	9.0	8.6	chr16	10981682	10981809	(79356536)	C	L1ME4b	LINE/L1	(37)	855	725	1414699
1044	21.9	1.8	0.9	chr16	10981810	10982026	(79356319)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1414700
315	27.9	9.0	8.6	chr16	10982027	10982140	(79356205)	C	L1ME4b	LINE/L1	(168)	724	612	1414699
23	17.5	6.9	0.0	chr16	11797030	11797087	(78541258)	+	(CG)n	Simple_repeat	1	62	(0)	1416500
36	25.6	1.2	7.0	chr16	11797137	11797305	(78541040)	+	(GCG)n	Simple_repeat	1	171	(0)	1416501
2029	10.4	4.7	0.3	chr16	23296720	23297007	(67041338)	+	AluSc	SINE/Alu	1	301	(8)	1441923
15	0.0	0.0	5.0	chr16	23297008	23297023	(67041322)	+	(AG)n	Simple_repeat	2	17	(0)	1441924
311	30.4	9.0	4.7	chr16	23297178	23297367	(67040978)	C	L3	LINE/CR1	(693)	3406	3208	1441925
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
876	17.7	0.0	0.0	chr16	23596585	23596725	(66741620)	+	FLAM_C	SINE/Alu	1	141	(2)	1442648
1961	15.9	2.9	0.0	chr16	24150049	24150350	(66187995)	+	AluSx1	SINE/Alu	1	311	(1)	1443977
458	23.6	6.8	2.4	chr16	24150386	24150511	(66187834)	C	MLT1O	LTR/ERVL-MaLR	(297)	245	114	1443978
472	22.1	29.5	0.0	chr16	24150670	24150827	(66187518)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1443979
274	26.0	17.8	1.5	chr16	27083914	27084175	(63254170)	C	MLT1O	LTR/ERVL-MaLR	(146)	396	83	1450333
13	29.6	0.0	0.0	chr16	28863277	28863294	(61475051)	+	(CCCACC)n	Simple_repeat	2	46	(0)	1454615
13	11.7	3.6	0.0	chr16	28950961	28950988	(61387357)	+	(GGCGA)n	Simple_repeat	1	29	(0)	1454833
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
2264	8.0	1.4	0.3	chr16	30036803	30037083	(60301262)	+	AluSx1	SINE/Alu	1	285	(27)	1457112
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
16	19.6	0.0	5.8	chr16	30526709	30526760	(59811585)	+	(GCCCCC)n	Simple_repeat	1	52	(0)	1458285
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
387	28.4	16.6	1.0	chr16	57462315	57462527	(32875818)	C	L1ME3G	LINE/L1	(344)	580	317	1485115
366	17.7	0.0	0.0	chr16	58332976	58333037	(32005308)	+	MER5B	DNA/hAT-Charlie	116	177	(1)	1486889
246	35.2	9.3	3.6	chr16	58333363	58333636	(32004709)	C	LTR104_Mam	LTR/Gypsy	(1110)	399	109	1486890
1445	13.2	2.1	0.0	chr16	62069086	62069319	(28269026)	C	L1MC1	LINE/L1	(193)	6140	5902	1492820
572	33.0	14.2	0.6	chr16	67183210	67183556	(23154789)	+	L2b	LINE/L2	2927	3328	(47)	1501228
242	22.9	13.8	9.2	chr16	69424091	69424222	(20914123)	C	MIR	SINE/MIR	(82)	180	49	1505778
249	25.9	4.5	2.3	chr16	69762042	69762128	(20576217)	+	MIR	SINE/MIR	102	190	(72)	1506513
447	24.4	4.4	4.4	chr16	70018538	70018674	(20319671)	+	MIR	SINE/MIR	98	234	(28)	1507074
1305	17.8	4.6	3.9	chr16	71484733	71485037	(18853308)	+	Charlie4a	DNA/hAT-Charlie	38	344	(164)	1509765
207	26.0	7.2	3.7	chr16	73616071	73616178	(16722167)	+	Penelope1_Vert	LINE/Penelope	475	586	(501)	1513271
28	10.6	0.0	0.0	chr16	74667122	74667162	(15671183)	+	(T)n	Simple_repeat	1	41	(0)	1515176
21	27.4	5.8	2.4	chr16	75566366	75566485	(14771860)	+	(CCGCTG)n	Simple_repeat	1	127	(0)	1517068
1098	30.6	3.5	4.5	chr16	84280851	84281312	(6057033)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	154	1532504
77	29.6	3.0	5.7	chr16	84618272	84618768	(5719577)	+	(CCTCTC)n	Simple_repeat	1	512	(0)	1533213
15	18.6	0.0	8.6	chr16	85689135	85689192	(4649153)	+	(CCGGC)n	Simple_repeat	1	58	(0)	1535214
263	32.5	8.7	1.6	chr16	86724081	86724208	(3614137)	C	MIRb	SINE/MIR	(107)	161	24	1537142
407	21.9	0.0	0.0	chr16	87057746	87057818	(3280527)	C	LTR83	LTR/ERVL	(411)	369	297	1537723
13	4.1	3.7	3.6	chr16	87388506	87388532	(2949813)	+	(AGAGG)n	Simple_repeat	1	28	(0)	1538349
40	2.5	0.0	0.0	chr16	87492912	87492952	(2845393)	+	(CGGCGA)n	Simple_repeat	1	41	(0)	1538508
409	19.6	4.2	0.0	chr16	87939538	87939629	(2398716)	C	MER51C	LTR/ERV1	(0)	640	545	1539364
1132	12.6	1.0	0.0	chr16	87939630	87939919	(2398426)	C	MER51E	LTR/ERV1	(154)	328	1	1539365
2472	5.4	0.0	0.0	chr16	89948269	89948562	(389783)	C	AluY	SINE/Alu	(17)	294	1	1542143
586	26.5	21.6	0.8	chr16	89957851	89958204	(380141)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	146	1542160
264	26.4	14.9	6.9	chr16	89958223	89958381	(379964)	C	MLT1K	LTR/ERVL-MaLR	(348)	247	74	1542161
2332	11.9	0.0	0.0	chr17	2870944	2871255	(80386186)	C	AluSq2	SINE/Alu	(1)	312	1	1550141
747	30.4	8.8	7.2	chr17	2871256	2871572	(80385869)	C	MLT1K	LTR/ERVL-MaLR	(260)	335	12	1550140
1185	24.7	0.4	2.1	chr17	3911843	3912131	(79345310)	+	MLT1K	LTR/ERVL-MaLR	147	430	(165)	1551994
2289	10.1	0.3	2.2	chr17	5055867	5056206	(78201235)	C	AluSc8	SINE/Alu	(0)	311	1	1554323
244	24.2	4.6	3.1	chr17	5419929	5419992	(77837449)	+	L2	LINE/L2	2380	2444	(975)	1555105
558	23.5	4.3	0.0	chr17	17750083	17750214	(65507227)	C	MLT1J2	LTR/ERVL-MaLR	(287)	161	24	1577279
406	29.8	3.2	3.2	chr17	17750257	17750412	(65507029)	C	MIRb	SINE/MIR	(3)	265	110	1577280
41	9.7	1.5	0.0	chr17	18039406	18039471	(65217970)	+	(GT)n	Simple_repeat	1	67	(0)	1577827
13	14.9	5.1	2.4	chr17	18225621	18225659	(65031782)	+	G-rich	Low_complexity	1	41	(0)	1578194
1548	25.5	8.9	0.9	chr17	21126195	21126741	(62130700)	C	L1M5	LINE/L1	(854)	5292	4698	1583713
29	0.0	0.0	0.0	chr17	21284781	21284807	(61972634)	+	(CGC)n	Simple_repeat	1	27	(0)	1584007
20	25.6	3.7	0.9	chr17	28041410	28041481	(55215960)	+	A-rich	Low_complexity	1	74	(0)	1587976
13	16.2	2.7	2.6	chr17	28041431	28041467	(55215974)	+	GA-rich	Low_complexity	1	38	(0)	1587977
16	20.6	0.0	2.4	chr17	28662211	28662251	(54595190)	+	(GCG)n	Simple_repeat	1	41	(0)	1589101
11	29.8	1.6	3.2	chr17	28812417	28812477	(54444964)	+	(CCCCAGC)n	Simple_repeat	1	62	(0)	1589377
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
16	24.8	4.3	2.7	chr17	30378664	30378733	(52878708)	+	GA-rich	Low_complexity	1	73	(0)	1592484
16	23.0	0.0	7.7	chr17	32444481	32444545	(50812896)	+	(CGG)n	Simple_repeat	1	65	(0)	1596845
25	28.1	0.0	6.6	chr17	35089283	35089292	(48168149)	+	(CCCCG)n	Simple_repeat	1	25	(96)	1601649
12	24.0	3.9	6.2	chr17	35089293	35089369	(48168072)	+	(CCCAGC)n	Simple_repeat	1	80	(0)	1601650
25	28.1	0.0	6.6	chr17	35089370	35089403	(48168038)	+	(CCCCG)n	Simple_repeat	26	121	(0)	1601649
18	3.7	3.6	0.0	chr17	35242829	35242856	(48014585)	+	(AAAAT)n	Simple_repeat	1	29	(0)	1601982
377	31.5	10.4	2.2	chr17	39177683	39177867	(44079574)	C	MIR3	SINE/MIR	(3)	205	4	1609485
2505	7.0	0.0	0.3	chr17	39460851	39461162	(43796279)	+	AluSx1	SINE/Alu	1	311	(1)	1610147
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
679	27.8	6.0	2.4	chr17	41388938	41389147	(41868294)	C	MIRb	SINE/MIR	(10)	258	41	1613550
13	0.0	0.0	8.0	chr17	42050479	42050503	(41206938)	+	(CCGC)n	Simple_repeat	1	25	(0)	1614843
13	17.2	7.8	4.3	chr17	42050740	42050803	(41206638)	+	(CGCCCCA)n	Simple_repeat	1	69	(0)	1614844
2354	5.5	2.0	0.7	chr17	42155250	42155542	(41101899)	C	AluSx	SINE/Alu	(15)	297	1	1615041
405	21.7	18.5	6.4	chr17	44008950	44009117	(39248324)	+	MamTip2	DNA/hAT-Tip100	69	267	(38)	1619051
