14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
777	26.7	11.2	2.3	chr1	1943716	1944106	(247012316)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	69	2643
291	36.4	6.6	1.1	chr1	2468741	2468926	(246487496)	+	MIRb	SINE/MIR	35	231	(37)	3257
196	32.2	2.2	1.7	chr1	3257924	3258032	(245698390)	C	L2b	LINE/L2	(18)	3408	3299	3863
15	14.9	2.6	2.5	chr1	3502203	3502241	(245454181)	+	G-rich	Low_complexity	1	40	(0)	4063
760	28.4	17.8	4.0	chr1	3968661	3969080	(244987342)	C	LTR16E2	LTR/ERVL	(25)	543	33	4646
1302	27.5	7.8	0.8	chr1	3986827	3987339	(244969083)	C	MLT1E1A	LTR/ERVL-MaLR	(128)	552	1	4675
365	33.3	0.0	0.0	chr1	5001591	5001710	(243954712)	+	L2b	LINE/L2	3247	3366	(9)	6093
1361	9.5	0.0	9.1	chr1	5198626	5198845	(243757577)	C	MER107	DNA/hAT-Charlie	(0)	200	1	6398
322	24.8	3.1	1.4	chr1	6161946	6162055	(242794367)	+	MIRc	SINE/MIR	39	151	(117)	7757
14	17.8	0.0	2.9	chr1	6393307	6393340	(242563082)	+	(GGC)n	Simple_repeat	1	34	(0)	8132
279	30.3	2.9	1.0	chr1	7002807	7002906	(241953516)	C	L3	LINE/CR1	(1192)	2907	2806	9255
221	26.6	16.8	3.1	chr1	7046552	7046648	(241909774)	C	L2c	LINE/L2	(6)	3381	3269	9318
353	25.7	8.4	5.5	chr1	7075272	7075477	(241880945)	C	MER112	DNA/hAT-Charlie	(35)	226	15	9358
429	27.1	1.6	2.4	chr1	7595577	7595701	(241360721)	C	MIR	SINE/MIR	(35)	227	104	10050
479	29.1	3.0	14.4	chr1	7615813	7616041	(241340381)	+	MIRc	SINE/MIR	64	265	(3)	10068
411	23.3	19.6	5.7	chr1	7863738	7864106	(241092316)	C	MLT1H	LTR/ERVL-MaLR	(6)	543	111	10449
809	16.1	4.0	12.3	chr1	7864114	7864281	(241092141)	C	MLT1B	LTR/ERVL-MaLR	(7)	383	232	10450
804	28.0	12.1	6.0	chr1	9224628	9225200	(239731222)	+	L2a	LINE/L2	2782	3407	(19)	13191
400	29.8	8.7	8.7	chr1	9630437	9630707	(239325715)	C	L2b	LINE/L2	(0)	3375	3104	14022
1261	26.9	13.0	5.4	chr1	10489281	10490010	(238466412)	C	L1ME2	LINE/L1	(5562)	838	38	15911
204	25.0	21.3	0.0	chr1	11053377	11053472	(237902950)	+	MIRb	SINE/MIR	76	197	(71)	16938
14	20.2	0.0	0.0	chr1	11194607	11194640	(237761782)	+	(CAAGGA)n	Simple_repeat	1	34	(0)	17189
2658	3.9	0.0	0.3	chr1	11635643	11635949	(237320473)	C	AluY	SINE/Alu	(5)	306	1	18121
36	2.7	0.0	0.0	chr1	11858855	11858892	(237097530)	+	(GCT)n	Simple_repeat	1	38	(0)	18578
291	31.5	3.2	10.2	chr1	11860550	11860715	(237095707)	C	MIR	SINE/MIR	(96)	166	13	18581
565	29.5	9.3	2.8	chr1	14489880	14490168	(234466254)	C	L1ME4a	LINE/L1	(419)	5705	5396	23280
320	27.2	7.3	4.3	chr1	14867473	14867587	(234088835)	+	MIR	SINE/MIR	83	191	(71)	24037
208	30.4	5.1	15.8	chr1	15289288	15289350	(233667072)	C	L2a	LINE/L2	(247)	3128	3074	24939
410	31.7	8.0	3.6	chr1	17184044	17184292	(231772130)	+	MIRb	SINE/MIR	5	265	(3)	28867
607	28.6	4.2	4.7	chr1	17831876	17832066	(231124356)	+	MIRb	SINE/MIR	15	204	(58)	30317
285	24.2	7.5	3.9	chr1	18011091	18011193	(230945229)	+	L2c	LINE/L2	3277	3383	(4)	30736
258	31.4	2.6	11.1	chr1	18062200	18062407	(230894015)	+	L2a	LINE/L2	3199	3388	(38)	30846
621	32.2	9.4	6.1	chr1	18255653	18256379	(230700043)	+	L2c	LINE/L2	2525	3285	(102)	31254
385	37.9	3.8	0.0	chr1	18337732	18337908	(230618514)	C	MIRc	SINE/MIR	(0)	268	85	31427
229	27.4	7.5	5.3	chr1	18337989	18338119	(230618303)	C	MIRb	SINE/MIR	(40)	228	95	31428
270	26.1	3.0	2.3	chr1	19809263	19809395	(229147027)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	429	34546
987	29.7	12.1	6.5	chr1	20285885	20286389	(228670033)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	13	35445
19	16.4	2.4	0.0	chr1	20371712	20371753	(228584669)	+	(TCTTTT)n	Simple_repeat	1	43	(0)	35624
641	27.1	4.4	1.4	chr1	20439362	20439582	(228516840)	C	MLT1K	LTR/ERVL-MaLR	(165)	430	203	35780
364	34.2	6.2	3.2	chr1	21337627	21337889	(227618533)	C	MIRb	SINE/MIR	(0)	268	2	37703
36	16.8	2.4	1.2	chr1	21509279	21509360	(227447062)	+	G-rich	Low_complexity	1	84	(0)	38048
613	24.0	18.5	0.7	chr1	21534881	21535122	(227421300)	+	L2a	LINE/L2	3139	3423	(3)	38106
430	30.8	9.4	2.6	chr1	21594420	21594646	(227361776)	C	MIR	SINE/MIR	(18)	244	1	38258
13	16.5	5.9	3.7	chr1	21594668	21594718	(227361704)	+	G-rich	Low_complexity	1	54	(0)	38259
250	29.7	0.0	0.0	chr1	21604731	21604794	(227351628)	+	L2b	LINE/L2	3312	3375	(0)	38273
165	15.8	0.7	0.7	chr1	21604795	21605088	(227351334)	+	(GGAT)n	Simple_repeat	1	296	(0)	38274
380	32.0	3.2	0.8	chr1	21648172	21648294	(227308128)	C	MIR3	SINE/MIR	(62)	146	21	38377
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
1072	21.8	4.2	0.4	chr1	22189694	22189923	(226766499)	C	MIR	SINE/MIR	(18)	244	6	39597
790	32.0	5.9	0.3	chr1	22607347	22607684	(226348738)	+	L2	LINE/L2	2607	2964	(455)	40476
435	26.1	1.8	0.9	chr1	23427548	23427659	(225528763)	C	MIR3	SINE/MIR	(7)	201	89	42387
297	31.6	5.4	4.1	chr1	23427780	23427924	(225528498)	+	LTR16E1	LTR/ERVL	160	306	(183)	42388
787	16.3	0.0	5.7	chr1	23673000	23673140	(225283282)	+	FLAM_C	SINE/Alu	3	135	(8)	43064
288	30.6	0.7	9.3	chr1	23673141	23673208	(225283214)	C	L1M5	LINE/L1	(496)	5628	5563	43063
401	26.9	19.3	2.0	chr1	23673238	23673484	(225282938)	C	L2a	LINE/L2	(14)	3412	3113	43065
12	28.6	0.0	5.0	chr1	23791313	23791372	(225165050)	+	G-rich	Low_complexity	1	60	(0)	43381
3191	14.7	11.7	4.5	chr1	23936525	23937195	(225019227)	+	LTR8A	LTR/ERV1	2	727	(0)	43760
2395	9.9	0.0	0.6	chr1	24197432	24197744	(224758678)	C	AluSx	SINE/Alu	(0)	312	2	44357
1141	27.9	10.3	6.8	chr1	24197745	24197942	(224758480)	C	L1ME3G	LINE/L1	(565)	359	156	44355
739	30.3	6.5	5.1	chr1	25104796	25105425	(223850997)	+	L2c	LINE/L2	2743	3380	(7)	46381
364	33.0	8.2	1.4	chr1	25730805	25731019	(223225403)	C	MIRb	SINE/MIR	(36)	232	2	47725
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
582	30.0	10.6	3.7	chr1	26579499	26579744	(222376678)	C	MIRb	SINE/MIR	(3)	265	1	49701
12	12.6	0.0	3.6	chr1	26695918	26695945	(222260477)	+	(CCGC)n	Simple_repeat	1	28	(0)	50001
35	1.7	6.2	4.3	chr1	26695951	26696015	(222260407)	+	(CCCT)n	Simple_repeat	1	69	(0)	50002
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
16	20.3	7.0	2.6	chr1	27625337	27625407	(221331015)	+	(CACTCA)n	Simple_repeat	1	76	(0)	52149
1791	11.6	7.2	0.7	chr1	28148477	28148751	(220807671)	C	AluSz	SINE/Alu	(6)	306	13	53377
16	32.2	1.2	2.5	chr1	28914778	28914857	(220041565)	+	(GGC)n	Simple_repeat	1	81	(0)	55499
3721	11.6	0.6	5.7	chr1	29466001	29466558	(219489864)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	56659
501	30.2	5.1	1.4	chr1	29653724	29653931	(219302491)	+	L2a	LINE/L2	2670	2885	(534)	57035
422	32.1	9.9	3.1	chr1	29949875	29950099	(219006323)	+	MIRb	SINE/MIR	4	245	(23)	57581
355	28.5	12.7	1.2	chr1	29975407	29975573	(218980849)	C	L1ME1	LINE/L1	(1)	6178	5990	57617
48	0.0	0.0	0.0	chr1	30858945	30858985	(218097437)	+	(CA)n	Simple_repeat	1	41	(0)	59245
315	30.9	5.3	1.6	chr1	30859109	30859236	(218097186)	C	L2b	LINE/L2	(5)	3370	3238	59246
30	3.1	0.0	0.0	chr1	31181526	31181558	(217774864)	+	(TCCAAG)n	Simple_repeat	1	33	(0)	60051
252	29.8	13.3	3.9	chr1	31723339	31723467	(217232955)	C	MIRb	SINE/MIR	(34)	234	92	61211
1049	20.2	6.6	2.6	chr1	31723488	31723792	(217232630)	+	MER33	DNA/hAT-Charlie	1	318	(6)	61212
391	28.4	1.7	2.5	chr1	31724024	31724142	(217232280)	C	MIRc	SINE/MIR	(41)	227	110	61213
2689	4.2	0.0	0.7	chr1	32963434	32963743	(215992679)	+	AluSx1	SINE/Alu	1	308	(4)	64112
258	28.9	5.0	3.4	chr1	33140177	33140294	(215816128)	C	MIR3	SINE/MIR	(59)	149	30	64532
305	32.9	3.5	1.4	chr1	34108316	34108457	(214847965)	+	MIRb	SINE/MIR	40	184	(84)	66227
369	29.7	4.3	8.3	chr1	34478623	34478864	(214477558)	+	MLT1I	LTR/ERVL-MaLR	71	302	(109)	66860
398	29.6	0.9	3.6	chr1	34907740	34907851	(214048571)	C	L2c	LINE/L2	(5)	3382	3274	67646
18	6.0	5.4	2.6	chr1	34923685	34923721	(214032701)	+	(CACCCA)n	Simple_repeat	1	39	(0)	67673
15	9.1	0.0	0.0	chr1	35557306	35557329	(213399093)	+	(GGA)n	Simple_repeat	1	24	(0)	68976
43	4.5	0.0	0.0	chr1	35661187	35661232	(213295190)	+	(TG)n	Simple_repeat	1	46	(0)	69172
2056	11.8	1.0	2.0	chr1	35661234	35661537	(213294885)	C	AluJr	SINE/Alu	(9)	303	3	69173
321	26.5	7.3	1.9	chr1	35684701	35684804	(213271618)	C	MIRb	SINE/MIR	(66)	202	93	69235
337	32.5	18.6	0.8	chr1	35882089	35882600	(213073822)	C	L2	LINE/L2	(889)	2530	1907	69698
599	32.0	3.4	5.8	chr1	36092766	36093007	(212863415)	C	MIR	SINE/MIR	(13)	249	14	70117
639	29.4	3.3	8.6	chr1	36803787	36804110	(212152312)	C	L1M5	LINE/L1	(334)	5790	5485	71601
340	29.2	12.7	4.3	chr1	36866347	36866538	(212089884)	+	MIRb	SINE/MIR	8	216	(46)	71704
15	27.8	1.8	3.5	chr1	36925258	36925313	(212031109)	+	(AC)n	Simple_repeat	1	57	(0)	71803
289	34.9	0.0	0.0	chr1	36967080	36967162	(211989260)	C	MIR	SINE/MIR	(174)	88	6	71864
13	24.0	0.0	0.0	chr1	37144040	37144078	(211812344)	+	(CCCCCAA)n	Simple_repeat	1	39	(0)	72200
275	32.6	2.1	0.0	chr1	38076052	38076146	(210880276)	+	MIR3	SINE/MIR	82	178	(30)	74035
269	34.0	3.6	0.0	chr1	38076336	38076441	(210879981)	C	MIRb	SINE/MIR	(6)	262	153	74036
296	24.5	14.8	2.7	chr1	38681094	38681239	(210275183)	+	MIR3	SINE/MIR	15	178	(30)	75139
2429	22.8	6.8	2.9	chr1	40362783	40363506	(208592916)	+	HAL1	LINE/L1	1754	2507	(0)	78678
38	14.9	1.3	1.3	chr1	40654105	40654181	(208302241)	+	(CTCCC)n	Simple_repeat	1	77	(0)	79245
218	29.3	6.1	10.2	chr1	41272579	41272783	(207683639)	C	MamTip2	DNA/hAT-Tip100	(43)	262	67	80469
213	17.4	2.1	0.0	chr1	41272773	41272818	(207683604)	+	L3	LINE/CR1	3895	3941	(158)	80470
17	33.2	2.3	4.5	chr1	41511908	41512038	(207444384)	+	(GTGATG)n	Simple_repeat	1	134	(0)	80947
390	28.2	3.7	5.2	chr1	41516381	41516571	(207439851)	+	L2a	LINE/L2	2485	2672	(747)	80956
426	27.5	8.4	2.2	chr1	41748552	41748719	(207207703)	C	MIR	SINE/MIR	(0)	268	98	81361
509	28.8	14.9	1.8	chr1	41811439	41811664	(207144758)	C	MIR	SINE/MIR	(0)	262	2	81487
13	26.9	1.7	3.4	chr1	41939472	41939529	(207016893)	+	(TCTTTTT)n	Simple_repeat	1	59	(0)	81705
251	26.2	5.6	1.2	chr1	42379834	42379918	(206576504)	C	MER135	DNA	(126)	102	14	82410
2411	9.7	0.0	0.0	chr1	43055493	43055800	(205900622)	C	AluSx	SINE/Alu	(4)	308	1	83682
12	8.4	0.0	6.9	chr1	43055818	43055846	(205900576)	+	(GGTGG)n	Simple_repeat	1	29	(0)	83683
314	27.9	3.7	8.8	chr1	43055882	43055995	(205900427)	C	L2b	LINE/L2	(46)	3329	3222	83684
280	31.3	8.4	0.0	chr1	43056021	43056183	(205900239)	C	L2b	LINE/L2	(256)	3119	2942	83684
952	30.4	12.9	3.9	chr1	43854215	43855046	(205101376)	+	L2	LINE/L2	1889	2807	(612)	85040
340	31.1	4.0	5.1	chr1	43946011	43946186	(205010236)	+	MIRb	SINE/MIR	48	221	(47)	85205
12	24.0	4.5	0.0	chr1	43968350	43968393	(204988029)	+	G-rich	Low_complexity	1	46	(0)	85225
764	30.3	15.6	9.0	chr1	44531691	44532393	(204424029)	C	L3	LINE/CR1	(14)	4085	3328	86211
12	17.5	8.9	0.0	chr1	44719499	44719543	(204236879)	+	(CAGCATG)n	Simple_repeat	1	49	(0)	86560
13	27.9	0.0	0.0	chr1	46472335	46472377	(202484045)	+	(CCCC)n	Simple_repeat	1	43	(0)	90113
248	24.2	11.6	3.9	chr1	47419014	47419116	(201537306)	+	L2b	LINE/L2	3238	3349	(26)	91564
472	31.3	4.7	2.4	chr1	47808620	47808786	(201147636)	C	MIRb	SINE/MIR	(83)	185	15	92342
524	33.9	2.2	0.0	chr1	48531414	48531631	(200424791)	C	L3	LINE/CR1	(45)	4054	3832	93460
2294	10.4	0.7	0.0	chr1	50267848	50268145	(198688277)	+	AluSz	SINE/Alu	1	300	(12)	96446
412	30.3	16.1	0.8	chr1	50279808	50280070	(198676352)	+	L2b	LINE/L2	3055	3365	(10)	96466
12	23.2	0.0	4.5	chr1	51878751	51878794	(197077628)	+	(CCCTCCG)n	Simple_repeat	1	44	(0)	99630
283	30.6	18.8	0.0	chr1	52002566	52002699	(196953723)	C	MIRb	SINE/MIR	(7)	261	97	99938
13	15.2	2.5	4.9	chr1	52365969	52366008	(196590414)	+	(CCGCG)n	Simple_repeat	1	41	(0)	100699
608	33.9	7.2	4.3	chr1	54705303	54705762	(194250660)	C	L2c	LINE/L2	(1)	3386	2913	105709
302	27.7	3.1	2.1	chr1	54804003	54804098	(194152324)	+	MIRb	SINE/MIR	69	165	(103)	105944
409	33.2	10.5	0.4	chr1	55252799	55253046	(193703376)	+	L2	LINE/L2	2799	3074	(345)	106718
776	27.6	8.0	0.4	chr1	57671977	57672220	(191284202)	C	MIRb	SINE/MIR	(0)	268	5	111302
220	28.6	3.1	0.0	chr1	58209731	58209793	(190746629)	C	L2b	LINE/L2	(7)	3419	3355	112394
477	30.0	11.6	2.7	chr1	58460715	58461012	(190495410)	+	Charlie7	DNA/hAT-Charlie	30	357	(2255)	112919
14	13.6	0.0	5.6	chr1	58783956	58783991	(190172431)	+	(CTGG)n	Simple_repeat	1	36	(0)	113506
435	31.4	0.0	6.3	chr1	59357650	59357775	(189598647)	+	L2c	LINE/L2	3254	3371	(4)	114731
22	20.2	7.4	1.1	chr1	63523647	63523727	(185432695)	+	(TCTCTG)n	Simple_repeat	1	87	(0)	122201
544	23.0	5.2	4.8	chr1	63907297	63907477	(185048945)	+	MIRb	SINE/MIR	81	265	(3)	122922
561	13.5	12.6	0.0	chr1	65160894	65160997	(183795425)	C	MLT1A1	LTR/ERVL-MaLR	(289)	119	1	125240
311	29.3	3.9	0.0	chr1	65340032	65340130	(183616292)	C	MIR3	SINE/MIR	(22)	186	84	125618
14985	5.8	0.4	0.1	chr1	66020318	66023035	(182933387)	C	L1PA5	LINE/L1	(3)	6151	3424	126596
242	38.3	11.8	1.1	chr1	74502338	74502519	(174453903)	C	MIRb	SINE/MIR	(61)	207	4	138742
656	32.8	10.7	10.1	chr1	76198335	76199007	(172757415)	C	L2b	LINE/L2	(545)	2874	2172	141083
268	25.1	0.1	3.8	chr1	77036641	77036729	(171919693)	C	MIRb	SINE/MIR	(1)	261	175	142272
473	31.8	12.7	1.8	chr1	77036715	77037057	(171919365)	C	L2a	LINE/L2	(0)	3426	3041	142273
450	30.7	5.3	0.0	chr1	77063343	77063521	(171892901)	C	MARNA	DNA/TcMar-Mariner	(11)	575	387	142310
235	25.0	7.4	6.4	chr1	83637662	83637755	(165318667)	+	MIRc	SINE/MIR	153	247	(21)	151426
520	24.5	10.7	3.7	chr1	83637760	83638011	(165318411)	+	MIRc	SINE/MIR	6	264	(4)	151427
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
183	31.1	10.2	0.9	chr1	93056185	93056291	(155900131)	C	L2	LINE/L2	(1028)	2391	2274	165619
5656	16.4	10.2	27.4	chr1	93433545	93435716	(155520706)	C	MER52A	LTR/ERV1	(0)	1755	1	166296
229	27.9	1.4	0.0	chr1	94100814	94100881	(154855541)	C	MER3	DNA/hAT-Charlie	(140)	69	1	167281
15	14.8	9.3	1.7	chr1	98120093	98120146	(150836276)	+	(TATAT)n	Simple_repeat	1	59	(0)	172975
931	29.8	12.6	0.7	chr1	99696378	99696842	(149259580)	C	LTR16E1	LTR/ERVL	(13)	525	1	175200
362	25.0	5.5	0.9	chr1	99696843	99696947	(149259475)	+	MIRb	SINE/MIR	84	193	(75)	175201
25	24.6	0.0	0.0	chr1	101996930	101996989	(146959433)	+	(AGC)n	Simple_repeat	1	60	(0)	178764
15	17.7	2.0	5.9	chr1	103107243	103107318	(145849104)	+	(TCCC)n	Simple_repeat	1	73	(0)	180087
13557	15.5	2.0	0.6	chr1	104390019	104392924	(144563498)	+	L1MA3	LINE/L1	1207	4159	(3406)	181645
43827	18.2	0.8	1.6	chr1	104460226	104468198	(144488224)	C	HERVE_a-int	LTR/ERV1	(0)	7847	1	181727
10751	10.9	1.2	1.3	chr1	106184097	106185677	(142770745)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	183757
780	27.7	7.8	5.0	chr1	107102714	107103197	(141853225)	+	L1ME5	LINE/L1	5700	6194	(0)	184966
22	16.6	0.0	2.0	chr1	107140111	107140159	(141816263)	+	(AGCAGC)n	Simple_repeat	1	49	(0)	185027
1663	16.8	5.0	0.3	chr1	107939312	107939598	(141016824)	+	Tigger5	DNA/TcMar-Tigger	1	301	(2105)	186098
1084	14.6	6.2	0.5	chr1	109478696	109478908	(139477514)	C	L1ME2z	LINE/L1	(10)	6434	6209	188666
286	33.3	7.1	1.2	chr1	110238343	110238515	(138717907)	+	L2c	LINE/L2	2211	2394	(1025)	189776
302	24.6	8.1	0.7	chr1	110238512	110238626	(138717796)	C	L2a	LINE/L2	(1)	3425	3258	189777
2239	11.0	0.0	0.0	chr1	110542530	110542839	(138413583)	+	AluSx1	SINE/Alu	1	310	(2)	190340
60	5.5	0.0	0.0	chr1	110620034	110620109	(138336313)	+	(GA)n	Simple_repeat	1	76	(0)	190477
12	8.6	13.5	0.0	chr1	110637577	110637613	(138318809)	+	G-rich	Low_complexity	1	42	(0)	190507
1929	20.4	11.3	1.2	chr1	110876789	110877305	(138079117)	C	L1MC4	LINE/L1	(18)	8024	7449	190847
292	29.2	1.4	0.0	chr1	111755188	111755259	(137201163)	C	L2a	LINE/L2	(1018)	2401	2329	192020
266	28.4	2.7	0.6	chr1	111865163	111865254	(137091168)	C	MIRb	SINE/MIR	(4)	258	167	192214
306	30.2	2.5	3.2	chr1	112172555	112172677	(136783745)	C	MLT1J-int	LTR/ERVL-MaLR	(239)	1148	1027	192676
251	25.4	4.3	0.0	chr1	112517587	112517653	(136438769)	+	L2c	LINE/L2	3291	3360	(27)	193243
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
190	33.5	14.8	6.4	chr1	113013857	113014008	(135942414)	C	L3	LINE/CR1	(17)	4082	3911	194271
306	14.6	1.8	0.0	chr1	113014032	113014086	(135942336)	C	L3	LINE/CR1	(261)	3838	3783	194271
291	26.9	9.7	0.0	chr1	114156786	114156878	(134799544)	+	MIR3	SINE/MIR	100	202	(6)	196147
455	31.9	1.6	4.7	chr1	115060654	115060844	(133895578)	C	L2a	LINE/L2	(0)	3426	3242	197632
290	27.6	13.6	2.3	chr1	115469958	115470087	(133486335)	+	L2a	LINE/L2	3280	3426	(0)	198233
15	15.1	5.4	0.0	chr1	116379384	116379420	(132577002)	+	(CTG)n	Simple_repeat	1	39	(0)	199618
19	14.4	0.0	0.0	chr1	145280999	145281039	(103675383)	+	(G)n	Simple_repeat	1	41	(0)	210763
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
32	27.1	7.1	3.3	chr1	145451778	145452001	(103504421)	+	GA-rich	Low_complexity	1	240	(0)	210976
496	25.4	8.8	0.0	chr1	147451586	147451719	(101504703)	+	MIR	SINE/MIR	106	252	(10)	214090
216	33.3	4.2	0.0	chr1	147451871	147451960	(101504462)	C	MIR3	SINE/MIR	(2)	206	113	214091
2409	8.7	0.0	0.3	chr1	150160188	150160486	(98795936)	+	AluSq2	SINE/Alu	2	299	(14)	218430
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
14	0.0	0.0	4.5	chr1	152904770	152904791	(96051631)	+	(TTA)n	Simple_repeat	1	22	(0)	223380
295	11.8	0.0	0.0	chr1	153422594	153422644	(95533778)	C	Alu	SINE/Alu	(10)	291	241	224042
1756	8.2	0.0	0.4	chr1	153452662	153452893	(95503529)	+	AluSx3	SINE/Alu	81	311	(0)	224100
254	35.9	6.5	1.4	chr1	154870660	154870806	(94085616)	C	MIRb	SINE/MIR	(23)	245	91	226925
18	26.1	0.0	4.6	chr1	156282735	156282799	(92673623)	+	(CCG)n	Simple_repeat	1	65	(0)	229845
30	25.3	3.2	0.0	chr1	156652289	156652382	(92304040)	+	GA-rich	Low_complexity	1	97	(0)	230526
1120	33.9	16.3	1.6	chr1	156679841	156680750	(92275672)	+	L3	LINE/CR1	2627	3695	(404)	230557
2074	13.9	0.3	1.9	chr1	156893059	156893194	(92063228)	C	AluJb	SINE/Alu	(175)	137	1	230942
269	26.9	7.6	1.9	chr1	156893362	156893505	(92062917)	C	MIR	SINE/MIR	(116)	152	4	230944
407	26.3	3.9	5.7	chr1	157585903	157586112	(91370310)	+	MamRep605	LTR?	92	297	(552)	231919
620	25.8	8.2	5.5	chr1	159935640	159935877	(89020545)	C	MIRb	SINE/MIR	(22)	246	2	234968
1163	32.4	7.7	0.0	chr1	160373583	160374026	(88582396)	+	L3	LINE/CR1	3605	4085	(14)	235646
738	24.7	12.6	5.4	chr1	160673397	160673674	(88282748)	C	LTR78B	LTR/ERV1	(498)	798	498	236101
12	25.5	0.0	0.0	chr1	161726750	161726786	(87229636)	+	(CGCGG)n	Simple_repeat	1	37	(0)	237995
359	32.7	2.2	4.3	chr1	162641076	162641235	(86315187)	+	MIRb	SINE/MIR	9	162	(106)	239531
323	27.7	17.0	0.6	chr1	166128361	166128569	(82827853)	+	MIRc	SINE/MIR	2	253	(15)	244843
1656	27.7	11.7	0.9	chr1	173044737	173045264	(75911158)	C	L2	LINE/L2	(616)	2803	2212	255038
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
2326	10.4	0.3	0.0	chr1	174598049	174598347	(74358075)	+	AluSc	SINE/Alu	1	300	(9)	257437
8712	15.1	4.0	3.5	chr1	174598348	174599954	(74356468)	C	L1M1	LINE/L1	(3414)	4145	2523	257436
230	36.8	3.4	0.7	chr1	175557453	175557568	(73398854)	C	L3	LINE/CR1	(37)	4062	3944	258859
6460	1.1	0.0	0.1	chr1	175557569	175558285	(73398137)	+	L1PA2	LINE/L1	5440	6155	(0)	258860
886	31.2	12.7	3.1	chr1	175690197	175691113	(73265309)	C	L2a	LINE/L2	(12)	3414	2389	259057
203	36.0	10.0	0.0	chr1	175691160	175691384	(73265038)	C	L2a	LINE/L2	(1188)	2231	1982	259057
239	35.8	5.6	1.3	chr1	175725632	175725784	(73230638)	C	L2b	LINE/L2	(657)	2762	2603	259107
273	21.8	16.1	0.0	chr1	175725793	175725870	(73230552)	+	L2a	LINE/L2	3291	3383	(43)	259101
700	24.8	14.5	14.0	chr1	176102426	176102449	(72853973)	+	MER21C	LTR/ERVL	123	141	(797)	259705
4408	12.5	1.7	1.9	chr1	176102450	176103141	(72853281)	+	LTR8	LTR/ERV1	1	691	(0)	259706
71	28.3	4.3	2.4	chr1	180242238	180242564	(68713858)	+	(TGTATG)n	Simple_repeat	1	341	(0)	266095
310	32.3	19.1	5.2	chr1	182028926	182029560	(66926862)	+	L2b	LINE/L2	2539	3298	(77)	268744
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
18	23.7	0.0	6.8	chr1	183472319	183472363	(65484059)	+	(CCCTCT)n	Simple_repeat	1	70	(0)	271188
17	18.8	0.0	0.0	chr1	183472364	183472394	(65484028)	+	(C)n	Simple_repeat	1	31	(0)	271189
21	22.2	1.3	5.3	chr1	185317244	185317318	(63639104)	+	(GCC)n	Simple_repeat	1	76	(0)	274052
404	26.0	25.7	0.3	chr1	185560815	185561173	(63395249)	+	LTR33	LTR/ERVL	41	504	(11)	274453
254	32.9	21.4	0.0	chr1	186102491	186102648	(62853774)	C	MIR	SINE/MIR	(61)	201	1	275160
285	36.0	2.4	6.1	chr1	186102674	186102886	(62853536)	+	L3	LINE/CR1	3892	4096	(3)	275161
12771	14.8	4.1	2.1	chr1	188224630	188228810	(60727612)	C	L1MA3	LINE/L1	(1962)	5603	1340	278045
1026	33.4	2.1	1.6	chr1	188228813	188229192	(60727230)	C	LTR16C	LTR/ERVL	(26)	463	82	278046
4765	22.0	7.3	5.4	chr1	188499642	188500000	(60456422)	+	THE1-int	LTR/ERVL-MaLR	942	1288	(292)	278385
467	29.6	8.1	1.4	chr1	194568690	194568908	(54387514)	+	HAL1	LINE/L1	1734	1968	(539)	286297
2165	18.9	2.5	2.0	chr1	194889197	194889639	(54066783)	+	MER52D	LTR/ERV1	633	1077	(1046)	286727
18	20.1	3.6	3.5	chr1	198557099	198557153	(50399269)	+	(TG)n	Simple_repeat	1	57	(0)	291375
26	0.0	0.0	0.0	chr1	199333286	199333310	(49623112)	+	(GTTTT)n	Simple_repeat	1	25	(0)	292381
1715	13.3	5.6	5.0	chr1	199333380	199333680	(49622742)	+	AluJr	SINE/Alu	1	303	(9)	292382
977	15.2	0.0	0.0	chr1	200496922	200497053	(48459369)	C	FLAM_C	SINE/Alu	(11)	132	1	294374
237	24.0	2.0	0.0	chr1	200497099	200497148	(48459274)	+	MER58D	DNA/hAT-Charlie	1	51	(335)	294375
537	16.1	0.0	0.0	chr1	200497161	200497241	(48459181)	+	MER58B	DNA/hAT-Charlie	260	340	(1)	294376
422	21.8	10.6	0.9	chr1	202689533	202689643	(46266779)	+	MIRb	SINE/MIR	63	185	(83)	298315
749	6.8	0.0	3.7	chr1	202692991	202693097	(46263325)	C	L1PB1	LINE/L1	(1)	6150	6048	298322
2530	15.0	2.8	0.7	chr1	202693763	202694179	(46262243)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	298323
13121	17.9	5.4	3.3	chr1	202933973	202935171	(46021251)	C	L1MA2	LINE/L1	(2452)	3694	2358	298775
473	22.9	0.0	16.5	chr1	203220088	203220202	(45736220)	C	L2a	LINE/L2	(3)	3423	3289	299244
454	25.4	2.4	2.4	chr1	203220195	203220319	(45736103)	+	MIRb	SINE/MIR	102	226	(42)	299245
1032	17.8	9.9	0.0	chr1	204647753	204647988	(44308434)	+	MER33	DNA/hAT-Charlie	5	266	(58)	301978
227	26.4	1.9	0.0	chr1	204648028	204648080	(44308342)	+	MIRb	SINE/MIR	32	85	(183)	301979
498	29.9	4.9	6.6	chr1	204803699	204803984	(44152438)	+	L2c	LINE/L2	3097	3366	(9)	302294
339	34.5	18.5	2.1	chr1	205243413	205245062	(43711360)	C	L2c	LINE/L2	(629)	2790	790	303066
1236	13.4	12.2	0.0	chr1	205487973	205488174	(43468248)	C	MER30	DNA/hAT-Charlie	(0)	230	1	303538
188	26.3	0.0	3.4	chr1	207074355	207074413	(41882009)	+	MIR3	SINE/MIR	49	105	(103)	306163
210	34.0	16.1	0.8	chr1	209241460	209241712	(39714710)	+	L3b	LINE/CR1	4972	5214	(18)	309354
21	8.8	0.0	2.6	chr1	209937687	209937724	(39018698)	+	(CAAAA)n	Simple_repeat	1	38	(0)	310410
47	0.0	0.0	0.0	chr1	210733950	210733989	(38222433)	+	(CA)n	Simple_repeat	1	40	(0)	311593
218	25.3	17.6	1.3	chr1	211814511	211814586	(37141836)	C	MIRb	SINE/MIR	(3)	265	175	313441
21	28.1	3.9	4.4	chr1	212432907	212433036	(36523386)	+	(GCCCTG)n	Simple_repeat	1	135	(0)	314490
280	31.0	4.7	1.5	chr1	212980015	212980155	(35976267)	+	MER20B	DNA/hAT-Charlie	54	202	(17)	315534
190	23.1	0.0	0.0	chr1	212980177	212980215	(35976207)	+	MIR3	SINE/MIR	163	201	(7)	315532
271	28.1	10.9	1.7	chr1	218262398	218262513	(30693909)	+	MIRb	SINE/MIR	1	128	(140)	322957
251	36.2	10.9	1.7	chr1	221031455	221031687	(27924735)	+	MamSINE1	SINE/tRNA-RTE	19	275	(15)	327062
210	31.8	12.1	5.1	chr1	226580549	226580823	(22375599)	+	L2b	LINE/L2	3037	3333	(42)	336149
703	29.7	3.0	8.9	chr1	226580832	226581290	(22375132)	C	MLT1J1	LTR/ERVL-MaLR	(5)	439	9	336150
281	37.6	3.8	1.1	chr1	226665335	226665514	(22290908)	+	MIRc	SINE/MIR	74	258	(10)	336251
348	29.5	6.2	1.6	chr1	226698127	226698250	(22258172)	+	L2b	LINE/L2	3244	3373	(2)	336305
395	34.6	1.1	2.1	chr1	226966809	226966997	(21989425)	+	Charlie22a	DNA/hAT-Charlie	1	187	(304)	336760
1561	17.9	1.6	4.7	chr1	229430487	229430805	(19525617)	+	AluJr	SINE/Alu	3	311	(1)	340254
374	30.2	21.9	0.5	chr1	231392543	231392738	(17563684)	+	MIR	SINE/MIR	14	259	(3)	343418
245	23.0	2.9	9.9	chr1	232085135	232085245	(16871177)	+	MIRb	SINE/MIR	134	236	(32)	344487
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
522	21.1	12.3	8.2	chr1	234933731	234933924	(14022498)	+	AluJb	SINE/Alu	102	304	(8)	348681
516	24.8	11.8	4.1	chr1	236160915	236161133	(12795289)	C	L1MB8	LINE/L1	(0)	6178	5941	351119
23	22.7	1.6	0.0	chr1	241356738	241356799	(7599623)	+	(GCGCCCG)n	Simple_repeat	1	63	(0)	359175
1243	21.4	14.9	0.3	chr1	244813369	244813700	(4142722)	C	MLT1F1	LTR/ERVL-MaLR	(5)	564	176	364838
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
1314	18.3	14.1	2.8	chr1	247410377	247410696	(1545726)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	47	369128
15	21.2	0.0	4.3	chr10	1048784	1048830	(132748592)	+	(GCCCC)n	Simple_repeat	1	47	(0)	372218
12	19.9	9.6	0.0	chr10	1048949	1049000	(132748422)	+	(CCAGCG)n	Simple_repeat	1	57	(0)	372219
1689	20.1	6.1	5.9	chr10	2867435	2867893	(130929529)	+	MLT1D	LTR/ERVL-MaLR	46	505	(0)	374291
4966	12.7	5.4	3.2	chr10	2963940	2964791	(130832631)	+	MER4D0	LTR/ERV1	1	872	(0)	374416
892	26.3	2.3	8.9	chr10	3313570	3313940	(130483482)	+	L1MD3	LINE/L1	7035	7380	(615)	374923
1310	25.2	10.8	3.2	chr10	4141339	4141776	(129655646)	C	L1MCc	LINE/L1	(5172)	1251	784	376107
429	29.9	3.4	0.0	chr10	5578548	5578691	(128218731)	C	L1MC4a	LINE/L1	(1380)	6502	6354	377951
2805	24.2	5.1	8.2	chr10	5578689	5578928	(128218494)	C	L1ME2	LINE/L1	(4)	6160	5915	377952
82	6.5	6.6	1.7	chr10	6667092	6667258	(127130164)	+	(TA)n	Simple_repeat	1	178	(0)	379869
1114	6.3	1.4	4.0	chr10	6714010	6714158	(127083264)	C	L1PA11	LINE/L1	(3)	6171	6027	379946
16	9.6	0.0	0.0	chr10	7410733	7410755	(126386667)	+	(T)n	Simple_repeat	1	23	(0)	380966
30	14.4	5.6	1.3	chr10	7410927	7411024	(126386398)	+	(CTCG)n	Simple_repeat	1	102	(0)	380967
555	29.8	9.1	8.2	chr10	9335551	9335865	(124461557)	+	L2c	LINE/L2	3067	3384	(3)	384115
759	23.0	12.1	1.4	chr10	13340848	13341134	(120456288)	+	MER33	DNA/hAT-Charlie	3	324	(0)	390581
373	29.7	7.1	14.6	chr10	13349618	13350063	(120447359)	C	L2	LINE/L2	(801)	2618	2209	390597
21	6.4	0.0	2.9	chr10	14173556	14173590	(119623832)	+	(GAGGAA)n	Simple_repeat	1	35	(0)	392026
408	24.4	3.9	3.3	chr10	14666027	14666160	(119131262)	C	L2a	LINE/L2	(6)	3420	3256	392838
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
218	36.5	8.2	1.9	chr10	16670563	16670721	(117126701)	+	L2	LINE/L2	2342	2511	(908)	396217
2203	11.7	0.0	0.3	chr10	16670775	16671065	(117126357)	C	AluSq2	SINE/Alu	(23)	290	1	396218
2199	12.1	0.3	0.7	chr10	16824516	16824821	(116972601)	C	AluSx1	SINE/Alu	(7)	305	1	396438
1322	15.2	5.7	2.1	chr10	18469023	18469258	(115328164)	+	AluJo	SINE/Alu	57	301	(11)	399163
540	17.2	0.0	4.3	chr10	23826399	23826491	(109970931)	+	AluJr	SINE/Alu	129	217	(95)	407508
15	25.6	0.0	0.0	chr10	25175005	25175046	(108622376)	+	(AGC)n	Simple_repeat	1	42	(0)	409842
325	21.6	2.0	8.5	chr10	28021826	28021931	(105775491)	+	MamTip3	DNA/hAT-Tip100	50	148	(352)	414346
227	33.7	12.3	1.5	chr10	30898987	30899218	(102898204)	+	L2c	LINE/L2	3141	3426	(0)	419527
17	16.7	2.4	2.3	chr10	32056201	32056242	(101741180)	+	(GGC)n	Simple_repeat	1	43	(0)	421235
1083	23.8	2.9	1.9	chr10	48481311	48481580	(85315842)	+	Arthur1C	DNA/hAT-Tip100	88	360	(3)	440595
1675	22.8	4.7	0.7	chr10	48481666	48482358	(85315064)	C	L1M5	LINE/L1	(570)	5609	4885	440596
198	34.0	6.2	0.0	chr10	48724196	48724301	(85073121)	+	L2b	LINE/L2	3255	3367	(8)	440942
12	4.0	0.0	12.1	chr10	49605775	49605807	(84191615)	+	(AGGC)n	Simple_repeat	1	33	(0)	442085
14	19.7	3.3	6.5	chr10	49606261	49606320	(84191102)	+	(CAC)n	Simple_repeat	1	62	(0)	442086
306	25.8	0.0	6.1	chr10	49762596	49762694	(84034728)	+	MIRb	SINE/MIR	130	222	(46)	442268
622	20.3	4.5	0.7	chr10	50625457	50625605	(83171817)	+	MER5A	DNA/hAT-Charlie	16	170	(19)	443661
10514	13.0	1.6	0.4	chr10	55199019	55200630	(78596792)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	449848
294	21.1	17.4	11.2	chr10	58148957	58149116	(75648306)	+	MER5B	DNA/hAT-Charlie	1	172	(6)	453705
741	27.4	9.5	2.7	chr10	59007717	59008050	(74789372)	+	MLT1K	LTR/ERVL-MaLR	231	589	(6)	454925
11	22.5	3.5	5.1	chr10	63521661	63521717	(70275705)	+	(GGCCTG)n	Simple_repeat	1	59	(0)	461938
515	28.2	10.6	3.8	chr10	63554522	63554757	(70242665)	+	MIRc	SINE/MIR	11	264	(4)	461989
1622	22.1	0.3	0.0	chr10	64587226	64587514	(69209908)	C	AluSz6	SINE/Alu	(22)	290	1	463610
227	35.1	7.3	2.4	chr10	67781261	67781467	(66015955)	C	L2b	LINE/L2	(17)	3358	3141	467864
341	31.6	4.4	1.3	chr10	67781440	67781593	(66015829)	C	MIR3	SINE/MIR	(17)	191	33	467865
3687	15.5	0.2	0.7	chr10	70315339	70315943	(63481479)	+	LTR26D	LTR/ERV1	3	604	(0)	473185
2127	11.7	0.0	1.3	chr10	70316117	70316432	(63480990)	C	AluSz	SINE/Alu	(0)	312	1	473186
559	29.4	5.9	4.9	chr10	70324413	70324716	(63472706)	+	MLT1M	LTR/ERVL-MaLR	35	341	(331)	473199
307	30.1	15.7	0.5	chr10	71578344	71578527	(62218895)	C	MamRep564	Unknown	(105)	252	36	475529
183	23.7	0.0	0.0	chr10	71582171	71582208	(62215214)	+	MIR	SINE/MIR	3	40	(222)	475535
1472	16.9	5.2	1.1	chr10	71582216	71582533	(62214889)	+	MER33	DNA/hAT-Charlie	1	315	(9)	475536
1869	26.8	10.0	2.3	chr10	71794617	71795325	(62002097)	+	L1ME5	LINE/L1	5425	6194	(0)	475922
27	3.5	0.0	0.0	chr10	71796041	71796070	(62001352)	+	(AGG)n	Simple_repeat	1	30	(0)	475923
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
438	24.8	2.9	0.0	chr10	73344441	73344541	(60452881)	+	MER81	DNA/hAT-Blackjack	2	105	(9)	479116
319	29.9	5.5	2.8	chr10	73344593	73344733	(60452689)	+	L1ME4c	LINE/L1	288	432	(398)	479117
206	27.7	2.1	0.0	chr10	73407662	73407708	(60389714)	C	L2a	LINE/L2	(16)	3410	3363	479246
19	18.9	2.4	0.0	chr10	73991945	73991991	(59805431)	+	G-rich	Low_complexity	1	48	(0)	480343
43	6.3	0.0	0.0	chr10	73992121	73992170	(59805252)	+	(GT)n	Simple_repeat	1	50	(0)	480344
1547	20.5	2.8	14.5	chr10	76016964	76017487	(57779935)	+	MLT1C	LTR/ERVL-MaLR	4	464	(3)	483942
325	16.0	5.9	3.1	chr10	84186384	84187265	(49610157)	+	(TG)n	Simple_repeat	1	934	(0)	496452
290	16.8	4.8	4.9	chr10	84187266	84187272	(49610150)	+	(TGTGTGG)n	Simple_repeat	1	932	(0)	496453
498	28.0	4.4	0.0	chr10	86203794	86203968	(47593454)	C	MER117	DNA/hAT-Charlie	(8)	189	7	499138
621	24.2	0.0	0.0	chr10	86306874	86307022	(47490400)	C	L1MA10	LINE/L1	(10)	6324	6176	499281
559	26.3	1.4	5.1	chr10	86345880	86346095	(47451327)	+	L2c	LINE/L2	3031	3238	(149)	499344
1972	21.8	11.8	1.2	chr10	86553545	86554027	(47243395)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	20	499730
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
278	31.9	0.0	0.0	chr10	87922587	87922655	(45874767)	+	L2a	LINE/L2	3354	3422	(4)	502004
16	27.6	0.0	1.8	chr10	88880176	88880230	(44917192)	+	(CAGAGG)n	Simple_repeat	1	55	(0)	503504
852	24.7	5.1	14.6	chr10	89900724	89901163	(43896259)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	505141
817	30.3	14.9	1.4	chr10	90352489	90353035	(43444387)	+	L2a	LINE/L2	2785	3422	(4)	505722
1433	23.6	13.9	5.4	chr10	91127647	91128047	(42669375)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	106	506841
258	31.0	1.0	2.0	chr10	92387543	92387644	(41409778)	C	MER5B	DNA/hAT-Charlie	(0)	178	78	509002
423	33.0	10.8	5.6	chr10	93121530	93122270	(40675152)	+	L2b	LINE/L2	2593	3385	(2)	510490
419	32.5	8.1	4.9	chr10	93719206	93719529	(40077893)	C	L2c	LINE/L2	(3)	3384	3050	511665
202	39.8	7.9	1.9	chr10	94066642	94067010	(39730412)	+	L2a	LINE/L2	1158	1550	(1869)	512313
509	30.6	11.2	10.6	chr10	95277665	95278061	(38519361)	+	L4_C_Mam	LINE/RTE-X	3370	3804	(1334)	513997
17	0.0	0.0	0.0	chr10	95392265	95392283	(38405139)	+	(A)n	Simple_repeat	1	19	(0)	514196
194	23.3	2.3	0.0	chr10	95411732	95411774	(38385648)	+	L2b	LINE/L2	3315	3358	(17)	514229
585	29.6	2.1	2.1	chr10	96496123	96496315	(37301107)	C	MER117	DNA/hAT-Charlie	(0)	197	5	516078
1715	19.3	3.5	1.9	chr10	96717966	96718334	(37079088)	+	L1MB8	LINE/L1	5804	6178	(0)	516499
11	16.5	5.9	0.0	chr10	96832966	96832999	(36964423)	+	(GAGGTG)n	Simple_repeat	1	36	(0)	516805
318	31.9	11.6	2.6	chr10	96971385	96971608	(36825814)	C	L2c	LINE/L2	(24)	3363	3136	517050
262	23.6	7.0	0.7	chr10	97068037	97068133	(36729289)	+	L2a	LINE/L2	3249	3413	(13)	517194
28	0.0	0.0	0.0	chr10	97068134	97068160	(36729262)	+	(TGAA)n	Simple_repeat	1	27	(0)	517195
358	26.5	3.3	1.7	chr10	97196669	97196787	(36600635)	C	MIR3	SINE/MIR	(25)	183	63	517432
15	22.6	2.1	2.0	chr10	97850128	97850175	(35947247)	+	(CCGC)n	Simple_repeat	1	49	(0)	518875
571	31.9	16.2	1.4	chr10	97960541	97960966	(35836456)	C	L3	LINE/CR1	(822)	3277	2777	519088
3768	20.3	7.8	4.1	chr10	97999025	97999998	(35797424)	+	MER52A	LTR/ERV1	1	1086	(669)	519153
