633	13.8	3.3	0.0	chr1	788635	788750	(248167672)	C	MER67C	LTR/ERV1	(0)	711	592	1025
17	12.8	2.9	0.0	chr1	1000024	1000057	(247956365)	+	G-rich	Low_complexity	1	35	(0)	1254
12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
17	10.8	0.0	0.0	chr1	1080049	1080078	(247876344)	+	(CCCCG)n	Simple_repeat	1	30	(0)	1337
80	31.0	3.3	7.0	chr1	1329484	1329883	(247626539)	+	(TGCGTG)n	Simple_repeat	1	487	(257)	1595
17	22.6	3.6	3.5	chr1	1329884	1329939	(247626483)	+	(TG)n	Simple_repeat	1	58	(0)	1596
80	31.0	3.3	7.0	chr1	1329940	1330058	(247626364)	+	(TGCGTG)n	Simple_repeat	488	631	(113)	1595
14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
2629	15.2	7.3	0.0	chr1	1510898	1511404	(247445018)	C	LTR10A	LTR/ERV1	(62)	547	1	1880
13	10.7	9.5	2.2	chr1	1542380	1542421	(247414001)	+	(GGAGCT)n	Simple_repeat	1	46	(0)	1920
17	21.6	0.0	7.3	chr1	1631607	1631674	(247324748)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	2073
233	22.6	3.1	0.0	chr1	2050070	2050131	(246906291)	C	MER5A	DNA/hAT-Charlie	(79)	110	47	2818
14	15.0	5.4	0.0	chr1	2314416	2314452	(246641970)	+	(GGCCCT)n	Simple_repeat	1	39	(0)	3108
224	31.1	15.9	0.0	chr1	2382310	2382441	(246573981)	+	MIRb	SINE/MIR	87	243	(25)	3166
1210	27.5	9.2	2.5	chr1	2583533	2583965	(246372457)	+	LTR40c	LTR/ERVL	1	465	(0)	3360
493	30.6	8.2	3.2	chr1	2583979	2584292	(246372130)	+	MLT1I	LTR/ERVL-MaLR	64	394	(17)	3361
13	18.7	0.0	5.0	chr1	2585490	2585529	(246370893)	+	(GCTCTGG)n	Simple_repeat	1	40	(0)	3363
36	20.6	2.0	2.0	chr1	2586798	2586895	(246369527)	+	(GAGCCGG)n	Simple_repeat	1	100	(0)	3365
12	19.4	0.0	5.1	chr1	2611051	2611089	(246345333)	+	(GCTGGAG)n	Simple_repeat	1	39	(0)	3385
1429	10.7	0.0	7.4	chr1	3108869	3109083	(245847339)	+	AluSx1	SINE/Alu	86	284	(28)	3743
36	0.0	0.0	0.0	chr1	3109084	3109116	(245847306)	+	(AAT)n	Simple_repeat	1	33	(0)	3744
14	16.4	2.9	0.0	chr1	3109318	3109351	(245847071)	+	(TCATTA)n	Simple_repeat	1	35	(0)	3745
233	28.7	12.9	1.0	chr1	3454051	3454152	(245502270)	+	MIRc	SINE/MIR	38	153	(115)	4014
229	26.0	8.8	1.9	chr1	3462593	3462698	(245493724)	C	MIRc	SINE/MIR	(153)	115	2	4022
32	0.0	3.0	0.0	chr1	3610470	3610502	(245345920)	+	(CTC)n	Simple_repeat	1	34	(0)	4148
2474	8.5	0.0	0.0	chr1	5841403	5841707	(243114715)	+	AluSx1	SINE/Alu	1	305	(7)	7356
13	4.8	0.0	4.2	chr1	5902164	5902187	(243054235)	+	(CTAA)n	Simple_repeat	1	24	(0)	7412
1406	25.6	5.4	3.9	chr1	5979819	5980351	(242976071)	+	MER74A	LTR/ERVL	14	554	(4)	7515
269	35.0	13.2	0.8	chr1	5980352	5980590	(242975832)	C	L2a	LINE/L2	(418)	3001	2729	7513
14	23.8	2.0	1.9	chr1	5993052	5993102	(242963320)	+	(CCCTGCC)n	Simple_repeat	1	52	(0)	7535
294	31.9	2.5	3.2	chr1	6025726	6025848	(242930574)	+	MIRb	SINE/MIR	116	237	(31)	7580
366	37.2	8.6	2.8	chr1	6053259	6053661	(242902761)	C	L2a	LINE/L2	(1)	3425	2931	7618
899	24.8	13.6	3.2	chr1	6053740	6053799	(242902623)	+	MLT1C	LTR/ERVL-MaLR	6	66	(401)	7619
21	25.2	1.2	4.8	chr1	6148996	6149077	(242807345)	+	(TCC)n	Simple_repeat	1	83	(0)	7738
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
193	21.4	27.8	0.0	chr1	6486704	6486773	(242469649)	C	MIRc	SINE/MIR	(29)	239	143	8311
474	24.5	11.4	4.7	chr1	6495477	6495647	(242460775)	+	MIR	SINE/MIR	10	193	(69)	8326
625	28.9	5.7	2.7	chr1	6495708	6495929	(242460493)	+	MIRb	SINE/MIR	33	267	(1)	8327
276	31.2	8.2	0.9	chr1	6496143	6496255	(242460167)	+	MIRb	SINE/MIR	95	216	(52)	8328
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
18	0.0	0.0	0.0	chr1	6833020	6833042	(242123380)	+	(CAG)n	Simple_repeat	1	23	(0)	9003
271	25.3	1.3	3.9	chr1	6833207	6833284	(242123138)	C	Charlie29a	DNA/hAT-Charlie	(34)	685	610	9004
232	33.3	7.4	2.0	chr1	6903889	6904041	(242052381)	+	L2	LINE/L2	2256	2417	(1002)	9112
16	5.3	0.0	0.0	chr1	6953754	6953773	(242002649)	+	(T)n	Simple_repeat	1	20	(0)	9182
17	0.0	0.0	0.0	chr1	6954134	6954155	(242002267)	+	(GCCA)n	Simple_repeat	1	22	(0)	9183
16	21.6	0.0	0.0	chr1	6963256	6963287	(241993135)	+	(C)n	Simple_repeat	1	32	(0)	9195
182	37.5	5.2	2.3	chr1	7070311	7070441	(241885981)	+	MIRc	SINE/MIR	21	155	(113)	9350
188	34.1	4.5	1.2	chr1	8314190	8314275	(240642147)	+	MIRb	SINE/MIR	145	233	(35)	11452
1128	26.8	10.7	7.5	chr1	8370090	8370520	(240585902)	+	L1ME1	LINE/L1	5710	6169	(10)	11526
29	3.0	0.0	2.8	chr1	8423870	8423905	(240532517)	+	(GGCCCC)n	Simple_repeat	1	36	(0)	11598
312	33.0	1.5	0.3	chr1	8705454	8705575	(240250847)	+	L2b	LINE/L2	3107	3235	(152)	12086
2253	10.7	0.0	0.0	chr1	8848406	8848715	(240107707)	+	AluSx1	SINE/Alu	1	310	(2)	12383
13	15.2	2.5	4.9	chr1	8848997	8849036	(240107386)	+	(CAGC)n	Simple_repeat	1	41	(0)	12384
612	22.1	1.4	0.0	chr1	8858594	8858733	(240097689)	+	ERVL-B4-int	LTR/ERVL	5572	5713	(1)	12411
255	30.8	3.3	0.8	chr1	8943797	8943914	(240012508)	C	MLT1M	LTR/ERVL-MaLR	(350)	322	202	12606
234	29.6	10.0	5.0	chr1	9181574	9181768	(239774654)	C	MIRb	SINE/MIR	(23)	207	9	13109
3510	16.6	11.1	0.0	chr1	9303811	9304444	(239651978)	+	MLT2B5	LTR/ERVL	1	713	(4)	13335
288	32.0	10.5	5.0	chr1	9827448	9827574	(239128848)	C	MIR	SINE/MIR	(103)	159	16	14458
235	24.8	17.0	2.8	chr1	9827676	9827816	(239128606)	+	MIRb	SINE/MIR	62	226	(42)	14460
17	27.1	1.3	3.9	chr1	10210638	10210713	(238745709)	+	(CACCGCC)n	Simple_repeat	1	77	(0)	15342
252	30.2	13.8	0.8	chr1	10431043	10431162	(238525260)	+	MIRb	SINE/MIR	51	188	(80)	15780
587	27.2	9.9	8.8	chr1	10431361	10431573	(238524849)	C	L1MC4	LINE/L1	(6)	8036	7815	15781
15	12.0	5.6	0.0	chr1	10636201	10636236	(238320186)	+	GA-rich	Low_complexity	1	38	(0)	16161
44	2.4	0.0	0.0	chr1	10783247	10783288	(238173134)	+	(GT)n	Simple_repeat	1	42	(0)	16334
2280	10.4	0.0	0.0	chr1	10826227	10826524	(238129898)	+	AluSz	SINE/Alu	1	298	(14)	16415
3718	22.1	8.4	3.0	chr1	10846435	10846814	(238109608)	C	L1MC3	LINE/L1	(943)	6842	6408	16455
970	24.9	1.2	0.4	chr1	10846808	10847057	(238109365)	C	L1MEc	LINE/L1	(5588)	812	561	16451
186	36.9	7.7	1.4	chr1	10889111	10889330	(238067092)	+	L2b	LINE/L2	2972	3206	(169)	16549
1826	17.8	0.3	1.0	chr1	10981167	10981458	(237974964)	+	AluJo	SINE/Alu	1	290	(22)	16758
14	29.1	0.0	3.5	chr1	11361914	11361971	(237594451)	+	G-rich	Low_complexity	1	58	(0)	17538
1393	14.9	0.0	3.1	chr1	11665044	11665215	(237291207)	C	AluJb	SINE/Alu	(11)	301	131	18192
378	8.5	3.9	0.0	chr1	11907093	11907163	(237049259)	C	FLAM_C	SINE/Alu	(226)	75	1	18701
957	21.1	5.0	0.4	chr1	11952832	11953060	(237003362)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	126	18823
2136	12.9	0.0	0.0	chr1	11953061	11953354	(237003068)	C	AluSx	SINE/Alu	(17)	295	2	18824
302	32.9	16.5	0.7	chr1	12182596	12182748	(236773674)	+	MIRb	SINE/MIR	72	253	(15)	19333
347	32.5	6.6	1.2	chr1	14011192	14011408	(234945014)	+	L2b	LINE/L2	2867	3093	(282)	22428
397	23.4	5.3	0.0	chr1	14165057	14165163	(234791259)	C	MamRep564	Unknown	(130)	227	115	22701
231	24.3	18.9	4.5	chr1	14759688	14759799	(234196623)	+	MIRb	SINE/MIR	23	154	(114)	23799
1000	24.4	9.7	7.3	chr1	14759801	14760282	(234196140)	+	LTR16A2	LTR/ERVL	1	495	(0)	23800
236	16.5	5.4	1.9	chr1	15107044	15107108	(233849314)	C	MIR3	SINE/MIR	(142)	88	18	24553
12	31.0	0.0	1.9	chr1	15524014	15524066	(233432356)	+	G-rich	Low_complexity	1	53	(0)	25466
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
583	22.5	11.3	2.8	chr1	15743443	15743620	(233212802)	C	MIRb	SINE/MIR	(36)	232	38	25922
424	26.2	6.4	3.7	chr1	17012090	17012262	(231944160)	+	MIRb	SINE/MIR	25	207	(61)	28482
1300	9.5	0.6	0.0	chr1	17012264	17012431	(231943991)	+	AluSp	SINE/Alu	136	304	(9)	28483
419	23.3	3.2	1.6	chr1	17013136	17013257	(231943165)	C	L2	LINE/L2	(799)	2620	2497	28485
463	27.1	6.1	2.2	chr1	17013500	17013656	(231942766)	+	MIRc	SINE/MIR	2	162	(46)	28486
267	36.6	1.1	3.6	chr1	17238343	17238535	(231717887)	C	L2b	LINE/L2	(250)	3125	2938	28980
511	32.1	8.0	0.0	chr1	17239261	17239456	(231716966)	+	MIRb	SINE/MIR	48	260	(8)	28982
1281	21.1	5.0	4.6	chr1	17442173	17442491	(231513931)	C	AluJb	SINE/Alu	(0)	312	1	29388
294	35.5	6.8	1.6	chr1	17520778	17520970	(231435452)	C	MIR3	SINE/MIR	(3)	205	6	29621
185	23.7	0.0	0.0	chr1	17521085	17521122	(231435300)	C	L3	LINE/CR1	(16)	4083	4046	29622
260	30.4	12.1	10.5	chr1	17551197	17551310	(231405112)	C	L2b	LINE/L2	(11)	3376	3261	29710
2091	14.4	0.0	0.0	chr1	17607193	17607484	(231348938)	+	AluJo	SINE/Alu	1	292	(20)	29843
273	26.5	12.5	0.0	chr1	17612640	17612737	(231343685)	C	L2b	LINE/L2	(0)	3375	3264	29857
464	31.4	2.5	3.6	chr1	17627762	17627926	(231328496)	+	MIR	SINE/MIR	15	177	(85)	29881
2231	11.9	2.6	0.0	chr1	17628056	17628358	(231328064)	+	AluSx	SINE/Alu	1	311	(1)	29882
231	27.9	0.0	3.4	chr1	17632744	17632832	(231323590)	C	Plat_L3	LINE/CR1	(170)	3416	3331	29891
18	16.1	1.9	5.5	chr1	17633129	17633182	(231323240)	+	G-rich	Low_complexity	1	55	(0)	29892
2252	9.7	0.3	2.9	chr1	17633339	17633647	(231322775)	C	AluSx	SINE/Alu	(7)	305	5	29893
373	30.2	5.4	10.2	chr1	18199161	18199375	(230757047)	+	MIRb	SINE/MIR	4	208	(60)	31147
14	13.4	2.9	2.8	chr1	18199668	18199702	(230756720)	+	(CCTC)n	Simple_repeat	1	36	(0)	31148
486	35.2	7.6	2.5	chr1	18333448	18333683	(230622739)	C	MIRc	SINE/MIR	(6)	262	14	31415
374	30.0	15.7	1.9	chr1	18411093	18411306	(230545116)	C	MIRb	SINE/MIR	(16)	252	4	31587
13	17.1	2.3	4.5	chr1	18631371	18631413	(230325009)	+	(CCTCC)n	Simple_repeat	1	44	(0)	32087
13	21.0	5.9	1.9	chr1	18631441	18631491	(230324931)	+	G-rich	Low_complexity	1	54	(0)	32088
12	18.4	2.4	4.8	chr1	18631484	18631524	(230324898)	+	GA-rich	Low_complexity	1	42	(0)	32089
13	23.3	0.0	0.0	chr1	18636287	18636321	(230320101)	+	GA-rich	Low_complexity	1	35	(0)	32093
372	22.6	9.7	3.4	chr1	18901738	18901872	(230054550)	C	MIR	SINE/MIR	(0)	268	135	32662
16	0.0	0.0	0.0	chr1	18901931	18901947	(230054475)	+	(A)n	Simple_repeat	1	17	(0)	32663
15	14.8	9.3	1.7	chr1	19640836	19640889	(229315533)	+	(GGCCCA)n	Simple_repeat	1	59	(0)	34106
11	32.3	0.0	3.3	chr1	19679176	19679236	(229277186)	+	(CTCAGG)n	Simple_repeat	1	61	(0)	34198
15	18.2	0.0	4.9	chr1	19882621	19882661	(229073761)	+	(GCG)n	Simple_repeat	1	41	(0)	34717
185	31.3	10.3	3.5	chr1	20185679	20185850	(228770572)	C	MIR3	SINE/MIR	(21)	187	3	35261
20	9.8	0.0	0.0	chr1	20185997	20186029	(228770393)	+	(CCCCA)n	Simple_repeat	1	33	(0)	35262
365	34.6	2.2	0.0	chr1	20344912	20345044	(228611378)	+	MIRb	SINE/MIR	16	151	(117)	35573
478	26.8	7.0	7.0	chr1	20345052	20345324	(228611098)	+	Charlie18a	DNA/hAT-Charlie	2	274	(68)	35574
2181	14.2	3.3	3.8	chr1	20378890	20379255	(228577167)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	35643
457	29.9	3.1	3.1	chr1	20522835	20522993	(228433429)	+	MIR3	SINE/MIR	25	183	(25)	35964
358	23.4	4.5	1.8	chr1	21278555	21278663	(227677759)	+	MIRb	SINE/MIR	102	213	(55)	37557
25	17.0	3.8	4.8	chr1	21345380	21345459	(227610963)	+	(GCTCCCG)n	Simple_repeat	1	83	(0)	37717
1569	13.7	0.9	0.0	chr1	21372211	21372429	(227583993)	C	AluJb	SINE/Alu	(9)	303	83	37794
205	40.0	0.0	4.5	chr1	21372484	21372593	(227583829)	C	MIR3	SINE/MIR	(0)	208	104	37795
380	32.0	3.2	0.8	chr1	21648172	21648294	(227308128)	C	MIR3	SINE/MIR	(62)	146	21	38377
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
651	27.3	4.0	0.2	chr1	21814219	21814405	(227142017)	C	MIR	SINE/MIR	(65)	197	5	38745
21	24.8	3.0	4.9	chr1	21911780	21911878	(227044544)	+	(GCCCA)n	Simple_repeat	1	102	(0)	38937
13	27.9	2.1	0.0	chr1	21937482	21937529	(227018893)	+	(GGCCCGC)n	Simple_repeat	1	49	(0)	38998
18	19.4	0.0	6.7	chr1	21937554	21937613	(227018809)	+	G-rich	Low_complexity	1	60	(0)	38999
2242	13.5	0.0	0.0	chr1	21944991	21945301	(227011121)	C	AluJb	SINE/Alu	(1)	311	1	39015
41	29.5	2.5	5.0	chr1	22342488	22342722	(226613700)	+	(AGAGAC)n	Simple_repeat	1	241	(0)	39943
12	15.4	8.9	2.0	chr1	22342914	22342958	(226613464)	+	G-rich	Low_complexity	1	49	(0)	39944
13	17.3	5.1	0.0	chr1	22350732	22350770	(226605652)	+	G-rich	Low_complexity	1	41	(0)	39961
661	25.3	2.4	4.0	chr1	22733594	22733766	(226222656)	C	MIRb	SINE/MIR	(90)	178	9	40804
1847	10.1	5.8	0.4	chr1	23169083	23169359	(225787063)	+	AluJb	SINE/Alu	7	299	(13)	41761
372	23.9	16.8	0.7	chr1	23177199	23177333	(225779089)	C	Charlie4z	DNA/hAT-Charlie	(3)	164	4	41784
296	31.1	3.2	3.2	chr1	23177413	23177535	(225778887)	+	MIRb	SINE/MIR	30	152	(116)	41785
247	28.0	3.9	0.0	chr1	23555538	23555612	(225400810)	C	MIRb	SINE/MIR	(57)	211	134	42732
294	29.5	6.2	11.4	chr1	23555708	23555948	(225400474)	+	MIRb	SINE/MIR	2	232	(36)	42733
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
27	3.5	0.0	0.0	chr1	24187287	24187316	(224769106)	+	(CCCGCCT)n	Simple_repeat	1	30	(0)	44323
15	5.6	0.0	0.0	chr1	24187428	24187446	(224768976)	+	(G)n	Simple_repeat	1	19	(0)	44324
332	26.3	13.2	0.0	chr1	24688942	24689040	(224267382)	C	L3	LINE/CR1	(58)	4041	3928	45466
863	18.4	4.3	3.8	chr1	24725230	24725415	(224231007)	C	MIR	SINE/MIR	(74)	188	2	45578
238	12.9	0.0	0.0	chr1	24744191	24744221	(224212201)	+	MER5A	DNA/hAT-Charlie	150	180	(9)	45640
243	25.9	3.3	0.0	chr1	24744349	24744406	(224212016)	+	L2b	LINE/L2	3308	3367	(8)	45641
2610	3.4	1.0	0.0	chr1	24744411	24744707	(224211715)	+	AluY	SINE/Alu	2	301	(10)	45642
252	25.0	1.6	0.0	chr1	24909468	24909527	(224046895)	+	MIRc	SINE/MIR	123	183	(85)	45975
869	30.5	7.1	5.6	chr1	24915445	24915809	(224040613)	C	L2a	LINE/L2	(126)	3300	2922	45989
211	23.8	4.5	0.0	chr1	24915887	24915949	(224040473)	+	MER5A	DNA/hAT-Charlie	120	185	(4)	45991
485	28.4	13.1	2.2	chr1	25005479	25005708	(223950714)	C	MIR	SINE/MIR	(2)	260	2	46180
14	28.5	1.6	1.6	chr1	25005816	25005876	(223950546)	+	GA-rich	Low_complexity	1	62	(0)	46181
356	28.1	8.8	1.5	chr1	25055755	25055891	(223900531)	+	MIR3	SINE/MIR	1	148	(120)	46284
489	25.4	1.7	3.9	chr1	25055892	25056071	(223900351)	C	LTR16B1	LTR/ERVL	(0)	480	305	46285
271	22.5	12.6	0.0	chr1	25056084	25056194	(223900228)	C	LTR16B1	LTR/ERVL	(352)	128	2	46285
742	29.6	3.7	0.4	chr1	25142157	25142390	(223814032)	C	MIRb	SINE/MIR	(1)	267	26	46465
1077	22.1	22.5	0.0	chr1	25142397	25142803	(223813619)	+	LTR50	LTR/ERVL	1	525	(270)	46466
2302	7.1	0.4	0.4	chr1	25146863	25147143	(223809279)	+	AluSx	SINE/Alu	1	281	(31)	46476
17	15.6	0.0	0.0	chr1	25619633	25619661	(223336761)	+	(GT)n	Simple_repeat	1	29	(0)	47518
843	21.7	9.0	2.4	chr1	25702568	25702775	(223253647)	+	MIR	SINE/MIR	13	235	(27)	47667
199	36.9	2.3	1.2	chr1	25728331	25728415	(223228007)	C	MIRc	SINE/MIR	(19)	249	164	47720
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
12	27.7	3.1	3.0	chr1	25859514	25859535	(223096887)	+	(CCGCC)n	Simple_repeat	1	66	(0)	47961
318	26.3	4.1	4.1	chr1	25927435	25927557	(223028865)	+	MIRc	SINE/MIR	2	124	(144)	48129
15	19.1	0.0	6.4	chr1	26111803	26111849	(222844573)	+	(CGG)n	Simple_repeat	1	47	(0)	48599
15	18.9	0.0	0.0	chr1	26112086	26112121	(222844301)	+	(GCCCCCA)n	Simple_repeat	1	36	(0)	48600
14	29.0	1.9	0.0	chr1	26336443	26336496	(222619926)	+	(CCGCCC)n	Simple_repeat	1	55	(0)	49103
2228	9.3	0.7	0.0	chr1	26408260	26408548	(222547874)	+	AluSz	SINE/Alu	1	291	(21)	49285
195	30.8	2.5	7.1	chr1	26993226	26993351	(221963071)	C	MIR3	SINE/MIR	(76)	132	13	50662
19	8.2	0.0	0.0	chr1	26993578	26993603	(221962819)	+	(G)n	Simple_repeat	1	26	(0)	50663
967	9.4	2.3	0.0	chr1	26998102	26998229	(221958193)	+	AluY	SINE/Alu	1	131	(180)	50668
1526	23.6	14.2	7.6	chr1	27026923	27027829	(221928593)	+	L2a	LINE/L2	2334	3425	(1)	50717
224	27.6	13.0	4.6	chr1	27142225	27142384	(221814038)	+	MIR3	SINE/MIR	34	198	(10)	51028
21	5.6	2.4	4.8	chr1	27307586	27307626	(221648796)	+	(CCTC)n	Simple_repeat	1	42	(0)	51470
238	34.0	1.0	2.8	chr1	27341684	27341789	(221614633)	C	MIRb	SINE/MIR	(145)	123	20	51547
228	29.7	11.1	0.8	chr1	27351676	27351804	(221604618)	C	L2c	LINE/L2	(323)	3064	2921	51564
452	27.3	7.3	2.1	chr1	27513522	27513663	(221442759)	+	MIR1_Amn	SINE/MIR	20	169	(61)	51930
239	31.1	5.3	3.2	chr1	27519895	27519984	(221436438)	+	MamTip2	DNA/hAT-Tip100	56	147	(158)	51948
395	26.1	12.4	0.0	chr1	27519985	27520119	(221436303)	+	MIRb	SINE/MIR	3	162	(100)	51949
519	30.3	20.5	2.1	chr1	27544760	27545336	(221411086)	+	L2b	LINE/L2	2677	3375	(0)	52009
13	0.0	0.0	0.0	chr1	27575174	27575190	(221381232)	+	(CCG)n	Simple_repeat	1	17	(0)	52049
234	28.1	11.1	4.4	chr1	27656035	27656194	(221300228)	C	MIRb	SINE/MIR	(79)	189	18	52230
480	28.7	14.7	0.1	chr1	27656411	27656597	(221299825)	+	MIRb	SINE/MIR	6	215	(53)	52231
200	33.9	0.0	0.0	chr1	28105591	28105652	(220850770)	C	MIR	SINE/MIR	(83)	179	118	53252
278	19.1	0.0	1.6	chr1	28236203	28236266	(220720156)	C	LTR16D1	LTR/ERVL	(484)	191	129	53615
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
181	10.0	3.2	0.0	chr1	28510632	28510661	(220445761)	C	L2a	LINE/L2	(28)	3398	3368	54384
13	20.6	2.4	2.4	chr1	28518618	28518658	(220437764)	+	(GCGG)n	Simple_repeat	1	42	(0)	54411
385	31.9	9.4	0.0	chr1	28523333	28523476	(220432946)	+	MIR	SINE/MIR	11	169	(93)	54423
2133	8.5	0.7	0.7	chr1	28523821	28524114	(220432308)	C	AluSp	SINE/Alu	(19)	294	1	54424
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
17	7.3	3.0	5.9	chr1	28812783	28812815	(220143607)	+	(TG)n	Simple_repeat	1	34	(0)	55209
372	29.2	0.0	0.0	chr1	28882364	28882459	(220073963)	+	MIRc	SINE/MIR	57	152	(116)	55396
196	26.6	18.3	0.0	chr1	28883685	28883778	(220072644)	C	MIRc	SINE/MIR	(100)	168	54	55399
213	30.4	4.7	1.5	chr1	28891329	28891441	(220064981)	C	MIRb	SINE/MIR	(103)	165	53	55421
444	22.6	6.3	14.6	chr1	28891463	28891654	(220064768)	+	MIRc	SINE/MIR	43	217	(51)	55422
384	22.9	10.9	1.6	chr1	28914017	28914140	(220042282)	C	MIR3	SINE/MIR	(11)	197	61	55497
12	20.4	2.4	2.4	chr1	29124363	29124403	(219832019)	+	(CGCCAGA)n	Simple_repeat	1	42	(0)	55967
71	26.8	4.2	3.5	chr1	29148702	29149037	(219807385)	+	(TCCTGC)n	Simple_repeat	1	338	(0)	56026
26	6.3	0.0	0.0	chr1	29149169	29149202	(219807220)	+	(GCTCCG)n	Simple_repeat	1	34	(0)	56027
1290	26.1	6.5	12.0	chr1	29332263	29333003	(219623419)	+	LTR41C	LTR/ERVL	3	699	(2)	56408
814	28.0	14.8	3.4	chr1	29445805	29446299	(219510123)	C	MLT1K	LTR/ERVL-MaLR	(16)	579	19	56620
392	29.9	2.2	4.3	chr1	29523457	29523641	(219432781)	+	MIRb	SINE/MIR	5	185	(83)	56781
413	27.0	9.0	1.7	chr1	29852281	29852496	(219103926)	C	MIRb	SINE/MIR	(37)	231	8	57397
340	26.1	43.8	1.2	chr1	30081113	30081269	(218875153)	+	MIRb	SINE/MIR	45	268	(0)	57806
474	30.9	9.3	3.4	chr1	30081425	30081667	(218874755)	+	MIRc	SINE/MIR	6	260	(8)	57807
304	26.3	3.3	4.7	chr1	30694240	30694375	(218262047)	C	MIRb	SINE/MIR	(130)	132	5	58866
232	22.7	12.8	1.3	chr1	30694479	30694554	(218261868)	C	UCON47	Unknown	(13)	152	67	58867
1890	14.0	5.2	0.3	chr1	31122476	31122768	(217833654)	+	AluJo	SINE/Alu	5	312	(0)	59873
329	27.8	10.8	2.7	chr1	31703657	31703803	(217252619)	C	MIR3	SINE/MIR	(0)	208	48	61174
13	0.0	0.0	0.0	chr1	31704111	31704127	(217252295)	+	(GGA)n	Simple_repeat	1	17	(0)	61175
256	32.1	4.7	0.7	chr1	31751100	31751237	(217205185)	+	L2a	LINE/L2	2940	3085	(341)	61255
439	20.9	0.9	5.7	chr1	31751349	31751470	(217204952)	+	MER94	DNA/hAT-Blackjack	19	134	(0)	61256
581	26.3	14.7	0.0	chr1	31751471	31751728	(217204694)	+	MER113	DNA/hAT-Charlie	132	434	(87)	61257
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
1623	13.5	6.0	5.1	chr1	31945033	31945127	(217011295)	C	MER2	DNA/TcMar-Tigger	(5)	340	256	61670
2162	9.9	0.0	1.9	chr1	31945128	31945439	(217010983)	+	AluSx1	SINE/Alu	1	306	(6)	61671
243	36.4	5.5	2.5	chr1	32072401	32072558	(216883864)	C	L2	LINE/L2	(706)	2713	2551	61998
2476	4.9	2.2	0.7	chr1	32107455	32107762	(216848660)	+	AluSq10	SINE/Alu	1	313	(0)	62098
6250	13.3	3.1	2.2	chr1	32448198	32449195	(216507227)	+	LTR13	LTR/ERVK	1	1007	(0)	62858
305	22.2	0.0	0.0	chr1	32497880	32497933	(216458489)	+	MER5A	DNA/hAT-Charlie	1	54	(135)	62976
194	10.7	0.0	0.0	chr1	32497934	32497961	(216458461)	+	MER5A	DNA/hAT-Charlie	156	183	(6)	62977
2007	14.5	0.3	0.3	chr1	32497964	32498260	(216458162)	+	AluJb	SINE/Alu	1	297	(15)	62978
345	26.3	11.3	4.8	chr1	32713473	32713596	(216242826)	+	L2b	LINE/L2	3023	3155	(220)	63560
2209	7.5	0.0	3.6	chr1	32713617	32713951	(216242471)	C	AluY	SINE/Alu	(0)	311	2	63561
1910	9.4	0.0	12.9	chr1	32713954	32714294	(216242128)	C	AluSx	SINE/Alu	(14)	298	2	63562
17	22.7	1.9	1.9	chr1	32754890	32754942	(216201480)	+	(CCCCCG)n	Simple_repeat	1	54	(0)	63660
283	31.0	6.0	8.6	chr1	32755429	32755615	(216200807)	+	MIR3	SINE/MIR	7	188	(20)	63661
422	31.1	2.6	1.3	chr1	32758711	32758860	(216197562)	C	MIR3	SINE/MIR	(30)	178	27	63668
476	24.6	6.7	0.8	chr1	32759035	32759209	(216197213)	+	MIRb	SINE/MIR	2	198	(10)	63669
191	33.0	4.3	5.1	chr1	32774262	32774379	(216182043)	C	MIR1_Amn	SINE/MIR	(110)	120	4	63702
9211	20.1	5.6	6.1	chr1	32923851	32926332	(216030090)	C	HERVS71-int	LTR/ERV1	(6507)	2471	4	64043
193	29.5	5.4	1.1	chr1	32956933	32957021	(215999401)	+	L2c	LINE/L2	2661	2753	(666)	64098
15	14.4	0.0	0.0	chr1	32957074	32957097	(215999325)	+	(A)n	Simple_repeat	1	24	(0)	64099
756	15.7	1.8	0.0	chr1	32957194	32957301	(215999121)	C	FLAM_A	SINE/Alu	(30)	112	3	64100
191	30.9	6.8	7.3	chr1	32957302	32957507	(215998915)	+	L2c	LINE/L2	3137	3341	(46)	64098
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
244	37.4	11.3	2.4	chr1	33782810	33783234	(215173188)	C	L2b	LINE/L2	(501)	2918	2451	65658
1005	24.4	4.3	9.1	chr1	33783238	33783431	(215172991)	+	MLT1B	LTR/ERVL-MaLR	1	185	(205)	65659
17	21.4	0.0	2.2	chr1	34164953	34164997	(214791425)	+	(GCG)n	Simple_repeat	1	45	(0)	66327
12	23.6	1.8	5.4	chr1	34165084	34165138	(214791284)	+	(CGCGG)n	Simple_repeat	1	56	(0)	66328
754	26.5	3.1	7.1	chr1	34477859	34478126	(214478296)	+	MIR	SINE/MIR	6	262	(0)	66858
494	25.5	3.8	2.5	chr1	34739883	34740039	(214216383)	C	MER5B	DNA/hAT-Charlie	(0)	178	20	67328
85	34.2	1.1	1.8	chr1	34928692	34929068	(214027354)	+	(AC)n	Simple_repeat	1	381	(0)	67682
14	27.8	1.6	3.1	chr1	34929483	34929546	(214026876)	+	G-rich	Low_complexity	1	65	(0)	67684
18	9.4	0.0	5.3	chr1	34929597	34929634	(214026788)	+	(GAGCGG)n	Simple_repeat	1	38	(0)	67685
22	6.1	0.0	2.8	chr1	34929688	34929723	(214026699)	+	(CCCGCC)n	Simple_repeat	1	36	(0)	67686
229	29.5	18.9	1.1	chr1	35719186	35719446	(213236976)	+	L2a	LINE/L2	2949	3266	(160)	69319
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
15	26.6	3.5	0.0	chr1	36156163	36156220	(212800202)	+	G-rich	Low_complexity	1	60	(0)	70247
16	0.0	0.0	0.0	chr1	36156365	36156384	(212800038)	+	(GCC)n	Simple_repeat	1	20	(0)	70248
12	20.1	1.9	7.4	chr1	36178832	36178884	(212777538)	+	(GGCG)n	Simple_repeat	1	54	(0)	70292
12	15.3	5.3	2.5	chr1	36179052	36179089	(212777333)	+	G-rich	Low_complexity	1	40	(0)	70293
331	25.6	6.5	6.5	chr1	36397465	36397602	(212558820)	+	MIRc	SINE/MIR	11	148	(120)	70781
465	27.5	16.3	0.9	chr1	36398030	36398345	(212558077)	C	L2a	LINE/L2	(1)	3425	3052	70782
438	24.0	18.6	1.0	chr1	36450757	36450962	(212505460)	+	MIRb	SINE/MIR	3	260	(8)	70904
293	24.3	5.1	0.3	chr1	36487749	36487908	(212468514)	C	MIR3	SINE/MIR	(1)	229	46	70983
13	0.0	0.0	0.0	chr1	36488130	36488146	(212468276)	+	(GGT)n	Simple_repeat	1	17	(0)	70984
14	18.2	5.7	3.6	chr1	36582120	36582173	(212374249)	+	(CTCT)n	Simple_repeat	1	55	(0)	71179
264	32.4	0.0	5.4	chr1	36582206	36582316	(212374106)	+	MIR3	SINE/MIR	41	145	(63)	71180
603	29.1	13.4	4.3	chr1	36585939	36586261	(212370161)	C	L2a	LINE/L2	(0)	3426	3070	71191
13	15.0	5.1	2.4	chr1	36586286	36586324	(212370098)	+	G-rich	Low_complexity	1	41	(0)	71192
373	29.7	6.3	7.3	chr1	36586465	36586706	(212369716)	+	L2c	LINE/L2	2956	3206	(220)	71193
18	23.1	1.2	7.2	chr1	37034550	37034631	(211921791)	+	(CTCCCCC)n	Simple_repeat	1	83	(0)	71986
14	16.9	0.0	2.9	chr1	37034623	37034657	(211921765)	+	(CACTCA)n	Simple_repeat	1	35	(0)	71987
28	24.1	0.0	2.6	chr1	37040266	37040343	(211916079)	+	(ATGA)n	Simple_repeat	1	78	(0)	71993
239	18.6	15.3	4.1	chr1	37040349	37040448	(211915974)	C	MIRc	SINE/MIR	(155)	113	6	71994
17	15.3	0.0	0.0	chr1	37040618	37040646	(211915776)	+	GA-rich	Low_complexity	1	29	(0)	71995
35	7.0	0.0	0.0	chr1	37255872	37255917	(211700505)	+	(TGT)n	Simple_repeat	1	46	(0)	72360
1073	17.3	2.2	2.6	chr1	37429877	37430107	(211526315)	+	MSTB1	LTR/ERVL-MaLR	203	432	(0)	72712
983	33.3	12.8	4.2	chr1	37621966	37622370	(211334052)	C	L2a	LINE/L2	(1080)	2339	1879	73092
852	15.6	8.4	0.0	chr1	37622382	37622522	(211333900)	+	AluJr	SINE/Alu	141	294	(18)	73103
325	35.1	7.2	1.8	chr1	37622541	37622879	(211333543)	C	L2	LINE/L2	(1153)	2266	1908	73104
326	30.9	4.8	1.4	chr1	37633109	37633249	(211323173)	C	MIRb	SINE/MIR	(73)	195	50	73125
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
313	17.4	17.3	2.3	chr1	38004770	38004857	(210951565)	+	Arthur1B	DNA/hAT-Tip100	1	104	(1121)	73896
12	12.6	0.0	3.6	chr1	38005060	38005087	(210951335)	+	(TCTG)n	Simple_repeat	1	28	(0)	73897
22	15.6	4.0	0.0	chr1	38005111	38005160	(210951262)	+	(GCCCCC)n	Simple_repeat	1	52	(0)	73898
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
13	22.0	4.8	0.0	chr1	38046030	38046071	(210910351)	+	(GCC)n	Simple_repeat	1	44	(0)	73970
20	14.4	3.3	6.3	chr1	38046188	38046248	(210910174)	+	(CCG)n	Simple_repeat	1	63	(0)	73971
226	35.5	4.5	6.6	chr1	38048809	38048989	(210907433)	+	MIRc	SINE/MIR	46	222	(46)	73974
877	25.1	5.2	0.5	chr1	38259108	38259327	(210697095)	+	MIRb	SINE/MIR	24	254	(14)	74378
202	21.7	1.3	3.4	chr1	38267534	38268061	(210688361)	+	(TCCC)n	Simple_repeat	1	535	(0)	74396
514	30.2	18.0	0.8	chr1	38268110	38268366	(210688056)	C	L2c	LINE/L2	(47)	3340	3030	74397
18	11.2	0.0	0.0	chr1	38270715	38270744	(210685678)	+	(GCA)n	Simple_repeat	1	30	(0)	74401
4843	15.5	4.9	1.7	chr1	38315009	38315842	(210640580)	+	MER21B	LTR/ERVL	1	862	(6)	74491
15	13.9	0.0	0.0	chr1	38511668	38511691	(210444731)	+	(A)n	Simple_repeat	1	24	(0)	74795
232	35.9	9.9	6.0	chr1	38575093	38575374	(210381048)	+	L2b	LINE/L2	3071	3364	(11)	74935
1987	10.3	7.6	0.7	chr1	39001284	39001565	(209954857)	C	AluSp	SINE/Alu	(10)	303	1	75827
453	22.6	2.3	5.3	chr1	39001571	39001703	(209954719)	C	AluSz6	SINE/Alu	(181)	131	3	75828
14	19.2	0.0	0.0	chr1	39133487	39133505	(209822917)	+	(TTTTC)n	Simple_repeat	1	19	(0)	76158
28	7.0	0.0	4.1	chr1	39133506	39133554	(209822868)	+	(CTC)n	Simple_repeat	1	49	(0)	76159
2513	6.5	0.0	0.0	chr1	39257308	39257601	(209698821)	C	AluY	SINE/Alu	(17)	294	1	76426
2247	21.3	8.2	3.6	chr1	39257602	39257864	(209698558)	+	L1ME1	LINE/L1	5890	6153	(26)	76425
503	17.4	0.0	1.0	chr1	40373376	40373474	(208582948)	+	MIR	SINE/MIR	164	261	(1)	78693
12	24.3	0.0	8.1	chr1	40373475	40373536	(208582886)	+	(CTTC)n	Simple_repeat	1	62	(0)	78694
13	23.1	1.8	5.3	chr1	40373648	40373703	(208582719)	+	G-rich	Low_complexity	1	57	(0)	78695
18	17.0	1.7	6.6	chr1	40783671	40783730	(208172692)	+	(CGCT)n	Simple_repeat	1	61	(0)	79495
1650	25.3	10.1	2.1	chr1	40800004	40800524	(208155898)	+	MER115	DNA/hAT-Tip100	127	693	(0)	79531
732	28.3	0.5	5.1	chr1	40922371	40922586	(208033836)	C	MIRb	SINE/MIR	(48)	220	15	79834
650	27.3	6.2	1.0	chr1	40922700	40922899	(208033523)	+	MIRc	SINE/MIR	15	225	(43)	79835
17	16.9	3.3	6.5	chr1	41371892	41371951	(207584471)	+	(CCT)n	Simple_repeat	1	62	(0)	80687
383	34.8	9.5	5.2	chr1	41412445	41412865	(207543557)	C	L2b	LINE/L2	(1)	3374	2934	80760
284	29.3	6.8	4.5	chr1	41486243	41486399	(207470023)	C	MIRb	SINE/MIR	(32)	236	76	80903
17	26.2	2.8	2.7	chr1	42167707	42167778	(206788644)	+	G-rich	Low_complexity	1	74	(0)	82038
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
20	15.8	0.0	0.0	chr1	42765863	42765899	(206190523)	+	(ATC)n	Simple_repeat	1	37	(0)	83110
388	28.6	6.8	1.4	chr1	42816685	42816893	(206139529)	+	MIRc	SINE/MIR	2	222	(46)	83211
180	35.6	0.0	0.0	chr1	42845775	42845833	(206110589)	C	MIRb	SINE/MIR	(185)	83	25	83266
229	27.4	0.0	0.0	chr1	42846090	42846151	(206110271)	+	MIR3	SINE/MIR	141	202	(6)	83267
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
440	25.0	1.9	0.0	chr1	42959265	42959368	(205997054)	+	MIR	SINE/MIR	132	237	(25)	83431
224	31.6	3.0	6.7	chr1	42959491	42959595	(205996827)	+	L2c	LINE/L2	3085	3185	(202)	83432
503	29.4	9.3	0.8	chr1	42963300	42963546	(205992876)	+	L2b	LINE/L2	2363	2632	(787)	83439
925	27.8	13.8	0.7	chr1	43009014	43009600	(205946822)	+	L1ME4a	LINE/L1	5292	5967	(157)	83569
33	35.7	0.5	4.3	chr1	43270234	43270468	(205685954)	+	(GAGTTG)n	Simple_repeat	1	226	(0)	84062
17	11.0	4.9	2.3	chr1	43531830	43531870	(205424552)	+	(CGTCC)n	Simple_repeat	1	43	(0)	84466
13	21.7	0.0	2.6	chr1	43550348	43550386	(205406036)	+	(GCCCC)n	Simple_repeat	1	39	(0)	84486
276	30.1	8.4	8.2	chr1	43550543	43550945	(205405477)	C	L2b	LINE/L2	(35)	3391	3011	84487
320	23.1	7.5	3.4	chr1	43632477	43632655	(205323767)	+	L1ME3G	LINE/L1	3	189	(735)	84594
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
320	29.0	10.9	5.1	chr1	43766864	43767137	(205189285)	C	L2c	LINE/L2	(245)	3142	2736	84892
3998	21.9	6.3	9.9	chr1	43767461	43767675	(205188747)	+	L1M5	LINE/L1	2719	2954	(3192)	84893
9322	17.4	1.2	0.1	chr1	43840807	43842332	(205114090)	C	MSTA-int	LTR/ERVL-MaLR	(107)	1544	2	85020
232	16.7	0.0	2.3	chr1	43842334	43842376	(205114046)	C	MSTA	LTR/ERVL-MaLR	(0)	428	387	85020
954	12.4	5.8	0.0	chr1	43842376	43842520	(205113902)	+	MSTA	LTR/ERVL-MaLR	248	401	(27)	85023
12	24.0	4.5	0.0	chr1	43968350	43968393	(204988029)	+	G-rich	Low_complexity	1	46	(0)	85225
387	33.7	7.0	3.0	chr1	44029444	44029746	(204926676)	+	L2b	LINE/L2	3022	3337	(38)	85304
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
16	14.2	0.0	0.0	chr1	44405661	44405691	(204550731)	+	(GGACTG)n	Simple_repeat	1	31	(0)	85974
27	0.0	0.0	0.0	chr1	44501046	44501071	(204455351)	+	(GTGGGG)n	Simple_repeat	1	26	(0)	86147
2425	8.1	0.3	2.8	chr1	44799264	44799583	(204156839)	+	AluSp	SINE/Alu	2	313	(0)	86739
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
296	29.8	16.8	4.0	chr1	46037597	46037823	(202918599)	C	L2b	LINE/L2	(542)	2877	2616	89205
294	31.4	12.4	5.5	chr1	46340413	46340614	(202615808)	+	L2b	LINE/L2	3009	3226	(149)	89844
2261	8.6	2.6	0.3	chr1	46394928	46395231	(202561191)	C	AluSx1	SINE/Alu	(0)	312	2	89970
220	34.8	5.4	4.8	chr1	46395232	46395349	(202561073)	C	MIR3	SINE/MIR	(50)	158	36	89969
709	8.9	0.0	0.0	chr1	46401328	46401428	(202554994)	+	LTR12C	LTR/ERV1	1479	1579	(0)	89980
219	15.0	10.4	9.1	chr1	46401608	46401673	(202554749)	+	MIRb	SINE/MIR	99	165	(103)	89981
16	24.5	0.0	0.0	chr1	46718973	46719016	(202237406)	+	(CTCCGG)n	Simple_repeat	1	44	(0)	90530
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
16	25.8	0.0	0.0	chr1	47229392	47229429	(201726993)	+	GA-rich	Low_complexity	1	38	(0)	91123
435	29.7	8.1	0.7	chr1	47243815	47243963	(201712459)	+	MIR3	SINE/MIR	33	193	(15)	91157
1543	14.1	13.1	1.5	chr1	47400738	47400999	(201555423)	C	AluJo	SINE/Alu	(14)	298	2	91523
1296	22.7	13.2	2.8	chr1	47401007	47401575	(201554847)	+	L2a	LINE/L2	2772	3425	(1)	91524
1061	25.5	12.0	3.8	chr1	47480372	47480904	(201475518)	C	L1MC4	LINE/L1	(1)	8041	7459	91681
215	36.3	2.4	0.0	chr1	47532837	47532961	(201423461)	+	MIR3	SINE/MIR	2	130	(138)	91808
36	19.1	2.4	6.3	chr1	47533110	47533232	(201423190)	+	(CTC)n	Simple_repeat	1	126	(0)	91809
240	33.3	3.7	0.0	chr1	47572738	47572815	(201383607)	C	MIR3	SINE/MIR	(86)	122	42	91890
256	22.4	15.1	2.3	chr1	47592625	47592718	(201363704)	+	MIR1_Amn	SINE/MIR	17	125	(105)	91932
37	0.0	0.0	0.0	chr1	47738901	47738932	(201217490)	+	(AC)n	Simple_repeat	1	32	(0)	92212
407	35.5	9.4	1.6	chr1	48038156	48038341	(200918081)	C	MIRb	SINE/MIR	(54)	214	13	92785
336	31.5	1.4	1.6	chr1	48093929	48094099	(200862323)	C	MER5B	DNA/hAT-Charlie	(23)	166	1	92895
183	28.4	13.0	8.0	chr1	48708585	48708722	(200247700)	+	MamRTE1	LINE/RTE-BovB	2068	2213	(1599)	93856
253	27.4	13.1	1.3	chr1	48708967	48709121	(200247301)	+	MIR3	SINE/MIR	5	180	(28)	93857
232	28.6	0.0	0.0	chr1	50323932	50323987	(198632435)	+	MIRb	SINE/MIR	110	165	(103)	96577
313	25.0	4.4	5.3	chr1	50416054	50416167	(198540255)	+	MIRc	SINE/MIR	95	207	(61)	96740
18	22.9	4.2	2.7	chr1	50416474	50416544	(198539878)	+	(CTCTCTC)n	Simple_repeat	1	74	(0)	96741
14	13.1	0.0	0.0	chr1	50960185	50960210	(197996212)	+	(CGAG)n	Simple_repeat	1	26	(0)	97705
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
15	17.8	9.0	2.7	chr1	51506784	51506850	(197449572)	+	(CAGAA)n	Simple_repeat	1	73	(0)	98805
23	13.7	2.7	7.8	chr1	51519364	51519438	(197436984)	+	(CCCG)n	Simple_repeat	1	77	(0)	98834
244	31.8	7.0	0.9	chr1	51519558	51519665	(197436757)	+	MIRb	SINE/MIR	88	202	(66)	98835
17	23.5	0.0	0.0	chr1	52265247	52265291	(196691131)	+	(CTTTTCC)n	Simple_repeat	1	45	(0)	100501
184	36.2	10.2	0.6	chr1	52632756	52632933	(196323489)	+	MIRb	SINE/MIR	2	198	(70)	101303
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
15	13.2	3.0	0.0	chr1	53326264	53326308	(195630114)	+	G-rich	Low_complexity	1	46	(0)	102873
221	28.7	0.0	13.4	chr1	53682251	53682399	(195274023)	C	L2b	LINE/L2	(1)	3374	3246	103544
536	22.6	11.1	3.7	chr1	53889349	53889564	(195066858)	+	MIRb	SINE/MIR	9	242	(26)	103980
253	25.6	7.5	0.0	chr1	53945136	53945221	(195011201)	C	ORSL-2a	DNA/hAT-Tip100	(24)	318	226	104097
384	32.6	6.6	2.1	chr1	54123823	54124010	(194832412)	C	L2b	LINE/L2	(1)	3374	3178	104460
390	35.0	1.6	0.6	chr1	54124056	54124236	(194832186)	+	L2b	LINE/L2	2958	3140	(235)	104461
541	29.4	7.4	0.5	chr1	54124318	54124519	(194831903)	+	MIRc	SINE/MIR	52	268	(0)	104462
7271	9.8	2.5	2.3	chr1	54164781	54165869	(194790553)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	490	104560
3731	6.7	0.0	0.0	chr1	54166117	54166609	(194789813)	C	THE1A-int	LTR/ERVL-MaLR	(1087)	493	1	104560
2749	8.0	1.1	0.0	chr1	54166610	54166960	(194789462)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	104560
514	28.4	2.9	1.2	chr1	54331994	54332164	(194624258)	C	MIR3	SINE/MIR	(22)	186	13	104874
295	26.1	12.0	2.6	chr1	54332371	54332523	(194623899)	+	MIR3	SINE/MIR	3	167	(41)	104875
2118	10.3	0.0	0.3	chr1	54414746	54415036	(194541386)	C	AluSx1	SINE/Alu	(22)	290	1	105017
386	10.9	0.0	0.0	chr1	54442094	54442148	(194514274)	+	THE1D	LTR/ERVL-MaLR	327	381	(0)	105088
247	34.1	2.2	2.2	chr1	54442160	54442294	(194514128)	+	MIR3	SINE/MIR	20	154	(54)	105089
214	27.4	9.3	2.5	chr1	54442427	54442546	(194513876)	+	L2c	LINE/L2	2074	2202	(1217)	105090
580	24.9	14.8	2.8	chr1	54715147	54715633	(194240789)	+	L2b	LINE/L2	2808	3373	(2)	105732
2147	20.5	9.4	4.0	chr1	54975712	54976240	(193980182)	+	MLT1E2	LTR/ERVL-MaLR	64	624	(3)	106261
15819	10.2	2.2	1.3	chr1	55023171	55026144	(193930278)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	106387
521	33.1	4.1	1.1	chr1	55217694	55217974	(193738448)	C	UCON86	LINE/L2	(322)	360	71	106644
14	17.0	0.0	2.9	chr1	55217988	55218022	(193738400)	+	(TATTTT)n	Simple_repeat	1	35	(0)	106645
1083	31.7	6.0	4.6	chr1	55301895	55302480	(193653942)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	1	106816
420	31.3	2.2	0.7	chr1	55304084	55304218	(193652204)	+	MIR3	SINE/MIR	18	154	(54)	106820
217	28.3	5.2	7.2	chr1	56437243	56437478	(192518944)	+	L2c	LINE/L2	2932	3162	(225)	108817
457	24.1	8.3	0.9	chr1	57472033	57472185	(191484237)	C	MIRb	SINE/MIR	(93)	175	13	110882
3608	7.2	0.4	0.0	chr1	57472357	57472817	(191483605)	+	LTR2	LTR/ERV1	1	463	(0)	110883
459	28.0	3.8	12.4	chr1	57599981	57600302	(191356120)	+	L2b	LINE/L2	3078	3370	(5)	111144
442	20.4	5.5	5.0	chr1	57632616	57632796	(191323626)	+	HAL1	LINE/L1	2201	2382	(125)	111218
409	14.9	11.3	5.0	chr1	57966916	57967014	(190989408)	+	L1MB1	LINE/L1	6062	6167	(1)	111891
31	22.8	0.0	0.0	chr1	58250427	58250496	(190705926)	+	(GCAGCA)n	Simple_repeat	1	70	(0)	112475
743	16.7	4.3	2.2	chr1	58544895	58545032	(190411390)	C	AluJb	SINE/Alu	(169)	143	3	113059
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
305	27.4	2.9	4.7	chr1	59105833	59105939	(189850483)	+	L1ME4c	LINE/L1	345	449	(381)	114211
227	28.4	4.5	5.2	chr1	59106081	59106214	(189850208)	+	MIRc	SINE/MIR	11	143	(125)	114212
2426	22.6	7.6	0.9	chr1	59193510	59194036	(189762386)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	114406
303	34.7	10.5	4.4	chr1	62142499	62142748	(186813674)	C	L2c	LINE/L2	(0)	3387	3121	119581
290	31.0	12.8	3.9	chr1	62142793	62143124	(186813298)	C	L2c	LINE/L2	(452)	2967	2602	119581
738	25.2	6.7	1.6	chr1	62229067	62229287	(186727135)	+	MIR	SINE/MIR	27	248	(14)	119796
1222	14.3	0.0	0.0	chr1	62233022	62233196	(186723226)	C	AluSx	SINE/Alu	(1)	311	137	119803
234	31.6	5.9	2.8	chr1	62233208	62233436	(186722986)	+	L2c	LINE/L2	3047	3279	(96)	119804
405	33.0	0.9	0.0	chr1	62294173	62294284	(186662138)	+	Charlie20a	DNA/hAT-Charlie	693	805	(2)	119926
395	24.6	14.7	6.8	chr1	62403770	62403937	(186552485)	C	L2	LINE/L2	(1367)	2052	1861	120176
2071	8.6	5.0	0.0	chr1	62403938	62404204	(186552218)	+	AluSg	SINE/Alu	1	281	(29)	120177
2052	13.1	0.7	0.7	chr1	63771321	63771618	(185184804)	C	AluSz	SINE/Alu	(14)	298	1	122672
399	27.0	9.8	3.9	chr1	63771714	63771867	(185184555)	+	MIR3	SINE/MIR	45	208	(0)	122673
478	32.8	5.5	8.6	chr1	63924575	63924854	(185031568)	C	L2b	LINE/L2	(0)	3375	3105	122952
22	0.0	0.0	0.0	chr1	63924933	63924956	(185031466)	+	(T)n	Simple_repeat	1	24	(0)	122953
20910	8.9	1.4	2.8	chr1	64352279	64355315	(184601107)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	123729
326	30.1	10.7	8.3	chr1	64507765	64507908	(184448514)	+	MIRc	SINE/MIR	17	175	(93)	124017
2214	13.3	10.3	2.3	chr1	64507909	64508301	(184448121)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	124018
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
12	22.0	2.7	0.0	chr1	65148891	65148927	(183807495)	+	(CCGTACC)n	Simple_repeat	1	38	(0)	125213
23	23.6	1.1	5.6	chr1	65254442	65254529	(183701893)	+	(GCG)n	Simple_repeat	1	89	(0)	125433
440	27.9	3.6	2.2	chr1	65264372	65264509	(183691913)	+	L2b	LINE/L2	3258	3386	(1)	125459
1229	14.6	0.0	11.3	chr1	65363557	65363803	(183592619)	+	MER20	DNA/hAT-Charlie	1	219	(0)	125661
549	33.8	10.3	4.4	chr1	65970508	65970916	(182985506)	C	L2c	LINE/L2	(31)	3356	2921	126531
2294	6.9	1.8	0.0	chr1	66455806	66456130	(182500292)	C	AluY	SINE/Alu	(0)	311	1	127268
201	25.9	1.2	5.8	chr1	67601626	67601711	(181354711)	C	L2b	LINE/L2	(54)	3321	3240	129234
216	33.3	12.9	4.6	chr1	67731248	67731615	(181224807)	C	L2c	LINE/L2	(13)	3374	2972	129481
210	36.1	1.2	0.0	chr1	67731674	67731756	(181224666)	C	L2c	LINE/L2	(530)	2889	2806	129481
2870	21.3	4.6	2.6	chr1	67821122	67821733	(181134689)	+	MLT1E2	LTR/ERVL-MaLR	3	627	(0)	129638
13	13.1	2.7	5.3	chr1	68232359	68232395	(180724027)	+	(CTCC)n	Simple_repeat	1	38	(0)	130267
18	34.0	0.0	0.0	chr1	68232582	68232644	(180723778)	+	(CCTT)n	Simple_repeat	1	63	(0)	130268
371	30.4	18.1	1.9	chr1	76511078	76511345	(172445077)	+	L2c	LINE/L2	2668	2988	(431)	141554
268	35.4	2.9	5.7	chr1	76511459	76511651	(172444771)	+	L2c	LINE/L2	3159	3379	(8)	141554
733	30.8	3.8	4.4	chr1	81135296	81135611	(167820811)	+	LTR67B	LTR/ERVL	13	326	(294)	148047
471	23.5	10.2	0.0	chr1	81135830	81135961	(167820461)	+	LTR67B	LTR/ERVL	466	612	(8)	148047
416	32.0	0.8	5.3	chr1	81332965	81333132	(167623290)	+	MIR3	SINE/MIR	14	172	(36)	148292
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
314	23.6	8.2	1.1	chr1	81979351	81979440	(166976982)	C	MIRc	SINE/MIR	(30)	238	142	149201
4835	9.5	2.1	0.7	chr1	82034187	82034896	(166921526)	+	L1PREC2	LINE/L1	4582	5301	(845)	149274
813	24.6	3.9	2.1	chr1	82034905	82035167	(166921255)	+	MSTD	LTR/ERVL-MaLR	196	465	(0)	149275
366	22.1	7.0	3.3	chr1	82035169	82035318	(166921104)	C	L1MEd	LINE/L1	(5101)	2002	1847	149272
683	27.5	11.8	3.5	chr1	82806025	82806310	(166150112)	C	LTR16C	LTR/ERVL	(1)	488	176	150322
749	33.8	4.3	1.3	chr1	82928079	82928396	(166028026)	+	L3	LINE/CR1	3772	4099	(0)	150492
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
2149	24.3	10.9	1.3	chr1	84788825	84789528	(164166894)	C	LTR50	LTR/ERVL	(15)	780	1	153086
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
23	11.1	0.0	0.0	chr1	85576952	85576990	(163379432)	+	(ACCGCC)n	Simple_repeat	1	39	(0)	154399
16	18.3	3.8	3.6	chr1	85577104	85577156	(163379266)	+	G-rich	Low_complexity	1	55	(0)	154400
672	25.3	22.0	2.8	chr1	87225967	87226333	(161730089)	C	L2a	LINE/L2	(245)	3181	2715	156755
21	23.3	0.0	0.0	chr1	88683885	88683929	(160272493)	+	A-rich	Low_complexity	1	45	(0)	158815
231	37.4	1.2	0.0	chr1	89837051	89837133	(159119289)	C	L3	LINE/CR1	(1104)	2995	2912	160424
830	17.8	7.5	4.6	chr1	89837488	89837681	(159118741)	+	MIR	SINE/MIR	15	214	(48)	160425
251	31.8	9.2	2.0	chr1	89846361	89846511	(159109911)	C	MIRb	SINE/MIR	(81)	187	25	160434
723	10.9	12.2	0.0	chr1	89914763	89914863	(159041559)	C	AluJo	SINE/Alu	(197)	115	1	160536
225	23.3	7.7	1.6	chr1	89914973	89915016	(159041406)	+	L2c	LINE/L2	3286	3334	(53)	160537
51	1.9	3.6	0.0	chr1	89915017	89915071	(159041351)	+	(TG)n	Simple_repeat	1	57	(0)	160538
225	23.3	7.7	1.6	chr1	89915072	89915087	(159041335)	+	L2c	LINE/L2	3335	3350	(37)	160537
720	24.8	8.3	2.3	chr1	89939811	89940025	(159016397)	+	MIR	SINE/MIR	19	247	(15)	160576
2230	9.5	0.0	1.8	chr1	89941760	89942042	(159014380)	+	AluSz	SINE/Alu	35	312	(0)	160581
476	31.4	11.5	4.4	chr1	90974404	90975104	(157981318)	+	L2a	LINE/L2	2388	3157	(269)	162042
1809	20.0	9.0	6.8	chr1	91135858	91136367	(157820055)	+	MLT2B3	LTR/ERVL	1	518	(36)	162313
197	38.0	2.9	2.9	chr1	91929193	91929363	(157027059)	C	L2c	LINE/L2	(12)	3375	3205	163521
238	31.6	14.7	0.0	chr1	91929529	91929661	(157026761)	C	MIR3	SINE/MIR	(0)	208	53	163522
16	26.7	0.0	5.7	chr1	92961519	92961588	(155994834)	+	(CCCGG)n	Simple_repeat	1	70	(0)	165428
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
715	23.0	34.0	4.5	chr1	93594275	93594640	(155361782)	+	MLT1J	LTR/ERVL-MaLR	36	510	(2)	166540
215	29.0	7.2	13.1	chr1	93594689	93594910	(155361512)	C	L3b	LINE/CR1	(218)	5014	4807	166541
795	24.2	11.2	1.9	chr1	93693924	93694134	(155262288)	C	MIRb	SINE/MIR	(21)	247	15	166695
181	12.0	0.0	0.0	chr1	93694221	93694245	(155262177)	C	L3	LINE/CR1	(611)	3488	3464	166696
217	25.7	19.2	2.8	chr1	93815003	93815110	(155141312)	C	L2a	LINE/L2	(9)	3417	3288	166874
229	27.9	1.4	0.0	chr1	94100814	94100881	(154855541)	C	MER3	DNA/hAT-Charlie	(140)	69	1	167281
782	18.4	3.3	5.4	chr1	94120374	94120557	(154835865)	C	MER104	DNA/TcMar-Tc2	(1)	180	1	167318
17	15.9	4.8	0.0	chr1	95117298	95117339	(153839083)	+	(GCCGGA)n	Simple_repeat	1	44	(0)	168893
31	22.1	2.0	4.8	chr1	95234014	95234115	(153722307)	+	(GCCCC)n	Simple_repeat	1	104	(0)	169060
7044	18.9	7.5	11.5	chr1	95752553	95754760	(153201662)	+	MER52D	LTR/ERV1	10	2123	(0)	169769
2938	16.5	4.5	0.2	chr1	96048660	96049152	(152907270)	C	MLT2B2	LTR/ERVL	(0)	515	1	170147
1864	18.9	4.6	2.4	chr1	96065837	96066375	(152890047)	+	MLT2A2	LTR/ERVL	2	546	(8)	170163
15190	18.2	2.2	2.5	chr1	96066379	96070883	(152885539)	C	L1PB4	LINE/L1	(420)	7155	2634	170162
2065	19.5	12.7	2.7	chr1	100036738	100037248	(148919174)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	175848
1897	24.5	2.0	1.6	chr1	107276901	107277348	(141679074)	C	LTR16B2	LTR/ERVL	(12)	450	1	185222
1776	26.1	20.6	2.7	chr1	107875186	107876642	(141079780)	C	L2a	LINE/L2	(56)	3370	1581	186009
194	33.3	2.7	1.4	chr1	107877715	107877787	(141078635)	C	L2c	LINE/L2	(18)	3369	3296	186010
1885	27.7	10.8	8.1	chr1	107878051	107879260	(141077162)	C	L1MC4	LINE/L1	(15)	8027	6781	186011
12	13.9	6.2	0.0	chr1	109213804	109213835	(139742587)	+	(CTCCC)n	Simple_repeat	1	34	(0)	188239
2169	9.9	0.0	0.3	chr1	109241040	109241322	(139715100)	+	AluSx	SINE/Alu	22	303	(9)	188289
29	18.2	1.6	0.0	chr1	109484573	109484634	(139471788)	+	(TCCA)n	Simple_repeat	1	63	(0)	188669
283	20.9	10.7	4.3	chr1	109537815	109537939	(139418483)	C	MIRc	SINE/MIR	(61)	169	19	188743
16	27.0	0.0	5.8	chr1	110034688	110034756	(138921666)	+	(GCC)n	Simple_repeat	1	69	(0)	189456
475	26.7	5.9	9.0	chr1	110309102	110309336	(138647086)	C	MIRb	SINE/MIR	(18)	250	14	189896
14	25.8	0.0	2.3	chr1	110490298	110490341	(138466081)	+	(CTC)n	Simple_repeat	1	44	(0)	190245
581	29.1	9.0	0.9	chr1	110571118	110571332	(138385090)	C	MIRc	SINE/MIR	(10)	258	25	190395
273	30.6	2.2	0.0	chr1	111746850	111746957	(137209465)	+	MIRc	SINE/MIR	26	142	(126)	192006
412	26.3	1.4	4.9	chr1	111747010	111747153	(137209269)	C	MIRc	SINE/MIR	(123)	145	7	191998
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
897	22.7	24.7	1.3	chr1	113388619	113389011	(135567411)	+	LTR33	LTR/ERVL	1	515	(0)	194970
247	32.9	11.3	4.3	chr1	113389101	113389321	(135567101)	C	L2b	LINE/L2	(121)	3266	3018	194971
384	25.3	18.8	5.2	chr1	113759675	113759907	(135196515)	+	L2b	LINE/L2	3104	3375	(0)	195473
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
8008	13.0	5.8	0.6	chr1	114029930	114031524	(134924898)	+	HERVH-int	LTR/ERV1	3995	6016	(1697)	195966
222	34.5	5.2	1.8	chr1	115474268	115474435	(133481987)	+	MIRc	SINE/MIR	33	206	(62)	198241
852	31.1	1.1	0.4	chr1	115546318	115546582	(133409840)	C	MER102c	DNA/hAT-Charlie	(64)	267	1	198345
223	17.5	17.1	0.0	chr1	115898106	115898168	(133058254)	C	MIRc	SINE/MIR	(180)	88	13	198870
17	21.0	2.3	0.0	chr1	115898443	115898486	(133057936)	+	(ATGT)n	Simple_repeat	1	45	(0)	198871
5106	12.9	2.1	1.7	chr1	115898487	115898552	(133057870)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(0)	1068	1005	198872
2202	10.3	0.3	2.9	chr1	115898553	115898862	(133057560)	C	AluSx	SINE/Alu	(10)	302	1	198873
433	32.3	16.9	2.0	chr1	115969778	115970118	(132986304)	+	L2	LINE/L2	2463	2864	(555)	198996
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
407	30.3	5.3	4.2	chr1	118185498	118185738	(130770684)	C	L3	LINE/CR1	(71)	4028	3785	202420
18	12.4	0.0	2.7	chr1	118979624	118979661	(129976761)	+	(TGTTT)n	Simple_repeat	1	36	(0)	203441
14	17.5	0.0	0.0	chr1	118979821	118979852	(129976570)	+	(CGAGG)n	Simple_repeat	1	32	(0)	203442
42	0.0	0.0	0.0	chr1	119303395	119303430	(129652992)	+	(AC)n	Simple_repeat	1	36	(0)	203929
350	32.6	5.2	0.6	chr1	119638848	119639029	(129317393)	+	MIRb	SINE/MIR	5	195	(73)	204324
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
13	19.2	6.1	1.9	chr1	145859802	145859850	(103096572)	+	(GGCTCG)n	Simple_repeat	1	52	(0)	211658
13	14.0	0.0	5.7	chr1	145917065	145917099	(103039323)	+	A-rich	Low_complexity	1	35	(0)	211749
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
2408	9.7	0.3	0.0	chr1	149939648	149939957	(99016465)	+	AluSx1	SINE/Alu	1	311	(1)	218016
2374	6.8	0.0	0.7	chr1	150365598	150365891	(98590531)	C	AluSq2	SINE/Alu	(21)	292	1	218879
1303	23.8	5.3	7.5	chr1	150730113	150730669	(98225753)	C	MER39	LTR/ERV1	(0)	707	1	219707
1629	16.8	9.2	1.6	chr1	150730670	150731036	(98225386)	+	Charlie4a	DNA/hAT-Charlie	86	483	(25)	219708
12	20.4	2.4	2.4	chr1	151071222	151071262	(97885160)	+	G-rich	Low_complexity	1	42	(0)	220420
723	17.3	0.0	0.8	chr1	151166600	151166732	(97789690)	C	FLAM_A	SINE/Alu	(10)	132	1	220639
210	21.8	0.0	6.8	chr1	151370910	151370968	(97585454)	+	MIR3	SINE/MIR	16	70	(138)	221066
260	34.3	8.7	3.5	chr1	151594036	151594114	(97362308)	+	MIR3	SINE/MIR	52	131	(77)	221555
51	0.0	0.0	0.0	chr1	151594115	151594160	(97362262)	+	(CAAAA)n	Simple_repeat	1	46	(0)	221556
260	34.3	8.7	3.5	chr1	151594161	151594222	(97362200)	+	MIR3	SINE/MIR	132	201	(7)	221555
13	20.8	2.1	4.1	chr1	151724326	151724373	(97232049)	+	(AGTGTTT)n	Simple_repeat	1	49	(0)	221796
13	12.8	5.6	2.6	chr1	151729106	151729141	(97227281)	+	(AATGG)n	Simple_repeat	1	38	(0)	221807
18	8.6	5.1	2.4	chr1	151838410	151838451	(97117971)	+	(GCGGC)n	Simple_repeat	1	43	(0)	221960
230	18.2	0.0	0.0	chr1	153568410	153568453	(95387969)	+	MIR3	SINE/MIR	67	110	(98)	224297
674	21.1	1.3	11.5	chr1	153600001	153600186	(95356236)	C	Charlie2b	DNA/hAT-Charlie	(32)	2750	2568	224375
748	17.5	1.3	3.8	chr1	153633221	153633380	(95323042)	+	AluJb	SINE/Alu	156	311	(1)	224439
668	1.4	0.0	0.0	chr1	153671250	153671323	(95285099)	+	tRNA-Met-i	tRNA	1	74	(1)	224506
13	14.3	2.3	6.7	chr1	153680276	153680319	(95276103)	+	(CCGCCC)n	Simple_repeat	1	45	(0)	224531
2249	8.3	0.3	0.7	chr1	153729586	153729885	(95226537)	+	AluSc	SINE/Alu	1	299	(10)	224672
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
15	28.9	2.7	2.6	chr1	154220842	154220916	(94735506)	+	G-rich	Low_complexity	1	77	(0)	225710
209	17.0	0.0	7.8	chr1	154431009	154431059	(94525363)	+	MamTip2	DNA/hAT-Tip100	187	233	(72)	226166
3459	16.1	6.6	0.6	chr1	154431379	154432021	(94524401)	C	MER44D	DNA/TcMar-Tigger	(21)	684	1	226167
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
1446	12.3	2.9	2.1	chr1	154975848	154976087	(93980335)	+	L1PREC2	LINE/L1	5908	6149	(11)	227130
312	33.6	0.8	0.8	chr1	154976175	154976291	(93980131)	+	L3	LINE/CR1	3949	4065	(34)	227131
17	32.0	3.0	2.9	chr1	155002310	155002409	(93954013)	+	G-rich	Low_complexity	1	103	(0)	227187
13	24.6	0.0	4.3	chr1	155002749	155002795	(93953627)	+	GA-rich	Low_complexity	1	47	(0)	227188
26	22.9	0.0	0.0	chr1	155012402	155012462	(93943960)	+	(CTG)n	Simple_repeat	1	61	(0)	227194
22	27.7	4.9	0.0	chr1	155126503	155126584	(93829838)	+	(CA)n	Simple_repeat	1	86	(0)	227410
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
12	18.3	0.0	3.0	chr1	155255459	155255491	(93700931)	+	G-rich	Low_complexity	1	33	(0)	227628
15	28.1	2.8	2.7	chr1	156075768	156075839	(92880583)	+	A-rich	Low_complexity	1	74	(0)	229429
22	16.2	2.0	2.0	chr1	156076889	156076938	(92879484)	+	GA-rich	Low_complexity	1	51	(0)	229430
594	28.8	3.0	2.5	chr1	156106986	156107188	(92849234)	+	MIRc	SINE/MIR	20	223	(45)	229497
459	27.3	13.3	0.7	chr1	156282076	156282226	(92674196)	C	MIR3	SINE/MIR	(17)	191	19	229844
420	19.5	20.0	1.5	chr1	156379496	156379625	(92576797)	C	LTR85a	LTR/Gypsy?	(5)	697	538	230054
343	27.6	13.9	1.3	chr1	156414187	156414350	(92542072)	+	MIR3	SINE/MIR	3	185	(23)	230110
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
16	4.5	0.0	0.0	chr1	156429591	156429613	(92526809)	+	(CAC)n	Simple_repeat	1	23	(0)	230121
2494	6.0	0.0	0.0	chr1	156505620	156505917	(92450505)	+	AluSx4	SINE/Alu	2	299	(11)	230245
20	21.6	5.5	2.6	chr1	156591735	156591867	(92364555)	+	G-rich	Low_complexity	1	136	(0)	230402
30	25.3	3.2	0.0	chr1	156652289	156652382	(92304040)	+	GA-rich	Low_complexity	1	97	(0)	230526
266	28.9	0.0	1.3	chr1	156848218	156848294	(92108128)	C	L3	LINE/CR1	(641)	3458	3383	230867
12	18.8	2.6	2.6	chr1	156920241	156920278	(92036144)	+	(CCCCAGC)n	Simple_repeat	1	39	(0)	230987
211	30.8	4.9	1.3	chr1	157158945	157159023	(91797399)	+	MIR	SINE/MIR	181	262	(0)	231347
607	29.2	1.3	0.7	chr1	157171880	157172034	(91784388)	C	MIRc	SINE/MIR	(111)	157	2	231373
381	27.7	15.7	0.6	chr1	157172211	157172388	(91784034)	C	MIRb	SINE/MIR	(27)	241	32	231374
563	27.5	2.7	0.7	chr1	157196800	157196942	(91759480)	C	MIRc	SINE/MIR	(102)	166	21	231414
368	28.2	15.7	0.6	chr1	157197165	157197342	(91759080)	C	MIRb	SINE/MIR	(27)	241	32	231415
1629	14.0	3.7	0.0	chr1	157976100	157976334	(90980088)	+	AluSz	SINE/Alu	1	244	(68)	232447
525	20.6	1.0	0.0	chr1	157976439	157976540	(90979882)	+	MLT1E3	LTR/ERVL-MaLR	522	624	(0)	232448
491	30.2	8.7	1.7	chr1	158022342	158022513	(90933909)	C	MIR3	SINE/MIR	(14)	194	10	232530
2501	7.2	0.0	0.0	chr1	158125360	158125665	(90830757)	C	AluSc5	SINE/Alu	(0)	309	4	232713
8103	18.9	9.2	3.4	chr1	158212250	158214235	(90742187)	+	MER52D	LTR/ERV1	10	2123	(0)	232840
647	13.6	0.0	1.0	chr1	158999860	158999963	(89956459)	+	MSTB	LTR/ERVL-MaLR	32	134	(292)	233759
1936	22.2	4.7	3.2	chr1	159006130	159006739	(89949683)	C	LTR6A	LTR/ERV1	(0)	564	1	233776
16	10.4	3.2	0.0	chr1	159006819	159006849	(89949573)	+	(CAAA)n	Simple_repeat	1	32	(0)	233777
273	34.8	6.6	0.0	chr1	159895680	159895820	(89060602)	+	Plat_L3	LINE/CR1	3238	3388	(198)	234912
182	28.1	10.3	5.9	chr1	159896020	159896121	(89060301)	+	MIR1_Amn	SINE/MIR	102	208	(22)	234913
294	28.1	10.7	1.8	chr1	160665875	160666044	(88290378)	C	L2c	LINE/L2	(243)	3144	2958	236094
1010	11.5	0.7	1.9	chr1	161021828	161021983	(87934439)	+	AluSx3	SINE/Alu	158	311	(0)	236709
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
14	9.3	0.0	0.0	chr1	161439874	161439896	(87516526)	+	(GGT)n	Simple_repeat	1	23	(0)	237535
621	5.4	0.0	0.0	chr1	161440169	161440242	(87516180)	C	tRNA-Gly-GGA	tRNA	(1)	74	1	237536
202	43.6	0.0	0.0	chr1	163885893	163885993	(85070429)	+	MIR1_Amn	SINE/MIR	9	109	(121)	241392
298	32.8	12.9	1.6	chr1	165564534	165564725	(83391697)	C	MIRb	SINE/MIR	(35)	233	17	243865
243	22.6	6.7	2.3	chr1	165565026	165565111	(83391311)	+	MIR3	SINE/MIR	14	103	(165)	243866
452	9.3	0.0	0.0	chr1	165718476	165718529	(83237893)	C	AluYg6	SINE/Alu	(13)	298	245	244155
2756	7.1	0.0	0.0	chr1	165719784	165720094	(83236328)	+	AluY	SINE/Alu	1	311	(0)	244160
1745	18.6	6.6	0.3	chr1	166056823	166057161	(82899261)	+	MLT1A0	LTR/ERVL-MaLR	1	362	(3)	244746
751	25.2	10.1	0.5	chr1	166432982	166433212	(82523210)	+	MIRb	SINE/MIR	3	268	(0)	245259
369	32.2	0.8	0.0	chr1	166764860	166764977	(82191445)	C	L2a	LINE/L2	(1000)	2419	2301	245685
260	32.4	8.2	5.4	chr1	166764978	166765476	(82190946)	C	L2-3_Crp	LINE/L2	(1007)	1089	576	245687
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
339	24.2	18.5	0.0	chr1	166925379	166925510	(82030912)	+	MIR3	SINE/MIR	41	202	(6)	245888
360	29.9	17.2	0.7	chr1	166925609	166925763	(82030659)	+	MIR3	SINE/MIR	20	205	(3)	245889
2170	22.1	10.2	1.2	chr1	167367928	167368532	(81587890)	C	L1MC4	LINE/L1	(142)	7900	7235	246601
453	22.1	15.8	0.6	chr1	167448190	167448346	(81508076)	C	MIR	SINE/MIR	(68)	200	2	246702
563	24.9	11.4	3.2	chr1	167713974	167714170	(81242252)	+	MIR	SINE/MIR	40	255	(13)	247180
188	28.2	1.3	4.9	chr1	168137392	168137473	(80818949)	C	L2b	LINE/L2	(1)	3374	3296	247861
2647	21.7	2.7	5.6	chr1	168977444	168978088	(79978334)	+	MLT1E2	LTR/ERVL-MaLR	1	626	(1)	249242
1224	29.4	5.6	0.9	chr1	169325026	169325465	(79630957)	C	LTR16B2	LTR/ERVL	(0)	462	1	249787
361	33.0	10.5	4.7	chr1	169461298	169461593	(79494829)	+	L2c	LINE/L2	3023	3337	(50)	249964
4320	26.5	8.8	3.5	chr1	170596819	170598490	(78357932)	C	L1M4a1	LINE/L1	(804)	1775	6	251519
433	31.1	6.2	0.5	chr1	172680831	172681027	(76275395)	+	LTR33A_	LTR/ERVL	143	351	(180)	254567
296	10.9	1.8	1.8	chr1	172681104	172681159	(76275263)	+	LTR33A_	LTR/ERVL	476	531	(0)	254567
14	23.4	2.1	2.1	chr1	174159974	174160020	(74796402)	+	(TGC)n	Simple_repeat	1	48	(0)	256811
11204	22.6	5.5	3.5	chr1	174527506	174530767	(74425655)	C	L1MA4A	LINE/L1	(3368)	4197	755	257342
53	0.0	0.0	0.0	chr1	174530791	174530838	(74425584)	+	(ATAC)n	Simple_repeat	1	48	(0)	257345
14	26.3	1.9	1.9	chr1	175193088	175193140	(73763282)	+	(CGCCCCC)n	Simple_repeat	1	54	(0)	258356
668	24.8	3.9	1.5	chr1	175220986	175221186	(73735236)	+	MamGypLTR1a	LTR/Gypsy	569	774	(10)	258400
181	31.7	0.0	4.8	chr1	177791909	177791971	(71164451)	+	MIR3	SINE/MIR	12	71	(137)	262094
16	19.1	6.2	0.0	chr1	178489445	178489505	(70466917)	+	GA-rich	Low_complexity	1	64	(0)	263157
264	31.7	0.7	8.4	chr1	178489581	178489735	(70466687)	C	MIRb	SINE/MIR	(9)	259	117	263158
585	30.4	8.4	8.8	chr1	178528918	178529385	(70427037)	+	MLT1O	LTR/ERVL-MaLR	76	541	(1)	263214
406	28.8	8.0	4.8	chr1	178529392	178529559	(70426863)	C	MIR3	SINE/MIR	(30)	178	5	263215
403	26.0	4.6	0.0	chr1	178529653	178529756	(70426666)	+	MIR	SINE/MIR	94	202	(60)	263216
13	11.4	0.0	6.1	chr1	180237078	180237110	(68719312)	+	(TTCTCC)n	Simple_repeat	1	33	(0)	266090
214	37.9	3.5	0.1	chr1	180253547	180253671	(68702751)	+	MIRc	SINE/MIR	37	167	(101)	266108
15	18.7	0.0	4.8	chr1	182450312	182450353	(66506069)	+	(TTCTCC)n	Simple_repeat	1	42	(0)	269504
285	36.7	10.8	4.3	chr1	184757169	184757408	(64199014)	+	L2b	LINE/L2	3036	3304	(71)	273162
1011	25.6	13.6	3.9	chr1	184757409	184757819	(64198603)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	273165
430	23.1	9.9	5.7	chr1	185049897	185050089	(63906333)	C	LTR50	LTR/ERVL	(589)	206	5	273643
184	22.6	10.2	0.0	chr1	185666635	185666687	(63289735)	C	L2b	LINE/L2	(9)	3366	3308	274604
276	23.9	0.0	0.0	chr1	185666715	185666785	(63289637)	+	MER5A1	DNA/hAT-Charlie	56	126	(40)	274605
13	18.3	0.0	3.0	chr1	185734404	185734436	(63221986)	+	(GGC)n	Simple_repeat	1	33	(0)	274707
5319	15.7	1.0	0.3	chr1	188747933	188748796	(60207626)	+	MSTA-int	LTR/ERVL-MaLR	1	870	(761)	278699
2100	20.2	4.2	8.8	chr1	188749316	188749962	(60206460)	+	LTR6A	LTR/ERV1	1	564	(0)	278700
7349	4.1	1.2	0.0	chr1	196002029	196002913	(52953509)	C	MER11D	LTR/ERVK	(1)	896	1	288112
1915	22.2	7.6	7.6	chr1	196002914	196003173	(52953249)	+	MLT2A2	LTR/ERVL	292	552	(2)	288111
594	28.6	11.1	0.9	chr1	196878354	196878579	(52077843)	+	MIRb	SINE/MIR	17	268	(0)	289194
3349	19.9	14.5	1.6	chr1	197787661	197788710	(51167712)	C	L1M3e	LINE/L1	(5822)	1208	1	290354
860	19.4	3.2	0.0	chr1	199689826	199690005	(49266417)	C	MER5A	DNA/hAT-Charlie	(0)	189	4	292850
216	28.7	22.7	0.7	chr1	200510723	200510873	(48445549)	C	MIRb	SINE/MIR	(25)	243	50	294412
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
1169	28.4	11.2	3.5	chr1	201392243	201393105	(47563317)	C	L2a	LINE/L2	(4)	3422	2475	295935
13	14.7	0.0	3.1	chr1	201503764	201503795	(47452627)	+	(CCCCT)n	Simple_repeat	1	32	(0)	296143
712	29.4	7.6	0.5	chr1	201504143	201504372	(47452050)	+	MIRb	SINE/MIR	6	258	(4)	296144
12	13.7	5.3	8.3	chr1	201512172	201512228	(47444194)	+	G-rich	Low_complexity	1	60	(0)	296159
11	19.0	4.3	4.2	chr1	201894793	201894838	(47061584)	+	(CAGGTG)n	Simple_repeat	1	48	(0)	296795
18	25.2	4.2	1.3	chr1	201894967	201895038	(47061384)	+	GA-rich	Low_complexity	1	75	(0)	296796
15	21.8	5.3	5.0	chr1	202167902	202167977	(46788445)	+	(CTGC)n	Simple_repeat	1	80	(0)	297417
214	35.7	5.3	0.0	chr1	202682495	202682637	(46273785)	C	L2c	LINE/L2	(232)	3155	3005	298306
197	38.9	6.7	0.0	chr1	202712173	202712339	(46244083)	C	MamSINE1	SINE/tRNA-RTE	(36)	254	76	298351
32	10.5	0.0	0.0	chr1	202835973	202836023	(46120399)	+	(CCCCT)n	Simple_repeat	1	51	(0)	298582
206	11.4	12.0	2.2	chr1	202836070	202836114	(46120308)	C	L2b	LINE/L2	(2)	3373	3324	298583
202	27.1	6.7	4.1	chr1	202836122	202836194	(46120228)	+	L2b	LINE/L2	3114	3188	(187)	298584
545	32.6	6.0	0.0	chr1	202836201	202836387	(46120035)	+	MIRb	SINE/MIR	14	212	(56)	298585
287	21.4	17.6	1.1	chr1	202837001	202837090	(46119332)	+	MIRc	SINE/MIR	130	237	(31)	298586
407	31.6	12.0	7.7	chr1	202837170	202837574	(46118848)	+	L2b	LINE/L2	2950	3374	(1)	298587
2358	10.4	0.3	0.0	chr1	202837578	202837884	(46118538)	+	AluSg	SINE/Alu	2	309	(1)	298588
251	25.0	9.6	5.5	chr1	203049078	203049187	(45907235)	C	MIRb	SINE/MIR	(35)	233	119	298970
2449	8.6	0.0	1.9	chr1	203549632	203549946	(45406476)	C	AluSq	SINE/Alu	(4)	309	1	299811
203	35.9	13.6	7.9	chr1	203577794	203578224	(45378198)	C	L2a	LINE/L2	(142)	3245	2770	299871
693	35.2	3.6	4.8	chr1	203578230	203578900	(45377522)	C	L2a	LINE/L2	(832)	2587	1925	299871
200	27.6	17.8	1.9	chr1	204305303	204305463	(44650959)	+	MIR3	SINE/MIR	7	184	(84)	301312
237	31.7	2.9	0.0	chr1	204305468	204305575	(44650847)	+	L2c	LINE/L2	3254	3367	(8)	301313
12	7.8	7.4	0.0	chr1	205352337	205352363	(43604059)	+	(CTCTC)n	Simple_repeat	1	29	(0)	303270
21	4.0	0.0	0.0	chr1	205352377	205352402	(43604020)	+	(AC)n	Simple_repeat	1	26	(0)	303271
30	35.2	0.0	0.0	chr1	205456728	205456827	(43499595)	+	(CA)n	Simple_repeat	1	100	(0)	303462
337	27.6	7.1	0.0	chr1	205458879	205458983	(43497439)	C	MIRb	SINE/MIR	(57)	211	99	303465
354	26.7	3.1	0.0	chr1	205459299	205459390	(43497032)	+	MIRb	SINE/MIR	99	197	(71)	303466
13	12.5	0.0	0.0	chr1	205671099	205671124	(43285298)	+	(CTCCC)n	Simple_repeat	1	26	(0)	303879
365	28.6	5.7	1.9	chr1	205671433	205671564	(43284858)	+	MIRb	SINE/MIR	1	145	(123)	303880
216	32.8	0.0	0.0	chr1	206646540	206646600	(42309822)	+	L3	LINE/CR1	4038	4098	(1)	305456
226	26.3	5.0	7.4	chr1	206646737	206646857	(42309565)	+	MIRc	SINE/MIR	17	137	(125)	305464
322	31.7	13.5	1.2	chr1	207496744	207496912	(41459510)	+	MIRb	SINE/MIR	34	226	(42)	306728
15	18.8	2.3	2.2	chr1	208115885	208115928	(40840494)	+	A-rich	Low_complexity	1	45	(0)	307626
529	21.2	10.8	7.1	chr1	208202280	208202374	(40754048)	+	L2a	LINE/L2	3328	3426	(0)	307766
463	22.2	20.4	3.4	chr1	208202369	208202517	(40753905)	C	MIRb	SINE/MIR	(63)	205	25	307768
250	30.2	0.0	0.0	chr1	208202534	208202596	(40753826)	+	Plat_L3	LINE/CR1	3512	3574	(12)	307769
361	33.3	9.8	3.9	chr1	209314064	209314572	(39641850)	C	L2	LINE/L2	(1159)	2260	1719	309456
242	31.0	4.1	1.4	chr1	209314776	209314847	(39641575)	C	LTR79	LTR/ERVL	(385)	142	69	309457
2455	15.0	4.2	0.0	chr1	209497683	209498096	(39458326)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	309739
271	29.8	13.8	1.2	chr1	209624703	209624872	(39331550)	+	L2c	LINE/L2	3219	3425	(1)	309942
21	8.8	0.0	2.6	chr1	209937687	209937724	(39018698)	+	(CAAAA)n	Simple_repeat	1	38	(0)	310410
25	10.7	3.9	1.9	chr1	209937987	209938038	(39018384)	+	(GGTGG)n	Simple_repeat	1	54	(0)	310411
552	31.1	11.7	1.7	chr1	210221984	210222222	(38734200)	+	MIRb	SINE/MIR	3	268	(0)	310810
648	32.8	10.7	3.0	chr1	212496154	212496819	(36459603)	+	L2b	LINE/L2	2472	3208	(218)	314620
14	17.1	2.4	2.4	chr1	212858391	212858431	(36097991)	+	G-rich	Low_complexity	1	42	(0)	315328
12	27.1	2.3	0.0	chr1	212916960	212917003	(36039419)	+	(ACCCT)n	Simple_repeat	1	45	(0)	315426
928	18.6	6.5	0.6	chr1	212977708	212977880	(35978542)	C	MER5A	DNA/hAT-Charlie	(5)	184	1	315533
15	11.6	0.0	3.3	chr1	213051371	213051400	(35905022)	+	(GGC)n	Simple_repeat	1	30	(0)	315638
2510	10.4	0.0	0.0	chr1	213548381	213548687	(35407735)	+	AluSc	SINE/Alu	1	307	(2)	316411
966	23.4	9.2	8.4	chr1	213548688	213548885	(35407537)	+	L1ME3D	LINE/L1	6005	6234	(8)	316410
14	23.4	2.4	0.0	chr1	214282129	214282169	(34674253)	+	(TATG)n	Simple_repeat	1	42	(0)	317488
343	25.3	5.4	7.1	chr1	214282189	214282353	(34674069)	C	MIR3	SINE/MIR	(0)	230	54	317489
5332	20.0	7.6	2.6	chr1	214340071	214342357	(34614065)	C	MER21-int	LTR/ERVL	(69)	4122	1722	317562
321	29.0	16.6	1.1	chr1	219812295	219812533	(29143889)	C	L2c	LINE/L2	(54)	3333	3058	325186
251	28.3	5.0	5.8	chr1	219812516	219812635	(29143787)	C	MIRb	SINE/MIR	(90)	178	60	325187
17	4.9	0.0	0.0	chr1	220093909	220093929	(28862493)	+	(AT)n	Simple_repeat	1	21	(0)	325674
12	19.3	0.0	5.1	chr1	220094064	220094102	(28862320)	+	(CCGCC)n	Simple_repeat	1	39	(0)	325675
740	29.7	4.8	1.9	chr1	220366114	220366511	(28589911)	C	L2a	LINE/L2	(142)	3284	2872	326112
12	19.1	2.6	2.6	chr1	220710385	220710422	(28246000)	+	G-rich	Low_complexity	1	39	(0)	326628
1789	15.7	0.7	1.4	chr1	220710677	220710956	(28245466)	+	AluJr	SINE/Alu	5	282	(30)	326629
16	35.8	0.0	0.0	chr1	220884513	220884580	(28071842)	+	(AGC)n	Simple_repeat	1	68	(0)	326866
14	8.1	3.9	0.0	chr1	221742866	221742891	(27213531)	+	(CGCC)n	Simple_repeat	1	27	(0)	328101
1507	26.9	9.9	3.1	chr1	221780219	221780728	(27175694)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	328175
20632	9.6	1.3	1.3	chr1	221966357	221969342	(26987080)	+	HERVH-int	LTR/ERV1	1	2987	(4726)	328444
20259	9.2	1.2	4.0	chr1	221975432	221978506	(26977916)	C	HERVH-int	LTR/ERV1	(4726)	2987	1	328447
21	4.0	0.0	0.0	chr1	223090356	223090381	(25866041)	+	(TG)n	Simple_repeat	1	26	(0)	330171
1929	13.5	0.7	2.4	chr1	223090382	223090669	(25865753)	C	AluJr	SINE/Alu	(29)	283	1	330172
364	29.2	10.9	4.4	chr1	223492306	223492509	(25463913)	C	MIRb	SINE/MIR	(9)	259	41	330772
485	28.1	9.1	1.2	chr1	223702823	223703074	(25253348)	C	L2b	LINE/L2	(1201)	2218	1945	331057
12	0.0	9.1	0.0	chr1	223837610	223837631	(25118791)	+	(TAAA)n	Simple_repeat	1	24	(0)	331301
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
499	26.3	3.9	2.8	chr1	224016727	224016902	(24939520)	C	LTR67B	LTR/ERVL	(424)	196	19	331635
35	2.5	2.4	0.0	chr1	224204729	224204769	(24751653)	+	(CAATATATTC)n	Simple_repeat	1	42	(0)	332037
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
1172	13.9	0.6	1.7	chr1	224593141	224593320	(24363102)	C	AluJb	SINE/Alu	(0)	312	135	332837
274	26.9	3.1	4.1	chr1	224593434	224593530	(24362892)	C	MIRc	SINE/MIR	(143)	125	30	332838
1604	16.7	4.2	0.7	chr1	224880591	224880892	(24075530)	+	MER61A	LTR/ERV1	1	313	(28)	333306
660	14.7	12.8	0.3	chr1	224880902	224881058	(24075364)	C	LTR54B	LTR/ERV1	(83)	427	212	333305
741	27.2	10.2	6.2	chr1	224884251	224884559	(24071863)	C	LTR40A1	LTR/ERVL	(107)	477	155	333316
430	20.1	10.7	11.7	chr1	224884631	224884810	(24071612)	C	LTR40A1	LTR/ERVL	(386)	198	21	333316
255	30.2	10.5	0.0	chr1	225474923	225475041	(23481381)	+	MIR	SINE/MIR	27	159	(103)	334028
307	23.1	21.4	9.0	chr1	225763625	225763730	(23192692)	C	MIRc	SINE/MIR	(32)	236	107	334544
1651	28.0	11.4	1.2	chr1	226104599	226105289	(22851133)	+	L2a	LINE/L2	1513	2283	(1136)	335221
201	30.4	8.0	1.1	chr1	226125759	226125851	(22830571)	C	L2c	LINE/L2	(74)	3313	3214	335252
469	28.3	3.6	9.8	chr1	226474363	226474499	(22481923)	+	Charlie8	DNA/hAT-Charlie	82	220	(2208)	335975
489	22.8	31.1	4.8	chr1	227322430	227322648	(21633774)	C	LTR33A_	LTR/ERVL	(56)	475	195	337287
732	26.8	3.1	5.0	chr1	227356491	227356652	(21599770)	C	LTR16E2	LTR/ERVL	(34)	534	373	337367
276	24.6	1.4	1.4	chr1	227356926	227356995	(21599427)	C	LTR16E2	LTR/ERVL	(496)	72	3	337367
4847	25.5	12.5	3.4	chr1	228236056	228237257	(20719165)	C	L1MEf	LINE/L1	(4826)	1814	489	338479
40	0.0	0.0	0.0	chr1	228406869	228406905	(20549517)	+	(T)n	Simple_repeat	1	37	(0)	338659
19	31.2	4.0	1.0	chr1	228407064	228407163	(20549259)	+	G-rich	Low_complexity	1	104	(0)	338660
417	27.6	7.3	0.8	chr1	228446836	228446963	(20509459)	C	L2a	LINE/L2	(9)	3417	3281	338726
1702	16.4	0.3	8.8	chr1	228447202	228447399	(20509023)	C	L1M3	LINE/L1	(705)	5607	5410	338727
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
399	23.7	2.5	1.7	chr1	228896107	228896226	(20060196)	+	MLT1B	LTR/ERVL-MaLR	1	121	(253)	339366
609	18.9	3.6	0.0	chr1	228896225	228896330	(20060092)	+	MLT1B	LTR/ERVL-MaLR	279	388	(2)	339366
233	28.9	7.2	4.3	chr1	228896350	228896443	(20059979)	C	MIRc	SINE/MIR	(117)	151	55	339367
30	0.0	3.1	0.0	chr1	228896487	228896518	(20059904)	+	(TTTTGT)n	Simple_repeat	1	33	(0)	339368
2161	9.3	1.8	0.4	chr1	228896519	228896796	(20059626)	C	AluSx1	SINE/Alu	(30)	282	1	339369
436	32.8	12.1	7.7	chr1	229098700	229099356	(19857066)	C	LTR85c	LTR/Gypsy?	(1)	822	127	339682
1916	15.8	0.0	0.7	chr1	229099357	229099653	(19856769)	+	AluJo	SINE/Alu	1	295	(17)	339683
307	28.3	8.1	1.2	chr1	230735769	230735929	(18220493)	+	LTR33	LTR/ERVL	308	480	(35)	342330
238	24.4	10.9	7.5	chr1	230745341	230745436	(18210986)	C	MIR1_Amn	SINE/MIR	(60)	170	64	342346
28	0.0	0.0	0.0	chr1	230753841	230753867	(18202555)	+	(CCTC)n	Simple_repeat	1	27	(0)	342358
295	25.6	3.2	4.0	chr1	231666875	231667000	(17289422)	+	LTR90B	LTR	662	786	(10)	343884
2832	15.1	2.3	0.0	chr1	232571562	232571977	(16384445)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	345106
366	21.8	4.4	0.0	chr1	232764970	232765056	(16191366)	+	UCON17	Unknown	180	270	(168)	345393
555	35.3	9.8	3.5	chr1	233126790	233127580	(15828842)	+	L2c	LINE/L2	2440	3300	(87)	345912
12	18.2	2.4	4.8	chr1	233289555	233289595	(15666827)	+	(CAGG)n	Simple_repeat	1	42	(0)	346152
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
15	27.6	0.0	0.0	chr1	234611146	234611184	(14345238)	+	GA-rich	Low_complexity	1	39	(0)	348169
193	27.7	0.0	4.4	chr1	235090223	235090290	(13866132)	C	L3	LINE/CR1	(1684)	2415	2351	349009
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
79	3.8	0.0	0.0	chr1	236169173	236169255	(12787167)	+	(TGCAGG)n	Simple_repeat	1	83	(0)	351131
1860	12.3	9.3	0.3	chr1	236398113	236398396	(12558026)	C	AluSz	SINE/Alu	(0)	312	1	351544
447	32.2	7.2	7.1	chr1	236398397	236398972	(12557450)	+	L2b	LINE/L2	2802	3374	(1)	351543
1910	11.2	7.1	0.4	chr1	237854311	237854587	(11101835)	C	AluSz	SINE/Alu	(15)	297	1	353872
1652	22.7	3.3	2.3	chr1	239262531	239262918	(9693504)	C	MLT1E1A	LTR/ERVL-MaLR	(16)	664	273	355843
534	22.3	2.8	0.0	chr1	239262971	239263073	(9693349)	C	MLT1E1A	LTR/ERVL-MaLR	(543)	110	5	355843
23	12.3	2.2	2.1	chr1	239386589	239386634	(9569788)	+	GA-rich	Low_complexity	1	47	(0)	356035
322	37.7	6.9	2.8	chr1	239888645	239888824	(9067598)	C	MamRTE1	LINE/RTE-BovB	(1216)	2596	2409	356815
4113	13.4	8.0	0.3	chr1	239888983	239889654	(9066768)	C	LTR9A1	LTR/ERV1	(0)	728	1	356816
1552	22.7	1.5	1.4	chr1	239951941	239952486	(9003936)	+	L1M4	LINE/L1	4938	5481	(703)	356910
2324	10.5	0.0	0.0	chr1	240540565	240540860	(8415562)	C	AluSc	SINE/Alu	(13)	296	1	357790
495	30.2	5.1	6.3	chr1	242093411	242093647	(6862775)	C	MIRb	SINE/MIR	(31)	237	4	360459
1328	22.9	9.4	8.4	chr1	242385828	242386290	(6570132)	C	MLT1B	LTR/ERVL-MaLR	(0)	467	1	360912
1088	21.8	7.5	3.0	chr1	245613797	245614127	(3342295)	C	L1ME1	LINE/L1	(1)	6178	5832	366322
2442	9.4	0.0	1.3	chr1	245614174	245614472	(3341950)	C	AluSg4	SINE/Alu	(15)	295	1	366323
700	20.4	0.0	0.0	chr1	246159853	246159965	(2796457)	C	FLAM_A	SINE/Alu	(28)	114	2	367039
388	32.2	3.3	2.0	chr1	246159969	246160117	(2796305)	C	MIRb	SINE/MIR	(110)	158	8	367040
14499	11.1	2.4	1.1	chr1	247286546	247289592	(1666830)	+	HERVH48-int	LTR/ERV1	1	3157	(3497)	368910
1559	31.3	11.3	6.9	chr1	248859306	248860350	(96072)	+	L2a	LINE/L2	1651	2699	(720)	370897
12	6.3	8.1	5.0	chr1	248906545	248906581	(49841)	+	(GAGGCCG)n	Simple_repeat	1	40	(0)	370979
1659	22.4	12.9	0.9	chr10	427031	427471	(133369951)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	1	371518
1058	26.9	8.8	6.2	chr10	443446	444056	(133353366)	C	L1MC4	LINE/L1	(1091)	6791	5971	371536
185	36.2	2.9	2.5	chr10	692894	693053	(133104369)	+	L2b	LINE/L2	3111	3274	(113)	371740
182	15.2	0.0	2.9	chr10	693273	693306	(133104116)	+	L2c	LINE/L2	3354	3386	(1)	371741
1620	25.0	3.4	0.1	chr10	752626	753211	(133044211)	+	L1MA7	LINE/L1	2118	2722	(3822)	371804
638	17.1	6.8	9.4	chr10	753317	753497	(133043925)	+	MLT2B2	LTR/ERVL	387	562	(0)	371812
7294	3.5	0.8	0.1	chr10	1275508	1276569	(132520853)	C	L1PA4	LINE/L1	(1)	6154	5078	372439
530	30.4	8.0	3.2	chr10	2754208	2754412	(131043010)	+	L1ME3F	LINE/L1	5741	5962	(281)	374130
1554	20.6	6.8	2.2	chr10	2754416	2754782	(131042640)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	4	374136
1727	14.9	4.5	1.3	chr10	3053211	3053509	(130743913)	+	MER4C	LTR/ERV1	1	309	(156)	374559
1218	13.3	1.6	0.5	chr10	3053784	3053972	(130743450)	+	MER4C	LTR/ERV1	275	465	(0)	374559
657	22.0	0.0	0.0	chr10	3180284	3180401	(130617021)	C	AluJr	SINE/Alu	(194)	118	1	374723
1504	23.1	3.4	4.9	chr10	3180403	3180853	(130616569)	C	MLT1D	LTR/ERVL-MaLR	(61)	444	1	374722
1414	20.1	4.1	9.7	chr10	3404029	3404239	(130393183)	C	MER57B2	LTR/ERV1	(1)	402	194	375051
2298	11.2	0.0	0.0	chr10	3404240	3404543	(130392879)	C	AluSx1	SINE/Alu	(8)	304	1	375052
671	29.4	11.2	0.5	chr10	3662420	3662809	(130134613)	C	L2	LINE/L2	(933)	2486	2050	375387
21	0.0	7.5	4.7	chr10	4826284	4826323	(128971099)	+	(GCG)n	Simple_repeat	1	43	(0)	376971
1628	15.6	0.4	0.0	chr10	4856882	4857150	(128940272)	C	L1MB3	LINE/L1	(62)	6121	5852	377012
492	14.7	1.0	6.9	chr10	4857151	4857204	(128940218)	+	L1MA1	LINE/L1	6207	6261	(41)	377013
2835	11.7	2.1	2.6	chr10	4857205	4857633	(128939789)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	377014
13	9.2	2.4	9.3	chr10	6163681	6163722	(127633700)	+	G-rich	Low_complexity	1	43	(0)	379017
284	31.6	4.9	0.7	chr10	6175448	6175584	(127621838)	C	MIR	SINE/MIR	(104)	158	16	379037
13	18.7	1.4	1.4	chr10	6175634	6175678	(127621744)	+	A-rich	Low_complexity	1	45	(0)	379038
952	29.2	14.2	2.2	chr10	6175716	6176306	(127621116)	+	L1ME3	LINE/L1	5348	6021	(141)	379039
242	33.3	12.1	1.8	chr10	6454524	6454850	(127342572)	C	L2	LINE/L2	(817)	2602	2238	379538
216	33.3	7.0	5.4	chr10	7942948	7943131	(125854291)	+	L2a	LINE/L2	2647	2833	(586)	381875
14	12.8	2.8	2.7	chr10	7943238	7943273	(125854149)	+	(TGGCTTC)n	Simple_repeat	1	37	(0)	381876
183	29.8	10.9	6.6	chr10	8097452	8097573	(125699849)	C	MamTip2	DNA/hAT-Tip100	(127)	178	51	382126
13	22.9	1.6	6.2	chr10	11017856	11017918	(122779504)	+	(GCGCCCC)n	Simple_repeat	1	64	(0)	386429
17	11.3	5.5	6.9	chr10	11018021	11018075	(122779347)	+	(CGC)n	Simple_repeat	1	58	(0)	386430
12	15.9	5.7	0.0	chr10	11018300	11018369	(122779053)	+	(GGAGGCG)n	Simple_repeat	1	73	(0)	386431
514	19.2	14.6	0.7	chr10	11189536	11189682	(122607740)	C	L1ME1	LINE/L1	(6016)	384	214	386584
1019	11.4	4.3	23.6	chr10	12221812	12221910	(121575512)	+	MER30	DNA/hAT-Charlie	129	230	(0)	388423
797	30.7	8.9	6.0	chr10	12221911	12221925	(121575497)	C	MLT1L	LTR/ERVL-MaLR	(461)	149	137	388422
537	25.6	6.3	0.0	chr10	12221921	12222084	(121575338)	C	MER5A	DNA/hAT-Charlie	(4)	185	11	388425
2898	16.4	6.8	7.8	chr10	12628446	12629095	(121168327)	C	L1MC2	LINE/L1	(32)	6312	5670	389303
759	23.0	12.1	1.4	chr10	13340848	13341134	(120456288)	+	MER33	DNA/hAT-Charlie	3	324	(0)	390581
373	29.7	7.1	14.6	chr10	13349618	13350063	(120447359)	C	L2	LINE/L2	(801)	2618	2209	390597
430	28.2	9.7	2.0	chr10	13520061	13520259	(120277163)	+	MIRb	SINE/MIR	7	222	(46)	390923
83	28.9	1.2	0.8	chr10	14604707	14604958	(119192464)	+	(CT)n	Simple_repeat	1	255	(0)	392731
253	19.7	2.9	4.3	chr10	14648360	14648428	(119148994)	C	UCON25	Unknown	(116)	159	92	392807
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
2375	15.8	2.1	2.3	chr10	15562852	15563278	(118234144)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	394484
1310	24.1	7.8	4.0	chr10	17388025	17388470	(116408952)	C	LTR80A	LTR/ERVL	(99)	484	21	397285
279	10.0	0.3	10.5	chr10	18552605	18553307	(115244115)	+	(TTCCA)n	Simple_repeat	1	705	(0)	399307
1435	9.0	0.8	11.6	chr10	18555341	18563565	(115233857)	+	(GAATG)n	Satellite	1	8290	(0)	399308
1932	8.9	0.5	11.4	chr10	18563574	18573516	(115223906)	+	(TTCCA)n	Simple_repeat	1	9997	(0)	399309
23677	7.4	0.9	0.2	chr10	18573539	18576517	(115220905)	+	HERVIP10F-int	LTR/ERV1	3107	6106	(1631)	399310
625	29.6	4.2	1.9	chr10	19985742	19985999	(113811423)	+	L2	LINE/L2	2769	3032	(387)	401420
20	17.5	2.2	0.0	chr10	19986066	19986110	(113811312)	+	(ATGA)n	Simple_repeat	1	46	(0)	401421
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
553	25.6	8.0	0.6	chr10	22442536	22442708	(111354714)	C	MIR3	SINE/MIR	(13)	195	9	405272
1327	27.4	1.8	3.8	chr10	24416493	24416887	(109380535)	C	MER115	DNA/hAT-Tip100	(25)	668	282	408460
1892	11.9	10.0	0.0	chr10	24926389	24926648	(108870774)	C	AluSx1	SINE/Alu	(23)	289	1	409408
16	16.7	0.0	0.0	chr10	24926738	24926771	(108870651)	+	(CTGGTC)n	Simple_repeat	1	34	(0)	409409
15	25.6	0.0	0.0	chr10	25175005	25175046	(108622376)	+	(AGC)n	Simple_repeat	1	42	(0)	409842
4068	11.3	11.1	3.0	chr10	26307800	26308465	(107488957)	+	LTR8A	LTR/ERV1	1	727	(0)	411414
511	23.0	5.4	0.7	chr10	26504220	26504359	(107293063)	+	Tigger9a	DNA/TcMar-Tigger	577	723	(9)	411789
1637	24.1	4.2	11.7	chr10	26627408	26627998	(107169424)	C	MER74A	LTR/ERVL	(13)	545	1	412030
40	4.9	0.0	0.0	chr10	30645640	30645682	(103151740)	+	(TG)n	Simple_repeat	1	43	(0)	419147
907	13.3	0.0	2.5	chr10	31495589	31495750	(102301672)	C	L1MA4	LINE/L1	(0)	6300	6143	420362
218	33.9	15.9	0.0	chr10	31760541	31760667	(102036755)	+	MIR3	SINE/MIR	47	197	(11)	420706
2028	13.4	1.0	0.7	chr10	32176703	32177001	(101620421)	+	AluSz	SINE/Alu	1	300	(12)	421484
1324	15.7	6.7	23.1	chr10	32217857	32218294	(101579128)	+	Tigger4b	DNA/TcMar-Tigger	1	361	(0)	421575
11	20.1	9.1	2.8	chr10	35127069	35127134	(98670288)	+	(GCCGGCT)n	Simple_repeat	1	72	(0)	426040
17	20.1	3.5	7.8	chr10	35127230	35127316	(98670106)	+	(AGCGG)n	Simple_repeat	1	90	(0)	426041
14	25.8	0.0	3.7	chr10	35127384	35127437	(98669985)	+	(CGCCGCC)n	Simple_repeat	1	54	(0)	426042
197	37.2	3.4	0.0	chr10	35448194	35448279	(98349143)	C	L2a	LINE/L2	(1)	3425	3337	426602
631	25.6	9.1	0.5	chr10	35448334	35448525	(98348897)	+	MIR	SINE/MIR	23	232	(30)	426603
37	27.4	3.7	4.1	chr10	35640753	35640941	(98156481)	+	(GCC)n	Simple_repeat	1	196	(0)	426868
27	16.4	5.6	4.3	chr10	35640872	35640960	(98156462)	+	(CGG)n	Simple_repeat	1	94	(0)	426869
13	25.9	0.0	2.3	chr10	35643358	35643400	(98154022)	+	(GCC)n	Simple_repeat	1	43	(0)	426872
12	19.9	2.9	0.0	chr10	35643412	35643446	(98153976)	+	G-rich	Low_complexity	1	36	(0)	426873
697	24.4	11.8	1.2	chr10	43338445	43338685	(90458737)	C	LTR16	LTR/ERVL	(130)	308	39	433279
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
19	15.9	2.4	0.0	chr10	43648829	43648870	(90148552)	+	(GCCGGC)n	Simple_repeat	1	43	(0)	433924
897	29.1	8.0	3.9	chr10	43897532	43898046	(89899376)	C	LTR16E2	LTR/ERVL	(9)	559	1	434253
256	35.6	4.3	4.3	chr10	44017491	44017628	(89779794)	+	L2b	LINE/L2	3238	3375	(0)	434396
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
14	4.5	4.3	0.0	chr10	44386944	44386966	(89410456)	+	(CTT)n	Simple_repeat	1	24	(0)	434793
347	28.0	14.3	3.0	chr10	44398225	44398444	(89398978)	C	MIR	SINE/MIR	(20)	242	2	434807
236	17.4	0.0	4.2	chr10	44398576	44398623	(89398799)	+	MIRc	SINE/MIR	201	246	(22)	434808
12	21.5	6.0	1.9	chr10	45727311	45727360	(88070062)	+	(GGCTG)n	Simple_repeat	1	53	(0)	436502
11	24.3	4.0	1.9	chr10	46556353	46556402	(87241020)	+	G-rich	Low_complexity	1	52	(0)	437855
8498	17.5	2.2	4.0	chr10	46992423	46993585	(86803837)	C	L1P4a	LINE/L1	(4719)	2216	1041	438556
4329	12.9	1.2	4.2	chr10	47166758	47167248	(86630174)	+	LTR12_	LTR/ERV1	1	478	(210)	438800
198	29.6	18.1	0.6	chr10	47230623	47230782	(86566640)	C	L2b	LINE/L2	(94)	3281	3088	438900
228	35.7	7.7	1.8	chr10	47230932	47231102	(86566320)	+	L1ME4c	LINE/L1	235	416	(414)	438908
234	25.9	4.7	8.0	chr10	48444743	48444830	(85352592)	+	MIRb	SINE/MIR	108	192	(76)	440553
13	13.6	0.0	7.9	chr10	48445090	48445127	(85352295)	+	(CTGC)n	Simple_repeat	1	38	(0)	440554
244	21.3	5.1	7.4	chr10	48671846	48671926	(85125496)	C	L1M3de	LINE/L1	(5662)	991	913	440863
3397	17.5	1.9	1.9	chr10	48690438	48691076	(85106346)	C	MER52D	LTR/ERV1	(585)	1538	900	440892
238	22.2	0.0	0.0	chr10	48691078	48691122	(85106300)	C	MER52D	LTR/ERV1	(1609)	514	470	440892
306	25.8	0.0	6.1	chr10	49762596	49762694	(84034728)	+	MIRb	SINE/MIR	130	222	(46)	442268
16	9.1	2.6	5.0	chr10	50623872	50623910	(83173512)	+	(CCCGCCG)n	Simple_repeat	1	40	(0)	443660
235	25.4	17.9	7.7	chr10	50628154	50628362	(83169060)	C	MLT1O	LTR/ERVL-MaLR	(59)	483	249	443664
2685	20.7	8.9	5.1	chr10	53022649	53023179	(80774243)	+	MER50	LTR/ERV1	1	541	(193)	447078
4116	17.3	4.8	2.5	chr10	57246851	57247622	(76549800)	+	LTR1E	LTR/ERV1	1	791	(13)	452490
14	14.4	5.0	2.4	chr10	59362668	59362707	(74434715)	+	G-rich	Low_complexity	1	42	(0)	455458
23	11.4	0.0	0.0	chr10	59906294	59906331	(73891091)	+	(CCG)n	Simple_repeat	1	38	(0)	456271
836	30.0	9.4	4.7	chr10	62387774	62388347	(71409075)	+	L2a	LINE/L2	2732	3426	(0)	459983
13	20.3	0.0	4.7	chr10	62818928	62818970	(70978452)	+	G-rich	Low_complexity	1	43	(0)	460647
457	30.2	2.1	3.5	chr10	63241474	63241617	(70555805)	+	L2a	LINE/L2	2821	2962	(457)	461405
707	31.1	4.8	0.9	chr10	63241677	63241897	(70555525)	+	L2a	LINE/L2	3192	3421	(5)	461405
300	32.4	9.3	4.3	chr10	63532960	63533143	(70264279)	+	L3	LINE/CR1	3794	3987	(112)	461958
554	30.6	11.5	6.0	chr10	63670482	63670846	(70126576)	+	MLT1I	LTR/ERVL-MaLR	27	409	(2)	462219
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
17	24.9	1.9	0.0	chr10	68560198	68560249	(65237173)	+	G-rich	Low_complexity	1	53	(0)	469546
13	18.9	2.8	0.0	chr10	68561552	68561587	(65235835)	+	G-rich	Low_complexity	1	37	(0)	469548
226	23.1	0.0	0.0	chr10	69313115	69313166	(64484256)	C	MER96	DNA/hAT-Tip100	(122)	53	2	471345
366	24.6	5.3	0.8	chr10	69313205	69313331	(64484091)	C	MER102a	DNA/hAT-Charlie	(1)	329	197	471346
21	12.1	0.0	0.0	chr10	69318820	69318855	(64478567)	+	(GAG)n	Simple_repeat	1	36	(0)	471359
354	31.1	5.0	2.6	chr10	69329539	69329693	(64467729)	C	MIRb	SINE/MIR	(99)	169	11	471379
470	24.8	8.0	11.2	chr10	69378294	69378579	(64418843)	+	L1M5	LINE/L1	3995	4270	(1876)	471475
1361	19.6	2.2	0.4	chr10	69727926	69728196	(64069226)	+	MER58B	DNA/hAT-Charlie	1	276	(65)	472151
230	29.0	0.0	0.0	chr10	69728364	69728432	(64068990)	+	MIRb	SINE/MIR	190	258	(10)	472152
692	24.0	12.7	0.6	chr10	69728485	69728664	(64068758)	+	MIR	SINE/MIR	58	262	(0)	472153
940	30.9	8.1	2.5	chr10	69839670	69840180	(63957242)	C	L2a	LINE/L2	(337)	3082	2541	472355
505	35.3	5.7	0.9	chr10	69929748	69930000	(63867422)	+	MIR	SINE/MIR	4	261	(1)	472493
13	20.3	1.5	8.8	chr10	70053946	70054012	(63743410)	+	(CCAGC)n	Simple_repeat	1	68	(0)	472662
332	32.4	6.5	0.7	chr10	70331206	70331351	(63466071)	C	MIRb	SINE/MIR	(6)	262	108	473218
227	25.9	5.7	6.5	chr10	70509327	70509450	(63287972)	+	MIRc	SINE/MIR	113	235	(33)	473624
920	31.0	3.2	2.7	chr10	70970632	70971001	(62826421)	+	L1ME1	LINE/L1	59	413	(5987)	474430
429	32.4	2.7	7.7	chr10	70971114	70971387	(62826035)	+	L1ME1	LINE/L1	568	827	(5573)	474430
33	7.6	0.0	0.0	chr10	71224229	71224270	(62573152)	+	(AC)n	Simple_repeat	1	42	(0)	474821
61	0.0	0.0	0.0	chr10	71224365	71224416	(62573006)	+	(AC)n	Simple_repeat	1	52	(0)	474822
344	32.1	13.3	3.3	chr10	71270398	71270765	(62526657)	C	L2a	LINE/L2	(483)	2936	2536	474909
759	26.9	18.2	0.9	chr10	71629110	71629439	(62167983)	C	L2a	LINE/L2	(1)	3425	3026	475639
186	29.5	5.9	3.1	chr10	71629476	71629573	(62167849)	C	L2a	LINE/L2	(519)	2900	2800	475639
364	30.6	12.2	3.7	chr10	71665215	71665431	(62131991)	+	L2	LINE/L2	2580	2817	(602)	475703
257	27.4	9.8	1.9	chr10	71665472	71665631	(62131791)	C	L2a	LINE/L2	(311)	3115	2942	475702
344	25.0	2.1	0.0	chr10	71750310	71750401	(62047021)	+	MER94	DNA/hAT-Blackjack	40	133	(1)	475838
258	29.3	9.2	1.9	chr10	71848359	71848495	(61948927)	+	MIR3	SINE/MIR	19	169	(39)	476007
389	26.8	6.2	0.0	chr10	71920480	71920612	(61876810)	+	L2a	LINE/L2	3205	3401	(25)	476195
252	22.3	3.5	10.2	chr10	71920620	71920665	(61876757)	C	MIRb	SINE/MIR	(119)	89	45	476196
4960	8.8	1.7	1.9	chr10	71920666	71921357	(61876065)	C	LTR8	LTR/ERV1	(0)	691	1	476197
258	26.8	5.4	2.4	chr10	72265433	72265558	(61531864)	+	Charlie16a	DNA/hAT-Charlie	144	273	(69)	476903
13	3.7	10.7	0.0	chr10	72312137	72312164	(61485258)	+	(ATGTAT)n	Simple_repeat	1	31	(0)	477022
2436	18.3	1.9	6.7	chr10	72312169	72312466	(61484956)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	178	477023
2202	11.4	0.7	0.0	chr10	72312467	72312763	(61484659)	C	AluSg4	SINE/Alu	(11)	299	1	477024
301	23.4	5.9	15.8	chr10	73907336	73907411	(59890011)	+	L2a	LINE/L2	3320	3426	(0)	480141
25	16.6	1.3	7.5	chr10	74825382	74825460	(58971962)	+	G-rich	Low_complexity	1	80	(0)	481941
895	20.1	0.0	0.0	chr10	74871551	74871689	(58925733)	+	AluJr4	SINE/Alu	2	140	(172)	482036
