15	15.5	7.0	0.0	chr1	1116237	1116279	(247840143)	+	G-rich	Low_complexity	1	46	(0)	1382
13	14.9	5.1	2.4	chr1	1232410	1232448	(247723974)	+	(CCGCGC)n	Simple_repeat	1	41	(0)	1499
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
2274	12.6	0.0	1.3	chr1	1609533	1609849	(247346573)	+	AluSq	SINE/Alu	1	313	(0)	2050
368	19.1	4.5	0.0	chr1	1609966	1610049	(247346373)	+	MER65D	LTR/ERV1	1	88	(443)	2051
400	36.0	3.6	4.0	chr1	1610095	1610181	(247346241)	+	MER65D	LTR/ERV1	181	266	(207)	2051
15	15.0	7.3	3.4	chr1	1616209	1616263	(247340159)	+	(CCGTGC)n	Simple_repeat	1	59	(0)	2067
6624	22.2	0.4	2.4	chr1	3803436	3803669	(245152753)	C	HERVK13-int	LTR/ERVK	(1169)	6947	6733	4376
3295	26.6	0.7	0.7	chr1	3803659	3805070	(245151352)	C	HERVK13-int	LTR/ERVK	(2024)	6092	3756	4376
1253	26.4	11.8	1.0	chr1	5856575	5856988	(243099434)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	7376
2500	20.1	7.7	1.1	chr1	6537023	6537840	(242418582)	+	L1MB4	LINE/L1	4633	5352	(791)	8408
14	16.2	0.0	0.0	chr1	7771353	7771380	(241185042)	+	(CGC)n	Simple_repeat	1	28	(0)	10295
4092	8.5	1.8	0.2	chr1	8122631	8123171	(240833251)	C	MER41A	LTR/ERV1	(4)	550	1	10968
1017	30.8	8.9	2.4	chr1	8123172	8123386	(240833036)	C	L1MC4	LINE/L1	(242)	7800	7553	10967
546	24.3	13.2	0.7	chr1	9929833	9929977	(239026445)	+	MIR3	SINE/MIR	32	197	(11)	14655
2334	9.3	0.0	1.3	chr1	9941914	9942215	(239014207)	C	AluSx	SINE/Alu	(13)	299	2	14686
206	30.0	8.5	7.3	chr1	9942224	9942374	(239014048)	+	L2c	LINE/L2	3214	3366	(21)	14683
2249	4.8	1.8	1.1	chr1	10427627	10427899	(238528523)	C	AluSp	SINE/Alu	(37)	276	2	15772
450	24.8	12.8	7.5	chr1	10427989	10428202	(238528220)	+	MIR	SINE/MIR	13	239	(23)	15773
181	16.0	0.0	5.7	chr1	11100092	11100144	(237856278)	C	MIRc	SINE/MIR	(51)	217	168	17029
531	17.8	8.2	0.0	chr1	11100177	11100277	(237856145)	C	FLAM_A	SINE/Alu	(22)	120	11	17030
827	15.3	11.6	2.5	chr1	11100310	11100466	(237855956)	+	AluJb	SINE/Alu	115	287	(25)	17031
2240	10.7	0.7	1.3	chr1	11785723	11786032	(237170390)	C	AluSz	SINE/Alu	(4)	308	1	18459
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
24	17.6	2.0	8.9	chr1	11926270	11926368	(237030054)	+	(CGCC)n	Simple_repeat	1	101	(0)	18747
12	23.8	3.0	5.9	chr1	11926473	11926538	(237029884)	+	G-rich	Low_complexity	1	68	(0)	18748
450	21.4	4.8	1.0	chr1	12015075	12015173	(236941249)	C	L2a	LINE/L2	(1)	3425	3323	18956
2134	11.7	2.0	0.0	chr1	12015178	12015476	(236940946)	+	AluSg	SINE/Alu	1	305	(5)	18957
465	20.5	2.4	13.5	chr1	12075463	12075654	(236880768)	C	MLT1D	LTR/ERVL-MaLR	(274)	231	62	19088
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
3108	11.8	0.2	0.4	chr1	14777711	14778169	(234178253)	C	MER41B	LTR/ERV1	(155)	479	22	23836
1434	19.7	8.3	5.2	chr1	14778170	14778576	(234177846)	C	MER72	LTR/ERV1	(269)	402	1	23837
820	23.2	2.9	1.9	chr1	15261116	15261322	(233695100)	C	MIR	SINE/MIR	(15)	247	39	24883
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
259	35.7	14.5	1.8	chr1	15953666	15953882	(233002540)	+	MIRb	SINE/MIR	4	252	(16)	26391
1936	15.9	0.9	1.8	chr1	16516738	16517077	(232439345)	C	MER1B	DNA/hAT-Charlie	(2)	337	1	27682
3174	16.6	6.1	7.0	chr1	16517078	16517227	(232439195)	C	LTR8A	LTR/ERV1	(565)	162	2	27681
614	21.0	9.0	6.3	chr1	16517243	16517559	(232438863)	C	MER31B	LTR/ERV1	(21)	445	1	27683
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
2912	20.4	2.6	5.7	chr1	18421927	18422180	(230534242)	+	LTR49-int	LTR/ERV1	181	429	(7778)	31615
3179	14.4	6.5	12.3	chr1	18422181	18422855	(230533567)	+	MER41B	LTR/ERV1	2	634	(0)	31617
3629	15.5	0.2	0.2	chr1	18443197	18443753	(230512669)	C	MER41D	LTR/ERV1	(0)	557	1	31662
760	32.3	4.9	6.5	chr1	18443754	18443867	(230512555)	+	L2a	LINE/L2	2747	2845	(574)	31661
2072	14.9	0.3	0.0	chr1	18443868	18444169	(230512253)	+	AluSz6	SINE/Alu	1	303	(9)	31663
328	24.6	5.9	5.9	chr1	18479533	18479692	(230476730)	+	MER102a	DNA/hAT-Charlie	26	185	(156)	31755
236	28.1	14.0	0.7	chr1	20190254	20190389	(228766033)	+	L2a	LINE/L2	3220	3376	(50)	35267
12	16.5	0.0	0.0	chr1	20190390	20190416	(228766006)	+	(AATG)n	Simple_repeat	1	27	(0)	35268
21	21.1	0.0	3.5	chr1	20633486	20633543	(228322879)	+	(CGG)n	Simple_repeat	1	58	(0)	36239
12	21.0	0.0	7.8	chr1	20633687	20633737	(228322685)	+	(GGCTCG)n	Simple_repeat	1	51	(0)	36240
529	27.8	11.5	6.7	chr1	21631717	21631873	(227324549)	C	MIRc	SINE/MIR	(98)	170	2	38331
211	28.1	8.7	2.7	chr1	21632014	21632137	(227324285)	C	MIR3	SINE/MIR	(62)	146	10	38333
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
2017	9.4	0.0	0.4	chr1	21791927	21792182	(227164240)	+	AluY	SINE/Alu	1	255	(56)	38680
3255	15.4	3.0	4.9	chr1	21792183	21792255	(227164167)	C	MER41B	LTR/ERV1	(562)	72	1	38679
2405	10.1	0.0	0.0	chr1	21792385	21792690	(227163732)	C	AluSx	SINE/Alu	(6)	306	1	38681
11119	13.4	7.7	0.8	chr1	22483098	22485524	(226470898)	C	L1MC1	LINE/L1	(465)	6043	3414	40266
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
379	22.6	9.8	3.3	chr1	23569311	23569504	(225386918)	+	MIRc	SINE/MIR	3	207	(1)	42758
16	21.7	0.0	0.0	chr1	23778331	23778362	(225178060)	+	(C)n	Simple_repeat	1	32	(0)	43345
12	11.3	6.9	0.0	chr1	23778451	23778479	(225177943)	+	(GAGGC)n	Simple_repeat	1	31	(0)	43346
3735	15.8	11.5	1.2	chr1	25232782	25233512	(223722910)	+	LTR8B	LTR/ERV1	2	817	(3)	46664
20	16.5	5.4	1.7	chr1	25431020	25431075	(223525347)	+	(GCG)n	Simple_repeat	1	59	(0)	47148
16	23.9	2.0	0.0	chr1	25431353	25431401	(223525021)	+	G-rich	Low_complexity	1	50	(0)	47149
211	17.5	2.4	0.0	chr1	26126236	26126275	(222830147)	C	MIRc	SINE/MIR	(18)	250	210	48623
906	23.6	14.7	0.7	chr1	26128035	26128327	(222828095)	+	L1MEc	LINE/L1	36	370	(6030)	48628
15	16.7	5.0	0.0	chr1	26128363	26128402	(222828020)	+	(TTTCT)n	Simple_repeat	1	42	(0)	48629
403	30.4	16.9	0.2	chr1	27542523	27542734	(221413688)	C	MIRb	SINE/MIR	(4)	258	8	52004
2542	7.7	0.0	0.6	chr1	27830195	27830507	(221125915)	C	AluSz	SINE/Alu	(0)	312	2	52639
280	24.8	11.0	5.7	chr1	28260824	28260981	(220695441)	C	MIR	SINE/MIR	(1)	267	100	53687
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
182	30.6	0.0	0.0	chr1	30756942	30756990	(218199432)	C	MIR3	SINE/MIR	(104)	104	56	58993
224	25.4	0.0	4.5	chr1	30768649	30768714	(218187708)	C	L2a	LINE/L2	(211)	3176	3114	59013
477	28.2	3.0	5.8	chr1	30768785	30768957	(218187465)	C	MIRc	SINE/MIR	(53)	215	48	59021
276	27.8	1.8	0.9	chr1	30769533	30769641	(218186781)	+	MER102c	DNA/hAT-Charlie	213	322	(9)	59022
505	19.0	25.6	0.0	chr1	30778294	30778456	(218177966)	+	MIR	SINE/MIR	21	239	(23)	59041
667	27.5	4.6	11.8	chr1	30778486	30778840	(218177582)	+	MLT1K	LTR/ERVL-MaLR	101	428	(167)	59042
428	26.7	5.0	0.2	chr1	30778961	30779093	(218177329)	C	MIR	SINE/MIR	(42)	166	28	59043
661	31.6	3.1	3.1	chr1	30779191	30779412	(218177010)	+	MIRb	SINE/MIR	47	268	(0)	59044
2473	8.6	0.0	0.3	chr1	31070861	31071174	(217885248)	C	AluSq2	SINE/Alu	(0)	313	1	59701
2927	19.7	2.2	12.8	chr1	31171162	31171364	(217785058)	+	LTR8	LTR/ERV1	1	192	(499)	60029
2376	7.8	0.0	0.3	chr1	31171365	31171660	(217784762)	C	AluY	SINE/Alu	(15)	296	2	60030
3954	5.1	2.3	0.0	chr1	31482871	31483342	(217473080)	C	LTR2B	LTR/ERV1	(0)	483	1	60754
598	28.6	14.3	10.5	chr1	31483347	31484023	(217472399)	+	LTR84b	LTR/ERVL	54	757	(0)	60755
29	7.9	0.0	0.0	chr1	31938062	31938102	(217018320)	+	(CGG)n	Simple_repeat	1	41	(0)	61649
13	20.9	4.3	2.1	chr1	31938121	31938144	(217018278)	+	(CGGCG)n	Simple_repeat	1	46	(0)	61650
16	0.0	0.0	0.0	chr1	31938145	31938164	(217018258)	+	(CGG)n	Simple_repeat	1	20	(0)	61651
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
13	14.1	4.7	4.4	chr1	34985166	34985208	(213971214)	+	(CCGCT)n	Simple_repeat	1	45	(0)	67785
455	31.4	3.4	0.6	chr1	35809713	35809885	(213146537)	+	MIR	SINE/MIR	75	252	(10)	69525
242	19.8	3.4	7.5	chr1	35930088	35930180	(213026242)	C	L2a	LINE/L2	(1)	3425	3337	69779
188	33.3	4.9	0.0	chr1	35930475	35930552	(213025870)	C	L2	LINE/L2	(528)	2891	2810	69780
2168	6.3	5.7	0.4	chr1	37922431	37922698	(211033724)	+	AluY	SINE/Alu	2	284	(27)	73717
26	0.0	3.5	0.0	chr1	37922699	37922727	(211033695)	+	(AAAAT)n	Simple_repeat	1	30	(0)	73718
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
764	28.4	3.2	0.0	chr1	38815221	38815459	(210140963)	+	MIR	SINE/MIR	2	248	(14)	75383
1846	14.9	0.4	2.1	chr1	39025943	39026230	(209930192)	C	AluJb	SINE/Alu	(29)	283	1	75886
681	32.5	1.5	0.5	chr1	40059793	40059984	(208896438)	C	MIR3	SINE/MIR	(12)	196	3	78038
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
15	25.3	2.6	5.1	chr1	43707772	43707848	(205248574)	+	G-rich	Low_complexity	1	79	(0)	84748
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
764	30.3	15.6	9.0	chr1	44531691	44532393	(204424029)	C	L3	LINE/CR1	(14)	4085	3328	86211
380	30.4	9.3	6.5	chr1	44532403	44532631	(204423791)	C	MIRb	SINE/MIR	(10)	258	23	86212
292	32.1	0.0	0.0	chr1	44532694	44532774	(204423648)	C	MIRb	SINE/MIR	(20)	248	168	86213
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
24	15.2	0.0	3.6	chr1	44775763	44775817	(204180605)	+	G-rich	Low_complexity	1	55	(0)	86689
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
3740	13.7	15.2	0.7	chr1	45410833	45411262	(203545160)	+	LTR8B	LTR/ERV1	1	524	(296)	87941
7350	13.7	4.1	5.2	chr1	45573441	45574886	(203381536)	C	MER61-int	LTR/ERV1	(0)	5217	3663	88324
470	20.9	10.5	0.7	chr1	45802553	45802746	(203153676)	+	MIRc	SINE/MIR	39	268	(0)	88817
621	25.6	8.6	7.5	chr1	46304685	46304879	(202651543)	C	MIR	SINE/MIR	(66)	196	4	89754
586	16.9	0.8	3.1	chr1	46315689	46315816	(202640606)	+	L1MB8	LINE/L1	5825	5949	(229)	89776
246	31.2	13.8	1.8	chr1	46315875	46315988	(202640434)	C	L2b	LINE/L2	(6)	3369	3240	89785
397	27.6	17.1	2.4	chr1	46316014	46316244	(202640178)	+	L2a	LINE/L2	3113	3422	(4)	89786
14	13.1	0.0	0.0	chr1	50960185	50960210	(197996212)	+	(CGAG)n	Simple_repeat	1	26	(0)	97705
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
438	23.6	11.5	0.8	chr1	51441139	51441262	(197515160)	+	MIRc	SINE/MIR	130	268	(0)	98670
283	26.9	11.0	0.0	chr1	51519716	51519818	(197436604)	C	MIR3	SINE/MIR	(109)	159	45	98836
335	37.6	8.8	5.9	chr1	51519964	51520251	(197436171)	+	L2b	LINE/L2	3059	3355	(20)	98837
507	29.7	14.7	2.9	chr1	52365191	52365731	(196590691)	C	L2b	LINE/L2	(13)	3362	2745	100698
272	29.2	1.4	0.0	chr1	52703541	52703612	(196252810)	C	MIR3	SINE/MIR	(68)	140	68	101511
1018	13.4	0.0	0.0	chr1	52703632	52703773	(196252649)	+	AluSc8	SINE/Alu	148	289	(22)	101512
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
2504	12.6	5.2	0.9	chr1	54893126	54893551	(194062871)	C	MER65A	LTR/ERV1	(0)	445	1	106122
256	31.4	9.7	6.0	chr1	54893552	54893580	(194062842)	C	L1ME4a	LINE/L1	(459)	5665	5646	106121
883	13.3	1.5	0.0	chr1	54893598	54893725	(194062697)	+	AluJo	SINE/Alu	2	131	(181)	106123
25	17.2	2.5	6.0	chr1	55217379	55217459	(193738963)	+	(AATA)n	Simple_repeat	1	83	(0)	106643
521	33.1	4.1	1.1	chr1	55217694	55217974	(193738448)	C	UCON86	LINE/L2	(322)	360	71	106644
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
601	18.9	14.5	6.9	chr1	67923019	67923337	(181033085)	C	LTR54	LTR/ERV1	(112)	386	1	129820
14094	14.3	2.0	2.9	chr1	67923338	67925906	(181030516)	C	MER57A-int	LTR/ERV1	(392)	5795	3251	129818
13	8.8	0.0	3.9	chr1	86461422	86461447	(162494975)	+	(AAG)n	Simple_repeat	1	26	(0)	155636
2658	11.1	2.7	0.0	chr1	86461466	86461862	(162494560)	C	MER61E	LTR/ERV1	(161)	408	1	155637
189	26.9	12.3	2.1	chr1	109389198	109389316	(139567106)	C	MIRb	SINE/MIR	(15)	253	104	188505
227	34.6	0.0	2.4	chr1	109826876	109826958	(139129464)	C	LTR85c	LTR/Gypsy?	(648)	175	95	189147
397	28.6	0.0	1.6	chr1	109826897	109827017	(139129405)	C	LTR104_Mam	LTR/Gypsy	(1323)	186	68	189148
436	35.1	11.5	3.2	chr1	109894812	109895442	(139060980)	+	L2b	LINE/L2	2691	3374	(1)	189238
11	21.6	0.0	4.9	chr1	109895452	109895492	(139060930)	+	G-rich	Low_complexity	1	41	(0)	189239
184	33.2	13.7	2.4	chr1	109895519	109895814	(139060608)	C	L2c	LINE/L2	(359)	3060	2726	189231
4051	10.7	0.2	0.0	chr1	110031079	110031631	(138924791)	C	MER41A	LTR/ERV1	(0)	554	1	189448
181	17.6	0.0	0.0	chr1	110031638	110031671	(138924751)	C	MIRc	SINE/MIR	(106)	162	129	189449
269	35.1	10.0	2.3	chr1	110880518	110880692	(138075730)	C	MIR3	SINE/MIR	(3)	205	16	190855
320	29.1	13.2	7.4	chr1	110880717	110881013	(138075409)	C	L2c	LINE/L2	(44)	3343	3027	190856
17	15.3	0.0	0.0	chr1	110962295	110962323	(137994099)	+	A-rich	Low_complexity	1	29	(0)	190948
201	27.3	23.9	3.4	chr1	110962560	110962737	(137993685)	C	MIR	SINE/MIR	(0)	262	37	190949
1106	29.4	9.5	7.4	chr1	111467382	111467928	(137488494)	C	L1MEd	LINE/L1	(6118)	1158	607	191565
1871	22.6	16.8	2.2	chr1	111467929	111468507	(137487915)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	191568
467	36.6	4.3	6.8	chr1	111470951	111471729	(137484693)	+	L2b	LINE/L2	2621	3375	(0)	191572
2222	15.0	8.0	2.8	chr1	112902167	112902510	(136053912)	C	LTR54B	LTR/ERV1	(134)	364	1	194017
1425	22.2	2.5	8.3	chr1	112902511	112902700	(136053722)	+	MER21C	LTR/ERVL	495	747	(191)	194019
299	26.7	11.8	2.7	chr1	113658771	113658993	(135297429)	+	L1ME4c	LINE/L1	556	801	(29)	195318
36	24.2	4.7	8.2	chr1	116678778	116679056	(132277366)	+	GA-rich	Low_complexity	1	292	(0)	200094
1083	26.4	14.0	3.6	chr1	116682866	116683323	(132273099)	+	MLT1L	LTR/ERVL-MaLR	3	532	(78)	200100
2195	11.7	0.0	1.0	chr1	116687976	116688274	(132268148)	+	AluSx1	SINE/Alu	1	296	(16)	200112
2331	9.9	0.0	0.0	chr1	116688275	116688578	(132267844)	+	AluSz	SINE/Alu	1	304	(8)	200113
362	30.4	0.0	0.0	chr1	118964413	118964504	(129991918)	C	MIRb	SINE/MIR	(122)	146	55	203422
256	32.7	15.8	1.0	chr1	118964556	118964657	(129991765)	+	L2c	LINE/L2	3260	3379	(8)	203423
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
40	22.7	0.9	1.9	chr1	145977990	145978095	(102978327)	+	GA-rich	Low_complexity	1	107	(0)	211866
1188	16.7	3.4	15.8	chr1	145991760	145992094	(102964328)	+	AluJo	SINE/Alu	2	293	(19)	211891
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
312	22.4	1.6	11.2	chr1	149637049	149637182	(99319240)	+	AluSz	SINE/Alu	2	122	(190)	217502
15	17.4	2.9	0.0	chr1	150321483	150321516	(98634906)	+	(GCG)n	Simple_repeat	1	35	(0)	218779
1810	10.8	0.4	0.0	chr1	155306973	155307212	(93649210)	C	AluSx3	SINE/Alu	(70)	241	1	227711
456	11.5	3.3	4.4	chr1	155307213	155307272	(93649150)	+	MER51B	LTR/ERV1	318	377	(0)	227710
432	10.3	0.0	0.0	chr1	155307273	155307340	(93649082)	C	L1MB3	LINE/L1	(250)	5933	5866	227712
2126	11.9	4.9	0.3	chr1	155307341	155307693	(93648729)	+	MER41A	LTR/ERV1	1	370	(184)	227713
540	23.5	4.2	0.7	chr1	156105608	156105744	(92850678)	+	Arthur1B	DNA/hAT-Tip100	6	147	(1078)	229493
311	21.9	0.0	13.7	chr1	156105802	156105836	(92850586)	+	MER81	DNA/hAT-Blackjack	33	61	(53)	229494
2295	5.4	0.0	5.4	chr1	156105837	156106149	(92850273)	+	AluY	SINE/Alu	1	296	(15)	229495
23	21.7	2.5	3.7	chr1	160262403	160262482	(88693940)	+	(CCACCG)n	Simple_repeat	1	82	(0)	235489
13	32.5	3.7	2.4	chr1	160460647	160460728	(88495694)	+	A-rich	Low_complexity	1	85	(0)	235797
180	26.6	6.0	2.5	chr1	160460730	160460810	(88495612)	C	OldhAT1	DNA/hAT-Ac	(306)	2542	2459	235798
2761	17.8	3.4	2.0	chr1	160538968	160539518	(88416904)	C	MER68	LTR/ERVL	(0)	563	5	235894
187	23.3	17.5	2.0	chr1	160541613	160541761	(88414661)	C	L2b	LINE/L2	(296)	3091	2915	235897
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
660	0.0	0.0	0.0	chr1	161531113	161531184	(87425238)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	237673
12	10.0	0.0	0.0	chr1	161531389	161531410	(87425012)	+	(TTCC)n	Simple_repeat	1	22	(0)	237674
189	32.4	9.9	0.7	chr1	167826311	167826447	(81129975)	C	MIR3	SINE/MIR	(53)	155	5	247379
255	31.0	7.3	4.7	chr1	167826612	167826815	(81129607)	C	L2a	LINE/L2	(5)	3382	3191	247380
228	30.0	11.1	0.0	chr1	167826834	167826913	(81129509)	C	L2a	LINE/L2	(309)	3066	2977	247380
470	23.8	18.4	0.7	chr1	169312043	169312194	(79644228)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	305	249768
680	24.3	11.1	0.0	chr1	169312280	169312431	(79643991)	C	MLT1H2	LTR/ERVL-MaLR	(317)	172	2	249768
13	5.3	0.0	0.0	chr1	169367760	169367779	(79588643)	+	(CAC)n	Simple_repeat	1	20	(0)	249846
13963	13.3	3.4	4.4	chr1	172924294	172926737	(76029685)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1	254881
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
3934	7.6	5.0	0.2	chr1	179363083	179363609	(69592813)	C	MER41A	LTR/ERV1	(0)	554	1	264713
266	27.4	5.9	5.0	chr1	181042894	181042993	(67913429)	C	L2b	LINE/L2	(5)	3370	3270	267358
3896	12.8	4.1	0.7	chr1	181173937	181174423	(67781999)	+	MER41B	LTR/ERV1	1	509	(125)	267598
650	26.4	9.4	2.0	chr1	182791588	182791881	(66164541)	C	Charlie19a	DNA/hAT-Charlie	(47)	339	22	270064
427	33.2	15.2	3.9	chr1	182928616	182929101	(66027321)	C	L2c	LINE/L2	(825)	2594	2044	270278
358	29.5	7.3	9.2	chr1	182929141	182929390	(66027032)	+	L2c	LINE/L2	3092	3336	(51)	270279
332	30.7	9.3	2.4	chr1	194858660	194858829	(54097593)	+	HAL1ME	LINE/L1	807	989	(1476)	286681
1571	15.3	7.5	0.0	chr1	197939182	197939442	(51016980)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	67	290541
3319	9.3	0.2	4.6	chr1	197939443	197939843	(51016579)	C	L1PA13	LINE/L1	(2)	6161	5781	290542
280	27.0	6.2	6.2	chr1	197944535	197944664	(51011758)	C	LTR88a	LTR/Gypsy?	(427)	389	260	290547
1447	23.5	8.8	9.3	chr1	198079256	198079956	(50876466)	C	MER61E	LTR/ERV1	(0)	779	14	290741
420	24.6	10.3	5.0	chr1	200642340	200642540	(48313882)	+	Charlie18a	DNA/hAT-Charlie	130	342	(0)	294702
24	20.0	4.2	5.0	chr1	201539287	201539381	(47417041)	+	(GCGCG)n	Simple_repeat	1	99	(0)	296223
12	9.6	5.4	5.1	chr1	202164480	202164516	(46791906)	+	(TGCACAA)n	Simple_repeat	1	39	(0)	297411
2319	18.6	5.6	4.2	chr1	203599930	203600455	(45355967)	C	MER41A	LTR/ERV1	(20)	534	1	299917
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
2421	9.7	0.6	0.0	chr1	205176196	205176506	(43779916)	+	AluSp	SINE/Alu	1	313	(0)	302934
228	27.1	5.5	1.2	chr1	207029722	207029807	(41926615)	C	L2c	LINE/L2	(5)	3382	3293	306104
280	16.7	0.0	0.0	chr1	207312022	207312069	(41644353)	+	LTR8	LTR/ERV1	1	48	(772)	306468
2885	21.2	2.8	4.9	chr1	207312071	207312761	(41643661)	+	LTR8	LTR/ERV1	16	691	(0)	306468
17	20.3	2.4	0.0	chr1	209675275	209675315	(39281107)	+	(TCC)n	Simple_repeat	1	42	(0)	310028
1793	17.5	11.1	3.1	chr1	212478011	212478420	(36478002)	C	LTR54B	LTR/ERV1	(44)	454	2	314582
407	27.8	3.1	2.3	chr1	212478475	212478603	(36477819)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	433	314585
2125	17.9	5.9	2.8	chr1	213055079	213055573	(35900849)	C	L1ME1	LINE/L1	(18)	6161	5651	315644
187	31.3	7.5	2.9	chr1	220272863	220272964	(28683458)	+	L2c	LINE/L2	3160	3266	(121)	325957
403	27.3	7.7	0.0	chr1	220272994	220273136	(28683286)	C	L2a	LINE/L2	(0)	3426	3272	325958
2406	18.4	4.9	6.0	chr1	221962160	221962675	(26993747)	C	LTR54	LTR/ERV1	(0)	510	1	328437
211	40.0	2.8	0.9	chr1	222906192	222906297	(26050125)	+	MamSINE1	SINE/tRNA-RTE	115	222	(68)	329880
3930	8.7	0.4	1.8	chr1	222906370	222906919	(26049503)	+	MER41A	LTR/ERV1	4	545	(9)	329881
3965	7.5	1.1	3.5	chr1	223732186	223732753	(25223669)	C	MER41A	LTR/ERV1	(0)	554	1	331128
2722	16.7	2.9	5.4	chr1	223732754	223733021	(25223401)	C	LTR75_1	LTR/ERV1	(264)	282	4	331127
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
2377	11.9	0.0	0.0	chr1	226090761	226091072	(22865350)	C	AluSx1	SINE/Alu	(0)	312	1	335182
282	32.5	1.6	0.0	chr1	226091094	226091213	(22865209)	+	MLT1K	LTR/ERVL-MaLR	146	267	(328)	335183
22	22.6	2.4	4.7	chr1	228082878	228082977	(20873445)	+	G-rich	Low_complexity	1	97	(0)	338274
226	24.1	15.7	3.5	chr1	228456596	228456767	(20499655)	C	MamRep1151	LTR?	(69)	640	444	338741
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
36	37.1	0.0	0.0	chr1	234617785	234617909	(14338513)	+	(AT)n	Simple_repeat	1	125	(0)	348176
27	8.1	0.0	0.0	chr1	234617915	234617954	(14338468)	+	(ATATATAC)n	Simple_repeat	1	40	(0)	348177
2316	10.3	0.0	0.6	chr1	234873935	234874245	(14082177)	C	AluSx3	SINE/Alu	(0)	311	3	348583
678	25.1	13.2	11.4	chr1	234874246	234874326	(14082096)	+	L2c	LINE/L2	3314	3387	(0)	348582
222	28.3	11.7	7.0	chr1	234874713	234874826	(14081596)	C	L3	LINE/CR1	(12)	4087	3968	348584
2289	18.3	2.5	8.8	chr1	234986547	234987003	(13969419)	+	LTR54	LTR/ERV1	75	510	(0)	348779
2151	11.4	0.0	2.9	chr1	235050663	235050833	(13905589)	+	AluSq2	SINE/Alu	137	299	(14)	348914
