python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1212-Haloferax-KAS-standing_culture/L1212-Haloferax-KAS-standing_culture.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1212-Haloferax-KAS-standing_culture -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1524-Haloferax_volcanii_standing_rep1-KAS/L1524-Haloferax_volcanii_standing_rep1-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1524-Haloferax_volcanii_standing_rep1-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1525-Haloferax_volcanii_standing_rep2-KAS/L1525-Haloferax_volcanii_standing_rep2-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1525-Haloferax_volcanii_standing_rep2-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1526-Haloferax_volcanii_42C_rep1-KAS/L1526-Haloferax_volcanii_42C_rep1-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1526-Haloferax_volcanii_42C_rep1-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1527-Haloferax_volcanii_42C_rep2-KAS/L1527-Haloferax_volcanii_42C_rep2-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1527-Haloferax_volcanii_42C_rep2-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1528-Haloferax_volcanii_37C_rep1-KAS/L1528-Haloferax_volcanii_37C_rep1-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1528-Haloferax_volcanii_37C_rep1-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1529-Haloferax_volcanii_37C_rep2-KAS/L1529-Haloferax_volcanii_37C_rep2-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1529-Haloferax_volcanii_37C_rep2-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1530-Haloferax_volcanii_23C_rep1-KAS/L1530-Haloferax_volcanii_23C_rep1-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1530-Haloferax_volcanii_23C_rep1-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1531-Haloferax_volcanii_23C_rep2-KAS/L1531-Haloferax_volcanii_23C_rep2-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1531-Haloferax_volcanii_23C_rep2-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1532-Haloferax_volcanii_4C_rep1-KAS/L1532-Haloferax_volcanii_4C_rep1-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1532-Haloferax_volcanii_4C_rep1-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1533-Haloferax_volcanii_4C_rep2-KAS/L1533-Haloferax_volcanii_4C_rep2-KAS.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1533-Haloferax_volcanii_4C_rep2-KAS -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1684-Haloferax_volcanii_exponential/L1684-Haloferax_volcanii_exponential.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1684-Haloferax_volcanii_exponential -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1685-Haloferax_volcanii_exponential/L1685-Haloferax_volcanii_exponential.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1685-Haloferax_volcanii_exponential -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1686-Haloferax_volcanii_exponential/L1686-Haloferax_volcanii_exponential.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1686-Haloferax_volcanii_exponential -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1687-Haloferax_volcanii_stationary/L1687-Haloferax_volcanii_stationary.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1687-Haloferax_volcanii_stationary -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1688-Haloferax_volcanii_stationary/L1688-Haloferax_volcanii_stationary.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1688-Haloferax_volcanii_stationary -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1689-Haloferax_volcanii_stationary/L1689-Haloferax_volcanii_stationary.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1689-Haloferax_volcanii_stationary -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1690-Haloferax_volcanii_standing/L1690-Haloferax_volcanii_standing.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1690-Haloferax_volcanii_standing -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-KAS/L1691-Haloferax_volcanii_standing/L1691-Haloferax_volcanii_standing.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1691-Haloferax_volcanii_standing -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1538-standing_rep1-ATAC-1uL-1pFA/L1538-standing_rep1-ATAC-1uL-1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1538-standing_rep1-ATAC-1uL-1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1539-standing_rep2-ATAC-1uL-1pFA/L1539-standing_rep2-ATAC-1uL-1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1539-standing_rep2-ATAC-1uL-1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1663-Haloferax_volcanii_exponential_ATAC_1pFA_rep1/L1663-Haloferax_volcanii_exponential_ATAC_1pFA_rep1.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1663-Haloferax_volcanii_exponential_ATAC_1pFA_rep1 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1664-Haloferax_volcanii_exponential_ATAC_1pFA_rep2/L1664-Haloferax_volcanii_exponential_ATAC_1pFA_rep2.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1664-Haloferax_volcanii_exponential_ATAC_1pFA_rep2 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1665-Haloferax_volcanii_exponential_ATAC_1pFA_rep3/L1665-Haloferax_volcanii_exponential_ATAC_1pFA_rep3.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1665-Haloferax_volcanii_exponential_ATAC_1pFA_rep3 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1666-Haloferax_volcanii_stationary_ATAC_1pFA_rep1/L1666-Haloferax_volcanii_stationary_ATAC_1pFA_rep1.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1666-Haloferax_volcanii_stationary_ATAC_1pFA_rep1 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1667-Haloferax_volcanii_stationary_ATAC_1pFA_rep2/L1667-Haloferax_volcanii_stationary_ATAC_1pFA_rep2.