281	20.2	17.4	8.8	chr10	74871831	74871955	(58925467)	+	MIRc	SINE/MIR	43	180	(88)	482037
439	31.7	6.8	8.0	chr10	75106259	75106803	(58690619)	+	L2b	LINE/L2	2910	3426	(0)	482434
23	17.6	0.0	1.9	chr10	75111564	75111616	(58685806)	+	(CGCCCC)n	Simple_repeat	1	53	(0)	482444
11	28.5	4.3	5.1	chr10	75111911	75112004	(58685418)	+	G-rich	Low_complexity	1	98	(0)	482445
562	29.2	12.2	2.9	chr10	75410518	75410995	(58386427)	+	L2b	LINE/L2	2759	3291	(84)	483062
500	32.9	2.9	1.2	chr10	75781741	75781933	(58015489)	C	MIRb	SINE/MIR	(56)	212	11	483589
288	31.9	5.7	7.0	chr10	78143575	78143941	(55653481)	C	MLT1J	LTR/ERVL-MaLR	(213)	299	2	487260
758	31.2	6.1	4.1	chr10	78144070	78144345	(55653077)	C	LTR85a	LTR/Gypsy?	(0)	702	418	487261
17	29.9	1.5	1.4	chr10	78170619	78170686	(55626736)	+	G-rich	Low_complexity	1	69	(0)	487305
591	28.0	3.6	2.6	chr10	78170840	78171033	(55626389)	+	MIR	SINE/MIR	13	208	(54)	487306
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
66	39.6	1.2	0.6	chr10	79220751	79221096	(54576326)	+	(GT)n	Simple_repeat	1	350	(0)	489280
25	22.3	0.0	0.0	chr10	79221244	79221293	(54576129)	+	(GT)n	Simple_repeat	1	50	(0)	489281
18	20.8	4.6	2.9	chr10	79221294	79221307	(54576115)	+	(CGTG)n	Simple_repeat	2	68	(0)	489282
276	32.7	7.1	0.0	chr10	79261689	79261792	(54535630)	+	MIRb	SINE/MIR	149	260	(8)	489347
16376	9.6	4.0	1.8	chr10	80953487	80955434	(52841988)	C	MER61-int	LTR/ERV1	(473)	4744	2783	491955
383	17.3	20.6	0.7	chr10	83218129	83218279	(50579143)	+	MER53	DNA/hAT	1	189	(4)	495109
238	29.9	13.0	3.1	chr10	84296535	84296693	(49500729)	C	LTR88b	LTR/Gypsy?	(382)	455	279	496637
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
534	19.6	21.5	1.2	chr10	86265379	86265548	(47531874)	C	MIRb	SINE/MIR	(34)	234	21	499220
214	31.0	2.0	9.1	chr10	86721488	86721597	(47075825)	+	MER5A	DNA/hAT-Charlie	17	118	(71)	500011
1073	14.4	7.5	0.0	chr10	86721640	86721813	(47075609)	+	MER5A	DNA/hAT-Charlie	2	189	(0)	500012
319	35.1	4.0	1.8	chr10	86721854	86722024	(47075398)	+	L1M5	LINE/L1	4362	4536	(1610)	500013
985	14.4	0.0	0.0	chr10	87095785	87095930	(46701492)	+	FRAM	SINE/Alu	1	146	(30)	500705
3784	15.4	2.5	3.6	chr10	87624571	87625255	(46172167)	+	MER57A-int	LTR/ERV1	1	677	(5510)	501567
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
2278	11.2	1.0	0.0	chr10	89393451	89393753	(44403669)	+	AluSx	SINE/Alu	1	306	(6)	504308
6304	15.8	2.1	8.1	chr10	91744962	91745444	(42051978)	+	L1M3f	LINE/L1	1494	1947	(4618)	507786
6284	20.3	3.0	2.9	chr10	91781419	91782783	(42014639)	C	MLT1C-int	LTR/ERVL-MaLR	(0)	1371	6	507844
1225	19.4	2.0	0.8	chr10	91782791	91783040	(42014382)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	213	507844
330	33.7	3.5	1.2	chr10	92573184	92573348	(41224074)	+	MIR3	SINE/MIR	16	184	(24)	509416
217	23.6	5.3	5.3	chr10	93062471	93062546	(40734876)	C	L2c	LINE/L2	(211)	3176	3101	510383
301	26.5	12.6	0.8	chr10	93496848	93496980	(40300442)	C	MIRb	SINE/MIR	(24)	244	94	511238
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
17	0.0	0.0	0.0	chr10	95392265	95392283	(38405139)	+	(A)n	Simple_repeat	1	19	(0)	514196
185	26.7	6.2	2.2	chr10	96514271	96514362	(37283060)	+	MIR	SINE/MIR	10	105	(157)	516114
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
11	16.5	5.9	0.0	chr10	96832966	96832999	(36964423)	+	(GAGGTG)n	Simple_repeat	1	36	(0)	516805
474	27.2	3.1	0.8	chr10	97542926	97543051	(36254371)	+	MER5B	DNA/hAT-Charlie	1	129	(49)	518187
14	18.2	0.0	0.0	chr10	97737144	97737174	(36060248)	+	(GCG)n	Simple_repeat	1	31	(0)	518629
277	30.1	1.2	0.0	chr10	98908749	98908831	(34888591)	+	L1ME3B	LINE/L1	5955	6038	(86)	520699
619	27.1	12.6	6.2	chr10	98908848	98909232	(34888190)	+	MLT1J2	LTR/ERVL-MaLR	15	427	(21)	520700
240	31.2	9.0	4.7	chr10	99431457	99431604	(34365818)	+	L2c	LINE/L2	3047	3201	(186)	521450
20	19.8	1.8	3.5	chr10	99537620	99537676	(34259746)	+	GA-rich	Low_complexity	1	58	(0)	521641
328	28.7	0.9	5.3	chr10	99538358	99538471	(34258951)	+	L2c	LINE/L2	3018	3126	(261)	521643
2395	9.5	0.0	1.6	chr10	99917684	99917998	(33879424)	+	AluSg	SINE/Alu	1	310	(0)	522323
27	20.0	1.8	0.0	chr10	100626402	100626458	(33170964)	+	(TG)n	Simple_repeat	1	58	(0)	523683
386	23.3	11.9	4.3	chr10	100680702	100680840	(33116582)	+	MIRb	SINE/MIR	102	252	(16)	523795
33	16.3	3.0	5.8	chr10	100745288	100745387	(33052035)	+	(CTCC)n	Simple_repeat	1	103	(0)	523906
41	21.0	4.5	0.9	chr10	100829221	100829331	(32968091)	+	(CT)n	Simple_repeat	1	116	(0)	524015
2127	12.2	0.3	2.8	chr10	101041499	101041818	(32755604)	C	AluJb	SINE/Alu	(0)	312	1	524367
12	25.9	0.0	2.3	chr10	101227125	101227167	(32570255)	+	G-rich	Low_complexity	1	43	(0)	524691
13	9.7	0.0	0.0	chr10	101227438	101227459	(32569963)	+	(GCC)n	Simple_repeat	1	22	(0)	524692
15	21.4	0.0	0.0	chr10	101311101	101311138	(32486284)	+	(CTTCCT)n	Simple_repeat	1	38	(0)	524854
14	22.6	0.0	0.0	chr10	101779876	101779911	(32017511)	+	(ATGC)n	Simple_repeat	1	36	(0)	525668
274	27.1	6.6	1.2	chr10	102410318	102410403	(31387019)	+	MIR3	SINE/MIR	32	122	(86)	526868
209	23.6	1.8	1.8	chr10	102419335	102419390	(31378032)	+	L3b	LINE/CR1	4992	5047	(185)	526879
263	22.4	20.1	0.0	chr10	102671282	102671388	(31126034)	C	MIRb	SINE/MIR	(9)	259	126	527350
1933	11.7	0.0	5.2	chr10	102715041	102715348	(31082074)	C	AluJb	SINE/Alu	(20)	292	1	527439
19	3.3	3.0	2.9	chr10	103277375	103277407	(30520015)	+	(CCTCGG)n	Simple_repeat	1	34	(0)	528586
12	25.1	4.3	0.0	chr10	103277411	103277457	(30519965)	+	(GCCGGCG)n	Simple_repeat	1	49	(0)	528587
3340	15.9	4.0	3.6	chr10	104800004	104800673	(28996749)	+	L1MC1	LINE/L1	5661	6333	(0)	531303
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
2248	18.3	3.1	0.0	chr10	107187221	107187630	(26609792)	+	MSTB	LTR/ERVL-MaLR	1	423	(3)	534898
3200	26.8	8.2	3.9	chr10	107187631	107188329	(26609093)	C	L1MD1	LINE/L1	(5840)	793	4	534886
411	30.6	8.6	10.9	chr10	109930908	109931117	(23866305)	+	MER102a	DNA/hAT-Charlie	114	329	(1)	538618
296	24.3	0.0	2.8	chr10	110207270	110207341	(23590081)	C	MIRb	SINE/MIR	(4)	264	195	539102
22	22.1	0.0	3.6	chr10	110207604	110207659	(23589763)	+	(CA)n	Simple_repeat	1	56	(0)	539103
259	23.5	19.1	6.4	chr10	110216331	110216439	(23580983)	C	L2a	LINE/L2	(0)	3426	3301	539119
2342	9.9	0.0	0.0	chr10	110459374	110459666	(23337756)	+	AluSc8	SINE/Alu	2	294	(17)	539557
31	0.0	3.3	0.0	chr10	110459667	110459696	(23337726)	+	(AG)n	Simple_repeat	1	31	(0)	539558
1774	19.9	6.4	2.0	chr10	110459697	110459972	(23337450)	+	MLT1C	LTR/ERVL-MaLR	184	466	(1)	539556
237	30.1	3.1	1.1	chr10	111131345	111131438	(22665984)	+	UCON132b	DNA/hAT-Tip100	27	122	(26)	540652
461	30.1	3.5	0.6	chr10	112838747	112838913	(20958509)	+	MIRb	SINE/MIR	7	178	(90)	543288
277	29.6	11.3	5.2	chr10	112839207	112839495	(20957927)	C	L2b	LINE/L2	(85)	3290	2982	543289
182	34.8	0.0	1.4	chr10	112885741	112885810	(20911612)	+	L3	LINE/CR1	3918	3986	(113)	543393
365	30.8	13.9	6.4	chr10	112885863	112886396	(20911026)	+	MLT1K	LTR/ERVL-MaLR	3	583	(12)	543394
16	35.7	0.0	0.0	chr10	112950432	112950491	(20846931)	+	(TT)n	Simple_repeat	1	60	(0)	543548
21	4.0	0.0	0.0	chr10	113058695	113058720	(20738702)	+	(TG)n	Simple_repeat	1	26	(0)	543724
21786	13.6	3.9	2.6	chr10	113200729	113202444	(20594978)	+	L1M1	LINE/L1	16	1752	(5813)	543915
49	0.0	2.2	0.0	chr10	113202445	113202489	(20594933)	+	(CA)n	Simple_repeat	1	46	(0)	543916
21786	12.1	3.4	1.6	chr10	113202490	113205657	(20591765)	+	L1M1	LINE/L1	1753	4986	(2579)	543915
21	15.9	0.0	0.0	chr10	114173880	114173921	(19623501)	+	(CTCGCC)n	Simple_repeat	1	42	(0)	545512
13	26.4	4.8	4.5	chr10	117131280	117131363	(16666059)	+	GA-rich	Low_complexity	1	88	(0)	549926
182	19.7	18.3	1.3	chr10	117217368	117217444	(16579978)	+	MIR1_Amn	SINE/MIR	15	107	(123)	550086
31	3.9	5.3	3.3	chr10	117541603	117541659	(16255763)	+	(ATA)n	Simple_repeat	1	60	(0)	550653
65	21.4	0.0	0.0	chr10	117542303	117542494	(16254928)	+	GA-rich	Low_complexity	1	192	(0)	550654
15	0.0	0.0	0.0	chr10	117543427	117543445	(16253977)	+	(GCC)n	Simple_repeat	1	19	(0)	550659
17	16.9	4.2	2.0	chr10	117547946	117547993	(16249429)	+	G-rich	Low_complexity	1	50	(0)	550660
14	27.9	1.7	1.7	chr10	118594980	118595037	(15202385)	+	(GCACCA)n	Simple_repeat	1	59	(0)	552301
402	28.2	1.4	0.0	chr10	118627372	118627494	(15169928)	+	MIR3	SINE/MIR	8	137	(131)	552352
15	20.1	6.2	2.0	chr10	119029518	119029565	(14767857)	+	(GC)n	Simple_repeat	1	51	(0)	553069
20	19.6	1.4	6.8	chr10	119029600	119029672	(14767750)	+	G-rich	Low_complexity	1	74	(0)	553070
1932	10.1	1.7	5.5	chr10	119139252	119139558	(14657864)	+	AluSx3	SINE/Alu	1	295	(16)	553308
1598	18.9	2.7	7.9	chr10	119222991	119223381	(14574041)	C	MLT1B	LTR/ERVL-MaLR	(7)	383	14	553490
1625	29.3	9.8	3.5	chr10	119585671	119586843	(14210579)	+	L2b	LINE/L2	1868	3127	(248)	554182
338	30.2	5.5	1.5	chr10	119749559	119749763	(14047659)	+	MIR3	SINE/MIR	1	217	(51)	554523
1914	12.1	3.6	0.0	chr10	119749804	119750068	(14047354)	C	AluSx	SINE/Alu	(37)	275	1	554524
218	30.0	0.0	11.8	chr10	120964817	120964918	(12832504)	C	L2a	LINE/L2	(9)	3417	3328	556432
405	21.4	7.6	2.7	chr10	121974358	121974506	(11822916)	C	MER5A	DNA/hAT-Charlie	(1)	188	32	558053
1850	20.1	6.4	5.1	chr10	122740642	122741133	(11056289)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	7	559277
226	38.7	2.8	0.6	chr10	123133859	123134032	(10663390)	+	MIRc	SINE/MIR	86	263	(5)	559847
13	25.8	0.0	0.0	chr10	123137598	123137634	(10659788)	+	(CGG)n	Simple_repeat	1	37	(0)	559854
212	32.8	12.0	4.2	chr10	124064787	124064977	(9732445)	+	L2b	LINE/L2	3097	3304	(71)	561305
181	37.7	2.8	0.9	chr10	124091003	124091109	(9706313)	+	MIR1_Amn	SINE/MIR	50	158	(72)	561344
868	15.7	0.0	0.0	chr10	124461440	124461573	(9335849)	C	FLAM_C	SINE/Alu	(8)	135	2	561976
16	15.4	2.8	0.0	chr10	124461792	124461827	(9335595)	+	(GCGCCG)n	Simple_repeat	1	37	(0)	561977
360	28.8	5.5	1.4	chr10	124465075	124465272	(9332150)	C	L2b	LINE/L2	(216)	3210	3003	561988
239	35.9	2.5	1.7	chr10	124465296	124465414	(9332008)	C	L2b	LINE/L2	(501)	2918	2799	561988
12	7.1	2.9	8.3	chr10	124705298	124705332	(9092090)	+	(GGCGGA)n	Simple_repeat	1	36	(0)	562328
280	31.0	1.4	0.0	chr10	124705333	124705403	(9092019)	+	MIR3	SINE/MIR	99	170	(38)	562329
269	35.7	1.4	12.0	chr10	124705406	124705714	(9091708)	+	L2b	LINE/L2	3096	3371	(4)	562330
10948	23.5	8.0	2.0	chr10	125677982	125679844	(8117578)	C	L1MA3	LINE/L1	(5065)	2501	358	563849
597	19.4	8.1	6.1	chr10	126322395	126322575	(7474847)	+	MER20	DNA/hAT-Charlie	1	185	(34)	564711
272	30.2	7.3	0.7	chr10	126322676	126322815	(7474607)	C	MIRb	SINE/MIR	(108)	160	11	564712
209	31.0	9.4	0.0	chr10	127143696	127143782	(6653640)	+	MIR1_Amn	SINE/MIR	37	132	(98)	565837
14	13.7	0.0	5.6	chr10	127737298	127737333	(6060089)	+	(GGCCC)n	Simple_repeat	1	36	(0)	566561
6719	21.9	5.1	6.0	chr10	131665651	131667116	(2130306)	+	L1MD2	LINE/L1	4457	5906	(453)	570795
430	20.2	1.1	0.0	chr10	131667121	131667214	(2130208)	C	MLT1E1	LTR/ERVL-MaLR	(50)	630	536	570797
906	29.8	8.8	3.0	chr10	131759658	131760128	(2037294)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	570904
283	20.8	33.9	0.0	chr10	132298027	132298194	(1499228)	+	LTR33C	LTR/ERVL	78	303	(326)	571492
441	26.9	1.5	2.3	chr10	132298216	132298348	(1499074)	+	MLT1H	LTR/ERVL-MaLR	111	242	(307)	571493
303	29.2	8.4	0.8	chr10	132298422	132298542	(1498880)	+	MLT1F1	LTR/ERVL-MaLR	1	131	(438)	571494
257	17.3	3.7	0.0	chr10	132309428	132309479	(1487943)	+	MLT1I	LTR/ERVL-MaLR	351	404	(7)	571501
13	14.6	7.9	0.0	chr10	132366844	132366881	(1430541)	+	(AGAGCAGG)n	Simple_repeat	1	41	(0)	571580
317	21.7	2.4	0.0	chr10	132379494	132379576	(1417846)	C	L1MCc	LINE/L1	(4899)	1524	1440	571591
337	32.0	2.6	9.3	chr10	132409748	132410042	(1387380)	C	L2b	LINE/L2	(147)	3228	2953	571613
258	35.1	10.2	0.0	chr10	132412536	132412720	(1384702)	C	L1MC5a	LINE/L1	(743)	2034	1829	571615
265	32.8	7.1	3.7	chr10	132412797	132413094	(1384328)	C	L1MC5	LINE/L1	(945)	8359	8051	571616
1216	11.1	0.6	1.7	chr10	132987665	132987836	(809586)	C	AluSq	SINE/Alu	(10)	303	134	572105
12	25.1	0.0	8.1	chr10	133101193	133101254	(696168)	+	(CCGC)n	Simple_repeat	1	62	(0)	572167
2019	9.3	5.3	0.0	chr10	133217811	133218078	(579344)	+	AluSg	SINE/Alu	17	299	(11)	572273
81	26.6	1.9	6.2	chr10	133243049	133243412	(554010)	+	(GT)n	Simple_repeat	1	371	(0)	572304
14	10.1	6.2	0.0	chr10	133262877	133262908	(534514)	+	(ACACGC)n	Simple_repeat	1	34	(0)	572320
27	9.8	1.6	6.3	chr10	133324733	133324794	(472628)	+	(GGCTGG)n	Simple_repeat	1	63	(0)	572391
464	11.2	4.9	2.5	chr11	316555	316634	(134769988)	+	AluSz6	SINE/Alu	208	289	(23)	573240
460	15.2	0.0	0.0	chr11	616099	616177	(134470445)	+	Alu	SINE/Alu	218	296	(16)	573633
20	17.9	2.2	2.1	chr11	637987	638032	(134448590)	+	(AC)n	Simple_repeat	1	47	(0)	573672
2336	7.1	0.0	0.0	chr11	743266	743574	(134343048)	C	AluY	SINE/Alu	(0)	311	1	573875
2346	10.2	0.3	1.6	chr11	743575	743709	(134342913)	C	AluSx	SINE/Alu	(176)	136	1	573874
1074	26.4	7.4	3.5	chr11	743710	743863	(134342759)	C	L1M5	LINE/L1	(617)	5562	5402	573873
756	13.1	19.3	0.0	chr11	743872	744047	(134342575)	+	MER30	DNA/hAT-Charlie	1	218	(12)	573876
37	23.6	2.4	3.1	chr11	777157	777282	(134309340)	+	(CCCCCG)n	Simple_repeat	1	129	(0)	573937
390	25.1	15.6	1.6	chr11	838654	838835	(134247787)	+	L2a	LINE/L2	3214	3425	(1)	574007
1632	19.2	0.7	3.1	chr11	841925	842047	(134244575)	C	AluJb	SINE/Alu	(188)	124	1	574010
14	16.4	2.9	0.0	chr11	842514	842547	(134244075)	+	(CGGCC)n	Simple_repeat	1	35	(0)	574012
17	24.1	1.6	3.2	chr11	910821	910882	(134175740)	+	(CGCGCCG)n	Simple_repeat	1	63	(0)	574078
1113	16.7	2.7	0.5	chr11	937621	937837	(134148785)	C	MER47A	DNA/TcMar-Tigger	(143)	223	2	574138
322	38.0	1.5	0.0	chr11	937845	937973	(134148649)	C	MIR	SINE/MIR	(123)	139	9	574139
2303	8.0	0.0	0.0	chr11	951267	951542	(134135080)	+	AluSx1	SINE/Alu	23	298	(14)	574166
377	31.8	8.6	2.9	chr11	951606	951780	(134134842)	C	MIR	SINE/MIR	(70)	192	7	574167
1616	18.1	1.4	2.4	chr11	951874	952161	(134134461)	C	AluJr	SINE/Alu	(19)	293	9	574168
1441	23.9	6.0	0.6	chr11	1059426	1059900	(134026722)	+	ERVL-B4-int	LTR/ERVL	1021	1522	(4192)	574280
263	33.0	0.0	0.0	chr11	1059952	1060042	(134026580)	+	ERVL-B4-int	LTR/ERVL	1414	1504	(3492)	574280
1581	14.8	1.2	0.4	chr11	1060105	1060348	(134026274)	+	AluJb	SINE/Alu	41	286	(26)	574281
127	20.4	6.9	0.7	chr11	1736511	1736889	(133349733)	+	(GAATG)n	Satellite	1	405	(0)	575021
191	29.4	4.2	0.0	chr11	1783418	1783485	(133303137)	C	MIRb	SINE/MIR	(170)	98	28	575079
12	19.8	0.0	9.1	chr11	1783526	1783580	(133303042)	+	(CCCAGCC)n	Simple_repeat	1	55	(0)	575080
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
3878	25.4	6.0	3.7	chr11	2327814	2328387	(132758235)	C	MLT1A1-int	LTR/ERVL-MaLR	(1153)	582	2	575681
1333	19.5	18.1	0.3	chr11	2328388	2328722	(132757900)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	575681
264	32.1	2.4	1.2	chr11	2723343	2723424	(132363198)	+	MIRb	SINE/MIR	94	176	(92)	576084
183	24.1	4.9	0.0	chr11	2892310	2892367	(132194255)	+	MIRc	SINE/MIR	89	149	(119)	576288
35	17.9	3.9	3.8	chr11	2892561	2892662	(132193960)	+	(CCT)n	Simple_repeat	1	106	(0)	576289
1642	14.9	5.4	0.0	chr11	2918718	2918978	(132167644)	C	AluJb	SINE/Alu	(20)	292	17	576312
369	24.3	7.7	1.7	chr11	2919059	2919230	(132167392)	C	MLT1K	LTR/ERVL-MaLR	(245)	350	168	576313
249	27.9	11.0	6.5	chr11	3093152	3093289	(131993333)	C	L3	LINE/CR1	(108)	3991	3847	576573
410	33.0	9.2	4.1	chr11	3161893	3162376	(131924246)	C	L2	LINE/L2	(353)	3066	2556	576655
14	23.9	0.0	7.9	chr11	3165324	3165386	(131921236)	+	GA-rich	Low_complexity	1	63	(0)	576656
255	27.8	11.3	4.3	chr11	4607619	4607757	(130478865)	+	HAL1ME	LINE/L1	2358	2507	(0)	578969
19	24.5	3.7	3.5	chr11	6474009	6474090	(128612532)	+	(CCCG)n	Simple_repeat	1	85	(0)	581386
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
246	29.5	12.6	6.1	chr11	8099210	8099357	(126987265)	C	MIRb	SINE/MIR	(56)	212	54	583492
380	31.4	16.6	4.1	chr11	8169152	8169668	(126916954)	+	L2	LINE/L2	2483	3077	(342)	583593
3347	22.9	12.3	5.2	chr11	8426899	8428286	(126658336)	C	L1MEh	LINE/L1	(377)	1858	358	583960
381	26.2	9.0	0.0	chr11	8688629	8688769	(126397853)	C	Charlie2a	DNA/hAT-Charlie	(1199)	1662	1508	584345
13	22.0	4.1	2.0	chr11	8927417	8927465	(126159157)	+	(TTCCT)n	Simple_repeat	1	51	(0)	584741
298	30.7	13.6	4.6	chr11	9569302	9569540	(125517082)	C	L2b	LINE/L2	(0)	3375	3112	586097
2045	15.7	0.3	0.0	chr11	9569569	9569868	(125516754)	+	AluJb	SINE/Alu	2	302	(10)	586098
1992	9.3	3.2	5.1	chr11	9572022	9572334	(125514288)	+	AluSx	SINE/Alu	1	307	(5)	586104
2280	9.8	0.3	2.2	chr11	9572390	9572706	(125513916)	+	AluSx1	SINE/Alu	1	311	(1)	586105
14	22.7	3.8	1.8	chr11	10450882	10450934	(124635688)	+	(CCCGGC)n	Simple_repeat	1	55	(0)	587572
16	12.7	6.7	2.1	chr11	10792708	10792752	(124293870)	+	G-rich	Low_complexity	1	48	(0)	588141
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
15	31.9	2.1	7.0	chr11	10931608	10931747	(124154875)	+	G-rich	Low_complexity	1	143	(0)	588402
312	20.9	13.3	0.0	chr11	10934289	10934379	(124152243)	+	MamRep1879	DNA/hAT-Tip100?	13	117	(99)	588409
399	31.5	2.9	2.9	chr11	10937006	10937175	(124149447)	C	MER5B	DNA/hAT-Charlie	(2)	176	7	588416
41	6.5	0.0	0.0	chr11	11076794	11076842	(124009780)	+	(AC)n	Simple_repeat	1	49	(0)	588628
52	12.6	0.0	0.0	chr11	11076843	11076865	(124009757)	+	(AT)n	Simple_repeat	1	23	(0)	588629
373	28.0	2.1	0.0	chr11	12104632	12104724	(122981898)	+	L2a	LINE/L2	3331	3425	(1)	590246
186	28.4	16.1	2.1	chr11	12104730	12104916	(122981706)	+	L2c	LINE/L2	2990	3207	(180)	590247
429	30.1	6.0	3.7	chr11	12104929	12105090	(122981532)	+	MIRb	SINE/MIR	3	168	(100)	590248
19	8.8	2.6	2.6	chr11	12674114	12674151	(122412471)	+	(CCGCC)n	Simple_repeat	1	39	(0)	591159
15	18.1	0.0	0.0	chr11	13009382	13009414	(122077208)	+	(CGCAGC)n	Simple_repeat	1	33	(0)	591659
2083	28.1	6.7	3.5	chr11	13434273	13435153	(121651469)	C	L2a	LINE/L2	(174)	3252	2314	592356
11	31.1	0.0	0.0	chr11	14358618	14358661	(120727961)	+	(CGCCCC)n	Simple_repeat	1	44	(0)	593747
15	22.1	4.9	3.1	chr11	14358682	14358742	(120727880)	+	(CGC)n	Simple_repeat	1	64	(0)	593748
12	17.4	0.0	5.6	chr11	14381423	14381458	(120705164)	+	(GCCC)n	Simple_repeat	1	36	(0)	593805
13	25.9	1.9	1.9	chr11	14969949	14970000	(120116622)	+	(CTCCTG)n	Simple_repeat	1	53	(0)	594763
589	17.9	6.4	0.0	chr11	14970257	14970373	(120116249)	+	MER63D	DNA/hAT-Blackjack	1	125	(936)	594764
214	28.7	4.4	12.8	chr11	15711704	15711795	(119374827)	+	MIR3	SINE/MIR	73	153	(55)	595986
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
237	20.6	9.3	2.9	chr11	17389779	17389848	(117696774)	C	Charlie24	DNA/hAT-Charlie	(5)	2445	2371	598664
22	27.5	3.2	4.7	chr11	17476825	17476948	(117609674)	+	(CCCCG)n	Simple_repeat	1	128	(0)	598821
13	27.9	3.6	0.0	chr11	17477109	17477164	(117609458)	+	G-rich	Low_complexity	1	58	(0)	598822
632	9.1	0.0	0.0	chr11	17479817	17479937	(117606685)	+	AluJb	SINE/Alu	194	312	(0)	598830
397	30.7	1.7	0.0	chr11	19117944	19118057	(115968565)	+	L2a	LINE/L2	3308	3423	(3)	601653
935	31.2	7.4	1.4	chr11	19218756	19219174	(115867448)	C	MLT2E	LTR/ERVL	(182)	446	1	601818
433	24.8	1.0	6.4	chr11	19765474	19765599	(115321023)	C	MER58C	DNA/hAT-Charlie	(221)	120	1	602829
724	32.0	9.3	3.9	chr11	19765602	19766089	(115320533)	+	L2a	LINE/L2	2910	3426	(0)	602828
4917	15.5	1.1	3.5	chr11	26149612	26150485	(108936137)	C	LTR1D	LTR/ERV1	(0)	975	1	612040
16	29.7	1.5	1.5	chr11	26157180	26157246	(108929376)	+	(TTTA)n	Simple_repeat	1	68	(0)	612055
16	22.1	0.0	0.0	chr11	26157216	26157247	(108929375)	+	(T)n	Simple_repeat	1	32	(0)	612056
248	21.9	5.4	10.3	chr11	26157358	26157474	(108929148)	C	L2a	LINE/L2	(135)	3291	3181	612057
764	26.6	7.2	9.7	chr11	26157467	26157837	(108928785)	C	L2	LINE/L2	(1938)	1481	1121	612058
18713	13.2	3.1	2.5	chr11	27031323	27038025	(108048597)	+	L1PA13	LINE/L1	30	6769	(14)	613330
19	19.2	0.0	0.0	chr11	27396509	27396552	(107690070)	+	(T)n	Simple_repeat	1	44	(0)	613872
12	29.8	0.0	0.0	chr11	27396723	27396764	(107689858)	+	(CTTTTT)n	Simple_repeat	1	42	(0)	613873
621	29.7	5.9	0.0	chr11	27628244	27628435	(107458187)	C	MLT1O	LTR/ERVL-MaLR	(220)	322	119	614294
21826	12.7	2.6	1.2	chr11	28787393	28793742	(106292880)	C	L1PA8A	LINE/L1	(0)	6446	2	616071
689	25.9	0.5	3.1	chr11	32570788	32570982	(102515640)	C	MIRc	SINE/MIR	(0)	268	79	621875
439	33.4	4.9	7.5	chr11	32570956	32571635	(102514987)	+	L2a	LINE/L2	2757	3407	(19)	621876
657	19.9	3.6	1.2	chr11	33310609	33310771	(101775851)	C	MER3	DNA/hAT-Charlie	(39)	170	4	623265
481	31.8	6.5	4.3	chr11	33310868	33311169	(101775453)	C	L1MC4a	LINE/L1	(5679)	563	255	623233
293	30.8	0.9	0.0	chr11	33970867	33970973	(101115649)	+	MIRb	SINE/MIR	158	265	(3)	624413
259	31.6	3.9	1.0	chr11	33970995	33971093	(101115529)	C	L3	LINE/CR1	(811)	3288	3187	624409
291	29.0	3.3	6.5	chr11	33971269	33971423	(101115199)	+	MamSINE1	SINE/tRNA-RTE	15	164	(126)	624414
23	26.6	3.5	1.1	chr11	34358179	34358265	(100728357)	+	G-rich	Low_complexity	1	90	(0)	625129
286	24.8	9.5	13.6	chr11	34358636	34358789	(100727833)	+	Charlie4z	DNA/hAT-Charlie	1	147	(20)	625130
9670	19.4	6.3	6.3	chr11	34550067	34553198	(100533424)	C	L1MDa	LINE/L1	(3375)	3162	19	625482
493	28.9	22.6	1.8	chr11	35548961	35549344	(99537278)	+	L2c	LINE/L2	2700	3165	(222)	626923
27	0.0	0.0	0.0	chr11	40293198	40293223	(94793399)	+	(GGGGGC)n	Simple_repeat	1	26	(0)	633692
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
274	28.1	5.0	3.0	chr11	44064136	44064234	(91022388)	+	L2a	LINE/L2	3325	3425	(1)	639498
295	30.9	0.5	4.2	chr11	44064237	44064359	(91022263)	C	MIR3	SINE/MIR	(53)	177	54	639499
43	0.0	0.0	0.0	chr11	44064565	44064601	(91022021)	+	(TG)n	Simple_repeat	1	37	(0)	639500
478	28.2	6.9	2.1	chr11	44760959	44761150	(90325472)	C	MIRb	SINE/MIR	(29)	239	38	640794
723	27.4	3.2	0.9	chr11	44884938	44885154	(90201468)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	641052
315	29.4	1.8	6.8	chr11	44885213	44885329	(90201293)	C	MIRc	SINE/MIR	(48)	214	104	641053
228	29.7	2.6	1.3	chr11	44912456	44912530	(90174092)	C	MIR3	SINE/MIR	(111)	97	22	641114
12	14.6	0.0	5.9	chr11	44912588	44912621	(90174001)	+	(ATGTT)n	Simple_repeat	1	34	(0)	641115
148	30.9	0.2	0.2	chr11	44978231	44978679	(90107943)	+	(GT)n	Simple_repeat	1	450	(0)	641238
251	33.9	3.5	0.0	chr11	44978944	44979055	(90107567)	+	L2c	LINE/L2	3263	3378	(9)	641239
284	28.4	3.1	10.9	chr11	45022078	45022215	(90064407)	+	MIRb	SINE/MIR	24	150	(118)	641336
296	31.2	1.0	0.0	chr11	45022251	45022346	(90064276)	C	MIRb	SINE/MIR	(114)	154	58	641337
456	24.6	7.8	0.0	chr11	45022431	45022560	(90064062)	C	L2a	LINE/L2	(8)	3418	3278	641338
336	28.2	8.0	1.3	chr11	45091444	45091594	(89995028)	+	UCON107	DNA/hAT-Tag1	44	205	(0)	641483
247	31.3	5.7	1.2	chr11	45091718	45091853	(89994769)	C	L2b	LINE/L2	(225)	3162	3019	641484
364	25.0	13.0	0.0	chr11	45585231	45585350	(89501272)	C	MIRb	SINE/MIR	(117)	151	14	642418
223	27.9	4.0	3.6	chr11	45585398	45585491	(89501131)	+	L2c	LINE/L2	3108	3205	(182)	642419
198	25.7	13.2	7.1	chr11	45803818	45803972	(89282650)	C	MIR3	SINE/MIR	(14)	194	29	642810
216	31.0	6.3	2.2	chr11	45923240	45923392	(89163230)	+	MIR3	SINE/MIR	35	195	(35)	643030
278	26.9	5.7	1.5	chr11	45923606	45923699	(89162923)	+	MIRc	SINE/MIR	89	193	(75)	643031
997	18.3	11.4	0.0	chr11	46238631	46238832	(88847790)	C	MIR	SINE/MIR	(1)	261	34	643569
491	27.7	2.2	5.3	chr11	46238837	46239023	(88847599)	C	MIR	SINE/MIR	(78)	184	4	643570
226	29.1	3.5	8.8	chr11	46243936	46244116	(88842506)	C	MER113A	DNA/hAT-Charlie	(3)	311	141	643576
16	0.0	0.0	0.0	chr11	46617337	46617354	(88469268)	+	(TC)n	Simple_repeat	1	18	(0)	644307
16	8.0	0.0	3.5	chr11	46826822	46826850	(88259772)	+	(CGG)n	Simple_repeat	1	29	(0)	644711
19	14.4	5.3	3.3	chr11	46918068	46918124	(88168498)	+	(CCCGGA)n	Simple_repeat	1	60	(0)	644902
13	21.3	4.5	5.7	chr11	46918203	46918269	(88168353)	+	G-rich	Low_complexity	1	70	(0)	644903
769	23.0	12.9	0.0	chr11	47143730	47143938	(87942684)	+	MIR	SINE/MIR	15	254	(8)	645332
539	22.3	9.2	2.8	chr11	47948099	47948241	(87138381)	C	MIR	SINE/MIR	(0)	262	110	647183
306	24.1	12.4	4.0	chr11	47948259	47948453	(87138169)	C	L2c	LINE/L2	(354)	3065	2836	647184
1278	24.5	13.9	2.8	chr11	47955126	47955515	(87131107)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	5	647203
685	29.3	8.8	0.5	chr11	47955537	47955745	(87130877)	C	MIRb	SINE/MIR	(40)	228	1	647204
260	25.8	6.2	7.0	chr11	57339917	57340045	(77746577)	+	L3	LINE/CR1	3965	4092	(7)	653487
826	30.7	9.4	6.3	chr11	57340544	57341075	(77745547)	C	L2b	LINE/L2	(2)	3373	2839	653488
298	27.3	12.8	3.2	chr11	57457759	57457946	(77628676)	C	MIR1_Amn	SINE/MIR	(36)	232	11	653744
296	30.8	4.7	4.4	chr11	57458114	57458289	(77628333)	C	L2c	LINE/L2	(47)	3340	3133	653746
12	25.0	0.0	4.3	chr11	57459294	57459340	(77627282)	+	G-rich	Low_complexity	1	47	(0)	653749
15	13.8	7.3	1.2	chr11	57461842	57461897	(77624725)	+	GA-rich	Low_complexity	1	59	(0)	653754
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
511	22.6	0.8	2.4	chr11	59756540	59756666	(75329956)	+	MER5A1	DNA/hAT-Charlie	42	166	(0)	657380
234	21.7	17.8	0.0	chr11	59756676	59756758	(75329864)	+	MIRc	SINE/MIR	48	148	(120)	657381
856	22.2	10.0	4.2	chr11	60169257	60169566	(74917056)	C	LTR18A	LTR/ERVL	(15)	330	1	657992
1723	18.7	1.6	2.5	chr11	60169896	60170210	(74916412)	C	AluJb	SINE/Alu	(0)	312	1	657993
11	21.1	2.5	2.4	chr11	61488670	61488709	(73597913)	+	(CCCTCC)n	Simple_repeat	1	41	(0)	660287
339	33.0	8.6	5.8	chr11	61488730	61489022	(73597600)	C	L2b	LINE/L2	(0)	3375	3074	660288
17	19.7	5.8	0.0	chr11	61489217	61489268	(73597354)	+	(TCCTG)n	Simple_repeat	1	55	(0)	660289
14	21.1	0.0	2.5	chr11	61509724	61509763	(73576859)	+	(GCCCCG)n	Simple_repeat	1	40	(0)	660336
317	25.1	7.0	3.9	chr11	61567148	61567288	(73519334)	+	MIRc	SINE/MIR	44	198	(10)	660427
56	0.0	0.0	0.0	chr11	61595754	61595801	(73490821)	+	(GT)n	Simple_repeat	1	48	(0)	660469
268	22.8	21.0	2.6	chr11	61597028	61597169	(73489453)	+	MIRc	SINE/MIR	19	193	(15)	660473
352	25.4	11.5	2.1	chr11	61597382	61597522	(73489100)	+	MIR3	SINE/MIR	30	185	(23)	660474
1390	15.0	16.9	0.0	chr11	61880756	61881001	(73205621)	C	AluSx1	SINE/Alu	(16)	296	1	660996
1642	18.5	4.2	0.4	chr11	61947964	61948239	(73138383)	+	AluJb	SINE/Alu	1	287	(25)	661146
39	0.0	0.0	0.0	chr11	61972141	61972176	(73114446)	+	(GGAG)n	Simple_repeat	1	36	(0)	661194
445	22.0	14.0	1.4	chr11	62505460	62505602	(72581020)	+	MamRep1879	DNA/hAT-Tip100?	49	212	(4)	662245
1615	12.3	4.5	10.5	chr11	62505906	62506238	(72580384)	+	AluJo	SINE/Alu	1	312	(0)	662246
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
266	25.6	31.2	0.0	chr11	62770563	62770721	(72315901)	C	MIRb	SINE/MIR	(39)	229	3	662765
221	28.3	0.0	1.6	chr11	62771868	62771928	(72314694)	C	MIRc	SINE/MIR	(120)	148	89	662767
359	28.5	5.1	10.9	chr11	62772013	62772233	(72314389)	+	MIRb	SINE/MIR	23	245	(23)	662768
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
814	24.7	5.5	0.8	chr11	63021072	63021312	(72065310)	C	MER102c	DNA/hAT-Charlie	(0)	331	79	663325
27678	8.2	2.7	1.6	chr11	63138670	63140059	(71946563)	+	HUERS-P1-int	LTR/ERV1	1679	3088	(3175)	663444
5406	10.9	6.3	0.9	chr11	63503788	63504636	(71581986)	+	MER4D1	LTR/ERV1	1	898	(2)	663769
934	22.2	0.0	0.0	chr11	63504812	63505000	(71581622)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	663770
208	18.5	8.5	3.6	chr11	63505227	63505282	(71581340)	C	MER5A	DNA/hAT-Charlie	(22)	167	109	663771
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
12	12.6	0.0	3.6	chr11	63919586	63919613	(71167009)	+	G-rich	Low_complexity	1	28	(0)	664648
1834	14.7	3.0	2.7	chr11	63946206	63946504	(71140118)	C	AluJb	SINE/Alu	(12)	300	1	664707
2441	7.4	0.0	1.6	chr11	63975568	63975879	(71110743)	C	AluSx3	SINE/Alu	(4)	307	1	664778
302	29.9	5.4	9.2	chr11	63987246	63987418	(71099204)	C	MIR3	SINE/MIR	(7)	201	36	664800
399	27.3	13.7	2.7	chr11	63987570	63987757	(71098865)	+	MIRb	SINE/MIR	3	214	(54)	664801
12	19.4	0.0	5.1	chr11	63999442	63999480	(71087142)	+	(GCCCC)n	Simple_repeat	1	39	(0)	664826
518	33.9	2.1	5.5	chr11	64088638	64088837	(70997785)	+	MIRb	SINE/MIR	76	268	(0)	664983
24	23.6	3.1	4.0	chr11	64305743	64305838	(70780784)	+	G-rich	Low_complexity	1	99	(0)	665355
772	27.6	1.9	6.2	chr11	64405941	64406114	(70680508)	+	MIR	SINE/MIR	100	262	(0)	665558
467	24.6	9.8	0.7	chr11	64406415	64406553	(70680069)	+	MamRep137	DNA/TcMar-Tigger	343	495	(15)	665561
736	21.6	0.0	0.7	chr11	64447976	64448124	(70638498)	C	MER58B	DNA/hAT-Charlie	(5)	336	189	665648
243	24.8	3.7	2.8	chr11	64559912	64560019	(70526603)	+	L2	LINE/L2	2095	2203	(1216)	665859
12	29.7	3.2	1.5	chr11	64713287	64713349	(70373273)	+	(CGCGCGT)n	Simple_repeat	1	65	(0)	666089
359	24.4	19.2	1.9	chr11	64730312	64730470	(70356152)	+	MIRc	SINE/MIR	9	201	(67)	666121
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
15	14.7	0.0	0.0	chr11	65041184	65041213	(70045409)	+	(GCCCC)n	Simple_repeat	1	30	(0)	666738
13	28.8	0.0	5.7	chr11	65315385	65315454	(69771168)	+	(CGGAGC)n	Simple_repeat	1	70	(0)	667294
204	32.1	5.8	5.8	chr11	65354350	65354435	(69732187)	C	MIRb	SINE/MIR	(59)	209	124	667384
67	24.2	1.5	5.7	chr11	65524835	65525093	(69561529)	+	(CCGCC)n	Simple_repeat	1	263	(0)	667714
516	30.2	16.7	4.6	chr11	65560453	65560976	(69525646)	C	L2c	LINE/L2	(775)	2644	2045	667769
488	31.3	5.6	0.0	chr11	65561183	65561450	(69525172)	C	LTR33	LTR/ERVL	(231)	284	1	667770
15	14.6	2.4	4.7	chr11	65589756	65589797	(69496825)	+	(CCAGCC)n	Simple_repeat	1	43	(0)	667816
2172	10.3	0.0	0.3	chr11	65642902	65643214	(69443408)	C	AluSg	SINE/Alu	(0)	310	1	667885
430	34.7	10.7	1.8	chr11	65643443	65643832	(69442790)	C	L2b	LINE/L2	(2)	3373	2945	667886
240	26.7	12.5	6.2	chr11	66050166	66050339	(69036283)	+	MIRc	SINE/MIR	10	203	(65)	668731
832	21.2	9.6	0.5	chr11	66236032	66236230	(68850392)	+	MER20	DNA/hAT-Charlie	1	219	(0)	669097
651	27.9	6.5	1.0	chr11	66269645	66269847	(68816775)	+	MIRb	SINE/MIR	34	248	(20)	669150
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
547	29.9	9.6	5.7	chr11	66476700	66477130	(68609492)	C	L2c	LINE/L2	(19)	3407	2932	669600
479	27.9	13.6	0.5	chr11	66477303	66477500	(68609122)	C	MIRb	SINE/MIR	(1)	267	40	669601
343	27.2	10.2	1.7	chr11	66491895	66492010	(68594612)	C	MIR	SINE/MIR	(23)	239	113	669633
359	26.6	1.9	6.0	chr11	66546597	66546744	(68539878)	C	MIRb	SINE/MIR	(64)	166	28	669759
390	34.5	13.4	3.3	chr11	67055981	67056280	(68030342)	+	L2c	LINE/L2	3014	3348	(39)	670829
490	32.4	11.3	2.2	chr11	67346376	67346832	(67739790)	+	L2	LINE/L2	2120	2623	(796)	671473
203	24.6	4.2	4.2	chr11	67391620	67391691	(67694931)	C	MIRc	SINE/MIR	(184)	84	13	671564
13	21.7	2.6	0.0	chr11	67391937	67391974	(67694648)	+	G-rich	Low_complexity	1	39	(0)	671565
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
330	24.6	11.0	0.8	chr11	67644319	67644449	(67442173)	+	MamGypLTR3a	LTR/Gypsy	836	981	(0)	672024
31	0.0	0.0	0.0	chr11	67644733	67644759	(67441863)	+	(CA)n	Simple_repeat	1	27	(0)	672025
2491	11.4	3.4	15.1	chr11	67671456	67671548	(67415074)	+	MER4A1	LTR/ERV1	1	90	(382)	672067
1943	15.1	0.3	0.0	chr11	68118160	68118457	(66968165)	+	AluJb	SINE/Alu	1	299	(13)	672792
408	28.8	12.9	7.8	chr11	68843287	68843681	(66242941)	C	L1M5	LINE/L1	(310)	5814	5397	674062
2277	29.0	0.7	0.5	chr11	68877484	68878073	(66208549)	C	MER4B-int	LTR/ERV1	(2772)	3986	3396	674136
14	15.2	2.5	4.9	chr11	69049034	69049073	(66037549)	+	(GGC)n	Simple_repeat	1	41	(0)	674461
275	27.6	4.5	6.6	chr11	69915629	69915764	(65170858)	+	MIRb	SINE/MIR	5	137	(131)	675949
228	33.7	2.1	4.2	chr11	69918652	69918747	(65167875)	+	MIRb	SINE/MIR	15	108	(160)	675958
243	25.0	14.0	1.1	chr11	70161382	70161474	(64925148)	+	MIRc	SINE/MIR	27	133	(135)	676356
12	21.7	0.0	0.0	chr11	70398462	70398493	(64688129)	+	G-rich	Low_complexity	1	32	(0)	676805
11	27.7	0.0	0.0	chr11	70398499	70398537	(64688085)	+	(GGACCC)n	Simple_repeat	1	39	(0)	676806
411	33.9	7.6	1.2	chr11	70647456	70647628	(64438994)	+	MIR	SINE/MIR	60	244	(18)	677150
1979	17.3	6.4	1.2	chr11	71116653	71117016	(63969606)	+	MSTB	LTR/ERVL-MaLR	1	390	(36)	677736
2263	11.6	0.0	0.0	chr11	71117017	71117319	(63969303)	C	AluSq2	SINE/Alu	(10)	303	1	677737
21	4.0	0.0	0.0	chr11	71253537	71253562	(63833060)	+	(GT)n	Simple_repeat	1	26	(0)	677940
297	28.7	7.9	6.0	chr11	71254059	71254243	(63832379)	C	MamRep1879	DNA/hAT-Tip100?	(27)	189	1	677942
192	29.8	9.6	7.8	chr11	71255927	71256130	(63830492)	+	Tigger19b	DNA/TcMar-Tigger	153	360	(190)	677945
728	26.9	3.1	5.2	chr11	71256223	71256548	(63830074)	+	LTR16E1	LTR/ERVL	220	538	(0)	677946
490	28.3	8.5	1.7	chr11	71343844	71344019	(63742603)	+	MIRb	SINE/MIR	26	214	(54)	678095
448	33.3	5.3	0.0	chr11	71374116	71374313	(63712309)	C	LTR67B	LTR/ERVL	(0)	620	412	678151
1537	27.2	1.8	6.7	chr11	71483646	71484210	(63602412)	+	L1MB7	LINE/L1	5597	6134	(50)	678333
13	24.8	0.0	0.0	chr11	72240331	72240368	(62846254)	+	(TCCGCAC)n	Simple_repeat	1	38	(0)	679596
588	15.3	21.1	0.0	chr11	72794410	72794540	(62292082)	C	AluJr	SINE/Alu	(10)	302	137	680602
337	31.4	8.1	1.2	chr11	72813752	72813912	(62272710)	+	L2c	LINE/L2	2975	3150	(237)	680655
12	23.1	3.7	3.6	chr11	73228182	73228235	(61858387)	+	G-rich	Low_complexity	1	56	(0)	681435
13	15.3	7.7	5.7	chr11	73242602	73242666	(61843956)	+	(CCCACTC)n	Simple_repeat	1	70	(0)	681465
17	24.2	3.3	1.6	chr11	73982235	73982294	(61104328)	+	A-rich	Low_complexity	1	62	(0)	683163
2071	11.7	3.9	0.0	chr11	73982305	73982603	(61104019)	+	AluSx1	SINE/Alu	1	311	(1)	683164
545	24.9	7.0	6.1	chr11	74493875	74494088	(60592534)	C	L2a	LINE/L2	(5)	3421	3206	684202
537	25.6	15.2	2.4	chr11	75192257	75192468	(59894154)	C	L2a	LINE/L2	(1)	3425	3182	685516
33	16.0	4.6	2.2	chr11	75351690	75351806	(59734816)	+	(CCCGCTC)n	Simple_repeat	1	119	(0)	685854
27	15.2	0.0	0.0	chr11	75351828	75351872	(59734750)	+	(GT)n	Simple_repeat	1	45	(0)	685855
226	33.8	9.2	0.0	chr11	75432510	75432648	(59653974)	+	L3	LINE/CR1	3825	3977	(122)	686044
17	17.8	4.4	0.0	chr11	75433220	75433265	(59653357)	+	GA-rich	Low_complexity	1	48	(0)	686045
350	23.4	14.6	0.9	chr11	75445820	75445931	(59640691)	+	MIRb	SINE/MIR	122	251	(17)	686064
1726	13.1	9.8	0.4	chr11	75531906	75532172	(59554450)	+	AluSz6	SINE/Alu	1	295	(17)	686274
266	22.3	17.5	2.1	chr11	76206122	76206217	(58880405)	C	MIRb	SINE/MIR	(71)	197	84	687527
16	22.6	4.2	4.0	chr11	76235170	76235241	(58851381)	+	(CCCAGCT)n	Simple_repeat	1	75	(0)	687580
675	1.3	0.0	0.0	chr11	76235513	76235587	(58851035)	+	tRNA-Pro-CCY	tRNA	1	75	(0)	687581
16	17.7	1.7	6.8	chr11	76860858	76860921	(58225701)	+	(GGCCG)n	Simple_repeat	1	60	(0)	688820
16	13.1	0.0	5.4	chr11	76860956	76860992	(58225630)	+	(GGC)n	Simple_repeat	1	37	(0)	688821
12	17.6	4.0	5.8	chr11	77040151	77040200	(58046422)	+	(GCACGCT)n	Simple_repeat	1	52	(0)	689144
12	22.4	0.0	2.6	chr11	77473245	77473282	(57613340)	+	(CCGCC)n	Simple_repeat	1	38	(0)	689963
12	21.4	2.1	4.2	chr11	78022687	78022733	(57063889)	+	G-rich	Low_complexity	1	48	(0)	691139
14	15.0	5.4	0.0	chr11	78023094	78023130	(57063492)	+	G-rich	Low_complexity	1	39	(0)	691140
5958	5.7	4.8	1.3	chr11	78041320	78042070	(57044552)	+	LTR17	LTR/ERV1	1	778	(2)	691206
26	25.5	2.4	5.5	chr11	78417750	78417873	(56668749)	+	(GCGCGG)n	Simple_repeat	1	127	(0)	691989
18	16.3	2.9	0.0	chr11	79241711	79241745	(55844877)	+	(TG)n	Simple_repeat	1	36	(0)	693529
936	29.2	11.1	1.5	chr11	79427226	79427705	(55658917)	+	L1ME4a	LINE/L1	5591	6122	(2)	693916
16	20.7	0.0	0.0	chr11	79428022	79428060	(55658562)	+	GA-rich	Low_complexity	1	39	(0)	693917
675	18.7	4.3	2.5	chr11	79428078	79428236	(55658386)	+	MER5A1	DNA/hAT-Charlie	4	165	(1)	693918
335	26.8	4.0	0.0	chr11	80607723	80607819	(54478803)	+	MIR	SINE/MIR	92	192	(70)	696036
345	31.2	1.4	2.0	chr11	86674306	86674452	(48412170)	+	Tigger15a	DNA/TcMar-Tigger	67	212	(503)	705918
613	28.6	7.2	8.7	chr11	86674565	86674714	(48411908)	C	MLT1J	LTR/ERVL-MaLR	(131)	381	230	705919
900	16.0	0.0	0.0	chr11	86674715	86674845	(48411777)	C	AluJo	SINE/Alu	(181)	131	1	705920
387	29.4	9.9	1.2	chr11	86924522	86924686	(48161936)	+	MIRb	SINE/MIR	22	202	(66)	706319
549	32.0	1.1	0.0	chr11	86956549	86956726	(48129896)	+	MIRb	SINE/MIR	72	251	(17)	706371
3223	26.7	9.5	4.5	chr11	89327824	89328656	(45757966)	+	L1MEc	LINE/L1	36	871	(5529)	709879
14155	14.3	4.7	1.7	chr11	91770904	91774706	(43311916)	C	L1M1	LINE/L1	(3188)	4377	11	713202
14	22.6	3.8	1.8	chr11	92224914	92224966	(42861656)	+	(CCTCT)n	Simple_repeat	1	55	(0)	713864
16	0.0	0.0	0.0	chr11	92224981	92225000	(42861622)	+	(CGG)n	Simple_repeat	1	20	(0)	713865
13	8.1	3.9	0.0	chr11	92226891	92226916	(42859706)	+	(CCTCT)n	Simple_repeat	1	27	(0)	713866
620	37.4	7.2	7.0	chr11	93116559	93116650	(41969972)	+	LTR88a	LTR/Gypsy?	357	435	(381)	715151
2187	10.7	3.8	0.0	chr11	93116651	93116978	(41969644)	+	MER61A	LTR/ERV1	1	341	(0)	715152
3040	17.0	13.1	1.5	chr11	93116980	93117654	(41968968)	+	MER4CL34	LTR/ERV1	1	765	(0)	715153
2087	8.2	0.0	12.9	chr11	93661104	93661445	(41425177)	C	AluJb	SINE/Alu	(14)	298	1	715957
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
198	29.7	12.9	0.0	chr11	94152768	94152868	(40933754)	C	MIR3	SINE/MIR	(62)	146	31	716747
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
2163	13.9	11.0	4.5	chr11	94624502	94624900	(40461722)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	717432
1941	26.2	2.3	1.5	chr11	94624901	94625150	(40461472)	+	LTR16B1	LTR/ERVL	229	480	(0)	717431
40	12.2	0.0	0.0	chr11	94741202	94741265	(40345357)	+	(GTGT)n	Simple_repeat	1	64	(0)	717601
33	21.4	0.0	0.0	chr11	94741266	94741272	(40345350)	+	(CGTGTG)n	Simple_repeat	2	72	(0)	717602
12	14.6	0.0	5.9	chr11	95067931	95067964	(40018658)	+	(CTCGGT)n	Simple_repeat	1	34	(0)	718068
18	16.8	0.0	2.4	chr11	95090163	95090204	(39996418)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	718110
320	26.1	14.3	0.7	chr11	95090651	95090806	(39995816)	C	MIRc	SINE/MIR	(93)	175	1	718111
15	4.3	4.2	0.0	chr11	96156274	96156297	(38930325)	+	(CCT)n	Simple_repeat	1	25	(0)	719718
221	30.9	3.5	0.0	chr11	96191920	96192003	(38894619)	+	L3	LINE/CR1	3953	4039	(60)	719776
16	13.2	0.0	0.0	chr11	96605991	96606015	(38480607)	+	(T)n	Simple_repeat	1	25	(0)	720310
1250	12.3	0.0	0.0	chr11	98527128	98527289	(36559333)	C	AluSg4	SINE/Alu	(23)	287	126	722629
2195	12.6	0.0	0.3	chr11	98527293	98527594	(36559028)	C	AluY	SINE/Alu	(9)	302	2	722630
569	34.4	2.8	4.5	chr11	100394995	100395216	(34691406)	+	MER115	DNA/hAT-Tip100	149	366	(327)	724978
12	12.6	3.7	0.0	chr11	102111432	102111458	(32975164)	+	(TTCC)n	Simple_repeat	1	28	(0)	727407
1274	33.9	3.9	2.8	chr11	105482043	105482607	(29604015)	+	L2	LINE/L2	1005	1575	(1844)	732256
20	20.3	4.5	5.4	chr11	107018505	107018592	(28068030)	+	(TCCC)n	Simple_repeat	1	92	(0)	734327
22	3.9	0.0	0.0	chr11	107929486	107929512	(27157110)	+	(GT)n	Simple_repeat	1	27	(0)	735864
192	31.4	0.0	0.0	chr11	108008683	108008733	(27077889)	C	L2c	LINE/L2	(7)	3380	3330	736036
551	24.4	20.2	6.0	chr11	110185620	110185954	(24900668)	C	LTR79	LTR/ERVL	(53)	474	80	739395
38	4.8	0.0	0.0	chr11	111913202	111913245	(23173377)	+	(CCT)n	Simple_repeat	1	44	(0)	742184
13	20.2	6.7	3.1	chr11	111913391	111913450	(23173172)	+	(CCTGCCT)n	Simple_repeat	1	64	(0)	742185
13	0.0	0.0	0.0	chr11	111977581	111977597	(23109025)	+	(CGC)n	Simple_repeat	1	17	(0)	742322
24540	6.5	0.6	0.3	chr11	112005935	112011965	(23074657)	+	L1PA6	LINE/L1	125	6154	(0)	742376
19	21.3	2.2	5.0	chr11	112612405	112612479	(22474143)	+	G-rich	Low_complexity	1	72	(0)	743394
317	17.3	17.4	0.0	chr11	112823003	112823083	(22263539)	C	UCON88	Unknown	(0)	112	15	743705
351	25.3	0.0	11.2	chr11	114482104	114482210	(20604412)	C	L2c	LINE/L2	(14)	3373	3279	746350
294	32.5	6.4	1.7	chr11	114482258	114482376	(20604246)	C	MamSINE1	SINE/tRNA-RTE	(160)	130	6	746351
552	27.4	8.5	5.8	chr11	114952105	114952344	(20134278)	C	MIRb	SINE/MIR	(0)	268	22	746953
34	0.0	0.0	0.0	chr11	114952428	114952458	(20134164)	+	(TGT)n	Simple_repeat	1	31	(0)	746954
645	27.7	7.6	7.6	chr11	115313585	115313900	(19772722)	+	MLT1J1	LTR/ERVL-MaLR	7	322	(122)	747471
435	34.7	5.5	1.2	chr11	115694964	115695135	(19391487)	+	MIRb	SINE/MIR	21	200	(68)	748096
968	21.4	0.6	1.6	chr11	115741880	115742064	(19344558)	+	MER5A	DNA/hAT-Charlie	2	184	(5)	748175
462	22.7	0.0	3.6	chr11	116130353	116130489	(18956133)	+	UCON70	Unknown	121	252	(4)	748746
387	31.8	13.9	1.8	chr11	117601438	117601658	(17484964)	+	MamTip2	DNA/hAT-Tip100	1	252	(53)	751421
471	31.3	1.5	0.0	chr11	117720994	117721124	(17365498)	C	MIRb	SINE/MIR	(76)	192	60	751645
188	33.3	2.7	1.4	chr11	117721148	117721220	(17365402)	C	MIRb	SINE/MIR	(1)	267	194	751646
321	34.8	5.0	6.2	chr11	117721235	117721540	(17365082)	C	L3	LINE/CR1	(168)	3931	3630	751647
953	35.9	3.9	2.5	chr11	117723621	117724174	(17362448)	C	L3	LINE/CR1	(1308)	2791	2230	751647
927	20.9	6.8	0.9	chr11	117724517	117724738	(17361884)	+	UCON6	Unknown	52	287	(150)	751653
16	17.9	8.8	4.0	chr11	117876847	117876914	(17209708)	+	(CT)n	Simple_repeat	1	74	(0)	751892
18	29.9	0.0	0.0	chr11	117986112	117986158	(17100464)	+	(CA)n	Simple_repeat	1	47	(0)	752104
180	28.4	2.2	12.0	chr11	118572963	118573062	(16513560)	C	Penelope1_Vert	LINE/Penelope	(139)	948	859	753162
8260	9.4	11.0	0.1	chr11	118688241	118689538	(16397084)	C	LTR12C	LTR/ERV1	(121)	1458	3	753355
13	14.7	8.5	2.0	chr11	119195744	119195790	(15890832)	+	(ATCCCTC)n	Simple_repeat	1	51	(0)	754415
18	6.7	0.0	5.7	chr11	119205984	119206018	(15880604)	+	(CCGCC)n	Simple_repeat	1	35	(0)	754441
37	0.0	0.0	0.0	chr11	119206290	119206323	(15880299)	+	(CGG)n	Simple_repeat	1	34	(0)	754442
25	15.6	0.0	1.9	chr11	119334698	119334749	(15751873)	+	(CGACC)n	Simple_repeat	1	52	(0)	754708
675	20.5	1.9	7.3	chr11	119374797	119374975	(15711647)	+	MIRb	SINE/MIR	51	225	(43)	754759
1965	22.9	7.2	9.4	chr11	119590383	119591118	(15495504)	C	MER21C	LTR/ERVL	(132)	806	9	755137
13	13.5	0.0	7.9	chr11	120107357	120107394	(14979228)	+	(CCTC)n	Simple_repeat	1	38	(0)	755976
11	24.9	0.0	2.5	chr11	120210851	120210890	(14875732)	+	(GCCCCC)n	Simple_repeat	1	40	(0)	756149
20	23.5	1.6	1.6	chr11	120240182	120240243	(14846379)	+	(GCGGCG)n	Simple_repeat	1	63	(0)	756205
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
1400	32.2	12.2	2.4	chr11	120549982	120551209	(14535413)	C	L2c	LINE/L2	(537)	2882	1519	756746
521	33.6	3.3	2.1	chr11	122202004	122202240	(12884382)	C	MIRc	SINE/MIR	(2)	266	27	759239
8066	19.3	2.9	3.0	chr11	122297861	122299508	(12787114)	C	MSTB-int	LTR/ERVL-MaLR	(5)	1646	1	759402
417	30.1	4.5	2.0	chr11	122356036	122356188	(12730434)	C	MIR	SINE/MIR	(79)	183	24	759484
577	24.7	24.4	2.6	chr11	122486855	122487356	(12599266)	+	LTR50	LTR/ERVL	120	766	(29)	759649
2171	16.5	6.5	0.3	chr11	122769025	122769413	(12317209)	C	MSTB1	LTR/ERVL-MaLR	(3)	429	15	760216
18	13.2	2.2	4.3	chr11	123040665	123040709	(12045913)	+	(TTTA)n	Simple_repeat	1	46	(0)	760690
736	10.9	1.8	0.0	chr11	123040710	123040819	(12045803)	C	AluSx3	SINE/Alu	(2)	309	198	760691
390	28.4	6.7	7.8	chr11	123040958	123041037	(12045585)	C	MamRep4096	DNA/hAT-Tip100	(27)	399	319	760692
228	31.2	0.0	2.4	chr11	123211678	123211759	(11874863)	+	UCON55	DNA/TcMar-Tigger	36	115	(77)	761088
293	32.9	11.6	5.3	chr11	123475555	123475820	(11610802)	C	L3b	LINE/CR1	(264)	4968	4684	761635
365	30.4	4.5	3.5	chr11	123532312	123532485	(11554137)	C	MLT1I	LTR/ERVL-MaLR	(234)	177	2	761737
23	21.9	0.0	5.3	chr11	123550368	123550443	(11536179)	+	(CACACT)n	Simple_repeat	1	76	(0)	761774
1462	16.8	7.2	1.7	chr11	123746027	123746374	(11340248)	C	MER4CL34	LTR/ERV1	(0)	872	407	762096
765	13.5	0.0	5.7	chr11	123746404	123746544	(11340078)	C	MER4CL34	LTR/ERV1	(631)	134	2	762096
12	25.6	0.0	0.0	chr11	124876298	124876334	(10210288)	+	G-rich	Low_complexity	1	37	(0)	763704
1537	12.4	0.9	0.0	chr11	124945686	124945894	(10140728)	+	AluSx3	SINE/Alu	86	296	(15)	763802
282	28.9	5.2	1.5	chr11	124946137	124946266	(10140356)	C	MLT1L	LTR/ERVL-MaLR	(22)	588	454	763803
1941	13.2	0.0	0.0	chr11	125568869	125569134	(9517488)	C	AluSg	SINE/Alu	(26)	284	19	764749
316	32.3	3.5	3.5	chr11	125999356	125999528	(9087094)	+	MIRb	SINE/MIR	23	195	(73)	765354
277	35.3	5.6	9.1	chr11	126440638	126440955	(8645667)	C	L2c	LINE/L2	(0)	3387	3082	766096
499	23.9	6.1	0.7	chr11	126581956	126582094	(8504528)	C	MIRc	SINE/MIR	(102)	166	20	766319
225	33.9	0.0	1.9	chr11	126582127	126582232	(8504390)	+	MIR3	SINE/MIR	76	175	(55)	766320
2553	9.0	0.7	0.0	chr11	128610051	128610360	(6476262)	+	AluSx	SINE/Alu	1	312	(0)	769145
12	22.7	0.0	0.0	chr11	128685061	128685092	(6401530)	+	GA-rich	Low_complexity	1	32	(0)	769241
13	4.3	3.9	3.7	chr11	128890657	128890682	(6195940)	+	(CGC)n	Simple_repeat	1	27	(0)	769532
712	29.3	16.6	3.5	chr11	129282722	129283426	(5803196)	+	L2a	LINE/L2	2230	3044	(375)	770085
375	21.2	9.0	1.5	chr11	129283466	129283599	(5803023)	+	L2a	LINE/L2	3199	3343	(83)	770085
256	29.4	8.9	0.0	chr11	129569027	129569128	(5517494)	C	L1ME3A	LINE/L1	(125)	6048	5937	770491
911	30.6	11.8	2.7	chr11	129846523	129847076	(5239546)	C	L2a	LINE/L2	(0)	3426	2811	770889
3074	16.7	3.3	1.0	chr11	130323629	130324136	(4762486)	+	MLT2B1	LTR/ERVL	1	520	(0)	771710
800	17.1	5.4	10.3	chr11	130404246	130404382	(4682240)	+	MER5A	DNA/hAT-Charlie	5	140	(49)	771867
1375	18.1	11.5	1.0	chr11	130431776	130432077	(4654545)	+	MER58B	DNA/hAT-Charlie	4	341	(0)	771908
361	12.8	4.7	0.0	chr11	130635500	130635566	(4451056)	+	L1MB3	LINE/L1	6070	6139	(44)	772197
819	13.5	0.0	0.0	chr11	130635570	130635680	(4450942)	C	AluSx	SINE/Alu	(183)	129	19	772198
2297	30.2	11.5	3.8	chr11	131839262	131841037	(3245585)	C	L2a	LINE/L2	(168)	3258	1315	773883
24	23.7	4.0	3.8	chr11	131910732	131910832	(3175790)	+	(GCC)n	Simple_repeat	1	105	(0)	773989
196	30.2	1.0	6.8	chr11	132422918	132423020	(2663602)	+	MIR3	SINE/MIR	89	185	(23)	774585
624	21.8	10.1	0.6	chr11	132919266	132919436	(2167186)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	775235
272	31.1	7.7	9.0	chr11	132919695	132919839	(2166783)	+	L2a	LINE/L2	3243	3424	(2)	775236
547	38.3	4.3	2.2	chr11	132973289	132973828	(2112794)	+	L2	LINE/L2	940	1491	(1928)	775311
213	33.6	11.7	5.2	chr11	132974014	132974396	(2112226)	+	L2	LINE/L2	1593	2003	(1416)	775311
635	25.6	1.2	0.6	chr11	133553102	133553266	(1533356)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	776083
301	31.3	16.0	1.8	chr11	133553271	133553436	(1533186)	C	L3	LINE/CR1	(71)	4028	3835	776084
17	5.0	0.0	0.0	chr11	133576055	133576075	(1510547)	+	(T)n	Simple_repeat	1	21	(0)	776113
349	30.1	3.5	3.0	chr11	133653719	133653886	(1432736)	C	Mam_R4	LINE/Dong-R4	(206)	3603	3435	776205
300	20.5	14.6	7.4	chr11	133787629	133787723	(1298899)	C	MER5B	DNA/hAT-Charlie	(4)	174	72	776381
18	18.3	1.6	6.2	chr11	134037391	134037453	(1049169)	+	G-rich	Low_complexity	1	64	(0)	776694
353	24.1	3.5	1.8	chr11	134037532	134037645	(1048977)	C	MIR3	SINE/MIR	(6)	202	87	776695
41	0.0	0.0	0.0	chr11	134411671	134411705	(674917)	+	(CA)n	Simple_repeat	1	35	(0)	777184
13	16.2	0.0	0.0	chr11	134978601	134978628	(107994)	+	GA-rich	Low_complexity	1	28	(0)	777881
803	16.4	3.8	0.0	chr12	167598	167725	(133107584)	+	FLAM_C	SINE/Alu	1	133	(10)	778330
352	27.8	13.7	0.0	chr12	167762	167914	(133107395)	C	MIRb	SINE/MIR	(78)	190	7	778331
562	35.5	10.2	3.1	chr12	168069	168385	(133106924)	+	L3b	LINE/CR1	4797	5138	(94)	778332
18	3.2	2.8	5.4	chr12	570670	570705	(132704604)	+	(GCCCTG)n	Simple_repeat	1	37	(0)	778981
568	33.1	9.4	1.6	chr12	1635315	1635560	(131639749)	+	L3	LINE/CR1	3682	3948	(151)	780989
193	30.6	0.0	4.5	chr12	1635811	1635899	(131639410)	C	AmnSINE1	SINE/5S-Deu-L2	(441)	134	50	780990
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
2085	9.9	0.3	0.0	chr12	2854031	2854324	(130420985)	C	AluSp	SINE/Alu	(18)	295	1	782783
2299	4.9	0.0	0.0	chr12	2945004	2945269	(130330040)	+	AluYk4	SINE/Alu	46	311	(0)	782979
257	32.1	5.2	3.5	chr12	2958568	2958680	(130316629)	+	L2c	LINE/L2	3271	3385	(2)	783019
20	21.7	4.3	5.1	chr12	2959652	2959745	(130315564)	+	(TCGCTCC)n	Simple_repeat	1	98	(0)	783022
17	3.4	6.7	0.0	chr12	2959797	2959826	(130315483)	+	(CTCCG)n	Simple_repeat	1	32	(0)	783023
215	30.2	1.1	4.4	chr12	3084702	3084791	(130190518)	C	MIRb	SINE/MIR	(70)	198	112	783289
202	20.5	3.6	1.8	chr12	3320063	3320119	(129955190)	+	MIRc	SINE/MIR	109	171	(59)	783643
1202	23.0	8.8	0.8	chr12	3320199	3320553	(129954756)	+	MER88	LTR/ERVL	1	386	(78)	783644
711	26.3	12.0	1.0	chr12	3432955	3433250	(129842059)	C	L1ME3Cz	LINE/L1	(595)	402	70	783831
16	8.5	0.0	0.0	chr12	3491288	3491312	(129783997)	+	(CCG)n	Simple_repeat	1	25	(0)	783927
384	34.0	7.5	2.9	chr12	3753656	3753961	(129521348)	+	L2c	LINE/L2	2918	3224	(202)	784356
12	16.4	5.9	0.0	chr12	3873171	3873204	(129402105)	+	(CCCCG)n	Simple_repeat	1	36	(0)	784521
714	27.2	1.1	0.0	chr12	5037778	5037950	(128237359)	C	MER5A	DNA/hAT-Charlie	(5)	184	10	786452
217	31.8	1.8	5.1	chr12	5071587	5071701	(128203608)	+	MIRc	SINE/MIR	9	122	(108)	786508
259	33.2	6.1	0.0	chr12	5307947	5308065	(127967244)	C	MIR	SINE/MIR	(135)	133	2	786838
19	27.0	4.0	3.9	chr12	6342045	6342144	(126933165)	+	GA-rich	Low_complexity	1	104	(0)	788509
309	33.6	6.8	10.2	chr12	6342300	6342544	(126932765)	+	MIR	SINE/MIR	10	245	(17)	788510
355	28.5	9.7	4.2	chr12	6342750	6342914	(126932395)	+	MIRc	SINE/MIR	63	237	(31)	788511
287	27.9	11.4	2.0	chr12	6377009	6377158	(126898151)	C	L2c	LINE/L2	(175)	3212	3047	788586
258	36.4	3.5	1.4	chr12	6377301	6377442	(126897867)	C	MIR3	SINE/MIR	(62)	146	2	788587
1529	11.5	6.9	0.0	chr12	6540809	6541025	(126734284)	+	AluSg	SINE/Alu	1	233	(77)	788912
1610	10.7	9.0	0.0	chr12	6566975	6567217	(126708092)	C	AluSq2	SINE/Alu	(14)	299	33	788952
199	33.3	3.0	2.0	chr12	6567222	6567319	(126707990)	+	MIRb	SINE/MIR	154	252	(16)	788953
13	4.2	8.0	0.0	chr12	6603352	6603376	(126671933)	+	(CTCC)n	Simple_repeat	1	27	(0)	789021
33	0.0	0.0	0.0	chr12	6617995	6618022	(126657287)	+	(AC)n	Simple_repeat	1	28	(0)	789037
40	7.7	0.0	0.0	chr12	6778328	6778382	(126496927)	+	(CCGGAG)n	Simple_repeat	1	55	(0)	789363
192	29.1	0.4	0.6	chr12	6817645	6818185	(126457124)	+	(CA)n	Simple_repeat	1	543	(0)	789468
393	27.4	12.7	0.0	chr12	6890867	6890990	(126384319)	C	MIRb	SINE/MIR	(70)	198	57	789581
56	3.5	0.0	0.0	chr12	6936717	6936775	(126338534)	+	(CAG)n	Simple_repeat	1	59	(0)	789667
11	20.9	0.0	10.0	chr12	7130721	7130780	(126144529)	+	G-rich	Low_complexity	1	60	(0)	789995
1984	15.6	6.8	5.0	chr12	7411346	7411763	(125863546)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	790362
1002	12.5	0.0	0.0	chr12	8663103	8663238	(124612071)	C	AluSq2	SINE/Alu	(1)	312	177	792668
23081	12.4	1.8	0.7	chr12	9170009	9176475	(124098834)	+	L1PA11	LINE/L1	12	7607	(2)	793511
209	36.3	6.6	3.4	chr12	9378851	9379084	(123896225)	C	L2c	LINE/L2	(35)	3352	3111	793766
2511	22.1	3.1	0.7	chr12	10277960	10278528	(122996781)	+	HERVL40-int	LTR/ERVL	3438	4020	(1510)	795038
2376	9.7	1.3	0.0	chr12	10674473	10674780	(122600529)	+	AluSx1	SINE/Alu	1	312	(0)	795512
12	21.0	5.0	4.8	chr12	10723235	10723294	(122552015)	+	(GCGGCT)n	Simple_repeat	1	63	(0)	795577
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
216	23.1	3.0	3.0	chr12	11830273	11830339	(121444970)	C	MIRc	SINE/MIR	(11)	257	191	797066
241	29.1	14.3	1.1	chr12	11830342	11830522	(121444787)	+	MIRc	SINE/MIR	20	228	(40)	797067
344	27.0	5.7	1.7	chr12	12017210	12017326	(121257983)	C	UCON31	Unknown	(266)	188	67	797367
588	26.0	6.1	3.4	chr12	12268096	12268302	(121007007)	C	MIRc	SINE/MIR	(37)	231	19	797794
2473	8.7	0.0	1.6	chr12	12268475	12268786	(121006523)	+	AluSx3	SINE/Alu	1	307	(4)	797795
5024	25.0	5.8	4.5	chr12	12275631	12275919	(120999390)	+	L1M4	LINE/L1	10	305	(7212)	797817
2678	13.9	3.5	0.7	chr12	12275920	12276333	(120998976)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	797818
919	18.6	14.0	1.8	chr12	12611260	12611484	(120663825)	C	L1MB7	LINE/L1	(381)	5803	5547	798437
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
22	19.7	0.0	0.0	chr12	12726157	12726198	(120549111)	+	A-rich	Low_complexity	1	42	(0)	798637
194	32.1	4.7	0.0	chr12	12786644	12786724	(120488585)	C	MIRc	SINE/MIR	(87)	181	97	798776
16	0.0	0.0	0.0	chr12	12891840	12891856	(120383453)	+	(T)n	Simple_repeat	1	17	(0)	799008
23959	9.1	0.6	0.8	chr12	13261284	13265117	(120010192)	C	HERVH-int	LTR/ERV1	(3720)	3993	1	799603
777	32.6	5.2	8.3	chr12	13385874	13386308	(119889001)	+	MER115	DNA/hAT-Tip100	29	449	(244)	799786
310	31.6	13.2	3.9	chr12	13967588	13967896	(119307413)	C	L2b	LINE/L2	(18)	3357	3016	800577
481	21.5	4.0	1.6	chr12	14384044	14384166	(118891143)	C	L1MC5	LINE/L1	(13)	9291	9166	801293
5933	16.7	7.8	2.0	chr12	15527066	15528234	(117747075)	+	L1M3f	LINE/L1	1254	2491	(4074)	802936
17	20.8	3.4	3.3	chr12	15789446	15789504	(117485805)	+	(CGAG)n	Simple_repeat	1	61	(0)	803291
1754	27.2	2.0	1.6	chr12	17235879	17236326	(116038983)	C	LTR16B	LTR/ERVL	(13)	450	1	805250
2110	16.7	3.3	4.6	chr12	17342346	17342900	(115932409)	C	MLT2A2	LTR/ERVL	(0)	554	1	805404
15	22.4	6.4	0.0	chr12	19129671	19129717	(114145592)	+	(GC)n	Simple_repeat	1	50	(0)	807583
19	14.3	4.2	2.0	chr12	19129701	19129748	(114145561)	+	(GCTC)n	Simple_repeat	1	50	(0)	807584
18	17.2	0.0	2.4	chr12	19129747	19129787	(114145522)	+	(CGG)n	Simple_repeat	1	41	(0)	807585
12	24.0	4.5	0.0	chr12	19129909	19129952	(114145357)	+	G-rich	Low_complexity	1	46	(0)	807586
3831	19.0	1.9	1.9	chr12	19600691	19601488	(113673821)	+	MLT1A0-int	LTR/ERVL-MaLR	1	798	(937)	808496
12	19.3	4.7	2.2	chr12	24562109	24562151	(108713158)	+	(CCACCTC)n	Simple_repeat	1	45	(0)	815078
617	31.4	8.0	7.8	chr12	26112435	26112896	(107162413)	C	L2a	LINE/L2	(17)	3409	2947	817527
752	21.8	3.2	3.2	chr12	27276080	27276297	(105999012)	C	L1MC5	LINE/L1	(1)	9303	9086	819302
408	26.0	6.4	3.0	chr12	27276299	27276433	(105998876)	C	Tigger19b	DNA/TcMar-Tigger	(96)	454	315	819303
288	19.1	5.6	6.7	chr12	27520990	27521079	(105754230)	C	Charlie15a	DNA/hAT-Charlie	(34)	190	102	819692
21	0.0	0.0	0.0	chr12	27525514	27525536	(105749773)	+	(A)n	Simple_repeat	1	23	(0)	819697
254	21.4	10.6	1.2	chr12	29663045	29663129	(103612180)	+	Charlie4z	DNA/hAT-Charlie	28	121	(46)	822664
1612	24.4	4.7	1.6	chr12	29701226	29701658	(103573651)	+	LTR16B	LTR/ERVL	4	450	(13)	822733
646	25.5	6.9	3.1	chr12	30788985	30789207	(102486102)	+	MIR	SINE/MIR	1	232	(30)	824189
353	32.2	5.3	2.4	chr12	31220045	31220337	(102054972)	+	MLT1K	LTR/ERVL-MaLR	163	464	(131)	824841
1555	26.5	8.0	5.8	chr12	31506480	31507172	(101768137)	C	MER21C	LTR/ERVL	(101)	837	128	825416
670	24.2	16.4	2.8	chr12	31507183	31507434	(101767875)	C	AluYe6	SINE/Alu	(17)	293	1	825417
2351	7.4	2.3	0.0	chr12	32010228	32010526	(101264783)	+	AluSx3	SINE/Alu	1	306	(5)	826573
2456	7.2	0.0	3.8	chr12	38904461	38904778	(94370531)	C	AluSx4	SINE/Alu	(4)	306	1	831697
3020	9.6	0.2	12.8	chr12	38953015	38953530	(94321779)	C	MLT2A2	LTR/ERVL	(2)	451	1	831761
2382	11.7	1.6	2.5	chr12	41614386	41614752	(91660557)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	835287
11735	8.8	1.3	0.3	chr12	41614753	41616310	(91658999)	+	THE1B-int	LTR/ERVL-MaLR	1	1574	(6)	835287
20	22.9	0.0	0.0	chr12	41774625	41774672	(91500637)	+	(ATAGA)n	Simple_repeat	1	48	(0)	835480
903	14.2	3.3	0.0	chr12	42030495	42030642	(91244667)	+	MER30	DNA/hAT-Charlie	78	230	(0)	835894
644	20.1	4.8	1.4	chr12	42030769	42030909	(91244400)	C	LTR33C	LTR/ERVL	(452)	177	32	835893
1429	18.4	4.1	1.0	chr12	43053018	43053325	(90221984)	+	MER33	DNA/hAT-Charlie	2	319	(5)	837557
2178	12.5	0.0	1.0	chr12	43837332	43837643	(89437666)	C	AluSg	SINE/Alu	(0)	310	2	838636
19	12.8	2.9	0.0	chr12	44877134	44877167	(88398142)	+	GA-rich	Low_complexity	1	35	(0)	840017
12	9.7	0.0	0.0	chr12	44877167	44877188	(88398121)	+	(AAAT)n	Simple_repeat	1	22	(0)	840018
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
20	19.7	2.4	0.0	chr12	47223092	47223133	(86052176)	+	GA-rich	Low_complexity	1	43	(0)	843315
285	35.2	6.5	4.7	chr12	47223278	47223596	(86051713)	C	L2	LINE/L2	(1370)	2049	1725	843312
289	29.4	4.5	0.0	chr12	47827063	47827214	(85448095)	C	L2a	LINE/L2	(5)	3421	3209	844263
12	19.3	4.7	2.2	chr12	47828876	47828918	(85446391)	+	G-rich	Low_complexity	1	45	(0)	844267
21	8.7	3.6	6.9	chr12	47905049	47905104	(85370205)	+	(GCCCC)n	Simple_repeat	1	58	(0)	844402
373	30.0	16.4	1.2	chr12	48106523	48106687	(85168622)	C	MIR3	SINE/MIR	(7)	201	7	844710
12	21.1	2.9	0.0	chr12	48184528	48184561	(85090748)	+	GA-rich	Low_complexity	1	35	(0)	844824
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
901	22.6	1.0	5.1	chr12	48964819	48965033	(84310276)	+	MER58A	DNA/hAT-Charlie	4	209	(15)	846176
21	0.0	0.0	0.0	chr12	49235116	49235131	(84040178)	+	(A)n	Simple_repeat	1	16	(0)	846740
2174	9.7	2.0	1.3	chr12	49235453	49235751	(84039558)	+	AluSx	SINE/Alu	1	301	(11)	846741
262	32.0	4.9	4.0	chr12	49335702	49335802	(83939507)	+	MIR3	SINE/MIR	45	146	(62)	846986
611	29.4	4.0	4.4	chr12	49358470	49358751	(83916558)	C	L3b	LINE/CR1	(483)	3616	3422	847029
1358	25.1	14.5	7.7	chr12	49778146	49778629	(83496680)	+	L2	LINE/L2	268	788	(2631)	847788
15	20.5	2.5	0.0	chr12	49810174	49810213	(83465096)	+	G-rich	Low_complexity	1	41	(0)	847841
12	21.7	0.0	0.0	chr12	49810291	49810322	(83464987)	+	(AGCCC)n	Simple_repeat	1	32	(0)	847842
308	26.9	2.9	9.7	chr12	49810324	49810451	(83464858)	+	MIR3	SINE/MIR	15	135	(133)	847843
1705	18.2	14.8	2.0	chr12	49810476	49810923	(83464386)	+	Charlie1b	DNA/hAT-Charlie	1	515	(8)	847844
331	30.7	10.8	5.7	chr12	49945503	49945923	(83329386)	C	LTR85c	LTR/Gypsy?	(218)	605	161	848122
772	22.7	2.0	3.0	chr12	49945969	49946168	(83329141)	+	MIR	SINE/MIR	31	228	(34)	848123
258	27.7	5.0	0.2	chr12	50032675	50032764	(83242545)	+	MIR	SINE/MIR	24	117	(151)	848284
12	14.0	7.3	2.3	chr12	50167052	50167092	(83108217)	+	(GCCCCCG)n	Simple_repeat	1	44	(0)	848566
202	34.7	11.4	1.6	chr12	51326902	51327027	(81948282)	C	L3b	LINE/CR1	(519)	4713	4574	851135
14	30.6	3.6	2.3	chr12	51327043	51327126	(81948183)	+	(CTCTT)n	Simple_repeat	1	87	(0)	851136
778	15.9	0.0	0.0	chr12	51327143	51327255	(81948054)	C	AluSz6	SINE/Alu	(9)	303	191	851137
13	7.9	4.1	9.8	chr12	51521160	51521208	(81754101)	+	(CTGCCCA)n	Simple_repeat	1	51	(0)	851491
203	33.6	8.9	0.9	chr12	51590369	51590482	(81684827)	C	MIRc	SINE/MIR	(45)	223	100	851611
450	32.3	2.1	2.6	chr12	51911601	51911791	(81363518)	+	MIR3	SINE/MIR	1	190	(18)	852130
18	10.4	0.0	3.0	chr12	52201035	52201074	(81074235)	+	(CCT)n	Simple_repeat	1	38	(0)	852615
1807	18.0	14.4	8.3	chr12	52202193	52202284	(81073025)	+	MLT1D	LTR/ERVL-MaLR	429	504	(1)	852617
438	29.5	4.7	2.3	chr12	52202285	52202358	(81072951)	C	MIRb	SINE/MIR	(173)	95	17	852616
210	29.9	2.2	2.2	chr12	52403291	52403379	(80871930)	C	L2c	LINE/L2	(311)	3076	2988	852906
291	29.4	8.3	0.5	chr12	52403527	52403723	(80871586)	C	MIRb	SINE/MIR	(22)	246	27	852907
21	16.4	0.0	4.4	chr12	52865305	52865349	(80409960)	+	(CA)n	Simple_repeat	1	45	(0)	853545
300	29.2	14.4	4.3	chr12	52903183	52903368	(80371941)	C	MIRb	SINE/MIR	(32)	236	29	853626
12	4.3	8.3	0.0	chr12	52965426	52965449	(80309860)	+	(GAG)n	Simple_repeat	1	26	(0)	853781
196	28.6	4.8	0.0	chr12	52976325	52976422	(80298887)	+	L2c	LINE/L2	3056	3158	(229)	853815
577	16.5	1.9	0.0	chr12	52980002	52980110	(80295199)	+	FLAM_C	SINE/Alu	22	211	(90)	853825
15	7.8	3.7	0.0	chr12	52980111	52980137	(80295172)	+	(TAAA)n	Simple_repeat	1	28	(0)	853826
1730	11.5	8.8	0.4	chr12	52980659	52980928	(80294381)	C	AluSz	SINE/Alu	(16)	296	2	853827
33	16.8	5.0	0.0	chr12	53066320	53066399	(80208910)	+	(CTTCCT)n	Simple_repeat	1	84	(0)	854003
14	13.7	7.5	0.0	chr12	53218771	53218811	(80056498)	+	(CGCCCGC)n	Simple_repeat	1	44	(0)	854281
277	36.9	1.7	1.2	chr12	53241567	53241739	(80033570)	C	L2a	LINE/L2	(266)	3121	2948	854306
221	25.5	11.7	1.0	chr12	53696020	53696118	(79579191)	+	L3b	LINE/CR1	4946	5056	(176)	855292
41	0.0	0.0	0.0	chr12	53755309	53755343	(79519966)	+	(GT)n	Simple_repeat	1	35	(0)	855398
17	3.4	6.7	0.0	chr12	53975455	53975484	(79299825)	+	(TTATT)n	Simple_repeat	1	32	(0)	855723
344	30.6	6.1	3.9	chr12	54201659	54201801	(79073508)	+	MIRc	SINE/MIR	2	156	(112)	856035
13	15.5	9.3	0.0	chr12	54418348	54418390	(78856919)	+	G-rich	Low_complexity	1	47	(0)	856406
239	26.2	9.4	1.9	chr12	54564805	54564916	(78710393)	C	MIRc	SINE/MIR	(154)	114	4	856660
522	26.4	2.0	9.1	chr12	54564917	54565060	(78710249)	+	MIRc	SINE/MIR	125	243	(19)	856661
18	6.2	2.6	5.1	chr12	54590926	54590963	(78684346)	+	(GAGGAGG)n	Simple_repeat	1	39	(0)	856695
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
250	15.4	7.6	0.6	chr12	56931522	56931601	(76343708)	+	MIR3	SINE/MIR	46	137	(131)	860490
1829	19.9	4.2	9.1	chr12	56932050	56932574	(76342735)	+	MLT1D	LTR/ERVL-MaLR	2	499	(6)	860491
13	12.5	0.0	0.0	chr12	57633134	57633159	(75642150)	+	(CGCAG)n	Simple_repeat	1	26	(0)	861598
12	34.2	0.0	1.7	chr12	57726605	57726664	(75548645)	+	(GGT)n	Simple_repeat	1	60	(0)	861754
18	4.2	0.0	0.0	chr12	57737517	57737541	(75537768)	+	(CGG)n	Simple_repeat	1	25	(0)	861766
12	18.3	0.0	3.0	chr12	57754535	57754567	(75520742)	+	(CCTC)n	Simple_repeat	1	33	(0)	861784
14	7.0	2.9	5.7	chr12	57764891	57764924	(75510385)	+	(CTGCCT)n	Simple_repeat	1	35	(0)	861794
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
252	27.1	2.0	4.0	chr12	57782459	57782558	(75492751)	+	MIRc	SINE/MIR	168	265	(3)	861818
2549	7.4	0.0	0.0	chr12	57814941	57815251	(75460058)	C	AluY	SINE/Alu	(0)	311	1	861874
320	30.3	4.4	0.9	chr12	57839220	57839329	(75435980)	+	MIR3	SINE/MIR	20	133	(75)	861906
15	13.7	3.1	0.0	chr12	57844889	57844920	(75430389)	+	(CTCC)n	Simple_repeat	1	33	(0)	861912
27	11.7	0.0	7.7	chr12	57846454	57846518	(75428791)	+	G-rich	Low_complexity	1	65	(0)	861916
2489	3.0	0.0	0.7	chr12	57847423	57847721	(75427588)	+	AluSg7	SINE/Alu	1	297	(12)	861918
9415	13.0	3.6	0.3	chr12	58860121	58861642	(74413667)	C	THE1C-int	LTR/ERVL-MaLR	(7)	1573	1	863333
2396	12.2	3.2	0.3	chr12	58861643	58862005	(74413304)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	863333
13	17.4	0.0	2.9	chr12	59596063	59596096	(73679213)	+	(CGCCTC)n	Simple_repeat	1	34	(0)	864295
21	0.0	5.9	2.8	chr12	59596251	59596284	(73679025)	+	(GGA)n	Simple_repeat	1	36	(0)	864296
747	24.4	1.8	0.6	chr12	62050760	62050920	(71224389)	+	MER63B	DNA/hAT-Blackjack	273	435	(1)	867356
956	18.2	3.7	0.0	chr12	62622353	62622533	(70652776)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	868221
442	31.5	7.1	0.5	chr12	62656209	62656406	(70618903)	+	MIRb	SINE/MIR	54	265	(3)	868272
563	17.9	1.5	1.5	chr12	62995083	62995218	(70280091)	+	Charlie7	DNA/hAT-Charlie	1777	1912	(700)	868811
1678	18.7	2.2	1.9	chr12	64668263	64668572	(68606737)	C	AluJb	SINE/Alu	(1)	311	1	871591
2488	5.9	0.0	0.0	chr12	64668681	64668968	(68606341)	C	AluYc	SINE/Alu	(11)	288	1	871592
220	35.1	1.5	3.0	chr12	65534624	65534758	(67740551)	+	MIR3	SINE/MIR	20	152	(56)	872930
716	28.7	19.7	6.3	chr12	66334800	66335825	(66939484)	C	L2a	LINE/L2	(614)	2805	1573	874229
662	26.6	7.3	0.9	chr12	68487944	68488174	(64787135)	+	MIRc	SINE/MIR	15	261	(7)	877469
2295	10.9	0.3	20.3	chr12	69168383	69168854	(64106455)	+	MER51B	LTR/ERV1	1	377	(0)	878828
891	19.5	4.0	5.7	chr12	69168869	69169096	(64106213)	C	MER21B	LTR/ERVL	(85)	853	630	878829
607	17.2	1.0	0.0	chr12	69169099	69169187	(64106122)	C	LTR26E	LTR/ERV1	(0)	604	515	878830
20	8.8	0.0	5.0	chr12	70367846	70367892	(62907417)	+	(AAGAAA)n	Simple_repeat	1	44	(0)	880785
24	8.1	0.0	2.4	chr12	70920836	70920876	(62354433)	+	(GGGGTG)n	Simple_repeat	1	41	(0)	881606
81	30.8	1.4	0.3	chr12	76030576	76030858	(57244451)	+	(TGCGGC)n	Simple_repeat	1	287	(0)	888508
13	13.8	4.3	6.2	chr12	76953104	76953149	(56322160)	+	(TTTCC)n	Simple_repeat	1	48	(0)	890150
16	17.2	7.4	1.7	chr12	77065820	77065843	(56209466)	+	(CGG)n	Simple_repeat	1	57	(0)	890306
16	11.3	0.0	0.0	chr12	77065844	77065872	(56209437)	+	(GGCGC)n	Simple_repeat	1	29	(0)	890307
14	9.6	0.0	0.0	chr12	77065873	77065895	(56209414)	+	(GGA)n	Simple_repeat	1	23	(0)	890308
379	33.3	2.8	4.9	chr12	78914850	78915032	(54360277)	C	L2c	LINE/L2	(110)	3277	3099	892812
257	31.1	8.7	1.8	chr12	78915218	78915246	(54360063)	+	MER5A	DNA/hAT-Charlie	5	187	(2)	892813
284	34.3	4.8	0.7	chr12	78915247	78915387	(54359922)	C	MER5B	DNA/hAT-Charlie	(29)	149	3	892814
541	30.8	6.1	0.0	chr12	79115994	79116194	(54159115)	+	MIRb	SINE/MIR	24	237	(31)	893079
16	3.7	7.1	0.0	chr12	81077597	81077624	(52197685)	+	(AATC)n	Simple_repeat	1	30	(0)	895936
2052	13.1	3.6	0.0	chr12	81083690	81083986	(52191323)	+	AluSc5	SINE/Alu	1	308	(1)	895944
488	30.8	3.0	0.0	chr12	81083989	81084147	(52191162)	+	MER102c	DNA/hAT-Charlie	130	293	(38)	895945
1867	12.3	9.4	0.3	chr12	83827691	83827999	(49447310)	C	MER61A	LTR/ERV1	(1)	340	1	899521
6099	12.5	4.9	1.3	chr12	83828000	83828990	(49446319)	C	MER61-int	LTR/ERV1	(0)	5217	4190	899521
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
18	15.1	0.0	2.6	chr12	89223400	89223438	(44051871)	+	(TTG)n	Simple_repeat	1	39	(0)	906659
579	17.1	0.0	0.0	chr12	89223445	89223532	(44051777)	C	AluJr	SINE/Alu	(33)	279	192	906660
284	35.4	11.0	3.0	chr12	90964455	90964858	(42310451)	C	L2c	LINE/L2	(36)	3390	2919	909292
3067	18.2	6.3	1.2	chr12	90964895	90965582	(42309727)	C	L1MB7	LINE/L1	(32)	6152	5427	909293
533	30.5	15.2	3.7	chr12	93020112	93020570	(40254739)	+	MamRTE1	LINE/RTE-BovB	3279	3799	(13)	912565
17	17.7	0.0	2.5	chr12	94148344	94148383	(39126926)	+	(GGC)n	Simple_repeat	1	40	(0)	914751
2959	10.1	2.3	1.2	chr12	94193923	94194345	(39080964)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	914837
12	16.8	10.6	0.0	chr12	94649867	94649913	(38625396)	+	(CCGCGCT)n	Simple_repeat	1	52	(0)	915565
3867	17.3	6.3	5.4	chr12	95522801	95523558	(37751751)	+	MER21B	LTR/ERVL	96	862	(6)	917386
302	29.0	1.0	2.0	chr12	95649541	95649642	(37625667)	+	MamTip2	DNA/hAT-Tip100	34	134	(171)	917663
743	24.6	2.8	2.8	chr12	96249079	96249215	(37026094)	C	MIR	SINE/MIR	(107)	155	18	918747
649	2.8	0.0	0.0	chr12	98503503	98503574	(34771735)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	922374
13	26.2	0.0	2.3	chr12	100142485	100142527	(33132782)	+	(CGC)n	Simple_repeat	1	43	(0)	924964
585	25.4	12.4	0.0	chr12	100987823	100988027	(32287282)	C	MLT1J2	LTR/ERVL-MaLR	(4)	444	211	926500
2344	30.8	8.0	6.5	chr12	101564926	101564961	(31710348)	+	L2	LINE/L2	2798	2829	(590)	927574
1831	14.6	4.4	3.9	chr12	101564962	101565324	(31709985)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	927577
19	28.1	0.0	2.8	chr12	104303658	104303729	(28971580)	+	(GGCCG)n	Simple_repeat	1	72	(0)	932309
625	27.0	6.2	0.7	chr12	104606396	104606597	(28668712)	C	MIRb	SINE/MIR	(8)	260	48	932922
2005	11.9	3.5	0.0	chr12	104606787	104607064	(28668245)	+	AluSx	SINE/Alu	1	288	(24)	932923
187	17.5	7.0	0.0	chr12	104746949	104746988	(28528321)	C	MIR3	SINE/MIR	(81)	127	85	933214
395	16.3	6.1	4.2	chr12	104747092	104747187	(28528122)	+	MER5B	DNA/hAT-Charlie	79	176	(2)	933215
11	34.9	1.4	1.4	chr12	105084548	105084617	(28190692)	+	(GCCCGCC)n	Simple_repeat	1	71	(0)	933802
382	28.0	11.4	2.6	chr12	106768874	106769064	(26506245)	C	MIRb	SINE/MIR	(8)	260	51	936803
232	24.2	2.9	2.9	chr12	106769160	106769227	(26506082)	C	MIR3	SINE/MIR	(197)	71	4	936804
13	23.2	0.0	0.0	chr12	106956029	106956064	(26319245)	+	(CCCGGC)n	Simple_repeat	1	36	(0)	937152
11	22.1	3.9	3.8	chr12	106956101	106956151	(26319158)	+	(CCCTGCC)n	Simple_repeat	1	53	(0)	937153
704	15.4	0.0	0.0	chr12	107225533	107225636	(26049673)	+	AluJr	SINE/Alu	134	237	(75)	937668
24	7.5	2.2	4.3	chr12	107225727	107225772	(26049537)	+	(GGA)n	Simple_repeat	1	47	(0)	937669
33	0.0	0.0	0.0	chr12	107321604	107321631	(25953678)	+	(CA)n	Simple_repeat	1	28	(0)	937870
482	29.3	9.4	3.2	chr12	108442422	108442760	(24832549)	+	L1ME3G	LINE/L1	152	513	(411)	940307
516	28.1	4.5	3.5	chr12	108516498	108516696	(24758613)	+	MIRb	SINE/MIR	54	254	(14)	940469
557	31.9	8.1	4.8	chr12	108604218	108604612	(24670697)	C	L2a	LINE/L2	(5)	3421	3013	940648
545	26.1	11.2	1.0	chr12	108609960	108610160	(24665149)	C	MIRb	SINE/MIR	(6)	262	39	940661
582	29.4	9.1	1.2	chr12	108610267	108610648	(24664661)	C	L2a	LINE/L2	(1)	3374	2957	940662
273	29.9	4.9	0.0	chr12	108612783	108612899	(24662410)	+	Charlie23a	DNA/hAT-Charlie	206	328	(11)	940669
1619	14.6	1.5	2.3	chr12	108613078	108613338	(24661971)	C	AluJr	SINE/Alu	(42)	270	12	940670
2553	7.5	0.3	0.0	chr12	108660170	108660476	(24614833)	+	AluSp	SINE/Alu	1	308	(5)	940755
15	29.1	5.9	3.2	chr12	108730695	108730813	(24544496)	+	(CCCCAG)n	Simple_repeat	1	126	(0)	940858
313	27.5	12.1	2.8	chr12	109436068	109436209	(23839100)	+	MIRb	SINE/MIR	50	206	(62)	942535
350	33.3	8.4	3.3	chr12	109734227	109734396	(23540913)	C	L2c	LINE/L2	(555)	2864	2690	943189
25	23.1	1.9	6.4	chr12	109833400	109833516	(23441793)	+	(CCGCCCG)n	Simple_repeat	1	111	(0)	943423
188	10.7	0.0	0.0	chr12	109833603	109833630	(23441679)	+	MIR	SINE/MIR	117	144	(118)	943424
1533	19.7	11.8	2.5	chr12	109881110	109881661	(23393648)	+	MER51B	LTR/ERV1	1	634	(0)	943557
320	27.1	15.3	0.8	chr12	110165752	110165885	(23109424)	+	MIRc	SINE/MIR	85	241	(27)	944177
825	25.3	11.6	0.0	chr12	110165960	110166188	(23109121)	+	MIR	SINE/MIR	2	260	(2)	944178
15	27.8	2.5	4.8	chr12	110429782	110429862	(22845447)	+	(GTG)n	Simple_repeat	1	83	(0)	944713
435	27.5	6.6	3.4	chr12	110688572	110688794	(22586515)	+	MIRc	SINE/MIR	1	236	(32)	945289
300	29.6	0.0	0.0	chr12	111322908	111322988	(21952321)	C	MER117	DNA/hAT-Charlie	(61)	136	56	946809
581	19.1	0.0	0.9	chr12	111369420	111369524	(21905785)	+	AluJo	SINE/Alu	44	147	(165)	946922
538	24.6	4.3	1.5	chr12	111369685	111369820	(21905489)	+	MIRb	SINE/MIR	21	160	(108)	946923
225	26.6	0.0	3.5	chr12	111370009	111370103	(21905206)	C	L2a	LINE/L2	(5)	3421	3321	946924
1563	19.0	6.5	1.0	chr12	112478145	112478290	(20797019)	C	L1MEc	LINE/L1	(4961)	1439	1293	949334
1855	10.4	8.1	0.0	chr12	112516781	112517031	(20758278)	+	AluSg	SINE/Alu	1	273	(37)	949409
48	0.0	0.0	0.0	chr12	112517038	112517078	(20758231)	+	(CA)n	Simple_repeat	1	41	(0)	949410
292	16.7	0.0	0.0	chr12	112517079	112517120	(20758189)	+	Alu	SINE/Alu	239	280	(21)	949411
56	0.0	0.0	0.0	chr12	112517121	112517168	(20758141)	+	(CA)n	Simple_repeat	1	48	(0)	949412
441	26.2	10.0	5.7	chr12	112517211	112517472	(20757837)	C	LTR33A_	LTR/ERVL	(258)	273	10	949407
710	22.0	1.3	2.6	chr12	112517475	112517628	(20757681)	+	MER5A1	DNA/hAT-Charlie	8	159	(7)	949413
18	12.1	2.6	2.6	chr12	113077644	113077681	(20197628)	+	(CCG)n	Simple_repeat	1	39	(0)	950738
228	23.3	1.4	6.4	chr12	113152924	113153001	(20122308)	C	Charlie8	DNA/hAT-Charlie	(3)	2425	2352	950919
275	26.2	1.4	19.0	chr12	113153532	113153605	(20121704)	C	MIRb	SINE/MIR	(6)	262	207	950920
490	28.7	0.1	3.8	chr12	113374589	113374752	(19900557)	+	MIR3	SINE/MIR	5	162	(100)	951433
14	25.9	2.2	0.0	chr12	113375006	113375051	(19900258)	+	G-rich	Low_complexity	1	47	(0)	951434
321	27.4	0.0	0.0	chr12	113422146	113422229	(19853080)	+	MIRc	SINE/MIR	65	148	(120)	951560
1929	17.4	0.3	0.0	chr12	113618211	113618509	(19656800)	+	AluJb	SINE/Alu	1	300	(12)	952036
326	25.9	2.3	0.0	chr12	113781440	113781524	(19493785)	+	MER117	DNA/hAT-Charlie	106	192	(5)	952487
348	29.2	4.2	5.5	chr12	113849812	113850044	(19425265)	+	LTR33	LTR/ERVL	35	265	(266)	952632
1995	21.3	9.3	1.3	chr12	114193718	114194174	(19081135)	+	MLT1D	LTR/ERVL-MaLR	9	505	(0)	953173
216	33.3	5.1	2.6	chr12	114735542	114735655	(18539654)	+	MIRc	SINE/MIR	22	138	(130)	954385
518	31.7	4.2	2.8	chr12	115469196	115469409	(17805900)	+	MER103C	DNA/hAT-Charlie	62	278	(19)	956081
233	35.1	3.4	4.2	chr12	116426642	116426760	(16848549)	+	MIRb	SINE/MIR	24	141	(127)	958019
1813	12.4	6.1	1.1	chr12	116426804	116427085	(16848224)	+	AluJr	SINE/Alu	1	297	(15)	958020
2322	25.9	6.5	2.0	chr12	116973886	116974633	(16300676)	+	L1MEc	LINE/L1	42	825	(5575)	959357
1296	27.5	12.8	2.3	chr12	117003468	117004242	(16271067)	C	L1MEd	LINE/L1	(5322)	1764	897	959399
343	28.2	7.8	9.2	chr12	117076744	117076857	(16198452)	C	MIRb	SINE/MIR	(112)	156	35	959515
263	25.4	4.0	1.4	chr12	117875447	117875577	(15399732)	C	MIRc	SINE/MIR	(76)	186	51	961274
348	26.8	20.7	5.7	chr12	117875661	117875977	(15399332)	+	L2a	LINE/L2	3039	3415	(11)	961275
2446	20.7	3.6	1.3	chr12	118553867	118554275	(14721034)	+	MER70A	LTR/ERVL	63	472	(0)	962822
227	28.4	1.3	3.9	chr12	118554285	118554361	(14720948)	C	MIRb	SINE/MIR	(179)	89	8	962821
2213	11.2	0.3	0.0	chr12	118554454	118554748	(14720561)	C	AluSx	SINE/Alu	(16)	296	1	962824
18	22.1	1.6	4.7	chr12	118981397	118981459	(14293850)	+	GA-rich	Low_complexity	1	64	(0)	963748
12	19.0	0.0	8.2	chr12	119154658	119154706	(14120603)	+	(TGGAGC)n	Simple_repeat	1	49	(0)	964105
404	25.9	13.4	4.2	chr12	119154926	119155114	(14120195)	+	MIRc	SINE/MIR	9	231	(37)	964106
35	5.0	0.0	0.0	chr12	119156612	119156652	(14118657)	+	(CCGGAG)n	Simple_repeat	1	41	(0)	964111
48	5.5	0.0	0.0	chr12	119156703	119156759	(14118550)	+	(AGCCGG)n	Simple_repeat	1	57	(0)	964112
474	25.6	11.3	1.1	chr12	119940787	119940960	(13334349)	+	Chap1_Mam	DNA/hAT-Charlie	43	236	(106)	965870
2273	9.5	0.0	0.3	chr12	119941217	119941512	(13333797)	+	AluSq	SINE/Alu	1	295	(18)	965871
33	3.1	0.0	0.0	chr12	120089272	120089304	(13186005)	+	(GT)n	Simple_repeat	1	33	(0)	966211
15	4.8	4.5	0.0	chr12	120089333	120089354	(13185955)	+	(GT)n	Simple_repeat	1	23	(0)	966211
31	0.0	3.3	0.0	chr12	120089376	120089405	(13185904)	+	(GT)n	Simple_repeat	1	31	(0)	966211
2165	8.7	1.4	0.0	chr12	120089406	120089681	(13185628)	C	AluSp	SINE/Alu	(33)	280	1	966212
1298	12.6	4.3	0.8	chr12	120744713	120744961	(12530348)	+	L1MA4	LINE/L1	6043	6300	(0)	967784
835	27.6	8.7	0.8	chr12	120744973	120745363	(12529946)	+	ERV3-16A3_I-int	LTR/ERVL	388	812	(4414)	967785
647	25.1	13.6	4.3	chr12	120823352	120823697	(12451612)	+	L2	LINE/L2	1958	2340	(1079)	967918
513	18.9	5.9	1.2	chr12	120994509	120995889	(12279420)	+	(TCCAC)n	Simple_repeat	1	1462	(0)	968329
325	25.2	10.9	2.1	chr12	121297449	121297590	(11977719)	C	MamTip1	DNA/hAT-Tip100	(111)	156	1	969063
13	13.1	8.9	4.9	chr12	121494249	121494304	(11781005)	+	GA-rich	Low_complexity	1	61	(0)	969520
221	31.1	9.7	2.8	chr12	121530880	121531050	(11744259)	C	MIR3	SINE/MIR	(6)	202	29	969607
231	25.0	5.4	4.1	chr12	121538356	121538486	(11736823)	+	MIR3	SINE/MIR	10	138	(130)	969617
246	36.2	0.9	0.0	chr12	121538624	121538728	(11736581)	C	MIR	SINE/MIR	(40)	222	117	969618
1253	25.1	4.2	3.6	chr12	121770110	121770465	(11504844)	C	MLT1B	LTR/ERVL-MaLR	(29)	361	4	970298
465	24.3	15.4	1.1	chr12	121859265	121859447	(11415862)	+	MIRb	SINE/MIR	36	249	(19)	970490
427	28.0	9.3	0.0	chr12	121859553	121859725	(11415584)	C	MIRb	SINE/MIR	(25)	205	14	970491
1996	12.8	0.3	0.0	chr12	121859877	121860172	(11415137)	+	AluSz	SINE/Alu	1	297	(15)	970492
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
2578	9.2	0.0	0.0	chr12	122501959	122502261	(10773048)	+	AluSg	SINE/Alu	1	303	(7)	972007
812	19.4	0.0	0.8	chr12	122502527	122502660	(10772649)	C	FLAM_C	SINE/Alu	(10)	133	1	972008
2261	10.4	0.0	0.3	chr12	122659963	122660260	(10615049)	+	AluSx1	SINE/Alu	1	297	(15)	972367
1110	22.7	15.4	6.0	chr12	122660261	122660446	(10614863)	C	MLT1D	LTR/ERVL-MaLR	(75)	430	190	972366
2282	11.7	0.0	0.0	chr12	122660447	122660746	(10614563)	C	AluSx1	SINE/Alu	(10)	302	3	972368
11	19.6	2.8	9.6	chr12	122774536	122774606	(10500703)	+	G-rich	Low_complexity	1	73	(0)	972649
2729	2.3	0.0	1.6	chr12	122774808	122775116	(10500193)	+	AluY	SINE/Alu	1	304	(7)	972650
1940	8.7	9.0	0.8	chr12	122919882	122920180	(10355129)	C	AluSz	SINE/Alu	(0)	312	1	972946
475	29.4	8.8	7.0	chr12	122920434	122920622	(10354687)	+	MIR	SINE/MIR	2	202	(60)	972947
19	13.3	2.3	2.3	chr12	122966098	122966140	(10309169)	+	(GCTGCGG)n	Simple_repeat	1	44	(0)	973066
2362	6.7	0.3	3.2	chr12	123383300	123383612	(9891697)	C	AluSp	SINE/Alu	(9)	304	1	973946
1742	17.9	1.4	1.0	chr12	123401885	123402181	(9873128)	C	AluJr	SINE/Alu	(14)	298	1	973983
245	31.3	6.9	4.1	chr12	123402184	123402353	(9872956)	C	L2a	LINE/L2	(602)	2817	2643	973972
196	33.8	2.9	0.0	chr12	123402369	123402436	(9872873)	+	L2b	LINE/L2	3292	3361	(14)	973984
17	7.0	0.0	5.9	chr12	124318649	124318682	(8956627)	+	(AAAC)n	Simple_repeat	1	34	(0)	975880
236	31.8	2.2	0.0	chr12	124318717	124318804	(8956505)	C	MIR1_Amn	SINE/MIR	(67)	163	74	975881
859	28.4	9.9	0.7	chr12	124371321	124371732	(8903577)	+	MLT1C	LTR/ERVL-MaLR	7	460	(7)	975958
214	28.9	6.7	0.0	chr12	124371740	124371836	(8903473)	+	L2a	LINE/L2	3061	3164	(262)	975957
357	15.2	10.0	3.9	chr12	124510952	124511070	(8764239)	+	L2b	LINE/L2	3293	3425	(1)	976177
309	22.5	1.4	0.0	chr12	124511364	124511434	(8763875)	+	MIR3	SINE/MIR	69	140	(68)	976180
354	30.4	1.0	1.0	chr12	124652296	124652398	(8622911)	+	MER81	DNA/hAT-Blackjack	3	105	(9)	976495
390	24.8	4.1	3.3	chr12	124652537	124652657	(8622652)	+	MIRb	SINE/MIR	88	209	(59)	976496
355	29.7	17.1	4.8	chr12	124654797	124655111	(8620198)	+	L2a	LINE/L2	2965	3326	(100)	976503
306	25.8	8.2	3.9	chr12	124771790	124771918	(8503391)	C	Charlie4z	DNA/hAT-Charlie	(21)	146	12	976799
679	1.4	0.0	0.0	chr12	124927842	124927915	(8347394)	C	tRNA-Phe-TTY	tRNA	(2)	74	1	977166
568	27.6	4.1	2.0	chr12	124928036	124928262	(8347047)	+	L2a	LINE/L2	3126	3424	(2)	977167
331	29.4	17.5	6.5	chr12	124940369	124940722	(8334587)	C	L2a	LINE/L2	(18)	3357	2960	977203
388	31.2	6.9	1.4	chr12	124940734	124940951	(8334358)	C	L2a	LINE/L2	(560)	2859	2629	977203
300	34.8	5.4	7.1	chr12	124940953	124941164	(8334145)	C	L1MC5	LINE/L1	(2137)	7167	6963	977204
301	30.2	11.6	7.5	chr12	125533866	125534226	(7741083)	C	HAL1b	LINE/L1	(18)	2403	2026	978367
1071	24.0	14.7	3.3	chr12	129152739	129153187	(4122122)	+	LTR33A	LTR/ERVL	3	511	(9)	984571
21	6.5	0.0	0.0	chr12	131163415	131163446	(2111863)	+	(ACCGGG)n	Simple_repeat	1	32	(0)	987803
2459	12.4	2.5	0.0	chr12	131602827	131603181	(1672128)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	988329
1536	25.4	7.0	8.4	chr12	131603434	131604086	(1671223)	C	MLT1E1A	LTR/ERVL-MaLR	(16)	664	22	988330
13	17.7	10.2	1.5	chr12	131894611	131894669	(1380640)	+	(GCCGCGGC)n	Simple_repeat	1	65	(0)	988783
24	12.7	0.0	0.0	chr12	131894687	131894748	(1380561)	+	(AGTCGG)n	Simple_repeat	1	62	(0)	988784
12	21.6	5.1	0.0	chr12	131896745	131896783	(1378526)	+	(TTCC)n	Simple_repeat	1	41	(0)	988786
13	28.9	0.0	5.7	chr12	131949668	131949737	(1325572)	+	(GCCCC)n	Simple_repeat	1	70	(0)	988881
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
12	20.1	4.1	3.9	chr12	132144699	132144747	(1130562)	+	G-rich	Low_complexity	1	51	(0)	989134
22	16.3	0.0	0.0	chr12	132618225	132618260	(657049)	+	A-rich	Low_complexity	1	36	(0)	989681
2243	11.3	0.0	0.0	chr12	132709677	132709977	(565332)	C	AluSx	SINE/Alu	(9)	303	3	989822
368	21.4	15.4	0.0	chr12	132710043	132710168	(565141)	+	L1M2	LINE/L1	5618	5766	(525)	989823
911	17.5	0.0	6.2	chr12	132956529	132956705	(318604)	C	AluJo	SINE/Alu	(10)	302	137	990230
19	11.0	2.4	2.4	chr13	19863432	19863472	(94500856)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	993246
16	11.7	0.0	0.0	chr13	19958702	19958735	(94405593)	+	(CCT)n	Simple_repeat	1	34	(0)	993492
20	16.3	0.0	0.0	chr13	19958915	19958955	(94405373)	+	(CGGAGG)n	Simple_repeat	1	41	(0)	993493
13	14.7	3.3	0.0	chr13	19959005	19959034	(94405294)	+	(CCG)n	Simple_repeat	1	31	(0)	993494
185	25.0	1.5	1.5	chr13	20345369	20345433	(94018895)	+	MIR3	SINE/MIR	106	170	(38)	994121
12	14.9	8.1	0.0	chr13	21061305	21061341	(93302987)	+	(CTCCCAG)n	Simple_repeat	1	40	(0)	995404
348	25.0	10.6	5.9	chr13	21124112	21124264	(93240064)	C	LTR67B	LTR/ERVL	(268)	235	75	995559
541	27.1	11.1	6.7	chr13	22956189	22956524	(91407804)	+	L1MD	LINE/L1	3674	4029	(2117)	998134
1724	24.8	9.1	1.3	chr13	22956525	22957080	(91407248)	+	LTR75B	LTR/ERVL	5	608	(0)	998135
4951	14.8	2.6	6.7	chr13	23507873	23508191	(90856137)	+	Tigger3b	DNA/TcMar-Tigger	216	538	(693)	998954
2273	7.0	1.4	0.3	chr13	23508192	23508476	(90855852)	C	AluY	SINE/Alu	(6)	305	18	998958
2304	11.7	0.0	0.0	chr13	24044198	24044530	(90319798)	C	AluSc	SINE/Alu	(0)	309	1	999705
449	26.2	10.8	4.1	chr13	24381270	24381587	(89982741)	+	L1MD	LINE/L1	3674	4015	(2131)	1000188
1322	27.0	7.9	2.7	chr13	24381601	24382164	(89982164)	+	LTR75B	LTR/ERVL	1	608	(0)	1000189
13	5.2	0.0	0.0	chr13	25046989	25047008	(89317320)	+	(AAT)n	Simple_repeat	1	20	(0)	1001211
18	10.5	0.0	0.0	chr13	25047466	25047496	(89316832)	+	(GGGA)n	Simple_repeat	1	31	(0)	1001212
788	18.5	0.0	2.2	chr13	25711428	25711562	(88652766)	+	FLAM_C	SINE/Alu	1	132	(11)	1002196
354	32.2	6.8	1.9	chr13	26663833	26663987	(87700341)	+	MIRc	SINE/MIR	18	180	(88)	1003606
4218	10.6	11.8	3.5	chr13	26785434	26786198	(87578130)	C	LTR1A2	LTR/ERV1	(0)	837	1	1003795
364	29.2	18.6	4.2	chr13	26972053	26972335	(87391993)	C	L2c	LINE/L2	(0)	3387	3055	1004085
1087	22.4	7.0	14.2	chr13	27042831	27043146	(87321182)	C	Tigger13a	DNA/TcMar-Tigger	(268)	503	187	1004217
16	18.9	0.0	0.0	chr13	27380942	27380971	(86983357)	+	G-rich	Low_complexity	1	30	(0)	1004855
19	0.0	0.0	0.0	chr13	27620497	27620520	(86743808)	+	(CGC)n	Simple_repeat	1	24	(0)	1005251
14	26.4	3.7	0.0	chr13	27621849	27621902	(86742426)	+	(TCCT)n	Simple_repeat	1	56	(0)	1005252
36	4.5	2.2	0.0	chr13	27920071	27920116	(86444212)	+	(CCCGGCT)n	Simple_repeat	1	47	(0)	1005748
17	4.1	0.0	3.7	chr13	27920254	27920280	(86444048)	+	(GCC)n	Simple_repeat	1	27	(0)	1005749
579	27.0	6.0	5.6	chr13	29836441	29836707	(84527621)	+	L1MEg	LINE/L1	190	457	(5785)	1008693
2556	27.0	12.6	9.2	chr13	29836715	29837663	(84526665)	+	L1MEg	LINE/L1	269	1254	(4988)	1008693
632	12.6	11.2	0.0	chr13	30037204	30037330	(84326998)	+	MER53	DNA/hAT	29	171	(22)	1009013
12	24.3	0.0	0.0	chr13	30037339	30037372	(84326956)	+	(GTT)n	Simple_repeat	1	34	(0)	1009014
284	28.0	5.7	1.0	chr13	30119436	30119536	(84244792)	+	CR1-3_Croc	LINE/CR1	2891	2996	(609)	1009149
187	34.5	2.2	5.4	chr13	30119538	30119629	(84244699)	+	L3	LINE/CR1	4008	4096	(3)	1009145
1966	13.3	7.3	0.8	chr13	30285270	30285625	(84078703)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1009399