14	27.3	0.0	3.6	chr1	236567962	236568017	(12388405)	+	(TGAA)n	Simple_repeat	1	56	(0)	351880
2729	20.4	9.0	0.7	chr1	246142102	246142773	(2813649)	C	MER44C	DNA/TcMar-Tigger	(0)	733	1	367012
399	17.3	17.4	9.5	chr1	246152793	246152939	(2803483)	+	MIR	SINE/MIR	102	262	(0)	367027
2194	19.4	6.4	13.9	chr1	247367537	247367831	(1588591)	C	LTR49-int	LTR/ERV1	(5852)	479	204	369022
1608	16.7	1.9	2.2	chr1	247367833	247367906	(1588516)	+	AluJb	SINE/Alu	1	74	(238)	369034
4117	13.4	1.1	1.3	chr1	247367907	247368541	(1587881)	+	MER41B	LTR/ERV1	1	634	(0)	369035
2544	20.9	6.5	4.8	chr1	247374735	247374850	(1581572)	+	LTR8A	LTR/ERV1	1	124	(603)	369051
4700	11.6	2.3	2.2	chr1	247374851	247375540	(1580882)	+	LTR8	LTR/ERV1	1	691	(0)	369052
16	17.7	1.7	6.8	chr1	247857488	247857545	(1098877)	+	G-rich	Low_complexity	1	59	(0)	369730
181	26.2	3.0	5.8	chr10	3805349	3805417	(129992005)	C	AmnSINE1	SINE/5S-Deu-L2	(394)	181	115	375583
241	22.8	0.0	3.4	chr10	3890734	3890792	(129906630)	+	MER102b	DNA/hAT-Charlie	283	339	(2)	375714
4359	11.5	1.4	0.6	chr10	3890830	3891458	(129905964)	+	MER41B	LTR/ERV1	1	634	(0)	375715
825	17.5	2.6	8.2	chr10	5461915	5462120	(128335302)	+	AluJo	SINE/Alu	113	306	(6)	377799
13	9.2	2.4	9.3	chr10	6163681	6163722	(127633700)	+	G-rich	Low_complexity	1	43	(0)	379017
3434	15.2	1.2	0.5	chr10	9825470	9826030	(123971392)	+	MER61E	LTR/ERV1	1	565	(4)	384785
472	25.5	10.1	2.4	chr10	16891767	16891931	(116905491)	+	MER20	DNA/hAT-Charlie	1	179	(40)	396533
364	26.1	10.3	3.2	chr10	21079381	21079527	(112717895)	C	MIRc	SINE/MIR	(71)	197	34	402944
960	21.8	4.8	3.8	chr10	23056422	23056688	(110740734)	C	MER39	LTR/ERV1	(0)	707	438	406198
1811	17.0	0.6	1.6	chr10	28385031	28385346	(105412076)	C	MER4D	LTR/ERV1	(11)	892	580	414972
445	15.4	0.0	9.1	chr10	28385398	28385528	(105411894)	C	MER4E1	LTR/ERV1	(589)	283	61	414973
1603	14.3	7.1	0.4	chr10	28385515	28385788	(105411634)	C	MER49	LTR/ERV1	(629)	294	1	414974
4044	10.9	4.7	1.6	chr10	30425042	30425534	(103371888)	C	MER41B	LTR/ERV1	(113)	521	1	418689
1125	21.8	7.7	8.2	chr10	30425535	30425843	(103371579)	+	MLT1A0	LTR/ERVL-MaLR	68	363	(2)	418688
26	10.1	1.6	6.5	chr10	31319141	31319201	(102478221)	+	G-rich	Low_complexity	1	62	(0)	420164
1620	20.4	0.0	0.0	chr10	43384359	43384632	(90412790)	+	AluJb	SINE/Alu	1	274	(38)	433396
1853	12.8	1.4	3.6	chr10	43418428	43418731	(90378691)	+	AluSz	SINE/Alu	8	304	(8)	433461
2327	6.0	0.7	1.0	chr10	43455012	43455310	(90342112)	C	AluY	SINE/Alu	(13)	298	1	433565
4627	10.8	1.1	0.2	chr10	45410801	45411428	(88385994)	C	MER41B	LTR/ERV1	(0)	634	1	436025
200	36.3	9.1	3.1	chr10	46018360	46018555	(87778867)	+	L3	LINE/CR1	3438	3646	(453)	437023
242	26.8	5.3	0.0	chr10	46018589	46018659	(87778763)	+	Plat_L3	LINE/CR1	3199	3273	(313)	437024
1466	21.4	11.5	5.4	chr10	49256988	49257452	(84539970)	C	LTR54B	LTR/ERV1	(1)	497	1	441661
328	19.1	3.5	5.6	chr10	60314764	60314852	(73482570)	C	MER102b	DNA/hAT-Charlie	(173)	168	82	456893
229	32.1	10.6	2.7	chr10	63437551	63437921	(70359501)	+	L2-3_Crp	LINE/L2	569	972	(1124)	461787
1636	28.0	11.1	5.1	chr10	63437923	63439064	(70358358)	+	L2a	LINE/L2	2199	3426	(0)	461786
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
1905	14.5	0.7	1.3	chr10	69410235	69410538	(64386884)	+	AluJo	SINE/Alu	1	302	(10)	471538
2666	13.0	0.2	0.2	chr10	69410648	69411056	(64386366)	+	LTR47B2	LTR/ERVL	1	409	(25)	471539
3229	19.9	3.4	2.5	chr10	70575722	70576429	(63220993)	C	MER72	LTR/ERV1	(0)	722	9	473743
471	26.1	3.2	0.0	chr10	70576435	70576553	(63220869)	+	LTR16B1	LTR/ERVL	309	431	(49)	473742
4718	9.7	1.9	0.0	chr10	70590200	70590821	(63206601)	C	MER41B	LTR/ERV1	(0)	634	1	473772
449	30.8	4.3	6.2	chr10	70661665	70661969	(63135453)	+	L2b	LINE/L2	3048	3346	(29)	473900
6445	7.6	1.2	0.4	chr10	70667727	70668686	(63128736)	+	MER11B	LTR/ERVK	1	1138	(128)	473917
905	14.3	0.0	2.5	chr10	70668680	70668837	(63128585)	+	LTR73	LTR/ERV1	419	572	(0)	473916
401	33.1	8.4	4.0	chr10	70668857	70669230	(63128192)	C	L2b	LINE/L2	(528)	2891	2500	473915
22	3.8	0.0	0.0	chr10	70673265	70673291	(63124131)	+	(GT)n	Simple_repeat	1	27	(0)	473927
557	30.2	5.8	10.0	chr10	71269657	71270067	(62527355)	C	L2a	LINE/L2	(79)	3347	2941	474909
391	33.5	7.7	1.0	chr10	71747537	71747729	(62049693)	+	MIRc	SINE/MIR	38	244	(24)	475832
386	24.6	6.5	2.3	chr10	71747731	71747863	(62049559)	C	MER117	DNA/hAT-Charlie	(0)	197	59	475833
13	13.1	0.0	7.7	chr10	71747959	71747997	(62049425)	+	G-rich	Low_complexity	1	39	(0)	475834
880	20.7	0.6	2.4	chr10	71749302	71749470	(62047952)	C	AluJr	SINE/Alu	(10)	302	137	475837
356	31.0	1.7	0.0	chr10	71753872	71753984	(62043438)	C	MIRb	SINE/MIR	(34)	234	120	475841
665	16.8	4.4	0.0	chr10	71755864	71755994	(62041428)	+	L1MB4	LINE/L1	6044	6180	(0)	475845
648	15.7	1.9	1.9	chr10	72276704	72276811	(61520611)	+	FLAM_A	SINE/Alu	21	128	(14)	476924
193	28.8	1.5	8.3	chr10	72276824	72276895	(61520527)	+	MIR3	SINE/MIR	113	179	(29)	476925
199	23.2	25.2	1.0	chr10	72277007	72277102	(61520320)	C	MER5A	DNA/hAT-Charlie	(0)	189	63	476926
193	25.0	7.3	2.6	chr10	72277085	72277162	(61520260)	+	L2	LINE/L2	65	146	(3273)	476927
295	25.5	4.7	5.6	chr10	72277272	72277379	(61520043)	C	MIRc	SINE/MIR	(44)	224	118	476928
2544	6.3	0.3	1.3	chr10	72296341	72296656	(61500766)	C	AluSp	SINE/Alu	(0)	313	1	476986
2463	7.2	1.0	0.0	chr10	72296720	72297023	(61500399)	+	AluSp	SINE/Alu	3	309	(4)	476987
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
3521	17.0	2.8	7.0	chr10	73742860	73743582	(60053840)	C	LTR8	LTR/ERV1	(0)	691	1	479874
17	20.8	2.3	0.0	chr10	73909594	73909637	(59887785)	+	(CCTT)n	Simple_repeat	1	45	(0)	480147
422	24.2	10.3	4.3	chr10	74026395	74026538	(59770884)	+	MIR	SINE/MIR	91	248	(14)	480420
795	26.5	7.3	1.7	chr10	74026609	74026842	(59770580)	C	MIRb	SINE/MIR	(7)	261	14	480422
1953	16.7	15.5	2.5	chr10	75209713	75209895	(58587527)	C	LTR54	LTR/ERV1	(331)	179	1	482668
575	29.6	16.3	4.9	chr10	77138424	77139114	(56658308)	+	L2a	LINE/L2	2622	3404	(22)	485406
15	14.2	3.0	10.1	chr10	79347551	79347617	(54449805)	+	(GCTGC)n	Simple_repeat	1	69	(0)	489469
222	20.7	8.4	4.0	chr10	79347828	79347922	(54449500)	+	MIR3	SINE/MIR	81	175	(93)	489470
202	31.8	2.9	0.0	chr10	100045973	100046038	(33751384)	+	MIR3	SINE/MIR	127	194	(14)	522605
233	20.4	2.0	0.0	chr10	100046256	100046304	(33751118)	+	MER39B	LTR/ERV1	224	273	(380)	522606
205	25.0	0.0	0.0	chr10	102132434	102132477	(31664945)	C	L2	LINE/L2	(385)	3034	2991	526365
7601	7.5	0.9	0.2	chr10	102454375	102455335	(31342087)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	526959
1092	13.5	2.9	4.5	chr10	102455336	102455452	(31341970)	C	AluJb	SINE/Alu	(66)	246	134	526958
897	14.5	0.0	0.0	chr10	102455453	102455576	(31341846)	C	AluJo	SINE/Alu	(188)	124	1	526960
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
496	20.9	0.7	7.6	chr10	123942005	123942149	(9855273)	+	LTR37A	LTR/ERV1	50	184	(242)	561136
3726	13.6	2.1	2.1	chr10	123942233	123942855	(9854567)	+	MER41B	LTR/ERV1	1	623	(11)	561137
343	13.3	11.8	0.0	chr11	207565	207624	(134878998)	C	AluSg4	SINE/Alu	(43)	267	200	573079
296	15.2	16.5	0.0	chr11	207580	207645	(134878977)	+	SVA_F	Retroposon/SVA	344	422	(953)	573080
315	32.2	9.5	1.5	chr11	208146	208419	(134878203)	+	L2b	LINE/L2	3021	3315	(60)	573081
4069	8.4	1.4	2.1	chr11	352134	352592	(134734030)	C	MER41A	LTR/ERV1	(99)	455	1	573310
2468	9.4	6.4	0.0	chr11	352761	353111	(134733511)	+	MER51B	LTR/ERV1	1	375	(2)	573314
572	10.6	0.0	0.0	chr11	355601	355685	(134730937)	C	MER41A	LTR/ERV1	(463)	91	7	573319
255	28.7	6.3	1.4	chr11	355690	355901	(134730721)	C	LTR40b	LTR/ERVL	(37)	425	203	573320
2260	8.4	0.3	0.3	chr11	449670	449956	(134636666)	+	AluSg	SINE/Alu	3	289	(21)	573405
4517	4.9	1.1	0.0	chr11	3509348	3509899	(131576723)	C	LTR6B	LTR/ERV1	(0)	558	1	577132
2298	11.1	0.0	0.3	chr11	3509900	3510216	(131576406)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	577133
21	21.5	2.4	5.8	chr11	6473843	6473926	(128612696)	+	(GCCCGC)n	Simple_repeat	1	86	(0)	581385
17	29.6	0.0	2.9	chr11	6611930	6611998	(128474624)	+	(CCCCG)n	Simple_repeat	1	69	(0)	581578
381	26.2	9.0	0.0	chr11	8688629	8688769	(126397853)	C	Charlie2a	DNA/hAT-Charlie	(1199)	1662	1508	584345
269	28.5	7.5	6.1	chr11	10858288	10858418	(124228204)	C	MER5A	DNA/hAT-Charlie	(0)	189	57	588255
733	30.0	8.1	3.5	chr11	14852659	14852779	(120233843)	+	L2a	LINE/L2	2721	2836	(583)	594579
813	17.6	0.8	0.0	chr11	14852780	14852910	(120233712)	+	FLAM_C	SINE/Alu	2	133	(10)	594580
2411	10.9	0.0	0.3	chr11	18691305	18691617	(116395005)	+	AluSx1	SINE/Alu	1	312	(0)	601037
3273	12.9	0.0	3.3	chr11	18691622	18692143	(116394479)	+	MER41B	LTR/ERV1	17	521	(113)	601026
291	25.0	7.3	0.0	chr11	33893372	33893447	(101193175)	+	L2b	LINE/L2	3275	3356	(19)	624237
37	5.7	0.0	4.9	chr11	44309714	44309774	(90776848)	+	(GCGGCT)n	Simple_repeat	1	61	(0)	639876
17	24.7	0.0	4.2	chr11	57792416	57792463	(77294159)	+	(TG)n	Simple_repeat	1	48	(0)	654475
18	22.7	0.0	0.0	chr11	57792559	57792578	(77294044)	+	(TTTA)n	Simple_repeat	1	20	(0)	654476
2005	8.5	0.8	0.0	chr11	57792579	57792825	(77293797)	C	AluSc	SINE/Alu	(59)	250	2	654477
1055	19.3	4.0	8.7	chr11	59546097	59546385	(75540237)	+	MLT1C	LTR/ERVL-MaLR	2	276	(191)	656934
1808	17.2	1.2	3.9	chr11	59953896	59954250	(75132372)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	1	657702
1472	12.7	5.6	0.8	chr11	61963770	61964006	(73122616)	+	AluSx3	SINE/Alu	49	297	(14)	661184
3480	17.1	1.7	7.2	chr11	62428724	62429455	(72657167)	C	LTR8	LTR/ERV1	(0)	691	1	662056
1688	10.6	5.9	13.9	chr11	62429522	62429852	(72656770)	+	AluSx	SINE/Alu	1	303	(9)	662057
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
446	22.2	7.5	0.0	chr11	62890123	62890221	(72196401)	C	MER77B	LTR/ERVL	(593)	107	1	663049
359	24.0	20.5	1.2	chr11	62890234	62890406	(72196216)	C	L2a	LINE/L2	(549)	2870	2656	663048
8930	1.6	0.0	0.0	chr11	63530314	63531281	(71555341)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	663822
1967	17.5	9.9	5.2	chr11	63531292	63531754	(71554868)	C	MER66C	LTR/ERV1	(67)	488	2	663823
12	29.5	1.6	3.2	chr11	64165782	64165842	(70920780)	+	(CCG)n	Simple_repeat	1	62	(0)	665097
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
238	19.4	7.5	0.0	chr11	65428532	65428593	(69658029)	+	MamRep4096	DNA/hAT-Tip100	68	134	(292)	667514
718	13.0	0.0	3.5	chr11	65476815	65476929	(69609693)	+	AluJr4	SINE/Alu	195	305	(7)	667618
332	31.3	6.2	8.0	chr11	65499662	65499925	(69586697)	+	L1M4c	LINE/L1	949	1207	(5177)	667663
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
13	31.5	0.0	3.2	chr11	65961813	65961874	(69124748)	+	(GGC)n	Simple_repeat	1	62	(0)	668549
12	29.2	4.7	3.4	chr11	65961917	65962001	(69124621)	+	(GCGGAA)n	Simple_repeat	1	89	(0)	668550
13	22.7	0.0	0.0	chr11	66617063	66617098	(68469524)	+	G-rich	Low_complexity	1	36	(0)	669932
12	18.1	0.0	3.0	chr11	67287251	67287283	(67799339)	+	(CAGG)n	Simple_repeat	1	33	(0)	671351
839	24.5	8.5	4.8	chr11	67563568	67563790	(67522832)	+	LTR49-int	LTR/ERV1	1015	1176	(7868)	671889
4033	6.0	4.5	0.0	chr11	67563791	67564319	(67522303)	+	MER41A	LTR/ERV1	1	554	(0)	671891
12	15.9	5.7	0.0	chr11	72752365	72752399	(62334223)	+	(ACCGCC)n	Simple_repeat	1	37	(0)	680518
16	18.0	0.0	2.5	chr11	72752465	72752504	(62334118)	+	G-rich	Low_complexity	1	40	(0)	680519
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
226	30.3	2.9	0.0	chr11	73143158	73143256	(61943366)	C	MIR3	SINE/MIR	(26)	182	81	681264
25	14.8	3.7	1.8	chr11	73377243	73377296	(61709326)	+	(GT)n	Simple_repeat	1	56	(0)	681727
6442	6.8	0.1	0.1	chr11	74115515	74116774	(60969848)	+	L1PB1	LINE/L1	4531	5791	(360)	683456
195	27.2	0.0	0.0	chr11	74116781	74117239	(60969383)	+	(TA)n	Simple_repeat	1	459	(0)	683457
919	10.9	0.0	0.0	chr11	77053445	77053572	(58033050)	+	MER41B	LTR/ERV1	1	128	(506)	689174
2920	11.8	1.6	0.7	chr11	77053578	77054012	(58032610)	C	MER83	LTR/ERV1	(9)	439	1	689175
364	23.1	12.5	1.2	chr11	78063004	78063121	(57023501)	+	MIR	SINE/MIR	26	152	(116)	691269
5084	16.7	4.6	9.0	chr11	78288408	78288986	(56797636)	+	L1MD	LINE/L1	4242	4801	(1345)	691740
236	13.9	0.0	0.0	chr11	78288987	78289022	(56797600)	+	U2	snRNA	1	36	(152)	691744
2662	21.8	9.0	2.1	chr11	78348307	78349192	(56737430)	+	L1ME1	LINE/L1	5208	6170	(9)	691850
1319	26.8	8.1	3.7	chr11	86180750	86181122	(48905500)	C	L2a	LINE/L2	(1)	3425	3039	705094
1625	20.9	8.8	2.3	chr11	86181123	86181558	(48905064)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	705095
359	16.2	9.2	4.8	chr11	86937190	86937293	(48149329)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	59	706349
4277	5.8	3.2	0.0	chr11	86937365	86937900	(48148722)	+	MER41A	LTR/ERV1	1	554	(0)	706350
250	30.1	8.9	6.6	chr11	95541375	95541495	(39545127)	+	LTR84a	LTR/ERVL	3	126	(631)	718791
544	24.7	6.0	3.5	chr11	95541497	95541774	(39544848)	+	LTR81B	LTR/Gypsy	1	300	(1093)	718792
195	29.4	1.4	1.4	chr11	95541838	95541906	(39544716)	+	L3	LINE/CR1	1868	1936	(2163)	718793
523	26.2	8.5	4.4	chr11	96330291	96330470	(38756152)	C	MIRb	SINE/MIR	(12)	256	69	719992
924	26.6	13.0	3.2	chr11	96330521	96330989	(38755633)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	3	719993
1448	22.4	11.1	6.1	chr11	97963447	97964133	(37122489)	C	MER61E	LTR/ERV1	(2)	777	1	721865
1432	23.5	7.1	7.4	chr11	97973243	97973850	(37112772)	C	MER61E	LTR/ERV1	(29)	616	7	721869
203	27.5	12.3	7.0	chr11	117143595	117143809	(17942813)	+	L2c	LINE/L2	3109	3336	(51)	750608
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
666	17.7	0.0	0.9	chr12	6899862	6899974	(126375335)	+	AluJo	SINE/Alu	129	240	(72)	789608
1831	21.2	7.3	1.2	chr12	6899979	6900402	(126374907)	+	MER66A	LTR/ERV1	27	478	(0)	789609
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
773	29.6	8.9	7.3	chr12	7057937	7058316	(126216993)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	151	789879
5345	11.6	5.2	0.3	chr12	7058317	7059095	(126216214)	+	LTR8B	LTR/ERV1	1	820	(0)	789880
316	28.7	3.6	0.9	chr12	9032201	9032309	(124243000)	+	LTR78B	LTR/ERV1	25	136	(1160)	793328
3252	19.0	11.3	1.5	chr12	9032364	9033101	(124242208)	+	LTR8B	LTR/ERV1	1	820	(0)	793329
2549	13.1	3.5	0.5	chr12	25691058	25691472	(107583837)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	816831
380	35.9	3.5	4.9	chr12	25691473	25691517	(107583792)	+	MIR	SINE/MIR	211	250	(12)	816830
236	24.3	4.1	4.1	chr12	25691643	25691715	(107583594)	+	L2a	LINE/L2	3354	3426	(0)	816832
13	22.4	0.0	4.4	chr12	31324752	31324796	(101950513)	+	(CCGGACC)n	Simple_repeat	1	45	(0)	825004
183	28.2	4.9	8.2	chr12	31618117	31618201	(101657108)	+	MIR	SINE/MIR	169	250	(12)	825637
1905	18.6	6.1	9.8	chr12	31618246	31618390	(101656919)	+	LTR54	LTR/ERV1	1	147	(363)	825642
3758	13.3	2.7	0.0	chr12	31618391	31618969	(101656340)	C	MER41E	LTR/ERV1	(0)	595	1	825643
4527	8.9	6.1	2.7	chr12	31733786	31734288	(101541021)	C	LTR8	LTR/ERV1	(166)	525	1	825921
872	32.1	7.2	4.1	chr12	31734289	31734503	(101540806)	C	LTR33	LTR/ERVL	(260)	255	33	825920
3942	11.7	3.2	2.0	chr12	31832619	31833230	(101442079)	C	LTR77	LTR/ERV1	(2)	620	1	826161
4308	12.8	0.3	0.5	chr12	32021013	32021530	(101253779)	C	MER41B	LTR/ERV1	(117)	517	2	826606
2657	17.6	4.7	11.4	chr12	32021531	32021598	(101253711)	C	MER67C	LTR/ERV1	(328)	383	363	826605
1879	17.2	0.7	1.6	chr12	32021599	32021911	(101253398)	C	AluJr	SINE/Alu	(2)	310	1	826608
1598	19.3	2.0	2.0	chr12	32946238	32946532	(100328777)	+	AluJb	SINE/Alu	5	299	(13)	828411
4108	9.0	6.9	2.6	chr12	32946664	32947269	(100328040)	+	MER41B	LTR/ERV1	1	634	(0)	828412
897	37.4	0.1	0.4	chr12	39711536	39714406	(93560903)	+	(TA)n	Simple_repeat	2	2868	(0)	832795
313	25.8	3.8	9.2	chr12	46357773	46357913	(86917396)	+	MER5A	DNA/hAT-Charlie	35	167	(22)	842149
834	17.2	16.3	0.0	chr12	49127221	49127389	(84147920)	C	AluJb	SINE/Alu	(45)	267	66	846443
1685	14.7	3.0	1.9	chr12	49273409	49273674	(84001635)	C	AluJr	SINE/Alu	(35)	277	9	846843
243	17.5	8.1	0.0	chr12	49273764	49273820	(84001489)	C	MER5A1	DNA/hAT-Charlie	(0)	166	105	846844
1141	15.4	13.0	2.6	chr12	49273843	49274076	(84001233)	+	AluJb	SINE/Alu	34	295	(17)	846845
14	17.1	0.0	2.9	chr12	50026038	50026077	(83249232)	+	A-rich	Low_complexity	1	38	(0)	848259
319	18.2	1.5	5.7	chr12	50026122	50026191	(83249118)	C	Charlie9	DNA/hAT-Charlie	(0)	2757	2691	848260
394	26.9	7.1	2.3	chr12	50400319	50400451	(82874858)	+	MIR	SINE/MIR	123	262	(0)	849134
186	37.0	2.9	1.3	chr12	53147082	53147951	(80127358)	+	(ATATAC)n	Simple_repeat	1	895	(0)	854151
38	0.0	0.0	0.0	chr12	53147958	53147990	(80127319)	+	(TG)n	Simple_repeat	1	33	(0)	854152
892	12.0	0.0	0.8	chr12	53147998	53148122	(80127187)	C	AluJb	SINE/Alu	(187)	125	2	854153
237	35.8	10.8	0.0	chr12	53441353	53441500	(79833809)	+	L2c	LINE/L2	3184	3349	(38)	854770
12	24.1	2.6	0.0	chr12	53441508	53441546	(79833763)	+	(GCCCC)n	Simple_repeat	1	40	(0)	854771
355	35.2	9.3	0.8	chr12	53727786	53728020	(79547289)	C	MIRc	SINE/MIR	(8)	260	4	855348
1829	19.9	4.2	9.1	chr12	56932050	56932574	(76342735)	+	MLT1D	LTR/ERVL-MaLR	2	499	(6)	860491
620	22.4	19.7	0.0	chr12	62258030	62258208	(71017101)	+	MIR	SINE/MIR	27	249	(13)	867684
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
893	16.4	1.9	0.6	chr12	68351935	68352093	(64923216)	+	MLT1A0	LTR/ERVL-MaLR	1	161	(204)	877220
670	14.3	1.9	0.9	chr12	68352094	68352199	(64923110)	+	MER41-int	LTR/ERV1	5840	5946	(0)	877221
3886	10.1	2.7	1.1	chr12	68352200	68352738	(64922571)	+	MER41B	LTR/ERV1	1	548	(86)	877221
13	12.8	2.6	5.1	chr12	70242939	70242976	(63032333)	+	(GGAGTGA)n	Simple_repeat	1	39	(0)	880614
27	6.1	0.0	0.0	chr12	70242991	70243025	(63032284)	+	(AACACA)n	Simple_repeat	1	35	(0)	880615
14	23.2	3.9	1.9	chr12	70243682	70243733	(63031576)	+	(GGT)n	Simple_repeat	1	54	(0)	880617
483	36.8	8.0	4.8	chr12	83173651	83174288	(50101021)	C	L2b	LINE/L2	(0)	3375	2716	898770
9931	8.2	1.3	13.2	chr12	91633761	91635553	(41639756)	+	LTR12C	LTR/ERV1	2	1579	(0)	910212
4510	12.2	0.2	0.2	chr12	96083136	96083769	(37191540)	+	MER41B	LTR/ERV1	1	634	(0)	918401
274	38.3	14.6	0.4	chr12	101730067	101730341	(31544968)	C	L2	LINE/L2	(559)	2860	2540	927835
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
23	28.5	1.3	0.0	chr12	106774607	106774682	(26500627)	+	GA-rich	Low_complexity	1	77	(0)	936818
496	21.7	6.5	4.3	chr12	108628808	108628975	(24646334)	+	MIR	SINE/MIR	18	193	(69)	940704
277	32.5	13.7	0.0	chr12	110050157	110050276	(23225033)	C	MIRc	SINE/MIR	(128)	140	2	943871
4489	6.3	0.2	0.2	chr12	110050344	110050896	(23224413)	+	MER41A	LTR/ERV1	1	553	(1)	943872
11	24.4	4.0	1.9	chr12	110502042	110502091	(22773218)	+	(CCGTCA)n	Simple_repeat	1	52	(0)	944882
4212	6.0	4.2	0.0	chr12	116556050	116556580	(16718729)	C	MER41A	LTR/ERV1	(0)	554	1	958367
340	34.4	4.0	6.0	chr12	116558867	116559197	(16716112)	C	Helitron2Na_Mam	RC?/Helitron?	(0)	324	1	958373
1490	10.7	2.6	6.7	chr12	119229581	119229820	(14045489)	+	MER30	DNA/hAT-Charlie	1	230	(0)	964296
865	26.0	10.6	2.9	chr12	119229821	119229872	(14045437)	C	L2a	LINE/L2	(651)	2768	2704	964291
644	31.4	7.8	5.1	chr12	119229966	119230338	(14044971)	+	MLT1J2	LTR/ERVL-MaLR	65	448	(0)	964297
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1984	12.5	0.4	1.8	chr12	122197185	122197464	(11077845)	C	AluSq2	SINE/Alu	(37)	276	1	971300
2843	11.5	7.4	0.2	chr12	122197465	122197617	(11077692)	C	LTR71A	LTR/ERV1	(275)	184	2	971299
2100	14.5	0.0	0.0	chr12	122366559	122366848	(10908461)	+	AluSz6	SINE/Alu	1	290	(22)	971633
772	22.0	4.1	0.1	chr12	123033999	123034206	(10241103)	+	MLT1A	LTR/ERVL-MaLR	155	390	(0)	973181
2252	7.3	1.0	0.0	chr12	123458593	123458893	(9816416)	C	AluSc8	SINE/Alu	(7)	304	1	974153
1840	16.3	1.0	1.9	chr12	124919004	124919333	(8355976)	+	AluJb	SINE/Alu	2	312	(0)	977147
3575	16.1	1.1	13.5	chr12	124919340	124920129	(8355180)	+	LTR8	LTR/ERV1	1	691	(0)	977148
4014	10.0	0.5	0.0	chr12	126903073	126903623	(6371686)	C	MER41A	LTR/ERV1	(0)	554	1	980589
3989	13.4	2.0	0.2	chr12	126907913	126908534	(6366775)	C	MER41B	LTR/ERV1	(0)	634	1	980595
2163	17.3	5.8	2.9	chr12	126952959	126953446	(6321863)	C	LTR8A	LTR/ERV1	(191)	536	34	980668
3741	12.0	9.1	0.0	chr12	126953460	126954032	(6321277)	+	MER41B	LTR/ERV1	1	630	(4)	980670
12	9.3	0.0	4.0	chr12	130957893	130957917	(2317392)	+	(CTC)n	Simple_repeat	1	25	(0)	987545
18	6.7	2.9	2.9	chr12	130957942	130957975	(2317334)	+	(TTCC)n	Simple_repeat	1	35	(0)	987546
4197	13.9	2.4	1.9	chr12	131362184	131362814	(1912495)	C	MER41B	LTR/ERV1	(0)	634	1	988030
