Index of /kundaje/marinovg/oak/papers/2020_SMAC-seq-yeast/2019-04-12-revision-plots

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]2018-12-13+2018_09_13-0h_Diamide.CG-only.reads.minus.cutoff_0.5.coverage.bgz2019-04-16 23:41 3.3M 
[ ]2018-12-13+2018_09_13-0h_Diamide.CG-only.reads.minus.cutoff_0.5.coverage.bgz.tbi2019-04-16 23:42 5.7K 
[ ]2018-12-13+2018_09_13-0h_Diamide.CG-only.reads.plus.cutoff_0.5.coverage.bgz2019-04-16 23:41 3.4M 
[ ]2018-12-13+2018_09_13-0h_Diamide.CG-only.reads.plus.cutoff_0.5.coverage.bgz.tbi2019-04-16 23:42 5.8K 
[ ]2018-12-13+2018_09_13-0h_Diamide.GC-only.reads.minus.cutoff_0.5.coverage.bgz2019-04-16 23:41 4.2M 
[ ]2018-12-13+2018_09_13-0h_Diamide.GC-only.reads.minus.cutoff_0.5.coverage.bgz.tbi2019-04-16 23:42 6.1K 
[ ]2018-12-13+2018_09_13-0h_Diamide.GC-only.reads.plus.cutoff_0.5.coverage.bgz2019-04-16 23:41 4.2M 
[ ]2018-12-13+2018_09_13-0h_Diamide.GC-only.reads.plus.cutoff_0.5.coverage.bgz.tbi2019-04-16 23:42 5.9K 
[ ]2018_12_13_0h_Diamide_additional_reads.CG-only.reads.minus.cutoff_0.5.coverage.bgz2019-04-16 23:41 3.2M 
[ ]2018_12_13_0h_Diamide_additional_reads.CG-only.reads.minus.cutoff_0.5.coverage.bgz.tbi2019-04-16 23:42 5.7K 
[ ]2018_12_13_0h_Diamide_additional_reads.CG-only.reads.plus.cutoff_0.5.coverage.bgz2019-04-16 23:41 3.2M 
[ ]2018_12_13_0h_Diamide_additional_reads.CG-only.reads.plus.cutoff_0.5.coverage.bgz.tbi2019-04-16 23:42 5.8K 
[ ]2018_12_13_0h_Diamide_additional_reads.GC-only.reads.minus.cutoff_0.5.coverage.bgz2019-04-16 23:41 4.0M 
[ ]2018_12_13_0h_Diamide_additional_reads.GC-only.reads.minus.cutoff_0.5.coverage.bgz.tbi2019-04-16 23:42 6.1K 
[ ]2018_12_13_0h_Diamide_additional_reads.GC-only.reads.plus.cutoff_0.5.coverage.bgz2019-04-16 23:41 4.0M 
[ ]2018_12_13_0h_Diamide_additional_reads.GC-only.reads.plus.cutoff_0.5.coverage.bgz.tbi2019-04-16 23:42 5.9K 
[ ]CG.mot2019-04-16 09:04 61  
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF1-vs-Hesselbreth_footprints-intersection12019-04-13 14:07 35K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF1-vs-Hesselbreth_footprints-intersection22019-04-13 14:07 14K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF1-vs-Hesselbreth_footprints-outersection12019-04-13 14:07 76K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF1-vs-Hesselbreth_footprints-outersection22019-04-13 14:07 199K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CBF1-vs-Hesselbreth_footprints-intersection12019-04-13 14:07 5.4K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CBF1-vs-Hesselbreth_footprints-intersection22019-04-13 14:07 1.8K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CBF1-vs-Hesselbreth_footprints-outersection12019-04-13 14:07 62K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CBF1-vs-Hesselbreth_footprints-outersection22019-04-13 