Index of /kundaje/marinovg/oak/papers/2020_SMAC-seq-yeast/2018-03-11-MiSeq-run

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]BismarckStats.files2018-03-21 07:47 1.3K 
[ ]BismarckStats.table2018-03-21 07:47 2.4K 
[ ]SAMstats-L131-Human_gDNA_untreated.Bismark_v0.19.0.bowtie2.clip.hg202018-03-21 07:56 158  
[ ]SAMstats-L132-S2_cells_CpC_CpG_N6mA.Bismark_v0.19.0.bowtie2.clip.dm62018-03-21 07:56 160  
[ ]SAMstats-L133-Human_gDNA_CpG_GpC.Bismark_v0.19.0.bowtie2.clip.hg202018-03-21 07:56 162  
[ ]SAMstats-L134-S2_cells_untreated.Bismark_v0.19.0.bowtie2.clip.dm62018-03-21 07:56 162  
[ ]SAMstats-L135-S_cerevisiae_SMAC_CpC_CpG_N6mA.Bismark_v0.19.0.bowtie2.clip.sacCer32018-03-21 07:56 163  
[ ]SAMstats-L136-Saccharomyces_mikate_dSMF_CpC_CpG.Bismark_v0.19.0.bowtie2.clip.Saccharomyces_mikatae-SGD2018-03-21 07:56 163  
[ ]SAMstats-L137-Saccharomyces_paradoxus_NOME-seq_100U.Bismark_v0.19.0.bowtie2.clip.Saccharomyces_paradoxus-SGD2018-03-21 07:56 163  
[ ]SAMstats-L138-Saccharomyces_paradoxus_NOME-seq_75U.Bismark_v0.19.0.bowtie2.clip.Saccharomyces_paradoxus-SGD2018-03-21 07:56 163  
[ ]SAMstats-L139-Saccharomyces_paradoxus_NOME-seq_25U.Bismark_v0.19.0.bowtie2.clip.Saccharomyces_paradoxus-SGD2018-03-21 07:56 163  
[ ]SAMstats-L140-Saccharomyces_paradoxus_NOME-seq_4U.Bismark_v0.19.0.bowtie2.clip.Saccharomyces_paradoxus-SGD2018-03-21 07:56 163  
[ ]SAMstats.files2018-03-21 07:56 1.2K 
[ ]SAMstats.table2018-03-21 07:56 842  
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TSS-100bp.expresion-quintile1.bed2018-03-21 07:56 58K 
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TSS-100bp.expresion-quintile2.bed2018-03-21 07:56 58K 
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TSS-100bp.expresion-quintile3.bed2018-03-21 07:56 58K 
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TSS-100bp.expresion-quintile4.bed2018-03-21 07:56 58K 
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TSS-100bp.expresion-quintile5.bed2018-03-21 07:56 57K 
[DIR]Saccharomyces_paradoxus-TSSs-L137/2018-03-21 07:56 -  
[TXT]SampleSheet.csv2018-03-21 07:56 897  
[ ]bismarck-L135-cross-species.condor2018-03-21 07:47 3.0K 
[ ]bismarck-SRR2013804-SE.condor2018-03-21 07:47 908  
[ ]bismarck-SRR2013804.condor2018-03-21 07:47 929  
[ ]bismarck-pbat-SE.condor2018-03-21 07:47 5.1K 
[ ]bismarck-pbat-clipped-bowtie2.condor2018-03-21 07:47 3.4K 
[ ]bismarck-pbat-clipped.condor2018-03-21 07:47 5.2K 
[ ]bismarck-pbat.condor2018-03-21 07:47 5.6K 
[ ]bismarck.condor2018-03-21 07:47 5.7K 
[ ]bismark_methylation_extractor.condor2018-03-21 07:47 3.6K 
[ ]cumulativeGeneProfiles.mikatae.50bp-smooth.500bp.table2018-03-21 07:47 60K 
[ ]cumulativeGeneProfiles.mikatae.50bp-smooth.1000bp.table2018-03-21 07:47 121K 
[ ]cumulativeGeneProfiles.mikatae.50bp-smooth.files2018-03-21 07:47 118  
[ ]cumulativeGeneProfiles.paradoxus.50bp-smooth.500bp.table2018-03-21 07:47 195K 
[ ]cumulativeGeneProfiles.paradoxus.50bp-smooth.1000bp.table2018-03-21 07:47 400K 
[ ]cumulativeGeneProfiles.paradoxus.50bp-smooth.files2018-03-21 07:47 488  
[ ]cumulativeGeneProfiles.sacCer3.50bp-smooth.500bp.table2018-03-21 07:47 60K 
[ ]cumulativeGeneProfiles.sacCer3.50bp-smooth.1000bp.table2018-03-21 07:47 121K 
[ ]cumulativeGeneProfiles.sacCer3.50bp-smooth.files2018-03-21 07:47 97  
[DIR]fastqc-L131_S1_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L131_S1_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L132_S2_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L132_S2_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L133_S3_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L133_S3_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L134_S4_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L134_S4_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L135_S5_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L135_S5_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L136_S6_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L136_S6_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L137_S7_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L137_S7_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L138_S8_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L138_S8_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L139_S9_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L139_S9_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]fastqc-L140_S10_L001_R1_001.fastq.5p9trim.gz_val_1/2018-03-21 07:47 -  
[DIR]fastqc-L140_S10_L001_R2_001.fastq.5p9trim.gz_val_2/2018-03-21 07:47 -  
[DIR]sacCer3-TSSs-expresion-quintile1/2018-03-21 07:53 -  
[DIR]sacCer3-TSSs-expresion-quintile2/2018-03-21 07:54 -  
[DIR]sacCer3-TSSs-expresion-quintile3/2018-03-21 07:55 -  
[DIR]sacCer3-TSSs-expresion-quintile4/2018-03-21 07:56 -  
[DIR]sacCer3-TSSs-expresion-quintile5/2018-03-21 07:56 -  
[DIR]sacCer3-TSSs/2018-03-21 07:52 -  
[ ]signalAround.lin_all.nucpos.L135-S_cerevisiae_SMAC_CpC_CpG_N6mA.50bp-smooth2018-03-21 07:56 20K 
[ ]test.bed2018-03-21 07:56 427  
[ ]test.top_exp_genes2018-03-21 07:56 266  
[ ]test.top_exp_genes.bed2018-03-21 07:56 1.4K 
[ ]z2018-03-21 07:56 7.3M 
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