36	20.6	2.0	2.0	chr1	2586798	2586895	(246369527)	+	(GAGCCGG)n	Simple_repeat	1	100	(0)	3365
309	28.4	2.2	0.0	chr1	15246992	15247093	(233709329)	+	MIR	SINE/MIR	42	146	(62)	24859
1985	8.3	0.0	4.0	chr1	22451392	22451668	(226504754)	+	AluSq	SINE/Alu	40	305	(8)	40206
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
200	25.0	7.7	0.0	chr1	26900635	26900694	(222055728)	+	MIR	SINE/MIR	128	192	(70)	50397
17	5.2	0.0	14.6	chr1	27725927	27725981	(221230441)	+	(GCCC)n	Simple_repeat	1	55	(0)	52395
3948	14.2	7.8	3.1	chr1	28022935	28023772	(220932650)	+	L1MC3	LINE/L1	6714	7594	(191)	53090
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
13	21.9	0.0	2.6	chr1	45303630	45303668	(203652754)	+	(GGAGCC)n	Simple_repeat	1	39	(0)	87710
21	20.1	0.0	0.0	chr1	46247477	46247516	(202708906)	+	(C)n	Simple_repeat	1	40	(0)	89651
42	20.8	2.5	3.2	chr1	56007239	56007359	(192949063)	+	(TTCT)n	Simple_repeat	1	124	(0)	108033
1883	28.2	4.6	4.8	chr1	56007486	56008333	(192948089)	+	LTR82A	LTR/ERVL	20	865	(7)	108034
4448	16.9	4.4	1.1	chr1	75264422	75265384	(173691038)	+	L1M2	LINE/L1	3464	4459	(2386)	139725
1784	17.0	1.5	1.5	chr1	78114653	78114981	(170841441)	+	L1MC1	LINE/L1	5999	6327	(6)	144118
46	20.3	0.8	3.3	chr1	109042229	109042348	(139914074)	+	(GGCGG)n	Simple_repeat	1	121	(0)	187838
8241	12.1	3.4	0.4	chr1	114971529	114972950	(133983472)	C	L1M1	LINE/L1	(2088)	4058	2593	197527
1357	30.9	4.9	4.8	chr1	150865180	150865746	(98090676)	+	HAL1	LINE/L1	2	569	(1938)	219981
1297	20.7	13.7	5.9	chr1	150865747	150865982	(98090440)	C	HAL1	LINE/L1	(714)	1793	1538	219982
18	26.1	0.0	4.6	chr1	156282735	156282799	(92673623)	+	(CCG)n	Simple_repeat	1	65	(0)	229845
39	21.7	0.0	7.8	chr1	160098681	160098822	(88857600)	+	(CGCCC)n	Simple_repeat	1	142	(0)	235224
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
12	14.7	0.0	5.9	chr1	179025679	179025712	(69930710)	+	(CGGCGC)n	Simple_repeat	1	34	(0)	264027
706	22.0	10.8	4.1	chr1	184484574	184484815	(64471607)	+	LTR86A2	LTR/ERVL	33	292	(216)	272727
44	0.0	0.0	0.0	chr1	184484885	184484922	(64471500)	+	(TG)n	Simple_repeat	1	38	(0)	272728
268	22.1	8.1	0.0	chr1	184484942	184485009	(64471413)	+	MIRb	SINE/MIR	132	205	(63)	272729
8168	18.4	6.3	5.6	chr1	199836935	199837738	(49118684)	+	L1PA13	LINE/L1	2140	2973	(3564)	293072
17	25.8	3.9	2.5	chr1	211579416	211579494	(37376928)	+	(GGCGCGG)n	Simple_repeat	1	80	(0)	312977
20007	13.2	2.2	1.6	chr1	223235196	223241664	(25714758)	C	L1MC1	LINE/L1	(9)	6499	1	330428
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
277	15.4	1.9	0.0	chr1	224148209	224148260	(24808162)	+	MADE1	DNA/TcMar-Mariner	28	80	(0)	331901
2623	7.2	0.0	3.7	chr1	224148369	224148689	(24807733)	+	AluY	SINE/Alu	1	309	(2)	331902
5776	14.0	2.5	4.1	chr1	225291628	225292983	(23663439)	C	L1MA5A	LINE/L1	(694)	7022	5672	333759
10038	22.6	5.8	3.7	chr1	226259260	226260391	(22696031)	+	L1MC1	LINE/L1	2438	3700	(2446)	335553
10291	15.2	11.3	3.7	chr1	227379813	227380367	(21576055)	+	L1MC1	LINE/L1	809	1380	(5128)	337412
33	0.0	2.6	2.5	chr1	227380368	227380406	(21576016)	+	(AAAC)n	Simple_repeat	1	40	(0)	337414
10291	15.2	11.3	3.7	chr1	227380407	227380913	(21575509)	+	L1MC1	LINE/L1	1381	1905	(4603)	337412
275	15.5	9.3	0.1	chr1	228042403	228043119	(20913303)	+	(GATG)n	Simple_repeat	1	784	(0)	338223
4847	25.5	12.5	3.4	chr1	228236056	228237257	(20719165)	C	L1MEf	LINE/L1	(4826)	1814	489	338479
1762	25.6	2.7	5.3	chr1	232820137	232820664	(16135758)	+	LTR33	LTR/ERVL	2	515	(0)	345490
1558	33.8	11.8	1.8	chr1	232820665	232820953	(16135469)	+	L2a	LINE/L2	2500	2856	(563)	345489
11801	18.7	4.1	1.2	chr1	233561428	233565368	(15391054)	+	L1MA5	LINE/L1	2076	6141	(1421)	346592
738	25.5	11.6	1.6	chr1	234371734	234372373	(14584049)	C	L1ME3B	LINE/L1	(2977)	3169	2439	347757
338	28.9	10.3	1.9	chr1	239487462	239487666	(9468756)	+	L1M5	LINE/L1	4381	4604	(1542)	356203
23	16.7	0.0	0.0	chr1	239487858	239487897	(9468525)	+	A-rich	Low_complexity	1	40	(0)	356204
477	23.3	16.1	2.0	chr1	239487911	239488160	(9468262)	+	L1ME4b	LINE/L1	40	331	(561)	356205
13	25.0	0.0	0.0	chr10	28303080	28303117	(105494305)	+	(GGCGG)n	Simple_repeat	1	38	(0)	414798
15	25.2	4.8	1.5	chr10	63133249	63133311	(70664111)	+	(GGC)n	Simple_repeat	1	66	(0)	461239
58	7.6	0.0	1.2	chr10	67849220	67849359	(65948063)	+	(GGAGG)n	Simple_repeat	1	138	(0)	468032
12	0.0	4.3	4.2	chr10	69123850	69123872	(64673550)	+	(TCCT)n	Simple_repeat	1	24	(0)	470925
24	31.9	1.0	1.9	chr10	74826673	74826776	(58970646)	+	(GGC)n	Simple_repeat	1	105	(0)	481944
16	9.8	0.0	0.0	chr10	87880273	87880294	(45917128)	+	(T)n	Simple_repeat	1	22	(0)	501952
34	0.0	0.0	0.0	chr10	101830682	101830710	(31966712)	+	(CA)n	Simple_repeat	1	29	(0)	525757
12	10.8	6.7	0.0	chr10	101830872	101830901	(31966521)	+	(GCACAT)n	Simple_repeat	1	32	(0)	525758
13	9.1	0.0	3.9	chr10	102918287	102918312	(30879110)	+	(CTCC)n	Simple_repeat	1	26	(0)	527858
557	15.8	15.5	0.8	chr10	110305131	110305251	(23492171)	+	MER5A	DNA/hAT-Charlie	48	189	(0)	539234