12	22.4	3.5	5.1	chr17	44200421	44200477	(39056964)	+	(CTCCC)n	Simple_repeat	1	59	(0)	1619434
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
23	13.3	0.0	0.0	chr17	46225507	46225547	(37031894)	+	(GTCTCT)n	Simple_repeat	1	41	(0)	1623617
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
23	12.0	2.1	2.1	chr17	47650536	47650582	(35606859)	+	(CCTCCC)n	Simple_repeat	1	48	(0)	1626491
16	15.2	0.0	7.8	chr17	47821812	47821862	(35435579)	+	(CTCCCCT)n	Simple_repeat	1	51	(0)	1626785
2426	9.3	0.0	0.0	chr17	49193185	49193496	(34063945)	+	AluSx	SINE/Alu	1	312	(0)	1629401
554	24.7	10.3	4.2	chr17	49708479	49708668	(33548773)	+	MIRc	SINE/MIR	61	263	(5)	1630437
12	27.1	0.0	2.2	chr17	50560616	50560661	(32696780)	+	(GGCGCGC)n	Simple_repeat	1	46	(0)	1632032
13	3.0	10.0	6.8	chr17	50560724	50560763	(32696678)	+	(GCTC)n	Simple_repeat	1	44	(0)	1632033
25	26.4	0.0	1.4	chr17	50560762	50560835	(32696606)	+	(CGG)n	Simple_repeat	1	74	(0)	1632034
12	26.1	1.9	3.6	chr17	59331480	59331533	(23925908)	+	(GGCG)n	Simple_repeat	1	55	(0)	1647025
16	5.2	0.0	0.0	chr17	61863657	61863676	(21393765)	+	(A)n	Simple_repeat	1	20	(0)	1651744
14	9.2	0.0	11.4	chr17	63622483	63622535	(19634906)	+	(GGCG)n	Simple_repeat	1	46	(0)	1655052
28	23.7	1.4	0.0	chr17	74776580	74776653	(8480788)	+	(GTCGG)n	Simple_repeat	1	75	(0)	1674793
15	24.3	3.8	0.0	chr17	75456678	75456730	(7800711)	+	GA-rich	Low_complexity	1	55	(0)	1676192
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
249	5.9	0.0	0.0	chr17	76671636	76671669	(6585772)	+	Alu	SINE/Alu	1	34	(99)	1678524
18	10.3	2.1	6.2	chr17	77373272	77373318	(5884123)	+	G-rich	Low_complexity	1	48	(0)	1679958
19	18.9	0.0	0.0	chr17	80271098	80271139	(2986302)	+	(GGTG)n	Simple_repeat	1	42	(0)	1684799
19	20.2	5.9	0.0	chr17	81860579	81860629	(1396812)	+	(GC)n	Simple_repeat	1	54	(0)	1686834
291	29.8	8.5	2.1	chr17	82257131	82257459	(999982)	C	L1M5	LINE/L1	(770)	5376	5025	1687378
246	29.6	2.7	8.4	chr17	82257444	82257598	(999843)	+	L1MEc	LINE/L1	20	165	(6235)	1687379
1685	7.4	2.8	0.0	chr17	82367747	82367988	(889453)	C	LTR71B	LTR/ERV1	(0)	610	362	1687533
603	13.1	0.0	0.0	chr17	82367985	82368083	(889358)	C	LTR71B	LTR/ERV1	(150)	460	362	1687534
3098	7.6	2.0	0.0	chr17	82368081	82368530	(888911)	C	LTR71B	LTR/ERV1	(151)	459	1	1687535
13	0.0	0.0	0.0	chr17	82458441	82458457	(798984)	+	(GCC)n	Simple_repeat	1	17	(0)	1687667
4545	11.8	6.5	1.8	chr17	82754907	82755749	(501692)	C	MER4D1	LTR/ERV1	(72)	828	1	1688199
2736	29.8	2.7	2.8	chr18	3296459	3297771	(77075514)	+	L1PB3	LINE/L1	3	1313	(5550)	1694111
4598	18.1	7.4	3.0	chr18	3297767	3298490	(77074795)	+	L1PB3	LINE/L1	1764	2492	(4371)	1694111
9494	9.8	2.0	0.6	chr18	25743742	25745153	(54628132)	+	L1PA10	LINE/L1	471	1902	(4451)	1719757
443	29.1	8.2	2.9	chr18	26806267	26806507	(53566778)	+	MLT1K	LTR/ERVL-MaLR	34	288	(307)	1721544
22	24.6	3.2	0.0	chr18	35267705	35267766	(45105519)	+	(AT)n	Simple_repeat	1	64	(0)	1733077
385	27.9	16.7	1.6	chr18	37670298	37670545	(42702740)	+	MLT1K	LTR/ERVL-MaLR	142	434	(161)	1736363
14	10.4	6.5	0.0	chr18	47930805	47930835	(32442450)	+	(GGCT)n	Simple_repeat	1	33	(0)	1751015
385	29.1	13.4	0.6	chr18	51168220	51168412	(29204873)	+	MIRb	SINE/MIR	13	248	(20)	1756469
807	15.4	9.3	3.1	chr18	51168460	51168491	(29204794)	+	MER20	DNA/hAT-Charlie	48	92	(127)	1756470
41	0.0	0.0	0.0	chr18	51168492	51168526	(29204759)	+	(TG)n	Simple_repeat	1	35	(0)	1756471
807	15.4	9.3	3.1	chr18	51168527	51168654	(29204631)	+	MER20	DNA/hAT-Charlie	93	218	(1)	1756470
2290	17.0	3.2	1.6	chr18	58538690	58539114	(21834171)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1767396
17	20.9	0.0	0.0	chr18	58539335	58539374	(21833911)	+	G-rich	Low_complexity	1	40	(0)	1767397
23	20.3	7.6	0.0	chr18	62187169	62187247	(18186038)	+	G-rich	Low_complexity	1	85	(0)	1773094
12	28.8	0.0	0.0	chr18	62187299	62187340	(18185945)	+	(GCTGCA)n	Simple_repeat	1	42	(0)	1773095
29	17.6	0.0	0.0	chr18	62189252	62189303	(18183982)	+	(T)n	Simple_repeat	1	52	(0)	1773096
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
11	14.8	4.9	4.7	chr19	1261060	1261100	(57356516)	+	(AGCGCGG)n	Simple_repeat	1	43	(0)	1798477
189	32.6	2.2	0.0	chr19	1438118	1438212	(57179404)	C	MIR3	SINE/MIR	(80)	182	83	1798779
208	29.7	1.3	1.9	chr19	1507703	1507790	(57109826)	+	MIRb	SINE/MIR	178	262	(0)	1798897
1992	11.9	1.4	1.0	chr19	1542370	1542662	(57074954)	C	AluSq2	SINE/Alu	(19)	294	1	1798976
288	31.8	1.6	0.8	chr19	1542670	1542796	(57074820)	C	MamRep1527	LTR	(486)	483	356	1798977
184	20.0	0.0	4.3	chr19	1542901	1542947	(57074669)	C	MIRc	SINE/MIR	(103)	165	121	1798978
430	21.6	0.9	3.5	chr19	1790913	1791027	(56826589)	+	MLT1K	LTR/ERVL-MaLR	162	273	(322)	1799518
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
23	15.8	4.3	4.2	chr19	3094214	3094282	(55523334)	+	(CCCCG)n	Simple_repeat	1	72	(0)	1802406
782	15.0	2.2	2.9	chr19	3494387	3494526	(55123090)	+	AluJo	SINE/Alu	164	302	(10)	1803420
28	20.5	5.4	2.0	chr19	3971044	3971136	(54646480)	+	(GCC)n	Simple_repeat	1	98	(0)	1804459
23	26.0	1.3	1.3	chr19	4400558	4400634	(54216982)	+	(CGCCCG)n	Simple_repeat	1	77	(0)	1805510
15	12.6	8.9	2.0	chr19	4457698	4457742	(54159874)	+	(GGC)n	Simple_repeat	1	49	(0)	1805615
27	8.6	0.0	0.0	chr19	4457787	4457823	(54159793)	+	(A)n	Simple_repeat	1	37	(0)	1805616
21	27.1	4.2	2.0	chr19	4472226	4472321	(54145295)	+	(CTCCCG)n	Simple_repeat	1	100	(0)	1805675
242	30.6	13.0	1.6	chr19	4525177	4525359	(54092257)	C	L2	LINE/L2	(484)	2935	2729	1805779
216	30.4	7.4	1.8	chr19	4525366	4525479	(54092137)	+	L2b	LINE/L2	3081	3201	(174)	1805780
18	22.6	0.0	3.6	chr19	4867760	4867814	(53749802)	+	(CCCGC)n	Simple_repeat	1	55	(0)	1806716
15	9.7	2.7	5.3	chr19	6110541	6110577	(52507039)	+	(CCCG)n	Simple_repeat	1	38	(0)	1809426
1927	14.4	1.7	0.7	chr19	6504459	6504749	(52112867)	C	AluJo	SINE/Alu	(18)	294	1	1810417
947	15.8	1.8	17.0	chr19	6504770	6504786	(52112830)	+	MER20	DNA/hAT-Charlie	1	14	(205)	1810418
46	4.3	0.0	0.0	chr19	6504787	6504834	(52112782)	+	(GT)n	Simple_repeat	1	48	(0)	1810419
947	15.8	1.8	17.0	chr19	6504835	6505075	(52112541)	+	MER20	DNA/hAT-Charlie	15	219	(0)	1810418
797	27.6	10.9	6.2	chr19	7673841	7674257	(50943359)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	151	1813469
16	23.5	1.5	4.5	chr19	7830142	7830206	(50787410)	+	G-rich	Low_complexity	1	66	(0)	1813826
36	23.6	2.5	3.2	chr19	8005504	8005624	(50611992)	+	(GGC)n	Simple_repeat	1	124	(0)	1814131
15	17.1	2.4	2.4	chr19	8343231	8343271	(50274345)	+	(CCGCGC)n	Simple_repeat	1	42	(0)	1815070
16	17.0	0.0	5.4	chr19	8526036	8526046	(50091570)	+	(TC)n	Simple_repeat	1	11	(0)	1815489
2379	7.5	0.0	0.0	chr19	8526047	8526341	(50091275)	+	AluSg4	SINE/Alu	1	295	(15)	1815490
16	21.6	3.1	4.5	chr19	9835271	9835334	(48782282)	+	(GGCGGC)n	Simple_repeat	1	66	(0)	1818235
