Index of /kundaje/marinovg/oak/papers/2022_organelles_TFs/2019-05-BPNet-modles

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]2018-11-05-ENCODE-TF-ChIP-seq-for-BPNet.files2019-05-23 06:26 1.1M 
[ ]2019-02-22-ENCODE-TF-ChIP-seq-for-BPNet-hg38.files2019-05-23 06:22 1.8M 
[ ]CH12.LX-MAFK-mouse-ENCSR000ERB.optimal_idr.bed2019-05-23 05:32 505K 
[ ]CH12.LX-MAX-mouse-ENCSR000ERL.optimal_idr.bed2019-05-23 05:35 721K 
[ ]CH12.LX-USF1-mouse-ENCSR973SOG.optimal_idr.bed2019-05-23 05:35 190K 
[ ]CH12.LX-USF2-mouse-ENCSR000ERJ.optimal_idr.bed2019-05-23 05:35 136K 
[ ]ES-E14-MAFK-mouse-ENCSR604XDL.optimal_idr.bed2019-05-23 05:32 394K 
[ ]GM12878-JUND-human-ENCSR000DYS-optimal_idr.bed2019-05-23 06:28 174K 
[ ]GM12878-JUND-human-ENCSR000EYV-optimal_idr.bed2019-05-23 06:28 58K 
[ ]H1-hESC-JUND-human-ENCSR000BKP-optimal_idr.bed2019-05-23 06:28 329K 
[ ]H1-hESC-JUND-human-ENCSR000EBZ-optimal_idr.bed2019-05-23 06:28 296K 
[ ]MEL_cell_line-MAFK-mouse-ENCSR000ETK.optimal_idr.bed2019-05-23 05:32 209K 
[ ]MEL_cell_line-MAX-mouse-ENCSR000ETX.optimal_idr.bed2019-05-23 05:35 672K 
[ ]MEL_cell_line-USF1-mouse-ENCSR705HGT.optimal_idr.bed2019-05-23 05:35 424K 
[ ]MEL_cell_line-USF2-mouse-ENCSR000ETF.optimal_idr.bed2019-05-23 05:35 100K 
[ ]MEL_cell_line-USF2-mouse-ENCSR000ETW.optimal_idr.bed2019-05-23 05:35 32K 
[ ]MEL_cell_line-dimethyl_sulfoxide-2_percent-5_day-MAFK-mouse-ENCSR000ESY.optimal_idr.bed2019-05-23 05:32 56K 
[DIR]figures/2019-05-31 22:28 -  
[DIR]hg19-peak-files/2019-05-23 08:02 -  
[ ]hg19.BPNet.cov.ATF3-dataspec.yaml2019-05-23 08:00 6.7K 
[DIR]hg19.BPNet.cov.ATF3/2019-05-31 05:48 -  
[ ]hg19.BPNet.cov.ATF7-dataspec.yaml2019-05-23 08:00 3.8K 
[DIR]hg19.BPNet.cov.ATF7/2019-05-31 05:48 -  
[ ]hg19.BPNet.cov.BACH1-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.BACH1/2019-05-31 05:48 -  
[ ]hg19.BPNet.cov.BHLHE40-dataspec.yaml2019-05-23 08:00 6.8K 
[DIR]hg19.BPNet.cov.BHLHE40/2019-05-31 05:48 -  
[ ]hg19.BPNet.cov.CEBPB-dataspec.yaml2019-05-23 08:00 6.7K 
[DIR]hg19.BPNet.cov.CEBPB/2019-05-28 10:03 -  
[ ]hg19.BPNet.cov.CREB1-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.CREB1/2019-05-28 11:25 -  
[ ]hg19.BPNet.cov.CTBP1-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.CTBP1/2019-05-28 12:08 -  
[ ]hg19.BPNet.cov.CTCF-dataspec.all.yaml2019-05-28 19:27 112K 