556	35.1	4.6	5.6	chr10	98055420	98056297	(35741125)	C	CR1-3_Croc	LINE/CR1	(829)	2776	1908	519284
223	31.6	5.7	4.0	chr10	98074570	98074712	(35722710)	C	L2a	LINE/L2	(0)	3426	3239	519320
212	34.2	11.6	0.0	chr10	98087456	98087569	(35709853)	C	L2b	LINE/L2	(2)	3373	3245	519345
533	31.8	8.9	2.0	chr10	99331258	99331507	(34465915)	C	L3	LINE/CR1	(21)	4078	3810	521279
194	31.4	11.1	7.3	chr10	100148923	100149320	(33648102)	C	L2b	LINE/L2	(1)	3374	2960	522851
930	22.3	5.1	2.2	chr10	100325060	100325288	(33472134)	C	MER106A	DNA/hAT-Charlie	(0)	236	1	523159
386	23.3	11.9	4.3	chr10	100680702	100680840	(33116582)	+	MIRb	SINE/MIR	102	252	(16)	523795
19	12.4	0.0	0.0	chr10	100859316	100859350	(32938072)	+	(CTCCT)n	Simple_repeat	1	35	(0)	524084
12	19.9	0.0	0.0	chr10	100859452	100859480	(32937942)	+	(CCCTC)n	Simple_repeat	1	29	(0)	524085
18	25.7	5.5	2.1	chr10	100859532	100859622	(32937800)	+	(CCACCAC)n	Simple_repeat	1	96	(0)	524086
18	23.5	6.1	0.0	chr10	101080978	101081043	(32716379)	+	GA-rich	Low_complexity	1	70	(0)	524442
1690	16.4	1.7	0.3	chr10	102040145	102040431	(31756991)	+	L1MC1	LINE/L1	6026	6316	(17)	526147
643	15.4	2.4	0.8	chr10	102461805	102461928	(31335494)	C	MER5B	DNA/hAT-Charlie	(33)	145	20	526970
26	14.1	8.6	0.0	chr10	102918607	102918676	(30878746)	+	(GCGGCT)n	Simple_repeat	1	76	(0)	527859
181	35.1	3.4	0.0	chr10	103265812	103265868	(30531554)	+	L3b	LINE/CR1	5162	5220	(12)	528553
22	20.4	1.7	1.7	chr10	103266040	103266098	(30531324)	+	GA-rich	Low_complexity	1	60	(0)	528554
36	0.0	0.0	0.0	chr10	103278904	103278934	(30518488)	+	(CA)n	Simple_repeat	1	31	(0)	528588
15	20.3	5.9	0.0	chr10	103368447	103368497	(30428925)	+	(CCTCGGCC)n	Simple_repeat	1	54	(0)	528834
314	21.5	0.0	4.4	chr10	104327945	104328012	(29469410)	+	L2c	LINE/L2	3285	3349	(38)	530535
1190	35.5	9.5	4.4	chr10	104750132	104751293	(29046129)	+	L3	LINE/CR1	2748	3975	(124)	531215
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
219	22.0	1.7	1.7	chr10	107144669	107144728	(26652694)	C	AmnSINE1	SINE/5S-Deu-L2	(386)	189	130	534840
381	25.2	17.4	0.0	chr10	110355700	110355822	(23441600)	+	MIR3	SINE/MIR	16	164	(44)	539323
560	31.8	4.5	0.5	chr10	110360820	110361009	(23436413)	C	MIRb	SINE/MIR	(58)	210	13	539336
15	15.9	2.9	0.0	chr10	110872100	110872134	(22925288)	+	G-rich	Low_complexity	1	36	(0)	540304
30	19.3	3.5	2.2	chr10	110919488	110919573	(22877849)	+	G-rich	Low_complexity	1	89	(0)	540372
24	9.6	0.0	6.0	chr10	110919593	110919642	(22877780)	+	GA-rich	Low_complexity	1	50	(0)	540373
634	31.0	10.1	1.8	chr10	111231823	111232095	(22565327)	C	L3	LINE/CR1	(11)	4088	3791	540790
181	33.1	8.0	2.3	chr10	111511868	111511997	(22285425)	+	L2c	LINE/L2	3248	3385	(2)	541225
37	33.4	3.1	1.2	chr10	111512013	111512175	(22285247)	+	GA-rich	Low_complexity	1	168	(0)	541226
305	27.3	10.4	5.5	chr10	112216241	112216368	(21581054)	C	L2b	LINE/L2	(0)	3375	3241	542296
408	21.0	9.8	6.3	chr10	112467685	112467811	(21329611)	C	MIRc	SINE/MIR	(21)	247	116	542727
500	24.3	10.8	7.9	chr10	112467824	112468064	(21329358)	C	L2a	LINE/L2	(5)	3421	3173	542728
327	36.2	12.5	4.4	chr10	119618447	119618761	(14178661)	+	L2b	LINE/L2	3019	3362	(13)	554244
1292	30.6	6.6	3.0	chr10	120608295	120608851	(13188571)	+	MLT1K	LTR/ERVL-MaLR	5	582	(13)	555921
564	19.1	0.0	0.0	chr10	123614488	123614581	(10182841)	+	AluJr	SINE/Alu	204	297	(15)	560614
2384	6.0	0.4	0.0	chr10	123659216	123659496	(10137926)	C	AluSq2	SINE/Alu	(31)	282	1	560700
254	23.9	2.9	1.5	chr10	126508562	126508629	(7288793)	+	MER5A	DNA/hAT-Charlie	101	169	(20)	564931
13	12.6	0.0	3.6	chr10	127801387	127801414	(5996008)	+	(GTT)n	Simple_repeat	1	28	(0)	566650
1812	14.4	4.5	1.0	chr10	129325778	129326076	(4471346)	C	AluJo	SINE/Alu	(1)	311	2	568384
15	13.7	0.0	0.0	chr10	130834272	130834295	(2963127)	+	(T)n	Simple_repeat	1	24	(0)	569941
1209	26.5	18.1	3.2	chr10	131898561	131899878	(1897544)	+	L2a	LINE/L2	1845	3426	(0)	571056
4421	9.9	2.8	0.7	chr11	329237	329833	(134756789)	+	LTR71B	LTR/ERV1	1	610	(0)	573257
11	20.8	0.0	2.9	chr11	1016021	1016055	(134070567)	+	(GGCGTG)n	Simple_repeat	1	35	(0)	574240
13	7.2	3.0	5.9	chr11	1748091	1748123	(133338499)	+	G-rich	Low_complexity	1	34	(0)	575041
20	7.3	6.4	4.0	chr11	3855614	3855660	(131230962)	+	(CGCC)n	Simple_repeat	1	50	(0)	577860
279	20.0	0.0	1.8	chr11	6420770	6420825	(128665797)	C	L2c	LINE/L2	(241)	3146	3092	581297
774	35.1	19.4	4.4	chr11	6420848	6421191	(128665431)	C	L2b	LINE/L2	(0)	3375	2980	581298
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
703	28.9	9.7	8.1	chr11	7272533	7273013	(127813609)	C	L2c	LINE/L2	(4)	3422	2912	582470
441	28.1	9.3	4.8	chr11	8008168	8008373	(127078249)	C	LTR16C	LTR/ERVL	(108)	381	166	583371
224	33.0	6.8	3.5	chr11	8167920	8168032	(126918590)	+	L3	LINE/CR1	3813	3929	(170)	583592
11	21.8	2.2	4.3	chr11	8329260	8329305	(126757317)	+	G-rich	Low_complexity	1	47	(0)	583844
623	31.9	13.3	2.4	chr11	8402903	8403478	(126683144)	+	CR1_Mam	LINE/CR1	1430	2077	(127)	583932
13	15.8	2.7	2.6	chr11	8682939	8682975	(126403647)	+	G-rich	Low_complexity	1	38	(0)	584338
17	8.8	0.0	0.0	chr11	10379081	10379104	(124707518)	+	(T)n	Simple_repeat	1	24	(0)	587472
13	11.2	3.2	3.1	chr11	10379283	10379313	(124707309)	+	(CTTT)n	Simple_repeat	1	32	(0)	587473
364	23.7	0.0	0.1	chr11	10458152	10458236	(124628386)	C	AluSx	SINE/Alu	(26)	107	24	587583
426	26.3	7.1	1.7	chr11	10459385	10459504	(124627118)	C	MIR3	SINE/MIR	(6)	202	76	587586
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
1057	17.3	5.7	0.5	chr11	11550674	11550871	(123535751)	+	MER3	DNA/hAT-Charlie	1	209	(0)	589371
6960	5.2	0.1	0.4	chr11	13289383	13290244	(121796378)	C	L1PA6	LINE/L1	(0)	6154	5299	592146
194	36.4	2.5	0.0	chr11	14270151	14270227	(120816395)	+	MIR3	SINE/MIR	46	124	(84)	593582
304	32.5	8.2	3.6	chr11	17001108	17001300	(118085322)	+	L2c	LINE/L2	3149	3387	(0)	597863
242	31.4	6.8	0.0	chr11	17478335	17478458	(117608164)	+	L1ME4c	LINE/L1	582	714	(116)	598825
12	15.8	0.0	3.3	chr11	17968257	17968286	(117118336)	+	A-rich	Low_complexity	1	30	(0)	599645
780	22.8	4.2	3.0	chr11	17968343	17968431	(117118191)	C	L2a	LINE/L2	(8)	3418	3333	599646
1537	17.7	0.3	6.3	chr11	17968432	17968730	(117117892)	+	AluJr4	SINE/Alu	26	306	(6)	599647
249	27.8	6.5	1.1	chr11	19116558	19116682	(115969940)	C	MIR3	SINE/MIR	(94)	174	36	601650
541	29.0	7.9	3.2	chr11	19344637	19344914	(115741708)	+	L3	LINE/CR1	3788	4079	(20)	602037
14	17.6	2.5	2.4	chr11	19345199	19345238	(115741384)	+	(CGGCAG)n	Simple_repeat	1	41	(0)	602038
419	23.9	0.9	5.2	chr11	20854233	20854347	(114232275)	+	MIR3	SINE/MIR	84	193	(15)	604578
603	24.4	0.0	0.0	chr11	20974077	20974199	(114112423)	+	L2a	LINE/L2	3303	3425	(1)	604766
302	30.5	2.1	0.0	chr11	30228610	30228704	(104857918)	+	L2	LINE/L2	1552	1648	(1771)	618155
246	31.8	4.1	12.1	chr11	30228709	30228876	(104857746)	+	L2-1_AMi	LINE/L2	495	628	(1468)	618156
17	26.6	4.0	1.3	chr11	31987495	31987568	(103099054)	+	(CGCGCCC)n	Simple_repeat	1	77	(0)	620767
528	16.3	16.9	0.0	chr11	32198086	32198208	(102888414)	+	MER63D	DNA/hAT-Blackjack	914	1061	(0)	621162
899	22.2	6.9	0.5	chr11	33501716	33501932	(101584690)	C	MIR	SINE/MIR	(0)	262	31	623632
631	28.2	2.7	2.0	chr11	33587972	33588180	(101498442)	+	MIRb	SINE/MIR	11	227	(41)	623767
195	24.1	4.9	1.7	chr11	33588205	33588263	(101498359)	+	L2c	LINE/L2	3289	3349	(38)	623768
14	14.6	0.0	3.1	chr11	34357915	34357946	(100728676)	+	(GGC)n	Simple_repeat	1	32	(0)	625127
13	20.1	0.0	7.5	chr11	34357947	34357967	(100728655)	+	(GGAGGC)n	Simple_repeat	1	53	(0)	625128
429	19.8	6.7	3.5	chr11	35263002	35263116	(99823506)	C	L2a	LINE/L2	(4)	3422	3304	626475
646	21.4	20.7	0.0	chr11	43358215	43358471	(91728151)	+	MER33	DNA/hAT-Charlie	1	324	(0)	638335
2214	25.4	4.3	4.4	chr11	44493524	44494352	(90592270)	+	ERV3-16A3_I-int	LTR/ERVL	2418	3330	(2337)	640226
305	22.9	10.8	0.0	chr11	45166578	45166660	(89919962)	+	L2b	LINE/L2	3252	3344	(31)	641617
606	26.6	9.2	5.9	chr11	45287402	45287797	(89798825)	C	MLT1H2	LTR/ERVL-MaLR	(2)	577	184	641815
263	23.0	5.1	3.9	chr11	45543874	45543950	(89542672)	+	MIR3	SINE/MIR	69	146	(62)	642329
222	18.7	0.0	9.2	chr11	45544074	45544131	(89542491)	+	MIRc	SINE/MIR	37	92	(116)	642330
344	29.0	3.4	3.3	chr11	45794471	45794636	(89291986)	C	MLT1N2	LTR/ERVL-MaLR	(4)	668	432	642785
21	25.1	1.2	4.8	chr11	45885558	45885642	(89200980)	+	G-rich	Low_complexity	1	81	(0)	642970
263	32.1	11.9	1.4	chr11	45899382	45899523	(89187099)	C	MIRc	SINE/MIR	(52)	216	58	642996
186	23.6	3.5	1.8	chr11	46388581	46388636	(88697986)	C	MIR3	SINE/MIR	(86)	122	66	643873
476	24.0	1.0	3.7	chr11	57406131	57406238	(77680384)	+	L2b	LINE/L2	3271	3375	(0)	653630
290	27.8	8.9	8.9	chr11	60389175	60389320	(74697302)	C	L2c	LINE/L2	(0)	3387	3242	658291
2790	27.1	22.6	2.0	chr11	61306110	61308198	(73778424)	+	L2a	LINE/L2	312	2956	(463)	659901
221	20.7	0.5	0.0	chr11	61832318	61832367	(73254255)	+	MIR3	SINE/MIR	32	84	(184)	660912
1076	30.1	7.9	1.8	chr11	62980187	62980744	(72105878)	+	LTR89	LTR/ERVL?	272	866	(13)	663247
1341	33.1	15.3	3.5	chr11	63593087	63593569	(71493053)	C	L2a	LINE/L2	(22)	3404	2822	663952
196	32.2	1.1	4.4	chr11	63991598	63991688	(71094934)	+	MIRb	SINE/MIR	173	260	(8)	664811
1085	27.8	11.2	0.7	chr11	63991736	63991935	(71094687)	C	L2a	LINE/L2	(4)	3422	3210	664812
267	20.7	3.3	3.3	chr11	64977914	64977973	(70108649)	C	MIRb	SINE/MIR	(8)	260	201	666564
431	30.6	8.5	2.8	chr11	64997275	64997452	(70089170)	+	MIRb	SINE/MIR	16	204	(64)	666617
279	28.2	15.5	2.1	chr11	65003567	65003711	(70082911)	C	MIR3	SINE/MIR	(20)	188	21	666637
21	28.5	0.0	5.3	chr11	65314750	65314843	(69771779)	+	G-rich	Low_complexity	1	94	(0)	667293
204	32.1	5.8	5.8	chr11	65354350	65354435	(69732187)	C	MIRb	SINE/MIR	(59)	209	124	667384
240	25.6	6.0	1.3	chr11	65404176	65404254	(69682368)	+	L2a	LINE/L2	3331	3413	(13)	667481
13	8.5	4.0	0.0	chr11	65500555	65500579	(69586043)	+	(GAAG)n	Simple_repeat	1	26	(0)	667664
12	24.4	0.0	4.3	chr11	66013534	66013580	(69073042)	+	(CCCCCAT)n	Simple_repeat	1	47	(0)	668646
342	22.3	4.6	2.9	chr11	66291335	66291480	(68795142)	C	MIR1_Amn	SINE/MIR	(52)	156	10	669188
193	27.1	13.1	3.6	chr11	66291608	66291745	(68794877)	C	MIR3	SINE/MIR	(36)	172	20	669189
186	25.0	4.2	1.4	chr11	67081518	67081586	(68005036)	C	MIR3	SINE/MIR	(114)	94	24	670895
30	12.0	4.5	2.9	chr11	68121277	68121343	(66965279)	+	(CGG)n	Simple_repeat	1	70	(0)	672798
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
195	29.3	4.5	10.7	chr11	68209245	68209412	(66877210)	C	L2a	LINE/L2	(0)	3426	3270	672974
18	16.8	0.0	5.8	chr11	70649614	70649665	(64436957)	+	G-rich	Low_complexity	1	52	(0)	677153
20	28.3	1.2	3.5	chr11	71929056	71929062	(63157560)	+	(GTGGAG)n	Simple_repeat	1	12	(75)	678991
15	22.5	0.0	2.3	chr11	71929063	71929105	(63157517)	+	(TGG)n	Simple_repeat	1	43	(0)	678992
20	28.3	1.2	3.5	chr11	71929106	71929141	(63157481)	+	(GTGGAG)n	Simple_repeat	13	87	(0)	678991
280	37.1	5.5	3.9	chr11	72107402	72107631	(62978991)	C	L2c	LINE/L2	(226)	3149	2916	679355
54	24.0	2.2	0.0	chr11	72612617	72612753	(62473869)	+	(TGGA)n	Simple_repeat	1	140	(0)	680273
182	28.6	8.7	6.7	chr11	72612930	72613019	(62473603)	+	MIR3	SINE/MIR	114	205	(3)	680274
206	29.4	7.1	0.0	chr11	72613373	72613464	(62473158)	+	MIR3	SINE/MIR	110	208	(0)	680275
307	35.2	14.3	0.9	chr11	72677878	72678251	(62408371)	+	L2	LINE/L2	2521	2951	(468)	680392
14	17.8	5.3	0.0	chr11	72681510	72681547	(62405075)	+	GA-rich	Low_complexity	1	40	(0)	680397
226	31.1	7.0	7.7	chr11	73286536	73286678	(61799944)	C	L3	LINE/CR1	(886)	3213	3072	681558
234	29.4	6.4	1.9	chr11	73286644	73286747	(61799875)	C	L2b	LINE/L2	(4)	3371	3263	681559
20	7.2	0.0	0.0	chr11	73761139	73761168	(61325454)	+	(GCGT)n	Simple_repeat	1	30	(0)	682608
294	31.0	5.6	3.5	chr11	75352555	75352728	(59733894)	+	MIRb	SINE/MIR	84	261	(7)	685859
15	24.1	2.6	0.0	chr11	76724314	76724352	(58362270)	+	GA-rich	Low_complexity	1	40	(0)	688553
473	21.3	17.6	2.6	chr11	76724437	76724590	(58362032)	C	MIRb	SINE/MIR	(16)	252	71	688554
480	31.4	30.6	1.2	chr11	77779863	77780192	(57306430)	+	L2c	LINE/L2	2987	3418	(8)	690582
185	19.2	13.3	3.7	chr11	77780145	77780198	(57306424)	+	OldhAT1	DNA/hAT-Ac	1206	1265	(1583)	690587
16	17.8	6.5	2.0	chr11	78684480	78684525	(56402097)	+	(TC)n	Simple_repeat	1	49	(0)	692451
26	8.8	0.0	0.0	chr11	78684525	78684560	(56402062)	+	(CA)n	Simple_repeat	1	36	(0)	692452
641	27.4	6.4	6.8	chr11	78684621	78684871	(56401751)	+	MIR	SINE/MIR	12	261	(1)	692453
549	31.8	5.9	2.2	chr11	78768445	78768624	(56317998)	+	L2b	LINE/L2	3189	3375	(0)	692629
480	27.5	1.9	3.6	chr11	78861264	78861451	(56225171)	C	MIR3	SINE/MIR	(15)	215	20	692780
812	20.6	0.0	1.2	chr11	79315561	79315722	(55770900)	+	MER5A1	DNA/hAT-Charlie	7	166	(0)	693669
198	31.6	7.1	2.5	chr11	82092959	82093039	(52993583)	C	MIR	SINE/MIR	(13)	249	165	698329
2003	15.9	1.9	0.7	chr11	83293999	83294306	(51792316)	+	AluJo	SINE/Alu	1	312	(0)	700384
119	4.3	2.8	0.0	chr11	84714527	84714670	(50371952)	+	(CTCTTT)n	Simple_repeat	1	148	(0)	702814
278	31.6	1.3	0.0	chr11	88704688	88704763	(46381859)	C	L2a	LINE/L2	(35)	3391	3315	708985
24	20.3	2.0	0.0	chr11	93197514	93197564	(41889058)	+	(CA)n	Simple_repeat	1	52	(0)	715243
438	30.3	10.6	2.1	chr11	93198471	93198659	(41887963)	C	MIRb	SINE/MIR	(35)	233	27	715245
6961	15.8	8.7	9.8	chr11	93772121	93773794	(41312828)	C	MER52D	LTR/ERV1	(0)	2123	470	716144
977	30.9	7.0	7.2	chr11	94281592	94282034	(40804588)	C	MLT1J1	LTR/ERVL-MaLR	(2)	442	1	716911
19184	15.9	2.7	1.5	chr11	97018923	97026939	(38059683)	+	L1MA2	LINE/L1	57	7719	(4)	720788
3678	18.3	4.2	2.1	chr11	102307620	102308435	(32778187)	+	Charlie5	DNA/hAT-Charlie	12	845	(1779)	727731
1617	21.2	0.6	1.9	chr11	103889885	103890110	(31196512)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	143	730085
19	26.0	1.2	4.9	chr11	107018305	107018384	(28068238)	+	(GCC)n	Simple_repeat	1	81	(0)	734325
14	24.0	0.0	0.0	chr11	107018434	107018472	(28068150)	+	(GGCAGA)n	Simple_repeat	1	39	(0)	734326
20	20.3	4.5	5.4	chr11	107018505	107018592	(28068030)	+	(TCCC)n	Simple_repeat	1	92	(0)	734327
20	13.7	1.9	5.5	chr11	107928336	107928409	(27158213)	+	(CCCCCG)n	Simple_repeat	1	71	(0)	735863
2120	26.0	8.8	17.4	chr11	108003101	108003968	(27082654)	+	L2	LINE/L2	892	1771	(1648)	736013
2007	23.9	6.0	2.6	chr11	112627670	112628171	(22458451)	+	MLT1F	LTR/ERVL-MaLR	12	531	(17)	743417
31	0.0	2.4	4.7	chr11	113475291	113475332	(21611290)	+	(GGCGG)n	Simple_repeat	1	43	(0)	744599
248	24.3	1.4	0.0	chr11	113979555	113979624	(21106998)	C	L3	LINE/CR1	(150)	3949	3879	745520
873	27.1	12.9	8.6	chr11	116105393	116106114	(18980508)	+	LTR41B	LTR/ERVL	1	758	(0)	748711
309	19.7	21.6	3.0	chr11	116379692	116379822	(18706800)	+	MIRb	SINE/MIR	107	268	(0)	749183
203	33.9	4.2	8.5	chr11	116606023	116606222	(18480400)	+	L2c	LINE/L2	3131	3321	(66)	749624
1723	23.3	9.0	6.4	chr11	118703506	118704100	(16382522)	C	MLT1E1A	LTR/ERVL-MaLR	(48)	632	21	753394
329	24.2	4.0	3.1	chr11	119157123	119157220	(15929402)	+	MIRc	SINE/MIR	38	136	(132)	754347
242	35.4	2.0	0.0	chr11	119157223	119157318	(15929304)	C	L2b	LINE/L2	(0)	3375	3278	754348
436	28.7	3.6	0.0	chr11	119157334	119157471	(15929151)	+	MIRb	SINE/MIR	114	265	(3)	754347
562	26.8	4.8	3.8	chr11	119518644	119518854	(15567768)	+	MIRb	SINE/MIR	43	254	(14)	755004
16	17.3	2.6	0.0	chr11	119518922	119518960	(15567662)	+	G-rich	Low_complexity	1	40	(0)	755005
225	21.3	18.3	4.1	chr11	119773432	119773529	(15313093)	C	MIR3	SINE/MIR	(12)	196	82	755446
376	26.9	9.6	0.2	chr11	120653103	120653233	(14433389)	C	L2a	LINE/L2	(0)	3426	3229	756930
431	32.5	7.4	0.5	chr11	120750767	120750955	(14335667)	C	MIRb	SINE/MIR	(15)	253	51	757086
343	29.6	11.2	2.9	chr11	120855041	120855179	(14231443)	C	L2b	LINE/L2	(54)	3321	3170	757266
187	30.5	10.8	4.1	chr11	120855291	120855437	(14231185)	+	L2b	LINE/L2	3199	3356	(19)	757267
909	23.6	5.1	2.0	chr11	121082670	121082916	(14003706)	C	LTR67B	LTR/ERVL	(42)	578	324	757643
1259	29.8	7.4	3.3	chr11	121554459	121555027	(13531595)	+	Tigger15a	DNA/TcMar-Tigger	1	594	(121)	758295
13	13.8	2.9	2.9	chr11	122981927	122981960	(12104662)	+	G-rich	Low_complexity	1	35	(0)	760558
17	11.7	5.4	0.0	chr11	124864008	124864044	(10222578)	+	(CCCCAC)n	Simple_repeat	1	39	(0)	763694
300	29.1	20.9	2.2	chr11	126510596	126510715	(8575907)	C	L3	LINE/CR1	(241)	3858	3718	766201
403	29.1	15.4	2.2	chr11	126546175	126546399	(8540223)	C	MIRc	SINE/MIR	(3)	265	6	766265
274	40.3	1.6	2.5	chr11	128288294	128288489	(6798133)	+	L2a	LINE/L2	2654	2847	(572)	768711
297	30.4	8.3	9.0	chr11	128288515	128288823	(6797799)	+	L2a	LINE/L2	3088	3378	(9)	768711
284	31.7	10.9	2.4	chr11	128365425	128365550	(6721072)	C	MIR3	SINE/MIR	(54)	154	17	768817
219	20.2	11.9	4.6	chr11	131925870	131925978	(3160644)	+	L2a	LINE/L2	3309	3426	(0)	774006
191	27.3	0.0	0.0	chr11	131926008	131926051	(3160571)	C	L2a	LINE/L2	(22)	3404	3361	774007
15	32.5	1.3	2.6	chr12	67071	67146	(133208163)	+	(GCC)n	Simple_repeat	1	77	(0)	778169
549	21.7	21.7	1.5	chr12	121804	122004	(133153305)	C	MIRb	SINE/MIR	(9)	259	7	778253
12	33.2	0.0	1.7	chr12	1932613	1932670	(131342639)	+	(AGTGA)n	Simple_repeat	1	58	(0)	781453
273	34.5	0.7	1.9	chr12	2783990	2784111	(130491198)	+	L2c	LINE/L2	3226	3352	(35)	782637
468	32.2	10.2	4.0	chr12	3332441	3332594	(129942715)	C	MIRc	SINE/MIR	(0)	268	100	783667
15	18.7	2.2	4.3	chr12	3491736	3491781	(129783528)	+	(CCG)n	Simple_repeat	1	47	(0)	783928
67	0.0	0.0	0.0	chr12	3491833	3491889	(129783420)	+	(TG)n	Simple_repeat	1	57	(0)	783929
511	29.9	5.9	3.7	chr12	4937214	4937760	(128337549)	C	L2c	LINE/L2	(78)	3309	2732	786294
2203	11.5	1.0	1.3	chr12	4937823	4938135	(128337174)	+	AluSx	SINE/Alu	1	312	(0)	786295
24	9.5	0.0	0.0	chr12	6792957	6792990	(126482319)	+	(GA)n	Simple_repeat	1	34	(0)	789400
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
2258	11.6	0.3	0.0	chr12	7763092	7763392	(125511917)	C	AluSz	SINE/Alu	(10)	302	1	790959
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
386	33.1	0.7	0.7	chr12	11778135	11778277	(121497032)	+	MIRb	SINE/MIR	117	259	(9)	796995
216	16.3	2.0	0.0	chr12	11872189	11872237	(121403072)	C	MIR3	SINE/MIR	(77)	131	82	797132
2507	20.0	3.3	0.7	chr12	14264417	14264916	(119010393)	C	MLT1F1	LTR/ERVL-MaLR	(58)	533	1	801058
17	15.4	2.8	0.0	chr12	16789452	16789487	(116485822)	+	(AAT)n	Simple_repeat	1	37	(0)	804705
3443	12.0	0.5	22.1	chr12	18782756	18783604	(114491705)	+	MER4A	LTR/ERV1	1	664	(0)	807066
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
2225	11.7	1.4	0.0	chr12	27896264	27896554	(105378755)	+	AluSx1	SINE/Alu	1	295	(17)	820310
1136	29.0	10.6	6.8	chr12	29229973	29230907	(104044402)	C	L2a	LINE/L2	(43)	3383	2415	822097
881	35.1	9.8	2.2	chr12	29230909	29231555	(104043754)	C	L2b	LINE/L2	(382)	3037	2336	822096
2191	12.6	0.0	0.3	chr12	32175317	32175617	(101099692)	C	AluSx	SINE/Alu	(12)	300	1	826985
843	20.3	7.8	4.3	chr12	43544870	43545080	(89730229)	C	MER20	DNA/hAT-Charlie	(0)	219	1	838215
432	27.8	14.9	5.5	chr12	43832701	43832917	(89442392)	+	MIR	SINE/MIR	13	253	(9)	838627
7971	17.2	4.6	0.8	chr12	45164684	45166126	(88109183)	C	L1PREC2	LINE/L1	(6654)	1501	1	840413
17619	11.6	2.4	1.5	chr12	46338713	46339532	(86935777)	C	L1MA3	LINE/L1	(3059)	3087	2254	842119
442	33.6	10.1	2.7	chr12	47534664	47534810	(85740499)	C	L2b	LINE/L2	(4)	3371	3213	843817
1161	30.3	15.9	2.5	chr12	50583980	50584557	(82690752)	+	L2c	LINE/L2	2148	2819	(600)	849564
57	26.7	0.8	5.8	chr12	51590947	51591185	(81684124)	+	(GCGG)n	Simple_repeat	1	241	(0)	851612
16	4.5	4.3	0.0	chr12	52741653	52741675	(80533634)	+	(AC)n	Simple_repeat	1	24	(0)	853356
634	25.3	3.0	2.4	chr12	52741710	52741875	(80533434)	+	MIR	SINE/MIR	3	169	(93)	853357
14	18.2	0.0	0.0	chr12	53452109	53452139	(79823170)	+	(CAG)n	Simple_repeat	1	31	(0)	854795
27	3.0	2.9	0.0	chr12	53452151	53452184	(79823125)	+	(CCCG)n	Simple_repeat	1	35	(0)	854796
23	15.2	0.0	2.2	chr12	53452217	53452262	(79823047)	+	(TCC)n	Simple_repeat	1	46	(0)	854797
314	35.0	4.6	6.7	chr12	58895167	58895779	(74379530)	C	L2b	LINE/L2	(56)	3319	2727	863365
202	38.5	0.0	0.0	chr12	64826607	64826684	(68448625)	C	L3b	LINE/CR1	(68)	5164	5087	871867
587	20.4	6.0	8.9	chr12	65005765	65005962	(68269347)	+	L2a	LINE/L2	3200	3426	(0)	872129
271	26.9	11.5	0.9	chr12	65501983	65502098	(67773211)	+	MIRb	SINE/MIR	71	200	(68)	872876
13	25.3	2.0	2.0	chr12	65999950	65999998	(67275311)	+	(AATGAA)n	Simple_repeat	1	50	(0)	873645
4496	14.2	1.4	8.4	chr12	70028179	70029036	(63246273)	C	LTR1A1	LTR/ERV1	(1)	798	2	880268
1976	30.8	13.1	5.8	chr12	70214488	70215631	(63059678)	C	L1M3e	LINE/L1	(5575)	1455	199	880567
34	0.0	0.0	0.0	chr12	70919674	70919705	(62355604)	+	(T)n	Simple_repeat	1	32	(0)	881605
273	33.3	2.5	2.5	chr12	81350296	81350415	(51924894)	C	L2a	LINE/L2	(14)	3412	3293	896269
652	22.3	0.8	0.0	chr12	82788884	82789004	(50486305)	+	FLAM_C	SINE/Alu	1	122	(21)	898254
40	0.0	0.0	0.0	chr12	89533536	89533578	(43741731)	+	(A)n	Simple_repeat	1	43	(0)	907187
369	32.1	6.0	6.7	chr12	91781051	91781317	(41493992)	+	MLT1J1	LTR/ERVL-MaLR	36	300	(144)	910419
424	32.9	6.0	10.6	chr12	93807505	93807769	(39467540)	C	L2b	LINE/L2	(15)	3360	3109	914156
682	24.4	15.6	2.9	chr12	94175720	94175998	(39099311)	C	L2a	LINE/L2	(5)	3421	3101	914796
187	19.6	1.8	6.7	chr12	97322585	97322644	(35952665)	+	L2a	LINE/L2	3363	3419	(7)	920511
543	22.7	7.2	0.0	chr12	97322652	97322792	(35952517)	C	MER39	LTR/ERV1	(4)	703	552	920512
332	36.5	2.2	3.3	chr12	97447137	97447320	(35827989)	C	MamRep38	DNA/hAT	(108)	187	6	920736
4977	12.4	4.4	0.0	chr12	98897236	98898207	(34377102)	+	L1PB4	LINE/L1	5145	6155	(1)	923087
326	31.7	9.3	2.8	chr12	98901174	98901384	(34373925)	C	L2c	LINE/L2	(960)	2459	2234	923090
12	21.6	0.0	0.0	chr12	100142765	100142796	(33132513)	+	(CCACGG)n	Simple_repeat	1	32	(0)	924965
660	27.3	10.4	1.6	chr12	100461792	100462001	(32813308)	+	MamRep38	DNA/hAT	2	230	(65)	925617
302	24.5	8.6	1.9	chr12	100539355	100539462	(32735847)	C	L2b	LINE/L2	(2)	3373	3258	925779
428	27.3	2.0	0.0	chr12	102806620	102806718	(30468591)	C	MIR3	SINE/MIR	(73)	135	35	929660
358	30.4	0.0	4.7	chr12	102806706	102806812	(30468497)	+	L2b	LINE/L2	3239	3340	(35)	929661
38	6.4	0.0	0.0	chr12	102834151	102834199	(30441110)	+	(ATAA)n	Simple_repeat	1	49	(0)	929703
738	31.7	6.6	5.8	chr12	103011487	103012056	(30263253)	C	L2a	LINE/L2	(0)	3426	2858	929991
1912	19.2	0.0	0.0	chr12	103016690	103016991	(30258318)	C	AluJb	SINE/Alu	(9)	303	2	930000
3542	24.7	2.9	2.6	chr12	103197313	103198947	(30076362)	C	L1PA15	LINE/L1	(4774)	2012	286	930270
296	27.0	7.5	0.0	chr12	103293975	103294048	(29981261)	+	L2b	LINE/L2	3296	3375	(0)	930449
255	21.9	3.0	1.5	chr12	103294117	103294181	(29981128)	+	L2b	LINE/L2	3360	3425	(1)	930449
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
412	25.9	3.6	0.0	chr12	107466906	107467013	(25808296)	+	MER46C	DNA/TcMar-Tigger	220	331	(7)	938212
228	31.6	0.0	3.9	chr12	107467020	107467121	(25808188)	+	MIR	SINE/MIR	153	250	(12)	938213
425	23.1	9.5	9.9	chr12	107870407	107870608	(25404701)	+	L1MA9	LINE/L1	6046	6246	(66)	938989
343	25.6	7.2	0.0	chr12	107870610	107870738	(25404571)	C	MER3	DNA/hAT-Charlie	(40)	169	31	938990
14	25.1	0.0	2.2	chr12	108004733	108004777	(25270532)	+	(ATTC)n	Simple_repeat	1	45	(0)	939233
585	22.3	1.5	5.8	chr12	108194725	108194862	(25080447)	+	L2a	LINE/L2	3295	3426	(0)	939711
1274	30.7	4.3	1.7	chr12	108197810	108198289	(25077020)	+	L2a	LINE/L2	2934	3426	(0)	939716
395	27.6	19.8	2.4	chr12	108198319	108198526	(25076783)	+	L2c	LINE/L2	3055	3307	(80)	939717
316	28.3	3.6	4.8	chr12	108214734	108214900	(25060409)	C	MamRep564	Unknown	(89)	268	104	939756
446	21.4	5.9	1.8	chr12	108382103	108382216	(24893093)	+	MIR3	SINE/MIR	85	203	(5)	940165
537	24.0	15.3	3.2	chr12	108382401	108382589	(24892720)	C	MER20	DNA/hAT-Charlie	(0)	219	4	940166
60	18.4	0.0	0.0	chr12	108468635	108468748	(24806561)	+	G-rich	Low_complexity	1	114	(0)	940361
16	15.3	0.0	2.6	chr12	108515292	108515329	(24759980)	+	(GGAGCCG)n	Simple_repeat	1	38	(0)	940467
234	25.4	4.5	1.6	chr12	108890441	108890504	(24384805)	+	MER5B	DNA/hAT-Charlie	1	66	(112)	941223
320	28.4	8.2	2.1	chr12	108890538	108890731	(24384578)	C	L1M4	LINE/L1	(1880)	4266	4060	941224
282	26.4	0.8	11.7	chr12	109259207	109259291	(24016018)	C	MIRc	SINE/MIR	(60)	208	129	942135
319	29.9	12.8	0.0	chr12	109735282	109735458	(23539851)	+	MIRb	SINE/MIR	66	268	(0)	943195
224	18.2	0.0	10.2	chr12	109736645	109736693	(23538616)	+	L2b	LINE/L2	3309	3352	(23)	943197
16	20.3	0.0	0.0	chr12	110742795	110742829	(22532480)	+	(GGC)n	Simple_repeat	1	35	(0)	945398
1420	11.8	15.6	0.0	chr12	111212407	111212644	(22062665)	C	AluJr	SINE/Alu	(30)	282	1	946524
264	28.9	36.9	7.3	chr12	112198442	112198740	(21076569)	C	L2c	LINE/L2	(564)	2855	2423	948668
1510	27.5	6.7	6.6	chr12	112198741	112199363	(21075946)	C	LTR87	LTR/ERVL?	(0)	624	1	948669
975	32.1	7.3	3.9	chr12	112664717	112665228	(20610081)	+	LTR16E1	LTR/ERVL	5	535	(3)	949808
327	27.4	0.0	0.0	chr12	112812855	112812927	(20462382)	+	MIRb	SINE/MIR	193	265	(3)	950164
231	25.9	1.7	0.0	chr12	112937779	112937836	(20337473)	C	L1M5	LINE/L1	(1538)	4608	4550	950442
648	23.0	4.6	1.2	chr12	112937838	112938004	(20337305)	+	MIR	SINE/MIR	20	192	(70)	950443
326	21.8	7.5	0.0	chr12	113063878	113063964	(20211345)	C	MIR3	SINE/MIR	(72)	136	43	950704
217	33.4	11.3	0.8	chr12	113065218	113065362	(20209947)	C	MIR1_Amn	SINE/MIR	(24)	206	49	950707
504	29.3	3.6	0.0	chr12	113066672	113066804	(20208505)	C	L2a	LINE/L2	(0)	3426	3289	950710
27	15.2	0.0	0.0	chr12	113358637	113358687	(19916622)	+	(CTGGCG)n	Simple_repeat	1	51	(0)	951394
17	28.0	1.5	1.5	chr12	113428153	113428218	(19847091)	+	GA-rich	Low_complexity	1	67	(0)	951578
371	25.7	6.8	3.2	chr12	114248621	114248777	(19026532)	+	L2a	LINE/L2	3259	3421	(5)	953306
21	10.7	0.0	0.0	chr12	116858118	116858147	(16417162)	+	(A)n	Simple_repeat	1	30	(0)	959125
16	33.1	1.4	1.3	chr12	117190381	117190454	(16084855)	+	(CCG)n	Simple_repeat	1	75	(0)	959740
15	20.1	2.9	0.0	chr12	117190477	117190510	(16084799)	+	(CG)n	Simple_repeat	1	35	(0)	959741
209	31.2	4.9	3.8	chr12	117563147	117563226	(15712083)	C	MER5A	DNA/hAT-Charlie	(18)	171	91	960614
825	17.9	2.5	3.7	chr12	118109301	118109462	(15165847)	C	AluJo	SINE/Alu	(36)	276	117	961865
318	31.4	5.5	0.0	chr12	118633232	118633352	(14641957)	C	L2a	LINE/L2	(9)	3417	3290	963017
16	13.2	0.0	0.0	chr12	118645303	118645327	(14629982)	+	(T)n	Simple_repeat	1	25	(0)	963047
77	29.2	1.7	0.0	chr12	118757505	118757565	(14517744)	+	GA-rich	Low_complexity	182	242	(0)	963291
151	8.6	0.5	0.5	chr12	118757667	118757879	(14517430)	+	(CT)n	Simple_repeat	1	214	(0)	963292
374	32.5	8.7	5.9	chr12	118922296	118922517	(14352792)	C	L2b	LINE/L2	(8)	3379	3151	963616
15	22.7	0.0	0.0	chr12	119061050	119061081	(14214228)	+	(TG)n	Simple_repeat	1	32	(0)	963909
538	28.1	6.6	3.8	chr12	119208442	119208648	(14066661)	C	MIRb	SINE/MIR	(21)	247	26	964246
270	25.6	8.7	2.1	chr12	119208727	119208866	(14066443)	C	MER126	DNA	(105)	344	195	964247
345	25.0	4.4	4.4	chr12	119528234	119528346	(13746963)	C	MIRb	SINE/MIR	(23)	245	133	964993
17	20.4	2.1	2.1	chr12	119989948	119989994	(13285315)	+	(CCG)n	Simple_repeat	1	48	(0)	966005
12	25.7	0.0	0.0	chr12	119990018	119990054	(13285255)	+	(GGAGCT)n	Simple_repeat	1	37	(0)	966006
25	18.9	4.3	5.2	chr12	120469569	120469661	(12805648)	+	(CCG)n	Simple_repeat	1	97	(0)	967152
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
18	18.8	6.5	1.5	chr12	122500541	122500611	(10774698)	+	(CGCCCT)n	Simple_repeat	1	74	(0)	972003
14	12.5	0.0	0.0	chr12	122500719	122500744	(10774565)	+	(TCG)n	Simple_repeat	1	26	(0)	972004
560	31.8	6.3	0.0	chr12	122956189	122956367	(10318942)	C	MIR	SINE/MIR	(15)	247	57	973039
2917	15.0	1.3	6.8	chr12	123113380	123113419	(10161890)	C	L1MB7	LINE/L1	(19)	6165	6136	973327
1701	18.6	0.7	0.7	chr12	123113420	123113693	(10161616)	+	AluJb	SINE/Alu	2	275	(37)	973328
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
13	12.7	0.0	0.0	chr12	123584949	123584974	(9690335)	+	(CCGCC)n	Simple_repeat	1	26	(0)	974480
18	15.4	0.0	0.0	chr12	124494217	124494252	(8781057)	+	(ACACAC)n	Simple_repeat	1	36	(0)	976157
568	27.6	4.1	2.0	chr12	124928036	124928262	(8347047)	+	L2a	LINE/L2	3126	3424	(2)	977167
18	19.4	0.0	0.0	chr12	124928264	124928304	(8347005)	+	(TGAA)n	Simple_repeat	1	41	(0)	977168
1304	24.3	5.8	6.4	chr12	125195166	125195394	(8079915)	C	L2a	LINE/L2	(17)	3409	3185	977750
237	26.4	5.4	2.2	chr12	125263476	125263564	(8011745)	+	L2a	LINE/L2	3324	3415	(11)	977906
252	28.2	4.9	0.0	chr12	125263562	125263639	(8011670)	+	L2b	LINE/L2	3293	3374	(1)	977907
408	30.4	2.1	2.8	chr12	125381393	125381534	(7893775)	C	LTR16E1	LTR/ERVL	(173)	365	225	978136
246	29.3	3.5	0.0	chr12	125381589	125381670	(7893639)	C	LTR16E1	LTR/ERVL	(452)	86	2	978136
24	34.3	0.0	0.0	chr12	125381671	125381755	(7893554)	+	(TGTG)n	Simple_repeat	1	85	(0)	978137
304	36.3	0.7	1.5	chr12	126681829	126681965	(6593344)	C	L2b	LINE/L2	(24)	3351	3216	980207
39	21.6	3.4	5.2	chr12	128823828	128823975	(4451334)	+	(GCC)n	Simple_repeat	1	153	(0)	983925
274	35.2	10.7	5.5	chr12	129119681	129120077	(4155232)	C	L2b	LINE/L2	(1)	3374	2955	984504
758	34.5	7.0	3.5	chr12	129311439	129312369	(3962940)	C	L2a	LINE/L2	(5)	3421	2451	984832
16	6.1	8.8	0.0	chr12	130462039	130462072	(2813237)	+	(TGGCTGC)n	Simple_repeat	1	37	(0)	986691
13	16.7	4.8	2.3	chr12	130526882	130526923	(2748386)	+	G-rich	Low_complexity	1	44	(0)	986790
245	28.7	10.3	1.1	chr12	130527098	130527185	(2748124)	+	MIRc	SINE/MIR	18	114	(154)	986791
2604	6.5	0.0	0.3	chr12	130552872	130553180	(2722129)	+	AluY	SINE/Alu	2	309	(2)	986834
255	25.0	10.0	8.5	chr12	131390447	131390564	(1884745)	+	L2c	LINE/L2	3247	3366	(21)	988059
6427	21.1	10.5	0.9	chr12	131586527	131587990	(1687319)	+	MER52A	LTR/ERV1	18	1755	(0)	988308
278	26.1	19.0	0.0	chr12	131618395	131618509	(1656800)	+	L2b	LINE/L2	3234	3375	(0)	988346
320	27.8	3.6	3.6	chr12	131618560	131618697	(1656612)	C	MER5A	DNA/hAT-Charlie	(3)	186	49	988347
258	30.6	5.4	3.7	chr12	132447146	132447308	(828001)	C	MLT1C	LTR/ERVL-MaLR	(302)	289	124	989470
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
601	35.5	14.1	1.2	chr13	22147960	22148543	(92215785)	C	L3b	LINE/CR1	(5)	4094	3423	997120
20	16.3	3.3	4.8	chr13	25171211	25171270	(89193058)	+	(GCC)n	Simple_repeat	1	62	(0)	1001408
220	24.3	5.0	1.9	chr13	26529470	26529576	(87834752)	+	MIR	SINE/MIR	83	202	(6)	1003415
562	31.4	6.6	6.1	chr13	26867202	26867591	(87496737)	+	L2c	LINE/L2	2954	3357	(30)	1003923
1244	24.4	3.4	1.8	chr13	27269029	27269391	(87094937)	+	MLT1H	LTR/ERVL-MaLR	13	405	(190)	1004624
1234	15.4	0.5	2.8	chr13	28056700	28056913	(86307415)	C	MER3	DNA/hAT-Charlie	(0)	209	1	1006003
339	31.4	0.0	8.5	chr13	28851459	28851587	(85512741)	C	L2c	LINE/L2	(8)	3379	3262	1007418
271	28.2	3.1	8.2	chr13	28851631	28851765	(85512563)	C	Arthur1A	DNA/hAT-Tip100	(22)	155	28	1007419
313	27.4	10.1	0.8	chr13	30154389	30154513	(84209815)	+	MIRb	SINE/MIR	1	138	(130)	1009211
362	29.4	6.4	2.2	chr13	30154492	30154759	(84209569)	+	L2	LINE/L2	2509	2788	(631)	1009212
1330	28.6	7.9	5.1	chr13	30727421	30727951	(83636377)	+	MLT2F	LTR/ERVL	3	549	(114)	1010264
1745	23.0	7.9	0.9	chr13	30727952	30728385	(83635943)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1010267
23	6.3	0.0	0.0	chr13	36057143	36057175	(78307153)	+	(TGA)n	Simple_repeat	1	33	(0)	1018001
273	30.3	5.4	10.3	chr13	39474662	39474933	(74889395)	C	L2b	LINE/L2	(13)	3362	3105	1022670
96	0.0	0.0	0.0	chr13	42049053	42049137	(72315191)	+	(GGGAAGGCG)n	Simple_repeat	1	85	(0)	1026763
31	19.2	0.0	4.8	chr13	42049152	42049235	(72315093)	+	(GGCGG)n	Simple_repeat	1	84	(0)	1026764
11	27.6	0.0	0.0	chr13	43786271	43786309	(70578019)	+	G-rich	Low_complexity	1	39	(0)	1029332
13502	14.0	2.9	6.2	chr13	44169133	44170672	(70193656)	C	L1M1	LINE/L1	(3211)	4351	3027	1029877
253	36.9	0.9	0.0	chr13	46168637	46168747	(68195581)	C	Plat_L3	LINE/CR1	(45)	3541	3430	1033448
180	29.8	0.0	0.0	chr13	51136605	51136651	(63227677)	+	MER5A	DNA/hAT-Charlie	141	187	(2)	1041133
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
1441	9.3	0.4	13.6	chr13	52968370	52968563	(61395765)	+	L1PB2	LINE/L1	5913	6087	(64)	1043977
460	24.8	0.0	0.0	chr13	53254754	53254858	(61109470)	C	L1MA10	LINE/L1	(0)	6334	6230	1044384
1430	30.4	5.4	2.0	chr13	57265043	57265840	(57098488)	C	L1ME1	LINE/L1	(13)	6165	5337	1049336
24	6.8	0.0	0.0	chr13	59438214	59438244	(54926084)	+	(A)n	Simple_repeat	1	31	(0)	1052105
6689	17.5	9.5	1.6	chr13	64924437	64926085	(49438243)	C	MER52D	LTR/ERV1	(0)	2123	1	1059142
185	21.9	13.7	5.8	chr13	75512643	75512729	(38851599)	C	MIR	SINE/MIR	(44)	218	124	1073467