12	22.6	2.3	2.3	chr10	110497915	110497957	(23299465)	+	G-rich	Low_complexity	1	44	(0)	539647
18	25.7	0.0	0.0	chr10	123008737	123008784	(10788638)	+	(GCC)n	Simple_repeat	1	48	(0)	559613
325	21.1	3.7	3.7	chr10	133521518	133521625	(275797)	C	PRIMA4-int	LTR/ERV1	(7675)	595	488	572595
14	22.8	3.8	1.8	chr11	6390309	6390361	(128696261)	+	G-rich	Low_complexity	1	55	(0)	581255
18	29.9	0.0	0.0	chr11	117986112	117986158	(17100464)	+	(CA)n	Simple_repeat	1	47	(0)	752104
18	6.7	0.0	5.7	chr11	119205984	119206018	(15880604)	+	(CCGCC)n	Simple_repeat	1	35	(0)	754441
37	0.0	0.0	0.0	chr11	119206290	119206323	(15880299)	+	(CGG)n	Simple_repeat	1	34	(0)	754442
13	13.2	6.1	0.0	chr11	124673756	124673788	(10412834)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	763397
22	22.0	0.0	8.6	chr11	126063337	126063429	(9023193)	+	(GCCCC)n	Simple_repeat	1	93	(0)	765436
68	4.1	0.0	0.0	chr11	134037051	134037125	(1049497)	+	(ACTCTTCTCG)n	Simple_repeat	1	75	(0)	776693
18	18.3	1.6	6.2	chr11	134037391	134037453	(1049169)	+	G-rich	Low_complexity	1	64	(0)	776694
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
24	25.9	3.3	2.1	chr12	14365688	14365778	(118909531)	+	(GCG)n	Simple_repeat	1	94	(0)	801269
13	31.2	1.0	6.1	chr12	31728865	31728961	(101546348)	+	(GGCGG)n	Simple_repeat	1	98	(0)	825911
14	15.3	2.6	2.6	chr12	53380190	53380227	(79895082)	+	(GTCCGC)n	Simple_repeat	1	39	(0)	854630
2393	8.0	0.6	1.0	chr12	53380938	53381251	(79894058)	C	AluSp	SINE/Alu	(0)	313	1	854632
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
18	17.9	0.0	4.2	chr12	108731549	108731596	(24543713)	+	(CCGCCC)n	Simple_repeat	1	48	(0)	940859
12	22.2	9.8	2.2	chr12	111368932	111369013	(21906296)	+	(CGGCGA)n	Simple_repeat	1	90	(0)	946920
14	13.1	0.0	0.0	chr12	111368992	111369017	(21906292)	+	(CGG)n	Simple_repeat	1	26	(0)	946921
21	24.2	0.0	6.8	chr12	113335143	113335230	(19940079)	+	(CCCGC)n	Simple_repeat	1	88	(0)	951315
41	25.4	2.0	3.3	chr12	120265740	120265888	(13009421)	+	(CGCCCG)n	Simple_repeat	1	152	(0)	966551
16	9.9	0.0	5.6	chr12	125049863	125049898	(8225411)	+	G-rich	Low_complexity	1	36	(0)	977468
16	11.7	0.0	0.0	chr13	19958702	19958735	(94405593)	+	(CCT)n	Simple_repeat	1	34	(0)	993492
24	23.4	3.9	1.2	chr13	42272049	42272132	(72092196)	+	(GCG)n	Simple_repeat	1	86	(0)	1027115
9956	19.6	5.2	1.8	chr13	61755535	61757939	(52606389)	C	L1PA16	LINE/L1	(674)	5492	2991	1055153
2626	23.1	8.0	3.5	chr13	61761567	61762226	(52602102)	+	L1ME1	LINE/L1	5483	6179	(0)	1055160
624	35.1	6.0	3.5	chr13	61789571	61789912	(52574416)	C	LTR16C	LTR/ERVL	(5)	484	134	1055204
945	35.4	10.5	3.6	chr13	61875976	61876854	(52487474)	+	L2a	LINE/L2	2062	3007	(412)	1055305
17	12.8	2.9	0.0	chr13	61880271	61880304	(52484024)	+	(ACAA)n	Simple_repeat	1	35	(0)	1055308
684	18.7	16.5	3.6	chr13	61905715	61905960	(52458368)	C	HERV35I-int	LTR/ERV1	(4917)	2001	1821	1055343
1131	22.8	2.9	2.2	chr13	61905952	61906225	(52458103)	C	HERV35I-int	LTR/ERV1	(6051)	280	5	1055343
1505	34.0	6.9	2.7	chr13	61921424	61922075	(52442253)	+	L2a	LINE/L2	2398	3081	(338)	1055360
7219	9.0	1.1	0.7	chr13	61922106	61923737	(52440591)	C	L1PA10	LINE/L1	(4)	6164	4525	1055363
563	7.6	1.2	0.0	chr13	61952987	61953065	(52411263)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	1055397
302	30.6	7.5	2.4	chr13	61992327	61992490	(52371838)	C	LTR84a	LTR/ERVL	(513)	244	72	1055457
422	20.4	7.3	1.3	chr13	61992617	61992770	(52371558)	+	L1MC5a	LINE/L1	1194	1357	(1420)	1055458
485	28.9	10.0	6.7	chr13	61992781	61993371	(52370957)	C	MLT1H	LTR/ERVL-MaLR	(0)	624	1	1055459
2218	10.3	0.0	0.4	chr13	62008908	62009231	(52355097)	+	AluSp	SINE/Alu	3	313	(0)	1055486
1952	19.7	5.1	2.7	chr13	62009232	62009414	(52354914)	C	L1MC1	LINE/L1	(260)	6073	5886	1055485
650	33.2	15.2	1.6	chr13	62024044	62024738	(52339590)	C	L1M5	LINE/L1	(1463)	4683	3877	1055508
14	32.5	0.0	0.0	chr13	62038666	62038719	(52325609)	+	A-rich	Low_complexity	1	54	(0)	1055524
221	30.4	2.1	4.2	chr13	62054949	62055044	(52309284)	+	L2a	LINE/L2	3333	3426	(0)	1055539
3732	21.6	2.0	10.8	chr13	62074253	62076285	(52288043)	C	L1MA5A	LINE/L1	(257)	6040	4193	1055560
509	33.3	5.5	3.9	chr13	62096399	62097002	(52267326)	+	L1ME3D	LINE/L1	5361	5970	(272)	1055580
691	27.2	10.2	7.1	chr13	62128428	62128607	(52235721)	C	L1ME1	LINE/L1	(5085)	1315	1160	1055609
1712	14.8	0.0	0.0	chr13	62128608	62128877	(52235451)	C	L1PB4	LINE/L1	(1)	6155	5886	1055616
1155	27.9	2.8	1.6	chr13	62129110	62129663	(52234665)	C	LTR40a	LTR/ERVL	(1)	518	14	1055617
6653	17.6	11.3	5.3	chr13	62132968	62134677	(52229651)	+	MER4-int	LTR/ERV1	970	3167	(3431)	1055618
4651	13.6	3.0	3.7	chr13	62138405	62139266	(52225062)	+	MER4-int	LTR/ERV1	5706	6561	(37)	1055618
2442	15.5	2.7	4.8	chr13	62139353	62139857	(52224471)	+	MER4A	LTR/ERV1	1	664	(0)	1055618
4870	18.1	2.6	1.9	chr13	62147315	62148279	(52216049)	C	L1MA4	LINE/L1	(209)	6091	5115	1055631
870	15.4	0.4	0.7	chr13	62148283	62148434	(52215894)	C	THE1D	LTR/ERVL-MaLR	(2)	379	234	1055633
