Index of /kundaje/marinovg/oak/papers/2020_SMAC-seq-yeast/2018-11-24-plots

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]AAD6.TSS-600bp.bed2018-12-14 20:34 41  
[ ]AAD6.TSS-1000bp.bed2018-12-14 20:34 41  
[ ]BTN2.TSS-600bp.bed2018-12-17 09:12 44  
[ ]CTT1.TSS-600bp.bed2018-12-06 19:27 44  
[ ]CTT1.TSS-1000bp.bed2018-12-06 19:27 44  
[ ]DCS1.TSS-600bp.bed2018-12-06 19:27 44  
[ ]DCS1.TSS-1000bp.bed2018-12-06 19:27 44  
[ ]DNAse-ATAC-vs-SMAC.tar.gz2019-10-31 10:34 3.5M 
[ ]Fig2b.bed2018-12-02 11:57 20  
[ ]Fig2b.tar.gz2019-10-31 10:34 6.6M 
[ ]GRE2.TSS-600bp.bed2018-12-17 09:12 41  
[ ]HOR7.TSS-600bp.bed2018-12-06 18:57 49  
[ ]HOR7.TSS-1000bp.bed2018-12-06 18:57 49  
[ ]HSF1-clusters-all-sites-kmeans.tar.gz2019-10-31 10:35 1.5G 
[ ]HSF1-individual-sites.tar.gz2019-10-31 10:34 349M 
[ ]HSP10.TSS-600bp.bed2018-12-17 09:12 88  
[ ]HSP12.TSS-600bp.bed2018-12-06 18:57 44  
[ ]HSP12.TSS-1000bp.bed2018-12-06 18:57 44  
[ ]HSP26.TSS-600bp.bed2018-12-06 18:43 44  
[ ]HSP26.TSS-1000bp.bed2018-12-06 18:43 44  
[ ]HSP31.TSS-600bp.bed2018-12-06 20:04 46  
[ ]HSP31.TSS-1000bp.bed2018-12-06 20:04 46  
[ ]HSP82.TSS-600bp.bed2018-12-06 20:04 43  
[ ]HSP82.TSS-1000bp.bed2018-12-06 20:04 43  
[ ]HSP104.TSS-600bp.bed2018-12-06 20:04 44  
[ ]HSP104.TSS-1000bp.bed2018-12-06 20:04 44  
[ ]MBF1.TSS-600bp.bed2018-12-17 09:12 47  
[ ]MetanucleosomePlot1D-TF.tar.gz2019-10-31 10:30 1.9M 
[ ]MetanucleosomePlot1D.tar.gz2019-10-31 10:31 106M 
[ ]MetanucleosomePlot2D.tar.gz2019-10-31 10:30 2.7M 
[ ]NMI.2018-05-15_Yeast_Run.50cov_10bp_500bp.files2018-11-27 02:13 175K 
[ ]NMI.2018-05-15_Yeast_Run.50cov_20bp_500bp.files2018-11-27 02:13 175K 
[ ]NMI.2018-05-15_Yeast_Run.50cov_50bp_1000bp.files2018-11-27 02:13 176K 
[ ]NMI.2018-05-15_Yeast_Run.100cov_10bp_500bp.files2018-11-27 02:13 176K 
[ ]NMI.2018-05-15_Yeast_Run.100cov_20bp_500bp.files2018-11-27 02:13 176K 
[ ]NMI.2018-05-15_Yeast_Run.100cov_50bp_1000bp.files2018-11-27 02:13 177K 
[ ]NMI.2018_07_05_Diamide_0min.50cov_10bp_500bp.files2018-12-05 17:53 218K 
[ ]NMI.2018_07_05_Diamide_0min.50cov_20bp_500bp.files2018-12-05 17:53 218K 
[ ]NMI.2018_07_05_Diamide_0min.50cov_50bp_1000.files2018-12-05 17:53 219K 
[ ]NMI.2018_07_05_Diamide_0min.50cov_50bp_1000bp.files2018-11-27 02:09 219K 
[ ]NMI.2018_07_05_Diamide_0min.100cov_10bp_500bp.files2018-12-05 17:53 219K 
[ ]NMI.2018_07_05_Diamide_0min.100cov_20bp_500bp.files2018-12-05 17:53 219K 
[ ]NMI.2018_07_05_Diamide_0min.100cov_50bp_1000.files2018-12-05 17:53 221K 
[ ]NMI.2018_07_05_Diamide_0min.100cov_50bp_1000bp.files2018-11-27 02:08 221K 
[ ]NMI.2018_07_05_Diamide_30min.50cov_10bp_500bp.files2018-12-05 17:54 221K 
[ ]NMI.2018_07_05_Diamide_30min.50cov_20bp_500bp.files2018-12-05 17:56 221K 