2423	10.3	0.0	0.0	chr13	76954847	76955156	(37409172)	+	AluSg	SINE/Alu	1	310	(0)	1075499
239	29.5	4.7	10.3	chr13	78830490	78830625	(35533703)	+	MER5A	DNA/hAT-Charlie	55	182	(7)	1078091
684	31.3	7.3	0.0	chr13	86193268	86193497	(28170831)	C	MER115	DNA/hAT-Tip100	(0)	693	446	1087460
2002	21.4	2.5	2.0	chr13	91058014	91058453	(23305875)	C	MER57A-int	LTR/ERV1	(4079)	2108	1667	1093712
20	23.2	5.2	1.2	chr13	91398518	91398594	(22965734)	+	G-rich	Low_complexity	1	81	(0)	1094194
5521	11.4	1.5	0.9	chr13	94953078	94954759	(19409569)	+	L1PA16	LINE/L1	4469	6157	(9)	1099166
295	33.6	11.3	1.9	chr13	97753032	97753528	(16610800)	+	L2b	LINE/L2	1905	2462	(957)	1103445
19	0.0	3.3	3.2	chr13	97753529	97753558	(16610770)	+	(AATA)n	Simple_repeat	1	31	(0)	1103447
18	11.9	0.0	5.0	chr13	99312104	99312143	(15052185)	+	(TTTGT)n	Simple_repeat	1	40	(0)	1106069
1691	15.7	14.2	0.0	chr13	99403880	99404243	(14960085)	C	MSTB	LTR/ERVL-MaLR	(0)	426	3	1106187
32	22.2	1.8	4.5	chr13	99606510	99606661	(14757667)	+	G-rich	Low_complexity	1	147	(0)	1106537
14	21.8	6.8	3.8	chr13	99606673	99606758	(14757570)	+	(GGC)n	Simple_repeat	1	88	(0)	1106538
878	21.9	0.5	3.5	chr13	99796439	99796637	(14567691)	C	MIR	SINE/MIR	(10)	252	60	1106852
3698	2.9	0.2	0.2	chr13	101988424	101988866	(12375462)	+	L1PA4	LINE/L1	5710	6152	(3)	1110138
894	27.7	7.8	4.3	chr13	102405583	102405978	(11958350)	+	MLT1J	LTR/ERVL-MaLR	45	455	(57)	1110737
1561	20.2	5.2	2.0	chr13	102405981	102406333	(11957995)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1110738
375	33.9	7.4	6.0	chr13	104683789	104684055	(9680273)	+	L2a	LINE/L2	3156	3426	(0)	1113775
260	25.4	0.0	3.1	chr13	104684053	104684117	(9680211)	C	MIR	SINE/MIR	(187)	75	13	1113774
344	34.3	9.6	9.8	chr13	104837461	104838082	(9526246)	+	L2c	LINE/L2	2721	3374	(1)	1113956
487	29.1	3.8	4.2	chr13	107518508	107518719	(6845609)	C	L2a	LINE/L2	(1)	3425	3215	1117543
382	30.8	3.6	3.1	chr13	108877334	108877524	(5486804)	+	MIRb	SINE/MIR	47	238	(30)	1119364
20	12.3	2.0	5.9	chr13	111206370	111206419	(3157909)	+	(TGC)n	Simple_repeat	1	51	(0)	1122295
20428	13.0	5.1	5.9	chr13	111257502	111262337	(3101991)	+	L1M1	LINE/L1	5	4810	(2755)	1122353
348	29.9	8.9	3.0	chr14	21095381	21095549	(85948169)	+	MIR3	SINE/MIR	23	202	(6)	1129077
34	9.8	1.8	0.0	chr14	26444825	26444879	(80598839)	+	(AAAC)n	Simple_repeat	1	56	(0)	1136811
15789	21.7	0.8	0.9	chr14	30527560	30530363	(76513355)	C	HERVL18-int	LTR/ERVL	(106)	5941	3141	1141939
18	16.3	0.0	0.0	chr14	30622341	30622376	(76421342)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	1142089
7219	11.9	1.9	3.0	chr14	34397865	34398753	(72644965)	+	L1MA3	LINE/L1	3677	4551	(3014)	1147713
4080	11.3	2.8	1.3	chr14	49589571	49590177	(57453541)	+	L1PA15	LINE/L1	5529	6144	(21)	1168214
33	19.3	2.3	2.3	chr14	50668015	50668100	(56375618)	+	(CCG)n	Simple_repeat	1	88	(0)	1170319
16	29.8	1.6	0.0	chr14	51095108	51095183	(55948535)	+	(CCGCC)n	Simple_repeat	1	77	(0)	1170951
383	32.1	12.1	5.8	chr14	51780798	51781005	(55262713)	C	MIRb	SINE/MIR	(16)	252	30	1171966
226	31.9	9.9	5.8	chr14	53150156	53150328	(53893390)	+	L2b	LINE/L2	3001	3181	(194)	1174110
750	30.8	12.1	2.6	chr14	54550008	54550561	(52493157)	C	L2a	LINE/L2	(0)	3426	2802	1176113
897	18.5	1.3	0.7	chr14	55850083	55850233	(51193485)	C	FAM	SINE/Alu	(10)	175	24	1178420
13	27.9	0.0	0.0	chr14	58298863	58298905	(48744813)	+	(CAGCCG)n	Simple_repeat	1	43	(0)	1182004
303	18.6	1.7	0.0	chr14	58796970	58797028	(48246690)	+	MER5A1	DNA/hAT-Charlie	107	166	(0)	1182819
12	12.7	11.1	2.0	chr14	60509149	60509193	(46534525)	+	(AGCCG)n	Simple_repeat	1	50	(0)	1185111
17	31.6	2.7	0.0	chr14	63045482	63045555	(43998163)	+	(CTG)n	Simple_repeat	1	76	(0)	1188630
2775	27.8	4.0	7.1	chr14	63163468	63164585	(43879133)	+	L1MA7	LINE/L1	1235	2316	(5180)	1188821
234	28.5	16.9	5.5	chr14	63412874	63413092	(43630626)	+	L3	LINE/CR1	3738	3986	(113)	1189166
194	22.4	0.0	4.9	chr14	64235678	64235738	(42807980)	+	MIR3	SINE/MIR	10	67	(141)	1190871
195	34.6	1.8	8.6	chr14	66541807	66541923	(40501795)	+	MIRb	SINE/MIR	6	114	(154)	1194752
767	23.5	12.9	2.5	chr14	67186347	67186630	(39857088)	C	LTR50	LTR/ERVL	(7)	788	471	1195583
489	23.2	13.5	4.5	chr14	67186671	67186880	(39856838)	C	LTR50	LTR/ERVL	(287)	244	19	1195583
390	20.6	0.0	0.0	chr14	69567737	69567809	(37475909)	+	L2a	LINE/L2	3353	3425	(1)	1199779
1190	28.5	6.0	3.0	chr14	70036555	70036991	(37006727)	+	ERVL-E-int	LTR/ERVL	3288	3738	(1929)	1200577
2135	25.1	9.8	0.5	chr14	70803783	70804340	(36239378)	+	LTR67B	LTR/ERVL	3	617	(3)	1201770
16	27.8	0.0	0.0	chr14	73950046	73950091	(33093627)	+	(CAGCGA)n	Simple_repeat	1	46	(0)	1207453
403	29.8	12.4	2.8	chr14	74424775	74424985	(32618733)	C	MIRc	SINE/MIR	(17)	251	18	1208507
30	19.6	6.3	4.4	chr14	74426050	74426176	(32617542)	+	(GCC)n	Simple_repeat	1	135	(0)	1208508
313	31.2	6.7	1.6	chr14	74766074	74766200	(32277518)	+	L2a	LINE/L2	3288	3421	(5)	1209142
242	29.9	1.6	9.9	chr14	75174114	75174254	(31869464)	C	L2c	LINE/L2	(19)	3368	3240	1209870
600	30.9	8.7	0.9	chr14	75496921	75497237	(31546481)	+	MLT1O	LTR/ERVL-MaLR	23	366	(176)	1210574
15	16.4	2.9	0.0	chr14	75660791	75660824	(31382894)	+	(CAG)n	Simple_repeat	1	35	(0)	1210879
1031	29.0	10.2	4.4	chr14	76135508	76136005	(30907713)	C	LTR16E1	LTR/ERVL	(1)	537	8	1211671
303	28.1	1.2	0.0	chr14	77208698	77208779	(29834939)	+	MIR	SINE/MIR	180	262	(0)	1213826
2577	4.0	0.3	0.3	chr14	77321602	77321898	(29721820)	+	AluY	SINE/Alu	1	297	(14)	1213988
4889	25.0	8.5	7.0	chr14	78398237	78399392	(28644326)	C	L1MD1	LINE/L1	(5448)	1185	18	1216157
415	31.2	7.2	3.5	chr14	78447083	78447281	(28596437)	+	MIRc	SINE/MIR	14	220	(48)	1216244
16	7.5	3.6	0.0	chr14	78530111	78530138	(28513580)	+	(AGAA)n	Simple_repeat	1	29	(0)	1216401
1422	26.0	6.4	5.5	chr14	78744875	78745583	(28298135)	C	MamRep605	LTR?	(88)	761	46	1216731
195	32.0	3.8	3.8	chr14	81433376	81433534	(25610184)	+	L2	LINE/L2	2814	2972	(447)	1220618
874	29.2	2.1	3.9	chr14	81433594	81433878	(25609840)	+	MLT1I	LTR/ERVL-MaLR	100	379	(32)	1220619
232	30.1	7.6	2.7	chr14	82075653	82075727	(24967991)	C	MER91A	DNA/hAT-Tip100	(0)	196	118	1221608
17	18.8	0.0	0.0	chr14	82084919	82084949	(24958769)	+	A-rich	Low_complexity	1	31	(0)	1221629
42	0.0	0.0	0.0	chr14	88197860	88197895	(18845823)	+	(GA)n	Simple_repeat	1	36	(0)	1230051
32	16.5	2.7	1.3	chr14	88197896	88197914	(18845804)	+	GA-rich	Low_complexity	54	74	(0)	1230052
351	22.9	1.9	6.2	chr14	88977785	88977896	(18065822)	+	MamRep564	Unknown	143	249	(108)	1231306
366	32.0	12.0	1.7	chr14	88978045	88978216	(18065502)	+	MER91A	DNA/hAT-Tip100	5	196	(0)	1231307
763	26.7	5.3	0.5	chr14	89324977	89325172	(17718546)	C	MER3	DNA/hAT-Charlie	(2)	207	2	1231866
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
378	34.4	12.8	4.5	chr14	90495027	90495361	(16548357)	C	L2c	LINE/L2	(0)	3387	3021	1234032
17	31.2	0.0	2.3	chr14	93431145	93431215	(13612503)	+	G-rich	Low_complexity	1	69	(0)	1239456
234	26.5	8.3	8.3	chr14	94293570	94293713	(12750005)	C	L2b	LINE/L2	(21)	3354	3211	1240902
354	31.3	2.6	3.8	chr14	94654101	94654326	(12389392)	+	MIRb	SINE/MIR	2	234	(34)	1241500
421	31.2	1.7	1.1	chr14	94654481	94654655	(12389063)	C	MER5B	DNA/hAT-Charlie	(0)	178	3	1241501
314	29.7	3.8	1.5	chr14	95784111	95784240	(11259478)	+	MIRb	SINE/MIR	87	219	(49)	1243711
330	31.0	8.9	5.4	chr14	95862503	95862686	(11181032)	+	MIR3	SINE/MIR	17	207	(1)	1243855
634	33.2	6.7	1.2	chr14	95935101	95935341	(11108377)	+	MIRb	SINE/MIR	8	262	(6)	1243966
14739	16.9	4.0	8.8	chr14	96645782	96650343	(10393375)	C	L1MA4A	LINE/L1	(2469)	5093	727	1245252
213	34.1	15.0	3.6	chr14	97517896	97518230	(9525488)	C	L2c	LINE/L2	(42)	3333	2950	1246858
334	28.6	11.5	1.5	chr14	97580920	97581114	(9462604)	C	MER102b	DNA/hAT-Charlie	(124)	217	1	1246967
709	24.4	2.7	1.1	chr14	100663242	100663423	(6380295)	C	MIR	SINE/MIR	(4)	258	74	1252228
876	24.9	14.5	0.7	chr14	100663498	100663776	(6379942)	C	MER33	DNA/hAT-Charlie	(0)	324	1	1252229
14	18.8	3.2	4.2	chr14	103334689	103334755	(3708963)	+	G-rich	Low_complexity	1	66	(0)	1256589
224	28.0	3.6	1.8	chr14	103530440	103530548	(3513170)	C	L2	LINE/L2	(646)	2773	2663	1256997
557	28.6	3.6	7.9	chr14	104550138	104550429	(2493289)	+	MLT1L	LTR/ERVL-MaLR	226	602	(8)	1258544
15	7.0	6.7	0.0	chr14	105474211	105474240	(1569478)	+	(GGGGCG)n	Simple_repeat	1	32	(0)	1259729
5054	17.3	4.4	3.3	chr14	105800795	105801280	(1242438)	+	L1MC2	LINE/L1	5834	6334	(10)	1260022
301	27.6	13.3	1.1	chr15	22699834	22700038	(79291151)	+	L1ME3	LINE/L1	5910	6142	(31)	1266148
1748	21.9	3.2	3.6	chr15	22700043	22700511	(79290678)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1266149
986	25.7	0.3	1.0	chr15	23437472	23437781	(78553408)	+	Charlie5	DNA/hAT-Charlie	2222	2529	(95)	1267447
487	16.9	0.0	1.2	chr15	23437782	23437864	(78553325)	C	AluJb	SINE/Alu	(18)	294	213	1267448
492	23.8	3.8	0.0	chr15	23437931	23438081	(78553108)	+	MIR3	SINE/MIR	16	174	(34)	1267449
380	29.2	9.3	0.5	chr15	26453802	26453997	(75537192)	C	L2a	LINE/L2	(1331)	2088	1874	1271492
13	29.4	0.0	0.0	chr15	26454047	26454092	(75537097)	+	(ACCAGC)n	Simple_repeat	1	46	(0)	1271493
4013	12.8	7.9	0.3	chr15	26454216	26454868	(75536321)	+	LTR62	LTR/ERVL	1	707	(2)	1271494
17	4.9	0.0	0.0	chr15	29243135	29243155	(72748034)	+	(AC)n	Simple_repeat	1	21	(0)	1275156
680	28.7	5.7	1.9	chr15	29245636	29245955	(72745234)	+	L1ME4b	LINE/L1	37	369	(523)	1275160
235	22.5	5.3	5.3	chr15	29246008	29246082	(72745107)	+	L2a	LINE/L2	3344	3418	(8)	1275161
339	26.9	4.8	9.2	chr15	29246083	29246112	(72745077)	+	L1MC4a	LINE/L1	5675	5699	(2183)	1275158
2169	13.0	1.3	1.3	chr15	29246113	29246412	(72744777)	+	AluJb	SINE/Alu	4	303	(9)	1275162
7284	17.5	5.6	4.5	chr15	29651428	29652990	(72338199)	+	MER52D	LTR/ERV1	541	2121	(2)	1275813
973	26.2	2.0	10.3	chr15	30885640	30885958	(71105231)	+	MLT-int	LTR/ERVL-MaLR	499	790	(945)	1277800
1012	19.5	10.0	1.8	chr15	30886082	30886343	(71104846)	+	MLT-int	LTR/ERVL-MaLR	1222	1537	(198)	1277800
20	22.1	6.2	5.8	chr15	31080604	31080732	(70910457)	+	(CCCCAGC)n	Simple_repeat	1	137	(0)	1278059
12	14.1	3.0	2.9	chr15	31267027	31267059	(70724130)	+	(AGGCAG)n	Simple_repeat	1	34	(0)	1278386
114	24.5	0.9	3.1	chr15	36521432	36521746	(65469443)	+	GA-rich	Low_complexity	1	318	(0)	1285766
15461	14.8	3.2	1.7	chr15	38003253	38004953	(63986236)	C	L1M1	LINE/L1	(5799)	1766	24	1287575
1877	11.7	10.3	1.7	chr15	39626487	39626833	(62364356)	+	THE1D	LTR/ERVL-MaLR	2	381	(0)	1289933
49	0.0	0.0	0.0	chr15	40107534	40107575	(61883614)	+	(GT)n	Simple_repeat	1	42	(0)	1290687
41	4.5	0.0	0.0	chr15	40358234	40358279	(61632910)	+	(CCG)n	Simple_repeat	1	46	(0)	1291052
16	8.7	0.0	0.0	chr15	40358333	40358357	(61632832)	+	(CAG)n	Simple_repeat	1	25	(0)	1291053
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
530	22.4	15.3	1.4	chr15	43133302	43133514	(58857675)	C	MIRc	SINE/MIR	(17)	251	4	1296446
12	23.5	0.0	0.0	chr15	44675544	44675575	(57315614)	+	(TCTAGG)n	Simple_repeat	1	32	(0)	1299372
25	18.5	0.0	0.0	chr15	44675574	44675623	(57315566)	+	(TCC)n	Simple_repeat	1	50	(0)	1299373
250	28.9	9.5	0.0	chr15	48001414	48001489	(53989700)	+	MIR	SINE/MIR	178	261	(1)	1304206
305	15.5	0.0	3.3	chr15	48001611	48001670	(53989519)	C	LTR16A2	LTR/ERVL	(164)	331	274	1304207
13	20.2	4.3	2.0	chr15	50765626	50765672	(51225517)	+	(CCGGA)n	Simple_repeat	1	49	(0)	1308472
1039	29.6	6.1	8.0	chr15	52465738	52466403	(49524786)	+	L1M2	LINE/L1	1	631	(6222)	1311331
599	27.8	4.5	4.2	chr15	53311017	53311458	(48679731)	C	L1ME4b	LINE/L1	(93)	799	427	1312617
2528	16.1	3.8	0.6	chr15	56362028	56362509	(45628680)	C	L1MC	LINE/L1	(3368)	2778	2281	1317021
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
15	22.4	1.6	6.2	chr15	59444620	59444683	(42546506)	+	(CTCCT)n	Simple_repeat	1	65	(0)	1322085
243	23.5	9.2	7.0	chr15	61584427	61584554	(40406635)	C	Tigger12	DNA/TcMar-Tigger	(2150)	325	195	1325564
196	28.3	7.7	1.6	chr15	61584588	61584648	(40406541)	C	L2a	LINE/L2	(8)	3418	3354	1325568
267	30.5	0.9	2.8	chr15	61584662	61584769	(40406420)	C	Tigger12	DNA/TcMar-Tigger	(2344)	131	26	1325564
14	16.8	4.7	2.2	chr15	63870827	63870869	(38120320)	+	(CTCAGAG)n	Simple_repeat	1	45	(0)	1329297
348	25.9	13.5	2.5	chr15	63870875	63871033	(38120156)	C	MIRc	SINE/MIR	(25)	183	6	1329298
215	35.6	4.6	1.9	chr15	65400974	65401079	(36590110)	C	MIRc	SINE/MIR	(31)	237	129	1332534
223	20.0	9.1	0.0	chr15	65952713	65952772	(36038417)	C	MIRc	SINE/MIR	(92)	170	105	1333685
448	30.6	4.5	0.0	chr15	66004645	66004791	(35986398)	+	L3	LINE/CR1	3927	4080	(19)	1333801
914	14.6	0.0	6.5	chr15	66004927	66005111	(35986078)	+	AluJo	SINE/Alu	124	296	(16)	1333802
277	27.7	8.6	5.7	chr15	67314759	67314915	(34676274)	C	MER102b	DNA/hAT-Charlie	(179)	162	1	1336411
17	30.2	0.0	0.0	chr15	67825349	67825402	(34165787)	+	(CCT)n	Simple_repeat	1	54	(0)	1337185
19	19.5	3.1	8.1	chr15	68818107	68818202	(33172987)	+	(CCGCGCC)n	Simple_repeat	1	99	(0)	1339116
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
682	31.4	0.8	8.3	chr15	69972980	69973243	(32017946)	+	MIR	SINE/MIR	4	247	(15)	1341243
580	26.8	11.7	10.2	chr15	69976689	69977082	(32014107)	C	MLT1H2	LTR/ERVL-MaLR	(18)	471	71	1341247
403	30.6	8.4	3.2	chr15	70425946	70426151	(31565038)	C	MIRc	SINE/MIR	(16)	252	28	1342124
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
49	0.0	0.0	0.0	chr15	73043844	73043885	(28947304)	+	(TG)n	Simple_repeat	1	42	(0)	1346511
515	21.7	17.7	0.1	chr15	73390996	73391189	(28600000)	+	MIRb	SINE/MIR	25	261	(1)	1347047
287	26.3	15.6	0.9	chr15	73391206	73391320	(28599869)	C	L3	LINE/CR1	(69)	4030	3896	1347048
894	28.4	14.1	4.0	chr15	73391324	73391851	(28599338)	C	MLT1K	LTR/ERVL-MaLR	(4)	591	2	1347049
18	24.4	1.3	6.3	chr15	73842004	73842081	(28149108)	+	(TTTCC)n	Simple_repeat	1	79	(0)	1347816
8392	10.5	4.1	1.5	chr15	74146333	74147193	(27843996)	+	HSMAR2	DNA/TcMar-Mariner	406	1295	(7)	1348332
16	26.4	5.6	0.0	chr15	74826536	74826607	(27164582)	+	G-rich	Low_complexity	1	76	(0)	1349591
15	23.0	0.0	0.0	chr15	74826648	74826688	(27164501)	+	(GTGCCCG)n	Simple_repeat	1	41	(0)	1349592
699	12.7	2.9	0.0	chr15	74988281	74988414	(27002775)	C	L1M4	LINE/L1	(772)	5374	5237	1349962
248	17.6	3.8	0.0	chr15	74995227	74995277	(26995912)	C	MIRc	SINE/MIR	(97)	171	119	1349978
16	23.9	0.0	0.0	chr15	75201839	75201873	(26789316)	+	(C)n	Simple_repeat	1	35	(0)	1350396
20	13.2	0.0	4.4	chr15	75201874	75201881	(26789308)	+	(CGCCC)n	Simple_repeat	3	45	(0)	1350397
344	33.2	1.7	0.9	chr15	77702489	77702622	(24288567)	C	MIRb	SINE/MIR	(18)	250	116	1354500
272	35.2	3.3	0.0	chr15	77709207	77709294	(24281895)	+	L3	LINE/CR1	3903	3993	(106)	1354515
385	32.5	8.1	2.4	chr15	77709312	77709519	(24281670)	C	MIRc	SINE/MIR	(27)	241	21	1354516
271	36.5	2.7	1.4	chr15	77753267	77753413	(24237776)	+	MIR3	SINE/MIR	35	183	(25)	1354599
318	26.0	23.1	1.1	chr15	77795506	77795680	(24195509)	C	L3	LINE/CR1	(764)	3335	3111	1354681
249	27.3	12.3	0.8	chr15	78004174	78004295	(23986894)	C	L2b	LINE/L2	(21)	3354	3217	1355016
431	17.5	2.8	8.0	chr15	79099876	79099987	(22891202)	+	LTR33	LTR/ERVL	1	106	(409)	1357244
698	28.6	6.8	0.8	chr15	79117991	79118237	(22872952)	+	MIRb	SINE/MIR	4	266	(2)	1357278
199	37.3	4.1	0.0	chr15	79176564	79176681	(22814508)	C	L3	LINE/CR1	(346)	3753	3631	1357388
538	33.7	4.0	0.0	chr15	79208452	79208641	(22782548)	C	MIRb	SINE/MIR	(45)	223	26	1357456
1902	16.7	0.3	1.6	chr15	80264326	80264631	(21726558)	C	AluSx	SINE/Alu	(9)	303	2	1359273
285	24.9	6.8	7.3	chr15	82047615	82047816	(19943373)	+	MIR	SINE/MIR	12	220	(42)	1362239
17	17.6	1.7	6.7	chr15	82709459	82709517	(19281672)	+	G-rich	Low_complexity	1	60	(0)	1363302
12256	16.2	2.5	2.2	chr15	86328460	86330951	(15660238)	+	L1PA15-16	LINE/L1	2	2167	(4686)	1369266
28	20.8	0.0	0.0	chr15	86925667	86925719	(15065470)	+	(T)n	Simple_repeat	1	53	(0)	1370117
2306	9.9	0.0	0.0	chr15	86925721	86926013	(15065176)	C	AluY	SINE/Alu	(2)	309	17	1370118
329	27.8	13.0	0.0	chr15	88657984	88658170	(13333019)	+	MIRb	SINE/MIR	7	221	(47)	1372774
249	23.2	4.7	5.8	chr15	89088986	89089072	(12902117)	+	L3	LINE/CR1	3819	3904	(195)	1373631
276	27.8	9.0	6.4	chr15	89089122	89089294	(12901895)	+	L3	LINE/CR1	3902	4079	(20)	1373631
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
22	6.7	3.1	0.0	chr15	89360809	89360840	(12630349)	+	(CA)n	Simple_repeat	1	33	(0)	1374097
523	31.5	7.4	3.5	chr15	89419701	89419960	(12571229)	+	L2	LINE/L2	2686	2956	(463)	1374169
224	28.5	19.3	2.8	chr15	89473011	89473259	(12517930)	C	L2b	LINE/L2	(6)	3369	3070	1374265
16	8.9	5.3	2.5	chr15	90878988	90879025	(11112164)	+	G-rich	Low_complexity	1	40	(0)	1377294
881	28.5	11.1	2.0	chr15	91338589	91338939	(10652250)	C	LTR16E1	LTR/ERVL	(9)	529	143	1378125
24	26.7	3.1	2.0	chr15	92882610	92882706	(9108483)	+	(GCGGCGG)n	Simple_repeat	1	100	(0)	1380695
16	20.8	2.3	0.0	chr15	92882778	92882821	(9108368)	+	GA-rich	Low_complexity	1	45	(0)	1380696
254	21.5	3.7	7.1	chr15	99486243	99486327	(2504862)	C	L2c	LINE/L2	(50)	3337	3256	1390189
53	3.8	0.0	0.0	chr15	99770685	99770738	(2220451)	+	(AC)n	Simple_repeat	1	54	(0)	1390587
1330	19.2	10.8	8.4	chr15	100392886	100393220	(1597969)	C	MER2	DNA/TcMar-Tigger	(1)	344	1	1391398
579	26.2	13.6	1.8	chr15	100393252	100393523	(1597666)	+	MER110A	LTR/ERV1	3	311	(157)	1391399
251	28.9	15.0	6.3	chr15	100920853	100921232	(1069957)	+	L2b	LINE/L2	2957	3375	(0)	1392090
12	16.3	7.0	2.2	chr15	100973625	100973667	(1017522)	+	G-rich	Low_complexity	1	46	(0)	1392173
462	29.0	11.6	1.4	chr15	101319027	101319243	(671946)	+	MIR	SINE/MIR	21	262	(0)	1392635
19	28.1	4.5	1.1	chr16	2673983	2673996	(87664349)	+	(TGTTTT)n	Simple_repeat	1	19	(73)	1397756
17	12.5	0.0	0.0	chr16	2673997	2674022	(87664323)	+	(T)n	Simple_repeat	1	26	(0)	1397757
19	28.1	4.5	1.1	chr16	2674023	2674070	(87664275)	+	(TGTTTT)n	Simple_repeat	20	92	(0)	1397756
13	21.0	0.0	4.8	chr16	2715458	2715499	(87622846)	+	(GTGG)n	Simple_repeat	1	42	(0)	1397799
909	29.0	5.9	0.9	chr16	2828244	2828567	(87509778)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	1397990
182	32.5	5.7	3.5	chr16	2861233	2861318	(87477027)	C	L2c	LINE/L2	(0)	3387	3300	1398044
353	27.6	1.1	0.0	chr16	2861321	2861407	(87476938)	C	L2a	LINE/L2	(1)	3425	3338	1398045
3295	14.5	1.4	5.9	chr16	2861444	2861816	(87476529)	+	L1PB4	LINE/L1	5552	5913	(243)	1398046
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
1878	22.0	2.5	3.4	chr16	5176300	5176630	(85161715)	+	MLT1C	LTR/ERVL-MaLR	125	444	(23)	1402742
643	28.2	1.9	3.7	chr16	5176644	5176915	(85161430)	C	L1ME3	LINE/L1	(84)	6078	5812	1402741
1496	13.0	0.0	17.3	chr16	7014215	7014567	(83323778)	C	AluSx	SINE/Alu	(16)	296	5	1406356
245	20.4	0.0	1.8	chr16	7182565	7182619	(83155726)	C	MLT1O	LTR/ERVL-MaLR	(22)	520	467	1406687
215	29.0	2.1	9.7	chr16	7246690	7246792	(83091553)	+	L2a	LINE/L2	3315	3409	(17)	1406806
288	31.5	11.1	0.8	chr16	7246805	7246967	(83091378)	+	MIR	SINE/MIR	1	172	(90)	1406808
243	26.7	12.6	0.0	chr16	9039241	9039330	(81299015)	+	L2c	LINE/L2	3231	3333	(54)	1410411
34	0.0	0.0	0.0	chr16	9039371	9039399	(81298946)	+	(AG)n	Simple_repeat	1	29	(0)	1410412
12	8.4	0.0	6.9	chr16	9092305	9092333	(81246012)	+	(CCGGC)n	Simple_repeat	1	29	(0)	1410576
442	25.2	1.0	2.0	chr16	9372090	9372190	(80966155)	C	MIRb	SINE/MIR	(148)	120	21	1411212
1130	19.1	4.1	1.9	chr16	9372213	9372426	(80965919)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1411213
602	27.4	1.2	1.8	chr16	10661775	10661945	(79676400)	+	MIRb	SINE/MIR	76	245	(23)	1413972
742	31.5	1.2	3.2	chr16	10870582	10870827	(79467518)	+	MIRb	SINE/MIR	13	253	(15)	1414444
423	31.2	6.5	3.8	chr16	11285689	11286037	(79052308)	+	L1ME3G	LINE/L1	315	687	(205)	1415316
227	31.9	1.1	3.2	chr16	11461831	11461924	(78876421)	+	Charlie9	DNA/hAT-Charlie	2665	2756	(1)	1415732
48	0.0	0.0	0.0	chr16	11650393	11650433	(78687912)	+	(CA)n	Simple_repeat	1	41	(0)	1416214
2003	12.0	0.0	6.5	chr16	12068195	12068518	(78269827)	+	AluJb	SINE/Alu	1	303	(9)	1417194
1616	16.8	0.4	3.9	chr16	12927419	12927698	(77410647)	C	AluJr	SINE/Alu	(32)	280	11	1418981
687	25.5	1.1	4.6	chr16	12927893	12928172	(77410173)	C	Charlie18a	DNA/hAT-Charlie	(3)	339	70	1418982
223	15.2	15.4	1.5	chr16	13036798	13036864	(77301481)	+	MIRb	SINE/MIR	184	261	(7)	1419244
329	30.2	3.0	3.0	chr16	13036874	13037006	(77301339)	C	MIR	SINE/MIR	(14)	248	116	1419245
1003	27.1	2.1	2.1	chr16	13470864	13471149	(76867196)	C	LTR16E1	LTR/ERVL	(3)	535	250	1420168
231	29.6	4.7	0.0	chr16	13471227	13471307	(76867038)	C	LTR16E1	LTR/ERVL	(453)	85	1	1420168
577	25.9	6.0	8.9	chr16	15765902	15765938	(74572407)	C	MER102b	DNA/hAT-Charlie	(13)	328	297	1425159
1106	21.0	0.0	0.5	chr16	15765939	15766158	(74572187)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1425160
1275	24.3	6.9	5.3	chr16	16614634	16614858	(73723487)	C	L2a	LINE/L2	(0)	3426	3190	1427272
268	28.7	9.2	2.7	chr16	16797393	16797503	(73540842)	C	L2a	LINE/L2	(5)	3421	3303	1427707
1057	27.4	8.7	3.1	chr16	17038469	17039025	(73299320)	+	L2a	LINE/L2	2645	3256	(170)	1428201
422	28.7	0.7	2.0	chr16	17084138	17084290	(73254055)	+	MIR	SINE/MIR	56	206	(56)	1428282
315	28.9	2.9	6.2	chr16	17084278	17084421	(73253924)	C	L2a	LINE/L2	(2)	3424	3286	1428283
1041	12.8	1.4	0.0	chr16	17135388	17135528	(73202817)	+	AluSc8	SINE/Alu	148	290	(21)	1428383
200	30.0	10.0	0.0	chr16	17135530	17135619	(73202726)	+	MER5A	DNA/hAT-Charlie	90	189	(0)	1428384
246	23.8	3.6	1.2	chr16	17135638	17135718	(73202627)	C	MIR3	SINE/MIR	(78)	130	48	1428385
272	27.1	15.0	4.0	chr16	17166314	17166413	(73171932)	+	L2c	LINE/L2	3256	3380	(7)	1428456
197	34.6	0.0	4.9	chr16	17166423	17166504	(73171841)	+	L2b	LINE/L2	3275	3352	(23)	1428457
631	21.7	2.4	4.2	chr16	17311368	17311535	(73026810)	C	MER5A	DNA/hAT-Charlie	(24)	165	1	1428810
873	26.5	3.7	2.9	chr16	17372670	17372910	(72965435)	+	MIR	SINE/MIR	2	244	(18)	1428935
712	24.5	1.6	0.0	chr16	17562638	17562821	(72775524)	+	LTR33	LTR/ERVL	321	507	(8)	1429379
1482	24.4	6.3	4.1	chr16	18738788	18739012	(71599333)	+	L2a	LINE/L2	3190	3426	(0)	1431822
742	32.5	2.3	10.2	chr16	20272095	20272525	(70065820)	C	L2b	LINE/L2	(0)	3375	2980	1435531
697	27.3	7.6	3.8	chr16	21685050	21685130	(68653215)	C	MER102b	DNA/hAT-Charlie	(226)	115	2	1438392
975	27.1	16.1	3.7	chr16	22006873	22007647	(68330698)	+	L2a	LINE/L2	2507	3419	(7)	1439103
547	21.0	11.9	6.2	chr16	23014529	23014872	(67323473)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	58	1441295
33	24.6	1.7	4.1	chr16	23148907	23149025	(67189320)	+	(CGG)n	Simple_repeat	1	121	(0)	1441520
2123	7.4	0.0	0.4	chr16	23641964	23642232	(66696113)	C	AluSx1	SINE/Alu	(44)	268	1	1442767
311	28.0	19.1	0.0	chr16	23974495	23974676	(66363669)	+	L3	LINE/CR1	3832	4056	(43)	1443588
20	19.8	2.1	0.0	chr16	24858429	24858476	(65479869)	+	(TGGA)n	Simple_repeat	1	49	(0)	1445677
856	26.7	14.4	2.8	chr16	26951756	26952225	(63386120)	C	LTR16E1	LTR/ERVL	(4)	534	1	1450039
20	23.7	6.1	2.9	chr16	27313782	27313907	(63024438)	+	G-rich	Low_complexity	1	130	(0)	1450853
346	24.9	6.0	0.5	chr16	27795960	27796082	(62542263)	C	MIR1_Amn	SINE/MIR	(24)	184	61	1451946
517	29.3	7.2	6.8	chr16	27921130	27921422	(62416923)	C	MamRep38	DNA/hAT	(0)	295	2	1452237
473	21.1	13.9	2.7	chr16	28088094	28088239	(62250106)	+	MER91A	DNA/hAT-Tip100	5	169	(27)	1452645
181	28.9	1.9	0.0	chr16	28298329	28298380	(62039965)	C	MIRb	SINE/MIR	(47)	221	169	1453133
768	25.9	1.6	0.5	chr16	28298445	28298630	(62039715)	+	MIR	SINE/MIR	38	225	(37)	1453134
705	26.9	4.4	0.0	chr16	28303994	28304209	(62034136)	+	L1ME4b	LINE/L1	315	540	(352)	1453146
586	21.0	12.7	1.1	chr16	28304396	28304576	(62033769)	+	MIRb	SINE/MIR	20	225	(43)	1453147
404	15.2	17.6	0.0	chr16	29785438	29785549	(60552796)	+	LTR64	LTR/ERV1	393	528	(0)	1456563
20	31.1	3.9	0.9	chr16	29812107	29812217	(60526128)	+	G-rich	Low_complexity	1	114	(0)	1456616
14	20.2	0.0	0.0	chr16	29812228	29812261	(60526084)	+	(CCTC)n	Simple_repeat	1	34	(0)	1456617
14	12.8	0.0	7.5	chr16	29898159	29898198	(60440147)	+	(CTCCC)n	Simple_repeat	1	40	(0)	1456813
17	20.2	1.6	6.2	chr16	29898199	29898204	(60440141)	+	(CTCCCCT)n	Simple_repeat	46	65	(0)	1456812
13	23.5	0.0	0.0	chr16	29900111	29900145	(60438200)	+	(GCCCG)n	Simple_repeat	1	35	(0)	1456817
16	16.9	0.0	0.0	chr16	29900223	29900255	(60438090)	+	(CCGA)n	Simple_repeat	1	33	(0)	1456818
318	29.8	10.7	0.0	chr16	30094065	30094222	(60244123)	C	MIRc	SINE/MIR	(31)	237	61	1457249
1800	15.6	1.7	3.0	chr16	30921291	30921591	(59416754)	+	AluJr	SINE/Alu	13	309	(3)	1459202
1695	11.5	5.0	4.1	chr16	47787559	47787875	(42550470)	C	L1MA2	LINE/L1	(0)	6304	5985	1467639
960	24.9	2.4	2.0	chr16	49126948	49127201	(41211144)	+	MIR	SINE/MIR	8	262	(0)	1470031
186	25.7	1.4	16.7	chr16	49127175	49127258	(41211087)	+	L2c	LINE/L2	3240	3310	(77)	1470032
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
14	17.0	0.0	2.9	chr16	49280378	49280412	(41057933)	+	(CCCT)n	Simple_repeat	1	35	(0)	1470269
335	36.3	8.6	0.0	chr16	49345822	49345992	(40992353)	C	MIRb	SINE/MIR	(73)	195	9	1470369
90	34.8	0.8	1.1	chr16	49350798	49351151	(40987194)	+	(AC)n	Simple_repeat	1	357	(0)	1470377
210	28.8	0.0	0.0	chr16	49351323	49351381	(40986964)	+	L2b	LINE/L2	3315	3373	(2)	1470378
20	10.4	4.7	2.2	chr16	49857304	49857386	(40480959)	+	(GGC)n	Simple_repeat	1	85	(0)	1471245
272	35.7	10.8	3.2	chr16	50155488	50155675	(40182670)	+	LFSINE_Vert	SINE/tRNA	119	322	(137)	1471937
256	25.7	4.1	0.0	chr16	51103728	51103797	(39234548)	+	LTR16E1	LTR/ERVL	9	81	(457)	1473761
510	22.6	2.7	4.3	chr16	52515333	52515517	(37822828)	C	MamRep564	Unknown	(112)	245	64	1476108
236	35.5	5.3	10.4	chr16	55418861	55419397	(34918948)	+	L2a	LINE/L2	2527	3034	(385)	1481377
711	25.0	13.3	0.5	chr16	55710726	55710922	(34627423)	C	MIR	SINE/MIR	(24)	238	13	1481853
376	32.0	0.0	3.2	chr16	56013967	56014092	(34324253)	+	MIRb	SINE/MIR	118	239	(29)	1482380
11	18.7	4.3	4.2	chr16	56193219	56193264	(34145081)	+	G-rich	Low_complexity	1	48	(0)	1482664
12	28.7	0.0	2.1	chr16	56194521	56194568	(34143777)	+	(GGCTC)n	Simple_repeat	1	48	(0)	1482665
236	31.0	8.8	0.7	chr16	56646036	56646181	(33692164)	C	MIRc	SINE/MIR	(27)	241	83	1483477
2266	6.5	0.0	0.0	chr16	56676430	56676706	(33661639)	C	AluY	SINE/Alu	(0)	311	35	1483528
220	23.2	15.9	0.4	chr16	56676712	56676813	(33661532)	C	MIRc	SINE/MIR	(117)	151	36	1483529
1737	16.3	3.3	1.7	chr16	57030828	57031128	(33307217)	+	AluJb	SINE/Alu	2	307	(5)	1484204
17	11.2	0.0	0.0	chr16	57043761	57043789	(33294556)	+	(TGAA)n	Simple_repeat	1	29	(0)	1484229
13	9.8	0.0	0.0	chr16	57186403	57186424	(33151921)	+	(CGC)n	Simple_repeat	1	22	(0)	1484533
431	21.3	0.9	8.5	chr16	57810710	57810827	(32527518)	C	MIRb	SINE/MIR	(36)	232	124	1485788
233	21.3	1.6	3.2	chr16	57875385	57875447	(32462898)	+	L2a	LINE/L2	3364	3425	(1)	1485954
323	11.6	0.0	0.0	chr16	67485197	67485239	(22853106)	C	AluJo	SINE/Alu	(19)	293	251	1501697
18	14.8	7.4	1.7	chr16	67652857	67652910	(22685435)	+	(GCG)n	Simple_repeat	1	58	(0)	1502110
13	26.3	1.6	4.6	chr16	67661134	67661197	(22677148)	+	(TCCCTCT)n	Simple_repeat	1	65	(0)	1502114
15	8.8	0.0	0.0	chr16	68448443	68448466	(21889879)	+	(GGC)n	Simple_repeat	1	24	(0)	1503545
2475	7.3	0.0	1.0	chr16	71316422	71316734	(19021611)	C	AluY	SINE/Alu	(0)	311	2	1509445
16	0.0	0.0	0.0	chr16	71467961	71467977	(18870368)	+	(G)n	Simple_repeat	1	17	(0)	1509741
2183	10.9	1.0	0.0	chr16	71468075	71468359	(18869986)	C	AluSq2	SINE/Alu	(25)	288	1	1509742
376	25.6	7.7	0.7	chr16	77557591	77557757	(12780588)	+	MIRc	SINE/MIR	22	198	(64)	1520047
37	0.0	0.0	0.0	chr16	77975195	77975228	(12363117)	+	(T)n	Simple_repeat	1	34	(0)	1520873
2098	10.5	0.0	0.7	chr16	77975235	77975511	(12362834)	C	AluSx1	SINE/Alu	(37)	275	1	1520874
257	30.5	7.8	0.0	chr16	81738403	81738497	(8599848)	+	MIR1_Amn	SINE/MIR	87	189	(41)	1527903
658	21.3	7.6	0.5	chr16	81738543	81738726	(8599619)	C	MER20	DNA/hAT-Charlie	(3)	216	19	1527904
746	23.9	2.2	0.0	chr16	81864099	81864274	(8474071)	C	MER5A	DNA/hAT-Charlie	(6)	183	4	1528225
721	25.6	6.7	0.0	chr16	81864286	81864480	(8473865)	C	MER3	DNA/hAT-Charlie	(0)	209	1	1528226
252	31.9	8.0	8.3	chr16	82704420	82704696	(7633649)	C	L2c	LINE/L2	(0)	3387	3112	1529681
14	15.6	0.0	0.0	chr16	82859722	82859750	(7478595)	+	A-rich	Low_complexity	1	29	(0)	1529948
977	27.9	9.0	7.4	chr16	83058996	83059522	(7278823)	C	LTR16E1	LTR/ERVL	(0)	538	3	1530298
421	26.2	7.2	7.2	chr16	87263623	87263815	(3074530)	+	MIRb	SINE/MIR	27	219	(49)	1538116
15	26.4	0.0	0.0	chr16	87263873	87263917	(3074428)	+	(CCAGCC)n	Simple_repeat	1	45	(0)	1538117
1179	21.8	2.4	1.4	chr16	87264009	87264204	(3074141)	+	MER33	DNA/hAT-Charlie	34	235	(89)	1538118
14	12.6	0.0	0.0	chr16	87608555	87608581	(2729764)	+	(GGAGA)n	Simple_repeat	1	27	(0)	1538772
2008	13.2	1.0	0.3	chr16	87608757	87609051	(2729294)	+	AluJb	SINE/Alu	2	298	(14)	1538773
236	26.3	5.9	1.0	chr16	87661753	87661848	(2676497)	+	Charlie4a	DNA/hAT-Charlie	26	126	(382)	1538871
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
218	27.9	16.1	1.2	chr16	89009356	89009519	(1328826)	+	MIRc	SINE/MIR	51	235	(33)	1540693
33	24.3	5.0	0.0	chr16	89009723	89009834	(1328511)	+	GA-rich	Low_complexity	1	117	(0)	1540694
390	29.5	4.9	0.0	chr16	89010469	89010641	(1327704)	C	MLT2F	LTR/ERVL	(279)	384	203	1540697
208	32.8	2.4	5.4	chr16	89033964	89034092	(1304253)	C	MIR3	SINE/MIR	(77)	131	7	1540727
12	30.4	1.2	5.8	chr16	89721182	89721266	(617079)	+	(CCCCCGC)n	Simple_repeat	1	86	(0)	1541726
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
167	30.3	0.6	0.6	chr17	812557	813060	(82444381)	+	(GT)n	Simple_repeat	1	507	(0)	1545822
2470	4.4	1.3	0.0	chr17	1323552	1323846	(81933595)	+	AluSq2	SINE/Alu	1	299	(14)	1546850
241	33.0	3.6	5.4	chr17	1476501	1476612	(81780829)	+	MIRb	SINE/MIR	22	131	(137)	1547216
542	26.9	13.5	5.3	chr17	1631841	1632083	(81625358)	+	L2c	LINE/L2	3117	3382	(5)	1547500
14	23.8	0.0	5.5	chr17	2050240	2050294	(81207147)	+	(GCCGCG)n	Simple_repeat	1	55	(0)	1548359
289	30.7	1.3	0.0	chr17	3717644	3717718	(79539723)	+	L3	LINE/CR1	4003	4078	(21)	1551572
29	3.0	5.1	7.3	chr17	3795776	3795853	(79461588)	+	(TGTGTGCATC)n	Simple_repeat	1	82	(0)	1551752
762	20.5	10.5	8.0	chr17	4049539	4049641	(79207800)	C	MIR	SINE/MIR	(147)	115	2	1552258
673	27.9	8.7	4.0	chr17	4493106	4493378	(78764063)	C	L2c	LINE/L2	(0)	3387	3101	1553204
475	35.8	9.0	4.9	chr17	4493552	4493706	(78763735)	C	L2c	LINE/L2	(377)	3042	2891	1553204
1839	15.7	4.5	0.0	chr17	4808700	4808993	(78448448)	C	AluJo	SINE/Alu	(4)	308	1	1553829
15	27.8	2.9	4.2	chr17	4939941	4940010	(78317431)	+	(CG)n	Simple_repeat	1	72	(0)	1554105
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
395	27.0	10.9	4.7	chr17	5234403	5234626	(78022815)	C	MIRb	SINE/MIR	(26)	242	1	1554689
304	31.9	7.7	3.4	chr17	5593553	5593701	(77663740)	+	L2a	LINE/L2	3271	3426	(0)	1555429
719	24.0	8.0	1.9	chr17	6526659	6526870	(76730571)	C	MIR	SINE/MIR	(9)	253	28	1557258
13	15.9	2.6	5.0	chr17	7014818	7014856	(76242585)	+	(GCG)n	Simple_repeat	1	40	(0)	1558088
439	31.8	9.7	1.5	chr17	7081589	7081958	(76175483)	C	LTR16A	LTR/ERVL	(0)	451	1	1558189
30	20.5	1.2	3.5	chr17	7307644	7307727	(75949714)	+	(GCG)n	Simple_repeat	1	85	(0)	1558609
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
2720	19.7	11.3	4.1	chr17	7685737	7685956	(75571485)	+	L1ME2	LINE/L1	5919	6157	(7)	1559334
12	10.4	6.1	2.9	chr17	7842563	7842595	(75414846)	+	(AGAGTG)n	Simple_repeat	1	35	(0)	1559627
262	28.7	2.3	9.6	chr17	9230890	9231081	(74026360)	C	MIR3	SINE/MIR	(23)	185	12	1562283
248	36.0	10.0	3.6	chr17	10022485	10022709	(73234732)	+	MIRb	SINE/MIR	15	255	(13)	1563887
620	24.6	2.6	5.0	chr17	10875226	10875419	(72382022)	C	MIR	SINE/MIR	(26)	236	57	1565460
424	28.6	5.3	10.4	chr17	10875633	10875841	(72381600)	+	L2b	LINE/L2	3186	3382	(5)	1565461
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
286	28.6	3.0	2.0	chr17	13078629	13078728	(70178713)	C	MIR3	SINE/MIR	(0)	208	108	1569179
499	26.9	2.9	0.7	chr17	16428594	16428728	(66828713)	C	MIRc	SINE/MIR	(39)	229	92	1574970
1085	21.2	3.8	0.0	chr17	16584038	16584315	(66673126)	+	L1M4	LINE/L1	3112	3400	(2746)	1575251
297	24.2	7.5	5.7	chr17	16812253	16812357	(66445084)	+	L2c	LINE/L2	3280	3386	(1)	1575606
212	18.2	0.0	5.7	chr17	17540855	17540906	(65716535)	+	L2b	LINE/L2	3332	3383	(4)	1576828
14	27.1	1.4	5.4	chr17	17783638	17783710	(65473731)	+	(GCCCGC)n	Simple_repeat	1	74	(0)	1577347
259	28.4	3.1	3.1	chr17	20440843	20440940	(62816501)	+	L2c	LINE/L2	3289	3386	(1)	1582483
20	3.7	0.0	0.0	chr17	21172437	21172464	(62084977)	+	(GGGGT)n	Simple_repeat	1	28	(0)	1583789
288	28.7	7.3	2.5	chr17	27657799	27657916	(55599525)	C	L2b	LINE/L2	(0)	3375	3252	1587212
480	28.9	11.4	5.9	chr17	27659798	27659837	(55597604)	+	MIRb	SINE/MIR	216	258	(10)	1587215