1990	22.3	2.5	8.0	chr13	62277351	62278115	(52086213)	C	L1MD2	LINE/L1	(3442)	3095	2379	1055788
1085	27.1	8.5	2.9	chr13	62564509	62564982	(51799346)	C	L1MEf	LINE/L1	(4742)	1736	1116	1056166
1076	30.4	8.9	2.7	chr13	62565065	62565724	(51798604)	C	L1MEf	LINE/L1	(5320)	1052	348	1056166
3519	22.2	10.0	2.5	chr13	62600389	62602547	(51761781)	C	L1MB1	LINE/L1	(31)	6373	2106	1056212
8041	19.6	3.2	3.5	chr13	62618864	62621712	(51742616)	+	L1MA4A	LINE/L1	1810	4653	(2909)	1056232
321	32.5	15.2	2.5	chr13	62653390	62653714	(51710614)	+	MLT1L	LTR/ERVL-MaLR	45	418	(192)	1056272
479	32.5	8.1	3.4	chr13	62677588	62678423	(51685905)	+	HAL1ME	LINE/L1	818	1700	(807)	1056300
680	25.1	8.4	1.0	chr13	62774194	62774591	(51589737)	+	Zaphod	DNA/hAT-Tip100	2989	3418	(613)	1056422
442	29.8	11.6	6.2	chr13	62774611	62774870	(51589458)	C	L1MC5	LINE/L1	(4119)	2123	1853	1056413
1004	13.0	0.0	0.0	chr13	62774871	62775032	(51589296)	C	L1MA1	LINE/L1	(0)	6302	6141	1056423
70	14.6	2.5	3.7	chr13	62851204	62851361	(51512967)	+	A-rich	Low_complexity	1	162	(0)	1056520
446	26.2	13.5	7.2	chr13	62932055	62932440	(51431888)	+	HAL1	LINE/L1	714	1127	(1380)	1056624
2709	18.2	3.5	4.7	chr13	63088785	63089716	(51274612)	+	L1M3	LINE/L1	4750	5677	(491)	1056807
27	17.7	1.4	5.6	chr13	63096726	63096796	(51267532)	+	(AC)n	Simple_repeat	1	72	(0)	1056822
12	20.1	5.0	0.0	chr13	63296678	63296717	(51067611)	+	(ATATTC)n	Simple_repeat	1	42	(0)	1057075
239	35.5	8.9	3.4	chr13	63512685	63512949	(50851379)	C	L2	LINE/L2	(571)	2848	2568	1057383
14012	19.2	5.6	1.5	chr13	63861556	63864847	(50499481)	+	L1MA4A	LINE/L1	2269	5749	(1813)	1057822
6543	18.6	4.0	3.2	chr13	64084283	64085792	(50278536)	C	L1MC1	LINE/L1	(760)	5386	3865	1058108
237	30.2	5.7	0.8	chr13	64317654	64317770	(50046558)	C	MIR	SINE/MIR	(0)	262	140	1058384
310	28.9	12.9	4.5	chr13	64317780	64318119	(50046209)	C	L1MC	LINE/L1	(3006)	3140	2761	1058385
9813	20.0	5.7	1.9	chr13	64571798	64574949	(49789379)	C	L1MC1	LINE/L1	(3063)	3258	1	1058703
247	37.1	5.0	0.7	chr13	64599512	64599663	(49764665)	C	MLT1O	LTR/ERVL-MaLR	(345)	197	39	1058734
13	20.9	0.0	0.0	chr13	64599730	64599762	(49764566)	+	(TAATTT)n	Simple_repeat	1	33	(0)	1058735
18	4.7	0.0	0.0	chr13	65332460	65332481	(49031847)	+	(TC)n	Simple_repeat	1	22	(0)	1059671
34	5.5	0.0	0.0	chr13	65332487	65332524	(49031804)	+	(CA)n	Simple_repeat	1	38	(0)	1059672
1803	19.7	0.0	0.3	chr13	65332591	65332894	(49031434)	+	AluJo	SINE/Alu	1	303	(9)	1059673
11	24.1	0.0	0.0	chr13	65414596	65414629	(48949699)	+	(ATTTAA)n	Simple_repeat	1	34	(0)	1059786
219	35.2	10.3	0.0	chr13	65414730	65414851	(48949477)	+	MIRc	SINE/MIR	53	188	(80)	1059787
631	23.7	5.4	3.2	chr13	65472360	65472577	(48891751)	+	L1MB8	LINE/L1	5955	6177	(1)	1059858
5311	14.8	1.9	0.4	chr13	65474060	65475051	(48889277)	+	L1PA16	LINE/L1	5152	6157	(9)	1059861
3259	24.4	3.5	0.9	chr13	65659050	65659925	(48704403)	C	L1MD2	LINE/L1	(9)	6350	5452	1060088
394	33.8	4.6	2.1	chr13	66016077	66016309	(48348019)	C	LTR85c	LTR/Gypsy?	(575)	248	10	1060523
252	24.0	13.6	1.2	chr13	66016433	66016514	(48347814)	+	MIRb	SINE/MIR	166	253	(15)	1060524
8819	17.0	3.3	4.0	chr13	66196505	66199735	(48164593)	+	L1PA15	LINE/L1	3135	6165	(0)	1060740
312	32.8	13.8	1.1	chr13	66252697	66252973	(48111355)	C	L2	LINE/L2	(1198)	2221	1904	1060801
559	25.6	2.7	0.7	chr13	66253117	66253266	(48111062)	+	MIR	SINE/MIR	78	224	(38)	1060802
4247	21.7	3.4	0.9	chr13	66295967	66297144	(48067184)	+	L1MB4	LINE/L1	2726	3933	(2213)	1060857
2425	22.4	5.2	2.0	chr13	66298244	66298575	(48065753)	+	L1MB4	LINE/L1	5802	6142	(38)	1060857
39	22.6	6.0	1.9	chr13	66298594	66298608	(48065720)	+	(GATA)n	Simple_repeat	1	25	(133)	1060860
14	25.5	3.3	3.2	chr13	66298609	66298669	(48065659)	+	G-rich	Low_complexity	1	63	(0)	1060861
39	22.6	6.0	1.9	chr13	66298670	66298742	(48065586)	+	(GATA)n	Simple_repeat	26	158	(0)	1060860
1971	30.2	10.1	3.6	chr13	66298745	66299541	(48064787)	C	L2b	LINE/L2	(121)	3305	2481	1060862
3156	17.8	1.1	0.0	chr13	66697707	66698307	(47666021)	+	L1MB3	LINE/L1	5575	6182	(1)	1061343
17	16.7	2.5	0.0	chr13	66746495	66746534	(47617794)	+	GA-rich	Low_complexity	1	41	(0)	1061401
35	0.0	0.0	0.0	chr13	66801997	66802029	(47562299)	+	(TGTT)n	Simple_repeat	1	33	(0)	1061478
18	8.7	0.0	0.0	chr13	67061410	67061434	(47302894)	+	(TA)n	Simple_repeat	1	25	(0)	1061814
444	30.7	9.6	2.1	chr13	67132509	67132797	(47231531)	+	L3	LINE/CR1	3161	3473	(626)	1061901
6040	9.7	1.1	2.4	chr13	67316909	67318047	(47046281)	C	L1PA11	LINE/L1	(0)	6174	5055	1062121
672	29.1	6.9	3.1	chr13	67324473	67325133	(47039195)	C	L1ME3Cz	LINE/L1	(644)	353	30	1062130
243	21.4	13.4	0.0	chr13	67325192	67325294	(47039034)	+	L1MEi	LINE/L1	844	962	(1250)	1062134
8861	13.5	1.1	0.7	chr13	67386263	67387742	(46976586)	+	L1PREC2	LINE/L1	2264	3749	(2397)	1062218
13989	21.1	2.9	0.9	chr13	67467853	67471732	(46892596)	C	L1M2	LINE/L1	(2324)	5238	720	1062316
6491	22.1	6.6	2.8	chr13	67556771	67559037	(46805291)	+	L1MB7	LINE/L1	1213	3258	(3748)	1062415