9662	12.5	3.9	0.9	chr13	30285632	30287205	(84077123)	+	THE1D-int	LTR/ERVL-MaLR	7	1629	(2)	1009399
471	27.2	9.6	0.0	chr13	30420897	30421076	(83943252)	+	MIRb	SINE/MIR	29	227	(41)	1009664
276	29.1	2.8	4.8	chr13	30446230	30446427	(83917901)	+	L2b	LINE/L2	3200	3389	(37)	1009708
12	15.5	3.5	0.0	chr13	30464885	30464913	(83899415)	+	G-rich	Low_complexity	1	30	(0)	1009739
15	11.7	0.0	0.0	chr13	30464913	30464940	(83899388)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1009740
15	28.6	1.5	2.9	chr13	30464956	30465022	(83899306)	+	(CCGC)n	Simple_repeat	1	68	(0)	1009741
12	9.2	0.0	4.0	chr13	30465086	30465110	(83899218)	+	(CGCC)n	Simple_repeat	1	25	(0)	1009742
72	20.3	5.0	5.1	chr13	30465170	30465450	(83898878)	+	(CGC)n	Simple_repeat	1	295	(0)	1009743
5661	27.0	12.9	7.3	chr13	32383373	32384452	(81979876)	C	L2a	LINE/L2	(1959)	1460	259	1012679
239	9.1	0.0	0.0	chr13	32384472	32384515	(81979813)	C	L1MA3	LINE/L1	(1)	6304	6261	1012682
187	22.1	9.3	5.6	chr13	32495551	32495622	(81868706)	C	MIR3	SINE/MIR	(133)	75	1	1012876
11	15.8	6.5	4.1	chr13	36855935	36855980	(77508348)	+	(CTCTCC)n	Simple_repeat	1	49	(0)	1019167
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
2349	12.1	0.0	0.0	chr13	37844282	37844594	(76519734)	C	AluSp	SINE/Alu	(0)	313	1	1020521
4024	26.5	4.9	4.0	chr13	37844595	37847550	(76516778)	+	L1M3b	LINE/L1	1761	4415	(3147)	1020520
1979	22.0	3.6	2.0	chr13	38259739	38260235	(76104093)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1021025
5621	15.4	6.2	1.4	chr13	38441850	38443833	(75920495)	C	L1MC1	LINE/L1	(0)	6333	4241	1021248
2115	17.5	3.3	3.1	chr13	39052864	39053411	(75310917)	+	MLT2A2	LTR/ERVL	1	554	(0)	1022097
12	12.4	5.1	4.9	chr13	40666130	40666168	(73698160)	+	(GGCAGC)n	Simple_repeat	1	41	(0)	1024470
7291	13.0	8.9	1.7	chr13	41107185	41108239	(73256089)	+	MER52C	LTR/ERV1	1	1152	(126)	1025263
380	26.7	14.5	0.0	chr13	41496958	41497122	(72867206)	C	MIRb	SINE/MIR	(71)	197	5	1025923
17	23.2	3.8	4.9	chr13	42040494	42040572	(72323756)	+	G-rich	Low_complexity	1	82	(0)	1026755
375	33.3	4.9	8.6	chr13	42351171	42351577	(72012751)	+	MLT1K	LTR/ERVL-MaLR	103	493	(102)	1027229
506	29.5	2.9	4.0	chr13	42351594	42351840	(72012488)	+	MLT1K	LTR/ERVL-MaLR	324	567	(28)	1027230
241	37.6	4.9	3.2	chr13	44141240	44141519	(70222809)	C	L2	LINE/L2	(439)	2980	2696	1029839
309	33.1	8.7	2.2	chr13	44157822	44158003	(70206325)	+	MIRc	SINE/MIR	4	198	(70)	1029865
16	21.6	0.0	0.0	chr13	44436971	44437002	(69927326)	+	(C)n	Simple_repeat	1	32	(0)	1030298
1240	26.2	11.3	4.3	chr13	44800540	44801148	(69563180)	+	MLT2F	LTR/ERVL	1	657	(6)	1030987
1764	14.4	6.4	2.0	chr13	44894803	44895100	(69469228)	C	AluJr	SINE/Alu	(0)	312	1	1031160
198	35.2	6.2	0.0	chr13	49279125	49279229	(65085099)	C	L2c	LINE/L2	(2)	3385	3274	1038109
368	31.9	7.5	0.5	chr13	49279332	49279517	(65084811)	C	L2c	LINE/L2	(231)	3156	2957	1038109
17	6.9	3.0	2.9	chr13	49347856	49347888	(65016440)	+	(CCTT)n	Simple_repeat	1	34	(0)	1038231
708	24.4	5.2	8.1	chr13	49348573	49348829	(65015499)	C	MamTip3	DNA/hAT-Tip100	(235)	265	9	1038232
1603	30.4	5.6	4.6	chr13	49351339	49352117	(65012211)	C	L2a	LINE/L2	(340)	3079	2293	1038239
858	31.1	16.5	4.3	chr13	49693640	49694701	(64669627)	+	L2	LINE/L2	1863	3079	(340)	1038863
446	25.0	5.0	0.8	chr13	49836616	49836748	(64527580)	+	LTR33A_	LTR/ERVL	1	139	(392)	1039146
13	19.7	0.0	6.5	chr13	49936438	49936483	(64427845)	+	G-rich	Low_complexity	1	46	(0)	1039354
803	30.6	5.3	17.1	chr13	50252290	50253050	(64111278)	C	L2c	LINE/L2	(848)	2571	1906	1039847
1308	33.2	4.0	2.8	chr13	50536708	50537321	(63827007)	C	L1M2c	LINE/L1	(6159)	630	9	1040263
30	11.8	8.0	1.2	chr13	51222279	51222353	(63141975)	+	(GGCGCG)n	Simple_repeat	1	81	(0)	1041254
251	28.6	14.7	1.2	chr13	52129297	52129466	(62234862)	C	MIRb	SINE/MIR	(33)	235	39	1042631
312	22.6	12.3	2.1	chr13	52362346	52362440	(62001888)	C	MER102c	DNA/hAT-Charlie	(25)	306	201	1042983
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
13	13.0	0.0	7.7	chr13	52848413	52848451	(61515877)	+	(GCCTCAA)n	Simple_repeat	1	39	(0)	1043781
12	18.8	2.6	2.6	chr13	52850260	52850297	(61514031)	+	(GGAGCAG)n	Simple_repeat	1	39	(0)	1043782
1441	9.3	0.4	13.6	chr13	52968370	52968563	(61395765)	+	L1PB2	LINE/L1	5913	6087	(64)	1043977
33	8.7	0.0	0.0	chr13	53028959	53029007	(61335321)	+	(CTCCAG)n	Simple_repeat	1	49	(0)	1044072
41	2.4	0.0	0.0	chr13	53201091	53201132	(61163196)	+	(CGC)n	Simple_repeat	1	42	(0)	1044310
43431	12.5	3.3	1.6	chr13	54695278	54698755	(59665573)	C	MER52-int	LTR/ERV1	(2749)	4342	776	1046245
5785	6.8	1.5	3.6	chr13	55053631	55054427	(59309901)	+	LTR17	LTR/ERV1	1	780	(0)	1046680
236	25.3	3.9	8.8	chr13	59409268	59409404	(54954924)	C	MIR	SINE/MIR	(107)	155	38	1052057
349	34.1	15.8	1.2	chr13	59544074	59544417	(54819911)	C	L2a	LINE/L2	(106)	3320	2917	1052254
444	23.6	23.3	3.1	chr13	59544465	59544758	(54819570)	+	HAL1	LINE/L1	21	376	(2131)	1052255
14	15.3	2.6	2.6	chr13	59769268	59769305	(54595023)	+	A-rich	Low_complexity	1	39	(0)	1052557
21	11.2	0.0	0.0	chr13	60397256	60397285	(53967043)	+	(T)n	Simple_repeat	1	30	(0)	1053462
4299	9.3	1.1	1.9	chr13	60584070	60584715	(53779613)	+	LTR8	LTR/ERV1	23	663	(28)	1053721
1054	13.2	3.1	1.0	chr13	60584738	60584929	(53779399)	+	MER67C	LTR/ERV1	516	711	(0)	1053722
4900	25.3	5.9	10.6	chr13	65352615	65354485	(49009843)	+	L1M3e	LINE/L1	596	2384	(5105)	1059698
392	31.8	1.7	2.3	chr13	70530135	70530192	(43834136)	C	MLT1J-int	LTR/ERVL-MaLR	(1078)	309	252	1066261
1642	18.2	5.6	3.2	chr13	70530193	70530572	(43833756)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1066262
15	10.6	6.8	4.3	chr13	73075957	73076000	(41288328)	+	A-rich	Low_complexity	1	47	(0)	1069866
1465	16.3	11.5	3.5	chr13	73903700	73904010	(40460318)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1071240
227	17.9	0.0	0.0	chr13	74168159	74168197	(40196131)	+	Tigger10	DNA/TcMar-Tigger	259	297	(1547)	1071607
725	32.4	9.7	1.5	chr13	74168528	74169047	(40195281)	+	Tigger10	DNA/TcMar-Tigger	381	947	(897)	1071608
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
2509	19.3	0.7	0.4	chr13	76488148	76488605	(37875723)	C	Tigger5b	DNA/TcMar-Tigger	(13)	459	1	1074804
359	30.9	6.5	8.6	chr13	76704580	76705000	(37659328)	+	HAL1	LINE/L1	57	468	(2039)	1075106
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
16	4.3	0.0	3.9	chr13	77329420	77329445	(37034883)	+	(CTC)n	Simple_repeat	1	26	(0)	1076038
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
51	20.2	0.9	0.9	chr13	80684674	80684785	(33679543)	+	(TCCC)n	Simple_repeat	1	113	(0)	1080617
8192	19.9	4.1	0.4	chr13	85162667	85164236	(29200092)	C	MSTB-int	LTR/ERVL-MaLR	(16)	1635	5	1086186
2039	17.2	9.9	0.0	chr13	85164241	85164624	(29199704)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1086186
45	2.4	0.0	0.0	chr13	87673999	87674041	(26690287)	+	(CA)n	Simple_repeat	1	43	(0)	1089328
13	13.1	0.0	0.0	chr13	87677539	87677563	(26686765)	+	(CGG)n	Simple_repeat	1	25	(0)	1089329
37	23.5	0.0	1.1	chr13	87677746	87677837	(26686491)	+	(CAG)n	Simple_repeat	1	92	(0)	1089330
2027	22.8	8.1	1.7	chr13	91544708	91545239	(22819089)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	1094399
851	28.0	17.0	3.0	chr13	94594896	94595618	(19768710)	C	L2a	LINE/L2	(0)	3426	2569	1098573
12	19.3	4.7	2.2	chr13	94947909	94947951	(19416377)	+	(TTCTGT)n	Simple_repeat	1	45	(0)	1099154
440	30.9	12.6	4.7	chr13	94996359	94996613	(19367715)	C	LTR33A_	LTR/ERVL	(129)	402	125	1099229
1904	10.7	9.7	2.2	chr13	95783739	95784053	(18580275)	C	MER61A	LTR/ERV1	(0)	341	1	1100686
1248	28.3	10.6	1.3	chr13	95987820	95988270	(18376058)	+	LTR33	LTR/ERVL	5	502	(13)	1100949
365	21.9	5.3	8.6	chr13	96053795	96053929	(18310399)	+	MER5B	DNA/hAT-Charlie	6	135	(43)	1101024
2148	22.7	3.5	1.2	chr13	96104445	96104953	(18259375)	+	MER74A	LTR/ERVL	25	545	(13)	1101109
428	24.2	4.7	2.3	chr13	98183475	98183602	(16180726)	+	MER45A	DNA/hAT-Tip100	1	147	(31)	1104257
228	34.4	0.8	0.0	chr13	98653540	98653625	(15710703)	+	MIRc	SINE/MIR	27	115	(153)	1105008
240	25.0	6.2	1.3	chr13	98653652	98653728	(15710600)	C	MER5B	DNA/hAT-Charlie	(97)	81	1	1105009
354	26.9	0.0	1.1	chr13	99432443	99432536	(14931792)	+	Charlie4a	DNA/hAT-Charlie	170	262	(246)	1106231
339	28.2	16.5	1.4	chr13	99432648	99432863	(14931465)	C	L2b	LINE/L2	(2)	3373	3119	1106232
878	21.9	0.5	3.5	chr13	99796439	99796637	(14567691)	C	MIR	SINE/MIR	(10)	252	60	1106852
1939	12.6	2.7	0.0	chr13	99954653	99954937	(14409391)	C	AluSz	SINE/Alu	(19)	293	1	1107111
25	22.4	1.3	3.8	chr13	99981084	99981162	(14383166)	+	(CCTCCC)n	Simple_repeat	1	80	(0)	1107133
11	17.0	2.9	2.8	chr13	99981243	99981277	(14383051)	+	(CGAGGC)n	Simple_repeat	1	36	(0)	1107134
3372	25.3	5.0	10.7	chr13	102191631	102193086	(12171242)	C	MLT1A-int	LTR/ERVL-MaLR	(1)	1370	2	1110436
2415	27.3	8.4	2.9	chr13	102718078	102718177	(11646151)	+	L1MEj	LINE/L1	1622	1726	(434)	1111178
35	0.0	0.0	0.0	chr13	102718522	102718551	(11645777)	+	(TG)n	Simple_repeat	1	30	(0)	1111180
286	33.9	2.5	0.0	chr13	104550475	104550592	(9813736)	C	L2	LINE/L2	(620)	2799	2679	1113593
1873	18.1	3.5	3.4	chr13	105957937	105958484	(8405844)	C	MLT2A2	LTR/ERVL	(0)	554	1	1115423
4991	19.6	7.2	0.6	chr13	108002612	108004340	(6359988)	C	L1M1	LINE/L1	(5710)	1855	12	1118174
682	4.7	0.0	0.0	chr13	109131527	109131612	(5232716)	C	L1PA5	LINE/L1	(3)	6151	6066	1119668
312	12.7	11.3	3.1	chr13	109131643	109131707	(5232621)	C	MADE1	DNA/TcMar-Mariner	(0)	80	10	1119669
212	36.1	10.1	5.2	chr13	110301895	110302568	(4061760)	C	L2	LINE/L2	(550)	2869	2159	1121122
15	22.1	3.6	3.5	chr13	110307028	110307083	(4057245)	+	(GGC)n	Simple_repeat	1	58	(0)	1121126
1540	18.3	9.3	0.3	chr13	110600335	110600674	(3763654)	C	MLT2D	LTR/ERVL	(40)	374	1	1121481
27	0.0	2.9	2.9	chr13	110600877	110600910	(3763418)	+	(TGTTGCTT)n	Simple_repeat	1	35	(0)	1121483
14	16.5	2.9	0.0	chr13	110712418	110712451	(3651877)	+	(GGCCGA)n	Simple_repeat	1	35	(0)	1121636
373	28.1	13.3	1.4	chr13	111287452	111287740	(3076588)	C	L2a	LINE/L2	(54)	3372	2998	1122367
13	26.4	0.0	3.8	chr13	112453613	112453665	(1910663)	+	(AGCCAC)n	Simple_repeat	1	53	(0)	1123510
2609	22.9	6.6	8.2	chr13	113211685	113212501	(1151827)	C	L1ME1	LINE/L1	(452)	5727	4960	1124332
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
2358	4.0	0.7	0.0	chr13	113363228	113363503	(1000825)	C	AluSx3	SINE/Alu	(32)	279	2	1124587
12	24.0	1.6	6.5	chr13	113491013	113491073	(873255)	+	(GGCGG)n	Simple_repeat	1	62	(0)	1124764
12429	19.1	7.3	5.6	chr13	113660703	113664431	(699897)	+	L1MD1	LINE/L1	1311	6627	(6)	1124946
23	23.3	1.8	0.0	chr13	113860119	113860173	(504155)	+	GA-rich	Low_complexity	1	56	(0)	1125060
2277	3.6	3.1	6.2	chr14	20342727	20343030	(86700688)	C	AluY	SINE/Alu	(17)	294	1	1127886
22	3.8	0.0	0.0	chr14	20343033	20343065	(86700653)	+	(T)n	Simple_repeat	1	33	(0)	1127887
17	13.5	0.0	0.0	chr14	20435564	20435596	(86608122)	+	(TCTTCT)n	Simple_repeat	1	33	(0)	1128057
829	14.5	0.0	7.2	chr14	20436508	20436652	(86607066)	+	AluJb	SINE/Alu	2	136	(176)	1128058
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
638	2.7	0.0	0.0	chr14	20681690	20681762	(86361956)	+	tRNA-Thr-ACA	tRNA	1	73	(3)	1128457
5258	8.8	0.1	1.0	chr14	20821648	20822344	(86221374)	C	LTR8	LTR/ERV1	(0)	691	1	1128667
16	19.4	2.4	0.0	chr14	20971438	20971478	(86072240)	+	(CTCC)n	Simple_repeat	1	42	(0)	1128895
25	22.4	2.5	2.4	chr14	21092542	21092622	(85951096)	+	(GGCTGA)n	Simple_repeat	1	83	(0)	1129071
23	17.2	1.9	0.0	chr14	21092584	21092635	(85951083)	+	(GGCGGA)n	Simple_repeat	1	53	(0)	1129072
12	16.6	4.5	4.3	chr14	21094270	21094313	(85949405)	+	G-rich	Low_complexity	1	46	(0)	1129073
1717	8.6	0.0	0.9	chr14	21301461	21301677	(85742041)	+	AluSc	SINE/Alu	66	281	(28)	1129475
260	19.7	2.7	7.8	chr14	21529042	21529118	(85514600)	C	LFSINE_Vert	SINE/tRNA	(0)	459	387	1129931
236	26.9	2.9	2.9	chr14	21529468	21529536	(85514182)	C	MER5B	DNA/hAT-Charlie	(0)	178	110	1129932
922	14.5	3.2	4.3	chr14	22471372	22471558	(84572160)	+	MER53	DNA/hAT	9	193	(0)	1131217
34	31.1	3.5	1.7	chr14	23059221	23059391	(83984327)	+	(CGCTCC)n	Simple_repeat	1	177	(0)	1132233
495	23.8	4.6	1.0	chr14	23116343	23116545	(83927173)	C	MIR	SINE/MIR	(0)	230	19	1132318
13	15.8	4.2	6.0	chr14	23155361	23155408	(83888310)	+	(CCTT)n	Simple_repeat	1	50	(0)	1132376
315	30.6	6.9	0.0	chr14	23580330	23580437	(83463281)	C	L2b	LINE/L2	(0)	3375	3260	1133053
7335	9.2	12.2	16.2	chr14	23580444	23582015	(83461703)	+	LTR12C	LTR/ERV1	3	1518	(61)	1133054
13	22.4	0.0	5.8	chr14	23988755	23988806	(83054912)	+	(GGCGGCG)n	Simple_repeat	1	52	(0)	1133626
16	22.2	0.0	0.0	chr14	24036320	24036361	(83007357)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	1133673
344	36.1	4.0	11.4	chr14	24271824	24272443	(82771275)	+	L2	LINE/L2	1962	2533	(886)	1134000
13	23.5	0.0	0.0	chr14	24316281	24316315	(82727403)	+	(CCG)n	Simple_repeat	1	35	(0)	1134063
218	16.7	0.0	0.0	chr14	24334318	24334353	(82709365)	C	MIR3	SINE/MIR	(87)	121	86	1134090
616	29.4	5.5	0.5	chr14	24351621	24351893	(82691825)	+	LTR41	LTR/ERVL	86	411	(357)	1134122
15	10.8	3.3	0.0	chr14	24377730	24377759	(82665959)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1134169
12	14.4	7.5	2.3	chr14	24377897	24377936	(82665782)	+	GA-rich	Low_complexity	1	43	(0)	1134170
578	28.5	5.0	2.4	chr14	29606887	29607098	(77436620)	+	MIR	SINE/MIR	18	235	(27)	1140734
12	18.1	0.0	3.0	chr14	30875362	30875394	(76168324)	+	(CCAGCC)n	Simple_repeat	1	33	(0)	1142477
826	27.8	10.2	4.9	chr14	31932543	31932950	(75110768)	+	L2	LINE/L2	2615	3046	(373)	1144396
17	18.7	1.9	3.8	chr14	32076735	32076786	(74966932)	+	G-rich	Low_complexity	1	53	(0)	1144636
552	23.4	10.9	0.6	chr14	34085718	34085889	(72957829)	C	MIR3	SINE/MIR	(15)	193	2	1147223
485	32.5	6.2	3.0	chr14	34262824	34263058	(72780660)	+	MIRc	SINE/MIR	11	253	(15)	1147471
5154	11.1	5.0	3.4	chr14	34693173	34693995	(72349723)	+	LTR1A2	LTR/ERV1	1	837	(0)	1148450
509	28.9	6.1	2.1	chr14	35347464	35347700	(71696018)	+	LTR33	LTR/ERVL	44	290	(225)	1149843
17	12.9	0.0	2.8	chr14	35347701	35347736	(71695982)	+	(GGTGCT)n	Simple_repeat	1	36	(0)	1149844
4671	4.9	0.4	0.0	chr14	35347910	35348465	(71695253)	+	LTR6B	LTR/ERV1	1	558	(0)	1149845
3829	16.1	6.1	1.2	chr14	35387267	35388038	(71655680)	C	MER21B	LTR/ERVL	(63)	868	17	1149934
11	23.5	0.0	6.4	chr14	36519375	36519421	(70524297)	+	GA-rich	Low_complexity	1	47	(0)	1151704
28	31.7	0.0	1.1	chr14	41608188	41608279	(65435439)	+	(GT)n	Simple_repeat	1	92	(0)	1158312
1485	22.2	3.0	16.5	chr14	43722840	43723426	(63320292)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1160808
744	20.0	6.8	6.8	chr14	47277060	47277279	(59766439)	+	LTR16A2	LTR/ERVL	275	494	(1)	1165358
2332	7.0	0.7	0.0	chr14	49687713	49687997	(57355721)	C	AluSc	SINE/Alu	(22)	287	1	1168415
13	29.7	1.5	3.0	chr14	49688218	49688282	(57355436)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1168416
17	4.3	0.0	0.0	chr14	50312360	50312383	(56731335)	+	(CTCC)n	Simple_repeat	1	24	(0)	1169748
14	29.8	0.0	3.3	chr14	50944096	50944156	(56099562)	+	(CCCGGC)n	Simple_repeat	1	61	(0)	1170724
6057	5.5	3.0	0.3	chr14	53107750	53108508	(53935210)	+	LTR17	LTR/ERV1	1	780	(0)	1174058
39	22.3	3.6	4.2	chr14	53956783	53956921	(53086797)	+	(CTCC)n	Simple_repeat	1	144	(0)	1175257
1887	18.1	3.0	1.0	chr14	54362125	54362477	(52681241)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1175819
800	21.5	10.7	0.5	chr14	54370153	54370353	(52673365)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	1175833
3825	21.9	7.0	7.9	chr14	55015407	55015699	(52028019)	+	BLACKJACK	DNA/hAT-Blackjack	140	458	(2511)	1176892
2427	9.7	0.0	0.0	chr14	55015700	55015998	(52027720)	C	AluSx	SINE/Alu	(13)	299	1	1176893
219	32.1	1.2	3.6	chr14	55097181	55097264	(51946454)	C	L2	LINE/L2	(670)	2749	2668	1177042
186	32.1	11.7	3.1	chr14	56120609	56120865	(50922853)	C	L2a	LINE/L2	(24)	3402	3121	1178824
501	13.3	1.1	1.1	chr14	56894821	56894911	(50148807)	C	MER5A1	DNA/hAT-Charlie	(18)	148	58	1179918
13	15.1	5.1	2.4	chr14	57268730	57268768	(49774950)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1180525
926	18.8	3.2	1.1	chr14	58008633	58008815	(49034903)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	1181495
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
468	20.7	0.0	0.0	chr14	60165538	60165624	(46878094)	+	AluSz	SINE/Alu	48	134	(178)	1184650
2992	19.2	5.0	0.7	chr14	60174272	60174888	(46868830)	+	LTR9D	LTR/ERV1	1	645	(0)	1184666
2142	24.5	11.4	3.9	chr14	60174889	60175246	(46868472)	+	L2	LINE/L2	2160	2568	(851)	1184665
22	17.3	0.0	0.0	chr14	60646608	60646646	(46397072)	+	A-rich	Low_complexity	1	39	(0)	1185328
30	7.5	0.0	0.0	chr14	61188412	61188453	(45855265)	+	(GGCTCC)n	Simple_repeat	1	42	(0)	1186116
53	0.0	2.0	0.0	chr14	61188607	61188655	(45855063)	+	(GT)n	Simple_repeat	1	50	(0)	1186117
408	24.9	10.1	0.3	chr14	61835576	61835787	(45207931)	C	L1ME3G	LINE/L1	(549)	375	278	1187154
744	25.5	2.6	0.0	chr14	61835947	61836130	(45207588)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1187155
450	31.0	5.9	5.1	chr14	61836214	61836549	(45207169)	C	LTR85a	LTR/Gypsy?	(113)	589	251	1187156
6587	10.9	17.1	0.0	chr14	63802732	63803827	(43239891)	C	LTR12E	LTR/ERV1	(0)	1322	1	1190091
602	17.8	9.4	2.9	chr14	63803828	63803843	(43239875)	C	LTR12D	LTR/ERV1	(256)	998	983	1190092
1997	16.1	11.6	0.8	chr14	63803830	63804198	(43239520)	+	MSTA	LTR/ERVL-MaLR	15	428	(0)	1190093
238	26.3	14.4	0.0	chr14	63852542	63852636	(43191082)	C	MIR3	SINE/MIR	(35)	173	63	1190224
190	31.6	3.1	6.9	chr14	64538549	64538650	(42505068)	+	L2c	LINE/L2	3112	3209	(178)	1191463
4319	7.3	0.7	0.2	chr14	64644703	64645253	(42398465)	+	MER41A	LTR/ERV1	1	554	(0)	1191654
319	27.8	5.7	1.5	chr14	65836998	65837132	(41206586)	C	MER117	DNA/hAT-Charlie	(42)	155	15	1193774
1922	15.4	2.2	5.6	chr14	67452347	67452541	(39591177)	+	THE1B	LTR/ERVL-MaLR	175	364	(0)	1196084
633	28.6	2.5	1.0	chr14	67452624	67452817	(39590901)	+	MIR	SINE/MIR	2	198	(64)	1196087
366	19.0	0.0	6.9	chr14	67458358	67458450	(39585268)	C	L2a	LINE/L2	(5)	3421	3306	1196099
600	23.8	13.0	2.7	chr14	67728253	67728472	(39315246)	C	MIR	SINE/MIR	(0)	262	17	1196635
565	29.3	3.0	1.5	chr14	67728482	67728682	(39315036)	+	MIR	SINE/MIR	50	253	(9)	1196636
750	26.8	4.1	0.9	chr14	67730057	67730271	(39313447)	C	MIR	SINE/MIR	(1)	261	40	1196638
438	24.9	21.5	1.0	chr14	67820209	67820407	(39223311)	+	MIR	SINE/MIR	12	262	(0)	1196779
204	30.9	6.8	2.4	chr14	67908525	67908650	(39135068)	C	L2	LINE/L2	(460)	2959	2828	1196919
331	26.5	4.0	0.0	chr14	67908724	67908833	(39134885)	C	L2c	LINE/L2	(9)	3417	3279	1196920
5528	21.3	2.5	2.0	chr14	68063776	68065287	(38978431)	C	L1M2	LINE/L1	(3909)	3656	2137	1197172
236	22.5	7.7	1.8	chr14	68395760	68395842	(38647876)	+	MIR3	SINE/MIR	27	121	(147)	1197643
423	30.1	14.0	3.5	chr14	68396081	68396283	(38647435)	+	MIRb	SINE/MIR	18	245	(23)	1197644
2181	13.2	2.2	0.0	chr14	68766017	68766320	(38277398)	+	AluSx3	SINE/Alu	1	311	(0)	1198228
12	3.8	6.5	6.1	chr14	68793489	68793519	(38250199)	+	(GTT)n	Simple_repeat	1	33	(0)	1198273
356	33.4	7.5	6.9	chr14	68797592	68797824	(38245894)	+	L2b	LINE/L2	3007	3245	(142)	1198277
14	22.1	2.8	6.8	chr14	68977839	68977910	(38065808)	+	G-rich	Low_complexity	1	74	(0)	1198593
1319	11.6	0.0	0.0	chr14	69503718	69503889	(37539829)	+	AluSx3	SINE/Alu	136	307	(4)	1199644
808	26.8	8.4	1.3	chr14	69503957	69504187	(37539531)	+	MIR	SINE/MIR	12	260	(2)	1199645
678	28.4	4.7	3.0	chr14	69505493	69505724	(37537994)	+	MIRc	SINE/MIR	2	237	(31)	1199649
326	33.7	6.0	5.1	chr14	69625249	69625490	(37418228)	C	MIR1_Amn	SINE/MIR	(18)	244	24	1199910
13	16.7	4.8	2.3	chr14	69638080	69638121	(37405597)	+	(ACAGAA)n	Simple_repeat	1	44	(0)	1199927
2243	21.4	3.0	3.2	chr14	70117580	70118138	(36925580)	+	MER74A	LTR/ERVL	1	558	(0)	1200698
204	31.5	0.0	0.0	chr14	70359196	70359249	(36684469)	+	MIRb	SINE/MIR	117	170	(98)	1201066
10396	13.0	1.3	1.8	chr14	70629183	70630774	(36412944)	+	Tigger2	DNA/TcMar-Tigger	1134	2717	(1)	1201437
2304	8.0	3.0	0.0	chr14	71105554	71105840	(35937878)	C	AluYj4	SINE/Alu	(15)	296	1	1202210
511	26.9	10.9	4.7	chr14	72332349	72332648	(34711070)	C	LTR79	LTR/ERVL	(0)	527	207	1204138
419	26.4	5.9	1.8	chr14	72332853	72333019	(34710699)	C	MIR3	SINE/MIR	(7)	201	32	1204139
463	27.6	4.8	0.9	chr14	72545378	72545550	(34498168)	+	MIR3	SINE/MIR	31	208	(0)	1204450
2466	20.8	5.4	5.8	chr14	73409090	73409671	(33634047)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	1206186
19	3.9	0.0	0.0	chr14	73714419	73714445	(33329273)	+	(CCGCC)n	Simple_repeat	1	27	(0)	1206931
16	27.8	0.0	0.0	chr14	73950046	73950091	(33093627)	+	(CAGCGA)n	Simple_repeat	1	46	(0)	1207453
16	26.8	0.0	0.0	chr14	74242594	74242633	(32801085)	+	(TT)n	Simple_repeat	1	40	(0)	1208094
272	28.0	2.1	2.1	chr14	74362726	74362820	(32680898)	+	MER5A	DNA/hAT-Charlie	8	102	(87)	1208362
2348	6.5	0.0	3.1	chr14	74612929	74613250	(32430468)	C	AluSp	SINE/Alu	(1)	312	1	1208837
1243	24.2	7.8	5.9	chr14	74747236	74747622	(32296096)	+	MLT1I	LTR/ERVL-MaLR	15	409	(2)	1209090
15	21.6	2.3	0.0	chr14	74955452	74955494	(32088224)	+	G-rich	Low_complexity	1	44	(0)	1209463
531	18.7	5.4	2.1	chr14	75064314	75064455	(31979263)	C	L2a	LINE/L2	(0)	3426	3280	1209659
2305	7.4	4.5	0.3	chr14	75293621	75293946	(31749772)	+	AluSx	SINE/Alu	1	312	(0)	1210139
5158	15.8	4.2	2.2	chr14	75480881	75481989	(31561729)	+	L1MC2	LINE/L1	5195	6324	(20)	1210543
227	29.2	2.2	1.1	chr14	75515559	75515648	(31528070)	+	MER5B	DNA/hAT-Charlie	27	117	(61)	1210607
204	20.9	0.0	0.0	chr14	75971445	75971487	(31072231)	C	MIRb	SINE/MIR	(195)	73	31	1211394
259	24.0	8.5	0.0	chr14	76130999	76131073	(30912645)	+	MER63A	DNA/hAT-Blackjack	8	89	(121)	1211670
440	24.7	1.9	12.0	chr14	76340408	76340582	(30703136)	+	MIRb	SINE/MIR	42	198	(70)	1212014
1680	13.6	7.6	1.6	chr14	76785057	76785378	(30258340)	+	L1MA4	LINE/L1	5958	6300	(0)	1212936
12	14.6	0.0	5.9	chr14	76785518	76785551	(30258167)	+	(CCCCAG)n	Simple_repeat	1	34	(0)	1212937
2177	12.0	0.0	1.6	chr14	76911287	76911460	(30132258)	+	AluSg4	SINE/Alu	134	304	(6)	1213188
1854	19.2	5.4	3.1	chr14	76911811	76912191	(30131527)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1213190
11	24.6	0.0	2.5	chr14	76913439	76913478	(30130240)	+	(CCCAGG)n	Simple_repeat	1	40	(0)	1213194
2346	9.7	0.3	0.0	chr14	76930369	76930677	(30113041)	C	AluSx1	SINE/Alu	(2)	310	1	1213230
1834	17.5	8.4	3.9	chr14	76930764	76931054	(30112664)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	156	1213231
531	28.6	6.2	0.0	chr14	77006776	77006943	(30036775)	+	MIR	SINE/MIR	14	192	(70)	1213420
648	11.1	3.9	0.0	chr14	77006945	77007043	(30036675)	C	AluJb	SINE/Alu	(28)	284	182	1213421
198	24.9	9.5	11.7	chr14	77007087	77007299	(30036419)	+	MIRb	SINE/MIR	9	241	(27)	1213422
353	29.2	4.0	0.0	chr14	77278896	77278991	(29764727)	+	MIR3	SINE/MIR	21	120	(88)	1213928
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
322	27.3	21.8	2.9	chr14	78454622	78454937	(28588781)	C	L2c	LINE/L2	(126)	3261	2874	1216256
19676	17.1	3.1	1.1	chr14	80434212	80438303	(26605415)	+	L1M1	LINE/L1	12	4196	(3369)	1219208
24	30.4	0.0	0.0	chr14	81435659	81435722	(25607996)	+	(AC)n	Simple_repeat	1	64	(0)	1220622
15	34.0	1.1	3.2	chr14	88562934	88563026	(18480692)	+	G-rich	Low_complexity	1	94	(0)	1230629
414	26.4	12.6	1.2	chr14	89025635	89025795	(18017923)	+	MIR	SINE/MIR	8	189	(73)	1231395
43	0.0	0.0	0.0	chr14	89028039	89028075	(18015643)	+	(CA)n	Simple_repeat	1	37	(0)	1231398
24	15.7	0.0	6.2	chr14	89417243	89417319	(17626399)	+	GA-rich	Low_complexity	1	72	(0)	1232039
263	28.5	2.2	11.0	chr14	89519835	89519980	(17523738)	+	L1ME1	LINE/L1	289	421	(5888)	1232227
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
300	23.9	8.9	0.0	chr14	90491856	90491947	(16551771)	C	MIR3	SINE/MIR	(26)	182	82	1234024
378	34.4	12.8	4.5	chr14	90495027	90495361	(16548357)	C	L2c	LINE/L2	(0)	3387	3021	1234032
10511	10.5	1.6	9.0	chr14	91426757	91427981	(15615737)	+	THE1B-int	LTR/ERVL-MaLR	427	1580	(0)	1235673
632	25.1	5.7	4.2	chr14	92384841	92385081	(14658637)	+	MIR	SINE/MIR	3	247	(15)	1237464
27611	9.6	1.0	0.8	chr14	93559840	93564517	(13479201)	C	HERVH-int	LTR/ERV1	(0)	7713	3095	1239661
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
305	27.6	2.8	0.9	chr14	94581655	94581760	(12461958)	+	MIRb	SINE/MIR	86	193	(75)	1241371
733	20.2	6.7	1.2	chr14	94581783	94581952	(12461766)	+	MER20	DNA/hAT-Charlie	40	219	(0)	1241372
237	21.0	0.0	10.4	chr14	95286696	95286813	(11756905)	C	L2a	LINE/L2	(265)	3110	3015	1242722
44	0.0	0.0	0.0	chr14	95319304	95319341	(11724377)	+	(CA)n	Simple_repeat	1	38	(0)	1242775
19063	9.9	4.1	2.2	chr14	95973433	95976369	(11067349)	+	HERVH-int	LTR/ERV1	1	2995	(4718)	1244040
6238	8.8	0.2	0.2	chr14	95976349	95977202	(11066516)	+	HERVH-int	LTR/ERV1	3140	3993	(3720)	1244040
212	33.6	15.1	2.2	chr14	96205597	96205821	(10837897)	+	MIRb	SINE/MIR	1	259	(9)	1244437
35	16.6	0.0	0.0	chr14	96235786	96235846	(10807872)	+	(CA)n	Simple_repeat	1	61	(0)	1244513
16	13.8	13.2	2.3	chr14	96235847	96235857	(10807861)	+	(CATGCA)n	Simple_repeat	5	86	(0)	1244514
237	34.6	6.9	4.9	chr14	96235889	96236073	(10807645)	+	MIRb	SINE/MIR	4	192	(76)	1244515
12	18.0	0.0	7.0	chr14	96363020	96363062	(10680656)	+	(CGGCTC)n	Simple_repeat	1	43	(0)	1244738
386	24.7	5.8	6.9	chr14	96728352	96728525	(10315193)	+	MIRc	SINE/MIR	9	180	(88)	1245399
278	33.8	5.3	3.9	chr14	96728717	96728931	(10314787)	+	L2b	LINE/L2	3203	3425	(1)	1245400
19	8.3	0.0	8.7	chr14	99118399	99118444	(7925274)	+	(TGTTTTT)n	Simple_repeat	1	46	(0)	1249523
615	21.8	1.6	0.0	chr14	99118742	99118865	(7924853)	C	MIR	SINE/MIR	(74)	188	63	1249525
252	32.9	9.5	2.0	chr14	99120360	99120505	(7923213)	+	MIRb	SINE/MIR	97	254	(14)	1249530
210	17.6	7.5	0.0	chr14	99253539	99253617	(7790101)	C	MIRb	SINE/MIR	(125)	143	51	1249731
26	21.6	0.0	0.0	chr14	99272350	99272403	(7771315)	+	(CA)n	Simple_repeat	1	54	(0)	1249759
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
185	36.1	1.6	0.0	chr14	99546171	99546231	(7497487)	C	L2b	LINE/L2	(5)	3370	3309	1250180
17	17.5	4.4	0.0	chr14	99602209	99602253	(7441465)	+	G-rich	Low_complexity	1	47	(0)	1250255
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
272	30.2	8.5	4.4	chr14	99645601	99645735	(7397983)	+	MIR3	SINE/MIR	26	166	(42)	1250353
498	21.9	0.0	5.9	chr14	99667215	99667357	(7376361)	+	MIRc	SINE/MIR	29	157	(73)	1250400
301	27.4	5.0	3.1	chr14	99968886	99968983	(7074735)	+	MIR3	SINE/MIR	108	207	(1)	1250927
427	29.8	11.8	2.6	chr14	100221769	100222210	(6821508)	C	L2c	LINE/L2	(97)	3290	2803	1251465
851	27.5	17.0	1.5	chr14	100222311	100222772	(6820946)	C	LTR67B	LTR/ERVL	(31)	589	42	1251466
2177	8.8	0.7	0.0	chr14	100284758	100285042	(6758676)	+	AluSx	SINE/Alu	1	287	(25)	1251597
363	29.0	10.6	5.9	chr14	101623611	101624554	(5419164)	+	L2b	LINE/L2	2350	3332	(43)	1253412
2289	7.7	0.0	0.7	chr14	102090451	102090750	(4952968)	C	AluY	SINE/Alu	(13)	298	1	1254200
638	27.0	4.5	0.2	chr14	102090880	102091064	(4952654)	+	MIR	SINE/MIR	6	202	(66)	1254201
286	20.7	2.2	6.5	chr14	102911627	102911719	(4131999)	+	MER45A	DNA/hAT-Tip100	58	146	(32)	1255889
297	27.2	16.4	3.1	chr14	102911839	102912001	(4131717)	+	MIRc	SINE/MIR	5	193	(75)	1255890
15	20.5	1.4	0.0	chr14	103220568	103220607	(3823111)	+	G-rich	Low_complexity	1	40	(0)	1256388
1396	9.7	1.4	1.8	chr14	103361604	103361824	(3681894)	C	Tigger7	DNA/TcMar-Tigger	(78)	2413	2194	1256645
2011	19.5	2.2	0.3	chr14	103361818	103362166	(3681552)	C	Tigger7	DNA/TcMar-Tigger	(2135)	356	1	1256646
2070	20.6	8.6	4.2	chr14	103362173	103362627	(3681091)	C	L1M4c	LINE/L1	(4279)	2367	1883	1256647
962	15.9	12.7	3.4	chr14	103606771	103607005	(3436713)	C	AluJr	SINE/Alu	(0)	312	82	1257142
387	21.6	5.7	3.3	chr14	103607157	103607276	(3436442)	+	MLT1C	LTR/ERVL-MaLR	338	460	(7)	1257143
629	28.3	14.2	1.3	chr14	103613659	103613959	(3429759)	+	L1MC4	LINE/L1	7547	7892	(150)	1257158
360	18.3	0.0	0.0	chr14	103614004	103614063	(3429655)	+	AluY	SINE/Alu	1	60	(241)	1257159
19	9.1	2.6	2.6	chr14	103614157	103614194	(3429524)	+	(TTCC)n	Simple_repeat	1	39	(0)	1257160
2312	6.8	0.0	0.4	chr14	103614486	103614764	(3428954)	+	AluSc	SINE/Alu	24	301	(8)	1257161
68	18.8	0.0	0.0	chr14	104150111	104150240	(2893478)	+	(CCTCCT)n	Simple_repeat	1	130	(0)	1258144
16	18.8	5.8	3.6	chr14	104774159	104774210	(2269508)	+	(CA)n	Simple_repeat	1	55	(0)	1258803
301	34.6	10.7	2.2	chr14	104799432	104799567	(2244151)	+	MIR	SINE/MIR	36	184	(78)	1258823
23	23.4	3.6	6.0	chr14	104800794	104800905	(2242813)	+	(CGG)n	Simple_repeat	1	116	(0)	1258826
23	19.9	0.0	3.3	chr14	104826530	104826590	(2217128)	+	(CCCGCGC)n	Simple_repeat	1	61	(0)	1258876
210	36.5	4.0	3.3	chr14	104844036	104844185	(2199533)	+	OldhAT1	DNA/hAT-Ac	2576	2726	(122)	1258913
183	22.9	7.7	0.0	chr14	104934384	104934431	(2109287)	C	MIRb	SINE/MIR	(191)	77	26	1259014
14	19.9	6.6	3.1	chr14	105398207	105398267	(1645451)	+	(CGCCC)n	Simple_repeat	1	65	(0)	1259622
2546	6.8	0.0	0.0	chr15	22785786	22786095	(79205094)	C	AluY	SINE/Alu	(0)	311	2	1266287
1959	15.6	0.7	1.6	chr15	22863069	22863382	(79127807)	C	AluSz6	SINE/Alu	(0)	312	2	1266456
345	32.5	3.5	12.2	chr15	22863384	22863695	(79127494)	C	L1MEg	LINE/L1	(5693)	391	108	1266454
277	31.1	9.0	1.5	chr15	22863681	22863935	(79127254)	C	L1MEg	LINE/L1	(5765)	1785	1593	1266457
291	19.3	0.0	1.7	chr15	25509454	25509511	(76481678)	C	MER94B	DNA/hAT-Blackjack	(68)	65	9	1270096
5741	8.0	1.4	4.1	chr15	26029425	26029748	(75961441)	C	MER4E1	LTR/ERV1	(0)	781	452	1270913
1972	9.7	2.5	0.4	chr15	26029749	26030016	(75961173)	+	AluSx1	SINE/Alu	1	274	(38)	1270914
12	4.0	7.1	3.3	chr15	26670488	26670515	(75320674)	+	(GGGAA)n	Simple_repeat	1	30	(0)	1271756
723	30.9	12.4	4.8	chr15	27587464	27587959	(74403230)	C	L2	LINE/L2	(2617)	802	264	1272806
213	28.8	16.8	6.2	chr15	28933749	28934022	(73057167)	C	L2c	LINE/L2	(26)	3349	3041	1274753
12	9.5	0.0	4.0	chr15	29676027	29676051	(72315138)	+	(GAGG)n	Simple_repeat	1	25	(0)	1275855
2228	21.6	16.8	0.8	chr15	30761329	30761939	(71229250)	C	LTR9A1	LTR/ERV1	(0)	728	1	1277579
4081	23.3	6.5	6.7	chr15	30761940	30762456	(71228733)	+	L1MEc	LINE/L1	708	1193	(5207)	1277577
973	26.2	2.0	10.3	chr15	30885640	30885958	(71105231)	+	MLT-int	LTR/ERVL-MaLR	499	790	(945)	1277800
1012	19.5	10.0	1.8	chr15	30886082	30886343	(71104846)	+	MLT-int	LTR/ERVL-MaLR	1222	1537	(198)	1277800
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
1313	22.3	7.2	0.9	chr15	31078831	31079169	(70912020)	+	L1MC4	LINE/L1	6317	6678	(1204)	1278057
2023	23.1	8.7	1.6	chr15	31079194	31079694	(70911495)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	21	1278058
2226	14.4	8.2	0.7	chr15	31222613	31223030	(70768159)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2267	1278305
361	20.6	2.9	0.0	chr15	31223014	31223081	(70768108)	C	MER8	DNA/TcMar-Tigger	(169)	70	1	1278306
3647	9.3	0.2	7.7	chr15	31396458	31397029	(70594160)	C	LTR8	LTR/ERV1	(162)	529	1	1278540
25	25.8	1.4	0.0	chr15	31397218	31397288	(70593901)	+	G-rich	Low_complexity	1	72	(0)	1278541
4951	10.6	6.5	2.2	chr15	31887310	31888073	(70103116)	C	LTR1A1	LTR/ERV1	(0)	799	1	1279149
2014	7.7	0.0	0.4	chr15	34224529	34224776	(67766413)	C	AluSq2	SINE/Alu	(16)	297	51	1282509
207	32.9	5.6	8.6	chr15	35522115	35522300	(66468889)	+	L3b	LINE/CR1	4656	4835	(397)	1284474
1051	30.2	6.0	0.6	chr15	38732610	38732939	(63258250)	C	LTR33	LTR/ERVL	(166)	349	1	1288779
17	20.9	0.0	1.3	chr15	39438797	39438843	(62552346)	+	A-rich	Low_complexity	1	46	(0)	1289684
1406	16.0	7.8	2.7	chr15	39807629	39807933	(62183256)	C	MER33	DNA/hAT-Charlie	(10)	314	3	1290203
443	30.0	10.3	1.7	chr15	39807936	39808237	(62182952)	+	L2a	LINE/L2	2064	2394	(1025)	1290202
184	26.0	0.0	3.9	chr15	40083525	40083576	(61907613)	C	OldhAT1	DNA/hAT-Ac	(548)	2300	2251	1290657
41	0.0	2.6	0.0	chr15	40106514	40106552	(61884637)	+	(CA)n	Simple_repeat	1	40	(0)	1290686
15	10.7	0.0	5.9	chr15	40110987	40111037	(61880152)	+	(CTTC)n	Simple_repeat	1	48	(0)	1290692
14	21.0	3.9	1.9	chr15	40290886	40290936	(61700253)	+	G-rich	Low_complexity	1	53	(0)	1290974
12	26.4	0.0	5.5	chr15	40323531	40323585	(61667604)	+	(GGCTCCC)n	Simple_repeat	1	55	(0)	1291015
14	13.1	0.0	0.0	chr15	41231305	41231330	(60759859)	+	(CCCT)n	Simple_repeat	1	26	(0)	1292845
17	17.4	3.0	7.2	chr15	41972413	41972419	(60018770)	+	(GCCC)n	Simple_repeat	1	20	(49)	1294334
14	22.1	4.3	0.0	chr15	41972420	41972466	(60018723)	+	(CGTCCG)n	Simple_repeat	1	49	(0)	1294335
17	17.4	3.0	7.2	chr15	41972467	41972479	(60018710)	+	(GCCC)n	Simple_repeat	21	69	(0)	1294334
195	31.9	7.8	0.0	chr15	41998038	41998131	(59993058)	+	L2c	LINE/L2	3026	3127	(260)	1294384
12	23.1	5.1	3.2	chr15	42491090	42491148	(59500041)	+	(CCGCCG)n	Simple_repeat	1	62	(0)	1295211
530	22.4	15.3	1.4	chr15	43133302	43133514	(58857675)	C	MIRc	SINE/MIR	(17)	251	4	1296446
12	31.9	0.0	0.0	chr15	43133656	43133702	(58857487)	+	(GGCCCC)n	Simple_repeat	1	47	(0)	1296447
5923	11.6	9.4	1.6	chr15	45829031	45830043	(56161146)	C	MER52C	LTR/ERV1	(175)	1103	3	1301427
289	26.3	2.1	1.0	chr15	50210021	50210116	(51781073)	+	HAL1	LINE/L1	273	369	(2138)	1307283
11673	9.2	1.9	0.3	chr15	50210131	50211789	(51779400)	+	L1PB1	LINE/L1	6	1928	(4935)	1307284
36345	9.0	1.6	2.5	chr15	52738990	52744189	(49247000)	+	HERVH-int	LTR/ERV1	1	5149	(2564)	1311812
515	22.0	11.8	7.0	chr15	55319411	55319610	(46671579)	C	MER102b	DNA/hAT-Charlie	(59)	282	72	1315309
249	33.2	13.9	6.0	chr15	56366084	56366432	(45624757)	+	L2a	LINE/L2	2658	3038	(381)	1317029
281	31.1	13.4	1.9	chr15	56366467	56366676	(45624513)	+	L2a	LINE/L2	3145	3382	(44)	1317029
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
1090	21.2	2.3	0.4	chr15	57372142	57372401	(44618788)	+	LTR16E1	LTR/ERVL	274	538	(0)	1318595
1680	23.2	11.1	4.1	chr15	58256216	58256916	(43734273)	+	HAL1	LINE/L1	843	1598	(909)	1319851
1133	21.2	4.0	2.4	chr15	58256973	58257267	(43733922)	+	MLT1D	LTR/ERVL-MaLR	206	505	(0)	1319852
2133	7.7	0.0	0.0	chr15	58389335	58389594	(43601595)	C	AluSc8	SINE/Alu	(21)	290	31	1320084
518	26.0	11.3	2.6	chr15	58389810	58390042	(43601147)	+	MIRb	SINE/MIR	13	268	(0)	1320085
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
2091	20.4	5.0	1.7	chr15	58867538	58868006	(43123183)	C	MLT1D	LTR/ERVL-MaLR	(20)	485	1	1320991
392	29.8	18.3	4.9	chr15	58949582	58949951	(43041238)	C	L2c	LINE/L2	(26)	3361	2931	1321138
201	23.8	0.0	0.0	chr15	58949975	58950016	(43041173)	C	L2c	LINE/L2	(655)	2764	2723	1321138
720	23.0	0.0	0.0	chr15	58950214	58950339	(43040850)	+	FLAM_A	SINE/Alu	1	126	(16)	1321139
185	30.0	0.0	0.0	chr15	58950390	58950439	(43040750)	+	L2	LINE/L2	1851	1900	(1519)	1321140
2089	13.2	0.3	3.0	chr15	58950441	58950742	(43040447)	C	AluJb	SINE/Alu	(14)	298	5	1321141
270	23.3	1.6	0.0	chr15	59348015	59348074	(42643115)	+	MER5A1	DNA/hAT-Charlie	43	103	(63)	1321870
14	4.5	0.0	4.0	chr15	59997380	59997404	(41993785)	+	(CTTT)n	Simple_repeat	1	25	(0)	1323095
191	29.0	3.8	10.7	chr15	60521085	60521196	(41469993)	+	MER5B	DNA/hAT-Charlie	25	128	(50)	1323939
671	25.6	8.4	0.0	chr15	60724262	60724456	(41266733)	C	MIR	SINE/MIR	(10)	252	40	1324229
190	26.0	2.8	15.4	chr15	60724688	60724810	(41266379)	+	L2c	LINE/L2	3281	3387	(0)	1324230
470	25.8	13.5	0.6	chr15	60805426	60805637	(41185552)	+	MIR	SINE/MIR	17	256	(6)	1324345
284	35.2	9.6	1.4	chr15	60805718	60805861	(41185328)	+	MIR3	SINE/MIR	29	185	(23)	1324346
883	22.0	1.4	6.3	chr15	62853759	62853981	(39137208)	C	MER58C	DNA/hAT-Charlie	(0)	215	4	1327499
403	21.9	8.2	0.8	chr15	62854004	62854127	(39137062)	+	MIRb	SINE/MIR	15	148	(120)	1327500
361	30.0	9.6	2.2	chr15	63072872	63073055	(38918134)	+	MIR	SINE/MIR	35	233	(29)	1327897
585	25.4	5.4	5.4	chr15	63433329	63433569	(38557620)	+	L2a	LINE/L2	2443	2683	(736)	1328545
1723	19.1	0.3	4.9	chr15	63433586	63433944	(38557245)	C	Charlie4a	DNA/hAT-Charlie	(63)	445	101	1328546
248	28.1	12.9	0.8	chr15	63503663	63503784	(38487405)	+	MIRb	SINE/MIR	123	261	(7)	1328721
1110	27.0	9.4	5.3	chr15	63561275	63561783	(38429406)	C	MLT1N2	LTR/ERVL-MaLR	(9)	553	22	1328793
14	16.8	4.7	2.2	chr15	63870827	63870869	(38120320)	+	(CTCAGAG)n	Simple_repeat	1	45	(0)	1329297
348	25.9	13.5	2.5	chr15	63870875	63871033	(38120156)	C	MIRc	SINE/MIR	(25)	183	6	1329298
476	28.5	6.8	1.3	chr15	63914565	63914888	(38076301)	+	L2a	LINE/L2	2819	3208	(218)	1329386
342	26.4	7.1	2.7	chr15	64024343	64024490	(37966699)	+	LTR85c	LTR/Gypsy?	669	823	(0)	1329590
256	25.3	17.5	0.7	chr15	64024503	64024649	(37966540)	C	MIRb	SINE/MIR	(87)	181	5	1329591
15	16.5	0.0	2.8	chr15	64151176	64151211	(37839978)	+	(ATGA)n	Simple_repeat	1	36	(0)	1329859
11	21.0	2.5	2.4	chr15	64807795	64807834	(37183355)	+	(GCCCCT)n	Simple_repeat	1	41	(0)	1331250
12	24.0	0.0	2.4	chr15	64807960	64808000	(37183189)	+	(GAGGCT)n	Simple_repeat	1	41	(0)	1331251
374	31.7	3.1	0.8	chr15	64809134	64809257	(37181932)	C	MIR	SINE/MIR	(113)	149	23	1331254
3782	15.7	11.2	1.2	chr15	64811058	64811831	(37179358)	+	MER21B	LTR/ERVL	1	862	(6)	1331259
375	19.1	8.3	0.0	chr15	64923457	64923566	(37067623)	+	Charlie4a	DNA/hAT-Charlie	377	496	(12)	1331522
13	7.4	6.5	3.0	chr15	64923760	64923790	(37067399)	+	(CTGGC)n	Simple_repeat	1	33	(0)	1331523
2101	9.3	3.9	3.0	chr15	65000167	65000498	(36990691)	C	L1PA11	LINE/L1	(0)	6174	5840	1331681
198	34.2	10.5	2.6	chr15	65000512	65000781	(36990408)	+	L2c	LINE/L2	2726	3019	(400)	1331682
263	23.4	11.2	0.9	chr15	65028973	65029084	(36962105)	+	MIRb	SINE/MIR	27	151	(117)	1331739
13	19.8	2.4	2.3	chr15	65112490	65112531	(36878658)	+	G-rich	Low_complexity	1	43	(0)	1331913
8463	10.8	11.0	1.7	chr15	65300211	65301637	(36689552)	C	LTR12C	LTR/ERV1	(0)	1579	3	1332337
488	25.4	4.6	1.5	chr15	65423591	65423748	(36567441)	C	MIRc	SINE/MIR	(67)	163	2	1332588
2284	11.1	0.0	1.3	chr15	65435359	65435664	(36555525)	+	AluSz	SINE/Alu	1	302	(10)	1332624
296	27.7	15.4	1.4	chr15	65436012	65436150	(36555039)	C	MIRb	SINE/MIR	(82)	186	25	1332625
564	28.5	3.4	4.8	chr15	65982603	65982812	(36008377)	C	MamRep1879	DNA/hAT-Tip100?	(4)	212	6	1333743
247	35.3	5.5	0.8	chr15	66497390	66497509	(35493680)	+	MER5A	DNA/hAT-Charlie	63	188	(1)	1334818
867	28.1	11.6	7.1	chr15	66743577	66744151	(35247038)	C	L1ME4a	LINE/L1	(0)	6124	5521	1335376
192	34.5	3.2	4.8	chr15	66744284	66744408	(35246781)	C	L2b	LINE/L2	(18)	3357	3235	1335377
184	31.7	4.8	0.0	chr15	66744503	66744562	(35246627)	+	L2b	LINE/L2	3307	3369	(6)	1335378
916	22.9	13.8	3.0	chr15	66922569	66923061	(35068128)	+	LTR50	LTR/ERVL	1	639	(156)	1335714
366	30.5	15.3	3.7	chr15	67063858	67064075	(34927114)	+	MIRb	SINE/MIR	7	254	(14)	1336012
729	26.4	4.5	1.7	chr15	67092029	67092263	(34898926)	C	LTR33A_	LTR/ERVL	(289)	242	1	1336060
822	22.0	2.1	1.1	chr15	67092408	67092591	(34898598)	+	MER5A	DNA/hAT-Charlie	1	186	(3)	1336061
217	34.6	6.5	4.2	chr15	67296213	67296453	(34694736)	C	L2c	LINE/L2	(224)	3163	2917	1336385
286	31.2	10.7	3.1	chr15	67825557	67825685	(34165504)	+	MIR3	SINE/MIR	17	156	(52)	1337186
2251	9.7	1.3	1.0	chr15	68227028	68227338	(33763851)	C	AluSz6	SINE/Alu	(0)	312	1	1337955
185	16.7	0.0	0.0	chr15	68227393	68227422	(33763767)	+	L3	LINE/CR1	3929	3958	(141)	1337956
1359	23.1	15.1	0.5	chr15	68507468	68507867	(33483322)	+	MLT2B2	LTR/ERVL	47	515	(0)	1338474
473	29.6	5.3	0.6	chr15	68558787	68558949	(33432240)	+	MIRb	SINE/MIR	41	211	(57)	1338557
192	31.3	0.0	2.9	chr15	68559007	68559075	(33432114)	C	L2a	LINE/L2	(1)	3425	3359	1338558
407	34.5	2.9	0.0	chr15	68580005	68580204	(33410985)	+	MIRc	SINE/MIR	11	216	(52)	1338607
243	30.1	8.0	0.0	chr15	68640858	68640960	(33350229)	C	MIR1_Amn	SINE/MIR	(94)	136	25	1338739
13	24.2	1.9	3.8	chr15	68700832	68700883	(33290306)	+	G-rich	Low_complexity	1	53	(0)	1338871
822	10.5	0.0	0.0	chr15	68701961	68702065	(33289124)	+	AluSx	SINE/Alu	1	105	(207)	1338876
363	20.0	3.2	0.0	chr15	68702190	68702279	(33288910)	+	MIR	SINE/MIR	48	140	(122)	1338877
267	18.3	11.8	4.7	chr15	69074759	69074844	(32916345)	C	MamTip1	DNA/hAT-Tip100	(0)	267	175	1339573
297	37.3	3.4	4.7	chr15	69075090	69075300	(32915889)	+	L2b	LINE/L2	3148	3355	(20)	1339574
317	33.0	2.0	0.0	chr15	69130492	69130588	(32860601)	+	MIR3	SINE/MIR	57	155	(53)	1339689
180	25.9	3.6	0.0	chr15	69277496	69277549	(32713640)	C	MIR3	SINE/MIR	(132)	76	21	1339913
1035	24.9	6.4	2.0	chr15	69321255	69321611	(32669578)	C	L1MC5	LINE/L1	(1)	9303	8930	1339994
375	28.6	13.3	4.9	chr15	69893729	69893974	(32097215)	C	LTR88b	LTR/Gypsy?	(425)	391	122	1341099
20	0.0	0.0	0.0	chr15	70101681	70101702	(31889487)	+	(A)n	Simple_repeat	1	22	(0)	1341469
624	27.4	7.4	7.4	chr15	70111202	70111243	(31879946)	+	LTR16A	LTR/ERVL	409	451	(0)	1341484
11	20.9	6.8	0.0	chr15	70362449	70362492	(31628697)	+	(GATTCCA)n	Simple_repeat	1	47	(0)	1342013
219	33.3	5.8	2.2	chr15	70489182	70489362	(31501827)	C	L2	LINE/L2	(616)	2803	2616	1342245
521	23.1	16.2	2.8	chr15	70631801	70632018	(31359171)	+	L3	LINE/CR1	1649	1901	(2198)	1342505
5133	18.0	2.4	5.5	chr15	71384399	71385373	(30605816)	C	MER57A-int	LTR/ERV1	(5226)	961	3	1343642
600	26.5	10.2	2.6	chr15	71503082	71503366	(30487823)	C	L2a	LINE/L2	(228)	3198	2887	1343835
22	25.6	2.2	4.3	chr15	72197777	72197867	(29793322)	+	(CGCC)n	Simple_repeat	1	93	(0)	1345070
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
14	23.4	3.0	5.8	chr15	73052019	73052085	(28939104)	+	GA-rich	Low_complexity	1	69	(0)	1346523
13	21.6	0.0	0.0	chr15	73368162	73368193	(28622996)	+	(CCT)n	Simple_repeat	1	32	(0)	1347010
18	16.5	0.9	8.2	chr15	73368271	73368329	(28622860)	+	G-rich	Low_complexity	1	54	(0)	1347011
16	16.9	0.0	0.0	chr15	73368510	73368542	(28622647)	+	(CCCT)n	Simple_repeat	1	33	(0)	1347012
519	23.6	2.4	7.6	chr15	73683422	73683626	(28307563)	+	MIRb	SINE/MIR	66	260	(8)	1347535
730	32.6	11.6	3.3	chr15	73691180	73691670	(28299519)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	49	1347554
417	25.4	8.3	4.8	chr15	73953006	73953191	(28037998)	+	MIRc	SINE/MIR	16	208	(60)	1347990
2232	11.8	0.0	0.0	chr15	74054843	74055139	(27936050)	C	AluSx	SINE/Alu	(15)	297	1	1348182
251	33.5	7.1	5.4	chr15	74212611	74212679	(27778510)	+	MIR3	SINE/MIR	34	98	(110)	1348450
3509	15.5	5.1	3.9	chr15	74212680	74212936	(27778253)	+	MER39B	LTR/ERV1	1	273	(380)	1348451
183	27.5	7.6	8.4	chr15	74213836	74213954	(27777235)	C	MIR3	SINE/MIR	(87)	121	4	1348453
181	31.4	1.9	0.0	chr15	74213922	74213972	(27777217)	+	MIRc	SINE/MIR	102	153	(115)	1348454
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
265	27.8	17.4	0.0	chr15	74306848	74306980	(27684209)	+	MIR3	SINE/MIR	6	166	(42)	1348627
12	14.0	6.2	0.0	chr15	74323000	74323031	(27668158)	+	(GCCCCT)n	Simple_repeat	1	34	(0)	1348652
234	16.3	2.3	0.0	chr15	74598401	74598443	(27392746)	C	MLT1K	LTR/ERVL-MaLR	(417)	178	135	1349162
14	18.9	2.2	4.3	chr15	74598758	74598803	(27392386)	+	(GGAGCT)n	Simple_repeat	1	47	(0)	1349163
190	30.2	19.6	1.1	chr15	74724362	74724448	(27266741)	+	MIR3	SINE/MIR	30	136	(72)	1349373
16	26.4	5.6	0.0	chr15	74826536	74826607	(27164582)	+	G-rich	Low_complexity	1	76	(0)	1349591
15	23.0	0.0	0.0	chr15	74826648	74826688	(27164501)	+	(GTGCCCG)n	Simple_repeat	1	41	(0)	1349592
399	24.7	1.4	2.7	chr15	75178286	75178435	(26812754)	+	MamRep1879	DNA/hAT-Tip100?	69	216	(0)	1350348
11	13.0	8.8	0.0	chr15	75348666	75348699	(26642490)	+	(CCAGCTC)n	Simple_repeat	1	37	(0)	1350629
184	29.8	1.7	0.0	chr15	75348789	75348845	(26642344)	+	MIRb	SINE/MIR	119	176	(92)	1350630
12	11.6	3.3	3.2	chr15	75648019	75648048	(26343141)	+	(GGAC)n	Simple_repeat	1	31	(0)	1351302
313	33.0	7.0	6.1	chr15	75713456	75713652	(26277537)	C	MIRc	SINE/MIR	(68)	200	2	1351392
29	0.0	0.0	0.0	chr15	75731882	75731906	(26259283)	+	(CT)n	Simple_repeat	1	25	(0)	1351422
12	18.9	7.1	0.0	chr15	75738638	75738679	(26252510)	+	(GCCCCA)n	Simple_repeat	1	45	(0)	1351436
877	18.2	0.7	0.7	chr15	75774136	75774290	(26216899)	C	MER5A	DNA/hAT-Charlie	(33)	156	2	1351494
406	28.5	3.6	12.3	chr15	76311786	76311932	(25679257)	+	L2b	LINE/L2	3164	3311	(76)	1352366
19	13.2	0.0	6.4	chr15	76335895	76335943	(25655246)	+	A-rich	Low_complexity	1	45	(0)	1352419
25	27.4	0.0	2.4	chr15	76335943	76336024	(25655165)	+	GA-rich	Low_complexity	1	82	(0)	1352420
3124	25.3	12.2	2.1	chr15	76990748	76991599	(24999590)	+	MER45C	DNA/hAT-Tip100	1	950	(3)	1353365
13	15.4	0.0	3.2	chr15	77478546	77478576	(24512613)	+	(GGTGT)n	Simple_repeat	1	31	(0)	1354115
270	33.2	2.9	12.6	chr15	77503202	77503432	(24487757)	+	MIR3	SINE/MIR	1	208	(0)	1354157
263	26.1	1.5	0.0	chr15	77503586	77503650	(24487539)	C	MIR1_Amn	SINE/MIR	(69)	161	96	1354158
12	9.8	0.0	0.0	chr15	77510915	77510936	(24480253)	+	(CTTC)n	Simple_repeat	1	22	(0)	1354177
813	17.5	13.2	0.0	chr15	77538713	77538889	(24452300)	C	MER3	DNA/hAT-Charlie	(5)	204	1	1354232
18	23.9	3.7	4.7	chr15	77541896	77541977	(24449212)	+	(TCC)n	Simple_repeat	1	85	(0)	1354237
213	29.2	1.1	2.2	chr15	77543593	77543683	(24447506)	C	MIR1_Amn	SINE/MIR	(103)	127	38	1354239
523	36.5	6.7	3.3	chr15	77611339	77611582	(24379607)	C	MIRb	SINE/MIR	(10)	258	6	1354350
245	30.0	12.8	3.0	chr15	77687603	77687736	(24303453)	+	Tigger19a	DNA/TcMar-Tigger	166	314	(9)	1354467
344	33.2	1.7	0.9	chr15	77702489	77702622	(24288567)	C	MIRb	SINE/MIR	(18)	250	116	1354500
216	34.5	4.4	1.1	chr15	77821123	77821210	(24169979)	C	L2c	LINE/L2	(3)	3384	3294	1354736
493	31.1	1.8	0.6	chr15	77821235	77821399	(24169790)	C	L2c	LINE/L2	(216)	3171	3005	1354736
184	31.2	4.3	7.7	chr15	78129458	78129627	(23861562)	+	L2c	LINE/L2	3027	3190	(197)	1355263
16	22.3	2.0	2.0	chr15	78149437	78149485	(23841704)	+	(GCAG)n	Simple_repeat	1	50	(0)	1355315
2453	7.6	0.3	0.0	chr15	78388650	78388951	(23602238)	+	AluSp	SINE/Alu	1	303	(10)	1355775
253	30.3	12.4	8.0	chr15	78395824	78396023	(23595166)	C	MIR3	SINE/MIR	(15)	215	2	1355789
253	27.5	16.7	0.0	chr15	78654209	78654328	(23336861)	+	LTR89	LTR/ERVL?	1	144	(735)	1356348
500	26.1	2.0	1.7	chr15	78654431	78654630	(23336559)	+	MIR	SINE/MIR	3	204	(64)	1356349
12	20.2	3.5	6.7	chr15	78811266	78811323	(23179866)	+	(GTCCG)n	Simple_repeat	1	60	(0)	1356625
25	11.8	0.0	4.0	chr15	78811423	78811472	(23179717)	+	A-rich	Low_complexity	1	50	(0)	1356626
21884	15.2	2.4	1.0	chr15	79779746	79784248	(22206941)	+	L1PA12	LINE/L1	4	5328	(2253)	1358362
13	18.9	2.8	0.0	chr15	80404686	80404721	(21586468)	+	(CAGCAT)n	Simple_repeat	1	37	(0)	1359479
330	36.4	3.2	4.7	chr15	80559945	80560264	(21430925)	+	L2c	LINE/L2	3000	3314	(73)	1359699
22	21.1	0.0	0.0	chr15	82043346	82043394	(19947795)	+	GA-rich	Low_complexity	1	49	(0)	1362231
18	8.3	4.8	4.5	chr15	82045086	82045127	(19946062)	+	(TCC)n	Simple_repeat	1	44	(0)	1362233
12	14.1	0.0	8.1	chr15	82647385	82647421	(19343768)	+	(CCCG)n	Simple_repeat	1	37	(0)	1363212
213	25.0	13.1	2.0	chr15	82648182	82648283	(19342906)	+	MIR3	SINE/MIR	33	147	(61)	1363214
416	28.9	17.2	3.9	chr15	82943117	82943296	(19047893)	C	MIRb	SINE/MIR	(1)	267	59	1363721
310	38.5	0.0	3.0	chr15	82943357	82943522	(19047667)	C	L3	LINE/CR1	(153)	3946	3786	1363722
1957	16.8	5.5	3.7	chr15	83504337	83504876	(18486313)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	1364738
28	3.3	0.0	0.0	chr15	84571038	84571068	(17420121)	+	(CCCTCAC)n	Simple_repeat	1	31	(0)	1366184
904	13.4	3.2	1.1	chr15	84654558	84654738	(17336451)	C	MER53	DNA/hAT	(7)	186	2	1366351
190	25.3	22.4	0.0	chr15	84654841	84654923	(17336266)	C	MIR1_Amn	SINE/MIR	(68)	162	56	1366352
242	25.4	6.3	0.0	chr15	84654921	84654979	(17336210)	+	L2b	LINE/L2	3310	3372	(3)	1366353
475	30.9	13.4	1.4	chr15	84804468	84804677	(17186512)	+	MIRc	SINE/MIR	17	255	(13)	1366687
1928	14.8	0.0	0.7	chr15	84960229	84960557	(17030632)	C	AluSz	SINE/Alu	(0)	312	1	1367011
2261	28.6	6.1	4.3	chr15	84960558	84960748	(17030441)	C	HAL1	LINE/L1	(2011)	496	275	1367000
385	32.3	4.7	8.5	chr15	84960760	84960935	(17030254)	C	HAL1	LINE/L1	(2333)	174	6	1367000
749	25.6	12.2	5.9	chr15	85298813	85299228	(16691961)	C	LTR33	LTR/ERVL	(51)	464	3	1367559
407	23.3	15.4	3.6	chr15	88468085	88468249	(13522940)	+	MIRb	SINE/MIR	31	218	(44)	1372453
232	26.0	0.0	2.0	chr15	88468217	88468267	(13522922)	+	L2b	LINE/L2	3326	3375	(0)	1372451
570	31.1	7.9	7.2	chr15	88468515	88468727	(13522462)	C	L2c	LINE/L2	(3)	3384	3178	1372454
2312	17.9	8.1	1.4	chr15	88504495	88504992	(13486197)	+	MER74A	LTR/ERVL	1	534	(24)	1372514
16142	10.8	5.2	0.5	chr15	88541520	88543840	(13447349)	+	HERVS71-int	LTR/ERV1	1952	5667	(3311)	1372566
700	26.6	8.5	3.5	chr15	89003869	89004060	(12987129)	+	MLT1I	LTR/ERVL-MaLR	174	372	(39)	1373432
306	22.2	16.8	0.0	chr15	89004065	89004163	(12987026)	+	MLT2C1	LTR/ERVL	396	514	(49)	1373435
1183	19.6	1.6	8.4	chr15	89112031	89112392	(12878797)	C	MER102c	DNA/hAT-Charlie	(0)	331	1	1373667
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
12	21.8	0.0	4.9	chr15	89370202	89370242	(12620947)	+	(CTCC)n	Simple_repeat	1	41	(0)	1374103
608	16.2	2.2	4.9	chr15	89403879	89404021	(12587168)	C	MIR	SINE/MIR	(123)	139	1	1374149
21	16.6	0.0	0.0	chr15	89417149	89417189	(12574000)	+	(GTAT)n	Simple_repeat	1	41	(0)	1374165
20	5.4	4.7	4.4	chr15	89999907	89999953	(11991236)	+	(GGAAG)n	Simple_repeat	1	47	(0)	1375383
30	17.3	4.6	0.0	chr15	90001395	90001459	(11989730)	+	GA-rich	Low_complexity	1	68	(0)	1375387
19	20.4	3.5	1.7	chr15	90001459	90001516	(11989673)	+	(GCGG)n	Simple_repeat	1	60	(0)	1375388
27	16.9	1.2	7.1	chr15	90001460	90001478	(11989711)	+	G-rich	Low_complexity	1	85	(0)	1375389
19	21.7	4.6	8.0	chr15	90001553	90001632	(11989557)	+	(CCCGG)n	Simple_repeat	1	113	(24)	1375390
21	3.2	0.0	5.6	chr15	90001633	90001668	(11989521)	+	(CCCCAG)n	Simple_repeat	1	36	(0)	1375391
2154	10.1	0.0	0.0	chr15	90175000	90175276	(11815913)	C	AluSc	SINE/Alu	(32)	277	1	1375817
15	27.4	0.0	0.0	chr15	90175414	90175461	(11815728)	+	G-rich	Low_complexity	1	48	(0)	1375818
363	29.9	0.0	3.6	chr15	90175566	90175676	(11815513)	C	L2a	LINE/L2	(5)	3421	3315	1375819
13	13.2	0.0	0.0	chr15	90609805	90609829	(11381360)	+	(AGAA)n	Simple_repeat	1	25	(0)	1376720
556	22.5	0.0	16.6	chr15	90870295	90870475	(11120714)	+	MIR	SINE/MIR	102	252	(10)	1377284
523	31.8	4.0	7.7	chr15	90870700	90870958	(11120231)	+	MIRb	SINE/MIR	3	251	(17)	1377285
13	18.8	4.5	2.2	chr15	90884643	90884686	(11106503)	+	G-rich	Low_complexity	1	46	(0)	1377298
274	31.9	6.2	0.0	chr15	92107898	92107988	(9883201)	C	MIRc	SINE/MIR	(49)	219	123	1379384
298	26.4	1.1	6.2	chr15	92655988	92656084	(9335105)	C	MIRb	SINE/MIR	(41)	227	136	1380170
63	24.8	1.3	2.9	chr15	92667958	92668126	(9323063)	+	GA-rich	Low_complexity	1	166	(0)	1380195
631	15.8	0.0	0.0	chr15	92716127	92716227	(9274962)	+	FRAM	SINE/Alu	67	167	(9)	1380278
26	9.1	0.0	0.0	chr15	92716247	92716282	(9274907)	+	(A)n	Simple_repeat	1	36	(0)	1380279
17	9.1	0.0	0.0	chr15	92917781	92917804	(9073385)	+	(AC)n	Simple_repeat	1	24	(0)	1380744
454	28.3	8.8	3.3	chr15	96286924	96287168	(5704021)	C	MIRc	SINE/MIR	(3)	265	6	1385673
17	19.2	2.8	0.0	chr15	96333472	96333507	(5657682)	+	(CT)n	Simple_repeat	1	37	(0)	1385736
3080	7.2	9.8	7.7	chr15	96984066	96984724	(5006465)	C	LTR12C	LTR/ERV1	(903)	676	3	1386629
14	15.7	2.6	2.6	chr15	97808359	97808396	(4182793)	+	GA-rich	Low_complexity	1	39	(0)	1387688
851	14.1	0.0	0.0	chr15	97808598	97808718	(4182471)	+	FLAM_C	SINE/Alu	10	130	(13)	1387689
18	4.7	0.0	0.0	chr15	98416343	98416364	(3574825)	+	(CA)n	Simple_repeat	1	22	(0)	1388605
3483	16.9	8.3	5.1	chr15	98435019	98435334	(3555855)	+	L1MB7	LINE/L1	5165	5488	(696)	1388640
2382	7.8	0.7	0.3	chr15	98435335	98435627	(3555562)	+	AluSq10	SINE/Alu	3	296	(17)	1388643
18	12.8	2.1	6.1	chr15	98600361	98600417	(3390772)	+	(CCT)n	Simple_repeat	1	54	(0)	1388911
33	9.4	0.0	0.0	chr15	98600424	98600469	(3390720)	+	(AC)n	Simple_repeat	1	46	(0)	1388912
2334	9.6	0.0	0.7	chr15	98881322	98881622	(3109567)	C	AluSx1	SINE/Alu	(13)	299	1	1389282
289	35.7	10.4	2.9	chr15	98881703	98881907	(3109282)	+	MIRb	SINE/MIR	43	264	(4)	1389283
13	15.4	5.6	0.0	chr15	99105697	99105732	(2885457)	+	(CCGCCG)n	Simple_repeat	1	38	(0)	1389634
323	22.1	15.0	0.9	chr15	101152829	101152942	(838247)	+	MER94	DNA/hAT-Blackjack	2	134	(0)	1392407
891	28.8	6.8	4.8	chr15	101152943	101153355	(837834)	+	MLT1J1	LTR/ERVL-MaLR	23	444	(0)	1392408
258	26.2	14.9	1.6	chr15	101158439	101158566	(832623)	+	MIRb	SINE/MIR	104	251	(17)	1392418
23	7.1	6.5	2.0	chr15	101277420	101277465	(713724)	+	(CCG)n	Simple_repeat	1	49	(0)	1392581
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
13	17.6	4.0	5.8	chr16	275600	275649	(90062696)	+	(GCG)n	Simple_repeat	1	52	(0)	1394509
17	16.9	0.0	4.5	chr16	275632	275675	(90062670)	+	(GGCCG)n	Simple_repeat	1	44	(0)	1394510
2416	11.5	13.5	2.6	chr16	278988	279415	(90058930)	+	MER51E	LTR/ERV1	1	482	(0)	1394518
348	30.0	10.8	2.8	chr16	383571	383824	(89954521)	+	L1ME4b	LINE/L1	572	848	(44)	1394654
12	18.3	5.4	0.0	chr16	384109	384145	(89954200)	+	(GCACCCA)n	Simple_repeat	1	39	(0)	1394655
2347	6.2	1.0	0.3	chr16	413186	413477	(89924868)	C	AluSq	SINE/Alu	(19)	294	1	1394715
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
200	20.8	13.2	0.0	chr16	675308	675379	(89662966)	C	L2b	LINE/L2	(166)	3209	3127	1395068
237	6.1	0.0	0.0	chr16	675348	675380	(89662965)	C	L2c	LINE/L2	(226)	3161	3129	1395069
45	18.1	1.8	3.5	chr16	695289	695402	(89642943)	+	(CCCGC)n	Simple_repeat	1	116	(0)	1395085
184	29.2	1.5	0.0	chr16	741340	741404	(89596941)	+	L2b	LINE/L2	3294	3359	(16)	1395135
2572	5.6	0.0	0.0	chr16	741569	741870	(89596475)	C	AluY	SINE/Alu	(9)	302	1	1395136
2063	12.2	1.0	1.3	chr16	745619	745727	(89592618)	C	AluSq	SINE/Alu	(203)	110	1	1395146
12	24.4	2.2	2.2	chr16	745853	745897	(89592448)	+	G-rich	Low_complexity	1	46	(0)	1395148
2299	10.0	0.0	0.3	chr16	1303166	1303464	(89034881)	C	AluSx1	SINE/Alu	(14)	298	1	1395723
223	18.8	0.0	2.0	chr16	1332551	1332599	(89005746)	+	MER5A	DNA/hAT-Charlie	7	54	(135)	1395756
1381	16.3	5.4	7.3	chr16	1332615	1332915	(89005430)	+	AluJo	SINE/Alu	6	300	(12)	1395757
313	25.5	9.3	3.9	chr16	1351177	1351278	(88987067)	C	L2b	LINE/L2	(1)	3374	3267	1395771
12	18.6	6.7	2.1	chr16	1474877	1474921	(88863424)	+	(CCG)n	Simple_repeat	1	48	(0)	1395967
2223	8.6	0.0	1.4	chr16	1679774	1680065	(88658280)	+	AluYm1	SINE/Alu	1	288	(23)	1396241
35	23.7	3.6	3.5	chr16	1763788	1763924	(88574421)	+	G-rich	Low_complexity	1	142	(0)	1396368
417	25.7	11.4	2.1	chr16	2127690	2127832	(88210513)	C	MIRb	SINE/MIR	(89)	179	22	1396911
20	0.0	0.0	0.0	chr16	2149304	2149325	(88189020)	+	(T)n	Simple_repeat	1	22	(0)	1396961
235	17.4	9.2	1.4	chr16	2215546	2215615	(88122730)	C	L1ME3	LINE/L1	(3)	6159	6084	1397045
2133	5.5	0.7	10.9	chr16	2269110	2269439	(88068906)	C	AluSx3	SINE/Alu	(15)	296	1	1397132
12	19.3	0.0	3.0	chr16	2269665	2269697	(88068648)	+	(GGAT)n	Simple_repeat	1	33	(0)	1397133
270	27.5	2.8	0.0	chr16	2490206	2490274	(87848071)	+	LTR78B	LTR/ERV1	8	78	(1218)	1397511
817	10.7	9.0	0.0	chr16	2537376	2537506	(87800839)	C	AluSp	SINE/Alu	(169)	144	1	1397594
269	28.9	4.5	0.0	chr16	2537592	2537730	(87800615)	+	MIR3	SINE/MIR	23	169	(99)	1397595
19	7.3	0.0	0.0	chr16	2537731	2537759	(87800586)	+	(CCGCC)n	Simple_repeat	1	29	(0)	1397596
22	14.9	2.2	0.0	chr16	2721287	2721331	(87617014)	+	G-rich	Low_complexity	1	46	(0)	1397806
17	17.8	4.2	6.7	chr16	2721447	2721518	(87616827)	+	(CTCCGC)n	Simple_repeat	1	75	(0)	1397807
11	24.0	2.6	0.0	chr16	2842397	2842435	(87495910)	+	(CCAGAG)n	Simple_repeat	1	40	(0)	1398009
726	18.2	4.1	0.0	chr16	2906176	2906324	(87432021)	+	FLAM_C	SINE/Alu	11	297	(5)	1398148
16	4.5	0.0	0.0	chr16	2969361	2969383	(87368962)	+	(GCC)n	Simple_repeat	1	23	(0)	1398274
307	24.8	3.5	9.2	chr16	3131837	3131956	(87206389)	+	LTR41C	LTR/ERVL	56	168	(533)	1398564
205	31.3	2.0	5.7	chr16	3132017	3132121	(87206224)	+	MIRb	SINE/MIR	53	153	(115)	1398565
231	26.4	13.8	1.2	chr16	3132136	3132300	(87206045)	+	LTR50	LTR/ERVL	569	757	(38)	1398566
1487	17.6	0.0	1.2	chr16	3156951	3157195	(87181150)	C	AluJb	SINE/Alu	(10)	302	61	1398613
654	1.4	0.0	0.0	chr16	3157405	3157477	(87180868)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	1398614
436	8.0	0.0	23.5	chr16	3160385	3160482	(87177863)	+	tRNA-Pro-CCY	tRNA	1	75	(0)	1398622
2181	6.8	3.5	0.4	chr16	3163134	3163411	(87174934)	C	AluSx	SINE/Alu	(22)	290	4	1398632
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
207	26.8	9.2	3.8	chr16	3485136	3485293	(86853052)	C	MIR3	SINE/MIR	(12)	196	19	1399258
674	26.6	5.5	2.5	chr16	3653007	3653393	(86684952)	+	MLT1C	LTR/ERVL-MaLR	27	466	(1)	1399570
534	22.4	17.3	0.0	chr16	3653426	3653526	(86684819)	+	AluJo	SINE/Alu	1	127	(185)	1399571
1826	17.6	0.3	0.3	chr16	4232517	4232811	(86105534)	C	AluJb	SINE/Alu	(17)	295	1	1400719
1856	17.0	0.7	1.3	chr16	4258416	4258715	(86079630)	C	AluJo	SINE/Alu	(14)	298	1	1400776
1713	17.2	1.9	1.9	chr16	4585175	4585482	(85752863)	+	AluJb	SINE/Alu	1	308	(4)	1401471
338	21.7	1.4	1.4	chr16	4585564	4585633	(85752712)	+	MIR	SINE/MIR	14	83	(179)	1401472
346	20.0	14.8	0.0	chr16	4585674	4585788	(85752557)	C	MLT1J	LTR/ERVL-MaLR	(78)	389	255	1401473
616	20.5	2.3	9.5	chr16	4718808	4719039	(85619306)	+	L1MC4	LINE/L1	7760	7974	(68)	1401709
757	22.6	3.7	0.0	chr16	4988401	4988581	(85349764)	C	MER53	DNA/hAT	(5)	188	1	1402314
275	30.9	16.1	0.0	chr16	8588822	8589009	(81749336)	+	L2c	LINE/L2	3159	3382	(5)	1409356
1658	14.4	6.0	1.1	chr16	9050006	9050289	(81288056)	C	AluJr	SINE/Alu	(12)	300	2	1410451
387	24.9	11.8	5.4	chr16	9097808	9098028	(81240317)	C	MLT1L	LTR/ERVL-MaLR	(364)	246	10	1410584
2040	10.6	0.7	1.1	chr16	9098050	9098331	(81240014)	+	AluSp	SINE/Alu	1	281	(32)	1410585
934	14.0	0.7	3.9	chr16	9680756	9680911	(80657434)	+	MER20	DNA/hAT-Charlie	5	155	(64)	1411869
369	26.4	7.9	0.0	chr16	9680998	9681126	(80657219)	C	MIRb	SINE/MIR	(74)	194	55	1411870
343	31.9	9.7	2.4	chr16	9964261	9964413	(80373932)	+	MIR	SINE/MIR	29	202	(60)	1412408
1827	21.3	6.1	3.3	chr16	9964414	9964903	(80373442)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1412409
343	31.9	9.7	2.4	chr16	9964904	9964958	(80373387)	+	MIR	SINE/MIR	203	254	(8)	1412408
247	28.3	16.1	2.4	chr16	9979153	9979307	(80359038)	+	MIRc	SINE/MIR	22	196	(72)	1412437
407	30.6	10.7	5.2	chr16	9979305	9979725	(80358620)	+	L2c	LINE/L2	2939	3385	(2)	1412438
48	0.0	0.0	0.0	chr16	10183568	10183608	(80154737)	+	(AC)n	Simple_repeat	1	41	(0)	1412845
12	14.9	4.9	4.7	chr16	10580554	10580594	(79757751)	+	(GCTG)n	Simple_repeat	1	43	(0)	1413754
16	5.3	0.0	0.0	chr16	10616516	10616535	(79721810)	+	(A)n	Simple_repeat	1	20	(0)	1413843
51	0.0	0.0	0.0	chr16	10632870	10632913	(79705432)	+	(AC)n	Simple_repeat	1	44	(0)	1413886
2050	9.3	0.7	0.0	chr16	10633090	10633367	(79704978)	+	AluSx1	SINE/Alu	12	291	(21)	1413887
285	32.8	9.8	5.8	chr16	10682924	10683354	(79654991)	C	L2c	LINE/L2	(28)	3359	2910	1414036
627	24.2	9.7	5.5	chr16	10683581	10683600	(79654745)	C	MER113	DNA/hAT-Charlie	(70)	451	423	1414037
2201	11.3	0.0	0.7	chr16	10683601	10683892	(79654453)	C	AluSq2	SINE/Alu	(23)	290	1	1414038
2049	10.4	6.8	0.3	chr16	10926533	10926819	(79411526)	C	AluSq	SINE/Alu	(6)	307	1	1414578
16	21.3	0.0	0.0	chr16	11403404	11403436	(78934909)	+	(CA)n	Simple_repeat	1	33	(0)	1415591
27	2.2	6.0	3.8	chr16	11403450	11403499	(78934846)	+	(CACACATAG)n	Simple_repeat	1	53	(0)	1415592
13	14.8	0.0	3.1	chr16	11915172	11915203	(78423142)	+	(CCCCG)n	Simple_repeat	1	32	(0)	1416782
1819	22.1	14.5	4.6	chr16	12256936	12257496	(78080849)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	2	1417571
1124	28.2	11.2	1.9	chr16	13865969	13866455	(76471890)	C	LTR16E1	LTR/ERVL	(0)	538	1	1421041
1296	24.7	8.0	3.2	chr16	13866456	13866615	(76471730)	+	L1ME3Cz	LINE/L1	825	997	(0)	1421039
12	18.1	0.0	3.0	chr16	14003354	14003386	(76334959)	+	(GCCCCT)n	Simple_repeat	1	33	(0)	1421289
233	24.1	12.2	1.2	chr16	14015551	14015630	(76322715)	+	Charlie4z	DNA/hAT-Charlie	54	143	(24)	1421321
642	30.6	0.5	4.0	chr16	14110372	14110572	(76227773)	+	MIR3	SINE/MIR	9	202	(6)	1421523
325	32.6	2.0	4.0	chr16	14299431	14299580	(76038765)	C	MIRb	SINE/MIR	(38)	230	84	1421810
222	26.2	7.2	7.2	chr16	14299791	14299901	(76038444)	+	L2c	LINE/L2	3263	3373	(2)	1421808
506	34.5	6.0	6.8	chr16	17383203	17383569	(72954776)	+	L2b	LINE/L2	3010	3373	(2)	1428964
18	12.6	0.0	0.0	chr16	17744707	17744733	(72593612)	+	(CA)n	Simple_repeat	1	27	(0)	1429740
12	13.9	6.2	0.0	chr16	17744972	17745003	(72593342)	+	G-rich	Low_complexity	1	34	(0)	1429741
223	27.7	14.4	0.0	chr16	17931871	17931953	(72406392)	+	L2a	LINE/L2	2818	2914	(505)	1430104
12	21.6	0.0	4.9	chr16	17944531	17944571	(72393774)	+	(TTCCA)n	Simple_repeat	1	41	(0)	1430130
2733	14.9	7.5	3.7	chr16	19487759	19488251	(70850094)	C	MER74A	LTR/ERVL	(39)	519	2	1433687
368	30.6	14.1	6.2	chr16	19488469	19488935	(70849410)	+	L2a	LINE/L2	2917	3426	(0)	1433690
577	29.3	9.1	0.0	chr16	19681132	19681370	(70656975)	+	LTR33	LTR/ERVL	34	296	(219)	1434104
37	2.5	2.5	0.0	chr16	19879415	19879454	(70458891)	+	(CA)n	Simple_repeat	1	41	(0)	1434568
365	35.6	12.0	1.9	chr16	19879630	19879838	(70458507)	+	MIR	SINE/MIR	28	260	(2)	1434569
241	13.0	4.2	0.0	chr16	19883407	19883452	(70454893)	C	UCON88	Unknown	(25)	87	40	1434579
257	29.1	9.3	0.8	chr16	20257385	20257512	(70080833)	+	MLT1L	LTR/ERVL-MaLR	106	245	(365)	1435497
7807	14.7	5.1	2.5	chr16	20674609	20676244	(69662101)	+	HERV15-int	LTR/ERV1	1	1385	(7041)	1436286
2662	26.1	0.9	3.2	chr16	20676237	20676920	(69661425)	+	HERV15-int	LTR/ERV1	1704	2371	(6055)	1436286
24	9.5	0.0	0.0	chr16	21300513	21300546	(69037799)	+	(A)n	Simple_repeat	1	34	(0)	1437612
780	13.1	3.0	1.5	chr16	21300547	21300678	(69037667)	+	LTR57	LTR/ERVL	270	403	(8)	1437613
401	11.8	4.2	0.0	chr16	21300682	21300749	(69037596)	C	LTR41B	LTR/ERVL	(581)	177	107	1437614
770	28.9	10.2	1.5	chr16	22224982	22225393	(68112952)	C	L2a	LINE/L2	(158)	3268	2792	1439579
12	29.2	4.8	0.0	chr16	22374339	22374400	(67963945)	+	(CCCTCCG)n	Simple_repeat	1	65	(0)	1439921
12	7.8	7.4	0.0	chr16	22374463	22374489	(67963856)	+	(CCGG)n	Simple_repeat	1	29	(0)	1439922
5092	21.0	5.8	3.8	chr16	22615429	22616987	(67721358)	C	LTR53-int	LTR/ERVL	(2028)	1301	10	1440446
1256	22.4	14.4	1.6	chr16	22616991	22617047	(67721298)	C	LTR52	LTR/ERVL	(4)	417	326	1440446
47	0.0	0.0	0.0	chr16	22617048	22617087	(67721258)	+	(AC)n	Simple_repeat	1	40	(0)	1440451
1256	22.4	14.4	1.6	chr16	22617088	22617392	(67720953)	C	LTR52	LTR/ERVL	(96)	325	2	1440446
198	33.0	2.1	6.9	chr16	23399403	23399503	(66938842)	C	L2b	LINE/L2	(17)	3358	3263	1442190
13	22.1	4.8	4.5	chr16	23680017	23680079	(66658266)	+	(CCCCT)n	Simple_repeat	1	66	(0)	1442843
319	29.6	4.7	9.8	chr16	24059715	24060032	(66278313)	C	L2	LINE/L2	(1263)	2156	1856	1443782
1261	30.6	3.8	0.7	chr16	24117627	24118034	(66220311)	C	LTR16C	LTR/ERVL	(0)	489	69	1443909
820	24.8	5.2	0.5	chr16	24118096	24118314	(66220031)	+	MIR	SINE/MIR	2	231	(31)	1443910
559	31.2	8.3	1.3	chr16	27324420	27324653	(63013692)	C	L2a	LINE/L2	(1)	3425	3174	1450883
703	25.7	2.4	3.9	chr16	27366665	27366920	(62971425)	C	MIRb	SINE/MIR	(0)	268	2	1451001
342	31.6	5.2	2.7	chr16	27431351	27431505	(62906840)	C	MIRb	SINE/MIR	(65)	203	29	1451132
1484	20.9	6.4	7.7	chr16	27431506	27431657	(62906688)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	271	1451133
607	28.2	13.1	2.5	chr16	27804233	27804628	(62533717)	+	L2b	LINE/L2	2931	3374	(1)	1451966
15	25.6	1.4	5.5	chr16	28924715	28924786	(61413559)	+	(GCCCCT)n	Simple_repeat	1	73	(0)	1454762
196	30.8	0.0	3.0	chr16	29251910	29251976	(61086369)	C	MIR3	SINE/MIR	(47)	161	97	1455415
20	31.1	3.9	0.9	chr16	29812107	29812217	(60526128)	+	G-rich	Low_complexity	1	114	(0)	1456616
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
180	32.3	5.8	0.0	chr16	30354644	30354708	(59983637)	C	L3	LINE/CR1	(3795)	304	236	1457839
13	25.3	2.0	2.0	chr16	30585555	30585603	(59752742)	+	G-rich	Low_complexity	1	50	(0)	1458400
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
271	29.9	3.9	5.3	chr16	30728189	30728396	(59609949)	C	L2c	LINE/L2	(1)	3386	3182	1458749
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
26	26.6	3.4	5.2	chr16	30786812	30786959	(59551386)	+	(CCCCCGG)n	Simple_repeat	1	153	(0)	1458841
15	7.3	3.2	3.1	chr16	30787523	30787553	(59550792)	+	(GGGCTG)n	Simple_repeat	1	32	(0)	1458842
193	28.0	3.9	0.0	chr16	30806098	30806172	(59532173)	C	MIR3	SINE/MIR	(106)	102	25	1458896
380	23.9	7.4	6.1	chr16	30813968	30814115	(59524230)	C	MIR3	SINE/MIR	(23)	185	33	1458924
383	26.3	7.1	6.0	chr16	30875870	30876035	(59462310)	C	MIRc	SINE/MIR	(98)	170	3	1459067
731	18.1	0.7	3.2	chr16	30876221	30876374	(59461971)	C	ERVL-B4-int	LTR/ERVL	(3542)	2172	2023	1459068
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
196	26.1	0.0	0.0	chr16	30921896	30921941	(59416404)	C	MIR3	SINE/MIR	(0)	208	163	1459203
333	27.1	7.0	10.7	chr16	30921952	30922100	(59416245)	C	MIRb	SINE/MIR	(30)	238	96	1459204
15	18.7	4.3	4.2	chr16	31142906	31142951	(59195394)	+	(GC)n	Simple_repeat	1	48	(0)	1459691
14	13.9	2.9	2.9	chr16	31202707	31202740	(59135605)	+	(GCC)n	Simple_repeat	1	35	(0)	1459828
367	31.4	4.8	1.9	chr16	31427277	31427438	(58910907)	+	MIRb	SINE/MIR	23	189	(79)	1460292
17	20.8	8.3	4.3	chr16	31477005	31477112	(58861233)	+	G-rich	Low_complexity	1	117	(0)	1460396
204	29.3	10.8	5.2	chr16	46690234	46690424	(43647921)	C	L2b	LINE/L2	(237)	3138	2936	1465821
182	25.9	0.0	0.0	chr16	46898128	46898181	(43440164)	+	MIRc	SINE/MIR	51	104	(164)	1466280
2058	14.7	0.0	2.8	chr16	46898530	46898849	(43439496)	C	AluSz	SINE/Alu	(1)	311	1	1466281
2055	11.9	0.3	2.0	chr16	48490644	48490937	(41847408)	C	AluSz	SINE/Alu	(21)	291	3	1468905
478	20.4	2.3	13.9	chr16	48490938	48491036	(41847309)	C	MIRb	SINE/MIR	(101)	167	73	1468904
2390	18.8	4.8	2.6	chr16	48791783	48792274	(41546071)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	1469424
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
504	29.9	15.0	1.9	chr16	49421093	49421612	(40916733)	C	L2a	LINE/L2	(14)	3412	2816	1470505
196	34.8	0.0	0.0	chr16	49421631	49421699	(40916646)	C	L2a	LINE/L2	(950)	2469	2401	1470505
20	10.4	4.7	2.2	chr16	49857304	49857386	(40480959)	+	(GGC)n	Simple_repeat	1	85	(0)	1471245
2042	18.9	2.4	6.8	chr16	49947781	49948269	(40390076)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1471441
2143	24.2	10.8	0.3	chr16	49948304	49948996	(40389349)	+	L1ME2	LINE/L1	5344	6124	(40)	1471442
491	21.8	5.7	3.5	chr16	50487416	50487586	(39850759)	+	L1ME4a	LINE/L1	5948	6122	(2)	1472594
2326	11.5	4.7	3.3	chr16	50487759	50488117	(39850228)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1472595
294	31.3	8.7	0.0	chr16	50538520	50538634	(39799711)	+	L2b	LINE/L2	3240	3365	(10)	1472701
869	27.9	8.5	2.5	chr16	50538815	50539134	(39799211)	+	MER102b	DNA/hAT-Charlie	1	341	(0)	1472702
36	0.0	0.0	0.0	chr16	50693466	50693499	(39644846)	+	(GCTGCGGG)n	Simple_repeat	1	34	(0)	1473002
12	22.7	0.0	10.1	chr16	50693502	50693570	(39644775)	+	G-rich	Low_complexity	1	69	(0)	1473003
26	6.2	0.0	0.0	chr16	50693580	50693613	(39644732)	+	(CCGGAG)n	Simple_repeat	1	34	(0)	1473004
1933	23.3	12.1	3.9	chr16	51180577	51181144	(39157201)	+	MLT1E3	LTR/ERVL-MaLR	4	624	(0)	1473884
234	29.3	2.6	1.3	chr16	53503989	53504064	(36834281)	+	MER5A	DNA/hAT-Charlie	112	188	(1)	1477954
19	0.0	0.0	0.0	chr16	53504089	53504109	(36834236)	+	(T)n	Simple_repeat	1	21	(0)	1477955
759	20.5	16.6	0.0	chr16	55190509	55190763	(35147582)	+	MER58B	DNA/hAT-Charlie	1	336	(5)	1480942
24	15.1	0.0	0.0	chr16	55328755	55328798	(35009547)	+	GA-rich	Low_complexity	1	44	(0)	1481219
427	25.4	16.0	5.0	chr16	55623587	55623768	(34714577)	+	MIRc	SINE/MIR	9	214	(54)	1481700
17	16.1	0.0	0.0	chr16	56677050	56677084	(33661261)	+	(CTGCAC)n	Simple_repeat	1	35	(0)	1483530
280	21.4	1.4	5.4	chr16	56677247	56677320	(33661025)	C	MIR3	SINE/MIR	(21)	187	117	1483531
229	21.5	9.7	9.1	chr16	56988927	56989052	(33349293)	+	MIRb	SINE/MIR	67	200	(68)	1484119
17	29.4	0.0	3.0	chr16	57284711	57284776	(33053569)	+	(CCG)n	Simple_repeat	1	66	(0)	1484720
1942	20.6	6.1	0.0	chr16	57422281	57422727	(32915618)	+	L1MB5	LINE/L1	5684	6159	(15)	1485042
574	31.9	9.9	2.7	chr16	57762741	57763248	(32575097)	+	L2a	LINE/L2	2871	3425	(1)	1485712
18	17.6	0.0	0.0	chr16	58734013	58734044	(31604301)	+	(GT)n	Simple_repeat	1	32	(0)	1487741
819	23.5	13.1	5.4	chr16	58838308	58838680	(31499665)	+	L1ME3A	LINE/L1	5766	6171	(2)	1487940
311	40.0	6.1	4.4	chr16	61165589	61165975	(29172370)	+	L1MA3	LINE/L1	1324	1717	(5779)	1491422
13	29.1	0.0	2.0	chr16	65728448	65728545	(24609800)	+	(TAGGAAC)n	Simple_repeat	1	96	(0)	1498416
649	0.0	0.0	0.0	chr16	65728607	65728677	(24609668)	+	L1PA4	LINE/L1	6067	6137	(18)	1498417
403	33.8	7.8	3.8	chr16	66212128	66212518	(24125827)	+	L1M5	LINE/L1	4382	4789	(1357)	1499296
529	23.8	8.2	5.0	chr16	66407219	66407417	(23930928)	+	L1ME4a	LINE/L1	5624	5829	(295)	1499673
334	27.2	1.8	1.9	chr16	66419556	66419666	(23918679)	C	MIRc	SINE/MIR	(136)	132	24	1499701
256	20.3	8.0	0.0	chr16	66428439	66428507	(23909838)	+	MIR3	SINE/MIR	75	149	(59)	1499719
267	30.0	4.2	0.0	chr16	66519912	66520001	(23818344)	+	LTR88a	LTR/Gypsy?	298	391	(425)	1499886
233	21.9	17.6	0.0	chr16	66552063	66552149	(23786196)	C	L2a	LINE/L2	(28)	3398	3263	1499951
32	32.4	1.4	2.7	chr16	66604020	66604163	(23734182)	+	(TG)n	Simple_repeat	1	146	(0)	1500045
209	10.3	0.0	0.0	chr16	66604439	66604467	(23733878)	C	L2	LINE/L2	(1505)	1914	1886	1500046
33	2.9	0.0	0.0	chr16	67164552	67164587	(23173758)	+	(CACCC)n	Simple_repeat	1	36	(0)	1501204
251	30.8	7.1	0.0	chr16	67185693	67185770	(23152575)	+	MIR3	SINE/MIR	64	147	(61)	1501229
49	3.9	0.0	0.0	chr16	67416368	67416420	(22921925)	+	(GCTCCG)n	Simple_repeat	1	53	(0)	1501597
18	14.8	7.4	1.7	chr16	67652857	67652910	(22685435)	+	(GCG)n	Simple_repeat	1	58	(0)	1502110
13	26.3	1.6	4.6	chr16	67661134	67661197	(22677148)	+	(TCCCTCT)n	Simple_repeat	1	65	(0)	1502114
80	4.8	0.0	0.0	chr16	67842863	67842950	(22495395)	+	(GCA)n	Simple_repeat	1	88	(0)	1502468
12	8.1	3.6	3.5	chr16	68245583	68245610	(22092735)	+	G-rich	Low_complexity	1	29	(0)	1503223
964	22.2	3.2	12.1	chr16	68328497	68328622	(22009723)	+	MER44A	DNA/TcMar-Tigger	229	338	(1)	1503379
269	20.4	16.2	7.5	chr16	68644274	68644379	(21693966)	C	MamRep488	DNA/hAT-Tip100	(100)	119	3	1503978
1781	9.6	5.6	8.0	chr16	68644447	68644758	(21693587)	+	AluJb	SINE/Alu	3	306	(6)	1503979
374	30.1	8.1	11.3	chr16	69524299	69524669	(20813676)	+	MLT1K	LTR/ERVL-MaLR	221	578	(17)	1505993
249	24.0	5.5	11.1	chr16	70065182	70065298	(20273047)	+	MER5A1	DNA/hAT-Charlie	57	166	(0)	1507160
347	23.9	3.6	11.0	chr16	70604375	70604546	(19733799)	C	MIRb	SINE/MIR	(60)	170	10	1508356
17	13.1	0.0	0.0	chr16	71626455	71626480	(18711865)	+	(GA)n	Simple_repeat	1	26	(0)	1510047
16	0.0	0.0	4.2	chr16	73071405	73071428	(17266917)	+	(GAGG)n	Simple_repeat	1	24	(0)	1512355
25	20.3	0.0	0.0	chr16	73071457	73071509	(17266836)	+	(CTG)n	Simple_repeat	1	53	(0)	1512356
37	0.0	0.0	0.0	chr16	73265079	73265110	(17073235)	+	(GT)n	Simple_repeat	1	32	(0)	1512725
810	12.4	0.4	0.1	chr16	73265111	73265232	(17073113)	C	L1P5	LINE/L1	(388)	5786	5659	1512726
11	14.8	4.9	4.7	chr16	74813188	74813228	(15525117)	+	G-rich	Low_complexity	1	43	(0)	1515494
3599	16.1	2.2	2.5	chr16	75130301	75130775	(15207570)	C	MER50	LTR/ERV1	(249)	485	1	1516145
232	29.1	8.8	2.8	chr16	75149147	75149252	(15189093)	C	MIRc	SINE/MIR	(72)	196	84	1516199
1452	29.0	4.5	2.1	chr16	75197695	75197951	(15140394)	C	HERV16-int	LTR/ERVL	(4732)	264	5	1516292
748	26.9	18.6	4.7	chr16	75197958	75198339	(15140006)	C	LTR16A	LTR/ERVL	(2)	449	3	1516292
1819	9.9	12.3	0.0	chr16	75255446	75255708	(15082637)	+	AluSx1	SINE/Alu	1	300	(12)	1516391
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
2194	11.2	0.0	1.1	chr16	77240364	77240688	(13097657)	+	AluSz	SINE/Alu	1	312	(0)	1519509
301	31.4	10.2	5.4	chr16	77240689	77240732	(13097613)	+	MIR	SINE/MIR	151	187	(75)	1519508
2062	16.7	0.0	0.3	chr16	77240912	77241222	(13097123)	+	AluJb	SINE/Alu	1	310	(2)	1519510
265	21.4	10.4	7.2	chr16	77592029	77592139	(12746206)	C	L2a	LINE/L2	(8)	3418	3304	1520110
322	24.1	11.9	1.9	chr16	77592129	77592288	(12746057)	C	MIRc	SINE/MIR	(70)	198	20	1520111
637	27.2	14.3	6.2	chr16	77592428	77592549	(12745796)	C	Charlie8	DNA/hAT-Charlie	(1962)	466	351	1520112
13	8.8	0.0	3.9	chr16	77788753	77788778	(12549567)	+	(CGG)n	Simple_repeat	1	26	(0)	1520488
202	26.2	4.7	0.0	chr16	77852636	77852696	(12485649)	+	MIRb	SINE/MIR	177	240	(28)	1520610
747	30.0	3.3	0.4	chr16	77852761	77852994	(12485351)	+	MIR	SINE/MIR	1	241	(21)	1520611
2005	14.5	0.0	2.0	chr16	77974572	77974868	(12363477)	C	AluSz	SINE/Alu	(21)	291	1	1520872
37	0.0	0.0	0.0	chr16	77975195	77975228	(12363117)	+	(T)n	Simple_repeat	1	34	(0)	1520873
5500	7.9	2.7	2.2	chr16	77991591	77991614	(12346731)	C	MER4E1	LTR/ERV1	(0)	781	762	1520905
3146	14.7	2.9	3.1	chr16	77991615	77992161	(12346184)	+	LTR10B1	LTR/ERV1	1	546	(1)	1520906
283	30.7	4.4	1.3	chr16	80028851	80029005	(10309340)	C	MIR	SINE/MIR	(24)	238	79	1524606
666	30.9	3.4	3.0	chr16	80161589	80161852	(10176493)	C	MER102c	DNA/hAT-Charlie	(0)	331	67	1524827
247	30.0	8.3	3.6	chr16	80161927	80162086	(10176259)	C	MIRc	SINE/MIR	(42)	166	6	1524828
524	27.1	5.3	12.8	chr16	81180643	81180866	(9157479)	C	LTR16A2	LTR/ERVL	(64)	431	215	1526689
229	28.2	18.9	4.7	chr16	81482738	81482908	(8855437)	+	MIRb	SINE/MIR	29	229	(39)	1527366
962	28.8	5.6	5.3	chr16	81482914	81483478	(8854867)	C	L2a	LINE/L2	(2)	3424	2858	1527367
1437	24.4	4.8	6.3	chr16	81530999	81531458	(8806887)	+	MLT1C	LTR/ERVL-MaLR	1	453	(14)	1527466
491	24.2	9.6	0.0	chr16	81641043	81641174	(8697171)	+	MER5A1	DNA/hAT-Charlie	1	146	(20)	1527689
191	32.9	0.0	3.8	chr16	81641340	81641418	(8696927)	C	L2b	LINE/L2	(67)	3308	3233	1527690
3470	13.5	9.2	6.7	chr16	81889954	81890480	(8447865)	C	LTR8A	LTR/ERV1	(143)	584	1	1528278
16	8.2	0.0	0.0	chr16	82170264	82170289	(8168056)	+	(CGCCC)n	Simple_repeat	1	26	(0)	1528775
340	19.4	0.0	0.0	chr16	83837585	83837656	(6500689)	+	MIR	SINE/MIR	164	235	(27)	1531690
184	15.0	0.0	11.1	chr16	83837633	83837677	(6500668)	+	L2a	LINE/L2	3370	3409	(17)	1531691
214	33.9	0.0	0.0	chr16	83837702	83837757	(6500588)	+	L2b	LINE/L2	3252	3307	(68)	1531692
356	19.8	0.0	9.4	chr16	83837761	83837866	(6500479)	+	MLT1H2	LTR/ERVL-MaLR	15	110	(439)	1531693
443	25.1	13.6	8.1	chr16	83837899	83838155	(6500190)	+	MLT1H2	LTR/ERVL-MaLR	256	546	(2)	1531693
1549	16.6	4.5	0.0	chr16	83841448	83841556	(6496789)	C	AluJr	SINE/Alu	(190)	122	14	1531701
1369	16.1	0.4	1.4	chr16	83841557	83841803	(6496542)	C	MER4D1	LTR/ERV1	(376)	234	8	1531700
2130	10.5	3.6	2.9	chr16	83841848	83842153	(6496192)	+	AluSz	SINE/Alu	1	308	(4)	1531703
4531	11.7	6.8	3.7	chr16	83888342	83888411	(6449934)	C	LTR19C	LTR/ERV1	(1)	778	709	1531790
50	0.0	0.0	0.0	chr16	83888412	83888454	(6449891)	+	(AC)n	Simple_repeat	1	43	(0)	1531791
4531	11.7	6.8	3.7	chr16	83888455	83889027	(6449318)	C	LTR19C	LTR/ERV1	(71)	708	111	1531790
425	25.5	2.9	0.0	chr16	83957073	83957174	(6381171)	C	MIR	SINE/MIR	(50)	212	108	1531925
326	31.9	9.1	2.7	chr16	84296678	84296931	(6041414)	C	L2c	LINE/L2	(160)	3215	2955	1532538
410	24.1	6.8	0.7	chr16	84329955	84330144	(6008201)	C	LTR16A2	LTR/ERVL	(0)	495	285	1532611
293	31.4	0.7	2.3	chr16	84330689	84330809	(6007536)	C	MIRb	SINE/MIR	(119)	149	22	1532613
222	28.1	4.2	0.0	chr16	84370959	84371036	(5967309)	C	L2b	LINE/L2	(1)	3386	3287	1532703
1698	17.2	4.0	0.0	chr16	84371236	84371525	(5966820)	+	AluJb	SINE/Alu	2	303	(9)	1532704
230	28.8	2.9	0.0	chr16	84576600	84576665	(5761680)	+	MIR3	SINE/MIR	112	179	(29)	1533118
276	31.6	8.6	0.9	chr16	84633647	84633860	(5704485)	C	LTR33	LTR/ERVL	(6)	509	278	1533255
1536	21.9	3.8	1.6	chr16	84633866	84634231	(5704114)	+	MER31B	LTR/ERV1	17	390	(76)	1533256
255	28.6	9.9	0.0	chr16	84819282	84819372	(5518973)	+	MIRb	SINE/MIR	84	184	(84)	1533635
636	31.3	6.0	5.5	chr16	85205867	85206245	(5132100)	C	L2c	LINE/L2	(1)	3386	3006	1534387
795	20.3	2.6	0.5	chr16	85417167	85417354	(4920991)	C	MER20	DNA/hAT-Charlie	(18)	201	10	1534791
420	26.9	12.8	3.5	chr16	85437795	85438010	(4900335)	+	MIR	SINE/MIR	29	268	(0)	1534841
346	36.5	6.5	2.4	chr16	85717648	85717852	(4620493)	C	MIRb	SINE/MIR	(37)	231	18	1535289
1319	17.8	11.8	1.9	chr16	85718107	85718365	(4619980)	C	AluJb	SINE/Alu	(24)	288	1	1535290
881	16.2	0.7	0.0	chr16	85893116	85893257	(4445088)	+	AluJr	SINE/Alu	152	294	(18)	1535630
1104	20.3	2.8	7.6	chr16	85893261	85893510	(4444835)	+	MLT1D	LTR/ERVL-MaLR	216	444	(61)	1535629
2570	6.1	0.0	0.6	chr16	85893511	85893822	(4444523)	+	AluY	SINE/Alu	1	310	(1)	1535631
409	34.6	0.5	0.5	chr16	86349486	86349671	(3988674)	+	L2b	LINE/L2	2998	3183	(192)	1536491
301	13.5	0.0	5.5	chr16	86349742	86349796	(3988549)	C	MER5A	DNA/hAT-Charlie	(137)	52	1	1536489
1372	22.4	6.5	3.0	chr16	87318692	87319164	(3019181)	+	L1ME3	LINE/L1	5453	5960	(213)	1538234
413	34.4	3.0	1.0	chr16	87319212	87319405	(3018940)	+	MIR	SINE/MIR	31	228	(34)	1538235
1170	16.9	14.7	0.0	chr16	87384639	87384881	(2953464)	+	AluJr	SINE/Alu	20	304	(8)	1538341
26	21.1	1.5	1.5	chr16	87392347	87392413	(2945932)	+	(CGC)n	Simple_repeat	1	68	(0)	1538356
526	27.6	3.2	1.1	chr16	87493366	87493548	(2844797)	+	MIRb	SINE/MIR	2	188	(80)	1538509
1532	27.4	8.0	2.7	chr16	87526517	87527075	(2811270)	C	MER20B	DNA/hAT-Charlie	(26)	757	167	1538588
233	21.6	3.8	0.0	chr16	87527078	87527128	(2811217)	C	MER20B	DNA/hAT-Charlie	(730)	53	1	1538588
750	24.2	1.0	5.3	chr16	87527416	87527624	(2810721)	+	MIRb	SINE/MIR	17	216	(52)	1538589
15	5.6	0.0	0.0	chr16	87540717	87540735	(2797610)	+	(A)n	Simple_repeat	1	19	(0)	1538621
1581	17.0	8.8	0.8	chr16	88554291	88554675	(1783670)	C	MLT1D	LTR/ERVL-MaLR	(10)	495	77	1540103
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
297	37.4	0.0	1.5	chr16	88611131	88611263	(1727082)	C	L1PA17	LINE/L1	(16)	6150	6020	1540215
71	20.0	5.3	2.5	chr16	88611272	88611498	(1726847)	+	G-rich	Low_complexity	1	239	(0)	1540216
18	10.5	0.0	0.0	chr16	88611477	88611507	(1726838)	+	(GGAGAA)n	Simple_repeat	1	31	(0)	1540217
335	32.1	7.3	1.8	chr16	88611732	88611950	(1726395)	+	MER46C	DNA/TcMar-Tigger	89	320	(18)	1540218
314	28.9	8.2	3.0	chr16	88910025	88910470	(1427875)	+	L2a	LINE/L2	2892	3419	(7)	1540586
16	17.7	0.0	2.5	chr16	89200524	89200563	(1137782)	+	G-rich	Low_complexity	1	40	(0)	1540896
243	29.4	8.9	3.5	chr16	89289286	89289486	(1048859)	+	Tigger13a	DNA/TcMar-Tigger	361	573	(198)	1541048
655	20.8	1.5	0.0	chr16	89444666	89444795	(893550)	+	AluJo	SINE/Alu	3	134	(178)	1541265
1577	16.8	9.3	0.4	chr16	89642848	89643121	(695224)	C	AluJo	SINE/Alu	(11)	301	1	1541595
667	21.6	1.3	0.7	chr16	89643123	89643276	(695069)	+	L1MC4	LINE/L1	6773	6927	(1115)	1541596
2427	7.5	0.0	0.0	chr16	89849842	89850135	(488210)	C	AluSg	SINE/Alu	(16)	294	1	1541971
13	9.8	0.0	0.0	chr16	89850472	89850493	(487852)	+	(GAG)n	Simple_repeat	1	22	(0)	1541972
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
2005	12.5	1.4	0.7	chr16	90041947	90042235	(296110)	C	AluSz	SINE/Alu	(21)	291	1	1542278
1884	15.1	0.0	2.4	chr17	205577	205868	(83051573)	C	AluJo	SINE/Alu	(27)	285	1	1544792
355	9.0	0.8	0.0	chr17	348037	348094	(82909347)	+	MER66B	LTR/ERV1	295	357	(127)	1545023
1522	22.2	7.7	1.4	chr17	348119	348543	(82908898)	+	L1MC2	LINE/L1	5871	6324	(20)	1545018
12	15.4	3.9	7.5	chr17	384798	384848	(82872593)	+	(GAGGTG)n	Simple_repeat	1	53	(0)	1545094
13	18.0	4.5	7.2	chr17	384936	385001	(82872440)	+	(GGAGATG)n	Simple_repeat	1	69	(0)	1545095
15	22.2	0.0	9.3	chr17	384982	385056	(82872385)	+	G-rich	Low_complexity	1	75	(0)	1545096
268	35.0	3.9	4.7	chr17	489418	489546	(82767895)	C	L2c	LINE/L2	(159)	3228	3101	1545252
15	11.6	4.9	4.7	chr17	523152	523192	(82734249)	+	(CTG)n	Simple_repeat	1	43	(0)	1545306
12	0.0	3.7	7.1	chr17	732934	732960	(82524481)	+	(GGCGG)n	Simple_repeat	1	28	(0)	1545708
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
283	27.0	15.3	0.0	chr17	900337	900447	(82356994)	C	MIR	SINE/MIR	(120)	142	12	1545996
50	24.0	0.6	4.8	chr17	1179471	1179636	(82077805)	+	(TCCCGA)n	Simple_repeat	1	167	(0)	1546511
271	26.6	3.0	0.0	chr17	1569268	1569331	(81688110)	C	L2a	LINE/L2	(2)	3424	3359	1547378
1948	17.1	0.0	1.3	chr17	1572891	1573199	(81684242)	+	AluJo	SINE/Alu	1	305	(7)	1547385
276	27.9	7.8	3.8	chr17	1573432	1573591	(81683850)	C	MER103C	DNA/hAT-Charlie	(104)	193	27	1547386
1394	16.9	14.8	0.8	chr17	1589323	1589583	(81667858)	+	AluJo	SINE/Alu	1	304	(8)	1547414
425	23.3	10.8	0.0	chr17	1976504	1976619	(81280822)	+	MIRb	SINE/MIR	57	186	(82)	1548208
578	28.4	12.3	0.3	chr17	1976766	1976983	(81280458)	+	MIRb	SINE/MIR	1	247	(21)	1548209
2301	9.0	0.0	3.1	chr17	2725091	2725411	(80532030)	+	AluSx1	SINE/Alu	1	311	(1)	1549783
22	25.0	2.2	4.3	chr17	2749665	2749756	(80507685)	+	GA-rich	Low_complexity	1	94	(0)	1549847
341	25.9	10.1	3.0	chr17	2750082	2750266	(80507175)	+	MIR3	SINE/MIR	33	238	(30)	1549848
2211	8.6	1.3	1.3	chr17	2750270	2750572	(80506869)	+	AluSx1	SINE/Alu	1	303	(9)	1549849
953	23.9	11.5	6.7	chr17	2875367	2875676	(80381765)	C	LTR56	LTR/ERV1	(110)	335	2	1550152
250	35.0	0.0	1.9	chr17	2875805	2875909	(80381532)	+	L2b	LINE/L2	2409	2511	(908)	1550154
2499	8.1	0.0	0.0	chr17	2875926	2876235	(80381206)	C	AluY	SINE/Alu	(0)	311	2	1550155
2795	16.0	1.7	6.9	chr17	2876278	2876882	(80380559)	C	MER4B	LTR/ERV1	(36)	574	2	1550156
2474	7.5	0.7	0.0	chr17	2876884	2877188	(80380253)	C	AluSp	SINE/Alu	(6)	307	1	1550157
763	26.4	4.8	4.0	chr17	3049536	3049784	(80207657)	C	ORSL-2a	DNA/hAT-Tip100	(84)	258	8	1550499
244	22.6	20.5	0.9	chr17	3945412	3945533	(79311908)	+	MIRc	SINE/MIR	4	152	(78)	1552051
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
14	21.1	0.0	2.5	chr17	4366693	4366753	(78890688)	+	(CCCG)n	Simple_repeat	1	59	(0)	1552867
50	0.0	0.0	0.0	chr17	4413486	4413530	(78843911)	+	(TGCT)n	Simple_repeat	1	45	(0)	1553013
45	24.2	1.8	0.0	chr17	4413533	4413689	(78843752)	+	(TCTC)n	Simple_repeat	1	159	(0)	1553014
558	35.7	0.0	0.9	chr17	4420856	4421067	(78836374)	C	MamGypLTR3	LTR/Gypsy	(393)	501	292	1553038
2542	15.0	23.9	1.2	chr17	5110749	5111335	(78146106)	C	MER4CL34	LTR/ERV1	(3)	762	1	1554453
1302	27.3	3.3	6.0	chr17	5287922	5288134	(77969307)	C	L2a	LINE/L2	(700)	2719	2515	1554832