2121	12.8	1.3	1.0	chr17	27659988	27660285	(55597156)	C	AluSz	SINE/Alu	(12)	300	2	1587217
265	25.7	15.3	1.9	chr17	27763091	27763197	(55494244)	C	L2b	LINE/L2	(0)	3375	3252	1587359
525	30.6	12.7	0.5	chr17	28253724	28253930	(55003511)	+	MIRb	SINE/MIR	15	250	(18)	1588336
2230	8.2	0.3	5.0	chr17	28373986	28374303	(54883138)	+	AluSx1	SINE/Alu	2	304	(8)	1588531
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
346	33.5	10.4	6.9	chr17	31393551	31394069	(51863372)	C	L3	LINE/CR1	(175)	3924	3386	1594480
460	32.7	9.0	0.9	chr17	31394573	31394797	(51862644)	C	L3	LINE/CR1	(727)	3372	3128	1594480
648	27.1	7.8	2.1	chr17	31400389	31400667	(51856774)	C	L2b	LINE/L2	(484)	2935	2640	1594491
254	25.8	2.9	0.0	chr17	31673324	31673389	(51584052)	C	MIRc	SINE/MIR	(118)	150	83	1595053
32	3.0	0.0	0.0	chr17	32487008	32487041	(50770400)	+	(GCC)n	Simple_repeat	1	34	(0)	1596916
800	18.9	0.6	2.5	chr17	33228192	33228354	(50029087)	+	L1MB5	LINE/L1	6015	6174	(0)	1598220
12	31.6	1.6	1.6	chr17	33328426	33328486	(49928955)	+	(TCTTCCC)n	Simple_repeat	1	62	(0)	1598446
804	27.6	2.4	0.4	chr17	33732026	33732269	(49525172)	+	L1ME4b	LINE/L1	298	546	(346)	1599213
419	26.3	4.8	1.7	chr17	33732290	33732409	(49525032)	C	L2a	LINE/L2	(6)	3420	3297	1599214
27379	3.7	0.2	0.4	chr17	34083022	34089185	(49168256)	C	L1PA3	LINE/L1	(0)	6155	1	1599851
356	24.1	6.7	5.1	chr17	34089190	34089307	(49168134)	C	L2a	LINE/L2	(0)	3426	3307	1599852
4099	27.7	7.6	5.7	chr17	34290871	34292439	(48965002)	C	ERV3-16A3_I-int	LTR/ERVL	(2)	5224	3625	1600165
292	34.2	16.3	4.2	chr17	34498910	34499877	(48757564)	C	L2c	LINE/L2	(185)	3202	2110	1600510
570	25.7	0.7	0.0	chr17	34703881	34704028	(48553413)	C	MamRep564	Unknown	(117)	240	92	1600905
390	15.6	1.0	5.0	chr17	34706006	34706106	(48551335)	+	L1MA8	LINE/L1	6195	6291	(0)	1600909
401	27.2	1.7	2.6	chr17	34706288	34706404	(48551037)	C	MIR3	SINE/MIR	(14)	194	79	1600910
440	37.9	9.1	5.2	chr17	34797942	34798362	(48459079)	+	L2b	LINE/L2	2918	3356	(19)	1601091
230	34.8	0.0	0.0	chr17	35359456	35359524	(47897917)	+	MIR3	SINE/MIR	54	122	(86)	1602134
208	28.1	12.0	0.8	chr17	35742970	35743086	(47514355)	+	MIR3	SINE/MIR	3	128	(140)	1602709
20	13.4	0.0	4.4	chr17	36486832	36486876	(46770565)	+	(GGCG)n	Simple_repeat	1	45	(0)	1604032
1042	8.0	0.0	2.9	chr17	36777073	36777209	(46480232)	C	AluSz	SINE/Alu	(179)	133	1	1604618
193	19.7	0.0	0.0	chr17	36777212	36777256	(46480185)	C	MIRc	SINE/MIR	(56)	152	108	1604619
433	29.7	5.8	0.4	chr17	38560145	38560292	(44697149)	C	MIR3	SINE/MIR	(21)	187	37	1608093
254	28.6	9.7	0.0	chr17	38561120	38561203	(44696238)	C	MIR3	SINE/MIR	(25)	183	91	1608096
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
2172	22.4	2.6	4.4	chr17	40531534	40532051	(42725390)	+	MLT1F2	LTR/ERVL-MaLR	53	560	(0)	1612252
343	21.6	13.7	0.0	chr17	40619969	40620056	(42637385)	+	MER81	DNA/hAT-Blackjack	1	102	(12)	1612393
399	30.0	19.9	0.2	chr17	40806156	40806450	(42450991)	+	L2c	LINE/L2	3029	3387	(0)	1612679
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
21	23.8	3.9	4.7	chr17	42423106	42423207	(40834234)	+	(GGAGCG)n	Simple_repeat	1	106	(0)	1615601
22	25.1	3.0	0.0	chr17	44199958	44200024	(39057417)	+	(CCT)n	Simple_repeat	1	69	(0)	1619433
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
210	28.6	0.0	2.0	chr17	45653741	45653790	(37603651)	+	L3b	LINE/CR1	5174	5222	(10)	1622523
834	20.6	1.1	3.3	chr17	45653844	45654024	(37603417)	C	Arthur1A	DNA/hAT-Tip100	(0)	177	1	1622524
11	20.2	2.9	0.0	chr17	45768209	45768242	(37489199)	+	(CTCCTT)n	Simple_repeat	1	35	(0)	1622749
366	31.6	10.0	3.6	chr17	45858279	45858501	(37398940)	C	MLT1O	LTR/ERVL-MaLR	(8)	534	296	1622920
456	26.4	10.2	0.2	chr17	46777930	46778117	(36479324)	+	MIR	SINE/MIR	28	268	(0)	1624696
494	22.8	2.8	3.7	chr17	46964583	46964722	(36292719)	C	MIR3	SINE/MIR	(28)	180	35	1625057
1709	19.7	5.2	0.6	chr17	46983689	46984035	(36273406)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	206	1625102
974	23.2	12.5	3.6	chr17	47707860	47708163	(35549278)	C	Charlie23a	DNA/hAT-Charlie	(4)	335	1	1626592
215	31.2	5.1	1.8	chr17	47708181	47708294	(35549147)	C	L2b	LINE/L2	(217)	3170	3050	1626591
205	33.5	9.0	2.6	chr17	47714112	47714267	(35543174)	+	L3b	LINE/CR1	4863	5029	(203)	1626597
12	25.6	0.0	0.0	chr17	48225820	48225856	(35031585)	+	(GAGTTAA)n	Simple_repeat	1	37	(0)	1627492
12	19.9	0.0	0.0	chr17	49707873	49707901	(33549540)	+	(CGG)n	Simple_repeat	1	29	(0)	1630436
577	30.0	5.2	4.4	chr17	50632025	50632272	(32625169)	C	L2b	LINE/L2	(2)	3373	3124	1632141
817	18.0	0.0	0.8	chr17	51869628	51869755	(31387686)	+	AluJr	SINE/Alu	1	127	(185)	1634567
69	1.4	2.7	0.0	chr17	52160795	52160867	(31096574)	+	(TTTC)n	Simple_repeat	1	75	(0)	1634987
10107	12.6	3.4	1.1	chr17	56145841	56147345	(27110096)	C	THE1D-int	LTR/ERVL-MaLR	(38)	1542	2	1640818
413	29.2	10.0	0.8	chr17	57755523	57755767	(25501674)	C	Tigger8	DNA/TcMar-Tigger	(369)	298	29	1643781
758	20.6	1.9	0.0	chr17	58166209	58166363	(25091078)	+	MER5A	DNA/hAT-Charlie	4	161	(28)	1644577
3348	17.7	11.1	0.2	chr17	58172029	58172995	(25084446)	+	L1M4	LINE/L1	421	1499	(4248)	1644585
727	22.4	4.4	0.6	chr17	58176228	58176402	(25081039)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	1644590
2009	25.5	10.2	3.1	chr17	58187904	58188842	(25068599)	+	MER97b	DNA/hAT-Tip100	8	1020	(29)	1644615
14	24.1	0.0	0.0	chr17	58756637	58756675	(24500766)	+	(CCCGCC)n	Simple_repeat	1	39	(0)	1645701
254	27.2	2.4	0.0	chr17	60586861	60586941	(22670500)	+	MLT1O	LTR/ERVL-MaLR	424	506	(36)	1649597
1977	14.6	0.0	2.6	chr17	62111386	62111687	(21145754)	C	AluSq2	SINE/Alu	(19)	294	1	1652287
16	5.3	0.0	0.0	chr17	62111773	62111792	(21145649)	+	(A)n	Simple_repeat	1	20	(0)	1652288
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
14	27.5	2.9	2.8	chr17	63699781	63699849	(19557592)	+	(GCCCCGA)n	Simple_repeat	1	71	(0)	1655191
1033	24.1	17.5	2.6	chr17	65254207	65254623	(18002818)	C	LTR16A2	LTR/ERVL	(2)	493	2	1658304
1515	18.2	5.5	1.3	chr17	66675106	66675416	(16582025)	C	MLT1A0	LTR/ERVL-MaLR	(40)	325	1	1660635
857	21.6	4.6	0.5	chr17	66972321	66972529	(16284912)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1661154
832	27.2	12.4	3.2	chr17	67012453	67012832	(16244609)	C	LTR16E2	LTR/ERVL	(115)	453	34	1661240
321	28.1	0.0	2.4	chr17	68320489	68320572	(14936869)	C	L2a	LINE/L2	(45)	3381	3300	1663969
277	26.0	4.0	7.7	chr17	69567399	69567502	(13689939)	+	Charlie4z	DNA/hAT-Charlie	15	114	(53)	1665989
902	29.4	9.2	0.7	chr17	69763477	69763891	(13493550)	+	Helitron3Na_Mam	RC/Helitron	33	486	(0)	1666280
231	25.0	0.0	1.8	chr17	72117286	72117342	(11140099)	C	L2a	LINE/L2	(0)	3426	3371	1669831
13	7.6	7.1	0.0	chr17	72336632	72336659	(10920782)	+	(TTTCT)n	Simple_repeat	1	30	(0)	1670208
966	21.6	0.0	0.0	chr17	72336723	72336912	(10920529)	+	MER3	DNA/hAT-Charlie	1	190	(19)	1670209
760	26.1	4.0	2.6	chr17	72720637	72720876	(10536565)	C	MIR	SINE/MIR	(21)	241	3	1670895
278	37.2	10.8	0.9	chr17	74190717	74190949	(9066492)	C	L2c	LINE/L2	(65)	3322	3064	1673661
276	23.8	5.4	5.4	chr17	74453398	74453508	(8803933)	+	MIRc	SINE/MIR	35	145	(123)	1674185
375	32.9	18.8	1.5	chr17	74610013	74610669	(8646772)	+	L2c	LINE/L2	1898	2694	(725)	1674458
28	23.7	1.4	0.0	chr17	74776580	74776653	(8480788)	+	(GTCGG)n	Simple_repeat	1	75	(0)	1674793
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
243	39.3	2.4	0.8	chr17	74937694	74937816	(8319625)	C	L2c	LINE/L2	(6)	3381	3257	1675030
2176	13.0	0.0	0.3	chr17	75273761	75274060	(7983381)	C	AluSx	SINE/Alu	(12)	300	2	1675726
18	15.8	2.3	2.2	chr17	76265361	76265404	(6992037)	+	(GGC)n	Simple_repeat	1	45	(0)	1677698
202	29.8	4.0	4.8	chr17	76557890	76558010	(6699431)	+	MIR	SINE/MIR	96	216	(52)	1678274
2301	10.6	0.6	1.3	chr17	76839511	76839822	(6417619)	C	AluSx	SINE/Alu	(2)	310	1	1678868
605	19.0	9.6	7.7	chr17	76839823	76839910	(6417531)	+	MER3	DNA/hAT-Charlie	132	207	(2)	1678867
399	29.7	19.9	0.7	chr17	76839931	76840367	(6417074)	+	L2b	LINE/L2	2297	2838	(581)	1678869
230	22.7	19.1	4.3	chr17	76921081	76921195	(6336246)	C	L2c	LINE/L2	(228)	3159	3024	1679037
2516	13.5	1.2	3.4	chr17	77021033	77021468	(6235973)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	1679261
252	23.5	1.0	0.0	chr17	77926252	77926314	(5331127)	C	L2a	LINE/L2	(0)	3426	3321	1680896
346	32.7	18.6	3.0	chr17	78381888	78382281	(4875160)	C	L2c	LINE/L2	(1)	3386	2918	1681766
271	18.6	3.3	0.0	chr17	78898669	78898727	(4358714)	C	MER5A1	DNA/hAT-Charlie	(40)	126	66	1682646
2430	10.1	0.0	0.0	chr17	78898728	78899034	(4358407)	C	AluSz	SINE/Alu	(2)	310	4	1682647
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
2297	10.4	0.0	0.0	chr17	79337942	79338238	(3919203)	C	AluSx1	SINE/Alu	(15)	297	1	1683304
366	27.6	1.3	7.7	chr17	80441702	80441870	(2815571)	C	MLT1K	LTR/ERVL-MaLR	(245)	350	193	1685020
2120	15.6	0.0	0.7	chr17	80755461	80755768	(2501673)	+	AluSz6	SINE/Alu	7	312	(0)	1685483
254	23.5	23.5	0.0	chr17	80755896	80756048	(2501393)	+	L1MEh	LINE/L1	724	923	(1312)	1685484
26	21.8	0.0	0.0	chr17	81242635	81242687	(2014754)	+	G-rich	Low_complexity	1	53	(0)	1686026
1795	15.6	3.6	1.0	chr17	81930384	81930684	(1326757)	+	AluJo	SINE/Alu	1	309	(3)	1686919
17886	13.0	2.9	2.3	chr18	4224007	4230922	(76142363)	+	L1MA3	LINE/L1	766	7724	(0)	1695716
313	32.5	11.2	2.5	chr18	5108171	5108407	(75264878)	+	MIR	SINE/MIR	1	260	(2)	1696816
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
9713	11.9	2.8	0.9	chr18	5268010	5270259	(75103026)	+	L1MA2	LINE/L1	2940	5238	(2327)	1697015
243	26.7	5.5	3.4	chr18	5370404	5370492	(75002793)	+	Charlie1b	DNA/hAT-Charlie	423	513	(10)	1697161
309	32.2	5.7	0.0	chr18	5868564	5868678	(74504607)	+	MER5B	DNA/hAT-Charlie	57	178	(0)	1697802
130	2.4	0.0	0.0	chr18	5972850	5972976	(74400309)	+	(AATAG)n	Simple_repeat	1	127	(0)	1697944
181	26.4	3.6	0.0	chr18	5973011	5973063	(74400222)	+	MIR	SINE/MIR	207	261	(1)	1697943
2355	11.7	11.9	0.5	chr18	8895109	8895487	(71477798)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1702066
14683	11.9	1.2	3.0	chr18	8908670	8910234	(71463051)	+	MER41-int	LTR/ERV1	4405	5946	(0)	1702077
420	25.0	2.0	0.0	chr18	11579149	11579248	(68794037)	+	MER5A	DNA/hAT-Charlie	1	102	(87)	1706009
381	32.5	2.9	6.5	chr18	12311087	12311300	(68061985)	C	HAL1	LINE/L1	(0)	2507	2302	1707187
2036	20.7	11.2	6.0	chr18	12407569	12407658	(67965627)	+	MER67C	LTR/ERV1	606	710	(1)	1707387
7868	8.7	20.2	0.2	chr18	13133964	13135223	(67238062)	C	LTR12C	LTR/ERV1	(0)	1579	3	1708693
12	11.1	4.3	8.3	chr18	13233476	13233521	(67139764)	+	(TGTCTC)n	Simple_repeat	1	48	(0)	1708835
1036	15.6	0.7	0.0	chr18	13303252	13303405	(67069880)	C	AluJr	SINE/Alu	(17)	295	141	1708920
4473	27.1	7.7	1.9	chr18	13315805	13317202	(67056083)	+	L1MEg	LINE/L1	1112	2603	(3716)	1708936
267	28.0	10.8	1.3	chr18	22152126	22152243	(58221042)	C	L2b	LINE/L2	(4)	3383	3258	1714054
325	27.9	14.1	3.8	chr18	22152376	22152584	(58220701)	+	MIRb	SINE/MIR	33	266	(2)	1714055
13	14.4	3.2	0.0	chr18	23586439	23586469	(56786816)	+	(GCAGGA)n	Simple_repeat	1	32	(0)	1716472
441	28.8	11.1	4.8	chr18	23664671	23664854	(56708431)	C	MIRb	SINE/MIR	(3)	259	16	1716630
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
608	29.2	7.6	3.8	chr18	26594137	26594428	(53778857)	+	LTR79	LTR/ERVL	220	523	(4)	1721183
15	9.7	6.1	0.0	chr18	28175585	28175617	(52197668)	+	(CCAGCC)n	Simple_repeat	1	35	(0)	1723414
224	20.3	8.6	4.5	chr18	29980043	29980109	(50393176)	+	L2a	LINE/L2	3355	3424	(2)	1725722
3451	15.2	4.3	7.1	chr18	35775829	35775993	(44597292)	+	LTR8A	LTR/ERV1	572	727	(0)	1733791
1134	24.0	14.1	2.5	chr18	36275268	36275872	(44097413)	+	L1MEd	LINE/L1	856	1583	(4659)	1734577
2199	14.4	0.0	1.6	chr18	36275873	36276185	(44097100)	C	AluSz	SINE/Alu	(4)	308	1	1734578
256	31.7	9.8	0.8	chr18	37269404	37269524	(43103761)	+	MER5B	DNA/hAT-Charlie	41	173	(5)	1735827
357	25.6	10.7	0.8	chr18	38077202	38077434	(42295851)	+	L2a	LINE/L2	3095	3417	(9)	1736900
256	32.1	4.1	3.5	chr18	38077447	38077591	(42295694)	+	MLT1K	LTR/ERVL-MaLR	448	593	(2)	1736899
275	26.9	12.6	5.0	chr18	42296744	42296949	(38076336)	C	MIR	SINE/MIR	(0)	262	8	1742640
1588	23.5	5.5	0.0	chr18	42351149	42351544	(38021741)	C	MER68C	LTR/ERVL	(0)	419	1	1742718
3757	14.1	1.9	5.3	chr18	42351718	42352143	(38021142)	C	MER39B	LTR/ERV1	(0)	653	246	1742719
189	32.0	0.0	0.0	chr18	44246285	44246334	(36126951)	C	MIRb	SINE/MIR	(8)	260	211	1745281
681	29.8	5.9	7.7	chr18	44799536	44799913	(35573372)	C	LTR33	LTR/ERVL	(89)	426	56	1745981
415	37.3	4.1	0.9	chr18	44916680	44916890	(35456395)	+	MIRc	SINE/MIR	3	220	(48)	1746145
16	5.2	0.0	0.0	chr18	48784747	48784766	(31588519)	+	(AG)n	Simple_repeat	1	20	(0)	1752437
282	31.3	16.7	1.6	chr18	49898443	49898624	(30474661)	+	L4_A_Mam	LINE/RTE-X	4402	4616	(374)	1754346
255	34.6	1.4	2.2	chr18	49898726	49898864	(30474421)	+	L4_A_Mam	LINE/RTE-X	4746	4883	(107)	1754346
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
207	22.8	10.2	3.7	chr18	50968522	50968603	(29404682)	C	MER5B	DNA/hAT-Charlie	(4)	174	87	1756119
437	31.7	6.0	1.1	chr18	51645546	51645736	(28727549)	+	L2b	LINE/L2	2253	2453	(966)	1757308
13	15.8	2.7	2.6	chr18	51867898	51867934	(28505351)	+	A-rich	Low_complexity	1	38	(0)	1757631
17258	13.9	2.9	2.0	chr18	51868021	51872367	(28500918)	C	L1PA16	LINE/L1	(0)	6869	2516	1757632
18	15.5	0.0	0.0	chr18	55322235	55322264	(25051021)	+	(CT)n	Simple_repeat	1	30	(0)	1762524
23	3.7	0.0	0.0	chr18	55322423	55322450	(25050835)	+	(A)n	Simple_repeat	1	28	(0)	1762525
18	21.5	2.3	2.2	chr18	57094289	57094341	(23278944)	+	GA-rich	Low_complexity	1	53	(0)	1765044
675	24.3	8.7	0.0	chr18	57404708	57404896	(22968389)	+	MIR	SINE/MIR	1	207	(55)	1765509
1992	11.7	0.3	1.1	chr18	57687774	57688081	(22685204)	C	AluSz6	SINE/Alu	(0)	312	2	1765998
288	29.1	11.3	3.4	chr18	59140223	59140489	(21232796)	+	L3	LINE/CR1	3634	3924	(175)	1768507
201	27.7	1.6	11.3	chr18	62497368	62497492	(17875793)	C	L2c	LINE/L2	(16)	3371	3236	1773550
2402	9.2	0.0	0.0	chr18	62497704	62498007	(17875278)	+	AluY	SINE/Alu	1	304	(7)	1773551
904	31.2	8.5	7.2	chr18	68934805	68935833	(11437452)	C	L2a	LINE/L2	(1)	3425	2090	1782510
1496	18.2	11.6	0.9	chr18	68935955	68936276	(11437009)	+	Tigger4b	DNA/TcMar-Tigger	1	361	(0)	1782511
68	4.2	1.9	4.5	chr18	73908575	73908682	(6464603)	+	(TCTT)n	Simple_repeat	1	110	(0)	1789201
360	18.4	24.7	0.0	chr18	75395189	75395313	(4977972)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	1790958
277	26.1	4.3	6.9	chr18	75395485	75395522	(4977763)	C	MamRep434	DNA/TcMar-Tigger	(228)	198	165	1790959
653	33.5	13.1	3.5	chr18	77360911	77361329	(3011956)	+	L2a	LINE/L2	2003	2468	(951)	1793393
1725	17.6	11.0	5.7	chr18	77556744	77557111	(2816174)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1793651
229	31.4	12.3	0.8	chr19	345134	345255	(58272361)	C	MIRb	SINE/MIR	(107)	161	24	1796773
209	30.0	4.8	3.6	chr19	482717	482799	(58134817)	C	MIRc	SINE/MIR	(173)	95	12	1796996
13	8.8	0.0	3.9	chr19	572575	572600	(58045016)	+	(GCG)n	Simple_repeat	1	26	(0)	1797176
17	2.4	10.4	5.7	chr19	591577	591624	(58025992)	+	(GTGAGGT)n	Simple_repeat	1	53	(0)	1797193
18	19.9	1.5	6.1	chr19	797519	797583	(57820033)	+	(CGCCC)n	Simple_repeat	1	66	(0)	1797635
336	31.0	3.7	3.1	chr19	907483	907642	(57709974)	C	MIRb	SINE/MIR	(93)	175	15	1797858
19	22.9	1.3	6.4	chr19	1020685	1020761	(57596855)	+	G-rich	Low_complexity	1	78	(0)	1798078
13	6.7	5.7	5.4	chr19	1174174	1174208	(57443408)	+	G-rich	Low_complexity	1	37	(0)	1798318
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
16	22.0	0.0	3.9	chr19	1605463	1605513	(57012103)	+	(GCGCGG)n	Simple_repeat	1	51	(0)	1799129
15	13.9	0.0	0.0	chr19	1605494	1605517	(57012099)	+	(G)n	Simple_repeat	1	24	(0)	1799130
194	32.2	1.1	3.2	chr19	1673955	1674047	(56943569)	+	L2c	LINE/L2	3072	3162	(225)	1799256
304	20.6	4.0	2.7	chr19	2146222	2146296	(56471320)	+	L1ME3F	LINE/L1	5958	6033	(210)	1800211
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
648	31.3	0.9	0.5	chr19	2325666	2325877	(56291739)	+	MER58A	DNA/hAT-Charlie	4	216	(8)	1800562
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
416	23.9	3.9	1.4	chr19	3244226	3245438	(55372178)	+	(TG)n	Simple_repeat	1	1260	(0)	1802728
196	31.9	8.7	5.0	chr19	3545803	3545901	(55071715)	+	L2b	LINE/L2	3284	3386	(1)	1803498
348	28.1	10.4	0.0	chr19	3545929	3546049	(55071567)	+	L2a	LINE/L2	3292	3426	(0)	1803499
2182	10.1	3.4	0.0	chr19	3876761	3877047	(54740569)	+	AluSx1	SINE/Alu	1	297	(15)	1804223
267	25.6	3.5	0.0	chr19	4173320	4173409	(54444207)	C	MIR3	SINE/MIR	(53)	155	64	1804947
28	27.4	0.0	3.9	chr19	4343803	4343905	(54273711)	+	G-rich	Low_complexity	1	103	(0)	1805404
2149	29.5	5.9	1.9	chr19	5139207	5139794	(53477822)	C	L1MB1	LINE/L1	(280)	5888	5279	1807237
1913	17.9	0.0	0.3	chr19	5345652	5345953	(53271663)	C	AluJr	SINE/Alu	(11)	301	1	1807723
326	27.6	15.9	8.4	chr19	5345954	5346103	(53271513)	C	MER113	DNA/hAT-Charlie	(241)	280	109	1807722
393	25.2	5.6	6.2	chr19	5356449	5356592	(53261024)	+	L2b	LINE/L2	3220	3362	(13)	1807750
439	31.0	10.1	3.3	chr19	5398736	5398975	(53218641)	+	L3	LINE/CR1	3834	4091	(8)	1807873
16	3.2	5.6	5.3	chr19	5404039	5404104	(53213512)	+	(AAAGA)n	Simple_repeat	1	66	(0)	1807889
22	28.0	4.7	0.0	chr19	5404105	5404120	(53213496)	+	GA-rich	Low_complexity	4	89	(0)	1807890
262	27.3	12.0	0.8	chr19	5418678	5418810	(53198806)	C	L2a	LINE/L2	(320)	3106	2957	1807933
693	28.8	21.7	2.8	chr19	5418879	5419356	(53198260)	C	L2a	LINE/L2	(786)	2633	1999	1807933
344	34.9	2.1	5.4	chr19	5978927	5979168	(52638448)	+	L2a	LINE/L2	2582	2815	(604)	1809204
1614	26.0	6.7	1.7	chr19	6564083	6564547	(52053069)	+	MLT1E2	LTR/ERVL-MaLR	138	627	(0)	1810592
2203	22.3	7.0	1.3	chr19	6588002	6588379	(52029237)	+	MER54A	LTR/ERVL	513	893	(8)	1810655
1093	24.8	6.0	4.7	chr19	6947671	6948013	(51669603)	C	LTR16A1	LTR/ERVL	(6)	450	103	1811636
185	23.8	0.0	0.0	chr19	7505845	7505886	(51111730)	C	MIRc	SINE/MIR	(142)	126	85	1813103
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
26	9.3	0.0	2.1	chr19	10010012	10010059	(48607557)	+	(ATGCACACAC)n	Simple_repeat	1	48	(0)	1818679
19	0.0	0.0	0.0	chr19	10062055	10062075	(48555541)	+	(GT)n	Simple_repeat	1	21	(0)	1818797
957	25.6	10.6	2.5	chr19	11014777	11014807	(47602809)	C	L1MC3	LINE/L1	(0)	7882	7852	1821246
329	26.0	1.3	0.0	chr19	11349302	11349378	(47268238)	+	L2a	LINE/L2	3349	3426	(0)	1822110
788	27.9	8.0	5.8	chr19	11369336	11369667	(47247949)	C	L2a	LINE/L2	(237)	3189	2820	1822144
15	17.4	2.4	2.4	chr19	11479758	11479798	(47137818)	+	G-rich	Low_complexity	1	42	(0)	1822440
712	28.3	19.4	3.9	chr19	11528494	11528683	(47088933)	+	L2a	LINE/L2	3206	3421	(5)	1822561
233	17.5	0.0	0.0	chr19	12065243	12065282	(46552334)	C	MER57E3	LTR/ERV1	(4)	483	444	1823704
13	18.3	2.6	2.5	chr19	12957099	12957137	(45660479)	+	(CCGCGG)n	Simple_repeat	1	40	(0)	1825617
443	26.7	13.6	4.0	chr19	13243918	13244237	(45373379)	+	LTR33	LTR/ERVL	26	413	(102)	1826232
2416	9.3	0.3	0.6	chr19	13415459	13415771	(45201845)	+	AluSz6	SINE/Alu	1	312	(0)	1826709
470	32.7	3.0	1.9	chr19	13415775	13415936	(45201680)	C	MIR3	SINE/MIR	(28)	180	17	1826710
607	27.7	0.0	0.0	chr19	13415970	13416110	(45201506)	+	MER3	DNA/hAT-Charlie	6	146	(63)	1826711
601	29.1	9.1	0.8	chr19	13442130	13442392	(45175224)	C	LTR16C	LTR/ERVL	(24)	465	179	1826786
2025	15.9	0.0	0.3	chr19	13462759	13463060	(45154556)	C	AluJb	SINE/Alu	(11)	301	1	1826843
2235	8.0	3.0	1.7	chr19	15016186	15016486	(43601130)	C	AluSq4	SINE/Alu	(6)	305	1	1830865
2392	9.9	0.0	0.3	chr19	15080263	15080565	(43537051)	C	AluSx1	SINE/Alu	(10)	302	1	1831057
573	25.5	5.0	2.0	chr19	15538765	15538960	(43078656)	C	L2a	LINE/L2	(0)	3426	3225	1832047
3040	20.8	5.0	6.0	chr19	15539023	15539734	(43077882)	C	L1MB8	LINE/L1	(5)	6173	5472	1832048
1838	20.0	2.7	0.0	chr19	15630985	15631339	(42986277)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1832258
19	22.8	0.0	0.0	chr19	15631879	15631919	(42985697)	+	G-rich	Low_complexity	1	41	(0)	1832260
400	24.8	6.4	0.0	chr19	15631993	15632109	(42985507)	+	ORSL-2b	DNA/hAT-Tip100	30	154	(354)	1832261
369	26.3	4.4	12.1	chr19	16051305	16051447	(42566169)	C	L2	LINE/L2	(1659)	1760	1614	1832996
2808	11.1	6.8	7.2	chr19	16051493	16051976	(42565640)	+	MER51E	LTR/ERV1	1	482	(0)	1833003
2115	7.0	1.5	0.0	chr19	16758761	16759031	(41858585)	+	AluSg	SINE/Alu	34	308	(2)	1834690
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
259	27.8	7.0	0.1	chr19	17681582	17681688	(40935928)	+	L2a	LINE/L2	3262	3426	(0)	1836996
1895	15.9	0.6	1.6	chr19	18017950	18018264	(40599352)	+	AluJr	SINE/Alu	1	312	(0)	1837861
394	18.9	0.9	7.5	chr19	18023696	18023815	(40593801)	+	MIRb	SINE/MIR	31	142	(126)	1837877
218	32.5	19.1	1.7	chr19	18239368	18239539	(40378077)	+	MIR	SINE/MIR	15	223	(45)	1838438
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
16	14.8	0.0	4.9	chr19	18636946	18636986	(39980630)	+	(CCCCG)n	Simple_repeat	1	41	(0)	1839290
13	33.5	1.6	1.6	chr19	18637038	18637100	(39980516)	+	(GCG)n	Simple_repeat	1	64	(0)	1839291
12	19.9	2.3	4.4	chr19	18919177	18919220	(39698396)	+	(CCTCCG)n	Simple_repeat	1	45	(0)	1839829
16	3.2	5.6	5.3	chr19	18919308	18919343	(39698273)	+	(CCGGAGG)n	Simple_repeat	1	38	(0)	1839830
227	35.5	4.2	3.7	chr19	19214940	19215103	(39402513)	+	MIR3	SINE/MIR	3	167	(41)	1840517
4481	14.6	6.9	3.6	chr19	28376737	28377146	(30240470)	+	L1PA16	LINE/L1	5781	6166	(0)	1848663
1015	24.9	10.6	2.2	chr19	29415315	29415626	(29201990)	+	MER2	DNA/TcMar-Tigger	3	343	(2)	1850209
257	34.4	0.6	9.9	chr19	29622517	29622697	(28994919)	+	MamRep137	DNA/TcMar-Tigger	3	166	(344)	1850502
288	29.2	6.2	1.6	chr19	29675393	29675514	(28942102)	C	MLT1K	LTR/ERVL-MaLR	(7)	588	461	1850617
181	36.1	4.0	0.8	chr19	29880655	29880774	(28736842)	+	L2a	LINE/L2	3221	3344	(82)	1851058
1554	16.4	8.2	1.8	chr19	32316274	32316548	(26301068)	+	AluJb	SINE/Alu	1	294	(18)	1854580
325	26.2	10.5	0.7	chr19	33767821	33767966	(24849650)	+	MamRep1879	DNA/hAT-Tip100?	51	212	(4)	1857283
1780	16.5	2.2	0.4	chr19	33921026	33921297	(24696319)	C	AluJb	SINE/Alu	(10)	302	26	1857553
992	25.9	12.2	3.9	chr19	34998637	34999371	(23618245)	C	L2b	LINE/L2	(115)	3260	2454	1859478
243	31.6	6.5	2.0	chr19	34999501	34999657	(23617959)	+	MIRb	SINE/MIR	8	168	(100)	1859479
38	6.5	0.0	0.0	chr19	35135680	35135727	(23481889)	+	(ATG)n	Simple_repeat	1	48	(0)	1859792
765	23.4	6.0	2.2	chr19	35135728	35135959	(23481657)	C	MIR	SINE/MIR	(8)	254	19	1859793
2237	11.2	1.7	0.0	chr19	35407418	35407712	(23209904)	C	AluSz	SINE/Alu	(11)	301	2	1860347
239	33.1	6.7	1.4	chr19	35559527	35559667	(23057949)	+	L2b	LINE/L2	3227	3375	(0)	1860654
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
390	35.1	4.6	2.1	chr19	35963486	35963674	(22653942)	C	MIRb	SINE/MIR	(29)	239	46	1861563
249	25.0	5.6	4.5	chr19	35975596	35975683	(22641933)	C	MIR	SINE/MIR	(6)	256	168	1861595
13	14.8	2.4	4.8	chr19	35995120	35995160	(22622456)	+	(GAGGCGG)n	Simple_repeat	1	42	(0)	1861643
808	28.3	15.7	0.9	chr19	36073607	36073948	(22543668)	C	L2a	LINE/L2	(4)	3422	3021	1861811
335	26.6	1.2	1.2	chr19	37919238	37919317	(20698299)	+	L2a	LINE/L2	3345	3424	(2)	1865377
899	25.2	6.0	0.4	chr19	37919317	37919551	(20698065)	C	MIR	SINE/MIR	(1)	261	13	1865378
211	27.3	0.0	0.0	chr19	37982383	37982426	(20635190)	C	L2b	LINE/L2	(26)	3400	3357	1865540
578	25.8	7.1	0.0	chr19	37982426	37982607	(20635009)	C	MIR	SINE/MIR	(0)	262	67	1865541
438	32.6	0.9	4.2	chr19	38009546	38009785	(20607831)	C	MIRb	SINE/MIR	(34)	234	3	1865612
16	11.8	5.1	2.4	chr19	38433737	38433775	(20183841)	+	(CCGC)n	Simple_repeat	1	41	(0)	1866651
949	14.5	0.7	0.7	chr19	38851618	38851769	(19765847)	+	AluJr	SINE/Alu	137	288	(24)	1867574
13	18.3	5.7	3.6	chr19	38911744	38911796	(19705820)	+	G-rich	Low_complexity	1	56	(0)	1867732
13	21.6	6.2	0.0	chr19	38911912	38911959	(19705657)	+	(CCCCAT)n	Simple_repeat	1	51	(0)	1867733
1613	19.1	5.5	1.7	chr19	39223516	39223814	(19393802)	+	AluJb	SINE/Alu	2	312	(0)	1868584
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
2100	14.3	3.1	0.8	chr19	39590551	39590958	(19026658)	+	L1PREC2	LINE/L1	4004	4422	(1724)	1869379
11621	19.4	4.2	1.6	chr19	39750931	39753158	(18864458)	+	L1M1	LINE/L1	9	2296	(5269)	1869546
596	29.4	12.9	3.2	chr19	39916795	39917079	(18700537)	+	L2a	LINE/L2	3094	3410	(16)	1869908
2040	15.3	16.5	5.5	chr19	40120904	40121062	(18496554)	C	LTR54	LTR/ERV1	(341)	169	3	1870256
17	18.4	2.3	0.0	chr19	40218254	40218296	(18399320)	+	(CGAGCC)n	Simple_repeat	1	44	(0)	1870515
2325	10.0	0.7	0.0	chr19	41289712	41290010	(17327606)	C	AluSc5	SINE/Alu	(8)	301	1	1873080
354	28.2	1.4	9.0	chr19	41306054	41306209	(17311407)	C	MamRep38	DNA/hAT	(143)	152	9	1873111
1637	22.4	5.4	1.8	chr19	41564495	41564943	(17052673)	C	LSU-rRNA_Hsa	rRNA	(965)	4070	3605	1873598
382	28.9	9.6	6.6	chr19	41706945	41707365	(16910251)	+	L2a	LINE/L2	2940	3419	(7)	1873776
2441	10.0	0.0	0.0	chr19	41813240	41813549	(16804067)	+	AluSx	SINE/Alu	3	312	(0)	1873957
14	17.7	0.0	0.0	chr19	41813550	41813581	(16804035)	+	A-rich	Low_complexity	1	32	(0)	1873958
336	20.9	8.7	3.7	chr19	42115208	42115316	(16502300)	+	L3	LINE/CR1	3824	3938	(161)	1874611
311	31.2	0.0	0.0	chr19	42115427	42115519	(16502097)	+	MER103C	DNA/hAT-Charlie	65	157	(140)	1874612
2288	13.5	0.0	0.0	chr19	42124023	42124333	(16493283)	+	AluJb	SINE/Alu	2	312	(0)	1874633
546	32.7	6.7	2.3	chr19	42143647	42144000	(16473616)	+	L2a	LINE/L2	2941	3311	(115)	1874674
16	5.2	0.0	0.0	chr19	42548665	42548684	(16068932)	+	(G)n	Simple_repeat	1	20	(0)	1875497
719	12.7	0.0	1.5	chr19	43802087	43802308	(14815308)	+	MSR1	Satellite	1	218	(0)	1877719
219	32.5	5.0	2.6	chr19	45496196	45496312	(13121304)	C	MIR3	SINE/MIR	(62)	146	27	1881466
343	28.4	8.0	9.0	chr19	45594507	45594617	(13022999)	C	MIR	SINE/MIR	(63)	199	87	1881728
2228	11.6	0.0	0.0	chr19	45594701	45594994	(13022622)	+	AluSq2	SINE/Alu	1	294	(19)	1881732
423	27.9	13.9	1.4	chr19	45646425	45646562	(12971054)	+	MIR	SINE/MIR	10	167	(95)	1881882
416	28.1	8.0	1.6	chr19	45646561	45646748	(12970868)	C	L2a	LINE/L2	(0)	3426	3226	1881883
15	5.6	0.0	0.0	chr19	46225638	46225656	(12391960)	+	(AC)n	Simple_repeat	1	19	(0)	1883152
186	27.1	0.0	13.2	chr19	46225718	46225785	(12391831)	+	L3	LINE/CR1	1685	1743	(2356)	1883153
12	9.2	0.0	4.0	chr19	46225991	46226015	(12391601)	+	(AAG)n	Simple_repeat	1	25	(0)	1883154
304	22.8	3.2	0.0	chr19	46226134	46226225	(12391391)	+	LTR67B	LTR/ERVL	37	131	(489)	1883155
1064	32.5	7.1	0.7	chr19	46466436	46466986	(12150630)	C	Charlie15b	DNA/hAT-Charlie	(24)	1037	449	1883745
899	26.9	2.0	6.8	chr19	46693026	46693336	(11924280)	+	L2b	LINE/L2	3052	3347	(28)	1884319
248	31.3	3.6	10.4	chr19	46693265	46693435	(11924181)	C	MIRb	SINE/MIR	(12)	218	65	1884320
1884	15.0	3.4	0.7	chr19	46693436	46693722	(11923894)	C	AluJr	SINE/Alu	(1)	311	17	1884321
1281	22.5	5.4	6.2	chr19	47073593	47073909	(11543707)	C	L1MB5	LINE/L1	(60)	6114	5793	1885189
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
36	28.8	5.8	0.6	chr19	47471853	47472024	(11145592)	+	GA-rich	Low_complexity	1	182	(0)	1886246
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
2350	8.0	0.3	0.7	chr19	48399286	48399585	(10218031)	+	AluSx1	SINE/Alu	3	301	(11)	1888661
477	35.5	3.1	0.4	chr19	49538724	49538975	(9078641)	C	MER20B	DNA/hAT-Charlie	(491)	292	34	1891333
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
665	26.6	9.3	5.0	chr19	49985490	49985786	(8631830)	+	L2a	LINE/L2	3111	3421	(5)	1892348
433	29.9	17.3	0.0	chr19	49985868	49986054	(8631562)	+	MIR	SINE/MIR	31	256	(6)	1892349
231	32.6	3.7	0.0	chr19	50003399	50003527	(8614089)	+	Helitron3Na_Mam	RC/Helitron	328	461	(25)	1892390
1620	22.8	5.5	3.1	chr19	50192610	50193379	(8424237)	C	L2a	LINE/L2	(1)	3425	2643	1892932
2246	10.3	0.7	0.0	chr19	50260145	50260446	(8357170)	+	AluSz	SINE/Alu	1	304	(8)	1893126
191	29.0	4.2	0.0	chr19	50260540	50260608	(8357008)	+	L2b	LINE/L2	3293	3364	(11)	1893127
12	17.3	10.0	3.9	chr19	50325680	50325749	(8291867)	+	(GGCGCGC)n	Simple_repeat	1	77	(0)	1893278
19	17.5	0.0	0.0	chr19	50344705	50344743	(8272873)	+	(CAG)n	Simple_repeat	1	39	(0)	1893306
736	24.4	2.5	3.4	chr19	50423855	50424058	(8193558)	+	MIR	SINE/MIR	48	249	(13)	1893479
16	18.4	2.2	2.2	chr19	50695452	50695496	(7922120)	+	G-rich	Low_complexity	1	46	(0)	1894112
13	19.5	2.9	0.0	chr19	50695970	50696004	(7921612)	+	(GCACA)n	Simple_repeat	1	36	(0)	1894113
1913	15.4	3.2	0.0	chr19	51318463	51318761	(7298855)	+	AluJb	SINE/Alu	1	309	(3)	1895373
558	22.2	19.6	7.4	chr19	51318916	51319105	(7298511)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1895374
2044	16.3	3.5	1.8	chr19	51477330	51477728	(7139888)	C	MER65A	LTR/ERV1	(0)	445	40	1895706
290	26.2	3.6	0.0	chr19	51480732	51480811	(7136805)	C	MLT1E1	LTR/ERVL-MaLR	(569)	85	3	1895711
303	32.6	6.7	1.6	chr19	51480840	51481023	(7136593)	+	MIRb	SINE/MIR	20	213	(55)	1895712
1234	18.6	1.3	0.9	chr19	51645029	51645261	(6972355)	+	L1MB2	LINE/L1	5937	6170	(1)	1895953
498	34.6	10.6	2.4	chr19	53896721	53897332	(4720284)	C	L2c	LINE/L2	(10)	3377	2712	1900537
26	0.0	0.0	0.0	chr19	53903304	53903328	(4714288)	+	(TGTTT)n	Simple_repeat	1	25	(0)	1900547
463	13.9	3.4	0.0	chr19	53903368	53903453	(4714163)	C	Charlie4a	DNA/hAT-Charlie	(37)	471	383	1900548
2560	8.0	0.0	0.0	chr19	53927556	53927868	(4689748)	+	AluSq2	SINE/Alu	1	313	(0)	1900586
131	4.8	2.1	2.6	chr19	54304742	54304927	(4312689)	+	(TTTC)n	Simple_repeat	1	190	(0)	1901463
171	22.0	3.4	0.2	chr19	55066362	55066775	(3550841)	+	(TC)n	Simple_repeat	1	428	(0)	1902927
17	9.3	0.0	7.5	chr19	55134009	55134048	(3483568)	+	(TCCC)n	Simple_repeat	1	40	(0)	1903066
22	23.9	3.5	0.0	chr19	55180268	55180324	(3437292)	+	(GT)n	Simple_repeat	1	59	(0)	1903171
1777	15.1	6.9	0.0	chr19	55180677	55180961	(3436655)	+	AluJo	SINE/Alu	7	312	(0)	1903172
215	38.5	1.9	1.9	chr19	55220566	55220671	(3396945)	C	L2b	LINE/L2	(5)	3370	3265	1903265
755	6.7	2.5	0.0	chr19	55224800	55225355	(3392261)	+	MSR1	Satellite	1	569	(34)	1903272
12	13.2	9.3	2.1	chr19	55580979	55581021	(3036595)	+	G-rich	Low_complexity	1	47	(0)	1904074
180	23.1	4.9	0.0	chr19	55581409	55581447	(3036169)	C	L2a	LINE/L2	(11)	3364	3324	1904075
366	26.8	11.5	15.7	chr19	55581490	55581763	(3035853)	C	L2b	LINE/L2	(11)	3364	3104	1904077
3728	25.4	11.1	7.3	chr19	56015495	56016143	(2601473)	C	L1MB7	LINE/L1	(1767)	4379	3746	1904915
199	33.3	1.1	7.9	chr19	56161924	56162001	(2455615)	+	MIRb	SINE/MIR	124	195	(73)	1905247
2245	8.7	1.7	0.3	chr19	56639022	56639310	(1978306)	C	AluSc	SINE/Alu	(14)	295	3	1906139
1501	28.8	14.2	6.6	chr19	56639311	56639761	(1977855)	+	L2a	LINE/L2	2932	3426	(0)	1906138
3231	15.0	1.7	5.2	chr19	56705429	56706098	(1911518)	+	L1MA4	LINE/L1	5651	6296	(4)	1906299
8409	4.8	0.4	0.6	chr19	56718526	56719533	(1898083)	C	LTR13	LTR/ERVK	(0)	1007	2	1906340
2958	13.7	7.3	0.2	chr19	56721414	56721897	(1895719)	+	L1MA4	LINE/L1	5782	6297	(3)	1906345
1364	28.1	7.6	4.2	chr19	57269565	57270136	(1347480)	+	MER74B	LTR/ERVL	30	622	(0)	1907531
762	26.5	7.3	0.9	chr19	57667371	57667587	(950029)	+	MIR	SINE/MIR	30	261	(1)	1908125
213	32.5	17.2	4.5	chr19	58300926	58301370	(316246)	+	L2	LINE/L2	2170	2682	(737)	1909298
2161	13.3	0.3	0.0	chr19	58317302	58317601	(300015)	+	AluSq2	SINE/Alu	1	301	(12)	1909320
230	23.6	1.8	0.0	chr19	58317645	58317699	(299917)	+	MER3	DNA/hAT-Charlie	16	71	(138)	1909321
525	27.7	0.7	0.0	chr19	58317700	58317840	(299776)	C	MER3	DNA/hAT-Charlie	(54)	155	14	1909305
330	24.9	21.2	0.3	chr2	2774925	2775101	(239418428)	C	MIRb	SINE/MIR	(0)	262	45	1913651
286	32.3	13.2	1.0	chr2	3251909	3252108	(238941421)	+	MIR	SINE/MIR	32	259	(3)	1914231
14	24.3	2.0	2.0	chr2	3575498	3575547	(238617982)	+	G-rich	Low_complexity	1	51	(0)	1914686
76	20.4	1.7	1.1	chr2	8515797	8515971	(233677558)	+	(CCT)n	Simple_repeat	1	178	(0)	1921501
258	33.3	8.1	4.7	chr2	9422726	9422939	(232770590)	C	MIRb	SINE/MIR	(13)	255	34	1922913
1161	4.6	0.0	0.0	chr2	9643308	9643438	(232550091)	C	AluY	SINE/Alu	(179)	132	2	1923346
189	33.7	2.4	4.6	chr2	10033667	10033753	(232159776)	+	L3b	LINE/CR1	4995	5079	(153)	1924047
1368	24.6	5.7	4.2	chr2	10179451	10179591	(232013938)	C	L1MD2	LINE/L1	(594)	5765	5607	1924328
319	29.3	0.0	1.2	chr2	10179602	10179684	(232013845)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	391	1924335
612	17.7	26.9	0.0	chr2	10179660	10179800	(232013729)	C	Tigger5	DNA/TcMar-Tigger	(2211)	195	3	1924336
274	29.9	7.5	9.6	chr2	10839968	10840426	(231353103)	C	L2c	LINE/L2	(3)	3384	2913	1925583
2467	20.8	2.9	1.8	chr2	10860061	10860604	(231332925)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	1925620
247	30.3	0.0	0.0	chr2	11616531	11616596	(230576933)	+	MIRc	SINE/MIR	200	265	(3)	1926977
243	28.4	4.3	1.1	chr2	11751178	11751266	(230442263)	C	L3	LINE/CR1	(3)	4096	4005	1927203
