## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1419-Bigelowiella_natans-50.2x36mers.unique.noNM-chrC-chrM.bam] OUTPUT=L1419-Bigelowiella_natans-50.2x36mers.unique.noNM-chrC-chrM.dedup.bam METRICS_FILE=L1419-Bigelowiella_natans-50.2x36mers.unique.noNM-chrC-chrM.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Apr 16 04:42:23 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14759381	0	0	780313	144317	0.052869	163017793

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.009434
2.0	1.931491
3.0	2.773734
4.0	3.543072
5.0	4.245815
6.0	4.887728
7.0	5.474077
8.0	6.009671
9.0	6.498903
10.0	6.945787
11.0	7.353989
12.0	7.726856
13.0	8.067447
14.0	8.378557
15.0	8.662737
16.0	8.922317
17.0	9.159429
18.0	9.376016
19.0	9.573855
20.0	9.754568
21.0	9.919639
22.0	10.070422
23.0	10.208152
24.0	10.333961
25.0	10.448879
26.0	10.55385
27.0	10.649735
28.0	10.737319
29.0	10.817323
30.0	10.890401
31.0	10.957153
32.0	11.018128
33.0	11.073824
34.0	11.124699
35.0	11.171171
36.0	11.21362
37.0	11.252394
38.0	11.287812
39.0	11.320164
40.0	11.349716
41.0	11.37671
42.0	11.401367
43.0	11.42389
44.0	11.444463
45.0	11.463256
46.0	11.480421
47.0	11.496101
48.0	11.510424
49.0	11.523506
50.0	11.535457
51.0	11.546373
52.0	11.556344
53.0	11.565452
54.0	11.573771
55.0	11.581371
56.0	11.588312
57.0	11.594653
58.0	11.600445
59.0	11.605735
60.0	11.610568
61.0	11.614982
62.0	11.619014
63.0	11.622697
64.0	11.626062
65.0	11.629135
66.0	11.631942
67.0	11.634506
68.0	11.636848
69.0	11.638988
70.0	11.640942
71.0	11.642727
72.0	11.644357
73.0	11.645847
74.0	11.647207
75.0	11.64845
76.0	11.649585
77.0	11.650622
78.0	11.651569
79.0	11.652434
80.0	11.653225
81.0	11.653946
82.0	11.654606
83.0	11.655208
84.0	11.655758
85.0	11.656261
86.0	11.65672
87.0	11.657139
88.0	11.657522
89.0	11.657872
90.0	11.658191
91.0	11.658483
92.0	11.65875
93.0	11.658994
94.0	11.659216
95.0	11.659419
96.0	11.659605
97.0	11.659774
98.0	11.659929
99.0	11.660071
100.0	11.6602