2023	29.7	4.3	5.0	chr12	131362815	131362842	(1912467)	+	L1MC5a	LINE/L1	2448	2472	(305)	988027
2089	15.9	3.3	0.3	chr12	131362843	131363196	(1912113)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	988031
2882	14.4	13.7	1.3	chr12	131605084	131605637	(1669672)	C	MER41B	LTR/ERV1	(0)	634	1	988331
2822	18.4	11.2	3.6	chr12	131606124	131606760	(1668549)	C	LTR8	LTR/ERV1	(0)	691	1	988332
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
1287	17.6	2.1	3.9	chr13	46296409	46296869	(68067459)	C	MLT1D	LTR/ERVL-MaLR	(8)	497	1	1033638
418	27.8	14.2	1.1	chr13	49690617	49690805	(64673523)	+	MIRb	SINE/MIR	27	244	(24)	1038858
2078	22.8	5.6	7.6	chr13	64274384	64275072	(50089256)	+	MER61E	LTR/ERV1	1	776	(3)	1058319
3072	17.1	2.1	1.9	chr13	80514278	80514843	(33849485)	+	Tigger1	DNA/TcMar-Tigger	761	1327	(1091)	1080429
18203	10.4	2.6	0.8	chr13	80577347	80582407	(33781921)	+	L1PB1	LINE/L1	345	5511	(1351)	1080491
534	29.6	21.9	1.5	chr13	80610428	80610770	(33753558)	+	MLT1J1-int	LTR/ERVL-MaLR	310	723	(664)	1080530
563	29.2	6.5	4.2	chr13	80610862	80611100	(33753228)	+	MLT1J1-int	LTR/ERVL-MaLR	1033	1277	(110)	1080530
3954	16.3	0.6	3.6	chr13	80624276	80625026	(33739302)	C	L1MB1	LINE/L1	(2)	6166	5439	1080554
5542	13.2	3.2	0.7	chr13	80639297	80640836	(33723492)	+	L1PA16	LINE/L1	4360	5936	(230)	1080576
16456	19.4	2.3	2.1	chr13	80659618	80664289	(33700039)	C	L1PB3	LINE/L1	(365)	6505	1737	1080593
6312	11.6	1.4	1.6	chr13	80676066	80676787	(33687541)	C	L1MA1	LINE/L1	(2936)	4629	3916	1080604
14890	13.5	2.9	2.9	chr13	80679234	80680494	(33683834)	C	L1MA1	LINE/L1	(5136)	2429	1127	1080604
374	33.1	13.1	3.1	chr13	80748775	80749061	(33615267)	+	L2a	LINE/L2	2693	3012	(407)	1080678
1306	24.7	2.5	3.2	chr13	80798335	80798735	(33565593)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	108	1080753
5721	17.3	4.1	2.1	chr13	80848979	80850554	(33513774)	C	L1MA8	LINE/L1	(460)	5831	4225	1080805
3039	10.0	3.1	0.2	chr13	89794741	89795213	(24569115)	C	L1PA8	LINE/L1	(764)	5382	4896	1092101
4393	6.9	0.0	0.3	chr13	89795187	89795756	(24568572)	+	L1PA8	LINE/L1	5392	5959	(213)	1092101
5126	12.6	3.6	2.5	chr13	89798720	89800150	(24564178)	C	L1PA16	LINE/L1	(1)	6165	4725	1092104
15	13.9	0.0	0.0	chr13	89851525	89851551	(24512777)	+	(A)n	Simple_repeat	1	27	(0)	1092178
2146	17.4	4.9	0.7	chr13	89852423	89852832	(24511496)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1092180
15	25.5	0.0	0.0	chr13	89852907	89852943	(24511385)	+	(AC)n	Simple_repeat	1	37	(0)	1092181
3150	14.8	6.1	0.8	chr13	89890625	89891231	(24473097)	+	L1MA5	LINE/L1	5643	6283	(17)	1092238
943	28.9	5.4	4.6	chr13	89925710	89926075	(24438253)	+	L2	LINE/L2	2427	2795	(624)	1092272
1290	22.8	5.2	1.4	chr13	89986123	89986473	(24377855)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1092363
2378	17.9	9.2	8.7	chr13	90002782	90003426	(24360902)	C	LTR8A	LTR/ERV1	(64)	663	1	1092382
5079	20.9	1.8	1.6	chr13	90030552	90032275	(24332053)	+	L1MB1	LINE/L1	4275	6023	(145)	1092421
449	31.2	6.5	1.6	chr13	90050885	90051073	(24313255)	C	MLT1K	LTR/ERVL-MaLR	(74)	521	323	1092442
337	37.4	6.5	1.2	chr13	90110222	90110470	(24253858)	+	L3	LINE/CR1	872	1134	(2965)	1092518
607	20.0	0.0	10.9	chr13	90146951	90147124	(24217204)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2564	1092563
923	20.8	0.5	3.7	chr13	90147126	90147340	(24216988)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(860)	208	1	1092564
654	30.0	6.9	2.9	chr13	90169021	90169367	(24194961)	+	L1MC5a	LINE/L1	1964	2325	(452)	1092595
1860	18.1	11.2	0.8	chr13	90169371	90170039	(24194289)	+	L1M3	LINE/L1	4991	5735	(556)	1092596
703	14.6	17.6	2.3	chr13	90299741	90299936	(24064392)	C	L1MA8	LINE/L1	(5)	6307	6069	1092751
30	18.5	1.4	1.4	chr13	90300146	90300259	(24064069)	+	(TTA)n	Simple_repeat	1	114	(0)	1092752
14030	19.3	3.2	2.8	chr13	90357024	90358314	(24006014)	+	L1MC1	LINE/L1	3270	4586	(1735)	1092818
4290	20.4	3.8	4.4	chr13	90506295	90507322	(23857006)	+	L1MC1	LINE/L1	5270	6299	(34)	1093021
3555	18.2	3.6	1.6	chr13	90518538	90519263	(23845065)	+	L1MC1	LINE/L1	5460	6200	(133)	1093035
371	37.9	8.2	7.8	chr13	90574880	90575485	(23788843)	C	MamGyp-int	LTR/Gypsy	(1033)	4070	3462	1093088
438	30.4	1.6	0.2	chr13	90711248	90711410	(23652918)	+	L1M5	LINE/L1	5468	5632	(546)	1093273
303	30.9	6.7	5.1	chr13	90723207	90723383	(23640945)	C	HAL1ME	LINE/L1	(157)	2308	2129	1093288
304	33.1	5.0	1.3	chr13	90723367	90723519	(23640809)	C	HAL1ME	LINE/L1	(135)	2330	2172	1093289
316	27.5	3.2	0.0	chr13	90723560	90723679	(23640649)	C	HAL1ME	LINE/L1	(361)	2104	1981	1093289
207	30.7	9.0	3.8	chr13	90760207	90760311	(23604017)	C	L2a	LINE/L2	(0)	3426	3316	1093345
244	33.3	3.9	1.0	chr13	90800429	90800528	(23563800)	+	LTR33C	LTR/ERVL	40	142	(487)	1093406
338	40.9	2.5	1.2	chr13	90834812	90834972	(23529356)	+	MamRTE1	LINE/RTE-BovB	3225	3387	(425)	1093443
230	26.9	0.0	0.0	chr13	90962758	90962809	(23401519)	C	Tigger16b	DNA/TcMar-Tigger	(211)	125	74	1093590
272	18.9	3.6	0.0	chr13	91032527	91032579	(23331749)	+	MER50	LTR/ERV1	1	55	(679)	1093679
435	20.2	15.0	0.0	chr13	91032578	91032696	(23331632)	+	MER58A	DNA/hAT-Charlie	28	167	(57)	1093680
910	19.0	7.7	1.6	chr13	91064886	91065067	(23299261)	C	MER101B	LTR/ERV1	(342)	228	35	1093722
349	30.2	5.7	3.2	chr13	91065163	91065316	(23299012)	+	L1M5	LINE/L1	2883	3040	(3106)	1093724
593	29.0	4.0	1.5	chr13	91122552	91122747	(23241581)	C	MER46C	DNA/TcMar-Tigger	(1)	337	137	1093810
1506	26.4	3.0	0.5	chr13	91122762	91123180	(23241148)	C	MER57F	LTR/ERV1	(5)	430	1	1093811
693	34.3	11.6	3.6	chr13	91123507	91124371	(23239957)	+	L2a	LINE/L2	2458	3409	(17)	1093812
271	31.2	3.9	3.5	chr13	91125025	91125179	(23239149)	C	LTR81A	LTR/Gypsy	(1059)	334	178	1093816
180	21.9	0.0	0.0	chr13	91152165	91152205	(23212123)	+	L2b	LINE/L2	3335	3375	(0)	1093858
14	19.9	0.0	4.5	chr13	91162114	91162157	(23202171)	+	G-rich	Low_complexity	1	44	(0)	1093866
754	33.1	6.5	4.2	chr13	91170552	91170952	(23193376)	C	MamRep1527	LTR	(220)	749	338	1093875
359	33.6	4.8	4.8	chr13	91189137	91189367	(23174961)	+	L2c	LINE/L2	3024	3254	(133)	1093905
22	16.2	3.4	3.3	chr13	91189472	91189530	(23174798)	+	A-rich	Low_complexity	1	61	(0)	1093906
16	16.5	0.0	0.0	chr13	91189639	91189665	(23174663)	+	(T)n	Simple_repeat	1	27	(0)	1093907
1225	20.8	0.5	0.0	chr13	91237102	91237313	(23127015)	+	MER58A	DNA/hAT-Charlie	6	218	(6)	1093969
5896	18.6	5.8	2.4	chr13	91261818	91263512	(23100816)	C	L1ME1	LINE/L1	(306)	6642	4878	1094012
2243	12.5	3.3	2.8	chr13	91298689	91299050	(23065278)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1094070
1649	29.9	6.7	7.7	chr13	91299051	91299902	(23064426)	C	L1MC4	LINE/L1	(292)	7750	6930	1094069
1938	14.9	6.3	2.3	chr13	91322640	91322988	(23041340)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1094110
207	31.9	4.9	3.6	chr13	91417199	91417338	(22946990)	C	L2	LINE/L2	(965)	2454	2313	1094222
692	31.7	17.3	2.5	chr13	91439391	91439998	(22924330)	+	L2b	LINE/L2	2255	2975	(444)	1094250
2231	26.9	6.6	5.0	chr13	91440012	91441214	(22923114)	C	L1MEb	LINE/L1	(4900)	1300	75	1094252
622	18.6	4.9	12.4	chr13	91484958	91485135	(22879193)	+	MER5A1	DNA/hAT-Charlie	3	166	(0)	1094312
2485	29.4	17.1	11.9	chr13	91492091	91492236	(22872092)	+	L2a	LINE/L2	673	810	(2609)	1094320
2309	19.2	3.7	3.9	chr13	91492237	91492756	(22871572)	C	MLT2B1	LTR/ERVL	(0)	520	2	1094321
2587	9.1	1.4	0.0	chr13	91517677	91518026	(22846302)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1094361
860	22.0	0.6	2.7	chr13	91518209	91518394	(22845934)	+	AluJo	SINE/Alu	130	311	(1)	1094362
3496	7.8	1.8	0.8	chr13	91522532	91523023	(22841305)	C	L1PA6	LINE/L1	(13)	6141	5645	1094369
4028	15.9	6.2	1.6	chr13	91523058	91523843	(22840485)	+	L1MA9	LINE/L1	5459	6282	(30)	1094370
12012	13.8	3.3	0.9	chr13	91547273	91548988	(22815340)	+	L1MC1	LINE/L1	3251	5026	(1120)	1094402
244	27.9	10.1	9.9	chr13	91574211	91574353	(22789975)	+	MIR3	SINE/MIR	32	176	(54)	1094443
349	38.8	8.4	3.0	chr13	91617082	91617524	(22746804)	C	L2c	LINE/L2	(0)	3387	2919	1094494
503	28.4	8.4	7.1	chr13	91623842	91624193	(22740135)	+	L1MEj	LINE/L1	1713	2069	(91)	1094506
195	25.8	7.5	4.6	chr13	91645037	91645101	(22719227)	+	MIR1_Amn	SINE/MIR	33	99	(131)	1094540
399	33.8	4.2	7.1	chr13	91748525	91748989	(22615339)	C	L2c	LINE/L2	(8)	3379	2929	1094688
212	37.1	6.1	5.3	chr13	91812492	91812622	(22551706)	C	MIR1_Amn	SINE/MIR	(80)	150	19	1094785
473	20.9	2.6	2.6	chr13	92436388	92436500	(21927828)	+	LTR40a	LTR/ERVL	407	519	(0)	1095565
504	29.6	6.6	3.3	chr13	92511153	92511428	(21852900)	C	L1M6	LINE/L1	(5072)	1424	1139	1095669
534	22.8	8.5	3.2	chr13	92522790	92522979	(21841349)	+	Charlie7	DNA/hAT-Charlie	1091	1291	(1321)	1095680
937	29.8	7.2	4.1	chr13	92523067	92523727	(21840601)	+	Charlie7	DNA/hAT-Charlie	1425	2107	(505)	1095681
13	10.0	0.0	0.0	chr13	92642740	92642761	(21721567)	+	(TGT)n	Simple_repeat	1	22	(0)	1095851
261	30.4	4.0	10.6	chr13	92642794	92643010	(21721318)	+	LTR85a	LTR/Gypsy?	200	401	(301)	1095852
2512	2.0	0.0	0.0	chr13	92643011	92643315	(21721013)	C	L1P1	LINE/L1	(779)	5367	5063	1095853
4246	11.9	3.3	0.1	chr13	108682320	108682999	(5681329)	C	LTR62	LTR/ERVL	(5)	704	3	1119121
262	37.7	4.5	3.2	chr13	108683013	108683297	(5681031)	+	L2c	LINE/L2	3052	3340	(47)	1119117
11208	10.4	4.8	1.5	chr13	110962667	110963654	(3400674)	+	MER41-int	LTR/ERV1	4951	5944	(2)	1121988
3830	12.7	0.2	1.4	chr13	110963655	110964213	(3400115)	+	MER41A	LTR/ERV1	1	552	(2)	1121988
538	18.3	0.0	0.0	chr14	23286858	23286939	(83756779)	+	FLAM_A	SINE/Alu	41	122	(20)	1132627
2655	13.9	3.2	7.7	chr14	23287055	23287232	(83756486)	+	LTR64	LTR/ERV1	1	189	(339)	1132628
4278	8.3	0.0	0.7	chr14	31242186	31242743	(75800975)	C	MER41A	LTR/ERV1	(0)	554	1	1143240
4121	13.4	4.6	3.2	chr14	31242744	31242857	(75800861)	C	MER72	LTR/ERV1	(605)	117	1	1143239
20	8.2	0.0	8.7	chr14	35809111	35809156	(71234562)	+	(GCC)n	Simple_repeat	1	46	(0)	1150654
628	23.4	2.4	5.8	chr14	37167293	37167365	(69876353)	C	MER5A1	DNA/hAT-Charlie	(0)	166	93	1152586
4559	11.1	3.9	5.1	chr14	37167366	37168065	(69875653)	+	LTR8	LTR/ERV1	1	691	(0)	1152587
13	31.1	1.2	4.8	chr14	57390736	57390817	(49652901)	+	G-rich	Low_complexity	1	83	(0)	1180687
35	21.3	5.3	3.6	chr14	60249116	60249248	(46794470)	+	(GCG)n	Simple_repeat	1	140	(0)	1184789
2101	10.3	7.0	0.0	chr14	64362980	64363270	(42680448)	+	AluSp	SINE/Alu	1	313	(0)	1191134
4404	11.3	1.9	0.2	chr14	64363425	64364047	(42679671)	+	MER41B	LTR/ERV1	1	634	(0)	1191135
303	14.6	0.0	0.0	chr14	72907419	72907465	(34136253)	C	FLAM_C	SINE/Alu	(185)	117	71	1205057
3767	6.1	2.1	0.0	chr14	72907466	72907924	(34135794)	+	MER41A	LTR/ERV1	1	469	(85)	1205058
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
318	25.3	13.2	0.6	chr14	91267849	91268007	(15775711)	C	L2c	LINE/L2	(936)	2483	2302	1235428
2102	10.0	0.7	0.0	chr14	91268100	91268400	(15775318)	+	LTR62	LTR/ERVL	2	304	(405)	1235437
2595	8.9	0.0	3.0	chr14	102533654	102534023	(4509695)	C	MER41A	LTR/ERV1	(169)	385	21	1255114
685	17.0	4.3	0.0	chr14	102534024	102534135	(4509583)	+	AluJo	SINE/Alu	13	129	(183)	1255116
2411	6.5	2.0	0.0	chr14	102534144	102534437	(4509281)	+	AluY	SINE/Alu	2	301	(10)	1255117
934	13.7	0.8	0.0	chr14	102550746	102550876	(4492842)	+	FLAM_C	SINE/Alu	1	132	(11)	1255152
3946	8.6	3.2	1.1	chr14	102551038	102551410	(4492308)	+	MER41A	LTR/ERV1	1	379	(175)	1255153
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
2375	9.9	0.0	0.0	chr15	41283359	41283660	(60707529)	+	AluSx	SINE/Alu	3	304	(8)	1292973
1318	15.4	1.7	0.9	chr15	44727256	44727484	(57263705)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	6	1299467
4768	8.9	0.6	0.0	chr15	45583636	45584264	(56406925)	C	MER41B	LTR/ERV1	(1)	633	1	1300981
1597	12.1	4.3	2.6	chr15	45584265	45584411	(56406778)	C	MER4D1	LTR/ERV1	(123)	777	624	1300980
697	19.6	0.0	2.1	chr15	45584389	45584546	(56406643)	+	FLAM_C	SINE/Alu	6	218	(84)	1300977
20	16.2	1.9	3.8	chr15	49169870	49169876	(52821313)	+	(AACA)n	Simple_repeat	1	49	(0)	1305903
12	23.9	0.0	2.4	chr15	49169877	49169917	(52821272)	+	A-rich	Low_complexity	1	41	(0)	1305904
15	6.7	2.9	5.6	chr15	50686809	50686843	(51304346)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1308295
1042	31.6	17.3	3.4	chr15	52013061	52013449	(49977740)	C	L3	LINE/CR1	(941)	3158	2678	1310519
1071	16.7	0.0	0.0	chr15	56735480	56735641	(45255548)	+	AluJo	SINE/Alu	136	297	(15)	1317509
887	13.8	9.7	4.9	chr15	56735646	56735850	(45255339)	C	LTR54	LTR/ERV1	(277)	233	18	1317508
2333	9.8	1.2	0.0	chr15	56735851	56736185	(45255004)	+	L1PB1	LINE/L1	5811	6149	(2)	1317510
4264	13.7	0.2	0.2	chr15	56783337	56783970	(45207219)	+	MER41B	LTR/ERV1	1	634	(0)	1317606
3838	12.3	6.5	0.3	chr15	56784224	56784817	(45206372)	+	MER41B	LTR/ERV1	1	633	(1)	1317607
227	30.0	4.8	2.9	chr15	57950719	57950821	(44040368)	+	L2c	LINE/L2	3282	3386	(1)	1319435
3474	13.1	4.0	1.1	chr15	58352020	58352550	(43638639)	C	MER41B	LTR/ERV1	(87)	547	1	1320027
1668	8.0	1.4	0.0	chr15	58352551	58352763	(43638426)	C	MER41-int	LTR/ERV1	(2)	5944	5729	1320027
28	13.3	0.0	6.2	chr15	58987700	58987764	(43003425)	+	(GGC)n	Simple_repeat	1	65	(0)	1321239
4235	16.2	2.6	2.7	chr15	63792673	63793125	(38198064)	C	MER21B	LTR/ERVL	(52)	816	362	1329140
4655	9.8	0.2	0.2	chr15	63793126	63793756	(38197433)	+	MER41B	LTR/ERV1	1	631	(3)	1329141
347	24.2	2.9	0.0	chr15	65185929	65186027	(36805162)	+	LTR33	LTR/ERVL	312	413	(102)	1332079
1042	10.2	0.0	0.0	chr15	65186034	65186170	(36805019)	C	FLAM_C	SINE/Alu	(6)	137	1	1332080
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
4640	12.0	0.0	0.3	chr15	66624022	66624655	(35366534)	+	MER41B	LTR/ERV1	3	634	(0)	1335108
189	27.6	4.9	0.0	chr15	67836069	67836126	(34155063)	+	MIRb	SINE/MIR	114	174	(94)	1337197
3864	12.5	2.8	5.5	chr15	67900450	67900894	(34090295)	C	MER41B	LTR/ERV1	(204)	430	1	1337340
1304	23.1	7.4	5.0	chr15	67900895	67901183	(34090006)	C	L1MEg	LINE/L1	(939)	5207	4906	1337335
3339	14.8	3.6	4.7	chr15	68023151	68023917	(33967272)	C	LTR8B	LTR/ERV1	(6)	814	20	1337600
499	26.9	15.5	1.1	chr15	68023932	68024119	(33967070)	C	LTR16	LTR/ERVL	(218)	220	1	1337598
413	22.8	25.6	0.0	chr15	82540917	82541131	(19450058)	+	L2a	LINE/L2	3105	3393	(33)	1363031
193	24.8	11.4	6.4	chr15	89782104	89782228	(12208961)	+	MIR3	SINE/MIR	7	138	(70)	1374871
4195	11.7	4.3	1.0	chr15	89782290	89782735	(12208454)	+	MER41B	LTR/ERV1	2	449	(185)	1374872
3280	13.7	2.6	0.6	chr15	90648416	90648950	(11342239)	+	MER41B	LTR/ERV1	2	547	(87)	1376776
273	31.2	4.0	5.3	chr15	90650713	90650784	(11340405)	+	L2b	LINE/L2	3007	3082	(293)	1376781
1730	17.4	12.9	2.2	chr15	90650785	90651185	(11340004)	+	LTR47A	LTR/ERVL	3	452	(0)	1376782
3228	23.0	11.6	3.1	chr15	101124032	101124565	(866624)	+	L1MB7	LINE/L1	4817	5437	(747)	1392359
12	21.6	0.0	0.0	chr16	78382	78413	(90259932)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1394142
2482	6.3	0.0	0.0	chr16	401146	401447	(89936898)	C	AluSg	SINE/Alu	(8)	302	1	1394693
13	13.6	0.0	7.9	chr16	1152609	1152646	(89185699)	+	(CCCGC)n	Simple_repeat	1	38	(0)	1395552
29	22.0	0.0	2.6	chr16	1152655	1152732	(89185613)	+	G-rich	Low_complexity	1	78	(0)	1395553
4241	8.2	0.7	2.0	chr16	1293859	1294279	(89044066)	C	MER41A	LTR/ERV1	(130)	424	1	1395699
684	17.3	0.8	6.8	chr16	1294280	1294311	(89044034)	+	AluJr	SINE/Alu	202	229	(83)	1395698
189	22.0	0.0	3.9	chr16	4271706	4271757	(86066588)	+	AmnSINE1	SINE/5S-Deu-L2	76	125	(450)	1400801
1958	13.8	25.5	0.2	chr16	8108788	8109218	(82229127)	C	MER51A	LTR/ERV1	(0)	634	2	1408336
3626	14.9	3.3	4.5	chr16	8109316	8109935	(82228410)	C	LTR9	LTR/ERV1	(0)	612	1	1408337
2396	8.1	0.0	0.3	chr16	8112559	8112855	(82225490)	+	AluY	SINE/Alu	1	296	(15)	1408346
4001	13.8	0.3	9.2	chr16	8112856	8113553	(82224792)	+	LTR8	LTR/ERV1	45	691	(0)	1408345
1053	24.7	11.9	5.0	chr16	9072452	9072812	(81265533)	C	MER39	LTR/ERV1	(171)	536	1	1410519
13	33.0	1.7	0.0	chr16	10944605	10944664	(79393681)	+	(CCG)n	Simple_repeat	1	61	(0)	1414616
2284	11.5	0.3	0.0	chr16	11628672	11628975	(78709370)	C	AluSz	SINE/Alu	(7)	305	1	1416149
1997	15.1	0.3	1.0	chr16	11628976	11629106	(78709239)	C	AluJr	SINE/Alu	(180)	132	3	1416148
3364	11.6	4.9	1.1	chr16	12611148	12611680	(77726665)	+	MER41A	LTR/ERV1	1	554	(0)	1418242
4662	9.3	1.9	0.3	chr16	15570564	15571187	(74767158)	C	MER41B	LTR/ERV1	(0)	634	1	1424735
467	18.9	0.0	16.9	chr16	15571188	15571236	(74767109)	C	MER20	DNA/hAT-Charlie	(143)	76	36	1424734
1205	23.6	2.4	13.2	chr16	15571270	15571359	(74766986)	+	MER4C	LTR/ERV1	1	83	(382)	1424736
1420	11.6	3.6	0.0	chr16	15574371	15574586	(74763759)	C	LTR8	LTR/ERV1	(467)	224	1	1424743
3734	13.7	0.5	2.4	chr16	15574592	15574795	(74763550)	C	LTR39	LTR/ERV1	(166)	617	423	1424742
250	30.5	2.1	0.0	chr16	15576454	15576548	(74761797)	C	MLT1O	LTR/ERVL-MaLR	(18)	524	428	1424750
568	20.6	5.5	12.4	chr16	15576553	15576746	(74761599)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	285	1424751
3137	18.8	2.6	1.9	chr16	15576752	15577391	(74760954)	C	LTR9D	LTR/ERV1	(0)	645	1	1424752
4275	14.7	0.0	0.2	chr16	17591112	17591746	(72746599)	+	MER41B	LTR/ERV1	1	634	(0)	1429437
257	29.6	3.4	7.2	chr16	20787463	20787615	(69550730)	+	MER5A	DNA/hAT-Charlie	36	182	(7)	1436486
320	32.8	4.4	1.5	chr16	20787695	20787827	(69550518)	+	MIRc	SINE/MIR	14	150	(118)	1436487
336	24.3	2.6	0.0	chr16	20787829	20787902	(69550443)	+	MER81	DNA/hAT-Blackjack	1	76	(38)	1436488
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
330	21.3	13.9	11.0	chr16	23597463	23597585	(66740760)	+	HAL1b	LINE/L1	1844	1991	(430)	1442649
369	29.3	15.8	2.0	chr16	24538075	24538325	(65800020)	C	L2a	LINE/L2	(0)	3426	3135	1444968
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
14	8.2	3.9	0.0	chr16	46831050	46831075	(43507270)	+	(CCGC)n	Simple_repeat	1	27	(0)	1466114
3949	15.2	2.5	1.9	chr16	46943138	46943588	(43394757)	C	MER41B	LTR/ERV1	(185)	449	2	1466370
1906	15.8	0.0	4.6	chr16	46943589	46943757	(43394588)	+	AluJr	SINE/Alu	153	309	(3)	1466369
4607	10.1	1.7	0.3	chr16	50458067	50458689	(39879656)	+	MER41B	LTR/ERV1	3	634	(0)	1472528
1589	19.2	5.3	1.0	chr16	53430070	53430374	(36907971)	+	MER67B	LTR/ERV1	343	661	(0)	1477834
227	28.3	0.0	0.0	chr16	53430375	53430427	(36907918)	C	MLT1G1	LTR/ERVL-MaLR	(287)	292	240	1477833
3970	8.9	1.0	3.7	chr16	53430551	53431086	(36907259)	+	MER41C	LTR/ERV1	1	521	(0)	1477835
3900	11.0	2.3	1.4	chr16	65768863	65769426	(24568919)	C	MER61E	LTR/ERV1	(0)	569	1	1498482
13	26.6	0.0	0.0	chr16	67109951	67109987	(23228358)	+	(CCG)n	Simple_repeat	1	37	(0)	1501116
19	7.0	0.0	0.0	chr16	67109988	67110017	(23228328)	+	(AGGTG)n	Simple_repeat	1	30	(0)	1501117
20	26.9	0.0	2.9	chr16	67562427	67562496	(22775849)	+	(CCCCT)n	Simple_repeat	1	70	(0)	1501890
12	28.1	1.9	1.9	chr16	67562503	67562555	(22775790)	+	(GCGCCG)n	Simple_repeat	1	54	(0)	1501891
15	17.8	2.6	0.0	chr16	67562793	67562830	(22775515)	+	(CGGCGC)n	Simple_repeat	1	39	(0)	1501892
278	26.5	0.0	4.8	chr16	69396438	69396540	(20941805)	+	MIR3	SINE/MIR	110	207	(1)	1505711
16	17.3	8.1	3.0	chr16	70251620	70251681	(20086664)	+	(CCG)n	Simple_repeat	1	67	(0)	1507543
1995	24.0	4.4	7.3	chr16	77679893	77680474	(12657871)	C	L1MB7	LINE/L1	(3)	6181	5611	1520278
771	29.7	5.7	5.7	chr16	79841765	79842118	(10496227)	C	L1ME3F	LINE/L1	(178)	6065	5711	1524255
464	17.5	0.0	0.0	chr16	79842119	79842198	(10496147)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	1524256
771	29.7	5.7	5.7	chr16	79842199	79842282	(10496063)	C	L1ME3F	LINE/L1	(533)	5710	5628	1524255
451	21.8	1.9	0.0	chr16	79971546	79971646	(10366699)	+	MLT1F2	LTR/ERVL-MaLR	458	560	(0)	1524511
266	27.3	2.9	0.0	chr16	79971935	79972000	(10366345)	+	L2c	LINE/L2	3320	3387	(0)	1524512
554	20.4	6.2	2.1	chr16	79972523	79972662	(10365683)	+	MER5A	DNA/hAT-Charlie	34	179	(10)	1524513
251	35.9	9.7	2.6	chr16	80012505	80012733	(10325612)	C	MIRc	SINE/MIR	(11)	257	11	1524578
27	17.7	0.0	1.7	chr16	81779195	81779253	(8559092)	+	(GGCGG)n	Simple_repeat	1	59	(0)	1528023
205	31.0	2.7	1.4	chr16	85535934	85536005	(4802340)	C	L2a	LINE/L2	(15)	3411	3339	1535023
348	21.9	10.2	1.6	chr16	85550089	85550213	(4788132)	C	MIRb	SINE/MIR	(94)	174	38	1535046
839	26.3	8.1	0.9	chr16	85550224	85550453	(4787892)	+	MIR	SINE/MIR	15	262	(0)	1535047
14	17.6	2.0	5.9	chr16	85553206	85553255	(4785090)	+	G-rich	Low_complexity	1	51	(0)	1535051