1352	11.4	0.0	0.5	chr19	10120092	10120104	(48497512)	+	AluSx1	SINE/Alu	120	132	(180)	1818935
2470	6.9	0.3	0.0	chr19	10120105	10120407	(48497209)	+	AluSx	SINE/Alu	1	304	(8)	1818936
38	8.5	0.0	0.0	chr19	12722562	12722612	(45895004)	+	(A)n	Simple_repeat	1	51	(0)	1825078
1198	9.2	0.0	0.0	chr19	13747480	13747631	(44869985)	C	AluSq	SINE/Alu	(22)	291	140	1827686
411	28.2	10.3	3.5	chr19	13903164	13903234	(44714382)	C	MIR	SINE/MIR	(16)	252	173	1828077
926	17.0	5.9	8.4	chr19	13903235	13903390	(44714226)	C	MER20	DNA/hAT-Charlie	(0)	219	62	1828078
2260	11.6	0.0	0.0	chr19	13903391	13903691	(44713925)	+	AluSx	SINE/Alu	1	301	(11)	1828079
926	17.0	5.9	8.4	chr19	13903692	13903759	(44713857)	C	MER20	DNA/hAT-Charlie	(158)	61	1	1828078
504	28.7	10.6	0.4	chr19	13974022	13974266	(44643350)	C	L2a	LINE/L2	(14)	3412	3140	1828245
13	24.8	0.0	3.9	chr19	14136937	14136987	(44480629)	+	(GCAGCGC)n	Simple_repeat	1	51	(0)	1828672
14	16.4	2.9	0.0	chr19	15113804	15113837	(43503779)	+	(CGAGGA)n	Simple_repeat	1	35	(0)	1831145
636	22.0	6.0	2.1	chr19	17441308	17441451	(41176165)	C	MER20	DNA/hAT-Charlie	(69)	150	1	1836356
516	32.1	3.6	3.1	chr19	17441530	17441722	(41175894)	+	MLT1K	LTR/ERVL-MaLR	164	357	(238)	1836357
507	27.2	15.0	2.4	chr19	17706938	17707322	(40910294)	+	L2b	LINE/L2	2915	3373	(2)	1837065
424	30.5	1.3	2.1	chr19	17747264	17747416	(40870200)	+	MIRb	SINE/MIR	35	196	(72)	1837175
520	29.2	6.5	17.7	chr19	17772111	17772409	(40845207)	C	MLT1K	LTR/ERVL-MaLR	(165)	430	147	1837244
12	15.9	5.7	0.0	chr19	18204228	18204262	(40413354)	+	(CCGCCT)n	Simple_repeat	1	37	(0)	1838360
16	24.4	1.6	4.7	chr19	18323042	18323104	(40294512)	+	(CGC)n	Simple_repeat	1	64	(0)	1838616
2252	11.2	1.9	0.3	chr19	19032155	19032459	(39585157)	C	AluSx1	SINE/Alu	(2)	310	1	1840110
2332	11.4	0.0	1.3	chr19	19821958	19822264	(38795352)	C	AluSq2	SINE/Alu	(10)	303	1	1841674
176	0.0	1.8	1.1	chr19	19865511	19865681	(38751935)	+	(GAAA)n	Simple_repeat	1	174	(0)	1841742
1142	15.0	10.0	1.9	chr19	20166671	20166983	(38450633)	+	MER57A-int	LTR/ERV1	2488	2828	(3359)	1842201
636	15.8	10.2	0.6	chr19	20238661	20238819	(38378797)	C	MER57A-int	LTR/ERV1	(3359)	2828	2653	1842318
881	17.8	6.2	4.0	chr19	20566024	20566321	(38051295)	C	MER57A-int	LTR/ERV1	(3382)	2805	2501	1842801
1129	16.2	6.2	1.8	chr19	20661802	20662127	(37955489)	C	MER57A-int	LTR/ERV1	(3359)	2828	2488	1842949
1113	18.1	4.4	2.6	chr19	20775749	20776060	(37841556)	+	MER57A-int	LTR/ERV1	2488	2805	(3382)	1843116
207	27.3	3.8	2.5	chr19	21852189	21852267	(36765349)	C	MIRc	SINE/MIR	(122)	146	67	1844652
2277	20.2	5.8	3.9	chr19	29276953	29277497	(29340119)	C	MER74A	LTR/ERVL	(0)	558	3	1850009
37	4.9	0.0	0.0	chr19	29277502	29277544	(29340072)	+	(TTCC)n	Simple_repeat	1	43	(0)	1850010
2024	23.3	4.8	7.6	chr19	32719307	32719544	(25898072)	C	LTR8	LTR/ERV1	(475)	216	2	1855368
19	26.0	1.4	4.0	chr19	33373697	33373770	(25243846)	+	(GGC)n	Simple_repeat	1	75	(0)	1856707
516	11.9	2.5	18.6	chr19	35596207	35596351	(23021265)	+	MER21B	LTR/ERVL	748	868	(0)	1860729
13	14.8	2.4	4.8	chr19	35995120	35995160	(22622456)	+	(GAGGCGG)n	Simple_repeat	1	42	(0)	1861643
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
14	24.5	0.0	2.2	chr19	36115480	36115524	(22502092)	+	(GCGGCG)n	Simple_repeat	1	45	(0)	1861899
1659	15.3	11.6	22.1	chr19	36771094	36771715	(21845901)	C	LTR25	LTR/ERV1	(64)	780	356	1863212
2453	6.8	0.0	0.0	chr19	36797031	36797325	(21820291)	C	AluY	SINE/Alu	(16)	295	1	1863279
12	4.1	3.5	6.7	chr19	38402967	38402995	(20214621)	+	(GGGGC)n	Simple_repeat	1	30	(0)	1866578
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
15	8.6	7.7	2.4	chr19	39342130	39342180	(19275436)	+	(CGCCC)n	Simple_repeat	1	53	(0)	1868895
60	24.3	4.3	4.1	chr19	39342375	39342630	(19274986)	+	(CGG)n	Simple_repeat	1	267	(0)	1868896
482	28.1	6.2	0.6	chr19	41161839	41161996	(17455620)	+	MIRb	SINE/MIR	33	200	(68)	1872750
1609	14.2	6.4	2.1	chr19	42306469	42306603	(16311013)	C	AluJo	SINE/Alu	(174)	138	1	1874988
12	12.8	5.6	2.6	chr19	42325733	42325768	(16291848)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1875034
17	13.4	2.9	0.0	chr19	44891217	44891250	(13726366)	+	(GGC)n	Simple_repeat	1	35	(0)	1879899
195	25.3	6.2	5.2	chr19	45424059	45424154	(13193462)	C	L2b	LINE/L2	(9)	3366	3270	1881263
13422	9.1	10.2	0.7	chr19	46049333	46051263	(12566353)	+	L1PBa	LINE/L1	635	2736	(4127)	1882892
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
15	14.4	2.4	4.7	chr19	47608664	47608705	(11008911)	+	G-rich	Low_complexity	1	43	(0)	1886567
22	13.0	0.0	4.3	chr19	47608826	47608871	(11008745)	+	GA-rich	Low_complexity	1	46	(0)	1886568
16	0.0	0.0	0.0	chr19	47608894	47608910	(11008706)	+	(T)n	Simple_repeat	1	17	(0)	1886569
944	23.6	14.2	7.7	chr19	47892220	47892697	(10724919)	+	LTR27D	LTR/ERV1	147	781	(63)	1887341
326	28.0	7.7	4.0	chr19	48007129	48007303	(10610313)	C	MIRc	SINE/MIR	(26)	242	61	1887685
5707	26.1	3.0	2.5	chr19	48085554	48087653	(10529963)	+	L1PBb	LINE/L1	56	1697	(5219)	1887906
14	16.9	2.3	4.4	chr19	48714440	48714483	(9903133)	+	(CGCGG)n	Simple_repeat	1	45	(0)	1889450
14	18.9	4.5	2.2	chr19	48993563	48993606	(9624010)	+	GA-rich	Low_complexity	1	46	(0)	1890139
13	17.2	3.9	5.7	chr19	49119142	49119192	(9498424)	+	(TCCCGCC)n	Simple_repeat	1	53	(0)	1890418
1844	13.7	0.0	2.4	chr19	49744597	49744889	(8872727)	C	AluJr4	SINE/Alu	(26)	286	1	1891840
17	27.6	1.9	0.0	chr19	49802408	49802461	(8815155)	+	(CTCC)n	Simple_repeat	1	55	(0)	1891978
2449	7.7	0.0	0.3	chr19	49817642	49817951	(8799665)	+	AluSx1	SINE/Alu	1	309	(3)	1892010
308	30.1	7.1	1.3	chr19	49881550	49881707	(8735909)	C	MLT1K	LTR/ERVL-MaLR	(29)	566	399	1892125
561	24.9	10.6	0.0	chr19	49881725	49881893	(8735723)	C	MLT1K	LTR/ERVL-MaLR	(276)	319	131	1892125
1968	14.3	11.4	6.4	chr19	49946463	49946802	(8670814)	C	MER51E	LTR/ERV1	(101)	381	1	1892267
394	23.3	1.9	3.7	chr19	49946803	49946909	(8670707)	+	L1MA9	LINE/L1	5945	6049	(263)	1892266
13	22.7	4.3	0.0	chr19	50203332	50203377	(8414239)	+	(CCTCGCG)n	Simple_repeat	1	48	(0)	1892963
18	17.7	2.1	4.0	chr19	50658137	50658185	(7959431)	+	G-rich	Low_complexity	1	48	(0)	1894034
15	4.5	0.0	4.0	chr19	54137502	54137526	(4480090)	+	(GGA)n	Simple_repeat	1	25	(0)	1901171
1874	12.7	2.0	2.3	chr19	54200327	54200626	(4416990)	+	AluJb	SINE/Alu	1	299	(13)	1901299
223	33.1	10.8	0.0	chr19	55063369	55063525	(3554091)	+	MIRb	SINE/MIR	36	211	(57)	1902919
16	21.6	0.0	0.0	chr19	55166913	55166944	(3450672)	+	(T)n	Simple_repeat	1	32	(0)	1903140
13	20.0	2.0	5.8	chr19	55461724	55461774	(3155842)	+	(CTCTGC)n	Simple_repeat	1	52	(0)	1903780
363	32.0	8.6	3.4	chr19	55585654	55585918	(3031698)	C	L2	LINE/L2	(453)	2966	2687	1904094
765	30.9	12.0	3.2	chr19	55586020	55586459	(3031157)	+	L2a	LINE/L2	2729	3219	(207)	1904095
2034	12.8	0.6	5.8	chr19	55638707	55639035	(2978581)	+	AluSx	SINE/Alu	1	312	(0)	1904212