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1667-Haloferax_volcanii_stationary_ATAC_1pFA_rep2 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1668-Haloferax_volcanii_stationary_ATAC_1pFA_rep3/L1668-Haloferax_volcanii_stationary_ATAC_1pFA_rep3.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1668-Haloferax_volcanii_stationary_ATAC_1pFA_rep3 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1669-Haloferax_volcanii_standing_ATAC_1pFA_rep1/L1669-Haloferax_volcanii_standing_ATAC_1pFA_rep1.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1669-Haloferax_volcanii_standing_ATAC_1pFA_rep1 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1670-Haloferax_volcanii_standing_ATAC_1pFA_rep2/L1670-Haloferax_volcanii_standing_ATAC_1pFA_rep2.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1670-Haloferax_volcanii_standing_ATAC_1pFA_rep2 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1671-Haloferax_volcanii_standing_ATAC_1pFA_rep3/L1671-Haloferax_volcanii_standing_ATAC_1pFA_rep3.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1671-Haloferax_volcanii_standing_ATAC_1pFA_rep3 -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1552-42C_rep1-1uL/L1552-42C_rep1-1uL.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1552-42C_rep1-1uL -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1553-42C_rep2-1uL/L1553-42C_rep2-1uL.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1553-42C_rep2-1uL -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1554-37C_rep1-1uL/L1554-37C_rep1-1uL.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1554-37C_rep1-1uL -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1568-42C_rep1-1uL-0_1pFA/L1568-42C_rep1-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1568-42C_rep1-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1569-42C_rep2-1uL-0_1pFA/L1569-42C_rep2-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1569-42C_rep2-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1570-37C_rep1-1uL-0_1pFA/L1570-37C_rep1-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1570-37C_rep1-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1571-37C_rep2-1uL-0_1pFA/L1571-37C_rep2-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1571-37C_rep2-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1572-23C_rep1-1uL-0_1pFA/L1572-23C_rep1-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1572-23C_rep1-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1573-23C_rep2-1uL-0_1pFA/L1573-23C_rep2-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1573-23C_rep2-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1574-4C_rep1-1uL-0_1pFA/L1574-4C_rep1-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1574-4C_rep1-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1575-4C_rep2-1uL-0_1pFA/L1575-4C_rep2-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1575-4C_rep2-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1534-standing_rep1-ATAC-1uL-0_1pFA/L1534-standing_rep1-ATAC-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1534-standing_rep1-ATAC-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1535-standing_rep2-ATAC-1uL-0_1pFA/L1535-standing_rep2-ATAC-1uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1535-standing_rep2-ATAC-1uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1536-standing_rep1-ATAC-10uL-0_1pFA/L1536-standing_rep1-ATAC-10uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1536-standing_rep1-ATAC-10uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1537-standing_rep2-ATAC-10uL-0_1pFA/L1537-standing_rep2-ATAC-10uL-0_1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1537-standing_rep2-ATAC-10uL-0_1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1538-standing_rep1-ATAC-1uL-1pFA/L1538-standing_rep1-ATAC-1uL-1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1538-standing_rep1-ATAC-1uL-1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1539-standing_rep2-ATAC-1uL-1pFA/L1539-standing_rep2-ATAC-1uL-1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1539-standing_rep2-ATAC-1uL-1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1540-standing_rep1-ATAC-10uL-1pFA/L1540-standing_rep1-ATAC-10uL-1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1540-standing_rep1-ATAC-10uL-1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1541-standing_rep2-ATAC-10uL-1pFA/L1541-standing_rep2-ATAC-10uL-1pFA.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1541-standing_rep2-ATAC-10uL-1pFA -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1542-standing_rep1-ATAC-1uL/L1542-standing_rep1-ATAC-1uL.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1542-standing_rep1-ATAC-1uL -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1543-standing_rep2-ATAC-1uL/L1543-standing_rep2-ATAC-1uL.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1543-standing_rep2-ATAC-1uL -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1544-standing_rep1-ATAC-10uL/L1544-standing_rep1-ATAC-10uL.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1544-standing_rep1-ATAC-10uL -window 10
python ~/code/signalAroundCoordinate-individual-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/all.fixed.TSS-0bp.bed 0 1 3 500 1500 /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-ATAC/L1545-standing_rep2-ATAC-10uL/L1545-standing_rep2-ATAC-10uL.2x36mers.unique.dedup.bigWig signal-around-TSS-500-1500-L1545-standing_rep2-ATAC-10uL -window 10