707	32.3	16.2	3.8	chr13	67738324	67738971	(46625357)	C	L2b	LINE/L2	(1)	3425	2643	1062652
387	27.4	12.7	5.8	chr13	67957080	67957319	(46407009)	C	HAL1ME	LINE/L1	(757)	1708	1450	1062922
6542	20.1	3.8	2.2	chr13	68067375	68070307	(46294021)	C	L1MB3	LINE/L1	(2311)	4071	1097	1063060
847	26.1	11.1	3.1	chr13	68255946	68256622	(46107706)	+	L1MEc	LINE/L1	1853	2593	(3726)	1063309
324	27.9	4.3	3.2	chr13	68256613	68256797	(46107531)	+	L1MEc	LINE/L1	3262	3448	(2871)	1063309
10267	20.0	5.4	4.3	chr13	68353609	68355225	(46009103)	C	L1MB1	LINE/L1	(301)	5867	4243	1063433
30	3.4	0.0	0.0	chr13	68355226	68355255	(46009073)	+	(TG)n	Simple_repeat	1	30	(0)	1063435
10267	20.2	3.9	4.0	chr13	68355256	68356629	(46007699)	C	L1MB1	LINE/L1	(1898)	4242	2817	1063433
41	4.7	0.0	0.0	chr13	70278832	70278875	(44085453)	+	(TG)n	Simple_repeat	1	44	(0)	1065930
2418	28.9	5.4	4.3	chr13	70836066	70838324	(43526004)	C	L1MEc	LINE/L1	(2674)	3645	1383	1066684
239	38.5	14.2	2.7	chr13	71227273	71227825	(43136503)	+	L2	LINE/L2	297	923	(2496)	1067191
14	11.1	0.0	6.1	chr13	71545359	71545391	(42818937)	+	(ATA)n	Simple_repeat	1	33	(0)	1067588
53	20.9	0.0	0.9	chr13	71545503	71545614	(42818714)	+	GA-rich	Low_complexity	1	112	(0)	1067589
2243	11.1	0.7	1.0	chr13	72944166	72944471	(41419857)	+	AluSx1	SINE/Alu	2	306	(6)	1069601
340	9.8	1.6	0.0	chr13	72944703	72944763	(41419565)	C	L1PA16	LINE/L1	(1)	6165	6104	1069602
13	23.7	4.8	3.0	chr13	75296670	75296732	(39067596)	+	GA-rich	Low_complexity	1	66	(0)	1073111
228	20.3	0.0	6.2	chr13	75296829	75296912	(39067416)	C	MIR3	SINE/MIR	(39)	191	115	1073112
541	14.7	17.8	3.1	chr13	75682881	75683042	(38681286)	C	L1MD	LINE/L1	(743)	5403	5213	1073758
930	11.8	1.6	0.0	chr13	75683051	75683177	(38681151)	C	AluSx3	SINE/Alu	(6)	305	177	1073759
387	26.1	7.0	0.9	chr13	79258198	79258466	(35105862)	C	L1MEh	LINE/L1	(3766)	2553	2227	1078683
75	16.1	1.9	2.5	chr13	79291014	79291172	(35073156)	+	(TTTC)n	Simple_repeat	1	162	(0)	1078719
10699	18.7	4.2	0.9	chr13	79815284	79816625	(34547703)	C	L1MB8	LINE/L1	(1998)	4148	2752	1079455
1676	23.3	6.3	7.2	chr13	82126156	82126665	(32237663)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1082374
15	25.0	1.9	1.8	chr13	82126688	82126741	(32237587)	+	(TATAAT)n	Simple_repeat	1	55	(0)	1082375
9610	13.7	5.8	3.5	chr13	82172653	82174007	(32190321)	+	L1PA16	LINE/L1	3515	4899	(1247)	1082434
2483	14.0	0.2	2.0	chr13	82174008	82174415	(32189913)	C	MER57B1	LTR/ERV1	(0)	401	1	1082435
5629	20.5	2.2	3.9	chr13	86467876	86469141	(27895187)	+	L1M2	LINE/L1	3675	4916	(1227)	1087769
5627	11.3	2.4	1.7	chr13	86611912	86613020	(27751308)	C	L1PA16	LINE/L1	(10)	6156	5050	1087968
1216	14.8	1.8	0.0	chr13	86613018	86613240	(27751088)	C	L1P4	LINE/L1	(978)	5168	4942	1087969
307	32.1	9.5	5.6	chr13	86613243	86613493	(27750835)	C	HAL1	LINE/L1	(864)	1643	1382	1087970
1310	29.5	7.1	3.5	chr13	89916188	89917141	(24447187)	C	L1MEa	LINE/L1	(5056)	1144	179	1092263
3206	26.9	8.5	2.5	chr13	90336417	90339011	(24025317)	+	L1MA4	LINE/L1	640	3075	(3770)	1092797
4518	18.4	9.7	1.1	chr13	91463451	91465013	(22899315)	+	L1MD2	LINE/L1	4629	6339	(20)	1094280
420	37.6	5.7	2.0	chr14	35236365	35236766	(71806952)	+	L2	LINE/L2	1840	2257	(1162)	1149615
47	16.5	2.7	2.6	chr14	35236898	35236971	(71806747)	+	(TCTC)n	Simple_repeat	1	75	(0)	1149616
66	5.1	1.7	5.1	chr14	35236972	35237086	(71806632)	+	(TTCC)n	Simple_repeat	1	117	(0)	1149617
23	16.3	0.0	2.0	chr14	74493501	74493550	(32550168)	+	(CCCGC)n	Simple_repeat	1	50	(0)	1208642
38	23.2	5.4	3.4	chr14	100238902	100239067	(6804651)	+	(GAGGC)n	Simple_repeat	1	175	(0)	1251501
15	27.3	1.8	1.8	chr15	42920715	42920769	(59070420)	+	(CCG)n	Simple_repeat	1	56	(0)	1296018
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
12	16.3	2.8	2.7	chr15	52019123	52019158	(49972031)	+	G-rich	Low_complexity	1	37	(0)	1310540
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
1436	13.6	6.6	9.0	chr15	66356914	66357223	(35633966)	C	AluJb	SINE/Alu	(9)	303	2	1334510
16	8.2	0.0	0.0	chr15	74995619	74995644	(26995545)	+	(GCAGC)n	Simple_repeat	1	26	(0)	1349979
50	17.5	1.8	1.8	chr15	95716838	95716947	(6274242)	+	GA-rich	Low_complexity	1	112	(0)	1384839
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
5709	17.6	3.1	8.0	chr15	101590743	101592237	(398952)	C	L1MD1	LINE/L1	(2658)	3879	2450	1392982
9542	18.9	11.9	2.8	chr15	101678278	101680626	(310563)	C	L1MDa	LINE/L1	(4025)	2608	17	1393102
31	32.7	0.0	1.6	chr16	2178771	2178895	(88159450)	+	(AGCCC)n	Simple_repeat	1	125	(0)	1396987
13	21.9	2.3	2.2	chr16	4476448	4476491	(85861854)	+	(GACAGGC)n	Simple_repeat	1	45	(0)	1401226
19	19.7	0.0	2.1	chr16	12803887	12803934	(77534411)	+	G-rich	Low_complexity	1	48	(0)	1418653
23	30.6	1.2	0.0	chr16	23510378	23510461	(66827884)	+	(CCGCCG)n	Simple_repeat	1	85	(0)	1442438
451	8.2	1.4	1.4	chr16	23510637	23510710	(66827635)	C	MER53	DNA/hAT	(0)	193	120	1442439
15	25.6	1.4	5.5	chr16	28924715	28924786	(61413559)	+	(GCCCCT)n	Simple_repeat	1	73	(0)	1454762