[ ]NMI.2018_07_05_Diamide_30min.50cov_50bp_1000.files2018-12-05 17:57 222K 
[ ]NMI.2018_07_05_Diamide_30min.50cov_50bp_1000bp.files2018-11-27 02:09 222K 
[ ]NMI.2018_07_05_Diamide_30min.100cov_10bp_500bp.files2018-12-05 17:53 222K 
[ ]NMI.2018_07_05_Diamide_30min.100cov_20bp_500bp.files2018-12-05 17:55 222K 
[ ]NMI.2018_07_05_Diamide_30min.100cov_50bp_1000.files2018-12-05 17:57 223K 
[ ]NMI.2018_07_05_Diamide_30min.100cov_50bp_1000bp.files2018-11-27 02:08 223K 
[ ]NMI.2018_07_05_Diamide_60min.50cov_10bp_500bp.files2018-12-05 17:59 221K 
[ ]NMI.2018_07_05_Diamide_60min.50cov_20bp_500bp.files2018-12-05 18:01 221K 
[ ]NMI.2018_07_05_Diamide_60min.50cov_50bp_1000.files2018-12-05 18:02 222K 
[ ]NMI.2018_07_05_Diamide_60min.50cov_50bp_1000bp.files2018-11-27 02:09 222K 
[ ]NMI.2018_07_05_Diamide_60min.100cov_10bp_500bp.files2018-12-05 17:58 222K 
[ ]NMI.2018_07_05_Diamide_60min.100cov_20bp_500bp.files2018-12-05 18:00 222K 
[ ]NMI.2018_07_05_Diamide_60min.100cov_50bp_1000.files2018-12-05 18:01 223K 
[ ]NMI.2018_07_05_Diamide_60min.100cov_50bp_1000bp.files2018-11-27 02:08 223K 
[TXT]NMI.TIF-seq-updated.min50FPKM-genes.TSS-600bp.png.sh2018-12-04 09:31 566K 
[TXT]NMI.TIF-seq-updated.min50FPKM-genes.TSS-600bp.sh2018-12-03 20:57 1.0M 
[TXT]NMI.TIF-seq-updated.min50FPKM-genes.TSS-1000bp.sh2018-12-06 14:17 1.0M 
[ ]NMI.min50cov.1bp.TIF-seq-updated.CTT1.TSS-600bp.2018-07-05_Diamide_0min.CTT1.gz2018-12-05 15:11 362K 
[ ]NMI.min50cov.1bp.TIF-seq-updated.CTT1.TSS-600bp.2018-07-05_Diamide_30min.CTT1.gz2018-12-05 15:13 332K 
[ ]NMI.min50cov.1bp.TIF-seq-updated.CTT1.TSS-600bp.2018-07-05_Diamide_60min.CTT1.gz2018-12-05 15:13 310K 
[ ]NMI.min50cov.1bp.TIF-seq-updated.DCS1.TSS-600bp.2018-07-05_Diamide_0min.DCS1.gz2018-12-05 15:12 351K 
[ ]NMI.min50cov.1bp.TIF-seq-updated.DCS1.TSS-600bp.2018-07-05_Diamide_30min.DCS1.gz2018-12-05 15:11 303K 
[ ]NMI.min50cov.1bp.TIF-seq-updated.DCS1.TSS-600bp.2018-07-05_Diamide_60min.DCS1.gz2018-12-05 15:13 285K 
[ ]NMI.min50cov.1bp.TIF-seq-updated.min50FPKM-genes.TSS-600bp-png.tar.gz2019-10-31 10:32 263M 
[ ]NMI.min50cov.1bp.TIF-seq-updated.min50FPKM-genes.TSS-600bp.tar.gz2019-10-31 10:32 350M 
[ ]NMI.min50cov.1bp.TIF-seq-updated.min50FPKM-genes.TSS-1000bp.tar.gz2019-10-31 10:33 956M 
[ ]NMI.min50cov.10bp.TIF-seq-updated.min50FPKM-genes.TSS-600bp-png.tar.gz2019-10-31 10:31 16M 
[ ]NMI.min50cov.10bp.TIF-seq-updated.min50FPKM-genes.TSS-600bp.tar.gz2019-10-31 10:31 5.8M 
[ ]NMI.min50cov.10bp.TIF-seq-updated.min50FPKM-genes.TSS-1000bp-png.tar.gz2019-10-31 10:30 181  
[ ]NMI.min50cov.10bp.TIF-seq-updated.min50FPKM-genes.TSS-1000bp.tar.gz2019-10-31 10:31 15M 
[ ]ORC-ARS.bed2018-11-29 11:25 84  
[ ]RPL11A.TSS-600bp.bed2018-12-06 19:54 46  