[ ]hg19.BPNet.cov.CTCF-dataspec.yaml2019-05-28 19:31 8.6K 
[DIR]hg19.BPNet.cov.CTCF/2019-05-28 19:58 -  
[ ]hg19.BPNet.cov.CUX1-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.CUX1/2019-05-28 23:22 -  
[ ]hg19.BPNet.cov.E2F1-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.E2F1/2019-05-28 23:43 -  
[ ]hg19.BPNet.cov.ELF1-dataspec.yaml2019-05-23 08:00 4.3K 
[DIR]hg19.BPNet.cov.ELF1/2019-05-29 06:21 -  
[ ]hg19.BPNet.cov.FOS-dataspec.yaml2019-05-23 08:00 6.8K 
[DIR]hg19.BPNet.cov.FOS/2019-05-29 05:23 -  
[ ]hg19.BPNet.cov.FOSL1-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.FOSL1/2019-05-29 06:39 -  
[ ]hg19.BPNet.cov.FOSL2-dataspec.yaml2019-05-23 08:00 1.0K 
[DIR]hg19.BPNet.cov.FOSL2/2019-05-29 06:57 -  
[ ]hg19.BPNet.cov.FOXA2-dataspec.yaml2019-05-23 08:00 3.9K 
[DIR]hg19.BPNet.cov.FOXA2/2019-05-29 07:50 -  
[ ]hg19.BPNet.cov.FOXP2-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.FOXP2/2019-05-29 08:20 -  
[ ]hg19.BPNet.cov.GABPA-dataspec.yaml2019-05-23 08:00 7.7K 
[DIR]hg19.BPNet.cov.GABPA/2019-05-29 09:00 -  
[ ]hg19.BPNet.cov.HSF1-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.HSF1/2019-05-29 09:15 -  
[ ]hg19.BPNet.cov.JUN-dataspec.yaml2019-05-23 08:00 6.8K 
[DIR]hg19.BPNet.cov.JUN/2019-05-29 10:26 -  
[ ]hg19.BPNet.cov.JUNB-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.JUNB/2019-05-29 09:33 -  
[ ]hg19.BPNet.cov.JUND-dataspec.yaml2019-05-23 08:00 13K 
[DIR]hg19.BPNet.cov.JUND/2019-05-29 16:17 -  
[ ]hg19.BPNet.cov.MAFF-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.MAFF/2019-05-29 17:55 -  
[ ]hg19.BPNet.cov.MAFK-dataspec.yaml2019-05-23 08:00 8.6K 
[DIR]hg19.BPNet.cov.MAFK/2019-05-29 22:20 -  
[ ]hg19.BPNet.cov.MAX-dataspec.yaml2019-05-23 08:00 9.6K 
[DIR]hg19.BPNet.cov.MAX/2019-05-30 01:59 -  
[ ]hg19.BPNet.cov.MAZ-dataspec.yaml2019-05-23 08:00 5.7K 
[DIR]hg19.BPNet.cov.MAZ/2019-05-30 03:12 -  
[ ]hg19.BPNet.cov.MTA2-dataspec.yaml2019-05-23 08:00 3.8K 
[DIR]hg19.BPNet.cov.MTA2/2019-05-30 03:50 -  
[ ]hg19.BPNet.cov.MYC-dataspec-single-task.yaml2019-05-30 03:28 567  
[ ]hg19.BPNet.cov.MYC-dataspec.yaml2019-05-23 08:00 11K 
[DIR]hg19.BPNet.cov.MYC-single-task/2019-05-30 06:12 -  
[ ]hg19.BPNet.cov.NANOG-dataspec-single-task.yaml2019-05-30 03:29 582  
[ ]hg19.BPNet.cov.NANOG-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.NANOG-single-task/2019-05-30 06:15 -  