21	19.2	3.2	3.1	chr16	30958013	30958075	(59380270)	+	(CGC)n	Simple_repeat	1	65	(0)	1459289
12	20.5	0.0	2.8	chr16	31179819	31179854	(59158491)	+	(CCCCCG)n	Simple_repeat	1	36	(0)	1459794
329	25.2	7.0	3.6	chr16	50024841	50024951	(40313394)	+	L2a	LINE/L2	3311	3425	(1)	1471634
12	18.8	2.6	2.6	chr16	58129651	58129688	(32208657)	+	(ACGTG)n	Simple_repeat	1	39	(0)	1486505
572	33.0	14.2	0.6	chr16	67183210	67183556	(23154789)	+	L2b	LINE/L2	2927	3328	(47)	1501228
12	32.6	1.8	0.0	chr16	89171721	89171777	(1166568)	+	(CTGGCC)n	Simple_repeat	1	58	(0)	1540858
12	22.0	2.7	0.0	chr16	89701916	89701952	(636393)	+	G-rich	Low_complexity	1	38	(0)	1541697
15	26.1	1.0	8.2	chr16	89874100	89874195	(464150)	+	G-rich	Low_complexity	1	97	(0)	1542009
302	23.0	18.0	0.0	chr16	90022365	90022464	(315881)	C	L2a	LINE/L2	(2)	3424	3303	1542246
20	25.6	3.7	0.9	chr17	28041410	28041481	(55215960)	+	A-rich	Low_complexity	1	74	(0)	1587976
13	16.2	2.7	2.6	chr17	28041431	28041467	(55215974)	+	GA-rich	Low_complexity	1	38	(0)	1587977
452	26.2	12.1	1.2	chr17	38718519	38718680	(44538761)	C	MIRc	SINE/MIR	(85)	183	2	1608433
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
228	25.6	0.3	1.0	chr17	43912755	43913332	(39344109)	+	(CA)n	Simple_repeat	1	580	(0)	1618843
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
12	26.1	1.9	3.6	chr17	59331480	59331533	(23925908)	+	(GGCG)n	Simple_repeat	1	55	(0)	1647025
42	36.5	3.0	0.0	chr17	60164173	60164369	(23093072)	+	(TCTC)n	Simple_repeat	1	203	(0)	1648702
29	0.0	7.9	0.0	chr17	60164371	60164408	(23093033)	+	(TCTT)n	Simple_repeat	1	41	(0)	1648703
2064	10.9	0.7	1.1	chr17	60164415	60164690	(23092751)	C	AluSx	SINE/Alu	(37)	275	1	1648704
17	30.2	1.1	4.4	chr17	68247975	68248063	(15009378)	+	(GGCGC)n	Simple_repeat	1	90	(0)	1663830
147	13.2	1.1	2.9	chr17	69366249	69366521	(13890920)	+	(TTTC)n	Simple_repeat	1	276	(0)	1665624
999	22.7	0.0	6.6	chr17	69366522	69366704	(13890737)	C	AluJb	SINE/Alu	(1)	311	142	1665625
96	17.4	1.9	2.3	chr17	74389858	74390067	(8867374)	+	(CCTT)n	Simple_repeat	1	214	(0)	1674061
313	36.5	11.1	2.3	chr17	74390075	74390581	(8866860)	C	HAL1	LINE/L1	(1219)	1288	880	1674062
17	22.7	0.0	0.0	chr17	77281362	77281397	(5976044)	+	G-rich	Low_complexity	1	36	(0)	1679798
382	30.5	0.9	0.1	chr17	78477867	78478929	(4778512)	+	(ACC)n	Simple_repeat	1	1073	(0)	1681901
19	21.2	0.0	2.0	chr17	83051904	83051954	(205487)	+	(GGCGG)n	Simple_repeat	1	51	(0)	1688528
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
550	25.7	9.0	5.0	chr18	31754576	31754776	(48618509)	+	LTR103b_Mam	LTR/ERV1?	304	513	(35)	1728152
1699	14.9	11.2	5.2	chr18	32241500	32241950	(48131335)	+	MER4CL34	LTR/ERV1	1	765	(0)	1729093
5901	21.9	4.7	3.4	chr18	32588775	32590505	(47782780)	+	L1MDa	LINE/L1	256	2097	(4536)	1729602
171	19.2	1.7	1.1	chr18	39511837	39512198	(40861087)	+	GA-rich	Low_complexity	1	368	(0)	1738810
17	26.8	1.4	4.1	chr18	57435084	57435155	(22938130)	+	(CTCC)n	Simple_repeat	1	73	(0)	1765551
12	13.2	5.7	2.7	chr18	74496247	74496281	(5877004)	+	(GTGGC)n	Simple_repeat	1	37	(0)	1789971
12	23.6	0.0	9.2	chr18	79069339	79069403	(1303882)	+	G-rich	Low_complexity	1	65	(0)	1795141
12	20.8	0.0	2.9	chr19	1082493	1082527	(57535089)	+	G-rich	Low_complexity	1	35	(0)	1798198
19	26.3	3.7	2.4	chr19	1652614	1652694	(56964922)	+	(CCGCG)n	Simple_repeat	1	84	(0)	1799198
416	23.9	3.9	1.4	chr19	3244226	3245438	(55372178)	+	(TG)n	Simple_repeat	1	1260	(0)	1802728
188	32.3	18.1	0.0	chr19	3286125	3286251	(55331365)	+	MIR	SINE/MIR	16	170	(92)	1802829
24	25.9	9.0	1.7	chr19	4123955	4124120	(54493496)	+	(CGAGGC)n	Simple_repeat	1	181	(0)	1804793
13	16.2	10.4	0.0	chr19	4556485	4556532	(54061084)	+	G-rich	Low_complexity	1	53	(0)	1805852
18	22.6	0.0	3.6	chr19	4867760	4867814	(53749802)	+	(CCCGC)n	Simple_repeat	1	55	(0)	1806716
15	9.7	2.7	5.3	chr19	6110541	6110577	(52507039)	+	(CCCG)n	Simple_repeat	1	38	(0)	1809426
2752	4.8	0.0	0.0	chr19	6111051	6111361	(52506255)	+	AluY	SINE/Alu	1	311	(0)	1809428
999	19.4	2.8	1.9	chr19	6111451	6111665	(52505951)	+	MER58A	DNA/hAT-Charlie	2	218	(6)	1809429
27	6.1	0.0	0.0	chr19	6476511	6476545	(52141071)	+	(CTGAGTCC)n	Simple_repeat	1	35	(0)	1810329
16	17.6	3.3	6.5	chr19	6678053	6678112	(51939504)	+	(GGCGT)n	Simple_repeat	1	62	(0)	1810893
29	24.4	4.9	3.1	chr19	6739632	6739754	(51877862)	+	(GGC)n	Simple_repeat	1	129	(0)	1811028
31	8.3	2.0	0.0	chr19	7197322	7197372	(51420244)	+	(GAGT)n	Simple_repeat	1	52	(0)	1812249
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
16	23.5	1.5	4.5	chr19	7830142	7830206	(50787410)	+	G-rich	Low_complexity	1	66	(0)	1813826
13	16.8	0.0	5.4	chr19	9835104	9835140	(48782476)	+	G-rich	Low_complexity	1	37	(0)	1818234
16	21.6	3.1	4.5	chr19	9835271	9835334	(48782282)	+	(GGCGGC)n	Simple_repeat	1	66	(0)	1818235
395	8.5	5.8	0.7	chr19	11464568	11465401	(47152215)	+	(AC)n	Simple_repeat	1	876	(0)	1822397
2312	7.7	0.0	3.9	chr19	12872611	12872922	(45744694)	+	AluSq2	SINE/Alu	1	300	(13)	1825424