[ ]RPL11A.TSS-1000bp.bed2018-12-06 19:54 46  
[ ]RPS10A.TSS-600bp.bed2018-12-06 19:55 45  
[ ]RPS10A.TSS-1000bp.bed2018-12-06 19:55 45  
[ ]RPS23B.TSS-600bp.bed2018-12-06 19:52 46  
[ ]RPS23B.TSS-1000bp.bed2018-12-06 19:52 46  
[ ]SRX1.TSS-600bp.bed2018-12-17 09:12 43  
[ ]SSA1.TSS-600bp.bed2018-12-17 09:12 42  
[ ]SSA2.TSS-600bp.bed2018-12-17 09:12 42  
[ ]SSA4.TSS-600bp.bed2018-12-17 09:12 42  
[ ]STI1.TSS-600bp.bed2018-12-17 09:12 43  
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TIF-seq-updated.min50FPKM-genes.TSS-600bp.bed2018-12-03 20:29 16K 
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TIF-seq-updated.min50FPKM-genes.TSS-1000bp.bed2018-12-06 14:16 16K 
[ ]SingleMoleculeStatesOverPositions-nucleosomes.tar.gz2019-10-31 10:33 113M 
[ ]SingleMoleculeStatesOverPositionsInARegion-2018_07_05_Diamide_0min.tar.gz2019-10-31 10:36 1.2M 
[ ]SingleMoleculeStatesOverPositionsInARegion-2018_09_13_Diamide_0min.tar.gz2019-10-31 10:36 1.1M 
[ ]SingleMoleculeStatesOverPositionsInARegion-for-figures.tar.gz2019-10-31 10:34 355M 
[ ]SingleMoleculeStatesOverPositionsInARegion-individual-genes-highly-expressed.tar.gz2019-10-31 10:33 26M 
[ ]SingleMoleculeStatesOverPositionsInARegion-individual-genes-lowly-expressed.tar.gz2019-10-31 10:33 2.1M 
[ ]SingleMoleculeStatesOverPositionsInARegion-quantile1-2018_07_05_Diamide_0min.tar.gz2019-10-31 10:33 206K 
[ ]SingleMoleculeStatesOverPositionsInARegion-quantile1-2018_09_13_Diamide_0min.tar.gz2019-10-31 10:33 194K 
[ ]SingleMoleculeStatesOverPositionsInARegion-quantile5-2018_07_05_Diamide_0min.tar.gz2019-10-31 10:33 214K 
[ ]SingleMoleculeStatesOverPositionsInARegion-quantile5-2018_09_13_Diamide_0min.tar.gz2019-10-31 10:33 203K 
[ ]SingleMoleculeStatesOverPositionsInARegion.tar.gz2019-10-31 10:33 252M 
[ ]TDH1.TSS-600bp.bed2018-12-17 09:12 42  
[ ]TF-footprints.tar.gz2019-10-31 10:34 9.4M 
[ ]TMA.bed2018-11-28 13:51 45  
[ ]TMA10.TSS-600bp.bed2018-12-06 16:08 45  
[ ]TMA10.TSS-1000bp.bed2018-12-06 16:08 45  
[ ]TSS-correlations.tar.gz2019-10-31 10:34 80M 
[ ]centromere-plots.tar.gz2019-10-31 10:34 89M 
[ ]metagene2D.tar.gz2019-10-31 10:34 370K 
[ ]plots-for-Matt.tar.gz2019-10-31 10:33 63M 
[ ]png.tar.gz2019-10-31 10:33 108M 
[ ]rDNA-NMI.tar.gz2019-10-31 10:32 4.1M 
[ ]rDNA-kmeans.tar.gz2019-10-31 10:33 769M 
[ ]rDNA.Reb1-NTS.bed2018-11-26 10:34 21  
[ ]rDNA.Reb1-NTS.tar.gz2019-10-31 10:33 738M 
[ ]rDNA.Reb1-NTS_ext.bed2018-12-04 19:52 20  
[ ]rDNA.Reb1-NTS_ext2.bed2018-12-04 20:00 20  
[ ]rDNA.bed2018-11-25 11:43 42  
[ ]rDNA.tar.gz2019-10-31 10:33 766M 
[ ]signal-around.tar.gz2019-10-31 10:32 244K 
[ ]snapshots.tar.gz2019-10-31 10:34 133  
[ ]z2018-12-10 15:19 49  
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