431	29.1	4.8	5.3	chr2	11809824	11810012	(230383517)	+	MIR3	SINE/MIR	14	201	(7)	1927290
248	33.3	11.8	2.5	chr2	11810097	11810505	(230383024)	C	L2c	LINE/L2	(38)	3388	2910	1927291
1147	32.3	3.1	1.1	chr2	13260301	13260748	(228932781)	+	HERV16-int	LTR/ERVL	695	1151	(3845)	1929594
1756	24.6	0.5	0.5	chr2	13561509	13561884	(228631645)	+	L1M1	LINE/L1	466	841	(6648)	1929984
720	21.9	16.5	1.5	chr2	21812585	21812882	(220380647)	+	MLT1A0	LTR/ERVL-MaLR	7	367	(14)	1942243
244	28.0	9.7	1.1	chr2	21812906	21812999	(220380530)	+	MamRep38	DNA/hAT	2	104	(191)	1942244
13	22.7	0.0	0.0	chr2	25342311	25342346	(216851183)	+	G-rich	Low_complexity	1	36	(0)	1947760
504	26.3	4.3	1.9	chr2	25342754	25342912	(216850617)	+	L3	LINE/CR1	3929	4091	(8)	1947761
326	25.3	4.4	0.0	chr2	25343635	25343721	(216849808)	+	L2c	LINE/L2	3292	3382	(5)	1947762
307	32.3	11.1	5.9	chr2	25566712	25567017	(216626512)	C	L2	LINE/L2	(2881)	538	215	1948151
976	25.8	5.0	2.6	chr2	26148437	26148746	(216044783)	+	L2a	LINE/L2	3108	3425	(1)	1949432
13	21.2	2.6	0.0	chr2	26244721	26244758	(215948771)	+	(TGGCCCC)n	Simple_repeat	1	39	(0)	1949598
372	33.9	12.5	5.8	chr2	26490938	26491644	(215701885)	C	L2	LINE/L2	(1037)	2382	1622	1950032
492	31.2	3.8	0.1	chr2	26691998	26692186	(215501343)	+	MIR3	SINE/MIR	10	198	(10)	1950403
13	22.5	0.0	0.0	chr2	26692985	26693020	(215500509)	+	(AGCGGC)n	Simple_repeat	1	36	(0)	1950405
2413	12.0	5.2	3.9	chr2	26838155	26838586	(215354943)	+	MER65A	LTR/ERV1	1	438	(7)	1950732
13	32.4	2.9	0.0	chr2	29294144	29294212	(212899317)	+	(CTTTCTC)n	Simple_repeat	1	71	(0)	1955070
600	31.1	6.3	8.3	chr2	29910904	29911281	(212282248)	+	L1MEf	LINE/L1	123	792	(5848)	1956044
13898	16.1	3.8	1.6	chr2	35523500	35528958	(206664571)	C	L1MA3	LINE/L1	(220)	7504	1856	1964907
304	31.6	13.8	4.8	chr2	37224152	37224420	(204969109)	C	L3	LINE/CR1	(288)	3811	3515	1967362
12	24.1	0.0	0.0	chr2	37666874	37666907	(204526622)	+	(TTGTT)n	Simple_repeat	1	34	(0)	1968071
277	30.6	7.5	4.5	chr2	39149543	39149690	(203043839)	+	MLT1H2	LTR/ERVL-MaLR	2	198	(351)	1970659
2233	10.9	0.0	0.3	chr2	39149691	39149983	(203043546)	C	AluSx3	SINE/Alu	(19)	292	1	1970660
682	19.4	11.8	3.6	chr2	39858743	39858935	(202334594)	C	L1ME3	LINE/L1	(2)	6160	5950	1971848
3756	17.5	9.1	1.5	chr2	39858942	39859732	(202333797)	C	MER21B	LTR/ERVL	(7)	861	5	1971849
233	31.0	11.0	5.2	chr2	41198109	41198244	(200995285)	C	MIRc	SINE/MIR	(9)	259	115	1973651
2023	16.0	2.5	0.3	chr2	41791326	41791683	(200401846)	C	MER47A	DNA/TcMar-Tigger	(0)	366	1	1974439
13	5.2	0.0	0.0	chr2	41837023	41837042	(200356487)	+	(TGG)n	Simple_repeat	1	20	(0)	1974493
487	30.4	1.9	1.2	chr2	41837187	41837346	(200356183)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1974494
891	31.5	6.6	7.8	chr2	42748406	42749470	(199444059)	C	L1MEb	LINE/L1	(5147)	1095	165	1976245
447	24.8	13.7	1.6	chr2	43657341	43657599	(198535930)	C	MLT1H2	LTR/ERVL-MaLR	(204)	351	38	1977864
232	27.5	9.0	1.5	chr2	44016224	44016356	(198177173)	+	MamRep564	Unknown	88	231	(126)	1978409
431	20.8	10.5	1.9	chr2	44077893	44078049	(198115480)	C	Chap1_Mam	DNA/hAT-Charlie	(120)	222	51	1978529
999	25.1	11.3	1.0	chr2	44792860	44793485	(197400044)	+	L1MEj	LINE/L1	804	1776	(689)	1979755
303	27.9	2.5	0.0	chr2	44793508	44793586	(197399943)	+	HAL1	LINE/L1	1821	1901	(606)	1979756
19	27.0	0.0	0.0	chr2	44793646	44793658	(197399871)	+	GA-rich	Low_complexity	1	13	(0)	1979757
1015	20.0	1.0	1.0	chr2	48445216	48445422	(193748107)	+	MER3	DNA/hAT-Charlie	1	207	(2)	1985978
20659	12.4	1.5	1.0	chr2	48836116	48841673	(193351856)	C	L1MA6	LINE/L1	(1460)	6105	499	1986606
38	16.8	4.6	0.0	chr2	51032140	51032226	(191161303)	+	GA-rich	Low_complexity	1	91	(0)	1989561
302	33.1	5.0	2.3	chr2	57549784	57549959	(184643570)	C	MamSINE1	SINE/tRNA-RTE	(24)	266	86	1998720
24	26.7	4.6	0.0	chr2	62195999	62196085	(179997444)	+	G-rich	Low_complexity	1	91	(0)	2006020
463	28.9	2.9	0.0	chr2	64296705	64296839	(177896690)	+	MIRb	SINE/MIR	19	157	(111)	2009140
510	26.1	8.0	0.5	chr2	64296992	64297176	(177896353)	C	MamRep564	Unknown	(91)	266	67	2009141
546	30.0	0.8	0.0	chr2	64363315	64363444	(177830085)	+	MER91A	DNA/hAT-Tip100	1	131	(65)	2009234
23	19.1	0.0	0.0	chr2	65129922	65129969	(177063560)	+	(GCC)n	Simple_repeat	1	48	(0)	2010632
12	28.2	1.9	1.9	chr2	70142416	70142468	(172051061)	+	(CCGC)n	Simple_repeat	1	54	(0)	2018486
589	21.7	12.2	0.0	chr2	70959675	70959854	(171233675)	C	MER3	DNA/hAT-Charlie	(2)	207	3	2019902
377	30.0	18.1	4.3	chr2	70994037	70994405	(171199124)	C	L2b	LINE/L2	(1)	3386	2956	2019948
202	38.5	6.3	2.0	chr2	71220801	71220951	(170972578)	+	L2c	LINE/L2	3144	3301	(86)	2020318
529	33.0	7.5	4.7	chr2	72846600	72846898	(169346631)	C	L2a	LINE/L2	(212)	3214	2930	2022670
482	29.4	14.0	2.5	chr2	72846877	72847131	(169346398)	C	L2a	LINE/L2	(1486)	1933	1646	2022670
12	10.0	0.0	0.0	chr2	73256714	73256735	(168936794)	+	(AATG)n	Simple_repeat	1	22	(0)	2023405
276	32.5	10.2	10.4	chr2	73279968	73280430	(168913099)	+	L2b	LINE/L2	2413	2874	(545)	2023438
30	19.8	1.9	6.5	chr2	73284383	73284487	(168909042)	+	GA-rich	Low_complexity	1	107	(0)	2023446
232	31.8	12.0	4.9	chr2	73290482	73290666	(168902863)	+	MIRb	SINE/MIR	22	221	(47)	2023455
247	15.1	0.0	10.2	chr2	73290731	73290789	(168902740)	C	L2c	LINE/L2	(0)	3387	3335	2023456
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
263	32.9	4.2	6.9	chr2	73987622	73987794	(168205735)	+	MIR3	SINE/MIR	16	183	(25)	2024583
16	13.8	0.0	8.3	chr2	74654533	74654580	(167538949)	+	(ACGCCC)n	Simple_repeat	1	48	(0)	2025741
3227	26.6	11.4	2.3	chr2	75262070	75263432	(166930097)	C	L2a	LINE/L2	(14)	3412	1904	2026712
22206	12.7	2.2	1.0	chr2	75581333	75586667	(166606862)	+	L1MA3	LINE/L1	2352	7724	(0)	2027184
17	12.3	2.7	2.6	chr2	85354466	85354502	(156839027)	+	(CAG)n	Simple_repeat	1	38	(0)	2040586
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
206	28.8	4.3	0.0	chr2	85662879	85662944	(156530585)	C	MIR3	SINE/MIR	(11)	197	129	2041245
323	29.2	11.9	3.3	chr2	86301069	86301252	(155892277)	C	Tigger19b	DNA/TcMar-Tigger	(137)	413	212	2042408
1120	24.6	9.3	1.2	chr2	94924794	94925322	(147268207)	+	L2a	LINE/L2	2646	3214	(161)	2049944
1387	21.0	2.3	3.5	chr2	94925324	94925633	(147267896)	C	AluJo	SINE/Alu	(5)	307	2	2049945
229	31.0	3.3	5.9	chr2	95043347	95043539	(147149990)	C	MIRb	SINE/MIR	(35)	233	41	2050106
228	28.3	0.0	1.6	chr2	95374125	95374185	(146819344)	C	MER91A	DNA/hAT-Tip100	(136)	60	1	2050602
588	26.8	10.8	2.1	chr2	96522771	96522964	(145670565)	C	MIRb	SINE/MIR	(32)	236	24	2052284
15	4.0	7.1	3.3	chr2	96831937	96831964	(145361565)	+	(TC)n	Simple_repeat	1	30	(0)	2052873
36	0.0	0.0	0.0	chr2	98081942	98081972	(144111557)	+	(GT)n	Simple_repeat	1	31	(0)	2054519
232	29.8	5.3	1.6	chr2	98082034	98082159	(144111370)	+	MamGypLTR1c	LTR/Gypsy	63	193	(610)	2054520
286	25.6	0.0	2.5	chr2	98082217	98082296	(144111233)	+	MLT1I	LTR/ERVL-MaLR	71	148	(263)	2054521
1801	15.1	3.2	2.9	chr2	99028316	99028662	(143164867)	C	L1MA9	LINE/L1	(7)	6305	5958	2055791
2022	21.0	3.6	12.2	chr2	99028663	99028818	(143164711)	C	L1M4b	LINE/L1	(5903)	964	822	2055790
255	26.4	10.1	1.9	chr2	100202754	100202862	(141990667)	C	L2a	LINE/L2	(43)	3383	3247	2057545
1744	6.8	0.0	0.5	chr2	100992132	100992337	(141201192)	+	AluSx	SINE/Alu	1	205	(107)	2058820
633	12.5	8.7	0.8	chr2	100992391	100992588	(141200941)	+	MSTA	LTR/ERVL-MaLR	10	241	(185)	2058821
186	21.6	2.6	0.0	chr2	101002432	101002468	(141191061)	C	L3b	LINE/CR1	(101)	5131	5094	2058833
18	18.6	0.0	5.6	chr2	101252681	101252734	(140940795)	+	(CGCCC)n	Simple_repeat	1	54	(0)	2059271
16	19.2	2.4	9.2	chr2	101387413	101387420	(140806109)	+	(GCCGGCC)n	Simple_repeat	1	28	(59)	2059502
15	25.6	3.1	3.0	chr2	101387421	101387484	(140806045)	+	(CCGG)n	Simple_repeat	1	66	(0)	2059503
1717	32.9	6.5	1.9	chr2	102434152	102435001	(139758528)	C	L3	LINE/CR1	(498)	3601	2710	2061066
201	28.9	16.1	1.9	chr2	103656738	103656896	(138536633)	C	L2c	LINE/L2	(5)	3382	3197	2062565
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
227	29.2	18.5	0.9	chr2	109183884	109183990	(133009539)	+	MIRb	SINE/MIR	23	152	(116)	2070403
410	28.7	11.9	3.0	chr2	110818933	110819169	(131374360)	+	L3	LINE/CR1	3508	3768	(331)	2072758
208	24.6	1.7	1.7	chr2	110869695	110869752	(131323777)	C	MIR	SINE/MIR	(203)	59	2	2072821
51	3.8	0.0	0.0	chr2	111120967	111121021	(131072508)	+	(CGC)n	Simple_repeat	1	55	(0)	2073128
294	30.4	5.5	0.0	chr2	114068720	114068821	(128124708)	+	MIR	SINE/MIR	136	243	(19)	2077849
29	14.1	0.0	0.0	chr2	114442629	114442691	(127750838)	+	(AGC)n	Simple_repeat	1	63	(0)	2078380
310	28.2	0.0	0.0	chr2	117833260	117833330	(124360199)	+	MIR	SINE/MIR	11	81	(181)	2082814
12	15.3	5.3	2.5	chr2	117833381	117833418	(124360111)	+	(CAGTGCT)n	Simple_repeat	1	40	(0)	2082815
309	29.3	11.7	3.9	chr2	117835028	117835208	(124358321)	+	MLT1N2	LTR/ERVL-MaLR	124	320	(242)	2082819
247	26.0	2.7	0.0	chr2	117835325	117835397	(124358132)	+	MLT1N2	LTR/ERVL-MaLR	470	544	(18)	2082819
526	32.0	5.3	0.8	chr2	118714133	118714400	(123479129)	+	MER102a	DNA/hAT-Charlie	48	328	(2)	2084137
709	26.6	9.9	6.0	chr2	119106196	119106429	(123087100)	+	MIR	SINE/MIR	4	251	(17)	2084702
682	27.4	9.6	2.2	chr2	119106566	119106796	(123086733)	C	MIRb	SINE/MIR	(15)	253	4	2084703
374	30.0	3.9	0.0	chr2	119234689	119234788	(122958741)	+	MER91C	DNA/hAT-Tip100	3	106	(34)	2084959
342	26.8	0.0	0.0	chr2	119308995	119309065	(122884464)	C	MIR	SINE/MIR	(165)	97	27	2085104
680	19.5	2.4	1.6	chr2	119309069	119309191	(122884338)	C	AluJr	SINE/Alu	(188)	124	1	2085105
746	20.1	10.4	1.6	chr2	119691171	119691362	(122502167)	+	MIR	SINE/MIR	28	238	(24)	2085771
599	23.8	5.4	3.0	chr2	125382992	125383190	(116810339)	C	MLT1F2	LTR/ERVL-MaLR	(43)	517	314	2094531
18	8.5	0.0	0.0	chr2	125383233	125383257	(116810272)	+	(A)n	Simple_repeat	1	25	(0)	2094532
651	31.1	13.5	3.5	chr2	127205115	127205538	(114987991)	C	LTR84b	LTR/ERVL	(273)	488	16	2097054
723	17.3	14.0	1.5	chr2	127701028	127701232	(114492297)	C	L1MD1	LINE/L1	(0)	6242	6008	2097839
14	0.0	7.4	3.5	chr2	128027098	128027124	(114166405)	+	(CCGC)n	Simple_repeat	1	29	(0)	2098506
14	24.6	5.1	1.6	chr2	128027166	128027224	(114166305)	+	(CGG)n	Simple_repeat	1	62	(0)	2098507
2617	17.5	9.7	2.8	chr2	128621234	128621809	(113571720)	+	MER31-int	LTR/ERV1	4297	4916	(20)	2099484
717	27.1	10.4	8.5	chr2	128950850	128951397	(113242132)	C	MLT1G	LTR/ERVL-MaLR	(7)	572	1	2099886
4824	10.6	3.4	0.8	chr2	131552234	131553018	(110640511)	C	L1PB1	LINE/L1	(712)	5439	4636	2103457
388	29.3	2.1	0.7	chr2	131584948	131585088	(110608441)	+	MLT1J1	LTR/ERVL-MaLR	25	167	(277)	2103499
11	21.6	0.0	4.9	chr2	132489403	132489443	(109704086)	+	G-rich	Low_complexity	1	41	(0)	2104663
608	34.0	8.2	0.3	chr2	133230000	133230324	(108963205)	+	MLT1I	LTR/ERVL-MaLR	59	411	(0)	2105664
638	35.1	4.9	4.4	chr2	135031070	135031860	(107161669)	C	L2c	LINE/L2	(38)	3349	2554	2108328
516	26.5	10.0	4.4	chr2	136527869	136528093	(105665436)	+	MIR	SINE/MIR	14	252	(10)	2110842
256	24.0	3.9	1.3	chr2	136582751	136582826	(105610703)	+	LTR16E1	LTR/ERVL	4	81	(457)	2110937
250	31.6	3.1	0.0	chr2	136582913	136583007	(105610522)	+	LTR16E1	LTR/ERVL	156	253	(236)	2110937
16	13.3	3.0	0.0	chr2	139142455	139142487	(103051042)	+	(TGAA)n	Simple_repeat	1	34	(0)	2114433
751	26.5	2.4	2.7	chr2	142585312	142585715	(99607814)	C	LTR41B	LTR/ERVL	(8)	760	379	2118980
668	32.1	8.1	1.9	chr2	151991864	151992177	(90201352)	C	LTR16E1	LTR/ERVL	(64)	474	140	2131660
261	23.0	1.6	4.7	chr2	151992200	151992263	(90201266)	C	LTR16E1	LTR/ERVL	(460)	78	17	2131660
233	30.7	16.7	0.0	chr2	152907108	152907247	(89286282)	+	L2c	LINE/L2	3182	3349	(38)	2133139
15	17.6	0.0	0.0	chr2	152907270	152907301	(89286228)	+	(TGT)n	Simple_repeat	1	32	(0)	2133140
742	31.1	9.1	2.9	chr2	152949983	152950333	(89243196)	C	MLT1K	LTR/ERVL-MaLR	(78)	517	143	2133192
5155	12.5	1.8	0.8	chr2	153096082	153097396	(89096133)	C	L1MA1	LINE/L1	(3215)	4350	3018	2133354
17	10.4	0.0	3.0	chr2	157876764	157876796	(84316733)	+	(GGGC)n	Simple_repeat	1	33	(0)	2139336
1526	29.6	7.6	4.1	chr2	158187879	158188515	(84005014)	C	L4_A_Mam	LINE/RTE-X	(681)	4309	3649	2139815
1710	17.4	6.6	3.1	chr2	159973365	159973714	(82219815)	+	MLT1A0	LTR/ERVL-MaLR	3	365	(0)	2142440
19	24.4	3.4	4.3	chr2	161160246	161160334	(81033195)	+	(GGCAG)n	Simple_repeat	1	92	(0)	2144048
3992	23.6	6.0	4.6	chr2	161533166	161533924	(80659605)	+	L1M3b	LINE/L1	1803	2555	(4941)	2144548
18	28.4	2.7	1.3	chr2	162318495	162318568	(79874961)	+	(GGCA)n	Simple_repeat	1	76	(0)	2145557
20	20.2	0.0	0.0	chr2	167294851	167294896	(74898633)	+	A-rich	Low_complexity	1	46	(0)	2152030
578	28.0	9.2	4.8	chr2	175230377	175230624	(66962905)	+	MLT1J1	LTR/ERVL-MaLR	69	328	(116)	2164517
1585	15.3	1.2	0.4	chr2	177127776	177128016	(65065513)	+	AluJb	SINE/Alu	1	243	(69)	2167140
11	11.7	7.3	4.5	chr2	177264340	177264380	(64929149)	+	(CCCTGC)n	Simple_repeat	1	44	(0)	2167360
303	26.5	2.5	3.3	chr2	181596768	181596888	(60596641)	+	MER5B	DNA/hAT-Charlie	4	123	(55)	2172909
406	27.2	1.9	0.0	chr2	190705614	190705716	(51487813)	C	MLT1O	LTR/ERVL-MaLR	(334)	208	104	2184749
464	31.6	9.2	3.3	chr2	191006923	191007229	(51186300)	+	L2a	LINE/L2	2438	2764	(655)	2185225
201	25.3	19.0	2.5	chr2	191007235	191007396	(51186133)	+	L2a	LINE/L2	3141	3335	(91)	2185225
1553	15.7	5.3	0.7	chr2	191152722	191153029	(51040500)	C	MER33	DNA/hAT-Charlie	(0)	324	2	2185433
15	13.9	0.0	0.0	chr2	197240059	197240082	(44953447)	+	(AT)n	Simple_repeat	1	24	(0)	2193627
2332	13.1	0.0	0.0	chr2	197240095	197240392	(44953137)	+	AluSx	SINE/Alu	3	300	(12)	2193628
227	33.3	1.2	2.3	chr2	204127405	204127490	(38066039)	+	MIRb	SINE/MIR	69	153	(115)	2205163
211	37.2	0.0	9.6	chr2	207202747	207202850	(34990679)	C	L2b	LINE/L2	(208)	3167	3074	2209675
470	35.2	7.3	0.6	chr2	207308439	207308618	(34884911)	+	MER115	DNA/hAT-Tip100	16	208	(485)	2209823
387	21.8	0.0	0.0	chr2	207308700	207308777	(34884752)	C	Arthur1B	DNA/hAT-Tip100	(1146)	79	2	2209822
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
37	21.1	3.9	0.9	chr2	216367290	216367391	(25826138)	+	(TCTC)n	Simple_repeat	1	106	(0)	2222617
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
384	27.3	3.0	0.8	chr2	217612022	217612150	(24581379)	C	L3	LINE/CR1	(100)	3999	3868	2224664
16	14.2	0.0	0.0	chr2	217902721	217902751	(24290778)	+	(GGGAG)n	Simple_repeat	1	31	(0)	2225134
19	9.2	2.7	2.6	chr2	218217198	218217234	(23976295)	+	(GCG)n	Simple_repeat	1	38	(0)	2225668
12	8.8	4.2	0.0	chr2	218961945	218961968	(23231561)	+	(GGAG)n	Simple_repeat	1	25	(0)	2227118
14	5.0	0.0	0.0	chr2	218962100	218962120	(23231409)	+	(CTGT)n	Simple_repeat	1	21	(0)	2227119
330	25.4	5.2	0.2	chr2	218991691	218991808	(23201721)	+	MIRc	SINE/MIR	73	193	(75)	2227171
13	22.1	0.0	4.3	chr2	219046174	219046219	(23147310)	+	(CCTTCCT)n	Simple_repeat	1	46	(0)	2227255
472	34.1	5.0	2.0	chr2	219046277	219046530	(23146999)	+	MIR	SINE/MIR	1	262	(0)	2227256
13	29.0	0.0	0.0	chr2	219544109	219544154	(22649375)	+	(GCCCCT)n	Simple_repeat	1	46	(0)	2228104
2455	24.2	8.2	2.5	chr2	222937354	222939329	(19254200)	C	L1MB2	LINE/L1	(3538)	3100	1070	2233470
27	13.6	0.0	0.0	chr2	223602504	223602545	(18590984)	+	(A)n	Simple_repeat	1	42	(0)	2234471
382	31.2	12.8	2.3	chr2	225937715	225937888	(16255641)	+	L2a	LINE/L2	3228	3422	(4)	2238191
15	7.8	3.7	0.0	chr2	225937892	225937918	(16255611)	+	(TGAA)n	Simple_repeat	1	28	(0)	2238194
2448	10.2	0.0	0.3	chr2	226811299	226811602	(15381927)	C	AluSz6	SINE/Alu	(9)	303	1	2239487
604	29.9	2.8	8.7	chr2	228272987	228273250	(13920279)	C	MIR	SINE/MIR	(10)	252	5	2241862
247	26.3	4.0	2.1	chr2	228273408	228273504	(13920025)	C	LTR78B	LTR/ERV1	(903)	393	295	2241863
2107	15.2	0.0	0.0	chr2	229834478	229834780	(12358749)	+	AluSx1	SINE/Alu	1	303	(9)	2244153
6282	7.7	5.0	0.2	chr2	230288527	230289436	(11904093)	C	L1PA7	LINE/L1	(14)	6140	5182	2244973
1909	12.2	1.9	0.0	chr2	230289513	230289774	(11903755)	C	AluSz	SINE/Alu	(45)	267	1	2244974
528	23.5	14.3	0.0	chr2	230861933	230862094	(11331435)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2245818
13	23.3	0.0	0.0	chr2	231379568	231379602	(10813927)	+	G-rich	Low_complexity	1	35	(0)	2246772
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
18	25.9	1.5	2.9	chr2	232876131	232876198	(9317331)	+	G-rich	Low_complexity	1	69	(0)	2249491
18	30.4	4.3	1.0	chr2	232876199	232876212	(9317317)	+	(GGCGG)n	Simple_repeat	41	98	(0)	2249490
1099	25.6	8.7	1.5	chr2	233888364	233888704	(8304825)	C	LTR16A	LTR/ERVL	(23)	428	61	2251069
732	18.8	13.8	4.4	chr2	233888740	233888967	(8304562)	+	ORSL	DNA/hAT-Tip100	23	275	(0)	2251070
823	17.9	1.8	1.8	chr2	233913044	233913208	(8280321)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	2251118
406	23.1	8.5	2.7	chr2	234110371	234110481	(8083048)	C	L2a	LINE/L2	(6)	3420	3303	2251386
505	27.9	4.2	0.0	chr2	234178937	234179072	(8014457)	+	LTR33	LTR/ERVL	355	496	(19)	2251512
20	6.9	0.0	0.0	chr2	234496974	234497004	(7696525)	+	(GCTCCC)n	Simple_repeat	1	31	(0)	2252077
38	27.5	1.7	5.0	chr2	234497099	234497275	(7696254)	+	(CCCCG)n	Simple_repeat	1	180	(0)	2252078
4950	14.7	6.2	0.1	chr2	234628711	234629482	(7564047)	+	LTR1B	LTR/ERV1	1	822	(2)	2252297
372	28.3	5.8	4.5	chr2	237548001	237548214	(4645315)	C	MIRc	SINE/MIR	(27)	241	23	2256501
479	27.9	11.2	0.0	chr2	237927220	237927409	(4266120)	+	Tigger18a	DNA/TcMar-Tigger	416	629	(223)	2257067
12	13.7	6.2	0.0	chr2	238288810	238288841	(3904688)	+	(CGCCCG)n	Simple_repeat	1	34	(0)	2257599
109	22.6	4.2	4.3	chr2	240366879	240367283	(1826246)	+	(CATGCA)n	Simple_repeat	1	422	(0)	2259977
195	21.3	19.7	1.1	chr2	240446304	240446398	(1747131)	C	L2b	LINE/L2	(25)	3350	3234	2260053
16	15.3	2.0	6.0	chr2	241356235	241356283	(837246)	+	G-rich	Low_complexity	1	50	(0)	2261023
12	24.3	1.9	3.8	chr20	381201	381252	(64062915)	+	(CCGGAGG)n	Simple_repeat	1	53	(0)	2262814
76	16.9	4.0	1.1	chr20	407889	408064	(64036103)	+	(CCGGCC)n	Simple_repeat	1	183	(0)	2262881
14	20.3	2.0	4.0	chr20	675602	675650	(63768517)	+	(GGCGCGG)n	Simple_repeat	1	50	(0)	2263484
13	29.1	0.0	3.5	chr20	675719	675776	(63768391)	+	(CGGCGG)n	Simple_repeat	1	58	(0)	2263485
207	19.7	10.1	9.0	chr20	1170969	1171046	(63273121)	C	MIR1_Amn	SINE/MIR	(151)	79	1	2264538
335	21.9	19.8	2.7	chr20	1171392	1171541	(63272626)	C	MIRc	SINE/MIR	(68)	200	19	2264539
12055	9.2	3.1	1.4	chr20	1496562	1497305	(62946862)	C	L1M1	LINE/L1	(3000)	4565	3797	2265111
182	17.0	2.1	2.1	chr20	2006063	2006110	(62438057)	C	L2b	LINE/L2	(0)	3375	3328	2266090
242	34.4	1.0	5.0	chr20	2006683	2006783	(62437384)	+	MIR3	SINE/MIR	56	152	(56)	2266093
602	29.2	8.2	3.0	chr20	3787034	3787404	(60656763)	C	L1ME4a	LINE/L1	(0)	6124	5733	2269489
593	25.0	7.7	1.5	chr20	3787749	3787852	(60656315)	C	L2	LINE/L2	(1106)	2313	2196	2269491
2326	11.9	0.0	0.6	chr20	3787853	3788164	(60656003)	+	AluSz	SINE/Alu	1	310	(2)	2269492
307	24.4	11.5	2.4	chr20	4563662	4563787	(59880380)	C	L2b	LINE/L2	(0)	3375	3237	2270936
582	29.5	14.5	1.7	chr20	4563796	4564143	(59880024)	+	LTR78	LTR/ERV1	1	400	(904)	2270937
907	14.0	0.0	2.2	chr20	5510751	5510886	(58933281)	+	FLAM_C	SINE/Alu	1	133	(10)	2272664
225	26.9	1.3	2.5	chr20	7608402	7608481	(56835686)	C	UCON1	Unknown	(1143)	243	165	2276087
976	15.9	6.4	0.0	chr20	8603552	8603727	(55840440)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	2277526
1306	31.0	3.2	3.0	chr20	9660371	9660875	(54783292)	C	L2a	LINE/L2	(2)	3424	2919	2279241
219	29.3	0.0	0.0	chr20	10133591	10133648	(54310519)	C	L2a	LINE/L2	(0)	3426	3369	2280039
374	24.8	8.5	3.0	chr20	10133681	10133813	(54310354)	C	L2a	LINE/L2	(0)	3426	3286	2280040
30	17.9	0.0	0.0	chr20	17215478	17215535	(47228632)	+	(TCC)n	Simple_repeat	1	58	(0)	2290517
29	0.0	0.0	0.0	chr20	17226798	17226825	(47217342)	+	(CGCTG)n	Simple_repeat	1	28	(0)	2290532
28	13.6	0.0	4.8	chr20	17226843	17226904	(47217263)	+	(GGCCG)n	Simple_repeat	1	62	(0)	2290533
227	31.9	12.4	0.0	chr20	17440068	17440180	(47003987)	+	MIR1_Amn	SINE/MIR	21	149	(81)	2290868
933	22.7	9.3	4.7	chr20	19008645	19008921	(45435246)	+	LTR33A	LTR/ERVL	230	520	(0)	2293546
766	28.4	10.7	7.5	chr20	22767450	22767944	(41676223)	+	MLT1G3	LTR/ERVL-MaLR	76	588	(7)	2298848
429	29.5	0.0	0.9	chr20	22805483	22805595	(41638572)	+	MER117	DNA/hAT-Charlie	58	169	(28)	2298893
12	23.8	2.2	2.1	chr20	23362245	23362290	(41081877)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2299615
2156	16.7	16.7	0.0	chr20	25054744	25055168	(39388999)	+	LTR54	LTR/ERV1	1	510	(0)	2301644
679	24.0	0.7	3.2	chr20	25055169	25055295	(39388872)	+	MLT1G	LTR/ERVL-MaLR	468	591	(0)	2301643
14	15.4	5.6	0.0	chr20	25057940	25057975	(39386192)	+	(GCT)n	Simple_repeat	1	38	(0)	2301646
332	18.9	17.2	0.0	chr20	31546964	31547074	(32897093)	C	MLT1J	LTR/ERVL-MaLR	(136)	376	243	2306236
15	11.7	0.0	0.0	chr20	31968008	31968035	(32476132)	+	(GGCGG)n	Simple_repeat	1	28	(0)	2307303
442	30.4	11.8	3.9	chr20	32608587	32608867	(31835300)	+	L2b	LINE/L2	3070	3375	(0)	2308811
478	27.8	13.9	1.2	chr20	32608884	32609127	(31835040)	C	L2a	LINE/L2	(197)	3229	2950	2308813
218	31.0	2.7	4.2	chr20	33193055	33193204	(31250963)	C	MIRc	SINE/MIR	(81)	149	1	2310145
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
878	22.1	9.4	3.0	chr20	33866117	33866522	(30577645)	C	MLT1D	LTR/ERVL-MaLR	(0)	467	22	2311785
945	23.6	7.1	8.9	chr20	33982050	33982453	(30461714)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	200	2312070
875	25.2	6.1	4.0	chr20	35227353	35227625	(29216542)	+	L3	LINE/CR1	3712	3990	(109)	2314818
1868	13.5	0.3	3.5	chr20	36057167	36057303	(28386864)	+	AluSz6	SINE/Alu	1	134	(178)	2316740
451	25.4	9.1	1.7	chr20	36344444	36344628	(28099539)	C	MIR	SINE/MIR	(54)	214	23	2317389
15	6.7	2.9	5.6	chr20	36344725	36344759	(28099408)	+	G-rich	Low_complexity	1	36	(0)	2317390
211	38.8	5.5	2.5	chr20	37431078	37431360	(27012807)	+	L2b	LINE/L2	2401	2692	(727)	2320024
706	21.0	3.7	0.7	chr20	37572804	37572982	(26871185)	C	MIR	SINE/MIR	(64)	204	19	2320294
2240	12.1	0.0	0.0	chr20	37573122	37573410	(26870757)	+	AluSx1	SINE/Alu	1	289	(23)	2320298
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
27	0.0	3.5	0.0	chr20	37901883	37901911	(26542256)	+	(GGGGCGG)n	Simple_repeat	1	30	(0)	2321013
193	37.3	4.5	2.6	chr20	37901977	37902130	(26542037)	+	MIRc	SINE/MIR	20	176	(92)	2321014
38	21.7	0.0	0.0	chr20	37902225	37902301	(26541866)	+	(CA)n	Simple_repeat	1	77	(0)	2321015
310	29.0	3.0	5.6	chr20	38685216	38685395	(25758772)	+	MER5B	DNA/hAT-Charlie	9	173	(5)	2322649
20	3.9	0.0	0.0	chr20	38685484	38685510	(25758657)	+	(CCA)n	Simple_repeat	1	27	(0)	2322650
20	20.2	8.6	3.0	chr20	38692446	38692538	(25751629)	+	(TTCC)n	Simple_repeat	1	101	(0)	2322668
13	0.0	17.6	0.0	chr20	39048140	39048173	(25395994)	+	(GTCCTGA)n	Simple_repeat	1	40	(0)	2323390
223	27.4	1.9	0.0	chr20	39196016	39196066	(25248101)	+	L3	LINE/CR1	3943	3994	(105)	2323687
291	35.8	8.8	3.5	chr20	40680612	40680782	(23763385)	+	MIR	SINE/MIR	20	201	(67)	2326244
333	27.1	20.6	0.0	chr20	41655153	41655329	(22788838)	+	MIR	SINE/MIR	26	248	(14)	2327868
211	25.0	11.6	0.0	chr20	42125576	42125651	(22318516)	+	MIRc	SINE/MIR	83	168	(100)	2328720
468	24.2	11.7	0.0	chr20	42688609	42688736	(21755431)	C	MIR	SINE/MIR	(101)	161	17	2329704
190	29.2	0.0	4.4	chr20	43040474	43040541	(21403626)	C	MIR	SINE/MIR	(1)	261	197	2330321
1395	23.2	6.1	0.6	chr20	44070828	44071170	(20372997)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	3	2332576
212	35.8	1.2	3.6	chr20	44248427	44248510	(20195657)	C	MIR3	SINE/MIR	(37)	171	90	2333008
486	26.2	8.0	1.2	chr20	44780156	44780317	(19663850)	+	MER104	DNA/TcMar-Tc2	4	177	(4)	2334322
227	22.8	5.0	0.0	chr20	44780459	44780515	(19663652)	+	MamTip2	DNA/hAT-Tip100	82	141	(164)	2334323
468	23.3	12.5	4.5	chr20	45515205	45515402	(18928765)	+	L2a	LINE/L2	3207	3422	(4)	2335815
1495	20.7	4.8	1.2	chr20	45708483	45708908	(18735259)	+	Arthur1	DNA/hAT-Tip100	3506	3947	(0)	2336079
387	28.6	4.3	0.0	chr20	45881480	45881591	(18562576)	+	MIRc	SINE/MIR	40	156	(112)	2336465
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
513	25.3	3.0	8.0	chr20	46041114	46041289	(18402878)	+	MER5B	DNA/hAT-Charlie	1	167	(11)	2336838
612	31.1	3.5	0.5	chr20	46229484	46229677	(18214490)	+	MIR	SINE/MIR	63	262	(0)	2337231
303	30.7	3.8	2.5	chr20	46230595	46230751	(18213416)	C	MIRb	SINE/MIR	(3)	265	107	2337235
339	29.6	9.0	0.0	chr20	46230733	46230864	(18213303)	+	MIR	SINE/MIR	80	224	(38)	2337236
193	30.1	6.4	0.0	chr20	46230858	46230930	(18213237)	C	MIRb	SINE/MIR	(157)	111	34	2337235
211	26.5	0.0	0.0	chr20	46262034	46262082	(18182085)	+	L2a	LINE/L2	3361	3409	(17)	2337309
1037	29.8	7.1	4.3	chr20	47016363	47016915	(17427252)	C	L2a	LINE/L2	(0)	3426	2858	2339010
422	27.4	12.6	1.6	chr20	47957186	47957489	(16486678)	C	MLT1K	LTR/ERVL-MaLR	(224)	371	30	2341185
238	26.5	5.7	2.4	chr20	48523333	48523417	(15920750)	+	UCON12	Unknown	424	511	(9)	2342279
484	23.1	16.8	4.0	chr20	48791298	48791473	(15652694)	C	MIR	SINE/MIR	(0)	262	60	2342876
18	0.0	0.0	3.9	chr20	49481181	49481206	(14962961)	+	(TCC)n	Simple_repeat	1	26	(0)	2344536
29	13.1	5.0	0.0	chr20	49483055	49483144	(14961023)	+	(CTTT)n	Simple_repeat	1	94	(0)	2344537
11	18.1	2.4	4.8	chr20	49483434	49483474	(14960693)	+	(TCCTCC)n	Simple_repeat	1	42	(0)	2344538
63	8.7	0.0	0.0	chr20	49483476	49483562	(14960605)	+	(CTC)n	Simple_repeat	1	87	(0)	2344539
402	28.9	6.1	10.5	chr20	49485680	49486004	(14958163)	+	L2b	LINE/L2	2638	2947	(472)	2344545
2112	18.8	1.0	13.6	chr20	49559013	49559507	(14884660)	+	MER41C	LTR/ERV1	85	521	(0)	2344735
3513	17.0	2.5	5.2	chr20	49559508	49559926	(14884241)	+	L1MB7	LINE/L1	5704	6123	(61)	2344733
217	26.5	11.7	0.0	chr20	49630681	49630763	(14813404)	+	MIR	SINE/MIR	8	101	(161)	2344939
322	19.1	0.0	0.0	chr20	49630805	49630867	(14813300)	+	MER20	DNA/hAT-Charlie	101	163	(56)	2344940
299	27.9	5.1	0.0	chr20	50417743	50417853	(14026314)	C	Charlie23a	DNA/hAT-Charlie	(84)	255	139	2346867
570	30.4	6.4	8.2	chr20	50417868	50418186	(14025981)	C	L2b	LINE/L2	(4)	3371	3059	2346868
642	30.3	15.1	4.2	chr20	50473196	50473766	(13970401)	C	L2b	LINE/L2	(363)	3056	2413	2347034
237	24.9	13.0	8.5	chr20	52190817	52190992	(12253175)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	2350963
404	32.8	13.4	5.2	chr20	53996614	53997300	(10446867)	+	L2c	LINE/L2	2643	3374	(13)	2354831
307	32.5	2.0	5.4	chr20	53997380	53997639	(10446528)	C	L1ME3G	LINE/L1	(327)	597	347	2354832
569	13.1	1.6	12.9	chr20	54078230	54078369	(10365798)	C	MER53	DNA/hAT	(69)	124	1	2354990
496	30.2	4.7	0.0	chr20	54078430	54078611	(10365556)	C	MLT1L	LTR/ERVL-MaLR	(10)	600	410	2354991
13	17.8	5.3	0.0	chr20	56004132	56004169	(8439998)	+	(CGCCCGG)n	Simple_repeat	1	40	(0)	2358257
360	33.1	9.8	1.6	chr20	56069292	56069478	(8374689)	C	MIRc	SINE/MIR	(4)	264	61	2358357
1298	27.3	6.0	4.8	chr20	56244005	56244527	(8199640)	C	LTR16E1	LTR/ERVL	(4)	534	5	2358659
2963	21.6	2.7	0.8	chr20	56328393	56329016	(8115151)	C	L1MB7	LINE/L1	(145)	6039	5404	2358804
280	25.3	4.8	0.0	chr20	56329045	56329123	(8115044)	C	LTR16E1	LTR/ERVL	(451)	87	5	2358807
340	31.9	4.0	8.9	chr20	56329147	56329191	(8114976)	C	L2c	LINE/L2	(253)	3134	3096	2358808
221	25.7	1.4	2.8	chr20	56391785	56391856	(8052311)	+	L2a	LINE/L2	3281	3351	(75)	2358925
17	18.6	4.4	5.6	chr20	58889254	58889321	(5554846)	+	(GGC)n	Simple_repeat	1	71	(0)	2363578
322	14.6	20.4	1.9	chr20	59062049	59062137	(5382030)	+	MIRb	SINE/MIR	107	211	(57)	2363869
183	30.9	10.0	1.2	chr20	59062152	59062233	(5381934)	C	L2a	LINE/L2	(0)	3426	3337	2363870
254	25.8	22.1	0.8	chr20	59134303	59134423	(5309744)	+	L2a	LINE/L2	3271	3424	(2)	2363978
342	29.3	1.6	1.6	chr20	59142479	59142603	(5301564)	+	MER113	DNA/hAT-Charlie	2	126	(395)	2363994
281	37.9	3.5	2.8	chr20	59765829	59765972	(4678195)	+	MIRb	SINE/MIR	92	236	(32)	2365008
228	28.9	11.0	3.0	chr20	60349385	60349584	(4094583)	+	L2a	LINE/L2	3107	3324	(102)	2365854
249	30.0	9.1	0.9	chr20	60589810	60589920	(3854247)	C	LTR89	LTR/ERVL?	(486)	393	273	2366182
241	29.6	7.5	0.0	chr20	61331809	61331925	(3112242)	+	L2a	LINE/L2	3253	3426	(0)	2367236
22	22.4	3.9	2.5	chr20	61952051	61952127	(2492040)	+	(GCACAC)n	Simple_repeat	1	80	(0)	2367934
33	24.1	5.1	3.7	chr20	62220118	62220273	(2223894)	+	(CGGAGC)n	Simple_repeat	1	164	(0)	2368302
30	12.7	2.9	9.3	chr20	62220278	62220381	(2223786)	+	(CGCCC)n	Simple_repeat	1	107	(0)	2368303
195	31.4	5.5	7.5	chr20	63070129	63070221	(1373946)	C	L3	LINE/CR1	(1763)	2336	2246	2369242
656	23.9	6.9	5.7	chr20	63082608	63082908	(1361259)	+	LTR16E1	LTR/ERVL	216	520	(18)	2369253
15	14.0	10.6	0.0	chr20	63273124	63273170	(1170997)	+	(CGC)n	Simple_repeat	1	52	(0)	2369450
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
15	21.6	2.2	2.2	chr20	64327709	64327753	(116414)	+	(GGC)n	Simple_repeat	1	46	(0)	2370734
12192	19.3	4.2	2.6	chr21	17278683	17281983	(29428000)	+	L1M1	LINE/L1	14	4409	(3156)	2381373
958	24.7	3.1	5.4	chr21	32505561	32505855	(14204128)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	87	2403334
364	30.6	8.0	1.2	chr21	32505878	32506039	(14203944)	C	MIRb	SINE/MIR	(75)	193	20	2403335
8194	15.1	14.8	1.2	chr21	32858080	32859687	(13850296)	C	MER52D	LTR/ERV1	(251)	1872	10	2403889
543	28.6	6.4	2.8	chr21	32916429	32916640	(13793343)	+	MIRb	SINE/MIR	15	234	(34)	2403992
239	28.8	9.7	3.5	chr21	32916717	32916860	(13793123)	+	MIRb	SINE/MIR	16	169	(99)	2403993
897	9.0	0.6	21.6	chr21	33013819	33014045	(13695938)	C	L1M1	LINE/L1	(3567)	2579	2401	2404163
322	30.4	3.6	4.3	chr21	35222057	35222197	(11487786)	+	L2a	LINE/L2	3287	3426	(0)	2407792
18	14.7	0.0	0.0	chr21	35222286	35222315	(11487668)	+	(CA)n	Simple_repeat	1	30	(0)	2407793
709	28.6	14.8	0.7	chr21	35490968	35491389	(11218594)	C	LTR16E1	LTR/ERVL	(46)	492	1	2408196
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
183	31.4	14.6	0.7	chr21	40300274	40300414	(6409569)	+	L2b	LINE/L2	2527	2690	(729)	2415809
751	19.3	13.4	1.1	chr21	41232052	41232234	(5477749)	C	MER3	DNA/hAT-Charlie	(0)	209	1	2417149
252	16.9	0.0	13.3	chr21	41362545	41362619	(5347364)	C	MER63D	DNA/hAT-Blackjack	(680)	381	317	2417322
1874	14.2	0.7	0.7	chr21	41362741	41363057	(5346926)	C	AluJr	SINE/Alu	(0)	312	2	2417323
480	22.5	16.3	5.1	chr21	41490357	41490534	(5219449)	C	MER3	DNA/hAT-Charlie	(5)	204	3	2417525
42	22.1	7.2	0.7	chr21	42264661	42264799	(4445184)	+	GA-rich	Low_complexity	1	149	(0)	2418665
191	22.4	4.9	10.8	chr21	42429980	42430044	(4279939)	C	OldhAT1	DNA/hAT-Ac	(1200)	1648	1588	2418867
2916	18.7	6.6	3.7	chr21	42524753	42525562	(4184421)	+	MER21C	LTR/ERVL	3	933	(5)	2419003
361	25.6	2.2	3.3	chr21	43322734	43322915	(3387068)	C	LTR16B2	LTR/ERVL	(2)	460	281	2420154
448	21.2	0.0	1.0	chr21	43322967	43323066	(3386917)	+	L2b	LINE/L2	3277	3375	(0)	2420155
59	1.9	0.0	0.0	chr21	45646054	45646108	(1063875)	+	(TC)n	Simple_repeat	1	55	(0)	2423036
35	0.0	0.0	0.0	chr21	45646109	45646146	(1063837)	+	(GT)n	Simple_repeat	1	38	(0)	2423037
4334	23.7	9.4	1.1	chr21	45884776	45886124	(823859)	C	L1MDa	LINE/L1	(4306)	2327	712	2423295
44	0.0	0.0	0.0	chr21	46228816	46228856	(481127)	+	(CCCGCCCCT)n	Simple_repeat	1	41	(0)	2423635
15	12.2	0.0	0.0	chr22	17120321	17120347	(33698121)	+	(GTG)n	Simple_repeat	1	27	(0)	2428248
15	20.1	0.0	0.0	chr22	17120597	17120630	(33697838)	+	(GCA)n	Simple_repeat	1	34	(0)	2428249
242	33.2	7.5	7.7	chr22	17152176	17152589	(33665879)	C	L2	LINE/L2	(560)	2859	2447	2428319
210	12.5	0.0	0.0	chr22	17152730	17152769	(33665699)	C	L2	LINE/L2	(1262)	2157	2118	2428319
3957	19.4	3.7	3.0	chr22	18163671	18164037	(32654431)	C	L1M3de	LINE/L1	(5106)	1547	1192	2430335
190	37.9	16.0	3.1	chr22	19201805	19202472	(31615996)	+	L2a	LINE/L2	699	1468	(1951)	2431602
198	27.1	9.1	0.0	chr22	20168041	20168110	(30650358)	C	MIR1_Amn	SINE/MIR	(85)	145	69	2432974
183	30.6	0.0	0.0	chr22	23608744	23608792	(27209676)	C	X6B_LINE	LINE/CR1	(171)	901	853	2438601
17	35.0	0.0	0.0	chr22	23692804	23692878	(27125590)	+	(CAGCGC)n	Simple_repeat	1	75	(0)	2438748
198	30.9	4.2	1.4	chr22	24140909	24140977	(26677491)	+	MIRb	SINE/MIR	19	89	(179)	2439562
16667	11.2	9.0	1.7	chr22	24744593	24745315	(26073153)	+	L1MA2	LINE/L1	3742	4503	(3062)	2440562
294	35.8	3.8	2.6	chr22	24843051	24843205	(25975263)	+	MIRb	SINE/MIR	56	212	(56)	2440779
277	32.8	3.9	5.3	chr22	24875930	24876061	(25942407)	+	MER5A	DNA/hAT-Charlie	59	188	(1)	2440869
2258	7.4	0.4	0.0	chr22	25999683	25999952	(24818516)	C	AluSx4	SINE/Alu	(39)	271	1	2443353
190	27.5	5.5	0.0	chr22	26000125	26000193	(24818275)	C	L2b	LINE/L2	(50)	3325	3253	2443354
439	26.8	10.6	0.6	chr22	26259813	26259981	(24558487)	C	MamRep564	Unknown	(107)	250	63	2443912
654	30.7	4.7	1.3	chr22	26313193	26313420	(24505048)	C	MIR	SINE/MIR	(15)	247	12	2444038