20	12.2	2.0	5.9	chr16	85553269	85553318	(4785027)	+	(CCG)n	Simple_repeat	1	51	(0)	1535052
15	10.2	9.1	2.1	chr16	85799767	85799810	(4538535)	+	(GGCCG)n	Simple_repeat	1	48	(0)	1535469
227	26.0	4.1	5.3	chr16	87931482	87931585	(2406760)	+	MIRc	SINE/MIR	63	157	(51)	1539344
12	21.3	4.4	2.1	chr16	88706337	88706381	(1631964)	+	(GCCC)n	Simple_repeat	1	47	(0)	1540345
14	23.1	3.4	3.3	chr16	89093689	89093747	(1244598)	+	(CCACGG)n	Simple_repeat	1	61	(0)	1540793
1529	23.0	10.3	1.3	chr16	89333230	89333780	(1004565)	C	L1MC1	LINE/L1	(5)	6328	5707	1541095
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
4451	19.0	7.1	6.0	chr17	1137340	1137771	(82119670)	C	Tigger1	DNA/TcMar-Tigger	(1943)	475	1	1546415
2305	9.0	0.0	1.0	chr17	1137904	1138202	(82119239)	C	AluSx1	SINE/Alu	(15)	297	2	1546418
12	23.1	0.0	4.5	chr17	3893402	3893445	(79363996)	+	(GGCGA)n	Simple_repeat	1	44	(0)	1551951
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
14	8.2	3.9	0.0	chr17	4142924	4142949	(79114492)	+	(GCC)n	Simple_repeat	1	27	(0)	1552422
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
2166	6.8	0.7	1.1	chr17	4795661	4795938	(78461503)	C	AluSg	SINE/Alu	(0)	310	34	1553804
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
25	11.0	0.0	2.4	chr17	13476713	13476753	(69780688)	+	(GT)n	Simple_repeat	1	41	(0)	1569840
13	11.6	0.0	6.2	chr17	13476815	13476846	(69780595)	+	A-rich	Low_complexity	1	32	(0)	1569841
1979	1.4	0.0	0.0	chr17	19112420	19112636	(64144805)	C	U3	snRNA	(0)	217	1	1579881
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
4148	15.3	0.8	0.5	chr17	27575049	27575680	(55681761)	C	MER41B	LTR/ERV1	(0)	634	1	1587068
203	30.4	3.7	9.7	chr17	27575681	27575701	(55681740)	+	L2c	LINE/L2	3376	3393	(33)	1587067
352	30.5	1.5	5.2	chr17	27908001	27908082	(55349359)	C	MIRb	SINE/MIR	(10)	258	179	1587646
4498	9.4	2.7	2.8	chr17	27908083	27908524	(55348917)	+	MER41B	LTR/ERV1	1	452	(182)	1587647
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
386	28.2	9.2	7.3	chr17	33908254	33908498	(49348943)	+	MLT1O	LTR/ERVL-MaLR	147	396	(146)	1599543
3833	25.9	5.5	5.1	chr17	37239129	37239815	(46017626)	C	L1ME3D	LINE/L1	(1773)	4373	3702	1605423
2178	10.3	0.7	1.0	chr17	38854254	38854553	(44402888)	C	AluSx1	SINE/Alu	(13)	299	1	1608734
1203	20.4	6.2	7.6	chr17	39013856	39014074	(44243367)	C	MER33	DNA/hAT-Charlie	(91)	233	1	1609124
838	9.1	11.2	1.4	chr17	39014134	39014172	(44243269)	+	MER21A	LTR/ERVL	1	41	(890)	1609126
4351	12.1	1.4	4.1	chr17	39014173	39014879	(44242562)	+	LTR8	LTR/ERV1	1	688	(3)	1609127
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
857	19.9	8.6	0.0	chr17	41678325	41678495	(41578946)	+	LTR27D	LTR/ERV1	287	473	(142)	1614027
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
1967	11.0	3.6	0.0	chr17	41691803	41692094	(41565347)	C	AluSq	SINE/Alu	(9)	304	2	1614056
371	23.4	4.1	2.1	chr17	41692484	41692579	(41564862)	+	Tigger3a	DNA/TcMar-Tigger	1	98	(250)	1614057
19	26.6	4.0	3.8	chr17	42276228	42276328	(40981113)	+	(GCTC)n	Simple_repeat	1	105	(0)	1615285
2928	11.8	2.4	0.2	chr17	42535068	42535524	(40721917)	C	MER41B	LTR/ERV1	(167)	467	1	1615833
434	30.2	8.0	4.7	chr17	42535586	42536003	(40721438)	+	L2c	LINE/L2	2938	3387	(0)	1615843
3928	10.0	0.2	0.0	chr17	43352269	43352788	(39904653)	C	MER41C	LTR/ERV1	(0)	521	1	1617616
3905	10.1	0.7	0.0	chr17	43352789	43353333	(39904108)	C	PRIMA41-int	LTR/ERV1	(0)	7756	7208	1617616
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
11	9.0	4.7	8.9	chr17	48627793	48627835	(34629606)	+	(TCCTGC)n	Simple_repeat	1	45	(0)	1628160
4579	9.7	2.2	1.0	chr17	48825536	48825977	(34431464)	C	MER41B	LTR/ERV1	(184)	450	1	1628573
495	29.0	7.1	0.0	chr17	48826001	48826169	(34431272)	+	MIRb	SINE/MIR	20	201	(67)	1628576
3820	10.5	2.1	0.4	chr17	49076572	49077089	(34180352)	C	MER41B	LTR/ERV1	(107)	527	1	1629162
822	24.3	3.8	1.0	chr17	49077101	49077304	(34180137)	C	LTR108e_Mam	LTR/ERVL	(28)	520	311	1629165
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2263	7.3	0.0	0.4	chr17	59842395	59842669	(23414772)	+	AluSx	SINE/Alu	1	274	(38)	1648068
517	18.1	0.0	1.2	chr17	59843641	59843723	(23413718)	+	AluJr	SINE/Alu	1	82	(230)	1648070
2192	8.6	3.6	0.3	chr17	59843731	59844022	(23413419)	+	AluSp	SINE/Alu	1	302	(11)	1648071
758	31.1	6.5	2.1	chr17	69048694	69049018	(14208423)	C	HAL1M8	LINE/L1	(2649)	342	3	1665151
237	26.9	17.0	0.0	chr17	75131946	75132101	(8125340)	+	Charlie2a	DNA/hAT-Charlie	182	369	(2492)	1675414
2309	9.0	0.0	0.0	chr17	75775945	75776234	(7481207)	+	AluSc	SINE/Alu	2	291	(18)	1676749
24	20.0	5.3	1.2	chr17	75896642	75896717	(7360724)	+	G-rich	Low_complexity	1	80	(0)	1676984
2818	13.1	3.6	0.0	chr17	76601713	76602163	(6655278)	C	MER41B	LTR/ERV1	(166)	468	1	1678372
2326	11.0	0.0	1.0	chr17	76602300	76602608	(6654833)	+	AluSx1	SINE/Alu	1	306	(6)	1678373
530	35.2	3.4	6.3	chr17	78257893	78258353	(4999088)	+	L2b	LINE/L2	2927	3373	(2)	1681507
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
864	20.7	6.5	2.5	chr17	79011382	79011619	(4245822)	C	L1ME3D	LINE/L1	(95)	6147	5900	1682844
4410	12.1	1.9	0.2	chr17	79011645	79012265	(4245176)	+	MER41B	LTR/ERV1	3	634	(0)	1682845
1650	14.5	0.7	0.0	chr17	82457198	82457479	(799962)	C	MER72	LTR/ERV1	(4)	718	435	1687666
1338	19.5	7.7	0.0	chr17	82457487	82457784	(799657)	C	MER72	LTR/ERV1	(399)	323	1	1687666
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
3583	7.4	2.6	0.0	chr18	874031	874487	(79498798)	C	MER41A	LTR/ERV1	(85)	469	1	1690658
11097	8.2	1.9	2.5	chr18	874488	876030	(79497255)	C	MER41-int	LTR/ERV1	(2)	5944	4411	1690658
2512	17.1	6.8	7.8	chr18	2992022	2992538	(77380747)	+	L1MB4	LINE/L1	5602	6138	(42)	1693555
418	21.3	12.2	6.5	chr18	3604749	3604964	(76768321)	+	MER112	DNA/hAT-Charlie	5	234	(27)	1694735
2215	10.3	0.7	1.9	chr18	3661572	3661881	(76711404)	C	AluSq	SINE/Alu	(7)	306	1	1694855
2377	27.4	9.4	3.1	chr18	3661895	3662989	(76710296)	+	MLT1H1-int	LTR/ERVL-MaLR	99	1368	(121)	1694854
616	22.7	3.0	0.0	chr18	3664290	3664417	(76708868)	+	MLT1H1	LTR/ERVL-MaLR	417	548	(7)	1694854
456	34.6	3.6	7.9	chr18	3664547	3664838	(76708447)	+	L2b	LINE/L2	3096	3374	(1)	1694859
20968	7.0	1.1	2.1	chr18	8877339	8881515	(71491770)	C	HERVIP10FH-int	LTR/ERV1	(2)	7735	687	1702053
8295	7.5	1.9	3.0	chr18	8881493	8882638	(71490647)	C	HERVIP10FH-int	LTR/ERV1	(6309)	1428	340	1702053
1793	14.6	2.1	1.4	chr18	9005960	9006240	(71367045)	+	AluJr	SINE/Alu	14	296	(16)	1702250
2753	12.8	9.5	2.2	chr18	9016734	9016919	(71356366)	C	LTR64	LTR/ERV1	(338)	190	2	1702275
7327	18.6	3.1	5.0	chr18	9876145	9876951	(70496334)	+	L1MC3	LINE/L1	7004	7785	(0)	1703784
448	10.8	11.7	0.0	chr18	9877074	9877156	(70496129)	+	LTR45C	LTR/ERV1	1	94	(445)	1703790
300	26.0	12.5	1.9	chr18	9960776	9960932	(70412353)	C	L1ME3Cz	LINE/L1	(148)	849	674	1703926
387	22.6	13.1	0.9	chr18	10525718	10525824	(69847461)	+	L2a	LINE/L2	3305	3426	(0)	1704652
1146	17.1	0.7	0.2	chr18	20911210	20940381	(59432904)	+	ALR/Alpha	Satellite/centr	1	29332	(0)	1711654
1925	16.5	9.3	1.9	chr18	22468269	22468645	(57904640)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1714603
4657	9.1	0.6	1.6	chr18	46161722	46162235	(34211050)	C	MER41B	LTR/ERV1	(118)	516	2	1748151
7554	19.4	3.9	1.2	chr18	49273992	49275594	(31097691)	C	L1MB8	LINE/L1	(1)	6177	4527	1753231
12	19.7	6.2	2.0	chr19	2820169	2820216	(55797400)	+	G-rich	Low_complexity	1	51	(0)	1801709
13	17.1	0.0	8.5	chr19	3367228	3367274	(55250342)	+	G-rich	Low_complexity	1	47	(0)	1803069
32	0.0	0.0	0.0	chr19	3367348	3367377	(55250239)	+	(GATTCTG)n	Simple_repeat	1	30	(0)	1803070
1219	20.2	5.4	0.8	chr19	5627198	5627444	(52990172)	+	AluJr	SINE/Alu	1	259	(53)	1808480
2334	7.6	0.0	1.0	chr19	6371910	6372210	(52245406)	C	AluSx	SINE/Alu	(14)	298	1	1810085
655	23.1	6.2	7.6	chr19	6372211	6372265	(52245351)	C	L1MC5	LINE/L1	(230)	9074	9015	1810084
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
15	24.5	4.7	1.5	chr19	13097937	13098001	(45519615)	+	(GCCCGC)n	Simple_repeat	1	67	(0)	1825870
232	3.5	0.0	0.0	chr19	13155390	13155418	(45462198)	+	MIRc	SINE/MIR	120	148	(120)	1825988
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
601	23.6	9.0	1.2	chr19	16890644	16890806	(41726810)	+	MLT1C	LTR/ERVL-MaLR	6	182	(285)	1835018
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
12	23.3	0.0	0.0	chr19	18292355	18292389	(40325227)	+	G-rich	Low_complexity	1	35	(0)	1838555
16	24.4	1.6	4.7	chr19	18323042	18323104	(40294512)	+	(CGC)n	Simple_repeat	1	64	(0)	1838616
364	27.8	6.5	0.9	chr19	18417204	18417319	(40200297)	+	L2c	LINE/L2	3260	3382	(5)	1838866
217	26.3	4.8	9.2	chr19	18417406	18417514	(40200102)	+	MIRc	SINE/MIR	23	126	(142)	1838867
13	19.8	0.0	2.7	chr19	18419535	18419571	(40198045)	+	G-rich	Low_complexity	1	37	(0)	1838871
13	23.9	1.6	6.5	chr19	18419579	18419639	(40197977)	+	(GGC)n	Simple_repeat	1	62	(0)	1838872
357	25.0	6.0	4.1	chr19	28607296	28607441	(30010175)	+	HERVE-int	LTR/ERV1	312	460	(7143)	1849048
33644	14.7	1.4	1.7	chr19	28607468	28613524	(30004092)	+	HERVE-int	LTR/ERV1	512	6548	(1265)	1849048
1770	18.7	0.0	1.9	chr19	28615532	28615847	(30001769)	+	AluJb	SINE/Alu	1	310	(2)	1849050
387	27.6	4.6	2.0	chr19	29605758	29605913	(29011703)	C	MIR3	SINE/MIR	(52)	156	1	1850483
1105	11.6	3.6	1.0	chr19	32686829	32687020	(25930596)	C	LTR51	LTR/ERV1	(78)	593	397	1855306
451	7.8	3.0	0.0	chr19	32687022	32687085	(25930531)	+	MER41B	LTR/ERV1	1	66	(568)	1855307
615	12.3	19.7	0.0	chr19	32687086	32687199	(25930417)	+	LTR9	LTR/ERV1	1	142	(470)	1855308
908	11.4	0.0	1.5	chr19	32687220	32687352	(25930264)	+	LTR9	LTR/ERV1	198	328	(284)	1855308
29	18.4	5.3	7.6	chr19	34254583	34254771	(24362845)	+	G-rich	Low_complexity	1	184	(0)	1858260
4376	7.0	1.3	0.0	chr19	35204673	35205219	(23412397)	C	MER41A	LTR/ERV1	(0)	554	1	1859931
555	25.1	10.3	1.4	chr19	35205270	35205548	(23412068)	C	L2b	LINE/L2	(195)	3231	2931	1859932
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
210	29.2	20.3	0.0	chr19	39445119	39445224	(19172392)	+	MIRb	SINE/MIR	23	155	(113)	1869089
280	32.5	0.0	5.5	chr19	41308838	41308964	(17308652)	+	L2b	LINE/L2	2847	2966	(453)	1873117
284	37.1	2.0	2.0	chr19	41308996	41309141	(17308475)	C	Charlie4z	DNA/hAT-Charlie	(20)	147	2	1873118
2733	25.7	10.0	3.5	chr19	42010086	42010825	(16606791)	+	L1MEc	LINE/L1	1124	1935	(4465)	1874353
18	8.0	0.0	0.0	chr19	43670083	43670109	(14947507)	+	(AGC)n	Simple_repeat	1	27	(0)	1877379
2086	12.9	0.0	1.1	chr19	44589333	44589619	(14027997)	C	AluSz6	SINE/Alu	(28)	284	1	1879058
2651	13.5	2.4	1.0	chr19	44589710	44590120	(14027496)	+	MSTC	LTR/ERVL-MaLR	1	417	(11)	1879059
13	19.6	0.0	0.0	chr19	44593959	44593988	(14023628)	+	(AATG)n	Simple_repeat	1	30	(0)	1879069
8934	1.4	0.0	0.0	chr19	44594096	44595063	(14022553)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1879070
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
411	26.8	1.7	8.9	chr19	46192140	46192285	(12425331)	+	MIR	SINE/MIR	16	149	(113)	1883092
2382	10.2	0.0	0.3	chr19	46192415	46192718	(12424898)	C	AluSg	SINE/Alu	(7)	303	1	1883093
2633	19.0	1.9	5.8	chr19	46193221	46193729	(12423887)	+	Tigger7	DNA/TcMar-Tigger	94	580	(1911)	1883094
2053	12.7	0.0	0.4	chr19	46194540	46194814	(12422802)	+	AluSx1	SINE/Alu	1	274	(38)	1883096
1799	17.6	1.4	0.3	chr19	46195020	46195308	(12422308)	C	AluSz	SINE/Alu	(16)	296	5	1883100
528	28.6	6.3	1.8	chr19	46195320	46195547	(12422069)	+	LTR24B	LTR/ERV1	187	425	(151)	1883101
2447	13.0	13.4	0.7	chr19	46202976	46203386	(12414230)	C	LTR7C	LTR/ERV1	(0)	471	1	1883114
1487	9.0	1.0	1.0	chr19	48254471	48254670	(10362946)	+	AluSx3	SINE/Alu	1	200	(111)	1888294
2155	15.2	6.5	3.7	chr19	48254703	48255085	(10362531)	+	MER65A	LTR/ERV1	3	406	(39)	1888295
3556	14.0	3.9	3.4	chr19	48878026	48878237	(9739379)	C	MER41E	LTR/ERV1	(0)	595	367	1889843
2143	12.0	1.3	1.0	chr19	48878238	48878538	(9739078)	C	AluSz	SINE/Alu	(4)	308	7	1889844
819	11.0	0.0	0.0	chr19	48882278	48882395	(9735221)	+	MER41B	LTR/ERV1	13	130	(504)	1889855
4069	6.2	0.0	0.0	chr19	48882411	48882938	(9734678)	C	LTR10C	LTR/ERV1	(0)	591	64	1889856
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
29	16.8	0.0	0.0	chr19	51478932	51478980	(7138636)	+	(AC)n	Simple_repeat	1	49	(0)	1895708
3365	17.9	4.7	2.4	chr19	51539971	51540778	(7076838)	+	L1MA7	LINE/L1	5526	6290	(1)	1895790
65	34.6	3.9	3.2	chr19	51552573	51553081	(7064535)	+	G-rich	Low_complexity	1	529	(0)	1895807
2519	19.1	6.9	3.3	chr19	51567105	51567613	(7050003)	C	MER63C	DNA/hAT-Blackjack	(116)	814	307	1895821
622	14.3	0.0	0.0	chr19	51567752	51567835	(7049781)	+	AluJr	SINE/Alu	1	84	(228)	1895823
272	31.5	8.0	0.0	chr19	51567774	51567865	(7049751)	C	SVA_B	Retroposon/SVA	(1076)	307	208	1895824
4289	7.3	0.5	0.2	chr19	51787119	51787670	(6829946)	+	MER41A	LTR/ERV1	1	554	(0)	1896255
2405	15.3	0.5	2.1	chr19	53517232	53517618	(5099998)	+	LTR62	LTR/ERVL	1	381	(328)	1899500
3882	10.5	2.4	0.7	chr19	56347038	56347582	(2270034)	C	LTR6A	LTR/ERV1	(0)	564	11	1905657
5032	13.4	2.1	1.1	chr19	56347586	56348341	(2269275)	+	HUERS-P3-int	LTR/ERV1	2490	3253	(5666)	1905658
13	21.7	4.7	6.7	chr19	58408437	58408521	(209095)	+	(CAACGCC)n	Simple_repeat	1	89	(0)	1909481
4767	8.3	0.9	2.0	chr2	9169203	9169843	(233023686)	C	MER41B	LTR/ERV1	(0)	634	1	1922479
312	23.9	4.1	0.0	chr2	9170003	9170073	(233023456)	+	MER105	DNA/hAT-Charlie	1	74	(129)	1922480
21	21.0	2.8	4.1	chr2	10448241	10448311	(231745218)	+	(CGG)n	Simple_repeat	1	73	(0)	1924773
650	26.4	7.2	3.6	chr2	11919787	11920092	(230273437)	C	L1M5	LINE/L1	(1917)	4229	3912	1927467
489	27.1	14.8	3.5	chr2	11920135	11920509	(230273020)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	59	1927471
4775	9.9	1.3	0.2	chr2	12083869	12084495	(230109034)	+	MER41B	LTR/ERV1	1	634	(0)	1927744
191	32.1	5.4	5.4	chr2	15561456	15561567	(226631962)	+	MIRc	SINE/MIR	45	156	(112)	1932920
211	32.6	10.6	1.7	chr2	15561672	15561852	(226631677)	C	L2c	LINE/L2	(164)	3223	3025	1932916
1354	17.0	8.8	1.4	chr2	20506928	20507320	(221686209)	+	L1MD	LINE/L1	5068	5491	(751)	1940492
19	24.8	5.6	2.1	chr2	23940376	23940464	(218253065)	+	(GCGCCC)n	Simple_repeat	1	94	(0)	1945145
15	21.9	0.0	2.3	chr2	23940659	23940702	(218252827)	+	G-rich	Low_complexity	1	44	(0)	1945146
1505	12.1	0.0	0.0	chr2	26411604	26411809	(215781720)	+	AluSc	SINE/Alu	88	293	(16)	1949912
15	3.2	12.5	0.0	chr2	26411833	26411864	(215781665)	+	(GTTT)n	Simple_repeat	1	36	(0)	1949913
1880	16.1	0.0	1.0	chr2	27006424	27006733	(215186796)	C	AluJr	SINE/Alu	(5)	307	1	1951046
1323	25.7	12.0	3.5	chr2	27006734	27007144	(215186385)	C	MER34B	LTR/ERV1	(100)	465	4	1951045
16	22.3	4.0	5.1	chr2	27071773	27071847	(215121682)	+	(GGCTGG)n	Simple_repeat	1	78	(0)	1951130
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
19	21.4	5.8	3.3	chr2	27380396	27380481	(214813048)	+	(CCCCTGA)n	Simple_repeat	1	91	(0)	1951696
12	22.0	1.9	5.6	chr2	27380532	27380584	(214812945)	+	(CCGGCCT)n	Simple_repeat	1	54	(0)	1951697
14	9.3	0.0	0.0	chr2	27380692	27380714	(214812815)	+	(GCC)n	Simple_repeat	1	23	(0)	1951698
2597	11.5	0.3	4.3	chr2	30252059	30252380	(211941149)	+	THE1C	LTR/ERVL-MaLR	1	319	(56)	1956642
2456	7.1	0.0	0.0	chr2	30252381	30252675	(211940854)	+	AluY	SINE/Alu	1	295	(16)	1956643
2597	11.5	0.3	4.3	chr2	30252676	30252743	(211940786)	+	THE1C	LTR/ERVL-MaLR	320	375	(0)	1956642
12	21.7	0.0	0.0	chr2	32039562	32039593	(210153936)	+	(CCCCGA)n	Simple_repeat	1	32	(0)	1959375
13	24.4	0.0	4.3	chr2	38376977	38377023	(203816506)	+	G-rich	Low_complexity	1	47	(0)	1969097
247	22.4	3.3	0.0	chr2	39123868	39123925	(203069604)	+	L3	LINE/CR1	4035	4094	(5)	1970600
683	25.6	1.0	0.5	chr2	39140265	39140456	(203053073)	C	MIR	SINE/MIR	(0)	262	70	1970640
277	30.0	6.4	9.1	chr2	39149984	39150120	(203043409)	+	MLT1H2	LTR/ERVL-MaLR	199	330	(219)	1970659
766	19.9	7.0	2.9	chr2	39150209	39150439	(203043090)	+	MLT1H2	LTR/ERVL-MaLR	284	555	(0)	1970659
4212	8.2	0.6	1.6	chr2	39468180	39468739	(202724790)	+	MER41A	LTR/ERV1	1	554	(0)	1971259
190	30.1	16.3	1.9	chr2	47297728	47297832	(194895697)	+	MIRb	SINE/MIR	41	163	(105)	1983749
407	21.8	12.1	7.9	chr2	47297833	47297958	(194895571)	+	MamTip1	DNA/hAT-Tip100	1	128	(139)	1983750
3763	13.0	8.8	0.9	chr2	47297959	47298541	(194894988)	+	MER41B	LTR/ERV1	1	634	(0)	1983751
876	28.9	2.0	0.8	chr2	55099648	55099895	(187093634)	+	MIR	SINE/MIR	12	262	(0)	1995292
373	25.0	1.1	3.2	chr2	64854768	64854862	(177338667)	C	MLT1K	LTR/ERVL-MaLR	(80)	515	423	2010069
319	25.3	12.3	14.8	chr2	64854983	64855191	(177338338)	C	MLT1K	LTR/ERVL-MaLR	(373)	222	20	2010069
358	34.2	14.0	1.5	chr2	68438844	68439208	(173754321)	C	L2a	LINE/L2	(313)	3113	2701	2015613
2760	15.8	0.9	0.0	chr2	85497535	85497982	(156695547)	+	MER57A-int	LTR/ERV1	5344	5795	(392)	2040905
572	20.1	12.6	7.1	chr2	85497983	85498207	(156695322)	+	LTR54	LTR/ERV1	1	239	(271)	2040906
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
4327	10.9	3.5	1.0	chr2	96921850	96922343	(145271186)	+	MER41B	LTR/ERV1	1	509	(125)	2053011
18	18.6	0.0	5.6	chr2	101252681	101252734	(140940795)	+	(CGCCC)n	Simple_repeat	1	54	(0)	2059271
847	28.7	11.7	2.3	chr2	105467480	105467825	(136725704)	C	L2	LINE/L2	(1259)	2160	1788	2064996
4790	8.9	0.5	0.8	chr2	105467826	105468461	(136725068)	+	MER41B	LTR/ERV1	1	634	(0)	2064997
13	14.8	3.9	7.4	chr2	112646173	112646224	(129547305)	+	G-rich	Low_complexity	1	54	(0)	2075482
2525	15.0	6.9	0.0	chr2	119338578	119338998	(122854531)	C	LTR47A	LTR/ERVL	(0)	452	1	2085158
610	20.0	1.7	0.0	chr2	119339002	119339116	(122854413)	+	L1MC4	LINE/L1	7926	8042	(0)	2085145
323	31.4	12.4	1.4	chr2	121595861	121596088	(120597441)	C	MIRb	SINE/MIR	(8)	260	4	2088932
2422	7.0	0.0	0.0	chr2	127927107	127927404	(114266125)	+	AluSx3	SINE/Alu	1	298	(13)	2098289
1962	17.6	11.6	3.0	chr2	127927405	127927682	(114265847)	C	LTR54	LTR/ERV1	(175)	335	2	2098288
989	23.4	3.5	1.0	chr2	127927683	127927984	(114265545)	+	L1MB4	LINE/L1	2303	2612	(4905)	2098290
370	31.8	5.0	2.2	chr2	128442425	128442694	(113750835)	+	L1ME4a	LINE/L1	5730	6007	(117)	2099213
3988	7.2	2.7	0.0	chr2	128443279	128443816	(113749713)	C	MER41A	LTR/ERV1	(0)	554	2	2099214
1697	12.8	11.6	0.3	chr2	149563263	149563568	(92629961)	C	Tigger3a	DNA/TcMar-Tigger	(2)	346	2	2128230
1784	20.9	5.3	8.9	chr2	151288111	151288553	(90904976)	+	MLT1D	LTR/ERVL-MaLR	1	441	(64)	2130623
2653	11.2	13.6	0.0	chr2	151380467	151380905	(90812624)	C	LTR54	LTR/ERV1	(0)	510	3	2130784
3238	13.0	13.6	3.5	chr2	151381022	151381191	(90812338)	+	MER39	LTR/ERV1	1	186	(521)	2130785
818	27.2	13.2	1.4	chr2	166338015	166338308	(75855221)	+	LTR87	LTR/ERVL?	71	404	(220)	2150879
1752	9.6	0.0	0.0	chr2	166356959	166357207	(75836322)	C	L1PA13	LINE/L1	(4)	6159	5911	2150912
832	28.1	6.6	8.9	chr2	166357208	166357326	(75836203)	C	L1ME4b	LINE/L1	(458)	434	324	2150911
3313	14.6	2.4	0.4	chr2	166357332	166357869	(75835660)	+	LTR73	LTR/ERV1	1	549	(23)	2150913
6844	18.1	6.5	0.4	chr2	169006588	169007374	(73186155)	+	L1M4	LINE/L1	4151	5018	(1128)	2154378
327	27.4	13.8	1.9	chr2	169583866	169583973	(72609556)	+	MIRc	SINE/MIR	22	144	(124)	2155222
184	19.7	24.8	1.3	chr2	169584078	169584154	(72609375)	+	L2c	LINE/L2	3281	3381	(6)	2155223
1782	16.7	25.9	3.6	chr2	169711625	169712096	(72481433)	C	LTR18B	LTR/ERVL	(0)	614	1	2155456
11213	14.1	0.8	1.2	chr2	169712250	169713909	(72479620)	C	HERVL18-int	LTR/ERVL	(0)	6047	4394	2155456
2136	20.9	3.3	4.1	chr2	170248400	170248882	(71944647)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	27	2156353
266	33.1	4.5	0.0	chr2	170249107	170249233	(71944296)	C	LTR88a	LTR/Gypsy?	(377)	439	307	2156354
2034	25.5	7.2	2.9	chr2	170249510	170250203	(71943326)	+	Charlie7	DNA/hAT-Charlie	35	760	(1852)	2156355
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
1261	27.1	10.0	4.8	chr2	170264251	170264553	(71928976)	C	MLT1H1	LTR/ERVL-MaLR	(211)	344	3	2156369
679	29.6	9.3	3.9	chr2	170269052	170269385	(71924144)	+	MamRep137	DNA/TcMar-Tigger	136	489	(21)	2156377
1270	24.3	16.0	4.1	chr2	170269417	170269804	(71923725)	+	L1ME3G	LINE/L1	188	608	(316)	2156376
231	33.7	17.6	2.6	chr2	170324244	170324435	(71869094)	C	MamTip2	DNA/hAT-Tip100	(6)	299	73	2156448
343	27.8	8.6	10.4	chr2	173076036	173076236	(69117293)	C	L1M4b	LINE/L1	(6211)	656	460	2161104
1314	25.9	6.4	2.4	chr2	174569903	174570455	(67623074)	+	L1ME4a	LINE/L1	5524	6124	(0)	2163496
3350	15.6	1.5	0.6	chr2	177171081	177171621	(65021908)	C	LTR75_1	LTR/ERV1	(0)	546	1	2167207