2264	16.8	3.8	5.3	chr19	55639036	55639068	(2978548)	C	MSTB	LTR/ERVL-MaLR	(393)	33	2	1904210
987	17.5	0.5	2.1	chr19	55639114	55639306	(2978310)	+	MER20	DNA/hAT-Charlie	1	190	(29)	1904213
979	17.0	0.0	0.0	chr19	55639307	55639453	(2978163)	+	AluJb	SINE/Alu	142	288	(24)	1904214
26	0.0	0.0	0.0	chr19	57363364	57363388	(1254228)	+	(TGCG)n	Simple_repeat	1	25	(0)	1907684
44	3.1	2.7	5.3	chr19	57487527	57487600	(1130016)	+	(ATCTCC)n	Simple_repeat	1	76	(0)	1907880
187	14.4	7.0	0.4	chr19	57499312	57499737	(1117879)	+	(CTCCAT)n	Simple_repeat	1	456	(0)	1907898
910	15.5	4.5	0.0	chr19	57815132	57815279	(802337)	+	FRAM	SINE/Alu	6	160	(16)	1908374
2060	6.1	3.6	3.2	chr19	57819208	57819513	(798103)	C	AluY	SINE/Alu	(0)	311	1	1908382
2441	6.8	0.0	3.4	chr19	57916811	57917132	(700484)	+	AluYm1	SINE/Alu	1	311	(0)	1908540
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
253	33.3	4.1	0.0	chr19	58381392	58381508	(236108)	+	MER5B	DNA/hAT-Charlie	30	151	(27)	1909440
13	16.6	2.2	6.4	chr2	9004038	9004083	(233189446)	+	G-rich	Low_complexity	1	47	(0)	1922160
465	30.2	0.8	1.5	chr2	9647636	9647766	(232545763)	C	MIRc	SINE/MIR	(120)	148	19	1923354
17	20.2	6.1	2.9	chr2	10812723	10812788	(231380741)	+	(CCG)n	Simple_repeat	1	70	(0)	1925522
17	18.8	1.9	3.8	chr2	14632511	14632562	(227560967)	+	G-rich	Low_complexity	1	53	(0)	1931489
24	25.9	1.1	4.2	chr2	17518545	17518585	(224674944)	+	(GCCCC)n	Simple_repeat	1	93	(0)	1936068
15	24.0	2.0	1.9	chr2	17518586	17518636	(224674893)	+	(CCCT)n	Simple_repeat	1	52	(0)	1936069
276	35.5	0.8	3.2	chr2	24881373	24881497	(217312032)	C	L2c	LINE/L2	(227)	3160	3039	1946866
1048	18.7	1.8	1.8	chr2	24881762	24881979	(217311550)	+	MER20	DNA/hAT-Charlie	2	219	(0)	1946867
16	22.3	4.0	5.1	chr2	27071773	27071847	(215121682)	+	(GGCTGG)n	Simple_repeat	1	78	(0)	1951130
191	32.5	6.7	0.0	chr2	36967429	36967511	(205226018)	C	L2c	LINE/L2	(5)	3382	3294	1966854
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
18	11.9	3.9	5.7	chr2	64751033	64751083	(177442446)	+	(GGAGC)n	Simple_repeat	1	53	(0)	2009877
13	24.2	3.6	1.8	chr2	64751221	64751275	(177442254)	+	(GTGGAGG)n	Simple_repeat	1	57	(0)	2009878
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
24	17.1	4.3	2.8	chr2	70994826	70994894	(171198635)	+	(GCC)n	Simple_repeat	1	72	(0)	2019949
13	26.3	0.0	0.0	chr2	74654267	74654307	(167539222)	+	(GCCGA)n	Simple_repeat	1	41	(0)	2025740
263	27.7	12.7	1.4	chr2	79832884	79833022	(162360507)	+	Tigger19a	DNA/TcMar-Tigger	45	201	(122)	2032838
2636	5.2	0.0	0.3	chr2	85185961	85186266	(157007263)	C	AluY	SINE/Alu	(6)	305	1	2040273
3654	11.5	8.2	0.7	chr2	88024355	88024949	(154168580)	C	LTR9B	LTR/ERV1	(0)	644	1	2045149
25	3.5	0.0	0.0	chr2	121649464	121649493	(120544036)	+	(A)n	Simple_repeat	1	30	(0)	2089035
777	29.3	8.0	3.6	chr2	126864167	126864892	(115328637)	+	L1ME3D	LINE/L1	5429	6236	(6)	2096533
483	28.7	5.7	1.2	chr2	126865180	126865348	(115328181)	C	MIRb	SINE/MIR	(91)	177	1	2096534
32	12.1	5.6	5.3	chr2	127885927	127886016	(114307513)	+	(GGC)n	Simple_repeat	1	95	(0)	2098184
14	24.6	5.1	1.6	chr2	128027166	128027224	(114166305)	+	(CGG)n	Simple_repeat	1	62	(0)	2098507
13	13.0	0.0	3.6	chr2	152717632	152717659	(89475870)	+	GA-rich	Low_complexity	1	28	(0)	2132825
14	30.3	3.8	2.4	chr2	167293036	167293115	(74900414)	+	(TGC)n	Simple_repeat	1	83	(0)	2152028
23	21.9	1.7	0.0	chr2	167293086	167293143	(74900386)	+	(CGC)n	Simple_repeat	1	59	(0)	2152029
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
17241	20.9	2.7	1.5	chr2	188389623	188397236	(53796293)	C	L1PB3	LINE/L1	(7)	6863	3	2181605
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
54	0.0	0.0	0.0	chr2	190880873	190880920	(51312609)	+	(GCA)n	Simple_repeat	1	48	(0)	2185068
21	27.9	4.1	0.0	chr2	192001344	192001416	(50192113)	+	(TA)n	Simple_repeat	1	76	(0)	2186692
13	0.0	0.0	0.0	chr2	197804607	197804623	(44388906)	+	(GCC)n	Simple_repeat	1	17	(0)	2194616
326	30.6	1.6	3.9	chr2	200578760	200578888	(41614641)	C	L1M3	LINE/L1	(1382)	4764	4639	2198529
1160	19.4	2.3	0.0	chr2	200578909	200579119	(41614410)	C	MER20	DNA/hAT-Charlie	(3)	216	1	2198530
1304	28.9	5.7	5.7	chr2	200579125	200580494	(41613035)	C	L1M3	LINE/L1	(1730)	4416	3081	2198529
12	4.2	0.0	10.0	chr2	200963841	200963870	(41229659)	+	(CCTTT)n	Simple_repeat	1	30	(0)	2199238
34	6.5	0.0	0.0	chr2	202033744	202033808	(40159721)	+	(GGGAG)n	Simple_repeat	1	65	(0)	2201078
18	14.3	0.0	2.9	chr2	202634738	202634771	(39558758)	+	(AC)n	Simple_repeat	1	34	(0)	2202410
19	4.0	0.0	0.0	chr2	202634995	202635020	(39558509)	+	(GCG)n	Simple_repeat	1	26	(0)	2202411
15	27.2	0.0	0.0	chr2	207166071	207166112	(35027417)	+	(TCC)n	Simple_repeat	1	42	(0)	2209619
3550	9.3	6.6	10.4	chr2	208358824	208359484	(33834045)	C	MER51A	LTR/ERV1	(0)	634	1	2211746
17	22.7	0.0	0.0	chr2	226801377	226801417	(15392112)	+	GA-rich	Low_complexity	1	41	(0)	2239469
443	25.7	13.3	2.4	chr2	227471725	227471931	(14721598)	C	L2a	LINE/L2	(357)	3062	2830	2240575
215	18.6	18.1	0.0	chr2	227471934	227471992	(14721537)	+	MIR	SINE/MIR	191	262	(0)	2240574
13	5.3	0.0	0.0	chr2	227472177	227472196	(14721333)	+	(GGC)n	Simple_repeat	1	20	(0)	2240577
18	8.5	0.0	0.0	chr2	231056469	231056493	(11137036)	+	(A)n	Simple_repeat	1	25	(0)	2246156
12	22.0	4.8	0.0	chr2	231056825	231056866	(11136663)	+	G-rich	Low_complexity	1	44	(0)	2246157
22	17.3	0.0	2.1	chr2	231708583	231708630	(10484899)	+	(CGC)n	Simple_repeat	1	48	(0)	2247479
895	28.8	6.9	2.7	chr2	237122287	237122660	(5070869)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	19	2255975
12	13.7	6.2	0.0	chr2	238288810	238288841	(3904688)	+	(CGCCCG)n	Simple_repeat	1	34	(0)	2257599
13	18.3	2.6	2.5	chr2	239401180	239401218	(2792311)	+	(CCCG)n	Simple_repeat	1	40	(0)	2258868
13	23.8	1.9	3.7	chr20	310383	310435	(64133732)	+	(CCCAGCC)n	Simple_repeat	1	54	(0)	2262619
16	0.0	0.0	0.0	chr20	310720	310736	(64133431)	+	(T)n	Simple_repeat	1	17	(0)	2262620
209	26.2	0.5	2.6	chr20	610580	610679	(63833488)	+	MIR3	SINE/MIR	48	145	(123)	2263316
306	23.1	13.8	8.2	chr20	610734	610903	(63833264)	C	MER5A	DNA/hAT-Charlie	(2)	187	7	2263317
779	16.8	15.1	2.4	chr20	6140986	6141192	(58302975)	C	MLT1K	LTR/ERVL-MaLR	(23)	572	335	2273955
344	23.4	19.0	9.6	chr20	6141258	6141413	(58302754)	C	MLT1K	LTR/ERVL-MaLR	(421)	174	1	2273955
22	21.3	6.6	0.0	chr20	13995559	13995634	(50448533)	+	(GGCGAGC)n	Simple_repeat	1	81	(0)	2285791
25	21.0	0.0	4.2	chr20	17682473	17682543	(46761624)	+	G-rich	Low_complexity	1	71	(0)	2291262
533	30.7	13.8	3.5	chr20	19265544	19266050	(45178117)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	29	2293875
14	23.5	4.3	4.1	chr20	33686518	33686587	(30757580)	+	(GCGGC)n	Simple_repeat	1	73	(0)	2311337
2151	9.9	0.7	1.3	chr20	34515892	34516194	(29927973)	C	AluJo	SINE/Alu	(11)	301	1	2313239
16	0.0	4.3	0.0	chr20	35284937	35284959	(29159208)	+	(TTCA)n	Simple_repeat	1	24	(0)	2314939