49	2.2	0.0	0.0	chr22	26313572	26313617	(24504851)	+	(AC)n	Simple_repeat	1	46	(0)	2444039
2465	14.8	5.4	0.7	chr22	26363708	26364168	(24454300)	+	L1MB2	LINE/L1	5686	6169	(2)	2444179
1403	17.9	0.4	2.9	chr22	26364326	26364571	(24453897)	+	AluJb	SINE/Alu	23	262	(50)	2444180
41	0.0	0.0	0.0	chr22	26852221	26852255	(23966213)	+	(CT)n	Simple_repeat	1	35	(0)	2445326
18	18.6	1.8	5.3	chr22	26852256	26852311	(23966157)	+	(CCT)n	Simple_repeat	1	57	(0)	2445327
753	23.1	4.4	2.5	chr22	26922798	26922997	(23895471)	C	MIR	SINE/MIR	(0)	262	59	2445484
311	31.4	2.4	0.8	chr22	26977856	26977977	(23840491)	+	MamTip2	DNA/hAT-Tip100	19	142	(163)	2445622
296	26.8	1.4	0.0	chr22	27028262	27028332	(23790136)	+	L2a	LINE/L2	3333	3404	(22)	2445739
292	28.1	2.0	3.0	chr22	27075540	27075638	(23742830)	+	MIRb	SINE/MIR	91	188	(80)	2445860
373	29.2	12.2	4.5	chr22	27454537	27454968	(23363500)	+	L2c	LINE/L2	2686	3166	(221)	2446727
235	25.0	5.3	0.0	chr22	27454996	27455067	(23363401)	+	LTR16E2	LTR/ERVL	1	76	(462)	2446728
362	35.3	0.0	0.8	chr22	29166231	29166350	(21652118)	C	L2b	LINE/L2	(1)	3374	3256	2450013
587	27.3	12.8	0.5	chr22	29476390	29476588	(21341880)	C	L2a	LINE/L2	(3)	3423	3197	2450654
235	30.6	4.4	1.8	chr22	30459585	30459694	(20358774)	C	L2c	LINE/L2	(1)	3386	3274	2452655
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
802	18.8	0.0	0.0	chr22	31638658	31638785	(19179683)	C	FLAM_A	SINE/Alu	(14)	128	1	2455247
375	25.4	3.5	2.6	chr22	32106928	32107040	(18711428)	C	MIR3	SINE/MIR	(10)	198	85	2456387
18	4.8	0.0	0.0	chr22	34415162	34415183	(16403285)	+	(GT)n	Simple_repeat	1	22	(0)	2461000
183	29.7	1.3	1.3	chr22	34852100	34852174	(15966294)	+	L2a	LINE/L2	3344	3418	(8)	2461730
291	24.2	0.0	0.0	chr22	35150431	35150496	(15667972)	+	LTR16	LTR/ERVL	301	366	(72)	2462371
676	23.4	3.1	1.9	chr22	35517766	35517922	(15300546)	+	MIRb	SINE/MIR	54	212	(56)	2463200
696	21.8	5.9	6.5	chr22	36644623	36644808	(14173660)	+	MIR	SINE/MIR	78	262	(0)	2465547
347	25.0	10.2	7.3	chr22	36753189	36753616	(14064852)	+	L2b	LINE/L2	2738	3181	(194)	2465782
201	34.5	2.5	0.8	chr22	36753552	36753668	(14064800)	+	OldhAT1	DNA/hAT-Ac	491	609	(2239)	2465783
1975	13.0	0.0	1.1	chr22	37048438	37048746	(13769722)	C	AluJo	SINE/Alu	(0)	312	2	2466395
269	35.9	1.7	0.8	chr22	37463163	37463280	(13355188)	C	MER5A	DNA/hAT-Charlie	(37)	152	34	2467293
3080	13.2	3.1	1.1	chr22	38565252	38565727	(12252741)	+	MER66B	LTR/ERV1	1	486	(0)	2469795
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
16	4.3	0.0	3.9	chr22	38824868	38824893	(11993575)	+	(CTC)n	Simple_repeat	1	26	(0)	2470347
671	28.4	5.4	2.5	chr22	38825246	38825480	(11992988)	+	MIR	SINE/MIR	2	243	(19)	2470349
2270	8.2	3.9	0.0	chr22	38917033	38917325	(11901143)	C	AluSx1	SINE/Alu	(7)	305	1	2470530
231	29.8	13.0	0.9	chr22	41382486	41382600	(9435868)	+	MER5A	DNA/hAT-Charlie	22	152	(37)	2475779
289	22.6	5.3	3.4	chr22	41414353	41414462	(9404006)	+	MIR1_Amn	SINE/MIR	40	150	(118)	2475856
187	26.8	11.8	2.4	chr22	41912134	41912217	(8906251)	+	MIR3	SINE/MIR	28	120	(88)	2477043
2613	5.0	0.0	0.0	chr22	42221740	42222037	(8596431)	C	AluYk3	SINE/Alu	(13)	298	1	2477599
280	28.5	5.3	10.9	chr22	42222038	42222091	(8596377)	+	L1MEd	LINE/L1	259	307	(6796)	2477598
439	32.1	2.1	0.0	chr22	42294645	42294784	(8523684)	C	MIRb	SINE/MIR	(37)	231	89	2477744
405	22.0	4.8	2.5	chr22	42326586	42326706	(8491762)	+	MIR3	SINE/MIR	18	141	(67)	2477806
1444	15.2	0.0	0.5	chr22	43027417	43027633	(7790835)	C	AluJb	SINE/Alu	(15)	297	82	2479407
2311	6.3	2.7	0.3	chr22	43027733	43028019	(7790449)	C	AluY	SINE/Alu	(17)	294	1	2479408
2246	12.9	0.0	0.0	chr22	43406896	43407198	(7411270)	C	AluSq2	SINE/Alu	(10)	303	1	2480180
345	30.0	10.4	5.9	chr22	43407411	43407679	(7410789)	+	MIRb	SINE/MIR	4	260	(8)	2480181
460	22.4	8.3	2.8	chr22	43449187	43449387	(7369081)	C	MIRc	SINE/MIR	(0)	268	45	2480259
200	30.5	0.0	0.0	chr22	43449362	43449420	(7369048)	+	L2b	LINE/L2	3272	3330	(45)	2480260
1333	19.0	16.4	1.6	chr22	43868171	43868614	(6949854)	C	LTR49	LTR/ERV1	(72)	523	1	2480907
281	23.1	10.3	0.0	chr22	44129837	44129914	(6688554)	+	L2a	LINE/L2	3327	3413	(13)	2481408
2214	9.5	1.7	0.3	chr22	44974132	44974426	(5844042)	+	AluJb	SINE/Alu	1	299	(13)	2482975
2024	13.7	0.0	1.4	chr22	44975885	44976177	(5842291)	+	AluJb	SINE/Alu	1	289	(23)	2482976
26	27.2	0.9	4.5	chr22	45007684	45007793	(5810675)	+	G-rich	Low_complexity	1	111	(0)	2483033
219	23.6	20.0	0.0	chr22	46154079	46154150	(4664318)	C	L2b	LINE/L2	(0)	3375	3286	2485075
195	16.3	6.5	0.0	chr22	46788606	46788648	(4029820)	+	L2a	LINE/L2	3354	3391	(35)	2486069
206	38.8	1.6	0.8	chr22	47419246	47419367	(3399101)	+	MIRb	SINE/MIR	25	147	(121)	2486818
238	32.6	2.1	2.1	chr22	48167480	48167623	(2650845)	C	Charlie19a	DNA/hAT-Charlie	(0)	386	243	2487907
1550	26.1	6.6	1.3	chr22	48171333	48171861	(2646607)	+	LTR75	LTR/ERVL	1	559	(3)	2487914
201	35.4	0.0	8.6	chr22	49915670	49915774	(902694)	+	L2a	LINE/L2	3290	3385	(41)	2489954
220	34.6	7.0	1.8	chr22	49915806	49915914	(902554)	+	L2c	LINE/L2	3273	3387	(0)	2489955
206	24.7	0.0	1.9	chr22	50271032	50271092	(547376)	+	L2b	LINE/L2	3125	3181	(194)	2490388
24	20.2	7.4	2.0	chr22	50314497	50314595	(503873)	+	(AGGCAG)n	Simple_repeat	1	104	(0)	2490428
1705	16.8	2.3	2.0	chr22	50498006	50498308	(320160)	C	AluJr	SINE/Alu	(8)	304	1	2490762
308	29.4	4.8	0.0	chr22	50498493	50498611	(319857)	C	L2b	LINE/L2	(0)	3375	3251	2490763
201	23.5	23.6	0.0	chr22	50718767	50718847	(99621)	C	MIRb	SINE/MIR	(129)	139	34	2491125
18	4.8	0.0	0.0	chr3	2811017	2811038	(195484521)	+	(A)n	Simple_repeat	1	22	(0)	2496451
670	28.5	8.0	2.9	chr3	4020955	4021299	(194274260)	C	LTR16E1	LTR/ERVL	(35)	503	88	2498333
264	34.6	0.0	0.0	chr3	4021343	4021423	(194274136)	C	LTR16E1	LTR/ERVL	(457)	81	1	2498333
4153	10.4	1.4	5.5	chr3	4158238	4158999	(194136560)	C	L1M1	LINE/L1	(3289)	4276	3547	2498579
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
399	28.3	9.6	3.7	chr3	5188609	5188795	(193106764)	C	MamRep1879	DNA/hAT-Tip100?	(0)	216	18	2500376
190	29.4	1.9	0.0	chr3	8318400	8318450	(189977109)	C	L2c	LINE/L2	(0)	3387	3336	2505156
227	28.1	5.8	4.2	chr3	8318572	8318690	(189976869)	C	MamRep434	DNA/TcMar-Tigger	(260)	166	46	2505157
2429	9.0	5.9	0.0	chr3	9106500	9106833	(189188726)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2506504
412	27.2	13.7	1.0	chr3	10594754	10594957	(187700602)	C	MIRb	SINE/MIR	(13)	255	22	2509733
1091	26.9	12.1	1.3	chr3	10866015	10866410	(187429149)	C	MLT1J	LTR/ERVL-MaLR	(36)	476	32	2510269
264	27.1	15.8	0.9	chr3	10867392	10867499	(187428060)	+	MIRb	SINE/MIR	133	259	(9)	2510270
185	35.6	3.3	0.0	chr3	10867609	10867667	(187427892)	C	L3b	LINE/CR1	(26)	5206	5146	2510271
1275	23.9	9.9	2.2	chr3	10867668	10868113	(187427446)	+	MER113	DNA/hAT-Charlie	29	512	(9)	2510272
302	20.6	4.5	0.0	chr3	10964879	10964941	(187330618)	C	MIRc	SINE/MIR	(156)	112	47	2510460
22	19.5	0.0	0.0	chr3	12049923	12049963	(186245596)	+	(T)n	Simple_repeat	1	41	(0)	2512609
1888	8.6	0.0	0.4	chr3	12049969	12050200	(186245359)	C	AluSx1	SINE/Alu	(81)	231	1	2512610
277	35.9	5.9	0.0	chr3	12879357	12879484	(185416075)	+	MER5B	DNA/hAT-Charlie	3	138	(40)	2514266
218	34.9	2.0	2.7	chr3	13142195	13142344	(185153215)	C	MIR3	SINE/MIR	(13)	195	47	2514716
17	29.9	0.0	0.0	chr3	13650691	13650747	(184644812)	+	(GCGGT)n	Simple_repeat	1	57	(0)	2515681
14	15.4	6.7	2.1	chr3	13650739	13650783	(184644776)	+	(GGCCA)n	Simple_repeat	1	48	(0)	2515682
13	8.1	3.6	3.5	chr3	14178454	14178481	(184117078)	+	(CCT)n	Simple_repeat	1	29	(0)	2516418
31	3.3	0.0	0.0	chr3	14598348	14598378	(183697181)	+	(AC)n	Simple_repeat	1	31	(0)	2517277
190	24.7	7.6	0.0	chr3	14598506	14598578	(183696981)	+	L2c	LINE/L2	3015	3093	(294)	2517278
683	22.6	5.0	0.0	chr3	15434939	15435071	(182860488)	+	FAM	SINE/Alu	1	140	(45)	2518834
11331	16.3	6.3	1.2	chr3	19668250	19670332	(178625227)	+	L1M1	LINE/L1	310	2502	(5063)	2524951
10536	11.9	2.8	0.9	chr3	23286974	23288730	(175006829)	C	L1MA3	LINE/L1	(2038)	5527	3737	2529950
204	16.7	10.4	4.8	chr3	24034656	24034718	(174260841)	C	L2a	LINE/L2	(32)	3394	3328	2531250
861	24.5	15.2	0.6	chr3	24034723	24035042	(174260517)	C	L1MEd	LINE/L1	(977)	5169	4795	2531251
41	26.1	6.0	0.6	chr3	25783483	25783650	(172511909)	+	(GGCCGG)n	Simple_repeat	1	177	(0)	2533801
277	38.0	6.8	5.2	chr3	32959061	32959482	(165336077)	C	L2c	LINE/L2	(30)	3357	2929	2545032
1294	23.9	10.7	4.3	chr3	32959579	32959864	(165335695)	+	LTR16	LTR/ERVL	16	336	(102)	2545033
26	24.9	1.2	2.4	chr3	33440394	33440477	(164855082)	+	(CGCCC)n	Simple_repeat	1	85	(0)	2545867
631	32.0	3.9	5.4	chr3	34138090	34138347	(164157212)	C	MIRb	SINE/MIR	(9)	259	6	2546981
375	32.4	12.2	1.3	chr3	34296881	34297105	(163998454)	C	L3	LINE/CR1	(60)	4039	3787	2547249
180	18.5	1.8	8.5	chr3	34420012	34420070	(163875489)	C	Tigger19b	DNA/TcMar-Tigger	(267)	283	229	2547413
1040	30.4	2.5	2.5	chr3	34876030	34876393	(163419166)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	184	2547968
387	22.0	6.2	1.1	chr3	36298352	36298443	(161997116)	+	L2a	LINE/L2	3325	3421	(5)	2549720
1076	28.1	9.7	1.8	chr3	36756041	36756486	(161539073)	C	LTR16C	LTR/ERVL	(2)	487	3	2550347
523	27.7	4.6	2.1	chr3	37620452	37620643	(160674916)	C	MIRb	SINE/MIR	(35)	233	37	2551839
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
320	32.7	7.6	5.8	chr3	38755381	38755795	(159539764)	+	L2	LINE/L2	2416	2838	(581)	2553487
355	34.9	3.3	0.0	chr3	40438124	40438269	(157857290)	+	L1M5	LINE/L1	5512	5662	(462)	2555974
2144	28.7	10.0	6.6	chr3	42299097	42299455	(155996104)	+	L1MEi	LINE/L1	1125	1482	(730)	2558858
15	21.4	1.9	3.8	chr3	42300039	42300090	(155995469)	+	(TCTGAC)n	Simple_repeat	1	53	(0)	2558861
733	26.6	8.4	2.9	chr3	42300298	42300435	(155995124)	+	LTR16E1	LTR/ERVL	243	398	(140)	2558862
3351	22.3	8.6	2.1	chr3	42959241	42960387	(155335172)	C	L1M5	LINE/L1	(2412)	3734	2507	2559934
2885	2.6	0.3	0.9	chr3	44136200	44136541	(154159018)	C	L1PA5	LINE/L1	(0)	6154	5815	2561633
1314	24.8	8.6	3.9	chr3	44136542	44136592	(154158967)	+	LTR16B1	LTR/ERVL	433	480	(0)	2561632
16	16.8	1.9	5.7	chr3	44510513	44510564	(153784995)	+	(CGCCCCG)n	Simple_repeat	1	53	(0)	2562222
1441	7.8	0.0	0.0	chr3	44532776	44532955	(153762604)	C	AluSx	SINE/Alu	(8)	304	125	2562268
197	32.9	6.8	0.0	chr3	44532990	44533071	(153762488)	+	L2b	LINE/L2	3282	3369	(6)	2562265
188	34.4	1.1	1.1	chr3	45920314	45920407	(152375152)	C	MIR3	SINE/MIR	(104)	104	11	2564655
298	23.2	6.6	0.0	chr3	46524029	46524127	(151771432)	C	HAL1ME	LINE/L1	(351)	2114	2009	2565532
19	19.1	1.7	5.0	chr3	49554469	49554527	(148741032)	+	(GCG)n	Simple_repeat	1	60	(0)	2571617
33	5.2	0.0	0.0	chr3	49554659	49554698	(148740861)	+	(CGGCCC)n	Simple_repeat	1	40	(0)	2571618
27	6.1	0.0	0.0	chr3	49554786	49554820	(148740739)	+	(GGCCCC)n	Simple_repeat	1	35	(0)	2571619
351	29.8	4.1	2.9	chr3	49618648	49618783	(148676776)	+	L2c	LINE/L2	3013	3154	(233)	2571731
1036	20.5	4.9	0.0	chr3	49690214	49690408	(148605151)	+	MER3	DNA/hAT-Charlie	3	207	(2)	2571793
17	6.3	2.7	5.3	chr3	49724202	49724238	(148571321)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	2571830
193	21.8	11.3	1.8	chr3	49868426	49868481	(148427078)	+	MIR1_Amn	SINE/MIR	109	170	(60)	2572128
443	31.0	14.8	2.3	chr3	50403669	50404011	(147891548)	+	L2b	LINE/L2	2931	3323	(52)	2572993
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
24	24.2	3.6	2.4	chr3	51706982	51707105	(146588454)	+	G-rich	Low_complexity	1	125	(0)	2574851
3688	17.9	8.0	4.8	chr3	52854077	52854951	(145440608)	+	MER21C	LTR/ERVL	19	923	(15)	2576559
26	21.9	4.7	1.1	chr3	53256022	53256107	(145039452)	+	G-rich	Low_complexity	1	90	(0)	2577297
48	2.1	0.0	0.0	chr3	54188229	54188276	(144107283)	+	(AAAC)n	Simple_repeat	1	48	(0)	2578705
15531	12.6	2.5	3.1	chr3	56494950	56495112	(141800447)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	2249	2582241
2361	7.7	0.3	1.3	chr3	56971570	56971869	(141323690)	+	AluY	SINE/Alu	1	297	(14)	2583078
349	33.0	16.8	3.0	chr3	57805099	57805992	(140489567)	+	L2c	LINE/L2	2114	3186	(189)	2584706
550	28.0	6.9	5.1	chr3	58526038	58526307	(139769252)	C	L2b	LINE/L2	(456)	2963	2689	2586174
427	25.2	2.9	0.0	chr3	58588047	58588145	(139707414)	C	MIRb	SINE/MIR	(69)	199	98	2586307
229	30.0	1.2	0.0	chr3	58748115	58748194	(139547365)	C	Tigger16a	DNA/TcMar-Tigger	(0)	957	877	2586597
727	21.9	10.7	0.5	chr3	59429409	59429592	(138865967)	C	MER3	DNA/hAT-Charlie	(0)	209	5	2587503
2197	13.4	0.0	2.2	chr3	60436037	60436349	(137859210)	C	AluSz	SINE/Alu	(6)	306	1	2589030
2949	8.2	0.2	3.5	chr3	60436350	60436399	(137859160)	C	L1PA13	LINE/L1	(379)	5784	5736	2589029
369	22.4	1.2	9.4	chr3	60436406	60436501	(137859058)	C	L2a	LINE/L2	(9)	3417	3285	2589031
356	28.1	6.1	9.5	chr3	61315818	61315986	(136979573)	C	L2c	LINE/L2	(1)	3386	3224	2590331
320	18.9	15.1	1.1	chr3	61316003	61316093	(136979466)	+	LTR16E1	LTR/ERVL	16	121	(417)	2590332
1022	28.9	2.8	2.5	chr3	61316113	61316471	(136979088)	+	LTR16E1	LTR/ERVL	178	537	(1)	2590332
307	29.9	26.1	0.8	chr3	63067814	63068167	(135227392)	C	L2a	LINE/L2	(13)	3413	2939	2593384
377	32.8	5.8	1.1	chr3	63068165	63068359	(135227200)	C	L2a	LINE/L2	(2)	3424	3194	2593385
427	30.5	19.9	4.2	chr3	63364298	63364680	(134930879)	+	L3	LINE/CR1	2707	3164	(935)	2593908
183	38.0	2.6	0.0	chr3	63364717	63364829	(134930730)	C	MER5A	DNA/hAT-Charlie	(1)	188	73	2593909
346	29.3	7.2	11.5	chr3	65673273	65673550	(132622009)	C	Charlie16a	DNA/hAT-Charlie	(71)	271	7	2597798
421	18.4	16.8	0.0	chr3	65673561	65673674	(132621885)	+	MIR3	SINE/MIR	61	197	(11)	2597799
1080	26.2	6.3	6.1	chr3	65935632	65936071	(132359488)	+	MLT1H	LTR/ERVL-MaLR	93	533	(16)	2598315
322	23.0	10.6	5.6	chr3	66165662	66165822	(132129737)	+	MamRep564	Unknown	97	266	(91)	2598838
21	13.6	4.0	1.9	chr3	66165907	66165956	(132129603)	+	(CCCCA)n	Simple_repeat	1	52	(0)	2598839
746	29.8	11.4	6.3	chr3	67704464	67704925	(130590634)	+	L2a	LINE/L2	2936	3424	(2)	2601281
329	25.9	2.7	0.9	chr3	71977523	71977631	(126317928)	+	Tigger15a	DNA/TcMar-Tigger	572	682	(33)	2608205
271	36.4	10.2	2.8	chr3	76509240	76509530	(121786029)	+	MamGypLTR3	LTR/Gypsy	214	528	(366)	2615634
325	38.8	2.6	2.1	chr3	76509548	76509739	(121785820)	+	L3	LINE/CR1	3819	4011	(88)	2615635
257	32.6	7.7	6.4	chr3	78405807	78406150	(119889409)	+	L2c	LINE/L2	2098	2446	(973)	2618105
442	34.3	2.2	1.1	chr3	81799656	81799835	(116495724)	C	MIR3	SINE/MIR	(7)	201	20	2622590
427	36.4	5.5	6.3	chr3	85630834	85631254	(112664305)	+	L2b	LINE/L2	2777	3206	(220)	2627277
1017	27.1	10.0	4.3	chr3	97979705	97980269	(100315290)	C	MER45C	DNA/hAT-Tip100	(253)	700	57	2638458
373	29.3	4.7	0.8	chr3	109973858	109973981	(88321578)	+	MamRep38	DNA/hAT	1	129	(166)	2654680
490	30.9	4.7	9.7	chr3	111351287	111351719	(86943840)	C	L2c	LINE/L2	(91)	3335	2919	2656426
16	11.7	8.3	1.9	chr3	115325850	115325897	(82969662)	+	A-rich	Low_complexity	1	52	(0)	2661947
491	29.0	14.4	5.2	chr3	115486899	115487167	(82808392)	+	L3	LINE/CR1	3787	4084	(15)	2662184
15496	14.2	2.1	0.3	chr3	117237795	117240169	(81055390)	+	L1M1	LINE/L1	10	2428	(5137)	2664611
305	25.7	3.9	7.5	chr3	120062668	120062747	(78232812)	C	L2a	LINE/L2	(44)	3382	3306	2668564
2056	12.7	0.0	0.7	chr3	120361092	120361404	(77934155)	C	AluSz6	SINE/Alu	(0)	312	1	2669039
274	33.1	6.3	0.0	chr3	122919045	122919192	(75376367)	+	L3	LINE/CR1	3801	3958	(141)	2672806
35	5.4	0.0	0.0	chr3	123105730	123105768	(75189791)	+	(CA)n	Simple_repeat	1	39	(0)	2673157
254	36.1	10.1	4.3	chr3	125102084	125102640	(73192919)	C	L2c	LINE/L2	(139)	3248	2651	2676437
423	28.1	11.9	2.6	chr3	125102685	125102951	(73192608)	+	HAL1	LINE/L1	2	296	(2211)	2676438
3040	16.4	8.9	3.6	chr3	125964145	125964784	(72330775)	+	MLT1E1A	LTR/ERVL-MaLR	1	677	(3)	2677953
436	27.9	11.4	1.6	chr3	126023330	126023639	(72271920)	C	LTR16B2	LTR/ERVL	(14)	448	119	2678028
2085	31.8	3.6	0.5	chr3	127123755	127124490	(71171069)	+	ERVL-E-int	LTR/ERVL	4516	5274	(393)	2679542
420	27.6	8.2	0.0	chr3	127158725	127158927	(71136632)	C	L2b	LINE/L2	(196)	3179	2959	2679605
266	29.0	5.2	3.3	chr3	127159045	127159194	(71136365)	+	MIR	SINE/MIR	23	175	(87)	2679606
572	28.2	4.3	0.0	chr3	127233616	127233771	(71061788)	+	L1ME1	LINE/L1	6017	6179	(0)	2679723
1668	20.8	5.1	3.0	chr3	127320214	127320650	(70974909)	+	LTR106_Mam	LTR	258	704	(4)	2679849
637	32.2	8.7	5.7	chr3	127458434	127458769	(70836790)	+	L2c	LINE/L2	3036	3382	(5)	2680072
17	24.5	1.8	1.8	chr3	127629228	127629282	(70666277)	+	(GCT)n	Simple_repeat	1	56	(0)	2680397
280	20.4	20.7	1.1	chr3	129617741	129617829	(68677730)	+	MIRb	SINE/MIR	35	145	(123)	2684088
810	28.0	15.3	1.0	chr3	129983805	129984222	(68311337)	C	LTR16C	LTR/ERVL	(0)	489	1	2684819
291	27.1	0.0	0.0	chr3	129984304	129984373	(68311186)	+	L2a	LINE/L2	3350	3419	(7)	2684812
530	25.8	10.6	2.2	chr3	134847314	134847495	(63448064)	+	MIRc	SINE/MIR	43	241	(27)	2692049
507	30.7	6.2	3.0	chr3	135105756	135105990	(63189569)	C	Chap1_Mam	DNA/hAT-Charlie	(96)	246	4	2692412
608	32.7	9.8	4.4	chr3	135172009	135172535	(63123024)	+	L3	LINE/CR1	3529	4087	(12)	2692501
304	29.1	13.0	4.7	chr3	135752909	135753212	(62542347)	C	L2c	LINE/L2	(5)	3382	2993	2693296
14	8.5	0.0	3.7	chr3	138187608	138187634	(60107925)	+	(CCCG)n	Simple_repeat	1	27	(0)	2697136
1874	10.3	0.4	0.0	chr3	138850055	138850297	(59445262)	+	AluSx	SINE/Alu	3	246	(66)	2698317
473	29.2	4.3	10.5	chr3	138850298	138850467	(59445092)	+	MLT1I	LTR/ERVL-MaLR	252	411	(0)	2698316
209	30.8	11.7	0.8	chr3	139798518	139798687	(58496872)	+	L2a	LINE/L2	3081	3258	(117)	2699898
960	23.4	5.2	4.0	chr3	140746118	140746419	(57549140)	+	MER5C	DNA/hAT-Charlie	8	313	(0)	2701270
247	26.4	5.5	12.3	chr3	140746555	140746604	(57548955)	C	MIRb	SINE/MIR	(115)	153	105	2701271
2152	12.2	9.4	1.1	chr3	140844678	140845026	(57450533)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2701409
1522	12.0	4.4	0.0	chr3	140905475	140905691	(57389868)	+	MER30	DNA/hAT-Charlie	4	230	(0)	2701482
1608	27.3	9.6	5.8	chr3	140905692	140905827	(57389732)	C	L2	LINE/L2	(1108)	2311	2156	2701480
21	14.3	0.0	9.2	chr3	150763498	150763563	(47531996)	+	(GGCGG)n	Simple_repeat	1	59	(0)	2715808
811	20.1	1.2	0.0	chr3	158098767	158098930	(40196629)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	2726358
5951	17.9	7.4	16.5	chr3	158359492	158361567	(39933992)	C	MER52D	LTR/ERV1	(243)	1880	8	2726699
1437	20.9	15.4	3.9	chr3	160133809	160134331	(38161228)	+	MER76	LTR/ERVL	1	660	(31)	2729325
1310	25.6	9.3	5.1	chr3	160170883	160171499	(38124060)	C	L2a	LINE/L2	(303)	3123	2465	2729386
15	17.9	0.0	0.0	chr3	160226116	160226147	(38069412)	+	(GGC)n	Simple_repeat	1	32	(0)	2729486
190	28.1	10.9	6.8	chr3	160830933	160831020	(37464539)	C	L2b	LINE/L2	(15)	3360	3269	2730429
538	23.0	6.8	0.0	chr3	161630855	161631006	(36664553)	C	MER5A1	DNA/hAT-Charlie	(1)	165	3	2731632
474	21.5	9.1	5.1	chr3	161631007	161631086	(36664473)	+	LTR85a	LTR/Gypsy?	616	702	(0)	2731631
7934	12.2	3.1	0.8	chr3	167610917	167612766	(30682793)	+	L1M1	LINE/L1	2962	4860	(2705)	2738919
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
12	14.9	8.1	0.0	chr3	170585591	170585627	(27709932)	+	(CGGCGC)n	Simple_repeat	1	40	(0)	2743308
266	29.6	14.6	0.7	chr3	171376445	171376580	(26918979)	C	L2b	LINE/L2	(29)	3397	3236	2744420
9343	21.7	4.5	2.0	chr3	173065434	173067183	(25228376)	+	L1MA4	LINE/L1	16	2493	(5072)	2747092
591	27.4	10.2	1.4	chr3	178444356	178444503	(19851056)	C	MIRb	SINE/MIR	(98)	170	5	2754711
200	22.6	0.0	10.2	chr3	178685173	178685231	(19610328)	+	MIRb	SINE/MIR	29	81	(187)	2755052
563	20.7	0.0	1.7	chr3	184240371	184240488	(14055071)	C	MER3	DNA/hAT-Charlie	(62)	147	32	2764282
42	21.1	4.5	4.3	chr3	184261459	184261613	(14033946)	+	(GGC)n	Simple_repeat	1	162	(0)	2764317
438	27.4	5.1	0.6	chr3	186307892	186308060	(11987499)	C	MamRep564	Unknown	(115)	242	66	2768112
843	29.5	10.5	1.2	chr3	186511838	186512390	(11783169)	C	L2a	LINE/L2	(1)	3425	2803	2768472
1478	25.3	6.0	3.8	chr3	189945959	189946513	(8349046)	C	L2a	LINE/L2	(198)	3228	2657	2774314
196	24.1	1.1	17.9	chr3	190117041	190117146	(8178413)	C	MIR1_Amn	SINE/MIR	(129)	101	14	2774603
7956	21.4	5.4	1.8	chr3	191641475	191645342	(6650217)	+	L1PA15	LINE/L1	835	5103	(3038)	2776840
241	27.3	2.5	3.8	chr3	192187657	192187736	(6107823)	C	L2b	LINE/L2	(216)	3159	3081	2777523
36	22.9	4.4	4.2	chr3	192187741	192187878	(6107681)	+	A-rich	Low_complexity	1	138	(0)	2777524
17	0.0	0.0	0.0	chr3	192727463	192727481	(5568078)	+	(T)n	Simple_repeat	1	19	(0)	2778369
17	13.1	0.0	8.2	chr3	192727616	192727664	(5567895)	+	(CCCCCT)n	Simple_repeat	1	49	(0)	2778370
15	17.5	0.0	0.0	chr3	192917954	192917985	(5377574)	+	G-rich	Low_complexity	1	32	(0)	2778681
12	12.6	0.0	3.6	chr3	192918099	192918126	(5377433)	+	(CTGCC)n	Simple_repeat	1	28	(0)	2778682
593	31.5	3.6	0.5	chr3	194994551	194994764	(3300795)	+	MIRb	SINE/MIR	7	227	(41)	2782201
19269	15.7	4.8	5.6	chr3	195359767	195360513	(2935046)	+	L1M1	LINE/L1	3270	4041	(3521)	2782758
2307	11.5	0.6	1.3	chr3	195360514	195360827	(2934732)	+	AluSx	SINE/Alu	1	312	(0)	2782761
336	27.9	5.1	0.0	chr3	196179418	196179528	(2116031)	+	MIRc	SINE/MIR	140	256	(12)	2784435
641	27.9	7.1	2.5	chr3	196179541	196179783	(2115776)	+	Tigger10	DNA/TcMar-Tigger	1569	1823	(21)	2784436
262	13.8	5.8	0.0	chr3	196184690	196184754	(2110805)	C	MER113A	DNA/hAT-Charlie	(172)	142	74	2784452
331	32.0	11.7	2.9	chr3	196202690	196202979	(2092580)	C	L2	LINE/L2	(1342)	2077	1752	2784494
2177	9.5	5.5	0.3	chr3	196202980	196203274	(2092285)	+	AluSx	SINE/Alu	2	312	(0)	2784495
248	27.9	8.3	3.5	chr3	196633594	196633708	(1661851)	C	L2b	LINE/L2	(22)	3353	3233	2785443
16	0.0	0.0	0.0	chr3	197555249	197555268	(740291)	+	(GGA)n	Simple_repeat	1	20	(0)	2787121
13	18.4	5.3	0.0	chr4	825597	825634	(189388921)	+	GA-rich	Low_complexity	1	40	(0)	2789580
143	18.4	0.7	1.9	chr4	826205	826509	(189388046)	+	G-rich	Low_complexity	1	307	(0)	2789581
1878	23.6	12.0	0.2	chr4	1132848	1133492	(189081063)	C	L1ME3A	LINE/L1	(128)	6747	6016	2789917
1208	14.7	4.5	0.8	chr4	1869842	1870075	(188344480)	C	L1MC	LINE/L1	(1173)	4973	4731	2790723
216	17.9	0.0	0.0	chr4	2813302	2813340	(187401215)	+	MIR	SINE/MIR	67	105	(157)	2792267
553	23.1	6.7	2.5	chr4	3635388	3635608	(186578947)	C	MER21B	LTR/ERVL	(6)	932	617	2793410
320	19.5	3.8	0.0	chr4	3635606	3635682	(186578873)	C	MER21C	LTR/ERVL	(172)	696	617	2793411
193	27.4	5.8	3.4	chr4	3791967	3792083	(186422472)	C	L2	LINE/L2	(870)	2549	2430	2793620
1617	17.5	5.1	2.5	chr4	3868047	3868444	(186346111)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	24	2793740
357	36.0	4.7	3.6	chr4	5220259	5220532	(184994023)	C	L2b	LINE/L2	(35)	3340	3064	2796227
257	34.2	3.4	0.9	chr4	5451359	5451473	(184763082)	C	L2	LINE/L2	(477)	2942	2825	2796591
393	30.3	11.6	5.7	chr4	5451471	5451613	(184762942)	+	MIR	SINE/MIR	6	164	(98)	2796592
12	9.2	14.6	1.8	chr4	5630970	5631017	(184583538)	+	(GCATGT)n	Simple_repeat	1	55	(0)	2796862
911	30.8	9.0	5.4	chr4	5792645	5793533	(184421022)	+	L1MEd	LINE/L1	4205	5128	(1018)	2797173
213	31.8	0.9	8.6	chr4	5875552	5875668	(184338887)	C	L2c	LINE/L2	(246)	3141	3034	2797342
12	22.9	2.3	2.3	chr4	5890679	5890721	(184323834)	+	GA-rich	Low_complexity	1	44	(0)	2797366
208	32.2	0.0	0.0	chr4	5890882	5890967	(184323588)	C	MIR1_Amn	SINE/MIR	(83)	185	100	2797367
52	2.1	0.0	0.0	chr4	5891165	5891213	(184323342)	+	(CA)n	Simple_repeat	1	49	(0)	2797368
50	4.0	0.0	0.0	chr4	5928348	5928399	(184286156)	+	(AC)n	Simple_repeat	1	52	(0)	2797435
1502	16.9	0.0	2.3	chr4	5932477	5932737	(184281818)	C	AluJr	SINE/Alu	(53)	259	5	2797440
181	22.7	12.0	1.1	chr4	6199092	6199180	(184015375)	C	L2b	LINE/L2	(274)	3101	3002	2797926
205	8.8	0.0	2.9	chr4	6225647	6225681	(183988874)	C	L2b	LINE/L2	(18)	3357	3324	2797987
830	27.6	0.4	6.9	chr4	6362797	6363041	(183851514)	+	MIR	SINE/MIR	2	230	(32)	2798226
463	24.9	4.2	8.1	chr4	6363199	6363296	(183851259)	C	MER63A	DNA/hAT-Blackjack	(0)	210	119	2798227
575	28.7	9.0	0.9	chr4	6370143	6370367	(183844188)	+	MIRc	SINE/MIR	2	246	(22)	2798246
263	28.0	7.4	0.0	chr4	6370420	6370519	(183844036)	+	MLT1K	LTR/ERVL-MaLR	78	185	(410)	2798247
234	30.9	10.5	7.7	chr4	6546077	6546297	(183668258)	C	MIRb	SINE/MIR	(1)	267	40	2798573
14	4.5	0.0	4.0	chr4	6987238	6987262	(183227293)	+	(CCGC)n	Simple_repeat	1	25	(0)	2799430
16	24.4	3.5	5.6	chr4	7042373	7042458	(183172097)	+	(CCTCTC)n	Simple_repeat	1	89	(0)	2799507
539	29.4	14.6	1.4	chr4	8002825	8003120	(182211435)	+	L2a	LINE/L2	3067	3408	(18)	2801075
1588	23.8	3.3	5.4	chr4	8003126	8003498	(182211057)	C	MER47A	DNA/TcMar-Tigger	(1)	365	1	2801076
224	30.9	5.2	8.1	chr4	8159160	8159378	(182055177)	C	MIR3	SINE/MIR	(5)	225	7	2801329
437	26.4	8.8	1.9	chr4	8160552	8160709	(182053846)	C	MIR3	SINE/MIR	(27)	181	12	2801331
276	32.8	5.9	1.5	chr4	8160745	8160874	(182053681)	+	MIRb	SINE/MIR	42	177	(91)	2801332
464	32.1	12.8	0.3	chr4	8671516	8671843	(181542712)	C	L2c	LINE/L2	(623)	2796	2422	2802113
2347	14.6	0.3	0.6	chr4	12645462	12645826	(177568729)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2808020
520	33.7	6.5	2.8	chr4	12645939	12646188	(177568367)	C	MIR	SINE/MIR	(1)	261	2	2808021
1189	17.6	5.0	5.0	chr4	17322405	17322726	(172891829)	C	MER33	DNA/hAT-Charlie	(1)	323	2	2815969
511	29.3	10.3	3.7	chr4	17322751	17322847	(172891708)	C	MIRb	SINE/MIR	(14)	254	156	2815970
297	24.7	6.4	0.0	chr4	21476936	21477008	(168737547)	C	L2a	LINE/L2	(34)	3392	3315	2822546
33	0.0	2.9	0.0	chr4	25160484	25160518	(165054037)	+	(AAAAC)n	Simple_repeat	1	36	(0)	2828388
540	30.8	13.3	0.8	chr4	25838543	25838797	(164375758)	C	MamRep38	DNA/hAT	(3)	292	1	2829861
31	28.6	1.8	0.9	chr4	26319397	26319507	(163895048)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	2830848
582	14.9	6.3	3.9	chr4	27112571	27112724	(163101831)	C	MER96B	DNA/hAT-Tip100	(20)	397	240	2832101
2156	12.9	6.6	0.8	chr4	27112879	27113237	(163101318)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2832102
20465	11.3	3.3	3.8	chr4	32847452	32848085	(157366470)	C	L1M1	LINE/L1	(3368)	4197	3566	2839980
6843	20.5	1.5	1.4	chr4	36426877	36428423	(153786132)	+	L1PA14	LINE/L1	10	1286	(5403)	2844749
256	39.9	5.2	4.9	chr4	37268246	37268551	(152946004)	+	L2b	LINE/L2	3052	3358	(17)	2845909
23476	11.7	0.9	1.4	chr4	40383258	40383878	(149830677)	+	L1M1	LINE/L1	3410	4027	(3538)	2851888
2411	8.7	0.3	0.0	chr4	40383879	40384177	(149830378)	+	AluSc8	SINE/Alu	1	300	(11)	2851892
18305	16.3	2.0	0.7	chr4	44196465	44202802	(146011753)	+	L1PA16	LINE/L1	1	6693	(0)	2857952
380	31.8	6.9	6.2	chr4	44350961	44351285	(145863270)	+	L2a	LINE/L2	3061	3387	(0)	2858159
927	27.9	12.0	6.7	chr4	47926660	47927374	(142287181)	+	LTR41B	LTR/ERVL	1	758	(0)	2862978
15	22.3	0.0	6.8	chr4	51844404	51844462	(138370093)	+	(GCGCGG)n	Simple_repeat	1	59	(0)	2865386
1087	17.9	3.4	5.6	chr4	52709166	52709333	(137505222)	C	MER3	DNA/hAT-Charlie	(35)	174	1	2866609
187	25.0	5.3	1.4	chr4	52709345	52709417	(137505138)	C	L2c	LINE/L2	(380)	3007	2932	2866607
578	29.4	5.2	6.4	chr4	53649265	53649497	(136565058)	C	MIR	SINE/MIR	(15)	247	18	2868007
447	31.6	12.4	5.6	chr4	53649499	53649941	(136564614)	+	L2c	LINE/L2	2911	3387	(0)	2868008
620	28.8	2.4	0.0	chr4	56123600	56123759	(134090796)	C	MIR	SINE/MIR	(98)	164	1	2872066
15	13.7	0.0	5.6	chr4	56908351	56908386	(133306169)	+	(CGG)n	Simple_repeat	1	36	(0)	2873605
14	18.2	2.1	4.2	chr4	63869446	63869492	(126345063)	+	(ATTTAAT)n	Simple_repeat	1	48	(0)	2882517
1625	25.3	2.6	5.0	chr4	63869601	63870037	(126344518)	C	MLT1C	LTR/ERVL-MaLR	(29)	438	13	2882518
6999	19.9	3.9	1.0	chr4	71813588	71814923	(118399632)	C	MER52A	LTR/ERV1	(1)	1754	379	2892691
23	13.5	0.0	0.0	chr4	74878389	74878429	(115336126)	+	(AAAAAC)n	Simple_repeat	1	41	(0)	2896805
275	33.3	2.4	8.6	chr4	74878491	74878759	(115335796)	+	L2	LINE/L2	2378	2629	(790)	2896806
2309	8.6	0.7	0.0	chr4	75719598	75719888	(114494667)	C	AluSp	SINE/Alu	(20)	293	1	2897939
834	13.4	12.5	1.4	chr4	75720023	75720164	(114494391)	C	AluSz6	SINE/Alu	(18)	294	135	2897940
572	26.4	11.3	3.1	chr4	75930312	75930538	(114284017)	+	MIRc	SINE/MIR	4	251	(17)	2898418
3733	20.1	2.5	5.2	chr4	79140277	79141802	(111072753)	C	L1P4a	LINE/L1	(4421)	2364	955	2903223
614	25.8	0.0	13.8	chr4	79141799	79142023	(111072532)	C	L1P4a	LINE/L1	(6059)	727	534	2903223
188	30.2	1.6	1.6	chr4	80846247	80846310	(109368245)	C	L2c	LINE/L2	(259)	3128	3065	2905312
475	24.8	8.1	0.0	chr4	80846331	80846455	(109368100)	+	L2b	LINE/L2	3287	3422	(4)	2905311
635	34.1	3.5	1.8	chr4	80897412	80897689	(109316866)	C	LTR67B	LTR/ERVL	(0)	620	338	2905380
2027	16.1	1.0	0.7	chr4	82017997	82018300	(108196255)	C	AluJb	SINE/Alu	(7)	305	1	2906978
2484	14.7	7.4	0.7	chr4	82522597	82523048	(107691507)	C	MER31A	LTR/ERV1	(0)	485	1	2907755
396	33.2	7.3	3.5	chr4	85647431	85647627	(104566928)	+	MIRb	SINE/MIR	6	210	(58)	2912794
886	27.6	6.1	1.0	chr4	85647742	85648034	(104566521)	+	L2a	LINE/L2	3118	3426	(0)	2912795
1303	26.3	9.0	2.4	chr4	86319525	86319988	(103894567)	+	LTR16E1	LTR/ERVL	16	513	(25)	2913643
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
198	37.0	10.3	3.3	chr4	87093831	87094073	(103120482)	+	L2c	LINE/L2	2670	2931	(488)	2914909
284	28.2	6.2	13.0	chr4	95590754	95590961	(94623594)	C	L2b	LINE/L2	(0)	3387	3195	2926598
1052	30.1	6.9	1.7	chr4	95889570	95889981	(94324574)	+	MLT1F	LTR/ERVL-MaLR	27	461	(87)	2926946
638	31.1	4.7	1.6	chr4	101332648	101332895	(88881660)	C	MIRb	SINE/MIR	(10)	258	3	2934229
265	25.0	9.3	1.1	chr4	102137264	102137352	(88077203)	+	L2a	LINE/L2	3317	3413	(13)	2935246
461	35.4	5.2	0.6	chr4	102137400	102137581	(88076974)	+	MIRb	SINE/MIR	67	257	(11)	2935255
1257	34.7	9.5	3.8	chr4	102686465	102687875	(87526680)	+	L2b	LINE/L2	1869	3371	(4)	2936011
409	34.3	15.8	6.0	chr4	103002701	103003516	(87211039)	+	L2c	LINE/L2	292	1202	(2217)	2936466
182	25.0	11.1	2.4	chr4	108861457	108861538	(81353017)	+	MamRTE1	LINE/RTE-BovB	265	354	(3458)	2944179
1345	16.8	1.7	3.0	chr4	109809696	109810069	(80404486)	+	MER47B	DNA/TcMar-Tigger	4	418	(0)	2945561
771	30.8	3.1	0.8	chr4	111945214	111945465	(78269090)	+	MIR	SINE/MIR	2	259	(3)	2948448
3463	29.0	9.5	2.9	chr4	113789835	113790441	(76424114)	+	L2a	LINE/L2	2513	3169	(257)	2951293
1021	25.0	5.7	1.7	chr4	115711511	115711799	(74502756)	C	LTR41B	LTR/ERVL	(0)	758	458	2953605
238	31.6	0.0	2.6	chr4	118669435	118669512	(71545043)	+	MamRep605	LTR?	108	183	(666)	2957330
20340	13.8	3.4	1.1	chr4	122142257	122146724	(68067831)	C	L1PA16	LINE/L1	(2967)	4598	14	2962134
590	31.3	8.7	0.0	chr4	123474994	123475204	(66739351)	C	MIRb	SINE/MIR	(26)	242	12	2964037
510	32.5	4.7	1.9	chr4	128333395	128333447	(61881108)	+	MLT1M	LTR/ERVL-MaLR	228	277	(395)	2970589
406	31.1	11.6	0.9	chr4	128333554	128333961	(61880594)	C	L2a	LINE/L2	(146)	3280	2818	2970591
458	32.9	16.2	3.3	chr4	129264018	129264533	(60950022)	+	L2b	LINE/L2	2669	3282	(93)	2971955
6681	22.4	3.2	1.9	chr4	141702187	141703696	(48510859)	C	L1PBa	LINE/L1	(5219)	1644	114	2988030
657	19.5	15.9	0.6	chr4	147779039	147779198	(42435357)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2996228
1652	17.1	4.8	0.7	chr4	148206929	148207209	(42007346)	C	AluJr	SINE/Alu	(19)	293	1	2996823
308	28.2	14.2	7.2	chr4	148207210	148207341	(42007214)	C	MIRb	SINE/MIR	(83)	185	29	2996822
406	28.6	7.2	3.5	chr4	151930469	151930696	(38283859)	+	LTR79	LTR/ERVL	105	341	(186)	3002183
338	18.8	0.0	1.4	chr4	151930713	151930782	(38283773)	+	LTR79	LTR/ERVL	403	471	(56)	3002183
2045	16.2	0.0	0.9	chr4	152547771	152548085	(37666470)	+	AluJb	SINE/Alu	1	312	(0)	3003162
1640	22.8	3.8	8.5	chr4	152548086	152548430	(37666125)	C	L1MC4	LINE/L1	(1256)	6786	6459	3003158
463	25.0	4.4	0.0	chr4	154485542	154485649	(35728906)	+	L2a	LINE/L2	3311	3423	(3)	3006108
349	34.6	3.2	8.3	chr4	156771367	156771631	(33442924)	+	UCON8	DNA	5	255	(860)	3009230
1443	30.6	14.1	3.5	chr4	158763500	158763678	(31450877)	C	L2c	LINE/L2	(1213)	2206	1997	3011871
283	31.3	6.3	2.9	chr4	164396464	164396601	(25817954)	+	MER117	DNA/hAT-Charlie	12	154	(43)	3019362
390	26.8	22.6	1.7	chr4	165206730	165207078	(25007477)	+	L2a	LINE/L2	2981	3423	(3)	3020736
14	23.1	2.1	2.0	chr4	169824035	169824082	(20390473)	+	(CCTGG)n	Simple_repeat	1	49	(0)	3026899
5301	22.6	3.5	5.8	chr4	174474520	174476884	(15737671)	+	L1PB3	LINE/L1	660	2263	(4600)	3033014
791	26.9	2.5	4.3	chr4	179096098	179096419	(11118136)	C	L1MCc	LINE/L1	(4900)	1523	1208	3039058
1537	29.5	5.6	2.2	chr4	179097245	179097881	(11116674)	+	L1MCc	LINE/L1	874	1533	(4890)	3039059
766	30.6	8.2	4.3	chr4	180234817	180235215	(9979340)	+	LTR52	LTR/ERVL	1	416	(5)	3040491
822	25.6	12.6	5.9	chr4	181950418	181950628	(8263927)	+	L2a	LINE/L2	3190	3407	(19)	3042758
1918	16.6	0.0	0.7	chr4	184352667	184352974	(5861581)	+	AluJr	SINE/Alu	1	306	(6)	3046419