197	29.5	3.2	0.0	chr17	5288167	5288227	(77969214)	C	L2b	LINE/L2	(215)	3160	3098	1554831
1631	10.5	6.1	1.6	chr17	5439459	5439710	(77817731)	+	MER21A	LTR/ERVL	1	264	(667)	1555142
499	27.7	6.1	0.5	chr17	5540526	5540681	(77716760)	+	MIRb	SINE/MIR	2	162	(106)	1555348
2742	4.2	0.0	0.0	chr17	5910350	5910659	(77346782)	+	AluY	SINE/Alu	1	310	(1)	1556024
337	27.0	0.0	1.3	chr17	5910943	5911017	(77346424)	C	MIRb	SINE/MIR	(142)	126	53	1556025
549	19.7	3.9	7.5	chr17	6323521	6323679	(76933762)	C	MIRb	SINE/MIR	(114)	154	2	1556850
437	24.4	1.5	3.0	chr17	6323761	6323895	(76933546)	C	MLT1O	LTR/ERVL-MaLR	(348)	194	62	1556851
660	30.5	7.4	3.6	chr17	6420228	6420657	(76836784)	C	LTR33	LTR/ERVL	(4)	511	49	1557048
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
18	10.4	0.0	0.0	chr17	6444345	6444375	(76813066)	+	(GGGGCG)n	Simple_repeat	1	31	(0)	1557111
277	24.6	0.0	0.0	chr17	6458054	6458122	(76799319)	C	MIRc	SINE/MIR	(195)	73	5	1557130
36	5.2	0.0	0.0	chr17	6544848	6544887	(76712554)	+	(CA)n	Simple_repeat	1	40	(0)	1557297
605	28.3	5.7	1.0	chr17	6545072	6545271	(76712170)	+	MIR	SINE/MIR	39	248	(14)	1557298
16	5.2	0.0	0.0	chr17	6753260	6753279	(76504162)	+	(T)n	Simple_repeat	1	20	(0)	1557647
1890	5.4	0.0	0.0	chr17	7012919	7013141	(76244300)	+	AluSx	SINE/Alu	77	299	(13)	1558085
2508	9.4	0.0	0.0	chr17	7130312	7130620	(76126821)	+	AluSc	SINE/Alu	1	309	(0)	1558290
1790	16.4	1.3	1.0	chr17	7263603	7263906	(75993535)	C	AluJb	SINE/Alu	(7)	305	1	1558515
205	37.3	8.6	2.8	chr17	7280337	7280554	(75976887)	C	L2	LINE/L2	(708)	2711	2480	1558565
258	5.6	0.0	0.0	chr17	7296286	7296334	(75961107)	+	FLAM_C	SINE/Alu	1	34	(99)	1558578
261	29.2	1.4	4.9	chr17	7351091	7351215	(75906226)	C	L2a	LINE/L2	(0)	3426	3255	1558665
13	27.5	0.0	2.2	chr17	7352583	7352628	(75904813)	+	(TCTCT)n	Simple_repeat	1	46	(0)	1558668
638	26.3	10.1	2.1	chr17	7704567	7704803	(75552638)	+	MIRc	SINE/MIR	11	268	(0)	1559374
236	24.3	14.2	3.7	chr17	7787361	7787452	(75469989)	C	Chap1_Mam	DNA/hAT-Charlie	(123)	219	114	1559522
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
13	18.1	0.0	7.0	chr17	8121641	8121683	(75135758)	+	(GGC)n	Simple_repeat	1	43	(0)	1560133
22	12.4	11.1	1.4	chr17	8123338	8123400	(75134041)	+	(TC)n	Simple_repeat	1	70	(0)	1560135
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
15	31.6	0.0	3.0	chr17	8189693	8189758	(75067683)	+	(CCT)n	Simple_repeat	1	66	(0)	1560268
274	30.1	5.0	2.6	chr17	8742712	8742827	(74514614)	+	MER5A	DNA/hAT-Charlie	36	154	(35)	1561378
239	29.7	5.0	4.2	chr17	8742828	8742865	(74514576)	C	MER5B	DNA/hAT-Charlie	(0)	122	7	1561377
745	29.9	2.0	2.4	chr17	8830533	8830779	(74426662)	C	MIR	SINE/MIR	(14)	248	3	1561549
2454	7.2	0.0	1.0	chr17	8830862	8831168	(74426273)	+	AluY	SINE/Alu	1	304	(7)	1561550
244	27.9	8.1	2.4	chr17	8964408	8964547	(74292894)	C	MIRb	SINE/MIR	(78)	190	26	1561788
19	19.9	3.3	3.2	chr17	9003572	9003632	(74253809)	+	(CGGCC)n	Simple_repeat	1	63	(0)	1561877
37	2.8	0.0	0.0	chr17	9170862	9170897	(74086544)	+	(AC)n	Simple_repeat	1	36	(0)	1562193
1856	15.4	0.0	2.0	chr17	9181991	9182283	(74075158)	C	AluJr	SINE/Alu	(25)	287	1	1562210
18	16.6	8.5	0.0	chr17	9817060	9817107	(73440334)	+	(CA)n	Simple_repeat	1	52	(0)	1563472
299	24.5	2.8	0.0	chr17	9980257	9980361	(73277080)	C	HAL1b	LINE/L1	(460)	1961	1867	1563792
2253	10.7	2.3	0.0	chr17	10118429	10118726	(73138715)	+	AluSx1	SINE/Alu	1	305	(7)	1564068
392	20.5	0.0	0.0	chr17	10184548	10184625	(73072816)	+	MER5A1	DNA/hAT-Charlie	1	78	(88)	1564209
893	22.7	13.9	10.5	chr17	10184631	10184925	(73072516)	+	MER21B	LTR/ERVL	1	300	(568)	1564210
1458	27.9	5.2	2.0	chr17	10762006	10762492	(72494949)	C	LTR33	LTR/ERVL	(7)	508	6	1565224
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
17	19.8	1.7	6.6	chr17	12789616	12789675	(70467766)	+	(GCG)n	Simple_repeat	1	61	(0)	1568664
6654	19.5	10.6	3.4	chr17	13215930	13218463	(70038978)	+	L1MC3	LINE/L1	5852	8580	(0)	1569398
2084	11.6	2.7	0.0	chr17	14068933	14069216	(69188225)	C	AluJr	SINE/Alu	(20)	292	1	1570862
13	19.6	0.0	0.0	chr17	14301327	14301356	(68956085)	+	(GCC)n	Simple_repeat	1	30	(0)	1571199
18	7.9	0.0	0.0	chr17	14301576	14301602	(68955839)	+	(CCG)n	Simple_repeat	1	27	(0)	1571200
940	22.9	4.3	1.9	chr17	15080943	15081147	(68176294)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	1572494
231	31.6	22.1	0.3	chr17	15081154	15081461	(68175980)	C	L2c	LINE/L2	(1638)	1781	1388	1572491
204	35.2	9.5	0.9	chr17	15491228	15491333	(67766108)	+	MIR3	SINE/MIR	31	146	(62)	1573140
65	5.3	7.3	1.5	chr17	15502710	15502832	(67754609)	+	(TC)n	Simple_repeat	1	132	(0)	1573165
1697	18.7	3.0	8.1	chr17	15894880	15895309	(67362132)	C	MLT2D	LTR/ERVL	(7)	407	1	1573847
425	29.0	5.4	7.5	chr17	15895392	15895544	(67361897)	C	L2	LINE/L2	(941)	2478	2330	1573846
799	18.7	8.8	1.6	chr17	15895545	15895734	(67361707)	+	MER3	DNA/hAT-Charlie	5	209	(0)	1573848
12	12.1	9.8	6.0	chr17	16931151	16931211	(66326230)	+	(GCCTCA)n	Simple_repeat	1	67	(0)	1575783
271	22.4	9.5	0.0	chr17	17342260	17342326	(65915115)	+	MIRc	SINE/MIR	68	141	(127)	1576491
243	31.0	6.5	0.0	chr17	17342416	17342502	(65914939)	+	Charlie10	DNA/hAT-Charlie	57	149	(2673)	1576492
261	21.7	1.4	2.8	chr17	17342502	17342572	(65914869)	+	MER5C	DNA/hAT-Charlie	219	288	(25)	1576493
368	35.1	12.1	0.8	chr17	17342573	17342923	(65914518)	+	L2a	LINE/L2	2947	3342	(33)	1576494
21	29.5	0.0	5.7	chr17	17477089	17477193	(65780248)	+	(GCCGCC)n	Simple_repeat	1	105	(0)	1576739
314	26.5	3.8	0.0	chr17	17477325	17477426	(65780015)	C	MIR3	SINE/MIR	(21)	187	82	1576740
258	30.2	24.1	0.8	chr17	17592241	17592614	(65664827)	C	L2a	LINE/L2	(1)	3425	2937	1576915
2275	9.2	0.3	0.0	chr17	17592645	17592938	(65664503)	+	AluSx	SINE/Alu	1	295	(17)	1576916
315	27.3	10.1	2.0	chr17	17676033	17676178	(65581263)	+	MIR3	SINE/MIR	4	162	(46)	1577133
52	2.1	0.0	0.0	chr17	17676456	17676504	(65580937)	+	(TG)n	Simple_repeat	1	49	(0)	1577134
12	4.3	8.3	0.0	chr17	17694816	17694839	(65562602)	+	(GCGGG)n	Simple_repeat	1	26	(0)	1577179
19	24.3	2.8	2.7	chr17	17752330	17752400	(65505041)	+	(GGCGG)n	Simple_repeat	1	73	(0)	1577284
20	14.5	0.0	0.0	chr17	17790068	17790105	(65467336)	+	(AGCCC)n	Simple_repeat	1	38	(0)	1577357
13	12.5	0.0	3.6	chr17	17790150	17790177	(65467264)	+	(TAA)n	Simple_repeat	1	28	(0)	1577358
15	4.7	0.0	0.0	chr17	17796675	17796696	(65460745)	+	(AGC)n	Simple_repeat	1	22	(0)	1577365
1903	14.7	0.4	0.0	chr17	17808467	17808738	(65448703)	C	AluJb	SINE/Alu	(31)	281	9	1577387
374	30.5	1.9	0.9	chr17	17808742	17808847	(65448594)	C	MIRb	SINE/MIR	(48)	220	114	1577388
249	35.0	6.5	3.1	chr17	17808884	17809107	(65448334)	C	L2a	LINE/L2	(3)	3423	3192	1577389
22	27.6	1.1	4.2	chr17	19004199	19004292	(64253149)	+	G-rich	Low_complexity	1	95	(0)	1579594
13	17.4	0.0	2.9	chr17	19648298	19648331	(63609110)	+	GA-rich	Low_complexity	1	34	(0)	1581022
1594	26.7	5.9	0.9	chr17	20133537	20134001	(63123440)	C	Zaphod	DNA/hAT-Tip100	(3384)	647	158	1582006
397	25.7	14.0	0.0	chr17	21072519	21072666	(62184775)	C	MER112	DNA/hAT-Charlie	(86)	175	4	1583587
294	23.7	1.7	8.8	chr17	21072968	21073092	(62184349)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	390	1583588
11	12.1	2.3	9.1	chr17	21213927	21213969	(62043472)	+	(CCCGGAT)n	Simple_repeat	1	44	(0)	1583854
281	21.6	17.3	9.5	chr17	21245532	21245700	(62011741)	C	MIR	SINE/MIR	(69)	199	15	1583910
29	0.0	0.0	0.0	chr17	21284781	21284807	(61972634)	+	(CGC)n	Simple_repeat	1	27	(0)	1584007
1179	19.1	5.5	6.8	chr17	21318656	21318956	(61938485)	+	MSTD	LTR/ERVL-MaLR	49	358	(38)	1584065
607	22.7	0.0	0.0	chr17	27367049	27367158	(55890283)	C	MER81	DNA/hAT-Blackjack	(4)	110	1	1586639
360	33.1	9.5	3.5	chr17	27367219	27367565	(55889876)	+	LTR88a	LTR/Gypsy?	257	626	(190)	1586640
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
236	27.2	7.2	1.4	chr17	28227085	28227188	(55030253)	C	MIR1_Amn	SINE/MIR	(91)	177	67	1588306
948	27.4	4.4	6.7	chr17	28251763	28251889	(55005552)	+	L2a	LINE/L2	3058	3185	(241)	1588333
17	25.4	4.5	1.4	chr17	28256325	28256391	(55001050)	+	(CCT)n	Simple_repeat	1	70	(0)	1588342
353	28.7	12.1	4.9	chr17	28372551	28372733	(54884708)	C	MIRb	SINE/MIR	(20)	248	51	1588529
226	36.1	8.2	4.1	chr17	28385377	28385691	(54871750)	C	L2c	LINE/L2	(19)	3368	3040	1588563
429	36.5	8.4	1.6	chr17	28544780	28545221	(54712220)	+	L2c	LINE/L2	2288	2762	(657)	1588891
395	32.5	0.0	0.0	chr17	28986484	28986614	(54270827)	C	MIRb	SINE/MIR	(94)	174	38	1589713
16	10.0	0.0	0.0	chr17	29002082	29002103	(54255338)	+	(T)n	Simple_repeat	1	22	(0)	1589751
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
2246	8.7	0.3	0.7	chr17	29078027	29078314	(54179127)	C	AluSx	SINE/Alu	(24)	288	2	1589890
28	3.3	0.0	0.0	chr17	29080016	29080046	(54177395)	+	(GGAGCT)n	Simple_repeat	1	31	(0)	1589892
569	24.0	13.7	0.9	chr17	29087171	29087380	(54170061)	+	MIRc	SINE/MIR	3	243	(25)	1589896
11	20.6	5.1	0.0	chr17	29117530	29117568	(54139873)	+	(CAGCCTC)n	Simple_repeat	1	41	(0)	1589926
13	4.3	3.9	3.7	chr17	29180178	29180203	(54077238)	+	(AGG)n	Simple_repeat	1	27	(0)	1590036
17	13.9	0.0	6.7	chr17	29180394	29180438	(54077003)	+	(AGCGC)n	Simple_repeat	1	45	(0)	1590037
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
512	23.1	1.7	1.7	chr17	30312088	30312206	(52945235)	+	UCON34	Unknown	1	119	(6)	1592331
229	34.4	14.9	0.0	chr17	30312362	30312521	(52944920)	+	MIRb	SINE/MIR	33	220	(48)	1592332
330	24.8	6.3	1.4	chr17	30312535	30312685	(52944756)	+	LTR88c	LTR/Gypsy?	242	401	(436)	1592333
799	23.9	21.7	2.5	chr17	31491286	31491689	(51765752)	C	L2a	LINE/L2	(4)	3422	2920	1594693
576	26.2	9.3	9.5	chr17	31672061	31672623	(51584818)	+	LTR33A	LTR/ERVL	1	531	(0)	1595051
1046	22.2	2.9	2.2	chr17	32127849	32128120	(51129321)	C	L1MD	LINE/L1	(1661)	4485	4212	1596128
26	21.3	1.3	5.1	chr17	32280803	32280880	(50976561)	+	(CT)n	Simple_repeat	1	79	(0)	1596455
1788	6.5	0.0	0.0	chr17	32305718	32305931	(50951510)	+	AluY	SINE/Alu	82	295	(16)	1596512
245	25.9	8.6	3.4	chr17	32307196	32307283	(50950158)	+	L2b	LINE/L2	3282	3374	(1)	1596517
18	19.1	3.7	7.1	chr17	32486611	32486692	(50770749)	+	(GGCG)n	Simple_repeat	1	85	(0)	1596915
345	27.0	12.1	1.2	chr17	33153077	33153254	(50104187)	C	MIRb	SINE/MIR	(52)	216	10	1598072
241	25.0	9.1	4.8	chr17	33929728	33929832	(49327609)	C	X7A_LINE	LINE/CR1	(146)	121	12	1599583
273	26.0	10.5	3.0	chr17	33978368	33978500	(49278941)	+	MIR	SINE/MIR	33	176	(92)	1599670
13	0.0	3.7	7.1	chr17	34157102	34157128	(49100313)	+	(CCT)n	Simple_repeat	1	28	(0)	1599971
13	19.8	4.0	7.8	chr17	34157180	34157253	(49100188)	+	G-rich	Low_complexity	1	77	(0)	1599972
56	0.0	0.0	0.0	chr17	34157871	34157918	(49099523)	+	(GT)n	Simple_repeat	1	48	(0)	1599973
42	0.0	0.0	0.0	chr17	34157960	34157995	(49099446)	+	(GT)n	Simple_repeat	1	36	(0)	1599973
567	29.1	2.0	2.0	chr17	34391300	34391450	(48865991)	C	MIR3	SINE/MIR	(21)	187	37	1600294
785	26.4	14.0	2.8	chr17	34391573	34392001	(48865440)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	28	1600295
712	28.4	11.8	3.5	chr17	34562224	34562595	(48694846)	C	MLT1I	LTR/ERVL-MaLR	(4)	407	1	1600651
537	27.7	7.8	1.7	chr17	34562718	34562956	(48694485)	+	MIRb	SINE/MIR	6	268	(0)	1600652
332	26.6	5.0	7.4	chr17	34981367	34981488	(48275953)	C	Charlie4z	DNA/hAT-Charlie	(2)	165	47	1601462
1364	10.8	4.3	1.0	chr17	35162596	35162799	(48094642)	C	AluSq2	SINE/Alu	(19)	294	84	1601840
801	28.3	5.3	3.5	chr17	35162957	35163216	(48094225)	+	MIRb	SINE/MIR	4	268	(0)	1601841
469	26.8	13.6	0.5	chr17	35740737	35740927	(47516514)	+	MIR	SINE/MIR	7	226	(36)	1602706
13	20.5	6.7	0.0	chr17	35741251	35741295	(47516146)	+	(CGCTG)n	Simple_repeat	1	48	(0)	1602707
188	29.3	2.4	6.8	chr17	35969910	35969997	(47287444)	C	L2c	LINE/L2	(4)	3383	3300	1603176
649	22.3	4.1	0.0	chr17	35970016	35970154	(47287287)	+	MER105	DNA/hAT-Charlie	44	188	(15)	1603177
17	18.8	0.0	0.0	chr17	36182416	36182446	(47074995)	+	(TG)n	Simple_repeat	1	31	(0)	1603511
329	29.5	21.0	0.0	chr17	36614614	36614786	(46642655)	+	MIRb	SINE/MIR	49	267	(1)	1604263
413	19.5	6.6	0.0	chr17	36687775	36687887	(46569554)	C	LTR16C	LTR/ERVL	(0)	489	369	1604420
303	30.3	6.7	0.9	chr17	36855539	36855782	(46401659)	C	L2c	LINE/L2	(153)	3234	2966	1604791
14	16.1	0.0	0.0	chr17	36855818	36855846	(46401595)	+	(CTTT)n	Simple_repeat	1	29	(0)	1604795
2262	12.0	0.3	1.3	chr17	36855849	36855874	(46401567)	C	AluSc8	SINE/Alu	(5)	306	284	1604796
27	0.0	0.0	3.3	chr17	36855875	36855904	(46401537)	+	(TATT)n	Simple_repeat	1	30	(0)	1604797
2262	12.0	0.3	1.3	chr17	36855905	36856186	(46401255)	C	AluSc8	SINE/Alu	(28)	283	1	1604796
454	28.3	5.7	12.6	chr17	36876888	36877077	(46380364)	+	MER5B	DNA/hAT-Charlie	3	178	(0)	1604849
15	22.1	2.0	2.0	chr17	36877161	36877209	(46380232)	+	(GCCAGG)n	Simple_repeat	1	50	(0)	1604850
485	24.0	15.7	2.1	chr17	36877322	36877508	(46379933)	C	MIRb	SINE/MIR	(43)	225	9	1604851
254	28.4	2.6	0.0	chr17	36921692	36921765	(46335676)	C	MIRb	SINE/MIR	(128)	140	65	1604955
19	22.2	1.9	0.0	chr17	36948809	36948860	(46308581)	+	(CGCGCA)n	Simple_repeat	1	53	(0)	1604977
459	25.9	5.1	0.0	chr17	38550607	38550718	(44706723)	+	L2c	LINE/L2	3270	3387	(0)	1608079
372	31.7	7.0	0.0	chr17	38704605	38704748	(44552693)	+	L2c	LINE/L2	3204	3387	(0)	1608409
17	15.7	0.0	6.2	chr17	38720293	38720343	(44537098)	+	(CCCGGC)n	Simple_repeat	1	47	(0)	1608435
318	22.9	16.7	0.0	chr17	38896270	38896374	(44361067)	C	MIR3	SINE/MIR	(11)	197	72	1608834
381	33.5	1.4	5.2	chr17	38896610	38896839	(44360602)	C	MIRc	SINE/MIR	(18)	250	30	1608835
224	19.2	1.4	6.4	chr17	39232470	39232547	(44024894)	C	L2c	LINE/L2	(297)	3090	3017	1609586
1890	15.6	5.6	0.3	chr17	39555712	39555828	(43701613)	+	AluJb	SINE/Alu	1	117	(195)	1610354
44	0.0	0.0	0.0	chr17	39604756	39604795	(43652646)	+	(T)n	Simple_repeat	1	40	(0)	1610445
219	27.4	5.2	2.7	chr17	39635411	39635485	(43621956)	C	MIRb	SINE/MIR	(145)	123	47	1610500
216	35.5	2.4	9.5	chr17	39752604	39752740	(43504701)	+	MER91A	DNA/hAT-Tip100	30	156	(40)	1610712
193	28.4	17.7	0.0	chr17	39755364	39755479	(43501962)	C	MIR3	SINE/MIR	(25)	183	43	1610715
343	24.8	10.8	4.1	chr17	39927856	39928002	(43329439)	C	MIRc	SINE/MIR	(109)	159	2	1611011
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
15	7.8	0.0	3.5	chr17	40099088	40099116	(43158325)	+	(GGCGG)n	Simple_repeat	1	29	(0)	1611348
241	31.4	11.1	2.5	chr17	40317007	40317137	(42940304)	+	MIR3	SINE/MIR	16	158	(50)	1611822
23	5.5	5.3	0.0	chr17	40423407	40423444	(42833997)	+	(TTTA)n	Simple_repeat	1	40	(0)	1612011
2239	8.9	4.3	0.0	chr17	40489526	40489817	(42767624)	+	AluSq2	SINE/Alu	1	305	(8)	1612153
191	22.2	0.0	0.0	chr17	40489845	40489880	(42767561)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1612154
304	28.6	0.0	5.2	chr17	40489881	40489976	(42767465)	+	MER5B	DNA/hAT-Charlie	63	153	(25)	1612155
248	25.6	6.0	1.3	chr17	40490012	40490090	(42767351)	+	MER5A1	DNA/hAT-Charlie	78	160	(6)	1612156
2089	13.8	0.6	0.3	chr17	41741354	41741664	(41515777)	+	AluJb	SINE/Alu	1	312	(0)	1614177
212	35.0	8.0	1.0	chr17	41741920	41742023	(41515418)	+	L2c	LINE/L2	3258	3369	(6)	1614176
2304	11.6	0.0	0.0	chr17	42054580	42054881	(41202560)	C	AluSx1	SINE/Alu	(10)	302	1	1614849
189	36.6	1.0	1.9	chr17	42117079	42117181	(41140260)	+	L3	LINE/CR1	821	922	(3177)	1614973
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
19	26.6	4.0	3.8	chr17	42276228	42276328	(40981113)	+	(GCTC)n	Simple_repeat	1	105	(0)	1615285
13	15.8	2.7	2.6	chr17	42276584	42276620	(40980821)	+	(GGTGCC)n	Simple_repeat	1	38	(0)	1615286
618	18.8	17.7	0.0	chr17	42744395	42744538	(40512903)	C	MER96	DNA/hAT-Tip100	(0)	175	1	1616275
13	15.5	9.3	0.0	chr17	42745050	42745095	(40512346)	+	(GCGCCCC)n	Simple_repeat	1	50	(0)	1616277
187	33.1	6.1	6.7	chr17	42773138	42773257	(40484184)	+	MIR1_Amn	SINE/MIR	6	118	(90)	1616344
265	19.3	4.6	4.6	chr17	42892217	42892303	(40365138)	+	L1ME4b	LINE/L1	799	885	(7)	1616563
222	22.5	6.3	4.3	chr17	43041971	43042063	(40215378)	C	X8_LINE	LINE/CR1	(29)	267	173	1616941
31	0.0	0.0	0.0	chr17	43530610	43530636	(39726805)	+	(GT)n	Simple_repeat	1	27	(0)	1618040
13	16.8	0.0	0.0	chr17	43530719	43530746	(39726695)	+	(CATTC)n	Simple_repeat	1	28	(0)	1618041
182	21.4	10.3	6.7	chr17	43531334	43531408	(39726033)	C	Penelope1_Vert	LINE/Penelope	(498)	589	512	1618042
225	35.5	8.4	2.6	chr17	43691604	43691759	(39565682)	+	MIRc	SINE/MIR	71	236	(32)	1618410
380	28.5	2.7	7.7	chr17	43846042	43846197	(39411244)	+	L1ME4a	LINE/L1	5977	6124	(0)	1618715
1179	24.6	11.4	2.0	chr17	43846513	43846956	(39410485)	C	Charlie4a	DNA/hAT-Charlie	(16)	492	2	1618716
2732	13.2	3.9	6.8	chr17	43916363	43916992	(39340449)	+	MER4B	LTR/ERV1	1	900	(0)	1618852
489	25.9	0.7	0.7	chr17	43917325	43917460	(39339981)	+	MLT1H	LTR/ERVL-MaLR	95	230	(319)	1618853
400	33.2	1.3	10.4	chr17	43987657	43987905	(39269536)	C	L2b	LINE/L2	(1)	3374	3149	1619003
24	13.0	0.0	0.0	chr17	44087473	44087538	(39169903)	+	(TCC)n	Simple_repeat	1	66	(0)	1619202
12	9.3	7.7	4.8	chr17	44309905	44309943	(38947498)	+	(CCTGGCT)n	Simple_repeat	1	42	(0)	1619672
243	29.0	9.8	0.8	chr17	44327646	44327777	(38929664)	C	MIR3	SINE/MIR	(28)	180	45	1619704
505	26.2	4.0	4.7	chr17	44327841	44328040	(38929401)	+	MIR	SINE/MIR	67	268	(0)	1619705
346	32.4	0.0	0.9	chr17	44361704	44361812	(38895629)	C	MIRb	SINE/MIR	(58)	210	103	1619782
19	19.1	1.3	7.8	chr17	44384767	44384842	(38872599)	+	(GCGGTGG)n	Simple_repeat	1	77	(0)	1619821
1925	11.4	5.1	0.0	chr17	44542776	44543055	(38714386)	C	AluSx1	SINE/Alu	(17)	295	1	1620177
11	20.7	0.0	2.9	chr17	44547924	44547958	(38709483)	+	G-rich	Low_complexity	1	35	(0)	1620188
13	31.1	5.4	2.1	chr17	44548195	44548286	(38709155)	+	GA-rich	Low_complexity	1	97	(0)	1620189
2356	10.1	0.0	0.0	chr17	44594502	44594799	(38662642)	C	AluSx1	SINE/Alu	(14)	298	1	1620281
17	20.2	2.1	2.1	chr17	44656480	44656526	(38600915)	+	(GGC)n	Simple_repeat	1	48	(0)	1620447
421	27.7	9.0	1.4	chr17	45051053	45051195	(38206246)	C	MIR	SINE/MIR	(80)	182	28	1621258
33	17.5	0.0	8.5	chr17	45132523	45132628	(38124813)	+	G-rich	Low_complexity	1	106	(0)	1621409
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
12	5.5	0.0	0.0	chr17	45248052	45248070	(38009371)	+	(GGA)n	Simple_repeat	1	19	(0)	1621666
1660	9.1	0.5	0.0	chr17	45323593	45323813	(37933628)	+	AluSx1	SINE/Alu	1	222	(90)	1621797
245	33.7	3.4	6.1	chr17	45323905	45324084	(37933357)	+	L2	LINE/L2	2306	2480	(939)	1621798
207	30.1	6.4	0.0	chr17	45672812	45672884	(37584557)	+	L2b	LINE/L2	3240	3317	(58)	1622561
48	22.2	1.6	6.5	chr17	45784098	45784280	(37473161)	+	G-rich	Low_complexity	1	186	(0)	1622787
287	31.2	5.3	3.6	chr17	45813652	45813802	(37443639)	+	MIR1_Amn	SINE/MIR	21	161	(101)	1622842
547	22.5	11.4	1.1	chr17	45944121	45944300	(37313141)	C	MIRc	SINE/MIR	(50)	218	18	1623088
1385	27.6	0.3	2.1	chr17	46106867	46107254	(37150187)	+	L1MDb	LINE/L1	13	393	(6016)	1623386
2755	25.0	14.0	3.3	chr17	46107255	46108651	(37148790)	+	L2a	LINE/L2	1846	3417	(9)	1623387
315	28.0	3.9	0.0	chr17	46790326	46790425	(36467016)	C	MER5B	DNA/hAT-Charlie	(0)	178	75	1624720
362	29.4	4.5	9.3	chr17	46797022	46797257	(36460184)	+	MER103C	DNA/hAT-Charlie	67	290	(7)	1624736
195	33.3	3.5	5.1	chr17	46797323	46797439	(36460002)	C	L2c	LINE/L2	(225)	3162	3048	1624737
498	28.2	2.8	1.1	chr17	46797519	46797693	(36459748)	+	L1M5	LINE/L1	5503	5691	(552)	1624738
743	29.2	5.9	2.7	chr17	46797694	46797928	(36459513)	+	L1ME3F	LINE/L1	5748	5994	(249)	1624739
12	6.9	2.6	10.3	chr17	46851443	46851480	(36405961)	+	G-rich	Low_complexity	1	39	(0)	1624848
2321	7.8	0.0	0.0	chr17	47254960	47255278	(36002163)	C	AluSx1	SINE/Alu	(0)	312	1	1625668
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
189	29.2	7.2	5.8	chr17	48531412	48531480	(34725961)	+	L2	LINE/L2	548	617	(2802)	1628056
34	2.8	0.0	0.0	chr17	48641720	48641756	(34615685)	+	(CAGGGGCGG)n	Simple_repeat	1	37	(0)	1628175
14	16.1	2.1	6.2	chr17	48817324	48817370	(34440071)	+	(CAGCC)n	Simple_repeat	1	48	(0)	1628551
365	28.5	11.3	0.6	chr17	48817498	48817663	(34439778)	+	MIRc	SINE/MIR	2	187	(81)	1628552
2366	7.6	0.7	4.4	chr17	48964714	48964857	(34292584)	+	AluSp	SINE/Alu	1	145	(168)	1628934
647	26.4	4.1	3.2	chr17	48965758	48965976	(34291465)	C	MIR	SINE/MIR	(38)	224	4	1628937
2377	8.8	0.0	0.0	chr17	48965978	48966271	(34291170)	+	AluSg7	SINE/Alu	1	294	(15)	1628938
1951	13.4	2.0	3.8	chr17	49031490	49031802	(34225639)	C	AluSz	SINE/Alu	(5)	307	1	1629076
15	20.9	0.0	7.0	chr17	49031978	49032034	(34225407)	+	G-rich	Low_complexity	1	57	(0)	1629077
2245	9.3	0.0	0.0	chr17	49066108	49066385	(34191056)	+	AluSq2	SINE/Alu	1	278	(35)	1629137
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
12	30.5	0.0	2.0	chr17	49455607	49455656	(33801785)	+	G-rich	Low_complexity	1	50	(0)	1629976
210	38.4	4.3	0.0	chr17	49485972	49486083	(33771358)	C	L2b	LINE/L2	(452)	2967	2851	1630029
18	27.0	1.0	0.9	chr17	49506648	49506711	(33750730)	+	G-rich	Low_complexity	1	64	(0)	1630069
207	30.5	5.5	0.7	chr17	49570522	49570676	(33686765)	C	MIRb	SINE/MIR	(92)	176	14	1630180
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
12	31.4	4.5	0.0	chr17	49763533	49763599	(33493842)	+	(CCCTCAC)n	Simple_repeat	1	70	(0)	1630519
241	32.1	15.0	0.7	chr17	49944113	49944315	(33313126)	C	MIRb	SINE/MIR	(5)	263	20	1630861
60	26.7	4.2	2.0	chr17	49963597	49963832	(33293609)	+	(GT)n	Simple_repeat	1	246	(0)	1630904
12	24.6	3.7	3.6	chr17	49965788	49965841	(33291600)	+	(TTCC)n	Simple_repeat	1	56	(0)	1630906
13	13.7	2.9	2.9	chr17	49965840	49965873	(33291568)	+	(TTTTGG)n	Simple_repeat	1	35	(0)	1630907
349	29.6	3.2	4.4	chr17	49965904	49966062	(33291379)	C	MIR3	SINE/MIR	(38)	170	14	1630908
326	26.0	14.4	0.7	chr17	50117149	50117269	(33140172)	+	L2b	LINE/L2	3238	3385	(2)	1631183
194	24.1	3.6	0.0	chr17	50128086	50128139	(33129302)	+	L2a	LINE/L2	3290	3345	(81)	1631210
16	19.0	1.6	7.8	chr17	50149983	50150045	(33107396)	+	(GCC)n	Simple_repeat	1	64	(0)	1631237
14	23.2	2.4	0.0	chr17	50150091	50150131	(33107310)	+	(CGG)n	Simple_repeat	1	42	(0)	1631238
11	13.3	5.7	2.7	chr17	50201182	50201216	(33056225)	+	(CTCCCG)n	Simple_repeat	1	37	(0)	1631308
12	26.8	0.0	0.0	chr17	50201414	50201453	(33055988)	+	(CTTGGC)n	Simple_repeat	1	40	(0)	1631309
772	34.4	8.4	0.7	chr17	50205109	50205690	(33051751)	C	L2	LINE/L2	(932)	2487	1857	1631311
471	26.2	5.1	0.6	chr17	50209267	50209439	(33048002)	C	MIR3	SINE/MIR	(2)	206	30	1631317
16	21.7	3.1	4.5	chr17	50211088	50211151	(33046290)	+	(CTCC)n	Simple_repeat	1	66	(0)	1631318
341	26.6	10.3	8.9	chr17	50270072	50270271	(32987170)	C	MIR	SINE/MIR	(0)	262	53	1631435
31	15.1	12.9	2.9	chr17	50304822	50304976	(32952465)	+	(TGTTACA)n	Simple_repeat	1	175	(0)	1631516
2261	11.6	0.3	0.0	chr17	50333142	50333442	(32923999)	+	AluSx1	SINE/Alu	1	302	(10)	1631585
328	33.3	14.5	2.4	chr17	50333635	50334210	(32923231)	+	L1M6	LINE/L1	904	1560	(4936)	1631584
12	15.6	9.9	5.1	chr17	50542056	50542126	(32715315)	+	(CCGCAG)n	Simple_repeat	1	78	(0)	1632003
310	23.3	18.2	0.8	chr17	50551285	50551402	(32706039)	C	MIR	SINE/MIR	(64)	166	19	1632015
1848	9.9	6.2	0.0	chr17	50688928	50689199	(32568242)	+	AluSx1	SINE/Alu	8	297	(15)	1632253
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
12	21.0	5.9	1.9	chr17	51166774	51166824	(32090617)	+	(CGCGCC)n	Simple_repeat	1	54	(0)	1633282
235	25.5	0.0	0.0	chr17	54100398	54100448	(29156993)	C	MLT1L	LTR/ERVL-MaLR	(218)	392	342	1637621
247	34.0	4.9	6.6	chr17	54100677	54100947	(29156494)	C	L3	LINE/CR1	(644)	3455	3190	1637622
187	36.0	5.3	0.8	chr17	56141245	56141370	(27116071)	C	OldhAT1	DNA/hAT-Ac	(1713)	1135	1004	1640813
31	11.4	0.0	0.0	chr17	56665990	56666038	(26591403)	+	(AC)n	Simple_repeat	1	49	(0)	1641705
337	22.4	3.8	3.8	chr17	56781352	56781430	(26476011)	+	L2c	LINE/L2	3289	3367	(20)	1641963
371	32.5	7.3	3.5	chr17	56781692	56781863	(26475578)	C	MIRb	SINE/MIR	(68)	200	22	1641964
218	36.2	13.2	3.5	chr17	57313717	57313932	(25943509)	C	L2b	LINE/L2	(17)	3358	3104	1643062
1742	19.0	3.1	9.6	chr17	57313933	57314350	(25943091)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1643063
2354	10.1	0.3	0.3	chr17	57906689	57906995	(25350446)	+	AluSq2	SINE/Alu	1	307	(6)	1644085
16	17.2	2.6	0.0	chr17	57956653	57956691	(25300750)	+	(TCTCCTC)n	Simple_repeat	1	40	(0)	1644191
913	24.6	7.8	0.4	chr17	57956796	57957032	(25300409)	C	CR1_Mam	LINE/CR1	(452)	1752	1497	1644192
441	24.3	10.6	3.2	chr17	58661754	58661910	(24595531)	+	MIRb	SINE/MIR	41	210	(58)	1645457
14	14.2	3.2	0.0	chr17	58662069	58662099	(24595342)	+	(TGTA)n	Simple_repeat	1	32	(0)	1645458
307	7.5	0.0	0.0	chr17	58662101	58662140	(24595301)	C	Alu	SINE/Alu	(93)	40	1	1645459
1604	8.4	0.5	0.0	chr17	58662170	58662372	(24595069)	+	AluY	SINE/Alu	1	204	(107)	1645460
15	28.3	0.0	1.9	chr17	60600533	60600585	(22656856)	+	(CGC)n	Simple_repeat	1	53	(0)	1649630
7261	22.4	5.1	4.0	chr17	61117891	61118754	(22138687)	C	L1MDa	LINE/L1	(5379)	1254	284	1650524
396	31.4	5.5	4.3	chr17	61324012	61324238	(21933203)	+	L2c	LINE/L2	3138	3387	(0)	1650874
30	5.5	0.0	0.0	chr17	61409319	61409356	(21848085)	+	(CGGCCCCT)n	Simple_repeat	1	38	(0)	1651014
637	30.9	7.6	0.0	chr17	61467791	61468010	(21789431)	+	MIRb	SINE/MIR	23	260	(8)	1651102
27	3.5	0.0	0.0	chr17	62762031	62762060	(20495381)	+	(CAG)n	Simple_repeat	1	30	(0)	1653654
12	15.8	0.0	3.3	chr17	63446789	63446818	(19810623)	+	(CCCCG)n	Simple_repeat	1	30	(0)	1654720
2029	9.7	7.0	0.0	chr17	63848520	63848797	(19408644)	+	AluSx	SINE/Alu	1	299	(13)	1655457
12	22.6	1.9	5.7	chr17	63848843	63848894	(19408547)	+	(CCAG)n	Simple_repeat	1	53	(0)	1655458
409	28.0	10.0	2.9	chr17	63849712	63850066	(19407375)	C	L2a	LINE/L2	(51)	3375	3000	1655453
15	13.9	0.0	0.0	chr17	63881605	63881628	(19375813)	+	(TC)n	Simple_repeat	1	24	(0)	1655520
234	14.8	3.6	1.8	chr17	64005698	64005752	(19251689)	+	L2b	LINE/L2	3098	3153	(222)	1655732
672	25.6	17.5	0.9	chr17	64005782	64006100	(19251341)	C	L2a	LINE/L2	(1)	3425	3043	1655733
999	18.2	0.0	0.0	chr17	64218100	64218258	(19039183)	+	AluSz6	SINE/Alu	137	295	(17)	1656099
234	29.6	15.3	11.2	chr17	64677136	64677359	(18580082)	+	MLT1M	LTR/ERVL-MaLR	415	649	(23)	1657061
953	11.8	7.3	3.3	chr17	64677550	64677733	(18579708)	+	MER33	DNA/hAT-Charlie	31	222	(102)	1657062
1996	16.1	0.0	1.9	chr17	64711712	64712027	(18545414)	+	AluJb	SINE/Alu	1	310	(2)	1657154
2194	9.9	0.0	5.1	chr17	64712225	64712538	(18544903)	+	AluSz	SINE/Alu	1	298	(14)	1657155
18	26.7	1.3	3.9	chr17	64781328	64781408	(18476033)	+	(CCCACC)n	Simple_repeat	1	78	(0)	1657317
474	28.2	6.2	6.7	chr17	65136856	65137049	(18120392)	C	MIRb	SINE/MIR	(16)	252	60	1658061
30	16.4	0.0	3.1	chr17	65137148	65137212	(18120229)	+	(TCC)n	Simple_repeat	1	65	(0)	1658062
526	18.6	4.8	1.4	chr17	65519196	65519337	(17738104)	+	L1ME4a	LINE/L1	5975	6121	(3)	1658840
2151	11.5	0.3	1.3	chr17	65628968	65629271	(17628170)	C	AluSx	SINE/Alu	(11)	301	1	1659034
30	30.3	3.4	2.6	chr17	66302124	66302272	(16955169)	+	GA-rich	Low_complexity	1	154	(0)	1660070
50	0.0	0.0	0.0	chr17	66302333	66302377	(16955064)	+	(GCC)n	Simple_repeat	1	45	(0)	1660071
518	27.6	2.5	0.6	chr17	66976148	66976321	(16281120)	+	MIRc	SINE/MIR	2	175	(93)	1661160
72	27.7	4.0	2.2	chr17	66976322	66976622	(16280819)	+	(CTCC)n	Simple_repeat	1	313	(0)	1661161
297	11.8	7.3	0.0	chr17	67247146	67247196	(16010245)	C	MADE1	DNA/TcMar-Mariner	(25)	55	1	1661592
2338	11.1	0.0	0.0	chr17	67752776	67753081	(15504360)	C	AluSp	SINE/Alu	(7)	306	1	1662695
355	29.6	16.8	2.4	chr17	67753082	67753205	(15504236)	+	L2	LINE/L2	2498	2645	(774)	1662694
373	21.4	0.0	0.0	chr17	67753210	67753279	(15504162)	+	LTR28C	LTR/ERV1	833	902	(227)	1662696
285	28.1	7.8	2.5	chr17	67753296	67753452	(15503989)	+	L2	LINE/L2	2665	2830	(589)	1662694
2207	11.2	0.0	1.6	chr17	68087637	68087939	(15169502)	C	AluSz6	SINE/Alu	(14)	298	1	1663503
1951	16.3	0.6	1.0	chr17	68088142	68088454	(15168987)	C	AluJr	SINE/Alu	(0)	312	1	1663504
20	7.0	0.0	0.0	chr17	68205965	68205994	(15051447)	+	(GGC)n	Simple_repeat	1	30	(0)	1663743
36	2.9	0.0	0.0	chr17	72335772	72335806	(10921635)	+	(TG)n	Simple_repeat	1	35	(0)	1670205
20	27.8	0.0	0.0	chr17	72335809	72335860	(10921581)	+	(AC)n	Simple_repeat	1	52	(0)	1670206
279	36.7	6.7	5.2	chr17	73341789	73342038	(9915403)	C	MIR	SINE/MIR	(1)	261	8	1672124
15	24.6	0.0	5.2	chr17	73342157	73342214	(9915227)	+	(CCCCT)n	Simple_repeat	1	58	(0)	1672125
1911	19.8	4.8	17.9	chr17	73481367	73481969	(9775472)	+	MLT2B1	LTR/ERVL	1	520	(0)	1672408
329	22.7	0.4	2.7	chr17	73551644	73551741	(9705700)	C	L2b	LINE/L2	(47)	3379	3259	1672531
8169	22.9	1.9	1.0	chr17	73566405	73568040	(9689401)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	1672561
973	16.4	1.2	0.0	chr17	73683602	73683760	(9573681)	+	MER5A1	DNA/hAT-Charlie	1	161	(5)	1672776
240	26.7	1.6	0.0	chr17	73683813	73683872	(9573569)	+	MIR	SINE/MIR	12	72	(190)	1672777
227	38.1	2.0	2.0	chr17	73683898	73683996	(9573445)	C	L2b	LINE/L2	(35)	3340	3242	1672778
402	27.0	1.6	2.1	chr17	73684059	73684248	(9573193)	C	L2b	LINE/L2	(1)	3425	3075	1672779
12	21.7	0.0	6.2	chr17	73786102	73786149	(9471292)	+	(CTCCCC)n	Simple_repeat	1	48	(0)	1672946
867	24.7	3.4	3.0	chr17	74115441	74115703	(9141738)	C	LTR16E1	LTR/ERVL	(32)	506	243	1673517
199	30.5	3.5	3.5	chr17	74180284	74180368	(9077073)	C	L3	LINE/CR1	(349)	3750	3666	1673630
726	16.7	0.0	2.5	chr17	74367999	74368118	(8889323)	+	AluJr	SINE/Alu	1	117	(195)	1674019
277	33.9	9.4	6.0	chr17	74539597	74539976	(8717465)	+	L2b	LINE/L2	2982	3375	(0)	1674336
215	26.9	13.0	8.6	chr17	74632117	74632372	(8625069)	+	L2c	LINE/L2	2938	3206	(181)	1674505
28	23.7	1.4	0.0	chr17	74776580	74776653	(8480788)	+	(GTCGG)n	Simple_repeat	1	75	(0)	1674793
235	31.1	10.0	2.2	chr17	74776881	74777018	(8480423)	+	L3	LINE/CR1	3934	4083	(16)	1674794
15	20.2	0.0	6.7	chr17	74852344	74852388	(8405053)	+	(CG)n	Simple_repeat	1	45	(0)	1674875
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
2197	11.4	0.0	0.3	chr17	74982994	74983005	(8274436)	C	AluSz	SINE/Alu	(14)	298	287	1675117
68	5.2	0.0	0.0	chr17	74983006	74983084	(8274357)	+	(TTATG)n	Simple_repeat	1	79	(0)	1675118
444	26.3	17.1	1.7	chr17	75012148	75012383	(8245058)	C	L2a	LINE/L2	(4)	3422	3143	1675179
15	24.3	3.8	0.0	chr17	75456678	75456730	(7800711)	+	GA-rich	Low_complexity	1	55	(0)	1676192
202	29.5	2.6	8.2	chr17	75517407	75517528	(7739913)	C	OldhAT1	DNA/hAT-Ac	(347)	2501	2387	1676284
20	18.1	3.3	3.2	chr17	75878650	75878709	(7378732)	+	(CCGC)n	Simple_repeat	1	62	(0)	1676939
400	36.4	8.4	1.7	chr17	75895536	75895823	(7361618)	+	L2c	LINE/L2	3018	3326	(61)	1676982
24	20.0	5.3	1.2	chr17	75896642	75896717	(7360724)	+	G-rich	Low_complexity	1	80	(0)	1676984
19	26.7	0.0	3.0	chr17	75897027	75897092	(7360349)	+	G-rich	Low_complexity	1	66	(0)	1676985
289	25.2	5.7	2.9	chr17	75962675	75962776	(7294665)	C	MIRb	SINE/MIR	(98)	170	66	1677107
1099	19.4	0.0	5.3	chr17	75962794	75962849	(7294592)	+	L1PB4	LINE/L1	5928	5979	(177)	1677108
2304	9.8	1.6	0.0	chr17	75962850	75963154	(7294287)	+	AluSx1	SINE/Alu	1	310	(2)	1677109
14	18.3	2.7	0.0	chr17	75979188	75979224	(7278217)	+	(CCCGG)n	Simple_repeat	1	38	(0)	1677148
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
1734	11.6	0.4	0.0	chr17	76388660	76388891	(6868550)	C	AluSz	SINE/Alu	(77)	235	3	1677953
2363	10.2	0.0	1.0	chr17	76505742	76506055	(6751386)	+	AluSz	SINE/Alu	1	311	(1)	1678157
248	19.0	8.3	10.4	chr17	76506056	76506103	(6751338)	+	LTR107_Mam	LTR	529	570	(0)	1678156
240	23.9	13.2	1.1	chr17	76506104	76506196	(6751245)	C	MIRb	SINE/MIR	(141)	127	22	1678148
186	26.7	11.8	0.0	chr17	76506219	76506293	(6751148)	C	L2	LINE/L2	(606)	2813	2729	1678158
1398	20.3	0.8	0.4	chr17	76694585	76694845	(6562596)	C	AluJb	SINE/Alu	(10)	302	41	1678555
2204	9.2	0.0	0.7	chr17	76694896	76695188	(6562253)	+	AluSq2	SINE/Alu	21	311	(2)	1678556
21	33.7	2.4	2.3	chr17	76736257	76736383	(6521058)	+	G-rich	Low_complexity	1	130	(0)	1678635
2399	8.9	0.0	0.0	chr17	76951049	76951350	(6306091)	C	AluSx	SINE/Alu	(10)	302	1	1679088
654	27.3	6.4	2.4	chr17	76951415	76951624	(6305817)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1679089
188	25.9	19.6	3.9	chr17	76966602	76966806	(6290635)	C	L2c	LINE/L2	(32)	3355	3111	1679127
446	29.4	3.3	1.4	chr17	76968600	76968747	(6288694)	C	MIR	SINE/MIR	(16)	246	96	1679132
242	29.9	1.3	0.0	chr17	76969746	76969822	(6287619)	C	Tigger4	DNA/TcMar-Tigger	(620)	2111	2034	1679133
383	23.9	22.3	0.3	chr17	77032957	77033242	(6224199)	+	LTR33A_	LTR/ERVL	12	369	(151)	1679286
478	28.4	0.0	3.0	chr17	77033338	77033504	(6223937)	C	MER70C	LTR/ERVL	(23)	508	347	1679287
1728	13.2	2.9	0.4	chr17	77103437	77103709	(6153732)	C	AluSz6	SINE/Alu	(0)	312	33	1679453
299	20.5	4.3	3.3	chr17	77103710	77103800	(6153641)	+	MER92B	LTR/ERV1	545	636	(0)	1679454
200	30.2	9.3	0.0	chr17	77103911	77104036	(6153405)	+	L2b	LINE/L2	3025	3163	(212)	1679455
2819	9.9	3.8	6.0	chr17	77104812	77105236	(6152205)	C	MER4A1	LTR/ERV1	(52)	420	2	1679457
501	24.4	4.2	10.9	chr17	77556588	77556844	(5700597)	+	LTR16	LTR/ERVL	86	324	(114)	1680234
232	32.2	5.3	2.2	chr17	77787486	77787577	(5469864)	C	L2c	LINE/L2	(0)	3387	3293	1680641
240	30.9	9.7	7.5	chr17	77787592	77788005	(5469436)	C	L2b	LINE/L2	(9)	3366	2933	1680642
20	16.7	0.0	7.9	chr17	78128297	78128359	(5129082)	+	(CCTCC)n	Simple_repeat	1	63	(0)	1681240
1024	4.7	7.2	0.0	chr17	78254012	78254140	(5003301)	C	MER85	DNA/PiggyBac	(0)	139	1	1681497
206	23.5	0.0	1.9	chr17	78362748	78362799	(4894642)	+	MIRc	SINE/MIR	199	249	(19)	1681729
271	27.6	2.6	0.0	chr17	78362807	78362882	(4894559)	C	L2a	LINE/L2	(0)	3426	3349	1681734
757	25.1	7.1	1.1	chr17	78362985	78363192	(4894249)	+	MIR	SINE/MIR	46	261	(1)	1681735
196	33.3	3.3	16.4	chr17	78433212	78433419	(4824022)	C	MIRb	SINE/MIR	(79)	189	10	1681838
382	30.5	0.9	0.1	chr17	78477867	78478929	(4778512)	+	(ACC)n	Simple_repeat	1	1073	(0)	1681901
1688	17.1	5.8	3.0	chr17	78573210	78573315	(4684126)	+	MLT1B	LTR/ERVL-MaLR	1	110	(280)	1682050
17	12.3	6.5	2.0	chr17	78884099	78884144	(4373297)	+	(GAGCAG)n	Simple_repeat	1	49	(0)	1682626
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
12	11.2	6.7	0.0	chr17	79840824	79840853	(3416588)	+	(AGAGCG)n	Simple_repeat	1	32	(0)	1684016
12	8.2	0.0	9.4	chr17	79844190	79844221	(3413220)	+	(CTGGC)n	Simple_repeat	1	32	(0)	1684018
267	24.8	3.8	1.0	chr17	80203420	80203521	(3053920)	C	MER5A1	DNA/hAT-Charlie	(61)	105	1	1684657
245	25.7	1.3	1.3	chr17	80203564	80203638	(3053803)	+	MER5B	DNA/hAT-Charlie	63	137	(41)	1684658
17	15.9	0.0	0.0	chr17	80220323	80220357	(3037084)	+	(GGCTCG)n	Simple_repeat	1	35	(0)	1684680
16	21.4	0.0	8.6	chr17	80220366	80220435	(3037006)	+	(CCCGC)n	Simple_repeat	1	70	(0)	1684681
754	24.1	1.9	4.1	chr17	80514029	80514249	(2743192)	C	MLT2C1	LTR/ERVL	(1)	396	181	1685126
12	22.6	4.2	2.0	chr17	81393862	81393909	(1863532)	+	(GGCC)n	Simple_repeat	1	50	(0)	1686225
512	29.7	13.9	0.7	chr17	81520547	81520970	(1736471)	C	HAL1	LINE/L1	(848)	1659	1171	1686360
16	38.5	0.0	1.4	chr17	81647725	81647798	(1609643)	+	(GT)n	Simple_repeat	1	74	(0)	1686572
8206	4.9	2.1	0.6	chr17	81675758	81676749	(1580692)	+	LTR13	LTR/ERVK	1	1007	(0)	1686635
2076	11.3	2.6	1.0	chr17	81702128	81702427	(1555014)	C	AluSx1	SINE/Alu	(7)	305	1	1686663
2097	16.5	13.3	2.3	chr17	81732291	81732718	(1524723)	+	MER51E	LTR/ERV1	1	482	(0)	1686718
261	11.1	0.0	0.0	chr17	81976561	81976605	(1280836)	+	Alu	SINE/Alu	2	46	(87)	1687001
2087	9.7	0.7	9.1	chr17	81982803	81983142	(1274299)	C	AluSq	SINE/Alu	(0)	313	3	1687013
13	19.4	0.0	2.7	chr17	82034700	82034736	(1222705)	+	G-rich	Low_complexity	1	37	(0)	1687062
1997	19.2	3.7	8.2	chr17	82174354	82174999	(1082442)	+	LTR6A	LTR/ERV1	1	564	(0)	1687269
13	0.0	0.0	0.0	chr17	82458441	82458457	(798984)	+	(GCC)n	Simple_repeat	1	17	(0)	1687667
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
2487	19.3	6.2	2.6	chr17	82667951	82668910	(588531)	C	MER52D	LTR/ERV1	(586)	1537	1	1688057
744	22.6	8.5	0.0	chr17	82715902	82716105	(541336)	C	Ricksha_c	DNA/MULE-MuDR	(1142)	906	684	1688135
283	18.9	1.3	2.6	chr17	82716094	82716169	(541272)	C	Ricksha_c	DNA/MULE-MuDR	(1613)	435	361	1688135
61	24.2	1.3	10.3	chr17	82750769	82751153	(506288)	+	(CCCTTC)n	Simple_repeat	1	390	(0)	1688194
4545	11.8	6.5	1.8	chr17	82754907	82755749	(501692)	C	MER4D1	LTR/ERV1	(72)	828	1	1688199
256	27.1	19.4	0.0	chr17	83122914	83123046	(134395)	+	L1MC5a	LINE/L1	1725	1889	(888)	1688586
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
18	17.1	4.3	0.0	chr18	907721	907767	(79465518)	+	(CGCCGCG)n	Simple_repeat	1	49	(0)	1690705
1000	18.2	1.1	0.0	chr18	3967385	3967571	(76405714)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1695342
284	26.6	5.8	0.9	chr18	4237541	4237654	(76135631)	+	MLT1N2	LTR/ERVL-MaLR	414	533	(29)	1695727
681	25.2	13.5	2.1	chr18	4854289	4854636	(75518649)	C	LTR50	LTR/ERVL	(24)	771	298	1696505
799	22.6	4.1	2.8	chr18	4854652	4854869	(75518416)	C	LTR50	LTR/ERVL	(573)	222	2	1696505
232	27.3	17.1	7.9	chr18	5103025	5103251	(75270034)	+	MLT1K	LTR/ERVL-MaLR	13	264	(331)	1696809
2927	17.2	5.5	1.2	chr18	5103277	5103836	(75269449)	+	MER34A1	LTR/ERV1	3	587	(0)	1696810
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
2193	25.3	10.4	6.4	chr18	6100306	6101422	(74271863)	C	L1MDa	LINE/L1	(5277)	1356	15	1698108
4644	25.8	4.2	2.8	chr18	7220927	7221730	(73151555)	C	L1MA6	LINE/L1	(4983)	2582	1794	1699734
264	26.7	8.4	3.0	chr18	7221777	7221911	(73151374)	C	L1M3a	LINE/L1	(5175)	780	638	1699742
196	27.6	2.2	10.3	chr18	9366179	9366275	(71007010)	C	Penelope1_Vert	LINE/Penelope	(238)	849	761	1702898
276	30.6	9.7	0.0	chr18	9615348	9615468	(70757817)	+	MIRb	SINE/MIR	135	268	(0)	1703336
13	17.4	7.1	3.3	chr18	9913872	9913927	(70459358)	+	(GCGCAGC)n	Simple_repeat	1	60	(0)	1703863
15	20.9	1.6	6.3	chr18	9914178	9914239	(70459046)	+	(GCCGCC)n	Simple_repeat	1	63	(0)	1703864
37	23.7	1.1	8.9	chr18	11981285	11981472	(68391813)	+	G-rich	Low_complexity	1	190	(0)	1706731
323	30.4	11.3	7.6	chr18	12645836	12645930	(67727355)	+	L2c	LINE/L2	2910	2993	(394)	1707839
607	29.9	3.0	0.5	chr18	12645931	12646122	(67727163)	+	MER117	DNA/hAT-Charlie	1	197	(0)	1707840
32	11.8	0.0	1.8	chr18	12658110	12658166	(67715119)	+	(CGCCC)n	Simple_repeat	1	57	(0)	1707865
14	24.6	1.4	6.9	chr18	12658378	12658448	(67714837)	+	(GCGG)n	Simple_repeat	1	72	(0)	1707866
10921	9.6	0.6	7.5	chr18	12775722	12777416	(67595869)	C	LTR12C	LTR/ERV1	(0)	1579	3	1708112
17	0.0	0.0	0.0	chr18	12883871	12883889	(67489396)	+	(T)n	Simple_repeat	1	19	(0)	1708292
18	9.4	0.0	5.3	chr18	12883964	12884001	(67489284)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1708293
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
491	23.9	7.1	0.0	chr18	23106021	23106137	(57267148)	+	MIRb	SINE/MIR	22	147	(121)	1715620
805	16.5	11.9	2.9	chr18	23369020	23369194	(57004091)	+	MER53	DNA/hAT	1	193	(0)	1716056
12	20.8	0.0	2.9	chr18	23453660	23453694	(56919591)	+	G-rich	Low_complexity	1	35	(0)	1716230
20	20.5	3.6	0.0	chr18	23503782	23503837	(56869448)	+	(CCCGT)n	Simple_repeat	1	58	(0)	1716344
2490	7.7	0.0	0.0	chr18	23505885	23506183	(56867102)	+	AluSz	SINE/Alu	1	299	(13)	1716347
24	20.8	3.3	0.0	chr18	24014886	24014946	(56358339)	+	(GCG)n	Simple_repeat	1	63	(0)	1717219
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
521	33.1	4.5	4.8	chr18	24432151	24432289	(55940996)	C	L2a	LINE/L2	(599)	2820	2686	1717934
363	33.0	5.7	8.6	chr18	25329512	25329872	(55043413)	C	L2	LINE/L2	(359)	3060	2711	1719183
59	13.5	5.7	4.2	chr18	25352287	25352445	(55020840)	+	(GCC)n	Simple_repeat	1	168	(0)	1719217
1287	27.7	7.6	4.2	chr18	25503363	25503935	(54869350)	C	MLT2F	LTR/ERVL	(69)	594	1	1719422
51	2.1	0.0	0.0	chr18	26550558	26550605	(53822680)	+	(AC)n	Simple_repeat	1	48	(0)	1721102
378	30.2	3.1	3.1	chr18	26685708	26685837	(53687448)	+	Eulor12	DNA?	49	178	(6)	1721351
15	9.7	6.1	0.0	chr18	28175585	28175617	(52197668)	+	(CCAGCC)n	Simple_repeat	1	35	(0)	1723414
24	22.9	2.7	1.3	chr18	28176821	28176893	(52196392)	+	(GCGGC)n	Simple_repeat	1	75	(0)	1723415
15	17.1	2.4	2.4	chr18	28176906	28176946	(52196339)	+	(CCCCG)n	Simple_repeat	1	42	(0)	1723416
15	14.7	6.2	2.0	chr18	28177023	28177057	(52196228)	+	GA-rich	Low_complexity	1	37	(0)	1723417
28	0.0	0.0	0.0	chr18	28177058	28177083	(52196202)	+	(GGC)n	Simple_repeat	1	26	(0)	1723418
15	14.7	6.2	2.0	chr18	28177084	28177095	(52196190)	+	GA-rich	Low_complexity	38	49	(0)	1723419
12	30.1	0.0	3.5	chr18	28177146	28177202	(52196083)	+	(CCCCGCT)n	Simple_repeat	1	57	(0)	1723420
28	9.8	0.0	0.0	chr18	32772085	32772128	(47601157)	+	(CCCG)n	Simple_repeat	1	44	(0)	1729866
17	30.3	0.0	3.5	chr18	34341859	34341916	(46031369)	+	(AT)n	Simple_repeat	1	58	(0)	1731806
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
665	16.5	7.6	1.2	chr18	35289777	35289936	(45083349)	+	MER5A	DNA/hAT-Charlie	1	171	(18)	1733112
1042	25.9	1.2	0.0	chr18	35755810	35756052	(44617233)	+	L1MA4	LINE/L1	25	270	(6277)	1733774
1180	26.6	2.9	1.5	chr18	35756063	35756405	(44616880)	C	HERVL40-int	LTR/ERVL	(2104)	3426	3079	1733775
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
2031	13.5	0.0	0.0	chr18	36266163	36266429	(44106856)	C	AluSz6	SINE/Alu	(39)	273	7	1734564
2163	23.3	8.7	6.2	chr18	37084856	37085583	(43287702)	C	L1M3e	LINE/L1	(6282)	748	1	1735599
1359	11.7	7.0	0.5	chr18	37166326	37166540	(43206745)	+	MER30	DNA/hAT-Charlie	1	230	(0)	1735694
1236	28.1	5.9	4.0	chr18	37166541	37166848	(43206437)	+	L1MB4	LINE/L1	226	539	(6068)	1735693
12	0.0	0.0	8.3	chr18	38330478	38330501	(42042784)	+	(GGAA)n	Simple_repeat	1	24	(0)	1737241
1291	18.4	10.0	1.5	chr18	39458444	39458708	(40914577)	+	MSTA	LTR/ERVL-MaLR	1	290	(138)	1738716
57	33.0	2.6	0.8	chr18	44742937	44743168	(35630117)	+	(CTCT)n	Simple_repeat	1	238	(0)	1745895
31	7.5	0.0	0.0	chr18	44836481	44836523	(35536762)	+	(CTCCA)n	Simple_repeat	1	43	(0)	1746028
13	16.8	0.0	5.4	chr18	45837920	45837956	(34535329)	+	(CCCG)n	Simple_repeat	1	37	(0)	1747505
1381	29.2	3.9	1.1	chr18	46324475	46324944	(34048341)	C	MLT1J	LTR/ERVL-MaLR	(28)	484	1	1748454
253	29.4	10.5	2.9	chr18	46392966	46393070	(33980215)	C	MIR3	SINE/MIR	(27)	181	68	1748577
205	18.6	0.3	0.0	chr18	46546273	46546655	(33826630)	+	(CATTC)n	Satellite	1	384	(0)	1748842
2586	4.8	0.0	1.9	chr18	46757180	46757489	(33615796)	+	AluSx4	SINE/Alu	1	304	(6)	1749204
17	25.6	0.0	6.8	chr18	47261133	47261206	(33112079)	+	(CCG)n	Simple_repeat	1	74	(0)	1749911
12	12.4	8.6	0.0	chr18	47264041	47264075	(33109210)	+	G-rich	Low_complexity	1	38	(0)	1749914
445	22.3	4.3	1.8	chr18	47449437	47449550	(32923735)	+	MER94	DNA/hAT-Blackjack	18	134	(0)	1750215
16	14.4	2.5	2.4	chr18	47930512	47930556	(32442729)	+	G-rich	Low_complexity	1	45	(0)	1751013
17	16.3	2.3	2.3	chr18	48827986	48828031	(31545254)	+	(CCCACC)n	Simple_repeat	1	46	(0)	1752500
339	28.0	3.6	2.2	chr18	49459222	49459356	(30913929)	+	MIRc	SINE/MIR	70	206	(62)	1753564
2359	11.1	0.0	0.0	chr18	49699028	49699333	(30673952)	C	AluSx	SINE/Alu	(6)	306	1	1754066
238	25.6	10.7	10.7	chr18	49699546	49699676	(30673609)	+	L2c	LINE/L2	3244	3374	(1)	1754065
2725	13.7	4.2	0.0	chr18	50183673	50184110	(30189175)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	1754737
7318	13.0	4.9	2.3	chr18	50191695	50192933	(30180352)	+	HSMAR2	DNA/TcMar-Mariner	16	1288	(14)	1754751
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
14	11.5	0.0	3.3	chr18	51029856	51029885	(29343400)	+	(CAAAA)n	Simple_repeat	1	30	(0)	1756242
483	28.0	16.9	2.3	chr18	51363952	51364167	(29009118)	C	MIR	SINE/MIR	(1)	261	8	1756842
880	19.5	2.3	0.0	chr18	51364217	51364385	(29008900)	C	MER5A	DNA/hAT-Charlie	(13)	176	4	1756843
412	24.4	9.8	6.4	chr18	51625595	51625782	(28747503)	C	LTR33A_	LTR/ERVL	(591)	204	10	1757288
207	33.3	13.0	1.4	chr18	51625784	51625993	(28747292)	C	L3	LINE/CR1	(467)	3632	3395	1757287
14	26.0	0.0	0.0	chr18	54269571	54269611	(26103674)	+	(GAC)n	Simple_repeat	1	41	(0)	1761009
15985	9.5	0.9	3.1	chr18	56415886	56419012	(23954273)	+	HERVH-int	LTR/ERV1	1	2995	(4718)	1764063
12	20.4	2.4	2.4	chr18	57803069	57803109	(22570176)	+	(GCCGCC)n	Simple_repeat	1	42	(0)	1766211
272	34.3	2.8	4.2	chr18	58442871	58443013	(21930272)	C	MIRc	SINE/MIR	(105)	163	23	1767258
1384	16.7	0.4	8.8	chr18	58642128	58642422	(21730863)	C	HERVH-int	LTR/ERV1	(1697)	6016	5747	1767590
7235	12.1	0.9	5.7	chr18	58642423	58643583	(21729702)	C	HERVH-int	LTR/ERV1	(2803)	4910	3806	1767590
209	33.7	2.1	0.0	chr18	58658227	58658321	(21714964)	+	X7A_LINE	LINE/CR1	41	137	(130)	1767611
723	18.4	2.2	10.9	chr18	58658350	58658485	(21714800)	C	MER5A	DNA/hAT-Charlie	(5)	184	58	1767612
2374	9.9	0.0	0.3	chr18	58658486	58658789	(21714496)	C	AluSz	SINE/Alu	(9)	303	1	1767613
2548	6.2	0.7	0.3	chr18	58806582	58806886	(21566399)	C	AluY	SINE/Alu	(5)	306	1	1767898
2645	22.1	0.2	2.3	chr18	58806887	58807442	(21565843)	+	MER74A	LTR/ERVL	15	558	(0)	1767899
17	29.4	3.3	2.1	chr18	58863776	58863865	(21509420)	+	G-rich	Low_complexity	1	93	(0)	1768037
1745	17.7	2.5	0.6	chr18	59090291	59090603	(21282682)	C	MLT1C	LTR/ERVL-MaLR	(148)	319	1	1768437
19	4.3	0.0	0.0	chr18	59269716	59269739	(21103546)	+	(CT)n	Simple_repeat	1	24	(0)	1768701
14	8.2	3.9	0.0	chr18	59275736	59275761	(21097524)	+	(CCT)n	Simple_repeat	1	27	(0)	1768705
17	0.0	0.0	0.0	chr18	59308542	59308560	(21064725)	+	(T)n	Simple_repeat	1	19	(0)	1768761
1622	16.1	6.3	0.4	chr18	62027746	62027936	(18345349)	+	AluJb	SINE/Alu	105	312	(0)	1772831
208	32.9	2.1	1.8	chr18	62186367	62186485	(18186800)	+	MIR3	SINE/MIR	108	232	(36)	1773093
13	23.4	1.5	7.6	chr18	62610974	62611038	(17762247)	+	GA-rich	Low_complexity	1	66	(0)	1773714
632	27.2	13.7	4.6	chr18	62760068	62760371	(17612914)	+	MER102b	DNA/hAT-Charlie	3	338	(3)	1773995
383	29.0	12.4	3.1	chr18	62760459	62760618	(17612667)	+	MIRb	SINE/MIR	7	183	(85)	1773996
588	10.8	2.4	0.0	chr18	63022788	63022870	(17350415)	C	AluJo	SINE/Alu	(227)	85	1	1774423
1203	20.9	0.8	4.1	chr18	63022871	63023140	(17350145)	C	L1MB4	LINE/L1	(348)	5832	5572	1774424
641	18.2	15.0	0.6	chr18	63063217	63063376	(17309909)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	1774493
403	28.4	0.8	8.3	chr18	63063453	63063659	(17309626)	+	L2a	LINE/L2	3022	3212	(214)	1774488
43	4.2	2.0	0.0	chr18	63320691	63320739	(17052546)	+	(GT)n	Simple_repeat	1	50	(0)	1774870
949	30.6	5.2	3.0	chr18	64332126	64332522	(16040763)	+	LTR16C	LTR/ERVL	74	479	(10)	1776338
1375	22.6	10.1	6.3	chr18	65257046	65257508	(15115777)	+	MER67D	LTR/ERV1	1	483	(31)	1777501
814	10.9	16.5	0.0	chr18	69663289	69663435	(10709850)	+	L1PA13	LINE/L1	5988	6163	(0)	1783497
450	20.6	13.0	5.3	chr18	77870507	77870619	(2502666)	+	MER63B	DNA/hAT-Blackjack	314	436	(0)	1793997
12	16.3	2.8	2.7	chr18	80108183	80108218	(265067)	+	(GGCTGGC)n	Simple_repeat	1	37	(0)	1796147
16	22.3	5.6	2.7	chr18	80108352	80108422	(264863)	+	(GTTCAG)n	Simple_repeat	1	75	(0)	1796148
284	35.4	9.3	0.8	chr18	80113633	80113760	(259525)	C	L2b	LINE/L2	(18)	3357	3218	1796153
19	21.2	0.0	2.0	chr19	344397	344447	(58273169)	+	G-rich	Low_complexity	1	51	(0)	1796769
25	14.5	0.0	8.3	chr19	344462	344533	(58273083)	+	(CCCCG)n	Simple_repeat	1	72	(0)	1796770
2261	10.6	1.3	0.0	chr19	347668	347969	(58269647)	C	AluY	SINE/Alu	(5)	306	1	1796781
292	30.0	4.1	2.1	chr19	348296	348438	(58269178)	+	ERV3-16A3_I-int	LTR/ERVL	5027	5172	(54)	1796782
2354	7.5	1.7	0.0	chr19	495852	496146	(58121470)	+	AluSp	SINE/Alu	1	300	(13)	1797026
2219	10.1	0.0	1.4	chr19	770560	770855	(57846761)	+	AluSz	SINE/Alu	1	292	(20)	1797564
2029	11.0	5.4	0.0	chr19	778660	778941	(57838675)	+	AluSx	SINE/Alu	1	298	(14)	1797592
275	28.9	8.9	1.7	chr19	779238	779413	(57838203)	+	L1MB7	LINE/L1	5536	5725	(453)	1797593
12	21.8	0.0	4.9	chr19	861047	861087	(57756529)	+	(CCCCA)n	Simple_repeat	1	41	(0)	1797779
11	24.4	2.2	2.2	chr19	956453	956497	(57661119)	+	G-rich	Low_complexity	1	46	(0)	1797967
197	23.1	0.0	1.1	chr19	956751	956818	(57660798)	C	MIRb	SINE/MIR	(93)	175	104	1797968
1726	15.5	3.7	1.4	chr19	980894	981183	(57636433)	+	AluJr	SINE/Alu	1	297	(15)	1798023
2322	9.6	0.7	0.0	chr19	982301	982603	(57635013)	+	AluSx	SINE/Alu	1	305	(7)	1798028
23	20.5	6.2	1.2	chr19	1026576	1026655	(57590961)	+	(CCCGT)n	Simple_repeat	1	85	(0)	1798100
18	22.9	2.3	6.7	chr19	1026656	1026661	(57590955)	+	(GCCC)n	Simple_repeat	2	89	(0)	1798101
24	14.7	3.6	1.7	chr19	1072013	1072047	(57545569)	+	(TTTTC)n	Simple_repeat	1	37	(0)	1798173
2211	11.5	1.0	1.0	chr19	1072048	1072359	(57545257)	C	AluSz	SINE/Alu	(0)	312	1	1798174
13	23.5	0.0	0.0	chr19	1081493	1081527	(57536089)	+	G-rich	Low_complexity	1	35	(0)	1798196
17	8.4	7.9	0.0	chr19	1082038	1082075	(57535541)	+	(GGAGCT)n	Simple_repeat	1	41	(0)	1798197
15	20.8	4.0	6.4	chr19	1105092	1105166	(57512450)	+	(CCCGCT)n	Simple_repeat	1	78	(0)	1798233
550	31.0	13.1	0.6	chr19	1156470	1156835	(57460781)	+	L1MB8	LINE/L1	5576	5994	(184)	1798299
202	10.0	0.0	0.0	chr19	1180310	1180339	(57437277)	+	MIR1_Amn	SINE/MIR	119	148	(82)	1798338
211	24.1	0.0	6.9	chr19	1267426	1267483	(57350133)	+	L2c	LINE/L2	3334	3387	(0)	1798483
350	27.7	4.7	0.0	chr19	1406997	1407097	(57210519)	+	MIR	SINE/MIR	43	148	(114)	1798746
22	10.7	8.0	0.0	chr19	1407283	1407349	(57210267)	+	(CGCA)n	Simple_repeat	1	72	(0)	1798747
48	0.0	0.0	0.0	chr19	1407620	1407662	(57209954)	+	(GCC)n	Simple_repeat	1	43	(0)	1798748
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
247	15.2	6.9	2.8	chr19	1669504	1669539	(56948077)	+	(CTTCC)n	Simple_repeat	1	37	(0)	1799246
65	3.2	0.0	0.0	chr19	1669540	1669603	(56948013)	+	(CT)n	Simple_repeat	1	64	(0)	1799247
11	16.4	2.1	8.2	chr19	1748311	1748358	(56869258)	+	(GCCAG)n	Simple_repeat	1	49	(0)	1799453
214	26.2	2.1	2.2	chr19	1813101	1813179	(56804437)	C	L2c	LINE/L2	(1)	3386	3299	1799566
12	19.8	2.3	4.4	chr19	1853415	1853458	(56764158)	+	(AGGCC)n	Simple_repeat	1	45	(0)	1799628
54	34.4	1.4	0.0	chr19	2016250	2016457	(56601159)	+	(CCAGACC)n	Simple_repeat	1	211	(0)	1799948
13	16.5	2.2	6.4	chr19	2032506	2032564	(56585052)	+	G-rich	Low_complexity	1	56	(0)	1800006
975	21.1	10.7	0.5	chr19	2060604	2060997	(56556619)	+	MLT1D	LTR/ERVL-MaLR	71	505	(0)	1800056
545	31.5	7.0	3.6	chr19	2166851	2167248	(56450368)	C	L1MD2	LINE/L1	(350)	6009	5598	1800282
2413	9.4	0.0	0.0	chr19	2292478	2292785	(56324831)	C	AluSx1	SINE/Alu	(0)	312	5	1800477
717	29.7	4.3	4.0	chr19	2292788	2293061	(56324555)	+	L1MB7	LINE/L1	5632	5908	(276)	1800478
2465	8.0	0.0	0.0	chr19	2293062	2293363	(56324253)	C	AluY	SINE/Alu	(9)	302	1	1800479
1157	23.6	8.0	4.1	chr19	2304360	2304710	(56312906)	+	MLT1D	LTR/ERVL-MaLR	1	373	(132)	1800509
2011	10.6	3.6	0.7	chr19	2304711	2305008	(56312608)	C	AluSx3	SINE/Alu	(0)	311	1	1800510
13	9.9	2.6	7.7	chr19	2308185	2308222	(56309394)	+	(CCG)n	Simple_repeat	1	39	(0)	1800516
1015	10.4	0.7	0.0	chr19	2320389	2320523	(56297093)	+	AluSz	SINE/Alu	1	136	(176)	1800553
210	30.4	0.1	6.1	chr19	2329096	2329216	(56288400)	+	MIR1_Amn	SINE/MIR	69	182	(80)	1800572
233	33.3	2.0	0.0	chr19	2462447	2462542	(56155074)	C	MIR	SINE/MIR	(118)	144	47	1800845
24	6.8	0.0	0.0	chr19	2494353	2494383	(56123233)	+	(TG)n	Simple_repeat	1	31	(0)	1800933
12	18.3	0.0	3.0	chr19	2579335	2579367	(56038249)	+	G-rich	Low_complexity	1	33	(0)	1801150
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
1009	27.4	9.9	0.0	chr19	2809075	2809480	(55808136)	C	Tigger17a	DNA/TcMar-Tigger	(115)	539	174	1801696
842	27.7	15.1	4.2	chr19	2983201	2983942	(55633674)	C	L2a	LINE/L2	(2)	3424	2570	1802087
1895	11.2	3.2	1.8	chr19	3103985	3104118	(55513498)	C	AluSx1	SINE/Alu	(178)	134	2	1802418
416	23.9	3.9	1.4	chr19	3244226	3245438	(55372178)	+	(TG)n	Simple_repeat	1	1260	(0)	1802728
13	19.1	0.0	6.4	chr19	3320396	3320442	(55297174)	+	(CCCCGGC)n	Simple_repeat	1	47	(0)	1802921
495	28.9	2.5	1.2	chr19	3320612	3320772	(55296844)	C	MIR	SINE/MIR	(88)	174	12	1802922
13	17.1	0.0	8.5	chr19	3367228	3367274	(55250342)	+	G-rich	Low_complexity	1	47	(0)	1803069
32	0.0	0.0	0.0	chr19	3367348	3367377	(55250239)	+	(GATTCTG)n	Simple_repeat	1	30	(0)	1803070
27	0.0	0.0	0.0	chr19	3367473	3367498	(55250118)	+	(CCCCTC)n	Simple_repeat	1	26	(0)	1803071
199	26.4	10.8	4.2	chr19	3405396	3405490	(55212126)	C	MIRc	SINE/MIR	(99)	169	68	1803180
346	20.4	10.6	0.0	chr19	3434692	3434784	(55182832)	+	MIRb	SINE/MIR	87	190	(78)	1803275
211	39.3	3.9	0.0	chr19	3434802	3434923	(55182693)	+	MIR3	SINE/MIR	38	164	(44)	1803276
1212	12.7	13.5	3.3	chr19	3518281	3518341	(55099275)	C	AluJo	SINE/Alu	(181)	131	71	1803467
1007	16.1	0.6	1.2	chr19	3518716	3518876	(55098740)	+	AluJb	SINE/Alu	134	293	(19)	1803469
13	12.5	0.0	0.0	chr19	3578120	3578145	(55039471)	+	(GCGGG)n	Simple_repeat	1	26	(0)	1803570
342	28.3	11.8	5.1	chr19	3725771	3725967	(54891649)	C	MIRb	SINE/MIR	(56)	212	1	1803892
18	30.6	3.9	1.9	chr19	3868848	3868950	(54748666)	+	(GGCTGG)n	Simple_repeat	1	107	(0)	1804194
22	27.1	1.1	4.2	chr19	3869029	3869056	(54748560)	+	(CCCCGCG)n	Simple_repeat	1	75	(21)	1804195
13	26.1	4.9	1.6	chr19	3869057	3869117	(54748499)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1804196
22	27.1	1.1	4.2	chr19	3869118	3869123	(54748493)	+	(CCCCGCG)n	Simple_repeat	76	96	(0)	1804195
2182	10.1	3.4	0.0	chr19	3876761	3877047	(54740569)	+	AluSx1	SINE/Alu	1	297	(15)	1804223
251	28.4	0.8	0.3	chr19	4197343	4198009	(54419607)	+	(AATG)n	Simple_repeat	1	672	(0)	1805012
522	31.6	5.3	0.6	chr19	4335681	4335858	(54281758)	+	MIR	SINE/MIR	64	250	(12)	1805382
397	31.1	3.2	0.0	chr19	4335880	4336001	(54281615)	C	MIRb	SINE/MIR	(115)	153	28	1805383
2241	10.9	0.3	1.0	chr19	4336002	4336314	(54281302)	C	AluSz	SINE/Alu	(1)	311	1	1805384
14	19.6	2.7	0.0	chr19	4523613	4523649	(54093967)	+	(CCCATC)n	Simple_repeat	1	38	(0)	1805776
317	36.3	4.5	6.8	chr19	4577162	4577454	(54040162)	+	L2b	LINE/L2	3088	3373	(2)	1805912
1272	25.1	16.6	2.2	chr19	4988575	4989057	(53628559)	C	MER21B	LTR/ERVL	(314)	554	2	1807033
477	23.4	6.6	0.0	chr19	5113623	5113763	(53503853)	C	MER20	DNA/hAT-Charlie	(35)	184	34	1807216
12	20.8	1.7	8.3	chr19	5137860	5137918	(53479698)	+	(CCCAG)n	Simple_repeat	1	60	(0)	1807235
18	27.3	0.0	3.1	chr19	5340835	5340899	(53276717)	+	(CCG)n	Simple_repeat	1	65	(0)	1807706
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
2261	13.4	0.0	0.6	chr19	5403722	5404035	(53213581)	+	AluSx	SINE/Alu	1	312	(0)	1807888
16	3.2	5.6	5.3	chr19	5404039	5404104	(53213512)	+	(AAAGA)n	Simple_repeat	1	66	(0)	1807889
22	28.0	4.7	0.0	chr19	5404105	5404120	(53213496)	+	GA-rich	Low_complexity	4	89	(0)	1807890
2509	5.3	0.0	0.3	chr19	5559333	5559634	(53057982)	C	AluY	SINE/Alu	(10)	301	1	1808352
288	31.2	9.4	0.0	chr19	5689973	5690068	(52927548)	C	MIR	SINE/MIR	(108)	154	49	1808598
1865	16.8	2.0	0.0	chr19	5791398	5791695	(52825921)	C	AluJr	SINE/Alu	(8)	304	1	1808845
361	22.7	13.1	0.2	chr19	5803483	5803618	(52813998)	C	MIR	SINE/MIR	(15)	253	81	1808886
2327	11.5	0.0	0.3	chr19	5823135	5823446	(52794170)	+	AluSx1	SINE/Alu	1	311	(1)	1808944
181	29.7	10.8	0.0	chr19	5823450	5823523	(52794093)	C	L2b	LINE/L2	(279)	3108	3026	1808941
722	25.9	3.7	0.8	chr19	5823729	5823966	(52793650)	+	L2b	LINE/L2	2937	3181	(194)	1808945
2484	8.4	0.0	0.0	chr19	5947032	5947371	(52670245)	+	AluSx	SINE/Alu	1	312	(0)	1809166
12	5.9	10.3	4.7	chr19	6516896	6516934	(52100682)	+	(TCCCGCTC)n	Simple_repeat	1	43	(0)	1810457
20	3.4	0.0	5.9	chr19	6531138	6531171	(52086445)	+	(GCT)n	Simple_repeat	1	34	(0)	1810499
31	8.3	2.0	0.0	chr19	7197322	7197372	(51420244)	+	(GAGT)n	Simple_repeat	1	52	(0)	1812249
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
1599	20.5	0.4	0.0	chr19	7211079	7211351	(51406265)	C	AluJr	SINE/Alu	(23)	289	16	1812292
2148	11.1	0.0	0.3	chr19	7292093	7292389	(51325227)	C	AluSc	SINE/Alu	(13)	296	1	1812532
183	18.9	0.0	0.0	chr19	7292420	7292456	(51325160)	C	MIRb	SINE/MIR	(9)	259	223	1812533
13	11.4	0.0	6.2	chr19	7292460	7292491	(51325125)	+	G-rich	Low_complexity	1	32	(0)	1812534
22	30.0	2.2	1.1	chr19	7294260	7294288	(51323328)	+	G-rich	Low_complexity	1	54	(39)	1812537
14	14.7	0.0	7.0	chr19	7294289	7294331	(51323285)	+	(GGCGGCG)n	Simple_repeat	1	43	(0)	1812538
22	30.0	2.2	1.1	chr19	7294332	7294350	(51323266)	+	G-rich	Low_complexity	55	93	(0)	1812537
14	15.8	2.7	2.6	chr19	7294486	7294522	(51323094)	+	(CCGC)n	Simple_repeat	1	38	(0)	1812539
189	27.4	0.0	11.6	chr19	7533217	7533311	(51084305)	C	L2a	LINE/L2	(6)	3420	3337	1813157
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
18	22.0	4.6	1.5	chr19	7670104	7670168	(50947448)	+	(CCGTCC)n	Simple_repeat	1	68	(0)	1813459
34	0.0	0.0	0.0	chr19	7670433	7670463	(50947153)	+	(GAT)n	Simple_repeat	1	31	(0)	1813460
2376	7.1	0.0	1.0	chr19	7839021	7839317	(50778299)	+	AluY	SINE/Alu	1	294	(17)	1813844
184	27.1	18.1	3.2	chr19	7839332	7839457	(50778159)	C	L2c	LINE/L2	(296)	3079	2931	1813842
12	16.4	5.9	0.0	chr19	7869916	7869949	(50747667)	+	(GGC)n	Simple_repeat	1	36	(0)	1813880
18	19.5	2.0	2.0	chr19	7903905	7903953	(50713663)	+	(GGC)n	Simple_repeat	1	50	(0)	1813951
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
2217	10.7	0.0	3.6	chr19	8152240	8152373	(50465243)	+	AluSc8	SINE/Alu	1	134	(177)	1814519
242	19.4	1.9	0.7	chr19	8210939	8211000	(50406616)	+	MIRc	SINE/MIR	114	177	(91)	1814710
256	28.3	4.0	0.0	chr19	8212206	8212350	(50405266)	C	L2b	LINE/L2	(639)	2780	2630	1814713
2386	9.0	0.0	2.8	chr19	8212626	8212947	(50404669)	C	AluSq2	SINE/Alu	(0)	313	1	1814714
1502	9.4	19.9	0.0	chr19	8317289	8317522	(50300094)	+	AluSx1	SINE/Alu	5	296	(16)	1815003
521	28.3	5.8	4.6	chr19	8335912	8336154	(50281462)	C	L2b	LINE/L2	(4)	3422	3113	1815050
2458	8.9	0.0	1.3	chr19	8530758	8531072	(50086544)	+	AluSq2	SINE/Alu	1	311	(2)	1815496
2421	9.6	0.0	0.0	chr19	8564099	8564400	(50053216)	+	AluSq2	SINE/Alu	1	302	(11)	1815596
13	15.8	2.7	2.6	chr19	9819587	9819623	(48797993)	+	(GGCGG)n	Simple_repeat	1	38	(0)	1818191
447	33.9	7.4	5.6	chr19	9962415	9962733	(48654883)	+	L2c	LINE/L2	3002	3326	(61)	1818576
858	22.5	6.6	1.8	chr19	9962989	9963205	(48654411)	+	LTR16C	LTR/ERVL	105	332	(157)	1818577
481	27.7	7.8	7.5	chr19	10095592	10095923	(48521693)	C	MER46C	DNA/TcMar-Tigger	(0)	338	6	1818888
13	11.1	3.2	3.1	chr19	10096519	10096549	(48521067)	+	(CAG)n	Simple_repeat	1	32	(0)	1818889
1915	12.6	0.0	7.5	chr19	10503658	10503991	(48113625)	C	AluJr	SINE/Alu	(1)	311	3	1819921
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
238	29.2	0.0	1.4	chr19	10881297	10881369	(47736247)	+	Charlie4z	DNA/hAT-Charlie	84	155	(12)	1820915
229	29.6	6.7	0.0	chr19	10881494	10881618	(47735998)	C	L2	LINE/L2	(1321)	2098	1965	1820916
258	37.1	0.0	2.2	chr19	10881810	10881900	(47735716)	C	L2a	LINE/L2	(10)	3416	3328	1820917
14	24.0	0.0	0.0	chr19	11380923	11380961	(47236655)	+	(AGGATG)n	Simple_repeat	1	39	(0)	1822181
1540	24.4	8.8	2.9	chr19	11390949	11391404	(47226212)	C	MLT1J	LTR/ERVL-MaLR	(19)	493	8	1822211
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
52	11.9	0.0	0.0	chr19	11640511	11640595	(46977021)	+	(TA)n	Simple_repeat	1	85	(0)	1822848
2375	8.9	0.0	0.7	chr19	11886864	11887167	(46730449)	+	AluSz	SINE/Alu	1	302	(10)	1823323
2581	6.8	0.0	0.0	chr19	11924151	11924461	(46693155)	+	AluY	SINE/Alu	1	311	(0)	1823398
12	9.7	0.0	0.0	chr19	12334256	12334277	(46283339)	+	(AATG)n	Simple_repeat	1	22	(0)	1824254
2515	7.5	0.0	0.0	chr19	12334587	12334894	(46282722)	+	AluSx1	SINE/Alu	1	308	(4)	1824255
1027	23.6	10.1	2.8	chr19	12364759	12365233	(46252383)	+	LTR26E	LTR/ERV1	24	622	(0)	1824315
11	19.6	12.5	0.0	chr19	12657363	12657426	(45960190)	+	(CCTGTCC)n	Simple_repeat	1	72	(0)	1824940
2623	4.5	1.0	0.0	chr19	12657677	12657984	(45959632)	+	AluY	SINE/Alu	1	311	(0)	1824941
14	8.9	0.0	0.0	chr19	12766556	12766579	(45851037)	+	(GTTT)n	Simple_repeat	1	24	(0)	1825172
2538	6.3	0.0	0.0	chr19	12766582	12766882	(45850734)	C	AluSc8	SINE/Alu	(10)	301	1	1825173
12	20.1	2.9	0.0	chr19	12769866	12769899	(45847717)	+	(CCG)n	Simple_repeat	1	35	(0)	1825181
444	31.6	1.3	3.8	chr19	12777855	12778012	(45839604)	C	MIRb	SINE/MIR	(0)	268	115	1825195
189	30.8	20.4	0.6	chr19	12796429	12796585	(45821031)	C	MIRb	SINE/MIR	(56)	212	17	1825226
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
16	29.8	1.6	0.0	chr19	12806495	12806555	(45811061)	+	(GCAGCG)n	Simple_repeat	1	62	(0)	1825249
17	13.3	0.0	0.0	chr19	12825712	12825744	(45791872)	+	(GCCGCT)n	Simple_repeat	1	33	(0)	1825310
33	3.1	0.0	0.0	chr19	12830839	12830871	(45786745)	+	(GT)n	Simple_repeat	1	33	(0)	1825320
219	36.2	10.5	1.3	chr19	13132831	13132986	(45484630)	C	MIR1_Amn	SINE/MIR	(100)	168	4	1825950
435	7.9	0.0	0.0	chr19	13133319	13133381	(45484235)	+	Alu	SINE/Alu	245	307	(4)	1825951
1479	16.6	0.0	1.3	chr19	13639252	13639486	(44978130)	C	AluJb	SINE/Alu	(80)	232	1	1827352
485	17.5	0.0	0.0	chr19	13639489	13639568	(44978048)	+	LTR43B	LTR/ERV1	493	572	(0)	1827353
312	29.2	6.8	0.0	chr19	13765177	13765347	(44852269)	C	MIR	SINE/MIR	(117)	151	16	1827734
1394	10.5	0.0	2.6	chr19	13804497	13804660	(44812956)	+	AluSx3	SINE/Alu	132	295	(16)	1827846
2206	11.7	0.0	0.0	chr19	14055918	14056208	(44561408)	C	AluSz	SINE/Alu	(21)	291	1	1828463
366	24.3	3.6	2.7	chr19	14056214	14056323	(44561293)	C	MIRb	SINE/MIR	(107)	161	51	1828464
12	21.6	0.0	0.0	chr19	14136479	14136510	(44481106)	+	G-rich	Low_complexity	1	32	(0)	1828671
11	21.0	2.5	2.4	chr19	14183849	14183888	(44433728)	+	(CACCCCA)n	Simple_repeat	1	41	(0)	1828768
62	14.5	0.0	0.0	chr19	14204663	14204768	(44412848)	+	(AGAG)n	Simple_repeat	1	106	(0)	1828818
199	40.9	2.8	5.5	chr19	14208903	14209047	(44408569)	+	MIR1_Amn	SINE/MIR	7	147	(83)	1828822
690	25.6	0.6	2.4	chr19	14320541	14320704	(44296912)	C	MER63A	DNA/hAT-Blackjack	(45)	165	5	1829175
13	18.2	2.6	2.5	chr19	14393492	14393530	(44224086)	+	G-rich	Low_complexity	1	40	(0)	1829396
30	14.1	2.6	5.0	chr19	15107324	15107429	(43510187)	+	G-rich	Low_complexity	1	103	(0)	1831135
16	23.5	1.9	1.9	chr19	15200202	15200254	(43417362)	+	G-rich	Low_complexity	1	53	(0)	1831351
16	20.9	2.3	0.0	chr19	15200242	15200285	(43417331)	+	(GGCTCC)n	Simple_repeat	1	45	(0)	1831352
277	37.8	7.1	4.3	chr19	15222462	15222680	(43394936)	+	L2a	LINE/L2	2168	2394	(1025)	1831417
213	23.2	7.9	5.8	chr19	15222997	15223083	(43394533)	+	L2c	LINE/L2	3108	3196	(191)	1831420
14	5.0	0.0	0.0	chr19	15223174	15223194	(43394422)	+	(ATGA)n	Simple_repeat	1	21	(0)	1831421
229	16.7	0.0	0.0	chr19	15223195	15223230	(43394386)	C	tRNA-Gly-GGG	tRNA	(38)	36	1	1831422
38	0.0	0.0	0.0	chr19	15223242	15223276	(43394340)	+	(TGAG)n	Simple_repeat	1	35	(0)	1831423
3993	8.4	3.2	0.4	chr19	16824709	16825246	(41792370)	+	MER41A	LTR/ERV1	1	554	(0)	1834904
767	31.2	7.5	0.9	chr19	16825339	16825687	(41791929)	+	L2b	LINE/L2	2612	2985	(434)	1834905
47	0.0	0.0	0.0	chr19	17246433	17246472	(41371144)	+	(AC)n	Simple_repeat	1	40	(0)	1835834
11	13.2	5.7	2.7	chr19	17250348	17250382	(41367234)	+	(CTGCTTC)n	Simple_repeat	1	37	(0)	1835842
2227	11.8	0.0	1.0	chr19	17250540	17250853	(41366763)	C	AluSq2	SINE/Alu	(2)	311	1	1835843
15	29.0	0.0	0.0	chr19	17390557	17390606	(41227010)	+	(GGAGCG)n	Simple_repeat	1	50	(0)	1836209
191	31.6	2.6	1.3	chr19	17555225	17555301	(41062315)	C	MIRc	SINE/MIR	(74)	194	117	1836687
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
695	29.0	9.6	1.5	chr19	17778935	17779662	(40837954)	C	L2a	LINE/L2	(23)	3403	2474	1837257
218	30.4	1.2	0.0	chr19	17795822	17795900	(40821716)	+	MIR1_Amn	SINE/MIR	74	153	(77)	1837294
1811	15.7	1.0	2.9	chr19	17796080	17796391	(40821225)	C	AluJr	SINE/Alu	(5)	307	2	1837295
15	32.2	0.0	0.0	chr19	17847634	17847639	(40769977)	+	(CCACCCC)n	Simple_repeat	1	19	(39)	1837427
12	18.1	0.0	7.0	chr19	17847640	17847682	(40769934)	+	(CCCCAT)n	Simple_repeat	1	43	(0)	1837428
15	32.2	0.0	0.0	chr19	17847683	17847691	(40769925)	+	(CCACCCC)n	Simple_repeat	20	58	(0)	1837427
226	31.0	2.7	0.0	chr19	18069378	18069448	(40548168)	+	MIR3	SINE/MIR	52	124	(84)	1838000
34	0.0	0.0	0.0	chr19	18221608	18221639	(40395977)	+	(GTTT)n	Simple_repeat	1	32	(0)	1838399
2252	8.4	0.0	0.3	chr19	18221640	18221925	(40395691)	C	AluSx	SINE/Alu	(27)	285	1	1838400
181	32.4	4.3	1.8	chr19	18224033	18224145	(40393471)	+	L2c	LINE/L2	3005	3120	(267)	1838407
18	20.6	3.8	6.1	chr19	18291608	18291686	(40325930)	+	(CTTCCCG)n	Simple_repeat	1	82	(0)	1838553
225	25.7	3.0	2.2	chr19	18307625	18307711	(40309905)	+	MIRc	SINE/MIR	88	174	(56)	1838586
20	24.7	1.8	0.0	chr19	18419440	18419496	(40198120)	+	(GCC)n	Simple_repeat	1	58	(0)	1838870
13	19.8	0.0	2.7	chr19	18419535	18419571	(40198045)	+	G-rich	Low_complexity	1	37	(0)	1838871
13	23.9	1.6	6.5	chr19	18419579	18419639	(40197977)	+	(GGC)n	Simple_repeat	1	62	(0)	1838872
221	34.2	0.0	0.0	chr19	18504382	18504454	(40113162)	+	AmnSINE1	SINE/5S-Deu-L2	348	420	(155)	1838973
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
1926	9.2	5.9	5.9	chr19	18590215	18590518	(40027098)	C	AluSz6	SINE/Alu	(6)	306	3	1839179
2164	13.4	0.0	0.0	chr19	18599108	18599405	(40018211)	C	AluSx1	SINE/Alu	(14)	298	1	1839195
17	20.1	1.6	6.2	chr19	18613805	18613869	(40003747)	+	(CTCCC)n	Simple_repeat	1	62	(0)	1839223
24	14.7	2.1	2.1	chr19	18790493	18790539	(39827077)	+	(CT)n	Simple_repeat	1	48	(0)	1839554
1771	15.8	0.0	7.6	chr19	18915026	18915238	(39702378)	+	AluJo	SINE/Alu	104	303	(9)	1839816
13	16.9	3.0	0.0	chr19	18919888	18919920	(39697696)	+	(CCTCT)n	Simple_repeat	1	34	(0)	1839831
181	40.2	0.0	0.8	chr19	18919952	18920069	(39697547)	+	MIRb	SINE/MIR	3	119	(149)	1839832
207	30.5	4.8	0.0	chr19	18920126	18920184	(39697432)	C	MIRb	SINE/MIR	(84)	184	123	1839833
17	30.4	0.0	1.5	chr19	18932861	18932926	(39684690)	+	(ACCCCC)n	Simple_repeat	1	66	(0)	1839858
416	31.3	6.9	1.8	chr19	19062989	19063154	(39554462)	+	MIR	SINE/MIR	40	214	(48)	1840178
1356	10.9	0.0	0.0	chr19	19375548	19375721	(39241895)	C	AluSg4	SINE/Alu	(5)	305	132	1840860
16	7.7	3.6	0.0	chr19	19378092	19378119	(39239497)	+	(TCTT)n	Simple_repeat	1	29	(0)	1840867
17	17.8	2.2	2.1	chr19	19378120	19378135	(39239481)	+	(TCTTTT)n	Simple_repeat	3	46	(0)	1840868
2225	10.5	0.0	4.6	chr19	19378141	19378316	(39239300)	C	AluSq2	SINE/Alu	(4)	309	140	1840869
2454	6.1	0.0	0.0	chr19	19378317	19378611	(39239005)	C	AluY	SINE/Alu	(15)	296	2	1840870
2296	19.8	5.6	3.5	chr19	19602727	19603269	(39014347)	+	MER74B	LTR/ERVL	58	612	(10)	1841269
1669	15.1	12.8	0.0	chr19	19603300	19603571	(39014045)	C	AluSx1	SINE/Alu	(0)	312	1	1841270
533	19.0	3.4	3.7	chr19	19901640	19901808	(38715808)	+	LTR10B2	LTR/ERV1	204	411	(136)	1841805
2155	9.7	0.7	0.3	chr19	19901810	19902097	(38715519)	+	AluSg7	SINE/Alu	1	289	(20)	1841806
1726	12.8	0.3	17.4	chr19	20103008	20103422	(38514194)	C	LTR14B	LTR/ERVK	(0)	608	1	1842097
62147	11.5	0.8	1.0	chr19	20362808	20371352	(38246264)	+	HERVS71-int	LTR/ERV1	384	8909	(69)	1842535
259	30.6	4.8	3.0	chr19	28490705	28490805	(30126811)	C	L2a	LINE/L2	(58)	3368	3266	1848858
180	31.0	7.7	3.5	chr19	28493950	28494036	(30123580)	+	MIRc	SINE/MIR	91	181	(87)	1848869
17	4.0	0.0	3.6	chr19	29694704	29694731	(28922885)	+	(GGCCT)n	Simple_repeat	1	28	(0)	1850651
588	24.2	5.1	1.1	chr19	30620142	30620347	(27997269)	C	MER102c	DNA/hAT-Charlie	(65)	265	63	1852114
29	0.0	0.0	0.0	chr19	30620348	30620372	(27997244)	+	(AC)n	Simple_repeat	1	25	(0)	1852115
2025	17.5	10.3	1.0	chr19	32366992	32367377	(26250239)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1854670
866	21.1	13.4	0.4	chr19	32367378	32367576	(26250040)	C	L1ME3A	LINE/L1	(833)	5313	5098	1854669
799	12.2	1.7	1.7	chr19	32972462	32972576	(25645040)	C	AluJo	SINE/Alu	(197)	115	1	1855840
325	26.2	10.5	0.7	chr19	33767821	33767966	(24849650)	+	MamRep1879	DNA/hAT-Tip100?	51	212	(4)	1857283
837	14.5	0.0	0.0	chr19	33768294	33768410	(24849206)	+	AluJr	SINE/Alu	2	118	(194)	1857284
1777	11.3	0.0	0.0	chr19	33779686	33779924	(24837692)	C	AluSq10	SINE/Alu	(73)	240	2	1857296
16	15.8	0.0	2.7	chr19	33798581	33798617	(24818999)	+	(CTGGTG)n	Simple_repeat	1	37	(0)	1857337
2292	11.4	0.3	0.0	chr19	34052922	34053229	(24564387)	C	AluSx	SINE/Alu	(3)	309	1	1857784
1102	15.0	0.0	0.0	chr19	34053648	34053807	(24563809)	+	AluSz6	SINE/Alu	138	297	(15)	1857785
929	15.0	0.0	0.0	chr19	34154922	34155074	(24462542)	+	L1MB3	LINE/L1	6021	6173	(10)	1858026
2332	9.5	0.0	0.0	chr19	34155381	34155675	(24461941)	+	AluSz	SINE/Alu	1	295	(17)	1858029
825	13.7	0.0	0.8	chr19	34404033	34404156	(24213460)	+	FLAM_C	SINE/Alu	11	133	(10)	1858560
423	20.0	0.0	0.0	chr19	34404168	34404242	(24213374)	C	L1MC5a	LINE/L1	(635)	2142	2068	1858561
6685	18.0	7.7	3.4	chr19	34559520	34560828	(24056788)	C	HERVS71-int	LTR/ERV1	(7605)	1373	4	1858839
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
15	4.7	0.0	0.0	chr19	35282610	35282631	(23334985)	+	(CCT)n	Simple_repeat	1	22	(0)	1860085
12	28.7	0.0	0.0	chr19	35775679	35775720	(22841896)	+	(CGTC)n	Simple_repeat	1	42	(0)	1861124
18	11.0	2.3	4.5	chr19	35775723	35775765	(22841851)	+	(GCCCC)n	Simple_repeat	1	44	(0)	1861125
14	22.0	2.3	2.2	chr19	35861744	35861787	(22755829)	+	(CCT)n	Simple_repeat	1	45	(0)	1861326
312	32.2	10.0	3.8	chr19	37907541	37907884	(20709732)	+	MIRb	SINE/MIR	1	266	(2)	1865342
16	0.0	0.0	0.0	chr19	37941453	37941470	(20676146)	+	(T)n	Simple_repeat	1	18	(0)	1865431
598	33.4	4.5	2.7	chr19	38004339	38004704	(20612912)	C	MLT1K	LTR/ERVL-MaLR	(19)	576	204	1865600
684	10.1	2.6	2.1	chr19	38375161	38375278	(20242338)	+	FLAM_C	SINE/Alu	4	146	(20)	1866529
2222	11.3	0.0	0.7	chr19	38662910	38663210	(19954406)	C	AluSq2	SINE/Alu	(14)	299	1	1867206
233	34.3	2.7	0.9	chr19	38663321	38663429	(19954187)	C	L2b	LINE/L2	(24)	3351	3241	1867207
268	26.3	49.5	0.0	chr19	38684077	38684209	(19933407)	+	MIR	SINE/MIR	60	259	(3)	1867246
2408	8.3	0.0	1.9	chr19	38690647	38690738	(19926878)	C	AluSg	SINE/Alu	(218)	92	1	1867258
431	12.2	12.9	4.2	chr19	38690740	38690859	(19926757)	+	L1MB7	LINE/L1	6053	6184	(0)	1867253
444	38.0	8.7	0.7	chr19	38690963	38691133	(19926483)	C	L2a	LINE/L2	(19)	3407	3211	1867260
358	34.1	14.6	2.4	chr19	39126752	39126961	(19490655)	C	MIRb	SINE/MIR	(23)	245	6	1868335
16	21.5	1.7	5.0	chr19	39162808	39162866	(19454750)	+	G-rich	Low_complexity	1	60	(0)	1868427
688	10.8	0.8	0.2	chr19	39196518	39196866	(19420750)	C	MSR1	Satellite	(1)	351	1	1868507
619	12.7	1.0	2.1	chr19	39403058	39403506	(19214110)	C	MSR1	Satellite	(0)	444	1	1869004
2074	9.6	1.1	5.7	chr19	39475106	39475406	(19142210)	+	AluSx	SINE/Alu	9	295	(17)	1869158
830	31.1	5.2	4.6	chr19	39475407	39475544	(19142072)	C	L2b	LINE/L2	(463)	2956	2803	1869157
7602	5.9	1.9	3.1	chr19	39479462	39480441	(19137175)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1869167
2150	17.6	9.0	0.9	chr19	39670958	39671394	(18946222)	+	LTR9C	LTR/ERV1	1	476	(190)	1869457
565	29.4	9.3	4.2	chr19	39811463	39811752	(18805864)	C	L1ME3F	LINE/L1	(539)	5704	5404	1869673
209	27.6	12.3	1.8	chr19	40223533	40223660	(18393956)	+	MIRc	SINE/MIR	1	152	(116)	1870528
725	20.8	6.4	10.7	chr19	40512230	40512509	(18105107)	C	L2b	LINE/L2	(2)	3373	3107	1871281
21	24.2	2.2	5.4	chr19	40513021	40513111	(18104505)	+	(GGC)n	Simple_repeat	1	93	(0)	1871282
872	27.7	8.3	4.8	chr19	40523132	40523330	(18094286)	C	L2a	LINE/L2	(215)	3211	3011	1871310
28	19.2	0.0	0.0	chr19	40605493	40605551	(18012065)	+	(GGCGGA)n	Simple_repeat	1	59	(0)	1871506
16	25.4	6.6	1.2	chr19	40717230	40717305	(17900311)	+	(GGC)n	Simple_repeat	1	81	(0)	1871779
437	22.0	2.0	3.7	chr19	41135124	41135370	(17482246)	C	MSR1	Satellite	(8)	242	1	1872667
615	25.7	9.3	9.5	chr19	41172816	41173204	(17444412)	+	L2b	LINE/L2	2958	3342	(45)	1872785
2370	9.9	0.0	0.0	chr19	41173450	41173751	(17443865)	+	AluSz	SINE/Alu	1	302	(10)	1872786
2434	10.6	0.0	0.0	chr19	41175443	41175753	(17441863)	+	AluSx	SINE/Alu	1	311	(1)	1872794
1655	13.0	0.0	3.2	chr19	41189324	41189418	(17428198)	C	AluSx	SINE/Alu	(173)	139	45	1872830
651	25.9	3.2	8.8	chr19	41189553	41189814	(17427802)	C	L2	LINE/L2	(610)	2809	2563	1872832
16	14.4	2.5	2.4	chr19	41218943	41218982	(17398634)	+	(CCAGAGC)n	Simple_repeat	1	41	(0)	1872916
2014	9.7	4.0	1.0	chr19	41449167	41449455	(17168161)	C	AluSz6	SINE/Alu	(14)	298	1	1873462
775	26.4	0.5	0.0	chr19	41563620	41563820	(17053796)	C	LSU-rRNA_Hsa	rRNA	(11)	5024	4823	1873597
3000	15.7	4.8	1.2	chr19	41563832	41564324	(17053292)	C	LSU-rRNA_Hsa	rRNA	(278)	4757	4250	1873598
255	36.4	2.8	2.8	chr19	41851323	41851537	(16766079)	C	L2	LINE/L2	(547)	2872	2658	1874045
252	25.8	12.7	4.6	chr19	41891838	41891967	(16725649)	C	L2b	LINE/L2	(181)	3194	3053	1874136
14	28.6	3.1	1.5	chr19	41995957	41996021	(16621595)	+	(CAGAGA)n	Simple_repeat	1	67	(0)	1874335
18	16.8	0.0	5.8	chr19	41999336	41999387	(16618229)	+	(TCCCCC)n	Simple_repeat	1	52	(0)	1874338
24	19.9	1.4	4.3	chr19	42069925	42069993	(16547623)	+	GA-rich	Low_complexity	1	70	(0)	1874502
22	16.8	8.2	3.3	chr19	42070106	42070190	(16547426)	+	(GCCT)n	Simple_repeat	1	92	(0)	1874503
40	18.7	3.0	1.9	chr19	42070218	42070318	(16547298)	+	GA-rich	Low_complexity	1	104	(0)	1874504
2352	11.2	0.3	0.0	chr19	42072554	42072865	(16544751)	C	AluSp	SINE/Alu	(0)	313	1	1874509
233	27.8	2.2	3.2	chr19	42072868	42072960	(16544656)	C	MIRb	SINE/MIR	(114)	154	63	1874510
704	26.3	9.0	1.3	chr19	42073133	42073367	(16544249)	+	MIR	SINE/MIR	8	262	(0)	1874511
230	27.6	9.5	5.4	chr19	42108883	42108993	(16508623)	+	L2b	LINE/L2	3258	3373	(2)	1874593
647	30.0	10.5	5.1	chr19	42140487	42140837	(16476779)	+	L2b	LINE/L2	3004	3375	(0)	1874665
523	28.3	7.6	6.4	chr19	42143368	42143409	(16474207)	+	L1ME3B	LINE/L1	6166	6207	(35)	1874672
546	32.7	6.7	2.3	chr19	42143647	42144000	(16473616)	+	L2a	LINE/L2	2941	3311	(115)	1874674
22	12.0	4.4	0.0	chr19	42313328	42313372	(16304244)	+	(GCCGGA)n	Simple_repeat	1	47	(0)	1875003
19	11.5	2.5	2.4	chr19	42313400	42313439	(16304177)	+	(GCT)n	Simple_repeat	1	41	(0)	1875004
22	26.5	2.5	5.7	chr19	42323848	42323967	(16293649)	+	(CCCCGC)n	Simple_repeat	1	123	(0)	1875031
2606	6.8	0.0	0.0	chr19	42337497	42337805	(16279811)	C	AluYe6	SINE/Alu	(1)	309	1	1875061
14	25.9	1.9	1.9	chr19	42397477	42397528	(16220088)	+	(TCAC)n	Simple_repeat	1	53	(0)	1875198
439	30.8	12.7	3.5	chr19	42397531	42397974	(16219642)	C	L2b	LINE/L2	(4)	3383	2910	1875199
299	35.2	16.1	0.0	chr19	42566662	42566843	(16050773)	+	L3	LINE/CR1	3779	3995	(104)	1875526
2445	8.6	0.0	2.5	chr19	42567158	42567471	(16050145)	C	AluSc8	SINE/Alu	(5)	306	1	1875527
15	0.0	8.0	0.0	chr19	43667697	43667721	(14949895)	+	(GGAGA)n	Simple_repeat	1	27	(0)	1877376
3337	10.3	5.5	1.2	chr19	44607435	44607925	(14009691)	+	LTR10D	LTR/ERV1	1	513	(0)	1879100
182	18.9	0.0	2.6	chr19	44607962	44607999	(14009617)	+	L2b	LINE/L2	3044	3080	(295)	1879101
180	16.7	5.3	10.0	chr19	44608043	44608102	(14009514)	C	MIRc	SINE/MIR	(195)	73	17	1879102
510	29.7	2.4	0.0	chr19	44608057	44608216	(14009400)	+	MIRb	SINE/MIR	28	195	(73)	1879103
676	22.3	7.7	7.6	chr19	44608233	44608457	(14009159)	+	MIR	SINE/MIR	18	258	(10)	1879104
451	32.6	4.7	0.6	chr19	44723575	44723756	(13893860)	C	L2c	LINE/L2	(226)	3161	2972	1879443
224	39.6	7.3	0.0	chr19	44723776	44723914	(13893702)	C	L2c	LINE/L2	(511)	2908	2759	1879443
17	31.5	0.0	2.7	chr19	44757775	44757849	(13859767)	+	(CCGGCT)n	Simple_repeat	1	75	(0)	1879542
14	28.8	0.0	0.0	chr19	44800462	44800508	(13817108)	+	(CCCCA)n	Simple_repeat	1	47	(0)	1879664
15	19.9	0.0	4.5	chr19	44808301	44808344	(13809272)	+	G-rich	Low_complexity	1	44	(0)	1879682
12	23.6	7.6	1.4	chr19	44844643	44844708	(13772908)	+	(CCCGCCT)n	Simple_repeat	1	71	(0)	1879783
14	18.3	2.7	0.0	chr19	44844880	44844916	(13772700)	+	(AGCCC)n	Simple_repeat	1	38	(0)	1879784
14	26.0	1.9	1.9	chr19	44844984	44845035	(13772581)	+	G-rich	Low_complexity	1	53	(0)	1879785
18	8.5	0.0	0.0	chr19	45039357	45039381	(13578235)	+	(A)n	Simple_repeat	1	25	(0)	1880309
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
15	4.7	0.0	0.0	chr19	45152511	45152532	(13465084)	+	(CTG)n	Simple_repeat	1	22	(0)	1880570
20	14.5	0.0	0.0	chr19	45179478	45179515	(13438101)	+	(CGGAGC)n	Simple_repeat	1	38	(0)	1880623
12558	13.0	2.3	4.2	chr19	45191421	45192852	(13424764)	C	L1M1	LINE/L1	(5431)	2134	207	1880655
186	29.6	1.4	4.0	chr19	45404587	45404660	(13212956)	C	L2	LINE/L2	(2810)	609	538	1881218
1992	12.8	1.0	5.5	chr19	45428072	45428398	(13189218)	C	AluJb	SINE/Alu	(0)	312	1	1881276
12	13.3	2.7	5.3	chr19	45498864	45498900	(13118716)	+	(GCGAGC)n	Simple_repeat	1	38	(0)	1881472
207	30.2	4.0	5.8	chr19	45506393	45506517	(13111099)	+	MIR3	SINE/MIR	50	175	(33)	1881493
2264	6.8	0.0	1.1	chr19	45669668	45669948	(12947668)	+	AluSx1	SINE/Alu	5	282	(30)	1881956
2364	8.4	0.0	0.3	chr19	45670033	45670329	(12947287)	C	AluSz	SINE/Alu	(14)	298	3	1881957
14	10.9	4.3	8.2	chr19	45901755	45901801	(12715815)	+	(CCG)n	Simple_repeat	1	49	(0)	1882529
13	27.4	1.9	1.8	chr19	45902621	45902674	(12714942)	+	(TCCCCCC)n	Simple_repeat	1	55	(0)	1882531
13	25.4	3.6	5.8	chr19	45902752	45902834	(12714782)	+	(CAGCG)n	Simple_repeat	1	86	(0)	1882532
591	24.4	5.2	2.4	chr19	45927752	45927919	(12689697)	+	LTR67B	LTR/ERVL	2	174	(446)	1882602
246	28.9	4.0	2.0	chr19	45928008	45928106	(12689510)	+	LTR67B	LTR/ERVL	412	512	(108)	1882602
277	26.9	5.4	5.4	chr19	46349336	46349484	(12268132)	C	L2a	LINE/L2	(1641)	1778	1630	1883451
246	35.0	13.0	0.9	chr19	46349499	46349720	(12267896)	C	L2	LINE/L2	(421)	2998	2746	1883454
343	27.8	13.5	4.8	chr19	46372975	46373182	(12244434)	C	MIRb	SINE/MIR	(39)	229	1	1883503
467	27.0	13.1	5.4	chr19	46373255	46373493	(12244123)	+	MIRb	SINE/MIR	9	268	(0)	1883504
353	38.1	2.5	1.1	chr19	46412620	46412892	(12204724)	C	MamGyp-int	LTR/Gypsy	(4609)	494	218	1883595
1105	9.8	0.0	4.3	chr19	46489128	46489291	(12128325)	+	AluJo	SINE/Alu	94	250	(62)	1883810
12	18.3	0.0	3.0	chr19	46493463	46493495	(12124121)	+	GA-rich	Low_complexity	1	33	(0)	1883817
13	11.2	0.0	6.1	chr19	46493631	46493663	(12123953)	+	(GCCTG)n	Simple_repeat	1	33	(0)	1883818
461	36.0	2.1	0.3	chr19	46495194	46495527	(12122089)	C	MamGyp-int	LTR/Gypsy	(4726)	377	38	1883819
206	23.9	24.6	5.5	chr19	46530186	46530438	(12087178)	+	L2b	LINE/L2	3058	3374	(1)	1883921
410	31.6	0.6	0.0	chr19	46757310	46757437	(11860179)	+	MIR	SINE/MIR	4	137	(131)	1884453
571	18.2	7.2	4.1	chr19	46851218	46851338	(11766278)	C	AluJr4	SINE/Alu	(179)	133	9	1884739
2192	8.6	0.4	0.0	chr19	47006268	47006580	(11611036)	C	AluSq	SINE/Alu	(0)	313	1	1885043
224	33.0	9.6	0.0	chr19	47012982	47013075	(11604541)	+	L2b	LINE/L2	3220	3323	(52)	1885048
13	30.3	1.5	2.9	chr19	47021515	47021582	(11596034)	+	G-rich	Low_complexity	1	69	(0)	1885085
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
976	10.4	4.2	0.0	chr19	47272493	47272627	(11344989)	+	AluSx	SINE/Alu	148	288	(24)	1885714
24	23.3	4.0	0.0	chr19	47417621	47417695	(11199921)	+	GA-rich	Low_complexity	1	78	(0)	1886115
29	22.3	5.6	1.1	chr19	47419754	47419843	(11197773)	+	(TC)n	Simple_repeat	1	95	(0)	1886117
318	28.5	17.9	3.1	chr19	47599878	47600128	(11017488)	C	L1ME4b	LINE/L1	(142)	750	471	1886538
961	7.6	11.4	0.0	chr19	47780126	47780257	(10837359)	+	AluSx	SINE/Alu	1	149	(163)	1887048
942	18.4	16.0	12.0	chr19	48110376	48110462	(10507154)	+	MLT1B	LTR/ERVL-MaLR	301	379	(11)	1887967
15	28.6	2.3	4.5	chr19	48391489	48391575	(10226041)	+	G-rich	Low_complexity	1	89	(0)	1888647
856	28.6	2.3	0.0	chr19	48489596	48489808	(10127808)	C	MIR	SINE/MIR	(0)	262	45	1888861
190	38.4	1.4	0.0	chr19	48490034	48490106	(10127510)	+	MIRb	SINE/MIR	141	214	(54)	1888862
335	25.8	18.9	10.4	chr19	48490142	48490241	(10127375)	+	MIR	SINE/MIR	21	146	(116)	1888863
386	34.6	3.4	6.8	chr19	48514209	48514456	(10103160)	C	L2b	LINE/L2	(0)	3375	3137	1888914
27	18.4	5.6	7.3	chr19	48599259	48599400	(10018216)	+	(CAGACC)n	Simple_repeat	1	150	(0)	1889184
18	11.7	8.0	3.7	chr19	48645813	48645862	(9971754)	+	(CT)n	Simple_repeat	1	54	(0)	1889271
21	30.9	0.0	3.3	chr19	48713895	48713984	(9903632)	+	(CCGGAG)n	Simple_repeat	1	90	(0)	1889449
2395	8.9	0.3	0.0	chr19	48716094	48716396	(9901220)	+	AluSz	SINE/Alu	1	304	(8)	1889455
25	12.8	3.9	0.0	chr19	48716738	48716788	(9900828)	+	GA-rich	Low_complexity	1	53	(0)	1889456
659	8.8	1.3	0.6	chr19	48754863	48755280	(9862336)	+	MSR1	Satellite	1	420	(0)	1889518
2308	12.5	0.3	0.0	chr19	48813914	48814224	(9803392)	+	AluSz6	SINE/Alu	1	312	(0)	1889669
536	14.7	0.4	1.9	chr19	49065190	49065352	(9552264)	+	MSR1	Satellite	1	160	(0)	1890295
282	16.0	1.3	2.6	chr19	49065388	49065464	(9552152)	+	MSR1	Satellite	9	84	(27)	1890295
2243	8.8	1.0	5.0	chr19	49131164	49131481	(9486135)	C	AluSz	SINE/Alu	(7)	305	1	1890442
1054	12.5	1.7	6.5	chr19	49131624	49131729	(9485887)	+	AluSx3	SINE/Alu	81	188	(123)	1890443
2596	5.0	0.0	0.0	chr19	49131730	49132030	(9485586)	+	AluY	SINE/Alu	2	302	(9)	1890444
12	15.8	0.0	3.3	chr19	49133204	49133233	(9484383)	+	(CCCCT)n	Simple_repeat	1	30	(0)	1890446
294	20.7	2.7	2.5	chr19	49157903	49158099	(9459517)	C	MSR1	Satellite	(0)	197	1	1890486
12	23.1	2.3	2.3	chr19	49428326	49428368	(9189248)	+	(GCCCC)n	Simple_repeat	1	44	(0)	1891083
124	15.4	5.9	2.1	chr19	49444058	49444364	(9173252)	+	(CTTC)n	Simple_repeat	1	325	(0)	1891102
13	16.3	4.5	2.2	chr19	49713987	49714019	(8903597)	+	(CCATCT)n	Simple_repeat	1	34	(0)	1891748
17	27.6	1.9	0.0	chr19	49802408	49802461	(8815155)	+	(CTCC)n	Simple_repeat	1	55	(0)	1891978
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
237	31.2	1.1	2.1	chr19	50234289	50234383	(8383233)	C	L1MC5a	LINE/L1	(2210)	567	474	1893049
445	26.5	1.0	0.0	chr19	50369338	50369435	(8248181)	C	MLT1J2	LTR/ERVL-MaLR	(303)	145	47	1893357
15	21.4	2.3	0.0	chr19	50551111	50551153	(8066463)	+	(CCGCCCT)n	Simple_repeat	1	44	(0)	1893768
216	30.4	1.7	2.5	chr19	50835919	50836036	(7781580)	C	MIRb	SINE/MIR	(27)	241	125	1894437
1122	23.1	12.5	2.5	chr19	51043275	51043589	(7574027)	C	LTR52-int	LTR/ERVL	(3203)	353	3	1894893
486	19.8	2.0	1.0	chr19	51043623	51043719	(7573897)	+	LTR52	LTR/ERVL	324	421	(0)	1894888
199	19.1	0.0	0.0	chr19	51043721	51043762	(7573854)	+	L2c	LINE/L2	3111	3152	(235)	1894894
272	26.4	8.3	8.7	chr19	51182242	51182482	(7435134)	+	L2a	LINE/L2	3128	3367	(59)	1895133
102	13.8	4.3	4.1	chr19	51313517	51313705	(7303911)	+	(TTCT)n	Simple_repeat	1	191	(0)	1895357
12	20.6	6.7	0.0	chr19	51366809	51366853	(7250763)	+	(TCCCTA)n	Simple_repeat	1	48	(0)	1895482
96	28.0	5.8	1.5	chr19	51691175	51691606	(6926010)	+	GA-rich	Low_complexity	1	457	(0)	1896055