14:07 211K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RAP1-vs-Hesselbreth_footprints-intersection12019-04-13 14:07 21K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RAP1-vs-Hesselbreth_footprints-intersection22019-04-13 14:07 7.3K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RAP1-vs-Hesselbreth_footprints-outersection12019-04-13 14:07 184K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RAP1-vs-Hesselbreth_footprints-outersection22019-04-13 14:07 206K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REB1-vs-Hesselbreth_footprints-intersection12019-04-13 14:07 35K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REB1-vs-Hesselbreth_footprints-intersection22019-04-13 14:07 15K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REB1-vs-Hesselbreth_footprints-outersection12019-04-13 14:07 56K 
[TXT]FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REB1-vs-Hesselbreth_footprints-outersection22019-04-13 14:07 198K 
[ ]GC.mot2019-04-16 09:05 61  
[ ]H4S47C.60bp-radius-vs-sacCer3.CG.PWMmatches2019-04-16 09:13 8.9M 
[ ]H4S47C.60bp-radius-vs-sacCer3.CG.PWMmatches.hist2019-04-16 09:19 1.4M 
[ ]H4S47C.60bp-radius-vs-sacCer3.CG.PWMmatches.hist.hist2019-04-16 09:21 117  
[ ]H4S47C.60bp-radius-vs-sacCer3.GC.PWMmatches2019-04-16 09:13 12M 
[ ]H4S47C.60bp-radius-vs-sacCer3.GC.PWMmatches.hist2019-04-16 09:19 1.4M 
[ ]H4S47C.60bp-radius-vs-sacCer3.GC.PWMmatches.hist.hist2019-04-16 09:21 141  
[ ]Hesselbreth_footprints.bed2019-04-13 13:53 213K 
[ ]TSS-100bp-vs-sacCer3.CG.PWMmatches2019-04-16 09:13 2.6M 
[ ]TSS-100bp-vs-sacCer3.CG.PWMmatches.hist2019-04-16 09:19 154K 
[ ]TSS-100bp-vs-sacCer3.CG.PWMmatches.hist.hist2019-04-16 09:21 125  
[ ]TSS-100bp-vs-sacCer3.GC.PWMmatches2019-04-16 09:13 3.4M 
[ ]TSS-100bp-vs-sacCer3.GC.PWMmatches.hist2019-04-16 09:19 155K 
[ ]TSS-100bp-vs-sacCer3.GC.PWMmatches.hist.hist2019-04-16 09:21 138  
[ ]TSS-correlations.rep1-rep2-30min.NMI.100bp.files2019-04-13 22:02 442  
[ ]TSS-correlations.rep1-rep2-30min.NMI.100bp.table2019-04-13 22:02 380K 
[ ]TSS-correlations.rep1-rep2.NMI.100bp.files2019-04-13 21:53 440  
[ ]TSS-correlations.rep1-rep2.NMI.100bp.table2019-04-13 21:53 86K 
[ ]TSS-correlations.rep1-rep2.NMI.200bp.files2019-04-13 21:58 440  
[ ]TSS-correlations.rep1-rep2.NMI.200bp.table2019-04-13 21:59 53K 
[ ]TSS-correlations.rep1-rep2.NMI.q2.100bp.files2019-04-13 22:04 440  
[ ]TSS-correlations.rep1-rep2.NMI.q2.100bp.table2019-04-13 22:04 86K 
[ ]readLenDistribution.2018-05-15_Yeast_Run2019-04-13 15:03 527  
[ ]readLenDistribution.2018-07-05_Diamide_0min2019-04-13 15:02 516  
[ ]readLenDistribution.2018-07-05_Diamide_30min2019-04-13 15:03 529  
[ ]readLenDistribution.2018-07-05_Diamide_60min2019-04-13 15:04 532  
[ ]readLenDistribution.2018-09-13_Diamide_30min2019-04-13 15:05 537  