2028	14.5	8.9	1.0	chr4	184942900	184943290	(5271265)	C	MSTB	LTR/ERVL-MaLR	(1)	425	1	3047418
13	22.7	4.3	0.0	chr4	185396634	185396679	(4817876)	+	(GGCCCCC)n	Simple_repeat	1	48	(0)	3048207
1142	29.7	3.8	5.1	chr4	186058143	186058687	(4155868)	+	HERVL74-int	LTR/ERVL	5037	5670	(15)	3049133
2247	20.3	0.9	0.2	chr4	186058696	186059149	(4155406)	+	MER74C	LTR/ERVL	2	458	(2)	3049133
324	38.6	0.8	0.0	chr5	57013	57139	(181481120)	+	L2b	LINE/L2	3247	3374	(1)	3055020
60	1.8	0.0	0.0	chr5	443221	443278	(181094981)	+	(GGC)n	Simple_repeat	1	58	(0)	3055430
438	30.7	14.8	0.9	chr5	5071234	5071699	(176466560)	+	LTR16D2	LTR/ERVL	25	566	(6)	3060120
334	31.4	7.5	0.0	chr5	6328399	6328522	(175209737)	+	LTR16E1	LTR/ERVL	167	300	(238)	3061686
751	26.6	9.7	4.9	chr5	6591912	6592235	(174946024)	+	LTR16	LTR/ERVL	94	434	(4)	3062074
496	30.7	11.4	5.3	chr5	7010734	7011201	(174527058)	C	L2a	LINE/L2	(0)	3426	2927	3062596
999	28.6	8.9	0.0	chr5	7529690	7530046	(174008213)	+	LTR16A	LTR/ERVL	60	451	(0)	3063279
230	30.2	8.2	6.1	chr5	7530047	7530221	(174008038)	+	MIR	SINE/MIR	81	258	(10)	3063278
410	33.3	11.9	1.9	chr5	9244177	9244523	(172293736)	+	L2a	LINE/L2	2769	3153	(273)	3065272
410	28.8	3.5	11.5	chr5	9244537	9244693	(172293566)	+	L2a	LINE/L2	3243	3425	(1)	3065272
201	29.0	3.1	0.0	chr5	10251082	10251143	(171287116)	C	L2	LINE/L2	(345)	3074	3011	3066555
11	7.5	6.7	3.1	chr5	13554006	13554035	(167984224)	+	(GCCACA)n	Simple_repeat	1	32	(0)	3070965
16	18.1	4.5	0.0	chr5	13554061	13554104	(167984155)	+	(CAGCGC)n	Simple_repeat	1	46	(0)	3070966
447	33.9	9.6	5.5	chr5	13648776	13649065	(167889194)	+	L2c	LINE/L2	3080	3382	(5)	3071100
14	5.0	0.0	0.0	chr5	13649074	13649094	(167889165)	+	(ATGA)n	Simple_repeat	1	21	(0)	3071101
360	28.9	1.2	0.0	chr5	13866937	13867019	(167671240)	+	L2b	LINE/L2	3252	3335	(40)	3071391
23	20.4	4.3	1.4	chr5	16179074	16179142	(165359117)	+	(GCT)n	Simple_repeat	1	72	(0)	3074628
3954	15.4	3.3	4.1	chr5	29963505	29964477	(151573782)	+	L1M1	LINE/L1	3342	4316	(3249)	3093067
116	3.3	0.0	1.6	chr5	30216808	30216935	(151321324)	+	(TCTT)n	Simple_repeat	1	128	(0)	3093377
674	5.3	0.0	2.1	chr5	30217025	30217121	(151321138)	C	L1PA8	LINE/L1	(0)	6172	6078	3093378
450	23.0	13.0	0.8	chr5	32231830	32232023	(149306236)	C	MIR	SINE/MIR	(23)	245	19	3096452
193	34.1	1.2	0.0	chr5	34552976	34553057	(146985202)	C	L2c	LINE/L2	(0)	3387	3305	3099982
3333	23.1	11.1	7.7	chr5	37489954	37491354	(144046905)	C	L1M2	LINE/L1	(5701)	1508	1	3104638
7372	8.6	1.0	0.2	chr5	37671897	37672890	(143865369)	+	LTR5B	LTR/ERVK	1	1002	(0)	3104901
596	27.6	13.6	2.9	chr5	38210799	38211209	(143327050)	+	L2a	LINE/L2	2934	3395	(31)	3105749
386	24.6	11.3	0.0	chr5	38211242	38211359	(143326900)	C	MIR	SINE/MIR	(24)	238	106	3105750
555	25.1	5.1	6.0	chr5	38921139	38921354	(142616905)	C	MER58C	DNA/hAT-Charlie	(1)	214	1	3106851
365	32.2	8.6	3.2	chr5	54855134	54855287	(126682972)	+	LTR88c	LTR/Gypsy?	46	208	(654)	3122362
240	23.9	8.2	0.0	chr5	54855312	54855378	(126682881)	C	L2b	LINE/L2	(0)	3375	3303	3122363
711	28.1	14.8	8.4	chr5	55865621	55866299	(125671960)	C	LTR81A	LTR/Gypsy	(5)	1345	597	3124011
2176	12.8	0.0	1.0	chr5	57386740	57387037	(124151222)	+	AluSx	SINE/Alu	1	295	(17)	3126705
416	32.8	9.0	4.9	chr5	57387038	57387131	(124151128)	C	MER102b	DNA/hAT-Charlie	(240)	101	4	3126704
341	26.9	10.2	2.1	chr5	58641494	58641637	(122896622)	+	LTR79	LTR/ERVL	1	157	(370)	3128379
272	23.9	18.5	1.8	chr5	58641653	58641818	(122896441)	+	LTR79	LTR/ERVL	204	403	(124)	3128379
14	11.6	3.5	0.0	chr5	59127406	59127434	(122410825)	+	(TTTC)n	Simple_repeat	1	30	(0)	3129092
11	24.9	0.0	0.0	chr5	59893997	59894030	(121644229)	+	(GCAGCA)n	Simple_repeat	1	34	(0)	3130141
35	6.9	0.0	0.0	chr5	61332327	61332372	(120205887)	+	(GGC)n	Simple_repeat	1	46	(0)	3132106
24	4.9	4.3	4.2	chr5	61332413	61332458	(120205801)	+	(GGC)n	Simple_repeat	1	48	(0)	3132106
291	31.7	1.2	0.0	chr5	66796831	66796912	(114741347)	+	L2a	LINE/L2	3339	3421	(5)	3139958
598	32.2	4.7	5.0	chr5	68518286	68518628	(113019631)	C	LTR81B	LTR/Gypsy	(554)	839	498	3142377
495	28.7	4.7	0.0	chr5	68683931	68684073	(112854186)	C	L2a	LINE/L2	(0)	3426	3277	3142604
498	35.8	13.4	2.4	chr5	73664624	73665238	(107873021)	+	L2b	LINE/L2	2166	2858	(561)	3150879
327	27.2	4.7	1.2	chr5	74919195	74919276	(106618983)	+	L2b	LINE/L2	3259	3343	(32)	3152743
17590	14.6	5.5	1.9	chr5	75482082	75485186	(106053073)	+	L1MA3	LINE/L1	1125	4380	(3185)	3153618
233	24.5	0.0	0.0	chr5	76104331	76104383	(105433876)	+	L2a	LINE/L2	2019	2071	(1348)	3154504
1085	24.1	7.2	3.0	chr5	76303765	76304097	(105234162)	C	LTR16B2	LTR/ERVL	(0)	462	115	3154787
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
20	11.3	0.0	0.0	chr5	77635902	77635930	(103902329)	+	(A)n	Simple_repeat	1	29	(0)	3156920
465	34.5	9.5	4.3	chr5	77920248	77920770	(103617489)	C	L2b	LINE/L2	(86)	3289	2759	3157382
1154	28.0	11.8	1.5	chr5	77920792	77921248	(103617011)	+	LTR16E1	LTR/ERVL	29	538	(0)	3157383
401	29.1	12.4	11.7	chr5	80124520	80125005	(101413254)	C	MLT1O	LTR/ERVL-MaLR	(52)	490	1	3160907
449	26.7	12.2	2.0	chr5	88453004	88453202	(93085057)	+	MamRep38	DNA/hAT	70	291	(4)	3172352
896	16.7	0.6	1.8	chr5	88890467	88890631	(92647628)	C	MER3	DNA/hAT-Charlie	(46)	163	1	3172902
57	0.0	0.0	0.0	chr5	91351211	91351259	(90187000)	+	(AC)n	Simple_repeat	1	49	(0)	3176121
359	31.4	7.8	2.1	chr5	91351260	91351451	(90186808)	+	MER102b	DNA/hAT-Charlie	138	341	(0)	3176122
440	25.8	7.0	2.2	chr5	96483812	96483946	(85054313)	C	MIRc	SINE/MIR	(125)	143	2	3182625
10025	14.0	1.5	0.3	chr5	100974178	100975918	(80562341)	+	L1M1	LINE/L1	3873	5633	(1932)	3188399
192	30.6	16.3	2.7	chr5	103454782	103454929	(78083330)	+	L2	LINE/L2	2613	2784	(635)	3191462
496	16.7	0.0	3.5	chr5	103454983	103455069	(78083190)	+	LTR41B	LTR/ERVL	20	103	(665)	3191463
573	31.9	6.3	6.6	chr5	106940273	106940668	(74597591)	+	MLT1I	LTR/ERVL-MaLR	9	403	(8)	3195744
1309	25.5	18.1	8.3	chr5	110865328	110866029	(70672230)	C	LTR50	LTR/ERVL	(2)	793	8	3200740
1334	31.5	5.8	3.0	chr5	111365254	111365810	(70172449)	C	L2a	LINE/L2	(2418)	1001	429	3201330
1915	30.9	2.9	5.7	chr5	112533179	112533898	(69004361)	+	LTR78	LTR/ERV1	112	810	(494)	3202879
266	29.0	17.6	2.3	chr5	115713668	115713840	(65824419)	C	MIRb	SINE/MIR	(1)	267	63	3207189
1019	18.3	3.4	1.9	chr5	116627263	116627468	(64910791)	C	MER3	DNA/hAT-Charlie	(0)	209	1	3208363
380	27.8	7.7	1.4	chr5	116627577	116627722	(64910537)	+	LTR79	LTR/ERVL	10	165	(362)	3208364
682	19.6	1.8	4.1	chr5	122264721	122264890	(59273369)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3215698
16	28.5	0.0	0.0	chr5	125180299	125180346	(56357913)	+	(TATT)n	Simple_repeat	1	48	(0)	3219722
419	23.8	5.3	6.0	chr5	125180363	125180496	(56357763)	C	L2a	LINE/L2	(3)	3423	3291	3219723
253	31.6	7.0	0.7	chr5	125798404	125798532	(55739727)	+	L2a	LINE/L2	3254	3387	(39)	3220457
14	27.8	1.4	4.2	chr5	131264260	131264329	(50273930)	+	G-rich	Low_complexity	1	71	(0)	3227656
3312	28.8	10.9	8.3	chr5	131274070	131274806	(50263453)	+	L2a	LINE/L2	2340	3038	(381)	3227669
359	25.4	4.6	0.2	chr5	131274809	131274904	(50263355)	+	L2a	LINE/L2	3275	3424	(2)	3227669
4281	11.2	4.0	4.2	chr5	131899068	131900180	(49638079)	+	L1MA2	LINE/L1	3123	4251	(3314)	3228678
15	22.9	1.5	6.1	chr5	132012792	132012856	(49525403)	+	(CAGAGAG)n	Simple_repeat	1	66	(0)	3228815
1159	28.3	11.0	2.6	chr5	132024617	132025189	(49513070)	+	L2a	LINE/L2	1812	2438	(981)	3228832
15	18.1	2.6	0.0	chr5	133052191	133052250	(48486009)	+	(GCCGGA)n	Simple_repeat	1	61	(0)	3230468
2971	27.2	12.5	1.4	chr5	133294462	133295783	(48242476)	+	L2a	LINE/L2	663	2152	(1267)	3230805
372	30.0	9.5	5.0	chr5	133295784	133296183	(48242076)	+	L2-1_AMi	LINE/L2	206	625	(610)	3230806
1181	29.9	8.4	3.4	chr5	133322404	133322909	(48215350)	C	LTR16C	LTR/ERVL	(2)	536	3	3230831
249	28.1	11.6	3.4	chr5	133521337	133521454	(48016805)	+	MLT1K	LTR/ERVL-MaLR	464	592	(3)	3231067
275	28.8	5.9	3.5	chr5	133521462	133521576	(48016683)	+	L2a	LINE/L2	3309	3426	(0)	3231068
18356	12.2	3.4	1.0	chr5	137164261	137169483	(44368776)	+	L1MA3	LINE/L1	752	7724	(0)	3236598
15	28.2	2.6	3.9	chr5	137594997	137595040	(43943219)	+	GA-rich	Low_complexity	1	64	(14)	3237189
20	17.5	5.4	1.7	chr5	137754199	137754254	(43784005)	+	GA-rich	Low_complexity	1	59	(0)	3237463
15	18.1	0.0	0.0	chr5	137754305	137754336	(43783923)	+	(GCC)n	Simple_repeat	1	32	(0)	3237464
1694	17.2	0.3	0.3	chr5	138662418	138662701	(42875558)	+	AluJb	SINE/Alu	24	307	(5)	3239309
364	26.2	12.2	1.6	chr5	138662721	138662844	(42875415)	+	L2a	LINE/L2	3288	3426	(0)	3239310
40	25.9	2.6	3.1	chr5	138753262	138753416	(42784843)	+	G-rich	Low_complexity	1	159	(0)	3239539
382	31.1	5.7	2.3	chr5	139835923	139836093	(41702166)	C	MamRep564	Unknown	(113)	244	68	3241606
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
16	3.5	6.9	0.0	chr5	140402617	140402645	(41135614)	+	(GACAGA)n	Simple_repeat	1	31	(0)	3242551
695	12.5	1.8	0.0	chr5	140711450	140711561	(40826698)	+	L1MC3	LINE/L1	6747	6860	(925)	3243113
636	14.9	1.6	1.6	chr5	140726264	140726386	(40811873)	+	L1MC3	LINE/L1	6737	6859	(926)	3243152
13	4.0	3.3	6.5	chr5	142314347	142314376	(39223883)	+	(GGCA)n	Simple_repeat	1	31	(0)	3245710
8145	18.7	10.8	1.5	chr5	142458304	142459893	(39078366)	C	MER52A	LTR/ERV1	(0)	1755	1	3246050
248	31.2	4.3	1.8	chr5	146449267	146449380	(35088879)	C	L2b	LINE/L2	(1)	3425	3309	3252612
340	28.8	6.3	0.9	chr5	146449425	146449529	(35088730)	C	MIR3	SINE/MIR	(72)	136	26	3252613
857	30.6	4.1	1.3	chr5	146624335	146624712	(34913547)	+	L2a	LINE/L2	2518	2906	(513)	3252880
294	36.5	2.7	3.1	chr5	146995779	146996004	(34542255)	+	MamRep564	Unknown	10	234	(123)	3253547
668	29.6	7.4	2.3	chr5	147051168	147051385	(34486874)	+	MIRb	SINE/MIR	8	237	(31)	3253639
233	36.2	3.0	1.5	chr5	147051468	147051599	(34486660)	C	L2c	LINE/L2	(220)	3167	3034	3253638
188	24.2	0.0	0.0	chr5	148666532	148666564	(32871695)	+	L2a	LINE/L2	3359	3391	(35)	3256255
364	25.3	4.0	2.0	chr5	149254800	149254948	(32283311)	+	MER5B	DNA/hAT-Charlie	24	175	(3)	3257308
410	33.5	10.5	3.1	chr5	150272097	150272282	(31265977)	C	L2b	LINE/L2	(20)	3406	3203	3259586
238	26.4	8.9	3.0	chr5	150363873	150364040	(31174219)	+	L1ME4c	LINE/L1	544	722	(108)	3259780
6913	17.9	11.0	2.6	chr5	150578970	150580376	(30957883)	+	MER52A	LTR/ERV1	1	1539	(216)	3260283
700	22.5	11.7	1.1	chr5	151080245	151080483	(30457776)	+	MIR	SINE/MIR	5	262	(0)	3261108
12	24.5	4.5	0.0	chr5	151758558	151758601	(29779658)	+	(GGC)n	Simple_repeat	1	46	(0)	3262583
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
188	29.8	8.1	0.0	chr5	152865160	152865216	(28673043)	C	MIRb	SINE/MIR	(11)	257	196	3264340
310	34.6	5.5	0.7	chr5	157216900	157217053	(24321206)	C	L3	LINE/CR1	(64)	4035	3874	3272305
196	37.1	6.1	2.4	chr5	160616720	160616846	(20921413)	C	L2b	LINE/L2	(44)	3331	3200	3278489
532	28.1	7.5	1.5	chr5	160616886	160617084	(20921175)	C	MIR	SINE/MIR	(43)	219	8	3278490
235	37.5	0.0	1.4	chr5	162842984	162843056	(18695203)	C	MIR	SINE/MIR	(163)	99	28	3281680
18	0.0	0.0	0.0	chr5	168528570	168528589	(13009670)	+	(TC)n	Simple_repeat	1	20	(0)	3290249
41	19.6	4.0	5.7	chr5	168528789	168528940	(13009319)	+	(TTCTT)n	Simple_repeat	1	158	(0)	3290250
12	19.8	2.3	4.4	chr5	170184838	170184881	(11353378)	+	(TCTCTGT)n	Simple_repeat	1	45	(0)	3293148
338	34.2	7.3	0.4	chr5	170552619	170552859	(10985400)	C	L2a	LINE/L2	(431)	2988	2730	3293838
207	35.9	11.1	1.6	chr5	170591182	170591368	(10946891)	+	L2b	LINE/L2	3172	3378	(9)	3293919
518	27.1	2.4	0.0	chr5	170611896	170612017	(10926242)	C	L2a	LINE/L2	(1)	3425	3301	3293963
797	35.9	6.9	6.5	chr5	171901523	171902282	(9635977)	C	L3	LINE/CR1	(488)	3611	2848	3296242
23	21.0	0.0	0.0	chr5	173888379	173888454	(7649805)	+	(GGC)n	Simple_repeat	1	76	(0)	3300519
2290	15.4	7.7	2.5	chr5	175318908	175319312	(6218947)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3303218
32	0.0	0.0	2.9	chr5	176609769	176609803	(4928456)	+	(CCCGC)n	Simple_repeat	1	35	(0)	3305650
196	26.8	0.0	0.0	chr5	176610328	176610368	(4927891)	C	MIRc	SINE/MIR	(118)	150	110	3305651
70	0.0	0.0	0.0	chr5	176611363	176611422	(4926837)	+	(AT)n	Simple_repeat	1	60	(0)	3305655
329	29.7	9.2	1.7	chr5	176611606	176611725	(4926534)	C	MIRb	SINE/MIR	(29)	239	110	3305656
743	31.4	1.7	0.0	chr5	176803898	176804123	(4734136)	+	MIR	SINE/MIR	32	261	(1)	3306025
881	37.8	6.0	0.4	chr5	176806121	176806667	(4731592)	+	L3	LINE/CR1	2856	3435	(664)	3306030
73	1.2	3.6	1.1	chr5	177371042	177371125	(4167134)	+	(GGGCCG)n	Simple_repeat	1	87	(0)	3307276
219	37.6	0.0	0.0	chr5	177581623	177581715	(3956544)	C	L2b	LINE/L2	(1341)	2078	1986	3307679
2315	9.5	0.3	0.0	chr5	177581854	177582149	(3956110)	C	AluSc8	SINE/Alu	(14)	297	1	3307680
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
16	0.0	0.0	7.1	chr6	391683	391710	(170414269)	+	(CGCCC)n	Simple_repeat	1	28	(0)	3314760
299	23.2	17.4	2.1	chr6	2232588	2232732	(168573247)	C	MLT1N2	LTR/ERVL-MaLR	(25)	537	366	3317142
21	17.7	0.0	0.0	chr6	4803734	4803771	(166002208)	+	(T)n	Simple_repeat	1	38	(0)	3321087
556	29.9	4.7	7.8	chr6	4853213	4853455	(165952524)	C	MIR	SINE/MIR	(15)	247	13	3321140
19	14.3	8.6	1.6	chr6	4853471	4853528	(165952451)	+	(CCTCTT)n	Simple_repeat	1	63	(0)	3321141
5596	11.1	4.9	0.5	chr6	5054569	5055401	(165750578)	+	MER4D0	LTR/ERV1	1	872	(0)	3321435
13	21.6	1.9	3.7	chr6	5055402	5055447	(165750532)	+	GA-rich	Low_complexity	7	51	(0)	3321436
478	32.5	2.8	7.7	chr6	5422502	5422761	(165383218)	+	MIRb	SINE/MIR	14	260	(8)	3322006
215	34.7	11.2	2.1	chr6	5446515	5446708	(165359271)	C	L2b	LINE/L2	(92)	3283	3070	3322050
2450	9.4	0.0	0.0	chr6	6159995	6160301	(164645678)	+	AluSx1	SINE/Alu	1	307	(5)	3323054
12	4.7	0.0	7.7	chr6	6191691	6191716	(164614263)	+	(GTTT)n	Simple_repeat	1	26	(0)	3323097
18	4.8	0.0	0.0	chr6	10881919	10881940	(159924039)	+	(AG)n	Simple_repeat	1	22	(0)	3330382
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
259	15.1	11.7	0.0	chr6	11535881	11535933	(159270046)	C	L2a	LINE/L2	(4)	3422	3363	3331355
2151	15.6	1.3	2.0	chr6	13211885	13212277	(157593702)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3333882
914	28.3	4.8	2.0	chr6	13212278	13212358	(157593621)	+	L2a	LINE/L2	2829	2909	(510)	3333881
210	30.4	10.8	7.6	chr6	15287728	15287951	(155518028)	+	L2c	LINE/L2	3118	3349	(38)	3337733
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
7764	16.9	11.4	0.8	chr6	20320049	20321457	(150484522)	+	LTR12C	LTR/ERV1	2	1579	(0)	3345812
234	32.4	10.0	0.0	chr6	21441420	21441527	(149364452)	+	L2a	LINE/L2	3303	3422	(4)	3347650
16	21.2	2.6	0.0	chr6	24127075	24127112	(146678867)	+	GA-rich	Low_complexity	1	39	(0)	3351446
15	13.9	0.0	2.9	chr6	24720504	24720537	(146085442)	+	A-rich	Low_complexity	1	34	(0)	3352414
590	26.8	10.3	1.2	chr6	25637965	25638210	(145167769)	+	MLT1G1	LTR/ERVL-MaLR	252	522	(57)	3353889
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
554	5.6	1.4	0.0	chr6	28802800	28802870	(142003109)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359250
22	15.1	1.8	3.6	chr6	29633070	29633124	(141172855)	+	G-rich	Low_complexity	1	56	(0)	3360373
2121	14.8	0.0	0.3	chr6	29732906	29733215	(141072764)	+	AluSz6	SINE/Alu	1	309	(3)	3360585
14	23.6	1.7	4.9	chr6	30311279	30311338	(140494641)	+	(CCACC)n	Simple_repeat	1	61	(0)	3361407
680	30.1	10.1	11.1	chr6	32104937	32105563	(138700416)	+	L2c	LINE/L2	2741	3387	(0)	3364389
1263	23.1	10.2	3.2	chr6	32105720	32106222	(138699757)	+	L1ME3A	LINE/L1	5538	6106	(67)	3364394
2135	15.8	2.8	3.0	chr6	32462764	32463128	(138342851)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3364939
2172	15.7	7.6	2.9	chr6	33061978	33062390	(137743589)	C	MER57C2	LTR/ERV1	(0)	434	1	3365809
372	29.6	9.6	0.0	chr6	33324231	33324399	(137481580)	+	Charlie2b	DNA/hAT-Charlie	35	221	(2561)	3366190
23	25.1	0.0	0.0	chr6	34132556	34132614	(136673365)	+	(TCTG)n	Simple_repeat	1	59	(0)	3367692
15	26.1	0.0	1.9	chr6	35805334	35805385	(135000594)	+	(GGAGCCG)n	Simple_repeat	1	52	(0)	3371201
349	33.8	12.4	4.8	chr6	35942331	35942582	(134863397)	+	L2b	LINE/L2	3097	3370	(5)	3371491
360	14.1	1.5	3.0	chr6	36376313	36376378	(134429601)	C	L2a	LINE/L2	(2)	3424	3360	3372356
380	21.6	0.0	2.6	chr6	36376381	36376456	(134429523)	+	L2a	LINE/L2	3349	3422	(4)	3372356
299	28.3	3.4	8.1	chr6	36376470	36376495	(134429484)	C	MIR	SINE/MIR	(86)	176	152	3372357
2391	9.3	0.3	0.0	chr6	36376496	36376796	(134429183)	+	AluSc8	SINE/Alu	1	302	(9)	3372358
316	32.8	8.9	5.7	chr6	37381426	37381706	(133424273)	C	Tigger16a	DNA/TcMar-Tigger	(551)	406	116	3374582
185	33.7	0.0	2.3	chr6	37524813	37524900	(133281079)	+	X5B_LINE	LINE/CR1	56	141	(44)	3374824
189	24.7	5.5	6.6	chr6	37525005	37525095	(133280884)	C	L2a	LINE/L2	(20)	3406	3317	3374825
975	16.1	1.6	9.3	chr6	37526027	37526167	(133279812)	+	MER5A	DNA/hAT-Charlie	1	129	(60)	3374826
618	27.2	1.8	1.8	chr6	37551555	37551759	(133254220)	C	MIR	SINE/MIR	(2)	260	58	3374882
333	18.6	5.3	0.0	chr6	37556994	37557076	(133248903)	+	MLT1J2	LTR/ERVL-MaLR	346	433	(11)	3374895
351	31.9	5.7	5.7	chr6	37608858	37608887	(133197092)	+	L2b	LINE/L2	3183	3208	(167)	3374989
2152	14.1	0.0	0.6	chr6	37608888	37609199	(133196780)	C	AluSx	SINE/Alu	(1)	311	2	3374990
216	22.0	7.8	0.0	chr6	37792678	37792736	(133013243)	C	MIRc	SINE/MIR	(127)	141	78	3375373
258	32.9	5.4	2.1	chr6	38165024	38165166	(132640813)	+	MER5B	DNA/hAT-Charlie	26	173	(5)	3375993
513	33.8	6.8	3.2	chr6	38229621	38229959	(132576020)	C	Plat_L3	LINE/CR1	(635)	2951	2647	3376070
920	31.2	5.7	4.1	chr6	38229977	38230213	(132575766)	+	L2a	LINE/L2	2571	2816	(603)	3376071
2183	12.0	1.6	0.0	chr6	38347720	38348020	(132457959)	+	AluSz	SINE/Alu	1	306	(6)	3376227
635	27.3	6.3	0.0	chr6	39608951	39609154	(131196825)	C	MIRb	SINE/MIR	(35)	227	12	3378255
379	32.7	2.4	3.0	chr6	40599877	40600043	(130205936)	+	MIR3	SINE/MIR	35	200	(8)	3379755
1008	26.9	10.4	0.3	chr6	42344726	42345009	(128460970)	+	L2a	LINE/L2	3109	3424	(2)	3383062
502	29.0	8.0	5.2	chr6	43635317	43635607	(127170372)	+	L2b	LINE/L2	3076	3375	(0)	3385717
19	22.6	0.0	5.8	chr6	44271052	44271120	(126534859)	+	G-rich	Low_complexity	1	69	(0)	3386883
328	30.5	5.9	0.8	chr6	44285629	44285757	(126520222)	+	L2b	LINE/L2	3220	3355	(20)	3386903
483	28.1	6.8	1.2	chr6	44388863	44389028	(126416951)	+	MIR	SINE/MIR	81	256	(6)	3387107
274	28.6	0.0	1.4	chr6	44389074	44389144	(126416835)	+	L2a	LINE/L2	3356	3425	(1)	3387108
695	25.4	13.0	3.0	chr6	45710484	45710718	(125095261)	+	MamRep564	Unknown	95	356	(1)	3389041
3569	30.8	4.0	2.0	chr6	51571090	51571777	(119234202)	+	HERV16-int	LTR/ERVL	619	1310	(3686)	3397262
446	31.6	2.3	1.2	chr6	52147090	52147259	(118658720)	C	MIRb	SINE/MIR	(77)	191	20	3398051
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
221	27.1	1.7	3.3	chr6	56515736	56515796	(114290183)	+	L2b	LINE/L2	3316	3375	(0)	3404261
13915	15.4	2.5	1.9	chr6	61558576	61561778	(109244201)	C	L1M1	LINE/L1	(3150)	4415	1188	3408195
5772	14.6	2.2	0.2	chr6	68126403	68127326	(102678653)	C	L1PA12	LINE/L1	(4375)	2606	1664	3416328
2390	25.1	3.7	1.4	chr6	68127334	68128143	(102677836)	C	L1M4	LINE/L1	(5494)	2126	1297	3416329
14	21.4	2.6	0.0	chr6	70299545	70299582	(100506397)	+	(TTA)n	Simple_repeat	1	39	(0)	3419025
384	27.5	0.0	0.0	chr6	72446486	72446576	(98359403)	C	MLT1J1	LTR/ERVL-MaLR	(128)	316	226	3421877
233	27.4	0.0	12.1	chr6	73121794	73121876	(97684103)	+	MIR3	SINE/MIR	101	173	(35)	3422757
379	24.7	0.0	8.5	chr6	78517543	78517648	(92288331)	+	L2a	LINE/L2	3325	3421	(5)	3430073
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
415	32.6	3.4	0.0	chr6	79842144	79842287	(90963692)	C	MER91A	DNA/hAT-Tip100	(43)	153	5	3431845
324	35.0	5.5	7.1	chr6	83849691	83849733	(86956246)	+	L2c	LINE/L2	2152	2183	(1236)	3437061
28	0.0	0.0	0.0	chr6	83849734	83849760	(86956219)	+	(TTTG)n	Simple_repeat	1	27	(0)	3437062
324	35.0	5.5	7.1	chr6	83849761	83850011	(86955968)	+	L2c	LINE/L2	2184	2441	(978)	3437061
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
779	25.3	5.8	7.4	chr6	86357673	86358091	(84447888)	+	L1MCc	LINE/L1	24	435	(5988)	3440162
1157	15.3	3.4	2.9	chr6	87590996	87591203	(83214776)	C	MER3	DNA/hAT-Charlie	(0)	209	1	3441831
815	20.6	6.0	0.5	chr6	87591265	87591454	(83214525)	+	Tigger9a	DNA/TcMar-Tigger	294	494	(238)	3441832
388	31.0	10.7	2.5	chr6	88483250	88483643	(82322336)	+	L1MCc	LINE/L1	65	494	(5929)	3443178
789	29.8	13.6	6.4	chr6	89281706	89282476	(81523503)	C	LTR81	LTR/Gypsy	(315)	1078	148	3444496
24	13.5	0.0	0.0	chr6	89411922	89411962	(81394017)	+	(CTC)n	Simple_repeat	1	41	(0)	3444714
2130	16.9	3.6	3.0	chr6	89458295	89458837	(81347142)	C	MLT2A2	LTR/ERVL	(8)	546	1	3444820
197	26.9	14.3	2.7	chr6	89559487	89559597	(81246382)	C	L2c	LINE/L2	(1424)	1995	1870	3444985
5741	20.0	10.1	2.4	chr6	90947025	90948906	(79857073)	+	MER52A	LTR/ERV1	10	1755	(0)	3447052
6877	18.5	5.3	5.2	chr6	94360334	94361994	(76443985)	C	MER52D	LTR/ERV1	(0)	2123	462	3451246
3152	26.7	8.9	5.0	chr6	96115978	96117512	(74688467)	+	L1MD3	LINE/L1	5156	6752	(1243)	3453330
369	27.2	8.1	2.3	chr6	98203666	98203793	(72602186)	C	MIRb	SINE/MIR	(21)	247	112	3455940
14578	27.5	7.4	2.8	chr6	98470799	98472898	(72333081)	+	L1MA6	LINE/L1	1847	3782	(3777)	3456281
1155	8.8	16.2	0.0	chr6	99353089	99353280	(71452699)	C	MER30	DNA/hAT-Charlie	(0)	230	2	3457469
6936	20.9	10.7	1.8	chr6	103183597	103185188	(67620791)	+	MER52A	LTR/ERV1	2	1753	(2)	3462428
2279	11.8	0.0	0.0	chr6	104887670	104887973	(65918006)	C	AluSc	SINE/Alu	(0)	309	6	3464594
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
261	24.2	3.1	3.1	chr6	110173559	110173656	(60632323)	C	MLT1O	LTR/ERVL-MaLR	(20)	522	425	3473252
691	24.7	10.9	4.4	chr6	115666843	115667182	(55138797)	C	L2a	LINE/L2	(0)	3426	3055	3481565
828	20.5	0.0	0.6	chr6	115667193	115667354	(55138625)	+	MER5A1	DNA/hAT-Charlie	1	161	(5)	3481566
37	0.0	0.0	0.0	chr6	116681112	116681145	(54124834)	+	(CCG)n	Simple_repeat	1	34	(0)	3482935
208	27.4	3.8	0.0	chr6	117915954	117916004	(52889975)	+	L2b	LINE/L2	3314	3366	(9)	3484480
867	22.7	7.4	1.0	chr6	117916095	117916383	(52889596)	+	MER5C	DNA/hAT-Charlie	5	313	(0)	3484481
828	31.8	14.8	2.1	chr6	119090124	119090541	(51715438)	C	LTR16E1	LTR/ERVL	(58)	480	1	3486099
18	0.0	4.0	0.0	chr6	120869656	120869680	(49936299)	+	(TGT)n	Simple_repeat	1	26	(0)	3488283
1619	18.1	5.3	5.0	chr6	122092650	122093028	(48712951)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	3489980
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
229	31.2	4.5	4.5	chr6	127520210	127520343	(43285636)	C	L2a	LINE/L2	(2)	3424	3291	3497002
591	27.3	0.6	0.6	chr6	130362186	130362351	(40443628)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3500821
13	24.3	1.9	3.7	chr6	130840311	130840363	(39965616)	+	A-rich	Low_complexity	1	54	(0)	3501461
360	29.9	10.6	7.6	chr6	131191580	131191843	(39614136)	+	MLT1N2	LTR/ERVL-MaLR	187	459	(103)	3501995
16	0.0	0.0	0.0	chr6	131191846	131191862	(39614117)	+	(T)n	Simple_repeat	1	17	(0)	3501996
31	0.0	0.0	0.0	chr6	132589743	132589776	(38216203)	+	(A)n	Simple_repeat	1	34	(0)	3504017
11	13.7	2.0	10.0	chr6	136471453	136471501	(34334478)	+	(TTTTCC)n	Simple_repeat	1	50	(0)	3509938
16674	12.3	2.9	4.8	chr6	136477481	136478300	(34327679)	+	L1MA3	LINE/L1	2304	3138	(3008)	3509949
1339	21.1	3.1	1.4	chr6	137211915	137212260	(33593719)	C	MLT1F-int	LTR/ERVL-MaLR	(959)	530	179	3511121
394	30.8	13.8	2.9	chr6	138160620	138161097	(32644882)	+	L2c	LINE/L2	2273	2810	(609)	3512559
244	32.4	8.3	3.3	chr6	139287799	139287980	(31517999)	+	L2c	LINE/L2	3185	3376	(11)	3514414
269	32.5	11.5	7.1	chr6	139288034	139288397	(31517582)	C	L2b	LINE/L2	(346)	3073	2692	3514413
219	28.8	1.5	1.5	chr6	139802110	139802176	(31003803)	C	L2b	LINE/L2	(7)	3368	3302	3515237
682	31.9	2.4	0.0	chr6	141851201	141851441	(28954538)	+	LTR67B	LTR/ERVL	329	575	(45)	3517771
4885	16.2	1.2	1.9	chr6	141890344	141891150	(28914829)	+	MER52A	LTR/ERV1	954	1755	(0)	3517830
402	32.3	12.1	1.5	chr6	142700164	142700399	(28105580)	C	L2c	LINE/L2	(0)	3387	3117	3518857
54	0.0	0.0	0.0	chr6	146028233	146028278	(24777701)	+	(GT)n	Simple_repeat	1	46	(0)	3523493
442	31.2	12.3	6.9	chr6	148852638	148852943	(21953036)	+	L2b	LINE/L2	3049	3373	(2)	3527553
6429	7.8	1.8	1.2	chr6	148852955	148853835	(21952144)	C	L1PA10	LINE/L1	(1)	6167	5282	3527554
14	16.1	7.1	0.0	chr6	149863784	149863825	(20942154)	+	(CAGCTC)n	Simple_repeat	1	45	(0)	3529317
13	9.7	5.7	2.7	chr6	149864264	149864298	(20941681)	+	(GCCCTGC)n	Simple_repeat	1	37	(0)	3529318
3113	0.4	0.0	0.0	chr6	151847363	151847872	(18958107)	C	L1PA2	LINE/L1	(624)	5531	5022	3532712
18	30.4	0.0	2.9	chr6	153131242	153131310	(17674669)	+	GA-rich	Low_complexity	1	69	(0)	3534483
1346	28.2	8.2	6.8	chr6	153139080	153139963	(17666016)	C	L2a	LINE/L2	(1)	3425	2558	3534496
345	27.3	6.9	7.4	chr6	156109881	156110070	(14695909)	C	L2c	LINE/L2	(0)	3387	3199	3539008
12	32.1	2.8	1.4	chr6	157021871	157021941	(13784038)	+	(CGTCCCG)n	Simple_repeat	1	73	(0)	3540328
868	21.1	13.6	5.4	chr6	157557930	157558225	(13247754)	C	MER33	DNA/hAT-Charlie	(0)	324	1	3541103
209	31.8	0.0	4.9	chr6	158535690	158535785	(12270194)	C	MER5B	DNA/hAT-Charlie	(13)	176	82	3542686
15	15.5	0.0	9.6	chr6	158818193	158818244	(11987735)	+	(CGCC)n	Simple_repeat	1	52	(0)	3543164
21	9.2	2.7	2.6	chr6	159267211	159267247	(11538732)	+	(TC)n	Simple_repeat	1	38	(0)	3543872
33	0.0	0.0	0.0	chr6	159727375	159727405	(11078574)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	3544510
24	12.2	0.0	0.0	chr6	161089002	161089037	(9716942)	+	(AC)n	Simple_repeat	1	36	(0)	3546207
598	27.4	11.2	0.3	chr7	1717968	1718314	(157627659)	C	MLT1J	LTR/ERVL-MaLR	(46)	466	33	3560366
12	13.3	6.4	6.0	chr7	2354969	2355015	(156990958)	+	(CGC)n	Simple_repeat	1	50	(0)	3561252
521	29.9	8.9	6.2	chr7	4470201	4470507	(154875466)	+	L2a	LINE/L2	3106	3421	(5)	3564885
2065	11.6	1.4	0.3	chr7	4470521	4470812	(154875161)	+	AluSq2	SINE/Alu	1	295	(18)	3564886
389	30.2	17.1	4.4	chr7	5218392	5218689	(154127284)	C	L1ME4a	LINE/L1	(168)	5956	5613	3566536
13	20.1	5.0	0.0	chr7	6706693	6706732	(152639241)	+	(CCG)n	Simple_repeat	1	42	(0)	3569975
2802	22.3	9.5	6.3	chr7	7933989	7934840	(151411133)	C	L1MDa	LINE/L1	(5749)	884	3	3571823
2322	11.7	2.1	3.4	chr7	8116914	8117293	(151228680)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3572078
1065	32.8	6.4	6.2	chr7	8282202	8283095	(151062878)	+	ERVL-E-int	LTR/ERVL	2890	3785	(1882)	3572313
443	31.7	17.0	0.5	chr7	12897733	12898138	(146447835)	C	L4_B_Mam	LINE/RTE-X	(206)	4735	4249	3578014
182	31.8	17.5	6.1	chr7	12898202	12898543	(146447430)	+	L2b	LINE/L2	2682	3070	(349)	3578015
265	36.0	0.0	1.1	chr7	24715826	24715915	(134630058)	+	MIR3	SINE/MIR	68	156	(52)	3594276
1607	21.4	3.7	1.5	chr7	24748621	24749018	(134596955)	+	LTR52	LTR/ERVL	12	418	(3)	3594319
780	21.7	0.6	0.0	chr7	24914337	24914493	(134431480)	+	MER3	DNA/hAT-Charlie	52	209	(0)	3594582
1973	30.1	10.7	0.5	chr7	25665053	25665984	(133679989)	C	L2b	LINE/L2	(251)	3124	2093	3595761
457	20.0	10.2	2.6	chr7	26291508	26291661	(133054312)	C	L1ME2z	LINE/L1	(4)	6440	6274	3596788
232	33.3	6.4	1.0	chr7	29344579	29344681	(130001292)	C	Charlie17b	DNA/hAT-Charlie	(846)	358	250	3601451
361	20.2	4.8	1.2	chr7	29990272	29990351	(129355622)	C	MIRb	SINE/MIR	(133)	135	53	3602441
13	7.1	6.2	2.9	chr7	30594954	30594985	(128750988)	+	(TGCTGC)n	Simple_repeat	1	34	(0)	3603361
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
474	17.2	0.0	2.2	chr7	34849255	34849343	(124496630)	+	MIR	SINE/MIR	78	164	(98)	3609829
453	33.9	5.2	3.3	chr7	37102590	37102833	(122243140)	C	MIR	SINE/MIR	(2)	260	12	3613273
274	30.3	10.1	3.4	chr7	37102988	37103134	(122242839)	+	MIRb	SINE/MIR	92	249	(19)	3613274
392	30.3	2.4	1.6	chr7	39184444	39184567	(120161406)	C	MER131	DNA?	(89)	126	2	3616187
1033	28.1	8.8	1.8	chr7	39774480	39775080	(119570893)	C	L2a	LINE/L2	(224)	3202	2563	3617125
1273	25.8	6.0	8.5	chr7	39786531	39787168	(119558805)	C	L2a	LINE/L2	(224)	3202	2563	3617162
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
232	31.4	11.6	2.1	chr7	43926843	43926982	(115418991)	C	L2c	LINE/L2	(202)	3185	3031	3623463
362	25.9	17.3	1.4	chr7	43927099	43927243	(115418730)	C	L1ME4a	LINE/L1	(22)	6102	5930	3623464
245	29.1	11.5	9.4	chr7	45348585	45349603	(113996370)	C	L2a	LINE/L2	(4)	3422	2372	3625832
1284	24.0	8.9	7.5	chr7	45802281	45802919	(113543054)	C	L2a	LINE/L2	(224)	3202	2563	3626413
299	26.0	0.9	6.3	chr7	47720796	47720906	(111625067)	C	MLT1I	LTR/ERVL-MaLR	(0)	448	317	3628968
378	31.7	12.2	4.5	chr7	47937029	47937858	(111408115)	C	L2a	LINE/L2	(0)	3426	2447	3629269
246	30.0	1.0	6.5	chr7	50553246	50553352	(108792621)	C	MamRep564	Unknown	(113)	244	144	3632520
20003	8.8	3.0	0.1	chr7	51164208	51168252	(108177721)	+	L1MA2	LINE/L1	2566	6750	(815)	3633279
1080	25.2	9.6	7.4	chr7	51397291	51397925	(107948048)	+	L2a	LINE/L2	2563	3202	(224)	3633616
622	26.8	10.8	1.5	chr7	51847854	51848176	(107497797)	C	LTR16A	LTR/ERVL	(4)	447	66	3634177
1161	25.1	6.8	7.9	chr7	55752940	55753573	(103592400)	+	L2a	LINE/L2	2563	3197	(229)	3639110
2939	12.0	2.3	3.2	chr7	65374362	65374853	(93971120)	C	MER57E3	LTR/ERV1	(0)	487	1	3647751
797	25.1	18.8	4.8	chr7	65820361	65820920	(93525053)	C	L2a	LINE/L2	(224)	3202	2563	3648537
919	25.0	10.0	7.4	chr7	65832291	65832948	(93513025)	C	L2a	LINE/L2	(194)	3232	2550	3648571
1532	24.9	7.9	1.5	chr7	66894587	66895213	(92450760)	C	L2a	LINE/L2	(194)	3232	2563	3651057
399	30.8	13.7	2.2	chr7	69196260	69196802	(90149171)	+	L2a	LINE/L2	2757	3396	(30)	3656111
1279	16.7	7.3	0.4	chr7	69196803	69197043	(90148930)	C	MLT1F1	LTR/ERVL-MaLR	(1)	568	310	3656112
684	29.2	2.5	7.1	chr7	73749197	73749532	(85596441)	C	L2	LINE/L2	(599)	2820	2501	3665374
242	27.8	13.6	0.8	chr7	74007280	74007413	(85338560)	+	L2c	LINE/L2	2725	2878	(541)	3665976
52	0.0	2.0	0.0	chr7	74264199	74264249	(85081724)	+	(TTTAT)n	Simple_repeat	1	52	(0)	3666616
799	12.0	0.0	0.0	chr7	74297813	74297920	(85048053)	C	AluSx3	SINE/Alu	(12)	299	192	3666706
410	28.6	1.8	2.6	chr7	74297941	74298055	(85047918)	C	L2a	LINE/L2	(0)	3426	3313	3666707
781	13.1	0.8	4.1	chr7	74298064	74298174	(85047799)	+	AluJo	SINE/Alu	1	112	(200)	3666708
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
390	30.3	9.2	3.1	chr7	76204371	76204564	(83141409)	C	MIRb	SINE/MIR	(57)	211	5	3671572
16	13.1	0.0	0.0	chr7	76225461	76225485	(83120488)	+	(C)n	Simple_repeat	1	25	(0)	3671634
789	12.6	0.8	2.4	chr7	76225614	76225740	(83120233)	+	AluJr	SINE/Alu	15	139	(173)	3671635
531	29.8	5.1	2.3	chr7	76225751	76225922	(83120051)	C	MIR	SINE/MIR	(14)	248	72	3671636
289	30.9	6.5	7.6	chr7	77436961	77437157	(81908816)	+	MIR3	SINE/MIR	12	200	(8)	3673762
667	24.8	17.7	4.3	chr7	77826341	77826778	(81519195)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	3	3674553
302	24.9	0.1	1.4	chr7	86909199	86909277	(72436696)	C	MER5A	DNA/hAT-Charlie	(5)	184	95	3686535
272	36.6	1.0	0.0	chr7	90387639	90387739	(68958234)	C	L2a	LINE/L2	(18)	3408	3307	3691004
12	11.1	6.9	0.0	chr7	93249808	93249836	(66096137)	+	(TTTCA)n	Simple_repeat	1	31	(0)	3695015
37	0.0	0.0	0.0	chr7	98613741	98613772	(60732201)	+	(AC)n	Simple_repeat	1	32	(0)	3702993
328	31.9	5.2	1.8	chr7	99557400	99557568	(59788405)	+	L3	LINE/CR1	3765	3939	(160)	3705013
13	8.9	0.0	3.9	chr7	100430820	100430845	(58915128)	+	(CAG)n	Simple_repeat	1	26	(0)	3706566
1331	17.2	0.0	5.3	chr7	101058300	101058545	(58287428)	+	7SK	RNA	2	234	(97)	3707869
260	26.4	1.1	8.1	chr7	101058611	101058709	(58287264)	C	MIRc	SINE/MIR	(1)	267	176	3707870
18	18.1	2.6	0.0	chr7	101162942	101162979	(58182994)	+	(GC)n	Simple_repeat	1	39	(0)	3708137
18	19.5	0.0	5.7	chr7	101163032	101163084	(58182889)	+	(CTC)n	Simple_repeat	1	53	(0)	3708138
5134	12.2	0.7	0.9	chr7	103850684	103851495	(55494478)	+	L1PB1	LINE/L1	5341	6151	(0)	3713257
273	18.7	4.2	9.9	chr7	104045444	104045525	(55300448)	C	MIRb	SINE/MIR	(30)	238	156	3713570
400	32.0	6.3	1.7	chr7	108347920	108348120	(50997853)	+	L2c	LINE/L2	3178	3372	(3)	3720399
2412	16.9	4.5	0.2	chr7	115417707	115418157	(43927816)	+	MER70A	LTR/ERVL	2	472	(0)	3729706
306	29.8	13.8	1.5	chr7	121689900	121690032	(37655941)	+	HAL1	LINE/L1	1383	1534	(973)	3738065
847	21.6	8.0	1.8	chr7	121755187	121755469	(37590504)	C	MER5C	DNA/hAT-Charlie	(4)	309	8	3738148
295	23.3	9.1	2.2	chr7	121755507	121755598	(37590375)	+	MamGypsy2-I	LTR/Gypsy	930	1028	(3138)	3738149
8689	17.9	4.0	1.0	chr7	125555725	125557216	(33788757)	C	MSTA-int	LTR/ERVL-MaLR	(1)	1630	90	3743284
837	16.4	0.0	1.5	chr7	127460180	127460313	(31885660)	+	FLAM_C	SINE/Alu	1	132	(11)	3745761
1863	16.9	2.2	1.3	chr7	128645797	128645970	(30700003)	+	AluJr	SINE/Alu	136	312	(0)	3747716
1321	24.6	8.9	7.4	chr7	128645976	128646613	(30699360)	C	L2a	LINE/L2	(224)	3202	2563	3747718