1246	14.0	10.9	4.8	chr2	177171622	177171874	(65021655)	+	LTR54B	LTR/ERV1	39	312	(186)	2167206
2557	8.1	0.7	0.0	chr2	177225642	177225938	(64967591)	+	AluY	SINE/Alu	1	299	(12)	2167303
4308	15.5	5.1	1.6	chr2	177665945	177666904	(64526625)	C	L1MB8	LINE/L1	(32)	6146	5146	2167927
423	28.1	8.7	2.5	chr2	178075002	178075205	(64118324)	C	LTR33	LTR/ERVL	(0)	515	298	2168506
4293	6.8	1.6	0.0	chr2	191599641	191600185	(50593344)	+	MER41A	LTR/ERV1	1	554	(0)	2186120
4841	2.5	0.2	0.2	chr2	201126038	201126595	(41066934)	C	LTR6B	LTR/ERV1	(0)	558	1	2199587
480	27.2	16.2	1.4	chr2	201126596	201126815	(41066714)	+	LTR67B	LTR/ERVL	338	596	(24)	2199588
4325	12.6	2.8	1.0	chr2	204354054	204354744	(37838785)	C	LTR62	LTR/ERVL	(5)	704	1	2205503
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
1399	19.0	3.0	9.3	chr2	207798197	207798423	(34395106)	+	MER63B	DNA/hAT-Blackjack	106	339	(97)	2210720
4511	8.9	3.0	0.2	chr2	207798424	207799038	(34394491)	+	MER41B	LTR/ERV1	1	633	(1)	2210721
2103	11.9	6.2	0.0	chr2	230654434	230654769	(11538760)	C	MER51B	LTR/ERV1	(19)	358	1	2245452
4276	6.1	2.5	0.9	chr2	230654862	230655291	(11538238)	+	MER41A	LTR/ERV1	1	436	(118)	2245453
3939	12.7	5.5	0.2	chr2	237964102	237964701	(4228828)	C	MER41B	LTR/ERV1	(0)	634	1	2257155
5181	10.9	3.9	2.9	chr2	237964702	237964854	(4228675)	+	MER4D1	LTR/ERV1	750	899	(1)	2257153
469	12.5	10.2	0.0	chr2	237964858	237964945	(4228584)	+	MIR	SINE/MIR	101	198	(64)	2257156
20	12.1	0.0	0.0	chr2	241637183	241637218	(556311)	+	(CCCGCC)n	Simple_repeat	1	36	(0)	2261472
12	20.4	5.6	3.5	chr2	241637639	241637692	(555837)	+	(GCGTC)n	Simple_repeat	1	57	(0)	2261473
210	32.3	13.8	1.5	chr20	266606	266941	(64177226)	C	L2a	LINE/L2	(133)	3293	2910	2262508
422	32.4	5.8	3.5	chr20	2578453	2578737	(61865430)	C	L1M6	LINE/L1	(6081)	415	124	2267199
3883	9.3	3.1	2.5	chr20	3665872	3666037	(60778130)	C	MER41A	LTR/ERV1	(377)	177	1	2269281
13	24.0	0.0	0.0	chr20	6006258	6006296	(58437871)	+	(GCGCGCG)n	Simple_repeat	1	39	(0)	2273691
363	22.5	2.2	1.7	chr20	31573376	31573489	(32870678)	+	MIR	SINE/MIR	30	146	(62)	2306295
289	33.1	0.8	3.3	chr20	31661986	31662122	(32782045)	C	MIR	SINE/MIR	(46)	162	29	2306560
235	36.1	6.6	0.0	chr20	31662140	31662294	(32781873)	+	L2b	LINE/L2	2725	2890	(529)	2306561
1002	25.5	0.9	0.9	chr20	31676226	31676447	(32767720)	C	MIR	SINE/MIR	(24)	238	17	2306602
46	2.2	0.0	0.0	chr20	32277699	32277744	(32166423)	+	(CGC)n	Simple_repeat	1	46	(0)	2308087
261	32.0	8.3	1.6	chr20	34680774	34680897	(29763270)	+	MIR	SINE/MIR	130	262	(0)	2313603
241	25.0	8.9	1.1	chr20	34680899	34680991	(29763176)	+	LTR85a	LTR/Gypsy?	19	119	(583)	2313604
1080	16.3	0.5	0.5	chr20	34681063	34681259	(29762908)	+	L1MB8	LINE/L1	5004	5200	(946)	2313605
554	24.1	13.6	1.6	chr20	35084842	35085086	(29359081)	+	HAL1	LINE/L1	2062	2340	(167)	2314464
1836	18.3	1.4	0.3	chr20	35085332	35085626	(29358541)	+	AluJo	SINE/Alu	1	298	(14)	2314467
2161	17.8	9.2	3.3	chr20	36083085	36083264	(28360903)	+	MLT2B1	LTR/ERVL	268	490	(30)	2316807
3733	7.5	0.9	10.3	chr20	36083265	36083722	(28360445)	+	MER41A	LTR/ERV1	1	463	(91)	2316809
2151	14.1	2.8	3.0	chr20	37542174	37542568	(26901599)	C	LTR47A2	LTR/ERVL	(38)	394	1	2320221
1259	16.9	8.3	10.4	chr20	37542579	37542703	(26901464)	+	L1ME2z	LINE/L1	6071	6200	(244)	2320220
4293	12.9	0.3	0.5	chr20	40948257	40948880	(23495287)	C	MER41B	LTR/ERV1	(9)	625	3	2326752
774	26.2	4.1	5.7	chr20	45836900	45837146	(18607021)	+	MIRb	SINE/MIR	26	268	(0)	2336335
1080	28.3	3.0	2.5	chr20	47501131	47501489	(16942678)	C	L1MC4	LINE/L1	(460)	7582	7222	2340294
319	22.9	22.4	0.0	chr20	47501517	47501634	(16942533)	+	MIR	SINE/MIR	111	262	(0)	2340295
4551	11.9	0.6	0.3	chr20	48139141	48139772	(16304395)	C	MER41B	LTR/ERV1	(0)	634	1	2341528
224	38.8	8.8	3.9	chr20	48139773	48139983	(16304184)	C	L2c	LINE/L2	(146)	3241	3020	2341527
294	33.1	4.9	4.3	chr20	50350767	50350927	(14093240)	+	MIRb	SINE/MIR	26	187	(81)	2346700
595	15.4	0.0	0.0	chr20	50350930	50351020	(14093147)	+	Tigger4b	DNA/TcMar-Tigger	1	91	(270)	2346701
2882	15.6	0.8	1.0	chr20	50351016	50351520	(14092647)	+	Tigger4	DNA/TcMar-Tigger	2218	2721	(10)	2346702
323	23.6	12.9	9.0	chr20	50903487	50903686	(13540481)	+	MIRb	SINE/MIR	51	259	(9)	2348005
4331	10.9	0.6	6.2	chr20	51338509	51339180	(13104987)	C	MER41B	LTR/ERV1	(0)	634	1	2348941
646	26.2	15.5	0.0	chr20	51339197	51339398	(13104769)	C	MIR	SINE/MIR	(11)	251	13	2348942
341	28.9	4.5	0.8	chr20	58252144	58252272	(6191895)	C	MIR	SINE/MIR	(58)	204	71	2362642
2305	10.4	0.0	1.0	chr20	59012000	59012308	(5431859)	C	AluSq2	SINE/Alu	(7)	306	1	2363807
4360	11.5	1.3	2.2	chr20	59012309	59012469	(5431698)	C	MER41B	LTR/ERV1	(478)	156	1	2363806
2257	8.4	1.1	0.0	chr20	63263699	63263982	(1180185)	+	AluSc	SINE/Alu	5	291	(18)	2369435
1878	17.1	15.1	7.1	chr20	63263983	63264209	(1179958)	C	LTR54	LTR/ERV1	(275)	235	1	2369433
305	35.1	14.0	4.0	chr21	8994800	8995099	(37714884)	+	L1M5	LINE/L1	4807	5141	(1005)	2374115
305	24.8	13.7	0.0	chr21	14751043	14751143	(31958840)	+	MIRc	SINE/MIR	21	137	(131)	2378263
511	36.2	10.2	2.2	chr21	14751128	14751633	(31958350)	+	L2a	LINE/L2	2756	3307	(119)	2378264
3028	24.4	5.6	1.8	chr21	14754141	14755216	(31954767)	+	L1MB1	LINE/L1	1984	3045	(5393)	2378267
1357	26.4	9.7	8.1	chr21	24272433	24273157	(22436826)	+	LTR19C	LTR/ERV1	1	779	(0)	2390888
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
198	35.5	4.8	2.5	chr21	29305960	29306040	(17403943)	C	L2c	LINE/L2	(158)	3229	3147	2398098
180	37.5	0.0	2.7	chr21	29656498	29656571	(17053412)	+	MER5A	DNA/hAT-Charlie	69	140	(49)	2398648
291	37.5	3.8	4.1	chr21	29656797	29657103	(17052880)	+	X6B_LINE	LINE/CR1	759	1065	(7)	2398649
291	32.8	4.9	0.0	chr21	34982868	34982983	(11727000)	C	MIRb	SINE/MIR	(113)	155	34	2407432
423	29.6	4.9	6.8	chr21	35399155	35399404	(11310579)	+	MamTip1	DNA/hAT-Tip100	5	249	(18)	2408063
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
8432	7.5	2.5	0.0	chr21	39358522	39359592	(7350391)	+	PRIMA41-int	LTR/ERV1	6659	7756	(0)	2414432
2415	9.8	1.1	5.7	chr21	39359593	39359961	(7350022)	+	MER41C	LTR/ERV1	1	352	(169)	2414432
2175	12.7	1.0	1.0	chr21	39447411	39447718	(7262265)	C	AluSz	SINE/Alu	(4)	308	1	2414611
1365	21.4	9.1	3.5	chr21	39447856	39448290	(7261693)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	1	2414612
3001	24.2	3.4	3.4	chr21	42336604	42337813	(4372170)	+	L1ME1	LINE/L1	5043	6247	(0)	2418738
8795	13.3	10.0	2.6	chr21	42976090	42977537	(3732446)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	814	2419665
2478	5.9	1.0	1.3	chr21	44016650	44016954	(2693029)	C	AluY	SINE/Alu	(7)	304	1	2421186
3130	17.4	4.8	3.0	chr21	44877421	44877939	(1832044)	+	ERV24B_Prim-int	LTR/ERV1	3274	3798	(3815)	2422273
4100	10.3	4.7	1.9	chr21	44877940	44878554	(1831429)	C	LTR10E	LTR/ERV1	(0)	633	1	2422276
4666	15.1	3.2	1.2	chr21	44878574	44879415	(1830568)	+	ERV24B_Prim-int	LTR/ERV1	4939	5808	(1805)	2422273
2256	10.5	0.7	0.0	chr21	44879416	44879709	(1830274)	+	AluSx	SINE/Alu	1	296	(16)	2422277
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
3898	11.0	0.7	0.6	chr21	46518871	46519419	(190564)	C	MER41B	LTR/ERV1	(84)	550	1	2424092
3263	10.1	3.1	2.3	chr21	46519420	46519855	(190128)	C	MER41-int	LTR/ERV1	(0)	5946	5505	2424092
2718	1.1	0.0	0.0	chr22	16677656	16677967	(34140501)	C	AluYa5	SINE/Alu	(0)	311	1	2427682
252	33.7	4.7	10.9	chr22	16718646	16718875	(34099593)	C	MIRb	SINE/MIR	(27)	241	27	2427721
1077	18.6	6.7	9.3	chr22	16780893	16781051	(34037417)	C	L1MA8	LINE/L1	(0)	6291	6130	2427811
1967	15.6	0.0	0.3	chr22	16781052	16781340	(34037128)	C	AluSz	SINE/Alu	(21)	291	4	2427812
208	36.8	9.0	1.3	chr22	16784855	16785008	(34033460)	C	L2	LINE/L2	(684)	2735	2569	2427818
282	28.4	3.3	2.2	chr22	18028405	18028494	(32789974)	C	MIR3	SINE/MIR	(32)	176	86	2430078
197	31.8	5.4	2.2	chr22	18028501	18028590	(32789878)	+	L3	LINE/CR1	3169	3261	(838)	2430079
2446	7.4	0.0	0.6	chr22	19200559	19200869	(31617599)	+	AluYh3	SINE/Alu	1	309	(2)	2431601
190	37.9	16.0	3.1	chr22	19201805	19202472	(31615996)	+	L2a	LINE/L2	699	1468	(1951)	2431602
14547	12.4	3.0	5.6	chr22	19259388	19260493	(31557975)	+	Tigger1	DNA/TcMar-Tigger	55	1181	(1237)	2431681
197	27.7	14.4	0.0	chr22	19290549	19290631	(31527837)	+	MIR3	SINE/MIR	60	156	(52)	2431740
241	30.2	13.5	0.0	chr22	19290736	19290831	(31527637)	+	MIRb	SINE/MIR	37	147	(121)	2431741
6924	12.8	2.6	6.9	chr22	19302429	19303065	(31515403)	+	PRIMAX-int	LTR/ERV1	977	1610	(2492)	2431757
409	25.0	28.4	1.3	chr22	19463125	19463503	(31354965)	C	L1MEd	LINE/L1	(5857)	1246	762	2432043
6265	18.5	2.7	1.6	chr22	19489738	19490363	(31328105)	C	L1MD1	LINE/L1	(3454)	3083	2448	2432089
3872	15.5	5.8	8.2	chr22	19580634	19580948	(31237520)	+	L1MB3	LINE/L1	5286	5602	(581)	2432253
978	20.9	9.8	0.8	chr22	19866878	19867138	(30951330)	+	L1M5	LINE/L1	5536	5822	(357)	2432634
1067	25.1	7.9	9.3	chr22	19867163	19867697	(30950771)	C	L1MEf	LINE/L1	(262)	2394	1631	2432625
347	30.0	17.5	2.9	chr22	20081590	20082044	(30736424)	+	L2a	LINE/L2	2239	2781	(638)	2432893
720	25.7	14.1	2.6	chr22	20253576	20254163	(30564305)	+	HAL1ME	LINE/L1	790	1488	(1019)	2433050
707	29.9	16.3	3.9	chr22	20254451	20254711	(30563757)	+	HAL1ME	LINE/L1	1489	1765	(742)	2433050
3506	15.8	3.1	5.5	chr22	20539411	20540001	(30278467)	C	L1MB8	LINE/L1	(346)	5832	5224	2433513
376	5.1	3.3	0.0	chr22	20540025	20540083	(30278385)	C	Alu	SINE/Alu	(1)	300	240	2433518
232	17.4	0.0	8.0	chr22	20546084	20546133	(30272335)	C	L1MC5a	LINE/L1	(345)	2432	2387	2433532
311	26.2	8.0	2.3	chr22	20589063	20589191	(30229277)	+	MIRb	SINE/MIR	124	260	(8)	2433585
1699	13.3	5.4	0.4	chr22	20656294	20656572	(30161896)	C	HERV35I-int	LTR/ERV1	(4087)	2831	2538	2433708
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
13432	12.7	2.5	2.1	chr22	20677402	20677910	(30140558)	C	L1PB	LINE/L1	(2693)	3453	2918	2433724
2127	11.3	0.3	0.0	chr22	20757552	20757843	(30060625)	C	AluSz	SINE/Alu	(19)	293	1	2433863
19378	12.8	2.3	2.0	chr22	20826371	20827792	(29990676)	C	L1PA15	LINE/L1	(329)	6456	5035	2434005
966	14.4	0.0	0.0	chr22	20886155	20886286	(29932182)	C	FLAM_C	SINE/Alu	(10)	133	2	2434133
2271	10.7	1.3	1.0	chr22	20886299	20886608	(29931860)	C	AluSz	SINE/Alu	(1)	311	1	2434134
1515	25.7	9.5	4.1	chr22	20906219	20906826	(29911642)	+	L1ME4b	LINE/L1	234	877	(15)	2434188
410	30.8	7.1	5.2	chr22	21014709	21014996	(29803472)	+	L2b	LINE/L2	3035	3328	(47)	2434397
425	30.6	7.8	4.6	chr22	21045220	21045503	(29772965)	C	L2b	LINE/L2	(47)	3328	3035	2434449
208	19.4	0.0	0.0	chr22	21045593	21045628	(29772840)	+	MIRb	SINE/MIR	16	51	(217)	2434450
2294	10.0	0.0	0.0	chr22	21590188	21590497	(29227971)	C	AluSq2	SINE/Alu	(3)	310	1	2435490
653	33.4	18.7	2.1	chr22	21590498	21590863	(29227605)	C	L3	LINE/CR1	(2799)	1300	888	2435475
3569	23.6	9.6	4.9	chr22	21890199	21891019	(28927449)	+	L1MB4	LINE/L1	1071	1895	(4751)	2436143
1576	11.4	0.9	1.3	chr22	21896384	21896610	(28921858)	C	AluSx3	SINE/Alu	(0)	311	86	2436167
394	23.4	8.1	2.5	chr22	21896612	21896773	(28921695)	C	L1M5	LINE/L1	(1704)	4442	4271	2436168
371	20.9	5.7	9.4	chr22	21896775	21896923	(28921545)	C	FRAM	SINE/Alu	(3)	317	42	2436169
976	26.6	12.8	5.8	chr22	22062336	22063164	(28755304)	+	L1M4	LINE/L1	799	1694	(5823)	2436429
2070	14.4	1.3	0.3	chr22	22063438	22063742	(28754726)	C	AluSx3	SINE/Alu	(3)	308	1	2436430
4923	10.7	1.3	0.4	chr22	22077234	22077975	(28740493)	C	L1MA1	LINE/L1	(0)	6302	5554	2436445
13	23.3	2.5	0.0	chr22	22090880	22090919	(28727549)	+	A-rich	Low_complexity	1	41	(0)	2436462
392	31.8	6.4	1.1	chr22	22090920	22091097	(28727371)	+	L1MEg1	LINE/L1	3544	3731	(3506)	2436460
3478	23.1	3.7	2.5	chr22	22095157	22096680	(28721788)	+	L1PA16	LINE/L1	4614	6157	(9)	2436470
3990	19.2	2.8	0.5	chr22	22176209	22176973	(28641495)	+	LTR39	LTR/ERV1	1	783	(0)	2436562
1842	18.0	10.7	2.4	chr22	22236061	22236481	(28581987)	C	MER101	LTR/ERV1	(2)	472	13	2436638
337	27.5	1.3	4.5	chr22	22400719	22400874	(28417594)	C	LTR37B	LTR/ERV1	(1)	467	317	2436819
300	28.7	6.3	3.0	chr22	22410832	22411061	(28407407)	C	L1ME1	LINE/L1	(103)	6076	5839	2436825
14	4.5	0.0	4.0	chr22	22411127	22411151	(28407317)	+	(ATTT)n	Simple_repeat	1	25	(0)	2436826
15266	11.9	2.0	0.1	chr22	22411747	22414527	(28403941)	C	L1PB1	LINE/L1	(369)	5782	2949	2436827
235	16.7	2.3	0.0	chr22	22484680	22484721	(28333747)	C	MLT1M	LTR/ERVL-MaLR	(14)	658	616	2436920
925	27.5	9.2	2.2	chr22	22490768	22491169	(28327299)	+	L2a	LINE/L2	2994	3426	(0)	2436927
485	30.6	2.6	9.5	chr22	22495320	22495644	(28322824)	C	L2a	LINE/L2	(22)	3404	3103	2436935
12	21.6	0.0	4.9	chr22	22576440	22576480	(28241988)	+	G-rich	Low_complexity	1	41	(0)	2437106
3234	20.6	1.4	7.7	chr22	22582929	22583840	(28234628)	C	L1MA10	LINE/L1	(10)	6324	5471	2437115
1237	9.8	0.6	0.6	chr22	22583841	22584004	(28234464)	C	AluSq10	SINE/Alu	(149)	164	1	2437116
55	0.0	0.0	0.0	chr22	22760934	22760980	(28057488)	+	(TG)n	Simple_repeat	1	47	(0)	2437350
443	30.7	4.3	1.4	chr22	22903065	22903358	(27915110)	C	L1MC5	LINE/L1	(8)	9296	8994	2437527
391	26.3	4.0	0.0	chr22	28025360	28025454	(22793014)	C	MIRb	SINE/MIR	(165)	103	5	2447881
1603	17.5	6.1	2.1	chr22	28025600	28025884	(22792584)	+	AluJo	SINE/Alu	1	297	(15)	2447882
2230	9.1	0.3	0.0	chr22	33014500	33014786	(17803682)	+	AluSp	SINE/Alu	2	289	(24)	2458194
14360	11.0	5.1	5.7	chr22	39108063	39108975	(11709493)	+	MER57-int	LTR/ERV1	6568	7534	(3)	2470892
2875	15.6	12.1	0.2	chr22	40814035	40814665	(10003803)	+	LTR62	LTR/ERVL	1	709	(0)	2474419
14	24.1	8.1	2.1	chr22	50526145	50526230	(292238)	+	G-rich	Low_complexity	1	93	(0)	2490810
910	30.7	7.5	1.8	chr3	4506165	4506685	(193788874)	+	L2a	LINE/L2	2853	3409	(17)	2499133
1764	20.1	5.9	3.3	chr3	4506861	4507318	(193788241)	C	Charlie1b	DNA/hAT-Charlie	(0)	523	53	2499134
11	21.2	0.0	2.9	chr3	4815087	4815121	(193480438)	+	(TCTTGT)n	Simple_repeat	1	35	(0)	2499625
2212	11.1	1.0	0.0	chr3	4869199	4869495	(193426064)	C	AluSz	SINE/Alu	(12)	300	1	2499699
470	27.8	7.1	7.5	chr3	4994622	4994889	(193300670)	+	MamTip1	DNA/hAT-Tip100	1	267	(0)	2499923
340	24.8	0.0	2.8	chr3	9783105	9783212	(188512347)	+	L1ME2z	LINE/L1	6335	6439	(5)	2507946
398	19.8	2.8	0.9	chr3	9783229	9783335	(188512224)	+	L1MB2	LINE/L1	6047	6155	(16)	2507947
2089	12.5	0.7	1.3	chr3	9976106	9976408	(188319151)	C	AluSx1	SINE/Alu	(11)	301	1	2508389
12	15.6	5.4	0.0	chr3	9976409	9976421	(188319138)	+	(TTACTT)n	Simple_repeat	2	14	(0)	2508390
184	31.2	20.0	0.0	chr3	9976506	9976617	(188318942)	+	L3	LINE/CR1	3904	4043	(56)	2508391
253	30.2	8.1	2.4	chr3	14210991	14211155	(184084404)	+	MIR1_Amn	SINE/MIR	18	191	(77)	2516471
3566	17.5	13.4	0.3	chr3	14250990	14251701	(184043858)	C	LTR8B	LTR/ERV1	(0)	820	1	2516542
1042	24.5	7.6	9.8	chr3	14251702	14251717	(184043842)	+	L1ME2	LINE/L1	5936	5951	(213)	2516538
2643	5.8	0.0	0.0	chr3	14251718	14252026	(184043533)	+	AluY	SINE/Alu	1	309	(2)	2516543
689	22.6	11.0	1.6	chr3	14352195	14352383	(183943176)	+	MLT1H2	LTR/ERVL-MaLR	44	252	(237)	2516753
450	29.2	8.2	2.8	chr3	14645931	14646148	(183649411)	+	L2	LINE/L2	2771	3001	(418)	2517391
193	24.4	0.0	0.0	chr3	15064900	15064944	(183230615)	+	MIRb	SINE/MIR	124	168	(100)	2518110
173	37.6	0.0	2.3	chr3	15591846	15592544	(182703015)	+	(AT)n	Simple_repeat	1	699	(0)	2519110
194	24.7	8.3	4.9	chr3	15861320	15861400	(182434159)	+	MIRc	SINE/MIR	140	223	(45)	2519516
312	26.9	9.7	0.0	chr3	20323561	20323653	(177971906)	C	LTR46	LTR/ERV1	(357)	103	1	2526022
394	34.6	3.1	2.6	chr3	20323680	20323869	(177971690)	C	L2b	LINE/L2	(185)	3190	3000	2526021
2349	10.1	1.7	0.0	chr3	32048311	32048606	(166246953)	C	AluSq2	SINE/Alu	(12)	301	1	2543117
4543	12.1	2.0	0.8	chr3	32048690	32049315	(166246244)	+	MER41B	LTR/ERV1	1	634	(0)	2543118
350	23.6	0.9	7.8	chr3	37996618	37996732	(160298827)	+	MER94	DNA/hAT-Blackjack	5	111	(23)	2552383
29	0.0	0.0	0.0	chr3	39287989	39288013	(159007546)	+	(TG)n	Simple_repeat	1	25	(0)	2554289
14	8.4	0.0	3.7	chr3	39406156	39406182	(158889377)	+	(GATA)n	Simple_repeat	1	27	(0)	2554474
2286	9.5	0.0	0.3	chr3	40456496	40456790	(157838769)	+	AluSx3	SINE/Alu	2	295	(16)	2556018
1090	20.1	20.6	6.2	chr3	40456791	40456943	(157838616)	+	L1MC4	LINE/L1	7845	8041	(1)	2556016
332	33.3	10.2	1.6	chr3	41026676	41026980	(157268579)	C	L2	LINE/L2	(1325)	2094	1761	2556894
2559	15.5	2.8	0.7	chr3	43254293	43254707	(155040852)	+	MSTB	LTR/ERVL-MaLR	1	424	(2)	2560370
521	18.9	5.4	0.9	chr3	43584248	43584354	(154711205)	+	LTR18B	LTR/ERVL	1	112	(502)	2560826
1592	12.0	11.6	0.3	chr3	43584379	43584670	(154710889)	+	LTR18B	LTR/ERVL	286	614	(0)	2560826
423	20.6	10.2	4.1	chr3	44236865	44237056	(154058503)	+	MER34A	LTR/ERV1	431	586	(36)	2561773
1448	22.2	9.3	5.0	chr3	44237074	44237551	(154058008)	C	MER39	LTR/ERV1	(25)	682	1	2561774
492	28.5	6.6	0.9	chr3	44439445	44439674	(153855885)	+	LTR50	LTR/ERVL	349	592	(203)	2562104
1015	22.0	11.3	4.3	chr3	44439689	44440058	(153855501)	C	LTR52	LTR/ERVL	(14)	407	9	2562105
4308	8.9	3.0	2.7	chr3	44441213	44441528	(153854031)	C	MER41B	LTR/ERV1	(320)	314	1	2562107
288	25.4	6.3	6.9	chr3	44441529	44441540	(153854019)	C	L1ME3G	LINE/L1	(445)	479	468	2562106
208	34.8	2.8	0.0	chr3	44441542	44441610	(153853949)	C	MIRc	SINE/MIR	(129)	139	69	2562109
258	29.0	10.3	2.2	chr3	44441693	44441914	(153853645)	C	L1ME3Cz	LINE/L1	(66)	931	690	2562110
346	18.4	1.3	1.3	chr3	44477011	44477087	(153818472)	+	L1MB4	LINE/L1	6085	6161	(19)	2562164
5739	5.7	1.0	0.0	chr3	45053730	45054413	(153241146)	C	LTR8	LTR/ERV1	(0)	691	1	2563131
321	2.6	0.0	0.0	chr3	45061246	45061284	(153234275)	+	MER4C	LTR/ERV1	1	39	(426)	2563146
3845	11.1	0.7	2.0	chr3	45061285	45061704	(153233855)	+	MER41A	LTR/ERV1	1	415	(139)	2563147
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
856	19.5	4.5	1.7	chr3	45075912	45076083	(153219476)	C	MER45A	DNA/hAT-Tip100	(1)	177	1	2563184
13	4.8	4.5	0.0	chr3	45076152	45076173	(153219386)	+	(TGC)n	Simple_repeat	1	23	(0)	2563185
2460	10.5	0.8	0.8	chr3	45076355	45076709	(153218850)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2563186
34	7.0	0.0	0.0	chr3	45225151	45225195	(153070364)	+	(CGG)n	Simple_repeat	1	45	(0)	2563467
182	28.9	11.2	6.9	chr3	46407722	46407866	(151887693)	+	L2a	LINE/L2	3257	3408	(18)	2565346
2283	10.9	0.3	0.0	chr3	47788277	47788580	(150506979)	+	AluSp	SINE/Alu	2	306	(7)	2567980
237	32.7	10.7	2.2	chr3	50605466	50605696	(147689863)	C	Tigger15a	DNA/TcMar-Tigger	(308)	407	155	2573276
203	34.1	2.8	2.1	chr3	50605893	50606085	(147689474)	+	L2a	LINE/L2	2916	3112	(314)	2573277
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
295	22.9	0.9	2.7	chr3	53235995	53236082	(145059477)	C	MIRb	SINE/MIR	(160)	108	17	2577256
11	21.3	2.5	2.4	chr3	53236287	53236326	(145059233)	+	(GCAGAG)n	Simple_repeat	1	41	(0)	2577257
1736	15.7	18.1	1.7	chr3	53354817	53355238	(144940321)	C	LTR54	LTR/ERV1	(3)	507	1	2577507
533	34.3	1.0	6.9	chr3	53355239	53355353	(144940206)	+	L2a	LINE/L2	3014	3117	(309)	2577506
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
1109	22.1	1.3	12.2	chr3	101631538	101631872	(96663687)	+	AluJb	SINE/Alu	1	298	(4)	2643352
1102	11.4	1.3	1.3	chr3	101631887	101632044	(96663515)	C	AluSx	SINE/Alu	(8)	304	147	2643353
3604	12.4	3.0	1.1	chr3	101632045	101632597	(96662962)	+	LTR6A	LTR/ERV1	1	564	(0)	2643354
52313	17.9	1.7	1.8	chr3	101632600	101641508	(96654051)	+	HERVS71-int	LTR/ERV1	4	8909	(69)	2643354
3707	12.2	3.0	0.2	chr3	101641509	101642056	(96653503)	+	LTR6A	LTR/ERV1	1	564	(0)	2643355
712	20.8	2.6	7.5	chr3	101643829	101643989	(96651570)	+	L1M5	LINE/L1	5608	5760	(483)	2643340
4184	11.3	3.8	0.8	chr3	101643990	101644474	(96651085)	+	MER41B	LTR/ERV1	1	508	(126)	2643360
4033	9.2	0.2	0.0	chr3	127732958	127733510	(70562049)	+	MER41A	LTR/ERV1	1	554	(0)	2680572
344	27.7	11.2	2.5	chr3	129439637	129439758	(68855801)	C	MIR3	SINE/MIR	(19)	189	56	2683753
1839	17.2	0.0	0.3	chr3	135513179	135513504	(62782055)	+	HUERS-P1-int	LTR/ERV1	5939	6263	(0)	2692971
3438	11.4	4.6	2.1	chr3	135513505	135514076	(62781483)	+	LTR8	LTR/ERV1	1	587	(104)	2692971
3986	13.8	4.5	2.8	chr3	141312045	141312735	(56982824)	C	LTR62	LTR/ERVL	(5)	704	1	2702098
354	28.8	7.5	2.0	chr3	141737830	141738029	(56557530)	C	L2a	LINE/L2	(0)	3426	3165	2702770
212	32.8	14.1	5.0	chr3	146542893	146543232	(51752327)	C	L2b	LINE/L2	(127)	3299	2924	2709706
267	13.5	0.0	0.0	chr3	156620161	156620197	(41675362)	C	MER3	DNA/hAT-Charlie	(126)	83	47	2724311