13	23.2	2.1	2.1	chr19	14406282	14406328	(44211288)	+	(GCCCC)n	Simple_repeat	1	48	(0)	1829423
1240	22.0	4.4	0.7	chr19	16828935	16829240	(41788376)	C	MER58B	DNA/hAT-Charlie	(0)	341	24	1834920
12	15.9	5.7	0.0	chr19	18204228	18204262	(40413354)	+	(CCGCCT)n	Simple_repeat	1	37	(0)	1838360
352	23.9	0.0	12.1	chr19	19134625	19134669	(39482947)	+	L1MA10	LINE/L1	6287	6326	(8)	1840326
12	4.1	3.5	6.7	chr19	38402967	38402995	(20214621)	+	(GGGGC)n	Simple_repeat	1	30	(0)	1866578
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
12	9.1	4.2	0.0	chr19	45526464	45526487	(13091129)	+	(AGGA)n	Simple_repeat	1	25	(0)	1881542
22	11.4	8.1	5.0	chr19	45934841	45934914	(12682702)	+	G-rich	Low_complexity	1	80	(0)	1882621
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
13	15.4	2.5	4.9	chr19	49534118	49534157	(9083459)	+	G-rich	Low_complexity	1	41	(0)	1891317
380	36.2	3.2	0.0	chr19	49676362	49676513	(8941103)	C	L2b	LINE/L2	(219)	3156	3000	1891671
13	22.7	4.3	0.0	chr19	50203332	50203377	(8414239)	+	(CCTCGCG)n	Simple_repeat	1	48	(0)	1892963
14	14.9	5.4	0.0	chr19	50329090	50329126	(8288490)	+	G-rich	Low_complexity	1	39	(0)	1893281
11	9.4	11.8	0.0	chr19	50329213	50329246	(8288370)	+	G-rich	Low_complexity	1	38	(0)	1893282
18	17.7	2.1	4.0	chr19	50658137	50658185	(7959431)	+	G-rich	Low_complexity	1	48	(0)	1894034
16	10.7	2.1	8.2	chr19	52269298	52269345	(6348271)	+	(ATTTTA)n	Simple_repeat	1	49	(0)	1897144
14	18.2	0.0	4.9	chr19	52269521	52269561	(6348055)	+	(GGCCC)n	Simple_repeat	1	41	(0)	1897145
13	8.1	0.0	6.7	chr19	52962932	52962961	(5654655)	+	(GGGCG)n	Simple_repeat	1	30	(0)	1898549
15	8.1	0.0	3.6	chr19	53942310	53942337	(4675279)	+	(CTC)n	Simple_repeat	1	28	(0)	1900625
223	33.1	10.8	0.0	chr19	55063369	55063525	(3554091)	+	MIRb	SINE/MIR	36	211	(57)	1902919
16	21.6	0.0	0.0	chr19	55166913	55166944	(3450672)	+	(T)n	Simple_repeat	1	32	(0)	1903140
11	29.2	3.7	0.0	chr19	55354112	55354165	(3263451)	+	(CCCCTA)n	Simple_repeat	1	56	(0)	1903563
13	20.0	2.0	5.8	chr19	55461724	55461774	(3155842)	+	(CTCTGC)n	Simple_repeat	1	52	(0)	1903780
154	38.9	3.3	1.6	chr2	3110058	3110972	(239082557)	+	(GT)n	Simple_repeat	1	945	(0)	1914076
17	20.2	6.1	2.9	chr2	10812723	10812788	(231380741)	+	(CCG)n	Simple_repeat	1	70	(0)	1925522
13	20.9	5.0	0.0	chr2	96532300	96532339	(145661190)	+	(TTCT)n	Simple_repeat	1	42	(0)	2052303
230	24.4	7.0	4.0	chr2	96532506	96532631	(145660898)	+	MIR	SINE/MIR	83	220	(48)	2052304
14	28.4	0.0	1.9	chr2	96858252	96858304	(145335225)	+	(GGCGCCG)n	Simple_repeat	1	53	(0)	2052924
3255	24.4	7.6	7.4	chr2	98102619	98104200	(144089329)	C	L1MEf	LINE/L1	(2388)	3758	2161	2054548
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
16	25.4	5.1	2.4	chr2	119544396	119544473	(122649056)	+	(GCGCCG)n	Simple_repeat	1	82	(0)	2085553
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
14	11.9	8.1	0.0	chr2	162344146	162344182	(79849347)	+	(CCTGCA)n	Simple_repeat	1	40	(0)	2145594
316	24.8	0.3	0.0	chr2	173697727	173698462	(68495067)	+	(ATCATC)n	Simple_repeat	1	738	(0)	2162046
12	4.2	0.0	10.0	chr2	200963841	200963870	(41229659)	+	(CCTTT)n	Simple_repeat	1	30	(0)	2199238
24	8.0	2.5	0.0	chr2	219229565	219229604	(22963925)	+	(GGCTC)n	Simple_repeat	1	41	(0)	2227555
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
448	16.1	5.8	2.2	chr2	236593233	236594365	(5599164)	+	(TG)n	Simple_repeat	1	1199	(0)	2255217
13	18.3	2.6	2.5	chr2	239401180	239401218	(2792311)	+	(CCCG)n	Simple_repeat	1	40	(0)	2258868
609	24.3	8.0	0.0	chr20	31952219	31952391	(32491776)	C	L2a	LINE/L2	(17)	3409	3222	2307264
16	14.4	2.5	2.4	chr20	35742239	35742278	(28701889)	+	(ACACAC)n	Simple_repeat	1	41	(0)	2315915
2640	8.6	3.5	0.0	chr20	46684316	46684677	(17759490)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2338216
188	26.5	0.0	3.9	chr20	46684678	46684700	(17759467)	+	L2a	LINE/L2	3401	3423	(3)	2338215
102	27.6	0.4	0.0	chr20	53707419	53707674	(10736493)	+	(AC)n	Simple_repeat	1	257	(0)	2354132
283	24.0	4.5	10.4	chr20	56358503	56358646	(8085521)	C	ORSL-2a	DNA/hAT-Tip100	(180)	162	28	2358871
12	13.2	5.7	2.7	chr20	56358737	56358771	(8085396)	+	G-rich	Low_complexity	1	37	(0)	2358874
149	24.1	3.8	2.4	chr20	61311959	61312432	(3131735)	+	(TG)n	Simple_repeat	1	492	(0)	2367208
30	4.3	6.2	0.0	chr20	62794304	62794351	(1649816)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	2368957
17	29.3	5.9	2.4	chr20	62794409	62794526	(1649641)	+	(CGACCC)n	Simple_repeat	1	125	(0)	2368958
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
63	12.0	5.0	4.8	chr21	31622695	31622854	(15087129)	+	(TCTT)n	Simple_repeat	1	168	(0)	2401762
2061	20.4	7.4	4.9	chr21	31622900	31623500	(15086483)	C	MER77	LTR/ERVL	(15)	685	1	2401763
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
16	22.1	2.1	0.0	chr21	36385368	36385414	(10324569)	+	(GCGCGGC)n	Simple_repeat	1	48	(0)	2409764
627	20.2	6.4	1.0	chr21	41828882	41830735	(4879248)	+	(CA)n	Simple_repeat	1	1973	(0)	2418047