392	19.7	2.8	5.0	chr19	51692291	51692601	(6925015)	C	MSR1	Satellite	(24)	304	1	1896057
13	11.2	3.2	3.1	chr19	51719643	51719673	(6897943)	+	(GCC)n	Simple_repeat	1	32	(0)	1896112
39	23.3	4.3	2.7	chr19	51719971	51719983	(6897633)	+	(CTCCCT)n	Simple_repeat	1	148	(0)	1896113
53	25.4	0.8	0.0	chr19	51719984	51720116	(6897500)	+	(TCTC)n	Simple_repeat	1	134	(0)	1896114
2558	6.1	3.4	3.1	chr19	51733352	51733704	(6883912)	+	L1PA8	LINE/L1	5805	6158	(14)	1896145
1285	19.4	5.3	10.9	chr19	51733705	51734273	(6883343)	C	MER49	LTR/ERV1	(132)	771	1	1896144
14	18.2	0.0	4.9	chr19	52269521	52269561	(6348055)	+	(GGCCC)n	Simple_repeat	1	41	(0)	1897145
1101	10.3	2.6	3.2	chr19	52518058	52518234	(6099382)	C	MER4A1	LTR/ERV1	(294)	178	1	1897608
187	26.8	8.9	3.5	chr19	52518389	52518473	(6099143)	C	MER5B	DNA/hAT-Charlie	(1)	177	88	1897610
17	0.0	0.0	6.9	chr19	52527514	52527542	(6090074)	+	(CCCGC)n	Simple_repeat	1	29	(0)	1897629
14	25.6	1.7	3.3	chr19	52527571	52527629	(6089987)	+	(GCGCCCC)n	Simple_repeat	1	60	(0)	1897630
2479	4.0	0.0	1.7	chr19	53197440	53197735	(5419881)	C	AluY	SINE/Alu	(20)	291	1	1898948
554	24.0	3.9	3.2	chr19	53424012	53424166	(5193450)	+	LTR40b	LTR/ERVL	289	444	(18)	1899327
1670	18.6	0.7	1.7	chr19	53425317	53425611	(5192005)	C	AluJb	SINE/Alu	(20)	292	1	1899330
585	30.3	2.5	2.9	chr19	53504576	53504779	(5112837)	+	LTR40b	LTR/ERVL	260	462	(0)	1899478
2297	22.1	5.6	5.2	chr19	53594764	53594991	(5022625)	C	L1P4b	LINE/L1	(6626)	708	467	1899667
1871	24.2	16.4	5.4	chr19	53594992	53595634	(5021982)	C	LTR8A	LTR/ERV1	(0)	727	1	1899671
18	7.0	0.0	3.1	chr19	53866654	53866685	(4750931)	+	(AGCCCC)n	Simple_repeat	1	32	(0)	1900473
196	32.8	3.6	9.3	chr19	53951400	53951623	(4665993)	C	MIR1_Amn	SINE/MIR	(11)	219	15	1900657
650	12.5	1.6	0.5	chr19	54095477	54095856	(4521760)	C	MSR1	Satellite	(8)	384	1	1901066
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
19	3.5	0.0	6.1	chr19	54171963	54171995	(4445621)	+	(CTC)n	Simple_repeat	1	33	(0)	1901228
677	12.9	0.6	0.4	chr19	54172108	54172694	(4444922)	+	MSR1	Satellite	1	587	(0)	1901229
20	16.6	0.0	4.5	chr19	54417984	54418027	(4199589)	+	(AC)n	Simple_repeat	1	44	(0)	1901702
16	5.3	0.0	0.0	chr19	54418036	54418055	(4199561)	+	(TG)n	Simple_repeat	1	20	(0)	1901703
1591	23.2	6.3	3.3	chr19	55060857	55061112	(3556504)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	240	1902914
2177	10.0	0.0	0.7	chr19	55061113	55061424	(3556192)	C	AluSx3	SINE/Alu	(0)	311	5	1902915
2064	7.0	1.5	0.0	chr19	55141524	55141779	(3475837)	C	AluSq2	SINE/Alu	(53)	260	1	1903090
15	22.7	0.0	0.0	chr19	55160495	55160526	(3457090)	+	GA-rich	Low_complexity	1	32	(0)	1903121
210	32.8	6.4	2.2	chr19	55178612	55178745	(3438871)	+	MIR3	SINE/MIR	61	200	(8)	1903169
33	0.0	0.0	0.0	chr19	55178754	55178784	(3438832)	+	(T)n	Simple_repeat	1	31	(0)	1903170
22	23.9	3.5	0.0	chr19	55180268	55180324	(3437292)	+	(GT)n	Simple_repeat	1	59	(0)	1903171
235	34.0	12.0	4.0	chr19	55257535	55257831	(3359785)	+	L2c	LINE/L2	3023	3346	(41)	1903325
611	6.4	4.8	0.1	chr19	55377046	55377467	(3240149)	C	MSR1	Satellite	(1)	442	1	1903608
36	26.2	5.3	2.2	chr19	55383774	55383943	(3233673)	+	G-rich	Low_complexity	1	179	(0)	1903624
694	22.6	4.2	1.6	chr19	55552663	55552846	(3064770)	+	Tigger17c	DNA/TcMar-Tigger	104	292	(896)	1903986
240	25.2	11.6	3.9	chr19	55552847	55552949	(3064667)	+	Tigger17c	DNA/TcMar-Tigger	264	375	(813)	1903987
2312	11.7	1.0	0.0	chr19	55552952	55553260	(3064356)	+	AluSz	SINE/Alu	1	312	(0)	1903988
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
930	17.7	1.5	2.5	chr19	56115960	56116156	(2501460)	+	L1MC1	LINE/L1	6129	6323	(10)	1905133
26	0.0	0.0	0.0	chr19	57363364	57363388	(1254228)	+	(TGCG)n	Simple_repeat	1	25	(0)	1907684
1348	15.3	7.1	0.4	chr19	57888158	57888407	(729209)	+	LTR62	LTR/ERVL	442	709	(0)	1908499
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
253	33.3	4.1	0.0	chr19	58381392	58381508	(236108)	+	MER5B	DNA/hAT-Charlie	30	151	(27)	1909440
20	13.8	2.5	0.0	chr19	58396190	58396229	(221387)	+	GA-rich	Low_complexity	1	41	(0)	1909464
11	24.3	5.5	1.7	chr19	58573164	58573218	(44398)	+	(CCTTCC)n	Simple_repeat	1	58	(0)	1909747
931	24.2	11.3	1.9	chr2	1341465	1341816	(240851713)	C	LTR48	LTR/ERV1	(360)	427	1	1912119
1108	15.9	0.0	0.0	chr2	1341847	1342009	(240851520)	C	AluJo	SINE/Alu	(13)	299	137	1912120
3547	9.8	0.2	1.5	chr2	1616959	1617435	(240576094)	+	MER4A1	LTR/ERV1	2	472	(0)	1912352
4319	13.9	1.1	1.0	chr2	1617436	1617459	(240576070)	+	L1PA16	LINE/L1	5958	5978	(188)	1912351
207	29.7	11.9	0.8	chr2	1685815	1685933	(240507596)	C	MIR3	SINE/MIR	(54)	154	21	1912408
13	18.8	0.0	0.0	chr2	2027182	2027212	(240166317)	+	(GATCTG)n	Simple_repeat	1	31	(0)	1912768
250	21.9	1.9	0.0	chr2	3303160	3303216	(238890313)	C	MLT1N2	LTR/ERVL-MaLR	(15)	547	472	1914293
238	33.3	1.8	3.6	chr2	3303570	3303681	(238889848)	C	MLT1N2	LTR/ERVL-MaLR	(431)	131	22	1914294
786	25.7	3.8	0.4	chr2	5727263	5727489	(236466040)	C	MIR	SINE/MIR	(21)	241	7	1917512
2898	11.1	0.7	12.6	chr2	6995364	6995878	(235197651)	C	MLT2A2	LTR/ERVL	(0)	453	1	1919279
202	26.9	9.7	9.2	chr2	7431995	7432178	(234761351)	C	MIRb	SINE/MIR	(0)	268	84	1919897
1309	24.3	6.0	0.3	chr2	7891272	7891601	(234301928)	+	L1M4	LINE/L1	2	351	(7166)	1920584
359	13.3	13.5	2.2	chr2	7891601	7891692	(234301837)	+	L1M4	LINE/L1	1774	1877	(5640)	1920584
235	33.6	13.7	0.0	chr2	8526293	8526405	(233667124)	C	MIRb	SINE/MIR	(61)	207	77	1921517
12	22.2	0.0	7.4	chr2	8685541	8685594	(233507935)	+	(CCCCGG)n	Simple_repeat	1	54	(0)	1921733
266	27.5	4.7	6.6	chr2	9473557	9473708	(232719821)	C	MER5B	DNA/hAT-Charlie	(0)	178	30	1923010
260	26.6	11.0	0.9	chr2	9473952	9474065	(232719464)	+	MER2	DNA/TcMar-Tigger	2	128	(217)	1923011
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
452	31.2	4.0	2.3	chr2	9770517	9770733	(232422796)	C	MIR	SINE/MIR	(43)	225	2	1923619
2417	10.3	0.0	0.0	chr2	9949245	9949555	(232243974)	+	AluSx1	SINE/Alu	1	311	(1)	1923941
1561	24.8	15.3	1.5	chr2	9949773	9950573	(232242956)	+	L2a	LINE/L2	2107	3038	(381)	1923942
1458	22.4	4.7	1.1	chr2	10030269	10030620	(232162909)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1924040
11	30.2	3.7	0.0	chr2	10030692	10030745	(232162784)	+	A-rich	Low_complexity	1	56	(0)	1924041
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
326	35.0	11.6	1.8	chr2	10060697	10060914	(232132615)	+	MIRb	SINE/MIR	19	260	(8)	1924093
205	32.0	2.6	4.4	chr2	10285437	10285563	(231907966)	C	MIR3	SINE/MIR	(73)	195	68	1924513
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
2212	10.3	1.0	0.3	chr2	10834777	10835066	(231358463)	C	AluSz	SINE/Alu	(19)	293	2	1925570
244	26.1	6.1	3.2	chr2	10911341	10911435	(231282094)	+	MIR3	SINE/MIR	16	113	(95)	1925715
14	30.3	0.0	1.9	chr2	10911767	10911820	(231281709)	+	(GCG)n	Simple_repeat	1	54	(0)	1925716
428	25.9	1.6	10.8	chr2	11345436	11345647	(230847882)	+	L1ME4c	LINE/L1	322	513	(317)	1926454
7557	16.6	3.1	2.7	chr2	11974406	11975838	(230217691)	C	L1MA4A	LINE/L1	(4529)	3037	802	1927558
548	34.4	1.8	4.3	chr2	11975857	11976090	(230217439)	C	MIRb	SINE/MIR	(39)	229	2	1927561
293	33.1	13.5	0.6	chr2	12673961	12674121	(229519408)	+	MIRb	SINE/MIR	1	185	(83)	1928694
339	26.1	0.1	0.4	chr2	15985263	15986100	(226207429)	+	(TG)n	Simple_repeat	1	839	(0)	1933701
214	31.1	8.0	1.9	chr2	16021762	16021866	(226171663)	C	MIR3	SINE/MIR	(74)	134	23	1933792
272	36.4	3.3	0.8	chr2	16021941	16022059	(226171470)	+	MIR3	SINE/MIR	81	202	(6)	1933793
305	20.4	0.9	9.0	chr2	16022218	16022321	(226171208)	+	L2b	LINE/L2	3294	3379	(8)	1933794
261	29.9	9.7	2.8	chr2	16224279	16224463	(225969066)	C	L2c	LINE/L2	(0)	3426	3188	1934178
309	31.5	18.9	0.5	chr2	16224464	16224661	(225968868)	+	MIRb	SINE/MIR	4	246	(22)	1934179
524	27.8	2.5	4.2	chr2	17125862	17126076	(225067453)	+	MIRc	SINE/MIR	42	250	(18)	1935547
569	34.1	8.1	4.5	chr2	17126108	17126666	(225066863)	+	L2	LINE/L2	1570	2150	(1269)	1935548
188	28.7	8.2	2.9	chr2	17303647	17303750	(224889779)	+	L2c	LINE/L2	3088	3197	(190)	1935808
6534	18.1	5.9	1.1	chr2	17469937	17471655	(224721874)	C	L1M3f	LINE/L1	(4553)	3012	1239	1936010
13	16.9	0.0	8.5	chr2	17538994	17539040	(224654489)	+	(CCGCGCT)n	Simple_repeat	1	47	(0)	1936102
2365	11.0	0.7	0.0	chr2	17747494	17747803	(224445726)	C	AluSz	SINE/Alu	(0)	312	1	1936448
1031	19.1	7.1	0.0	chr2	17747821	17748029	(224445500)	C	Charlie1	DNA/hAT-Charlie	(2554)	227	3	1936449
691	18.4	0.7	7.5	chr2	17748156	17748314	(224445215)	+	MER5A1	DNA/hAT-Charlie	7	154	(12)	1936450
221	29.9	13.7	5.6	chr2	17915170	17915382	(224278147)	+	MamRTE1	LINE/RTE-BovB	1874	2106	(1706)	1936709
494	29.9	9.3	2.4	chr2	17915516	17915724	(224277805)	+	MIRb	SINE/MIR	39	263	(5)	1936710
13	19.9	6.5	0.0	chr2	20447376	20447421	(221746108)	+	(GCGAGCG)n	Simple_repeat	1	49	(0)	1940394
15	18.4	7.0	1.6	chr2	20666536	20666601	(221526928)	+	(CCTCCCCT)n	Simple_repeat	1	69	(0)	1940718
1875	12.6	6.3	2.2	chr2	21840514	21840878	(220352651)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1942273
11145	11.8	1.2	0.9	chr2	21840879	21842504	(220351025)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1942273
27	19.8	2.8	1.4	chr2	23385555	23385633	(218807896)	+	GA-rich	Low_complexity	1	80	(0)	1944314
14	9.3	0.0	0.0	chr2	23385906	23385928	(218807601)	+	(CGG)n	Simple_repeat	1	23	(0)	1944315
291	12.2	0.0	0.0	chr2	23589873	23589913	(218603616)	+	MER91C	DNA/hAT-Tip100	4	44	(96)	1944575
321	27.0	7.6	0.0	chr2	23590069	23590208	(218603321)	C	MIRc	SINE/MIR	(116)	152	1	1944576
300	23.5	5.0	8.7	chr2	24050667	24050792	(218142737)	C	MamGypLTR1a	LTR/Gypsy	(33)	751	631	1945414
13	17.4	0.0	2.9	chr2	24123807	24123840	(218069689)	+	G-rich	Low_complexity	1	34	(0)	1945548
1529	18.3	2.1	4.8	chr2	24412738	24412882	(217780647)	C	AluJr	SINE/Alu	(176)	136	1	1946072
1568	25.4	7.0	1.6	chr2	24412887	24413398	(217780131)	C	L1ME4b	LINE/L1	(4)	888	347	1946074
375	28.9	8.6	3.2	chr2	24827118	24827271	(217366258)	C	MIR3	SINE/MIR	(0)	208	46	1946785
314	30.9	10.1	2.4	chr2	24932585	24932793	(217260736)	C	L2b	LINE/L2	(224)	3151	2925	1946966
1256	25.2	8.1	4.1	chr2	24932887	24933322	(217260207)	C	MLT1C	LTR/ERVL-MaLR	(10)	457	14	1946964
12	19.6	3.9	5.6	chr2	25042722	25042773	(217150756)	+	(GCG)n	Simple_repeat	1	54	(0)	1947189
249	29.1	18.4	0.7	chr2	25276245	25276424	(216917105)	+	MIR	SINE/MIR	28	258	(10)	1947636
733	19.9	9.5	1.7	chr2	25310771	25310944	(216882585)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1947704
229	34.3	2.0	5.9	chr2	25310945	25310968	(216882561)	C	L2c	LINE/L2	(123)	3264	3241	1947703
752	32.2	5.6	0.4	chr2	25311657	25311893	(216881636)	C	MIRc	SINE/MIR	(0)	268	19	1947705
14	27.2	1.4	5.4	chr2	25315134	25315206	(216878323)	+	(CCCTTC)n	Simple_repeat	1	74	(0)	1947710
12	22.1	4.8	0.0	chr2	25336612	25336653	(216856876)	+	(CCCCT)n	Simple_repeat	1	44	(0)	1947747
273	32.4	15.7	2.3	chr2	25336861	25337075	(216856454)	+	L2b	LINE/L2	3122	3370	(5)	1947748
21	21.1	0.0	0.0	chr2	25340723	25340771	(216852758)	+	(GTGCGT)n	Simple_repeat	1	49	(0)	1947753
14	23.1	2.1	2.1	chr2	25340887	25340933	(216852596)	+	(CCG)n	Simple_repeat	1	48	(0)	1947754
312	31.7	7.5	3.1	chr2	25664759	25664885	(216528644)	C	MIRb	SINE/MIR	(131)	137	5	1948331
2307	10.9	0.0	0.0	chr2	25665345	25665638	(216527891)	+	AluSc8	SINE/Alu	1	294	(17)	1948332
435	29.9	4.4	9.8	chr2	25983515	25983729	(216209800)	+	MIRc	SINE/MIR	14	216	(52)	1949042
2530	5.5	0.0	2.2	chr2	26137841	26138152	(216055377)	+	AluY	SINE/Alu	1	305	(6)	1949404
341	29.1	8.5	0.0	chr2	26818100	26818250	(215375279)	+	L1M5	LINE/L1	5589	5753	(371)	1950686
300	20.6	5.2	0.0	chr2	26818257	26818329	(215375200)	C	MLT1N2	LTR/ERVL-MaLR	(6)	556	480	1950687
334	30.0	8.3	5.3	chr2	26818349	26818651	(215374878)	C	MLT1N2	LTR/ERVL-MaLR	(137)	425	113	1950687
15	26.8	3.0	2.9	chr2	26847631	26847696	(215345833)	+	(GGC)n	Simple_repeat	1	68	(0)	1950751
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
557	28.4	3.4	0.6	chr2	27716768	27716980	(214476549)	C	MIR	SINE/MIR	(53)	215	3	1952335
13	3.7	10.7	0.0	chr2	27717031	27717058	(214476471)	+	(TTTG)n	Simple_repeat	1	31	(0)	1952336
373	32.7	10.2	1.3	chr2	28658737	28658888	(213534641)	+	MIR	SINE/MIR	2	168	(94)	1953941
332	32.0	6.2	5.1	chr2	28811152	28811309	(213382220)	+	L1M4b	LINE/L1	458	617	(6250)	1954259
1472	19.3	11.8	0.3	chr2	29105642	29105964	(213087565)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1954805
250	29.9	3.0	4.0	chr2	30208880	30208980	(211984549)	C	L1ME5	LINE/L1	(49)	6145	6046	1956570
368	31.8	4.1	5.0	chr2	30307349	30307547	(211885982)	C	MIR3	SINE/MIR	(11)	197	1	1956737
14	7.3	3.0	5.9	chr2	30346590	30346622	(211846907)	+	(CCT)n	Simple_repeat	1	34	(0)	1956824
483	25.7	4.2	0.0	chr2	30648196	30648331	(211545198)	C	MER5B	DNA/hAT-Charlie	(24)	154	13	1957347
3422	19.1	10.9	0.4	chr2	30651824	30652636	(211540893)	+	L1MC4a	LINE/L1	6903	7811	(71)	1957358
323	32.7	0.9	0.9	chr2	30652637	30652744	(211540785)	+	L2a	LINE/L2	3027	3134	(292)	1957359
292	35.4	4.1	4.1	chr2	31147836	31148006	(211045523)	+	MIR3	SINE/MIR	10	180	(28)	1958038
348	31.0	0.0	0.0	chr2	31239651	31239750	(210953779)	+	MIRb	SINE/MIR	90	189	(79)	1958204
363	27.4	9.1	8.7	chr2	33375842	33376411	(208817118)	C	MamRep1151	LTR?	(66)	643	67	1961856
27111	12.4	5.5	5.4	chr2	33611701	33616900	(208576629)	+	HUERS-P1-int	LTR/ERV1	1	4993	(953)	1962265
1849	21.4	1.8	14.8	chr2	35176382	35177023	(207016506)	C	LTR6A	LTR/ERV1	(1)	563	1	1964484
253	17.4	2.1	0.0	chr2	35177024	35177069	(207016460)	C	AluSz	SINE/Alu	(146)	166	120	1964485
2114	26.9	11.7	4.4	chr2	35177071	35178534	(207014995)	C	L1MEf	LINE/L1	(1993)	4153	2569	1964479
20689	14.1	2.9	0.7	chr2	35889077	35894928	(206298601)	C	L1MA3	LINE/L1	(0)	7724	1653	1965323
53	2.0	0.0	0.0	chr2	35894929	35894978	(206298551)	+	(GT)n	Simple_repeat	1	50	(0)	1965324
20689	14.8	4.9	1.4	chr2	35894979	35896631	(206296898)	C	L1MA3	LINE/L1	(5913)	1652	14	1965323
12	20.0	0.0	0.0	chr2	36356265	36356293	(205837236)	+	GA-rich	Low_complexity	1	29	(0)	1965965
14	21.9	1.6	6.5	chr2	36356325	36356348	(205837181)	+	(CGGCTG)n	Simple_repeat	1	39	(23)	1965966
16	8.5	0.0	0.0	chr2	36356349	36356373	(205837156)	+	(GCT)n	Simple_repeat	1	25	(0)	1965967
14	21.9	1.6	6.5	chr2	36356374	36356385	(205837144)	+	(CGGCTG)n	Simple_repeat	40	62	(0)	1965966
225	34.6	5.7	1.5	chr2	37588391	37588525	(204605004)	+	MIR3	SINE/MIR	45	185	(23)	1967970
496	33.1	10.9	9.2	chr2	37588496	37589097	(204604432)	+	L2b	LINE/L2	2757	3386	(1)	1967971
12	15.8	0.0	3.3	chr2	38076214	38076243	(204117286)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1968657
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
26	6.1	0.0	0.0	chr2	39120971	39121004	(203072525)	+	(GCC)n	Simple_repeat	1	34	(0)	1970592
19	11.2	0.0	0.0	chr2	39121123	39121151	(203072378)	+	(GA)n	Simple_repeat	1	29	(0)	1970593
443	31.1	10.3	6.0	chr2	39571463	39571913	(202621616)	+	L2c	LINE/L2	2915	3387	(0)	1971437
2333	10.0	0.0	0.0	chr2	39646648	39646948	(202546581)	C	AluSx3	SINE/Alu	(10)	301	1	1971559
2341	14.3	13.3	2.0	chr2	39646956	39647449	(202546080)	C	MER74A	LTR/ERVL	(0)	558	1	1971560
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
472	22.1	14.0	2.9	chr2	39779499	39779658	(202413871)	C	MIR3	SINE/MIR	(14)	194	20	1971735
26	10.6	7.9	1.5	chr2	42492753	42492815	(199700714)	+	(GGACG)n	Simple_repeat	1	68	(0)	1975680
12	15.3	2.4	7.0	chr2	42493992	42494033	(199699496)	+	(CGG)n	Simple_repeat	1	43	(0)	1975681
28	0.0	3.3	0.0	chr2	42810107	42810136	(199383393)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1976361
928	16.2	1.7	8.5	chr2	42875876	42876064	(199317465)	C	MER45A	DNA/hAT-Tip100	(0)	178	3	1976475
365	32.2	7.6	5.7	chr2	42922468	42923073	(199270456)	+	L2c	LINE/L2	2527	3143	(244)	1976554
359	28.3	3.1	2.3	chr2	42931562	42931691	(199261838)	C	MER5A1	DNA/hAT-Charlie	(35)	131	1	1976565
14	23.1	1.9	3.6	chr2	42931740	42931793	(199261736)	+	(CTGCCT)n	Simple_repeat	1	55	(0)	1976566
182	38.6	2.9	1.0	chr2	42951391	42951492	(199242037)	C	MIRc	SINE/MIR	(2)	266	163	1976605
184	26.9	2.9	2.9	chr2	42951522	42951590	(199241939)	C	MIR3	SINE/MIR	(134)	74	6	1976597
525	25.1	7.9	3.5	chr2	42951608	42951776	(199241753)	C	MER63A	DNA/hAT-Blackjack	(28)	182	6	1976606
14	26.5	1.6	3.2	chr2	43100698	43100759	(199092770)	+	(CCCCTCG)n	Simple_repeat	1	63	(0)	1976874
12	18.7	0.0	3.0	chr2	43107309	43107341	(199086188)	+	GA-rich	Low_complexity	1	33	(0)	1976882
20	4.3	0.0	0.0	chr2	43107639	43107662	(199085867)	+	(A)n	Simple_repeat	1	24	(0)	1976883
13	23.0	0.0	2.6	chr2	43225378	43225415	(198968114)	+	(CTG)n	Simple_repeat	1	38	(0)	1977141
11	13.4	4.2	8.0	chr2	44362005	44362052	(197831477)	+	(GAGACGC)n	Simple_repeat	1	50	(0)	1979091
639	26.7	10.8	4.4	chr2	46487528	46487891	(195705638)	C	MLT1J	LTR/ERVL-MaLR	(10)	502	113	1982331
15	27.7	0.0	1.9	chr2	46812453	46812506	(195381023)	+	GA-rich	Low_complexity	1	54	(0)	1982845
862	17.2	0.0	0.0	chr2	47237256	47237389	(194956140)	+	FLAM_C	SINE/Alu	1	134	(9)	1983603
926	22.8	6.2	0.0	chr2	47664786	47664996	(194528533)	C	MIR	SINE/MIR	(36)	226	2	1984503
602	26.4	8.6	1.9	chr2	47665229	47665459	(194528070)	C	MIRc	SINE/MIR	(0)	268	15	1984504
1731	16.8	0.0	4.8	chr2	48230549	48230863	(193962666)	+	AluJo	SINE/Alu	11	310	(2)	1985608
345	26.4	13.0	1.1	chr2	48230925	48231100	(193962429)	C	LTR16E2	LTR/ERVL	(357)	211	12	1985609
292	30.8	1.9	1.9	chr2	48231112	48231217	(193962312)	+	MER5A	DNA/hAT-Charlie	82	187	(2)	1985610
733	23.3	6.9	0.0	chr2	48444625	48444800	(193748729)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1985976
306	34.4	13.7	0.7	chr2	48587048	48587199	(193606330)	+	MER5B	DNA/hAT-Charlie	4	178	(0)	1986266
28	0.0	0.0	0.0	chr2	48587284	48587310	(193606219)	+	(TATT)n	Simple_repeat	1	27	(0)	1986267
2192	10.7	0.0	0.0	chr2	48587311	48587590	(193605939)	C	AluSx4	SINE/Alu	(30)	280	1	1986268
50	0.0	0.0	0.0	chr2	51032511	51032553	(191160976)	+	(AG)n	Simple_repeat	1	43	(0)	1989562
459	25.0	17.9	0.5	chr2	54615483	54615667	(187577862)	C	MIR	SINE/MIR	(2)	260	37	1994632
7884	17.8	10.1	7.8	chr2	54708540	54710604	(187482925)	+	MER52D	LTR/ERV1	4	2122	(1)	1994715
32	21.9	1.3	0.0	chr2	55050129	55050207	(187143322)	+	(TCCTCC)n	Simple_repeat	1	80	(0)	1995181
13	21.7	0.0	0.0	chr2	55050321	55050352	(187143177)	+	(GCC)n	Simple_repeat	1	32	(0)	1995182
243	35.3	11.7	4.9	chr2	55951264	55951674	(186241855)	C	L2c	LINE/L2	(700)	2719	2277	1996798
1694	10.2	1.3	0.4	chr2	55951779	55952014	(186241515)	C	7SK	RNA	(93)	238	1	1996800
2156	13.8	0.7	0.0	chr2	58502758	58503061	(183690468)	+	AluJb	SINE/Alu	1	306	(6)	1999878
264	30.9	6.8	6.8	chr2	58606769	58607004	(183586525)	C	UCON86	LINE/L2	(349)	333	98	2000025
784	27.4	5.0	0.8	chr2	60285309	60285558	(181907971)	C	MIR	SINE/MIR	(0)	262	2	2002217
543	26.1	13.2	1.7	chr2	60298718	60299017	(181894512)	+	ORSL-2a	DNA/hAT-Tip100	1	340	(2)	2002231
270	29.1	9.1	7.2	chr2	60634737	60634929	(181558600)	+	MamRep605	LTR?	455	651	(198)	2002711
17	13.7	0.0	0.0	chr2	61017811	61017842	(181175687)	+	(CCGGGA)n	Simple_repeat	1	32	(0)	2003500
17	25.1	0.0	0.0	chr2	61538196	61538242	(180655287)	+	(GCTGCC)n	Simple_repeat	1	47	(0)	2004523
1196	24.1	5.3	0.5	chr2	61959704	61960096	(180233433)	C	LTR10C	LTR/ERV1	(43)	590	96	2005563
19	0.0	0.0	0.0	chr2	61960114	61960134	(180233395)	+	(TG)n	Simple_repeat	1	21	(0)	2005564
24	26.7	4.6	0.0	chr2	62195999	62196085	(179997444)	+	G-rich	Low_complexity	1	91	(0)	2006020
600	34.6	5.7	10.7	chr2	62526352	62526781	(179666748)	+	L3	LINE/CR1	3614	4020	(79)	2006639
1831	16.7	1.0	2.6	chr2	62526816	62527121	(179666408)	C	AluJo	SINE/Alu	(11)	301	1	2006643
2873	0.7	0.0	0.3	chr2	64728550	64728851	(177464678)	+	AluYa5	SINE/Alu	1	301	(10)	2009845
295	14.7	0.0	0.8	chr2	65227315	65227374	(176966155)	+	L1MC4a	LINE/L1	6681	6725	(1157)	2010876
365	30.3	10.4	3.9	chr2	65292306	65292511	(176901018)	C	MIRb	SINE/MIR	(6)	262	42	2010992
268	31.4	7.0	2.3	chr2	65309885	65310078	(176883451)	+	MIRb	SINE/MIR	1	202	(66)	2011034
228	28.1	11.2	7.0	chr2	65724815	65725028	(176468501)	+	MIRc	SINE/MIR	10	233	(35)	2011808
557	24.2	9.7	1.3	chr2	65725064	65725214	(176468315)	C	MIR	SINE/MIR	(23)	239	75	2011809
675	34.1	8.9	4.1	chr2	69290556	69291213	(172902316)	C	L1ME3Cz	LINE/L1	(6238)	865	173	2016799
307	31.1	9.5	4.4	chr2	70085548	70085755	(172107774)	+	MIR	SINE/MIR	38	250	(12)	2018347
28	26.2	0.0	2.3	chr2	70258014	70258099	(171935430)	+	(GGCGG)n	Simple_repeat	1	86	(0)	2018746
17	8.7	11.8	1.8	chr2	70887854	70887904	(171305625)	+	(CTCCCGCG)n	Simple_repeat	1	57	(0)	2019774
13	8.5	4.0	0.0	chr2	70887938	70887962	(171305567)	+	(CCTTT)n	Simple_repeat	1	26	(0)	2019775
546	21.0	6.9	1.1	chr2	71306608	71306785	(170886744)	C	MLT1K	LTR/ERVL-MaLR	(4)	591	403	2020462
777	27.8	11.8	1.7	chr2	71306804	71307092	(170886437)	C	MLT1K	LTR/ERVL-MaLR	(273)	322	1	2020462
193	33.9	3.1	4.6	chr2	71467022	71467151	(170726378)	+	MIRc	SINE/MIR	109	236	(32)	2020682
242	35.7	0.9	0.0	chr2	71694044	71694155	(170499374)	+	MamRep605	LTR?	16	128	(721)	2021018
11	24.8	0.0	2.5	chr2	71852539	71852578	(170340951)	+	G-rich	Low_complexity	1	40	(0)	2021226
182	27.1	10.6	0.0	chr2	72027586	72027644	(170165885)	+	L3	LINE/CR1	566	631	(3468)	2021479
15	11.7	0.0	0.0	chr2	72144857	72144884	(170048645)	+	(GCGGG)n	Simple_repeat	1	28	(0)	2021630
30	7.5	5.2	1.6	chr2	72149063	72149120	(170044409)	+	(CGCCGCC)n	Simple_repeat	1	61	(0)	2021638
31	4.9	4.7	0.0	chr2	72149253	72149295	(170044234)	+	(CA)n	Simple_repeat	1	45	(0)	2021639
19	15.8	2.4	0.0	chr2	72917421	72917462	(169276067)	+	(CCCGC)n	Simple_repeat	1	43	(0)	2022809
44	0.0	0.0	0.0	chr2	72919181	72919218	(169274311)	+	(AC)n	Simple_repeat	1	38	(0)	2022811
264	30.6	8.0	4.4	chr2	72962432	72962612	(169230917)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	2022851
237	22.7	4.3	0.0	chr2	72962667	72962732	(169230797)	+	MIRb	SINE/MIR	200	268	(0)	2022852
13	21.5	2.1	4.2	chr2	72963533	72963579	(169229950)	+	G-rich	Low_complexity	1	48	(0)	2022853
12	9.1	4.2	0.0	chr2	72973935	72973958	(169219571)	+	(CCA)n	Simple_repeat	1	25	(0)	2022870
18	25.4	1.8	0.0	chr2	73269059	73269125	(168924404)	+	G-rich	Low_complexity	1	68	(0)	2023421
867	27.2	10.6	1.5	chr2	73552813	73553268	(168640261)	+	HAL1	LINE/L1	1075	1576	(931)	2023856
678	25.0	9.5	16.0	chr2	73553266	73554119	(168639410)	+	HAL1	LINE/L1	1710	2501	(6)	2023856
370	32.3	9.8	4.0	chr2	73978845	73979121	(168214408)	+	L2	LINE/L2	2500	2794	(625)	2024565
351	27.7	3.8	2.9	chr2	73979193	73979296	(168214233)	C	L2c	LINE/L2	(200)	3187	3083	2024566
4873	12.3	2.8	0.1	chr2	74187899	74188644	(168004885)	+	LTR27C	LTR/ERV1	2	767	(0)	2024957
882	19.6	0.0	0.0	chr2	74188645	74188787	(168004742)	+	AluJb	SINE/Alu	158	300	(12)	2024958
252	28.0	15.5	0.8	chr2	74437110	74437235	(167756294)	+	MIRb	SINE/MIR	50	197	(71)	2025388
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
554	34.3	6.1	2.4	chr2	75274462	75274918	(166918611)	C	L1MA4	LINE/L1	(5804)	1692	1218	2026717
1915	11.8	6.3	7.8	chr2	76355926	76356312	(165837217)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2028259
11075	11.0	1.6	0.4	chr2	76356313	76357924	(165835605)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	2028259
17	23.0	1.3	6.6	chr2	77550205	77550279	(164643250)	+	A-rich	Low_complexity	1	76	(0)	2029813
958	21.0	1.1	0.0	chr2	77550332	77550512	(164643017)	C	MER5A	DNA/hAT-Charlie	(4)	185	3	2029814
6460	12.4	10.7	1.8	chr2	79669377	79670537	(162522992)	C	MER52C	LTR/ERV1	(1)	1277	1	2032599
14	7.5	3.3	3.2	chr2	79670549	79670578	(162522951)	+	(AAAT)n	Simple_repeat	1	31	(0)	2032600
278	27.1	1.4	4.1	chr2	80502020	80502092	(161691437)	+	MIRb	SINE/MIR	18	88	(180)	2033861
5007	19.6	9.5	6.7	chr2	81481148	81482372	(160711157)	C	LTR2752	LTR/ERV1	(0)	1263	1	2035101
12203	19.8	5.0	2.4	chr2	81482373	81483087	(160710442)	C	L1MDa	LINE/L1	(2000)	4531	3793	2035100
1108	14.7	0.6	1.2	chr2	85525487	85525656	(156667873)	+	AluJo	SINE/Alu	1	169	(143)	2040969
13	13.5	6.7	4.2	chr2	85539558	85539602	(156653927)	+	(TCCCT)n	Simple_repeat	1	48	(0)	2041000
14	20.2	0.0	0.0	chr2	86195447	86195480	(155998049)	+	(GCGT)n	Simple_repeat	1	34	(0)	2042218
234	29.3	0.0	2.6	chr2	86195964	86196040	(155997489)	C	MIRb	SINE/MIR	(186)	82	8	2042219
16858	21.4	3.9	5.0	chr2	86380847	86382290	(155811239)	C	L1MA5	LINE/L1	(3816)	3746	2359	2042569
746	33.6	6.0	4.1	chr2	86382386	86382872	(155810657)	C	L1MA5	LINE/L1	(5784)	1712	1216	2042569
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
15	22.9	2.0	2.0	chr2	96265749	96265817	(145927712)	+	G-rich	Low_complexity	1	69	(0)	2051856
18	22.1	2.1	0.0	chr2	96266002	96266048	(145927481)	+	(TCC)n	Simple_repeat	1	48	(0)	2051857
12	24.4	4.4	4.2	chr2	96321923	96321990	(145871539)	+	(GGAGGC)n	Simple_repeat	1	71	(0)	2051942
12	12.5	0.0	3.6	chr2	96869468	96869495	(145324034)	+	G-rich	Low_complexity	1	28	(0)	2052933
11	27.8	0.0	2.2	chr2	96869765	96869809	(145323720)	+	(GCCCCA)n	Simple_repeat	1	45	(0)	2052934
18	3.7	3.6	0.0	chr2	96907533	96907560	(145285969)	+	(CCAGG)n	Simple_repeat	1	29	(0)	2052987
556	26.4	1.8	4.0	chr2	96984914	96985087	(145208442)	C	MER104	DNA/TcMar-Tc2	(6)	175	6	2053131
222	33.1	7.0	2.3	chr2	97110816	97111034	(145082495)	+	L2c	LINE/L2	3052	3295	(92)	2053339
258	35.0	4.2	0.0	chr2	97111194	97111330	(145082199)	+	L3	LINE/CR1	3831	3973	(126)	2053340
2225	10.2	0.7	0.3	chr2	97111365	97111667	(145081862)	+	AluSg4	SINE/Alu	1	304	(6)	2053341
11427	12.9	5.7	2.8	chr2	97860703	97863313	(144330216)	+	L1MA3	LINE/L1	19	3029	(4536)	2054215
769	20.0	4.1	2.1	chr2	98608861	98609049	(143584480)	C	MER53	DNA/hAT	(0)	193	1	2055213
381	29.2	9.3	2.1	chr2	99709957	99710145	(142483384)	+	MIRb	SINE/MIR	8	211	(57)	2056882
1086	22.1	10.2	10.9	chr2	100793053	100793229	(141400300)	C	MLT1D	LTR/ERVL-MaLR	(311)	194	8	2058533
27	0.0	0.0	9.1	chr2	101151444	101151487	(141042042)	+	(GCCCC)n	Simple_repeat	1	44	(0)	2059059
342	28.2	7.6	4.0	chr2	102120704	102120880	(140072649)	+	L2a	LINE/L2	3243	3426	(0)	2060671
13	19.6	7.4	1.7	chr2	102619492	102619545	(139573984)	+	(GCGCC)n	Simple_repeat	1	58	(0)	2061316
300	16.4	4.3	5.6	chr2	102619870	102619940	(139573589)	C	L1MD2	LINE/L1	(6069)	478	409	2061317
43	0.0	0.0	0.0	chr2	104852965	104853001	(137340528)	+	(CA)n	Simple_repeat	1	37	(0)	2064062
30	14.0	2.6	5.0	chr2	104853225	104853302	(137340227)	+	GA-rich	Low_complexity	1	80	(0)	2064063
33	31.6	1.5	0.8	chr2	104854134	104854263	(137339266)	+	GA-rich	Low_complexity	1	132	(0)	2064065
32	3.2	0.0	0.0	chr2	104872060	104872091	(137321438)	+	(AC)n	Simple_repeat	1	32	(0)	2064083
49	2.2	0.0	0.0	chr2	105765787	105765832	(136427697)	+	(GT)n	Simple_repeat	1	46	(0)	2065461
379	23.2	9.5	3.1	chr2	105765883	105765980	(136427549)	+	MLT1E1A	LTR/ERVL-MaLR	560	664	(16)	2065462
2402	7.7	0.0	0.0	chr2	105784967	105785263	(136408266)	C	AluY	SINE/Alu	(0)	311	15	2065492
2488	6.0	3.0	1.7	chr2	108533411	108533709	(133659820)	C	AluSp	SINE/Alu	(10)	303	1	2069391
635	25.3	11.8	9.1	chr2	109031129	109031480	(133162049)	C	MLT1A1	LTR/ERVL-MaLR	(3)	405	43	2070165
512	20.4	0.0	1.7	chr2	109211299	109211413	(132982116)	+	CR1-16_AMi	LINE/CR1	511	623	(228)	2070443
1111	16.2	12.6	0.9	chr2	110687734	110687964	(131505565)	+	LTR9B	LTR/ERV1	1	262	(404)	2072574
2090	20.8	3.7	9.0	chr2	110687965	110688615	(131504914)	+	LTR6A	LTR/ERV1	1	564	(0)	2072575
2274	12.7	0.0	0.9	chr2	111703047	111703361	(130490168)	+	AluJo	SINE/Alu	1	312	(0)	2073898
229	31.9	9.0	0.0	chr2	111923263	111923353	(130270176)	C	L2b	LINE/L2	(12)	3363	3264	2074265
180	28.5	8.9	3.1	chr2	112181575	112181701	(130011828)	+	L2b	LINE/L2	3213	3347	(28)	2074679
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
11	20.4	0.0	9.3	chr2	115161404	115161457	(127032072)	+	G-rich	Low_complexity	1	54	(0)	2079464
270	35.1	11.2	1.6	chr2	116959018	116959211	(125234318)	+	L2c	LINE/L2	3017	3231	(156)	2081712
220	27.6	23.7	0.7	chr2	118169510	118169655	(124023874)	+	MIRb	SINE/MIR	19	208	(60)	2083285
1042	17.9	2.3	2.8	chr2	118169657	118169874	(124023655)	+	MER20	DNA/hAT-Charlie	3	219	(0)	2083286
866	30.1	10.4	1.8	chr2	118295590	118296029	(123897500)	+	LTR33C	LTR/ERVL	5	482	(147)	2083501
13	23.7	0.0	4.2	chr2	119157228	119157275	(123036254)	+	G-rich	Low_complexity	1	48	(0)	2084797
14	14.2	3.2	0.0	chr2	119240736	119240766	(122952763)	+	(AGGC)n	Simple_repeat	1	32	(0)	2084973
251	31.7	8.5	6.9	chr2	119523840	119524012	(122669517)	+	MamRep1879	DNA/hAT-Tip100?	5	180	(36)	2085508
212	29.1	12.0	3.1	chr2	120395831	120395972	(121797557)	+	MIRb	SINE/MIR	65	223	(45)	2086896
205	21.9	8.9	4.7	chr2	120396062	120396147	(121797382)	C	MamTip2	DNA/hAT-Tip100	(187)	118	29	2086897
182	25.0	7.1	0.0	chr2	120465812	120465863	(121727666)	+	MIR3	SINE/MIR	126	181	(27)	2087010
5377	20.0	2.1	1.7	chr2	120543488	120544523	(121649006)	C	MER45B	DNA/hAT-Tip100	(0)	1040	1	2087150
15	18.4	2.7	0.0	chr2	120736788	120736824	(121456705)	+	(CCTT)n	Simple_repeat	1	38	(0)	2087494
15	35.9	1.0	2.9	chr2	120736815	120736915	(121456614)	+	(CCTCC)n	Simple_repeat	1	102	(0)	2087495
22	24.6	3.6	5.2	chr2	120867792	120867902	(121325627)	+	GA-rich	Low_complexity	1	115	(0)	2087683
14	13.1	0.0	0.0	chr2	120958946	120958971	(121234558)	+	(TGAG)n	Simple_repeat	1	26	(0)	2087808
19	16.8	5.3	8.0	chr2	121080208	121080302	(121113227)	+	(GGAGTCT)n	Simple_repeat	1	100	(0)	2088011
249	36.5	5.0	0.0	chr2	121080492	121080587	(121112942)	+	L2a	LINE/L2	3324	3424	(2)	2088012
1945	13.9	10.6	9.1	chr2	121684740	121685157	(120508372)	C	HERVE-int	LTR/ERV1	(3459)	4354	3930	2089114
3792	18.6	4.5	6.6	chr2	121685129	121686558	(120506971)	C	HERV3-int	LTR/ERV1	(6945)	1481	1	2089112
514	25.6	7.9	2.8	chr2	122105892	122106072	(120087457)	+	MER103C	DNA/hAT-Charlie	2	192	(105)	2089915
81	2.6	0.0	0.0	chr2	122663904	122663983	(119529546)	+	(TGC)n	Simple_repeat	1	80	(0)	2090725
13602	10.4	0.8	0.1	chr2	123686372	123688185	(118505344)	+	HERVS71-int	LTR/ERV1	1410	3236	(5742)	2092093
1272	28.4	9.9	0.2	chr2	124107006	124107425	(118086104)	C	LTR33C	LTR/ERVL	(154)	475	11	2092649
1403	21.6	4.9	4.9	chr2	124480986	124481350	(117712179)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2093207
966	16.7	28.6	1.6	chr2	124995079	124995443	(117198086)	+	LTR29	LTR/ERV1	28	516	(106)	2094036
3905	16.8	1.5	3.5	chr2	124995444	124996185	(117197344)	C	LTR8A	LTR/ERV1	(0)	727	1	2094037
2337	10.9	0.3	0.0	chr2	125181034	125181345	(117012184)	+	AluSp	SINE/Alu	1	313	(0)	2094283
251	33.6	7.0	5.0	chr2	126576919	126577140	(115616389)	+	HAL1ME	LINE/L1	14	240	(2225)	2096104
280	30.1	3.1	2.8	chr2	126777368	126777506	(115416023)	+	MIR3	SINE/MIR	65	201	(7)	2096384
4083	16.4	7.1	2.7	chr2	127461952	127463222	(114730307)	+	L1MB7	LINE/L1	4848	6183	(1)	2097483
3683	7.9	0.0	9.7	chr2	128215923	128216497	(113977032)	+	LTR12F	LTR/ERV1	1	519	(0)	2098886
777	13.7	9.9	4.3	chr2	128216498	128216621	(113976908)	+	AluJr4	SINE/Alu	170	292	(20)	2098885
582	19.0	6.0	12.8	chr2	128216622	128216799	(113976730)	C	L1M4	LINE/L1	(708)	5471	5314	2098883
512	27.7	5.2	1.2	chr2	128646624	128646791	(113546738)	C	MIRb	SINE/MIR	(38)	230	56	2099524
197	29.3	7.5	2.9	chr2	128646954	128647055	(113546474)	+	L2b	LINE/L2	3240	3346	(29)	2099525
296	31.2	9.2	3.5	chr2	128794922	128795147	(113398382)	C	MIRb	SINE/MIR	(2)	266	27	2099707
2145	10.4	0.7	0.3	chr2	130288036	130288332	(111905197)	C	AluSc8	SINE/Alu	(13)	298	1	2101600
13	19.3	2.2	4.3	chr2	130356489	130356533	(111836996)	+	(GCGG)n	Simple_repeat	1	46	(0)	2101707
12	17.5	3.1	0.0	chr2	130356676	130356707	(111836822)	+	(TCCGCG)n	Simple_repeat	1	33	(0)	2101708
299	30.6	10.5	0.7	chr2	130356708	130356864	(111836665)	+	MIRb	SINE/MIR	55	236	(32)	2101709
181	21.7	2.1	6.1	chr2	131491385	131491433	(110702096)	+	MamRTE1	LINE/RTE-BovB	1494	1540	(2272)	2103369
11	21.6	0.0	4.9	chr2	132489403	132489443	(109704086)	+	G-rich	Low_complexity	1	41	(0)	2104663
1136	31.2	8.9	2.5	chr2	137508758	137509200	(104684329)	+	FordPrefect_a	DNA/hAT-Tip100	35	508	(0)	2112188
1175	7.6	0.0	0.0	chr2	138236978	138237135	(103956394)	C	L1PA12	LINE/L1	(0)	6163	6006	2113155
3916	16.5	3.9	1.6	chr2	138237136	138237162	(103956367)	+	MER50	LTR/ERV1	1	27	(707)	2113156
28	0.0	0.0	0.0	chr2	138237163	138237189	(103956340)	+	(GGGCA)n	Simple_repeat	1	27	(0)	2113157
3916	16.5	3.9	1.6	chr2	138237190	138237317	(103956212)	+	MER50	LTR/ERV1	28	171	(563)	2113156
2373	10.7	0.3	0.3	chr2	138237318	138237625	(103955904)	+	AluSg	SINE/Alu	1	308	(2)	2113158
1223	28.6	8.4	5.8	chr2	138291344	138291944	(103901585)	C	Charlie2b	DNA/hAT-Charlie	(2157)	625	8	2113232
346	38.0	11.4	2.3	chr2	138292020	138292418	(103901111)	C	L2	LINE/L2	(436)	2983	2544	2113235
13	23.8	2.2	2.1	chr2	138780391	138780436	(103413093)	+	G-rich	Low_complexity	1	47	(0)	2113952
257	26.1	10.5	9.5	chr2	144240922	144241090	(97952439)	+	MER5B	DNA/hAT-Charlie	2	172	(6)	2121131
963	14.0	5.8	2.7	chr2	144241104	144241286	(97952243)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2121132
306	29.7	9.8	0.0	chr2	144241287	144241387	(97952142)	+	MIRb	SINE/MIR	37	148	(120)	2121133
579	28.4	12.6	1.4	chr2	144241397	144241607	(97951922)	C	MIRb	SINE/MIR	(8)	260	23	2121134
34	5.3	0.0	0.0	chr2	147844401	147844440	(94349089)	+	(GCC)n	Simple_repeat	1	40	(0)	2125791
17	9.4	5.7	0.0	chr2	147844537	147844571	(94348958)	+	(GAGCCCG)n	Simple_repeat	1	37	(0)	2125792
36	19.1	3.3	1.1	chr2	147844582	147844672	(94348857)	+	(GCC)n	Simple_repeat	1	94	(0)	2125793
40	0.0	0.0	0.0	chr2	149038942	149038978	(93154551)	+	(CGCGGGGC)n	Simple_repeat	1	37	(0)	2127513
242	21.9	4.5	0.0	chr2	149588088	149588151	(92605378)	+	L2b	LINE/L2	3303	3369	(6)	2128268
4951	19.9	5.0	7.7	chr2	149588219	149589805	(92603724)	C	L1MC3	LINE/L1	(176)	7706	6117	2128269
1278	28.3	10.6	4.9	chr2	149819381	149819867	(92373662)	C	LTR33A_	LTR/ERVL	(6)	525	8	2128590
19	27.4	0.0	1.8	chr2	150487475	150487529	(91706000)	+	(AT)n	Simple_repeat	1	55	(0)	2129423
743	30.1	10.0	7.8	chr2	155636538	155637248	(86556281)	C	L1M7	LINE/L1	(5103)	1115	392	2136407
20	16.4	0.0	0.0	chr2	156332922	156332955	(85860574)	+	(T)n	Simple_repeat	1	34	(0)	2137288
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
2010	13.6	1.0	0.7	chr2	158739903	158740203	(83453326)	+	AluJr	SINE/Alu	1	302	(10)	2140486
21	4.2	0.0	0.0	chr2	159712088	159712112	(82481417)	+	(A)n	Simple_repeat	1	25	(0)	2142018
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
4273	18.9	7.1	7.2	chr2	159737893	159739347	(82454182)	C	MER52A	LTR/ERV1	(12)	1743	1	2142071
14	11.9	8.1	0.0	chr2	162344146	162344182	(79849347)	+	(CCTGCA)n	Simple_repeat	1	40	(0)	2145594
423	28.3	14.2	0.0	chr2	165624808	165624994	(76568535)	C	MIRb	SINE/MIR	(48)	220	3	2149905
308	25.1	12.2	1.0	chr2	165625056	165625170	(76568359)	+	MIRb	SINE/MIR	43	172	(58)	2149906
2376	14.2	0.8	0.3	chr2	166436161	166436533	(75756996)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2151021
10129	11.5	3.5	0.6	chr2	166436534	166438066	(75755463)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2151021
1585	17.7	7.9	4.8	chr2	167716327	167717064	(74476465)	C	L1MDa	LINE/L1	(3640)	2897	2128	2152555
647	24.5	11.0	5.8	chr2	168355019	168355412	(73838117)	+	LTR33	LTR/ERVL	83	499	(16)	2153443
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
2127	16.0	0.0	1.3	chr2	168793325	168793631	(73399898)	+	AluJb	SINE/Alu	1	303	(9)	2154078
2212	12.5	0.3	0.6	chr2	169726853	169727165	(72466364)	+	AluSz6	SINE/Alu	1	312	(0)	2155481
294	23.2	1.1	3.4	chr2	169727167	169727255	(72466274)	C	L2a	LINE/L2	(307)	3119	3033	2155476
224	32.6	5.0	1.0	chr2	169727282	169727377	(72466152)	C	L2a	LINE/L2	(481)	2938	2839	2155476
20373	13.8	3.0	2.2	chr2	170253896	170260728	(71932801)	+	L1PA16	LINE/L1	1	8160	(1)	2156362
36	0.0	0.0	0.0	chr2	170594828	170594858	(71598671)	+	(CA)n	Simple_repeat	1	31	(0)	2156898
444	36.3	11.0	4.1	chr2	170685311	170685594	(71507935)	+	L1M5	LINE/L1	4642	4955	(1191)	2157042
1736	21.5	9.7	1.7	chr2	170685595	170686067	(71507462)	C	LTR40a	LTR/ERVL	(0)	519	5	2157043
3385	26.7	3.1	1.4	chr2	171440982	171441916	(70751613)	C	L1M4b	LINE/L1	(5912)	955	4	2158435
16	19.5	1.9	7.3	chr2	172000139	172000192	(70193337)	+	(AC)n	Simple_repeat	1	55	(0)	2159420
13	12.5	0.0	3.6	chr2	172087240	172087267	(70106262)	+	(CCT)n	Simple_repeat	1	28	(0)	2159583
265	21.6	17.0	0.0	chr2	172215661	172215748	(69977781)	+	LTR33A_	LTR/ERVL	3	108	(423)	2159813
521	25.7	13.4	0.4	chr2	172215764	172216058	(69977471)	+	LTR33A_	LTR/ERVL	148	531	(0)	2159813
769	31.4	4.1	0.0	chr2	172726742	172727024	(69466505)	+	L2a	LINE/L2	3116	3410	(16)	2160595
310	27.0	13.4	2.8	chr2	172846865	172847043	(69346486)	+	L2c	LINE/L2	3187	3387	(0)	2160782
2903	9.3	2.3	3.7	chr2	173302561	173302900	(68890629)	C	MER4E	LTR/ERV1	(0)	766	429	2161436
2518	8.5	0.0	0.0	chr2	173302901	173303205	(68890324)	+	AluSx	SINE/Alu	1	305	(7)	2161437
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
13	20.9	0.0	2.8	chr2	173401713	173401748	(68791781)	+	(TTC)n	Simple_repeat	1	36	(0)	2161623
16	23.5	5.5	2.6	chr2	173965785	173965857	(68227672)	+	(GCTGCC)n	Simple_repeat	1	77	(0)	2162466
14	16.2	0.0	0.0	chr2	173965834	173965861	(68227668)	+	(GCT)n	Simple_repeat	1	28	(0)	2162467
30	16.0	1.3	5.1	chr2	174328198	174328275	(67865254)	+	GA-rich	Low_complexity	1	79	(0)	2163095
20	9.4	0.0	2.7	chr2	174331234	174331270	(67862259)	+	(ACCCC)n	Simple_repeat	1	37	(0)	2163098
31	7.3	3.2	4.6	chr2	174332970	174333032	(67860497)	+	(CTTCT)n	Simple_repeat	1	65	(0)	2163100
18	31.8	0.0	0.0	chr2	174336898	174336959	(67856570)	+	(CGC)n	Simple_repeat	1	62	(0)	2163103
293	33.3	5.4	1.4	chr2	174396005	174396147	(67797382)	+	MIRc	SINE/MIR	73	221	(47)	2163187
203	34.7	6.2	0.0	chr2	176424137	176424211	(65769318)	+	L2c	LINE/L2	3308	3387	(0)	2166100
12	4.3	8.3	0.0	chr2	176424212	176424235	(65769294)	+	(GAAT)n	Simple_repeat	1	26	(0)	2166101
294	28.4	9.3	7.3	chr2	176924553	176924951	(65268578)	+	Tigger13a	DNA/TcMar-Tigger	273	680	(91)	2166819
460	27.2	3.1	14.6	chr2	176925248	176925501	(65268028)	C	MLT1L	LTR/ERVL-MaLR	(338)	272	49	2166820
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
2391	12.8	1.1	0.0	chr2	185522307	185522657	(56670872)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2177912
10684	10.4	1.1	2.3	chr2	185522658	185523940	(56669589)	+	THE1A-int	LTR/ERVL-MaLR	1	1282	(298)	2177912
17	22.9	7.0	2.6	chr2	186726999	186727069	(55466460)	+	(TC)n	Simple_repeat	1	76	(0)	2179494
16	8.1	0.0	0.0	chr2	188323250	188323275	(53870254)	+	(ATTTT)n	Simple_repeat	1	26	(0)	2181504
1834	13.6	9.3	1.8	chr2	188455322	188455657	(53737872)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2181675
11201	10.5	0.1	1.6	chr2	188455658	188457258	(53736271)	+	THE1B-int	LTR/ERVL-MaLR	1	1576	(4)	2181675
2412	10.0	0.8	0.8	chr2	188558161	188558513	(53635016)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	2181787
7670	8.9	0.9	0.1	chr2	188558516	188559555	(53633974)	+	THE1A-int	LTR/ERVL-MaLR	1	1048	(532)	2181788
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
510	28.0	12.5	0.6	chr2	190604521	190604703	(51588826)	C	MIRb	SINE/MIR	(58)	210	3	2184602
499	35.7	6.2	4.0	chr2	190699109	190699537	(51493992)	C	L2	LINE/L2	(938)	2481	2043	2184740
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
279	26.2	2.7	2.7	chr2	191290965	191291074	(50902455)	+	MER5B	DNA/hAT-Charlie	1	110	(68)	2185650
227	28.3	8.2	6.2	chr2	191928005	191928279	(50265250)	C	CR1_Mam	LINE/CR1	(1803)	401	121	2186590
985	28.4	10.1	2.8	chr2	193301395	193301861	(48891668)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2188271
1824	16.6	12.8	1.1	chr2	195304352	195304722	(46888807)	+	MSTA	LTR/ERVL-MaLR	1	421	(7)	2190709
13	13.2	6.7	4.2	chr2	196593438	196593482	(45600047)	+	(CCGCGGTG)n	Simple_repeat	1	48	(0)	2192634
241	21.7	13.6	4.4	chr2	197520112	197520184	(44673345)	C	L1ME3Cz	LINE/L1	(238)	759	678	2194205
1793	8.1	17.5	0.4	chr2	197520185	197520430	(44673099)	C	AluY	SINE/Alu	(14)	297	1	2194206
241	21.7	13.6	4.4	chr2	197520431	197520515	(44673014)	C	L1ME3Cz	LINE/L1	(320)	677	584	2194205
251	27.1	7.6	0.0	chr2	197598670	197598754	(44594775)	+	MER5A1	DNA/hAT-Charlie	72	163	(3)	2194344
17	12.6	2.9	0.0	chr2	197673428	197673462	(44520067)	+	A-rich	Low_complexity	1	36	(0)	2194463
12	11.6	3.3	3.2	chr2	199458751	199458780	(42734749)	+	(CCCA)n	Simple_repeat	1	31	(0)	2196849
2027	11.8	2.5	0.0	chr2	199567168	199567439	(42626090)	C	AluSz	SINE/Alu	(33)	279	1	2197028
17	23.1	0.0	3.7	chr2	201116576	201116629	(41076900)	+	(GCCCC)n	Simple_repeat	1	54	(0)	2199569
355	32.9	7.2	1.9	chr2	201119211	201119368	(41074161)	C	L2b	LINE/L2	(8)	3367	3201	2199571
382	14.2	4.1	2.4	chr2	201232110	201232223	(40961306)	C	LTR41C	LTR/ERVL	(6)	752	609	2199793
825	20.3	12.5	5.8	chr2	201232239	201232551	(40960978)	C	LTR41C	LTR/ERVL	(364)	337	1	2199793
320	25.9	8.7	0.8	chr2	201470807	201470923	(40722606)	C	MLT1N2	LTR/ERVL-MaLR	(6)	556	430	2200095
4851	15.5	2.3	0.4	chr2	201504310	201505085	(40688444)	+	MER54B	LTR/ERVL	1	791	(2)	2200148
9433	20.0	4.6	1.2	chr2	201558302	201560145	(40633384)	+	L1M2c	LINE/L1	6	1920	(4869)	2200225
209	34.6	5.1	0.8	chr2	201956627	201956757	(40236772)	+	L2	LINE/L2	734	870	(2549)	2200919
1276	24.3	4.3	1.0	chr2	201966413	201966763	(40226766)	C	L1ME3	LINE/L1	(30)	6132	5769	2200938
1261	17.8	2.8	7.4	chr2	201975150	201975447	(40218082)	C	MER58B	DNA/hAT-Charlie	(0)	341	58	2200950
188	27.5	13.8	0.0	chr2	201975463	201975531	(40217998)	+	MIRb	SINE/MIR	62	141	(127)	2200951
260	25.0	1.8	0.0	chr2	201975707	201975762	(40217767)	C	L2b	LINE/L2	(2)	3424	3368	2200952
289	20.5	1.7	0.0	chr2	201975760	201975829	(40217700)	C	L2b	LINE/L2	(242)	3184	3110	2200952
369	27.4	13.6	1.4	chr2	201975862	201976009	(40217520)	C	MIRb	SINE/MIR	(76)	192	20	2200953
257	25.4	1.6	0.0	chr2	201975989	201976051	(40217478)	+	MIRb	SINE/MIR	55	118	(150)	2200954
14	11.6	4.9	4.7	chr2	202023570	202023610	(40169919)	+	(TACCCC)n	Simple_repeat	1	43	(0)	2201055
3681	12.1	8.4	1.4	chr2	202418404	202419132	(39774397)	C	MER4D1	LTR/ERV1	(0)	900	1	2201957
12	29.1	3.8	3.6	chr2	202635947	202635975	(39557554)	+	(GCCCC)n	Simple_repeat	1	57	(26)	2202416
14	22.1	0.0	2.5	chr2	202635976	202636015	(39557514)	+	(CCCG)n	Simple_repeat	1	40	(0)	2202417
12	29.1	3.8	3.6	chr2	202636016	202636026	(39557503)	+	(GCCCC)n	Simple_repeat	58	83	(0)	2202416
12	5.6	0.0	0.0	chr2	203328406	203328424	(38865105)	+	(CCG)n	Simple_repeat	1	19	(0)	2203791
17	18.9	0.0	0.0	chr2	203328488	203328523	(38865006)	+	GA-rich	Low_complexity	1	36	(0)	2203792
13	17.7	2.5	2.4	chr2	203328673	203328712	(38864817)	+	(GCCGCGG)n	Simple_repeat	1	41	(0)	2203793
12	20.0	6.2	2.0	chr2	203328871	203328918	(38864611)	+	(CCCGCC)n	Simple_repeat	1	51	(0)	2203794
577	23.6	0.6	0.0	chr2	204546303	204546459	(37647070)	+	MER5A1	DNA/hAT-Charlie	9	166	(0)	2205788
12	19.3	4.7	2.2	chr2	205686012	205686054	(36507475)	+	(CCCCT)n	Simple_repeat	1	45	(0)	2207286
309	22.7	8.4	5.4	chr2	205954474	205954622	(36238907)	+	L1ME4a	LINE/L1	5966	6119	(5)	2207681
306	22.7	11.6	2.9	chr2	205954680	205954806	(36238723)	+	HAL1ME	LINE/L1	1194	1324	(1141)	2207677
2444	10.7	0.3	0.0	chr2	206010797	206011096	(36182433)	+	AluSq2	SINE/Alu	1	301	(12)	2207783
464	28.0	2.3	4.0	chr2	206435962	206436136	(35757393)	+	MIR3	SINE/MIR	32	203	(5)	2208628
276	41.1	2.8	2.0	chr2	206764539	206764786	(35428743)	+	L2c	LINE/L2	2713	2962	(457)	2209083
301	30.9	8.5	4.7	chr2	206764809	206765136	(35428393)	+	L2c	LINE/L2	3062	3422	(4)	2209083
441	31.8	3.8	5.3	chr2	206993677	206993870	(35199659)	+	MIR3	SINE/MIR	9	195	(13)	2209409
2006	13.6	14.8	2.4	chr2	206995111	206995266	(35198263)	+	MSTB1	LTR/ERVL-MaLR	2	203	(229)	2209411
12	11.3	6.7	6.2	chr2	207092052	207092096	(35101433)	+	(TTCCT)n	Simple_repeat	1	48	(0)	2209532
1556	5.7	13.0	6.2	chr2	207504242	207504484	(34689045)	+	L1PA13	LINE/L1	5901	6162	(1)	2210131
1673	25.8	9.4	4.5	chr2	207511861	207512752	(34680777)	C	L2a	LINE/L2	(8)	3418	2464	2210149
400	31.3	12.3	4.3	chr2	207717372	207717788	(34475741)	C	L2a	LINE/L2	(12)	3414	2960	2210559
548	31.2	9.4	2.5	chr2	209236373	209236609	(32956920)	+	LTR33	LTR/ERVL	26	280	(235)	2212783
4333	19.1	9.8	2.9	chr2	209306971	209307949	(32885580)	C	MER52A	LTR/ERV1	(476)	1279	204	2212847
937	14.7	14.9	0.7	chr2	209307973	209308193	(32885336)	C	MSTA	LTR/ERVL-MaLR	(122)	259	1	2212846
2478	8.5	6.1	0.8	chr2	210055000	210055354	(32138175)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2213851
4900	12.8	4.8	7.7	chr2	210055355	210056256	(32137273)	+	THE1C-int	LTR/ERVL-MaLR	1	875	(705)	2213851
8687	18.6	2.3	0.8	chr2	211228163	211229715	(30963814)	+	L1M1	LINE/L1	12	1589	(5976)	2215319
233	31.5	0.9	2.6	chr2	211828990	211829103	(30364426)	C	L1ME5	LINE/L1	(16)	6178	6067	2216120
4204	14.7	2.2	0.3	chr2	213213981	213214641	(28978888)	C	MER57-int	LTR/ERV1	(6863)	674	1	2217959
494	26.4	4.8	3.8	chr2	216807661	216807845	(25385684)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	2223466
332	24.7	15.9	4.4	chr2	217313989	217314170	(24879359)	C	L3b	LINE/CR1	(89)	5143	4937	2224218
13	25.0	5.3	3.8	chr2	218292381	218292456	(23901073)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	2225782
13	15.9	0.0	0.0	chr2	218292519	218292546	(23900983)	+	G-rich	Low_complexity	1	28	(0)	2225783
13	26.4	4.0	0.0	chr2	218324087	218324136	(23869393)	+	(CCCT)n	Simple_repeat	1	52	(0)	2225873
13	21.7	0.0	2.6	chr2	218367999	218368037	(23825492)	+	G-rich	Low_complexity	1	39	(0)	2225962
385	29.1	10.7	5.0	chr2	218407273	218407572	(23785957)	C	L2c	LINE/L2	(10)	3377	3059	2226048
296	27.6	10.7	2.9	chr2	219001263	219001400	(23192129)	C	MIR3	SINE/MIR	(50)	158	9	2227181
13	14.5	3.2	0.0	chr2	219001478	219001508	(23192021)	+	G-rich	Low_complexity	1	32	(0)	2227182
18	13.2	0.0	6.4	chr2	219001558	219001604	(23191925)	+	(CGGTGG)n	Simple_repeat	1	47	(0)	2227183
2170	11.0	0.0	0.0	chr2	219115840	219116121	(23077408)	+	AluSc	SINE/Alu	1	282	(27)	2227364
11	19.1	5.9	3.7	chr2	219294717	219294767	(22898762)	+	G-rich	Low_complexity	1	54	(0)	2227662
12	12.6	2.5	7.3	chr2	219294869	219294908	(22898621)	+	(AGGCCC)n	Simple_repeat	1	41	(0)	2227663
14	12.8	5.9	0.0	chr2	219387809	219387842	(22805687)	+	(CGCCC)n	Simple_repeat	1	36	(0)	2227845
12	17.5	9.4	1.7	chr2	219418401	219418453	(22775076)	+	(CCTG)n	Simple_repeat	1	58	(0)	2227915
13	15.4	0.0	7.1	chr2	219418646	219418687	(22774842)	+	G-rich	Low_complexity	1	42	(0)	2227916
312	31.1	12.1	4.1	chr2	219433956	219434290	(22759239)	+	L2c	LINE/L2	2767	3132	(255)	2227947
328	23.8	11.9	1.6	chr2	219434275	219434402	(22759127)	C	MIRb	SINE/MIR	(117)	151	9	2227948
13	20.8	4.3	2.1	chr2	219486494	219486539	(22706990)	+	GA-rich	Low_complexity	1	48	(0)	2228019
180	34.1	4.5	7.3	chr2	219486798	219486933	(22706596)	+	MamRTE1	LINE/RTE-BovB	2239	2370	(1442)	2228020
1126	11.7	3.0	1.9	chr2	219738669	219738830	(22454699)	+	AluSx1	SINE/Alu	134	297	(15)	2228409
347	23.4	7.5	13.3	chr2	219738969	219739111	(22454418)	C	MLT1B	LTR/ERVL-MaLR	(256)	134	1	2228410
533	23.8	7.5	2.8	chr2	219740638	219740814	(22452715)	C	MIR3	SINE/MIR	(13)	195	10	2228415
410	29.8	2.1	7.8	chr2	221289913	221290116	(20903413)	C	MIRc	SINE/MIR	(75)	193	2	2230856
2390	12.2	0.0	0.3	chr2	226810262	226810565	(15382964)	+	AluSx1	SINE/Alu	5	307	(5)	2239486
2313	18.1	2.8	4.8	chr2	226810566	226810792	(15382737)	C	Tigger2a	DNA/TcMar-Tigger	(221)	213	1	2239485
456	23.9	11.0	3.9	chr2	229781351	229781556	(12411973)	C	MIR	SINE/MIR	(6)	256	31	2244089
744	31.1	7.6	3.9	chr2	230674917	230675384	(11518145)	+	MamGypLTR3a	LTR/Gypsy	241	727	(254)	2245496
733	29.8	10.2	4.9	chr2	230849681	230850522	(11343007)	C	L2a	LINE/L2	(0)	3426	2472	2245791
778	14.1	8.9	11.3	chr2	231015197	231015381	(11178148)	C	AluSx3	SINE/Alu	(131)	180	1	2246073
748	26.1	0.9	3.2	chr2	231320950	231321176	(10872353)	+	MIRb	SINE/MIR	1	232	(36)	2246662
1185	21.7	3.5	1.8	chr2	231410660	231410941	(10782588)	C	MamGypLTR3a	LTR/Gypsy	(648)	333	47	2246804
294	28.8	8.5	6.1	chr2	231612007	231612161	(10581368)	C	MIR	SINE/MIR	(0)	268	107	2247261
358	28.3	2.8	0.0	chr2	231612180	231612285	(10581244)	C	MamRep1894	DNA/hAT	(11)	112	4	2247262
185	29.8	3.4	0.0	chr2	231612392	231612448	(10581081)	+	MIRc	SINE/MIR	201	259	(9)	2247263
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
2130	11.0	0.3	3.2	chr2	231673784	231674091	(10519438)	C	AluSx1	SINE/Alu	(13)	299	1	2247413
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
263	32.1	9.3	6.6	chr2	231961034	231961334	(10232195)	+	L2c	LINE/L2	3034	3386	(1)	2247971
17	26.7	0.0	1.8	chr2	232386572	232386627	(9806902)	+	(CCCTC)n	Simple_repeat	1	56	(0)	2248577
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
15	18.4	4.7	0.0	chr2	232697258	232697300	(9496229)	+	G-rich	Low_complexity	1	45	(0)	2249158
807	27.2	13.1	3.7	chr2	232698920	232699354	(9494175)	C	L2a	LINE/L2	(0)	3426	2945	2249159
18	0.0	0.0	0.0	chr2	233051605	233051627	(9141902)	+	(TTTG)n	Simple_repeat	1	23	(0)	2249805
214	34.5	1.8	3.5	chr2	233275592	233275705	(8917824)	+	L3	LINE/CR1	3987	4098	(1)	2250245
351	28.1	10.6	5.0	chr2	233353838	233354058	(8839471)	+	L2c	LINE/L2	2925	3159	(228)	2250389
2490	27.1	17.6	2.0	chr2	233501201	233502211	(8691318)	C	L2	LINE/L2	(346)	3073	1872	2250593
823	17.9	1.8	1.8	chr2	233913044	233913208	(8280321)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	2251118
272	26.3	9.1	4.5	chr2	233929427	233929605	(8263924)	C	LTR105_Mam	LTR/ERVL	(267)	333	146	2251141
673	31.7	25.4	1.3	chr2	234809669	234810312	(7383217)	+	L2a	LINE/L2	2574	3382	(44)	2252567
20	0.0	0.0	0.0	chr2	234816703	234816724	(7376805)	+	(T)n	Simple_repeat	1	22	(0)	2252580
225	30.2	3.0	2.0	chr2	235550476	235550573	(6642956)	+	MER5A	DNA/hAT-Charlie	30	128	(61)	2253800
26	0.0	3.0	2.9	chr2	235669488	235669520	(6524009)	+	(CGC)n	Simple_repeat	1	34	(0)	2253979
14	21.5	6.6	1.5	chr2	235669548	235669608	(6523921)	+	(GGCCCGC)n	Simple_repeat	1	65	(0)	2253980
201	32.3	10.9	5.6	chr2	235792679	235793144	(6400385)	C	L2	LINE/L2	(884)	2535	2042	2254129
180	26.8	6.7	0.0	chr2	235793301	235793356	(6400173)	C	MIRb	SINE/MIR	(22)	246	187	2254130
571	29.5	8.6	2.4	chr2	237210591	237210955	(4982574)	C	L2a	LINE/L2	(0)	3426	2993	2256082
2060	19.3	5.2	7.8	chr2	237375083	237375511	(4818018)	+	MLT1D	LTR/ERVL-MaLR	4	439	(66)	2256276
372	28.3	5.8	4.5	chr2	237548001	237548214	(4645315)	C	MIRc	SINE/MIR	(27)	241	23	2256501
14	17.9	5.6	3.5	chr2	237583653	237583706	(4609823)	+	(CCACAGC)n	Simple_repeat	1	57	(0)	2256551
388	16.4	0.0	0.0	chr2	237675001	237675073	(4518456)	+	LTR50	LTR/ERVL	211	283	(512)	2256703
264	22.2	1.6	0.0	chr2	237675288	237675350	(4518179)	+	LTR50	LTR/ERVL	732	795	(0)	2256703
954	15.9	17.8	10.0	chr2	237798089	237798315	(4395214)	C	MER96B	DNA/hAT-Tip100	(148)	269	3	2256861
366	22.3	8.8	1.0	chr2	237967798	237967901	(4225628)	+	MIR3	SINE/MIR	41	153	(55)	2257159
305	34.3	6.3	3.2	chr2	238061407	238061683	(4131846)	C	L2	LINE/L2	(438)	2981	2696	2257311
20	7.0	0.0	0.0	chr2	238320562	238320591	(3872938)	+	(GGC)n	Simple_repeat	1	30	(0)	2257651
62	26.5	5.0	1.5	chr2	238320796	238321053	(3872476)	+	G-rich	Low_complexity	1	271	(0)	2257652
761	16.5	4.0	0.9	chr2	238880042	238881652	(3311877)	+	(TTAGTA)n	Simple_repeat	1	1676	(0)	2258347
78	36.6	3.4	1.0	chr2	239061126	239061598	(3131931)	+	(GT)n	Simple_repeat	1	489	(0)	2258561
260	22.9	8.3	1.6	chr2	240203058	240203181	(1990348)	C	L2c	LINE/L2	(178)	3209	3077	2259810
1575	25.3	6.7	0.5	chr2	240214369	240214785	(1978744)	C	LTR56	LTR/ERV1	(0)	445	1	2259820
22	20.2	3.3	6.5	chr2	240435730	240435819	(1757710)	+	(CCG)n	Simple_repeat	1	93	(0)	2260045
1640	30.1	9.3	1.7	chr2	240700111	240700992	(1492537)	+	MER45R	DNA/hAT-Tip100	346	1301	(280)	2260300
13	12.5	0.0	0.0	chr2	240962484	240962509	(1231020)	+	(GGGAG)n	Simple_repeat	1	26	(0)	2260547
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
29	29.1	1.3	5.2	chr2	241218397	241218547	(974982)	+	(GGCGG)n	Simple_repeat	1	153	(0)	2260835
333	33.8	2.9	0.0	chr2	241509180	241509312	(684217)	+	MIR	SINE/MIR	89	225	(37)	2261237
1050	11.5	0.0	1.3	chr2	241686389	241686545	(506984)	+	AluJb	SINE/Alu	138	292	(20)	2261544
2219	13.9	3.9	0.0	chr2	241821397	241821791	(371738)	+	MSTA	LTR/ERVL-MaLR	4	414	(14)	2261742
1966	23.1	0.2	0.1	chr20	60221	63215	(64380952)	+	(ATTCC)n	Simple_repeat	2	3000	(0)	2262201
366	19.6	4.0	10.1	chr20	298833	298991	(64145176)	C	Tigger15a	DNA/TcMar-Tigger	(73)	642	494	2262588
472	25.6	11.3	4.2	chr20	309737	309948	(64134219)	C	MIR	SINE/MIR	(1)	261	33	2262617
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
243	27.0	2.0	4.1	chr20	367359	367456	(64076711)	+	MIRb	SINE/MIR	42	137	(93)	2262776
385	30.9	2.9	0.7	chr20	367745	367881	(64076286)	+	L2a	LINE/L2	1798	1937	(1482)	2262777
245	32.2	11.9	1.7	chr20	407651	407824	(64036343)	+	MIRb	SINE/MIR	3	196	(72)	2262880
76	16.9	4.0	1.1	chr20	407889	408064	(64036103)	+	(CCGGCC)n	Simple_repeat	1	183	(0)	2262881
1958	22.8	13.2	2.2	chr20	539679	540305	(63903862)	C	MLT1E2-int	LTR/ERVL-MaLR	(0)	1489	784	2263139
678	21.8	4.4	6.6	chr20	1118101	1118311	(63325856)	+	MIR	SINE/MIR	35	240	(22)	2264467
275	29.2	14.8	3.0	chr20	1302847	1303012	(63141155)	C	CR1_Mam	LINE/CR1	(340)	1864	1676	2264780
314	31.2	5.4	6.4	chr20	1303119	1303306	(63140861)	+	L2c	LINE/L2	2945	3133	(254)	2264781
423	27.1	1.6	0.0	chr20	1427092	1427213	(63016954)	+	L1ME4b	LINE/L1	58	181	(711)	2264988
3778	24.1	7.5	0.9	chr20	1427227	1428375	(63015792)	+	L1MD2	LINE/L1	28	1255	(5385)	2264989
195	23.8	0.0	0.0	chr20	1721061	1721102	(62723065)	C	L2b	LINE/L2	(9)	3366	3325	2265477
368	30.8	4.5	1.1	chr20	1721126	1721301	(62722866)	+	MIR3	SINE/MIR	16	198	(10)	2265478
561	28.1	1.4	0.7	chr20	1802964	1803110	(62641057)	C	MIR1_Amn	SINE/MIR	(79)	151	4	2265625
22	10.4	7.4	1.7	chr20	1803360	1803413	(62640754)	+	(CCGCT)n	Simple_repeat	1	58	(0)	2265626
668	30.9	3.5	0.0	chr20	1997265	1997516	(62446651)	C	MIR	SINE/MIR	(0)	262	2	2266067
705	24.9	2.6	4.3	chr20	2023072	2023302	(62420865)	C	MIR	SINE/MIR	(4)	258	32	2266121
16	19.2	0.0	0.0	chr20	2821823	2821852	(61622315)	+	(T)n	Simple_repeat	1	30	(0)	2267651
733	30.8	3.3	0.4	chr20	3654173	3654410	(60789757)	+	MER20B	DNA/hAT-Charlie	202	446	(337)	2269258
420	31.5	17.1	2.2	chr20	3744486	3744852	(60699315)	+	L2	LINE/L2	2637	3069	(350)	2269424
2105	11.9	1.0	0.3	chr20	3776684	3776976	(60667191)	C	AluSq	SINE/Alu	(17)	296	2	2269479
256	23.8	2.4	16.8	chr20	3776977	3777010	(60667157)	C	L1M5	LINE/L1	(517)	5606	5571	2269477
2337	27.0	8.4	5.5	chr20	4022334	4023138	(60421029)	+	HAL1	LINE/L1	4	833	(1674)	2269969
14	20.2	1.7	6.8	chr20	4172526	4172583	(60271584)	+	GA-rich	Low_complexity	1	59	(0)	2270293
444	32.3	6.8	0.0	chr20	4297955	4298118	(60146049)	C	MIRb	SINE/MIR	(89)	179	4	2270515
26	29.4	1.2	0.0	chr20	4823230	4823314	(59620853)	+	(GCGCCCT)n	Simple_repeat	1	86	(0)	2271387
18	13.7	2.4	2.3	chr20	4823488	4823529	(59620638)	+	(CCCT)n	Simple_repeat	1	43	(0)	2271388
196	30.2	21.3	1.8	chr20	4924411	4924636	(59519531)	+	L2a	LINE/L2	2643	2924	(495)	2271566
845	24.1	11.0	3.9	chr20	4924669	4924902	(59519265)	+	L2a	LINE/L2	3057	3320	(106)	2271566
521	13.4	2.4	0.0	chr20	5119169	5119250	(59324917)	+	FLAM_A	SINE/Alu	44	127	(15)	2272054
3393	17.3	5.9	5.0	chr20	6134574	6135247	(58308920)	C	MER54B	LTR/ERVL	(0)	793	114	2273939
394	33.6	4.6	10.0	chr20	9311337	9311818	(55132349)	C	LTR85c	LTR/Gypsy?	(302)	521	67	2278723
14	10.6	0.0	5.9	chr20	9839123	9839156	(54605011)	+	(GGAGCA)n	Simple_repeat	1	34	(0)	2279557
83	2.5	0.0	0.0	chr20	10034876	10034957	(54409210)	+	(GGCGGA)n	Simple_repeat	1	82	(0)	2279873
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
24	27.4	2.1	3.1	chr20	10673536	10673629	(53770538)	+	(CGC)n	Simple_repeat	1	96	(0)	2280873
16	9.7	0.0	0.0	chr20	10916420	10916441	(53527726)	+	(T)n	Simple_repeat	1	22	(0)	2281256
2142	9.4	0.0	7.6	chr20	10916622	10916949	(53527218)	C	AluSq2	SINE/Alu	(10)	303	1	2281257
12877	20.6	3.3	3.2	chr20	11598879	11601029	(52843138)	+	L1MB3	LINE/L1	4164	6311	(729)	2282211
1801	25.8	3.3	3.5	chr20	11601036	11601577	(52842590)	C	MER74B	LTR/ERVL	(6)	616	76	2282216
23	22.5	5.7	3.2	chr20	12592408	12592495	(51851672)	+	(AC)n	Simple_repeat	1	93	(0)	2283637
320	26.4	4.4	5.4	chr20	12596146	12596329	(51847838)	C	MLT1K	LTR/ERVL-MaLR	(35)	560	379	2283642
817	33.3	2.3	4.1	chr20	12596547	12596937	(51847230)	+	LTR16E1	LTR/ERVL	119	502	(36)	2283643
1202	29.6	5.6	4.3	chr20	12764058	12764940	(51679227)	+	L2a	LINE/L2	2532	3426	(0)	2283868
12	20.1	4.1	3.9	chr20	13220105	13220153	(51224014)	+	G-rich	Low_complexity	1	51	(0)	2284565
21	14.5	0.0	0.0	chr20	13221797	13221834	(51222333)	+	(GCT)n	Simple_repeat	1	38	(0)	2284567
2367	9.3	0.3	0.0	chr20	13233315	13233614	(51210553)	+	AluSp	SINE/Alu	2	302	(11)	2284584
1997	21.4	8.9	0.4	chr20	13237210	13237724	(51206443)	+	L1ME3A	LINE/L1	5610	6172	(1)	2284591
1313	19.7	3.6	2.1	chr20	13639439	13639677	(50804490)	+	Charlie1a	DNA/hAT-Charlie	1072	1321	(134)	2285134
740	18.6	5.8	11.1	chr20	17520077	17520275	(46923892)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	2291018
288	26.0	6.4	7.0	chr20	18496407	18496563	(45947604)	+	L1ME3F	LINE/L1	5880	6035	(208)	2292770
2894	17.8	20.6	2.3	chr20	19770699	19771401	(44672766)	C	MER21B	LTR/ERVL	(3)	865	1	2294601
238	29.8	8.6	6.0	chr20	19771402	19771543	(44672624)	+	L2	LINE/L2	1153	1296	(2123)	2294600
1500	14.1	12.3	5.7	chr20	20267632	20267948	(44176219)	C	MER61A	LTR/ERV1	(0)	341	1	2295408
419	22.6	5.0	0.0	chr20	20991632	20991746	(43452421)	C	LTR16C	LTR/ERVL	(11)	478	358	2296431
409	30.8	6.4	9.4	chr20	21092820	21093063	(43351104)	C	MIRb	SINE/MIR	(12)	256	21	2296592
1280	21.1	9.0	2.6	chr20	21180737	21181038	(43263129)	+	MLT1G	LTR/ERVL-MaLR	269	591	(0)	2296718
18	9.7	3.0	0.0	chr20	21396154	21396186	(43047981)	+	(GCG)n	Simple_repeat	1	34	(0)	2297033
19	15.0	2.2	2.1	chr20	21514952	21514997	(42929170)	+	(CACCCCC)n	Simple_repeat	1	47	(0)	2297204
18	33.7	3.5	0.0	chr20	21714893	21714978	(42729189)	+	(TCTC)n	Simple_repeat	1	89	(0)	2297492
19	13.3	4.8	0.0	chr20	21781345	21781386	(42662781)	+	A-rich	Low_complexity	1	44	(0)	2297579
624	15.6	2.4	0.0	chr20	23062410	23062531	(41381636)	+	MER5A1	DNA/hAT-Charlie	1	125	(41)	2299184
13	27.4	0.0	2.2	chr20	23637427	23637472	(40806695)	+	(CCAGG)n	Simple_repeat	1	46	(0)	2299952
459	22.1	9.9	0.7	chr20	24590990	24591079	(39853088)	+	L1ME3A	LINE/L1	6021	6125	(48)	2301096
34	0.0	0.0	0.0	chr20	24591080	24591108	(39853059)	+	(GT)n	Simple_repeat	1	29	(0)	2301097
459	22.1	9.9	0.7	chr20	24591109	24591154	(39853013)	+	L1ME3A	LINE/L1	6126	6170	(3)	2301096
12	19.1	2.6	2.6	chr20	25058488	25058525	(39385642)	+	(GGCCCAG)n	Simple_repeat	1	39	(0)	2301647
22	24.3	0.0	1.6	chr20	25247981	25248041	(39196126)	+	(CCCGC)n	Simple_repeat	1	61	(0)	2301899
2477	8.7	0.0	0.0	chr20	31553016	31553314	(32890853)	+	AluSg	SINE/Alu	1	299	(11)	2306246
372	31.1	10.3	0.5	chr20	31553461	31553644	(32890523)	C	MIR	SINE/MIR	(51)	211	8	2306247
10592	11.2	4.0	1.1	chr20	31577586	31579115	(32865052)	C	LTR12C	LTR/ERV1	(0)	1579	2	2306309
210	31.3	8.7	8.7	chr20	31674894	31674943	(32769224)	C	MIRb	SINE/MIR	(199)	69	27	2306599
840	18.9	4.3	2.2	chr20	31840800	31840983	(32603184)	C	MIR	SINE/MIR	(6)	256	69	2306999
51	26.0	4.2	4.0	chr20	32019084	32019324	(32424843)	+	(GGC)n	Simple_repeat	1	251	(0)	2307430
220	28.1	10.8	6.4	chr20	32029138	32029321	(32414846)	C	L2a	LINE/L2	(354)	3065	2866	2307445
937	26.8	2.1	0.9	chr20	32029309	32029538	(32414629)	C	MIR	SINE/MIR	(12)	250	18	2307460
185	26.5	0.0	3.9	chr20	32031723	32031773	(32412394)	C	MIR1_Amn	SINE/MIR	(80)	150	102	2307468
1908	15.2	0.3	0.3	chr20	32547300	32547589	(31896578)	C	AluJb	SINE/Alu	(21)	291	2	2308642
773	26.9	4.2	5.0	chr20	32547590	32547620	(31896547)	C	MIR	SINE/MIR	(232)	30	1	2308641
1946	10.9	3.2	0.4	chr20	32628355	32628630	(31815537)	+	AluSz	SINE/Alu	1	284	(28)	2308862
460	24.0	9.3	2.4	chr20	32743631	32743826	(31700341)	+	MIRb	SINE/MIR	46	267	(1)	2309172
2485	9.4	0.0	0.0	chr20	32877200	32877507	(31566660)	C	AluSx1	SINE/Alu	(3)	309	2	2309467
185	29.9	7.8	4.3	chr20	32877709	32877918	(31566249)	+	MIRb	SINE/MIR	8	225	(43)	2309468
375	25.7	6.0	0.7	chr20	33291761	33291894	(31152273)	+	MIR3	SINE/MIR	56	191	(39)	2310354
14	26.7	2.3	6.7	chr20	33811928	33812014	(30632153)	+	(TCC)n	Simple_repeat	1	89	(0)	2311675
406	29.5	8.3	1.2	chr20	33812159	33812326	(30631841)	+	MIR3	SINE/MIR	12	192	(16)	2311676
15	32.0	3.4	2.2	chr20	33993917	33994005	(30450162)	+	(GCG)n	Simple_repeat	1	92	(0)	2312095
261	24.8	12.5	5.4	chr20	34086903	34087013	(30357154)	C	L2a	LINE/L2	(14)	3412	3293	2312293
22	12.2	2.0	4.0	chr20	34269636	34269662	(30174505)	+	A-rich	Low_complexity	1	26	(0)	2312650
610	25.8	1.8	0.0	chr20	34311158	34311324	(30132843)	+	L1ME4b	LINE/L1	607	776	(116)	2312746
244	26.9	10.1	1.2	chr20	34558127	34558288	(29885879)	C	L1MEd	LINE/L1	(6033)	1070	893	2313327
12	8.2	0.0	9.4	chr20	34983864	34983895	(29460272)	+	(TCCT)n	Simple_repeat	1	32	(0)	2314290
14	14.8	0.0	3.0	chr20	34983915	34983947	(29460220)	+	GA-rich	Low_complexity	1	33	(0)	2314291
12	17.5	3.1	0.0	chr20	34983948	34983979	(29460188)	+	(TGAGGA)n	Simple_repeat	1	33	(0)	2314292
369	23.7	3.3	3.9	chr20	34984035	34984171	(29459996)	+	MIRb	SINE/MIR	38	183	(85)	2314293
294	31.4	7.0	3.5	chr20	35146260	35146383	(29297784)	+	MIRb	SINE/MIR	96	225	(43)	2314632
274	31.1	2.2	1.1	chr20	35146348	35146438	(29297729)	C	L2c	LINE/L2	(258)	3129	3038	2314633
2351	9.6	0.3	0.3	chr20	35148430	35148741	(29295426)	+	AluSq	SINE/Alu	1	312	(1)	2314637
1408	23.9	5.9	6.5	chr20	35561115	35561593	(28882574)	+	MLT1K	LTR/ERVL-MaLR	6	481	(114)	2315554
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
2451	6.8	1.0	0.0	chr20	35616634	35616929	(28827238)	C	AluSp	SINE/Alu	(14)	299	1	2315686
557	25.6	13.8	0.5	chr20	36091089	36091288	(28352879)	+	MIR	SINE/MIR	31	261	(1)	2316828
188	17.1	0.0	0.0	chr20	36091563	36091597	(28352570)	+	MIRc	SINE/MIR	130	164	(104)	2316829
1828	11.8	0.0	2.9	chr20	36094826	36094968	(28349199)	C	AluSz	SINE/Alu	(40)	272	137	2316833
238	21.9	18.0	0.9	chr20	36097726	36097831	(28346336)	C	L2c	LINE/L2	(330)	3057	2930	2316841
451	27.7	7.0	1.9	chr20	36122695	36122856	(28321311)	+	MIR3	SINE/MIR	32	202	(6)	2316903
658	25.0	9.4	5.8	chr20	36303681	36303956	(28140211)	+	MER102a	DNA/hAT-Charlie	44	330	(0)	2317307
929	21.6	5.6	1.0	chr20	36304214	36304535	(28139632)	C	L1ME3C	LINE/L1	(65)	6177	5857	2317308
13	20.9	0.0	0.0	chr20	36313290	36313322	(28130845)	+	(CTGC)n	Simple_repeat	1	33	(0)	2317330
231	12.2	0.0	4.7	chr20	36391366	36391408	(28052759)	C	UCON77	Unknown	(5)	112	72	2317505
214	29.2	11.1	10.6	chr20	36391621	36391781	(28052386)	+	MIRb	SINE/MIR	71	232	(36)	2317506
549	18.7	2.6	0.9	chr20	36780080	36780192	(27663975)	+	MIR3	SINE/MIR	34	148	(60)	2318420
248	24.2	19.5	1.5	chr20	36819575	36819704	(27624463)	C	MER5B	DNA/hAT-Charlie	(0)	178	20	2318523
28	18.4	0.9	9.7	chr20	37345991	37346102	(27098065)	+	(TCC)n	Simple_repeat	1	113	(0)	2319802
12	13.0	11.9	0.0	chr20	37346084	37346125	(27098042)	+	(CTCTCT)n	Simple_repeat	1	47	(0)	2319803
17	34.2	2.4	0.0	chr20	37346169	37346252	(27097915)	+	(CCGT)n	Simple_repeat	1	86	(0)	2319804
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
336	28.8	11.9	0.0	chr20	37915573	37915690	(26528477)	C	MIRb	SINE/MIR	(117)	151	18	2321047
540	32.6	15.7	4.5	chr20	37935425	37935828	(26508339)	+	L2b	LINE/L2	2912	3369	(6)	2321102
492	26.7	3.0	0.8	chr20	38300171	38300302	(26143865)	C	MIR	SINE/MIR	(126)	136	2	2321854
1956	10.5	13.7	1.6	chr20	38631337	38631655	(25812512)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2322513
323	26.0	7.4	1.0	chr20	38631833	38631933	(25812234)	C	L1MC4a	LINE/L1	(18)	7864	7757	2322514
612	27.8	13.8	1.4	chr20	38633427	38633641	(25810526)	C	MIR	SINE/MIR	(16)	246	1	2322520
14	27.9	3.2	1.6	chr20	38724151	38724212	(25719955)	+	(CCCT)n	Simple_repeat	1	64	(0)	2322738
28	3.3	0.0	0.0	chr20	38724419	38724449	(25719718)	+	(CGC)n	Simple_repeat	1	31	(0)	2322739
2329	10.6	0.0	0.0	chr20	38802654	38802956	(25641211)	+	AluSz	SINE/Alu	1	303	(9)	2322912
1774	17.6	2.3	7.8	chr20	38802957	38803302	(25640865)	C	MLT1B	LTR/ERVL-MaLR	(58)	332	1	2322911
254	24.7	15.2	0.0	chr20	38956607	38956695	(25487472)	C	L4_A_Mam	LINE/RTE-X	(784)	4206	4102	2323221
358	28.0	11.5	2.0	chr20	38956771	38956967	(25487200)	C	L4_A_Mam	LINE/RTE-X	(101)	4889	4672	2323222
973	20.0	0.0	0.0	chr20	38956972	38957121	(25487046)	+	AluJb	SINE/Alu	146	295	(17)	2323223
2156	23.2	6.2	1.7	chr20	39277059	39277654	(25166513)	+	MLT1E2	LTR/ERVL-MaLR	3	680	(0)	2323845
238	23.4	5.8	4.7	chr20	40357980	40358064	(24086103)	+	Charlie4z	DNA/hAT-Charlie	46	131	(36)	2325611
216	25.3	6.2	7.4	chr20	40945991	40946071	(23498096)	+	MIR3	SINE/MIR	109	188	(20)	2326744
248	15.2	7.8	1.7	chr20	40946114	40946173	(23497994)	C	AmnSINE1	SINE/5S-Deu-L2	(412)	163	100	2326745
13	24.1	3.1	4.5	chr20	41137372	41137435	(23306732)	+	G-rich	Low_complexity	1	66	(0)	2327096
507	24.3	15.5	1.6	chr20	41302662	41302916	(23141251)	+	MLT1J1	LTR/ERVL-MaLR	154	444	(0)	2327325
407	26.9	4.7	0.7	chr20	41303086	41303227	(23140940)	C	MIRc	SINE/MIR	(110)	158	11	2327326
342	32.9	9.7	1.2	chr20	41340508	41340667	(23103500)	C	MIRb	SINE/MIR	(68)	200	26	2327404
683	31.9	14.2	0.8	chr20	41350466	41350854	(23093313)	C	L2b	LINE/L2	(9)	3366	2917	2327428
19	14.3	4.2	2.0	chr20	41618703	41618750	(22825417)	+	G-rich	Low_complexity	1	50	(0)	2327798
473	23.8	3.7	4.4	chr20	41669571	41669706	(22774461)	+	L1M5	LINE/L1	5598	5732	(392)	2327889
12	22.6	3.1	6.1	chr20	41669826	41669889	(22774278)	+	A-rich	Low_complexity	1	66	(0)	2327890
13	24.8	5.1	1.6	chr20	41669872	41669930	(22774237)	+	GA-rich	Low_complexity	1	62	(0)	2327891
233	20.3	1.7	7.8	chr20	42150333	42150396	(22293771)	C	UCON34	Unknown	(59)	66	7	2328771
547	6.6	5.0	0.0	chr20	43034612	43034687	(21409480)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	2330308
199	28.0	8.4	5.6	chr20	43192117	43192313	(21251854)	+	L2c	LINE/L2	2964	3170	(217)	2330616
2671	9.3	6.0	2.5	chr20	43382369	43382800	(21061367)	+	LTR7	LTR/ERV1	1	448	(2)	2331038
16	26.6	2.0	1.9	chr20	43458260	43458310	(20985857)	+	(GC)n	Simple_repeat	1	52	(0)	2331218
235	31.6	8.7	1.0	chr20	43583306	43583401	(20860766)	+	MIRc	SINE/MIR	31	134	(134)	2331479
188	18.5	6.9	0.0	chr20	43668023	43668076	(20776091)	C	MIR	SINE/MIR	(186)	76	19	2331696
2539	6.5	0.0	0.0	chr20	43668193	43668499	(20775668)	C	AluSc8	SINE/Alu	(4)	307	1	2331697
1467	23.5	10.5	3.4	chr20	43844613	43845079	(20599088)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	2332107
371	21.8	1.1	1.1	chr20	43901302	43901389	(20542778)	+	MLT1J2	LTR/ERVL-MaLR	61	148	(296)	2332223
392	29.1	2.2	5.9	chr20	43901420	43901605	(20542562)	+	MLT1J2	LTR/ERVL-MaLR	262	440	(8)	2332223
374	22.5	14.7	1.3	chr20	44217682	44217834	(20226333)	+	L1ME3A	LINE/L1	5995	6171	(2)	2332930
496	32.1	5.0	1.9	chr20	44467048	44467260	(19976907)	+	MIR	SINE/MIR	35	254	(8)	2333588
201	11.4	2.8	0.0	chr20	44475680	44475714	(19968453)	+	MIR3	SINE/MIR	104	139	(69)	2333612
227	16.2	0.0	0.0	chr20	44475684	44475720	(19968447)	+	MIRc	SINE/MIR	112	148	(120)	2333613
190	30.2	6.0	1.6	chr20	44609668	44609731	(19834436)	C	L2b	LINE/L2	(65)	3310	3244	2333902
485	32.6	2.8	1.7	chr20	44724374	44724551	(19719616)	C	MIRb	SINE/MIR	(59)	209	30	2334189
496	28.7	4.1	4.1	chr20	44820300	44820470	(19623697)	+	MIR3	SINE/MIR	18	188	(20)	2334427
644	28.3	6.3	0.8	chr20	45305045	45305283	(19138884)	C	MER102b	DNA/hAT-Charlie	(1)	340	88	2335354
291	12.8	1.1	3.0	chr20	45305334	45305401	(19138766)	C	MIR3	SINE/MIR	(62)	146	82	2335355
1779	16.3	0.0	5.8	chr20	45312712	45313024	(19131143)	+	AluJb	SINE/Alu	5	299	(13)	2335367
15	16.6	2.3	4.4	chr20	45833754	45833818	(18610349)	+	G-rich	Low_complexity	1	63	(0)	2336326
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
13	22.7	7.3	3.4	chr20	46032123	46032204	(18411963)	+	(GCTGCGC)n	Simple_repeat	1	88	(0)	2336823
449	33.3	6.2	1.0	chr20	46071956	46072261	(18371906)	+	L2a	LINE/L2	2458	2780	(639)	2336883
956	21.0	2.2	0.0	chr20	46583211	46583391	(17860776)	C	MER58B	DNA/hAT-Charlie	(156)	185	1	2337956
229	29.1	10.8	1.3	chr20	47189101	47189250	(17254917)	C	MLT1K	LTR/ERVL-MaLR	(189)	406	241	2339438
256	27.7	13.3	4.4	chr20	47383888	47384023	(17060144)	C	MIRb	SINE/MIR	(68)	200	51	2339889
1761	18.6	4.2	2.0	chr20	47666755	47667155	(16777012)	+	L1MB5	LINE/L1	5765	6174	(0)	2340597
23	14.6	3.6	1.8	chr20	47785854	47785908	(16658259)	+	(CGGCCC)n	Simple_repeat	1	57	(0)	2340840
923	31.6	9.3	2.3	chr20	49395674	49396066	(15048101)	C	L2a	LINE/L2	(201)	3225	2789	2344313
24	26.5	4.2	3.2	chr20	49400965	49401083	(15043084)	+	(TTCC)n	Simple_repeat	1	124	(0)	2344326
11	18.1	2.4	4.8	chr20	49483434	49483474	(14960693)	+	(TCCTCC)n	Simple_repeat	1	42	(0)	2344538
63	8.7	0.0	0.0	chr20	49483476	49483562	(14960605)	+	(CTC)n	Simple_repeat	1	87	(0)	2344539
458	29.2	10.4	5.3	chr20	49484492	49484737	(14959430)	C	L2a	LINE/L2	(1)	3425	3166	2344540
18	12.2	0.0	0.0	chr20	49928695	49928721	(14515446)	+	(T)n	Simple_repeat	1	27	(0)	2345639
1403	14.1	0.3	14.1	chr20	49935754	49936114	(14508053)	+	AluJo	SINE/Alu	1	311	(1)	2345667
14	26.0	0.0	3.7	chr20	49936321	49936374	(14507793)	+	(GCCCCCC)n	Simple_repeat	1	54	(0)	2345668
397	29.9	4.5	9.3	chr20	49982121	49982378	(14461789)	+	L2b	LINE/L2	3130	3374	(1)	2345773
344	23.1	16.1	0.0	chr20	50044487	50044590	(14399577)	+	MIRb	SINE/MIR	93	216	(52)	2345942
248	16.4	1.8	5.2	chr20	50151101	50151158	(14293009)	C	MIR3	SINE/MIR	(87)	121	66	2346206
250	27.9	0.0	4.2	chr20	50151466	50151566	(14292601)	C	MIR1_Amn	SINE/MIR	(59)	171	74	2346207
14	10.3	2.9	5.6	chr20	50153672	50153706	(14290461)	+	(GGC)n	Simple_repeat	1	36	(0)	2346210
1521	22.2	2.9	5.9	chr20	50171557	50171812	(14272355)	+	MLT1B	LTR/ERVL-MaLR	103	372	(2)	2346264
944	28.9	11.8	1.3	chr20	50432563	50433063	(14011104)	+	L2a	LINE/L2	2841	3417	(9)	2346912
439	32.3	3.9	2.9	chr20	50433132	50433335	(14010832)	C	L2b	LINE/L2	(195)	3180	2975	2346913
2180	12.7	0.0	0.0	chr20	50507903	50508201	(13935966)	C	AluSz	SINE/Alu	(13)	299	1	2347135
443	27.2	5.3	0.0	chr20	50508202	50508326	(13935841)	+	MIRb	SINE/MIR	129	260	(8)	2347136
325	24.1	5.1	7.4	chr20	50508526	50508646	(13935521)	C	MER5A	DNA/hAT-Charlie	(28)	161	44	2347137
13	12.7	0.0	0.0	chr20	50692106	50692131	(13752036)	+	(TTTTG)n	Simple_repeat	1	26	(0)	2347481
196	20.0	0.0	0.0	chr20	51034814	51034853	(13409314)	C	MIRc	SINE/MIR	(122)	146	107	2348262
229	32.6	3.0	3.0	chr20	51278752	51278852	(13165315)	C	L2c	LINE/L2	(564)	2855	2755	2348800
391	33.3	6.2	0.7	chr20	52226488	52226623	(12217544)	C	LTR104_Mam	LTR/Gypsy	(504)	1005	862	2351052
12	19.0	5.4	0.0	chr20	52226665	52226701	(12217466)	+	(TCTTTCT)n	Simple_repeat	1	39	(0)	2351053
46	19.3	0.7	0.0	chr20	52972406	52972558	(11471609)	+	(TG)n	Simple_repeat	1	154	(0)	2352542
57	13.9	1.0	0.0	chr20	52972696	52972792	(11471375)	+	(GAG)n	Simple_repeat	1	98	(0)	2352543
412	29.3	15.1	2.5	chr20	53406611	53406887	(11037280)	C	L2a	LINE/L2	(3)	3423	3106	2353409
245	30.8	2.5	1.9	chr20	53579765	53579893	(10864274)	C	MIR	SINE/MIR	(87)	181	46	2353805
598	26.9	1.6	3.1	chr20	53750615	53750796	(10693371)	+	MER46C	DNA/TcMar-Tigger	155	334	(4)	2354257
187	29.1	13.4	0.0	chr20	53750818	53750920	(10693247)	C	MIR	SINE/MIR	(136)	126	8	2354258
293	6.8	0.0	0.0	chr20	53833639	53833682	(10610485)	C	MADE1	DNA/TcMar-Mariner	(36)	44	1	2354464
286	36.3	7.7	2.0	chr20	53833720	53833916	(10610251)	C	L2b	LINE/L2	(194)	3181	2973	2354465
31	3.3	0.0	0.0	chr20	53834308	53834338	(10609829)	+	(CT)n	Simple_repeat	1	31	(0)	2354466
592	32.2	3.8	2.3	chr20	54362307	54362582	(10081585)	+	L2a	LINE/L2	2815	3091	(284)	2355563
3598	12.2	4.3	0.9	chr20	54363897	54364512	(10079655)	+	MER4B	LTR/ERV1	1	900	(0)	2355567
224	27.6	16.0	0.0	chr20	56740638	56740742	(7703425)	C	MIRb	SINE/MIR	(117)	151	27	2359744
1885	19.6	5.8	0.2	chr20	56740747	56741156	(7703011)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	72	2359745
637	32.4	10.7	5.5	chr20	56829205	56829603	(7614564)	+	L2b	LINE/L2	2954	3375	(0)	2359966
34	40.4	0.0	0.0	chr20	57092358	57092524	(7351643)	+	(CA)n	Simple_repeat	1	167	(0)	2360524
1952	22.6	13.8	6.3	chr20	58188306	58188904	(6255263)	+	MLT1E1	LTR/ERVL-MaLR	1	651	(3)	2362553
1229	27.9	8.1	6.9	chr20	58188905	58189267	(6254900)	+	Kanga2_a	DNA/TcMar-Tc2	324	702	(186)	2362551
303	22.8	6.1	5.4	chr20	58374399	58374546	(6069621)	+	MER90	LTR/ERV1	330	517	(97)	2362821
183	28.9	0.0	9.5	chr20	58374626	58374709	(6069458)	C	MIR	SINE/MIR	(166)	96	21	2362819
230	26.9	2.5	2.5	chr20	58400202	58400281	(6043886)	+	MIR3	SINE/MIR	108	187	(21)	2362873
115	36.0	0.2	4.2	chr20	58623241	58623880	(5820287)	+	(TG)n	Simple_repeat	1	641	(0)	2363256
955	24.4	5.2	2.6	chr20	59107889	59108231	(5335936)	C	L1MC5	LINE/L1	(681)	5483	5127	2363946
1634	22.6	5.7	0.5	chr20	59108265	59108700	(5335467)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	8	2363948
331	32.5	10.4	5.7	chr20	59716095	59716206	(4727961)	+	L2a	LINE/L2	2968	3089	(337)	2364912
67	0.0	1.6	0.0	chr20	59716207	59716267	(4727900)	+	(TG)n	Simple_repeat	1	62	(0)	2364913
50	19.6	2.6	0.0	chr20	59767777	59767892	(4676275)	+	(TTTCC)n	Simple_repeat	1	119	(0)	2365011
21	28.8	1.1	3.3	chr20	59767907	59767995	(4676172)	+	(TCTC)n	Simple_repeat	1	90	(0)	2365012
567	26.4	9.3	6.1	chr20	60308274	60308697	(4135470)	C	LTR67B	LTR/ERVL	(7)	613	175	2365787
249	30.0	9.1	0.9	chr20	60589810	60589920	(3854247)	C	LTR89	LTR/ERVL?	(486)	393	273	2366182
284	31.9	7.7	3.0	chr20	60933935	60934131	(3510036)	+	MIR	SINE/MIR	28	234	(28)	2366681
13	16.6	8.2	1.9	chr20	61279788	61279836	(3164331)	+	(CTGCAGG)n	Simple_repeat	1	53	(0)	2367162
1639	21.8	2.2	0.0	chr20	61413862	61414214	(3029953)	C	MLT1B	LTR/ERVL-MaLR	(22)	368	8	2367345
1694	25.5	11.9	5.0	chr20	61436268	61436931	(3007236)	C	MER21C	LTR/ERVL	(94)	844	129	2367376
334	29.8	3.4	0.0	chr20	61436935	61437048	(3007119)	+	L2b	LINE/L2	3242	3359	(16)	2367375
288	21.7	11.8	0.8	chr20	62604786	62604906	(1839261)	C	MLT1G3	LTR/ERVL-MaLR	(448)	147	12	2368748
19	22.6	7.1	2.9	chr20	62708942	62709039	(1735128)	+	(GAGCCGG)n	Simple_repeat	1	105	(0)	2368860
36	35.1	1.9	4.1	chr20	62776953	62777214	(1666953)	+	G-rich	Low_complexity	1	267	(0)	2368932
15	13.4	3.0	0.0	chr20	63006809	63006841	(1437326)	+	(GCCGCT)n	Simple_repeat	1	34	(0)	2369181
656	23.9	6.9	5.7	chr20	63082608	63082908	(1361259)	+	LTR16E1	LTR/ERVL	216	520	(18)	2369253
17	20.2	6.2	4.7	chr20	63177143	63177223	(1266944)	+	G-rich	Low_complexity	1	86	(0)	2369339
22	10.4	0.0	4.4	chr20	63177186	63177230	(1266937)	+	(GGCGT)n	Simple_repeat	1	45	(0)	2369340
24	40.5	0.0	0.8	chr20	63535398	63535517	(908650)	+	(AC)n	Simple_repeat	1	120	(0)	2369684
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
15	7.6	3.6	0.0	chr20	63738070	63738097	(706070)	+	(GGGCG)n	Simple_repeat	1	29	(0)	2369963
15	23.4	1.5	5.9	chr20	63938717	63938783	(505384)	+	(GGCGG)n	Simple_repeat	1	68	(0)	2370288
580	23.9	10.1	4.5	chr20	63973530	63973907	(470260)	+	MLT1D	LTR/ERVL-MaLR	29	451	(16)	2370315
250	25.0	0.0	0.0	chr21	14988865	14988924	(31721059)	+	MLT1O	LTR/ERVL-MaLR	305	364	(178)	2378524
19	11.0	2.4	2.4	chr21	14988933	14988973	(31721010)	+	GA-rich	Low_complexity	1	42	(0)	2378525
3185	9.0	3.2	1.5	chr21	15367058	15367521	(31342462)	+	MER4A1	LTR/ERV1	1	472	(0)	2379024
256	36.6	4.3	0.0	chr21	15367552	15367663	(31342320)	C	MIRc	SINE/MIR	(119)	149	33	2379025
2220	12.5	0.3	0.0	chr21	15744585	15744887	(30965096)	C	AluSq	SINE/Alu	(9)	304	1	2379564
19	13.0	2.2	4.3	chr21	15745016	15745070	(30964913)	+	(CCTCC)n	Simple_repeat	1	53	(0)	2379565
1835	24.0	11.2	6.6	chr21	15745195	15745462	(30964521)	C	L1M5	LINE/L1	(755)	5391	5096	2379566
1335	16.2	0.0	2.1	chr21	26090159	26090398	(20619585)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	2	2393493
14	14.0	2.1	8.2	chr21	26844279	26844326	(19865657)	+	(CTTCGT)n	Simple_repeat	1	49	(0)	2394581
2371	6.5	0.3	0.0	chr21	31661372	31661661	(15048322)	C	AluSx3	SINE/Alu	(20)	291	1	2401854
310	31.6	3.7	1.9	chr21	31661889	31662049	(15047934)	+	MER102b	DNA/hAT-Charlie	52	215	(126)	2401855
15	19.2	1.9	5.6	chr21	33109839	33109891	(13600092)	+	(CCTCC)n	Simple_repeat	1	54	(0)	2404327
2778	16.1	7.5	1.4	chr21	33361833	33362144	(13347839)	+	MER21B	LTR/ERVL	332	672	(196)	2404792
4120	12.7	2.5	0.0	chr21	33362145	33362773	(13347210)	C	LTR9D	LTR/ERV1	(0)	645	1	2404793
17	2.5	15.0	0.0	chr21	34073155	34073194	(12636789)	+	(GCACGC)n	Simple_repeat	1	46	(0)	2406104
12	6.6	8.3	5.1	chr21	34073272	34073307	(12636676)	+	(GCAG)n	Simple_repeat	1	39	(0)	2406105
43	16.6	5.4	5.1	chr21	34073379	34073527	(12636456)	+	(GGCGG)n	Simple_repeat	1	157	(0)	2406106
810	17.7	3.7	0.8	chr21	35598207	35598382	(11111601)	+	LTR27D	LTR/ERV1	1	179	(841)	2408354
417	15.6	0.0	0.0	chr21	35598364	35598440	(11111543)	+	LTR25	LTR/ERV1	425	501	(343)	2408355
3523	8.3	4.4	0.6	chr21	36104268	36104752	(10605231)	+	LTR10F	LTR/ERV1	1	504	(7)	2409144
208	25.0	1.4	5.6	chr21	36385070	36385141	(10324842)	+	L2b	LINE/L2	3307	3375	(0)	2409762
16	3.5	0.0	10.8	chr21	36385150	36385186	(10324797)	+	(AAT)n	Simple_repeat	1	37	(0)	2409763
16	22.1	2.1	0.0	chr21	36385368	36385414	(10324569)	+	(GCGCGGC)n	Simple_repeat	1	48	(0)	2409764
269	32.6	3.0	0.0	chr21	36630700	36630828	(10079155)	+	MIR3	SINE/MIR	55	187	(21)	2410219
203	33.5	2.8	3.4	chr21	36939387	36939565	(9770418)	+	MER5A	DNA/hAT-Charlie	7	184	(5)	2410693
1478	22.3	12.1	8.2	chr21	36990585	36991247	(9718736)	C	MER21C	LTR/ERVL	(130)	808	18	2410806
897	14.6	4.1	4.1	chr21	37381647	37381817	(9328166)	+	AluJb	SINE/Alu	135	305	(7)	2411496
310	29.9	0.2	4.2	chr21	37382095	37382208	(9327775)	C	L2b	LINE/L2	(10)	3416	3260	2411497
529	7.0	1.4	1.4	chr21	37382261	37382331	(9327652)	C	FLAM_A	SINE/Alu	(30)	112	42	2411498
14	14.2	3.2	0.0	chr21	37382437	37382467	(9327516)	+	(TATT)n	Simple_repeat	1	32	(0)	2411499
474	31.9	3.7	0.3	chr21	37564796	37564960	(9145023)	C	MIRb	SINE/MIR	(92)	176	4	2411793
1009	30.0	3.4	2.3	chr21	37631452	37631799	(9078184)	+	L1ME3F	LINE/L1	47	398	(5844)	2411892
508	31.9	9.7	7.4	chr21	37631966	37632236	(9077747)	+	L1ME3F	LINE/L1	237	514	(5728)	2411892
202	32.4	4.3	2.6	chr21	37766216	37766329	(8943654)	+	MamTip2	DNA/hAT-Tip100	7	122	(183)	2412091
3905	19.1	3.1	0.7	chr21	38479608	38480322	(8229661)	C	MER44C	DNA/TcMar-Tigger	(0)	733	1	2413080
1501	25.4	6.3	2.0	chr21	38480323	38480531	(8229452)	+	MLT1C	LTR/ERVL-MaLR	254	465	(2)	2413079
2076	16.5	5.5	0.0	chr21	38760448	38760810	(7949173)	+	MLT1B	LTR/ERVL-MaLR	7	390	(0)	2413464
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
2085	21.4	6.4	1.7	chr21	39377048	39377522	(7332461)	+	MLT1D	LTR/ERVL-MaLR	5	503	(2)	2414482
1383	9.6	23.9	0.0	chr21	39530815	39531043	(7178940)	+	AluSx	SINE/Alu	1	301	(11)	2414754
1090	22.6	4.0	5.5	chr21	39531044	39531384	(7178599)	+	MLT1C	LTR/ERVL-MaLR	119	463	(4)	2414753
228	32.4	11.7	1.1	chr21	39531406	39531580	(7178403)	+	L2	LINE/L2	2149	2344	(1075)	2414755
2922	30.3	10.5	6.4	chr21	39567081	39568950	(7141033)	+	L2a	LINE/L2	905	2787	(632)	2414818
1307	12.1	0.0	0.0	chr21	39643272	39643444	(7066539)	+	AluSx	SINE/Alu	137	309	(3)	2414946
766	20.2	6.8	3.5	chr21	41113374	41113573	(5596410)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	261	2416977
13	8.5	4.0	0.0	chr21	41761997	41762021	(4947962)	+	(AAAC)n	Simple_repeat	1	26	(0)	2417968
190	23.8	0.0	0.0	chr21	41877907	41877948	(4832035)	C	MIRb	SINE/MIR	(0)	268	227	2418115
41	21.6	6.3	1.3	chr21	41879115	41879257	(4830726)	+	(GGCGGCG)n	Simple_repeat	1	152	(0)	2418116
430	30.6	11.4	3.8	chr21	41973727	41974120	(4735863)	+	LTR16E2	LTR/ERVL	104	531	(37)	2418255
182	38.8	14.5	1.9	chr21	42091547	42092316	(4617667)	C	L2	LINE/L2	(747)	2672	1790	2418428
15	5.5	0.0	0.0	chr21	42092386	42092404	(4617579)	+	(T)n	Simple_repeat	1	19	(0)	2418429
12	21.6	0.0	0.0	chr21	42497075	42497106	(4212877)	+	(CACACA)n	Simple_repeat	1	32	(0)	2418958
231	30.4	10.2	3.2	chr21	42512326	42512515	(4197468)	C	L2	LINE/L2	(555)	2864	2660	2418987
12	15.0	3.3	0.0	chr21	42593521	42593550	(4116433)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	2419060
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
275	21.8	3.6	10.4	chr21	43333469	43333619	(3376364)	C	L2b	LINE/L2	(0)	3426	3297	2420168
203	32.9	4.8	0.0	chr21	43358128	43358206	(3351777)	+	L3	LINE/CR1	1928	2010	(2089)	2420195
333	25.3	0.0	0.0	chr21	43358347	43358421	(3351562)	C	LTR16A1	LTR/ERVL	(2)	454	380	2420196
1966	12.3	0.3	3.9	chr21	43659016	43659324	(3050659)	+	AluJr	SINE/Alu	1	298	(14)	2420579
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
21	28.4	1.0	5.0	chr21	44012380	44012478	(2697505)	+	(GCCGG)n	Simple_repeat	1	100	(0)	2421180
1161	16.8	7.6	0.4	chr21	44653176	44653408	(2056575)	+	LTR64	LTR/ERV1	188	438	(90)	2421998
561	13.4	13.1	3.2	chr21	44653412	44653534	(2056449)	+	LTR64	LTR/ERV1	376	512	(16)	2421999
299	28.7	3.9	3.2	chr21	44695572	44695723	(2014260)	+	MER63B	DNA/hAT-Blackjack	317	386	(50)	2422041
45	21.2	4.0	6.7	chr21	44706298	44706498	(2003485)	+	(CACG)n	Simple_repeat	1	209	(0)	2422050
11	21.8	2.2	4.3	chr21	44801596	44801641	(1908342)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	2422172
3487	11.6	3.6	0.6	chr21	44844723	44844977	(1865006)	C	MER41C	LTR/ERV1	(0)	521	267	2422240
192	27.4	4.6	0.0	chr21	44872537	44872598	(1837385)	+	L2	LINE/L2	2782	2846	(573)	2422270
338	29.9	10.3	2.9	chr21	45068410	45068688	(1641295)	C	L1M5	LINE/L1	(1628)	4518	4217	2422487
378	16.7	0.0	0.0	chr21	45068768	45068827	(1641156)	C	AluJo	SINE/Alu	(80)	232	173	2422488
479	34.5	12.5	2.0	chr21	45068831	45069321	(1640662)	+	L2	LINE/L2	2135	2684	(735)	2422489
27	24.4	2.2	2.2	chr21	46229094	46229183	(480800)	+	(GGTG)n	Simple_repeat	1	92	(0)	2423636
13	15.5	5.6	0.0	chr21	46229404	46229439	(480544)	+	G-rich	Low_complexity	1	38	(0)	2423637
13	4.1	8.0	0.0	chr21	46325382	46325406	(384577)	+	(GGAG)n	Simple_repeat	1	27	(0)	2423814
15	12.2	0.0	0.0	chr22	17120321	17120347	(33698121)	+	(GTG)n	Simple_repeat	1	27	(0)	2428248
15	20.1	0.0	0.0	chr22	17120597	17120630	(33697838)	+	(GCA)n	Simple_repeat	1	34	(0)	2428249
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