[ ]hg19.BPNet.cov.NFE2-dataspec-single-task.yaml2019-05-30 03:29 570  
[ ]hg19.BPNet.cov.NFE2-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.NFE2-single-task/2019-05-30 06:23 -  
[ ]hg19.BPNet.cov.NFE2L2-dataspec-single-task.yaml2019-05-30 06:03 1.0K 
[ ]hg19.BPNet.cov.NFE2L2-dataspec.yaml2019-05-23 08:00 3.9K 
[DIR]hg19.BPNet.cov.NFE2L2-single-task/2019-05-30 06:30 -  
[ ]hg19.BPNet.cov.NFYA-dataspec-single-task.yaml2019-05-30 06:03 1.0K 
[ ]hg19.BPNet.cov.NFYA-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.NFYA-single-task/2019-05-30 06:35 -  
[ ]hg19.BPNet.cov.NFYB-dataspec-single-task.yaml2019-05-30 06:03 1.0K 
[ ]hg19.BPNet.cov.NFYB-dataspec.yaml2019-05-23 08:00 2.9K 
[DIR]hg19.BPNet.cov.NFYB-single-task/2019-05-30 06:42 -  
[ ]hg19.BPNet.cov.NR2C2-dataspec-single-task.yaml2019-05-30 06:03 1.0K 
[ ]hg19.BPNet.cov.NR2C2-dataspec.yaml2019-05-23 08:00 3.9K 
[DIR]hg19.BPNet.cov.NR2C2-single-task/2019-05-30 06:46 -  
[ ]hg19.BPNet.cov.NR2F1-dataspec-single-task.yaml2019-05-30 06:03 1.0K 
[ ]hg19.BPNet.cov.NR2F1-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.NR2F1-single-task/2019-05-30 07:03 -  
[ ]hg19.BPNet.cov.NR3C1-dataspec-single-task.yaml2019-05-30 03:27 2.0K 
[ ]hg19.BPNet.cov.NR3C1-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.NR3C1-single-task/2019-05-30 07:10 -  
[ ]hg19.BPNet.cov.PKNOX1-dataspec-single-task.yaml2019-05-30 06:05 1.0K 
[ ]hg19.BPNet.cov.PKNOX1-dataspec.yaml2019-05-23 08:00 3.9K 
[DIR]hg19.BPNet.cov.PKNOX1-single-task/2019-05-30 07:30 -  
[ ]hg19.BPNet.cov.POU5F1-dataspec-single-task.yaml2019-05-30 06:05 1.1K 
[ ]hg19.BPNet.cov.POU5F1-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.POU5F1-single-task/2019-05-30 07:38 -  
[ ]hg19.BPNet.cov.RAD21-dataspec-single-task.yaml2019-05-30 06:05 1.0K 
[ ]hg19.BPNet.cov.RAD21-dataspec.yaml2019-05-23 08:00 13K 
[DIR]hg19.BPNet.cov.RAD21-single-task/2019-05-30 08:07 -  
[ ]hg19.BPNet.cov.RFX1-dataspec-single-task.yaml2019-05-30 06:06 1.0K 
[ ]hg19.BPNet.cov.RFX1-dataspec.yaml2019-05-23 08:00 4.8K 
[DIR]hg19.BPNet.cov.RFX1-single-task/2019-05-30 08:24 -  
[ ]hg19.BPNet.cov.RFX5-dataspec-single-task.yaml2019-05-30 06:06 1.0K 
[ ]hg19.BPNet.cov.RFX5-dataspec.yaml2019-05-23 08:00 7.6K 
[DIR]hg19.BPNet.cov.RFX5-single-task/2019-05-30 08:36 -  
[ ]hg19.BPNet.cov.RXRA-dataspec-single-task.yaml2019-05-30 06:06 1.0K 
