export PATH=$PATH:/oak/stanford/groups/akundaje/marinovg/programs/bwa-0.7.17; module load system; module load parallel/20180122; module load java; export PATH=$PATH:/oak/stanford/groups/akundaje/marinovg/programs/juicer_tools.1.8.9/; scripts/juicer.sh -t 20 -D /oak/stanford/groups/akundaje/marinovg/papers/2021_Haloferax-chromatin/2021-09-14-Hi-C-rerun/juicer-H.volcanii_WT_stationary-pooled-rerun -y none -s none -p /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.chrom.sizes -y none -s none -z /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/bwa-indexes/all.fa