2255	10.7	10.8	8.3	chr20	35539745	35540213	(28903954)	+	MER51E	LTR/ERV1	1	482	(0)	2315517
12	21.9	2.2	4.3	chr20	35772191	35772236	(28671931)	+	(CCCGG)n	Simple_repeat	1	47	(0)	2316010
14	21.0	3.9	1.9	chr20	35772336	35772386	(28671781)	+	G-rich	Low_complexity	1	53	(0)	2316011
6288	12.0	14.2	0.9	chr20	36676803	36677908	(27766259)	+	MER52C	LTR/ERV1	1	1278	(0)	2318177
662	26.5	5.9	2.6	chr20	40159842	40160151	(24284016)	+	L1ME4c	LINE/L1	394	714	(116)	2325292
3389	9.3	15.1	8.0	chr20	41574788	41575372	(22868795)	+	MER51A	LTR/ERV1	1	634	(0)	2327735
1267	23.2	5.8	0.3	chr20	43444937	43445160	(20999007)	+	Tigger3a	DNA/TcMar-Tigger	110	348	(0)	2331175
18	22.7	3.8	1.8	chr20	45935194	45935246	(18508921)	+	(GC)n	Simple_repeat	1	55	(0)	2336593
1023	16.2	1.9	1.2	chr20	49207078	49207237	(15236930)	+	FRAM	SINE/Alu	1	161	(15)	2343836
374	29.3	8.4	9.7	chr20	49207274	49207506	(15236661)	+	LTR78	LTR/ERV1	832	1062	(242)	2343837
2118	12.8	0.0	1.6	chr20	49207507	49207818	(15236349)	C	AluSx3	SINE/Alu	(3)	308	2	2343838
12	14.1	3.0	2.9	chr20	49812818	49812850	(14631317)	+	(CCCG)n	Simple_repeat	1	34	(0)	2345409
374	24.2	21.5	5.8	chr20	57718236	57718441	(6725726)	+	L1ME4a	LINE/L1	5855	6101	(23)	2361639
1251	13.4	0.9	1.4	chr20	61959364	61959712	(2484455)	+	MER51E	LTR/ERV1	1	382	(100)	2367947
14	18.0	2.5	2.4	chr20	63835223	63835262	(608905)	+	(AGGCAG)n	Simple_repeat	1	41	(0)	2370107
333	37.2	1.9	5.5	chr21	29164508	29164672	(17545311)	+	LFSINE_Vert	SINE/tRNA	270	428	(31)	2397865
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
10138	13.0	3.1	1.5	chr21	41588974	41589896	(5120087)	C	L1PBa	LINE/L1	(5169)	1694	621	2417689
2238	14.1	5.3	1.3	chr21	42463789	42464169	(4245814)	C	MER57B1	LTR/ERV1	(4)	397	1	2418911
16	24.7	2.8	4.0	chr21	42974392	42974463	(3735520)	+	(CCCGCC)n	Simple_repeat	1	74	(0)	2419663
32	23.9	1.2	1.1	chr21	42974686	42974771	(3735212)	+	(CCG)n	Simple_repeat	1	87	(0)	2419664
507	22.9	7.3	0.0	chr21	45270270	45270409	(1439574)	+	L1PB1	LINE/L1	54	204	(6659)	2422697
18412	11.2	5.0	0.7	chr21	45270401	45275891	(1434092)	+	L1PB1	LINE/L1	1113	6867	(0)	2422697
2174	10.2	0.0	0.0	chr22	18001916	18002220	(32816248)	+	AluSz	SINE/Alu	1	305	(7)	2430020
14	18.7	2.2	4.3	chr22	20117136	20117181	(30701287)	+	(CCGC)n	Simple_repeat	1	47	(0)	2432924
36	9.8	4.8	4.5	chr22	23070313	23070399	(27748069)	+	(GCGG)n	Simple_repeat	1	87	(0)	2437726
15	19.3	0.0	4.4	chr22	23751116	23751160	(27067308)	+	(GCCCCCG)n	Simple_repeat	1	45	(0)	2438892
928	24.7	11.9	6.7	chr22	25540755	25541188	(25277280)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	82	2442446
242	25.1	9.8	1.5	chr22	29553838	29553941	(21264527)	+	L2a	LINE/L2	3260	3423	(3)	2450826
1460	20.1	5.8	1.7	chr22	35399548	35399846	(15418622)	+	AluJb	SINE/Alu	1	312	(0)	2462903
14	15.9	0.0	0.0	chr22	36776112	36776139	(14042329)	+	(CCT)n	Simple_repeat	1	28	(0)	2465819
238	31.7	7.5	10.1	chr22	37186190	37186368	(13632100)	C	MER91A	DNA/hAT-Tip100	(5)	191	18	2466688
304	31.1	2.9	5.4	chr22	37601432	37601623	(13216845)	+	L2a	LINE/L2	3196	3414	(12)	2467634
16	0.0	0.0	0.0	chr22	37746216	37746232	(13072236)	+	(A)n	Simple_repeat	1	17	(0)	2467968
27	8.9	1.9	3.8	chr22	37746284	37746335	(13072133)	+	(CGG)n	Simple_repeat	1	53	(0)	2467969
2280	3.7	5.5	0.0	chr22	37844596	37844867	(12973601)	C	AluSc	SINE/Alu	(21)	288	1	2468202
1310	15.8	4.0	0.0	chr22	39183766	39183980	(11634488)	C	AluJb	SINE/Alu	(0)	312	89	2471070
362	27.0	6.7	0.8	chr22	39184070	39184196	(11634272)	C	MLT1K	LTR/ERVL-MaLR	(343)	252	118	2471071
13	14.7	3.3	0.0	chr22	39520440	39520469	(11297999)	+	G-rich	Low_complexity	1	31	(0)	2471815
979	15.8	18.1	0.3	chr22	39533082	39533367	(11285101)	+	Charlie1	DNA/hAT-Charlie	2393	2740	(41)	2471834
3015	10.5	8.9	0.7	chr22	39724419	39724859	(11093609)	+	MER51E	LTR/ERV1	2	482	(0)	2472221
192	29.3	3.3	0.0	chr3	3179960	3180017	(195115542)	C	MIR3	SINE/MIR	(37)	171	112	2497028
2191	11.2	0.3	0.0	chr3	9648896	9649190	(188646369)	C	AluSz	SINE/Alu	(15)	297	2	2507671
16	27.6	3.0	1.4	chr3	9649441	9649507	(188646052)	+	(GGCGGA)n	Simple_repeat	1	69	(0)	2507672
25	19.6	2.8	7.3	chr3	14948527	14948633	(183346926)	+	G-rich	Low_complexity	1	110	(0)	2517906
2270	12.2	7.3	8.6	chr3	30750999	30751484	(167544075)	+	MER51E	LTR/ERV1	1	479	(3)	2541027
13	30.4	0.0	1.7	chr3	40476999	40477020	(157818539)	+	A-rich	Low_complexity	36	57	(0)	2556066
11	15.3	2.4	7.0	chr3	42502630	42502671	(155792888)	+	(CAGCGC)n	Simple_repeat	1	43	(0)	2559219
13	28.4	2.2	6.5	chr3	44477552	44477642	(153817917)	+	(GCC)n	Simple_repeat	1	93	(0)	2562165
16	16.8	1.9	5.7	chr3	44510513	44510564	(153784995)	+	(CGCCCCG)n	Simple_repeat	1	53	(0)	2562222
57	0.0	0.0	0.0	chr3	44510727	44510777	(153784782)	+	(GGCGGCG)n	Simple_repeat	1	51	(0)	2562223
277	18.9	20.8	2.1	chr3	52771182	52771278	(145524281)	C	L2c	LINE/L2	(1)	3386	3267	2576441
36	25.1	0.0	1.0	chr3	84958994	84959090	(113336469)	+	(GCCGCC)n	Simple_repeat	1	97	(0)	2626424
23	22.5	4.5	3.3	chr3	88058915	88059002	(110236557)	+	(CCG)n	Simple_repeat	1	92	(0)	2630311
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
14937	10.5	10.8	2.6	chr3	98612319	98613944	(99681615)	C	L1PBa	LINE/L1	(5059)	1804	3	2639166
2478	7.0	0.0	0.7	chr3	101561335	101561645	(96733914)	C	AluSz	SINE/Alu	(0)	312	1	2643181
21	3.3	0.0	3.0	chr3	105869047	105869079	(92426480)	+	(CGGGG)n	Simple_repeat	1	33	(0)	2648801
18	23.9	0.0	2.2	chr3	107522822	107522867	(90772692)	+	(TG)n	Simple_repeat	1	46	(0)	2651000
13	26.9	1.8	3.5	chr3	115147777	115147833	(83147726)	+	(CTC)n	Simple_repeat	1	58	(0)	2661720
204	34.1	10.8	0.0	chr3	119677683	119677773	(78617786)	C	MIR1_Amn	SINE/MIR	(97)	133	32	2668000
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
8665	15.9	3.9	3.0	chr3	131046712	131048814	(67246745)	C	L1PBa	LINE/L1	(4497)	2366	258	2686333
354	28.8	7.5	2.0	chr3	141737830	141738029	(56557530)	C	L2a	LINE/L2	(0)	3426	3165	2702770
3026	17.5	6.9	1.6	chr3	142866707	142867333	(55428226)	+	LTR9C	LTR/ERV1	4	666	(0)	2704817
1450	21.0	14.0	3.3	chr3	142867334	142867832	(55427727)	+	L1M5	LINE/L1	5053	5613	(551)	2704815
13	22.3	0.0	8.2	chr3	143119664	143119724	(55175835)	+	G-rich	Low_complexity	1	61	(0)	2705218
20005	12.9	2.5	3.9	chr3	177638595	177641040	(20654519)	C	L1PB1	LINE/L1	(360)	3198	625	2753583
17	11.2	4.9	2.3	chr3	181757291	181757331	(16538228)	+	(GTTTTA)n	Simple_repeat	1	43	(0)	2759803
865	18.2	26.1	5.7	chr3	183115869	183116225	(15179334)	C	MER51E	LTR/ERV1	(25)	615	42	2762118
446	34.1	5.9	1.5	chr3	183544814	183545087	(14750472)	+	MLT1K	LTR/ERVL-MaLR	145	431	(164)	2762876
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
56	2.0	0.0	0.0	chr3	185362931	185362982	(12932577)	+	(AC)n	Simple_repeat	1	52	(0)	2766252
17	19.1	3.5	3.4	chr3	186109117	186109173	(12186386)	+	(CGCGGCC)n	Simple_repeat	1	59	(0)	2767731
