#!/bin/bash
#SBATCH --job-name=zAMEt-99
#SBATCH --output=zAMEt.99.out
#SBATCH --error=zAMEt.99.err
#SBATCH --time=24:00:00
#SBATCH -p akundaje,normal,owners
#SBATCH --cpus-per-task=1
#SBATCH --mem=20000
~/programs/meme-5.0.5/meme/bin/ame --control ../limbDnaseHotspotAllBulkAndSCTSSGood.fa -o AME-HOCOMOCOv10_MOUSE_mono_meme_format-limbDnaseHotspotAllBulkAndSCTSSGoodEpithelial.0.2 ../limbDnaseHotspotAllBulkAndSCTSSGoodEpithelial.0.2.fa ~/programs/meme_4.11.2/motif_databases/MOUSE/HOCOMOCOv10_MOUSE_mono_meme_format.meme