13	9.6	5.4	5.1	chr22	17199415	17199451	(33619017)	+	(CTC)n	Simple_repeat	1	39	(0)	2428433
341	30.5	10.8	0.7	chr22	17199659	17199800	(33618668)	+	MIRb	SINE/MIR	1	158	(110)	2428434
2329	8.9	0.3	1.3	chr22	17358203	17358516	(33459952)	C	AluSp	SINE/Alu	(1)	312	2	2428834
616	25.1	13.9	4.4	chr22	17390935	17391251	(33427217)	C	L1MC4	LINE/L1	(1)	8041	7690	2428898
233	27.0	18.5	0.1	chr22	17391427	17391614	(33426854)	+	MIRc	SINE/MIR	36	268	(0)	2428899
2126	13.8	1.3	1.3	chr22	17415231	17415541	(33402927)	C	AluJb	SINE/Alu	(1)	311	1	2428958
2442	7.4	0.0	0.0	chr22	17529419	17529714	(33288754)	+	AluY	SINE/Alu	1	296	(15)	2429186
688	13.7	25.2	4.4	chr22	18988102	18988240	(31830228)	+	Tigger4a	DNA/TcMar-Tigger	2	189	(47)	2431270
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
23	21.0	0.0	10.2	chr22	20495544	20495651	(30322817)	+	(CGCGCC)n	Simple_repeat	1	108	(0)	2433426
16	19.9	0.0	2.4	chr22	20704086	20704127	(30114341)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	2433785
12	22.2	7.7	0.0	chr22	20704302	20704353	(30114115)	+	(GCCGCT)n	Simple_repeat	1	56	(0)	2433786
1673	13.7	6.6	0.4	chr22	20956614	20956884	(29861584)	+	AluJb	SINE/Alu	1	289	(23)	2434317
14	20.8	8.8	1.4	chr22	20957779	20957846	(29860622)	+	G-rich	Low_complexity	1	74	(0)	2434319
14	5.0	0.0	0.0	chr22	20958091	20958111	(29860357)	+	(CCGC)n	Simple_repeat	1	21	(0)	2434320
216	34.1	7.1	0.0	chr22	21001558	21001648	(29816820)	C	MIR	SINE/MIR	(126)	136	39	2434375
289	28.8	12.6	2.2	chr22	21010527	21010661	(29807807)	C	MER5A	DNA/hAT-Charlie	(32)	157	7	2434392
551	28.9	14.9	5.2	chr22	21010788	21011214	(29807254)	+	L2a	LINE/L2	2950	3425	(1)	2434393
14	17.6	0.0	0.0	chr22	21629314	21629345	(29189123)	+	(GCACGT)n	Simple_repeat	1	32	(0)	2435563
215	22.3	23.4	0.0	chr22	21984797	21984917	(28833551)	+	L2	LINE/L2	2639	2796	(623)	2436315
17	22.4	1.8	3.5	chr22	23533397	23533452	(27285016)	+	GA-rich	Low_complexity	1	57	(0)	2438457
234	19.4	11.4	0.0	chr22	23763630	23763691	(27054777)	C	MER5A	DNA/hAT-Charlie	(2)	187	118	2438932
291	32.9	6.1	4.3	chr22	23787518	23787679	(27030789)	C	Charlie19a	DNA/hAT-Charlie	(188)	198	34	2438973
434	22.8	8.1	3.6	chr22	24146823	24147005	(26671463)	C	MIRb	SINE/MIR	(48)	220	11	2439572
421	34.4	15.3	2.0	chr22	24404032	24404719	(26413749)	+	L2	LINE/L2	2014	2809	(610)	2439992
35	21.3	6.9	3.4	chr22	24423934	24424096	(26394372)	+	G-rich	Low_complexity	1	168	(0)	2440009
433	26.9	4.3	1.4	chr22	24699563	24699706	(26118762)	C	MIRc	SINE/MIR	(62)	206	56	2440494
379	30.3	16.8	0.9	chr22	24997076	24997295	(25821173)	C	L2c	LINE/L2	(0)	3387	3126	2441200
512	20.2	22.5	0.8	chr22	25775555	25775794	(25042674)	+	L2	LINE/L2	2009	2315	(1104)	2442823
240	27.6	2.6	1.3	chr22	25775808	25775884	(25042584)	+	L2a	LINE/L2	3257	3334	(92)	2442824
245	26.1	13.6	7.7	chr22	26428441	26428764	(24389704)	+	L2c	LINE/L2	3030	3375	(0)	2444330
245	25.3	13.3	1.1	chr22	27633418	27633521	(23184947)	C	MIR1_Amn	SINE/MIR	(90)	140	14	2447151
731	21.6	6.1	0.0	chr22	27633755	27633907	(23184561)	C	MER45A	DNA/hAT-Tip100	(15)	163	1	2447152
218	28.8	6.3	5.6	chr22	27671009	27671133	(23147335)	+	MIRb	SINE/MIR	31	156	(52)	2447259
412	28.1	8.6	5.6	chr22	27671230	27671444	(23147024)	+	L2b	LINE/L2	2976	3197	(178)	2447260
348	29.5	1.6	2.4	chr22	27673043	27673167	(23145301)	C	MIRb	SINE/MIR	(21)	247	124	2447265
1674	16.2	0.6	7.5	chr22	27673327	27673659	(23144809)	+	AluJo	SINE/Alu	1	310	(2)	2447266
485	29.2	5.0	3.4	chr22	27679565	27679741	(23138727)	+	L3	LINE/CR1	3886	4065	(34)	2447276
988	28.2	6.9	2.8	chr22	27679930	27680316	(23138152)	+	L2a	LINE/L2	3017	3420	(6)	2447277
13875	9.5	3.2	1.6	chr22	27742433	27744537	(23073931)	+	HERVH-int	LTR/ERV1	1	2141	(5572)	2447423
2059	15.1	0.0	1.6	chr22	27756744	27757060	(23061408)	C	AluJr	SINE/Alu	(0)	312	1	2447448
297	24.4	14.2	2.3	chr22	27757062	27757191	(23061277)	C	MIRb	SINE/MIR	(66)	202	55	2447449
1055	9.1	0.0	0.0	chr22	27757202	27757333	(23061135)	C	AluJo	SINE/Alu	(179)	133	2	2447450
278	20.0	6.2	0.0	chr22	27780415	27780474	(23037994)	+	MER63D	DNA/hAT-Blackjack	15	78	(983)	2447507
402	23.7	16.0	0.0	chr22	27810318	27810448	(23008020)	+	MIRb	SINE/MIR	105	260	(8)	2447552
203	28.7	2.1	10.5	chr22	28114532	28114579	(22703889)	C	Tigger19b	DNA/TcMar-Tigger	(1)	549	502	2447991
15	10.7	3.3	0.0	chr22	28130596	28130625	(22687843)	+	(ATGCAG)n	Simple_repeat	1	31	(0)	2448027
16	18.1	4.5	0.0	chr22	28130782	28130825	(22687643)	+	(TTTTGTT)n	Simple_repeat	1	46	(0)	2448028
3001	15.9	1.8	2.0	chr22	28487896	28488452	(22330016)	+	LTR38	LTR/ERV1	1	556	(0)	2448581
282	34.9	0.9	1.9	chr22	28678722	28678829	(22139639)	C	L2b	LINE/L2	(9)	3366	3260	2448921
21	27.6	0.0	5.4	chr22	28800218	28800309	(22018159)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	2449228
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
25	9.8	0.0	4.2	chr22	29031030	29031077	(21787391)	+	(CCCTGC)n	Simple_repeat	1	48	(0)	2449755
2377	9.0	0.0	0.3	chr22	29493377	29493675	(21324793)	C	AluSx	SINE/Alu	(13)	299	2	2450691
528	28.9	10.0	0.0	chr22	29493691	29493870	(21324598)	C	MIRb	SINE/MIR	(58)	210	11	2450684
564	24.6	0.9	0.0	chr22	29493931	29494040	(21324428)	C	MER81	DNA/hAT-Blackjack	(3)	111	1	2450692
199	30.4	3.8	3.8	chr22	29701790	29701895	(21116573)	+	L2b	LINE/L2	3240	3345	(30)	2451142
348	29.9	9.3	1.0	chr22	29872089	29872229	(20946239)	+	MIR3	SINE/MIR	17	171	(59)	2451545
436	28.0	8.7	2.5	chr22	29872282	29872442	(20946026)	+	MIR	SINE/MIR	1	172	(90)	2451546
16	16.0	7.0	0.0	chr22	30246294	30246336	(20572132)	+	A-rich	Low_complexity	1	46	(0)	2452227
2216	7.7	8.6	0.0	chr22	30255506	30255791	(20562677)	+	AluSp	SINE/Alu	1	313	(0)	2452242
14	8.7	0.0	3.7	chr22	30255792	30255818	(20562650)	+	(AAGA)n	Simple_repeat	1	27	(0)	2452243
298	36.1	1.4	2.0	chr22	30257060	30257206	(20561262)	C	MIRc	SINE/MIR	(8)	260	115	2452248
453	24.8	8.7	0.7	chr22	30356405	30356542	(20461926)	C	MER5A1	DNA/hAT-Charlie	(0)	166	17	2452430
196	31.9	7.2	2.5	chr22	30398590	30398708	(20419760)	+	L2b	LINE/L2	3024	3148	(227)	2452519
832	23.9	8.5	0.9	chr22	30398769	30398996	(20419472)	+	MIR	SINE/MIR	2	248	(14)	2452520
482	27.1	4.3	0.1	chr22	30402457	30402621	(20415847)	C	MIRc	SINE/MIR	(39)	169	4	2452529
13	25.3	0.0	0.0	chr22	30402759	30402796	(20415672)	+	A-rich	Low_complexity	1	38	(0)	2452530
689	29.9	1.1	0.6	chr22	30655565	30655742	(20162726)	C	LTR16B2	LTR/ERVL	(274)	188	10	2453110
290	31.5	7.1	2.3	chr22	30655750	30655882	(20162586)	C	MIRb	SINE/MIR	(105)	163	24	2453111
1735	16.5	0.0	1.4	chr22	30655996	30656274	(20162194)	C	AluJo	SINE/Alu	(35)	277	3	2453112
219	21.6	16.5	2.1	chr22	30802112	30802217	(20016251)	C	MIRc	SINE/MIR	(52)	156	44	2453436
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
12	17.9	5.0	2.4	chr22	31097085	31097124	(19721344)	+	(TGCC)n	Simple_repeat	1	42	(0)	2454005
249	32.8	4.5	0.9	chr22	31349028	31349154	(19469314)	C	MIRc	SINE/MIR	(89)	179	50	2454555
478	27.4	2.0	0.0	chr22	31351837	31351982	(19466486)	C	MIR	SINE/MIR	(14)	248	100	2454563
12	20.1	0.0	2.8	chr22	31631011	31631046	(19187422)	+	G-rich	Low_complexity	1	36	(0)	2455233
326	23.8	16.1	1.8	chr22	32202441	32202559	(18615909)	C	REP522	Satellite/telo	(657)	136	1	2456555
3206	25.1	6.8	5.5	chr22	32203087	32206587	(18611881)	C	REP522	Satellite/telo	(94)	3546	1	2456556
317	27.9	7.8	2.5	chr22	32800405	32800554	(18017914)	+	MIRc	SINE/MIR	87	237	(31)	2457739
411	30.2	11.8	0.4	chr22	32800747	32800972	(18017496)	+	L2a	LINE/L2	2994	3248	(178)	2457740
615	30.9	8.5	1.3	chr22	32830253	32830491	(17987977)	C	MIRb	SINE/MIR	(9)	259	2	2457796
15	25.5	0.0	4.9	chr22	33921070	33921130	(16897338)	+	(CGGCGC)n	Simple_repeat	1	61	(0)	2460048
598	32.4	4.1	0.3	chr22	33987027	33987308	(16831160)	C	L2	LINE/L2	(1973)	1446	1154	2460181
226	22.4	2.0	0.0	chr22	34975647	34975695	(15842773)	C	MER5A	DNA/hAT-Charlie	(2)	187	138	2461977
949	14.3	2.4	1.2	chr22	34975723	34975885	(15842583)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	2461978
602	24.4	10.5	2.8	chr22	34975890	34976100	(15842368)	+	MIRb	SINE/MIR	40	268	(0)	2461979
489	22.1	11.2	0.0	chr22	35155139	35155265	(15663203)	C	MER5A1	DNA/hAT-Charlie	(23)	143	1	2462381
12	18.7	4.3	4.2	chr22	35372274	35372319	(15446149)	+	(CTC)n	Simple_repeat	1	48	(0)	2462818
200	20.8	7.7	0.0	chr22	35450810	35450857	(15367611)	C	MIRb	SINE/MIR	(207)	61	10	2463026
13	10.7	0.0	8.3	chr22	35450982	35451017	(15367451)	+	(GAAT)n	Simple_repeat	1	36	(0)	2463027
2214	9.7	0.0	2.3	chr22	35517036	35517334	(15301134)	C	AluSq	SINE/Alu	(21)	292	1	2463198
327	33.8	6.2	8.1	chr22	35517335	35517366	(15301102)	C	LTR85b	LTR/Gypsy?	(562)	222	195	2463197
782	33.6	1.2	0.0	chr22	35517370	35517622	(15300846)	+	MIR	SINE/MIR	7	262	(0)	2463199
1827	19.5	5.5	3.8	chr22	36222408	36222855	(14595613)	C	MLT1D	LTR/ERVL-MaLR	(49)	456	1	2464604
1554	29.8	4.7	0.9	chr22	36258503	36259070	(14559398)	C	MER41G	LTR/ERV1	(10)	875	285	2464671
2061	12.0	0.3	0.3	chr22	36423058	36423383	(14395085)	C	AluSq2	SINE/Alu	(0)	313	1	2464998
270	32.0	9.5	5.0	chr22	36797335	36797594	(14020874)	C	L2	LINE/L2	(434)	2985	2713	2465867
460	30.5	14.1	2.1	chr22	37067865	37068239	(13750229)	+	L2b	LINE/L2	2949	3375	(0)	2466440
294	22.2	4.7	1.2	chr22	37068264	37068345	(13750123)	+	MIRc	SINE/MIR	61	145	(123)	2466441
180	29.0	9.2	5.5	chr22	37068317	37068389	(13750079)	C	MamRTE1	LINE/RTE-BovB	(322)	3490	3415	2466442
4957	16.2	3.5	4.6	chr22	37258622	37259476	(13558992)	+	MER49	LTR/ERV1	78	923	(0)	2466829
309	37.0	4.0	4.4	chr22	37259477	37259499	(13558969)	C	L1MC	LINE/L1	(1215)	4931	4909	2466828
233	15.8	0.0	0.0	chr22	37273735	37273772	(13544696)	+	MIRc	SINE/MIR	113	150	(118)	2466867
13	11.1	9.8	2.2	chr22	37273862	37273902	(13544566)	+	(TCC)n	Simple_repeat	1	45	(0)	2466868
436	32.1	5.4	3.2	chr22	37334290	37334505	(13483963)	C	MIR	SINE/MIR	(0)	262	42	2467012
265	31.8	11.7	0.8	chr22	37420630	37420759	(13397709)	+	MIR	SINE/MIR	74	219	(43)	2467182
228	30.1	0.0	6.1	chr22	37429012	37429110	(13389358)	+	L2c	LINE/L2	3264	3356	(31)	2467214
240	29.4	11.8	0.0	chr22	37538795	37538932	(13279536)	+	MIRb	SINE/MIR	80	243	(25)	2467472
15	18.1	0.0	0.0	chr22	37539055	37539086	(13279382)	+	GA-rich	Low_complexity	1	32	(0)	2467473
187	22.4	10.8	6.5	chr22	37539106	37539167	(13279301)	C	L2c	LINE/L2	(30)	3357	3293	2467474
1409	20.8	14.9	6.5	chr22	37539236	37539347	(13279121)	+	MLT1D	LTR/ERVL-MaLR	1	107	(398)	2467475
16	18.0	4.5	0.0	chr22	37608817	37608860	(13209608)	+	G-rich	Low_complexity	1	46	(0)	2467651
27	6.1	0.0	0.0	chr22	37650658	37650692	(13167776)	+	(CCGGCT)n	Simple_repeat	1	35	(0)	2467731
12	8.1	3.6	3.5	chr22	37658752	37658779	(13159689)	+	(CGGC)n	Simple_repeat	1	29	(0)	2467752
193	23.2	12.5	0.0	chr22	37686095	37686150	(13132318)	C	L2b	LINE/L2	(3)	3423	3360	2467834
240	30.5	0.0	0.0	chr22	37686835	37686893	(13131575)	C	L2b	LINE/L2	(0)	3375	3317	2467834
423	24.1	10.7	0.0	chr22	37745609	37745752	(13072716)	+	MIRb	SINE/MIR	20	192	(76)	2467967
290	25.0	18.3	0.0	chr22	37767811	37767926	(13050542)	C	MIRc	SINE/MIR	(114)	154	13	2468016
2303	11.7	0.0	0.0	chr22	37781085	37781392	(13037076)	C	AluSc	SINE/Alu	(1)	308	1	2468051
378	26.3	11.3	6.7	chr22	37847813	37848065	(12970403)	C	L2a	LINE/L2	(178)	3248	2983	2468204
274	22.4	0.0	0.0	chr22	37848086	37848134	(12970334)	C	MIR3	SINE/MIR	(117)	91	43	2468216
16	20.7	0.0	4.2	chr22	37905344	37905391	(12913077)	+	(GGCT)n	Simple_repeat	1	48	(0)	2468377
188	29.2	0.0	0.0	chr22	38088436	38088483	(12729985)	+	MIRb	SINE/MIR	221	268	(0)	2468766
443	30.1	2.5	6.1	chr22	38139266	38139409	(12679059)	+	MamGypLTR1d	LTR/Gypsy	610	752	(61)	2468880
2310	7.2	1.0	0.3	chr22	38139416	38139734	(12678734)	C	AluSp	SINE/Alu	(0)	313	1	2468881
353	31.2	0.0	1.5	chr22	38148358	38148487	(12669981)	+	L1MEg	LINE/L1	1	128	(5956)	2468903
1361	29.3	4.3	6.0	chr22	38148550	38148859	(12669609)	+	L1MEg	LINE/L1	236	539	(5545)	2468903
19	26.7	1.6	3.1	chr22	38202654	38202725	(12615743)	+	(GT)n	Simple_repeat	1	70	(0)	2469024
12	7.4	0.0	11.1	chr22	38214831	38214866	(12603602)	+	(CCCGG)n	Simple_repeat	1	36	(0)	2469052
1211	19.6	0.0	1.8	chr22	38216762	38216985	(12601483)	+	AluJb	SINE/Alu	1	220	(92)	2469055
646	11.4	43.1	7.3	chr22	38350342	38350557	(12467911)	C	AluSx	SINE/Alu	(19)	293	1	2469336
198	19.1	2.1	0.0	chr22	38351425	38351471	(12466997)	C	MIR1_Amn	SINE/MIR	(93)	137	90	2469338
15	12.2	0.0	0.0	chr22	38426962	38426988	(12391480)	+	(CCT)n	Simple_repeat	1	27	(0)	2469464
14	23.1	0.0	6.9	chr22	38455963	38456020	(12362448)	+	(CCGC)n	Simple_repeat	1	58	(0)	2469535
13	13.1	2.7	5.3	chr22	38456052	38456088	(12362380)	+	G-rich	Low_complexity	1	38	(0)	2469536
2293	8.9	1.0	2.5	chr22	38802501	38802816	(12015652)	+	AluSz	SINE/Alu	2	312	(0)	2470299
1639	17.9	0.0	4.0	chr22	39018698	39018999	(11799469)	+	AluJb	SINE/Alu	1	290	(22)	2470723
12	15.3	5.3	2.5	chr22	39021600	39021637	(11796831)	+	(CCTAGC)n	Simple_repeat	1	40	(0)	2470729
449	27.4	7.7	0.0	chr22	39268580	39268758	(11549710)	+	MER102a	DNA/hAT-Charlie	39	232	(98)	2471245
312	33.5	10.2	0.6	chr22	39268807	39268983	(11549485)	C	MIRc	SINE/MIR	(50)	218	23	2471246
502	22.6	4.5	1.4	chr22	39299905	39300062	(11518406)	C	MIR	SINE/MIR	(68)	162	5	2471322
2036	6.4	4.8	6.7	chr22	39320326	39320622	(11497846)	C	AluSx3	SINE/Alu	(20)	291	1	2471359
2027	9.0	0.0	0.0	chr22	39320865	39321119	(11497349)	+	AluSx	SINE/Alu	1	255	(57)	2471360
18	28.3	4.6	1.1	chr22	39456974	39457060	(11361408)	+	(CGCA)n	Simple_repeat	1	91	(0)	2471690
191	16.2	2.6	0.0	chr22	39474687	39474723	(11343745)	+	MamTip2	DNA/hAT-Tip100	112	149	(156)	2471723
31	24.2	0.0	6.6	chr22	39598272	39598392	(11220076)	+	(CCGCC)n	Simple_repeat	1	121	(0)	2471985
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
13	23.6	0.0	0.0	chr22	40636655	40636689	(10181779)	+	(CGC)n	Simple_repeat	1	35	(0)	2473972
539	21.2	6.2	6.2	chr22	40694625	40694770	(10123698)	C	MIR	SINE/MIR	(4)	258	113	2474119
352	31.4	7.2	4.2	chr22	40694817	40695032	(10123436)	+	L2c	LINE/L2	2936	3158	(229)	2474120
2219	9.6	0.0	0.0	chr22	40695095	40695411	(10123057)	C	AluSg	SINE/Alu	(0)	310	2	2474121
2467	8.6	0.0	0.0	chr22	40993546	40993846	(9824622)	+	AluSp	SINE/Alu	4	304	(9)	2474841
420	32.9	17.2	3.4	chr22	40993847	40993937	(9824531)	C	L2a	LINE/L2	(2247)	1172	1080	2474836
2448	19.5	10.3	1.5	chr22	41286674	41287360	(9531108)	+	L1MC4	LINE/L1	7288	8042	(0)	2475553
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
23	20.5	1.6	4.1	chr22	41910210	41910277	(8908191)	+	G-rich	Low_complexity	1	66	(0)	2477040
16	6.7	2.9	5.6	chr22	41957929	41957963	(8860505)	+	(CGCC)n	Simple_repeat	1	36	(0)	2477140
15	24.9	0.0	6.2	chr22	42283364	42283436	(8535032)	+	G-rich	Low_complexity	1	68	(0)	2477718
307	29.6	4.3	4.9	chr22	42300487	42300628	(8517840)	C	MIR3	SINE/MIR	(56)	152	12	2477754
262	20.7	0.0	1.9	chr22	42344764	42344839	(8473629)	+	L2b	LINE/L2	3317	3416	(10)	2477842
252	26.9	8.0	1.9	chr22	42368194	42368299	(8450169)	+	MIRc	SINE/MIR	38	150	(118)	2477898
299	32.1	18.1	2.4	chr22	42401954	42402656	(8415812)	C	L2b	LINE/L2	(2)	3373	2043	2477976
275	25.0	8.4	11.8	chr22	42404578	42404628	(8413840)	C	MIRb	SINE/MIR	(23)	245	206	2477982
1815	11.1	1.2	0.0	chr22	42404629	42404872	(8413596)	+	AluSx	SINE/Alu	56	302	(10)	2477983
263	36.6	2.6	3.1	chr22	42742807	42742998	(8075470)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	405	2478834
386	28.4	5.4	1.4	chr22	43600373	43600515	(7217953)	+	MER5A1	DNA/hAT-Charlie	1	149	(17)	2480487
211	31.6	8.4	3.9	chr22	43812772	43812873	(7005595)	+	L2b	LINE/L2	3269	3375	(0)	2480823
1333	19.0	16.4	1.6	chr22	43868171	43868614	(6949854)	C	LTR49	LTR/ERV1	(72)	523	1	2480907
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
511	19.7	24.1	0.0	chr22	44668088	44668229	(6150239)	C	MER5A	DNA/hAT-Charlie	(0)	189	3	2482385
362	27.8	12.0	3.6	chr22	44669941	44670108	(6148360)	+	MER5A	DNA/hAT-Charlie	5	188	(1)	2482389
246	30.2	5.4	10.2	chr22	44918937	44919268	(5899200)	+	L2b	LINE/L2	2921	3286	(101)	2482898
2042	14.6	0.3	3.1	chr22	44948400	44948720	(5869748)	+	AluSz6	SINE/Alu	1	312	(0)	2482938
19076	10.4	1.4	5.5	chr22	44948721	44949020	(5869448)	C	Charlie3	DNA/hAT-Charlie	(328)	2378	2097	2482937
2488	8.4	0.6	0.0	chr22	44949021	44949331	(5869137)	+	AluSp	SINE/Alu	1	313	(0)	2482939
318	34.8	7.8	5.9	chr22	44963969	44964206	(5854262)	+	MIR	SINE/MIR	20	262	(0)	2482958
2024	13.7	0.0	1.4	chr22	44975885	44976177	(5842291)	+	AluJb	SINE/Alu	1	289	(23)	2482976
24	11.9	3.3	4.8	chr22	45010056	45010115	(5808353)	+	(CCCGC)n	Simple_repeat	1	62	(0)	2483037
21	12.8	4.3	6.9	chr22	45010116	45010123	(5808345)	+	(GCCCCC)n	Simple_repeat	2	72	(0)	2483038
367	32.3	9.1	2.1	chr22	45672760	45672952	(5145516)	+	MIRb	SINE/MIR	3	210	(58)	2484359
803	12.7	3.3	1.7	chr22	46376716	46376833	(4441635)	+	AluSc	SINE/Alu	190	309	(0)	2485437
247	33.9	0.8	1.7	chr22	48796798	48796917	(2021551)	+	MER5A	DNA/hAT-Charlie	4	122	(67)	2488618
240	26.9	9.0	4.7	chr22	49450386	49450533	(1367935)	+	HAL1ME	LINE/L1	1122	1276	(1189)	2489384
431	29.4	4.8	7.8	chr22	49852801	49852929	(965539)	C	MER58B	DNA/hAT-Charlie	(177)	164	29	2489840
15	8.6	7.7	2.4	chr22	50170961	50170999	(647469)	+	(GGCGCGG)n	Simple_repeat	1	42	(0)	2490294
238	28.6	5.1	0.0	chr3	7788368	7788423	(190507136)	+	L2b	LINE/L2	3302	3360	(15)	2504327
21	10.4	0.0	0.0	chr3	7788460	7788490	(190507069)	+	(AC)n	Simple_repeat	1	31	(0)	2504331
185	37.5	2.8	0.9	chr3	7788533	7788637	(190506922)	C	MIR	SINE/MIR	(154)	108	2	2504332
791	22.3	0.5	3.1	chr3	7789395	7789588	(190505971)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2504334
235	30.9	4.5	3.8	chr3	7789714	7789844	(190505715)	+	MER102b	DNA/hAT-Charlie	108	239	(102)	2504335
1589	22.2	3.5	1.1	chr3	8380706	8381070	(189914489)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	2505251
556	15.5	0.0	0.0	chr3	8381072	8381168	(189914391)	+	MLT1A-int	LTR/ERVL-MaLR	1	97	(1638)	2505251
936	17.4	6.3	0.5	chr3	8381165	8381372	(189914187)	+	MLT1A-int	LTR/ERVL-MaLR	1515	1735	(0)	2505251
2085	16.2	0.0	0.0	chr3	9195675	9195982	(189099577)	+	AluJo	SINE/Alu	2	309	(3)	2506702
189	36.1	11.5	0.9	chr3	9196044	9196152	(189099407)	C	L2c	LINE/L2	(215)	3172	3051	2506703
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
403	27.3	9.6	0.0	chr3	9914951	9915100	(188380459)	+	MER91A	DNA/hAT-Tip100	20	185	(11)	2508245
374	35.4	0.0	13.3	chr3	9941274	9941508	(188354051)	C	L2b	LINE/L2	(67)	3308	3107	2508309
2420	6.9	0.7	0.3	chr3	9986936	9987241	(188308318)	+	AluY	SINE/Alu	3	309	(2)	2508419
286	30.7	10.4	4.1	chr3	10250658	10250854	(188044705)	C	Charlie13b	DNA/hAT-Charlie	(15)	497	287	2509050
181	39.2	0.0	0.0	chr3	10344191	10344264	(187951295)	+	MIRc	SINE/MIR	66	139	(129)	2509219
254	32.5	6.6	1.7	chr3	10723999	10724191	(187571368)	C	MIR3	SINE/MIR	(15)	253	39	2509994
19	29.9	5.8	1.1	chr3	10784330	10784416	(187511143)	+	GA-rich	Low_complexity	1	92	(0)	2510113
6548	18.6	16.5	7.0	chr3	11091683	11093583	(187201976)	+	MER52D	LTR/ERV1	7	2123	(0)	2510739
304	30.4	17.4	0.7	chr3	11196030	11196329	(187099230)	+	L2b	LINE/L2	2753	3099	(288)	2510969
850	8.3	1.8	0.0	chr3	11196410	11196517	(187099042)	C	AluSq	SINE/Alu	(15)	298	189	2510970
286	32.4	4.3	0.9	chr3	11220246	11220357	(187075202)	+	MIRc	SINE/MIR	22	137	(131)	2511034
2161	10.0	4.9	0.3	chr3	11754709	11754999	(186540560)	C	AluSx	SINE/Alu	(7)	305	1	2512027
987	30.0	12.2	1.7	chr3	11916741	11917462	(186378097)	C	L2a	LINE/L2	(0)	3426	2608	2512329
218	31.5	8.4	0.0	chr3	13092508	13092639	(185202920)	C	L2a	LINE/L2	(128)	3247	3096	2514628
244	25.3	4.6	3.5	chr3	13114042	13114127	(185181432)	+	L1ME3G	LINE/L1	713	799	(125)	2514670
17	26.5	6.3	2.0	chr3	13260102	13260196	(185035363)	+	G-rich	Low_complexity	1	101	(0)	2514921
12	9.8	0.0	0.0	chr3	13262284	13262305	(185033254)	+	(AAAT)n	Simple_repeat	1	22	(0)	2514923
280	20.9	2.7	0.0	chr3	13262419	13262488	(185033071)	+	MIRb	SINE/MIR	100	177	(91)	2514924
2265	19.0	5.4	3.6	chr3	13262529	13262993	(185032566)	+	L1MB3	LINE/L1	5610	6100	(83)	2514925
2224	8.1	1.8	0.3	chr3	13303143	13303425	(184992134)	C	AluSc	SINE/Alu	(14)	295	9	2515007
742	24.2	0.0	0.6	chr3	13303442	13303607	(184991952)	C	MIR	SINE/MIR	(65)	197	33	2515008
245	32.6	1.6	1.6	chr3	13347197	13347296	(184948263)	+	L2c	LINE/L2	3276	3400	(26)	2515074
390	32.4	3.3	3.6	chr3	13389347	13389572	(184905987)	C	MIRc	SINE/MIR	(33)	235	8	2515141
30	15.9	8.6	2.6	chr3	13637201	13637305	(184658254)	+	GA-rich	Low_complexity	1	114	(0)	2515659
345	32.6	1.7	1.5	chr3	13637335	13637475	(184658084)	C	MIRc	SINE/MIR	(62)	206	55	2515660
2227	11.4	0.7	0.0	chr3	13727752	13728050	(184567509)	C	AluSc8	SINE/Alu	(10)	301	1	2515808
7071	24.2	6.8	4.1	chr3	13728051	13728751	(184566808)	C	L1MDa	LINE/L1	(5632)	1001	34	2515805
244	27.1	1.4	0.0	chr3	13896181	13896250	(184399309)	+	MIRb	SINE/MIR	113	183	(85)	2516118
830	25.5	12.6	5.5	chr3	14216115	14216475	(184079084)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	196	2516482
550	28.6	3.7	1.6	chr3	14216731	14216915	(184078644)	+	MER117	DNA/hAT-Charlie	3	191	(6)	2516483
312	33.3	7.5	0.0	chr3	14351332	14351517	(183944042)	+	L2b	LINE/L2	3127	3327	(48)	2516750
330	33.7	3.5	0.0	chr3	14351544	14351707	(183943852)	+	MIRc	SINE/MIR	23	199	(69)	2516751
227	28.2	14.5	4.6	chr3	14426073	14426202	(183869357)	+	MIR3	SINE/MIR	37	181	(27)	2516935
373	29.4	4.1	1.3	chr3	14426230	14426378	(183869181)	+	MIRc	SINE/MIR	51	208	(60)	2516936
1012	13.6	0.0	0.0	chr3	14517527	14517666	(183777893)	C	AluJb	SINE/Alu	(37)	275	136	2517111
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
324	28.1	2.9	9.5	chr3	15103245	15103433	(183192126)	C	MER91A	DNA/hAT-Tip100	(0)	196	21	2518184
1014	32.1	10.8	7.0	chr3	17441898	17442825	(180852734)	+	L1MD2	LINE/L1	21	988	(5559)	2521872
28	25.8	5.9	1.6	chr3	17442861	17442979	(180852580)	+	GA-rich	Low_complexity	1	126	(0)	2521873
959	20.3	2.9	0.0	chr3	17442980	17443181	(180852378)	+	L1MD2	LINE/L1	1019	1226	(5414)	2521872
5826	14.1	5.1	2.5	chr3	17518134	17519082	(180776477)	+	LTR1D	LTR/ERV1	1	975	(0)	2521964
1755	23.5	6.0	0.8	chr3	17954279	17954768	(180340791)	C	L1MC5a	LINE/L1	(107)	2670	2154	2522643
271	28.8	6.0	3.9	chr3	17954801	17954930	(180340629)	C	LTR33	LTR/ERVL	(151)	364	232	2522644
442	27.4	7.9	0.6	chr3	17954964	17955128	(180340431)	C	LTR33	LTR/ERVL	(337)	178	1	2522644
5321	20.9	7.4	11.7	chr3	17955129	17955606	(180339953)	C	L1MC5a	LINE/L1	(815)	1962	1527	2522643
835	20.6	3.2	0.6	chr3	18236554	18236734	(180058825)	+	MER5A	DNA/hAT-Charlie	1	186	(3)	2523064
564	29.2	2.6	0.5	chr3	18237039	18237224	(180058335)	+	MIR	SINE/MIR	73	262	(0)	2523065
27	20.5	3.3	4.3	chr3	18425323	18425413	(179870146)	+	GA-rich	Low_complexity	1	94	(0)	2523272
13	18.2	0.0	0.0	chr3	18425482	18425512	(179870047)	+	G-rich	Low_complexity	1	31	(0)	2523273
20	30.1	2.4	4.2	chr3	18425756	18425861	(179869698)	+	G-rich	Low_complexity	1	104	(0)	2523274
733	29.7	10.7	7.5	chr3	19013895	19014480	(179281079)	C	MamGypLTR1a	LTR/Gypsy	(6)	778	172	2524110
2815	17.8	13.6	9.2	chr3	19233731	19234805	(179060754)	C	LTR12D	LTR/ERV1	(123)	1131	3	2524397
290	33.8	6.3	4.0	chr3	23704041	23704367	(174591192)	C	L2b	LINE/L2	(93)	3294	2960	2530586
298	26.7	16.6	1.2	chr3	23802023	23802185	(174493374)	+	L1ME4b	LINE/L1	694	886	(6)	2530804
12	16.9	0.0	0.0	chr3	24494523	24494549	(173801010)	+	(CGCC)n	Simple_repeat	1	27	(0)	2531964
12	8.1	3.6	3.5	chr3	24495702	24495729	(173799830)	+	(GCCCG)n	Simple_repeat	1	29	(0)	2531968
2302	11.2	0.3	0.0	chr3	25149920	25150215	(173145344)	+	AluSx1	SINE/Alu	1	297	(15)	2532936
215	24.7	5.9	3.3	chr3	27731748	27731825	(170563734)	C	L2a	LINE/L2	(15)	3411	3282	2536655
5957	12.1	1.2	0.9	chr3	31142232	31143122	(167152437)	+	MER4D	LTR/ERV1	1	894	(9)	2541624
1639	17.2	6.7	7.7	chr3	31570665	31571104	(166724455)	C	MER31B	LTR/ERV1	(31)	435	1	2542306
732	21.7	3.1	0.0	chr3	31882372	31882528	(166413031)	+	MER5A1	DNA/hAT-Charlie	5	166	(0)	2542789
502	21.7	3.4	2.5	chr3	31882542	31882659	(166412900)	+	MLT1J1	LTR/ERVL-MaLR	24	142	(302)	2542790
22	7.4	0.0	0.0	chr3	31882662	31882690	(166412869)	+	(CA)n	Simple_repeat	1	29	(0)	2542791
323	27.2	8.7	3.1	chr3	31882712	31882874	(166412685)	+	MLT1J1	LTR/ERVL-MaLR	276	448	(0)	2542790
2035	6.6	0.0	0.4	chr3	31941993	31942236	(166353323)	+	AluY	SINE/Alu	1	243	(68)	2542902
2124	9.8	5.6	0.0	chr3	31942270	31942555	(166353004)	+	AluSx1	SINE/Alu	1	303	(9)	2542903
401	10.6	2.6	12.9	chr3	31967262	31967346	(166328213)	C	AluJr	SINE/Alu	(186)	126	51	2542948
1064	11.4	0.0	2.0	chr3	31967350	31967498	(166328061)	+	AluJb	SINE/Alu	156	301	(11)	2542949
41	9.3	0.0	0.0	chr3	31980806	31980863	(166314696)	+	(CA)n	Simple_repeat	1	58	(0)	2542974
17	14.2	0.0	0.0	chr3	32816652	32816682	(165478877)	+	(GAG)n	Simple_repeat	1	31	(0)	2544751
278	26.3	12.6	7.8	chr3	32838010	32838137	(165457422)	C	L2b	LINE/L2	(1)	3374	3240	2544785
900	20.6	10.6	7.3	chr3	32934363	32934635	(165360924)	+	Charlie1a	DNA/hAT-Charlie	1	283	(1172)	2544977
13	25.0	2.7	5.3	chr3	33097152	33097224	(165198335)	+	(CCCGCGC)n	Simple_repeat	1	75	(0)	2545277
272	17.6	4.2	5.6	chr3	33097529	33097600	(165197959)	+	MER5A	DNA/hAT-Charlie	5	75	(114)	2545278
2330	6.8	0.0	0.0	chr3	33097601	33097878	(165197681)	+	AluSq2	SINE/Alu	15	292	(21)	2545279
2219	7.4	0.0	0.0	chr3	33717420	33717690	(164577869)	C	AluSg	SINE/Alu	(5)	305	35	2546318
571	30.8	8.7	2.9	chr3	33786856	33787199	(164508360)	+	MamGypLTR3a	LTR/Gypsy	108	473	(508)	2546457
954	11.7	0.0	0.0	chr3	33787328	33787455	(164508104)	C	AluSx3	SINE/Alu	(16)	295	168	2546458
15	14.8	2.6	2.5	chr3	36380394	36380432	(161915127)	+	(GGCGG)n	Simple_repeat	1	40	(0)	2549821
12	16.9	8.3	1.9	chr3	36380462	36380509	(161915050)	+	G-rich	Low_complexity	1	52	(0)	2549822
427	28.6	6.9	3.3	chr3	37232784	37232821	(161062738)	C	MIR	SINE/MIR	(69)	193	152	2551232
11026	6.5	9.4	1.3	chr3	37232822	37234268	(161061291)	+	LTR12C	LTR/ERV1	3	1579	(0)	2551233
504	29.4	11.6	2.7	chr3	37543322	37543541	(160752018)	+	MIRb	SINE/MIR	7	248	(20)	2551734
822	27.4	13.4	2.6	chr3	37825782	37826126	(160469433)	C	MLT1J	LTR/ERVL-MaLR	(19)	493	106	2552136
280	26.8	7.6	0.0	chr3	38039699	38039795	(160255764)	C	L2a	LINE/L2	(27)	3399	3295	2552430
196	27.9	0.0	11.6	chr3	38112796	38112864	(160182695)	C	L2b	LINE/L2	(26)	3349	3289	2552541
569	25.7	6.8	0.7	chr3	38150626	38150778	(160144781)	+	MER5A1	DNA/hAT-Charlie	4	166	(0)	2552583
13	9.3	0.0	0.0	chr3	38314974	38314996	(159980563)	+	(AGGC)n	Simple_repeat	1	23	(0)	2552837
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
861	9.4	0.0	0.0	chr3	38578877	38578982	(159716577)	C	AluSz	SINE/Alu	(206)	106	1	2553242
208	29.2	5.3	0.0	chr3	39152296	39152367	(159143192)	C	L2b	LINE/L2	(541)	2878	2803	2554040
543	31.6	7.0	0.0	chr3	42062903	42063089	(156232470)	C	MIRc	SINE/MIR	(47)	221	21	2558477
980	21.7	4.8	0.0	chr3	42063092	42063289	(156232270)	+	MER58A	DNA/hAT-Charlie	17	224	(0)	2558478
2477	7.4	0.0	0.0	chr3	42078472	42078769	(156216790)	+	AluY	SINE/Alu	1	298	(13)	2558512
26	0.0	0.0	0.0	chr3	42078770	42078794	(156216765)	+	(AAAG)n	Simple_repeat	1	25	(0)	2558513
1485	22.7	7.7	11.7	chr3	42078795	42079213	(156216346)	+	MLT1E2	LTR/ERVL-MaLR	216	626	(1)	2558511
771	21.4	0.0	0.0	chr3	42369902	42370032	(155925527)	+	FLAM_A	SINE/Alu	2	132	(10)	2558971
13	19.0	0.0	5.0	chr3	42370259	42370299	(155925260)	+	(CCCCAC)n	Simple_repeat	1	38	(0)	2558972
214	30.7	10.6	1.6	chr3	42443836	42443964	(155851595)	C	MIR	SINE/MIR	(124)	144	3	2559119
275	21.5	5.8	0.0	chr3	42582530	42582594	(155712965)	C	L2c	LINE/L2	(0)	3387	3319	2559339
521	27.9	2.4	5.5	chr3	43622605	43622858	(154672701)	+	L2a	LINE/L2	2996	3241	(185)	2560883
228	31.4	6.1	7.7	chr3	45510442	45510624	(152784935)	C	L2c	LINE/L2	(110)	3277	3098	2563952
680	24.6	11.4	4.7	chr3	46007516	46007741	(152287818)	C	L2a	LINE/L2	(55)	3371	3129	2564762
852	14.4	0.0	0.0	chr3	46007743	46007860	(152287699)	+	AluJo	SINE/Alu	1	118	(194)	2564764
343	27.7	2.6	1.8	chr3	46619764	46619877	(151675682)	C	L2c	LINE/L2	(273)	3114	3000	2565697
373	27.3	11.5	3.0	chr3	46620163	46620328	(151675231)	+	LTR33A	LTR/ERVL	105	286	(234)	2565698
378	27.4	11.7	3.7	chr3	46629879	46630151	(151665408)	C	LTR33A	LTR/ERVL	(77)	443	146	2565709
12	22.4	0.0	2.6	chr3	47803441	47803478	(150492081)	+	G-rich	Low_complexity	1	38	(0)	2568028
15	18.5	1.5	0.0	chr3	47841071	47841111	(150454448)	+	GA-rich	Low_complexity	1	41	(0)	2568123
1956	21.2	3.7	8.8	chr3	47842069	47842718	(150452841)	+	LTR6A	LTR/ERV1	1	564	(0)	2568124
749	17.6	3.1	8.8	chr3	48089409	48089613	(150205946)	+	MER33	DNA/hAT-Charlie	27	219	(105)	2568630
1874	14.5	0.0	0.4	chr3	48091214	48091489	(150204070)	C	AluJr	SINE/Alu	(35)	277	3	2568636
180	23.9	2.1	0.0	chr3	48434025	48434070	(149861489)	+	MER5A	DNA/hAT-Charlie	1	47	(142)	2569303
203	38.3	11.7	2.1	chr3	48434163	48434354	(149861205)	C	MIRb	SINE/MIR	(48)	220	8	2569304
13	10.4	6.5	0.0	chr3	48504173	48504203	(149791356)	+	(CCCTCG)n	Simple_repeat	1	33	(0)	2569463
37	8.9	0.0	9.3	chr3	48504228	48504313	(149791246)	+	GA-rich	Low_complexity	1	86	(0)	2569464
259	35.5	1.1	0.0	chr3	48504577	48504669	(149790890)	+	MIRb	SINE/MIR	172	265	(3)	2569465
13	8.5	0.0	3.7	chr3	48685810	48685836	(149609723)	+	(GGCAG)n	Simple_repeat	1	27	(0)	2569696
17	26.6	5.3	3.0	chr3	48685860	48685954	(149609605)	+	(CGCCG)n	Simple_repeat	1	100	(0)	2569697
72	0.0	0.0	1.5	chr3	49911179	49911246	(148384313)	+	(AGAT)n	Simple_repeat	1	68	(0)	2572181
17	0.0	0.0	0.0	chr3	49911249	49911269	(148384290)	+	(TTG)n	Simple_repeat	1	21	(0)	2572182
204	29.3	12.8	2.4	chr3	50078962	50079045	(148216514)	C	L2b	LINE/L2	(52)	3323	3230	2572594
43	16.1	4.0	1.0	chr3	50157319	50157417	(148138142)	+	(CTCC)n	Simple_repeat	1	103	(0)	2572714
12	12.0	0.0	6.5	chr3	50236139	50236169	(148059390)	+	(CGCCC)n	Simple_repeat	1	31	(0)	2572805
24	14.4	0.0	6.6	chr3	50236264	50236324	(148059235)	+	G-rich	Low_complexity	1	61	(0)	2572806
12	23.5	5.1	3.2	chr3	50321388	50321464	(147974095)	+	(CCAGC)n	Simple_repeat	1	78	(0)	2572910
12	15.2	3.9	7.5	chr3	50322781	50322831	(147972728)	+	(TCCC)n	Simple_repeat	1	53	(0)	2572911
14	11.0	0.0	5.9	chr3	50337380	50337417	(147958142)	+	(GCGTGC)n	Simple_repeat	1	35	(0)	2572924
12	16.9	0.0	0.0	chr3	50341022	50341048	(147954511)	+	(CCTT)n	Simple_repeat	1	27	(0)	2572929
277	31.8	0.0	0.0	chr3	50616271	50616333	(147679226)	+	MIR3	SINE/MIR	85	147	(61)	2573287
194	38.4	5.9	5.2	chr3	50637251	50637363	(147658196)	C	L2c	LINE/L2	(40)	3347	3235	2573324
2423	6.0	4.2	0.0	chr3	50637364	50637661	(147657898)	+	AluYj4	SINE/Alu	1	311	(0)	2573325
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
24	24.2	3.6	2.4	chr3	51706982	51707105	(146588454)	+	G-rich	Low_complexity	1	125	(0)	2574851
14	20.9	5.1	3.2	chr3	51955866	51955924	(146339635)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2575221
350	21.8	5.6	7.3	chr3	52057014	52057190	(146238369)	C	L2a	LINE/L2	(5)	3421	3199	2575387
268	33.6	10.7	3.8	chr3	52704709	52704996	(145590563)	+	L2b	LINE/L2	3066	3375	(0)	2576321
611	29.1	5.0	1.7	chr3	53159248	53159481	(145136078)	+	MIRb	SINE/MIR	27	268	(0)	2577109
22	11.2	0.0	2.4	chr3	53161850	53161890	(145133669)	+	(CCCCAC)n	Simple_repeat	1	41	(0)	2577115
246	30.2	16.1	0.7	chr3	53171624	53171837	(145123722)	C	L2c	LINE/L2	(187)	3188	2941	2577132
435	30.3	8.3	0.0	chr3	53194371	53194525	(145101034)	+	MIRc	SINE/MIR	2	170	(98)	2577175
26	21.9	4.7	1.1	chr3	53256022	53256107	(145039452)	+	G-rich	Low_complexity	1	90	(0)	2577297
13	18.1	0.0	7.0	chr3	53256129	53256171	(145039388)	+	(GCCCC)n	Simple_repeat	1	43	(0)	2577298
15	17.1	2.4	2.4	chr3	53494202	53494242	(144801317)	+	(GGAGCC)n	Simple_repeat	1	42	(0)	2577717
341	12.5	1.8	0.0	chr3	53521340	53521395	(144774164)	C	L1MB8	LINE/L1	(943)	5203	5147	2577753
228	34.0	8.7	2.6	chr3	53521413	53521563	(144773996)	C	MIR3	SINE/MIR	(14)	194	34	2577757
563	24.3	8.3	12.1	chr3	53521745	53521845	(144773714)	C	MER3	DNA/hAT-Charlie	(3)	206	110	2577758
278	31.4	4.9	3.5	chr3	53763834	53763975	(144531584)	+	MIRc	SINE/MIR	125	268	(0)	2578057
15	24.5	0.0	0.0	chr3	53791303	53791344	(144504215)	+	GA-rich	Low_complexity	1	42	(0)	2578086
17	9.3	2.8	2.7	chr3	53791402	53791437	(144504122)	+	(AAAATTA)n	Simple_repeat	1	37	(0)	2578087
1641	26.0	4.0	4.5	chr3	53970988	53971495	(144324064)	+	MLT1J	LTR/ERVL-MaLR	7	511	(1)	2578325
16	12.9	4.3	4.2	chr3	54121890	54121935	(144173624)	+	(GCCCCA)n	Simple_repeat	1	48	(0)	2578600
482	27.8	12.6	2.5	chr3	54139957	54140155	(144155404)	+	MIRb	SINE/MIR	47	268	(0)	2578619
1128	15.6	3.2	7.8	chr3	55666547	55666776	(142628783)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2580828
369	34.7	0.0	0.7	chr3	55666781	55666925	(142628634)	+	MIR	SINE/MIR	21	164	(98)	2580829
322	34.1	2.6	3.7	chr3	56102141	56102411	(142193148)	C	MER102a	DNA/hAT-Charlie	(2)	328	61	2581506
2509	9.9	0.0	0.3	chr3	56446614	56446926	(141848633)	C	AluSz	SINE/Alu	(0)	312	1	2582148
661	25.8	26.2	5.7	chr3	56446927	56447155	(141848404)	C	LTR16C	LTR/ERVL	(139)	350	1	2582147
280	27.7	14.2	4.8	chr3	56447165	56447437	(141848122)	+	MamGypLTR3	LTR/Gypsy	478	780	(114)	2582146
182	29.6	5.3	5.3	chr3	57037343	57037417	(141258142)	+	MamRTE1	LINE/RTE-BovB	1365	1439	(2373)	2583226
3055	17.8	5.5	8.0	chr3	57179647	57180426	(141115133)	+	LTR41	LTR/ERVL	3	762	(6)	2583477
2979	11.2	2.1	5.8	chr3	57820523	57821005	(140474554)	+	MER52-int	LTR/ERV1	1739	2203	(4888)	2584730
311	18.1	27.6	5.4	chr3	57956935	57957045	(140338514)	C	MIRc	SINE/MIR	(80)	150	6	2585018
13	14.5	3.2	0.0	chr3	58008464	58008494	(140287065)	+	(CCCGCT)n	Simple_repeat	1	32	(0)	2585183
249	23.6	1.4	2.7	chr3	58236732	58236805	(140058754)	C	L2c	LINE/L2	(224)	3163	3091	2585625
195	29.1	6.4	2.9	chr3	58237093	58237205	(140058354)	+	MIRb	SINE/MIR	60	185	(83)	2585626
19	31.7	1.0	3.8	chr3	58237792	58237895	(140057664)	+	G-rich	Low_complexity	1	105	(0)	2585629
15	16.5	8.9	1.6	chr3	58332712	58332767	(139962792)	+	(GCGCAG)n	Simple_repeat	1	61	(0)	2585826
5897	11.8	0.7	2.3	chr3	58441459	58442376	(139853183)	C	MER4D	LTR/ERV1	(0)	903	1	2586017
17	18.4	0.0	0.0	chr3	58485040	58485070	(139810489)	+	(AC)n	Simple_repeat	1	31	(0)	2586110
210	31.9	6.9	7.8	chr3	58526755	58526856	(139768703)	C	MIRb	SINE/MIR	(90)	178	78	2586176
284	19.4	13.1	6.1	chr3	58527051	58527149	(139768410)	+	MLT1A	LTR/ERVL-MaLR	7	113	(261)	2586177
12281	16.7	1.6	7.2	chr3	59149285	59150620	(139144939)	C	L1M4c	LINE/L1	(5029)	1302	5	2587090
605	27.9	7.4	0.0	chr3	60610853	60611053	(137684506)	+	MIRb	SINE/MIR	3	219	(49)	2589259
775	21.2	2.1	0.0	chr3	61885704	61885840	(136409719)	C	AluJr	SINE/Alu	(32)	280	141	2591405
16	0.0	0.0	0.0	chr3	62873618	62873634	(135421925)	+	(T)n	Simple_repeat	1	17	(0)	2593025
486	22.2	7.4	3.0	chr3	63521734	63521900	(134773659)	C	LTR33	LTR/ERVL	(1)	514	340	2594192
611	22.6	1.9	1.3	chr3	63521879	63522035	(134773524)	C	LTR33	LTR/ERVL	(339)	176	19	2594192
274	33.6	1.6	3.2	chr3	63522036	63522161	(134773398)	+	MIRb	SINE/MIR	100	223	(45)	2594182
320	29.2	20.0	2.4	chr3	63523234	63523534	(134772025)	+	LTR33	LTR/ERVL	2	357	(158)	2594195
3284	15.1	0.8	11.9	chr3	63794802	63795515	(134500044)	+	MER51A	LTR/ERV1	1	634	(0)	2594670
1574	28.4	16.4	7.4	chr3	63795516	63795922	(134499637)	+	L2	LINE/L2	2117	2639	(780)	2594666
1164	29.2	6.2	3.2	chr3	64255652	64256147	(134039412)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	2595394
607	30.2	11.0	3.0	chr3	65025916	65026292	(133269267)	C	L2c	LINE/L2	(0)	3387	2975	2596775
507	34.1	3.8	3.8	chr3	65026423	65026657	(133268902)	+	MIRb	SINE/MIR	19	253	(15)	2596776
243	33.0	5.0	0.0	chr3	65572524	65572617	(132722942)	+	L3	LINE/CR1	3962	4060	(39)	2597634
262	30.7	22.4	1.2	chr3	65572678	65572842	(132722717)	C	MIRb	SINE/MIR	(46)	222	13	2597636
393	28.5	8.9	0.9	chr3	65732880	65733033	(132562526)	C	MER102c	DNA/hAT-Charlie	(41)	290	153	2597902
343	24.1	1.2	0.0	chr3	66036214	66036296	(132259263)	C	MIR	SINE/MIR	(3)	259	176	2598515
202	32.9	11.2	1.8	chr3	66036377	66036546	(132259013)	C	L2b	LINE/L2	(65)	3322	3132	2598516
12	17.4	0.0	8.7	chr3	66448795	66448840	(131846719)	+	(GGATTAA)n	Simple_repeat	1	46	(0)	2599230
1386	25.7	4.5	8.7	chr3	67635463	67635978	(130659581)	C	L1MEb	LINE/L1	(5550)	520	28	2601125
484	10.7	5.1	0.0	chr3	67989728	67989802	(130305757)	C	MADE1	DNA/TcMar-Mariner	(0)	80	2	2601731
298	34.9	8.8	1.7	chr3	67989842	67990138	(130305421)	+	L2a	LINE/L2	3089	3408	(18)	2601732
8941	18.4	3.1	0.2	chr3	70614529	70616129	(127679430)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	2	2606047
2476	21.7	9.6	0.5	chr3	71151891	71152469	(127143090)	+	MLT1E	LTR/ERVL-MaLR	17	653	(0)	2606783
388	28.7	4.4	0.0	chr3	72335004	72335111	(125960448)	C	L2c	LINE/L2	(228)	3159	3047	2608979
157	22.9	4.5	1.2	chr3	72337237	72337700	(125957859)	+	(GT)n	Simple_repeat	1	485	(0)	2608982
902	25.0	3.1	1.2	chr3	73748049	73748299	(124547260)	+	MIR	SINE/MIR	6	261	(1)	2611683
22427	13.2	2.1	0.3	chr3	75503738	75506913	(122788646)	C	HERVS71-int	LTR/ERV1	(5742)	3236	4	2614330
374	29.6	4.0	5.2	chr3	89974879	89975031	(108320528)	C	LTR85c	LTR/Gypsy?	(274)	549	399	2632628
17	27.1	3.5	3.4	chr3	97269217	97269301	(101026258)	+	(TTCTTC)n	Simple_repeat	1	88	(0)	2637615
585	21.9	7.4	1.3	chr3	97269397	97269549	(101026010)	C	MER5A1	DNA/hAT-Charlie	(3)	163	1	2637616
562	24.4	1.5	2.2	chr3	97269564	97269701	(101025858)	C	MER5B	DNA/hAT-Charlie	(9)	169	33	2637617
323	36.5	6.6	2.5	chr3	98890966	98891125	(99404434)	C	L2b	LINE/L2	(18)	3357	3191	2639586
22	17.3	0.0	0.0	chr3	98891140	98891178	(99404381)	+	(GT)n	Simple_repeat	1	39	(0)	2639587
33	18.4	0.0	0.0	chr3	98891178	98891241	(99404318)	+	GA-rich	Low_complexity	1	64	(0)	2639588
20	18.9	2.1	0.0	chr3	98891216	98891263	(99404296)	+	A-rich	Low_complexity	1	49	(0)	2639589
12	7.4	0.0	11.1	chr3	98891289	98891324	(99404235)	+	GA-rich	Low_complexity	1	36	(0)	2639590
547	32.3	6.6	2.5	chr3	98891451	98891856	(99403703)	+	L2c	LINE/L2	2721	3156	(270)	2639582
985	28.6	14.8	3.1	chr3	101518087	101518533	(96777026)	C	L2a	LINE/L2	(8)	3418	2911	2643101
468	23.8	8.1	2.6	chr3	101518578	101518728	(96776831)	C	L2	LINE/L2	(410)	3009	2850	2643102
3102	17.3	9.7	2.2	chr3	101518733	101519353	(96776206)	C	L1MCa	LINE/L1	(5836)	672	1	2643103
3595	16.9	6.5	4.2	chr3	101530223	101530982	(96764577)	C	LTR19C	LTR/ERV1	(0)	779	1	2643122
52313	17.9	1.7	1.8	chr3	101632600	101641508	(96654051)	+	HERVS71-int	LTR/ERV1	4	8909	(69)	2643354
180	21.1	21.1	1.1	chr3	101780725	101780815	(96514744)	+	L2a	LINE/L2	3233	3346	(80)	2643596
40	2.5	0.0	0.0	chr3	101849216	101849256	(96446303)	+	(GGAGGCG)n	Simple_repeat	1	41	(0)	2643700
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
367	27.9	9.8	4.3	chr3	105397898	105398013	(92897546)	C	L2a	LINE/L2	(4)	3422	3300	2648214
976	19.9	0.5	0.0	chr3	105398018	105398203	(92897356)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	2648215
267	28.7	17.2	0.0	chr3	107977629	107977784	(90317775)	C	MER91A	DNA/hAT-Tip100	(1)	195	16	2651634
1925	16.5	11.5	0.8	chr3	108471414	108471815	(89823744)	+	MER31B	LTR/ERV1	1	451	(15)	2652327
283	27.4	0.0	11.6	chr3	108471881	108471975	(89823584)	+	MIRb	SINE/MIR	64	147	(121)	2652328
1227	28.0	6.9	1.1	chr3	108540151	108540518	(89755041)	+	MLT1I	LTR/ERVL-MaLR	19	409	(2)	2652445
2316	11.8	0.3	0.0	chr3	109189541	109189845	(89105714)	C	AluSx1	SINE/Alu	(6)	306	1	2653398
11302	14.0	3.6	2.5	chr3	110705475	110708636	(87586923)	C	L1MA3	LINE/L1	(2049)	5513	1595	2655580
14	12.9	2.8	2.7	chr3	111072372	111072407	(87223152)	+	(GCCCGCG)n	Simple_repeat	1	37	(0)	2656047
17	20.8	9.8	0.0	chr3	111082358	111082418	(87213141)	+	GA-rich	Low_complexity	1	67	(0)	2656065
193	35.9	6.2	9.2	chr3	111211409	111211776	(87083783)	+	L2c	LINE/L2	3020	3375	(12)	2656243
2151	18.1	7.9	3.3	chr3	112354645	112355125	(85940434)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2657693
24	12.5	5.8	0.0	chr3	112561652	112561703	(85733856)	+	(GACGG)n	Simple_repeat	1	55	(0)	2658010
896	24.0	10.1	9.5	chr3	112734432	112734767	(85560792)	C	MER46C	DNA/TcMar-Tigger	(0)	338	1	2658225
360	28.3	6.6	0.0	chr3	113018992	113019104	(85276455)	C	MIRc	SINE/MIR	(38)	230	110	2658588
215	32.7	4.7	0.0	chr3	113210432	113210532	(85085027)	+	MIR3	SINE/MIR	62	167	(41)	2658904
968	15.0	6.5	0.0	chr3	113210619	113210791	(85084768)	+	MER5A	DNA/hAT-Charlie	3	187	(2)	2658905
18	17.7	0.0	0.0	chr3	113696645	113696676	(84598883)	+	(C)n	Simple_repeat	1	32	(0)	2659588
11635	18.6	3.0	3.8	chr3	115452840	115453145	(82842414)	C	L1MC3	LINE/L1	(16)	8187	7876	2662137
33	0.0	0.0	0.0	chr3	115453146	115453176	(82842383)	+	(TTTG)n	Simple_repeat	1	31	(0)	2662138
13789	19.0	3.9	3.0	chr3	115453177	115458635	(82836924)	C	L1MC3	LINE/L1	(328)	7875	2367	2662137
13	18.9	2.8	0.0	chr3	119579862	119579897	(78715662)	+	(CCCCGCC)n	Simple_repeat	1	37	(0)	2667826
24	23.3	5.2	5.7	chr3	119702855	119702988	(78592571)	+	(TCC)n	Simple_repeat	1	141	(0)	2668038
938	19.4	1.1	1.6	chr3	120209384	120209566	(78085993)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	2668828
209	34.2	6.7	0.9	chr3	120209580	120209691	(78085868)	C	L2b	LINE/L2	(260)	3115	2997	2668827
15	28.3	0.0	0.0	chr3	120307893	120307939	(77987620)	+	(CAG)n	Simple_repeat	1	47	(0)	2668962
726	27.7	2.6	0.9	chr3	120449140	120449361	(77846198)	+	MIRb	SINE/MIR	32	257	(11)	2669167
12	18.6	0.0	7.1	chr3	120451293	120451334	(77844225)	+	(GGC)n	Simple_repeat	1	42	(0)	2669169
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
211	31.3	11.5	1.7	chr3	122759037	122759153	(75536406)	C	MIR3	SINE/MIR	(62)	146	17	2672560
40	0.0	0.0	0.0	chr3	122759186	122759219	(75536340)	+	(CA)n	Simple_repeat	1	34	(0)	2672561
320	30.6	3.6	2.2	chr3	122759429	122759565	(75535994)	C	Tigger16b	DNA/TcMar-Tigger	(40)	296	158	2672562
15	19.6	0.0	0.0	chr3	123026444	123026472	(75269087)	+	G-rich	Low_complexity	1	29	(0)	2673000
432	25.3	13.8	3.0	chr3	123066692	123066858	(75228701)	+	MIRb	SINE/MIR	67	254	(14)	2673093
12	21.6	0.0	0.0	chr3	123311088	123311119	(74984440)	+	A-rich	Low_complexity	1	32	(0)	2673505
391	34.3	5.6	1.0	chr3	123311141	123311343	(74984216)	+	Plat_L3	LINE/CR1	2081	2293	(1293)	2673506
1905	15.1	0.7	0.3	chr3	123397354	123397638	(74897921)	+	AluJr4	SINE/Alu	1	286	(26)	2673635
340	21.2	7.6	0.0	chr3	123413676	123413760	(74881799)	C	L3b	LINE/CR1	(216)	5016	4925	2673662
629	20.5	0.0	0.0	chr3	123464086	123464212	(74831347)	+	L1MC4	LINE/L1	6822	6948	(1094)	2673747
258	29.6	3.5	3.4	chr3	123464418	123464547	(74831012)	+	MIR3	SINE/MIR	23	149	(59)	2673748
227	23.3	3.2	0.0	chr3	123464566	123464625	(74830934)	+	Charlie15b	DNA/hAT-Charlie	6	67	(994)	2673749
2306	20.5	8.4	5.9	chr3	123571235	123571840	(74723719)	+	MLT1E3	LTR/ERVL-MaLR	2	623	(1)	2673935
16	14.6	0.0	6.8	chr3	123961449	123961492	(74334067)	+	G-rich	Low_complexity	1	44	(0)	2674568
13	13.1	0.0	0.0	chr3	124584966	124585000	(73710559)	+	(GAGG)n	Simple_repeat	1	35	(0)	2675536
63	18.9	0.0	5.6	chr3	124834536	124834696	(73460863)	+	GA-rich	Low_complexity	1	161	(0)	2675939
15	18.4	2.7	0.0	chr3	124834679	124834715	(73460844)	+	(AAGC)n	Simple_repeat	1	38	(0)	2675940
245	20.7	15.7	4.0	chr3	124834752	124834858	(73460701)	C	L2b	LINE/L2	(347)	3079	2957	2675941
262	30.0	4.8	3.9	chr3	125142545	125142648	(73152911)	+	MIRc	SINE/MIR	20	124	(144)	2676505
195	34.6	2.9	0.0	chr3	125142660	125142760	(73152799)	C	MER5A	DNA/hAT-Charlie	(83)	106	3	2676506
343	29.1	3.1	5.2	chr3	125162231	125162364	(73133195)	C	L2b	LINE/L2	(0)	3375	3245	2676546
1489	12.1	2.3	0.0	chr3	126170493	126170707	(72124852)	+	HERVFH19-int	LTR/ERV1	7499	7718	(1)	2678210
3919	11.0	1.6	2.1	chr3	126170709	126171016	(72124543)	+	LTR19B	LTR/ERV1	1	298	(282)	2678210
2380	7.8	0.3	0.0	chr3	126171017	126171312	(72124247)	+	AluSc8	SINE/Alu	1	297	(14)	2678211
276	25.8	13.9	0.0	chr3	126288157	126288280	(72007279)	+	MER113A	DNA/hAT-Charlie	98	241	(73)	2678362
12	20.6	8.0	0.0	chr3	126316588	126316637	(71978922)	+	G-rich	Low_complexity	1	54	(0)	2678404
28	0.0	0.0	0.0	chr3	126343153	126343179	(71952380)	+	(C)n	Simple_repeat	1	27	(0)	2678432
13	25.5	5.5	2.6	chr3	126356555	126356627	(71938932)	+	(GCGTGT)n	Simple_repeat	1	77	(0)	2678457
1493	21.1	10.0	4.4	chr3	126420310	126420760	(71874799)	C	MER74A	LTR/ERVL	(60)	498	20	2678562
857	23.9	14.2	0.3	chr3	126420777	126420994	(71874565)	C	L1M5	LINE/L1	(703)	5459	5201	2678563
258	36.3	3.5	9.5	chr3	126703553	126703890	(71591669)	+	L2b	LINE/L2	3058	3374	(1)	2678968
12	7.5	6.7	3.1	chr3	127002441	127002470	(71293089)	+	(GCCCT)n	Simple_repeat	1	32	(0)	2679383
420	27.6	8.2	0.0	chr3	127158725	127158927	(71136632)	C	L2b	LINE/L2	(196)	3179	2959	2679605
266	29.0	5.2	3.3	chr3	127159045	127159194	(71136365)	+	MIR	SINE/MIR	23	175	(87)	2679606
2261	12.0	1.0	0.0	chr3	127367343	127367643	(70927916)	+	AluSx	SINE/Alu	1	304	(8)	2679914
1035	22.5	4.1	4.7	chr3	127367656	127367953	(70927606)	+	L1ME1	LINE/L1	5863	6158	(21)	2679915
287	33.1	3.0	1.2	chr3	127405212	127405373	(70890186)	+	MamRep38	DNA/hAT	108	272	(23)	2679978
322	27.5	5.7	6.9	chr3	127628620	127628779	(70666780)	C	MIR3	SINE/MIR	(45)	163	6	2680396
312	36.2	7.9	7.6	chr3	127693537	127693865	(70601694)	+	L2a	LINE/L2	3097	3426	(0)	2680512
452	11.3	11.0	1.0	chr3	127914920	127915017	(70380542)	C	MER53	DNA/hAT	(84)	109	1	2680908
22999	13.7	1.7	2.0	chr3	128131814	128134180	(70161379)	+	L1MA3	LINE/L1	9	2409	(5156)	2681250
886	29.3	14.4	3.0	chr3	128335148	128336032	(69959527)	C	L2a	LINE/L2	(23)	3403	2379	2681582
184	33.0	3.2	3.2	chr3	128433477	128433570	(69861989)	+	MIR3	SINE/MIR	52	145	(63)	2681720
1815	26.2	4.8	3.7	chr3	128552500	128552739	(69742820)	+	LTR67B	LTR/ERVL	359	602	(18)	2681910
247	35.2	3.8	10.3	chr3	128553099	128553289	(69742270)	C	L2b	LINE/L2	(81)	3294	3104	2681912
227	30.8	13.9	4.9	chr3	128784188	128784494	(69511065)	+	L2	LINE/L2	2433	2771	(648)	2682461
194	23.9	4.2	0.0	chr3	128993480	128993525	(69302034)	+	L2b	LINE/L2	3328	3375	(0)	2682835
18	8.0	4.4	6.4	chr3	129002150	129002194	(69293365)	+	(CCG)n	Simple_repeat	1	47	(0)	2682849
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
2240	15.2	4.7	0.0	chr3	129318312	129318719	(68976840)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2683540
2157	8.6	1.3	3.2	chr3	129328943	129329257	(68966302)	C	AluY	SINE/Alu	(2)	309	1	2683552
497	24.2	9.2	4.0	chr3	131811757	131811958	(66483601)	C	MIRb	SINE/MIR	(7)	255	44	2687479
11	27.7	0.0	0.0	chr3	132660552	132660590	(65634969)	+	(GGAGCG)n	Simple_repeat	1	39	(0)	2688747
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
19	19.7	0.0	0.0	chr3	134937913	134937948	(63357611)	+	(T)n	Simple_repeat	1	36	(0)	2692176
26	0.0	0.0	0.0	chr3	136333034	136333058	(61962501)	+	(T)n	Simple_repeat	1	25	(0)	2694186
952	18.6	3.4	1.1	chr3	137148749	137148922	(61146637)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	2695707
13	12.7	0.0	0.0	chr3	137149024	137149049	(61146510)	+	(TTGTC)n	Simple_repeat	1	26	(0)	2695708
1031	29.3	17.7	5.2	chr3	137149090	137149648	(61145911)	+	L2a	LINE/L2	2469	3155	(271)	2695709
315	35.2	5.3	2.2	chr3	137612310	137612492	(60683067)	C	MIR3	SINE/MIR	(14)	194	6	2696313
16	3.7	7.1	0.0	chr3	137771178	137771205	(60524354)	+	(AGGG)n	Simple_repeat	1	30	(0)	2696492
277	34.5	10.9	1.5	chr3	137970909	137971108	(60324451)	C	MIRb	SINE/MIR	(38)	230	10	2696757
266	13.8	3.3	3.3	chr3	137971444	137971503	(60324056)	+	MER5B	DNA/hAT-Charlie	11	70	(108)	2696758
383	23.9	10.7	7.4	chr3	138009545	138009734	(60285825)	+	MIRc	SINE/MIR	21	217	(51)	2696816
543	22.0	1.7	0.0	chr3	138408752	138408869	(59886690)	+	MER5A1	DNA/hAT-Charlie	33	152	(14)	2697485
18	17.6	6.7	0.0	chr3	138834892	138834936	(59460623)	+	(GC)n	Simple_repeat	1	48	(0)	2698265
24	12.6	0.0	0.0	chr3	138939917	138939952	(59355607)	+	(A)n	Simple_repeat	1	36	(0)	2698562
14	20.0	0.0	6.5	chr3	138945502	138945547	(59350012)	+	(GGC)n	Simple_repeat	1	46	(0)	2698569
39	23.6	4.6	4.4	chr3	138945713	138945726	(59349833)	+	(GGC)n	Simple_repeat	1	18	(163)	2698570
13	15.8	2.7	2.6	chr3	138945727	138945763	(59349796)	+	G-rich	Low_complexity	1	38	(0)	2698571
39	23.6	4.6	4.4	chr3	138945764	138945885	(59349674)	+	(GGC)n	Simple_repeat	19	181	(0)	2698570
18	19.4	0.0	0.0	chr3	138946022	138946062	(59349497)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	2698572
581	27.9	7.3	6.6	chr3	140941197	140941468	(57354091)	C	L1ME3G	LINE/L1	(291)	633	360	2701539
536	29.5	3.9	0.9	chr3	142597620	142597796	(55697763)	C	MIR3	SINE/MIR	(32)	176	2	2704385
451	31.1	7.1	1.9	chr3	142597932	142598144	(55697415)	+	L2c	LINE/L2	2981	3205	(182)	2704386
318	27.6	5.4	3.9	chr3	142952508	142952635	(55342924)	C	MLT1K	LTR/ERVL-MaLR	(7)	588	459	2704975
23032	11.4	1.7	0.4	chr3	146408412	146411603	(51883956)	C	HERVS71-int	LTR/ERV1	(5742)	3236	4	2709542
12	6.9	5.9	5.6	chr3	146544852	146544885	(51750674)	+	(GGAACT)n	Simple_repeat	1	36	(0)	2709708
4831	11.2	5.2	2.8	chr3	149239263	149239702	(49055857)	C	MER4D1	LTR/ERV1	(449)	451	1	2713267
3572	17.9	2.8	2.9	chr3	149239703	149240417	(49055142)	+	MER21B	LTR/ERVL	147	860	(8)	2713269
971	23.0	19.3	2.7	chr3	150825851	150826213	(47469346)	C	HERVL18-int	LTR/ERVL	(4237)	1810	1388	2715918
269	19.1	0.0	0.0	chr3	150826201	150826247	(47469312)	C	HERVL18-int	LTR/ERVL	(5085)	962	916	2715918
931	23.3	1.1	0.0	chr3	150826242	150826413	(47469146)	C	HERVL18-int	LTR/ERVL	(5381)	666	493	2715918
16	0.0	0.0	0.0	chr3	151086481	151086497	(47209062)	+	(T)n	Simple_repeat	1	17	(0)	2716326
250	36.6	3.0	2.2	chr3	151146101	151146234	(47149325)	+	MER5A	DNA/hAT-Charlie	55	189	(0)	2716437
1343	25.8	10.3	3.1	chr3	151296307	151296730	(46998829)	+	LTR16B2	LTR/ERVL	1	458	(4)	2716628
206	33.9	0.0	7.1	chr3	151307615	151307684	(46987875)	+	L2c	LINE/L2	3282	3346	(41)	2716646
321	33.4	5.7	0.2	chr3	151307683	151307826	(46987733)	C	MIRc	SINE/MIR	(114)	154	1	2716647
573	29.7	7.9	0.9	chr3	151307889	151308112	(46987447)	+	MIRc	SINE/MIR	16	256	(12)	2716648
10742	11.4	3.7	0.2	chr3	152079310	152080882	(46214677)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2717687
2119	14.0	4.2	0.5	chr3	152080883	152081249	(46214310)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2717687
12	19.4	4.7	2.2	chr3	152268641	152268683	(46026876)	+	(CGGCTC)n	Simple_repeat	1	45	(0)	2717973
235	24.0	12.6	8.8	chr3	153146632	153146768	(45148791)	+	Tigger10	DNA/TcMar-Tigger	74	216	(1628)	2719321
910	27.6	2.6	5.4	chr3	153146794	153147073	(45148486)	C	MLT1F	LTR/ERVL-MaLR	(276)	272	1	2719322
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
7483	18.3	0.7	2.1	chr3	154683443	154685272	(43610287)	C	L1PBa1	LINE/L1	(4810)	2053	258	2721499
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
23043	17.3	4.8	5.7	chr3	156831935	156835785	(41459774)	C	HERV35I-int	LTR/ERV1	(2)	6261	2829	2724621
30	3.1	0.0	0.0	chr3	156835786	156835818	(41459741)	+	(TTCC)n	Simple_repeat	1	33	(0)	2724623
230	33.0	3.7	0.0	chr3	157105308	157105410	(41190149)	C	MIR3	SINE/MIR	(87)	121	15	2724984
15	0.0	0.0	0.0	chr3	157438021	157438037	(40857522)	+	(GC)n	Simple_repeat	1	17	(0)	2725504
41	0.0	0.0	0.0	chr3	157438038	157438072	(40857487)	+	(CA)n	Simple_repeat	1	35	(0)	2725505
747	25.9	5.5	2.0	chr3	157841035	157841282	(40454277)	C	MIR	SINE/MIR	(2)	260	4	2726019
12	19.8	2.3	4.4	chr3	158732338	158732381	(39563178)	+	G-rich	Low_complexity	1	45	(0)	2727205
286	26.4	4.3	4.3	chr3	159804977	159805091	(38490468)	C	MLT1L	LTR/ERVL-MaLR	(328)	282	168	2728773
195	31.8	9.8	3.9	chr3	159805488	159805641	(38489918)	+	L2c	LINE/L2	3145	3308	(79)	2728774
15	14.0	8.2	1.9	chr3	160450586	160450634	(37844925)	+	(TCCAACT)n	Simple_repeat	1	53	(0)	2729797
414	17.9	7.0	1.9	chr3	161220869	161220976	(37074583)	C	L2a	LINE/L2	(1)	3425	3312	2731017
363	33.3	15.4	4.5	chr3	164845467	164845982	(33449577)	+	HAL1ME	LINE/L1	90	672	(1793)	2735445
10457	12.4	1.5	1.1	chr3	166090496	166092116	(32203443)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	3	2737073
526	13.5	0.4	1.6	chr3	166092119	166092212	(32203347)	C	THE1D	LTR/ERVL-MaLR	(0)	396	300	2737073
2154	13.5	0.3	0.3	chr3	167464010	167464313	(30831246)	C	AluSx1	SINE/Alu	(8)	304	1	2738735
428	33.6	6.0	1.1	chr3	168595698	168595906	(29699653)	C	MIRb	SINE/MIR	(8)	260	18	2740281
2225	15.8	3.2	3.1	chr3	168963469	168964017	(29331542)	C	MLT2A2	LTR/ERVL	(0)	554	1	2740758
255	25.4	2.7	0.0	chr3	169390125	169390195	(28905364)	+	MIR3	SINE/MIR	112	184	(24)	2741267
814	27.2	13.9	3.8	chr3	170057626	170058132	(28237427)	+	L1MEi	LINE/L1	333	899	(1313)	2742288
19	20.3	0.0	0.0	chr3	173396011	173396046	(24899513)	+	(GT)n	Simple_repeat	1	36	(0)	2747507
18	0.0	0.0	0.0	chr3	173396061	173396083	(24899476)	+	(GGC)n	Simple_repeat	1	23	(0)	2747508
199	25.2	14.7	2.0	chr3	176177708	176177808	(22117751)	C	MIRc	SINE/MIR	(76)	192	77	2751336
1902	22.0	13.1	5.1	chr3	176505793	176506382	(21789177)	C	LTR9B	LTR/ERV1	(0)	644	1	2751774
14	12.7	0.0	0.0	chr3	178493074	178493099	(19802460)	+	(TTG)n	Simple_repeat	1	26	(0)	2754770
13	14.3	3.0	2.9	chr3	179071715	179071747	(19223812)	+	(CCG)n	Simple_repeat	1	34	(0)	2755562
14	20.6	2.6	0.0	chr3	179451212	179451250	(18844309)	+	(CCCGC)n	Simple_repeat	1	40	(0)	2756238
2089	16.4	4.1	4.0	chr3	180786284	180786777	(17508782)	+	MLT2A2	LTR/ERVL	1	500	(54)	2758316
192	32.5	7.5	1.1	chr3	181609385	181609471	(16686088)	C	MamRTE1	LINE/RTE-BovB	(1722)	2090	1998	2759596
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
258	17.0	7.0	1.9	chr3	183905158	183905211	(14390348)	+	L2b	LINE/L2	3319	3375	(0)	2763631
286	30.1	8.1	0.0	chr3	183905229	183905341	(14390218)	C	MIRc	SINE/MIR	(140)	128	6	2763632
193	33.1	4.4	4.4	chr3	184133940	184134075	(14161484)	C	L3b	LINE/CR1	(242)	4990	4855	2764087
22	32.0	1.0	2.0	chr3	184155299	184155395	(14140164)	+	G-rich	Low_complexity	1	98	(0)	2764120
18	10.0	0.0	2.9	chr3	184155440	184155473	(14140086)	+	(GCG)n	Simple_repeat	1	34	(0)	2764121
13	18.3	8.5	3.1	chr3	184155511	184155569	(14139990)	+	(CGC)n	Simple_repeat	1	64	(0)	2764122
17	21.6	5.3	3.8	chr3	184155542	184155616	(14139943)	+	(CGCCG)n	Simple_repeat	1	79	(0)	2764123
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
12	14.9	6.0	5.7	chr3	184569120	184569169	(13726390)	+	G-rich	Low_complexity	1	53	(0)	2764921
381	24.7	2.8	3.5	chr3	184604825	184604954	(13690605)	+	MIRb	SINE/MIR	64	195	(13)	2764973
2416	8.4	0.3	0.0	chr3	184660449	184660745	(13634814)	+	AluSp	SINE/Alu	1	298	(15)	2765079
12	8.8	4.2	0.0	chr3	185152947	185152970	(13142589)	+	(GCG)n	Simple_repeat	1	25	(0)	2765862
22	22.5	6.0	0.0	chr3	185153040	185153106	(13142453)	+	(GC)n	Simple_repeat	1	71	(0)	2765863
2454	9.3	0.0	0.0	chr3	185540436	185540745	(12754814)	+	AluSx	SINE/Alu	1	310	(2)	2766593
331	29.5	0.0	1.9	chr3	185541006	185541112	(12754447)	C	HAL1b	LINE/L1	(474)	1947	1843	2766594
538	26.1	3.8	1.1	chr3	185734792	185734969	(12560590)	+	MIR	SINE/MIR	1	183	(79)	2766984
370	27.2	7.0	6.3	chr3	186654128	186654366	(11641193)	C	LTR33A_	LTR/ERVL	(274)	257	17	2768722
3285	15.2	2.1	17.7	chr3	186772294	186772446	(11523113)	C	L1MD1	LINE/L1	(1051)	5308	5159	2768954
14	34.3	0.0	3.8	chr3	186772612	186772690	(11522869)	+	GA-rich	Low_complexity	1	79	(0)	2768961
203	35.7	8.1	0.6	chr3	187185842	187186024	(11109535)	C	L2a	LINE/L2	(316)	3110	2913	2769709
338	33.3	4.2	0.7	chr3	187251848	187251986	(11043573)	+	MIR3	SINE/MIR	23	166	(42)	2769826
207	34.6	8.2	0.0	chr3	187251985	187252062	(11043497)	C	L3	LINE/CR1	(7)	4092	4008	2769827
676	34.1	9.3	7.8	chr3	187591051	187591725	(10703834)	C	HAL1	LINE/L1	(1713)	794	109	2770378
223	25.0	0.0	0.0	chr3	188157617	188157668	(10137891)	C	L2c	LINE/L2	(49)	3338	3287	2771377
286	31.8	1.6	5.3	chr3	188157779	188157911	(10137648)	C	L2c	LINE/L2	(228)	3159	3032	2771377
768	20.6	7.3	0.0	chr3	189167508	189167672	(9127887)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	2773104
16644	13.3	4.0	0.6	chr3	190238406	190241607	(8053952)	+	L1PB1	LINE/L1	15	5114	(1748)	2774808
3936	18.7	0.3	0.0	chr3	190466171	190466801	(7828758)	+	L1PA13	LINE/L1	10	642	(6143)	2775152
423	34.4	3.2	1.6	chr3	190499089	190499271	(7796288)	C	MIR	SINE/MIR	(31)	231	46	2775196
24	3.4	0.0	3.1	chr3	190499380	190499411	(7796148)	+	(CT)n	Simple_repeat	1	32	(0)	2775197
513	33.0	1.6	0.0	chr3	190514250	190514431	(7781128)	C	MIR3	SINE/MIR	(1)	207	23	2775223
17	13.1	0.0	8.2	chr3	192727616	192727664	(5567895)	+	(CCCCCT)n	Simple_repeat	1	49	(0)	2778370
415	26.4	4.0	2.4	chr3	192747276	192747399	(5548160)	C	MIRc	SINE/MIR	(136)	132	7	2778399
421	23.1	11.4	6.1	chr3	193114077	193114307	(5181252)	+	LTR37A	LTR/ERV1	1	245	(181)	2779009
3277	18.7	4.7	5.7	chr3	193114308	193114685	(5180874)	+	MER92-int	LTR/ERV1	4421	4785	(433)	2779006
3577	13.1	1.7	0.5	chr3	193114686	193115270	(5180289)	C	LTR49	LTR/ERV1	(3)	592	1	2779010
465	26.1	6.2	3.2	chr3	193819545	193819730	(4475829)	C	L2	LINE/L2	(572)	2847	2656	2780057
286	32.0	9.8	3.0	chr3	193828455	193828654	(4466905)	+	MIRc	SINE/MIR	2	216	(52)	2780068
215	34.7	7.5	2.4	chr3	194054540	194054793	(4240766)	C	L2b	LINE/L2	(94)	3281	3014	2780447
20	14.6	0.0	0.0	chr3	194058251	194058288	(4237271)	+	(CCAGCC)n	Simple_repeat	1	38	(0)	2780457
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
256	31.8	5.2	6.0	chr3	194098471	194098587	(4196972)	+	L2b	LINE/L2	3242	3357	(18)	2780531
17	20.1	1.7	5.1	chr3	194098605	194098662	(4196897)	+	GA-rich	Low_complexity	1	59	(0)	2780532
329	33.7	7.1	1.5	chr3	194133009	194133207	(4162352)	+	L2c	LINE/L2	2727	2937	(482)	2780599
340	26.6	2.1	1.2	chr3	194351937	194352970	(3942589)	+	(GT)n	Simple_repeat	1	1056	(0)	2780988
343	28.4	9.6	0.7	chr3	194750431	194750572	(3544987)	C	MIR3	SINE/MIR	(52)	156	1	2781784
360	21.6	9.0	0.0	chr3	194750788	194750898	(3544661)	+	L1ME4c	LINE/L1	333	454	(376)	2781785
188	25.0	2.6	0.0	chr3	195212141	195212216	(3083343)	C	L2a	LINE/L2	(303)	3123	3046	2782548
14	20.2	0.0	0.0	chr3	195212273	195212306	(3083253)	+	(GGATC)n	Simple_repeat	1	34	(0)	2782549
221	28.8	19.2	6.8	chr3	195212392	195212480	(3083079)	C	L3	LINE/CR1	(252)	3847	3755	2782550
324	25.9	1.7	0.9	chr3	195238533	195238649	(3056910)	+	MIRc	SINE/MIR	63	181	(27)	2782579
13	13.1	5.6	9.3	chr3	195270948	195271018	(3024541)	+	(GGCCAGC)n	Simple_repeat	1	75	(0)	2782627
425	18.6	11.9	0.7	chr3	195543917	195544057	(2751502)	+	MLT1C	LTR/ERVL-MaLR	303	461	(6)	2783237
939	34.9	15.2	2.6	chr3	195697494	195698924	(2596635)	+	L2	LINE/L2	1394	3041	(378)	2783498
226	26.8	0.9	6.0	chr3	195708307	195708411	(2587148)	+	L3b	LINE/CR1	4039	4089	(10)	2783523
12	28.1	0.0	5.3	chr3	195762296	195762352	(2533207)	+	(CCCCG)n	Simple_repeat	1	57	(0)	2783614
244	25.0	8.0	5.2	chr3	195910030	195910126	(2385433)	+	MIR3	SINE/MIR	82	181	(27)	2783822
215	32.6	14.5	1.4	chr3	195913266	195913408	(2382151)	+	L2a	LINE/L2	3259	3423	(3)	2783830
501	24.3	15.7	0.7	chr3	195913603	195913743	(2381816)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	2783831
186	21.6	0.0	0.0	chr3	195914625	195914661	(2380898)	C	MER5B	DNA/hAT-Charlie	(115)	63	27	2783836
203	38.3	2.7	4.8	chr3	196123160	196123272	(2172287)	+	L2c	LINE/L2	3015	3127	(260)	2784278
1722	20.3	17.4	7.8	chr3	196123273	196123638	(2171921)	+	LTR8	LTR/ERV1	1	444	(247)	2784279
55	17.7	6.8	3.2	chr3	196253869	196254032	(2041527)	+	(AT)n	Simple_repeat	1	171	(0)	2784586
466	27.0	9.2	1.1	chr3	196640108	196640287	(1655272)	+	MIRb	SINE/MIR	2	197	(71)	2785453
266	28.3	5.8	3.4	chr3	196640390	196640506	(1655053)	C	L2a	LINE/L2	(10)	3416	3297	2785454
16	17.7	6.2	4.4	chr3	197520159	197520222	(775337)	+	GA-rich	Low_complexity	1	68	(0)	2787058
209	30.9	1.0	9.3	chr3	197601220	197601326	(694233)	+	L2c	LINE/L2	3269	3366	(21)	2787203
272	29.9	1.2	0.5	chr3	197775375	197775479	(520080)	C	MER8	DNA/TcMar-Tigger	(0)	239	136	2787516
335	22.4	0.2	2.4	chr3	197775483	197775564	(519995)	C	MER8	DNA/TcMar-Tigger	(9)	230	151	2787516
17	15.7	0.0	6.2	chr4	689194	689241	(189525314)	+	G-rich	Low_complexity	1	48	(0)	2789401
634	25.3	21.2	0.6	chr4	782342	782655	(189431900)	+	L2a	LINE/L2	3017	3412	(14)	2789517
2424	5.5	0.3	0.0	chr4	782781	783071	(189431484)	+	AluY	SINE/Alu	2	293	(18)	2789518
16	14.9	2.7	0.0	chr4	1171212	1171255	(189043300)	+	(GCCCCCG)n	Simple_repeat	1	45	(0)	2789955
14	25.5	6.2	0.0	chr4	1346620	1346684	(188867871)	+	(GGCGCGG)n	Simple_repeat	1	69	(0)	2790134
244	18.6	0.0	7.8	chr4	1712911	1712974	(188501581)	+	MLT1F2	LTR/ERVL-MaLR	497	555	(5)	2790522
17	16.2	3.9	3.7	chr4	1856653	1856704	(188357851)	+	(CTGCGCT)n	Simple_repeat	1	54	(0)	2790697
236	23.1	0.3	3.1	chr4	2793977	2794056	(187420499)	+	MIR1_Amn	SINE/MIR	93	171	(97)	2792251
32	0.0	0.0	0.0	chr4	2934282	2934311	(187280244)	+	(GATCCC)n	Simple_repeat	1	30	(0)	2792455
3342	15.1	10.8	3.3	chr4	2935838	2936474	(187278081)	+	LTR8	LTR/ERV1	1	691	(0)	2792458
517	31.6	8.3	6.7	chr4	3291647	3291944	(186922611)	+	LTR33	LTR/ERVL	206	512	(3)	2793022
44	16.9	1.4	7.8	chr4	3292872	3293011	(186921544)	+	(GCCCC)n	Simple_repeat	1	142	(0)	2793025
17	23.3	0.0	2.4	chr4	3765559	3765613	(186448942)	+	(CG)n	Simple_repeat	1	53	(0)	2793579
187	5.7	2.8	5.4	chr4	3767870	3767906	(186446649)	+	MamRTE1	LINE/RTE-BovB	2284	2319	(1493)	2793582
12	20.7	0.0	2.9	chr4	3768107	3768141	(186446414)	+	(GCAGG)n	Simple_repeat	1	35	(0)	2793583
254	32.8	9.2	1.5	chr4	3835848	3835977	(186378578)	+	MIR	SINE/MIR	13	153	(109)	2793689
281	32.3	1.0	3.9	chr4	3836035	3836137	(186378418)	C	MIR	SINE/MIR	(64)	204	98	2793690
22439	13.4	1.8	0.2	chr4	4033942	4037122	(186177433)	C	HERVS71-int	LTR/ERV1	(5743)	3235	4	2793987
496	30.4	10.1	3.2	chr4	4791163	4791447	(185423108)	C	L2b	LINE/L2	(0)	3375	3069	2795476
329	36.7	0.6	1.7	chr4	4872448	4872627	(185341928)	C	MIRb	SINE/MIR	(21)	247	70	2795626
281	30.0	6.0	0.9	chr4	4989052	4989162	(185225393)	+	MIRb	SINE/MIR	136	252	(16)	2795830
261	31.7	0.0	0.0	chr4	4989361	4989442	(185225113)	C	MIRb	SINE/MIR	(65)	203	122	2795831
208	27.7	1.5	1.5	chr4	5708817	5708882	(184505673)	+	L2b	LINE/L2	3095	3160	(227)	2797031
12	22.9	2.3	2.3	chr4	5890679	5890721	(184323834)	+	GA-rich	Low_complexity	1	44	(0)	2797366
208	32.2	0.0	0.0	chr4	5890882	5890967	(184323588)	C	MIR1_Amn	SINE/MIR	(83)	185	100	2797367
1141	25.0	15.7	0.9	chr4	6013482	6013909	(184200646)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	2797603
212	26.5	0.0	0.0	chr4	6105348	6105396	(184109159)	+	L2a	LINE/L2	3352	3400	(26)	2797748
1900	16.9	6.2	0.3	chr4	6110106	6110466	(184104089)	+	MLT1B	LTR/ERVL-MaLR	7	390	(0)	2797756
634	29.7	8.8	0.0	chr4	6222862	6223100	(183991455)	C	MIR	SINE/MIR	(0)	262	1	2797981
1419	15.7	0.9	0.5	chr4	6223225	6223447	(183991108)	+	AluJr	SINE/Alu	86	309	(3)	2797982
18	20.2	1.6	4.8	chr4	6575106	6575167	(183639388)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	2798642
454	31.4	8.9	0.5	chr4	6608528	6608713	(183605842)	+	MIRc	SINE/MIR	20	222	(46)	2798721
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
12	20.8	3.1	7.6	chr4	6716367	6716430	(183498125)	+	(CGC)n	Simple_repeat	1	66	(0)	2798931
1960	22.1	3.7	8.6	chr4	7414453	7415100	(182799455)	C	LTR6A	LTR/ERV1	(0)	564	1	2800115
1762	24.1	5.2	4.5	chr4	7415171	7415664	(182798891)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	1	2800116
278	32.8	3.3	0.6	chr4	7462597	7462725	(182751830)	+	L2b	LINE/L2	3253	3385	(2)	2800177
21	20.0	2.9	4.2	chr4	8350710	8350778	(181863777)	+	(ATTC)n	Simple_repeat	1	71	(0)	2801648
184	25.3	8.4	1.1	chr4	8350813	8350900	(181863655)	C	L2b	LINE/L2	(36)	3339	3245	2801649
12	32.3	2.6	2.6	chr4	8894150	8894225	(181320330)	+	(CCCGG)n	Simple_repeat	1	78	(0)	2802430
21898	13.9	2.1	0.6	chr4	9600389	9603574	(180610981)	+	HERVS71-int	LTR/ERV1	4	3236	(5742)	2803282
244	22.9	7.9	0.0	chr4	10812219	10812288	(179402267)	+	L1MA9	LINE/L1	6221	6296	(16)	2805146
777	28.1	4.1	3.7	chr4	10812625	10812868	(179401687)	+	MIR	SINE/MIR	6	250	(12)	2805147
246	30.6	19.0	0.5	chr4	13531008	13531191	(176683364)	+	MIR	SINE/MIR	32	257	(5)	2809449
2142	10.5	0.0	4.1	chr4	13532885	13533199	(176681356)	C	AluSc	SINE/Alu	(4)	305	4	2809452
249	16.5	1.9	18.2	chr4	13540133	13540258	(176674297)	+	MIRc	SINE/MIR	133	237	(31)	2809464
244	30.7	6.8	3.1	chr4	15489653	15489877	(174724678)	+	L2-3_Crp	LINE/L2	726	959	(1137)	2812745
816	23.9	9.6	0.4	chr4	15489878	15490133	(174724422)	+	L2a	LINE/L2	2163	2444	(975)	2812746
12	21.4	4.4	2.1	chr4	16226806	16226850	(173987705)	+	(CGG)n	Simple_repeat	1	47	(0)	2813970
39	15.1	0.0	1.3	chr4	16731185	16731259	(173483296)	+	(GAATG)n	Simple_repeat	1	75	(0)	2814833
1041	22.3	5.3	12.2	chr4	16731321	16731723	(173482832)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	2814834
24	21.9	0.0	0.0	chr4	17206740	17206788	(173007767)	+	(AC)n	Simple_repeat	1	49	(0)	2815740
614	23.5	6.7	1.0	chr4	17207006	17207203	(173007352)	+	Helitron1Na_Mam	RC/Helitron	7	216	(846)	2815741
460	26.7	11.6	4.8	chr4	17371638	17371932	(172842623)	+	L2c	LINE/L2	3069	3386	(1)	2816068
254	23.8	17.6	0.0	chr4	17614908	17614991	(172599564)	C	MIRb	SINE/MIR	(118)	150	49	2816583
25	10.7	0.0	0.0	chr4	20251997	20252036	(169962519)	+	(GGC)n	Simple_repeat	1	40	(0)	2820693
702	27.0	3.9	0.0	chr4	22372986	22373181	(167841374)	+	MLT1J1	LTR/ERVL-MaLR	1	204	(240)	2823884
58	1.9	0.0	0.0	chr4	24470272	24470325	(165744230)	+	(AC)n	Simple_repeat	1	54	(0)	2827178
780	19.3	10.6	2.6	chr4	24507529	24507762	(165706793)	C	LTR16C	LTR/ERVL	(2)	487	233	2827253
571	29.8	13.5	1.3	chr4	24659711	24660009	(165554546)	+	MLT1H	LTR/ERVL-MaLR	1	341	(208)	2827497
275	28.6	3.7	0.3	chr4	24661983	24662103	(165552452)	+	L2c	LINE/L2	3239	3366	(9)	2827502
20	13.7	0.0	0.0	chr4	24662247	24662278	(165552277)	+	(C)n	Simple_repeat	1	32	(0)	2827503
4289	14.6	2.1	2.8	chr4	24848607	24849009	(165365546)	+	MER44C	DNA/TcMar-Tigger	323	732	(1)	2827847
697	28.8	14.7	4.4	chr4	25950424	25950855	(164263700)	C	LTR33	LTR/ERVL	(29)	486	3	2830070
403	41.5	3.5	1.9	chr4	31533471	31533946	(158680609)	C	L1MA4	LINE/L1	(5797)	484	1	2838232
10453	7.1	4.8	5.2	chr4	31996207	31997789	(158216766)	+	LTR12C	LTR/ERV1	3	1579	(0)	2838855
1057	32.1	7.5	1.2	chr4	32000965	32001475	(158213080)	+	MLT1H1	LTR/ERVL-MaLR	10	555	(0)	2838861
1511	30.1	7.9	4.2	chr4	32002443	32003087	(158211468)	C	MLT1J-int	LTR/ERVL-MaLR	(220)	1167	497	2838864
704	33.4	16.1	1.6	chr4	37322137	37322879	(152891676)	C	L2a	LINE/L2	(1)	3425	2550	2845955
18	8.1	7.7	0.0	chr4	37890133	37890171	(152324384)	+	(GTGTGC)n	Simple_repeat	1	42	(0)	2846889
572	18.9	7.7	0.0	chr4	38060747	38060878	(152153677)	C	MER5A1	DNA/hAT-Charlie	(0)	166	24	2847152
12	25.3	3.8	1.8	chr4	38664311	38664363	(151550192)	+	(CGCC)n	Simple_repeat	1	55	(0)	2848198
14	13.6	0.0	5.6	chr4	39698529	39698564	(150515991)	+	(TCCCC)n	Simple_repeat	1	36	(0)	2850245
12	19.9	0.0	0.0	chr4	40056774	40056802	(150157753)	+	(CCCG)n	Simple_repeat	1	29	(0)	2851169
225	27.0	3.1	1.6	chr4	40395769	40395832	(149818723)	C	MLT1N2	LTR/ERVL-MaLR	(479)	83	19	2851923
2268	10.5	0.0	0.0	chr4	40632462	40632757	(149581798)	+	AluSx1	SINE/Alu	2	297	(15)	2852470
20	25.4	1.6	1.6	chr4	41216400	41216413	(148998142)	+	(GCG)n	Simple_repeat	1	31	(33)	2853654
25	11.8	0.0	0.0	chr4	41216414	41216450	(148998105)	+	(G)n	Simple_repeat	1	37	(0)	2853655
36	12.4	1.3	3.9	chr4	41880959	41881034	(148333521)	+	(TTCCC)n	Simple_repeat	1	77	(0)	2854762
266	26.4	4.2	2.1	chr4	46839560	46839652	(143374903)	+	MamTip2	DNA/hAT-Tip100	103	197	(108)	2861357
12	12.0	7.9	2.4	chr4	47914150	47914187	(142300368)	+	(CCGGCCA)n	Simple_repeat	1	41	(0)	2862968
239	30.9	8.0	2.0	chr4	48175607	48175737	(142038818)	+	MIRb	SINE/MIR	67	206	(62)	2863408
2274	13.1	2.4	3.9	chr4	48177666	48178046	(142036509)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2863415
22	31.4	3.0	2.9	chr4	48269850	48269981	(141944574)	+	(CGCCC)n	Simple_repeat	1	136	(0)	2863590
34	29.4	1.6	5.4	chr4	48483646	48483828	(141730727)	+	(GGCCCC)n	Simple_repeat	1	186	(0)	2863934
15	21.3	0.0	4.3	chr4	52751463	52751509	(137463046)	+	G-rich	Low_complexity	1	47	(0)	2866701
12	22.4	0.0	2.6	chr4	52751641	52751678	(137462877)	+	G-rich	Low_complexity	1	38	(0)	2866702
415	26.0	19.3	0.0	chr4	52870838	52871033	(137343522)	C	MIR	SINE/MIR	(19)	243	1	2866905
25	35.7	0.0	0.9	chr4	54100719	54100780	(136113775)	+	(GCA)n	Simple_repeat	1	111	(0)	2868726
905	35.4	13.3	1.2	chr4	55973102	55974008	(134240547)	+	L2	LINE/L2	1170	2203	(1216)	2871783
473	31.2	4.8	6.0	chr4	56605234	56605511	(133609044)	C	L2b	LINE/L2	(0)	3426	3122	2872919
1868	20.9	4.2	8.7	chr4	56605520	56606166	(133608389)	+	LTR6A	LTR/ERV1	1	564	(0)	2872920
261	34.0	5.9	2.7	chr4	56818829	56818984	(133395571)	C	L2c	LINE/L2	(6)	3381	3201	2873364
500	25.2	19.9	1.9	chr4	56818972	56819181	(133395374)	+	MIR	SINE/MIR	5	261	(1)	2873365
822	16.4	1.5	0.0	chr4	56820642	56820769	(133393786)	C	FLAM_C	SINE/Alu	(12)	131	2	2873369
12	10.9	0.0	8.6	chr4	56821734	56821768	(133392787)	+	G-rich	Low_complexity	1	35	(0)	2873371
258	36.8	0.0	0.0	chr4	57555172	57555258	(132659297)	+	MIRb	SINE/MIR	26	112	(156)	2874655
2201	10.0	0.3	1.0	chr4	57555260	57555549	(132659006)	C	AluSg	SINE/Alu	(22)	288	1	2874656
49	25.2	3.5	0.0	chr4	61199939	61200082	(129014473)	+	GA-rich	Low_complexity	1	149	(0)	2879115
2556	25.2	7.2	8.4	chr4	64935423	64936298	(125278257)	C	MLT1A0-int	LTR/ERVL-MaLR	(636)	1099	236	2883761
829	15.3	0.0	5.7	chr4	65675402	65675558	(124538997)	C	AluJo	SINE/Alu	(7)	305	158	2884666
2533	24.1	2.4	4.7	chr4	69467650	69468189	(120746366)	C	LTR9B	LTR/ERV1	(0)	644	93	2889430
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
13	9.3	5.3	5.0	chr4	71186674	71186711	(119027844)	+	G-rich	Low_complexity	1	40	(0)	2891895
310	33.0	0.0	1.8	chr4	71784837	71784950	(118429605)	C	MIR3	SINE/MIR	(12)	196	85	2892659
499	33.5	2.9	0.0	chr4	71785053	71785255	(118429300)	+	MIR	SINE/MIR	54	262	(0)	2892660
20241	15.5	4.3	0.9	chr4	73169504	73171178	(117043377)	+	L1MA2	LINE/L1	13	1761	(5804)	2894520
547	24.1	0.8	0.0	chr4	73485424	73485539	(116729016)	+	FLAM_A	SINE/Alu	17	133	(9)	2894960
907	20.0	3.8	8.9	chr4	73573762	73574041	(116640514)	+	LTR41B	LTR/ERVL	3	267	(501)	2895075
1491	17.4	10.7	2.4	chr4	73574348	73574682	(116639873)	+	LTR41B	LTR/ERVL	393	758	(0)	2895075
13	25.8	0.0	0.0	chr4	74038534	74038570	(116175985)	+	(CAG)n	Simple_repeat	1	37	(0)	2895644
263	33.5	10.2	6.2	chr4	76306016	76306193	(113908362)	C	MIR3	SINE/MIR	(16)	192	7	2899053
361	28.4	11.4	1.7	chr4	76642173	76642290	(113572265)	+	L2c	LINE/L2	3249	3379	(8)	2899595
2925	21.2	9.4	1.9	chr4	76764453	76765220	(113449335)	C	L1MEf	LINE/L1	(4555)	1645	815	2899804
285	20.5	10.2	7.7	chr4	77178791	77178914	(113035641)	+	MIR3	SINE/MIR	8	130	(78)	2900512
2140	11.0	3.9	0.0	chr4	77178915	77179214	(113035341)	C	AluSx	SINE/Alu	(0)	312	1	2900513
2724	17.2	5.7	1.8	chr4	77385728	77386282	(112828273)	+	MER39	LTR/ERV1	33	610	(97)	2900681
34	7.5	0.0	0.0	chr4	78058104	78058146	(112156409)	+	(GT)n	Simple_repeat	1	43	(0)	2901639
12	15.9	5.7	0.0	chr4	78551707	78551741	(111662814)	+	(GGAGGCA)n	Simple_repeat	1	37	(0)	2902300
12	13.9	0.0	0.0	chr4	80072759	80072782	(110141773)	+	(CCG)n	Simple_repeat	1	24	(0)	2904351
307	31.4	3.3	9.7	chr4	81594709	81594907	(108619648)	C	L2b	LINE/L2	(21)	3354	3192	2906353
1621	21.9	4.1	4.9	chr4	82223725	82224195	(107990360)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2907265
302	30.3	0.9	0.9	chr4	83110465	83110574	(107103981)	+	L2a	LINE/L2	3295	3404	(22)	2908872
645	28.8	8.8	6.0	chr4	84028182	84028702	(106185853)	C	LTR33A_	LTR/ERVL	(2)	529	1	2910578
312	25.2	17.1	0.0	chr4	84028724	84028830	(106185725)	C	MIR	SINE/MIR	(10)	252	124	2910579
450	29.8	3.3	5.5	chr4	84622877	84623185	(105591370)	C	HAL1	LINE/L1	(380)	2127	1826	2911380
2158	8.2	6.0	0.0	chr4	85417887	85418168	(104796387)	C	AluSc	SINE/Alu	(9)	300	1	2912487
349	31.2	15.7	6.0	chr4	86391790	86392156	(103822399)	+	MLT1K	LTR/ERVL-MaLR	16	415	(180)	2913772
2287	10.7	0.7	1.0	chr4	86392157	86392456	(103822099)	+	AluSx	SINE/Alu	1	299	(13)	2913773
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
15	23.7	9.2	2.5	chr4	88007541	88007649	(102206906)	+	(GGCGGACG)n	Simple_repeat	1	119	(0)	2916370
412	33.3	7.0	3.9	chr4	90856599	90856832	(99357723)	+	MIRc	SINE/MIR	3	244	(24)	2920475
317	28.0	1.1	2.1	chr4	90856842	90856936	(99357619)	+	MamRep1879	DNA/hAT-Tip100?	1	94	(122)	2920476
1913	24.5	8.0	3.4	chr4	90857083	90857615	(99356940)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2920477
615	33.0	12.3	9.3	chr4	90892964	90893751	(99320804)	C	L1MEh	LINE/L1	(1413)	822	8	2920524
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
3302	27.6	5.5	5.6	chr4	92255532	92257526	(97957029)	C	L1M2	LINE/L1	(4787)	2062	10	2922047
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
200	32.9	7.2	4.4	chr4	92455485	92455713	(97758842)	C	L2b	LINE/L2	(208)	3167	2932	2922299
1756	32.7	6.5	6.2	chr4	100879402	100881653	(89332902)	+	ERV3-16A3_I-int	LTR/ERVL	1	2381	(3376)	2933617
13	20.7	2.1	4.1	chr4	102827165	102827212	(87387343)	+	(CGCGCC)n	Simple_repeat	1	49	(0)	2936199
358	28.8	12.5	6.2	chr4	108377955	108378365	(81836190)	C	L2a	LINE/L2	(3)	3423	2934	2943386
6040	5.8	5.1	1.7	chr4	109681439	109682191	(80532364)	C	LTR17	LTR/ERV1	(0)	780	1	2945362
18	20.1	0.0	5.3	chr4	109703447	109703455	(80511100)	+	(GGCCCC)n	Simple_repeat	1	27	(30)	2945395
12	18.1	2.4	4.8	chr4	109703456	109703496	(80511059)	+	(GCCCC)n	Simple_repeat	1	42	(0)	2945396
304	29.5	17.9	5.0	chr4	109915174	109915391	(80299164)	+	MIRb	SINE/MIR	3	254	(14)	2945699
11	30.4	0.0	0.0	chr4	110196409	110196452	(80018103)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	2946147
633	31.8	6.3	1.7	chr4	110361667	110361906	(79852649)	C	MIRb	SINE/MIR	(0)	268	17	2946502
15	22.1	0.0	2.3	chr4	110623140	110623183	(79591372)	+	(CTCCGC)n	Simple_repeat	1	44	(0)	2946875
773	28.4	5.9	0.8	chr4	112725917	112726268	(77488287)	C	L2a	LINE/L2	(144)	3282	2912	2949719
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
201	20.7	5.4	12.1	chr4	118834984	118835082	(71379473)	C	OldhAT1	DNA/hAT-Ac	(886)	1962	1871	2957574
21	23.0	2.4	4.7	chr4	119627302	119627391	(70587164)	+	(CCGCG)n	Simple_repeat	1	87	(0)	2958740
6661	18.8	5.8	1.5	chr4	120003749	120005302	(70209253)	+	L1M3f	LINE/L1	1239	2861	(4704)	2959247
192	31.5	1.4	1.4	chr4	120921790	120921863	(69292692)	+	OldhAT1	DNA/hAT-Ac	1623	1696	(1152)	2960398
2101	19.2	4.8	2.8	chr4	122083265	122083757	(68130798)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	2962048
2634	4.2	0.3	2.3	chr4	123392166	123392471	(66822084)	C	AluY	SINE/Alu	(10)	301	2	2963901
19	17.5	0.0	0.0	chr4	123397833	123397865	(66816690)	+	A-rich	Low_complexity	1	33	(0)	2963909
16	0.0	4.3	0.0	chr4	123505553	123505575	(66708980)	+	(TGA)n	Simple_repeat	1	24	(0)	2964102
20	0.0	0.0	0.0	chr4	123505599	123505620	(66708935)	+	(A)n	Simple_repeat	1	22	(0)	2964103
17	25.9	0.0	1.9	chr4	123505639	123505690	(66708865)	+	(CGC)n	Simple_repeat	1	52	(0)	2964104
23	24.2	1.6	0.0	chr4	124712431	124712493	(65502062)	+	(CCG)n	Simple_repeat	1	64	(0)	2965644
376	27.8	10.2	2.2	chr4	128569105	128569284	(61645271)	C	MIRc	SINE/MIR	(62)	206	11	2970910
24	23.1	0.8	4.1	chr4	131050450	131050519	(59164036)	+	GA-rich	Low_complexity	1	67	(0)	2974138
241	34.1	2.3	0.0	chr4	131050630	131050714	(59163841)	+	MLT1M	LTR/ERVL-MaLR	101	187	(485)	2974139
12	16.9	0.0	0.0	chr4	135963135	135963161	(54251394)	+	GA-rich	Low_complexity	1	27	(0)	2979894
707	32.5	5.8	5.8	chr4	138700923	138701304	(51513251)	+	LTR33	LTR/ERVL	134	515	(0)	2983229
3700	10.1	0.4	6.3	chr4	138975072	138975422	(51239133)	+	MER4D	LTR/ERV1	203	536	(367)	2983664
906	11.4	4.8	2.1	chr4	138975401	138975556	(51238999)	+	FLAM_C	SINE/Alu	11	302	(0)	2983667
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
16	5.2	0.0	0.0	chr4	139555180	139555199	(50659356)	+	(A)n	Simple_repeat	1	20	(0)	2984843
1127	11.1	2.3	0.0	chr4	139667051	139667222	(50547333)	C	MER57B2	LTR/ERV1	(0)	403	228	2985078
500	30.1	11.2	6.3	chr4	139918105	139918759	(50295796)	+	L2b	LINE/L2	2705	3375	(0)	2985449
12	7.9	7.4	0.0	chr4	140151677	140151703	(50062852)	+	G-rich	Low_complexity	1	29	(0)	2985798
12	23.4	0.0	4.5	chr4	140151741	140151784	(50062771)	+	A-rich	Low_complexity	1	44	(0)	2985799
355	30.8	8.0	2.3	chr4	140244423	140244598	(49969957)	C	MIR3	SINE/MIR	(9)	199	13	2985956
1944	19.5	3.5	3.3	chr4	141632510	141633065	(48581490)	+	MLT2A2	LTR/ERVL	1	554	(0)	2987939
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
1274	22.9	8.4	6.2	chr4	145500059	145500573	(44713982)	+	L2a	LINE/L2	2622	3165	(261)	2993002
298	24.3	9.0	12.6	chr4	145500574	145500700	(44713855)	+	L2a	LINE/L2	3305	3426	(0)	2993002
18	21.7	2.6	6.2	chr4	145733135	145733212	(44481343)	+	(GCCC)n	Simple_repeat	1	80	(0)	2993328
636	23.9	9.9	1.8	chr4	145824359	145824707	(44389848)	C	LTR33A_	LTR/ERVL	(1)	530	85	2993458
17	28.2	5.5	1.0	chr4	145936942	145937032	(44277523)	+	(CCCTCTC)n	Simple_repeat	1	96	(0)	2993605
15	0.0	4.0	3.9	chr4	146639953	146639977	(43574578)	+	(CCA)n	Simple_repeat	1	26	(0)	2994604
36	2.7	0.0	0.0	chr4	146640089	146640126	(43574429)	+	(CAC)n	Simple_repeat	1	38	(0)	2994605
803	30.1	7.4	3.5	chr4	150374911	150375258	(39839297)	C	LTR33	LTR/ERVL	(0)	515	153	2999669
221	36.0	8.8	4.9	chr4	150375422	150375461	(39839094)	+	L2	LINE/L2	2083	2123	(1296)	2999670
12	19.5	0.0	8.3	chr4	151015367	151015414	(39199141)	+	G-rich	Low_complexity	1	48	(0)	3000636
487	26.9	8.2	0.0	chr4	152225851	152226017	(37988538)	+	MIR3	SINE/MIR	25	206	(2)	3002661
876	17.1	8.8	0.0	chr4	152680340	152680526	(37534029)	+	MER3	DNA/hAT-Charlie	5	209	(0)	3003395
396	31.2	6.5	2.8	chr4	152697591	152697768	(37516787)	C	MIRc	SINE/MIR	(66)	202	18	3003436
1048	10.8	3.7	0.0	chr4	152697786	152697943	(37516612)	C	MER5A	DNA/hAT-Charlie	(25)	164	1	3003437
777	24.3	1.2	0.6	chr4	153021024	153021193	(37193362)	+	Arthur1A	DNA/hAT-Tip100	1	171	(6)	3003898
268	33.7	9.3	2.8	chr4	153542471	153542650	(36671905)	+	MIRb	SINE/MIR	61	253	(15)	3004858
822	29.9	22.9	1.8	chr4	153628943	153629952	(36584603)	+	L2a	LINE/L2	1065	2350	(1069)	3004975
293	31.9	2.1	3.1	chr4	153790119	153790215	(36424340)	C	L2b	LINE/L2	(29)	3346	3251	3005189
13	9.4	0.0	11.6	chr4	159024520	159024562	(31189993)	+	A-rich	Low_complexity	1	43	(0)	3012251
24	9.5	0.0	0.0	chr4	159104555	159104588	(31109967)	+	(TG)n	Simple_repeat	1	34	(0)	3012420
7862	6.3	0.6	0.2	chr4	159315425	159316427	(30898128)	C	LTR13	LTR/ERVK	(0)	1007	1	3012708
440	37.3	9.0	2.4	chr4	162510015	162510467	(27704088)	+	L2b	LINE/L2	2719	3201	(174)	3016830
2328	8.3	0.3	0.3	chr4	163167011	163167299	(27047256)	+	AluSg	SINE/Alu	1	289	(21)	3017677
2462	8.7	0.3	0.0	chr4	163550001	163550310	(26664245)	+	AluSx1	SINE/Alu	1	311	(1)	3018217
16	0.0	0.0	0.0	chr4	163550508	163550524	(26664031)	+	(T)n	Simple_repeat	1	17	(0)	3018218
13	20.2	2.0	5.8	chr4	168832071	168832121	(21382434)	+	(CCCGCT)n	Simple_repeat	1	52	(0)	3025411
326	22.1	19.6	0.0	chr4	169010531	169010616	(21203939)	C	MER81	DNA/hAT-Blackjack	(3)	111	5	3025635
708	31.5	11.7	8.5	chr4	169158037	169158635	(21055920)	C	L2c	LINE/L2	(30)	3357	2742	3025907
15	22.4	4.3	0.0	chr4	169791712	169791758	(20422797)	+	(GGCG)n	Simple_repeat	1	49	(0)	3026840
13	13.2	6.1	0.0	chr4	170026518	170026550	(20188005)	+	G-rich	Low_complexity	1	35	(0)	3027259
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
3774	24.4	14.2	3.0	chr4	173203391	173206457	(17008098)	C	L1M1	LINE/L1	(3931)	3634	470	3031288
21	5.6	5.4	0.0	chr4	174153049	174153085	(16061470)	+	(AAAACA)n	Simple_repeat	1	39	(0)	3032578
272	19.6	0.0	0.0	chr4	177696450	177696505	(12518050)	C	L1MA4A	LINE/L1	(18)	6285	6230	3037309
542	35.6	4.2	4.4	chr4	177696640	177697136	(12517419)	C	L1M3b	LINE/L1	(5785)	496	1	3037310
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
28	10.0	0.0	0.0	chr4	182449187	182449230	(7765325)	+	(GCG)n	Simple_repeat	1	44	(0)	3043420
48	0.0	0.0	0.0	chr4	182846938	182846978	(7367577)	+	(GT)n	Simple_repeat	1	41	(0)	3043971
1986	11.6	3.8	0.0	chr4	182847109	182847409	(7367146)	+	AluSq2	SINE/Alu	1	313	(0)	3043972
985	19.9	5.8	1.0	chr4	182928100	182928317	(7286238)	+	LTR50	LTR/ERVL	1	204	(591)	3044097
477	20.8	16.2	0.8	chr4	182928342	182928573	(7285982)	+	LTR50	LTR/ERVL	496	764	(31)	3044097
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
14	20.1	4.2	2.0	chr4	183798076	183798123	(6416432)	+	(CCCGT)n	Simple_repeat	1	50	(0)	3045635
18	3.5	0.0	6.1	chr4	184103997	184104029	(6110526)	+	(TTTCT)n	Simple_repeat	1	33	(0)	3046051
17	22.4	0.0	0.0	chr4	184390083	184390124	(5824431)	+	(TCTC)n	Simple_repeat	1	42	(0)	3046479
282	32.9	9.3	10.9	chr4	184994822	184995283	(5219272)	C	L2a	LINE/L2	(1036)	2383	1895	3047500
19	16.0	4.2	6.7	chr4	185143506	185143577	(5070978)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3047770
28	0.0	0.0	0.0	chr4	185143606	185143632	(5070923)	+	(CGCC)n	Simple_repeat	1	27	(0)	3047771
1784	19.3	13.8	0.5	chr4	185204549	185204975	(5009580)	+	MLT1D	LTR/ERVL-MaLR	1	493	(12)	3047888
2346	17.9	9.0	2.5	chr4	185206693	185207209	(5007346)	C	MLT2B3	LTR/ERVL	(0)	554	1	3047893
20	16.7	0.0	0.0	chr4	185208988	185209021	(5005534)	+	A-rich	Low_complexity	1	34	(0)	3047898
326	25.0	6.7	0.9	chr4	186081703	186081815	(4132740)	C	L2c	LINE/L2	(196)	3191	3072	3049171
2448	9.1	0.0	0.0	chr4	186081945	186082251	(4132304)	+	AluSg	SINE/Alu	1	307	(3)	3049172
14	15.2	2.0	7.7	chr4	186723601	186723651	(3490904)	+	(CCGCCCG)n	Simple_repeat	1	52	(0)	3050036
14	6.6	0.0	12.2	chr4	188016923	188016963	(2197592)	+	GA-rich	Low_complexity	1	41	(0)	3051813
201	31.2	3.0	0.0	chr4	188032778	188032873	(2181682)	+	MIR3	SINE/MIR	43	141	(67)	3051850
2435	6.5	0.0	0.0	chr4	188032885	188033175	(2181380)	+	AluSx	SINE/Alu	1	291	(21)	3051851
644	17.4	4.3	2.2	chr4	188035633	188035767	(2178788)	C	MER57E1	LTR/ERV1	(2)	370	233	3051859
486	22.6	6.4	0.0	chr4	188035783	188035884	(2178671)	C	MER57E1	LTR/ERV1	(252)	120	12	3051859
626	2.6	0.0	0.0	chr4	188035885	188035961	(2178594)	C	Alu	SINE/Alu	(12)	299	223	3051860
357	27.3	8.5	1.8	chr4	188196041	188196204	(2018351)	C	MIRb	SINE/MIR	(0)	268	93	3052199
2139	16.3	0.7	8.2	chr4	188196591	188197052	(2017503)	+	LTR1	LTR/ERV1	1	427	(356)	3052200
5801	22.2	4.4	1.5	chr4	189000001	189001149	(1213406)	C	L1PA10	LINE/L1	(4443)	3160	1960	3053371
3133	19.9	1.1	0.6	chr4	189001150	189001791	(1212764)	+	LTR9D	LTR/ERV1	1	645	(0)	3053372