378	22.1	4.6	2.8	chr3	156620256	156620362	(41675197)	C	MIR	SINE/MIR	(6)	256	148	2724312
2283	13.9	7.6	0.0	chr3	156620366	156620695	(41674864)	+	LTR18A	LTR/ERVL	1	357	(0)	2724313
15	13.9	0.0	0.0	chr3	157301359	157301382	(40994177)	+	(T)n	Simple_repeat	1	24	(0)	2725310
1409	30.7	15.8	4.0	chr3	157301389	157302337	(40993222)	+	L2c	LINE/L2	1726	2813	(606)	2725311
2333	11.3	0.0	0.0	chr3	158746609	158746910	(39548649)	+	AluSx	SINE/Alu	1	302	(10)	2727230
2642	11.0	0.5	1.1	chr3	170699688	170700064	(27595495)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2743453
273	24.1	0.9	14.3	chr3	170700065	170700163	(27595396)	+	L1ME3G	LINE/L1	731	812	(112)	2743452
2168	28.3	7.5	3.6	chr3	170726384	170727260	(27568299)	+	L2a	LINE/L2	858	1771	(1648)	2743500
231	31.1	11.8	4.4	chr3	170727261	170727643	(27567916)	+	L2-3_Crp	LINE/L2	590	1004	(1092)	2743501
49	0.0	0.0	0.0	chr3	177198866	177198907	(21096652)	+	(AC)n	Simple_repeat	1	42	(0)	2752769
428	25.4	10.8	3.4	chr3	177358979	177359157	(20936402)	C	MIRb	SINE/MIR	(70)	198	5	2753123
1809	14.5	5.0	1.4	chr3	184348221	184348509	(13947050)	+	AluJo	SINE/Alu	3	302	(10)	2764464
1974	17.6	1.1	0.3	chr3	185268043	185268408	(13027151)	+	MER66-int	LTR/ERV1	6304	6649	(27)	2766074
1019	16.2	0.0	0.0	chr3	185268413	185268579	(13026980)	+	MER41B	LTR/ERV1	1	167	(390)	2766074
3629	17.3	11.3	0.6	chr3	193590045	193590775	(4704784)	C	LTR8B	LTR/ERV1	(0)	820	1	2779738
249	31.5	10.6	9.7	chr3	193590776	193591060	(4704499)	C	Charlie8	DNA/hAT-Charlie	(2056)	372	74	2779737
3448	12.3	11.4	1.4	chr3	196842744	196843192	(1452367)	C	MER41B	LTR/ERV1	(124)	510	1	2785874
2252	24.8	3.7	4.0	chr3	196843223	196843275	(1452284)	C	LTR82A	LTR/ERVL	(0)	872	833	2785876
1823	14.7	4.2	0.0	chr3	196843276	196843568	(1451991)	C	AluJb	SINE/Alu	(4)	308	3	2785877
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
17	29.0	3.7	1.2	chr4	6716119	6716124	(183498431)	+	(GCGTGC)n	Simple_repeat	1	11	(73)	2798929
16	25.2	0.0	0.0	chr4	6716125	6716167	(183498388)	+	(GCGT)n	Simple_repeat	1	43	(0)	2798930
17	29.0	3.7	1.2	chr4	6716168	6716199	(183498356)	+	(GCGTGC)n	Simple_repeat	12	84	(0)	2798929
12	20.8	3.1	7.6	chr4	6716367	6716430	(183498125)	+	(CGC)n	Simple_repeat	1	66	(0)	2798931
2256	12.4	0.7	0.0	chr4	6732115	6732420	(183482135)	C	AluSz	SINE/Alu	(0)	312	5	2798964
17	20.4	8.5	2.2	chr4	6782459	6782540	(183432015)	+	(CCCGCAG)n	Simple_repeat	1	89	(0)	2799089
1885	20.1	11.1	2.5	chr4	8479318	8479868	(181734687)	C	Tigger3	DNA/TcMar-Tigger	(0)	3029	2426	2801801
10410	14.7	4.9	1.6	chr4	10172162	10174126	(180040429)	C	HERVK9-int	LTR/ERVK	(4104)	1992	1	2804250
2116	19.0	3.9	2.6	chr4	10182967	10183420	(180031135)	C	MER66B	LTR/ERV1	(0)	486	27	2804255
993	15.4	10.5	3.2	chr4	10183427	10183647	(180030908)	C	L1PA15	LINE/L1	(489)	5671	5433	2804254
475	27.1	0.8	12.2	chr4	40198975	40199252	(150015303)	+	MIR	SINE/MIR	5	250	(12)	2851476
2400	9.0	0.3	0.0	chr4	40239597	40239896	(149974659)	+	AluSz	SINE/Alu	1	301	(11)	2851557
114	28.6	0.3	0.3	chr4	48120101	48120392	(142094163)	+	(AT)n	Simple_repeat	1	293	(0)	2863313
238	29.2	7.3	3.3	chr4	55742565	55742656	(134471899)	+	L2c	LINE/L2	3291	3386	(1)	2871394
2718	13.4	10.4	4.4	chr4	55742770	55743339	(134471216)	+	LTR18B	LTR/ERVL	1	608	(6)	2871395
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
3992	10.3	0.4	1.1	chr4	74096175	74096724	(116117831)	C	MER41B	LTR/ERV1	(88)	546	1	2895701
1918	15.6	6.2	0.9	chr4	76234335	76234657	(113979898)	C	MER61A	LTR/ERV1	(0)	341	1	2898934
2420	22.5	11.7	16.7	chr4	78693589	78694457	(111520098)	C	LTR8B	LTR/ERV1	(0)	820	1	2902577
1273	28.5	1.3	0.0	chr4	78694460	78694768	(111519787)	C	HUERS-P1-int	LTR/ERV1	(3)	6260	5948	2902577
545	25.8	11.8	0.8	chr4	86934398	86934624	(103279931)	+	MIRc	SINE/MIR	15	264	(4)	2914646
1796	19.0	0.0	0.7	chr4	87391536	87391830	(102822725)	+	AluJo	SINE/Alu	2	294	(18)	2915433
1921	17.6	0.3	0.7	chr4	87422068	87422369	(102792186)	+	AluJb	SINE/Alu	1	301	(11)	2915482
25	26.9	1.7	5.0	chr4	99946616	99946732	(90267823)	+	(GGCGGC)n	Simple_repeat	1	119	(0)	2932376
2100	12.6	1.0	0.3	chr4	110249143	110249435	(79965120)	C	AluSg4	SINE/Alu	(15)	295	1	2946274
3946	14.7	3.9	3.6	chr4	110249436	110249475	(79965080)	C	LTR62	LTR/ERVL	(662)	47	15	2946273
455	29.9	11.5	1.7	chr4	122921914	122922148	(67292407)	C	MIRb	SINE/MIR	(1)	267	7	2963233
4509	14.2	4.4	0.7	chr4	123349123	123349802	(66864753)	C	LTR62	LTR/ERVL	(2)	707	2	2963818
300	32.7	15.5	0.9	chr4	123349991	123350215	(66864340)	+	L2a	LINE/L2	3152	3415	(11)	2963819
4052	9.9	3.0	0.3	chr4	150316667	150317245	(39897310)	C	MER41E	LTR/ERV1	(0)	595	1	2999581
232	28.2	6.4	9.7	chr4	177441443	177441587	(12772968)	C	L2c	LINE/L2	(125)	3262	3123	3036931
514	21.0	6.4	3.6	chr4	177441589	177441756	(12772799)	+	MER5B	DNA/hAT-Charlie	2	174	(4)	3036932
2944	25.6	8.4	2.4	chr4	183348376	183348835	(6865720)	+	Arthur1	DNA/hAT-Tip100	1	507	(3440)	3044782
4144	13.2	2.0	0.0	chr4	183348836	183349456	(6865099)	+	MER41B	LTR/ERV1	1	634	(0)	3044783
23124	11.8	1.4	0.0	chr4	190108264	190111540	(103015)	C	HERVK-int	LTR/ERVK	(1208)	6328	3007	3054628
261	23.3	0.0	0.0	chr4	190111624	190111683	(102872)	C	HERVK-int	LTR/ERVK	(6716)	718	659	3054629
1729	17.1	1.4	0.3	chr4	190111667	190111959	(102596)	C	HERVK-int	LTR/ERVK	(6840)	696	401	3054629
1218	8.2	0.0	0.0	chr4	190111960	190112106	(102449)	+	AluYh3	SINE/Alu	136	282	(29)	3054630
421	15.2	0.0	0.0	chr5	5523237	5523302	(176014957)	+	MER41C	LTR/ERV1	1	66	(455)	3060644
326	9.5	0.0	0.0	chr5	5523299	5523340	(176014919)	+	MER41C	LTR/ERV1	25	66	(455)	3060644
329	7.0	2.3	0.0	chr5	5523335	5523377	(176014882)	+	MER41C	LTR/ERV1	23	66	(455)	3060644
3087	15.2	1.6	0.2	chr5	5585866	5586354	(175951905)	C	MER66C	LTR/ERV1	(59)	496	1	3060714
21	16.7	2.1	0.0	chr5	10354121	10354167	(171184092)	+	G-rich	Low_complexity	1	48	(0)	3066756
36	0.0	0.0	0.0	chr5	10761386	10761418	(170776841)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	3067423
13	18.9	3.5	6.8	chr5	10761419	10761475	(170776784)	+	GA-rich	Low_complexity	1	59	(0)	3067424
26	3.1	3.0	0.0	chr5	37668061	37668093	(143870166)	+	(AAAAC)n	Simple_repeat	1	34	(0)	3104890
245	22.9	1.6	0.0	chr5	40803198	40803258	(140735001)	C	L3	LINE/CR1	(561)	3538	3477	3109436
1171	19.7	0.0	3.1	chr5	40803399	40803626	(140734633)	+	AluJr	SINE/Alu	84	304	(8)	3109443
4001	14.3	1.8	2.0	chr5	41882812	41883502	(139654757)	C	MER50	LTR/ERV1	(39)	695	7	3110958
1547	7.8	3.6	0.0	chr5	41883503	41883719	(139654540)	+	L1PA13	LINE/L1	5938	6162	(1)	3110959
1762	15.2	1.8	0.4	chr5	41883725	41883993	(139654266)	+	AluSz6	SINE/Alu	16	288	(24)	3110960
17642	10.2	3.5	1.2	chr5	43072721	43075264	(138462995)	C	HERVH48-int	LTR/ERV1	(4050)	2604	1	3112489
2999	10.3	0.2	0.7	chr5	43075265	43075673	(138462586)	C	MER48	LTR/ERV1	(0)	407	1	3112489
21	24.3	0.0	0.0	chr5	43075973	43076026	(138462233)	+	GA-rich	Low_complexity	1	54	(0)	3112490
4433	7.1	1.4	2.9	chr5	74591530	74591966	(106946293)	C	MER41A	LTR/ERV1	(109)	445	1	3152193
423	26.2	3.1	1.6	chr5	74592001	74592128	(106946131)	+	Charlie2a	DNA/hAT-Charlie	6	135	(2726)	3152195
247	27.8	6.6	6.2	chr5	82274935	82275133	(99263126)	C	L2b	LINE/L2	(366)	3053	2853	3164380
246	26.1	2.8	0.0	chr5	82277240	82277308	(99260951)	C	MADE2	DNA/TcMar-Mariner	(7)	73	3	3164383
4022	11.7	5.4	0.2	chr5	91291596	91292193	(90246066)	C	MER41B	LTR/ERV1	(0)	634	4	3175966
488	30.1	28.9	4.4	chr5	91292194	91292535	(90245724)	C	MamGypLTR2c	LTR/Gypsy	(575)	493	61	3175965
22	2.8	2.4	7.0	chr5	91380210	91380251	(90158008)	+	(CCG)n	Simple_repeat	1	43	(0)	3176168
442	22.2	20.7	0.0	chr5	95553984	95554137	(85984122)	+	MIRb	SINE/MIR	57	254	(14)	3181310
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
3909	9.7	1.4	0.0	chr5	96808822	96809367	(84728892)	C	MER41A	LTR/ERV1	(0)	554	1	3183135
3483	10.3	11.4	2.2	chr5	97040896	97041539	(84496720)	+	Tigger3b	DNA/TcMar-Tigger	481	1191	(40)	3183501
817	17.8	4.5	1.7	chr5	103057143	103057314	(78480945)	C	MER57A-int	LTR/ERV1	(5174)	1013	837	3190904
2326	11.9	0.1	2.6	chr5	103057315	103057717	(78480542)	+	MER41A	LTR/ERV1	1	436	(198)	3190911
211	35.2	4.4	7.5	chr5	103114597	103114808	(78423451)	+	L2c	LINE/L2	3106	3310	(77)	3190997
374	27.6	10.1	3.3	chr5	103115095	103115214	(78423045)	C	L2a	LINE/L2	(0)	3426	3298	3190998
1042	25.0	4.2	3.2	chr5	108531424	108532124	(73006135)	+	MER61E	LTR/ERV1	1	728	(0)	3197775
3147	11.1	2.4	3.5	chr5	109424300	109424550	(72113709)	+	MER84	LTR/ERV1	146	401	(106)	3198972
4798	11.8	0.0	1.7	chr5	109424551	109425251	(72113008)	+	LTR8	LTR/ERV1	1	689	(2)	3198974
2345	8.6	1.0	0.0	chr5	113032129	113032430	(68505829)	+	AluSp	SINE/Alu	1	305	(8)	3203734
646	13.7	8.1	14.6	chr5	113032431	113032595	(68505664)	+	MER33	DNA/hAT-Charlie	161	324	(0)	3203733
4199	7.7	2.0	0.2	chr5	113032618	113033161	(68505098)	+	MER41A	LTR/ERV1	1	554	(0)	3203735
230	30.0	8.4	6.2	chr5	113033289	113033416	(68504843)	+	Charlie4z	DNA/hAT-Charlie	2	132	(35)	3203737
884	32.9	13.5	2.0	chr5	119322627	119323323	(62214936)	+	L2b	LINE/L2	2137	2926	(493)	3212169
7310	3.9	0.3	0.1	chr5	131734409	131735455	(49802804)	+	L1PA5	LINE/L1	5090	6138	(16)	3228433
100	24.9	0.9	0.0	chr5	131735458	131735686	(49802573)	+	(TA)n	Simple_repeat	1	231	(0)	3228434
282	27.2	4.7	0.0	chr5	131735714	131735794	(49802465)	+	MIRb	SINE/MIR	88	172	(96)	3228435
3418	15.3	2.9	0.7	chr5	132666872	132667416	(48870843)	+	MER41D	LTR/ERV1	1	557	(0)	3229728
2353	8.1	2.6	0.7	chr5	140638550	140638856	(40899403)	C	AluSq2	SINE/Alu	(0)	313	1	3242979
1467	7.3	3.0	0.0	chr5	140638858	140639049	(40899210)	+	MER4B	LTR/ERV1	569	766	(0)	3242976
205	21.4	9.2	4.4	chr5	140700148	140700229	(40838030)	+	MIR3	SINE/MIR	112	192	(38)	3243090
196	22.9	2.0	0.0	chr5	140700414	140700461	(40837798)	C	MamRTE1	LINE/RTE-BovB	(3740)	72	24	3243091
186	36.2	14.8	5.6	chr5	148801694	148801889	(32736370)	+	L2c	LINE/L2	2651	2867	(552)	3256463
505	21.8	2.7	0.0	chr5	148801893	148802002	(32736257)	+	L1ME1	LINE/L1	6067	6179	(0)	3256464
717	28.7	5.3	1.0	chr5	148802086	148802282	(32735977)	+	MIR	SINE/MIR	46	251	(11)	3256465
1120	27.4	12.3	0.9	chr5	150762652	150763205	(30775054)	C	L2a	LINE/L2	(204)	3222	2606	3260642
183	35.4	5.9	3.0	chr5	150763299	150763397	(30774862)	+	MamTip2	DNA/hAT-Tip100	119	220	(85)	3260643
693	11.2	0.0	0.0	chr5	157278760	157278857	(24259402)	+	MER57A-int	LTR/ERV1	5798	5895	(292)	3272425
974	16.5	9.2	1.2	chr5	157278864	157279121	(24259138)	+	LTR54B	LTR/ERV1	216	496	(2)	3272426
4131	24.2	5.5	2.9	chr5	159635789	159638456	(21899803)	+	L1M4b	LINE/L1	1882	4635	(2371)	3276472
910	32.1	8.2	7.1	chr5	159638972	159639353	(21898906)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	232	3276474
424	28.0	4.5	8.2	chr5	160009551	160009733	(21528526)	+	MER5B	DNA/hAT-Charlie	1	176	(2)	3277190
1226	29.4	1.5	0.0	chr5	173648342	173648674	(7889585)	+	MLT1I	LTR/ERVL-MaLR	60	397	(14)	3299984
288	28.8	9.9	0.8	chr5	173855457	173855575	(7682684)	+	MLT1L	LTR/ERVL-MaLR	158	288	(322)	3300445
373	25.2	11.2	8.8	chr5	173855636	173855831	(7682428)	+	MLT1L	LTR/ERVL-MaLR	301	600	(10)	3300445
250	25.7	6.3	0.0	chr5	177379505	177379578	(4158681)	+	L2a	LINE/L2	3346	3424	(2)	3307294
120	11.6	3.5	3.7	chr5	177379713	177379859	(4158400)	+	(TCTT)n	Simple_repeat	1	149	(0)	3307295
2326	9.2	0.3	0.0	chr5	179838394	179838686	(1699573)	+	AluSx	SINE/Alu	1	294	(18)	3311661
1605	16.2	7.5	0.4	chr5	179838698	179838968	(1699291)	+	AluJb	SINE/Alu	1	292	(20)	3311662
5462	24.1	11.3	5.8	chr6	2933815	2935188	(167870791)	+	BLACKJACK	DNA/hAT-Blackjack	991	2473	(496)	3318123
740	25.5	1.2	0.0	chr6	2935193	2935349	(167870630)	C	MER45A	DNA/hAT-Tip100	(0)	178	20	3318126
314	34.1	0.0	7.9	chr6	2990481	2990620	(167815359)	+	L2b	LINE/L2	3244	3372	(3)	3318213
3903	10.6	2.7	0.5	chr6	2990658	2991209	(167814770)	+	LTR6A	LTR/ERV1	1	564	(0)	3318214
2362	6.6	1.7	0.0	chr6	3024407	3024693	(167781286)	C	AluSp	SINE/Alu	(21)	292	1	3318279
4477	7.6	0.0	0.0	chr6	3339426	3339979	(167466000)	+	MER41A	LTR/ERV1	1	554	(0)	3318757
1816	18.8	11.8	1.3	chr6	6593037	6593483	(164212496)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	6	3323618
214	22.7	4.3	5.4	chr6	6593489	6593581	(164212398)	+	MIRb	SINE/MIR	147	238	(30)	3323619
446	30.4	17.1	5.3	chr6	6593616	6594090	(164211889)	C	L4_B_Mam	LINE/RTE-X	(177)	4813	4221	3323620
393	32.2	6.6	3.4	chr6	10662183	10662301	(160143678)	+	L2	LINE/L2	2497	2622	(797)	3329952
3572	13.7	4.6	4.4	chr6	10662302	10662484	(160143495)	+	MER41B	LTR/ERV1	1	175	(459)	3329953
2242	14.8	3.1	6.1	chr6	11391053	11391513	(159414466)	+	L1MA7	LINE/L1	5606	6052	(239)	3331153
643	16.9	1.5	0.0	chr6	11391514	11391643	(159414336)	+	L1MA7	LINE/L1	6159	6290	(1)	3331153
671	18.9	8.7	4.0	chr6	14735266	14735441	(156070538)	C	LTR79	LTR/ERVL	(0)	527	343	3336468
399	29.0	11.2	1.8	chr6	14735485	14735709	(156070270)	C	LTR79	LTR/ERVL	(270)	257	9	3336468
239	31.4	12.3	3.3	chr6	15257456	15257728	(155548251)	C	L1M5	LINE/L1	(290)	5834	5534	3337677
303	25.3	4.4	0.0	chr6	15257850	15257936	(155548043)	+	MIRc	SINE/MIR	173	263	(5)	3337678
4059	11.9	3.6	2.2	chr6	15555300	15555924	(155250055)	+	MER41B	LTR/ERV1	1	634	(0)	3338068
2995	16.0	12.0	6.9	chr6	15555925	15556183	(155249796)	+	MER41-int	LTR/ERV1	1	301	(5645)	3338068
262	30.5	16.9	4.1	chr6	15627969	15628214	(155177765)	+	L3b	LINE/CR1	4904	5187	(45)	3338173
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
3945	13.5	3.6	6.5	chr6	15904250	15904961	(154901018)	C	LTR8	LTR/ERV1	(0)	691	1	3338657
232	33.8	9.1	9.3	chr6	15908720	15909029	(154896950)	C	L2b	LINE/L2	(0)	3375	3067	3338662
32	3.2	0.0	0.0	chr6	15909049	15909080	(154896899)	+	(TG)n	Simple_repeat	1	32	(0)	3338663
2444	19.0	3.0	4.1	chr6	16031415	16031909	(154774070)	+	MER61E	LTR/ERV1	85	531	(38)	3338877
3395	16.5	1.3	0.0	chr6	16109152	16109697	(154696282)	+	MER68	LTR/ERVL	11	563	(0)	3339010
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
2133	13.9	0.7	0.0	chr6	16214180	16214489	(154591490)	C	AluSx1	SINE/Alu	(0)	312	1	3339168
1060	16.1	0.5	11.1	chr6	16214490	16214666	(154591313)	C	LTR8	LTR/ERV1	(522)	169	1	3339167
452	27.8	12.2	2.4	chr6	16214672	16214832	(154591147)	+	Charlie2b	DNA/hAT-Charlie	2457	2647	(135)	3339169
2815	20.6	1.9	9.6	chr6	16235561	16236310	(154569669)	C	LTR8	LTR/ERV1	(0)	691	1	3339205
14	5.0	0.0	0.0	chr6	16760461	16760481	(154045498)	+	(GGC)n	Simple_repeat	1	21	(0)	3340014
198	40.9	8.0	0.0	chr6	16851945	16852071	(153953908)	+	L3	LINE/CR1	2601	2738	(1361)	3340163
311	29.2	2.8	3.6	chr6	17633434	17633543	(153172436)	C	L2c	LINE/L2	(7)	3380	3272	3341495
225	22.1	30.1	3.7	chr6	17700285	17700448	(153105531)	C	MIR	SINE/MIR	(31)	231	6	3341624
566	18.7	17.0	3.9	chr6	17700718	17700895	(153105084)	+	MER58C	DNA/hAT-Charlie	10	215	(0)	3341625
518	28.9	3.0	1.9	chr6	17707390	17707551	(153098428)	+	MIRb	SINE/MIR	49	212	(56)	3341635
280	33.3	3.6	0.7	chr6	17707749	17707884	(153098095)	C	MIR3	SINE/MIR	(28)	180	41	3341636
4361	10.9	1.6	0.5	chr6	24756192	24756815	(146049164)	C	MER41B	LTR/ERV1	(0)	634	4	3352489
242	36.2	5.0	9.2	chr6	24756816	24756900	(146049079)	C	L3	LINE/CR1	(1506)	2593	2522	3352486
26	0.0	0.0	0.0	chr6	24756901	24756925	(146049054)	+	(T)n	Simple_repeat	1	25	(0)	3352490
2164	10.5	0.0	0.0	chr6	24756935	24757211	(146048768)	C	AluSx1	SINE/Alu	(35)	277	1	3352491
2016	21.6	6.8	3.5	chr6	26027599	26028082	(144777897)	+	MER34	LTR/ERV1	42	542	(0)	3354513
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
527	17.5	3.0	0.0	chr6	26171594	26171690	(144634289)	C	MER5A	DNA/hAT-Charlie	(82)	107	8	3354759
2891	16.3	6.3	1.3	chr6	26202952	26203491	(144602488)	C	MER39B	LTR/ERV1	(84)	569	1	3354818
730	22.1	9.5	6.8	chr6	26205551	26205846	(144600133)	+	LOR1b	LTR/ERV1	3	307	(154)	3354820
2234	11.6	0.0	0.7	chr6	26217845	26218147	(144587832)	+	AluSg	SINE/Alu	1	301	(9)	3354843
1056	24.6	8.1	9.4	chr6	26276488	26276946	(144529033)	+	MER39	LTR/ERV1	1	609	(98)	3354940
682	0.0	0.0	0.0	chr6	26299677	26299749	(144506230)	+	tRNA-Arg-CGA	tRNA	1	73	(3)	3354966
1340	21.5	6.5	4.5	chr6	26303489	26303809	(144502170)	+	MER90a	LTR/ERV1	1	332	(282)	3354974
1693	12.9	4.0	8.5	chr6	26303810	26304127	(144501852)	C	AluSx	SINE/Alu	(9)	303	1	3354975
752	1.2	0.0	0.0	chr6	26327589	26327673	(144478306)	+	tRNA-Ser-TCY	tRNA	1	85	(0)	3355033
2383	10.9	7.2	8.6	chr6	26593423	26593742	(144212237)	+	MER65A	LTR/ERV1	1	312	(133)	3355539
6250	11.8	1.9	1.0	chr6	26744675	26745634	(144060345)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3355771
4115	12.1	6.3	0.3	chr6	27135841	27136436	(143669543)	C	MER41B	LTR/ERV1	(0)	634	1	3356348
229	32.4	8.5	0.0	chr6	27136437	27136507	(143669472)	C	L2	LINE/L2	(800)	2619	2543	3356347
384	22.6	6.2	0.9	chr6	27141901	27142007	(143663972)	+	Charlie5	DNA/hAT-Charlie	14	126	(2498)	3356357
1039	23.2	8.7	5.1	chr6	27296715	27297146	(143508833)	+	Charlie2b	DNA/hAT-Charlie	819	1267	(1515)	3356670
924	22.4	7.5	4.3	chr6	27297146	27297518	(143508461)	+	Charlie2b	DNA/hAT-Charlie	2079	2464	(318)	3356671
20	20.6	0.0	0.0	chr6	27605289	27605327	(143200652)	+	(T)n	Simple_repeat	1	39	(0)	3357207
627	5.4	0.0	0.0	chr6	27795859	27795932	(143010047)	C	tRNA-Gln-CAA	tRNA	(1)	74	1	3357606
486	28.7	6.5	0.6	chr6	27796019	27796176	(143009803)	+	MER20B	DNA/hAT-Charlie	5	172	(611)	3357607
533	28.8	2.1	2.0	chr6	27805189	27805389	(143000590)	C	L1ME4b	LINE/L1	(2)	890	709	3357628
258	29.2	0.0	4.0	chr6	27805402	27805476	(143000503)	C	L1MC	LINE/L1	(1981)	5901	5830	3357629
695	28.6	1.2	7.7	chr6	27805481	27805564	(143000415)	+	MIR	SINE/MIR	4	84	(178)	3357630
2104	15.9	10.6	1.5	chr6	27805565	27805965	(143000014)	C	MER65A	LTR/ERV1	(3)	442	1	3357631
1747	11.2	0.0	0.4	chr6	27812495	27812736	(142993243)	+	AluSx3	SINE/Alu	68	308	(3)	3357637
2135	13.2	1.0	0.0	chr6	27812871	27813174	(142992805)	+	AluJr	SINE/Alu	1	307	(5)	3357638
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
1243	15.4	9.0	6.5	chr6	27892351	27892485	(142913494)	C	AluJr4	SINE/Alu	(178)	134	1	3357783
322	11.1	0.0	0.0	chr6	28000466	28000510	(142805469)	C	MER41G	LTR/ERV1	(0)	885	841	3357942
2309	14.9	16.0	3.7	chr6	28000512	28001046	(142804933)	+	LTR18B	LTR/ERVL	2	614	(0)	3357943
2231	10.9	0.3	0.0	chr6	28211219	28211511	(142594468)	+	AluSz6	SINE/Alu	1	294	(18)	3358256
355	31.6	2.3	9.0	chr6	28211512	28211644	(142594335)	C	L1MC5	LINE/L1	(2083)	7221	7092	3358255
455	22.0	4.4	0.0	chr6	28215637	28215745	(142590234)	C	LTR65	LTR/ERV1	(506)	163	50	3358263
17	4.3	0.0	0.0	chr6	28215775	28215798	(142590181)	+	(GTTT)n	Simple_repeat	1	24	(0)	3358264
410	28.1	0.8	1.5	chr6	28225034	28225163	(142580816)	+	Charlie13a	DNA/hAT-Charlie	1376	1504	(10)	3358288
13	9.7	9.1	0.0	chr6	28336875	28336907	(142469072)	+	(GTTGTT)n	Simple_repeat	1	36	(0)	3358464
2522	11.9	20.7	8.3	chr6	28353865	28354395	(142451584)	C	LTR18B	LTR/ERVL	(0)	614	1	3358498
1247	25.5	13.6	2.0	chr6	28565513	28566139	(142239840)	C	L1ME1	LINE/L1	(853)	5389	4682	3358837
27	0.0	6.1	0.0	chr6	28720586	28720618	(142085361)	+	(GTTTT)n	Simple_repeat	1	35	(0)	3359089
2325	8.6	0.0	0.4	chr6	28720619	28720896	(142085083)	C	AluSc8	SINE/Alu	(33)	278	2	3359090
2244	10.2	0.0	0.0	chr6	28754378	28754670	(142051309)	C	AluSx4	SINE/Alu	(15)	295	3	3359161
1946	13.6	3.3	3.7	chr6	28754671	28754971	(142051008)	C	THE1D	LTR/ERVL-MaLR	(47)	334	19	3359160
302	32.6	0.7	2.2	chr6	30326147	30326284	(140479695)	C	L2b	LINE/L2	(2)	3373	3238	3361433
203	37.3	8.3	6.2	chr6	30496248	30496311	(140309668)	C	L2a	LINE/L2	(218)	3169	3101	3361683
285	23.2	9.2	5.7	chr6	30496327	30496431	(140309548)	C	LTR67B	LTR/ERVL	(64)	556	448	3361685
637	33.1	6.4	2.0	chr6	30737591	30737932	(140068047)	+	L2a	LINE/L2	3065	3422	(4)	3362115
205	36.8	2.1	0.0	chr6	30737996	30738090	(140067889)	C	MIR3	SINE/MIR	(41)	167	71	3362119
2265	7.3	0.7	0.3	chr6	31400352	31400638	(139405341)	+	AluSp	SINE/Alu	1	288	(25)	3363278
12	4.7	4.5	0.0	chr6	31690605	31690626	(139115353)	+	(AGGA)n	Simple_repeat	1	23	(0)	3363721
260	35.8	14.3	0.5	chr6	31725783	31726203	(139079776)	+	L2c	LINE/L2	2327	2815	(604)	3363787
249	28.8	5.5	13.6	chr6	31726300	31726520	(139079459)	+	L2c	LINE/L2	2961	3165	(222)	3363787
268	28.6	7.7	0.0	chr6	31777954	31778037	(139027942)	+	MIRc	SINE/MIR	114	204	(64)	3363874
1807	17.6	8.4	2.7	chr6	31813608	31813713	(138992266)	C	L1MB2	LINE/L1	(391)	5780	5661	3363943
2275	7.5	2.3	0.3	chr6	31835547	31835841	(138970138)	C	AluSc8	SINE/Alu	(10)	301	1	3363982