19	25.1	2.2	5.5	chr3	186567280	186567368	(11728191)	+	(CGC)n	Simple_repeat	1	91	(0)	2768577
503	28.6	10.0	2.1	chr3	186567636	186567874	(11727685)	C	MIRb	SINE/MIR	(2)	266	7	2768578
350	23.9	3.9	2.7	chr3	189340862	189340992	(8954567)	+	MIR3	SINE/MIR	44	177	(31)	2773403
2132	9.9	3.3	0.3	chr4	124019	124310	(190090245)	+	AluSx1	SINE/Alu	1	301	(11)	2788668
15	28.6	1.6	1.6	chr4	2262201	2262261	(187952294)	+	G-rich	Low_complexity	1	62	(0)	2791327
18	20.3	3.9	0.0	chr4	3074605	3074655	(187139900)	+	(GCCGCC)n	Simple_repeat	1	53	(0)	2792718
20	3.1	6.1	0.0	chr4	6200656	6200689	(184013866)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	2797929
807	26.8	5.3	9.8	chr4	41339953	41340267	(148874288)	C	MER102b	DNA/hAT-Charlie	(41)	300	1	2853890
16	26.4	1.8	1.8	chr4	42152271	42152326	(148062229)	+	(GCC)n	Simple_repeat	1	57	(0)	2855150
1025	24.2	10.3	0.9	chr4	77673646	77673970	(112540585)	+	L1MC5a	LINE/L1	2338	2696	(81)	2900994
2415	9.6	0.3	0.0	chr4	77674072	77674374	(112540181)	C	AluSp	SINE/Alu	(9)	304	1	2900995
15	22.1	0.0	2.3	chr4	110623140	110623183	(79591372)	+	(CTCCGC)n	Simple_repeat	1	44	(0)	2946875
9732	15.3	3.6	1.8	chr4	117447333	117448617	(72765938)	C	L1MA4A	LINE/L1	(4774)	2089	811	2955691
26	11.8	0.0	0.0	chr4	125314687	125314724	(64899831)	+	(A)n	Simple_repeat	1	38	(0)	2966464
3120	9.6	7.3	7.5	chr4	140764815	140765297	(49449258)	+	MER51E	LTR/ERV1	1	482	(0)	2986741
233	31.4	18.4	2.5	chr4	145909266	145909624	(44304931)	C	MLT1K	LTR/ERVL-MaLR	(8)	587	159	2993559
467	28.4	6.6	3.6	chr4	155377197	155377415	(34837140)	+	MIR	SINE/MIR	1	226	(36)	3007308
13	18.9	2.8	0.0	chr4	174283346	174283381	(15931174)	+	A-rich	Low_complexity	1	37	(0)	3032746
1382	24.7	8.3	2.1	chr4	175862153	175862635	(14351920)	C	L1ME3A	LINE/L1	(8)	6165	5650	3034750
3034	8.9	2.5	7.3	chr4	187770327	187770822	(2443733)	C	MER4A1	LTR/ERV1	(0)	472	1	3051450
375	25.1	2.4	6.3	chr5	6780713	6780855	(174757404)	C	L1M5	LINE/L1	(369)	5785	5648	3062299
816	20.4	2.8	8.0	chr5	6780860	6781083	(174757176)	C	MER20	DNA/hAT-Charlie	(7)	212	1	3062300
2012	15.2	0.3	1.0	chr5	6781125	6781434	(174756825)	C	AluJr	SINE/Alu	(4)	308	1	3062301
1097	9.0	2.7	0.0	chr5	21459162	21459305	(160078954)	+	AluSx1	SINE/Alu	149	296	(16)	3082013
1136	9.2	9.4	0.0	chr5	37378943	37379106	(144159153)	+	AluSx	SINE/Alu	121	301	(11)	3104396
12	16.3	5.4	9.0	chr5	41904484	41904557	(139633702)	+	G-rich	Low_complexity	1	78	(0)	3110987
13	17.0	3.0	0.0	chr5	66144345	66144377	(115393882)	+	G-rich	Low_complexity	1	34	(0)	3139018
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
484	26.4	6.3	10.4	chr5	80188945	80189184	(101349075)	C	L1ME3G	LINE/L1	(387)	537	312	3161021
206	23.8	13.1	3.6	chr5	81301405	81301487	(100236772)	+	L2b	LINE/L2	3239	3330	(45)	3162953
12	11.5	3.3	3.2	chr5	83077664	83077693	(98460566)	+	(TTCT)n	Simple_repeat	1	31	(0)	3165476
18	11.6	0.0	0.0	chr5	88484256	88484283	(93053976)	+	(AC)n	Simple_repeat	1	28	(0)	3172403
1103	15.8	10.1	0.0	chr5	94397592	94397787	(87140472)	C	MER20	DNA/hAT-Charlie	(0)	219	2	3179770
13	29.5	0.0	2.0	chr5	109409882	109409932	(72128327)	+	(CCT)n	Simple_repeat	1	51	(0)	3198947
28	7.5	0.0	2.3	chr5	109409942	109409985	(72128274)	+	(GCG)n	Simple_repeat	1	44	(0)	3198948
881	12.2	0.7	1.9	chr5	117454579	117454728	(64083531)	+	THE1B	LTR/ERVL-MaLR	1	156	(301)	3209628
3299	29.5	3.9	5.7	chr5	117454729	117456383	(64081876)	C	L1PA17	LINE/L1	(5416)	1733	283	3209629
1955	10.4	10.6	0.4	chr5	126056908	126057187	(55481072)	+	AluSx	SINE/Alu	1	312	(0)	3220730
3383	11.5	11.0	1.0	chr5	126057188	126057664	(55480595)	C	LTR9C	LTR/ERV1	(138)	528	2	3220729
197	30.6	5.5	6.8	chr5	135042574	135042720	(46495539)	+	L2a	LINE/L2	3221	3365	(61)	3233807
973	18.0	0.0	1.6	chr5	143448610	143448801	(38089458)	+	MER20	DNA/hAT-Charlie	1	189	(30)	3247681
1733	29.3	4.2	2.0	chr5	146394896	146395455	(35142804)	+	LTR78	LTR/ERV1	242	814	(490)	3252499
291	30.8	12.7	0.0	chr5	146395595	146395711	(35142548)	+	LTR78	LTR/ERV1	1162	1295	(9)	3252499
245	26.4	18.9	1.2	chr5	149357557	149357717	(32180542)	C	MIRc	SINE/MIR	(27)	241	46	3257560
17	25.0	4.3	5.1	chr5	149358053	149358146	(32180113)	+	(CCG)n	Simple_repeat	1	98	(0)	3257561
501	14.1	7.6	0.0	chr5	150450124	150450208	(31088051)	+	FLAM_A	SINE/Alu	10	101	(41)	3259966
29	5.7	0.0	0.0	chr5	154858705	154858741	(26679518)	+	(CAGCCCGC)n	Simple_repeat	1	37	(0)	3268203
13	16.9	0.0	8.5	chr5	157731251	157731297	(23806962)	+	GA-rich	Low_complexity	1	47	(0)	3273268
579	27.6	6.4	3.9	chr5	172420808	172421067	(9117192)	+	MLT1K	LTR/ERVL-MaLR	325	591	(4)	3297392
2665	2.7	0.0	0.0	chr5	172958945	172959238	(8579021)	+	AluY	SINE/Alu	5	298	(13)	3298606
510	31.4	10.0	7.6	chr5	176787715	176788280	(4749979)	+	MLT1K	LTR/ERVL-MaLR	7	587	(8)	3305993
227	29.4	12.9	7.7	chr5	177607799	177608111	(3930148)	C	MLT1K	LTR/ERVL-MaLR	(139)	456	125	3307722
13	8.5	4.0	0.0	chr5	180292053	180292077	(1246182)	+	(CCG)n	Simple_repeat	1	26	(0)	3312365
15	20.0	0.0	5.9	chr5	180292171	180292221	(1246038)	+	G-rich	Low_complexity	1	51	(0)	3312366
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
45	32.8	2.4	0.0	chr6	3496475	3496644	(167309335)	+	(TCTC)n	Simple_repeat	1	174	(0)	3318990
41	30.2	3.0	3.4	chr6	3496645	3496662	(167309317)	+	(TTCC)n	Simple_repeat	65	204	(0)	3318989
933	20.5	1.3	8.8	chr6	4180646	4180896	(166625083)	C	MER101	LTR/ERV1	(111)	363	132	3320079
8231	11.1	5.8	3.3	chr6	4842265	4844381	(165961598)	C	L1PB1	LINE/L1	(3493)	3369	1193	3321128
17	0.0	0.0	0.0	chr6	10694904	10694922	(160111057)	+	(T)n	Simple_repeat	1	19	(0)	3330013
3204	12.3	6.5	5.1	chr6	11804746	11805336	(159000643)	+	MER4A1_	LTR/ERV1	1	600	(0)	3331756
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
2009	12.2	0.7	1.6	chr6	26198329	26198631	(144607348)	C	AluSg	SINE/Alu	(10)	300	1	3354813
410	28.1	0.8	1.5	chr6	28225034	28225163	(142580816)	+	Charlie13a	DNA/hAT-Charlie	1376	1504	(10)	3358288
23	10.2	2.4	0.0	chr6	28266946	28266995	(142538984)	+	(AAAACA)n	Simple_repeat	1	51	(0)	3358357
12	19.9	2.3	4.4	chr6	28267225	28267268	(142538711)	+	G-rich	Low_complexity	1	45	(0)	3358358
397	31.8	4.4	5.2	chr6	28349524	28349795	(142456184)	C	L1ME4b	LINE/L1	(3)	889	620	3358487
495	14.9	4.1	1.1	chr6	28443672	28443766	(142362213)	C	MIR	SINE/MIR	(51)	211	114	3358625
461	14.5	0.0	2.4	chr6	28985714	28985796	(141820183)	+	AluJo	SINE/Alu	45	125	(187)	3359581
13	12.3	0.0	6.8	chr6	31180937	31180951	(139625028)	+	(GAGTTT)n	Simple_repeat	1	14	(0)	3362963
2427	4.7	0.0	2.0	chr6	31180952	31181248	(139624731)	+	AluY	SINE/Alu	1	291	(20)	3362964
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
14	25.2	2.1	0.0	chr6	32130213	32130259	(138675720)	+	G-rich	Low_complexity	1	48	(0)	3364426
1759	7.5	0.0	3.1	chr6	32130508	32130735	(138675244)	+	AluSx	SINE/Alu	92	312	(0)	3364427
20	19.0	3.6	1.7	chr6	33454843	33454898	(137351081)	+	(TGT)n	Simple_repeat	1	58	(0)	3366470