260	23.3	8.6	13.9	chr4	189769210	189769418	(445137)	C	MLT1H	LTR/ERVL-MaLR	(32)	517	321	3054240
1213	19.6	3.2	1.6	chr4	189769432	189769737	(444818)	+	Charlie1b	DNA/hAT-Charlie	213	523	(0)	3054241
3920	21.4	2.5	0.2	chr5	350771	351753	(181186506)	+	L1MB5	LINE/L1	5164	6172	(2)	3055357
34	37.4	3.4	2.4	chr5	1782678	1782915	(179755344)	+	(CA)n	Simple_repeat	1	246	(0)	3056645
552	24.1	4.7	0.0	chr5	1800232	1800372	(179737887)	C	L1ME2z	LINE/L1	(3)	6441	6294	3056665
257	34.0	1.0	0.0	chr5	4088030	4088132	(177450127)	+	MIR	SINE/MIR	146	249	(13)	3058987
555	31.0	1.0	1.0	chr5	4906043	4906244	(176632015)	C	MamSINE1	SINE/tRNA-RTE	(2)	288	87	3059920
3144	23.5	21.2	2.3	chr5	8006775	8008987	(173529272)	C	L1M3e	LINE/L1	(4317)	2790	1	3063843
57	23.6	3.2	1.4	chr5	8726945	8727123	(172811136)	+	GA-rich	Low_complexity	1	182	(0)	3064704
1066	23.6	14.4	1.6	chr5	10201180	10201793	(171336466)	C	LTR50	LTR/ERVL	(2)	793	1	3066483
13	19.4	0.0	2.7	chr5	10514140	10514176	(171024083)	+	(CCCTTCC)n	Simple_repeat	1	37	(0)	3067041
2594	12.4	2.8	0.5	chr5	10581574	10581961	(170956298)	+	MLT2C1	LTR/ERVL	1	397	(0)	3067177
23	12.4	1.7	6.6	chr5	10650114	10650173	(170888086)	+	G-rich	Low_complexity	1	61	(0)	3067293
801	34.6	4.9	3.1	chr5	11512702	11513277	(170024982)	C	LTR101_Mam	LTR/ERVL	(111)	718	132	3068393
1510	21.6	8.4	4.7	chr5	14000024	14000470	(167537789)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	3071592
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
313	27.1	11.3	3.4	chr5	14672546	14672812	(166865447)	C	HAL1	LINE/L1	(2060)	447	157	3072520
561	21.2	10.2	3.2	chr5	14727690	14727881	(166810378)	+	L1MB2	LINE/L1	5965	6171	(0)	3072583
412	26.4	12.6	2.4	chr5	14728151	14728363	(166809896)	C	MIRb	SINE/MIR	(25)	243	6	3072584
271	30.8	13.6	1.5	chr5	15825822	15825969	(165712290)	C	MIRc	SINE/MIR	(37)	171	12	3074132
1004	32.6	7.9	5.7	chr5	16385952	16386885	(165151374)	C	L1MEd	LINE/L1	(6126)	960	4	3074931
14	18.8	0.0	2.6	chr5	17218573	17218610	(164319649)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	3076469
542	26.2	15.8	7.2	chr5	19577847	19578195	(161960064)	+	MLT1D	LTR/ERVL-MaLR	118	502	(3)	3079551
212	39.0	12.7	2.5	chr5	20025031	20025304	(161512955)	+	L2c	LINE/L2	3014	3319	(68)	3080108
3989	21.2	3.4	3.0	chr5	30041665	30043151	(151495108)	+	MER52A	LTR/ERV1	1	1755	(0)	3093157
309	14.0	5.0	1.7	chr5	31532727	31532784	(150005475)	C	MIR	SINE/MIR	(187)	75	16	3095069
345	32.7	6.3	11.4	chr5	31637099	31637536	(149900723)	C	L2c	LINE/L2	(0)	3387	2974	3095272
286	28.7	16.2	0.7	chr5	31637743	31637893	(149900366)	C	MIRb	SINE/MIR	(1)	267	89	3095273
16	23.4	5.5	0.0	chr5	32173873	32173927	(149364332)	+	(GTC)n	Simple_repeat	1	58	(0)	3096322
14	12.1	0.0	3.5	chr5	32173926	32173954	(149364305)	+	(CGC)n	Simple_repeat	1	29	(0)	3096323
24	14.9	6.7	0.0	chr5	36597002	36597061	(144941198)	+	(GTTTG)n	Simple_repeat	1	64	(0)	3103067
267	29.0	3.4	1.0	chr5	36744489	36744589	(144793670)	C	MIRb	SINE/MIR	(101)	107	5	3103277
7066	10.6	4.2	2.0	chr5	37764767	37765837	(143772422)	C	MER57-int	LTR/ERV1	(5084)	1103	1	3105000
14	20.2	0.0	0.0	chr5	38816315	38816348	(142721911)	+	(TCACAG)n	Simple_repeat	1	34	(0)	3106719
12590	11.8	3.2	5.2	chr5	40779204	40781286	(140756973)	C	Ricksha_c	DNA/MULE-MuDR	(0)	2048	8	3109403
1210	24.7	14.3	2.7	chr5	40781291	40781814	(140756445)	+	L1ME4b	LINE/L1	1623	2217	(290)	3109400
12	23.3	0.0	0.0	chr5	40835471	40835505	(140702754)	+	(TTGCTG)n	Simple_repeat	1	35	(0)	3109515
309	22.5	3.6	1.2	chr5	42020717	42020797	(139517462)	C	MLT1J	LTR/ERVL-MaLR	(332)	180	98	3111140
1356	33.2	10.9	2.5	chr5	42020820	42021608	(139516651)	C	L2c	LINE/L2	(192)	3195	2325	3111141
442	32.5	11.6	3.2	chr5	42507544	42508007	(139030252)	C	LTR33	LTR/ERVL	(3)	512	5	3111696
3041	24.9	5.0	2.1	chr5	43001331	43002252	(138536007)	C	L1MD	LINE/L1	(1845)	4301	3351	3112384
11	24.1	2.6	0.0	chr5	43603102	43603140	(137935119)	+	G-rich	Low_complexity	1	40	(0)	3113334
14	16.4	2.9	0.0	chr5	53109766	53109799	(128428460)	+	(AGGCGC)n	Simple_repeat	1	35	(0)	3119839
34	19.9	5.7	1.8	chr5	53216325	53216429	(128321830)	+	GA-rich	Low_complexity	1	111	(0)	3119978
645	36.9	1.2	0.6	chr5	53216488	53216809	(128321450)	C	MER102c	DNA/hAT-Charlie	(1)	330	7	3119979
13	26.3	0.0	5.5	chr5	54518246	54518300	(127019959)	+	(GCC)n	Simple_repeat	1	55	(0)	3121857
704	32.5	5.5	4.6	chr5	58424155	58424499	(123113760)	+	LTR33B	LTR/ERVL	9	356	(147)	3128090
616	26.9	8.5	0.6	chr5	58424751	58424933	(123113326)	C	MIR	SINE/MIR	(8)	254	56	3128091
44	0.0	0.0	0.0	chr5	59128016	59128053	(122410206)	+	(GT)n	Simple_repeat	1	38	(0)	3129094
5460	14.9	1.8	3.0	chr5	62074091	62075004	(119463255)	C	MER4D	LTR/ERV1	(0)	903	1	3133158
2437	15.6	4.0	5.1	chr5	66245799	66246251	(115292008)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	20	3139158
220	42.9	1.2	0.0	chr5	66246661	66246828	(115291431)	C	L2	LINE/L2	(566)	2853	2684	3139159
14	27.2	3.5	0.0	chr5	67004157	67004213	(114534046)	+	(GCCGCG)n	Simple_repeat	1	59	(0)	3140250
19	3.6	3.5	0.0	chr5	67166217	67166245	(114372014)	+	(CAGA)n	Simple_repeat	1	30	(0)	3140435
17	28.2	2.0	0.0	chr5	67999254	67999304	(113538955)	+	(AC)n	Simple_repeat	1	52	(0)	3141543
13	15.4	5.6	0.0	chr5	68215681	68215716	(113322543)	+	G-rich	Low_complexity	1	38	(0)	3141939
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
15	13.1	0.0	5.4	chr5	74648819	74648855	(106889404)	+	(GTTT)n	Simple_repeat	1	37	(0)	3152282
1957	15.4	7.7	4.5	chr5	75984961	75985409	(105552850)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	1	3154330
813	29.5	3.6	0.4	chr5	76228695	76228936	(105309323)	C	MIR	SINE/MIR	(7)	255	6	3154667
423	33.3	6.7	3.2	chr5	76458092	76458315	(105079944)	+	MIRb	SINE/MIR	8	237	(31)	3155073
11	24.6	0.0	2.5	chr5	76818919	76818958	(104719301)	+	(GCGGAGG)n	Simple_repeat	1	40	(0)	3155688
14	20.1	2.0	4.0	chr5	76818945	76818993	(104719266)	+	G-rich	Low_complexity	1	50	(0)	3155689
360	27.0	16.0	5.2	chr5	77380660	77381383	(104156876)	C	L2a	LINE/L2	(36)	3390	2559	3156618
1050	20.9	5.8	1.5	chr5	77672166	77672428	(103865831)	+	LTR33A_	LTR/ERVL	254	528	(3)	3156969
3083	12.4	7.9	4.9	chr5	77750668	77751152	(103787107)	C	MER4B	LTR/ERV1	(0)	610	95	3157113
2230	8.9	1.6	5.2	chr5	77751153	77751477	(103786782)	C	AluSq2	SINE/Alu	(0)	313	1	3157114
460	26.0	3.8	0.0	chr5	78708134	78708260	(102829999)	+	LTR16E2	LTR/ERVL	428	559	(9)	3158471
15	17.4	6.7	0.0	chr5	79689801	79689845	(101848414)	+	G-rich	Low_complexity	1	48	(0)	3160220
17	13.3	0.0	0.0	chr5	79689868	79689900	(101848359)	+	(CGGCCC)n	Simple_repeat	1	33	(0)	3160221
25	24.0	4.4	1.1	chr5	79689961	79690050	(101848209)	+	(GGAGGC)n	Simple_repeat	1	94	(0)	3160222
1825	18.8	7.5	5.1	chr5	80023606	80024058	(101514201)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	1	3160723
3607	17.3	8.3	6.2	chr5	80159463	80160289	(101377970)	+	MER21B	LTR/ERVL	1	846	(22)	3160967
30	11.2	0.0	6.2	chr5	80256092	80256156	(101282103)	+	(GCCCC)n	Simple_repeat	1	65	(0)	3161177
1390	12.4	1.7	2.6	chr5	80260273	80260504	(101277755)	+	MER39B	LTR/ERV1	424	653	(0)	3161187
50	6.7	0.0	0.0	chr5	80260663	80260725	(101277534)	+	(CAGTTC)n	Simple_repeat	1	63	(0)	3161188
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
267	22.9	4.1	2.8	chr5	81848443	81848514	(99689745)	+	LFSINE_Vert	SINE/tRNA	127	199	(260)	3163717
311	32.1	17.1	3.3	chr5	82142634	82143116	(99395143)	C	L2c	LINE/L2	(604)	2815	2253	3164183
630	31.4	19.1	2.0	chr5	82513563	82514016	(99024243)	C	LTR16E2	LTR/ERVL	(24)	544	4	3164744
227	35.7	3.0	1.5	chr5	82864693	82864823	(98673436)	C	LTR104_Mam	LTR/Gypsy	(745)	764	632	3165230
1248	23.8	12.5	1.1	chr5	83277198	83277558	(98260701)	+	MLT1I	LTR/ERVL-MaLR	1	408	(3)	3165743
1290	30.4	10.7	0.2	chr5	83358803	83359310	(98178949)	C	LTR16E2	LTR/ERVL	(0)	568	1	3165856
316	15.5	0.0	12.1	chr5	83359315	83359380	(98178879)	+	MLT1H	LTR/ERVL-MaLR	101	158	(514)	3165857
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
2398	22.8	3.2	1.8	chr5	85887670	85888231	(95650028)	+	MLT2B3	LTR/ERVL	117	697	(20)	3169053
1588	16.1	6.8	1.4	chr5	85888271	85888630	(95649629)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3169054
22	8.1	0.0	6.7	chr5	88141323	88141367	(93396892)	+	(GGA)n	Simple_repeat	1	45	(0)	3171928
46	0.0	0.0	0.0	chr5	88684765	88684803	(92853456)	+	(TC)n	Simple_repeat	1	39	(0)	3172665
248	31.3	10.4	3.0	chr5	90410217	90410384	(91127875)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	3174712
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
87	0.0	0.0	0.0	chr5	96808188	96808261	(84729998)	+	(GT)n	Simple_repeat	1	74	(0)	3183133
18	12.0	0.0	0.0	chr5	96808270	96808296	(84729963)	+	(T)n	Simple_repeat	1	27	(0)	3183134
17	9.1	0.0	0.0	chr5	100901859	100901882	(80636377)	+	(CA)n	Simple_repeat	1	24	(0)	3188316
10824	18.7	4.2	3.7	chr5	108795491	108797804	(72740455)	C	L1M1	LINE/L1	(5056)	2409	27	3198157
16	23.5	0.0	0.0	chr5	109105475	109105509	(72432750)	+	A-rich	Low_complexity	1	35	(0)	3198570
254	31.0	8.4	0.0	chr5	109105597	109105683	(72432576)	C	MIR3	SINE/MIR	(78)	130	36	3198571
194	24.0	0.0	3.9	chr5	109105727	109105778	(72432481)	+	L2c	LINE/L2	3313	3362	(25)	3198572
289	22.7	0.0	4.3	chr5	109105756	109105824	(72432435)	C	MIRb	SINE/MIR	(8)	260	195	3198573
384	28.3	3.9	0.0	chr5	109105826	109105924	(72432335)	+	L2a	LINE/L2	3305	3407	(19)	3198574
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
711	21.1	0.0	0.0	chr5	113109986	113110108	(68428151)	C	FLAM_A	SINE/Alu	(10)	132	10	3203840
615	31.4	11.3	1.1	chr5	113110343	113110706	(68427553)	C	L4_B_Mam	LINE/RTE-X	(206)	4735	4330	3203841
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
2664	20.3	11.0	0.8	chr5	115072552	115073146	(66465113)	C	LTR9C	LTR/ERV1	(0)	666	4	3206269
6171	13.8	1.7	0.0	chr5	115073150	115074029	(66464230)	C	HUERS-P3-int	LTR/ERV1	(0)	8919	8025	3206269
11586	16.5	3.1	1.4	chr5	115150544	115153510	(66384749)	+	L1PB1	LINE/L1	265	3321	(3541)	3206371
389	28.0	8.6	4.0	chr5	115296014	115296236	(66242023)	C	MIRb	SINE/MIR	(0)	268	35	3206586
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
391	32.9	4.8	6.0	chr5	116179275	116179442	(65358817)	C	MIR3	SINE/MIR	(28)	180	15	3207805
475	30.6	9.6	7.2	chr5	116559859	116560453	(64977806)	+	L2b	LINE/L2	2776	3374	(1)	3208273
31	14.1	0.0	0.0	chr5	117068757	117068805	(64469454)	+	(AT)n	Simple_repeat	1	49	(0)	3209107
269	26.3	8.7	0.0	chr5	117068811	117068905	(64469354)	C	MIR	SINE/MIR	(59)	203	100	3209108
314	8.5	2.1	0.0	chr5	117068906	117068952	(64469307)	C	U5	snRNA	(68)	48	1	3209109
434	27.4	5.4	1.9	chr5	117068953	117069060	(64469199)	C	MIR	SINE/MIR	(150)	112	1	3209108
835	26.1	8.7	6.8	chr5	117069083	117069223	(64469036)	C	L1M5	LINE/L1	(474)	5768	5609	3209110
215	15.7	3.8	1.9	chr5	119081359	119081410	(62456849)	C	L2a	LINE/L2	(1)	3425	3373	3211807
210	31.7	4.7	9.6	chr5	119354989	119355145	(62183114)	C	MIRc	SINE/MIR	(72)	196	48	3212217
384	32.1	2.6	0.5	chr5	122150311	122150495	(59387764)	C	LTR84b	LTR/ERVL	(0)	761	573	3215587
15115	11.8	5.0	2.4	chr5	122284752	122287390	(59250869)	C	L1PB1	LINE/L1	(4151)	2712	3	3215710
4071	27.3	7.0	7.0	chr5	123059739	123061605	(58476654)	+	HAL1	LINE/L1	13	1879	(628)	3216880
40	18.3	4.5	1.7	chr5	123089023	123089029	(58449230)	+	(TCCCTC)n	Simple_repeat	1	43	(64)	3216921
14	14.8	2.4	4.8	chr5	123089030	123089070	(58449189)	+	(TCCCC)n	Simple_repeat	1	42	(0)	3216922
18	36.3	2.2	0.0	chr5	124746798	124746887	(56791372)	+	GA-rich	Low_complexity	1	92	(0)	3219047
496	28.7	15.9	1.0	chr5	124872974	124873170	(56665089)	C	MIR	SINE/MIR	(10)	252	21	3219304
359	28.9	5.6	3.4	chr5	126108267	126108474	(55429785)	C	L1M5	LINE/L1	(318)	5806	5594	3220788
1774	18.0	8.6	1.5	chr5	126108513	126108909	(55429350)	+	MER61C	LTR/ERV1	14	425	(3)	3220789
8658	8.8	1.1	2.0	chr5	127271889	127273002	(54265257)	C	L1PA11	LINE/L1	(959)	5187	4090	3222619
2281	21.5	1.9	2.9	chr5	127273013	127273504	(54264755)	C	L1PA12	LINE/L1	(6486)	495	9	3222622
14	22.0	0.0	0.0	chr5	129460162	129460198	(52078061)	+	(CCACC)n	Simple_repeat	1	37	(0)	3225347
814	32.0	3.0	4.4	chr5	130233916	130234321	(51303938)	+	MLT2F	LTR/ERVL	264	663	(0)	3226312
15	10.8	3.3	0.0	chr5	131263905	131263934	(50274325)	+	(GGCGGG)n	Simple_repeat	1	31	(0)	3227655
14	27.8	1.4	4.2	chr5	131264260	131264329	(50273930)	+	G-rich	Low_complexity	1	71	(0)	3227656
31	0.0	0.0	0.0	chr5	132228034	132228062	(49310197)	+	(GGAGCC)n	Simple_repeat	1	29	(0)	3229059
22	16.0	7.9	0.0	chr5	132257589	132257651	(49280608)	+	G-rich	Low_complexity	1	68	(0)	3229104
16	3.8	3.5	3.3	chr5	132257625	132257653	(49280606)	+	(GGGC)n	Simple_repeat	1	30	(0)	3229105
27	3.4	0.0	0.0	chr5	132257658	132257687	(49280572)	+	(GGC)n	Simple_repeat	1	30	(0)	3229106
17	9.7	3.0	0.0	chr5	132257700	132257732	(49280527)	+	(TCCGGC)n	Simple_repeat	1	34	(0)	3229107
2036	15.8	0.0	0.3	chr5	132474063	132474372	(49063887)	C	AluJo	SINE/Alu	(3)	309	1	3229435
2279	17.1	4.2	7.3	chr5	132474373	132474831	(49063428)	C	MLT1D	LTR/ERVL-MaLR	(64)	441	1	3229434
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
15	18.1	2.6	0.0	chr5	133052191	133052250	(48486009)	+	(GCCGGA)n	Simple_repeat	1	61	(0)	3230468
264	33.0	3.7	2.8	chr5	133052684	133052789	(48485470)	+	L2b	LINE/L2	3266	3372	(3)	3230469
409	29.7	8.4	2.7	chr5	133234672	133234903	(48303356)	+	MIRc	SINE/MIR	8	268	(0)	3230732
16	27.0	2.9	2.8	chr5	133612580	133612649	(47925610)	+	(CCCG)n	Simple_repeat	1	72	(0)	3231171
1719	25.4	5.5	0.5	chr5	134273494	134273928	(47264331)	C	LTR16B2	LTR/ERVL	(2)	460	3	3232231
4490	24.1	4.3	5.8	chr5	134273933	134275146	(47263113)	C	ERV3-16A3_I-int	LTR/ERVL	(1)	5225	4031	3232231
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
11	24.6	0.0	2.5	chr5	135888409	135888448	(45649811)	+	(CTCCAGT)n	Simple_repeat	1	40	(0)	3234910
19253	10.2	1.1	1.8	chr5	136541753	136544965	(44993294)	C	HERVH-int	LTR/ERV1	(1894)	5819	1	3235812
14	12.0	0.0	3.5	chr5	138464200	138464228	(43074031)	+	GA-rich	Low_complexity	1	29	(0)	3238914
20	7.4	0.0	3.2	chr5	138640993	138641023	(42897236)	+	(GT)n	Simple_repeat	1	31	(0)	3239268
19	18.9	8.6	4.4	chr5	138641151	138641255	(42897004)	+	(TCCTTC)n	Simple_repeat	1	114	(0)	3239269
195	29.5	8.2	2.5	chr5	139395373	139395452	(42142807)	C	MIR3	SINE/MIR	(37)	171	87	3240685
186	25.3	14.4	0.0	chr5	139635751	139635833	(41902426)	C	MIR	SINE/MIR	(134)	128	32	3241227
16	21.6	3.6	1.8	chr5	139637422	139637476	(41900783)	+	(CCCCG)n	Simple_repeat	1	57	(0)	3241229
403	32.6	8.3	0.5	chr5	139638509	139638730	(41899529)	+	MIRb	SINE/MIR	28	268	(0)	3241230
383	28.8	17.1	0.0	chr5	139644939	139645098	(41893161)	+	MER91A	DNA/hAT-Tip100	4	196	(0)	3241236
15	15.5	3.4	8.2	chr5	139648213	139648271	(41889988)	+	GA-rich	Low_complexity	1	61	(0)	3241240
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
12	9.1	7.7	4.8	chr5	139648420	139648458	(41889801)	+	(AGAGC)n	Simple_repeat	1	42	(0)	3241242
14	9.6	0.0	0.0	chr5	139648803	139648825	(41889434)	+	(GCG)n	Simple_repeat	1	23	(0)	3241244
13	33.9	1.5	0.0	chr5	139648864	139648892	(41889367)	+	(CCCTCC)n	Simple_repeat	1	66	(0)	3241245
13	12.1	8.3	0.0	chr5	139648893	139648928	(41889331)	+	(CCCCT)n	Simple_repeat	1	39	(0)	3241246
251	24.0	9.1	2.9	chr5	139653719	139653821	(41884438)	+	AmnSINE1	SINE/5S-Deu-L2	296	405	(170)	3241253
217	33.2	11.1	6.5	chr5	139763472	139763924	(41774335)	+	L2b	LINE/L2	2674	3197	(190)	3241474
15	7.6	3.6	0.0	chr5	140146246	140146273	(41391986)	+	(CTCCC)n	Simple_repeat	1	29	(0)	3242077
2532	5.1	0.0	3.2	chr5	140157770	140158083	(41380176)	+	AluSz	SINE/Alu	1	304	(8)	3242096
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
46	6.0	0.0	0.0	chr5	140648008	140648060	(40890199)	+	(GT)n	Simple_repeat	1	53	(0)	3242991
12	12.4	8.6	0.0	chr5	140828238	140828272	(40709987)	+	(GCTGGA)n	Simple_repeat	1	38	(0)	3243277
12	12.4	8.6	0.0	chr5	140834530	140834564	(40703695)	+	(GCTGGA)n	Simple_repeat	1	38	(0)	3243283
294	27.9	12.5	3.3	chr5	141771498	141771649	(39766610)	+	MIRb	SINE/MIR	99	266	(2)	3244570
263	26.5	1.0	6.7	chr5	141811105	141811209	(39727050)	C	L2b	LINE/L2	(0)	3375	3277	3244661
15	5.5	0.0	0.0	chr5	142013246	142013264	(39524995)	+	(GT)n	Simple_repeat	1	19	(0)	3245046
14	28.5	3.1	1.5	chr5	142108653	142108717	(39429542)	+	G-rich	Low_complexity	1	67	(0)	3245269
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
2413	8.6	0.3	1.0	chr5	142161658	142161971	(39376288)	C	AluSq2	SINE/Alu	(1)	312	1	3245354
439	26.2	9.6	0.7	chr5	142284552	142284693	(39253566)	+	MIRb	SINE/MIR	42	197	(71)	3245636
419	33.5	9.2	2.9	chr5	142393274	142393547	(39144712)	C	L2c	LINE/L2	(0)	3387	3095	3245895
42	2.3	2.3	0.0	chr5	142685862	142685905	(38852354)	+	(AC)n	Simple_repeat	1	45	(0)	3246482
411	29.4	8.2	2.0	chr5	142864740	142864888	(38673371)	C	MIRb	SINE/MIR	(61)	207	49	3246796
274	26.5	5.0	4.3	chr5	142865719	142865856	(38672403)	+	L2	LINE/L2	2813	2951	(468)	3246799
10548	11.0	2.9	3.2	chr5	143327415	143329050	(38209209)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3247503
1999	12.6	6.6	0.8	chr5	143329051	143329409	(38208850)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3247503
4216	11.8	11.4	0.1	chr5	147460950	147461595	(34076664)	+	LTR9A1	LTR/ERV1	1	728	(0)	3254279
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
946	29.2	10.6	2.4	chr5	148733931	148734479	(32803780)	+	L2a	LINE/L2	2818	3426	(0)	3256342
232	37.0	2.7	0.7	chr5	149271433	149271579	(32266680)	+	L3	LINE/CR1	3838	3987	(112)	3257347
264	30.5	5.6	4.8	chr5	149320921	149321044	(32217215)	C	MamRep605	LTR?	(248)	601	477	3257468
631	27.4	17.3	2.5	chr5	149470940	149471528	(32066731)	C	L2a	LINE/L2	(0)	3426	2727	3257819
337	24.7	9.3	1.8	chr5	149633133	149633273	(31904986)	+	MIRc	SINE/MIR	83	253	(15)	3258174
220	30.0	10.1	0.0	chr5	149804825	149804994	(31733265)	C	L2a	LINE/L2	(404)	3015	2827	3258582
221	32.6	14.4	1.1	chr5	150154128	150154307	(31383952)	C	L2c	LINE/L2	(205)	3182	2975	3259319
666	26.0	4.5	5.3	chr5	150154307	150154550	(31383709)	+	MIRb	SINE/MIR	25	266	(2)	3259320
341	29.5	7.4	3.9	chr5	150160187	150160348	(31377911)	C	MIR1_Amn	SINE/MIR	(83)	179	9	3259335
16	18.4	7.4	4.6	chr5	150357906	150357986	(31180273)	+	(GCGGCCC)n	Simple_repeat	1	87	(0)	3259764
453	28.2	11.9	0.0	chr5	150410339	150410515	(31127744)	+	MIRb	SINE/MIR	53	253	(15)	3259867
420	30.1	2.9	2.2	chr5	150412427	150412565	(31125694)	C	MIR3	SINE/MIR	(57)	151	12	3259872
299	30.6	3.6	2.2	chr5	150436073	150436209	(31102050)	C	MIR3	SINE/MIR	(21)	187	49	3259929
2427	9.7	0.0	0.7	chr5	150481138	150481447	(31056812)	+	AluSg7	SINE/Alu	1	308	(1)	3260064
302	31.7	17.2	1.0	chr5	150481448	150481721	(31056538)	C	L2b	LINE/L2	(761)	2658	2317	3260059
13	14.7	3.1	10.4	chr5	150512175	150512239	(31026020)	+	(CATGTG)n	Simple_repeat	1	67	(0)	3260134
251	28.6	1.6	0.0	chr5	150512439	150512501	(31025758)	+	L2a	LINE/L2	3345	3408	(18)	3260135
1630	24.5	2.7	1.4	chr5	150560518	150560948	(30977311)	+	L1MC4	LINE/L1	7375	7811	(231)	3260241
4132	9.5	2.3	1.6	chr5	151164354	151164598	(30373661)	C	L1PB1	LINE/L1	(371)	5780	5535	3261292
18	17.9	0.0	0.0	chr5	151447684	151447722	(30090537)	+	(AGCCGG)n	Simple_repeat	1	39	(0)	3261885
363	29.0	13.7	0.0	chr5	151487747	151487891	(30050368)	+	MIR3	SINE/MIR	30	197	(11)	3261951
283	31.0	7.4	2.2	chr5	151772570	151772792	(29765467)	C	MIRb	SINE/MIR	(0)	262	23	3262616
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
324	20.2	9.8	0.0	chr5	153959828	153959955	(27578304)	+	L2b	LINE/L2	3013	3162	(213)	3266171
1887	16.1	0.0	0.0	chr5	154069576	154069849	(27468410)	+	AluSz6	SINE/Alu	1	274	(38)	3266353
3381	7.6	1.8	0.2	chr5	154069850	154070297	(27467962)	C	LTR22A	LTR/ERVK	(3)	455	1	3266354
7813	3.2	0.7	0.0	chr5	154072994	154073884	(27464375)	C	MER11D	LTR/ERVK	(0)	897	1	3266361
366	30.8	3.4	3.9	chr5	154107820	154108052	(27430207)	+	UCON78	DNA	209	440	(3)	3266438
12	12.6	2.5	7.3	chr5	154478952	154478991	(27059268)	+	GA-rich	Low_complexity	1	41	(0)	3267235
631	26.7	8.8	0.0	chr5	154520610	154520796	(27017463)	C	L1MC4	LINE/L1	(384)	7658	7454	3267340
217	29.9	4.9	5.8	chr5	154721408	154721510	(26816749)	C	MIR3	SINE/MIR	(46)	162	61	3267881
277	31.1	15.4	0.8	chr5	154721594	154721772	(26816487)	+	MIRc	SINE/MIR	2	211	(57)	3267882
5868	11.7	3.1	1.8	chr5	155044687	155045574	(26492685)	+	MER4D1	LTR/ERV1	1	900	(0)	3268543
8059	18.3	8.7	1.4	chr5	155935700	155937325	(25600934)	C	MER52A	LTR/ERV1	(0)	1755	1	3270052
188	30.9	8.6	6.7	chr5	156767785	156767933	(24770326)	+	L2	LINE/L2	2559	2710	(709)	3271337
15	9.7	0.0	0.0	chr5	157575230	157575251	(23963008)	+	(AG)n	Simple_repeat	1	22	(0)	3272957
469	30.3	11.8	2.0	chr5	157994368	157994781	(23543478)	C	L2b	LINE/L2	(1)	3425	2918	3273807
262	18.8	5.9	4.5	chr5	159332003	159332069	(22206190)	+	L1ME4b	LINE/L1	605	672	(220)	3275921
730	32.2	8.0	1.7	chr5	159774213	159774632	(21763627)	C	L2c	LINE/L2	(1)	3386	2938	3276697
193	25.0	0.0	0.0	chr5	159774793	159774836	(21763423)	C	L2b	LINE/L2	(213)	3162	3119	3276696
239	28.3	18.7	0.0	chr5	160133836	160133948	(21404311)	C	MIR3	SINE/MIR	(17)	191	53	3277444
19	8.2	0.0	0.0	chr5	160133954	160133979	(21404280)	+	(C)n	Simple_repeat	1	26	(0)	3277445
386	19.6	2.9	0.3	chr5	160134213	160134300	(21403959)	C	MIRb	SINE/MIR	(56)	206	117	3277446
275	24.1	1.3	3.9	chr5	160267079	160267166	(21271093)	+	L2a	LINE/L2	3251	3371	(55)	3277811
17	15.3	0.0	0.0	chr5	161848506	161848534	(19689725)	+	G-rich	Low_complexity	1	29	(0)	3280299
22	19.7	1.9	0.0	chr5	161848534	161848585	(19689674)	+	GA-rich	Low_complexity	1	53	(0)	3280300
429	24.2	7.7	5.5	chr5	163438308	163438434	(18099825)	C	MIRb	SINE/MIR	(18)	250	121	3282557
13	16.1	2.1	6.2	chr5	163564296	163564342	(17973917)	+	(TTATTT)n	Simple_repeat	1	48	(0)	3282753
310	25.0	11.4	2.5	chr5	164148301	164148419	(17389840)	C	L1M5	LINE/L1	(1324)	4822	4692	3283613
840	33.7	6.9	2.5	chr5	167121137	167121580	(14416679)	C	L2a	LINE/L2	(50)	3376	2912	3287847
204	28.6	4.2	6.2	chr5	167583630	167583726	(13954533)	C	L2c	LINE/L2	(8)	3379	3285	3288548
390	29.8	7.7	7.7	chr5	167583752	167584024	(13954235)	+	L2c	LINE/L2	2932	3204	(183)	3288549
463	33.0	4.0	6.1	chr5	167636929	167637157	(13901102)	+	MIR	SINE/MIR	6	229	(33)	3288625
648	21.8	4.6	5.2	chr5	168153177	168153350	(13384909)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	3289443
211	27.7	2.8	11.3	chr5	168153596	168153678	(13384581)	C	L2	LINE/L2	(469)	2950	2868	3289444
371	28.8	8.8	1.4	chr5	168709788	168710069	(12828190)	+	L1ME4c	LINE/L1	133	437	(393)	3290624
282	28.6	1.8	1.8	chr5	168710205	168710318	(12827941)	+	MIR	SINE/MIR	117	230	(32)	3290625
15	19.9	0.0	0.0	chr5	169080911	169080939	(12457320)	+	A-rich	Low_complexity	1	29	(0)	3291213
347	29.3	11.4	7.0	chr5	169641670	169642028	(11896231)	C	MLT1M	LTR/ERVL-MaLR	(183)	489	113	3292116
193	31.9	1.1	6.2	chr5	170352724	170352820	(11185439)	+	L3	LINE/CR1	4005	4096	(3)	3293438
231	26.4	0.0	0.0	chr5	170352882	170352953	(11185306)	+	Tigger14a	DNA/TcMar-Tigger	173	244	(80)	3293439
2297	11.0	0.0	0.0	chr5	170896548	170896848	(10641411)	+	AluSx1	SINE/Alu	1	301	(11)	3294477
2224	11.3	0.7	1.3	chr5	171315830	171316138	(10222121)	+	AluJb	SINE/Alu	1	307	(5)	3295015
333	28.1	15.1	1.6	chr5	171450372	171450559	(10087700)	C	MIRb	SINE/MIR	(1)	267	50	3295311
22	12.0	0.0	5.9	chr5	171450714	171450764	(10087495)	+	G-rich	Low_complexity	1	51	(0)	3295312
2678	25.6	8.2	6.1	chr5	171736745	171737268	(9800991)	C	Charlie13a	DNA/hAT-Charlie	(926)	588	64	3295935
664	33.8	1.4	0.0	chr5	171737360	171737575	(9800684)	+	MIRb	SINE/MIR	25	243	(25)	3295937
2636	5.5	0.0	0.0	chr5	172122616	172122922	(9415337)	C	AluY	SINE/Alu	(4)	307	1	3296733
808	22.8	6.9	0.0	chr5	172492240	172492524	(9045735)	C	L2a	LINE/L2	(237)	3189	2887	3297556
204	33.3	3.2	0.0	chr5	172492631	172492720	(9045539)	+	L3	LINE/CR1	3700	3792	(307)	3297557
333	30.6	5.9	1.4	chr5	172638302	172638447	(8899812)	C	L3	LINE/CR1	(459)	3640	3488	3297888
289	30.4	6.9	4.0	chr5	172638628	172638837	(8899422)	C	L2b	LINE/L2	(8)	3379	3177	3297889
572	23.1	1.5	0.0	chr5	172684306	172684435	(8853824)	C	MER5A	DNA/hAT-Charlie	(57)	132	1	3297974
687	30.5	8.8	2.0	chr5	172861025	172861539	(8676720)	+	L2a	LINE/L2	2855	3425	(1)	3298373
13	17.2	3.9	5.7	chr5	172983718	172983768	(8554491)	+	G-rich	Low_complexity	1	53	(0)	3298674
897	23.1	2.7	2.3	chr5	173316137	173316357	(8221902)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	3299405
898	27.3	8.4	3.1	chr5	173671478	173672022	(7866237)	C	L2a	LINE/L2	(85)	3290	2717	3300024
1231	28.8	3.4	1.2	chr5	173715528	173716015	(7822244)	C	L1ME3D	LINE/L1	(216)	6026	5528	3300124
252	36.7	4.1	1.6	chr5	174491370	174491560	(7046699)	+	L2b	LINE/L2	2804	2999	(420)	3301586
180	36.4	5.0	5.0	chr5	174532514	174532652	(7005607)	C	MIR	SINE/MIR	(101)	161	23	3301677
3852	13.1	0.4	0.9	chr5	175120168	175120699	(6417560)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3302851
1155	24.9	10.5	6.8	chr5	175120700	175121085	(6417174)	C	MLT1C	LTR/ERVL-MaLR	(48)	419	7	3302850
197	24.5	0.0	2.0	chr5	175681551	175681600	(5856659)	C	MIR3	SINE/MIR	(6)	202	154	3303916
19	0.0	0.0	0.0	chr5	175683092	175683112	(5855147)	+	(A)n	Simple_repeat	1	21	(0)	3303920
198	34.6	8.9	2.9	chr5	175775501	175775637	(5762622)	C	L2c	LINE/L2	(0)	3387	3242	3304099
427	29.0	0.0	0.0	chr5	175797987	175798086	(5740173)	C	MIR3	SINE/MIR	(79)	129	30	3304150
509	18.4	16.9	5.6	chr5	175798153	175798313	(5739946)	+	MIRb	SINE/MIR	79	261	(7)	3304151
12	15.7	2.6	5.0	chr5	176388390	176388428	(5149831)	+	(CCCGGCC)n	Simple_repeat	1	40	(0)	3305144
14	18.7	2.2	4.3	chr5	176416387	176416432	(5121827)	+	(CTCCG)n	Simple_repeat	1	47	(0)	3305205
243	33.8	1.6	0.2	chr5	176542088	176542197	(4996062)	+	MIR	SINE/MIR	51	161	(101)	3305493
222	31.5	6.4	2.0	chr5	176542208	176542356	(4995903)	+	MIRb	SINE/MIR	21	176	(92)	3305494
210	20.9	0.0	0.0	chr5	176542702	176542744	(4995515)	+	MIRc	SINE/MIR	83	125	(143)	3305495
23	21.1	1.4	2.9	chr5	176630193	176630261	(4907998)	+	(CCATCC)n	Simple_repeat	1	70	(0)	3305696
13	4.8	12.5	3.7	chr5	176630473	176630494	(4907765)	+	(CTCGCGCAG)n	Simple_repeat	1	25	(0)	3305697
27	0.0	0.0	0.0	chr5	176630495	176630520	(4907739)	+	(GCTCCG)n	Simple_repeat	1	26	(0)	3305698
13	4.8	12.5	3.7	chr5	176630521	176630545	(4907714)	+	(CTCGCGCAG)n	Simple_repeat	8	33	(0)	3305699
272	30.3	10.8	5.7	chr5	176736886	176737060	(4801199)	+	MamTip2	DNA/hAT-Tip100	43	227	(78)	3305896
578	27.4	1.8	0.6	chr5	176737757	176737925	(4800334)	C	MLT1K	LTR/ERVL-MaLR	(319)	276	106	3305898
392	31.4	7.5	0.6	chr5	176784458	176784630	(4753629)	C	MLT1K	LTR/ERVL-MaLR	(329)	266	81	3305982
15	11.1	0.0	3.2	chr5	176810418	176810448	(4727811)	+	(CCCCG)n	Simple_repeat	1	31	(0)	3306042
18	12.9	5.4	5.1	chr5	176810491	176810571	(4727688)	+	(CGGCG)n	Simple_repeat	1	81	(0)	3306043
667	31.6	6.2	6.4	chr5	177109809	177110039	(4428220)	C	L2b	LINE/L2	(2)	3373	3152	3306681
30	0.0	0.0	0.0	chr5	177110040	177110067	(4428192)	+	(CCGGCT)n	Simple_repeat	1	28	(0)	3306682
667	31.6	6.2	6.4	chr5	177110068	177110275	(4427984)	C	L2b	LINE/L2	(224)	3151	2935	3306681
12	15.9	2.4	7.0	chr5	177111923	177111964	(4426295)	+	(CCTCT)n	Simple_repeat	1	43	(0)	3306688
31	43.2	2.9	0.7	chr5	177378530	177378807	(4159452)	+	(GGAGCCT)n	Simple_repeat	1	286	(0)	3307291
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
233	20.9	0.0	0.0	chr5	177611060	177611102	(3927157)	+	MER91C	DNA/hAT-Tip100	1	43	(97)	3307725
13	14.5	5.9	5.6	chr5	178107953	178108003	(3430256)	+	G-rich	Low_complexity	1	54	(0)	3308574
240	28.9	17.5	0.0	chr5	178108043	178108146	(3430113)	C	MIRb	SINE/MIR	(117)	151	26	3308575
16	14.2	5.1	0.0	chr5	178113402	178113440	(3424819)	+	G-rich	Low_complexity	1	41	(0)	3308587
18	24.7	7.6	1.0	chr5	178113595	178113686	(3424573)	+	(CCGGCG)n	Simple_repeat	1	99	(0)	3308588
923	23.1	9.7	1.0	chr5	178126530	178127102	(3411157)	+	MER34C2	LTR/ERV1	1	558	(13)	3308605
1778	27.7	19.3	1.7	chr5	178292854	178294075	(3244184)	C	L2	LINE/L2	(1255)	2164	676	3308936
668	29.5	5.1	3.9	chr5	178323754	178323986	(3214273)	C	MIRb	SINE/MIR	(9)	259	24	3308983
253	30.5	3.5	0.0	chr5	178556059	178556140	(2982119)	+	L1ME4b	LINE/L1	451	535	(357)	3309394
5052	15.4	2.7	0.4	chr5	179059219	179060061	(2478198)	+	L1MA4A	LINE/L1	5436	6298	(5)	3310303
25	18.1	1.5	3.0	chr5	179806880	179806945	(1731314)	+	G-rich	Low_complexity	1	67	(0)	3311614
578	13.7	1.0	0.0	chr5	179814153	179814247	(1724012)	+	MER34A	LTR/ERV1	476	571	(0)	3311633
29	16.4	4.4	0.0	chr5	179907885	179907952	(1630307)	+	(CGGAG)n	Simple_repeat	1	71	(0)	3311776
1704	25.6	10.2	2.2	chr5	180021697	180022296	(1515963)	C	L1MC4	LINE/L1	(151)	7891	7238	3311939
252	30.5	12.4	3.3	chr5	180136808	180137078	(1401181)	+	MLT1K	LTR/ERVL-MaLR	136	434	(161)	3312132
15	20.0	0.0	5.9	chr5	180292171	180292221	(1246038)	+	G-rich	Low_complexity	1	51	(0)	3312366
235	28.4	9.1	1.7	chr5	180831010	180831181	(707078)	C	MER67A	LTR/ERV1	(475)	186	1	3313310
13	0.0	0.0	0.0	chr5	180831186	180831202	(707057)	+	(CCG)n	Simple_repeat	1	17	(0)	3313311
986	25.8	7.5	2.8	chr5	180866798	180867406	(670853)	+	L1ME4b	LINE/L1	150	536	(356)	3313373
2733	16.6	0.4	2.3	chr5	180867409	180867616	(670643)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	263	3313374
3733	6.2	6.0	0.0	chr5	180867617	180867777	(670482)	+	LTR2C	LTR/ERV1	4	194	(307)	3313375
12	20.1	5.0	0.0	chr5	181053620	181053659	(484600)	+	G-rich	Low_complexity	1	42	(0)	3313576
11	25.1	0.0	4.3	chr5	181205341	181205386	(332873)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	3313847
606	5.6	0.0	0.0	chr5	181206868	181206939	(331320)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3313850
2010	11.7	2.9	2.3	chr5	181279515	181279822	(258437)	+	AluSx	SINE/Alu	2	311	(1)	3313975
298	18.2	0.0	1.5	chr5	181279825	181279891	(258368)	+	L1M2	LINE/L1	2769	2834	(3309)	3313976
3900	16.1	10.5	9.8	chr5	181279892	181281569	(256690)	+	REP522	Satellite/telo	1	1690	(1255)	3313977
1195	18.1	20.2	3.4	chr6	674757	675200	(170130779)	+	MER74A	LTR/ERVL	34	556	(2)	3315088
37	14.8	4.2	3.0	chr6	1382035	1382129	(169423850)	+	(GCGGAG)n	Simple_repeat	1	99	(0)	3316028
1519	21.2	2.2	4.6	chr6	1524332	1524697	(169281282)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	1	3316257
15	25.2	4.3	2.8	chr6	2245428	2245498	(168560481)	+	(GGCG)n	Simple_repeat	1	72	(0)	3317164
14	19.0	5.0	4.8	chr6	2634350	2634409	(168171570)	+	(CCCGCAG)n	Simple_repeat	1	63	(0)	3317715
26	22.4	3.7	4.5	chr6	3053779	3053885	(167752094)	+	(CGCCA)n	Simple_repeat	1	111	(0)	3318323
2237	8.8	3.6	0.3	chr6	3053985	3054278	(167751701)	+	AluSx1	SINE/Alu	1	304	(8)	3318324
2585	18.2	2.6	5.0	chr6	3220406	3220888	(167585091)	+	L1MB7	LINE/L1	5701	6167	(17)	3318596
337	28.3	5.4	14.0	chr6	3892575	3892992	(166912987)	+	MLT1J	LTR/ERVL-MaLR	105	583	(27)	3319608
23549	11.3	0.7	2.4	chr6	4405354	4411105	(166394874)	+	L1PA8A	LINE/L1	5	5680	(781)	3320387
473	29.9	9.3	3.3	chr6	4656008	4656218	(166149761)	+	L1MEh	LINE/L1	349	573	(1662)	3320811
9188	8.6	12.8	1.7	chr6	4724470	4725869	(166080110)	C	LTR12C	LTR/ERV1	(1)	1578	2	3320950
13	8.7	0.0	3.7	chr6	4775765	4775791	(166030188)	+	(GGTGG)n	Simple_repeat	1	27	(0)	3321051
42	22.5	1.8	6.9	chr6	4776143	4776313	(166029666)	+	(GCCCC)n	Simple_repeat	1	174	(0)	3321052
20	7.6	2.0	8.0	chr6	4776454	4776502	(166029477)	+	(CCGC)n	Simple_repeat	1	50	(0)	3321053
2442	25.2	12.9	4.9	chr6	4793440	4794658	(166011321)	C	L2a	LINE/L2	(421)	2998	1668	3321078
866	26.5	12.7	3.5	chr6	4794698	4795347	(166010632)	C	L1M5	LINE/L1	(1665)	4481	3764	3321076
1581	13.0	0.0	14.7	chr6	4897635	4897817	(165908162)	+	AluJr	SINE/Alu	1	138	(174)	3321189
1905	8.3	0.8	1.2	chr6	4897818	4898071	(165907908)	+	AluY	SINE/Alu	43	295	(16)	3321190
1617	15.7	2.0	7.4	chr6	4907349	4907672	(165898307)	C	AluJb	SINE/Alu	(6)	306	1	3321203
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
264	29.6	2.0	10.9	chr6	5032706	5032815	(165773164)	+	MIR3	SINE/MIR	97	196	(12)	3321395
24	25.9	2.3	2.3	chr6	5032868	5032953	(165773026)	+	(TCC)n	Simple_repeat	1	88	(0)	3321396
12	5.6	0.0	0.0	chr6	5085782	5085800	(165720179)	+	(GCA)n	Simple_repeat	1	19	(0)	3321506
263	29.2	0.0	0.0	chr6	5528528	5528592	(165277387)	+	MIRb	SINE/MIR	27	91	(177)	3322181
655	20.2	5.2	3.5	chr6	6169033	6169201	(164636778)	+	MER5B	DNA/hAT-Charlie	6	177	(1)	3323071
550	23.8	5.3	0.7	chr6	6169299	6169442	(164636537)	+	MER5A1	DNA/hAT-Charlie	16	166	(0)	3323072
340	28.7	2.7	13.3	chr6	7086210	7086374	(163719605)	+	MIR3	SINE/MIR	33	179	(29)	3324572
15	18.8	7.0	1.6	chr6	7541463	7541519	(163264460)	+	(GGCGCAG)n	Simple_repeat	1	61	(0)	3325356
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
1792	14.4	0.0	5.5	chr6	7550043	7550354	(163255625)	C	AluJb	SINE/Alu	(17)	295	1	3325370
2195	11.4	0.0	0.7	chr6	7774268	7774566	(163031413)	+	AluSx1	SINE/Alu	1	297	(15)	3325707
18	27.0	0.0	0.0	chr6	10412177	10412229	(160393750)	+	(GAGC)n	Simple_repeat	1	53	(0)	3329448
14	26.4	5.1	0.0	chr6	10412300	10412358	(160393621)	+	A-rich	Low_complexity	1	62	(0)	3329449
54	31.0	3.2	1.8	chr6	10412302	10412397	(160393582)	+	GA-rich	Low_complexity	1	269	(0)	3329450
31	26.7	2.9	5.7	chr6	10412398	10412567	(160393412)	+	G-rich	Low_complexity	1	175	(0)	3329451
13	14.7	3.3	0.0	chr6	10421316	10421345	(160384634)	+	G-rich	Low_complexity	1	31	(0)	3329455
50	0.0	0.0	0.0	chr6	10423592	10423634	(160382345)	+	(TG)n	Simple_repeat	1	43	(0)	3329457
2017	10.2	1.7	6.0	chr6	10484000	10484313	(160321666)	+	AluSx	SINE/Alu	5	304	(8)	3329576
270	26.5	4.8	1.0	chr6	10564163	10564261	(160241718)	C	MIR	SINE/MIR	(67)	195	93	3329742
217	31.3	2.8	1.9	chr6	10564454	10564564	(160241415)	+	MIRb	SINE/MIR	8	125	(143)	3329743
3186	14.7	5.4	11.6	chr6	10733051	10733786	(160072193)	C	LTR12_	LTR/ERV1	(0)	688	1	3330080
16	33.2	0.0	0.0	chr6	11073342	11073394	(159732585)	+	(TA)n	Simple_repeat	1	53	(0)	3330680
552	21.4	9.7	0.0	chr6	11073550	11073680	(159732299)	C	MER5A1	DNA/hAT-Charlie	(21)	145	1	3330681
20	11.2	0.0	0.0	chr6	12011271	12011299	(158794680)	+	(C)n	Simple_repeat	1	29	(0)	3332070
22	20.3	2.7	4.0	chr6	12011623	12011695	(158794284)	+	G-rich	Low_complexity	1	75	(0)	3332071
14	18.5	7.0	0.0	chr6	12013074	12013116	(158792863)	+	GA-rich	Low_complexity	1	46	(0)	3332079
12	8.9	4.2	0.0	chr6	12013137	12013160	(158792819)	+	(CCT)n	Simple_repeat	1	25	(0)	3332080
1594	27.0	10.2	2.3	chr6	12111339	12111903	(158694076)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	13	3332207
54	24.2	5.8	1.8	chr6	12749435	12749641	(158056338)	+	(CTCTCC)n	Simple_repeat	1	219	(0)	3333136
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
310	27.8	7.4	5.3	chr6	13420841	13421011	(157384968)	+	L1M5	LINE/L1	5586	5760	(364)	3334227
9293	9.2	12.9	0.0	chr6	13510219	13511591	(157294388)	C	LTR12C	LTR/ERV1	(1)	1578	3	3334397
1320	23.2	6.2	1.3	chr6	13678416	13678795	(157127184)	+	MER74B	LTR/ERVL	139	538	(84)	3334671
13	19.4	4.9	0.0	chr6	14211240	14211280	(156594699)	+	(GCCTC)n	Simple_repeat	1	43	(0)	3335634
1512	21.4	4.3	5.9	chr6	14872279	14872807	(155933172)	C	MER39	LTR/ERV1	(2)	705	1	3336689
342	29.9	10.2	2.1	chr6	15243942	15244161	(155561818)	C	MIRc	SINE/MIR	(16)	252	11	3337656
748	26.4	10.6	2.3	chr6	15525668	15526173	(155279806)	+	L1MEd	LINE/L1	1012	1516	(696)	3338027
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
15	5.6	0.0	0.0	chr6	15663182	15663200	(155142779)	+	(T)n	Simple_repeat	1	19	(0)	3338220
332	24.8	5.6	1.9	chr6	16544047	16544149	(154261830)	+	MIR3	SINE/MIR	78	184	(24)	3339672
289	33.2	5.2	7.8	chr6	16631895	16632113	(154173866)	+	MIRb	SINE/MIR	12	228	(40)	3339817
2490	11.9	0.0	0.0	chr6	16750957	16751268	(154054711)	C	AluSx1	SINE/Alu	(0)	312	1	3340003
18	12.8	0.0	0.0	chr6	18122654	18122687	(152683292)	+	(ACGGTC)n	Simple_repeat	1	34	(0)	3342482
248	28.3	5.0	0.0	chr6	18122833	18122963	(152683016)	C	MIRc	SINE/MIR	(78)	190	45	3342483
41	0.0	0.0	0.0	chr6	20211970	20212004	(150593975)	+	(AC)n	Simple_repeat	1	35	(0)	3345604
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
351	33.3	0.6	10.5	chr6	20266009	20266199	(150539780)	+	MIR3	SINE/MIR	20	191	(17)	3345716
19	0.0	0.0	0.0	chr6	21512435	21512455	(149293524)	+	(A)n	Simple_repeat	1	21	(0)	3347776
342	29.8	3.0	0.5	chr6	21512456	21512642	(149293337)	+	MIRc	SINE/MIR	19	218	(50)	3347777
285	30.6	4.8	0.0	chr6	21601736	21601833	(149204146)	+	MIRc	SINE/MIR	26	128	(140)	3347926
1839	22.0	6.5	5.9	chr6	21653219	21653711	(149152268)	+	MLT2B3	LTR/ERVL	5	500	(54)	3348040
4414	10.6	2.5	0.6	chr6	21653722	21654350	(149151629)	C	LTR9B	LTR/ERV1	(2)	642	2	3348041
203	35.5	2.2	2.9	chr6	23410636	23410774	(147395205)	+	L2c	LINE/L2	3072	3209	(178)	3350510
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
241	19.1	0.0	0.0	chr6	24998967	24999008	(145806971)	+	MER96B	DNA/hAT-Tip100	194	235	(182)	3352916
3758	12.9	6.0	3.0	chr6	24999091	24999558	(145806421)	+	MER41E	LTR/ERV1	1	499	(96)	3352917
859	18.3	18.1	0.0	chr6	25087119	25087326	(145718653)	+	MIR	SINE/MIR	8	261	(1)	3353070
13	12.7	2.6	5.1	chr6	25279351	25279388	(145526591)	+	(CCCCG)n	Simple_repeat	1	39	(0)	3353384
1939	15.9	7.8	5.8	chr6	25637498	25637964	(145168015)	C	MER31A	LTR/ERV1	(8)	477	1	3353890
590	26.8	10.3	1.2	chr6	25637965	25638210	(145167769)	+	MLT1G1	LTR/ERVL-MaLR	252	522	(57)	3353889
12	15.7	2.6	5.0	chr6	26234322	26234360	(144571619)	+	G-rich	Low_complexity	1	40	(0)	3354870
1499	16.9	8.9	0.5	chr6	27078759	27079066	(143726913)	+	MER61B	LTR/ERV1	1	427	(0)	3356253
652	26.4	2.6	1.9	chr6	27079233	27079416	(143726563)	+	MIR	SINE/MIR	1	180	(88)	3356254
215	27.5	10.8	1.1	chr6	28598136	28598227	(142207752)	+	MIR	SINE/MIR	35	136	(126)	3358883
18	3.8	0.0	3.5	chr6	28598364	28598392	(142207587)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3358884
2016	10.0	3.8	0.0	chr6	28734114	28734393	(142071586)	C	AluSx	SINE/Alu	(21)	291	1	3359115
60739	13.7	1.0	1.0	chr6	28766731	28773949	(142032030)	C	HERVS71-int	LTR/ERV1	(41)	8937	1693	3359190
3671	12.2	2.7	0.4	chr6	28775960	28776502	(142029477)	C	LTR6A	LTR/ERV1	(0)	564	9	3359190
4542	8.9	0.2	2.2	chr6	28776602	28777224	(142028755)	+	LTR71B	LTR/ERV1	1	610	(0)	3359192
2223	6.6	3.9	2.3	chr6	28837820	28838120	(141967859)	+	AluY	SINE/Alu	1	306	(5)	3359317
619	1.4	0.0	0.0	chr6	28838444	28838515	(141967464)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359318
10238	11.3	2.9	3.5	chr6	28875177	28875684	(141930295)	C	LTR57-int	LTR/ERVL	(4834)	509	1	3359361
2524	13.3	3.2	2.9	chr6	28875685	28875869	(141930110)	C	LTR57	LTR/ERVL	(0)	411	226	3359361
461	14.5	0.0	2.4	chr6	28985714	28985796	(141820183)	+	AluJo	SINE/Alu	45	125	(187)	3359581
18	13.7	1.7	8.3	chr6	29632912	29632970	(141173009)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3360372
22	15.1	1.8	3.6	chr6	29633070	29633124	(141172855)	+	G-rich	Low_complexity	1	56	(0)	3360373
20	18.2	2.9	2.8	chr6	29927123	29927179	(140878800)	+	G-rich	Low_complexity	1	57	(0)	3360836
857	15.7	2.5	1.9	chr6	30171502	30171663	(140634316)	C	MER5A1	DNA/hAT-Charlie	(1)	165	3	3361190
13	10.7	9.5	2.2	chr6	30647306	30647347	(140158632)	+	GA-rich	Low_complexity	1	46	(0)	3361953
12	12.8	8.8	0.0	chr6	30744726	30744759	(140061220)	+	(GTGA)n	Simple_repeat	1	37	(0)	3362128
488	28.8	8.9	4.8	chr6	30826816	30827289	(139978690)	C	L1MEi	LINE/L1	(1352)	860	335	3362329
16	6.9	0.0	8.3	chr6	31117114	31117149	(139688830)	+	(GCT)n	Simple_repeat	1	36	(0)	3362851
2607	5.8	0.0	0.0	chr6	31399252	31399559	(139406420)	+	AluY	SINE/Alu	1	308	(3)	3363277
2457	5.7	1.3	0.0	chr6	31494551	31494850	(139311129)	+	AluSp	SINE/Alu	2	305	(8)	3363403
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
356	31.5	4.2	0.5	chr6	31775597	31775781	(139030198)	+	L2	LINE/L2	2817	3008	(411)	3363871
2312	7.3	2.6	0.3	chr6	31863224	31863524	(138942455)	C	AluSx	SINE/Alu	(4)	308	1	3364051
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
472	34.9	4.6	0.5	chr6	32048774	32048983	(138756996)	C	MIR	SINE/MIR	(32)	230	12	3364312
680	30.1	10.1	11.1	chr6	32104937	32105563	(138700416)	+	L2c	LINE/L2	2741	3387	(0)	3364389
1263	23.1	10.2	3.2	chr6	32105720	32106222	(138699757)	+	L1ME3A	LINE/L1	5538	6106	(67)	3364394
255	36.2	10.7	3.1	chr6	32146182	32146691	(138659288)	C	L2	LINE/L2	(459)	2960	2408	3364470
223	30.2	0.0	0.0	chr6	32193124	32193176	(138612803)	+	L2b	LINE/L2	3317	3369	(6)	3364526
25	20.6	0.0	3.1	chr6	33200310	33200374	(137605605)	+	(CCG)n	Simple_repeat	1	65	(0)	3365969
12	17.0	9.2	4.2	chr6	33204797	33204861	(137601118)	+	(CTCTGACC)n	Simple_repeat	1	71	(0)	3365972
17	15.3	0.0	0.0	chr6	33276840	33276868	(137529111)	+	(T)n	Simple_repeat	1	29	(0)	3366123
17	29.4	3.1	1.5	chr6	33425578	33425642	(137380337)	+	GA-rich	Low_complexity	1	67	(0)	3366425
377	28.5	10.2	4.3	chr6	33593428	33593684	(137212295)	C	L2c	LINE/L2	(69)	3318	3045	3366798
431	34.7	12.0	3.4	chr6	33609902	33610615	(137195364)	+	L2b	LINE/L2	2586	3375	(0)	3366842
2152	13.1	0.3	1.9	chr6	33715847	33716160	(137089819)	C	AluJo	SINE/Alu	(3)	309	1	3367024
966	15.2	7.5	3.0	chr6	33716161	33716363	(137089616)	C	MIR	SINE/MIR	(37)	225	13	3367025
2243	9.6	0.0	1.0	chr6	33954102	33954393	(136851586)	+	AluSc	SINE/Alu	1	289	(20)	3367357
260	26.5	20.8	1.5	chr6	33954398	33954738	(136851241)	+	L2	LINE/L2	2644	3067	(352)	3367355
7633	12.4	3.8	3.5	chr6	34202021	34203292	(136602687)	C	MER52C	LTR/ERV1	(0)	1278	4	3367842
13	17.4	0.0	2.9	chr6	34280337	34280370	(136525609)	+	A-rich	Low_complexity	1	34	(0)	3368025
21	19.0	5.2	3.7	chr6	35047836	35047912	(135758067)	+	(TCATG)n	Simple_repeat	1	81	(0)	3369661
12	28.7	0.0	0.0	chr6	35064778	35064819	(135741160)	+	(CCCCCT)n	Simple_repeat	1	42	(0)	3369677
1531	16.0	3.4	7.2	chr6	35070048	35070152	(135735827)	C	AluJb	SINE/Alu	(204)	108	1	3369682
773	16.1	1.6	10.1	chr6	35070318	35070484	(135735495)	+	MER4D1	LTR/ERV1	392	556	(344)	3369684
2062	9.8	2.5	0.0	chr6	35070485	35070783	(135735196)	C	AluY	SINE/Alu	(0)	311	1	3369685
8325	21.2	7.5	6.0	chr6	35096061	35097251	(135708728)	+	MER65-int	LTR/ERV1	12	1216	(3655)	3369713
1085	25.5	13.0	5.5	chr6	36820967	36821458	(133984521)	C	L2a	LINE/L2	(162)	3264	2756	3373363
313	18.8	9.2	0.0	chr6	36841121	36841189	(133964790)	+	Tigger19b	DNA/TcMar-Tigger	380	455	(95)	3373408
235	28.9	14.9	1.0	chr6	36848590	36848687	(133957292)	C	L3b	LINE/CR1	(239)	4993	4880	3373432
17	27.3	1.6	1.6	chr6	36986054	36986116	(133819863)	+	(AGCTCC)n	Simple_repeat	1	64	(0)	3373669
251	28.9	1.2	4.6	chr6	37048303	37048389	(133757590)	C	MIR3	SINE/MIR	(23)	185	102	3373813
816	15.6	16.7	0.6	chr6	37048645	37048805	(133757174)	C	MER53	DNA/hAT	(0)	193	2	3373814
450	22.0	2.8	1.6	chr6	37051906	37052035	(133753944)	+	MIRc	SINE/MIR	30	157	(111)	3373818
661	32.0	6.4	2.8	chr6	37397818	37398209	(133407770)	C	L2b	LINE/L2	(0)	3375	2969	3374605
1974	12.6	16.8	0.8	chr6	37540423	37540781	(133265198)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3374855
241	34.9	3.0	5.8	chr6	37570584	37570720	(133235259)	+	L2c	LINE/L2	3253	3385	(2)	3374912
14	25.3	2.0	2.0	chr6	37649091	37649139	(133156840)	+	(CGG)n	Simple_repeat	1	50	(0)	3375062
273	28.1	13.5	6.2	chr6	38064019	38064162	(132741817)	C	Charlie4z	DNA/hAT-Charlie	(11)	156	1	3375868
933	26.9	5.6	0.0	chr6	38064281	38064514	(132741465)	C	MIR	SINE/MIR	(0)	262	15	3375869
1170	23.9	11.8	2.2	chr6	38282606	38283055	(132522924)	+	L2a	LINE/L2	2927	3425	(1)	3376135
307	32.0	3.9	7.0	chr6	38932987	38933201	(131872778)	C	MamGypLTR3	LTR/Gypsy	(149)	745	538	3377232
330	30.3	4.3	4.7	chr6	39892248	39892466	(130913513)	C	MIR	SINE/MIR	(30)	238	20	3378720
579	22.9	4.8	1.3	chr6	39934723	39934881	(130871098)	C	MER96B	DNA/hAT-Tip100	(3)	414	250	3378784
14582	24.2	4.3	2.9	chr6	40201634	40207190	(130598789)	C	L1MA9	LINE/L1	(1839)	5720	401	3379074
419	27.4	11.1	6.2	chr6	40329014	40329336	(130476643)	C	L2c	LINE/L2	(25)	3362	3022	3379289
1348	26.1	5.0	4.6	chr6	40359020	40359493	(130446486)	C	L1MD2	LINE/L1	(6046)	501	26	3379335
1068	29.7	9.5	3.1	chr6	40359615	40360412	(130445567)	C	L2a	LINE/L2	(0)	3426	2569	3379336
31	8.1	0.0	0.0	chr6	40585837	40585876	(130220103)	+	(AC)n	Simple_repeat	1	40	(0)	3379729
12	7.2	10.3	0.0	chr6	40585972	40586000	(130219979)	+	(TGTC)n	Simple_repeat	1	32	(0)	3379730
424	28.1	1.5	1.5	chr6	40706251	40706380	(130099599)	+	LTR85b	LTR/Gypsy?	25	154	(630)	3379954
14	20.8	1.8	5.4	chr6	40706446	40706500	(130099479)	+	G-rich	Low_complexity	1	56	(0)	3379955
18	7.5	0.0	0.0	chr6	40720389	40720416	(130085563)	+	(GGGA)n	Simple_repeat	1	28	(0)	3379979
2441	6.2	0.0	0.3	chr6	40946050	40946340	(129859639)	C	AluSc	SINE/Alu	(19)	290	1	3380354
1750	20.2	0.8	7.4	chr6	40946363	40946780	(129859199)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3380355
204	21.9	14.6	0.0	chr6	40947221	40947302	(129858677)	+	X7A_LINE	LINE/CR1	53	148	(119)	3380356
2223	10.6	0.3	1.7	chr6	40947303	40947604	(129858375)	+	AluSx	SINE/Alu	1	298	(14)	3380357
1919	11.9	1.7	3.6	chr6	41370236	41370538	(129435441)	+	AluSx1	SINE/Alu	2	298	(14)	3381021
339	27.6	21.6	3.3	chr6	41370539	41370998	(129434981)	+	L2a	LINE/L2	2847	3426	(0)	3381019
11	16.4	5.9	0.0	chr6	41413253	41413286	(129392693)	+	(CCCACTT)n	Simple_repeat	1	36	(0)	3381098
20	21.2	2.8	4.1	chr6	41443482	41443552	(129362427)	+	G-rich	Low_complexity	1	73	(0)	3381167
433	33.2	3.7	2.6	chr6	41583911	41584099	(129221880)	C	MIR3	SINE/MIR	(7)	201	11	3381432
249	30.6	8.8	3.9	chr6	41584248	41584451	(129221528)	+	MamSINE1	SINE/tRNA-RTE	73	287	(3)	3381433
745	25.7	6.8	1.0	chr6	41584462	41584669	(129221310)	C	MIR	SINE/MIR	(1)	261	41	3381434
341	31.9	2.7	0.7	chr6	41634984	41635129	(129170850)	+	MIR3	SINE/MIR	20	174	(56)	3381530
268	21.1	20.6	0.9	chr6	41732629	41732733	(129073246)	C	MIR	SINE/MIR	(6)	256	126	3381710
2243	8.2	0.7	0.4	chr6	41965059	41965366	(128840613)	C	AluSq	SINE/Alu	(0)	313	2	3382196
232	27.6	6.5	1.3	chr6	41965372	41965470	(128840509)	C	MIRb	SINE/MIR	(155)	113	1	3382197
13	20.7	4.3	2.1	chr6	41967295	41967340	(128838639)	+	(AATG)n	Simple_repeat	1	48	(0)	3382203
382	24.8	16.1	0.7	chr6	41967378	41967512	(128838467)	+	MIRb	SINE/MIR	31	185	(23)	3382204
364	33.3	4.8	3.0	chr6	42194059	42194222	(128611757)	C	L3	LINE/CR1	(19)	4080	3914	3382763
22	30.6	6.1	0.7	chr6	42194387	42194517	(128611462)	+	GA-rich	Low_complexity	1	139	(0)	3382764
526	28.0	15.3	2.5	chr6	42296429	42296626	(128509353)	C	MIRb	SINE/MIR	(7)	261	34	3382955
15	18.3	4.7	6.0	chr6	42296705	42296768	(128509211)	+	G-rich	Low_complexity	1	67	(0)	3382956
14	16.6	2.3	4.4	chr6	42984625	42984668	(127821311)	+	(AGCCGG)n	Simple_repeat	1	45	(0)	3384478
245	35.8	0.0	2.1	chr6	43054011	43054107	(127751872)	C	MIR3	SINE/MIR	(17)	191	97	3384600
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
14	27.2	2.0	0.0	chr6	43510376	43510424	(127295555)	+	(CGGCCC)n	Simple_repeat	1	50	(0)	3385490
502	29.0	8.0	5.2	chr6	43635317	43635607	(127170372)	+	L2b	LINE/L2	3076	3375	(0)	3385717
325	24.4	11.8	3.8	chr6	43934812	43934943	(126871036)	C	MIR	SINE/MIR	(111)	151	8	3386282
13	5.5	6.7	8.3	chr6	43935037	43935081	(126870898)	+	G-rich	Low_complexity	1	48	(0)	3386283
16	14.8	0.0	4.9	chr6	44002458	44002498	(126803481)	+	(CCCCG)n	Simple_repeat	1	41	(0)	3386394
30	0.0	0.0	0.0	chr6	44002767	44002794	(126803185)	+	(GCG)n	Simple_repeat	1	28	(0)	3386395
270	30.6	8.6	4.0	chr6	44238177	44238322	(126567657)	+	MIRc	SINE/MIR	75	222	(46)	3386833
273	25.2	8.6	5.2	chr6	44238317	44238450	(126567529)	C	MIRb	SINE/MIR	(23)	245	107	3386834
197	40.6	0.9	0.0	chr6	44268798	44268903	(126537076)	+	L3b	LINE/CR1	4974	5080	(152)	3386876
447	25.7	0.9	0.0	chr6	44355567	44355675	(126450304)	C	L1ME4a	LINE/L1	(396)	5728	5619	3387027
418	24.4	12.4	1.6	chr6	44355677	44355805	(126450174)	C	MamGypLTR3a	LTR/Gypsy	(836)	145	1	3387033
525	33.6	9.2	3.6	chr6	44356006	44356369	(126449610)	+	L2	LINE/L2	2339	2729	(690)	3387034
180	31.9	8.1	4.2	chr6	44701925	44702019	(126103960)	+	MIR3	SINE/MIR	40	138	(70)	3387649
39	4.6	0.0	0.0	chr6	45422750	45422794	(125383185)	+	(GGC)n	Simple_repeat	1	45	(0)	3388619
343	30.3	5.5	13.8	chr6	46382982	46383168	(124422811)	C	L2c	LINE/L2	(39)	3348	3175	3390107
47	0.0	0.0	0.0	chr6	46383169	46383208	(124422771)	+	(GT)n	Simple_repeat	1	40	(0)	3390108
343	30.3	5.5	13.8	chr6	46383209	46383376	(124422603)	C	L2c	LINE/L2	(213)	3174	3024	3390107
217	32.3	0.0	0.0	chr6	50952864	50952925	(119853054)	+	L2a	LINE/L2	3359	3420	(6)	3396375
930	29.9	9.0	7.6	chr6	51927259	51927862	(118878117)	+	LTR78B	LTR/ERV1	3	615	(681)	3397734
13	31.9	1.7	0.0	chr6	52421070	52421127	(118384852)	+	(TCTTTCT)n	Simple_repeat	1	59	(0)	3398524
306	26.6	10.6	0.9	chr6	52575179	52575309	(118230670)	C	MIRc	SINE/MIR	(59)	209	55	3398744
3765	17.4	10.7	1.0	chr6	52957964	52958742	(117847237)	C	MER21B	LTR/ERVL	(5)	863	1	3399320
18	0.0	0.0	0.0	chr6	53651400	53651419	(117154560)	+	(A)n	Simple_repeat	1	20	(0)	3400510
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
20	25.2	0.0	7.6	chr6	53795054	53795075	(117010904)	+	(GCG)n	Simple_repeat	53	103	(0)	3400740
291	33.3	12.8	9.8	chr6	56714740	56715085	(114090894)	+	L2a	LINE/L2	3029	3425	(1)	3404496
198	25.0	1.6	3.2	chr6	56715270	56715331	(114090648)	+	L2b	LINE/L2	3313	3373	(2)	3404497
3521	14.4	11.1	0.9	chr6	56715392	56716091	(114089888)	+	LTR48	LTR/ERV1	5	785	(2)	3404498
4707	20.2	2.2	0.8	chr6	57023804	57025627	(113780352)	C	L1M3f	LINE/L1	(3998)	3567	1716	3405015
1658	17.2	1.6	4.3	chr6	57025625	57025952	(113780027)	C	L1M3f	LINE/L1	(5003)	1562	1244	3405015
14	13.6	0.0	5.6	chr6	57089809	57089844	(113716135)	+	(AACCA)n	Simple_repeat	1	36	(0)	3405115
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
23117	9.4	1.1	1.0	chr6	69560164	69566640	(101239339)	+	L1PA7	LINE/L1	1	6463	(6)	3418075
301	29.9	1.0	2.0	chr6	72787441	72787539	(98018440)	C	MER5B	DNA/hAT-Charlie	(29)	149	52	3422336
297	22.7	3.9	0.0	chr6	72787561	72787635	(98018344)	C	MamRep605	LTR?	(333)	516	439	3422337
504	29.6	8.8	0.0	chr6	72787749	72787954	(98018025)	C	MamRep605	LTR?	(570)	279	54	3422337
39	4.7	0.0	0.0	chr6	73263040	73263084	(97542895)	+	(GGC)n	Simple_repeat	1	45	(0)	3423001
507	28.2	11.5	9.0	chr6	73339079	73339568	(97466411)	+	LTR78	LTR/ERV1	1	504	(800)	3423183
351	23.7	3.0	4.0	chr6	73388646	73388746	(97417233)	+	MIRb	SINE/MIR	97	196	(72)	3423313
2278	7.4	0.3	3.9	chr6	73395323	73395634	(97410345)	+	AluSx	SINE/Alu	1	301	(11)	3423329
2516	5.9	0.0	0.0	chr6	75274742	75275027	(95530952)	+	AluYc	SINE/Alu	1	286	(13)	3425975
2098	22.8	7.3	9.9	chr6	75275028	75275754	(95530225)	+	L2a	LINE/L2	2032	2748	(671)	3425974
26	20.2	0.0	0.0	chr6	75284721	75284777	(95521202)	+	(CGCCGC)n	Simple_repeat	1	57	(0)	3425987
22	21.5	3.2	1.5	chr6	75284852	75284927	(95521052)	+	GA-rich	Low_complexity	1	77	(0)	3425988
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
686	20.6	0.0	7.9	chr6	78810304	78810493	(91995486)	C	LTR41C	LTR/ERVL	(526)	175	1	3430419
1075	26.4	6.8	3.4	chr6	79046010	79046538	(91759441)	+	L2a	LINE/L2	2830	3368	(58)	3430721
2095	11.6	3.6	1.0	chr6	79049069	79049361	(91756618)	C	AluSz6	SINE/Alu	(11)	301	1	3430726
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
181	20.7	13.4	0.0	chr6	82784227	82784284	(88021695)	C	OldhAT1	DNA/hAT-Ac	(2181)	667	601	3435622
2429	17.5	0.7	1.2	chr6	82832734	82833011	(87972968)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	1460	3435684
4024	13.4	13.5	0.3	chr6	82833012	82833722	(87972257)	C	LTR8B	LTR/ERV1	(0)	820	1	3435685
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
16	7.8	0.0	3.5	chr6	84033787	84033815	(86772164)	+	(GGC)n	Simple_repeat	1	29	(0)	3437334
1053	20.0	6.6	0.0	chr6	85449039	85449278	(85356701)	+	L1M4	LINE/L1	4883	5139	(1007)	3439079
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
25	12.7	0.0	6.8	chr6	86937454	86937527	(83868452)	+	(CTC)n	Simple_repeat	1	68	(0)	3440804
18426	13.9	2.6	3.9	chr6	87450619	87451800	(83354179)	+	L1MA3	LINE/L1	15	1308	(6257)	3441581
2213	7.7	1.0	1.7	chr6	89820075	89820374	(80985605)	+	AluSz	SINE/Alu	1	298	(14)	3445427
8792	19.2	1.2	0.7	chr6	95365231	95366874	(75439105)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	3452375
534	28.1	10.8	2.5	chr6	99318646	99318849	(71487130)	C	MIRb	SINE/MIR	(6)	262	40	3457423
238	35.0	10.3	4.1	chr6	100326842	100327160	(70478819)	+	L2c	LINE/L2	780	1120	(2299)	3458873
53	0.0	0.0	0.0	chr6	100327275	100327319	(70478660)	+	(CA)n	Simple_repeat	1	45	(0)	3458874
326	27.4	8.2	2.7	chr6	100392965	100393114	(70412865)	+	MER20	DNA/hAT-Charlie	61	219	(0)	3458954
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
19183	9.6	1.8	2.5	chr6	101258312	101261036	(69544943)	+	Charlie3	DNA/hAT-Charlie	1	2706	(0)	3460065
1551	23.8	3.4	6.3	chr6	101261037	101261285	(69544694)	+	L1ME1	LINE/L1	6123	6350	(2)	3460062
6936	20.9	10.7	1.8	chr6	103183597	103185188	(67620791)	+	MER52A	LTR/ERV1	2	1753	(2)	3462428
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
734	27.8	8.6	1.4	chr6	105982004	105982218	(64823761)	+	MIR	SINE/MIR	23	254	(8)	3466217
1694	25.1	12.2	4.0	chr6	105984109	105984982	(64820997)	C	L2a	LINE/L2	(12)	3414	2437	3466222
319	30.1	3.7	0.0	chr6	106575709	106575811	(64230168)	C	MIR3	SINE/MIR	(62)	146	40	3467143
524	21.4	4.5	0.0	chr6	107295240	107295365	(63510614)	C	Charlie4a	DNA/hAT-Charlie	(5)	503	372	3468623
256	20.9	2.9	0.0	chr6	107295361	107295427	(63510552)	C	Charlie4a	DNA/hAT-Charlie	(423)	85	17	3468623
526	29.4	10.9	1.0	chr6	107295495	107295700	(63510279)	C	MIRb	SINE/MIR	(33)	235	7	3468624
906	25.4	1.7	5.3	chr6	107509426	107509463	(63296516)	+	MIRb	SINE/MIR	210	236	(32)	3468982
189	34.6	11.9	0.8	chr6	107509667	107509800	(63296179)	C	L2	LINE/L2	(1078)	2341	2191	3468984
860	17.6	0.0	0.0	chr6	107973553	107973688	(62832291)	C	FLAM_C	SINE/Alu	(7)	136	1	3469692
12	15.4	5.3	2.5	chr6	107973804	107973841	(62832138)	+	GA-rich	Low_complexity	1	40	(0)	3469693
1803	16.2	0.0	3.9	chr6	107973935	107974243	(62831736)	C	AluJb	SINE/Alu	(15)	297	1	3469694
18	23.2	5.7	0.0	chr6	108171367	108171419	(62634560)	+	(TC)n	Simple_repeat	1	56	(0)	3470085
260	28.3	11.5	2.8	chr6	108176209	108176350	(62629629)	+	MIR3	SINE/MIR	24	179	(29)	3470086
2336	19.8	5.6	0.8	chr6	109304290	109304783	(61501196)	C	LTR53	LTR/ERVL	(0)	519	1	3471962
356	24.4	5.8	10.0	chr6	109304784	109304861	(61501118)	C	MamGypLTR2c	LTR/Gypsy	(220)	848	777	3471961
19	29.1	0.0	3.8	chr6	110101989	110102068	(60703911)	+	(GGAGGT)n	Simple_repeat	1	80	(0)	3473167
380	28.8	10.9	2.5	chr6	110237008	110237249	(60568730)	C	L1MEd	LINE/L1	(6516)	570	306	3473343
29	31.6	2.7	0.0	chr6	110237443	110237451	(60568528)	+	(ACAT)n	Simple_repeat	1	46	(67)	3473346
26	35.8	1.1	0.0	chr6	110237452	110237542	(60568437)	+	(CA)n	Simple_repeat	1	92	(0)	3473347
2117	9.1	7.1	0.6	chr6	111290630	111290972	(59515007)	C	THE1B-int	LTR/ERVL-MaLR	(1213)	367	1	3475355
2161	11.4	3.9	4.1	chr6	111290973	111291337	(59514642)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3475355
348	28.1	4.7	0.0	chr6	111550408	111550528	(59255451)	C	Tigger15a	DNA/TcMar-Tigger	(158)	557	431	3475816
12	9.1	4.2	0.0	chr6	111552635	111552658	(59253321)	+	(CTCC)n	Simple_repeat	1	25	(0)	3475817
511	30.7	3.5	2.1	chr6	111663474	111663710	(59142269)	C	X7C_LINE	LINE/CR1	(30)	206	2	3476027
356	21.9	3.5	12.7	chr6	111663923	111664079	(59141900)	+	MER46C	DNA/TcMar-Tigger	2	143	(195)	3476028
5112	12.4	0.7	0.8	chr6	112428958	112429712	(58376267)	C	L1M1	LINE/L1	(5205)	2360	1607	3477100
2374	24.9	5.2	8.0	chr6	112594146	112595129	(58210850)	C	L1MEg	LINE/L1	(5093)	1322	368	3477318
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
1932	19.7	10.0	2.9	chr6	114086174	114086691	(56719288)	+	MLT1E2	LTR/ERVL-MaLR	69	627	(0)	3479620
325	32.2	7.3	2.6	chr6	116363958	116364113	(54441866)	+	MIR3	SINE/MIR	14	177	(31)	3482471
301	34.0	15.8	2.1	chr6	116633985	116634224	(54171755)	C	L2	LINE/L2	(433)	2986	2708	3482855
24	17.9	5.4	2.6	chr6	118893924	118893997	(51911982)	+	(CCG)n	Simple_repeat	1	78	(0)	3485824
502	32.1	6.2	3.7	chr6	119209950	119210327	(51595652)	+	L4_C_Mam	LINE/RTE-X	2265	2652	(2486)	3486291
12	28.0	0.0	0.0	chr6	119348985	119349023	(51456956)	+	(GCC)n	Simple_repeat	1	39	(0)	3486495
19852	9.7	2.2	3.4	chr6	122840217	122843243	(47962736)	+	HERVH-int	LTR/ERV1	6	2995	(4718)	3490949
6670	24.1	5.7	2.8	chr6	122870567	122871118	(47934861)	+	MSTD-int	LTR/ERVL-MaLR	2	578	(1157)	3490993
3357	9.5	2.4	0.7	chr6	122871119	122871563	(47934416)	C	MLT2A2	LTR/ERVL	(0)	453	1	3490994
292	36.3	1.4	4.6	chr6	125729905	125730057	(45075922)	C	MIRc	SINE/MIR	(119)	149	2	3494736
2189	24.7	13.2	7.4	chr6	125730103	125731248	(45074731)	+	Arthur1B	DNA/hAT-Tip100	1	1222	(3)	3494737
1497	25.1	2.5	2.3	chr6	127179588	127179979	(43626000)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	113	3496538
240	30.4	10.1	10.1	chr6	130632989	130633274	(40172705)	+	L2c	LINE/L2	3101	3386	(1)	3501176
355	36.2	3.0	6.9	chr6	130854027	130854346	(39951633)	+	L2b	LINE/L2	3089	3387	(0)	3501480
1734	29.6	10.3	5.9	chr6	131308358	131308906	(39497073)	+	L1MEf	LINE/L1	63	644	(5756)	3502145
1865	12.6	9.2	3.9	chr6	131308907	131309192	(39496787)	C	AluSz	SINE/Alu	(9)	303	1	3502146
882	15.4	0.0	2.9	chr6	131456824	131456959	(39349020)	+	AluJo	SINE/Alu	1	132	(180)	3502363
2768	18.5	12.5	1.2	chr6	131806032	131806676	(38999303)	C	LTR9A1	LTR/ERV1	(0)	728	1	3502934
294	30.9	0.9	0.9	chr6	131915739	131915862	(38890117)	+	MER63D	DNA/hAT-Blackjack	1	124	(86)	3503100
1097	12.8	16.1	1.3	chr6	131916002	131916239	(38889740)	+	MSTA	LTR/ERVL-MaLR	1	280	(148)	3503101
2002	14.2	3.9	2.8	chr6	131916245	131916598	(38889381)	+	THE1B	LTR/ERVL-MaLR	7	364	(0)	3503102
267	32.4	4.1	3.5	chr6	134822881	134823024	(35982955)	C	MIR3	SINE/MIR	(30)	178	34	3507513
12	27.1	0.0	0.0	chr6	137044331	137044370	(33761609)	+	(GCACCGC)n	Simple_repeat	1	40	(0)	3510893
375	31.2	3.6	5.6	chr6	137309335	137309531	(33496448)	C	MLT1I	LTR/ERVL-MaLR	(121)	290	98	3511298
249	19.6	0.0	0.0	chr6	137489498	137489553	(33316426)	C	LTR79	LTR/ERVL	(400)	127	72	3511530
5327	12.4	5.3	2.0	chr6	137860054	137860916	(32945063)	+	MER4D	LTR/ERV1	3	895	(8)	3512103
11	18.6	0.0	7.1	chr6	138161813	138161854	(32644125)	+	(GCCCCA)n	Simple_repeat	1	42	(0)	3512560
16	3.5	3.0	5.9	chr6	138161876	138161908	(32644071)	+	(GGCGG)n	Simple_repeat	1	34	(0)	3512561
248	14.6	0.0	0.0	chr6	139981966	139982006	(30823973)	+	LTR91	LTR/ERVL	88	128	(71)	3515502
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
19	16.3	0.0	0.0	chr6	143511562	143511597	(27294382)	+	(GCA)n	Simple_repeat	1	36	(0)	3519988
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
446	31.7	8.8	9.6	chr6	144331952	144332328	(26473651)	+	L2b	LINE/L2	2959	3332	(43)	3521253
413	24.9	9.6	2.6	chr6	144878717	144878947	(25927032)	C	L1ME5	LINE/L1	(8)	6186	5938	3522006
344	31.1	6.9	4.5	chr6	144878986	144879140	(25926839)	+	MIRc	SINE/MIR	27	185	(83)	3522007
18	18.9	4.2	0.0	chr6	145814784	145814831	(24991148)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3523214
54	0.0	0.0	0.0	chr6	146028233	146028278	(24777701)	+	(GT)n	Simple_repeat	1	46	(0)	3523493
3756	12.5	5.3	0.5	chr6	147448150	147448762	(23357217)	+	LTR9B	LTR/ERV1	1	644	(0)	3525418
2703	16.4	8.3	5.7	chr6	147448763	147449269	(23356710)	+	LTR8A	LTR/ERV1	168	673	(54)	3525417
318	17.8	0.0	8.8	chr6	147674608	147674687	(23131292)	+	LTR33B	LTR/ERVL	428	500	(3)	3525736
4284	18.1	3.4	2.4	chr6	148385402	148386208	(22419771)	+	MER21B	LTR/ERVL	1	816	(52)	3526844
14	14.4	1.8	8.9	chr6	148747132	148747186	(22058793)	+	G-rich	Low_complexity	1	56	(0)	3527384
63	0.0	0.0	0.0	chr6	148748400	148748453	(22057526)	+	(TG)n	Simple_repeat	1	54	(0)	3527386
469	28.6	10.4	5.4	chr6	148770224	148770556	(22035423)	C	L2c	LINE/L2	(189)	3198	2827	3527416
19	21.4	0.0	0.0	chr6	150069234	150069278	(20736701)	+	(GCCCC)n	Simple_repeat	1	45	(0)	3529610
20	22.3	4.8	3.4	chr6	150459687	150459770	(20346209)	+	(CTCCT)n	Simple_repeat	1	88	(0)	3530247
2339	11.9	0.3	0.0	chr6	150459794	150460103	(20345876)	+	AluSx1	SINE/Alu	2	312	(0)	3530248
15	14.4	0.0	0.0	chr6	151240357	151240380	(19565599)	+	(T)n	Simple_repeat	1	24	(0)	3531640
789	24.2	2.7	0.6	chr6	152171756	152171934	(18634045)	+	MER58A	DNA/hAT-Charlie	42	224	(0)	3533141
3029	8.9	0.2	1.4	chr6	153442003	153442425	(17363554)	C	MER4A1	LTR/ERV1	(0)	472	55	3534935
8953	10.1	6.1	2.5	chr6	153442459	153442517	(17363462)	C	MER4-int	LTR/ERV1	(2)	6596	6547	3534935
1269	20.2	3.4	2.3	chr6	156636986	156637249	(14168730)	+	L1MDa	LINE/L1	33	299	(6334)	3539743
363	31.3	0.0	8.8	chr6	156637548	156637729	(14168250)	+	LTR91	LTR/ERVL	34	199	(0)	3539744
193	25.8	17.9	1.3	chr6	156688151	156688303	(14117676)	+	L2b	LINE/L2	3174	3357	(18)	3539816
20	20.5	3.6	0.0	chr6	156777192	156777247	(14028732)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	3539992
45	14.1	0.0	1.2	chr6	156778169	156778248	(14027731)	+	(CCA)n	Simple_repeat	1	80	(0)	3539995
49	3.9	0.0	0.0	chr6	156778269	156778321	(14027658)	+	(CAG)n	Simple_repeat	1	53	(0)	3539996
17	8.0	0.0	0.0	chr6	157240914	157240940	(13565039)	+	(GGGA)n	Simple_repeat	1	27	(0)	3540589
13	4.7	0.0	4.2	chr6	157275099	157275122	(13530857)	+	(GGGA)n	Simple_repeat	1	24	(0)	3540654
12	27.6	3.9	0.0	chr6	157275184	157275235	(13530744)	+	(GAGGCGG)n	Simple_repeat	1	54	(0)	3540655
769	26.2	11.9	11.1	chr6	157275258	157275528	(13530451)	C	MLT1C	LTR/ERVL-MaLR	(38)	429	125	3540656
223	36.8	0.0	1.4	chr6	157303153	157303221	(13502758)	+	L2b	LINE/L2	3291	3358	(17)	3540692
985	21.1	4.6	0.4	chr6	157479084	157479312	(13326667)	+	MIR	SINE/MIR	2	240	(22)	3540980
2078	19.7	12.4	3.6	chr6	157525466	157525699	(13280280)	C	MLT1F2	LTR/ERVL-MaLR	(306)	254	4	3541053
286	26.4	8.4	0.0	chr6	158822752	158822838	(11983141)	C	MER5A	DNA/hAT-Charlie	(94)	95	1	3543176
33	0.0	0.0	0.0	chr6	159727375	159727405	(11078574)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	3544510
22	22.7	3.4	4.3	chr6	159727409	159727497	(11078482)	+	(GGCGC)n	Simple_repeat	1	92	(0)	3544511
1242	29.2	2.0	4.2	chr6	160198168	160198685	(10607294)	+	L1ME1	LINE/L1	5271	5779	(464)	3545171
371	25.3	13.1	1.2	chr6	160198888	160199055	(10606924)	+	LTR16E1	LTR/ERVL	292	482	(56)	3545178
3446	16.4	3.5	4.6	chr6	160296600	160297301	(10508678)	C	L1MA9	LINE/L1	(0)	6312	5619	3545284
13	16.5	0.0	5.3	chr6	160297554	160297591	(10508388)	+	(CTGCAGG)n	Simple_repeat	1	38	(0)	3545285
25	24.0	1.0	6.0	chr6	160991941	160991956	(9814023)	+	(GCC)n	Simple_repeat	1	25	(75)	3546055
12	18.8	2.6	2.6	chr6	160991957	160991994	(9813985)	+	(TCCCGCC)n	Simple_repeat	1	39	(0)	3546056
25	24.0	1.0	6.0	chr6	160991995	160992039	(9813940)	+	(GCC)n	Simple_repeat	26	100	(0)	3546055
355	29.2	10.6	1.2	chr6	161186982	161187171	(9618808)	+	MIR	SINE/MIR	20	225	(43)	3546303
4397	17.9	3.9	6.0	chr6	161353077	161353998	(9451981)	+	MER21A	LTR/ERVL	11	912	(19)	3546553
1162	22.8	7.4	1.2	chr6	165843390	165843731	(4962248)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3552454
54	7.0	1.3	1.3	chr6	165986501	165986577	(4819402)	+	(CT)n	Simple_repeat	1	78	(0)	3552637
36	4.9	0.0	0.0	chr6	166168161	166168203	(4637776)	+	(CGCCCCAGCC)n	Simple_repeat	1	43	(0)	3552880
551	21.8	26.6	1.9	chr6	166323706	166323859	(4482120)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	45	3553108
1245	11.7	0.0	0.0	chr6	166323860	166324022	(4481957)	+	AluSz6	SINE/Alu	137	299	(13)	3553109
525	24.7	9.7	2.4	chr6	166611575	166611773	(4194206)	C	MLT1K	LTR/ERVL-MaLR	(34)	576	363	3553448
3291	19.4	6.2	5.1	chr6	166988471	166989237	(3816742)	C	LTR19C	LTR/ERV1	(0)	779	4	3553874
4734	15.2	3.1	0.3	chr6	167282647	167283521	(3522458)	C	MER4D1	LTR/ERV1	(0)	900	1	3554246
13	16.7	4.8	2.3	chr6	167317295	167317336	(3488643)	+	(TCCAT)n	Simple_repeat	1	44	(0)	3554281
2709	17.9	2.4	12.2	chr6	168179575	168180286	(2625693)	C	MER39B	LTR/ERV1	(13)	640	1	3555226
18	12.2	0.0	0.0	chr6	168274079	168274105	(2531874)	+	(G)n	Simple_repeat	1	27	(0)	3555325
1851	19.3	7.3	1.9	chr6	169019731	169020104	(1785875)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3556056
858	19.7	4.0	4.3	chr6	169502407	169502682	(1303297)	C	MLT1D	LTR/ERVL-MaLR	(8)	497	223	3556516
48	5.3	3.6	3.5	chr6	170054097	170054210	(751769)	+	(AAAAAT)n	Simple_repeat	1	114	(0)	3557102
16	0.0	0.0	0.0	chr6	170266511	170266528	(539451)	+	(T)n	Simple_repeat	1	18	(0)	3557274
13	18.9	0.0	0.0	chr6	170286977	170287006	(518973)	+	G-rich	Low_complexity	1	30	(0)	3557297
31	33.6	1.5	0.0	chr7	82048	82177	(159263796)	+	(CACACC)n	Simple_repeat	1	132	(0)	3557945
30	4.9	0.0	4.3	chr7	190160	190206	(159155767)	+	(TCTGTGTGTA)n	Simple_repeat	1	47	(0)	3558054
12	21.1	2.5	2.4	chr7	452354	452393	(158893580)	+	G-rich	Low_complexity	1	41	(0)	3558365
282	36.4	4.7	2.7	chr7	452577	452723	(158893250)	+	MIRb	SINE/MIR	49	198	(70)	3558366
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
2204	11.4	0.0	0.0	chr7	875748	876046	(158469927)	C	AluSx1	SINE/Alu	(13)	299	1	3559023
13	20.9	3.8	3.6	chr7	1246420	1246472	(158099501)	+	G-rich	Low_complexity	1	55	(0)	3559573
361	16.0	5.7	2.9	chr7	1425707	1425809	(157920164)	+	MLT1J	LTR/ERVL-MaLR	71	176	(336)	3559897
25	26.3	2.5	5.7	chr7	1434454	1434574	(157911399)	+	G-rich	Low_complexity	1	124	(0)	3559912
283	27.1	11.1	0.0	chr7	1455720	1455815	(157890158)	+	L3b	LINE/CR1	4940	5047	(185)	3559936
226	22.2	0.0	0.0	chr7	1460833	1460877	(157885096)	+	L3	LINE/CR1	3948	3992	(107)	3559944
14	15.0	5.4	0.0	chr7	1531665	1531701	(157814272)	+	(CTGTGT)n	Simple_repeat	1	39	(0)	3560054
652	13.9	0.2	0.1	chr7	2353794	2353900	(156992073)	C	FLAM_C	SINE/Alu	(30)	103	10	3561251
12	21.7	0.0	6.2	chr7	2523762	2523809	(156822164)	+	G-rich	Low_complexity	1	48	(0)	3561578
1458	18.5	0.3	6.9	chr7	2555962	2556106	(156789867)	+	AluJb	SINE/Alu	7	133	(179)	3561629
2213	8.3	0.0	5.1	chr7	2556107	2556420	(156789553)	+	AluSg	SINE/Alu	1	298	(12)	3561630
1953	13.8	0.3	1.9	chr7	2558582	2558892	(156787081)	C	AluJr	SINE/Alu	(6)	306	1	3561637
12	20.0	0.0	2.8	chr7	2760672	2760707	(156585266)	+	(CTCCAT)n	Simple_repeat	1	36	(0)	3561953
1848	12.2	0.0	0.0	chr7	2871029	2871298	(156474675)	+	AluSx	SINE/Alu	2	271	(41)	3562181
189	7.9	2.6	2.6	chr7	2871337	2871375	(156474598)	C	L2c	LINE/L2	(224)	3163	3125	3562182
1440	20.1	3.5	1.3	chr7	4039991	4040415	(155305558)	C	LTR45B	LTR/ERV1	(0)	489	19	3564170
4229	12.2	9.1	0.3	chr7	4040416	4041079	(155304894)	C	LTR9A1	LTR/ERV1	(0)	728	1	3564171
15	17.2	1.4	10.8	chr7	4641731	4641803	(154704170)	+	(CCCTG)n	Simple_repeat	1	74	(0)	3565271
15	13.1	2.0	8.0	chr7	4682138	4682186	(154663787)	+	G-rich	Low_complexity	1	50	(0)	3565384
2477	9.0	0.3	0.0	chr7	4708783	4709093	(154636880)	+	AluSx	SINE/Alu	1	312	(0)	3565439
2674	11.1	0.0	0.3	chr7	4829570	4829930	(154516043)	+	THE1B	LTR/ERVL-MaLR	3	362	(2)	3565612
2296	8.1	1.9	2.3	chr7	5189692	5190001	(154155972)	C	AluSx	SINE/Alu	(3)	309	1	3566483
16	12.5	0.0	3.5	chr7	5419455	5419483	(153926490)	+	(AC)n	Simple_repeat	1	29	(0)	3566991
28	0.0	0.0	0.0	chr7	5428728	5428754	(153917219)	+	(T)n	Simple_repeat	1	27	(0)	3567006
2455	8.6	0.0	0.0	chr7	5450168	5450471	(153895502)	+	AluSz	SINE/Alu	1	304	(8)	3567061
797	15.9	0.0	8.3	chr7	5450472	5450507	(153895466)	C	AluJr4	SINE/Alu	(279)	33	1	3567060
190	10.3	0.0	0.0	chr7	5450555	5450583	(153895390)	C	MIR3	SINE/MIR	(66)	142	114	3567062
956	27.4	5.9	4.9	chr7	5466243	5466713	(153879260)	C	MLT1D	LTR/ERVL-MaLR	(29)	476	1	3567107
2416	4.2	1.7	1.0	chr7	5542093	5542381	(153803592)	C	AluYm1	SINE/Alu	(20)	291	1	3567286
212	36.8	6.8	4.2	chr7	5552687	5552795	(153793178)	+	MIR	SINE/MIR	146	261	(1)	3567317
2260	5.6	0.0	0.0	chr7	5553054	5553320	(153792653)	C	AluY	SINE/Alu	(22)	289	23	3567320
2539	4.2	0.3	2.6	chr7	6104073	6104380	(153241593)	C	AluSx3	SINE/Alu	(10)	301	1	3568622
1421	16.9	1.0	10.8	chr7	6104381	6104411	(153241562)	+	AluJo	SINE/Alu	271	300	(12)	3568621
2041	8.6	3.0	0.7	chr7	6440111	6440401	(152905572)	+	AluSp	SINE/Alu	2	299	(14)	3569372
1570	12.8	9.5	0.4	chr7	6440615	6440872	(152905101)	+	AluSg	SINE/Alu	1	284	(26)	3569373
255	33.3	0.8	4.1	chr7	6447537	6447658	(152898315)	+	MIR	SINE/MIR	109	226	(36)	3569390
28	14.8	5.8	1.4	chr7	6484058	6484126	(152861847)	+	(GGC)n	Simple_repeat	1	73	(0)	3569479
1798	15.9	0.0	5.4	chr7	6484471	6484766	(152861207)	+	AluJo	SINE/Alu	1	282	(30)	3569480
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
761	30.2	6.3	3.2	chr7	7386351	7386781	(151959192)	+	L1MCc	LINE/L1	37	481	(5942)	3571028
2075	17.2	1.4	0.3	chr7	7386798	7387152	(151958821)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	6	3571029
459	21.3	2.4	0.0	chr7	8220693	8220814	(151125159)	C	MER5A1	DNA/hAT-Charlie	(0)	166	42	3572220
230	27.1	0.0	6.7	chr7	8220865	8220939	(151125034)	C	MamSINE1	SINE/tRNA-RTE	(202)	88	19	3572221
3819	10.2	18.3	0.3	chr7	12328988	12329746	(147016227)	C	MER4D1	LTR/ERV1	(0)	900	1	3577256
3234	12.8	3.6	5.2	chr7	12820764	12821402	(146524571)	+	MER4B	LTR/ERV1	1	894	(6)	3577911
1700	12.4	5.6	8.3	chr7	16035906	16036137	(143309836)	+	MER61A	LTR/ERV1	1	249	(92)	3582008
2001	10.6	1.4	1.1	chr7	16036138	16036411	(143309562)	+	AluSc8	SINE/Alu	1	275	(36)	3582009
612	15.6	7.5	10.1	chr7	16587641	16587746	(142758227)	+	AluJr	SINE/Alu	81	173	(139)	3582681
3133	19.1	2.3	0.3	chr7	16587747	16588378	(142757595)	C	LTR9D	LTR/ERV1	(0)	645	1	3582682
13	21.9	2.3	2.2	chr7	16646094	16646137	(142699836)	+	G-rich	Low_complexity	1	45	(0)	3582782
32	3.0	0.0	0.0	chr7	16646203	16646236	(142699737)	+	(CTG)n	Simple_repeat	1	34	(0)	3582783
2307	19.8	7.3	9.8	chr7	17613160	17613865	(141732108)	C	L1M3e	LINE/L1	(4988)	2042	1356	3584121
1457	17.9	0.7	2.1	chr7	17613885	17614163	(141731810)	C	L1M3e	LINE/L1	(6754)	276	2	3584121
17181	16.2	2.2	1.6	chr7	19981882	19984901	(139361072)	C	L1MA1	LINE/L1	(4511)	3054	15	3587124
5553	10.2	1.9	1.5	chr7	20123991	20124840	(139221133)	+	HERVH-int	LTR/ERV1	3140	3992	(3721)	3587313
11	21.2	6.8	0.0	chr7	20784367	20784410	(138561563)	+	(CGCTGT)n	Simple_repeat	1	47	(0)	3588256
22	12.6	2.2	2.2	chr7	20784401	20784445	(138561528)	+	(GCC)n	Simple_repeat	1	46	(0)	3588257
3945	13.7	10.9	3.6	chr7	21137692	21138542	(138207431)	+	Ricksha_a	DNA/MULE-MuDR	262	1181	(0)	3588770
332	34.1	0.0	2.9	chr7	21138557	21138695	(138207278)	C	MIRb	SINE/MIR	(123)	145	11	3588771
223	36.0	7.3	6.1	chr7	21138707	21138854	(138207119)	+	MIR3	SINE/MIR	43	192	(16)	3588772
915	32.5	5.4	2.0	chr7	21261615	21262004	(138083969)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	7	3588946
217	26.7	12.1	0.8	chr7	22109682	22109798	(137236175)	C	L2c	LINE/L2	(200)	3187	3056	3590224
11621	8.5	1.2	2.7	chr7	22341406	22343009	(137002964)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3590504
2073	14.4	7.5	1.5	chr7	22343010	22343346	(137002627)	C	THE1B	LTR/ERVL-MaLR	(0)	364	6	3590504
3206	12.2	8.0	2.8	chr7	22602359	22602720	(136743253)	C	MER1A	DNA/hAT-Charlie	(0)	529	151	3590920
2363	18.7	2.8	7.7	chr7	22628921	22629452	(136716521)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3590969
11002	7.7	9.1	0.1	chr7	23192855	23194291	(136151682)	C	LTR12C	LTR/ERV1	(0)	1579	2	3591878
270	33.3	1.5	0.0	chr7	23247890	23248021	(136097952)	C	MIR	SINE/MIR	(79)	183	50	3591985
537	15.5	0.0	0.0	chr7	23422331	23422401	(135923572)	+	AluJr	SINE/Alu	8	78	(234)	3592304
1015	18.8	0.0	0.0	chr7	23422402	23422555	(135923418)	+	AluJr4	SINE/Alu	130	283	(29)	3592305
15	16.6	2.3	4.4	chr7	23470377	23470420	(135875553)	+	GA-rich	Low_complexity	1	45	(0)	3592400
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
212	22.7	1.8	1.6	chr7	23486136	23486208	(135859765)	+	MIR3	SINE/MIR	85	161	(107)	3592416
336	31.6	5.1	6.1	chr7	24259418	24259737	(135086236)	+	LTR16E1	LTR/ERVL	148	459	(30)	3593594
3987	25.4	7.7	2.9	chr7	24259749	24260736	(135085237)	+	L1MEg	LINE/L1	3384	4437	(2800)	3593593
227	25.1	7.7	0.7	chr7	24285480	24285581	(135060392)	+	L2a	LINE/L2	3262	3413	(13)	3593623
3536	8.2	0.4	0.0	chr7	24725420	24725880	(134620093)	C	LTR2	LTR/ERV1	(0)	463	1	3594292
1794	19.3	15.1	0.2	chr7	25569161	25569406	(133776567)	C	MER44B	DNA/TcMar-Tigger	(0)	550	245	3595632
1032	26.0	20.2	0.4	chr7	25759773	25760310	(133585663)	C	LTR16D	LTR/ERVL	(4)	647	1	3595886
14	30.1	0.0	3.3	chr7	25862595	25862654	(133483319)	+	GA-rich	Low_complexity	1	60	(0)	3596031
567	29.9	7.2	3.0	chr7	25929662	25929891	(133416082)	+	MIRb	SINE/MIR	14	257	(11)	3596127
282	15.2	0.0	0.0	chr7	26304943	26304988	(133040985)	C	LTR85b	LTR/Gypsy?	(81)	703	658	3596821
464	24.0	0.8	6.7	chr7	28261002	28261135	(131084838)	C	Charlie10a	DNA/hAT-Charlie	(95)	185	60	3599782
505	30.5	7.4	2.1	chr7	28261164	28261354	(131084619)	+	L2b	LINE/L2	2970	3171	(204)	3599783
469	30.4	5.2	4.3	chr7	28408102	28408311	(130937662)	+	MIRc	SINE/MIR	30	241	(27)	3600022
308	28.6	14.6	10.9	chr7	28409963	28410264	(130935709)	+	L1M4b	LINE/L1	223	537	(6330)	3600026
243	13.6	0.0	8.3	chr7	29620507	29620554	(129725419)	C	L1M6	LINE/L1	(5522)	974	931	3601873
5914	18.2	4.6	2.8	chr7	30266144	30267291	(129078682)	C	L1MB4	LINE/L1	(6340)	1177	8	3602886
254	33.0	6.4	3.6	chr7	30267316	30267620	(129078353)	C	L2	LINE/L2	(2423)	996	683	3602892
2271	10.4	0.3	0.7	chr7	30449911	30450209	(128895764)	+	AluSx	SINE/Alu	1	298	(14)	3603142
2233	16.3	5.3	6.6	chr7	30485966	30486477	(128859496)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3603190
13	7.1	6.2	2.9	chr7	30594954	30594985	(128750988)	+	(TGCTGC)n	Simple_repeat	1	34	(0)	3603361
272	35.8	4.2	0.0	chr7	30771107	30771243	(128574730)	C	MIRb	SINE/MIR	(76)	192	50	3603651
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
1086	28.0	4.3	6.1	chr7	31574804	31575210	(127770763)	C	MLT1I	LTR/ERVL-MaLR	(9)	402	4	3604888
2218	10.9	0.0	2.9	chr7	32380233	32380545	(126965428)	C	AluSx3	SINE/Alu	(7)	304	1	3606101
245	28.0	8.4	4.7	chr7	32380546	32380813	(126965160)	+	L2-3_Crp	LINE/L2	726	1004	(1092)	3606102
1315	27.6	11.0	5.3	chr7	32380814	32381938	(126964035)	+	L2a	LINE/L2	2212	3411	(15)	3606100
32	36.8	1.1	2.1	chr7	32495286	32495475	(126850498)	+	(GCCCC)n	Simple_repeat	1	192	(0)	3606331
1612	17.4	8.2	0.0	chr7	33008159	33008428	(126337545)	+	AluJr	SINE/Alu	1	294	(18)	3607190
26	0.0	0.0	0.0	chr7	33109418	33109442	(126236531)	+	(CGG)n	Simple_repeat	1	25	(0)	3607378
344	13.1	12.8	0.0	chr7	33109717	33109777	(126236196)	C	Ricksha_0	DNA/MULE-MuDR	(251)	1482	1413	3607379
202	36.3	11.8	0.6	chr7	35025979	35026136	(124319837)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	3610075
695	21.6	2.0	0.7	chr7	35026202	35026350	(124319623)	+	MER5A1	DNA/hAT-Charlie	2	152	(14)	3610076
280	15.9	6.0	0.0	chr7	35026353	35026415	(124319558)	C	MER5B	DNA/hAT-Charlie	(0)	178	112	3610077
405	26.6	8.3	2.0	chr7	35026456	35026601	(124319372)	C	MER5A	DNA/hAT-Charlie	(33)	156	1	3610078
286	32.8	4.2	0.9	chr7	35261409	35261522	(124084451)	+	MIR	SINE/MIR	27	144	(118)	3610393
2045	22.6	10.1	1.6	chr7	35701272	35701770	(123644203)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	3	3611067
556	21.2	0.8	0.8	chr7	36085057	36085175	(123260798)	C	MER5A1	DNA/hAT-Charlie	(21)	145	27	3611713
339	26.7	8.9	1.8	chr7	36300324	36300457	(123045516)	C	MIRc	SINE/MIR	(82)	186	44	3612072
2106	26.0	10.6	0.2	chr7	36710059	36710667	(122635306)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	3612714
12	21.5	2.5	2.4	chr7	37916454	37916518	(121429455)	+	(GCGCC)n	Simple_repeat	1	65	(0)	3614409
2719	20.5	5.1	0.3	chr7	38069230	38069898	(121276075)	+	L1ME2z	LINE/L1	5737	6439	(5)	3614609
274	30.2	14.4	2.0	chr7	39043996	39044147	(120301826)	+	MER5B	DNA/hAT-Charlie	1	174	(4)	3615987
924	26.5	9.1	4.4	chr7	39329502	39329844	(120016129)	+	LTR16A2	LTR/ERVL	133	493	(2)	3616375
255	30.4	1.2	0.0	chr7	39329846	39329924	(120016049)	+	MIR	SINE/MIR	157	236	(26)	3616376
645	20.6	8.1	1.8	chr7	39745570	39745732	(119600241)	C	MER5A	DNA/hAT-Charlie	(13)	176	3	3617067
401	30.5	4.8	1.1	chr7	40570333	40570511	(118775462)	C	L2c	LINE/L2	(265)	3122	2937	3618653
364	29.7	5.7	7.4	chr7	40570528	40570796	(118775177)	C	Tigger15a	DNA/TcMar-Tigger	(266)	449	186	3618654
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
19	25.4	4.0	1.3	chr7	42237877	42237952	(117108021)	+	G-rich	Low_complexity	1	79	(0)	3620931
329	33.7	5.5	1.6	chr7	42686139	42686331	(116659642)	C	L2b	LINE/L2	(490)	2929	2729	3621559
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
189	30.4	0.0	1.8	chr7	43748165	43748221	(115597752)	+	X7A_LINE	LINE/CR1	8	63	(204)	3623100
2310	8.5	0.0	0.0	chr7	43748388	43748669	(115597304)	+	AluSx1	SINE/Alu	1	282	(30)	3623101
12	12.8	5.6	2.6	chr7	43758492	43758527	(115587446)	+	(GGCGCCA)n	Simple_repeat	1	38	(0)	3623125
23	15.4	1.9	1.9	chr7	43758557	43758608	(115587365)	+	(CCCTC)n	Simple_repeat	1	53	(0)	3623126
13	32.2	0.0	6.5	chr7	43758609	43758648	(115587325)	+	(CCCCCCG)n	Simple_repeat	1	92	(0)	3623127
13	21.1	7.9	3.7	chr7	43758839	43758878	(115587095)	+	(GGCCCG)n	Simple_repeat	1	81	(0)	3623128
17	12.4	2.9	0.0	chr7	43758879	43758913	(115587060)	+	(GCCCC)n	Simple_repeat	1	36	(0)	3623129
43	21.9	3.2	5.0	chr7	43902045	43902199	(115443774)	+	GA-rich	Low_complexity	1	160	(0)	3623396
15	23.8	2.0	1.9	chr7	43906341	43906391	(115439582)	+	(CCCCCG)n	Simple_repeat	1	52	(0)	3623406
260	34.6	1.6	3.2	chr7	44094267	44094420	(115251553)	+	MIRb	SINE/MIR	59	210	(58)	3623801
246	23.9	7.1	1.1	chr7	44094613	44094705	(115251268)	+	MamGypLTR1c	LTR/Gypsy	697	795	(8)	3623802
1224	24.5	6.3	6.8	chr7	44094755	44094833	(115251140)	+	L1MC5	LINE/L1	8759	8840	(464)	3623803
20	20.5	1.4	5.6	chr7	44276091	44276160	(115069813)	+	G-rich	Low_complexity	1	71	(0)	3624015
16	13.2	4.4	4.3	chr7	44326557	44326601	(115019372)	+	(GCAG)n	Simple_repeat	1	47	(0)	3624065
188	28.8	19.3	0.9	chr7	44885920	44886147	(114459826)	C	L2b	LINE/L2	(180)	3195	2916	3625086
29	28.6	7.5	1.5	chr7	45583107	45583292	(113762681)	+	(TGCATG)n	Simple_repeat	1	200	(0)	3626117
14	14.1	0.0	3.0	chr7	47744424	47744456	(111601517)	+	(GGTGGA)n	Simple_repeat	1	33	(0)	3629012
2329	7.1	0.0	1.4	chr7	47744583	47744878	(111601095)	+	AluSc	SINE/Alu	14	305	(4)	3629013
1612	16.3	12.4	0.6	chr7	48291344	48291764	(111054209)	C	LTR45B	LTR/ERV1	(0)	500	5	3629723
659	30.1	11.2	8.7	chr7	48462809	48463740	(110882233)	C	L1MEj	LINE/L1	(1172)	988	37	3629947
60	16.8	2.1	2.8	chr7	48463745	48463884	(110882089)	+	GA-rich	Low_complexity	1	143	(0)	3629949
193	25.3	0.0	19.4	chr7	48463948	48464055	(110881918)	+	MER5A	DNA/hAT-Charlie	96	182	(7)	3629950
2289	22.3	7.9	12.4	chr7	50988569	50989393	(108356580)	+	MER21C	LTR/ERVL	124	908	(30)	3633059
3135	8.6	6.6	0.0	chr7	54278449	54278889	(105067084)	C	MER4A1	LTR/ERV1	(0)	472	1	3637196
1382	25.3	7.6	2.7	chr7	54278900	54279375	(105066598)	C	MER74A	LTR/ERVL	(46)	512	12	3637197
1125	25.5	8.9	0.9	chr7	64907355	64907718	(94438255)	+	MER21C	LTR/ERVL	452	896	(42)	3646918
21	35.4	2.5	3.2	chr7	66124456	66124560	(93221413)	+	(TTTC)n	Simple_repeat	1	104	(0)	3649295
475	21.0	9.8	0.0	chr7	66124561	66124679	(93221294)	C	FLAM_A	SINE/Alu	(10)	132	1	3649296
21	35.4	2.5	3.2	chr7	66124680	66124695	(93221278)	+	(TTTC)n	Simple_repeat	1	15	(0)	3649297
1044	26.3	12.9	4.6	chr7	66124712	66125250	(93220723)	C	L1MC4	LINE/L1	(119)	7923	7334	3649298
359	24.2	14.3	0.6	chr7	66413115	66413315	(92932658)	C	FLAM_C	SINE/Alu	(2)	300	45	3649935
462	15.1	0.0	0.0	chr7	66493312	66493384	(92852589)	C	AluJr	SINE/Alu	(195)	117	45	3650100
263	28.6	6.7	1.2	chr7	66930483	66930567	(92415406)	C	L2a	LINE/L2	(1337)	2082	1993	3651127
878	18.9	3.6	0.0	chr7	68025250	68025408	(91320565)	C	L1PA17	LINE/L1	(15)	6151	5987	3653563
524	22.8	19.0	3.4	chr7	68025432	68025608	(91320365)	C	LTR16	LTR/ERVL	(227)	211	1	3653564
13	15.2	0.0	9.1	chr7	68347988	68348007	(90997966)	+	(TAT)n	Simple_repeat	1	20	(0)	3654279
2136	11.3	0.3	0.0	chr7	68348008	68348291	(90997682)	C	AluSq	SINE/Alu	(28)	285	1	3654280
105	9.0	3.5	1.1	chr7	68730033	68730208	(90615765)	+	(AAGA)n	Simple_repeat	1	180	(0)	3655087
576	24.6	6.0	2.9	chr7	68730451	68730659	(90615314)	+	MIR	SINE/MIR	47	262	(0)	3655088
1748	20.8	5.3	8.3	chr7	68748785	68749287	(90596686)	+	MLT1D	LTR/ERVL-MaLR	1	487	(18)	3655131
279	16.3	0.0	2.0	chr7	68749328	68749377	(90596596)	C	MIRb	SINE/MIR	(192)	76	28	3655132
320	30.5	9.4	0.7	chr7	69232415	69232569	(90113404)	C	MIRb	SINE/MIR	(0)	268	99	3656198
6469	23.4	4.6	2.4	chr7	70846977	70849655	(88496318)	+	HERVIP10F-int	LTR/ERV1	2608	7737	(0)	3658941
611	22.7	16.6	1.9	chr7	71374405	71374660	(87971313)	C	MLT1H	LTR/ERVL-MaLR	(227)	322	22	3660063
2504	7.9	0.0	0.0	chr7	71374835	71375138	(87970835)	C	AluSx	SINE/Alu	(7)	305	2	3660064
4287	12.3	3.2	8.9	chr7	71458270	71459043	(87886930)	C	LTR1F1	LTR/ERV1	(1)	728	1	3660237
333	28.3	6.0	4.4	chr7	71488466	71488571	(87857402)	C	MER5A	DNA/hAT-Charlie	(1)	188	77	3660302
2263	11.0	0.3	1.0	chr7	71488572	71488881	(87857092)	C	AluSz	SINE/Alu	(4)	308	1	3660303
230	10.0	0.0	0.0	chr7	71989470	71989499	(87356474)	+	L1M6	LINE/L1	141	170	(6326)	3661387
2197	12.5	1.1	4.3	chr7	72185601	72185976	(87159997)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3661778
1918	16.5	15.3	2.5	chr7	72185977	72186297	(87159676)	+	MLT1D	LTR/ERVL-MaLR	130	502	(3)	3661777
14	25.8	2.1	0.0	chr7	72337022	72337068	(87008905)	+	(CCCGCT)n	Simple_repeat	1	48	(0)	3662110
306	24.6	19.8	0.8	chr7	73308961	73309091	(86036882)	C	L1M5	LINE/L1	(601)	5523	5362	3664325
15	0.0	0.0	0.0	chr7	73309092	73309108	(86036865)	+	(AT)n	Simple_repeat	1	17	(0)	3664326
2030	9.9	4.2	0.0	chr7	73309110	73309382	(86036591)	C	AluSx	SINE/Alu	(21)	291	7	3664327
457	25.2	2.3	2.3	chr7	73330699	73330828	(86015145)	C	MER94	DNA/hAT-Blackjack	(0)	134	5	3664373
340	17.6	0.3	0.0	chr7	73427906	73428519	(85917454)	+	(AC)n	Simple_repeat	1	616	(0)	3664610
14	21.7	0.0	8.1	chr7	73557165	73557226	(85788747)	+	G-rich	Low_complexity	1	62	(0)	3664903
35	5.0	1.4	6.8	chr7	73667848	73667919	(85678054)	+	(CGGAG)n	Simple_repeat	1	73	(0)	3665208
13	14.1	10.3	3.1	chr7	73667942	73667999	(85677974)	+	G-rich	Low_complexity	1	64	(0)	3665209
2200	12.6	0.3	0.0	chr7	73839002	73839302	(85506671)	+	AluSx1	SINE/Alu	1	302	(10)	3665600
218	31.8	7.6	5.6	chr7	73890663	73890842	(85455131)	+	L2b	LINE/L2	3181	3364	(11)	3665719
190	25.5	0.0	5.6	chr7	74021722	74021775	(85324198)	+	L2c	LINE/L2	3115	3165	(222)	3666001
12	22.1	0.0	0.0	chr7	74021915	74021946	(85324027)	+	(CCCCAG)n	Simple_repeat	1	32	(0)	3666002