1634	10.3	4.4	0.8	chr6	31835962	31836203	(138969776)	C	AluSc	SINE/Alu	(3)	306	56	3363984
1230	20.1	13.0	1.1	chr6	31836273	31836535	(138969444)	C	AluJb	SINE/Alu	(11)	301	3	3363985
3865	12.1	1.3	0.0	chr6	33377334	33377880	(137428099)	C	MER41A	LTR/ERV1	(0)	554	1	3366333
1452	5.1	22.2	1.9	chr6	33377927	33378140	(137427839)	+	AluYc	SINE/Alu	1	270	(29)	3366334
1948	14.1	3.3	0.0	chr6	33768885	33769174	(137036805)	+	AluJb	SINE/Alu	1	300	(12)	3367112
863	16.5	0.0	0.0	chr6	34664348	34664468	(136141511)	C	FLAM_A	SINE/Alu	(20)	122	2	3368858
389	32.2	2.0	3.2	chr6	37049256	37049409	(133756570)	+	MIRb	SINE/MIR	116	267	(1)	3373815
410	14.6	19.6	0.0	chr6	37175710	37175791	(133630188)	C	MER3	DNA/hAT-Charlie	(107)	102	1	3374141
1846	10.4	3.5	5.7	chr6	37175979	37176275	(133629704)	C	AluSx1	SINE/Alu	(21)	291	2	3374142
2130	10.5	1.7	0.3	chr6	37176280	37176574	(133629405)	C	AluSz	SINE/Alu	(13)	299	1	3374143
1053	13.6	0.0	1.9	chr6	37176667	37176821	(133629158)	+	AluJr4	SINE/Alu	115	266	(46)	3374144
378	26.9	1.4	9.6	chr6	37182951	37183106	(133622873)	C	MIR	SINE/MIR	(109)	159	17	3374165
18	30.4	1.7	5.1	chr6	38639870	38639984	(132165995)	+	(CGCCGC)n	Simple_repeat	1	117	(0)	3376682
214	26.5	14.4	0.0	chr6	39226034	39226116	(131579863)	C	MIRb	SINE/MIR	(117)	151	55	3377682
197	22.7	6.4	0.0	chr6	39226148	39226191	(131579788)	+	L2b	LINE/L2	3313	3359	(16)	3377683
15	12.7	0.0	5.3	chr6	41073547	41073584	(129732395)	+	(CTCCCCG)n	Simple_repeat	1	38	(0)	3380582
978	18.8	6.5	0.5	chr6	41934088	41934290	(128871689)	+	MER58B	DNA/hAT-Charlie	45	260	(81)	3382122
979	18.9	6.4	5.3	chr6	41934292	41934537	(128871442)	+	Tigger9b	DNA/TcMar-Tigger	6	254	(370)	3382123
1287	13.0	11.8	1.6	chr6	41934533	41934790	(128871189)	+	Tigger9b	DNA/TcMar-Tigger	336	623	(1)	3382124
17	8.6	8.1	0.0	chr6	41941725	41941761	(128864218)	+	(GGCGCT)n	Simple_repeat	1	40	(0)	3382130
15	10.4	3.0	2.9	chr6	41941767	41941799	(128864180)	+	(CCCG)n	Simple_repeat	1	34	(0)	3382131
352	18.5	0.0	0.0	chr6	42563659	42563723	(128242256)	C	L2a	LINE/L2	(24)	3402	3338	3383531
2385	9.4	0.3	0.0	chr6	42565552	42565859	(128240120)	C	AluSp	SINE/Alu	(4)	309	1	3383532
14	14.9	5.4	0.0	chr6	42783122	42783158	(128022821)	+	(CGCTCC)n	Simple_repeat	1	39	(0)	3384026
2595	17.2	8.9	6.0	chr6	43093678	43094304	(127711675)	C	MER51A	LTR/ERV1	(0)	640	1	3384674
8588	15.2	1.2	0.5	chr6	43391529	43393150	(127412829)	+	HERVP71A-int	LTR/ERV1	18	1762	(5828)	3385256
502	29.0	8.0	5.2	chr6	43635317	43635607	(127170372)	+	L2b	LINE/L2	3076	3375	(0)	3385717
384	26.0	3.0	3.0	chr6	43927447	43927581	(126878398)	+	MIR1_Amn	SINE/MIR	2	136	(94)	3386263
344	34.5	11.4	0.7	chr6	43928433	43928828	(126877151)	+	L2c	LINE/L2	2667	3114	(273)	3386266
755	22.3	12.8	0.5	chr6	43970101	43970285	(126835694)	C	MIR	SINE/MIR	(29)	233	23	3386345
573	23.6	9.7	4.6	chr6	44063575	44063769	(126742210)	C	MIR	SINE/MIR	(44)	218	13	3386499
630	28.5	10.6	1.5	chr6	46440642	46440976	(124365003)	C	L4_B_Mam	LINE/RTE-X	(154)	4787	4419	3390202
2339	21.3	5.7	0.2	chr6	49645609	49646126	(121159853)	C	L1MD3	LINE/L1	(0)	7995	7448	3394722
1189	31.5	7.4	1.3	chr6	50962297	50963046	(119842933)	C	L2a	LINE/L2	(8)	3418	2610	3396392
17	13.2	6.0	7.0	chr6	52362168	52362234	(118443745)	+	(GCTCGG)n	Simple_repeat	1	71	(0)	3398425
343	16.0	5.1	0.0	chr6	53062175	53062249	(117743730)	+	L1MB4	LINE/L1	6078	6156	(24)	3399479
1241	24.0	4.4	5.1	chr6	67879083	67879506	(102926473)	+	MER39	LTR/ERV1	1	603	(104)	3416014
7791	1.8	0.0	0.0	chr6	67879824	67880939	(102925040)	+	L1PA2	LINE/L1	5032	6147	(8)	3416015
13473	28.8	5.7	5.1	chr6	67881437	67888662	(102917317)	C	HERVH-int	LTR/ERV1	(0)	7713	596	3416017
833	22.5	5.6	4.4	chr6	68741156	68741363	(102064616)	C	MIR	SINE/MIR	(21)	241	38	3417066
1794	15.5	0.3	4.6	chr6	68741364	68741686	(102064293)	C	AluJb	SINE/Alu	(3)	309	1	3417067
386	32.8	14.7	1.7	chr6	72560380	72560556	(98245423)	C	MIRb	SINE/MIR	(39)	229	26	3422029
397	28.8	4.3	1.8	chr6	72560569	72560681	(98245298)	C	MER5B	DNA/hAT-Charlie	(0)	178	63	3422030
187	30.0	0.0	2.0	chr6	72560727	72560777	(98245202)	+	MER5B	DNA/hAT-Charlie	129	178	(0)	3422031
194	27.8	0.0	1.8	chr6	73564480	73564534	(97241445)	C	MIRb	SINE/MIR	(0)	268	215	3423771
180	34.1	8.3	2.2	chr6	73564497	73564586	(97241393)	C	L2c	LINE/L2	(20)	3367	3272	3423772
3782	9.9	10.4	2.2	chr6	73564658	73565059	(97240920)	+	MER41B	LTR/ERV1	1	456	(178)	3423773
8657	16.5	5.7	4.2	chr6	83971957	83974320	(86831659)	C	MER4-int	LTR/ERV1	(1448)	5150	1616	3437225
1716	25.0	10.1	8.6	chr6	83974325	83975082	(86830897)	C	LTR19C	LTR/ERV1	(2)	777	7	3437229
1986	13.9	9.1	8.2	chr6	90350654	90351077	(80454902)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3446259
275	26.3	8.5	0.5	chr6	90610844	90611056	(80194923)	C	MIR	SINE/MIR	(37)	231	5	3446640
196	25.8	11.4	0.0	chr6	107459778	107459839	(63346140)	+	L2b	LINE/L2	3279	3348	(27)	3468895
1969	12.4	6.5	0.0	chr6	109303397	109303686	(61502293)	C	AluSz	SINE/Alu	(2)	310	1	3471959
5127	12.4	4.8	7.8	chr6	110198477	110198634	(60607345)	C	L1MA8	LINE/L1	(912)	5379	5212	3473280
357	39.9	8.1	2.5	chr6	110819381	110819655	(59986324)	C	L2	LINE/L2	(723)	2696	2409	3474371
3230	16.0	3.5	2.6	chr6	110819659	110820224	(59985755)	+	MER41B	LTR/ERV1	1	571	(63)	3474373
1659	9.4	0.0	0.0	chr6	110953610	110953822	(59852157)	+	MER41-int	LTR/ERV1	5730	5942	(4)	3474704
4065	9.5	0.0	2.3	chr6	110953825	110954349	(59851630)	+	MER41B	LTR/ERV1	1	521	(113)	3474704
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
335	28.2	13.2	3.7	chr6	125014274	125014409	(45791570)	C	MIR	SINE/MIR	(3)	259	109	3493719
425	34.2	6.5	1.9	chr6	125014441	125014765	(45791214)	+	L4_C_Mam	LINE/RTE-X	3678	4018	(1120)	3493720
271	38.8	6.2	0.5	chr6	125598472	125598668	(45207311)	C	L2c	LINE/L2	(556)	2863	2655	3494561
255	32.8	4.5	3.8	chr6	125598804	125598936	(45207043)	C	MIR3	SINE/MIR	(1)	207	74	3494565
1331	17.7	8.4	3.6	chr6	125598964	125599349	(45206630)	+	MLT1C	LTR/ERVL-MaLR	6	411	(56)	3494566
474	28.2	11.5	9.6	chr6	134022735	134023118	(36782861)	+	MER65D	LTR/ERV1	1	392	(81)	3506034
2042	15.4	0.0	0.0	chr6	134196951	134197235	(36608744)	+	AluJb	SINE/Alu	1	285	(27)	3506367
2453	16.4	4.5	8.9	chr6	134291282	134291778	(36514201)	+	LTR54	LTR/ERV1	5	490	(20)	3506601
331	28.7	1.1	0.0	chr6	135499324	135499410	(35306569)	+	L2a	LINE/L2	3337	3424	(2)	3508541
216	26.8	7.9	0.0	chr6	135499406	135499487	(35306492)	C	MIR	SINE/MIR	(0)	262	174	3508542
348	31.8	8.1	5.1	chr6	135499652	135499895	(35306084)	C	L2b	LINE/L2	(222)	3165	2925	3508543
1231	16.6	8.0	0.4	chr6	137170726	137170967	(33635012)	C	LTR47A	LTR/ERVL	(190)	262	1	3511072
347	33.6	4.4	0.0	chr6	137171147	137171277	(33634702)	C	L2a	LINE/L2	(7)	3419	3283	3511074
398	28.0	14.9	0.9	chr6	137908139	137908473	(32897506)	C	L1ME4a	LINE/L1	(205)	5919	5530	3512172
25	6.3	0.0	0.0	chr6	137908496	137908528	(32897451)	+	(TC)n	Simple_repeat	1	33	(0)	3512173
41	0.0	0.0	0.0	chr6	137908529	137908563	(32897416)	+	(CA)n	Simple_repeat	1	35	(0)	3512174
14	12.2	0.0	0.0	chr6	137908688	137908714	(32897265)	+	(TTTGT)n	Simple_repeat	1	27	(0)	3512175
13	15.5	5.6	0.0	chr6	137908715	137908723	(32897256)	+	(TTTAT)n	Simple_repeat	1	38	(0)	3512176
6333	12.3	4.1	0.6	chr6	137912854	137914538	(32891441)	C	L1PA17	LINE/L1	(1)	6165	4392	3512180
2099	14.8	0.0	0.3	chr6	137915305	137915607	(32890372)	C	AluSz6	SINE/Alu	(10)	302	1	3512182
2803	8.9	0.8	0.3	chr6	137915744	137916116	(32889863)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3512183
3312	11.5	0.2	0.0	chr6	143064809	143065278	(27740701)	C	LTR7C	LTR/ERV1	(0)	471	1	3519342
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
2144	15.3	7.9	1.6	chr6	143726268	143726719	(27079260)	C	L1MB2	LINE/L1	(2)	6169	5687	3520333
2454	22.3	7.4	4.5	chr6	143726720	143726815	(27079164)	C	L1MD2	LINE/L1	(878)	5481	5388	3520330
5901	12.5	1.9	1.5	chr6	143726810	143727861	(27078118)	C	L1MA4A	LINE/L1	(5)	6298	5243	3520334
17	15.8	5.9	1.9	chr6	144064364	144064414	(26741565)	+	(GCCCCCGC)n	Simple_repeat	1	54	(0)	3520784
399	31.5	9.4	5.1	chr6	146884329	146884627	(23921352)	C	LTR85a	LTR/Gypsy?	(88)	696	283	3524633
191	23.6	9.8	1.8	chr6	146884905	146884960	(23921019)	C	MIR3	SINE/MIR	(87)	121	61	3524634
302	32.9	0.4	4.2	chr6	146886813	146886923	(23919056)	C	MIRc	SINE/MIR	(114)	154	41	3524636
4557	10.5	0.9	0.9	chr6	146887061	146887694	(23918285)	C	MER41B	LTR/ERV1	(0)	634	1	3524637
447	23.2	1.0	0.0	chr6	146891913	146892011	(23913968)	+	MER5A	DNA/hAT-Charlie	19	118	(71)	3524640
410	36.8	14.0	3.7	chr6	146894435	146895354	(23910625)	C	L2	LINE/L2	(2117)	1302	273	3524641
2253	11.4	0.3	1.3	chr6	146895488	146895795	(23910184)	+	AluSp	SINE/Alu	1	305	(8)	3524645
424	36.7	5.4	6.6	chr6	146897988	146898533	(23907446)	+	L3	LINE/CR1	3272	3810	(289)	3524648
317	29.8	11.0	0.0	chr6	147161439	147161559	(23644420)	C	L2a	LINE/L2	(0)	3426	3291	3525022
18	24.8	0.0	0.0	chr6	147161687	147161732	(23644247)	+	(TTCC)n	Simple_repeat	1	46	(0)	3525023
1068	19.1	10.0	0.4	chr6	147161748	147162026	(23643953)	+	MER33	DNA/hAT-Charlie	1	309	(15)	3525024
13	32.8	0.0	0.0	chr6	147203730	147203779	(23602200)	+	(GCC)n	Simple_repeat	1	50	(0)	3525091
221	29.3	9.7	2.9	chr6	147209769	147209940	(23596039)	C	L2b	LINE/L2	(270)	3117	2933	3525096
381	31.0	0.0	0.0	chr6	147212443	147212557	(23593422)	+	MIR3	SINE/MIR	76	185	(23)	3525102
4084	25.4	9.0	1.4	chr6	147367658	147370238	(23435741)	+	L1ME1	LINE/L1	3260	6166	(186)	3525308
4112	9.0	0.6	0.0	chr6	147449273	147449816	(23356163)	C	MER41A	LTR/ERV1	(7)	547	1	3525419
1299	25.2	10.4	4.6	chr6	147449953	147450684	(23355295)	+	HAL1b	LINE/L1	873	1651	(770)	3525416
441	19.7	0.0	0.0	chr6	149406511	149406581	(21399398)	+	MER58A	DNA/hAT-Charlie	2	72	(152)	3528383
2014	9.6	2.0	8.1	chr6	149546489	149546811	(21259168)	C	AluJb	SINE/Alu	(9)	303	1	3528649
2125	9.4	1.0	6.4	chr6	156719245	156719574	(14086405)	C	AluSx1	SINE/Alu	(0)	312	1	3539890
4506	6.2	0.5	0.2	chr6	157754759	157755310	(13050669)	C	MER41A	LTR/ERV1	(0)	554	1	3541411
2730	27.4	14.3	3.8	chr6	157829921	157830586	(12975393)	C	L1MEd	LINE/L1	(5115)	1988	1240	3541548
787	19.4	13.9	0.0	chr6	157830587	157830766	(12975213)	+	MER3	DNA/hAT-Charlie	1	209	(0)	3541549
2730	27.4	14.3	3.8	chr6	157830767	157831845	(12974134)	C	L1MEd	LINE/L1	(5864)	1239	29	3541548
565	21.6	5.6	0.7	chr6	158004004	158004138	(12801841)	+	LTR87	LTR/ERVL?	480	621	(3)	3541802
4781	9.6	1.6	0.2	chr6	158004149	158004773	(12801206)	+	MER41B	LTR/ERV1	1	634	(0)	3541803
1204	24.7	4.9	3.5	chr6	159966826	159967224	(10838755)	+	LTR37A	LTR/ERV1	22	426	(0)	3544911
609	31.0	3.0	0.8	chr6	159967226	159967485	(10838494)	C	L1MC4	LINE/L1	(605)	7437	7172	3544907
4256	11.2	2.5	0.3	chr6	164337813	164338432	(6467547)	+	MER41B	LTR/ERV1	1	634	(0)	3550658
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
27	0.0	0.0	0.0	chr6	169702221	169702246	(1103733)	+	(CCCTGC)n	Simple_repeat	1	26	(0)	3556751
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
1951	14.4	0.7	2.0	chr7	2957324	2957628	(156388345)	C	AluJo	SINE/Alu	(11)	301	1	3562358
1011	15.2	3.0	1.2	chr7	5526205	5526368	(153819605)	+	AluJo	SINE/Alu	132	298	(14)	3567254
808	31.9	8.3	0.3	chr7	12718589	12718943	(146627030)	+	L2	LINE/L2	2044	2429	(990)	3577746
536	12.9	5.6	9.0	chr7	14001310	14001420	(145344553)	+	LTR54	LTR/ERV1	77	183	(327)	3579468
797	23.7	1.4	0.9	chr7	14001448	14001664	(145344309)	+	LTR54	LTR/ERV1	293	510	(0)	3579468
819	25.8	15.7	4.9	chr7	16267761	16268066	(143077907)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	3582265
2800	17.8	3.2	12.9	chr7	16419266	16420033	(142925940)	+	LTR8	LTR/ERV1	1	691	(0)	3582433
23894	10.1	2.7	0.7	chr7	22703806	22707656	(136638317)	+	HERVH-int	LTR/ERV1	18	3992	(3721)	3591092
378	29.5	4.3	0.0	chr7	22823056	22823167	(136522806)	+	MIRc	SINE/MIR	19	135	(133)	3591271
323	29.5	0.0	1.3	chr7	24778484	24778562	(134567411)	C	MER81	DNA/hAT-Blackjack	(14)	100	23	3594371
561	36.1	6.3	0.6	chr7	24778581	24778923	(134567050)	C	MLT1J	LTR/ERVL-MaLR	(148)	364	1	3594372
700	27.4	5.8	4.9	chr7	25653831	25654156	(133691817)	C	MER102a	DNA/hAT-Charlie	(1)	329	1	3595747
1009	25.0	12.6	6.7	chr7	25927593	25928068	(133417905)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	1	3596125
369	19.8	18.6	0.9	chr7	26187402	26187507	(133158466)	C	FRAM	SINE/Alu	(47)	129	1	3596577
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
2104	8.3	0.7	4.3	chr7	27663532	27663831	(131682142)	C	AluSz	SINE/Alu	(17)	295	7	3598813
220	28.4	2.9	1.5	chr7	56106796	56106863	(103239110)	+	MIR1_Amn	SINE/MIR	63	131	(99)	3639946
380	30.2	12.0	0.9	chr7	56107124	56107409	(103238564)	C	L2a	LINE/L2	(8)	3367	3029	3639947
185	22.0	3.8	5.7	chr7	65750598	65750650	(93595323)	+	MamRTE1	LINE/RTE-BovB	1637	1688	(2124)	3648385
830	23.2	9.7	8.2	chr7	67019641	67020006	(92325967)	C	LTR56	LTR/ERV1	(9)	436	65	3651349
12	25.5	0.0	0.0	chr7	73308615	73308651	(86037322)	+	(CCACC)n	Simple_repeat	1	37	(0)	3664324
306	24.6	19.8	0.8	chr7	73308961	73309091	(86036882)	C	L1M5	LINE/L1	(601)	5523	5362	3664325
20	23.2	1.6	1.6	chr7	73719518	73719579	(85626394)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3665292
2106	13.7	0.0	1.0	chr7	74272052	74272358	(85073615)	C	AluSx1	SINE/Alu	(7)	305	2	3666642
991	9.7	0.0	6.6	chr7	74650044	74650209	(84695764)	C	MER44A	DNA/TcMar-Tigger	(182)	157	3	3667675
3991	8.2	0.5	0.5	chr7	74650211	74650770	(84695203)	+	Tigger7	DNA/TcMar-Tigger	214	773	(1718)	3667676
2093	9.8	0.3	5.8	chr7	75801499	75801825	(83544148)	+	AluSp	SINE/Alu	1	309	(4)	3670569
4069	12.2	0.2	4.6	chr7	75801862	75802051	(83543922)	+	MER41B	LTR/ERV1	1	186	(448)	3670570
2127	9.6	0.7	2.3	chr7	75802052	75802354	(83543619)	+	AluSx	SINE/Alu	1	298	(14)	3670571
3187	10.3	7.3	4.2	chr7	75843391	75843894	(83502079)	C	MER41C	LTR/ERV1	(0)	521	1	3670696
2584	15.2	3.2	1.4	chr7	75843895	75844028	(83501945)	C	LTR47B	LTR/ERVL	(297)	146	1	3670695
1757	14.3	0.8	1.1	chr7	75938476	75938740	(83407233)	+	AluJo	SINE/Alu	1	264	(48)	3670960
138	31.1	0.0	0.3	chr7	76016110	76016493	(83329480)	+	(AT)n	Simple_repeat	1	384	(0)	3671129
289	4.2	11.1	0.0	chr7	76016507	76016554	(83329419)	+	MLT2A2	LTR/ERVL	508	561	(0)	3671128
4087	15.3	1.3	5.0	chr7	76016556	76017009	(83328964)	+	L1PA17	LINE/L1	5308	5767	(399)	3671130
2356	9.2	0.0	0.0	chr7	76373833	76374124	(82971849)	+	AluSc	SINE/Alu	1	292	(17)	3671986
4079	13.7	0.8	0.2	chr7	84821526	84822155	(74523818)	C	MER41B	LTR/ERV1	(0)	634	1	3684024
2928	17.7	0.2	6.0	chr7	84822156	84822504	(74523469)	+	L1MC3	LINE/L1	7370	7701	(84)	3684022
1264	20.7	13.9	4.4	chr7	88683112	88683389	(70662584)	C	LTR54B	LTR/ERV1	(178)	320	2	3688849
26	22.3	3.5	2.2	chr7	92447832	92447918	(66898055)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	3693909
15	9.6	2.7	5.3	chr7	92448026	92448062	(66897911)	+	(GGCG)n	Simple_repeat	1	38	(0)	3693910
238	29.9	4.1	4.9	chr7	97116977	97117099	(62228874)	+	MER5B	DNA/hAT-Charlie	42	163	(15)	3700297
19	21.9	7.3	4.2	chr7	100436191	100436300	(58909673)	+	G-rich	Low_complexity	1	118	(0)	3706570
26	8.1	0.0	4.7	chr7	101126906	101126948	(58219025)	+	(AC)n	Simple_repeat	1	43	(0)	3708051
295	31.1	13.3	0.9	chr7	103296831	103297054	(56048919)	C	L2	LINE/L2	(1236)	2183	1928	3712505
180	22.5	7.0	0.0	chr7	103297093	103297132	(56048841)	+	L2a	LINE/L2	3268	3310	(77)	3712508
185	13.3	0.0	0.0	chr7	103297219	103297248	(56048725)	+	L2a	LINE/L2	3377	3406	(20)	3712508
250	19.7	6.2	3.2	chr7	104983430	104983492	(54362481)	C	MIRb	SINE/MIR	(10)	252	188	3714957
12	21.6	0.0	8.8	chr7	105013729	105013785	(54332188)	+	G-rich	Low_complexity	1	57	(0)	3715004
241	21.8	0.0	0.0	chr7	106166191	106166245	(53179728)	C	MIR	SINE/MIR	(105)	157	103	3717208
2049	15.2	11.2	0.8	chr7	106183807	106184204	(53161769)	C	MER65A	LTR/ERV1	(0)	445	1	3717247
495	28.8	7.7	4.4	chr7	106199825	106200049	(53145924)	C	MIRb	SINE/MIR	(0)	268	36	3717276
8915	13.1	2.8	1.6	chr7	106203401	106204792	(53141181)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	1310	3717282
7380	21.9	5.0	4.1	chr7	106346363	106347493	(52998480)	+	Charlie6	DNA/hAT-Charlie	871	2005	(1495)	3717452
1412	26.0	7.1	2.5	chr7	106347498	106347978	(52997995)	+	L1MEf	LINE/L1	27	531	(5563)	3717454
1160	26.6	10.3	2.2	chr7	106543381	106543791	(52802182)	C	L2a	LINE/L2	(42)	3384	2937	3717731
339	28.1	9.2	0.0	chr7	106568245	106568372	(52777601)	C	L1PREC2	LINE/L1	(1127)	5019	4879	3717759
358	27.1	0.9	4.5	chr7	106568610	106568721	(52777252)	C	L4_A_Mam	LINE/RTE-X	(241)	4749	4642	3717760
2756	7.5	15.7	0.7	chr7	106569510	106569937	(52776036)	+	LTR10F	LTR/ERV1	1	504	(7)	3717761
560	30.7	8.4	0.5	chr7	106570009	106570227	(52775746)	C	L4_A_Mam	LINE/RTE-X	(468)	4522	4285	3717760
466	29.8	9.5	10.0	chr7	106570262	106570611	(52775362)	C	L4_A_Mam	LINE/RTE-X	(788)	4202	3855	3717760
513	22.9	6.9	7.4	chr7	106571456	106571658	(52774315)	+	MLT1K	LTR/ERVL-MaLR	4	205	(390)	3717762
214	33.0	6.4	5.5	chr7	106658558	106658666	(52687307)	C	MER131	DNA?	(83)	132	23	3717895
3059	23.6	6.1	1.4	chr7	106735380	106736643	(52609330)	C	L1M4c	LINE/L1	(4341)	2043	796	3717977
4320	10.9	4.0	3.0	chr7	106767153	106767852	(52578121)	C	LTR62	LTR/ERVL	(2)	707	1	3718033
296	34.9	11.4	2.7	chr7	106767859	106767985	(52577988)	C	MIRc	SINE/MIR	(20)	248	97	3718034
2254	14.0	6.2	0.3	chr7	106767986	106768364	(52577609)	+	MER57B2	LTR/ERV1	1	403	(0)	3718035
1528	14.5	0.4	0.0	chr7	106774310	106774544	(52571429)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	1	3718048
4321	9.3	1.3	2.8	chr7	106774627	106775270	(52570703)	C	MER41B	LTR/ERV1	(0)	634	1	3718049
4031	9.6	2.5	0.2	chr7	106796527	106796945	(52549028)	C	MER41A	LTR/ERV1	(130)	424	1	3718093
13041	9.0	2.6	0.9	chr7	106796946	106798625	(52547348)	C	MER41-int	LTR/ERV1	(2)	5944	4225	3718093
1474	24.6	10.9	5.8	chr7	106811328	106811720	(52534253)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	92	3718114
37	0.0	0.0	0.0	chr7	106811721	106811754	(52534219)	+	(TTGT)n	Simple_repeat	1	34	(0)	3718115
1474	24.6	10.9	5.8	chr7	106811755	106811844	(52534129)	C	MLT1J	LTR/ERVL-MaLR	(421)	91	1	3718114
260	25.4	2.9	0.0	chr7	106811859	106811925	(52534048)	+	L1M6B	LINE/L1	161	229	(140)	3718116
553	26.0	6.4	10.7	chr7	107034400	107034774	(52311199)	C	HAL1	LINE/L1	(102)	2405	2048	3718493
644	8.8	0.0	0.0	chr7	107034798	107034877	(52311096)	C	AluSz6	SINE/Alu	(1)	311	232	3718494
186	17.1	4.7	2.4	chr7	107048866	107048907	(52297066)	C	MamTip2	DNA/hAT-Tip100	(63)	242	200	3718517
398	26.9	5.5	4.6	chr7	107077239	107077347	(52268626)	C	L2c	LINE/L2	(5)	3382	3273	3718566
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
695	19.9	8.8	2.9	chr7	111533358	111533528	(47812445)	+	MLT1F	LTR/ERVL-MaLR	367	548	(0)	3724457
517	36.0	6.6	3.6	chr7	111533529	111534113	(47811860)	+	L1M5	LINE/L1	4813	5468	(2414)	3724458
637	34.4	8.7	4.5	chr7	111556636	111557764	(47788209)	+	L2c	LINE/L2	2151	3336	(51)	3724503
12	29.0	2.0	0.0	chr7	111562247	111562296	(47783677)	+	(CACGCG)n	Simple_repeat	1	51	(0)	3724507
4239	18.3	6.6	2.1	chr7	115181033	115182655	(44163318)	+	L1MD1	LINE/L1	4540	6235	(7)	3729352
2917	14.8	6.9	9.9	chr7	116951478	116952123	(42393850)	+	MER51A	LTR/ERV1	1	625	(9)	3731849
284	33.3	11.0	0.7	chr7	117014297	117014435	(42331538)	+	LFSINE_Vert	SINE/tRNA	3	157	(302)	3731962
15567	13.1	5.9	1.4	chr7	117047872	117049923	(42296050)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	549	3732010
4941	10.3	3.0	0.3	chr7	117109274	117110012	(42235961)	+	L1PB1	LINE/L1	3200	3959	(2187)	3732106
16	0.0	0.0	0.0	chr7	121007232	121007249	(38338724)	+	(T)n	Simple_repeat	1	18	(0)	3737097
11	6.5	8.3	5.1	chr7	121007266	121007301	(38338672)	+	(TCTTCCT)n	Simple_repeat	1	39	(0)	3737098
227	30.9	4.2	0.0	chr7	121081843	121081910	(38264063)	C	MIRb	SINE/MIR	(15)	253	183	3737207
367	26.2	11.5	9.4	chr7	121111843	121112180	(38233793)	C	MLT1H	LTR/ERVL-MaLR	(4)	485	140	3737241
1111	28.4	6.8	3.5	chr7	121112181	121112657	(38233316)	+	MLT1D	LTR/ERVL-MaLR	1	620	(7)	3737242
274	32.9	12.7	4.6	chr7	123499410	123499618	(35846355)	+	HAL1ME	LINE/L1	1279	1521	(944)	3740505
1865	8.9	0.4	0.0	chr7	123499753	123500000	(35845973)	+	MER41A	LTR/ERV1	1	249	(305)	3740507
324	32.6	8.6	3.7	chr7	123609367	123609554	(35736419)	C	MamTip2	DNA/hAT-Tip100	(107)	198	1	3740677
220	34.9	4.6	1.2	chr7	123623107	123623190	(35722783)	+	L2b	LINE/L2	3245	3331	(44)	3740703