[ ]hg19.BPNet.cov.RXRA-dataspec.yaml2019-05-23 08:00 4.8K 
[DIR]hg19.BPNet.cov.RXRA-single-task/2019-05-30 08:56 -  
[ ]hg19.BPNet.cov.SREBF1-dataspec-single-task.yaml2019-05-30 06:06 1.0K 
[ ]hg19.BPNet.cov.SREBF1-dataspec.yaml2019-05-23 08:00 3.9K 
[DIR]hg19.BPNet.cov.SREBF1-single-task/2019-05-30 09:07 -  
[ ]hg19.BPNet.cov.SRF-dataspec-single-task.yaml2019-05-30 06:07 1.0K 
[ ]hg19.BPNet.cov.SRF-dataspec.yaml2019-05-23 08:00 3.9K 
[DIR]hg19.BPNet.cov.SRF-single-task/2019-05-30 09:19 -  
[ ]hg19.BPNet.cov.TAF15-dataspec-single-task.yaml2019-05-30 06:07 575  
[ ]hg19.BPNet.cov.TAF15-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.TAF15-single-task/2019-05-30 09:22 -  
[ ]hg19.BPNet.cov.TARDBP-dataspec-single-task.yaml2019-05-30 06:07 585  
[ ]hg19.BPNet.cov.TARDBP-dataspec.yaml2019-05-23 08:00 7.7K 
[DIR]hg19.BPNet.cov.TARDBP-single-task/2019-05-30 09:29 -  
[ ]hg19.BPNet.cov.TBP-dataspec-single-task.yaml2019-05-30 03:27 4.8K 
[ ]hg19.BPNet.cov.TBP-dataspec.yaml2019-05-23 08:00 4.8K 
[DIR]hg19.BPNet.cov.TBP-single-task/2019-05-30 09:59 -  
[ ]hg19.BPNet.cov.USF1-dataspec-single-task.yaml2019-05-30 06:08 1.0K 
[ ]hg19.BPNet.cov.USF1-dataspec.yaml2019-05-23 08:00 3.9K 
[DIR]hg19.BPNet.cov.USF1-single-task/2019-05-30 10:21 -  
[ ]hg19.BPNet.cov.YBX1-dataspec-single-task.yaml2019-05-30 06:08 1.0K 
[ ]hg19.BPNet.cov.YBX1-dataspec.yaml2019-05-23 08:00 3.8K 
[DIR]hg19.BPNet.cov.YBX1-single-task/2019-05-30 10:27 -  
[ ]hg19.BPNet.cov.YY1-dataspec-single-task.yaml2019-05-30 06:08 576  
[ ]hg19.BPNet.cov.YY1-dataspec.yaml2019-05-23 08:00 9.0K 
[DIR]hg19.BPNet.cov.YY1-single-task/2019-05-30 10:34 -  
[ ]hg19.BPNet.cov.ZFX-dataspec-single-task.yaml2019-05-30 06:09 1.0K 
[ ]hg19.BPNet.cov.ZFX-dataspec.yaml2019-05-23 08:00 4.8K 
[DIR]hg19.BPNet.cov.ZFX-single-task/2019-05-30 10:42 -  
[ ]hg19.BPNet.cov.ZKSCAN1-dataspec-single-task.yaml2019-05-30 06:09 579  
[ ]hg19.BPNet.cov.ZKSCAN1-dataspec.yaml2019-05-23 08:00 3.9K 
[DIR]hg19.BPNet.cov.ZKSCAN1-single-task/2019-05-30 10:48 -  
[ ]hg19.BPNet.cov.ZNF263-dataspec-single-task.yaml2019-05-30 06:09 582  
[ ]hg19.BPNet.cov.ZNF263-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.ZNF263-single-task/2023-08-18 02:00 -  
[ ]hg19.BPNet.cov.eGFP-CEBPG-dataspec.yaml2019-05-23 08:00 3.0K 
[DIR]hg19.BPNet.cov.eGFP-CEBPG/2019-05-29 00:32 -  