1193	15.1	0.6	0.6	chr7	74279340	74279518	(85066455)	C	AluSz6	SINE/Alu	(10)	302	124	3666660
1097	18.8	0.5	0.0	chr7	74279824	74280025	(85065948)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	3666661
23	6.0	0.0	2.7	chr7	74280042	74280078	(85065895)	+	(CCTCC)n	Simple_repeat	1	37	(0)	3666662
26	6.3	0.0	0.0	chr7	74280079	74280112	(85065861)	+	(CTTT)n	Simple_repeat	1	34	(0)	3666663
235	31.1	13.9	3.6	chr7	74627805	74627971	(84718002)	+	MIRb	SINE/MIR	60	246	(22)	3667595
2449	7.9	0.0	0.3	chr7	75046953	75047256	(84298717)	C	AluSg	SINE/Alu	(7)	303	1	3668648
22	23.2	0.0	0.0	chr7	75639245	75639290	(83706683)	+	G-rich	Low_complexity	1	46	(0)	3670120
36	0.0	0.0	0.0	chr7	75639563	75639593	(83706380)	+	(GT)n	Simple_repeat	1	31	(0)	3670121
333	27.3	4.3	0.0	chr7	75814876	75815007	(83530966)	+	LTR16A2	LTR/ERVL	358	495	(0)	3670605
316	24.4	4.7	1.2	chr7	75879997	75880079	(83465894)	C	MIR	SINE/MIR	(59)	203	118	3670808
295	31.4	11.0	1.4	chr7	75994975	75995113	(83350860)	+	L2	LINE/L2	2704	2857	(562)	3671070
1755	12.7	1.4	6.5	chr7	76178560	76178866	(83167107)	+	AluJo	SINE/Alu	1	291	(21)	3671502
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
288	25.7	2.2	0.0	chr7	76233697	76233800	(83112173)	C	MIR3	SINE/MIR	(71)	137	31	3671657
22	10.4	2.3	2.3	chr7	76234047	76234089	(83111884)	+	(CCTC)n	Simple_repeat	1	44	(0)	3671658
13	7.1	0.0	10.8	chr7	76235025	76235061	(83110912)	+	G-rich	Low_complexity	1	37	(0)	3671661
13	28.4	0.9	8.5	chr7	76235311	76235415	(83110558)	+	G-rich	Low_complexity	1	106	(0)	3671662
289	26.3	9.5	0.9	chr7	76276957	76277071	(83068902)	C	MIRc	SINE/MIR	(115)	153	28	3671764
13	12.0	0.0	3.5	chr7	76279559	76279587	(83066386)	+	G-rich	Low_complexity	1	29	(0)	3671769
596	26.4	7.7	0.0	chr7	76279594	76279786	(83066187)	C	MIR3	SINE/MIR	(4)	204	2	3671770
375	30.1	13.4	2.9	chr7	76291465	76291704	(83054269)	+	L2c	LINE/L2	3115	3383	(4)	3671796
193	27.3	4.7	17.3	chr7	76291604	76291776	(83054197)	+	X9_LINE	LINE/L1	779	928	(8)	3671797
15	24.5	0.0	3.9	chr7	76358446	76358497	(82987476)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	3671937
13	25.0	2.0	2.0	chr7	76397687	76397735	(82948238)	+	(CCCGCAG)n	Simple_repeat	1	50	(0)	3672048
277	22.9	6.0	5.2	chr7	78254918	78255032	(81090941)	C	MIRb	SINE/MIR	(86)	182	67	3675216
32	5.3	0.0	0.0	chr7	79355321	79355359	(79990614)	+	(AAAC)n	Simple_repeat	1	39	(0)	3676665
17	13.4	5.5	5.2	chr7	80134270	80134324	(79211649)	+	GA-rich	Low_complexity	1	58	(0)	3677729
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
15	13.6	0.0	5.6	chr7	91264241	91264276	(68081697)	+	(TCC)n	Simple_repeat	1	36	(0)	3692226
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
1492	24.9	1.7	5.4	chr7	91837286	91837713	(67508260)	C	LTR41B	LTR/ERVL	(0)	758	347	3692953
1812	27.3	1.1	0.4	chr7	91837723	91838175	(67507798)	C	LTR41B	LTR/ERVL	(302)	456	1	3692954
1230	24.0	4.2	3.0	chr7	92403115	92403419	(66942554)	+	LTR40c	LTR/ERVL	155	463	(2)	3693826
287	19.4	8.8	0.0	chr7	92403423	92403484	(66942489)	+	HERVL40-int	LTR/ERVL	1	68	(5462)	3693826
334	26.1	1.7	9.4	chr7	93375550	93375676	(65970297)	+	LTR33A_	LTR/ERVL	52	168	(335)	3695149
1086	23.0	5.0	5.5	chr7	93891216	93891318	(65454655)	C	L1ME2	LINE/L1	(9)	6155	6062	3695844
210	35.0	1.2	0.0	chr7	94004724	94004803	(65341170)	C	MIR3	SINE/MIR	(31)	177	97	3696021
369	32.0	0.8	3.2	chr7	95684461	95684586	(63661387)	+	MIRc	SINE/MIR	44	166	(102)	3698347
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
30	13.9	3.0	2.9	chr7	97024723	97024789	(62321184)	+	GA-rich	Low_complexity	1	69	(0)	3700172
991	17.2	0.0	0.0	chr7	98080660	98080810	(61265163)	C	AluJb	SINE/Alu	(29)	283	133	3701886
14	8.5	0.0	3.7	chr7	98106950	98106976	(61238997)	+	(GGC)n	Simple_repeat	1	27	(0)	3701943
20	20.6	2.0	0.0	chr7	98107089	98107138	(61238835)	+	(CGGA)n	Simple_repeat	1	51	(0)	3701944
180	35.7	1.2	0.0	chr7	99099115	99099198	(60246775)	C	L2c	LINE/L2	(482)	2937	2853	3703954
17	0.0	0.0	0.0	chr7	99099210	99099228	(60246745)	+	(T)n	Simple_repeat	1	19	(0)	3703959
180	32.9	6.4	2.7	chr7	99099328	99099402	(60246571)	+	L2b	LINE/L2	3277	3354	(21)	3703960
295	26.9	1.3	0.0	chr7	99125665	99125742	(60220231)	C	MIR	SINE/MIR	(177)	85	7	3704009
14	12.7	0.0	0.0	chr7	99434982	99435007	(59910966)	+	(CTC)n	Simple_repeat	1	26	(0)	3704725
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
13	29.4	0.0	0.0	chr7	100435798	100435843	(58910130)	+	(GCCCGCC)n	Simple_repeat	1	46	(0)	3706569
19	21.9	7.3	4.2	chr7	100436191	100436300	(58909673)	+	G-rich	Low_complexity	1	118	(0)	3706570
19	32.3	0.0	5.9	chr7	100539598	100539716	(58806257)	+	G-rich	Low_complexity	1	119	(0)	3706845
12	18.3	0.0	3.0	chr7	100603022	100603054	(58742919)	+	(CTCC)n	Simple_repeat	1	33	(0)	3706931
193	20.6	6.8	2.9	chr7	100695815	100695884	(58650089)	+	MIRc	SINE/MIR	183	255	(13)	3707154
1709	15.1	1.0	7.2	chr7	100696216	100696396	(58649577)	C	AluJb	SINE/Alu	(2)	310	139	3707155
217	19.3	13.6	0.0	chr7	100837604	100837660	(58508313)	C	L2a	LINE/L2	(50)	3376	3311	3707491
1329	18.5	5.5	3.7	chr7	100837663	100837812	(58508161)	C	AluJo	SINE/Alu	(15)	297	135	3707492
12	20.2	0.0	6.7	chr7	101154370	101154414	(58191559)	+	G-rich	Low_complexity	1	45	(0)	3708121
16	20.4	0.0	2.8	chr7	101172343	101172378	(58173595)	+	(GC)n	Simple_repeat	1	36	(0)	3708153
1766	13.3	2.0	3.2	chr7	101173721	101174029	(58171944)	C	AluJr	SINE/Alu	(7)	305	1	3708154
15	0.0	0.0	7.4	chr7	101179141	101179167	(58166806)	+	(GGGA)n	Simple_repeat	1	27	(0)	3708164
15	21.5	2.2	2.2	chr7	101180498	101180542	(58165431)	+	(TGG)n	Simple_repeat	1	46	(0)	3708167
190	33.3	0.0	0.0	chr7	101217552	101217611	(58128362)	C	MIR3	SINE/MIR	(49)	159	100	3708258
15	14.5	5.3	0.0	chr7	101237697	101237734	(58108239)	+	(TCAGCC)n	Simple_repeat	1	40	(0)	3708295
1080	26.0	8.8	7.2	chr7	101494426	101494573	(57851400)	C	Charlie4a	DNA/hAT-Charlie	(366)	142	5	3708968
182	25.8	5.8	14.2	chr7	101494582	101494694	(57851279)	+	L2b	LINE/L2	3283	3385	(2)	3708967
210	24.2	5.7	0.0	chr7	101609365	101609430	(57736543)	+	L2	LINE/L2	847	916	(2503)	3709223
1945	7.2	1.1	0.0	chr7	101677297	101677558	(57668415)	+	LTR8	LTR/ERV1	427	691	(0)	3709392
2267	11.6	0.0	0.0	chr7	101738955	101739256	(57606717)	+	AluSz	SINE/Alu	2	303	(9)	3709550
550	29.4	12.7	0.4	chr7	101739322	101739584	(57606389)	C	L2b	LINE/L2	(734)	2685	2386	3709546
36	2.7	0.0	0.0	chr7	101743688	101743725	(57602248)	+	(CCT)n	Simple_repeat	1	38	(0)	3709558
12	8.0	7.4	0.0	chr7	101804380	101804406	(57541567)	+	(TTTC)n	Simple_repeat	1	29	(0)	3709722
79	3.8	0.0	0.0	chr7	101804416	101804496	(57541477)	+	(TG)n	Simple_repeat	1	81	(0)	3709723
13	17.0	0.0	5.4	chr7	101869739	101869775	(57476198)	+	(GCAGG)n	Simple_repeat	1	37	(0)	3709845
361	27.1	18.1	1.7	chr7	101985582	101985761	(57360212)	+	MIR	SINE/MIR	13	228	(34)	3710070
441	31.5	4.9	7.1	chr7	102295583	102295835	(57050138)	C	L2c	LINE/L2	(101)	3286	3040	3710671
2065	14.4	1.5	0.3	chr7	104927431	104927758	(54418215)	C	MER34B	LTR/ERV1	(233)	332	1	3714835
352	31.4	10.6	6.9	chr7	105309808	105310169	(54035804)	C	L2b	LINE/L2	(0)	3375	2999	3715501
2019	11.9	0.0	0.3	chr7	105401388	105401673	(53944300)	C	AluSz	SINE/Alu	(0)	312	28	3715736
602	24.1	17.6	10.9	chr7	105401674	105402123	(53943850)	+	LTR50	LTR/ERVL	89	684	(111)	3715735
3143	10.8	3.5	15.1	chr7	105687791	105688259	(53657714)	+	LTR35A	LTR/ERV1	1	380	(167)	3716383
2069	12.5	0.0	1.6	chr7	105688260	105688563	(53657410)	+	AluJb	SINE/Alu	1	299	(13)	3716384
14	12.0	5.3	2.5	chr7	106030306	106030343	(53315630)	+	(GAGGCCA)n	Simple_repeat	1	40	(0)	3716988
434	25.9	14.4	6.0	chr7	106030431	106030664	(53315309)	+	L2c	LINE/L2	3093	3349	(38)	3716989
22	0.0	0.0	0.0	chr7	106054601	106054624	(53291349)	+	(GT)n	Simple_repeat	1	24	(0)	3717024
2755	12.2	3.5	0.0	chr7	106168437	106168847	(53177126)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	3717212
312	27.9	9.8	7.3	chr7	106285214	106285391	(53060582)	C	L1M4b	LINE/L1	(6487)	380	198	3717380
16871	10.2	1.4	3.1	chr7	106302141	106304954	(53041019)	C	L1P3	LINE/L1	(3661)	2800	1	3717401
239	33.9	3.4	0.0	chr7	107988306	107988420	(51357553)	C	L2	LINE/L2	(994)	2425	2307	3719929
297	30.2	2.5	6.7	chr7	112130049	112130277	(47215696)	C	L2b	LINE/L2	(202)	3173	2953	3725329
19	13.2	1.8	6.9	chr7	116526466	116526522	(42819451)	+	(TCCGCCC)n	Simple_repeat	1	58	(0)	3731165
643	26.9	7.4	1.7	chr7	116857160	116857397	(42488576)	C	MIR	SINE/MIR	(1)	267	19	3731651
416	30.0	4.2	2.4	chr7	116905284	116905447	(42440526)	+	L2c	LINE/L2	2790	2956	(463)	3731734
341	22.6	0.0	10.6	chr7	116905452	116905555	(42440418)	+	MER94	DNA/hAT-Blackjack	36	128	(6)	3731735
11996	10.2	1.7	0.0	chr7	116991661	116993213	(42352760)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3731928
2645	9.7	0.8	0.8	chr7	116993214	116993568	(42352405)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3731928
18657	13.7	4.7	3.2	chr7	117447933	117455447	(41890526)	+	L1MA2	LINE/L1	19	7717	(6)	3732558
2568	10.4	0.3	0.0	chr7	120041477	120041830	(39304143)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3735870
11036	11.1	1.3	0.6	chr7	120041831	120043400	(39302573)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3735870
355	35.8	10.1	5.0	chr7	122771443	122771760	(36574213)	C	L2c	LINE/L2	(6)	3381	3046	3739544
310	32.8	7.6	3.9	chr7	127154285	127154538	(32191435)	+	L2c	LINE/L2	2934	3197	(190)	3745354
30	6.7	0.0	3.9	chr7	128031030	128031080	(31314893)	+	(GGGGA)n	Simple_repeat	1	51	(0)	3746520
182	21.6	0.0	0.0	chr7	128248848	128248884	(31097089)	+	MIRb	SINE/MIR	223	259	(9)	3746882
185	28.2	0.0	0.0	chr7	128248903	128248941	(31097032)	C	MIRb	SINE/MIR	(18)	250	212	3746883
433	11.4	7.9	0.0	chr7	128248950	128249019	(31096954)	C	MADE1	DNA/TcMar-Mariner	(0)	80	5	3746884
14	21.2	7.2	4.5	chr7	128352153	128352235	(30993738)	+	(GCCAG)n	Simple_repeat	1	89	(0)	3747054
902	4.7	0.0	0.0	chr7	128697452	128697558	(30648415)	+	5S	rRNA	15	121	(0)	3747813
445	3.7	0.0	0.0	chr7	128697691	128697744	(30648229)	+	5S	rRNA	3	56	(65)	3747814
388	12.8	2.6	6.6	chr7	128904755	128904845	(30441128)	+	MER91B	DNA/hAT-Tip100	43	127	(63)	3748123
388	20.4	3.3	0.0	chr7	128904876	128904963	(30441010)	+	MER91B	DNA/hAT-Tip100	100	190	(0)	3748124
15	7.5	0.0	6.2	chr7	129041489	129041520	(30304453)	+	(AAGG)n	Simple_repeat	1	32	(0)	3748351
336	24.6	9.2	3.3	chr7	129055449	129055570	(30290403)	C	L2c	LINE/L2	(41)	3346	3217	3748377
20	14.9	0.0	0.0	chr7	129189155	129189220	(30156753)	+	(GCT)n	Simple_repeat	1	66	(0)	3748680
17	29.8	1.5	0.0	chr7	129189247	129189311	(30156662)	+	(GAGCGG)n	Simple_repeat	1	66	(0)	3748681
253	30.5	0.0	5.8	chr7	129190720	129190806	(30155167)	C	MamRep137	DNA/TcMar?	(5)	505	424	3748682
2294	10.0	1.3	1.0	chr7	129213577	129213886	(30132087)	C	AluSx1	SINE/Alu	(0)	312	2	3748731
303	30.2	12.3	4.5	chr7	129561505	129561660	(29784313)	C	HAL1	LINE/L1	(410)	2097	1928	3749405
226	19.4	9.7	1.1	chr7	129561915	129562008	(29783965)	C	LTR79	LTR/ERVL	(337)	190	88	3749407
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
16	15.0	0.0	4.9	chr7	129780249	129780289	(29565684)	+	(CGCCCCG)n	Simple_repeat	1	41	(0)	3749820
353	23.5	2.2	3.3	chr7	129782953	129783081	(29562892)	+	MIRc	SINE/MIR	40	160	(102)	3749822
304	23.3	13.4	1.9	chr7	130490335	130490439	(28855534)	+	L2c	LINE/L2	3002	3120	(267)	3751245
241	26.4	0.9	10.6	chr7	130490496	130490618	(28855355)	C	L2c	LINE/L2	(4)	3383	3273	3751246
26	0.0	0.0	0.0	chr7	131556271	131556295	(27789678)	+	(GGCGAC)n	Simple_repeat	1	25	(0)	3753007
12	17.6	11.7	1.5	chr7	131556299	131556358	(27789615)	+	(GCA)n	Simple_repeat	1	67	(0)	3753008
13	0.0	7.7	3.6	chr7	132234076	132234101	(27111872)	+	(GGAG)n	Simple_repeat	1	28	(0)	3754101
44	0.0	0.0	0.0	chr7	132311157	132311194	(27034779)	+	(TG)n	Simple_repeat	1	38	(0)	3754215
247	37.6	4.8	1.7	chr7	132311278	132311458	(27034515)	+	L2c	LINE/L2	3141	3327	(60)	3754216
364	27.3	7.9	7.4	chr7	132618493	132618694	(26727279)	+	LTR103_Mam	LTR/ERV1?	1	203	(272)	3754665
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
245	29.5	6.6	11.9	chr7	137557588	137557764	(21788209)	+	LTR33A_	LTR/ERVL	160	326	(205)	3762080
568	33.3	3.3	1.4	chr7	137557845	137558051	(21787922)	+	LTR33A	LTR/ERVL	255	465	(55)	3762081
244	36.2	4.7	2.1	chr7	137658506	137658649	(21687324)	+	MamTip2	DNA/hAT-Tip100	23	170	(135)	3762214
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
949	15.7	0.0	0.0	chr7	138951090	138951229	(20394744)	C	AluSx	SINE/Alu	(36)	276	137	3764605
18	25.3	4.2	1.3	chr7	139035791	139035862	(20310111)	+	(CCGCCT)n	Simple_repeat	1	75	(0)	3764776
12	18.7	4.3	4.2	chr7	139036021	139036066	(20309907)	+	(CGCGG)n	Simple_repeat	1	48	(0)	3764777
14	17.3	5.1	0.0	chr7	139036105	139036143	(20309830)	+	(GCCTGG)n	Simple_repeat	1	41	(0)	3764778
13	15.3	0.0	7.1	chr7	139584140	139584181	(19761792)	+	G-rich	Low_complexity	1	42	(0)	3765880
2183	13.3	0.0	0.3	chr7	140191837	140192145	(19153828)	+	AluJb	SINE/Alu	1	308	(4)	3766863
312	29.6	7.7	6.1	chr7	140192146	140192234	(19153739)	+	L1MC4	LINE/L1	342	422	(2111)	3766862
529	18.8	10.1	0.0	chr7	140192349	140192481	(19153492)	C	MER5A	DNA/hAT-Charlie	(41)	148	1	3766864
2346	24.3	8.0	8.8	chr7	140192484	140193030	(19152943)	+	L1MC4	LINE/L1	507	1078	(1455)	3766862
359	26.9	17.1	4.0	chr7	140239120	140239270	(19106703)	C	MIRb	SINE/MIR	(66)	202	28	3766964
507	24.6	7.4	1.7	chr7	142798583	142798760	(16547213)	+	MIRb	SINE/MIR	9	197	(71)	3771010
30	32.0	0.8	1.6	chr7	143382909	143383029	(15962944)	+	(TCCAGC)n	Simple_repeat	1	122	(0)	3771839
33	3.1	0.0	0.0	chr7	143405430	143405462	(15940511)	+	(TG)n	Simple_repeat	1	33	(0)	3771870
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
1046	22.6	4.5	0.0	chr7	148304483	148304694	(11041279)	C	MER58A	DNA/hAT-Charlie	(1)	223	2	3778567
5180	26.4	9.5	5.3	chr7	148304695	148304934	(11041039)	C	HAL1	LINE/L1	(192)	2315	2086	3778566
1981	15.1	0.3	2.5	chr7	148304935	148305252	(11040721)	+	AluJr	SINE/Alu	2	312	(0)	3778568
12	25.6	3.4	3.3	chr7	148884434	148884494	(10461479)	+	(GCGCGC)n	Simple_repeat	1	61	(0)	3779540
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
187	20.0	2.2	11.8	chr7	149421950	149422000	(9923973)	+	MIR3	SINE/MIR	114	159	(49)	3780678
242	35.0	10.1	1.6	chr7	149833118	149833179	(9512794)	+	MIRb	SINE/MIR	53	129	(139)	3781208
1756	21.9	3.2	1.2	chr7	150317854	150318256	(9027717)	C	MER90a	LTR/ERV1	(21)	593	183	3781866
942	23.1	4.8	0.5	chr7	150318254	150318453	(9027520)	+	MLT1C	LTR/ERVL-MaLR	257	465	(2)	3781867
2030	10.0	5.6	0.0	chr7	150318483	150318753	(9027220)	+	AluSx4	SINE/Alu	2	288	(22)	3781868
2353	8.2	0.0	0.7	chr7	150815255	150815560	(8530413)	+	AluY	SINE/Alu	6	309	(2)	3782498
218	35.6	10.3	1.4	chr7	150938202	150938412	(8407561)	C	MamSINE1	SINE/tRNA-RTE	(43)	247	16	3782684
1469	18.6	2.4	0.4	chr7	151005783	151006029	(8339944)	+	AluJr4	SINE/Alu	38	289	(23)	3782775
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
429	34.5	7.8	5.1	chr7	151110396	151110927	(8235046)	C	L2	LINE/L2	(407)	3012	2465	3782929
29	10.1	3.6	1.8	chr7	151341712	151341766	(8004207)	+	(GCG)n	Simple_repeat	1	57	(0)	3783281
28	2.8	0.0	5.0	chr7	151341988	151342027	(8003946)	+	(GGGCCG)n	Simple_repeat	1	40	(0)	3783282
12	12.6	8.6	0.0	chr7	151520269	151520303	(7825670)	+	(GGCGCGT)n	Simple_repeat	1	38	(0)	3783579
210	27.2	8.0	3.6	chr7	151567082	151567165	(7778808)	+	MIRb	SINE/MIR	20	107	(161)	3783674
642	23.5	9.6	2.4	chr7	151567227	151567454	(7778519)	+	MIR	SINE/MIR	21	257	(5)	3783675
431	25.1	8.5	0.8	chr7	151782648	151782819	(7563154)	+	MIRc	SINE/MIR	60	237	(31)	3784037
180	16.7	0.0	0.0	chr7	151782861	151782890	(7563083)	C	L3b	LINE/CR1	(24)	5208	5179	3784038
12	7.2	10.3	0.0	chr7	152411483	152411511	(6934462)	+	(CTCC)n	Simple_repeat	1	32	(0)	3785063
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
2344	28.7	9.5	5.7	chr7	155065701	155066939	(4279034)	C	ERV3-16A3_I-int	LTR/ERVL	(1400)	3826	2535	3789128
6236	23.2	12.3	4.0	chr7	155661708	155663155	(3682818)	C	L1M4b	LINE/L1	(5268)	1599	2	3789957
942	23.3	2.2	0.5	chr7	156503092	156503311	(2842662)	C	L1M1	LINE/L1	(625)	5679	5456	3790981
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
320	23.6	10.2	1.6	chr7	157412067	157412191	(1933782)	C	LTR37B	LTR/ERV1	(3)	465	329	3792449
2028	26.9	8.7	6.6	chr7	157474719	157475136	(1870837)	C	L1MEf	LINE/L1	(5713)	927	483	3792505
252	32.2	18.8	0.0	chr7	157475173	157475293	(1870680)	C	L1MEf	LINE/L1	(6251)	296	148	3792505
232	28.4	7.5	0.0	chr7	157475310	157475383	(1870590)	C	L1MEf	LINE/L1	(6435)	112	33	3792505
2149	13.6	0.0	0.7	chr7	157475403	157475711	(1870262)	C	AluSx	SINE/Alu	(5)	307	1	3792508
616	26.1	12.1	3.1	chr7	158003034	158003132	(1342841)	+	MLT1B	LTR/ERVL-MaLR	1	115	(275)	3792918
482	33.2	6.0	0.0	chr7	158377591	158377810	(968163)	+	L1MD2	LINE/L1	5603	5836	(523)	3793204
17	19.7	4.8	3.1	chr7	158377861	158377922	(968051)	+	(CACAG)n	Simple_repeat	1	65	(0)	3793205
454	19.8	2.8	2.8	chr7	158470572	158470680	(875293)	+	HY1	scRNA	10	118	(1)	3793279
234	27.0	8.2	6.3	chr7	158522577	158522671	(823302)	C	MamSINE1	SINE/tRNA-RTE	(108)	182	86	3793329
298	28.6	1.1	1.1	chr7	158524618	158524709	(821264)	+	MLT1B	LTR/ERVL-MaLR	23	114	(276)	3793330
375	21.6	5.8	1.0	chr7	158864156	158864253	(481720)	C	LTR56	LTR/ERV1	(342)	103	1	3793810
1728	16.4	1.7	1.4	chr7	158864513	158864804	(481169)	C	AluJo	SINE/Alu	(18)	294	2	3793813
5038	13.7	6.5	0.6	chr8	516976	517824	(144620812)	+	MER4D	LTR/ERV1	1	903	(0)	3794899
5783	15.9	3.1	3.2	chr8	517825	518307	(144620329)	+	L1MC1	LINE/L1	5865	6333	(0)	3794898
13	26.9	5.2	0.0	chr8	537045	537102	(144601534)	+	(ACTCCAG)n	Simple_repeat	1	61	(0)	3794919
1120	28.8	9.4	3.8	chr8	719501	720078	(144418558)	C	L1MC4a	LINE/L1	(544)	7338	6725	3795109
534	21.1	0.9	0.9	chr8	1060161	1060270	(144078366)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	358	3795429
592	20.6	10.8	2.1	chr8	1652283	1652426	(143486210)	+	L2a	LINE/L2	3259	3416	(10)	3795927
3879	14.0	7.8	15.1	chr8	1758319	1759295	(143379341)	C	MER4D1	LTR/ERV1	(0)	900	1	3796052
359	28.2	10.6	1.4	chr8	1992140	1992340	(143146296)	+	MIRb	SINE/MIR	43	261	(7)	3796309
17	16.3	1.8	7.1	chr8	2001817	2001823	(143136813)	+	(GCC)n	Simple_repeat	1	55	(0)	3796320
11	16.3	4.3	6.1	chr8	2001824	2001870	(143136766)	+	(CGCGCCAC)n	Simple_repeat	1	49	(0)	3796321
12	17.4	8.9	0.0	chr8	6708877	6708921	(138429715)	+	(CCGGCGTC)n	Simple_repeat	1	49	(0)	3802489
12	18.1	0.0	3.0	chr8	6835514	6835546	(138303090)	+	(CCTGCC)n	Simple_repeat	1	33	(0)	3802658
569	30.9	4.2	5.0	chr8	6910044	6910285	(138228351)	+	MIR	SINE/MIR	23	262	(0)	3802778
17	32.7	1.0	3.1	chr8	8228448	8228543	(136910093)	+	(CCCCGC)n	Simple_repeat	1	97	(0)	3804364
242	33.3	6.6	0.7	chr8	8387015	8387156	(136751480)	+	MIR3	SINE/MIR	6	156	(52)	3804620
250	29.7	5.2	0.0	chr8	8685715	8685805	(136452831)	+	L2b	LINE/L2	3029	3124	(251)	3805152
1761	9.2	3.1	0.4	chr8	8723785	8724036	(136414600)	+	L1PA8	LINE/L1	5911	6169	(3)	3805209
701	27.4	14.9	7.1	chr8	8934051	8934270	(136204366)	+	L4_C_Mam	LINE/RTE-X	1733	1935	(3203)	3805607
245	37.2	4.6	0.0	chr8	9161409	9161553	(135977083)	C	MIR3	SINE/MIR	(16)	192	41	3806018
208	27.8	14.3	1.1	chr8	10419272	10419362	(134719274)	+	MIRb	SINE/MIR	5	109	(159)	3808032
32	19.2	3.3	3.2	chr8	10547635	10547726	(134590910)	+	(CCTTC)n	Simple_repeat	1	95	(0)	3808243
15	25.6	0.0	0.0	chr8	10547709	10547750	(134590886)	+	(CCC)n	Simple_repeat	1	42	(0)	3808244
21	32.5	1.8	3.5	chr8	10547727	10547745	(134590891)	+	(CCTCCC)n	Simple_repeat	1	113	(0)	3808245
389	27.6	17.8	1.1	chr8	10547784	10548050	(134590586)	C	L2b	LINE/L2	(2)	3424	3104	3808246
23114	10.6	0.6	2.4	chr8	10571484	10575679	(134562957)	+	HERVH-int	LTR/ERV1	1	3993	(3720)	3808286
18	6.4	6.1	0.0	chr8	10730665	10730697	(134407939)	+	(GGGA)n	Simple_repeat	1	35	(0)	3808552
2159	14.2	0.0	0.0	chr8	10763033	10763343	(134375293)	+	AluJr	SINE/Alu	1	311	(1)	3808600
188	32.1	0.0	0.0	chr8	10850730	10850782	(134287854)	+	MIRc	SINE/MIR	101	153	(115)	3808703
201	19.6	0.0	8.9	chr8	11050327	11050382	(134088254)	+	MIR3	SINE/MIR	92	142	(66)	3809009
2500	14.8	10.9	13.5	chr8	11426514	11427195	(133711441)	C	MER4A	LTR/ERV1	(0)	664	3	3809573
302	37.4	7.8	2.9	chr8	11780866	11781143	(133357493)	C	L1ME4c	LINE/L1	(830)	5316	5024	3810147
34130	9.0	0.2	0.8	chr8	11907117	11911625	(133227011)	C	HERVE-int	LTR/ERV1	(3331)	4482	1	3810384
2554	14.9	0.0	0.0	chr8	12850544	12850946	(132287690)	+	MER57B2	LTR/ERV1	1	403	(0)	3811672
359	27.6	6.5	0.0	chr8	12851194	12851309	(132287327)	+	L2a	LINE/L2	3298	3421	(5)	3811673
1116	30.8	11.5	5.7	chr8	12974188	12974543	(132164093)	+	LTR78	LTR/ERV1	852	1233	(71)	3811919
654	29.1	5.2	9.7	chr8	14404718	14405245	(130733391)	+	LTR33A	LTR/ERVL	4	506	(14)	3813971
1362	16.7	15.8	1.7	chr8	16605652	16605950	(128532686)	C	MLT2B1	LTR/ERVL	(8)	512	164	3816984
3133	7.2	0.7	3.0	chr8	17831592	17832052	(127306584)	C	L1MA1	LINE/L1	(1)	6301	5852	3818783
1243	20.5	7.5	10.5	chr8	17832053	17832243	(127306393)	C	MSTB	LTR/ERVL-MaLR	(277)	188	1	3818781
26	18.2	3.1	1.5	chr8	17832244	17832308	(127306328)	+	GA-rich	Low_complexity	1	67	(0)	3818784
16	18.2	2.1	4.2	chr8	18387208	18387279	(126751357)	+	(CCG)n	Simple_repeat	1	70	(0)	3819563
199	29.3	1.3	5.1	chr8	18692390	18692468	(126446168)	C	L2a	LINE/L2	(203)	3172	3097	3819985
1623	23.1	4.9	3.9	chr8	21342498	21342965	(123795671)	+	MER74B	LTR/ERVL	72	544	(78)	3824280
187	33.3	6.4	2.6	chr8	21409395	21409545	(123729091)	+	L2c	LINE/L2	3054	3210	(177)	3824373
1078	29.0	9.7	5.0	chr8	21658770	21659392	(123479244)	+	L2a	LINE/L2	2671	3332	(94)	3824789
1512	26.6	9.4	0.7	chr8	21659393	21659808	(123478828)	+	LTR16B	LTR/ERVL	4	459	(4)	3824793
384	39.2	4.0	0.3	chr8	21812455	21812746	(123325890)	C	Plat_L3	LINE/CR1	(692)	2894	2592	3825058
13	18.9	2.8	0.0	chr8	22066771	22066806	(123071830)	+	(GCGCCCA)n	Simple_repeat	1	37	(0)	3825520
13	20.6	2.1	4.1	chr8	22067021	22067081	(123071555)	+	(CCGCCC)n	Simple_repeat	1	59	(0)	3825521
1896	16.7	2.4	0.0	chr8	22820912	22821199	(122317437)	+	AluJo	SINE/Alu	1	295	(17)	3826864
404	26.9	14.4	0.6	chr8	22834772	22834939	(122303697)	+	MLT1A	LTR/ERVL-MaLR	339	533	(77)	3826882
19	23.6	3.0	1.5	chr8	22999749	22999814	(122138822)	+	(CCGCGCC)n	Simple_repeat	1	68	(0)	3827191
14	30.4	0.0	1.7	chr8	23000159	23000216	(122138420)	+	(CGCCCCG)n	Simple_repeat	1	58	(0)	3827192
1843	17.1	9.2	1.0	chr8	23008542	23009040	(122129596)	C	MER74A	LTR/ERVL	(0)	558	19	3827199
727	16.5	2.7	0.0	chr8	23009026	23009168	(122129468)	+	FLAM_C	SINE/Alu	11	220	(82)	3827200
23	23.7	0.0	0.0	chr8	23009171	23009223	(122129413)	+	G-rich	Low_complexity	1	53	(0)	3827201
12	22.6	0.0	2.6	chr8	23014556	23014593	(122124043)	+	(GGCCT)n	Simple_repeat	1	38	(0)	3827212
15	22.2	5.1	1.6	chr8	23224821	23224879	(121913757)	+	G-rich	Low_complexity	1	62	(0)	3827566
217	23.7	2.6	12.6	chr8	23404448	23404534	(121734102)	+	L2c	LINE/L2	3305	3382	(5)	3827852
309	29.2	4.0	1.0	chr8	23458038	23458134	(121680502)	C	MIRb	SINE/MIR	(105)	163	64	3827941
269	27.1	1.2	8.6	chr8	23458348	23458440	(121680196)	C	MIR3	SINE/MIR	(23)	185	100	3827942
24	11.2	4.2	0.0	chr8	23682701	23682748	(121455888)	+	(CTCTGG)n	Simple_repeat	1	50	(0)	3828342
305	32.3	2.0	1.0	chr8	23715126	23715225	(121423411)	C	MIRc	SINE/MIR	(72)	196	96	3828398
416	25.1	8.8	1.3	chr8	23791545	23791698	(121346938)	C	MIR3	SINE/MIR	(26)	182	17	3828533
379	23.9	0.0	2.1	chr8	23791842	23791935	(121346701)	+	MLT1I	LTR/ERVL-MaLR	320	411	(0)	3828534
13	19.1	0.0	0.0	chr8	23854663	23854692	(121283944)	+	(TGC)n	Simple_repeat	1	30	(0)	3828627
42	10.2	0.0	0.0	chr8	23854706	23854770	(121283866)	+	(GCT)n	Simple_repeat	1	65	(0)	3828628
812	10.1	1.8	0.0	chr8	24977969	24978077	(120160559)	+	AluJr4	SINE/Alu	196	306	(6)	3830276
254	31.4	4.1	0.0	chr8	24978095	24978164	(120160472)	C	MamTip2	DNA/hAT-Tip100	(155)	150	78	3830277
2109	11.5	0.0	0.0	chr8	25686207	25686476	(119452160)	+	AluSz	SINE/Alu	39	308	(4)	3831500
426	38.3	4.6	1.6	chr8	25752940	25753252	(119385384)	+	L1ME2	LINE/L1	83	405	(5995)	3831597
17	5.0	0.0	0.0	chr8	25753300	25753320	(119385316)	+	(CA)n	Simple_repeat	1	21	(0)	3831598
4610	23.5	11.5	2.0	chr8	25753321	25754957	(119383679)	+	L1ME2	LINE/L1	2155	4020	(2299)	3831597
2000	17.6	0.3	1.3	chr8	25900174	25900480	(119238156)	+	AluJo	SINE/Alu	1	304	(8)	3831798
426	21.3	2.7	10.7	chr8	25907450	25907497	(119231139)	C	MER45A	DNA/hAT-Tip100	(62)	116	68	3831813
307	31.7	4.4	1.4	chr8	25907523	25907689	(119230947)	+	MIRc	SINE/MIR	16	189	(79)	3831815
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
2122	8.4	4.7	0.3	chr8	28190574	28190858	(116947778)	C	AluSx1	SINE/Alu	(14)	298	1	3835671
17	10.7	0.0	0.0	chr8	28401816	28401845	(116736791)	+	(CCCT)n	Simple_repeat	1	30	(0)	3836060
66	17.8	6.0	4.8	chr8	28402203	28402437	(116736199)	+	GA-rich	Low_complexity	1	249	(0)	3836061
1962	21.3	7.8	4.8	chr8	28402907	28403149	(116735487)	+	L1ME1	LINE/L1	5604	5868	(311)	3836062
869	20.8	0.0	3.6	chr8	28588329	28588493	(116550143)	C	MER58A	DNA/hAT-Charlie	(65)	159	1	3836452
446	25.8	11.2	12.1	chr8	28588600	28588789	(116549847)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	3836454
640	30.6	16.4	4.8	chr8	28608889	28609596	(116529040)	C	L2a	LINE/L2	(156)	3270	2433	3836497
2191	12.1	0.0	0.0	chr8	28638939	28639235	(116499401)	C	AluSg	SINE/Alu	(13)	297	1	3836571
345	29.1	2.1	0.7	chr8	29011366	29011507	(116127129)	C	L1MC4	LINE/L1	(730)	7312	7169	3837227
14	8.5	10.3	2.3	chr8	29348857	29348895	(115789741)	+	(GCG)n	Simple_repeat	1	43	(0)	3837753
744	33.4	4.5	0.9	chr8	29482668	29483011	(115655625)	C	HAL1	LINE/L1	(2065)	442	86	3837990
1827	12.2	0.7	7.9	chr8	29483017	29483319	(115655317)	+	AluSq	SINE/Alu	1	281	(32)	3837991
2900	19.1	7.4	1.8	chr8	30034288	30034889	(115103747)	C	LTR9B	LTR/ERV1	(0)	644	7	3838908
1535	10.9	2.3	0.5	chr8	30034897	30035107	(115103529)	C	AluSx	SINE/Alu	(97)	215	1	3838907
1914	16.9	0.0	0.0	chr8	30256672	30256955	(114881681)	C	AluJb	SINE/Alu	(27)	285	2	3839389
1106	28.5	11.7	2.5	chr8	30268059	30268655	(114869981)	C	MLT2F	LTR/ERVL	(1)	662	4	3839418
886	28.2	9.2	5.8	chr8	30268695	30269209	(114869427)	C	LTR78B	LTR/ERV1	(762)	534	1	3839419
233	18.3	12.3	4.0	chr8	30541183	30541256	(114597380)	+	MIR3	SINE/MIR	85	165	(43)	3839961
1478	19.6	12.4	0.6	chr8	32998706	32999054	(112139582)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3843789
1658	16.1	9.9	1.7	chr8	32999055	32999091	(112139545)	C	L1MC3	LINE/L1	(459)	7326	7289	3843788
1435	17.1	10.4	0.0	chr8	32999106	32999415	(112139221)	C	L1MC3	LINE/L1	(603)	7182	6837	3843788
978	6.5	0.8	0.0	chr8	33512782	33512904	(111625732)	+	AluYc3	SINE/Alu	177	300	(0)	3844635
765	17.9	2.7	1.7	chr8	33514030	33514265	(111624371)	C	L1PA16	LINE/L1	(8)	6158	5874	3844638
33	0.0	0.0	0.0	chr8	37695353	37695383	(107443253)	+	(CCCAC)n	Simple_repeat	1	31	(0)	3850802
13	18.8	2.6	2.6	chr8	37695584	37695621	(107443015)	+	(GCG)n	Simple_repeat	1	39	(0)	3850803
531	30.7	4.3	2.2	chr8	37721181	37721360	(107417276)	+	MIR3	SINE/MIR	20	203	(5)	3850855
18	22.2	6.7	1.2	chr8	37796835	37796922	(107341714)	+	(CGGCAG)n	Simple_repeat	1	92	(0)	3850992
446	34.2	4.2	0.5	chr8	37801641	37801825	(107336811)	C	MIR3	SINE/MIR	(3)	205	14	3850998
15	4.8	4.5	0.0	chr8	38467551	38467572	(106671064)	+	(AC)n	Simple_repeat	1	23	(0)	3852335
1063	22.9	10.7	2.6	chr8	38721059	38721292	(106417344)	C	MER46C	DNA/TcMar-Tigger	(80)	258	2	3852824
421	32.6	3.9	0.0	chr8	38721301	38721447	(106417189)	C	MIRb	SINE/MIR	(114)	154	2	3852826
1304	27.0	2.5	0.6	chr8	38739775	38740132	(106398504)	C	ERV3-16A3_LTR	LTR/ERVL	(55)	367	3	3852874
300	25.3	2.1	1.0	chr8	38740139	38740234	(106398402)	+	L3	LINE/CR1	3965	4061	(38)	3852875
322	7.5	0.0	0.0	chr8	40339646	40339685	(104798951)	C	tRNA-Leu-TTG	tRNA	(46)	40	1	3855209
369	35.7	7.1	5.7	chr8	40339747	40340079	(104798557)	+	L2c	LINE/L2	3000	3337	(50)	3855210
261	33.3	5.1	0.0	chr8	40953726	40953818	(104184818)	+	L2c	LINE/L2	3048	3145	(242)	3856175
511	26.5	6.1	1.6	chr8	41285135	41285322	(103853314)	C	MIR3	SINE/MIR	(5)	203	7	3856747
391	24.9	36.0	4.6	chr8	42587807	42588154	(102550482)	+	MLT1H2	LTR/ERVL-MaLR	1	463	(86)	3859060
1503	10.8	4.1	0.9	chr8	42588184	42588396	(102550240)	+	AluJb	SINE/Alu	86	305	(7)	3859061
418	34.8	9.9	3.4	chr8	42715041	42715332	(102423304)	C	L2c	LINE/L2	(1)	3386	3074	3859348
2434	7.0	0.3	0.0	chr8	48007924	48008221	(97130415)	C	AluSx	SINE/Alu	(13)	299	1	3862761
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
21173	14.7	4.3	1.9	chr8	48098924	48101235	(97037401)	C	L1MA2	LINE/L1	(5136)	2429	14	3862943
599	25.9	0.0	2.0	chr8	48316690	48316835	(96821801)	+	AmnSINE1	SINE/5S-Deu-L2	38	180	(395)	3863203
1835	25.2	4.7	10.8	chr8	49095047	49096240	(96042396)	+	HERVIP10F-int	LTR/ERV1	3	1000	(6785)	3864026
20214	25.2	1.2	1.3	chr8	49096393	49102174	(96036462)	+	HERVIP10F-int	LTR/ERV1	1035	6740	(863)	3864026
25	12.2	0.0	0.0	chr8	49911552	49911588	(95227048)	+	(A)n	Simple_repeat	1	37	(0)	3865001
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
13	3.8	6.9	3.2	chr8	51520300	51520328	(93618308)	+	(AGAAA)n	Simple_repeat	1	31	(0)	3866890
2070	11.9	0.4	0.4	chr8	51663791	51664068	(93474568)	+	AluSz	SINE/Alu	23	300	(12)	3867076
772	0.0	0.0	0.0	chr8	52100811	52100923	(93037713)	C	AluYb8	SINE/Alu	(0)	318	212	3867725
12	18.2	6.5	2.0	chr8	52565467	52565512	(92573124)	+	G-rich	Low_complexity	1	49	(0)	3868325
182	29.0	7.5	0.0	chr8	53843645	53843706	(91294930)	C	MIRb	SINE/MIR	(88)	180	114	3870001
374	30.1	3.5	3.5	chr8	54379039	54379210	(90759426)	C	MIRb	SINE/MIR	(76)	192	21	3870994
13	24.4	2.2	2.1	chr8	55103145	55103190	(90035446)	+	(CAG)n	Simple_repeat	1	47	(0)	3871977
988	26.4	13.8	2.2	chr8	55983852	55984258	(89154378)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	3873321
481	31.2	12.2	0.7	chr8	56156776	56157065	(88981571)	+	L1MEb	LINE/L1	3625	3952	(2194)	3873618
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
256	28.7	9.6	3.6	chr8	57469105	57469299	(87669337)	+	L3	LINE/CR1	3866	4073	(26)	3875356
367	24.7	10.2	0.0	chr8	58014301	58014450	(87124186)	C	MER5A	DNA/hAT-Charlie	(0)	189	23	3876060
340	16.4	0.0	0.0	chr8	58559610	58559670	(86578966)	+	L1M4	LINE/L1	4101	4161	(1985)	3876768
1273	31.0	6.3	4.3	chr8	58559676	58560549	(86578087)	+	L1MB7	LINE/L1	677	1341	(5224)	3876769
1669	27.0	4.8	2.7	chr8	58850174	58850725	(86287911)	C	MER74B	LTR/ERVL	(0)	622	59	3877170
184	34.9	4.2	5.0	chr8	60653539	60653921	(84484715)	+	L2	LINE/L2	2702	3081	(338)	3879550
1413	30.2	6.8	0.8	chr8	61792188	61792687	(83345949)	C	L2	LINE/L2	(2484)	935	404	3881130
6036	19.1	3.8	2.9	chr8	64060014	64060846	(81077790)	+	L1MA4	LINE/L1	1243	2085	(4480)	3884009
14	21.0	4.5	0.0	chr8	64579897	64579940	(80558696)	+	G-rich	Low_complexity	1	46	(0)	3884652
2492	17.2	15.5	3.7	chr8	65164496	65165111	(79973525)	+	MER39	LTR/ERV1	3	704	(3)	3885389
543	0.0	0.0	21.5	chr8	66113367	66113459	(79025177)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886877
21	3.0	5.9	0.0	chr8	66523107	66523140	(78615496)	+	(CTGGGAG)n	Simple_repeat	1	36	(0)	3887534
15	20.8	4.3	0.0	chr8	66523141	66523151	(78615485)	+	G-rich	Low_complexity	2	48	(0)	3887535
14	24.0	5.8	2.7	chr8	66613395	66613463	(78525173)	+	G-rich	Low_complexity	1	73	(0)	3887701
254	35.5	6.8	3.1	chr8	67028312	67028439	(78110197)	+	MER5A	DNA/hAT-Charlie	54	186	(3)	3888571
2335	16.0	2.1	2.6	chr8	68483956	68484385	(76654251)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3890753
627	29.7	6.5	2.1	chr8	69483881	69484117	(75654519)	C	MIR	SINE/MIR	(0)	262	15	3892093
383	24.2	6.2	3.2	chr8	69484291	69484384	(75654252)	+	L2c	LINE/L2	3291	3387	(0)	3892094
21	25.9	1.1	5.4	chr8	71673421	71673511	(73465125)	+	(TAAT)n	Simple_repeat	1	92	(0)	3895528
29	0.0	3.2	0.0	chr8	72537354	72537384	(72601252)	+	(CCGCCCT)n	Simple_repeat	1	32	(0)	3896586
2792	26.4	9.5	2.6	chr8	74114274	74114946	(71023690)	C	ERVL-E-int	LTR/ERVL	(1250)	4417	3521	3899209
344	34.2	3.1	3.1	chr8	74114938	74115100	(71023536)	C	ERVL-E-int	LTR/ERVL	(2031)	3726	3519	3899209
308	31.5	3.1	14.4	chr8	74222289	74222410	(70916226)	+	MIR	SINE/MIR	25	118	(144)	3899402
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
898	30.2	6.7	1.4	chr8	74336924	74337350	(70801286)	+	LTR16A	LTR/ERVL	1	451	(0)	3899531
621	28.9	8.4	8.9	chr8	74337575	74338014	(70800622)	+	MamGypLTR2c	LTR/Gypsy	612	1049	(19)	3899532
297	25.3	2.2	1.1	chr8	75009029	75009116	(70129520)	C	Tigger15a	DNA/TcMar-Tigger	(479)	236	148	3900421
360	28.0	12.3	2.7	chr8	75009331	75009477	(70129159)	C	MLT1F1	LTR/ERVL-MaLR	(371)	198	36	3900422
9927	11.6	1.2	1.1	chr8	75567276	75568807	(69569829)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3901184
2068	14.2	3.7	2.9	chr8	75568808	75569042	(69569594)	C	THE1D	LTR/ERVL-MaLR	(0)	381	148	3901184
186	25.0	5.1	3.5	chr8	78516730	78516787	(66621849)	+	OldhAT1	DNA/hAT-Ac	2483	2541	(307)	3904792
308	31.3	8.5	2.7	chr8	79677739	79677925	(65460711)	+	L1M6	LINE/L1	262	460	(2259)	3906317
1017	26.9	11.1	4.4	chr8	79759898	79760356	(65378280)	C	L2a	LINE/L2	(0)	3426	2933	3906475
14	18.0	2.0	5.9	chr8	79767523	79767572	(65371064)	+	(CTCCG)n	Simple_repeat	1	51	(0)	3906479
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
244	27.8	13.6	2.9	chr8	80441552	80441688	(64696948)	C	L2b	LINE/L2	(156)	3231	3076	3907794
243	31.6	13.7	2.8	chr8	80441759	80442181	(64696455)	C	L2b	LINE/L2	(401)	3018	2543	3907794
19	25.2	1.2	5.9	chr8	80487371	80487475	(64651161)	+	(GGC)n	Simple_repeat	1	100	(0)	3907904
37	0.0	0.0	0.0	chr8	85464147	85464180	(59674456)	+	(CCCCGAT)n	Simple_repeat	1	34	(0)	3914610
17576	17.9	5.1	5.0	chr8	89403725	89407969	(55730667)	+	HERV35I-int	LTR/ERV1	971	5987	(931)	3919768
45	20.6	4.1	0.8	chr8	90081745	90081865	(55056771)	+	(TCTC)n	Simple_repeat	1	126	(0)	3920709
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
16	9.3	0.0	0.0	chr8	90789468	90789490	(54349146)	+	(GT)n	Simple_repeat	1	23	(0)	3921621
2162	28.4	3.0	0.2	chr8	90789509	90790082	(54348554)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	1	3921622
1084	26.0	8.6	9.7	chr8	92047079	92047641	(53090995)	+	L2a	LINE/L2	2884	3424	(2)	3923348
3960	16.7	6.2	5.8	chr8	92302027	92302840	(52835796)	C	LTR1B1	LTR/ERV1	(0)	818	1	3923702
256	31.7	6.8	0.9	chr8	93636524	93636644	(51501992)	C	MIRc	SINE/MIR	(37)	171	39	3925523
251	21.9	18.8	0.0	chr8	93884515	93884596	(51254040)	+	MIRb	SINE/MIR	60	160	(108)	3925991
282	25.9	11.9	1.8	chr8	94235059	94235223	(50903413)	+	MIRb	SINE/MIR	2	185	(83)	3926509
5089	7.8	3.0	4.7	chr8	94439452	94440231	(50698405)	C	MER4E	LTR/ERV1	(0)	766	1	3926816
249	34.7	4.6	4.0	chr8	95682076	95682225	(49456411)	C	LTR104_Mam	LTR/Gypsy	(345)	1164	1014	3929129
17	13.2	3.5	6.8	chr8	98033249	98033305	(47105331)	+	GA-rich	Low_complexity	1	59	(0)	3932960
31	21.2	0.0	0.0	chr8	98947817	98947887	(46190749)	+	(CTCCTCT)n	Simple_repeat	1	71	(0)	3934483
15	20.8	6.0	0.0	chr8	98974241	98974290	(46164346)	+	(GGCGC)n	Simple_repeat	1	53	(0)	3934521
417	25.6	8.8	3.8	chr8	99643618	99643800	(45494836)	+	MER63A	DNA/hAT-Blackjack	18	210	(0)	3935508
12	11.2	3.2	3.1	chr8	100158641	100158671	(44979965)	+	(ATGTGG)n	Simple_repeat	1	32	(0)	3936265
263	36.5	10.0	0.5	chr8	100396256	100396453	(44742183)	C	MIRb	SINE/MIR	(22)	246	28	3936707
13	16.4	7.3	0.0	chr8	100396549	100396589	(44742047)	+	(GTATTTT)n	Simple_repeat	1	44	(0)	3936708
1302	28.6	5.5	6.6	chr8	100506182	100506780	(44631856)	+	L2a	LINE/L2	2827	3421	(5)	3936912
1138	11.9	8.1	12.5	chr8	100507074	100507341	(44631295)	+	MER33	DNA/hAT-Charlie	1	253	(71)	3936916
672	14.3	15.0	2.0	chr8	100835623	100835772	(44302864)	C	LTR41	LTR/ERVL	(595)	173	1	3937611
550	22.4	9.6	0.0	chr8	100835773	100835951	(44302685)	C	HAL1	LINE/L1	(355)	2152	1955	3937612
1173	18.5	7.5	20.9	chr8	101041079	101041562	(44097074)	+	MLT2D	LTR/ERVL	1	414	(0)	3938038
12	21.1	0.0	2.9	chr8	101154843	101154877	(43983759)	+	G-rich	Low_complexity	1	35	(0)	3938260
1358	7.4	0.0	0.0	chr8	101438961	101439123	(43699513)	C	AluSx	SINE/Alu	(7)	305	143	3938753
401	22.5	13.8	3.2	chr8	102105757	102105976	(43032660)	+	MIR	SINE/MIR	4	250	(12)	3939798
567	35.3	5.0	0.6	chr8	102155445	102155809	(42982827)	+	L1MEc	LINE/L1	38	419	(5981)	3939874
909	30.1	5.7	3.2	chr8	102569109	102569600	(42569036)	C	LTR33	LTR/ERVL	(7)	508	4	3940647
628	25.4	2.9	0.0	chr8	102632837	102633001	(42505635)	+	MLT1J1	LTR/ERVL-MaLR	1	170	(274)	3940786
951	22.5	14.6	6.7	chr8	102633008	102633348	(42505288)	+	MLT1C	LTR/ERVL-MaLR	8	398	(69)	3940787
2440	5.5	1.7	0.3	chr8	102633349	102633640	(42504996)	C	AluY	SINE/Alu	(14)	297	2	3940788
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
16	11.7	0.0	0.0	chr8	103371702	103371729	(41766907)	+	(CTG)n	Simple_repeat	1	28	(0)	3942202
15	11.1	0.0	3.2	chr8	106657558	106657588	(38481048)	+	(GCGGG)n	Simple_repeat	1	31	(0)	3946882
199	20.9	4.4	0.0	chr8	109645521	109645563	(35493073)	+	MIRc	SINE/MIR	20	64	(204)	3951140
836	23.1	0.0	0.0	chr8	109645628	109645796	(35492840)	C	FRAM	SINE/Alu	(0)	176	8	3951141
1829	15.4	4.7	0.6	chr8	111741275	111741601	(33397035)	+	MER61A	LTR/ERV1	1	341	(0)	3953897
308	26.9	3.4	7.8	chr8	116164345	116164497	(28974139)	+	L1ME4a	LINE/L1	5951	6096	(28)	3959629
7688	8.4	1.4	0.1	chr8	116498938	116500000	(28638636)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	498	3960122
4012	6.6	0.0	0.0	chr8	116500001	116500497	(28638139)	C	THE1B-int	LTR/ERVL-MaLR	(1083)	497	1	3960123
2570	21.3	9.0	4.9	chr8	116732805	116733577	(28405059)	C	MER21C	LTR/ERVL	(11)	927	123	3960490
226	32.3	11.4	3.7	chr8	118084525	118084685	(27053951)	+	MER5B	DNA/hAT-Charlie	1	175	(3)	3962673
521	27.6	6.1	7.8	chr8	118084710	118084943	(27053693)	+	MIRb	SINE/MIR	29	259	(3)	3962674
216	30.3	1.3	2.6	chr8	118097033	118097110	(27041526)	+	L2a	LINE/L2	3125	3201	(225)	3962693
2355	13.2	0.0	0.3	chr8	118097164	118097473	(27041163)	+	AluSz	SINE/Alu	1	309	(3)	3962694
1237	24.6	13.4	4.3	chr8	118143871	118144316	(26994320)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	13	3962779
824	22.9	3.8	0.5	chr8	118576127	118576328	(26562308)	+	MER3	DNA/hAT-Charlie	1	209	(0)	3963522
15293	18.8	2.9	1.8	chr8	120786286	120790989	(24347647)	+	L1PB3	LINE/L1	713	5507	(1408)	3967180
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
311	18.8	5.9	0.0	chr8	123157591	123157654	(21980982)	C	L2b	LINE/L2	(15)	3360	3293	3971277
18	23.0	0.0	5.9	chr8	124475020	124475087	(20663549)	+	(CCCGCC)n	Simple_repeat	1	68	(0)	3973783
15	19.9	2.5	0.0	chr8	124475055	124475094	(20663542)	+	(GCCCT)n	Simple_repeat	1	41	(0)	3973784
1043	21.8	15.1	5.7	chr8	125397146	125397563	(19741073)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	1	3975492
243	35.8	2.4	0.0	chr8	125416830	125416910	(19721726)	+	L2b	LINE/L2	3276	3358	(17)	3975544
12	22.4	2.7	0.0	chr8	125416912	125416948	(19721688)	+	A-rich	Low_complexity	1	38	(0)	3975545
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
199	34.7	3.2	4.7	chr8	125778675	125778801	(19359835)	+	L2b	LINE/L2	3184	3308	(79)	3976371
2340	13.5	2.3	0.5	chr8	126094864	126095249	(19043387)	+	LTR57	LTR/ERVL	19	411	(0)	3976888
17744	15.5	2.8	1.2	chr8	126095250	126095633	(19043003)	+	LTR57-int	LTR/ERVL	1	386	(4957)	3976888
2211	11.2	0.6	1.0	chr8	126095634	126095946	(19042690)	+	AluSz	SINE/Alu	1	312	(0)	3976889
750	23.0	8.5	1.7	chr8	126522588	126522817	(18615819)	C	LTR16A1	LTR/ERVL	(2)	454	208	3977660
13	24.1	1.7	5.0	chr8	126558530	126558588	(18580048)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	3977739
1576	19.1	3.4	0.7	chr8	126606414	126606701	(18531935)	+	AluJr	SINE/Alu	1	296	(16)	3977847
42	30.9	3.6	0.0	chr8	126606703	126606868	(18531768)	+	(TA)n	Simple_repeat	1	172	(0)	3977848
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
396	33.9	10.2	3.9	chr8	127750571	127751088	(17387548)	+	L2b	LINE/L2	2587	3160	(215)	3979989
341	29.1	6.9	1.4	chr8	127751184	127751352	(17387284)	C	MIRc	SINE/MIR	(69)	199	17	3979992
233	30.8	17.2	3.2	chr8	127751907	127752154	(17386482)	C	L2c	LINE/L2	(7)	3380	3091	3979993
186	19.4	0.0	0.0	chr8	127853239	127853274	(17285362)	C	L2c	LINE/L2	(228)	3159	3124	3980249
328	30.6	15.0	0.7	chr8	127911597	127911744	(17226892)	C	MIRb	SINE/MIR	(80)	188	16	3980382
12	18.1	0.0	3.0	chr8	128050227	128050259	(17088377)	+	(CCATC)n	Simple_repeat	1	33	(0)	3980684
37	25.4	5.0	3.0	chr8	130796724	130796884	(14341752)	+	(CTC)n	Simple_repeat	1	169	(0)	3985784
1454	10.9	3.9	1.8	chr8	130797123	130797347	(14341289)	+	MER30	DNA/hAT-Charlie	1	230	(0)	3985785
20661	9.5	1.9	1.6	chr8	131741154	131744138	(13394498)	+	HERVH-int	LTR/ERV1	1	2995	(4718)	3987338
6159	9.2	0.9	0.2	chr8	131744118	131744965	(13393671)	+	HERVH-int	LTR/ERV1	3140	3993	(3720)	3987338
316	29.8	7.5	1.9	chr8	131777993	131778152	(13360484)	C	MIR	SINE/MIR	(81)	187	7	3987392
593	30.7	7.0	3.4	chr8	131778230	131778462	(13360174)	+	MIRb	SINE/MIR	27	268	(0)	3987393
2073	16.9	0.8	4.8	chr8	132487806	132488203	(12650433)	C	MLT1B	LTR/ERVL-MaLR	(8)	382	1	3988687
366	24.2	19.9	3.0	chr8	132675888	132676056	(12462580)	+	MIRb	SINE/MIR	32	230	(38)	3989016
11	18.1	2.4	4.8	chr8	134713228	134713268	(10425368)	+	(TCCGGAG)n	Simple_repeat	1	42	(0)	3992734
251	28.7	4.4	6.9	chr8	134713321	134713436	(10425200)	+	MIRc	SINE/MIR	28	140	(128)	3992735
26	4.9	2.0	6.0	chr8	139704969	139705014	(5433622)	+	(AT)n	Simple_repeat	1	44	(0)	4000771
12	14.1	3.0	2.9	chr8	139705192	139705224	(5433412)	+	(CCTCTC)n	Simple_repeat	1	34	(0)	4000772
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
213	23.5	0.0	3.8	chr8	140458276	140458328	(4680308)	+	L2b	LINE/L2	3099	3149	(226)	4001985
346	24.1	6.1	10.7	chr8	140464199	140464319	(4674317)	+	L2b	LINE/L2	3260	3374	(1)	4002004
1049	19.3	8.6	2.5	chr8	140898047	140898347	(4240289)	C	MER5C	DNA/hAT-Charlie	(0)	313	12	4002763
2318	15.6	6.8	0.0	chr8	140942769	140943165	(4195471)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	4002842
4256	21.8	4.6	0.7	chr8	141267653	141268622	(3870014)	+	L1MC1	LINE/L1	5319	6327	(6)	4003396
357	31.8	10.5	2.4	chr8	141309188	141309395	(3829241)	+	MIR	SINE/MIR	1	224	(38)	4003446
1554	22.0	9.1	1.2	chr8	141309409	141309980	(3828656)	+	L1ME3A	LINE/L1	5471	6121	(52)	4003447
303	38.2	8.2	5.5	chr8	141336720	141337063	(3801573)	C	L2b	LINE/L2	(3)	3372	3019	4003495
1768	30.4	5.0	5.1	chr8	141887982	141889587	(3249049)	+	L1ME3Cz	LINE/L1	4037	5636	(666)	4004264
769	25.6	1.7	0.4	chr8	141889611	141889838	(3248798)	C	MER20B	DNA/hAT-Charlie	(31)	752	522	4004265
213	31.7	7.9	0.0	chr8	142383649	142383730	(2754906)	C	MIRb	SINE/MIR	(15)	253	165	4004833
55	25.7	5.7	3.4	chr8	142448938	142449218	(2689418)	+	(CCAT)n	Simple_repeat	1	297	(0)	4004912
239	15.0	0.0	0.0	chr8	142471112	142471151	(2667485)	C	Charlie26a	DNA/hAT-Charlie	(4)	321	282	4004943
2573	12.0	4.1	9.7	chr8	142758988	142759586	(2379050)	+	MER4B	LTR/ERV1	1	564	(46)	4005269
15	14.2	0.0	3.0	chr8	143080230	143080262	(2058374)	+	(CCT)n	Simple_repeat	1	33	(0)	4005694
492	40.4	0.8	0.6	chr8	143122740	143125236	(2013400)	+	(CA)n	Simple_repeat	1	2518	(0)	4005777
235	24.6	1.7	0.0	chr8	143218543	143218599	(1920037)	C	MIRc	SINE/MIR	(168)	100	43	4005922
592	23.6	13.2	8.9	chr8	143245688	143245933	(1892703)	+	MLT1E1	LTR/ERVL-MaLR	366	623	(31)	4005972
27	27.1	2.1	2.1	chr8	143430089	143430182	(1708454)	+	(GCC)n	Simple_repeat	1	96	(0)	4006202
16	13.6	5.6	5.3	chr8	143430381	143430434	(1708202)	+	(GCGCCC)n	Simple_repeat	1	57	(0)	4006203
17	27.7	2.4	7.1	chr8	144336660	144336783	(801853)	+	(GGCGCC)n	Simple_repeat	1	127	(0)	4007464
33	2.9	0.0	0.0	chr8	144336885	144336919	(801717)	+	(GGC)n	Simple_repeat	1	35	(0)	4007465
13	30.2	0.0	0.0	chr8	144467711	144467755	(670881)	+	(CAG)n	Simple_repeat	1	45	(0)	4007646
15	20.6	3.9	1.9	chr8	144518167	144518218	(620418)	+	G-rich	Low_complexity	1	54	(0)	4007701
820	14.0	0.0	0.0	chr8	144733263	144733376	(405260)	+	AluJb	SINE/Alu	5	118	(194)	4008005
12	22.0	2.7	0.0	chr8	144733687	144733723	(404913)	+	(TCCTCCC)n	Simple_repeat	1	38	(0)	4008006
15	10.0	0.0	7.9	chr8	144755323	144755360	(383276)	+	(CCGCC)n	Simple_repeat	1	38	(0)	4008042
1757	16.9	1.0	2.4	chr8	144808861	144809155	(329481)	+	AluJb	SINE/Alu	2	292	(20)	4008134
38896	12.5	3.5	2.6	chr8	144867643	144868353	(270283)	C	LTR46-int	LTR/ERV1	(6262)	723	2	4008220
304	9.1	0.0	0.0	chr8	144868354	144868397	(270239)	C	LTR46	LTR/ERV1	(0)	460	417	4008220
16	0.0	0.0	0.0	chr8	144868398	144868415	(270221)	+	(CA)n	Simple_repeat	1	18	(0)	4008228
625	32.9	4.7	1.2	chr9	754743	754988	(137639729)	C	MLT1H	LTR/ERVL-MaLR	(273)	276	22	4009673
1706	26.0	10.8	5.4	chr9	1005811	1006617	(137388100)	C	L1MC5a	LINE/L1	(14)	2763	1909	4010121
2334	8.7	1.3	1.0	chr9	1006618	1006926	(137387791)	C	AluSx	SINE/Alu	(1)	311	2	4010122
15	17.8	2.0	5.9	chr9	1050568	1050617	(137344100)	+	(CTCC)n	Simple_repeat	1	51	(0)	4010202
633	26.7	4.1	6.3	chr9	1294389	1294640	(137100077)	+	MIRc	SINE/MIR	13	258	(10)	4010569
318	26.4	11.2	0.7	chr9	1294651	1294787	(137099930)	+	MIR3	SINE/MIR	44	199	(9)	4010570
225	29.5	6.0	1.3	chr9	1294806	1294884	(137099833)	C	L2b	LINE/L2	(0)	3426	3306	4010571
1807	14.6	2.5	0.4	chr9	6791138	6791405	(131603312)	C	AluSz	SINE/Alu	(38)	274	1	4018766
936	11.9	0.0	5.6	chr9	6874804	6874946	(131519771)	+	FLAM_C	SINE/Alu	1	135	(8)	4018926
248	27.1	0.0	0.0	chr9	10049189	10049247	(128345470)	C	MIR3	SINE/MIR	(12)	196	138	4023209
12	24.1	0.0	0.0	chr9	14322573	14322606	(124072111)	+	(CGCCC)n	Simple_repeat	1	34	(0)	4028796
16	0.0	0.0	0.0	chr9	14495447	14495464	(123899253)	+	(T)n	Simple_repeat	1	18	(0)	4029071
493	26.2	13.9	2.7	chr9	15513437	15513620	(122881097)	C	MIRb	SINE/MIR	(57)	211	4	4030662
205	32.5	11.3	4.5	chr9	15513889	15513987	(122880730)	+	L2c	LINE/L2	3244	3357	(30)	4030663
3653	24.2	7.1	0.6	chr9	16404417	16405379	(121989338)	C	L1MEf	LINE/L1	(5483)	1064	35	4031916
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
11742	8.9	0.0	0.2	chr9	19250528	19252039	(119142678)	C	THE1B-int	LTR/ERVL-MaLR	(71)	1509	1	4035973
2629	9.7	0.6	2.7	chr9	19252040	19252411	(119142306)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4035973
201	29.9	11.4	2.5	chr9	19410208	19410327	(118984390)	C	MIR3	SINE/MIR	(32)	176	45	4036277
27	20.2	2.4	8.5	chr9	19464859	19464985	(118929732)	+	(GCTGCGG)n	Simple_repeat	1	130	(0)	4036382
5502	20.3	7.7	2.6	chr9	25226007	25227203	(113167514)	C	LTR2752	LTR/ERV1	(0)	1263	1	4044073
312	34.0	13.0	2.4	chr9	27122123	27122417	(111272300)	C	L2b	LINE/L2	(0)	3375	3045	4046691
5330	31.0	10.0	1.2	chr9	28797525	28799664	(109595053)	C	L2a	LINE/L2	(834)	2585	236	4049069
188	34.6	2.7	14.6	chr9	29159849	29160050	(109234667)	C	MIRb	SINE/MIR	(27)	241	50	4049556
861	25.0	0.0	0.5	chr9	29160051	29160239	(109234478)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	4049557
188	33.9	1.8	15.6	chr9	29160240	29160280	(109234437)	C	MIRb	SINE/MIR	(216)	52	16	4049556
500	29.9	13.6	2.2	chr9	29160281	29160502	(109234215)	+	MIR	SINE/MIR	2	252	(10)	4049558
20	4.1	0.0	0.0	chr9	34590167	34590191	(103804526)	+	(CA)n	Simple_repeat	1	25	(0)	4057645
264	24.6	6.2	0.0	chr9	34612670	34612730	(103781987)	+	L2a	LINE/L2	3356	3420	(6)	4057681
634	16.8	12.3	0.0	chr9	34651699	34651841	(103742876)	C	MER5B	DNA/hAT-Charlie	(15)	163	1	4057742
12	12.8	5.6	2.6	chr9	34652039	34652074	(103742643)	+	(GGTGGA)n	Simple_repeat	1	38	(0)	4057743
23	17.4	2.9	4.2	chr9	34652148	34652217	(103742500)	+	(GCGAGG)n	Simple_repeat	1	72	(0)	4057744
21	14.2	0.0	0.0	chr9	34665385	34665423	(103729294)	+	(GGGCG)n	Simple_repeat	1	39	(0)	4057758
1368	25.6	8.3	11.0	chr9	35226314	35226353	(103168364)	C	MLT2A2	LTR/ERVL	(0)	554	515	4058564
31	3.3	0.0	0.0	chr9	35226354	35226384	(103168333)	+	(GT)n	Simple_repeat	1	31	(0)	4058565
1739	19.4	5.2	5.3	chr9	35226385	35226901	(103167816)	C	MLT2A2	LTR/ERVL	(40)	514	13	4058564
16	4.5	0.0	0.0	chr9	35538589	35538611	(102856106)	+	(AAGG)n	Simple_repeat	1	23	(0)	4059037
18	18.9	2.4	0.0	chr9	35538862	35538903	(102855814)	+	(AGC)n	Simple_repeat	1	43	(0)	4059038
35	42.0	0.8	0.8	chr9	35829424	35829664	(102565053)	+	(CCGCCC)n	Simple_repeat	1	243	(0)	4059488
17	27.8	0.0	5.3	chr9	35846366	35846441	(102548276)	+	G-rich	Low_complexity	1	76	(0)	4059510
14	20.9	0.0	0.0	chr9	35910476	35910508	(102484209)	+	(GTG)n	Simple_repeat	1	33	(0)	4059613
300	29.6	2.2	0.7	chr9	36136008	36136143	(102258574)	C	L2c	LINE/L2	(314)	3073	2936	4060024
181	31.6	7.0	7.6	chr9	36897567	36897710	(101497007)	C	MIR3	SINE/MIR	(63)	145	3	4061661
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
1219	8.5	0.0	2.4	chr9	37592779	37592942	(100801775)	+	AluSx	SINE/Alu	125	284	(28)	4062992
295	15.7	10.3	13.6	chr9	38070030	38070067	(100324650)	C	MIR3	SINE/MIR	(19)	189	147	4063873
2448	5.5	0.0	1.0	chr9	38070068	38070359	(100324358)	+	AluSg7	SINE/Alu	1	289	(20)	4063874
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
11	32.6	0.0	1.8	chr9	62800083	62800137	(75594580)	+	G-rich	Low_complexity	1	55	(0)	4073671
1000	26.9	6.2	11.3	chr9	68735690	68736273	(69658444)	C	L2a	LINE/L2	(144)	3282	2729	4080346
466	28.3	10.2	2.8	chr9	68736311	68736449	(69658268)	C	L1ME4c	LINE/L1	(125)	705	542	4080347
2387	17.2	8.1	0.6	chr9	68736450	68736916	(69657801)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	4080348
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
17	13.2	0.0	2.9	chr9	68780223	68780257	(69614460)	+	(CGG)n	Simple_repeat	1	35	(0)	4080421
13	8.9	0.0	3.9	chr9	69174013	69174038	(69220679)	+	(GCC)n	Simple_repeat	1	26	(0)	4081171
19	20.6	0.0	0.0	chr9	69174299	69174343	(69220374)	+	(AGCAGG)n	Simple_repeat	1	45	(0)	4081172
38	37.7	0.5	0.5	chr9	69221088	69221273	(69173444)	+	(GACCGG)n	Simple_repeat	1	187	(0)	4081262
279	31.1	16.3	1.0	chr9	69343003	69343194	(69051523)	C	LTR82B	LTR/ERVL	(2)	828	602	4081475
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
424	21.8	2.0	10.4	chr9	70640989	70641152	(67753565)	C	MER20	DNA/hAT-Charlie	(69)	150	1	4083525
647	24.5	1.2	0.0	chr9	70641162	70641324	(67753393)	+	MER5A1	DNA/hAT-Charlie	2	166	(0)	4083526
21574	14.0	3.5	3.8	chr9	71222495	71224754	(67169963)	+	L1MA3	LINE/L1	16	2302	(5263)	4084368
405	35.0	6.9	6.4	chr9	71250376	71251060	(67143657)	C	L2a	LINE/L2	(0)	3426	2743	4084401
2719	12.7	1.9	1.0	chr9	73195981	73196393	(65198324)	+	MSTA	LTR/ERVL-MaLR	1	417	(11)	4087743
13	5.3	0.0	0.0	chr9	74952304	74952323	(63442394)	+	(GGC)n	Simple_repeat	1	20	(0)	4090268
1284	18.6	8.8	2.1	chr9	75087385	75087670	(63307047)	C	MER58B	DNA/hAT-Charlie	(0)	341	35	4090517
1456	23.6	4.4	0.8	chr9	75522839	75523210	(62871507)	+	MLT1D	LTR/ERVL-MaLR	113	498	(7)	4091109
2398	20.7	4.1	1.4	chr9	75523218	75523627	(62871090)	+	MER45B	DNA/hAT-Tip100	452	877	(163)	4091111
13	21.1	0.0	6.1	chr9	76394000	76394048	(62000669)	+	(CCCCGCT)n	Simple_repeat	1	49	(0)	4092454
579	5.8	0.0	0.0	chr9	76470687	76470773	(61923944)	+	L1MA7	LINE/L1	6201	6287	(4)	4092621
433	34.1	8.8	2.6	chr9	76470841	76471168	(61923549)	C	LTR82A	LTR/ERVL	(354)	476	164	4092622
369	17.3	14.2	4.1	chr9	77087707	77087851	(61306866)	C	MamRep605	LTR?	(630)	219	58	4093718
232	12.5	0.0	2.4	chr9	77087881	77087921	(61306796)	C	MER5C	DNA/hAT-Charlie	(2)	311	272	4093719
661	24.3	9.8	4.8	chr9	77924801	77925111	(60469606)	+	LTR33	LTR/ERVL	8	335	(180)	4094994
2128	7.2	0.0	0.8	chr9	79233264	79233525	(59161192)	C	AluY	SINE/Alu	(5)	306	47	4096939
230	41.2	2.9	1.4	chr9	79233943	79234080	(59160637)	C	MIR3	SINE/MIR	(49)	159	20	4096940
12	5.6	0.0	0.0	chr9	79726290	79726308	(58668409)	+	(TGT)n	Simple_repeat	1	19	(0)	4097653
1982	19.6	14.4	1.3	chr9	81600662	81601112	(56793605)	+	MLT2B1	LTR/ERVL	1	520	(0)	4100169
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
16	23.3	1.3	7.7	chr9	83622940	83623016	(54771701)	+	G-rich	Low_complexity	1	78	(0)	4103205
180	18.2	0.0	0.0	chr9	83623330	83623362	(54771355)	C	MIR3	SINE/MIR	(60)	148	116	4103206
988	23.6	6.8	11.4	chr9	84769990	84770153	(53624564)	+	LTR16A2	LTR/ERVL	14	169	(326)	4105211
52	2.1	0.0	0.0	chr9	84770154	84770202	(53624515)	+	(AC)n	Simple_repeat	1	49	(0)	4105212
988	23.6	6.8	11.4	chr9	84770203	84770544	(53624173)	+	LTR16A2	LTR/ERVL	170	495	(0)	4105211
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
1966	14.1	5.1	3.9	chr9	88026255	88026463	(50368254)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	173	4110347
2367	9.1	0.3	0.0	chr9	88026464	88026761	(50367956)	C	AluSp	SINE/Alu	(10)	303	5	4110348
2254	13.1	0.0	0.3	chr9	88045467	88045779	(50348938)	C	AluSq	SINE/Alu	(0)	313	2	4110384
5726	11.8	2.3	3.5	chr9	88045780	88046324	(50348393)	+	MER4D	LTR/ERV1	347	900	(3)	4110383
165	20.1	3.1	0.5	chr9	89524636	89525019	(48869698)	+	GA-rich	Low_complexity	1	396	(0)	4112602
240	24.0	11.7	6.9	chr9	91196447	91196576	(47198141)	+	MLT1K	LTR/ERVL-MaLR	174	310	(285)	4114857
519	9.2	3.8	0.6	chr9	91578087	91578180	(46816537)	+	MLT1B	LTR/ERVL-MaLR	117	218	(249)	4115409
17	28.4	0.0	4.1	chr9	92809484	92809556	(45585161)	+	(GGATTT)n	Simple_repeat	1	73	(0)	4117251
3953	19.3	6.2	0.4	chr9	92828934	92829639	(45565078)	+	L1MA4A	LINE/L1	3	751	(6098)	4117283
2122	17.2	5.2	2.8	chr9	93071137	93071682	(45323035)	C	MLT2A2	LTR/ERVL	(0)	554	1	4117657
432	27.4	6.2	3.6	chr9	93071683	93071819	(45322898)	C	MLT1J	LTR/ERVL-MaLR	(310)	202	62	4117658
1959	16.6	2.3	0.0	chr9	93125922	93126223	(45268494)	+	AluJb	SINE/Alu	1	309	(3)	4117757
209	28.2	16.0	1.8	chr9	93365449	93365560	(45029157)	+	MIR3	SINE/MIR	15	145	(63)	4118049
13	7.6	7.1	0.0	chr9	93451640	93451667	(44943050)	+	(GCCCC)n	Simple_repeat	1	30	(0)	4118196
1181	27.8	4.5	1.5	chr9	95215476	95215892	(43178825)	+	MLT1G3	LTR/ERVL-MaLR	1	469	(126)	4120852
3926	24.8	9.1	2.4	chr9	95215971	95216469	(43178248)	+	L1ME1	LINE/L1	2272	2799	(3522)	4120847
23	24.9	1.5	0.0	chr9	96655321	96655386	(41739331)	+	G-rich	Low_complexity	1	67	(0)	4123269
628	12.6	0.9	7.6	chr9	96655653	96655771	(41738946)	+	AluJr	SINE/Alu	21	131	(181)	4123270
191	24.6	8.4	4.4	chr9	96777633	96777700	(41617017)	C	MIRb	SINE/MIR	(186)	82	12	4123477
16	16.8	0.0	0.0	chr9	97851930	97851956	(40542761)	+	(C)n	Simple_repeat	1	27	(0)	4125270
232	26.3	7.3	0.0	chr9	97860083	97860158	(40534559)	C	MIRb	SINE/MIR	(140)	128	47	4125281
13	12.1	0.0	3.5	chr9	98255746	98255774	(40138943)	+	(GCCAC)n	Simple_repeat	1	29	(0)	4126182
346	29.6	9.4	0.8	chr9	98903991	98904116	(39490601)	C	MIR3	SINE/MIR	(54)	154	17	4127463
13	19.8	0.0	6.5	chr9	100775138	100775183	(37619534)	+	(CCCTGCT)n	Simple_repeat	1	46	(0)	4130682
30	23.5	0.0	0.0	chr9	101028886	101028950	(37365767)	+	(CA)n	Simple_repeat	1	65	(0)	4131062
1376	15.1	21.5	0.9	chr9	104143996	104144333	(34250384)	+	MER70-int	LTR/ERVL	3347	3755	(1268)	4135293
1302	16.3	5.8	0.0	chr9	104144332	104144558	(34250159)	C	MER70-int	LTR/ERVL	(906)	4117	3877	4135294
438	22.6	2.8	10.9	chr9	104144555	104144673	(34250044)	+	MER70-int	LTR/ERVL	3781	3889	(1134)	4135293
20	24.4	2.6	3.8	chr9	105656220	105656297	(32738420)	+	(GGC)n	Simple_repeat	1	80	(0)	4137861
230	28.6	5.1	0.0	chr9	107282734	107282789	(31111928)	C	MIR	SINE/MIR	(181)	81	23	4140361
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
54	30.6	4.7	0.4	chr9	107638282	107638530	(30756187)	+	(CTCT)n	Simple_repeat	1	259	(0)	4141236
207	27.9	1.6	4.7	chr9	109037296	109037359	(29357358)	C	L2b	LINE/L2	(3)	3372	3311	4143692
355	22.7	1.6	11.2	chr9	109037363	109037393	(29357324)	C	L2a	LINE/L2	(0)	3426	3397	4143693
2389	11.5	8.4	2.2	chr9	109037394	109037794	(29356923)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4143694
304	30.2	5.6	4.5	chr9	109250144	109250320	(29144397)	C	MIR3	SINE/MIR	(16)	192	14	4144106
185	29.4	0.0	0.0	chr9	109498650	109498700	(28896017)	C	MIRc	SINE/MIR	(207)	61	11	4144624
384	27.4	11.5	4.2	chr9	109498742	109499030	(28895687)	+	L2a	LINE/L2	2933	3245	(181)	4144625
879	27.0	11.5	4.7	chr9	109499034	109499437	(28895280)	C	L2a	LINE/L2	(0)	3426	2992	4144626
18	3.8	0.0	3.5	chr9	109499842	109499870	(28894847)	+	(GCCCG)n	Simple_repeat	1	29	(0)	4144628
233	21.5	21.4	0.0	chr9	110039340	110039460	(28355257)	C	L2a	LINE/L2	(1597)	1822	1669	4145558
413	25.0	7.5	2.4	chr9	110039443	110039569	(28355148)	C	MIR	SINE/MIR	(128)	134	1	4145563
2858	20.6	11.8	4.6	chr9	111549780	111550651	(26844066)	C	L1MB4	LINE/L1	(1416)	1399	53	4148081
24	18.9	4.4	1.4	chr9	112750624	112750691	(25644026)	+	(CCTC)n	Simple_repeat	1	71	(0)	4150443
347	34.5	10.7	4.2	chr9	112758004	112758330	(25636387)	+	L2	LINE/L2	1432	1788	(1631)	4150453
1712	11.8	0.0	18.1	chr9	112758331	112758695	(25636022)	C	AluSz	SINE/Alu	(13)	299	1	4150456
428	24.0	9.9	9.0	chr9	112783238	112783448	(25611269)	+	MIRb	SINE/MIR	36	248	(20)	4150516
219	30.9	15.9	4.0	chr9	112784592	112784790	(25609927)	C	MIRc	SINE/MIR	(12)	256	30	4150517
828	28.2	7.0	3.1	chr9	112924312	112924666	(25470051)	+	MamGypLTR3	LTR/Gypsy	98	467	(427)	4150744
297	31.3	3.4	0.9	chr9	113360341	113360456	(25034261)	C	MER117	DNA/hAT-Charlie	(0)	197	79	4151512
2226	6.6	1.3	6.3	chr9	113376347	113376664	(25018053)	C	AluSg	SINE/Alu	(7)	303	2	4151545
446	32.5	8.7	0.4	chr9	113958195	113958426	(24436291)	+	MIR	SINE/MIR	2	254	(8)	4152700
15	9.4	5.6	2.6	chr9	114504708	114504743	(23889974)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	4153793
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
793	24.0	3.8	0.0	chr9	115286873	115287051	(23107666)	+	MIR	SINE/MIR	45	230	(32)	4155344
16268	9.7	1.4	2.3	chr9	115841518	115844476	(22550241)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	4156260
3365	11.8	1.8	6.0	chr9	116843058	116843375	(21551342)	+	L1PA16	LINE/L1	5612	5936	(230)	4158199
185	20.4	12.5	2.0	chr9	118521983	118522032	(19872685)	+	MIR3	SINE/MIR	150	205	(3)	4161358
228	26.1	15.4	0.0	chr9	119349783	119349870	(19044847)	+	MIRc	SINE/MIR	13	116	(152)	4162844
1398	25.1	6.7	4.7	chr9	120221930	120222355	(18172362)	+	LTR16	LTR/ERVL	4	438	(0)	4164613
1974	16.5	0.0	2.5	chr9	120889457	120889772	(17504945)	+	AluJb	SINE/Alu	3	310	(2)	4165914
48	9.8	6.6	2.6	chr9	120889773	120889878	(17504839)	+	A-rich	Low_complexity	1	113	(0)	4165915
19	13.4	2.3	2.3	chr9	120889890	120889932	(17504785)	+	(CTTGGA)n	Simple_repeat	1	44	(0)	4165916
216	22.1	0.0	6.2	chr9	120889942	120890035	(17504682)	+	MIRc	SINE/MIR	120	241	(27)	4165917
388	27.4	1.7	4.9	chr9	120890033	120890155	(17504562)	+	L2b	LINE/L2	3257	3375	(0)	4165918
5684	11.2	4.2	1.3	chr9	121386217	121387089	(17007628)	C	MER4D1	LTR/ERV1	(0)	900	1	4166893
492	29.1	3.9	10.4	chr9	121462738	121463093	(16931624)	C	L4_C_Mam	LINE/RTE-X	(147)	4991	4660	4167018
215	20.4	1.8	1.8	chr9	121463205	121463259	(16931458)	C	L2	LINE/L2	(625)	2794	2740	4167019
2156	10.8	4.0	0.0	chr9	121492864	121493150	(16901567)	+	AluSz	SINE/Alu	1	299	(13)	4167094
518	27.2	5.6	1.7	chr9	121493349	121493520	(16901197)	+	MIRc	SINE/MIR	36	214	(54)	4167095
737	24.0	8.1	1.5	chr9	121589722	121589916	(16804801)	+	LTR16A	LTR/ERVL	132	340	(111)	4167324
82	0.0	0.0	0.0	chr9	121589917	121589989	(16804728)	+	(TCCCT)n	Simple_repeat	1	73	(0)	4167325
12	14.8	2.3	6.8	chr9	121645281	121645323	(16749394)	+	G-rich	Low_complexity	1	44	(0)	4167450
196	27.8	6.2	0.0	chr9	121645522	121645603	(16749114)	+	MIRb	SINE/MIR	85	172	(96)	4167451
208	19.2	9.9	5.2	chr9	121650567	121650643	(16744074)	+	MIR3	SINE/MIR	66	146	(62)	4167462
14	14.7	0.0	3.1	chr9	121651595	121651626	(16743091)	+	GA-rich	Low_complexity	1	32	(0)	4167463
410	30.9	2.1	2.1	chr9	122133959	122134100	(16260617)	+	MIRb	SINE/MIR	60	201	(67)	4168369
2474	7.1	0.0	0.0	chr9	122136560	122136853	(16257864)	C	AluSg	SINE/Alu	(15)	295	2	4168377
707	30.0	7.1	5.5	chr9	122136854	122136888	(16257829)	C	L1ME3G	LINE/L1	(799)	5325	5300	4168376
244	22.6	3.1	0.0	chr9	122214604	122214665	(16180052)	C	MIRb	SINE/MIR	(89)	179	116	4168565
357	24.3	24.1	2.0	chr9	122216085	122216235	(16178482)	+	MIRb	SINE/MIR	26	220	(48)	4168570
367	21.7	7.7	7.1	chr9	122216383	122216536	(16178181)	C	MIR3	SINE/MIR	(8)	200	46	4168571
708	35.3	4.1	4.0	chr9	122218320	122218876	(16175841)	+	L2a	LINE/L2	2504	3061	(358)	4168579
353	31.6	11.7	0.5	chr9	122346316	122346528	(16048189)	+	L2a	LINE/L2	3120	3359	(67)	4168862
733	13.2	0.0	3.3	chr9	122346541	122346661	(16048056)	C	AluJr	SINE/Alu	(76)	236	120	4168863
188	28.0	0.0	0.0	chr9	122346664	122346713	(16048004)	+	L2b	LINE/L2	3301	3350	(25)	4168864
17	15.6	0.0	0.0	chr9	122372094	122372122	(16022595)	+	(TG)n	Simple_repeat	1	29	(0)	4168923
12	15.8	0.0	3.3	chr9	123267135	123267164	(15127553)	+	(CACCA)n	Simple_repeat	1	30	(0)	4170356
35	0.0	0.0	0.0	chr9	124007577	124007606	(14387111)	+	(AC)n	Simple_repeat	1	30	(0)	4171696
24	30.5	1.7	3.3	chr9	124011383	124011501	(14383216)	+	(CTCCCTC)n	Simple_repeat	1	121	(0)	4171699
41	6.1	0.0	0.0	chr9	124011714	124011764	(14382953)	+	(CTC)n	Simple_repeat	1	51	(0)	4171700
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
554	34.2	6.0	0.5	chr9	124271453	124271672	(14123045)	C	MIRb	SINE/MIR	(15)	253	21	4172299
313	31.9	16.2	1.5	chr9	124291059	124291248	(14103469)	C	MIR	SINE/MIR	(0)	262	45	4172335
13	8.4	0.0	3.7	chr9	124453680	124453715	(13941002)	+	(CGCCC)n	Simple_repeat	1	34	(0)	4172610
54	26.1	2.8	4.0	chr9	124503990	124504205	(13890512)	+	GA-rich	Low_complexity	1	222	(0)	4172702
18	10.7	4.8	2.3	chr9	124504859	124504900	(13889817)	+	(CGCCTCC)n	Simple_repeat	1	44	(0)	4172704
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
17	8.2	0.0	0.0	chr9	124869371	124869396	(13525321)	+	(GGC)n	Simple_repeat	1	26	(0)	4173431
2136	9.8	2.1	0.0	chr9	124941994	124942279	(13452438)	+	AluSp	SINE/Alu	1	292	(21)	4173564
15	12.0	0.0	0.0	chr9	125746549	125746575	(12648142)	+	(CGG)n	Simple_repeat	1	27	(0)	4175276
61	9.4	0.0	0.0	chr9	126082982	126083072	(12311645)	+	(TGTG)n	Simple_repeat	1	91	(0)	4175820
187	30.4	6.4	1.0	chr9	126222256	126222358	(12172359)	C	MIR3	SINE/MIR	(32)	176	68	4176070
653	29.6	3.8	4.2	chr9	126662065	126662325	(11732392)	+	MIRb	SINE/MIR	8	267	(1)	4176784
234	31.3	8.5	5.4	chr9	126674715	126674954	(11719763)	+	L2a	LINE/L2	2644	2891	(528)	4176807
340	27.1	8.1	4.0	chr9	126675236	126675412	(11719305)	+	L1ME4b	LINE/L1	699	883	(9)	4176809
478	29.9	4.8	0.0	chr9	126683743	126683899	(11710818)	C	MIR	SINE/MIR	(92)	170	6	4176828
17	19.0	2.4	0.0	chr9	126781890	126781931	(11612786)	+	G-rich	Low_complexity	1	43	(0)	4177042
376	33.5	12.1	3.5	chr9	127467883	127468259	(10926458)	C	L2b	LINE/L2	(41)	3334	2921	4178275
213	20.5	3.3	4.3	chr9	127468295	127468386	(10926331)	C	L2b	LINE/L2	(627)	2792	2702	4178275
460	28.7	5.9	0.0	chr9	127468500	127468642	(10926075)	+	L1MC4	LINE/L1	4821	4972	(1174)	4178276
212	38.3	0.0	0.0	chr9	127537745	127537825	(10856892)	C	MIRc	SINE/MIR	(108)	160	80	4178435
240	34.4	2.0	1.0	chr9	127570083	127570179	(10824538)	C	L3	LINE/CR1	(94)	4005	3908	4178508
1967	9.4	8.9	0.0	chr9	127698906	127699181	(10695536)	C	AluSz	SINE/Alu	(9)	303	1	4178821
17	10.7	0.0	0.0	chr9	127877746	127877775	(10516942)	+	(AGGG)n	Simple_repeat	1	30	(0)	4179227
347	33.3	6.7	1.6	chr9	127877885	127878067	(10516650)	C	MIRc	SINE/MIR	(12)	256	64	4179228
200	27.2	11.5	2.1	chr9	127955629	127955722	(10438995)	C	L2c	LINE/L2	(245)	3142	3039	4179404
229	17.8	5.7	0.0	chr9	128128872	128128949	(10265768)	C	MIR1_Amn	SINE/MIR	(84)	184	96	4179817
17	13.6	5.8	3.6	chr9	128251261	128251312	(10143405)	+	(TCCTCCAT)n	Simple_repeat	1	55	(0)	4180077
538	2.7	0.0	19.8	chr9	128340076	128340166	(10054551)	C	tRNA-Arg-AGA	tRNA	(3)	73	1	4180290
198	27.5	6.4	3.8	chr9	128343801	128343906	(10050811)	C	L2c	LINE/L2	(32)	3355	3247	4180295
273	27.4	1.7	9.6	chr9	128343904	128344028	(10050689)	+	L2b	LINE/L2	3254	3368	(7)	4180296
221	30.3	11.6	6.8	chr9	128344068	128344230	(10050487)	C	L2c	LINE/L2	(184)	3203	3032	4180295
2028	16.3	0.3	0.7	chr9	128344236	128344541	(10050176)	+	AluSz	SINE/Alu	1	305	(7)	4180297
317	26.0	7.7	1.0	chr9	128688587	128688683	(9706034)	C	MIR3	SINE/MIR	(57)	151	48	4181102
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
15	17.3	5.2	4.9	chr9	128882181	128882238	(9512479)	+	(CGGC)n	Simple_repeat	1	61	(0)	4181567
362	30.8	7.4	7.4	chr9	128937316	128937638	(9457079)	+	L2c	LINE/L2	3055	3377	(10)	4181693
14	11.5	2.2	8.7	chr9	129167179	129167223	(9227494)	+	(CTCC)n	Simple_repeat	1	46	(0)	4182220
309	27.4	13.6	3.3	chr9	129167295	129167451	(9227266)	C	MIRb	SINE/MIR	(22)	186	19	4182221
918	28.8	6.4	7.5	chr9	129167460	129167591	(9227126)	+	L2a	LINE/L2	2912	3034	(392)	4182222
2179	11.9	1.3	0.6	chr9	129167592	129167902	(9226815)	C	AluSq2	SINE/Alu	(0)	313	1	4182223
22	19.5	1.6	3.2	chr9	129402484	129402545	(8992172)	+	(CCTCCT)n	Simple_repeat	1	63	(0)	4182736
14	20.4	4.8	4.6	chr9	129550177	129550238	(8844479)	+	(CCGCG)n	Simple_repeat	1	65	(0)	4183103
12	20.8	5.9	5.6	chr9	129550239	129550244	(8844473)	+	(CCG)n	Simple_repeat	1	72	(0)	4183104
347	26.1	10.4	2.1	chr9	129550777	129550917	(8843800)	+	Charlie4z	DNA/hAT-Charlie	8	161	(6)	4183105
13	22.7	3.6	3.5	chr9	129665551	129665605	(8729112)	+	G-rich	Low_complexity	1	57	(0)	4183353
695	23.5	2.6	9.8	chr9	129719516	129719704	(8675013)	+	MIR	SINE/MIR	22	194	(68)	4183481
2305	12.8	0.0	0.0	chr9	129719705	129720016	(8674701)	+	AluSz	SINE/Alu	1	312	(0)	4183482
1674	22.2	7.8	1.9	chr9	130223373	130223845	(8170872)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	3	4184599
355	36.0	7.4	0.0	chr9	130342925	130343124	(8051593)	+	MIR	SINE/MIR	36	251	(11)	4184840
237	27.5	0.0	0.0	chr9	130482459	130482527	(7912190)	C	MER117	DNA/hAT-Charlie	(127)	70	2	4185096
17	23.4	1.7	3.3	chr9	130660240	130660298	(7734419)	+	G-rich	Low_complexity	1	60	(0)	4185534
12	8.4	0.0	6.9	chr9	130663968	130663996	(7730721)	+	(CCCCT)n	Simple_repeat	1	29	(0)	4185537
16	16.9	9.7	1.5	chr9	130664041	130664102	(7730615)	+	GA-rich	Low_complexity	1	68	(0)	4185538
20	21.3	4.9	3.5	chr9	130681524	130681604	(7713113)	+	(GCGCAC)n	Simple_repeat	1	85	(0)	4185574
2532	5.9	0.3	0.0	chr9	130712063	130712365	(7682352)	C	AluSp	SINE/Alu	(9)	304	1	4185637
232	29.7	2.2	4.2	chr9	130936878	130936972	(7457745)	C	L2c	LINE/L2	(211)	3176	3084	4186041
1712	14.2	5.2	5.2	chr9	131311501	131311540	(7083177)	C	AluJr	SINE/Alu	(0)	312	283	4186790
319	38.0	2.1	2.1	chr9	131645868	131646012	(6748705)	+	MIRc	SINE/MIR	117	261	(7)	4187416
289	25.3	4.4	0.0	chr9	131774265	131774351	(6620366)	+	MLT1O	LTR/ERVL-MaLR	115	205	(337)	4187684
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
2308	8.6	0.0	0.0	chr9	132114644	132114933	(6279784)	C	AluSc	SINE/Alu	(18)	291	2	4188256
57	11.6	0.0	0.0	chr9	132162524	132162617	(6232100)	+	(GT)n	Simple_repeat	1	94	(0)	4188354
18	13.9	0.0	0.0	chr9	132168545	132168577	(6226140)	+	(GGGA)n	Simple_repeat	1	33	(0)	4188360
201	29.7	7.5	0.0	chr9	132414426	132414499	(5980218)	+	MIRb	SINE/MIR	189	268	(0)	4188848
48	0.0	0.0	0.0	chr9	132414500	132414540	(5980177)	+	(CA)n	Simple_repeat	1	41	(0)	4188849
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
653	20.8	15.9	0.0	chr9	132939800	132939958	(5454759)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	4189752
2295	8.2	0.7	0.0	chr9	133029696	133029986	(5364731)	+	AluSx1	SINE/Alu	1	293	(19)	4189954
189	24.3	0.0	0.0	chr9	133030177	133030213	(5364504)	+	L2a	LINE/L2	3367	3403	(23)	4189955
1665	17.2	0.3	3.6	chr9	133065422	133065564	(5329153)	+	AluJr	SINE/Alu	1	142	(170)	4190006
14	22.1	4.9	3.1	chr9	133238583	133238643	(5156074)	+	G-rich	Low_complexity	1	64	(0)	4190280
2032	7.8	10.9	0.0	chr9	133667195	133667465	(4727252)	C	AluSx1	SINE/Alu	(8)	304	1	4190923
223	32.5	8.6	0.0	chr9	133994684	133994800	(4399917)	+	MIRc	SINE/MIR	89	216	(52)	4191375
821	18.3	0.0	0.0	chr9	133994823	133994953	(4399764)	+	FLAM_C	SINE/Alu	1	131	(12)	4191376
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
83	40.9	0.0	1.0	chr9	135169815	135170222	(3224495)	+	(TGTG)n	Simple_repeat	1	408	(0)	4192855
208	29.1	2.5	1.2	chr9	135174770	135174849	(3219868)	C	L2c	LINE/L2	(16)	3359	3279	4192866
63	10.8	4.0	1.6	chr9	135364951	135365045	(3029672)	+	GA-rich	Low_complexity	28	126	(0)	4193103
315	34.7	4.2	3.8	chr9	135851538	135851798	(2542919)	C	L1ME3Cz	LINE/L1	(198)	799	538	4193689
503	26.7	11.6	4.2	chr9	135852083	135852488	(2542229)	C	L1MEd	LINE/L1	(740)	5422	4997	4193690
354	9.4	0.0	1.5	chr9	135972326	135972390	(2422327)	C	L1MB3	LINE/L1	(7)	6176	6113	4193867
23	10.0	0.0	0.0	chr9	136323439	136323492	(2071225)	+	(TG)n	Simple_repeat	1	54	(0)	4194267
13	14.8	0.0	3.1	chr9	136572379	136572410	(1822307)	+	(CAGAGC)n	Simple_repeat	1	32	(0)	4194507
205	15.8	6.6	3.4	chr9	136611597	136611655	(1783062)	+	MIRb	SINE/MIR	115	175	(93)	4194546
559	32.8	13.5	2.5	chr9	136611800	136612257	(1782460)	+	L1MB8	LINE/L1	5527	6059	(119)	4194547
1189	10.2	0.0	0.6	chr9	136779795	136779951	(1614766)	+	AluSg7	SINE/Alu	141	296	(13)	4194803
1201	15.5	16.8	3.4	chr9	136794995	136795284	(1599433)	+	MLT1B	LTR/ERVL-MaLR	7	357	(33)	4194814
32	0.0	2.9	0.0	chr9	136795285	136795318	(1599399)	+	(TTGTTTTT)n	Simple_repeat	1	35	(0)	4194815
2134	10.8	1.1	0.0	chr9	136795319	136795596	(1599121)	C	AluSx1	SINE/Alu	(31)	281	1	4194816
445	29.6	9.7	1.6	chr9	136807190	136807501	(1587216)	C	MER74B	LTR/ERVL	(10)	612	273	4194829
2344	6.4	0.0	0.0	chr9	136986840	136987119	(1407598)	+	AluYi6_4d	SINE/Alu	30	309	(2)	4195076
380	27.8	17.7	5.3	chr9	136987309	136987439	(1407278)	+	L2b	LINE/L2	2755	2886	(533)	4195077
1619	15.0	0.0	0.0	chr9	137029672	137029904	(1364813)	C	AluJb	SINE/Alu	(14)	298	66	4195130
2201	11.1	1.3	0.0	chr9	137046811	137047108	(1347609)	C	AluSx	SINE/Alu	(9)	303	2	4195149
180	33.2	10.1	0.5	chr9	137254506	137254693	(1140024)	C	L2c	LINE/L2	(230)	3157	2950	4195390
2036	12.4	0.3	0.0	chr9	137680192	137680482	(714235)	+	AluSz6	SINE/Alu	1	292	(20)	4196025
1606	21.8	5.6	3.3	chr9	137680806	137681227	(713490)	C	MER70A	LTR/ERVL	(39)	433	2	4196026
3912	18.6	4.8	3.9	chr9	137731600	137732763	(661954)	C	LTR2752	LTR/ERV1	(0)	1263	15	4196090
30	17.4	4.2	0.0	chrX	373908	373978	(155666917)	+	(CTCCT)n	Simple_repeat	1	74	(0)	4358467
870	27.9	6.0	0.3	chrX	374716	375013	(155665882)	C	L1MC1	LINE/L1	(138)	6195	5880	4358468
139	22.6	0.0	1.3	chrX	1248023	1248340	(154792555)	+	G-rich	Low_complexity	1	318	(0)	4360528
27	0.0	0.0	0.0	chrX	1248398	1248423	(154792472)	+	(GGGGA)n	Simple_repeat	1	26	(0)	4360529
38	4.7	0.0	0.0	chrX	1248431	1248474	(154792421)	+	(GAGAG)n	Simple_repeat	1	44	(0)	4360530
1971	10.5	1.1	2.5	chrX	1381929	1382248	(154658647)	C	AluSx3	SINE/Alu	(0)	311	1	4360865
256	12.2	0.0	0.0	chrX	1382249	1382289	(154658606)	C	Alu	SINE/Alu	(92)	41	1	4360866
18	0.0	0.0	0.0	chrX	8091795	8091814	(147949081)	+	(T)n	Simple_repeat	1	20	(0)	4372643
18	0.0	0.0	3.7	chrX	10050595	10050621	(145990274)	+	(GGCTG)n	Simple_repeat	1	27	(0)	4375862
1648	22.4	7.8	2.3	chrX	10055010	10055443	(145985452)	+	MLT1D	LTR/ERVL-MaLR	1	460	(45)	4375868
497	21.7	1.7	0.0	chrX	10173676	10173790	(145867105)	+	MER5A1	DNA/hAT-Charlie	50	166	(0)	4376062
855	22.2	2.5	0.0	chrX	10173907	10174100	(145866795)	C	MER20	DNA/hAT-Charlie	(7)	212	14	4376063
230	28.3	3.6	0.9	chrX	10174228	10174334	(145866561)	C	MLT1K	LTR/ERVL-MaLR	(351)	244	135	4376064
456	31.0	12.0	0.5	chrX	13165724	13165937	(142874958)	C	MIRb	SINE/MIR	(0)	268	27	4380725
291	26.0	9.1	10.8	chrX	13166005	13166207	(142874688)	+	L2b	LINE/L2	3185	3383	(4)	4380726
1733	26.5	3.5	2.2	chrX	15938150	15938605	(140102290)	+	LTR16B2	LTR/ERVL	1	462	(0)	4385231
22	14.1	7.6	2.8	chrX	15947599	15947664	(140093231)	+	(TTA)n	Simple_repeat	1	71	(0)	4385251
390	37.4	0.5	1.0	chrX	16511975	16512171	(139528724)	C	MLT1K-int	LTR/ERVL-MaLR	(1089)	298	103	4386132
2385	8.8	0.0	7.0	chrX	17046146	17046475	(138994420)	C	AluSg	SINE/Alu	(3)	307	1	4387235
1773	23.4	8.1	3.0	chrX	17495741	17496243	(138544652)	C	LTR33A_	LTR/ERVL	(0)	531	1	4387953
18	14.7	0.0	0.0	chrX	17522491	17522520	(138518375)	+	(C)n	Simple_repeat	1	30	(0)	4388000
355	28.2	0.0	1.2	chrX	18394917	18395002	(137645893)	+	LTR33	LTR/ERVL	273	357	(158)	4389433
1694	23.7	12.2	1.7	chrX	18395005	18395578	(137645317)	C	LTR41	LTR/ERVL	(0)	768	80	4389434
272	30.1	11.4	11.1	chrX	19289895	19290522	(136750373)	+	L2c	LINE/L2	2682	3345	(42)	4391074
8623	10.8	2.6	1.2	chrX	19861458	19862737	(136178158)	C	HSMAR2	DNA/TcMar-Mariner	(3)	1299	2	4392097
1031	28.7	10.2	4.7	chrX	19862738	19863198	(136177697)	+	LTR82B	LTR/ERVL	57	614	(216)	4392096
1453	27.1	9.7	2.8	chrX	20538354	20539024	(135501871)	+	Kanga2_a	DNA/TcMar-Tc2	141	862	(26)	4393333
812	27.7	0.8	6.8	chrX	20539139	20539342	(135501553)	+	MIR	SINE/MIR	1	198	(64)	4393334
2122	10.6	3.3	1.4	chrX	20539343	20539635	(135501260)	C	AluSz	SINE/Alu	(13)	299	1	4393335
2099	19.6	19.3	3.3	chrX	21813343	21814005	(134226890)	C	LTR50	LTR/ERVL	(1)	794	1	4394966
981	28.8	8.9	5.9	chrX	23105688	23106405	(132934490)	C	L2a	LINE/L2	(18)	3408	2690	4397015
14	19.8	0.0	7.4	chrX	25015887	25015940	(131024955)	+	(TGCCCGC)n	Simple_repeat	1	54	(0)	4400471
8681	18.1	1.4	4.3	chrX	25604234	25607352	(130433543)	C	L1PA16	LINE/L1	(3724)	3590	400	4401346
3132	18.8	3.8	3.3	chrX	33906804	33907491	(122133404)	+	LTR8	LTR/ERV1	1	691	(0)	4413147
5253	10.2	6.5	1.8	chrX	33907804	33908659	(122132236)	+	MER4D1	LTR/ERV1	1	900	(0)	4413148
13	14.3	2.3	6.7	chrX	37349563	37349606	(118691289)	+	G-rich	Low_complexity	1	45	(0)	4417288
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
894	13.0	6.1	0.7	chrX	39614076	39614230	(116426665)	+	MER5A1	DNA/hAT-Charlie	1	164	(2)	4420847
604	31.7	6.0	5.5	chrX	39616820	39617296	(116423599)	C	L2	LINE/L2	(853)	2566	2087	4420855
2340	14.7	0.3	0.5	chrX	39780213	39780603	(116260292)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	4421168
990	29.2	4.5	7.4	chrX	39780604	39780649	(116260246)	C	MLT1J	LTR/ERVL-MaLR	(456)	56	13	4421167
334	12.7	14.5	0.0	chrX	39816989	39817059	(116223836)	C	MER103C	DNA/hAT-Charlie	(107)	190	108	4421248
206	26.4	7.8	11.7	chrX	39817078	39817197	(116223698)	C	L2b	LINE/L2	(229)	3146	3032	4421241
193	25.4	0.0	7.3	chrX	40089164	40089231	(115951664)	C	L2a	LINE/L2	(6)	3420	3358	4421752
389	24.6	3.9	5.4	chrX	40089221	40089349	(115951546)	C	MIRb	SINE/MIR	(92)	176	50	4421753
14	10.0	2.8	5.4	chrX	40175332	40175367	(115865528)	+	(CGCGCC)n	Simple_repeat	1	37	(0)	4421890
1067	24.5	8.8	4.3	chrX	40531871	40532216	(115508679)	+	L1ME3	LINE/L1	5734	6096	(66)	4422647
2113	17.1	6.8	2.5	chrX	41604219	41604657	(114436238)	+	MLT1C	LTR/ERVL-MaLR	6	464	(3)	4424724
2250	11.8	5.1	1.1	chrX	45454979	45455338	(110585557)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4430815
3366	11.3	11.6	0.2	chrX	45455341	45456214	(110584681)	+	THE1C-int	LTR/ERVL-MaLR	3	976	(655)	4430815
1969	13.0	11.3	1.2	chrX	46550017	46550351	(109490544)	+	MER83C	LTR/ERV1	1	373	(0)	4432340
53	2.0	0.0	0.0	chrX	49235827	49235876	(106805019)	+	(AC)n	Simple_repeat	1	50	(0)	4437757
1252	29.0	3.5	5.1	chrX	49892289	49892861	(106148034)	+	L1MCb	LINE/L1	3	566	(5479)	4438538
422	21.0	0.0	1.0	chrX	49892954	49893054	(106147841)	+	L1MCb	LINE/L1	571	670	(5375)	4438538
2066	12.5	7.6	1.7	chrX	50725453	50725810	(105315085)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4439759
11713	9.6	1.4	0.4	chrX	50725811	50727426	(105313469)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	4439759
5738	17.8	7.4	2.2	chrX	51022984	51024129	(105016766)	C	LTR49-int	LTR/ERV1	(5119)	1212	2	4440180
2424	16.5	13.1	0.2	chrX	51024132	51024648	(105016247)	C	LTR49	LTR/ERV1	(0)	595	2	4440180
6011	21.7	3.4	1.2	chrX	51146290	51149582	(104891313)	C	L1M1	LINE/L1	(2876)	4686	1325	4440293
356	36.7	6.9	1.5	chrX	54483612	54483940	(101556955)	+	L2b	LINE/L2	2363	2710	(709)	4445907
533	29.9	9.7	4.3	chrX	54640384	54640753	(101400142)	C	L1ME4c	LINE/L1	(144)	686	295	4446206
231	36.0	2.4	1.2	chrX	54640946	54641111	(101399784)	C	L2-1_AMi	LINE/L2	(624)	611	444	4446207
46	28.5	0.0	0.7	chrX	55488508	55488644	(100552251)	+	G-rich	Low_complexity	1	137	(0)	4447195
13	26.8	0.0	4.0	chrX	56759477	56759526	(99281369)	+	(TTTCTC)n	Simple_repeat	1	50	(0)	4448500
710	23.5	14.2	0.9	chrX	65463470	65463701	(90577194)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	192	4452352
244	36.3	1.2	3.1	chrX	65463730	65463891	(90577004)	C	L1M3d	LINE/L1	(5496)	635	477	4452353
704	32.2	0.8	7.5	chrX	68848514	68848792	(87192103)	C	MIR	SINE/MIR	(0)	262	3	4457070
935	30.5	0.4	0.8	chrX	68848887	68849144	(87191751)	+	MIR	SINE/MIR	4	260	(2)	4457071
704	20.9	3.9	0.0	chrX	68883986	68884133	(87156762)	+	MER5A1	DNA/hAT-Charlie	1	154	(12)	4457147
584	12.4	1.1	0.0	chrX	68884146	68884234	(87156661)	+	MER5A	DNA/hAT-Charlie	1	90	(99)	4457148
296	34.5	0.7	4.7	chrX	69060602	69060750	(86980145)	C	L3	LINE/CR1	(20)	4079	3937	4457463
15	12.4	5.7	0.0	chrX	69503711	69503745	(86537150)	+	(GGTG)n	Simple_repeat	1	37	(0)	4458294
4232	19.4	5.2	2.9	chrX	69546439	69547914	(86492981)	+	MER52A	LTR/ERV1	1	1755	(0)	4458374
1400	25.5	15.4	3.4	chrX	72253992	72254557	(83786338)	+	L2a	LINE/L2	2770	3426	(0)	4462986
365	31.2	7.1	1.9	chrX	74431639	74431798	(81609097)	+	MIRc	SINE/MIR	71	239	(29)	4465625
12	13.6	6.8	4.3	chrX	74924493	74924536	(81116359)	+	(CCATGC)n	Simple_repeat	1	47	(0)	4466272
6774	22.2	6.3	3.0	chrX	81933488	81935077	(74105818)	+	MSTB1-int	LTR/ERVL-MaLR	1	1645	(6)	4473368
3731	25.6	1.7	4.8	chrX	87679886	87680719	(68360176)	C	MSTD-int	LTR/ERVL-MaLR	(801)	934	129	4479399
4297	20.3	7.2	0.9	chrX	96979804	96980645	(59060250)	C	LTR1D1	LTR/ERV1	(0)	899	1	4489955
2593	21.1	1.8	11.3	chrX	103210458	103211127	(52829768)	C	MER21A	LTR/ERVL	(117)	814	210	4498282
2778	12.6	7.9	0.9	chrX	103211158	103211605	(52829290)	+	MER66C	LTR/ERV1	61	542	(13)	4498283
1907	23.6	4.3	2.0	chrX	103233806	103234393	(52806502)	+	L1MC4	LINE/L1	6488	7089	(953)	4498320
183	28.6	8.0	8.7	chrX	103362714	103362851	(52678044)	+	L2a	LINE/L2	3000	3136	(239)	4498508
12	15.7	2.6	5.0	chrX	103919305	103919343	(52121552)	+	(CTTCCC)n	Simple_repeat	1	40	(0)	4499330
279	25.3	22.0	2.9	chrX	103919453	103919627	(52121268)	C	MIRb	SINE/MIR	(14)	254	37	4499331
185	34.7	9.0	2.4	chrX	104136696	104136819	(51904076)	+	L2c	LINE/L2	3136	3268	(119)	4499612
308	28.2	11.8	0.3	chrX	104400304	104400436	(51640459)	C	MIR	SINE/MIR	(109)	159	4	4500126
199	28.4	13.6	2.9	chrX	104400437	104400472	(51640423)	+	MIR3	SINE/MIR	106	154	(54)	4500127
3442	12.1	2.3	3.8	chrX	105495782	105496364	(50544531)	+	MER4B	LTR/ERV1	1	574	(36)	4501616
12	10.0	0.0	0.0	chrX	105821651	105821672	(50219223)	+	(AATG)n	Simple_repeat	1	22	(0)	4502078
15	19.8	0.0	8.2	chrX	105822730	105822790	(50218105)	+	(TCCTCCT)n	Simple_repeat	1	61	(0)	4502080
24	5.8	2.6	2.6	chrX	106693401	106693438	(49347457)	+	(GA)n	Simple_repeat	1	39	(0)	4503044
21	13.9	2.0	3.9	chrX	107716852	107716902	(48323993)	+	(GGCT)n	Simple_repeat	1	52	(0)	4504706
45	5.9	0.0	0.0	chrX	111270390	111270443	(44770452)	+	(CTG)n	Simple_repeat	1	54	(0)	4509591
1924	18.4	3.2	11.9	chrX	113956815	113957369	(42083526)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	4513451
3120	9.4	3.9	0.2	chrX	114059022	114059467	(41981428)	C	LTR2	LTR/ERV1	(0)	463	1	4513602
240	28.4	2.9	9.9	chrX	119731926	119732187	(36308708)	C	L2-3_Crp	LINE/L2	(1009)	1087	845	4521689
461	19.3	1.8	9.2	chrX	119732249	119732344	(36308551)	+	MER45R	DNA/hAT-Tip100	6	91	(1490)	4521690
29	12.6	4.8	1.5	chrX	125204472	125204534	(30836361)	+	GA-rich	Low_complexity	1	66	(0)	4529800
13	4.7	0.0	4.2	chrX	125205370	125205393	(30835502)	+	(TCCC)n	Simple_repeat	1	24	(0)	4529802
33	0.0	3.1	0.0	chrX	130330751	130330782	(25710113)	+	(TG)n	Simple_repeat	1	33	(0)	4536366
400	21.9	15.6	0.9	chrX	131288158	131288272	(24752623)	+	MIRb	SINE/MIR	111	245	(23)	4537840
14	0.0	4.2	4.0	chrX	133415707	133415730	(22625165)	+	(CTC)n	Simple_repeat	1	25	(0)	4540875
532	31.2	3.6	1.8	chrX	133445159	133445377	(22595518)	+	MIRb	SINE/MIR	20	242	(26)	4540943
1247	22.9	10.3	17.5	chrX	133965149	133965697	(22075198)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	4541874
748	29.9	7.2	1.6	chrX	136529806	136530063	(19510832)	C	L2a	LINE/L2	(275)	3151	2887	4546128
36	0.0	2.7	0.0	chrX	136767835	136767871	(19273024)	+	(GCA)n	Simple_repeat	1	38	(0)	4546544
345	27.3	11.3	0.0	chrX	136768542	136768651	(19272244)	C	MIR3	SINE/MIR	(50)	158	35	4546545
213	23.0	14.4	8.9	chrX	136768687	136768810	(19272085)	C	Tigger19b	DNA/TcMar-Tigger	(236)	314	183	4546546
18	4.8	0.0	0.0	chrX	143636103	143636124	(12404771)	+	(A)n	Simple_repeat	1	22	(0)	4556823
14	26.9	6.0	2.2	chrX	148500339	148500422	(7540473)	+	(TCCCGCG)n	Simple_repeat	1	89	(0)	4563409
99	16.8	2.3	1.8	chrX	148500602	148500743	(7540152)	+	(GCC)n	Simple_repeat	1	182	(37)	4563410
12	18.3	6.7	2.1	chrX	148500744	148500788	(7540107)	+	(GCCA)n	Simple_repeat	1	48	(0)	4563411
15	19.4	0.0	4.4	chrX	149540682	149540726	(6500169)	+	(CCCTTC)n	Simple_repeat	1	45	(0)	4564765
286	30.4	3.8	11.2	chrX	149963234	149963469	(6077426)	C	L2c	LINE/L2	(13)	3374	3139	4565213
22	18.7	0.0	2.2	chrX	150567306	150567350	(5473545)	+	(AT)n	Simple_repeat	1	45	(0)	4566104
2045	20.3	3.2	7.6	chrX	150925978	150926286	(5114609)	+	MLT1D	LTR/ERVL-MaLR	204	503	(2)	4566737
691	32.0	10.0	0.6	chrX	150934266	150934583	(5106312)	+	L3	LINE/CR1	3734	4084	(15)	4566761
219	29.0	1.6	0.0	chrX	150969360	150969421	(5071474)	C	L2b	LINE/L2	(5)	3370	3308	4566847
2334	7.7	0.0	1.0	chrX	150969693	150970003	(5070892)	+	AluSc	SINE/Alu	1	308	(1)	4566848
805	17.3	0.0	0.0	chrX	151396059	151396185	(4644710)	C	FLAM_C	SINE/Alu	(16)	127	1	4567570
184	32.2	1.7	4.2	chrX	151396294	151396413	(4644482)	C	MamRTE1	LINE/RTE-BovB	(54)	3758	3642	4567571
737	25.4	6.0	4.8	chrX	153520517	153520764	(2520131)	C	MIR	SINE/MIR	(0)	262	12	4570362
1143	16.1	8.6	3.4	chrX	153845976	153846239	(2194656)	C	MER67C	LTR/ERV1	(432)	279	1	4570818
13	19.3	0.0	5.1	chrX	153958332	153958370	(2082525)	+	(CTC)n	Simple_repeat	1	39	(0)	4570988
13	30.1	0.0	2.0	chrX	154380978	154381028	(1659867)	+	(TCC)n	Simple_repeat	1	51	(0)	4571762
16	14.9	0.0	0.0	chrX	154381265	154381295	(1659600)	+	(GTGGGG)n	Simple_repeat	1	31	(0)	4571763
253	25.3	3.5	2.4	chrX	154482366	154482450	(1558445)	+	L2c	LINE/L2	3281	3366	(21)	4571922
521	25.3	8.0	1.6	chrX	154482491	154482735	(1558160)	C	L2	LINE/L2	(1026)	2393	2132	4571923
236	31.1	6.2	0.7	chrX	155612308	155612443	(428452)	C	MIR3	SINE/MIR	(7)	201	58	4573529
1088	21.7	0.0	0.0	chrY	19078245	19078442	(38148973)	+	AluJr	SINE/Alu	23	220	(92)	4599184