19	10.4	0.0	0.0	chr7	123623223	123623254	(35722719)	+	(AATG)n	Simple_repeat	1	32	(0)	3740704
197	40.7	8.2	3.6	chr7	123623388	123623527	(35722446)	C	MamTip2	DNA/hAT-Tip100	(155)	150	4	3740705
19	12.1	0.0	2.6	chr7	123711269	123711308	(35634665)	+	(AAAAC)n	Simple_repeat	1	38	(0)	3740843
1120	15.9	9.0	2.4	chr7	123729105	123729394	(35616579)	C	MER33	DNA/hAT-Charlie	(13)	311	1	3740879
183	28.9	0.0	7.1	chr7	123749905	123749960	(35596013)	+	MamRTE1	LINE/RTE-BovB	2208	2259	(1553)	3740906
324	14.6	0.0	3.8	chr7	123789710	123789780	(35556193)	C	MLT2D	LTR/ERVL	(0)	567	489	3740972
14	18.7	0.0	0.0	chr7	123789812	123789843	(35556130)	+	(ATGTGT)n	Simple_repeat	1	32	(0)	3740973
20	29.0	0.0	0.0	chr7	123789857	123789919	(35556054)	+	GA-rich	Low_complexity	1	63	(0)	3740974
4081	15.5	0.2	0.9	chr7	123992703	123993160	(35352813)	C	MER41B	LTR/ERV1	(179)	455	1	3741258
12	9.7	0.0	0.0	chr7	124856541	124856562	(34489411)	+	(CATT)n	Simple_repeat	1	22	(0)	3742415
2189	11.5	0.0	1.4	chr7	124941774	124942069	(34403904)	C	AluSx3	SINE/Alu	(13)	298	7	3742520
5057	6.9	2.5	2.0	chr7	124942070	124942322	(34403651)	C	LTR8	LTR/ERV1	(426)	265	5	3742519
9066	13.1	3.9	3.3	chr7	124942323	124943623	(34402350)	+	THE1C-int	LTR/ERVL-MaLR	372	1580	(0)	3742518
550	36.1	5.1	2.5	chr7	125397472	125397832	(33948141)	+	MamGypLTR1b	LTR/Gypsy	408	778	(4)	3743080
292	37.5	4.7	7.1	chr7	125397873	125398222	(33947751)	+	L2a	LINE/L2	3086	3426	(0)	3743081
28	18.1	0.0	3.2	chr7	126700966	126701028	(32644945)	+	(TCCT)n	Simple_repeat	1	63	(0)	3744763
18	18.1	0.0	0.0	chr7	126701031	126701062	(32644911)	+	(AT)n	Simple_repeat	1	32	(0)	3744764
189	33.3	0.0	0.0	chr7	126701063	126701119	(32644854)	C	MIR	SINE/MIR	(4)	258	202	3744765
18	23.0	8.5	3.1	chr7	127392851	127392968	(31953005)	+	(GCCGAGG)n	Simple_repeat	1	128	(0)	3745668
20	25.5	1.1	6.3	chr7	127588308	127588401	(31757572)	+	G-rich	Low_complexity	1	95	(0)	3745955
15	27.6	4.6	0.0	chr7	127588434	127588498	(31757475)	+	(CCCGCG)n	Simple_repeat	1	68	(0)	3745956
11	25.3	0.0	4.3	chr7	127588585	127588630	(31757343)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3745957
616	21.7	9.3	2.4	chr7	128237091	128237260	(31108713)	+	MLT1H2	LTR/ERVL-MaLR	60	242	(247)	3746854
398	16.5	3.2	2.1	chr7	128237307	128237399	(31108574)	+	MLT1H2	LTR/ERVL-MaLR	437	530	(19)	3746854
476	24.7	15.4	2.8	chr7	128237581	128237867	(31108106)	+	L1MC5a	LINE/L1	2436	2765	(12)	3746855
785	28.4	3.5	0.5	chr7	128266582	128266804	(31079169)	+	MIR	SINE/MIR	4	233	(29)	3746916
345	33.0	1.8	0.0	chr7	128266810	128266918	(31079055)	C	L2b	LINE/L2	(19)	3356	3246	3746917
3304	10.0	2.3	1.3	chr7	129067166	129067640	(30278333)	C	LTR15	LTR/ERV1	(13)	480	1	3748406
232	25.4	0.0	4.8	chr7	129287648	129287709	(30058264)	C	MIR3	SINE/MIR	(3)	205	147	3748880
2810	19.4	6.0	8.6	chr7	129287842	129288364	(30057609)	C	L1MC5	LINE/L1	(72)	9232	8677	3748881
5833	14.2	3.0	1.7	chr7	129346315	129347466	(29998507)	+	L1MC1	LINE/L1	5171	6333	(0)	3748986
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
740	15.0	1.6	0.0	chr7	129866620	129866739	(29479234)	+	L1MA4	LINE/L1	6169	6290	(10)	3749990
652	24.2	3.8	3.7	chr7	129866754	129866959	(29479014)	+	MIR	SINE/MIR	46	254	(8)	3749991
1516	19.4	0.0	3.3	chr7	129889844	129890147	(29455826)	+	AluJo	SINE/Alu	2	295	(17)	3750030
59	31.6	0.0	0.0	chr7	129890231	129890387	(29455586)	+	(AT)n	Simple_repeat	1	157	(0)	3750031
1922	12.7	3.8	1.1	chr7	129890388	129890671	(29455302)	C	AluSq2	SINE/Alu	(21)	292	1	3750032
320	25.6	12.5	4.6	chr7	130069466	130069706	(29276267)	+	L4_B_Mam	LINE/RTE-X	4623	4885	(56)	3750513
525	27.0	6.1	3.1	chr7	130069760	130069969	(29276004)	C	L1M5	LINE/L1	(611)	5554	5341	3750514
2373	9.9	0.3	1.0	chr7	130072737	130072747	(29273226)	C	AluSx1	SINE/Alu	(21)	291	283	3750515
28	0.0	0.0	0.0	chr7	130072748	130072774	(29273199)	+	(ATTT)n	Simple_repeat	1	27	(0)	3750516
2373	9.9	0.3	1.0	chr7	130072775	130073055	(29272918)	C	AluSx1	SINE/Alu	(30)	282	1	3750515
9204	8.4	1.8	2.6	chr7	130244972	130247066	(29098907)	+	L1PA13	LINE/L1	4089	6163	(0)	3750848
358	24.4	3.1	1.6	chr7	131231732	131231856	(28114117)	C	UCON72	Unknown	(56)	133	7	3752418
282	34.2	8.8	6.7	chr7	134211969	134212266	(25133707)	C	MLT1O	LTR/ERVL-MaLR	(180)	362	58	3757126
222	27.6	6.5	0.0	chr7	134212347	134212404	(25133569)	C	MIRb	SINE/MIR	(15)	253	192	3757127
12	20.1	2.6	2.6	chr7	135977720	135977757	(23368216)	+	(TTCC)n	Simple_repeat	1	39	(0)	3759917
12	23.1	0.0	2.6	chr7	135977742	135977779	(23368194)	+	(CCCT)n	Simple_repeat	1	38	(0)	3759918
2900	10.5	4.1	1.8	chr7	135982177	135982630	(23363343)	C	MER4C	LTR/ERV1	(0)	465	1	3759926
1655	18.4	1.4	5.7	chr7	136093269	136093636	(23252337)	C	MLT1A0	LTR/ERVL-MaLR	(13)	352	1	3760131
405	27.1	3.8	4.0	chr7	136093779	136093953	(23252020)	+	L1MEi	LINE/L1	1310	1539	(968)	3760132
4398	11.1	0.3	0.9	chr7	137345641	137346278	(21999695)	C	MER41B	LTR/ERV1	(0)	634	1	3761844
1138	18.6	1.4	2.3	chr7	137346279	137346338	(21999635)	+	MER20	DNA/hAT-Charlie	160	218	(1)	3761843
2074	11.8	0.0	5.1	chr7	138257090	138257402	(21088571)	+	AluY	SINE/Alu	1	297	(14)	3763229
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
1962	14.1	10.6	1.4	chr7	138259798	138260156	(21085817)	+	LTR8A	LTR/ERV1	1	396	(331)	3763234
4871	2.9	0.0	0.2	chr7	139091867	139092425	(20253548)	C	LTR6B	LTR/ERV1	(0)	558	1	3764901
1603	17.7	1.1	2.8	chr7	139111661	139111942	(20234031)	+	AluJr	SINE/Alu	1	277	(35)	3764948
128	13.8	5.2	2.0	chr7	139111946	139112231	(20233742)	+	A-rich	Low_complexity	1	301	(0)	3764949
13	13.2	0.0	0.0	chr7	140838051	140838075	(18507898)	+	(ACC)n	Simple_repeat	1	25	(0)	3768247
209	36.6	2.6	1.8	chr7	141726612	141726725	(17619248)	C	MIRb	SINE/MIR	(41)	227	113	3769736
206	35.6	1.4	0.0	chr7	141726922	141726994	(17618979)	+	MIRc	SINE/MIR	3	76	(192)	3769737
378	35.1	11.3	3.5	chr7	143370222	143370360	(15975613)	+	L2b	LINE/L2	1858	2005	(1414)	3771820
3628	10.4	2.7	1.1	chr7	143370361	143370905	(15975068)	+	MER41A	LTR/ERV1	1	554	(0)	3771821
620	25.4	9.7	4.8	chr7	144834627	144835065	(14510908)	+	LTR36	LTR/ERV1	88	611	(0)	3773749
13	19.0	8.3	0.0	chr7	149027905	149027952	(10318021)	+	(CCCTCT)n	Simple_repeat	1	52	(0)	3779849
4381	10.9	3.0	0.7	chr7	150322212	150322830	(9023143)	+	MER41B	LTR/ERV1	1	634	(0)	3781881
476	32.0	4.9	3.5	chr7	150404351	150404609	(8941364)	+	MIRc	SINE/MIR	6	268	(0)	3782013
1917	15.3	0.7	0.3	chr7	150431310	150431597	(8914376)	C	AluJr	SINE/Alu	(17)	295	7	3782065
235	32.4	3.5	0.9	chr7	150433632	150433743	(8912230)	C	CR1_Mam	LINE/CR1	(74)	2130	2016	3782068
214	33.7	3.4	0.0	chr7	150433806	150433891	(8912082)	C	MIRb	SINE/MIR	(73)	195	107	3782069
627	33.5	1.6	7.0	chr7	150960123	150960290	(8385683)	+	MIR	SINE/MIR	5	172	(90)	3782707
511	31.5	6.3	1.8	chr7	150969122	150969347	(8376626)	+	MIRc	SINE/MIR	11	247	(21)	3782719
748	27.3	8.8	2.5	chr7	151925757	151926041	(7419932)	C	L3	LINE/CR1	(1597)	2502	2198	3784260
330	28.9	4.2	8.1	chr7	151926052	151926175	(7419798)	+	MIRb	SINE/MIR	18	136	(132)	3784262
694	26.8	11.9	6.8	chr7	151926204	151926681	(7419292)	+	MLT1H1	LTR/ERVL-MaLR	51	555	(0)	3784263
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
383	33.9	7.5	5.2	chr7	153405609	153405879	(5940094)	+	L2b	LINE/L2	2783	3072	(303)	3786883
1711	12.8	0.4	1.2	chr7	153405880	153406129	(5939844)	C	AluSx1	SINE/Alu	(21)	291	44	3786884
378	32.7	4.9	9.8	chr7	153406130	153406364	(5939609)	+	L2b	LINE/L2	3073	3283	(92)	3786883
1055	27.0	7.1	8.2	chr7	153407735	153407952	(5938021)	C	L1MEc	LINE/L1	(3417)	2902	2713	3786888
40	2.6	0.0	0.0	chr7	153407953	153407991	(5937982)	+	(TG)n	Simple_repeat	1	39	(0)	3786889
1312	25.3	6.6	3.4	chr7	153407992	153408695	(5937278)	C	L1MEc	LINE/L1	(3607)	2712	1977	3786888
2050	23.2	10.1	0.2	chr7	153408696	153409197	(5936776)	+	MLT1F1	LTR/ERVL-MaLR	1	557	(12)	3786890
4089	5.9	1.7	0.4	chr7	154676662	154677185	(4668788)	C	HERV1_LTRd	LTR/ERV1	(4)	531	1	3788600
21	20.0	3.7	1.8	chr7	155003088	155003141	(4342832)	+	(CG)n	Simple_repeat	1	56	(0)	3789015
14	27.5	2.9	2.8	chr7	155003419	155003487	(4342486)	+	G-rich	Low_complexity	1	71	(0)	3789016
2035	13.7	1.0	0.0	chr7	155022163	155022455	(4323518)	+	AluSz	SINE/Alu	1	296	(16)	3789051
1961	23.6	3.4	5.1	chr7	155022456	155022882	(4323091)	+	ERVL-E-int	LTR/ERVL	5227	5662	(5)	3789050
1795	13.9	3.5	1.5	chr7	156923298	156923632	(2422341)	C	LTR62	LTR/ERVL	(367)	342	1	3791565
493	19.5	20.7	0.6	chr7	156923658	156923673	(2422300)	+	LTR59	LTR/ERV1	1	25	(697)	3791566
2509	8.0	0.0	0.0	chr7	156923674	156923975	(2421998)	+	AluSx1	SINE/Alu	1	302	(10)	3791567
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
2278	9.7	1.3	0.0	chr7	158857793	158858090	(487883)	C	AluSp	SINE/Alu	(10)	303	1	3793803
758	25.6	9.8	5.6	chr7	158858091	158858437	(487536)	C	HAL1ME	LINE/L1	(217)	2248	1874	3793801
305	22.8	7.5	1.2	chr7	158904694	158904850	(441123)	C	MIR3	SINE/MIR	(81)	187	5	3793888
263	24.2	0.0	0.0	chr7	158904850	158904915	(441058)	+	MIRc	SINE/MIR	160	225	(43)	3793889
13	13.2	0.0	0.0	chr7	158904995	158905019	(440954)	+	(AAAT)n	Simple_repeat	1	25	(0)	3793890
2370	7.2	0.3	1.6	chr8	12559566	12559870	(132578766)	+	AluYm1	SINE/Alu	1	301	(10)	3811203
35	0.0	0.0	0.0	chr8	12559871	12559900	(132578736)	+	(AT)n	Simple_repeat	1	30	(0)	3811204
211	35.7	0.9	3.5	chr8	12559901	12560825	(132577811)	+	(GTAT)n	Simple_repeat	1	933	(0)	3811205
3222	14.8	17.1	0.3	chr8	20276169	20276886	(124861750)	+	MER21B	LTR/ERVL	1	844	(24)	3822561
4516	9.6	3.0	0.5	chr8	20276942	20277559	(124861077)	+	MER41B	LTR/ERV1	1	634	(0)	3822562
1469	13.2	8.8	1.1	chr8	22292629	22292998	(122845638)	C	LTR54	LTR/ERV1	(43)	467	3	3825929
4016	13.2	3.2	0.2	chr8	29617240	29617852	(115520784)	+	MER41B	LTR/ERV1	1	632	(2)	3838219
461	25.8	2.6	2.6	chr8	30137576	30137591	(115001045)	C	MIRb	SINE/MIR	(58)	210	193	3839129
4106	13.1	3.6	7.6	chr8	30137592	30138312	(115000324)	+	LTR8	LTR/ERV1	1	691	(0)	3839130
978	6.5	0.8	0.0	chr8	33512782	33512904	(111625732)	+	AluYc3	SINE/Alu	177	300	(0)	3844635
12	28.7	0.0	0.0	chr8	41490310	41490351	(103648285)	+	(GCCCCA)n	Simple_repeat	1	42	(0)	3857098
3608	12.4	4.2	0.9	chr8	41818754	41819299	(103319337)	+	MER61E	LTR/ERV1	1	565	(4)	3857650
3654	11.8	2.5	3.0	chr8	49110428	49110995	(96027641)	+	MER61E	LTR/ERV1	1	565	(4)	3864039
3794	19.5	4.3	1.6	chr8	53944746	53945626	(91193010)	+	L1MB7	LINE/L1	5270	6175	(9)	3870182
28	0.0	0.0	0.0	chr8	54022277	54022302	(91116334)	+	(GCG)n	Simple_repeat	1	26	(0)	3870336
4104	12.3	0.3	5.4	chr8	55731576	55732243	(89406393)	C	MER41B	LTR/ERV1	(0)	634	1	3872768
22	0.0	0.0	0.0	chr8	55732298	55732321	(89406315)	+	(AC)n	Simple_repeat	1	24	(0)	3872775
35	0.0	0.0	0.0	chr8	55732343	55732372	(89406264)	+	(CA)n	Simple_repeat	1	30	(0)	3872776
350	32.4	15.0	0.9	chr8	67063450	67063667	(78074969)	+	L2c	LINE/L2	2914	3167	(220)	3888645
1498	22.1	1.9	8.2	chr8	67366063	67366342	(77772294)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	113	3889129
4914	8.4	0.2	1.9	chr8	67366343	67366533	(77772103)	+	MER41B	LTR/ERV1	1	190	(444)	3889130
18	16.0	0.0	0.0	chr8	85107298	85107332	(60031304)	+	(GGC)n	Simple_repeat	1	35	(0)	3914051
221	31.5	1.1	1.1	chr8	85245228	85245317	(59893319)	+	MIRb	SINE/MIR	167	256	(12)	3914277
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
4362	13.3	0.8	0.2	chr8	93873619	93874248	(51264388)	C	MER41B	LTR/ERV1	(0)	634	1	3925971
3659	15.7	6.1	4.2	chr8	93874249	93874676	(51263960)	C	LTR8A	LTR/ERV1	(2)	725	316	3925972
15	31.6	0.0	1.6	chr8	95133656	95133719	(50004917)	+	G-rich	Low_complexity	1	64	(0)	3928263
18	29.8	1.8	0.0	chr8	95133723	95133779	(50004857)	+	(GC)n	Simple_repeat	1	58	(0)	3928264
16	18.5	0.0	2.6	chr8	95133990	95134028	(50004608)	+	(CGC)n	Simple_repeat	1	39	(0)	3928265
2226	12.4	12.9	0.9	chr8	100501529	100501976	(44636660)	C	LTR54	LTR/ERV1	(0)	510	1	3936907
82	16.8	2.2	2.2	chr8	100501977	100502089	(44636547)	+	GA-rich	Low_complexity	66	180	(0)	3936908
1648	8.2	0.8	0.4	chr8	101137959	101138192	(44000444)	+	7SK	RNA	1	235	(96)	3938223
3193	16.2	9.5	1.0	chr8	124448843	124449422	(20689214)	C	MER51A	LTR/ERV1	(0)	634	1	3973735
1229	22.6	8.4	11.7	chr8	124449423	124449529	(20689107)	C	MER41C	LTR/ERV1	(413)	108	2	3973734
4680	7.2	0.2	0.0	chr8	124450022	124450574	(20688062)	C	MER41A	LTR/ERV1	(0)	554	1	3973736
280	35.4	8.2	2.8	chr8	124649397	124649614	(20489022)	+	MIRb	SINE/MIR	27	257	(11)	3974069
878	23.0	7.5	9.7	chr8	125942191	125942570	(19196066)	+	MER92C	LTR/ERV1	220	590	(0)	3976644
7046	20.5	5.9	4.0	chr8	125942574	125943935	(19194701)	+	MER92-int	LTR/ERV1	4	2033	(2903)	3976644
380	30.0	0.8	3.0	chr8	127895170	127895188	(17243448)	+	MIR	SINE/MIR	132	149	(113)	3980342
2247	13.0	0.0	0.0	chr8	127895189	127895496	(17243140)	+	AluSx	SINE/Alu	1	308	(4)	3980345
5441	18.8	7.6	1.7	chr8	129570349	129571541	(15567095)	+	L1M4	LINE/L1	4496	5749	(435)	3983389
314	29.0	9.5	0.8	chr8	129574598	129574722	(15563914)	+	L2	LINE/L2	2853	2989	(430)	3983396
334	36.6	7.4	4.5	chr8	129574738	129575117	(15563519)	+	L2c	LINE/L2	2941	3341	(46)	3983397
2195	12.7	0.0	0.3	chr8	130032186	130032485	(15106151)	C	AluSx1	SINE/Alu	(13)	299	1	3984235
182	29.6	3.6	0.0	chr8	130032489	130032542	(15106094)	C	MIRc	SINE/MIR	(181)	87	32	3984232
2557	14.4	2.7	2.5	chr8	130032606	130032655	(15105981)	+	MER65A	LTR/ERV1	1	48	(397)	3984236
2053	15.7	0.3	0.3	chr8	130032656	130032961	(15105675)	+	AluJo	SINE/Alu	1	306	(6)	3984237
16	5.8	11.1	0.0	chr8	143976785	143976820	(1161816)	+	(CGAGCCC)n	Simple_repeat	1	40	(0)	4006906
1072	8.4	0.0	0.0	chr8	144061158	144061311	(1077325)	+	MER41A	LTR/ERV1	1	154	(400)	4007036
1672	7.8	0.9	0.5	chr8	144061319	144061535	(1077101)	+	AluSx	SINE/Alu	85	302	(10)	4007037
17	21.1	1.9	3.7	chr8	144522867	144522919	(615717)	+	(CGG)n	Simple_repeat	1	54	(0)	4007704
221	29.1	9.1	2.6	chr9	19103188	19103300	(119291417)	+	MIRc	SINE/MIR	25	145	(123)	4035564
446	28.9	6.3	10.8	chr9	19103223	19103379	(119291338)	+	L2	LINE/L2	335	494	(2925)	4035565
1437	13.8	2.6	2.2	chr9	19199118	19199346	(119195371)	C	LTR54	LTR/ERV1	(280)	230	1	4035835
626	14.3	0.9	0.0	chr9	19199348	19199459	(119195258)	+	L1MB5	LINE/L1	5139	5251	(895)	4035821
323	36.8	3.1	0.6	chr9	33474215	33474370	(104920347)	+	L2c	LINE/L2	2572	2731	(688)	4055492
14	17.1	11.9	0.0	chr9	68705180	68705238	(69689479)	+	(GGCAGCC)n	Simple_repeat	1	66	(0)	4080300
286	35.8	3.9	2.0	chr9	77986862	77987012	(60407705)	+	L2a	LINE/L2	3267	3420	(6)	4095085
484	36.2	12.4	2.5	chr9	77987193	77987591	(60407126)	C	MamRTE1	LINE/RTE-BovB	(907)	2905	2462	4095081
309	29.8	1.5	3.0	chr9	95002269	95002403	(43392314)	C	L2a	LINE/L2	(1)	3425	3293	4120617
952	11.6	11.5	3.7	chr9	95002413	95002627	(43392090)	+	L1MC2	LINE/L1	6086	6319	(25)	4120618
221	34.2	5.6	2.6	chr9	95002631	95002786	(43391931)	C	L2a	LINE/L2	(160)	3227	3067	4120617
4412	6.5	0.4	0.2	chr9	96420849	96421401	(41973316)	+	MER41A	LTR/ERV1	1	554	(0)	4122837
2663	13.6	0.8	0.2	chr9	98045313	98045711	(40349006)	+	MER57B1	LTR/ERV1	1	401	(0)	4125675
5498	12.6	0.2	2.9	chr9	98045712	98046431	(40348286)	+	MER57-int	LTR/ERV1	1	714	(6823)	4125675
536	18.4	23.9	3.6	chr9	98257085	98257309	(40137408)	+	Arthur1C	DNA/hAT-Tip100	79	363	(0)	4126184
357	28.8	8.1	0.8	chr9	98429797	98429922	(39964795)	+	L2a	LINE/L2	2880	3015	(404)	4126491
2643	22.2	7.1	4.5	chr9	98429923	98430004	(39964713)	C	L1MEc	LINE/L1	(5549)	851	767	4126492
2409	8.2	0.0	1.6	chr9	98430005	98430310	(39964407)	+	AluSc	SINE/Alu	1	301	(8)	4126493
3874	13.8	4.3	1.3	chr9	98851583	98852197	(39542520)	C	MER41B	LTR/ERV1	(0)	634	1	4127345
484	28.4	1.3	0.6	chr9	98852198	98852237	(39542480)	+	MIRb	SINE/MIR	226	264	(4)	4127344
3022	15.0	5.1	9.2	chr9	99073996	99074523	(39320194)	+	LTR9	LTR/ERV1	95	612	(0)	4127792
5070	8.3	1.7	0.2	chr9	99301912	99302535	(39092182)	+	MER41B	LTR/ERV1	1	634	(0)	4128193
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
4578	9.2	3.6	0.2	chr9	107675390	107675999	(30718718)	C	MER41B	LTR/ERV1	(0)	634	3	4141340
549	25.8	13.2	4.3	chr9	107676000	107676185	(30718532)	C	MIR	SINE/MIR	(49)	213	1	4141339
1092	30.0	5.6	0.5	chr9	107791484	107792054	(30602663)	C	L1ME3G	LINE/L1	(437)	487	106	4141594
367	33.1	3.5	0.7	chr9	107792097	107792236	(30602481)	+	MIRc	SINE/MIR	7	150	(118)	4141595
2449	27.1	10.4	5.0	chr9	112422260	112423337	(25971380)	+	L1MEj	LINE/L1	518	1668	(492)	4149808
2004	10.3	10.9	0.0	chr9	112423338	112423608	(25971109)	C	AluSq2	SINE/Alu	(9)	304	1	4149809
2449	27.1	10.4	5.0	chr9	112423609	112423686	(25971031)	+	L1MEj	LINE/L1	1669	1744	(416)	4149808
595	22.1	12.8	4.2	chr9	112423700	112423713	(25971004)	C	L1MC5	LINE/L1	(1744)	4402	4389	4149810
2396	11.3	0.7	0.0	chr9	112423714	112424013	(25970704)	C	AluSx1	SINE/Alu	(10)	302	1	4149811
1158	18.4	9.0	2.3	chr9	113345533	113345962	(25048755)	C	LTR54	LTR/ERV1	(5)	505	4	4151469
4193	11.2	2.8	3.0	chr9	114557588	114557916	(23836801)	C	MER41B	LTR/ERV1	(290)	344	1	4153921
1994	19.3	4.4	6.4	chr9	114557917	114558081	(23836636)	C	Tigger9b	DNA/TcMar-Tigger	(315)	309	149	4153918
1543	18.9	0.0	0.0	chr9	120830907	120831154	(17563563)	C	AluJr	SINE/Alu	(35)	277	30	4165799
204	33.3	16.4	3.1	chr9	121286416	121286709	(17108008)	+	L2b	LINE/L2	2970	3310	(65)	4166674
472	26.2	17.8	0.5	chr9	121286786	121286956	(17107761)	+	MIRb	SINE/MIR	30	220	(48)	4166675
1967	9.4	8.9	0.0	chr9	127698906	127699181	(10695536)	C	AluSz	SINE/Alu	(9)	303	1	4178821
13	19.4	0.0	2.7	chr9	128191414	128191450	(10203267)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	4179938
16	40.8	0.0	1.3	chr9	130448296	130448371	(7946346)	+	(AC)n	Simple_repeat	1	76	(0)	4185027
21	0.0	0.0	0.0	chr9	130448423	130448445	(7946272)	+	(CA)n	Simple_repeat	1	23	(0)	4185028
2265	12.4	0.0	0.0	chr9	130448565	130448863	(7945854)	C	AluSz6	SINE/Alu	(13)	299	1	4185029
313	31.6	7.2	7.0	chr9	133147097	133147426	(5247291)	+	L2b	LINE/L2	2949	3279	(96)	4190135
11	17.1	2.9	2.8	chr9	136363573	136363607	(2031110)	+	(GCCCCA)n	Simple_repeat	1	36	(0)	4194302
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
307	25.0	8.8	6.8	chr9	136674425	136674557	(1720160)	+	MIRb	SINE/MIR	46	181	(87)	4194629
6413	12.8	3.0	0.7	chr9	136788798	136789776	(1604941)	C	LTR5B	LTR/ERVK	(0)	1002	1	4194804
2381	8.5	0.0	0.0	chr9	136789887	136790180	(1604537)	C	AluSg4	SINE/Alu	(16)	294	1	4194808
3968	10.7	2.0	0.0	chr9	137075103	137075645	(1319072)	+	MER41A	LTR/ERV1	1	554	(0)	4195198
27	3.5	0.0	0.0	chr9	137618904	137618933	(775784)	+	(GCGCAG)n	Simple_repeat	1	30	(0)	4195881
2170	20.6	6.6	4.4	chrX	2502800	2503215	(153537680)	+	MER41D	LTR/ERV1	1	428	(129)	4362999
1943	16.8	2.3	0.0	chrX	3701101	3701398	(152339497)	C	AluJr	SINE/Alu	(0)	312	8	4365396
4211	10.3	0.0	0.0	chrX	3701577	3702130	(152338765)	+	MER41A	LTR/ERV1	1	554	(0)	4365397
340	25.8	5.2	0.0	chrX	11351754	11351881	(144689014)	+	Tigger16b	DNA/TcMar-Tigger	176	310	(26)	4377886
202	16.1	0.0	0.0	chrX	11352077	11352107	(144688788)	C	MamSINE1	SINE/tRNA-RTE	(243)	47	17	4377887
232	30.6	3.3	4.5	chrX	11368031	11368123	(144672772)	C	L2b	LINE/L2	(0)	3426	3297	4377910
3677	12.3	0.3	3.4	chrX	15883108	15883485	(140157410)	C	MER41B	LTR/ERV1	(271)	363	1	4385119
1317	20.1	11.0	6.3	chrX	15883558	15883999	(140156896)	+	LTR29	LTR/ERV1	158	622	(0)	4385121
661	26.3	6.4	5.5	chrX	30748379	30748830	(125292065)	+	MLT1H2	LTR/ERVL-MaLR	62	543	(6)	4408727
66	44.2	0.0	0.0	chrX	44876849	44877122	(111163773)	+	(AT)n	Simple_repeat	1	274	(0)	4429942
270	34.8	5.8	5.5	chrX	66019369	66019772	(90021123)	+	L2b	LINE/L2	2996	3385	(2)	4453230
1503	15.1	4.7	0.4	chrX	71365525	71365769	(84675126)	C	AluJo	SINE/Alu	(56)	256	1	4461412
788	19.4	7.0	7.0	chrX	103098300	103098543	(52942352)	C	LTR23-int	LTR/ERV1	(3927)	2260	2017	4498052
3110	18.2	3.7	12.3	chrX	103098747	103099552	(52941343)	C	MER50	LTR/ERV1	(0)	734	1	4498056
4126	9.9	5.8	1.3	chrX	110000728	110001332	(46039563)	C	MER41B	LTR/ERV1	(0)	634	1	4507751
378	36.0	11.9	6.0	chrX	118562202	118563022	(37477873)	+	L2c	LINE/L2	2502	3383	(4)	4519481
332	36.1	0.0	0.8	chrX	118563174	118563293	(37477602)	+	MIRc	SINE/MIR	89	207	(61)	4519482
14	13.1	0.0	0.0	chrX	136496720	136496745	(19544150)	+	(TCAT)n	Simple_repeat	1	26	(0)	4546082
198	28.0	0.0	0.0	chrX	136496766	136496815	(19544080)	C	L2c	LINE/L2	(39)	3348	3299	4546083
14	19.1	1.8	7.1	chrX	153935042	153935096	(2105799)	+	(GCCG)n	Simple_repeat	1	56	(0)	4570963
1103	11.4	26.5	0.0	chrX	154411162	154411380	(1629515)	+	AluJb	SINE/Alu	1	298	(14)	4571812