[ ]readLenDistribution.2018-12-13+2018_09_13-0h_Diamide2019-04-13 15:07 540  
[ ]readLenDistribution.2019_01_16-60min_Diamide-rep22019-04-13 15:06 536  
[ ]sacCer3.CG.PWMmatches.set2019-04-16 09:08 6.9M 
[ ]sacCer3.GC.PWMmatches.set2019-04-16 09:08 8.8M 
[ ]signal-around-H4S47C-100bp-2018-12-13+2018_09_13-0h_Diamide.CG-only.minus.minCov502019-04-16 23:43 7.9K 
[ ]signal-around-H4S47C-100bp-2018-12-13+2018_09_13-0h_Diamide.CG-only.plus.minCov502019-04-16 23:43 7.9K 
[ ]signal-around-H4S47C-100bp-2018-12-13+2018_09_13-0h_Diamide.GC-only.minus.minCov502019-04-16 23:43 7.9K 
[ ]signal-around-H4S47C-100bp-2018-12-13+2018_09_13-0h_Diamide.GC-only.plus.minCov502019-04-16 23:43 7.9K 
[ ]signal-around-H4S47C-100bp-2018_12_13_0h_Diamide_additional_CG-only.minus.minCov502019-04-16 23:43 7.9K 
[ ]signal-around-H4S47C-100bp-2018_12_13_0h_Diamide_additional_CG-only.plus.minCov502019-04-16 23:43 7.9K 
[ ]signal-around-H4S47C-100bp-2018_12_13_0h_Diamide_additional_GC-only.minus.minCov502019-04-16 23:43 7.9K 
[ ]signal-around-H4S47C-100bp-2018_12_13_0h_Diamide_additional_GC-only.plus.minCov502019-04-16 23:43 7.9K 
[ ]signalAround-GSE93662_Abf1_ChIP-exo.DGF-SRP000620.2x36mers.unique.dedup.5p2019-04-13 13:38 19K 
[ ]signalAround-GSE93662_Abf1_ChIP-exo.L464-Diamide-0_min-rep1.2x36mers.unique.dedup.5p2019-04-13 13:29 19K 
[ ]signalAround-GSE93662_Cbf1_ChIP-exo.DGF-SRP000620.2x36mers.unique.dedup.5p2019-04-13 13:37 19K 
[ ]signalAround-GSE93662_Cbf1_ChIP-exo.L464-Diamide-0_min-rep1.2x36mers.unique.dedup.5p2019-04-13 13:29 19K 
[ ]signalAround-GSE93662_Rap1_ChIP-exo.DGF-SRP000620.2x36mers.unique.dedup.5p2019-04-13 13:37 19K 
[ ]signalAround-GSE93662_Rap1_ChIP-exo.L464-Diamide-0_min-rep1.2x36mers.unique.dedup.5p2019-04-13 13:29 19K 
[ ]signalAround-GSE93662_Reb1_ChIP-exo.DGF-SRP000620.2x36mers.unique.dedup.5p2019-04-13 13:38 19K 
[ ]signalAround-GSE93662_Reb1_ChIP-exo.L464-Diamide-0_min-rep1.2x36mers.unique.dedup.5p2019-04-13 13:29 19K 
[ ]signalAround-Hesselbreth_footprints.DGF-SRP000620.2x36mers.unique.dedup.5p2019-04-13 13:54 19K 
[ ]signalAround-Hesselbreth_footprints.L464-Diamide-0_min-rep1.2x36mers.unique.dedup.5p2019-04-13 13:54 19K 
[ ]signalAroundPeaks-nano-FIMO-CIS-BP-ABF1-vs-Hesselbreth_footprints-intersection22019-04-13 14:11 48K 
[ ]signalAroundPeaks-nano-FIMO-CIS-BP-CBF1-vs-Hesselbreth_footprints-intersection22019-04-13 14:11 47K 
[ ]signalAroundPeaks-nano-FIMO-CIS-BP-RAP1-vs-Hesselbreth_footprints-intersection22019-04-13 14:11 48K 
[ ]signalAroundPeaks-nano-FIMO-CIS-BP-REB1-vs-Hesselbreth_footprints-intersection22019-04-13 14:11 48K 
[ ]signalAroundPeaks-nano-Hesselbreth_footprints.1bp2019-04-13 14:02 40K 
[ ]signalAroundPeaks-nano-Hesselbreth_footprints.10bp2019-04-13 14:01 4.0K 
[ ]z2019-04-16 09:02 972  
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