643	27.9	16.8	3.3	chr7	128941479	128941867	(30404106)	C	LTR16A1	LTR/ERVL	(2)	454	3	3748180
1207	22.7	13.2	4.7	chr7	129098077	129098544	(30247429)	C	MER20B	DNA/hAT-Charlie	(201)	582	68	3748488
304	26.9	6.3	0.0	chr7	129098637	129098740	(30247233)	+	MIRb	SINE/MIR	25	135	(133)	3748491
2454	10.2	0.0	0.0	chr7	129222510	129222803	(30123170)	C	AluSz	SINE/Alu	(18)	294	1	3748754
12	22.1	0.0	0.0	chr7	129434515	129434546	(29911427)	+	(AACGGC)n	Simple_repeat	1	32	(0)	3749137
802	26.6	14.1	2.8	chr7	131591686	131592079	(27753894)	C	LTR16E2	LTR/ERVL	(3)	565	120	3753093
268	35.1	9.4	0.0	chr7	131649512	131649665	(27696308)	+	MIRb	SINE/MIR	47	216	(52)	3753212
243	27.2	14.8	1.1	chr7	132135077	132135169	(27210804)	C	Charlie19a	DNA/hAT-Charlie	(1)	385	278	3753978
352	34.0	7.0	1.4	chr7	132135320	132135534	(27210439)	C	Charlie19a	DNA/hAT-Charlie	(158)	228	1	3753978
1188	27.1	12.9	1.5	chr7	133139437	133139908	(26206065)	+	LTR16E1	LTR/ERVL	1	534	(4)	3755463
14	26.9	3.0	2.9	chr7	135211522	135211587	(24134386)	+	G-rich	Low_complexity	1	68	(0)	3758573
1335	18.3	4.1	4.9	chr7	138171380	138171646	(21174327)	+	MER57E1	LTR/ERV1	129	415	(20)	3763038
2309	10.4	2.0	0.0	chr7	138171647	138171933	(21174040)	+	AluSx	SINE/Alu	2	294	(18)	3763041
1065	19.3	4.0	1.6	chr7	139044364	139044610	(20301363)	+	MER20B	DNA/hAT-Charlie	520	772	(11)	3764801
688	28.5	0.0	5.4	chr7	139044609	139044775	(20301198)	+	MER20B	DNA/hAT-Charlie	63	220	(563)	3764802
1965	11.9	0.3	5.5	chr7	141333691	141334000	(18011973)	C	MER1B	DNA/hAT-Charlie	(0)	339	46	3769126
356	31.5	15.8	2.1	chr7	141715903	141716184	(17629789)	+	L2c	LINE/L2	3044	3371	(16)	3769718
849	22.5	8.8	0.3	chr7	142168669	142168958	(17177015)	C	MER33	DNA/hAT-Charlie	(7)	317	1	3770315
664	24.7	0.7	0.0	chr7	142168966	142169119	(17176854)	C	MER5A1	DNA/hAT-Charlie	(0)	166	12	3770316
183	33.5	13.7	5.3	chr7	144473925	144474475	(14871498)	+	L2a	LINE/L2	1443	2047	(1372)	3773257
438	27.9	7.6	0.0	chr7	150982878	150982999	(8362974)	+	MIR3	SINE/MIR	77	208	(0)	3782737
582	26.3	10.7	3.1	chr7	151839826	151840084	(7505889)	+	MamGypLTR3	LTR/Gypsy	602	882	(12)	3784108
362	22.4	2.3	0.0	chr7	153061951	153062035	(6283938)	C	ERVL-E-int	LTR/ERVL	(2865)	2802	2716	3786454
594	29.6	10.7	3.2	chr7	153062037	153062384	(6283589)	+	LTR16E1	LTR/ERVL	2	380	(158)	3786456
1173	22.9	3.5	5.4	chr7	154409492	154409787	(4936186)	C	L1MD3	LINE/L1	(962)	7033	6729	3788230
492	29.5	0.9	0.0	chr7	155207556	155209003	(4136970)	+	(GT)n	Simple_repeat	1	1461	(0)	3789353
879	24.9	7.0	6.0	chr7	156038600	156039035	(3306938)	+	MLT1C	LTR/ERVL-MaLR	1	441	(26)	3790401
1402	25.9	7.5	0.6	chr7	156385688	156386180	(2959793)	+	L1M5	LINE/L1	3849	4378	(1768)	3790838
358	28.0	10.5	8.2	chr7	156386192	156386619	(2959354)	+	LTR16E1	LTR/ERVL	2	438	(51)	3790839
1510	9.6	0.5	0.0	chr7	158554089	158554285	(791688)	+	AluSc8	SINE/Alu	105	302	(9)	3793363
7628	12.1	5.6	2.4	chr7	158975901	158977135	(368838)	+	MER52C	LTR/ERV1	1	1276	(2)	3793978
2647	5.8	0.0	0.0	chr8	256949	257259	(144881377)	C	AluY	SINE/Alu	(0)	311	1	3794636
1691	21.5	10.8	2.6	chr8	257260	257938	(144880698)	+	MER101-int	LTR/ERV1	2990	3633	(3006)	3794635
265	34.3	1.9	0.4	chr8	726264	727295	(144411341)	+	(CA)n	Simple_repeat	1	1052	(0)	3795115
208	28.4	7.5	1.3	chr8	980553	980627	(144158009)	C	L2b	LINE/L2	(0)	3375	3296	3795363
12	30.2	0.0	6.1	chr8	1054163	1054228	(144084408)	+	(CACG)n	Simple_repeat	1	66	(0)	3795423
430	33.2	9.4	4.9	chr8	6225704	6225923	(138912713)	+	L2a	LINE/L2	2964	3193	(233)	3801684
21	22.2	0.0	6.5	chr8	6708508	6708584	(138430052)	+	G-rich	Low_complexity	1	77	(0)	3802488
1373	25.9	9.5	6.2	chr8	8625706	8626233	(136512403)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	3805037
437	27.9	3.0	0.1	chr8	9088979	9089136	(136049500)	+	MIRb	SINE/MIR	6	166	(96)	3805902
13	14.4	2.3	6.7	chr8	20197135	20197178	(124941458)	+	(CTTCC)n	Simple_repeat	1	45	(0)	3822435
289	21.1	0.0	0.0	chr8	21898391	21898447	(123240189)	C	MER91B	DNA/hAT-Tip100	(131)	59	3	3825248
200	34.9	0.0	0.0	chr8	21898541	21898603	(123240033)	C	MER91B	DNA/hAT-Tip100	(127)	63	1	3825249
3348	21.7	0.1	1.8	chr8	22516475	22517130	(122621506)	+	Tigger17a	DNA/TcMar-Tigger	2	646	(8)	3826413
11	24.9	0.0	2.5	chr8	23246999	23247038	(121891598)	+	(GGCGCG)n	Simple_repeat	1	40	(0)	3827599
183	29.4	5.2	1.1	chr8	23247039	23247131	(121891505)	+	L2b	LINE/L2	3263	3359	(16)	3827600
25	12.5	3.7	1.8	chr8	23483130	23483183	(121655453)	+	(GCA)n	Simple_repeat	1	56	(0)	3827994
399	32.4	3.9	2.0	chr8	25029799	25029949	(120108687)	C	L3	LINE/CR1	(1108)	2991	2838	3830365
37	34.7	0.0	0.0	chr8	25030038	25030150	(120108486)	+	(TA)n	Simple_repeat	1	113	(0)	3830366
291	27.9	7.1	16.8	chr8	25060726	25060975	(120077661)	C	MIRb	SINE/MIR	(8)	260	37	3830418
441	20.4	16.0	1.3	chr8	26593233	26593381	(118545255)	C	MER5B	DNA/hAT-Charlie	(0)	178	4	3833003
2134	11.9	0.3	0.3	chr8	27447577	27447887	(117690749)	+	AluSz6	SINE/Alu	1	311	(1)	3834395
200	36.6	0.0	6.5	chr8	27447958	27448065	(117690571)	C	L2c	LINE/L2	(81)	3306	3206	3834396
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
12	17.6	0.0	0.0	chr8	28890070	28890096	(116248540)	+	(CCTTT)n	Simple_repeat	1	27	(0)	3837024
14	11.6	0.0	3.3	chr8	30156267	30156296	(114982340)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3839161
1172	9.4	0.0	0.0	chr8	31402337	31402496	(113736140)	C	L1PA11	LINE/L1	(1)	6173	6014	3841495
2151	12.1	0.0	0.0	chr8	32725465	32725773	(112412863)	C	AluSg	SINE/Alu	(0)	310	1	3843401
1707	15.7	0.0	9.4	chr8	37880584	37880785	(107257851)	+	AluJo	SINE/Alu	126	300	(12)	3851134
15	14.4	0.0	0.0	chr8	40828949	40828972	(104309664)	+	(A)n	Simple_repeat	1	24	(0)	3855984
19	7.2	0.0	0.0	chr8	40849055	40849083	(104289553)	+	(CCATC)n	Simple_repeat	1	29	(0)	3856010
1031	18.9	0.9	5.2	chr8	41587526	41587754	(103550882)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3857301
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
25	12.2	0.0	0.0	chr8	49911552	49911588	(95227048)	+	(A)n	Simple_repeat	1	37	(0)	3865001
613	28.2	8.4	1.1	chr8	55001165	55001429	(90137207)	+	MamRep4096	DNA/hAT-Tip100	1	286	(140)	3871858
13	24.4	2.2	2.1	chr8	55103145	55103190	(90035446)	+	(CAG)n	Simple_repeat	1	47	(0)	3871977
258	23.3	10.4	1.1	chr8	58276400	58276486	(86862150)	C	Tigger16a	DNA/TcMar-Tigger	(555)	402	307	3876368
297	29.2	5.4	0.0	chr8	58276626	58276731	(86861905)	+	L2b	LINE/L2	3264	3375	(0)	3876369
1066	25.2	7.6	0.7	chr8	60538350	60538656	(84599980)	C	LTR41	LTR/ERVL	(0)	768	439	3879341
12	20.4	5.6	3.5	chr8	61288286	61288339	(83850297)	+	(CCGCTCC)n	Simple_repeat	1	57	(0)	3880437
446	29.4	16.4	1.7	chr8	61495967	61496205	(83642431)	+	L3	LINE/CR1	3816	4096	(3)	3880716
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
17	19.9	2.1	2.0	chr8	66177289	66177336	(78961300)	+	(CGGCTG)n	Simple_repeat	1	49	(0)	3886968
50	24.7	0.0	0.0	chr8	66178094	66178206	(78960430)	+	(ACAC)n	Simple_repeat	1	113	(0)	3886969
7862	13.5	1.6	0.6	chr8	76520386	76522416	(68616220)	C	L1PA16	LINE/L1	(9)	6157	4106	3902339
331	25.0	1.8	12.5	chr8	78879771	78879898	(66258738)	C	MIR3	SINE/MIR	(38)	170	57	3905215
9833	10.6	4.9	0.6	chr8	79544252	79546362	(65592274)	+	L1M1	LINE/L1	1987	4198	(3367)	3906138
17	10.3	0.0	3.0	chr8	79767998	79768030	(65370606)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	3906480
212	31.4	1.9	2.9	chr8	80046973	80047077	(65091559)	C	MIR	SINE/MIR	(2)	260	157	3906917
553	25.7	2.6	4.4	chr8	80047167	80047325	(65091311)	+	MIR	SINE/MIR	23	178	(84)	3906918
668	24.1	7.7	0.1	chr8	80485463	80485637	(64652999)	C	Eulor6D	DNA?	(10)	292	104	3907901
19	25.2	1.2	5.9	chr8	80487371	80487475	(64651161)	+	(GGC)n	Simple_repeat	1	100	(0)	3907904
21	21.8	2.9	7.4	chr8	86342672	86342776	(58795860)	+	G-rich	Low_complexity	1	108	(0)	3915917
12	24.0	0.0	2.4	chr8	86837007	86837047	(58301589)	+	(TATTTT)n	Simple_repeat	1	41	(0)	3916680
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
232	25.0	6.8	0.0	chr8	91680956	91681023	(53457613)	+	MER5B	DNA/hAT-Charlie	32	104	(74)	3922838
532	25.7	8.3	1.0	chr8	93587459	93587648	(51550988)	C	L2a	LINE/L2	(38)	3388	3197	3925442
237	18.6	3.3	1.7	chr8	93587689	93587748	(51550888)	C	MLT1F	LTR/ERVL-MaLR	(487)	61	1	3925443
1467	19.1	12.2	0.3	chr8	94188068	94188371	(50950265)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3926431
282	33.0	1.8	5.9	chr8	96235753	96235871	(48902765)	+	MIRb	SINE/MIR	13	126	(142)	3929960
3191	17.5	6.6	2.2	chr8	97651069	97651692	(47486944)	C	Tigger17a	DNA/TcMar-Tigger	(1)	653	1	3932088
15	27.2	2.0	0.0	chr8	98426887	98426935	(46711701)	+	(GCG)n	Simple_repeat	1	50	(0)	3933666
1176	16.7	7.3	0.8	chr8	100259488	100259729	(44878907)	C	L1MB7	LINE/L1	(0)	6184	5926	3936454
1138	11.9	8.1	12.5	chr8	100507074	100507341	(44631295)	+	MER33	DNA/hAT-Charlie	1	253	(71)	3936916
16	8.7	0.0	0.0	chr8	100951980	100952004	(44186632)	+	(GGC)n	Simple_repeat	1	25	(0)	3937835
2314	9.4	1.3	0.0	chr8	101243515	101243821	(43894815)	C	AluSp	SINE/Alu	(2)	311	1	3938399
332	34.1	15.9	2.5	chr8	101244006	101244106	(43894530)	+	L2c	LINE/L2	2612	2718	(701)	3938400
269	23.0	20.0	3.2	chr8	101313642	101313798	(43824838)	+	L2a	LINE/L2	3227	3416	(10)	3938534
28	3.3	0.0	0.0	chr8	101313801	101313831	(43824805)	+	(AATG)n	Simple_repeat	1	31	(0)	3938535
724	27.8	18.5	0.8	chr8	101960677	101961164	(43177472)	+	L2a	LINE/L2	2808	3426	(0)	3939572
252	29.0	4.1	0.0	chr8	101961170	101961262	(43177374)	+	MIRb	SINE/MIR	155	251	(17)	3939571
13	21.2	2.1	4.2	chr8	102655686	102655732	(42482904)	+	(CGC)n	Simple_repeat	1	48	(0)	3940827
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
377	33.7	4.5	1.0	chr8	103485943	103486134	(41652502)	+	MLT1L	LTR/ERVL-MaLR	404	602	(8)	3942397
489	32.6	1.9	3.6	chr8	103599147	103599395	(41539241)	C	MIRb	SINE/MIR	(10)	258	14	3942554
24	17.6	1.9	0.0	chr8	103599396	103599444	(41539192)	+	(TA)n	Simple_repeat	1	50	(0)	3942555
581	33.7	7.0	5.3	chr8	106811479	106811913	(38326723)	+	L2b	LINE/L2	2930	3372	(3)	3947110
321	30.4	7.4	0.0	chr8	108726531	108726655	(36411981)	C	MER103C	DNA/hAT-Charlie	(51)	246	112	3949793
4413	28.7	6.7	1.9	chr8	108726668	108728486	(36410150)	C	L2a	LINE/L2	(0)	3426	1524	3949794
306	21.2	12.2	7.5	chr8	116671547	116671699	(28466937)	C	L2a	LINE/L2	(0)	3426	3222	3960416
343	30.6	7.1	2.1	chr8	123971191	123971377	(21167259)	C	MamTip2	DNA/hAT-Tip100	(36)	269	73	3972881
504	27.6	11.9	1.5	chr8	124143923	124144124	(20994512)	C	MIRb	SINE/MIR	(37)	231	6	3973166
334	35.8	5.2	8.2	chr8	127216680	127217117	(17921519)	+	L3	LINE/CR1	3559	3982	(117)	3978950
969	22.3	3.2	3.6	chr8	127217153	127217371	(17921265)	+	MER20	DNA/hAT-Charlie	1	218	(1)	3978951
2810	19.0	1.9	0.2	chr8	127554443	127554969	(17583667)	C	MER44B	DNA/TcMar-Tigger	(0)	550	15	3979559
376	31.6	3.3	0.0	chr8	127554985	127555101	(17583535)	C	L2a	LINE/L2	(23)	3403	3283	3979560
1486	21.3	3.8	3.8	chr8	127564305	127564646	(17573990)	C	MLT1G	LTR/ERVL-MaLR	(3)	588	247	3979581
204	34.6	4.3	4.3	chr8	128367815	128367977	(16770659)	C	L2	LINE/L2	(427)	2992	2830	3981345
182	33.0	6.0	6.0	chr8	128808626	128808741	(16329895)	+	L3	LINE/CR1	3979	4094	(5)	3982046
739	14.4	0.0	0.0	chr8	129973698	129973808	(15164828)	+	FLAM_A	SINE/Alu	19	129	(13)	3984075
394	23.3	0.0	0.0	chr8	130749661	130749746	(14388890)	+	L2a	LINE/L2	3303	3388	(38)	3985696
465	28.8	1.2	3.5	chr8	130808664	130808836	(14329800)	C	MIRb	SINE/MIR	(36)	232	64	3985805
240	33.9	1.8	1.8	chr8	132364544	132364654	(12773982)	+	L2a	LINE/L2	3309	3419	(7)	3988430
55	12.4	0.9	0.0	chr8	132364665	132364771	(12773865)	+	(ATGG)n	Simple_repeat	1	108	(0)	3988431
424	30.4	7.6	2.4	chr8	133595044	133595399	(11543237)	C	LTR16D	LTR/ERVL	(0)	651	185	3990793
312	33.3	1.7	0.0	chr8	134409768	134409884	(10728752)	C	L2c	LINE/L2	(38)	3349	3231	3992272
214	23.5	1.4	4.2	chr8	134409877	134409947	(10728689)	C	MIRb	SINE/MIR	(0)	268	200	3992273
1481	29.9	3.9	3.0	chr8	134414925	134415430	(10723206)	C	ERVL-E-int	LTR/ERVL	(1068)	4599	4089	3992284
2062	30.1	5.0	0.8	chr8	134415431	134416096	(10722540)	C	ERVL-E-int	LTR/ERVL	(2154)	3513	2818	3992284
1035	20.9	12.2	11.3	chr8	134844877	134845328	(10293308)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	3992972
206	24.3	1.4	9.1	chr8	134845329	134845386	(10293250)	+	L2a	LINE/L2	3354	3410	(16)	3992971
2496	28.3	8.2	4.4	chr8	135084786	135086521	(10052115)	C	L1MCc	LINE/L1	(4651)	2386	421	3993457
393	34.4	4.2	2.1	chr8	136117740	136118021	(9020615)	C	ERV3-16A3_I-int	LTR/ERVL	(4838)	388	101	3995128
243	35.2	2.8	0.0	chr8	138425754	138425858	(6712778)	C	L2c	LINE/L2	(14)	3373	3266	3998669
342	34.8	6.0	4.2	chr8	138642212	138642403	(6496233)	+	MIR	SINE/MIR	33	234	(34)	3999078
368	22.1	8.5	6.1	chr8	139071066	139071232	(6067404)	+	L1MD3	LINE/L1	6630	6797	(1245)	3999851
237	22.4	0.0	0.0	chr8	139246277	139246325	(5892311)	+	L2a	LINE/L2	3361	3409	(17)	4000043
191	33.1	4.5	5.2	chr8	139658967	139659100	(5479536)	C	L2b	LINE/L2	(213)	3162	3030	4000683
355	26.4	1.0	7.1	chr8	139720207	139720336	(5418300)	+	MIR1_Amn	SINE/MIR	11	133	(75)	4000798
1571	29.8	19.6	2.7	chr8	141515349	141516712	(3621924)	+	L2b	LINE/L2	670	2367	(1052)	4003731
1768	30.4	5.0	5.1	chr8	141887982	141889587	(3249049)	+	L1ME3Cz	LINE/L1	4037	5636	(666)	4004264
769	25.6	1.7	0.4	chr8	141889611	141889838	(3248798)	C	MER20B	DNA/hAT-Charlie	(31)	752	522	4004265
241	24.1	7.1	3.7	chr8	142216720	142216801	(2921835)	+	MIRb	SINE/MIR	96	180	(88)	4004659
84	5.8	3.1	1.5	chr8	142217277	142217405	(2921231)	+	(AAAG)n	Simple_repeat	1	133	(0)	4004661
384	28.2	7.4	2.3	chr8	142231692	142231865	(2906771)	C	MIRb	SINE/MIR	(41)	189	5	4004681
213	31.7	7.9	0.0	chr8	142383649	142383730	(2754906)	C	MIRb	SINE/MIR	(15)	253	165	4004833
264	33.0	7.2	10.3	chr8	142383749	142384235	(2754401)	+	L1M7	LINE/L1	99	569	(5742)	4004834
204	31.0	0.8	0.0	chr8	142495865	142496474	(2642162)	+	(TGGA)n	Simple_repeat	1	615	(0)	4004970
37	0.0	0.0	0.0	chr8	142632098	142632129	(2506507)	+	(AC)n	Simple_repeat	1	32	(0)	4005123
297	22.8	9.8	0.0	chr8	142943862	142943958	(2194678)	C	MIR3	SINE/MIR	(86)	144	30	4005479
49	3.0	0.0	5.3	chr8	143401545	143401620	(1737016)	+	(GGGGA)n	Simple_repeat	1	76	(0)	4006167
14	17.3	4.1	3.9	chr8	144337375	144337423	(801213)	+	G-rich	Low_complexity	1	51	(0)	4007467
35	30.4	1.3	3.1	chr8	144358138	144358294	(780342)	+	G-rich	Low_complexity	1	159	(0)	4007509
13	12.1	0.0	3.5	chr9	2923908	2923936	(135470781)	+	(CTGTG)n	Simple_repeat	1	29	(0)	4012860
466	27.9	0.0	0.0	chr9	3282517	3282627	(135112090)	C	L2a	LINE/L2	(0)	3426	3316	4013403
19487	12.4	3.0	3.0	chr9	3715195	3719579	(134675138)	+	L1M1	LINE/L1	2535	7008	(713)	4013993
623	29.9	5.2	8.1	chr9	4350108	4350511	(134044206)	+	LTR81B	LTR/Gypsy	758	1389	(4)	4014895
36	27.4	3.3	0.0	chr9	5321581	5321700	(133073017)	+	GA-rich	Low_complexity	1	124	(0)	4016314
40	24.9	3.8	1.5	chr9	5397526	5397656	(132997061)	+	GA-rich	Low_complexity	1	136	(0)	4016413
356	32.5	14.8	7.1	chr9	6331117	6331733	(132062984)	C	L2b	LINE/L2	(5)	3370	2721	4017866
187	29.4	6.1	2.1	chr9	9091435	9091528	(129303189)	C	L3	LINE/CR1	(3250)	849	752	4022010
230	18.4	15.5	0.0	chr9	9091582	9091630	(129303087)	+	L2a	LINE/L2	3363	3420	(6)	4022011
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
1357	31.0	7.6	3.2	chr9	16112083	16112772	(122281945)	C	ERVL-E-int	LTR/ERVL	(1719)	3948	3226	4031476
1592	16.5	7.0	0.0	chr9	18634282	18634547	(119760170)	+	AluJb	SINE/Alu	1	286	(26)	4034925
2281	10.5	1.0	0.3	chr9	18634558	18634851	(119759866)	+	AluSx4	SINE/Alu	1	296	(14)	4034926
3589	14.9	2.9	5.5	chr9	19266937	19267538	(119127179)	C	L1M1	LINE/L1	(3323)	4242	3661	4036007
260	28.9	17.2	1.3	chr9	24986451	24986601	(113408116)	C	LTR16E1	LTR/ERVL	(357)	181	2	4043794
304	23.6	1.4	2.7	chr9	26462284	26462357	(111932360)	C	MIR1_Amn	SINE/MIR	(77)	153	79	4045672
189	29.6	4.0	4.0	chr9	26462399	26462472	(111932245)	+	L2c	LINE/L2	3352	3425	(1)	4045668
18	16.0	2.3	2.2	chr9	26462473	26462516	(111932201)	+	(CTGAA)n	Simple_repeat	1	45	(0)	4045673
953	35.1	12.9	3.0	chr9	34411811	34413345	(103981372)	C	L2c	LINE/L2	(249)	3138	1429	4057389
1572	15.0	0.0	12.4	chr9	34430667	34430860	(103963857)	+	AluJb	SINE/Alu	134	301	(11)	4057418
326	34.0	3.3	3.3	chr9	34984004	34984155	(103410562)	+	MIRc	SINE/MIR	108	259	(9)	4058202
2541	5.1	0.0	0.0	chr9	35824670	35824980	(102569737)	C	AluY	SINE/Alu	(0)	311	1	4059481
932	20.1	0.5	1.6	chr9	36747245	36747431	(101647286)	+	MIRb	SINE/MIR	25	209	(59)	4061380
450	26.6	7.8	11.4	chr9	36747544	36747727	(101646990)	+	MLT1K	LTR/ERVL-MaLR	222	393	(202)	4061381
668	25.9	12.2	1.7	chr9	36991695	36991988	(101402729)	+	Tigger16a	DNA/TcMar-Tigger	92	420	(537)	4061846
17	9.1	2.6	5.0	chr9	37785063	37785101	(100609616)	+	(CCGCTT)n	Simple_repeat	1	40	(0)	4063381
372	27.7	6.3	2.2	chr9	38410576	38410756	(99983961)	+	MLT1I	LTR/ERVL-MaLR	210	398	(13)	4064551
193	25.0	1.4	5.7	chr9	39809834	39809921	(98584796)	+	MIRb	SINE/MIR	115	195	(73)	4066646
671	26.2	1.9	5.0	chr9	68717775	68717995	(69676722)	C	MER112	DNA/hAT-Charlie	(36)	225	12	4080320
1025	21.6	3.7	3.7	chr9	68842607	68842822	(69551895)	+	MER20	DNA/hAT-Charlie	4	219	(0)	4080517
18	4.7	0.0	0.0	chr9	69760011	69760032	(68634685)	+	(CG)n	Simple_repeat	1	22	(0)	4082050
9917	20.8	3.0	4.9	chr9	69785773	69786218	(68608499)	C	L1M4	LINE/L1	(7055)	462	2	4082087
17	3.7	3.3	3.2	chr9	73348767	73348796	(65045921)	+	(TTTA)n	Simple_repeat	1	31	(0)	4087959
439	27.6	2.2	2.2	chr9	77575745	77575881	(60818836)	C	MER5B	DNA/hAT-Charlie	(36)	142	6	4094482
444	26.8	0.9	0.9	chr9	83296391	83296503	(55098214)	C	L2b	LINE/L2	(0)	3375	3263	4102648
14	9.3	0.0	0.0	chr9	83707680	83707702	(54687015)	+	(GGC)n	Simple_repeat	1	23	(0)	4103350
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
1673	1.1	0.0	0.0	chr9	87751787	87751971	(50642746)	C	L1PA3	LINE/L1	(5)	6150	5966	4109947
282	30.8	5.9	4.2	chr9	88784910	88785075	(49609642)	C	MLT1J	LTR/ERVL-MaLR	(341)	171	3	4111718
1294	14.1	7.7	0.4	chr9	88890111	88890352	(49504365)	+	L1MA9	LINE/L1	5860	6120	(192)	4111854
14	0.0	8.8	5.4	chr9	90343706	90343739	(48050978)	+	(CTCCAA)n	Simple_repeat	1	37	(0)	4113720
663	34.0	15.0	4.5	chr9	91234631	91235623	(47159094)	C	L2b	LINE/L2	(2)	3373	2265	4114890
852	21.4	7.0	1.0	chr9	93761940	93762142	(44632575)	C	L1ME3	LINE/L1	(47)	6115	5900	4118539
244	21.3	1.3	0.5	chr9	94165714	94165828	(44228889)	C	MIR	SINE/MIR	(98)	170	57	4119125
1148	26.4	9.8	1.2	chr9	94490552	94491068	(43903649)	C	L2a	LINE/L2	(224)	3202	2646	4119708
2605	5.2	0.3	0.0	chr9	94562031	94562335	(43832382)	+	AluY	SINE/Alu	2	307	(4)	4119842
2071	12.8	0.3	3.2	chr9	96479884	96480196	(41914521)	+	AluJo	SINE/Alu	1	304	(8)	4122968
1260	23.5	20.1	3.3	chr9	96480197	96480454	(41914263)	C	L1MC5	LINE/L1	(1946)	7358	7163	4122963
390	32.3	5.5	2.5	chr9	98472282	98472440	(39922277)	C	MIRc	SINE/MIR	(14)	254	91	4126584
262	20.3	0.0	3.3	chr9	99360906	99360966	(39033751)	+	MER20	DNA/hAT-Charlie	90	148	(71)	4128305
621	21.4	12.3	3.0	chr9	99360968	99361165	(39033552)	C	MER20	DNA/hAT-Charlie	(0)	219	1	4128306
19258	11.3	2.1	0.7	chr9	99545937	99551532	(38843185)	C	L1MA3	LINE/L1	(0)	7724	2044	4128670
2122	14.1	0.0	2.7	chr9	100686266	100686564	(37708153)	+	AluSx	SINE/Alu	1	291	(21)	4130581
280	32.2	1.1	0.0	chr9	101536953	101537039	(36857678)	C	LTR16E1	LTR/ERVL	(237)	301	214	4131849
1542	26.9	14.9	5.2	chr9	101537198	101537970	(36856747)	C	L2c	LINE/L2	(684)	2735	1875	4131848
532	33.8	17.2	5.6	chr9	105536065	105536617	(32858100)	C	L3	LINE/CR1	(47)	4052	3369	4137683
321	30.1	16.6	0.0	chr9	107177996	107178181	(31216536)	C	MIRc	SINE/MIR	(27)	241	19	4140177
1089	25.7	9.4	8.6	chr9	107350359	107350872	(31043845)	+	LTR33A	LTR/ERVL	1	519	(1)	4140485
839	19.4	13.9	0.0	chr9	109411003	109411182	(28983535)	C	MER3	DNA/hAT-Charlie	(0)	209	1	4144452
400	29.5	2.4	0.0	chr9	109411185	109411306	(28983411)	C	MIR3	SINE/MIR	(3)	205	81	4144453
211	27.5	5.5	0.0	chr9	109962174	109962242	(28432475)	+	MIR1_Amn	SINE/MIR	113	185	(45)	4145406
415	33.5	4.7	0.3	chr9	114611909	114612099	(23782618)	+	MIR3	SINE/MIR	1	197	(11)	4154054
298	28.2	7.1	7.6	chr9	116350494	116350677	(22044040)	C	MamRep564	Unknown	(117)	240	58	4157206
305	31.2	5.7	5.0	chr9	116354976	116355252	(22039465)	+	L2b	LINE/L2	3080	3358	(17)	4157215
390	29.1	5.4	0.5	chr9	116355252	116355415	(22039302)	C	MIRc	SINE/MIR	(11)	197	36	4157216
44	7.3	0.0	0.0	chr9	116998550	116998607	(21396110)	+	(CATC)n	Simple_repeat	1	58	(0)	4158552
219	30.5	12.6	1.8	chr9	117334316	117334489	(21060228)	+	MIRb	SINE/MIR	33	224	(44)	4159265
204	26.2	4.5	9.3	chr9	117340550	117340667	(21054050)	+	MIRb	SINE/MIR	20	131	(137)	4159276
214	32.1	3.6	0.9	chr9	117409420	117409526	(20985191)	C	L3	LINE/CR1	(75)	4024	3915	4159403
265	28.5	0.0	1.9	chr9	119252967	119253069	(19141648)	+	MIRb	SINE/MIR	161	255	(13)	4162640
2287	14.8	3.1	0.2	chr9	119253195	119253627	(19141090)	+	L1MA4	LINE/L1	5575	6020	(280)	4162641
384	27.3	11.6	2.8	chr9	119690134	119690343	(18704374)	+	L2c	LINE/L2	3148	3359	(16)	4163500
2058	9.6	0.0	6.2	chr9	119747059	119747350	(18647367)	+	AluSq2	SINE/Alu	1	274	(39)	4163610
705	27.9	10.2	2.5	chr9	120252386	120252900	(18141817)	C	L2a	LINE/L2	(0)	3426	2867	4164671
280	30.3	8.4	8.0	chr9	121260207	121260418	(17134299)	+	MamGypLTR3	LTR/Gypsy	664	876	(18)	4166616
236	28.6	11.3	4.4	chr9	121459496	121459766	(16934951)	+	L2	LINE/L2	2329	2620	(799)	4167011
282	33.3	4.2	2.7	chr9	122095470	122095654	(16299063)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	4168291
193	25.4	1.5	5.6	chr9	122912997	122913067	(15481650)	+	L2b	LINE/L2	3303	3370	(5)	4169766
19	4.0	0.0	0.0	chr9	122913184	122913209	(15481508)	+	(TCC)n	Simple_repeat	1	26	(0)	4169767
269	30.1	4.1	5.1	chr9	123291865	123291962	(15102755)	C	MIRb	SINE/MIR	(78)	190	94	4170426
494	32.5	0.0	0.0	chr9	123339760	123339885	(15054832)	+	MIRb	SINE/MIR	69	194	(74)	4170545
12	23.1	3.2	6.2	chr9	123356083	123356145	(15038572)	+	GA-rich	Low_complexity	1	65	(0)	4170589
210	26.1	5.8	0.0	chr9	123928255	123928319	(14466398)	+	MIR	SINE/MIR	48	116	(146)	4171511
14	24.8	1.3	7.7	chr9	123929927	123930003	(14464714)	+	(GCCC)n	Simple_repeat	1	78	(0)	4171513
12	5.5	0.0	0.0	chr9	123930054	123930072	(14464645)	+	(CGC)n	Simple_repeat	1	19	(0)	4171514
24	26.3	0.0	3.7	chr9	123930114	123930207	(14464510)	+	(CGC)n	Simple_repeat	1	90	(0)	4171514
359	31.1	8.2	0.0	chr9	124415725	124415859	(13978858)	+	MIRb	SINE/MIR	36	182	(86)	4172519
330	28.6	9.8	0.0	chr9	125260573	125260691	(13134026)	+	L3	LINE/CR1	3728	3859	(240)	4174292
236	29.6	10.0	8.4	chr9	125260692	125260916	(13133801)	+	Plat_L3	LINE/CR1	3347	3575	(11)	4174293
445	38.2	4.4	1.2	chr9	125732810	125733053	(12661664)	C	MLT1O	LTR/ERVL-MaLR	(220)	322	71	4175240
602	24.4	9.9	0.0	chr9	126083330	126083493	(12311224)	C	MIR	SINE/MIR	(65)	197	16	4175821
14	26.9	1.7	3.4	chr9	126083660	126083667	(12311050)	+	(TCT)n	Simple_repeat	1	57	(0)	4175822
23	21.8	0.0	0.0	chr9	126083668	126083715	(12311002)	+	(T)n	Simple_repeat	1	48	(0)	4175823
12	17.5	12.1	1.4	chr9	126564322	126564387	(11830330)	+	(GACCAGG)n	Simple_repeat	1	74	(0)	4176598
19	14.9	0.0	0.0	chr9	127424461	127424497	(10970220)	+	(GTTGCCA)n	Simple_repeat	1	37	(0)	4178181
83	17.7	0.0	0.0	chr9	127586150	127586297	(10808420)	+	(GT)n	Simple_repeat	1	148	(0)	4178556
252	32.0	5.3	10.8	chr9	127751470	127751728	(10642989)	C	L2c	LINE/L2	(4)	3371	3128	4178929
26	9.9	0.0	0.0	chr9	127785879	127785921	(10608796)	+	(GGC)n	Simple_repeat	1	43	(0)	4179014
39	29.1	1.2	4.1	chr9	127785978	127786147	(10608570)	+	(GGC)n	Simple_repeat	1	172	(0)	4179014
200	29.9	17.1	0.0	chr9	128189969	128190055	(10204662)	+	MIR3	SINE/MIR	39	143	(65)	4179935
300	24.7	3.4	2.3	chr9	128190174	128190260	(10204457)	+	MIRb	SINE/MIR	111	198	(70)	4179936
18	17.5	2.1	2.1	chr9	128275695	128275741	(10118976)	+	G-rich	Low_complexity	1	48	(0)	4180117
201	24.2	1.3	0.7	chr9	129027620	129027690	(9367027)	C	MIRc	SINE/MIR	(28)	180	109	4181909
1955	13.2	4.5	0.0	chr9	129520332	129520627	(8874090)	C	AluSx1	SINE/Alu	(0)	312	3	4183030
335	25.9	1.7	4.9	chr9	129520628	129520658	(8874059)	+	MIR3	SINE/MIR	155	181	(27)	4183029
249	36.6	4.3	0.7	chr9	129520656	129520790	(8873927)	+	MIR1_Amn	SINE/MIR	29	168	(62)	4183031
259	18.2	0.0	5.7	chr9	130926291	130926360	(7468357)	C	MER124	DNA?	(274)	123	58	4186018
255	27.0	3.3	4.3	chr9	130926445	130926537	(7468180)	+	MIRc	SINE/MIR	65	156	(112)	4186019
278	34.6	1.7	7.2	chr9	130944705	130944953	(7449764)	+	LTR85c	LTR/Gypsy?	418	652	(171)	4186061
2423	18.5	4.8	5.7	chr9	131772971	131773449	(6621268)	+	MER74A	LTR/ERVL	1	473	(85)	4187682
226	18.5	6.9	1.8	chr9	131774661	131774715	(6620002)	C	MIR1_Amn	SINE/MIR	(79)	151	94	4187685
320	32.7	3.2	1.9	chr9	131776501	131776656	(6618061)	C	MIR3	SINE/MIR	(7)	201	44	4187689
13	15.5	12.0	0.0	chr9	131874524	131874573	(6520144)	+	G-rich	Low_complexity	1	56	(0)	4187874
431	33.1	9.9	5.3	chr9	132028052	132028501	(6366216)	+	L2a	LINE/L2	2936	3408	(18)	4188099
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
432	28.1	12.6	1.5	chr9	133609631	133609826	(4784891)	+	MIRb	SINE/MIR	49	268	(0)	4190835
354	9.4	0.0	1.5	chr9	135972326	135972390	(2422327)	C	L1MB3	LINE/L1	(7)	6176	6113	4193867
211	36.1	5.8	0.0	chr9	135973374	135973470	(2421247)	+	MIRb	SINE/MIR	1	103	(165)	4193870
17	9.4	2.8	2.7	chr9	136205161	136205196	(2189521)	+	(CGCC)n	Simple_repeat	1	37	(0)	4194150
4407	16.0	7.9	1.4	chr9	136242881	136243724	(2150993)	+	MER4D	LTR/ERV1	1	903	(0)	4194183
17	22.3	6.0	3.4	chr9	136866032	136866114	(1528603)	+	(CCAGCCC)n	Simple_repeat	1	88	(0)	4194887
14	14.2	0.0	3.0	chr9	136866127	136866159	(1528558)	+	(CCCGG)n	Simple_repeat	1	33	(0)	4194888
1145	22.2	11.0	8.3	chr9	137001859	137002123	(1392594)	+	MLT1A	LTR/ERVL-MaLR	85	374	(0)	4195102
454	19.2	3.1	4.6	chr9	137002124	137002169	(1392548)	+	L1MC4	LINE/L1	6820	6864	(1178)	4195101
2201	11.1	1.3	0.0	chr9	137046811	137047108	(1347609)	C	AluSx	SINE/Alu	(9)	303	2	4195149
2549	6.4	0.0	1.0	chr9	137067491	137067802	(1326915)	+	AluSz	SINE/Alu	2	310	(2)	4195185
17	26.8	1.4	4.1	chr9	137139145	137139216	(1255501)	+	(GCC)n	Simple_repeat	1	73	(0)	4195291
12	27.8	0.0	3.9	chr9	137256050	137256100	(1138617)	+	GA-rich	Low_complexity	1	51	(0)	4195391
11	22.4	3.5	5.1	chr9	137295468	137295524	(1099193)	+	(AGTGCGG)n	Simple_repeat	1	59	(0)	4195472
15	12.9	2.8	2.7	chrX	1452708	1452743	(154588152)	+	(CCGGCC)n	Simple_repeat	1	37	(0)	4361000
3658	15.9	0.9	1.2	chrX	5632442	5633146	(150407749)	C	MER51C	LTR/ERV1	(17)	623	1	4368792
193	40.2	3.8	0.0	chrX	5965677	5965778	(150075117)	C	MIRb	SINE/MIR	(93)	175	70	4369347
266	32.4	1.5	10.3	chrX	6386807	6386991	(149653904)	+	MIR3	SINE/MIR	35	201	(7)	4370043
790	22.4	2.9	0.0	chrX	7026631	7026800	(149014095)	+	MER20	DNA/hAT-Charlie	30	204	(15)	4371117
2119	16.4	2.4	0.5	chrX	7579899	7580272	(148460623)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4371906
14023	13.9	2.5	0.4	chrX	14234815	14237124	(141803771)	+	L1M4c	LINE/L1	13	2371	(4013)	4382450
1469	28.2	10.0	2.6	chrX	15219607	15220097	(140820798)	C	LTR16E1	LTR/ERVL	(1)	537	7	4383980
1406	28.8	8.0	0.5	chrX	15224593	15225008	(140815887)	C	LTR16E1	LTR/ERVL	(82)	456	7	4383988
969	28.1	14.8	3.0	chrX	16887148	16887711	(139153184)	C	MLT2F	LTR/ERVL	(0)	663	29	4386907
15	8.8	5.0	4.8	chrX	18147068	18147107	(137893788)	+	(AGAGGCC)n	Simple_repeat	1	42	(0)	4388968
183	36.7	2.7	2.7	chrX	18885028	18885139	(137155756)	C	MIRc	SINE/MIR	(59)	209	98	4390354
12	17.3	0.0	5.6	chrX	20266355	20266390	(135774505)	+	GA-rich	Low_complexity	1	36	(0)	4392858
14	22.5	0.0	2.3	chrX	20914016	20914058	(135126837)	+	(TTTTTA)n	Simple_repeat	1	43	(0)	4393838
964	19.9	0.5	2.6	chrX	21723117	21723307	(134317588)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	4394824
697	33.3	4.3	6.2	chrX	21723308	21723560	(134317335)	+	L3	LINE/CR1	3102	3338	(761)	4394823
289	5.4	2.6	0.0	chrX	24350329	24350365	(131690530)	+	MER68	LTR/ERVL	355	392	(171)	4399349
416	12.3	1.4	0.0	chrX	32137616	32137688	(123903207)	C	L1PA16	LINE/L1	(2)	6164	6091	4410858
10917	11.6	2.0	0.7	chrX	32774778	32776387	(123264508)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	4411682
1654	24.1	0.3	0.8	chrX	35582567	35582917	(120457978)	+	MSTB-int	LTR/ERVL-MaLR	547	895	(756)	4415284
648	10.9	1.1	0.0	chrX	35582918	35583009	(120457886)	+	AluSq2	SINE/Alu	217	309	(4)	4415287
221	35.8	8.7	5.5	chrX	39530419	39530563	(116510332)	+	L2c	LINE/L2	2994	3143	(232)	4420690
35	26.4	2.8	3.4	chrX	41333339	41333480	(114707415)	+	(CTCCC)n	Simple_repeat	1	146	(0)	4424165
243	37.1	10.1	0.5	chrX	42546742	42546928	(113493967)	+	L3b	LINE/CR1	4782	4988	(244)	4426131
565	30.5	4.3	8.3	chrX	42546948	42547187	(113493708)	C	L2c	LINE/L2	(18)	3369	3140	4426125
888	31.6	3.5	6.5	chrX	43527009	43527417	(112513478)	+	LTR16E1	LTR/ERVL	3	398	(140)	4427450
1230	28.6	1.1	2.7	chrX	46903289	46903654	(109137241)	+	L1MD2	LINE/L1	32	391	(6249)	4433030
4654	22.3	4.6	6.4	chrX	47098079	47098919	(108941976)	C	L1ME1	LINE/L1	(5051)	1589	716	4433370
16	18.5	7.0	0.0	chrX	47218695	47218737	(108822158)	+	(CG)n	Simple_repeat	1	46	(0)	4433619
26	21.7	0.0	0.0	chrX	47218894	47218952	(108821943)	+	(CGC)n	Simple_repeat	1	59	(0)	4433620
12	20.1	4.1	3.9	chrX	47619918	47619966	(108420929)	+	(CGCGG)n	Simple_repeat	1	51	(0)	4434536
191	26.5	4.5	1.7	chrX	48996951	48997030	(107043865)	C	MIR1_Amn	SINE/MIR	(36)	172	91	4437250
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
1048	23.4	10.7	3.4	chrX	53036120	53036500	(103004395)	+	L1ME3A	LINE/L1	5748	6159	(14)	4442912
512	23.3	3.0	0.8	chrX	53283739	53283868	(102757027)	C	L2a	LINE/L2	(19)	3407	3275	4443390
371	28.7	11.5	0.1	chrX	53283880	53284077	(102756818)	C	L2a	LINE/L2	(278)	3109	2884	4443390
446	31.0	7.8	4.9	chrX	53284503	53284780	(102756115)	+	L2b	LINE/L2	3078	3408	(18)	4443392
235	33.9	4.8	0.2	chrX	54640098	54640214	(101400681)	+	L2c	LINE/L2	3224	3343	(44)	4446205
5700	20.1	3.6	3.3	chrX	66652802	66654521	(89386374)	+	L1M3c	LINE/L1	3361	5091	(2468)	4453909
9706	18.9	2.5	0.5	chrX	66654526	66657411	(89383484)	+	L1MA4A	LINE/L1	2478	5465	(838)	4453912
1464	24.9	6.9	2.1	chrX	70265096	70265521	(85775374)	C	MLT1L	LTR/ERVL-MaLR	(13)	597	150	4459401
3407	16.9	2.7	0.9	chrX	76477368	76478451	(79562444)	C	L1MA2	LINE/L1	(3395)	4170	3061	4467521
6022	24.0	6.4	3.5	chrX	83185019	83186938	(72853957)	C	MER52A	LTR/ERV1	(0)	1755	11	4474632
2029	9.5	0.0	2.8	chrX	102137919	102138170	(53902725)	C	AluSq2	SINE/Alu	(68)	245	1	4496896
6868	19.2	7.9	1.7	chrX	107324381	107325881	(48715014)	+	MER52A	LTR/ERV1	46	1755	(0)	4503988
5442	11.3	4.1	1.1	chrX	107395507	107396547	(48644348)	C	L1MA2	LINE/L1	(2630)	4935	3863	4504090
368	13.6	1.2	3.6	chrX	107396543	107396626	(48644269)	C	L1MA2	LINE/L1	(4910)	2655	2574	4504090
18795	14.5	2.5	0.7	chrX	109257835	109265406	(46775489)	C	L1MA2	LINE/L1	(2)	7721	8	4506627
3128	26.8	5.1	3.5	chrX	112107093	112109232	(43931663)	C	L1MA8	LINE/L1	(4177)	3388	479	4510932
19774	10.7	2.4	1.0	chrX	115141915	115142819	(40898076)	+	L1MA2	LINE/L1	3653	4546	(3019)	4515000
5609	18.9	4.6	3.1	chrX	120213244	120214992	(35825903)	+	L1MA4	LINE/L1	1251	3043	(4522)	4522595
3311	25.6	5.2	6.3	chrX	120401326	120401490	(35639405)	+	ERV3-16A3_I-int	LTR/ERVL	4643	4821	(405)	4522871
2007	25.3	5.6	0.9	chrX	120401498	120402043	(35638852)	C	LTR75B	LTR/ERVL	(35)	573	1	4522874
12	25.7	0.0	0.0	chrX	129782037	129782073	(26258822)	+	(CTCCTG)n	Simple_repeat	1	37	(0)	4535299
576	32.2	6.2	1.3	chrX	129782074	129782303	(26258592)	+	MIRc	SINE/MIR	16	257	(11)	4535300
264	35.3	13.3	3.3	chrX	131066214	131066544	(24974351)	C	Tigger19b	DNA/TcMar-Tigger	(101)	449	81	4537555
317	32.0	0.0	2.8	chrX	131146870	131146975	(24893920)	C	L2b	LINE/L2	(20)	3355	3253	4537650
208	41.7	2.4	1.2	chrX	131147038	131147282	(24893613)	+	L2	LINE/L2	2704	2951	(468)	4537651
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
311	38.1	8.4	3.5	chrX	135477492	135477809	(20563086)	+	L2a	LINE/L2	1030	1364	(2055)	4544392
467	18.0	10.5	2.3	chrX	135477810	135477844	(20563051)	C	MLT2D	LTR/ERVL	(9)	551	509	4544393
41	2.6	0.0	0.0	chrX	135477845	135477884	(20563011)	+	(GT)n	Simple_repeat	1	40	(0)	4544394
467	18.0	10.5	2.3	chrX	135477885	135477979	(20562916)	C	MLT2D	LTR/ERVL	(52)	508	409	4544393
188	33.5	5.3	1.6	chrX	135693489	135693713	(20347182)	C	MIRb	SINE/MIR	(9)	259	10	4544680
499	29.9	0.7	4.2	chrX	144570067	144570209	(11470686)	C	L2a	LINE/L2	(2)	3424	3287	4558017
36	2.4	4.8	0.0	chrX	148824061	148824102	(7216793)	+	(CT)n	Simple_repeat	1	44	(0)	4563844
1911	26.5	9.3	1.9	chrX	150695014	150695869	(5345026)	C	L2a	LINE/L2	(261)	3165	2233	4566321
912	32.8	1.4	2.8	chrX	153832667	153833018	(2207877)	C	ERVL-E-int	LTR/ERVL	(2332)	3335	2989	4570790