4728	13.3	2.8	2.3	chr6	36244792	36245537	(134560442)	C	LTR39	LTR/ERV1	(10)	773	24	3372063
381	26.3	10.7	3.0	chr6	36875202	36875401	(133930578)	C	MIRc	SINE/MIR	(3)	259	40	3373482
1070	24.7	12.2	5.2	chr6	40743062	40743522	(130062457)	C	LTR33A	LTR/ERVL	(2)	518	21	3380019
13	18.4	5.7	3.6	chr6	41780087	41780139	(129025840)	+	(GCGCGGAG)n	Simple_repeat	1	56	(0)	3381804
336	28.6	12.5	5.5	chr6	42218086	42218111	(128587868)	+	L1ME4a	LINE/L1	5949	5974	(150)	3382814
210	20.0	2.4	0.0	chr6	44203253	44203292	(126602687)	+	MIRb	SINE/MIR	30	70	(198)	3386763
967	22.4	13.6	3.6	chr6	44203319	44203734	(126602245)	C	MER4C	LTR/ERV1	(1)	464	1	3386764
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
3280	27.2	6.0	2.9	chr6	54736564	54737583	(116068396)	C	L1PA14	LINE/L1	(5577)	1116	64	3402049
5254	24.2	5.8	2.4	chr6	54992137	54995319	(115810660)	+	L1PA15-16	LINE/L1	861	3973	(2942)	3402379
1714	27.1	5.9	3.2	chr6	63598416	63598975	(107207004)	C	LTR33C	LTR/ERVL	(29)	600	25	3410846
4796	26.9	5.1	5.8	chr6	68399117	68402391	(102403588)	+	L1PA15-16	LINE/L1	13	3224	(3691)	3416629
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
334	23.7	8.2	1.5	chr6	96898100	96898236	(73907743)	C	MER5B	DNA/hAT-Charlie	(28)	150	4	3454286
14	28.4	1.8	0.0	chr6	108558401	108558455	(62247524)	+	G-rich	Low_complexity	1	56	(0)	3470834
12	16.9	2.9	2.8	chr6	111873420	111873454	(58932525)	+	(GCT)n	Simple_repeat	1	36	(0)	3476294
359	31.5	8.5	4.6	chr6	124884725	124885007	(45920972)	C	MER103C	DNA/hAT-Charlie	(0)	297	3	3493533
22	16.8	0.0	0.0	chr6	132623024	132623065	(38182914)	+	(TTCC)n	Simple_repeat	1	42	(0)	3504066
5449	23.1	4.5	6.0	chr6	137588305	137592558	(33213421)	+	L1PB4	LINE/L1	190	4342	(2573)	3511670
640	23.8	14.4	0.0	chr6	138966424	138966630	(31839349)	C	MIR	SINE/MIR	(0)	262	25	3513861
11574	10.5	1.9	3.2	chr6	143174514	143176806	(27629173)	C	L1PB1	LINE/L1	(3813)	3049	636	3519477
453	35.1	3.2	6.2	chr6	144279488	144279812	(26526167)	C	MLT1K	LTR/ERVL-MaLR	(273)	322	8	3521165
492	30.4	8.0	3.3	chr6	144279820	144280094	(26525885)	+	L2c	LINE/L2	3099	3387	(0)	3521166
21783	10.3	3.3	0.9	chr6	149186280	149190839	(21615140)	C	L1PB1	LINE/L1	(1491)	5371	688	3528030
622	13.5	2.6	3.5	chr6	151764107	151764221	(19041758)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	3532589
2704	9.2	14.3	1.0	chr6	159106745	159107161	(11698818)	+	MER51E	LTR/ERV1	1	482	(0)	3543662
1750	30.8	9.2	7.4	chr6	161606449	161608048	(9197931)	+	HAL1	LINE/L1	4	1634	(873)	3546958
378	23.0	8.1	11.3	chr6	161608133	161608362	(9197617)	+	HAL1	LINE/L1	1877	2098	(409)	3546958
18	12.2	0.0	0.0	chr6	170553455	170553481	(252498)	+	(T)n	Simple_repeat	1	27	(0)	3557578
446	25.2	6.1	1.9	chr6	170553924	170554081	(251898)	C	MIR	SINE/MIR	(22)	240	76	3557579
20	0.0	3.7	0.0	chr6	170554089	170554138	(251841)	+	(AAC)n	Simple_repeat	1	51	(0)	3557580
23	14.8	3.1	4.5	chr7	816458	816492	(158529481)	+	(CCCCTC)n	Simple_repeat	2	67	(0)	3558955
19	24.3	2.6	3.8	chr7	876805	876882	(158469091)	+	(CCCCG)n	Simple_repeat	1	80	(0)	3559024
2530	16.6	6.0	1.3	chr7	1768826	1769284	(157576689)	+	MER51E	LTR/ERV1	1	482	(0)	3560459
16	0.0	0.0	0.0	chr7	5423835	5423851	(153922122)	+	(A)n	Simple_repeat	1	17	(0)	3566997
13	18.4	7.0	0.0	chr7	5423924	5423966	(153922007)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3566998
18	25.1	1.4	5.3	chr7	5424138	5424160	(153921813)	+	(CCT)n	Simple_repeat	1	73	(0)	3566999
13	20.7	6.1	1.9	chr7	5424161	5424209	(153921764)	+	(CCCT)n	Simple_repeat	1	52	(0)	3567000
2549	12.6	4.8	8.4	chr7	6827076	6827576	(152518397)	C	MER51E	LTR/ERV1	(0)	482	1	3570257
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
3118	14.8	3.2	11.4	chr7	10972817	10973509	(148372464)	+	MER51A	LTR/ERV1	1	634	(0)	3575590
258	23.9	12.4	4.2	chr7	20173040	20173157	(139172816)	+	MER5B	DNA/hAT-Charlie	5	133	(45)	3587386
47	0.0	0.0	0.0	chr7	25856999	25857038	(133488935)	+	(AC)n	Simple_repeat	1	40	(0)	3596026
14	9.1	0.0	0.0	chr7	25857039	25857062	(133488911)	+	(GCAC)n	Simple_repeat	1	24	(0)	3596027
16	27.4	2.1	0.0	chr7	27662892	27662939	(131683034)	+	(GC)n	Simple_repeat	1	49	(0)	3598812
307	24.1	12.7	2.7	chr7	28406190	28406338	(130939635)	C	MamRep38	DNA/hAT	(9)	286	121	3600018
771	16.1	6.4	1.2	chr7	32846593	32846756	(126499217)	C	MER5A	DNA/hAT-Charlie	(16)	173	1	3606857
826	22.6	2.9	0.0	chr7	33836632	33836851	(125509122)	+	MER58A	DNA/hAT-Charlie	49	341	(0)	3608469
1855	8.7	0.0	0.0	chr7	64902739	64902979	(94442994)	C	MER4A1	LTR/ERV1	(231)	241	1	3646910
17	4.9	0.0	0.0	chr7	66628734	66628754	(92717219)	+	(C)n	Simple_repeat	1	21	(0)	3650448
540	22.4	11.3	1.5	chr7	66996351	66996554	(92349419)	C	L1MC5a	LINE/L1	(154)	2623	2371	3651289
249	26.8	0.0	0.0	chr7	72430619	72430674	(86915299)	+	MamRep1894	DNA/hAT	17	72	(51)	3662299
634	30.3	5.0	0.5	chr7	72430740	72430951	(86915022)	+	L4_A_Mam	LINE/RTE-X	4140	4361	(629)	3662281
749	23.2	15.0	6.5	chr7	72828500	72828723	(86517250)	+	L1MC5a	LINE/L1	2371	2625	(152)	3663155
189	30.8	7.1	0.0	chr7	73683366	73683430	(85662543)	+	MamRTE1	LINE/RTE-BovB	857	926	(2886)	3665233
3674	16.2	3.6	4.8	chr7	73792577	73793151	(85552822)	C	MER21C	LTR/ERVL	(367)	571	1	3665488
18	19.4	0.0	6.7	chr7	75739213	75739272	(83606701)	+	(GGCGG)n	Simple_repeat	1	60	(0)	3670391
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
2549	12.2	6.4	7.6	chr7	97973176	97973663	(61372310)	C	MER51E	LTR/ERV1	(0)	482	1	3701572
289	31.7	2.1	2.8	chr7	98560175	98560317	(60785656)	+	MLT1K	LTR/ERVL-MaLR	203	344	(251)	3702882
199	27.9	5.5	0.0	chr7	98780915	98780982	(60564991)	C	MER5B	DNA/hAT-Charlie	(102)	76	5	3703386
257	22.8	5.9	14.8	chr7	98781111	98781259	(60564714)	C	MLT1K	LTR/ERVL-MaLR	(396)	199	65	3703387
218	25.0	14.0	4.8	chr7	101252159	101252242	(58093731)	+	L2c	LINE/L2	3294	3386	(1)	3708330
23	14.7	0.0	0.0	chr7	102572730	102572767	(56773206)	+	(C)n	Simple_repeat	1	38	(0)	3711320
15	30.3	0.0	1.7	chr7	112939807	112939864	(46406109)	+	GA-rich	Low_complexity	1	58	(0)	3726481
242	25.1	1.6	3.3	chr7	117212939	117213011	(42132962)	+	MIRc	SINE/MIR	11	85	(183)	3732248
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
12	22.1	0.0	0.0	chr7	129434515	129434546	(29911427)	+	(AACGGC)n	Simple_repeat	1	32	(0)	3749137
26	0.0	0.0	0.0	chr7	134646898	134646922	(24699051)	+	(GCT)n	Simple_repeat	1	25	(0)	3757795
239	25.2	15.6	2.9	chr7	135247521	135247659	(24098314)	C	MLT1L	LTR/ERVL-MaLR	(322)	288	129	3758632
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
1105	18.9	0.5	0.5	chr7	146172230	146172421	(13173552)	+	MER20	DNA/hAT-Charlie	27	218	(1)	3775525
213	29.3	1.7	0.0	chr7	150824392	150824449	(8521524)	+	L2a	LINE/L2	3364	3422	(4)	3782512
15	14.3	0.0	6.8	chr7	157691000	157691043	(1654930)	+	(CGGCCCG)n	Simple_repeat	1	44	(0)	3792671
425	34.7	5.8	6.7	chr8	688771	689111	(144449525)	C	L4_C_Mam	LINE/RTE-X	(210)	4928	4584	3795082