[ ]hg19.BPNet.cov.eGFP-ELF1-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.eGFP-ELF1/2019-05-29 00:50 -  
[ ]hg19.BPNet.cov.eGFP-GABPA-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.eGFP-GABPA/2019-05-29 01:02 -  
[ ]hg19.BPNet.cov.eGFP-ZNF639-dataspec.yaml2019-05-23 08:00 2.0K 
[DIR]hg19.BPNet.cov.eGFP-ZNF639/2019-05-29 01:21 -  
[ ]hg19.cov.CTCF.config2019-05-28 19:30 7.5K 
[ ]hg19.cov.config2019-05-23 07:52 315K 
[ ]hg19.train.hp.yaml2019-05-23 08:10 1.2K 
[ ]mm10.5p.config2019-05-23 05:42 9.6K 
[ ]mm10.BPNet.5p.MAFK-dataspec-single-task.yaml2019-05-30 03:27 4.2K 
[ ]mm10.BPNet.5p.MAFK-dataspec.yaml2019-05-23 05:42 4.2K 
[DIR]mm10.BPNet.5p.MAFK-single-task/2019-05-30 11:19 -  
[ ]mm10.BPNet.5p.MAX-dataspec-single-task.yaml2019-05-30 03:27 2.0K 
[ ]mm10.BPNet.5p.MAX-dataspec.yaml2019-05-23 05:42 2.0K 
[DIR]mm10.BPNet.5p.MAX-single-task/2019-05-30 11:43 -  
[ ]mm10.BPNet.5p.USF1-dataspec-single-task.yaml2019-05-30 03:27 2.0K 
[ ]mm10.BPNet.5p.USF1-dataspec.yaml2019-05-23 05:42 2.0K 
[DIR]mm10.BPNet.5p.USF1-single-task/2019-05-30 12:06 -  
[ ]mm10.BPNet.5p.USF2-dataspec-single-task.yaml2019-05-30 03:27 3.0K 
[ ]mm10.BPNet.5p.USF2-dataspec.yaml2019-05-23 05:42 3.0K 
[DIR]mm10.BPNet.5p.USF2-single-task/2019-05-30 12:16 -  
[ ]mm10.BPNet.cov.MAFK-dataspec-single-task.yaml2019-05-30 03:27 8.1K 
[ ]mm10.BPNet.cov.MAFK-dataspec.yaml2019-05-23 05:42 8.1K 
[DIR]mm10.BPNet.cov.MAFK-single-task/2019-05-30 13:06 -  
[DIR]mm10.BPNet.cov.MAFK/2019-05-31 05:48 -  
[ ]mm10.BPNet.cov.MAX-dataspec-single-task.yaml2019-05-30 03:27 2.0K 
[ ]mm10.BPNet.cov.MAX-dataspec.yaml2019-05-23 05:42 2.0K 
[DIR]mm10.BPNet.cov.MAX-single-task/2019-05-30 13:33 -  
[DIR]mm10.BPNet.cov.MAX/2019-05-31 05:48 -  
[ ]mm10.BPNet.cov.USF1-dataspec-single-task.yaml2019-05-30 03:27 2.0K 
[ ]mm10.BPNet.cov.USF1-dataspec.yaml2019-05-23 05:42 2.0K 
[DIR]mm10.BPNet.cov.USF1-single-task/2019-05-30 13:46 -  
[DIR]mm10.BPNet.cov.USF1/2019-05-23 19:25 -  
[ ]mm10.BPNet.cov.USF2-dataspec-single-task.yaml2019-05-30 03:27 3.0K 
[ ]mm10.BPNet.cov.USF2-dataspec.yaml2019-05-23 05:42 3.0K 
[DIR]mm10.BPNet.cov.USF2-single-task/2019-05-30 13:53 -  
[DIR]mm10.BPNet.cov.USF2/2019-05-23 19:33 -  
[ ]mm10.cov.config2019-05-23 05:42 13K 
[ ]mm10.train.hp.yaml2019-05-23 06:55 1.2K 
[ ]z2019-05-30 21:33 12K 
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