133	15.6	11.9	5.1	chr21	42670034	42670824	(4039159)	+	(TTCACAC)n	Simple_repeat	1	885	(0)	2419161
16	27.3	0.0	4.5	chr21	44455130	44455196	(2254787)	+	(CCCCAC)n	Simple_repeat	1	67	(0)	2421770
21	26.0	0.0	7.1	chr21	44455404	44455502	(2254481)	+	(GCCCC)n	Simple_repeat	1	99	(0)	2421771
12	28.3	1.9	1.9	chr22	17369392	17369444	(33449024)	+	(GCCCCG)n	Simple_repeat	1	54	(0)	2428860
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
18	10.7	4.5	4.3	chr22	19479140	19479183	(31339285)	+	(CCG)n	Simple_repeat	1	46	(0)	2432067
890	26.2	4.1	1.3	chr22	23549952	23552988	(27265480)	+	(CATC)n	Simple_repeat	1	3162	(0)	2438469
197	40.0	1.2	0.8	chr22	25155358	25156012	(25662456)	+	(TG)n	Simple_repeat	1	658	(0)	2441612
28	31.8	3.6	5.4	chr22	27648159	27648389	(23170079)	+	GA-rich	Low_complexity	1	226	(0)	2447194
287	24.8	10.6	0.0	chr22	29581240	29581340	(21237128)	+	MIR3	SINE/MIR	43	155	(53)	2450910
2520	5.2	0.0	0.0	chr22	29581355	29581661	(21236807)	C	AluY	SINE/Alu	(4)	307	1	2450911
63	24.9	1.3	5.1	chr22	45240833	45241075	(5577393)	+	(CGCCC)n	Simple_repeat	1	233	(0)	2483504
14	15.8	6.9	6.5	chr22	46035663	46035734	(4782734)	+	(CCCACGG)n	Simple_repeat	1	77	(0)	2484923
14	7.8	0.0	6.5	chr22	46035780	46035810	(4782658)	+	(GCCCC)n	Simple_repeat	1	31	(0)	2484924
11315	18.1	4.4	3.4	chr3	738836	741286	(197554273)	C	L1M4c	LINE/L1	(3890)	2494	19	2493434
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
25	19.6	2.8	7.3	chr3	14948527	14948633	(183346926)	+	G-rich	Low_complexity	1	110	(0)	2517906
12	23.6	1.8	5.4	chr3	31936183	31936237	(166359322)	+	(TTTTC)n	Simple_repeat	1	56	(0)	2542893
2566	8.8	2.9	6.7	chr3	53197094	53197442	(145098117)	+	THE1C	LTR/ERVL-MaLR	1	350	(25)	2577181
23	22.5	4.5	3.3	chr3	88058915	88059002	(110236557)	+	(CCG)n	Simple_repeat	1	92	(0)	2630311
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
21	3.3	0.0	3.0	chr3	105869047	105869079	(92426480)	+	(CGGGG)n	Simple_repeat	1	33	(0)	2648801
18283	15.8	3.3	1.4	chr3	112146074	112150634	(86144925)	C	L1PA16	LINE/L1	(2748)	4101	15	2657453
19	17.5	0.0	0.0	chr3	138175002	138175034	(60120525)	+	(T)n	Simple_repeat	1	33	(0)	2697100
501	24.9	0.0	5.2	chr3	138175036	138175247	(60120312)	C	L1MEg	LINE/L1	(4473)	1611	1411	2697101
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
18	16.0	0.0	0.0	chr3	170908597	170908631	(27386928)	+	(GCG)n	Simple_repeat	1	35	(0)	2743786
15	21.3	9.2	0.0	chr4	1566738	1566802	(188647753)	+	(GTGGCT)n	Simple_repeat	1	71	(0)	2790307
847	14.4	0.8	0.0	chr4	70840351	70840475	(119374080)	+	AluSx	SINE/Alu	8	133	(179)	2891291
300	25.4	13.4	0.7	chr4	82285194	82285336	(107929219)	+	L1MDb	LINE/L1	533	696	(5713)	2907370
2514	14.5	4.6	0.7	chr4	105737329	105737786	(84476769)	C	L1MA5	LINE/L1	(837)	5306	4830	2939923
12	16.8	0.0	5.4	chr4	141220665	141220701	(48993854)	+	(TTCCTT)n	Simple_repeat	1	37	(0)	2987428
162	20.0	5.3	2.7	chr5	6785463	6785949	(174752310)	+	(TG)n	Simple_repeat	1	513	(0)	3062309
34	0.0	0.0	0.0	chr5	10249898	10249934	(171288325)	+	(A)n	Simple_repeat	1	37	(0)	3066554
17	15.0	4.3	2.1	chr5	57173958	57174003	(124364256)	+	(CTCC)n	Simple_repeat	1	48	(0)	3126300
12	20.8	0.0	2.9	chr5	115169937	115169971	(66368288)	+	G-rich	Low_complexity	1	35	(0)	3206387
13	20.3	7.8	0.0	chr5	115170211	115170261	(66367998)	+	G-rich	Low_complexity	1	55	(0)	3206388
14	19.4	2.3	2.3	chr5	145835254	145835296	(35702963)	+	(CCGCGCG)n	Simple_repeat	1	44	(0)	3251378
171	40.0	0.1	1.1	chr5	149202964	149203338	(32334921)	+	(CAC)n	Simple_repeat	3	374	(0)	3257199
200	32.5	2.5	2.4	chr5	149203339	149203778	(32334481)	+	(CCATCA)n	Simple_repeat	170	948	(0)	3257197
171	40.0	0.1	1.1	chr5	149203418	149203780	(32334479)	+	(CAC)n	Simple_repeat	1	361	(0)	3257200
256	27.1	0.0	0.0	chr5	164575435	164575493	(16962766)	+	L1ME3B	LINE/L1	4820	4878	(1268)	3284170
30	22.1	2.9	4.7	chr5	164575555	164575658	(16962601)	+	GA-rich	Low_complexity	1	107	(0)	3284171
822	28.4	11.4	3.7	chr5	164575669	164576315	(16961944)	+	L1ME3B	LINE/L1	5478	6173	(0)	3284170
12	19.6	0.0	0.0	chr5	177426628	177426656	(4111603)	+	G-rich	Low_complexity	1	29	(0)	3307400
20	31.7	0.0	3.3	chr5	180494108	180494198	(1044061)	+	GA-rich	Low_complexity	1	91	(0)	3312778
15	29.6	2.0	0.0	chr5	180809785	180809833	(728426)	+	(AC)n	Simple_repeat	1	50	(0)	3313277
14	3.9	0.0	9.4	chr6	5260985	5261016	(165544963)	+	(GCCCC)n	Simple_repeat	1	32	(0)	3321767
4138	24.0	6.5	6.2	chr6	12315145	12316810	(158489169)	C	L1ME2	LINE/L1	(2)	7127	5321	3332492
108	28.6	1.3	3.3	chr6	23871899	23872291	(146933688)	+	(CA)n	Simple_repeat	1	398	(0)	3351091
168	13.9	2.1	2.4	chr6	26382583	26382911	(144423068)	+	A-rich	Low_complexity	1	336	(0)	3355153
2564	4.0	1.0	0.3	chr6	28895821	28896121	(141909858)	C	AluY	SINE/Alu	(6)	305	3	3359410
309	30.3	3.6	7.0	chr6	36885543	36885684	(133920295)	+	L2a	LINE/L2	3286	3422	(4)	3373498
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
14	17.1	1.9	7.4	chr6	37169943	37169995	(133635984)	+	(GGCCGG)n	Simple_repeat	1	54	(0)	3374135