18	30.2	2.1	3.1	chr8	1823735	1823828	(143314808)	+	G-rich	Low_complexity	1	96	(0)	3796153
331	35.6	1.7	0.0	chr8	23287816	23287930	(121850706)	+	MIRb	SINE/MIR	23	139	(129)	3827672
795	24.6	1.6	2.0	chr8	24248904	24249098	(120889538)	+	MER20	DNA/hAT-Charlie	1	194	(25)	3829183
13	0.0	0.0	0.0	chr8	26383168	26383184	(118755452)	+	(ACA)n	Simple_repeat	1	17	(0)	3832642
531	31.8	6.0	4.7	chr8	41105366	41105933	(104032703)	+	L1ME3Cz	LINE/L1	4945	5513	(681)	3856432
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
30	0.0	0.0	0.0	chr8	56211301	56211328	(88927308)	+	(GCC)n	Simple_repeat	1	28	(0)	3873667
13	15.2	0.0	3.2	chr8	61714631	61714661	(83423975)	+	(GCCCC)n	Simple_repeat	1	31	(0)	3881000
2430	22.5	9.8	12.7	chr8	63249842	63250621	(81888015)	+	LTR41B	LTR/ERVL	1	755	(3)	3882969
16	28.6	1.4	2.8	chr8	70402238	70402308	(74736328)	+	(GGTGGA)n	Simple_repeat	1	72	(0)	3893734
1400	21.7	8.4	2.0	chr8	73867732	73868016	(71270620)	+	L1MB7	LINE/L1	5315	5613	(541)	3898688
2960	19.9	7.3	5.8	chr8	73868030	73868798	(71269838)	+	MER21C	LTR/ERVL	156	936	(2)	3898692
257	31.0	9.4	3.7	chr8	88590560	88590690	(56547946)	C	L2b	LINE/L2	(1)	3374	3231	3918813
244	26.4	3.2	4.2	chr8	88590693	88590787	(56547849)	C	MLT1H2	LTR/ERVL-MaLR	(2)	547	454	3918814
349	32.2	1.6	0.0	chr8	88590980	88591100	(56547536)	C	MLT1H2	LTR/ERVL-MaLR	(307)	182	60	3918814
17	24.9	0.6	9.1	chr8	96493395	96493499	(48645137)	+	A-rich	Low_complexity	1	96	(0)	3930397
13	28.6	5.3	1.3	chr8	96493402	96493476	(48645160)	+	GA-rich	Low_complexity	1	79	(0)	3930398
22	26.5	3.2	3.1	chr8	96493672	96493766	(48644870)	+	GA-rich	Low_complexity	1	98	(0)	3930399
1035	18.1	2.8	6.7	chr8	102407855	102408079	(42730557)	C	MER20	DNA/hAT-Charlie	(2)	217	2	3940258
18	17.7	6.5	4.9	chr8	113046320	113046396	(32092240)	+	(AAC)n	Simple_repeat	1	82	(0)	3955614
512	29.4	10.1	1.6	chr8	116144386	116144575	(28994061)	+	MIRb	SINE/MIR	25	232	(36)	3959609
54	0.0	0.0	0.0	chr8	123060832	123060877	(22077759)	+	(AC)n	Simple_repeat	1	46	(0)	3971082
40	2.2	0.0	0.0	chr8	123060878	123060923	(22077713)	+	(TC)n	Simple_repeat	1	46	(0)	3971083
703	25.9	9.0	7.1	chr8	129962819	129963113	(15175523)	+	MLT1K	LTR/ERVL-MaLR	1	301	(294)	3984048
2454	16.3	3.9	1.7	chr8	139483011	139483484	(5655152)	C	MER31A	LTR/ERV1	(0)	485	1	4000456
1069	20.6	18.2	4.8	chr8	139483485	139483993	(5654643)	+	LTR50	LTR/ERVL	120	793	(2)	4000455
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
340	26.3	5.0	8.3	chr8	143281609	143281836	(1856800)	C	LTR50	LTR/ERVL	(509)	286	67	4006009
13	25.5	1.6	4.8	chr8	143283820	143283880	(1854756)	+	G-rich	Low_complexity	1	62	(0)	4006011
1147	11.3	0.0	1.8	chr8	143684160	143684327	(1454309)	+	AluSx	SINE/Alu	1	165	(147)	4006525
19	6.7	0.0	3.0	chr8	144104524	144104556	(1034080)	+	(TCGC)n	Simple_repeat	1	33	(0)	4007111
11	23.9	7.4	0.0	chr8	144358704	144358757	(779879)	+	G-rich	Low_complexity	1	58	(0)	4007510
371	27.8	6.1	0.1	chr9	28127814	28127938	(110266779)	+	MIRc	SINE/MIR	15	151	(117)	4048117
12	12.8	5.6	2.6	chr9	34652039	34652074	(103742643)	+	(GGTGGA)n	Simple_repeat	1	38	(0)	4057743
23	17.4	2.9	4.2	chr9	34652148	34652217	(103742500)	+	(GCGAGG)n	Simple_repeat	1	72	(0)	4057744
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
18	0.0	0.0	0.0	chr9	37465989	37466008	(100928709)	+	(AC)n	Simple_repeat	1	20	(0)	4062718
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
6288	16.4	1.0	1.5	chr9	90884996	90886422	(47508295)	+	L1M2	LINE/L1	1556	2693	(4156)	4114415
841	23.1	7.5	3.0	chr9	92970303	92970747	(45423970)	C	LTR56	LTR/ERV1	(0)	576	9	4117493
614	21.7	11.6	1.9	chr9	95726257	95726411	(42668306)	C	MER103C	DNA/hAT-Charlie	(117)	180	9	4121640
268	23.3	0.0	0.0	chr9	98287565	98287624	(40107093)	C	MLT1O	LTR/ERVL-MaLR	(343)	252	193	4126238
20	20.0	1.4	5.6	chr9	112718283	112718352	(25676365)	+	G-rich	Low_complexity	1	71	(0)	4150361
296	26.0	8.4	3.4	chr9	116687011	116687161	(21707556)	+	MIR3	SINE/MIR	23	175	(33)	4157868
429	26.0	6.2	3.3	chr9	119963594	119963751	(18430966)	+	MIRc	SINE/MIR	74	236	(32)	4164057
11134	13.1	6.8	1.4	chr9	122461384	122464408	(15930309)	C	L1PB1	LINE/L1	(2960)	3902	635	4169061
359	31.1	8.2	0.0	chr9	124415725	124415859	(13978858)	+	MIRb	SINE/MIR	36	182	(86)	4172519
335	10.8	30.8	0.0	chr9	127699578	127699651	(10695066)	+	U6	snRNA	1	107	(0)	4178822
13	19.4	0.0	2.7	chr9	128191414	128191450	(10203267)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	4179938
4257	11.6	3.6	0.2	chr9	130689849	130690460	(7704257)	+	MER51A	LTR/ERV1	1	634	(0)	4185595
432	13.1	0.0	3.5	chr9	133089256	133089342	(5305375)	+	MER51E	LTR/ERV1	1	84	(398)	4190046
227	8.8	0.0	0.0	chr9	133089332	133089365	(5305352)	+	MER51E	LTR/ERV1	43	76	(406)	4190046
2506	13.0	3.9	0.9	chr9	133089366	133089708	(5305009)	+	MER51E	LTR/ERV1	43	402	(80)	4190046
1975	10.1	8.1	0.7	chr9	133089709	133089995	(5304722)	C	AluSq2	SINE/Alu	(3)	310	1	4190047
292	32.6	3.7	8.0	chr9	133589267	133589508	(4805209)	C	MIRb	SINE/MIR	(25)	243	2	4190803
236	23.7	8.5	1.7	chr9	136400372	136400491	(1994226)	+	MIRb	SINE/MIR	18	146	(122)	4194334
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
815	23.5	1.0	1.9	chrX	1072673	1072880	(154968015)	+	MER66A	LTR/ERV1	10	215	(263)	4360063
1095	6.1	0.0	0.0	chrX	1072886	1073016	(154967879)	+	AluSg7	SINE/Alu	1	131	(178)	4360064
16	0.0	0.0	0.0	chrX	1073017	1073034	(154967861)	+	(A)n	Simple_repeat	1	18	(0)	4360065
15	0.0	0.0	0.0	chrX	1661700	1661716	(154379179)	+	(TC)n	Simple_repeat	1	17	(0)	4361497
26	0.0	0.0	0.0	chrX	11111356	11111380	(144929515)	+	(GGC)n	Simple_repeat	1	25	(0)	4377507
351	31.8	5.6	6.4	chrX	13897942	13898142	(142142753)	C	Charlie19a	DNA/hAT-Charlie	(90)	296	92	4381936
1266	13.9	4.1	0.5	chrX	13898143	13898352	(142142543)	C	MER20	DNA/hAT-Charlie	(1)	218	1	4381937
351	31.8	5.6	6.4	chrX	13898353	13898385	(142142510)	C	Charlie19a	DNA/hAT-Charlie	(295)	91	64	4381936
758	16.7	7.4	1.3	chrX	13898425	13898576	(142142319)	+	MER5A1	DNA/hAT-Charlie	4	165	(1)	4381938
12	7.7	0.0	9.1	chrX	44872809	44872841	(111168054)	+	(CCTCC)n	Simple_repeat	1	33	(0)	4429938
12	10.2	10.6	3.9	chrX	49101263	49101309	(106939586)	+	(ATCGACC)n	Simple_repeat	1	52	(0)	4437494
17	19.2	0.0	0.0	chrX	64205654	64205689	(91835206)	+	(CGC)n	Simple_repeat	1	36	(0)	4451082
267	18.8	4.0	0.0	chrX	69556701	69556748	(86484147)	C	Plat_L3	LINE/CR1	(12)	3574	3525	4458385
237	31.2	1.5	0.0	chrX	69556751	69556814	(86484081)	C	MIR3	SINE/MIR	(67)	141	77	4458386
15	24.0	2.8	5.4	chrX	71283339	71283410	(84757485)	+	(TCTCCC)n	Simple_repeat	1	74	(0)	4461190
394	25.5	3.9	2.0	chrX	72277439	72277538	(83763357)	C	L2b	LINE/L2	(17)	3358	3257	4463037
13	17.4	6.4	2.0	chrX	86148401	86148447	(69892448)	+	G-rich	Low_complexity	1	50	(0)	4477788
19	13.7	2.5	0.0	chrX	154428348	154428387	(1612508)	+	A-rich	Low_complexity	1	41	(0)	4571850