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
12	16.9	2.9	2.8	chr6	111873420	111873454	(58932525)	+	(GCT)n	Simple_repeat	1	36	(0)	3476294
1936	8.4	1.4	1.1	chr6	124030089	124030363	(46775616)	+	MER1A	DNA/hAT-Charlie	254	529	(0)	3492514
1929	10.9	4.6	4.3	chr6	145964598	145964900	(24841079)	+	AluSx	SINE/Alu	1	304	(8)	3523418
420	21.1	5.3	2.5	chr6	161411585	161412905	(9393074)	+	(ACTC)n	Simple_repeat	1	1391	(0)	3546646
201	27.3	0.7	1.2	chr6	163356729	163357301	(7448678)	+	(CA)n	Simple_repeat	1	577	(0)	3549326
18	16.6	0.0	7.3	chr6	166627312	166627366	(4178613)	+	(CCCGC)n	Simple_repeat	1	55	(0)	3553462
21849	9.3	2.5	1.2	chr6	166843453	166848910	(3957069)	+	L1PB1	LINE/L1	1292	6866	(1)	3553702
182	23.1	1.4	7.0	chr6	169839922	169840630	(965349)	+	(CCCAC)n	Simple_repeat	1	719	(0)	3556896
3840	19.0	1.5	9.1	chr7	624711	625724	(158720249)	+	L1MC	LINE/L1	2481	3356	(2790)	3558606
2452	8.6	0.3	0.6	chr7	625725	626038	(158719935)	+	AluSq2	SINE/Alu	1	313	(0)	3558607
13	21.9	2.3	2.2	chr7	16646094	16646137	(142699836)	+	G-rich	Low_complexity	1	45	(0)	3582782
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
14	19.7	4.2	2.0	chr7	75914944	75914991	(83430982)	+	(GCCGG)n	Simple_repeat	1	50	(0)	3670900
14	8.5	0.0	3.7	chr7	98106950	98106976	(61238997)	+	(GGC)n	Simple_repeat	1	27	(0)	3701943
14	27.2	3.5	0.0	chr7	103074995	103075051	(56270922)	+	(CGCCC)n	Simple_repeat	1	59	(0)	3712168
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
12	22.1	0.0	0.0	chr7	129434515	129434546	(29911427)	+	(AACGGC)n	Simple_repeat	1	32	(0)	3749137
245	27.4	4.7	0.0	chr7	146448582	146448683	(12897290)	C	L1MD3	LINE/L1	(9)	7986	7880	3775932
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
14419	11.3	1.9	2.7	chr7	152044520	152047094	(7298879)	C	L1MA3	LINE/L1	(1721)	5844	3269	3784466
8654	19.5	5.6	2.5	chr7	156705575	156708111	(2637862)	+	L1M2	LINE/L1	3186	5821	(1741)	3791241
21	21.2	0.0	4.6	chr7	156893190	156893254	(2452719)	+	G-rich	Low_complexity	1	65	(0)	3791500
13	26.4	1.9	1.9	chr7	156893315	156893366	(2452607)	+	G-rich	Low_complexity	1	53	(0)	3791500
198	22.5	2.9	3.3	chr8	42380357	42380804	(102757832)	+	A-rich	Low_complexity	1	443	(0)	3858687
31	3.0	0.0	0.0	chr8	42380805	42380838	(102757798)	+	(AAGG)n	Simple_repeat	1	34	(0)	3858688
198	22.5	2.9	3.3	chr8	42380839	42380974	(102757662)	+	A-rich	Low_complexity	444	581	(0)	3858689
2044	13.2	3.2	0.0	chr9	6681834	6682135	(131712582)	C	AluSz6	SINE/Alu	(0)	312	1	4018486
41	3.3	2.9	5.6	chr9	79170853	79170921	(59223796)	+	(TC)n	Simple_repeat	1	71	(0)	4096843
406	24.8	6.4	0.8	chr9	79170923	79171040	(59223677)	+	MIRb	SINE/MIR	121	245	(23)	4096844
17	29.5	0.0	1.7	chr9	79171041	79171100	(59223617)	+	(GTT)n	Simple_repeat	1	60	(0)	4096845
10049	18.0	5.4	1.1	chr9	79419361	79421761	(58972956)	C	L1MA5	LINE/L1	(810)	6909	4337	4097233
387	26.4	5.7	5.7	chr9	79531443	79531619	(58863098)	C	MER104	DNA/TcMar-Tc2	(3)	178	2	4097390
7712	7.0	3.2	0.3	chr9	79733830	79734970	(58659747)	+	L1P3	LINE/L1	2572	3746	(2400)	4097667
1390	27.5	4.4	3.6	chr9	79905963	79906682	(58488035)	+	L1MEd	LINE/L1	571	1296	(5790)	4097908
745	23.8	7.2	0.0	chr9	79930733	79930913	(58463804)	+	MIR	SINE/MIR	7	201	(61)	4097949
14	18.5	0.0	0.0	chr9	85941188	85941218	(52453499)	+	(GGC)n	Simple_repeat	1	31	(0)	4107037
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
16	10.6	10.3	5.3	chr9	127225239	127225306	(11169411)	+	(GCCCGA)n	Simple_repeat	1	75	(0)	4177820
12	19.5	2.1	6.2	chr9	137200755	137200801	(1193916)	+	(GCC)n	Simple_repeat	1	48	(0)	4195340
20	13.7	0.0	0.0	chrX	41333712	41333743	(114707152)	+	(A)n	Simple_repeat	1	32	(0)	4424166
14	17.3	5.1	0.0	chrX	48801964	48802002	(107238893)	+	(GGCGGA)n	Simple_repeat	1	41	(0)	4436866
39	43.0	3.4	0.9	chrX	68937534	68937943	(87102952)	+	(TGGTAA)n	Simple_repeat	1	424	(0)	4457270
7628	18.5	2.4	1.6	chrX	73717601	73719265	(82321630)	C	L1PA10	LINE/L1	(1884)	5694	4016	4464684
60	2.6	1.1	5.6	chrX	103065715	103065802	(52975093)	+	(TTC)n	Simple_repeat	1	89	(0)	4498006
30	10.3	3.7	1.8	chrX	103065803	103065856	(52975039)	+	(CT)n	Simple_repeat	1	56	(0)	4498007
55	0.0	0.0	0.0	chrX	103066004	103066050	(52974845)	+	(TG)n	Simple_repeat	1	47	(0)	4498008
3474	25.8	6.9	6.5	chrX	114478757	114480159	(41560736)	+	L1MC5a	LINE/L1	1	1337	(1440)	4514142
4976	23.8	3.2	7.7	chrX	124169408	124169610	(31871285)	C	L1M4	LINE/L1	(2948)	3198	2995	4528170
2057	26.9	9.1	1.4	chrX	124169631	124170353	(31870542)	+	L1ME1	LINE/L1	5287	6072	(107)	4528175
15	19.4	0.0	4.4	chrX	149540682	149540726	(6500169)	+	(CCCTTC)n	Simple_repeat	1	45	(0)	4564765
12	28.2	0.0	2.2	chrX	149938720	149938778	(6102117)	+	GA-rich	Low_complexity	1	57	(0)	4565177
13	26.0	1.3	7.5	chrX	149940246	149940324	(6100571)	+	G-rich	Low_complexity	1	80	(0)	4565180
172	17.9	0.6	3.0	chrX	153776469	153776834	(2264061)	+	G-rich	Low_complexity	1	368	(0)	4570730
13	22.1	3.1	6.0	chrX	154478910	154478936	(1561959)	+	(CCGCGT)n	Simple_repeat	5	67	(0)	4571913