rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0439_1.02 Zic2 CNCNGBRGGN 3.18e-16 2.32e-11 1.67e-8 73034 994 994 171468 1.2 335 33.70 38411 22.40 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0394_1.02 Plagl1 NDGGGGCCMN 2.22e-13 1.60e-8 1.15e-5 72148 994 994 171468 1.26 386 38.83 48177 28.10 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0441_1.02 Zic3 CNCHGSRGGN 1.36e-12 1.03e-7 7.41e-5 75732 994 994 171468 1.44 154 15.49 14733 8.59 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1552_1.02 Sp110 NNNAGGGVN 1.36e-12 1.37e-7 9.80e-5 100587 994 994 171468 1.43 355 35.71 43906 25.61 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0412_1.02 Zic1 CNCMRCRGGN 2.11e-12 1.59e-7 1.14e-4 75224 994 994 171468 1.49 176 17.71 17760 10.36 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5209_1.02 (Sp5)_(Drosophila_melanogaster)_(DBD_0.93) GKGGGCGKRKC 5.78e-11 2.60e-6 1.87e-3 45031 994 994 171468 2.99 164 16.50 16861 9.83 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6325_1.02 (Klf6)_(Homo_sapiens)_(DBD_1.00) GGGGGCKG 4.21e-11 3.02e-6 2.17e-3 71605 994 994 171468 2.84 199 20.02 21653 12.63 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0404_1.02 Zfp202 NNNKGGGGSV 4.73e-11 3.71e-6 2.66e-3 78339 994 994 171468 1.47 278 27.97 33242 19.39 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5965_1.02 (Zic4)_(Homo_sapiens)_(DBD_0.97) DCDCMGCGGGGGGYC 5.73e-10 1.47e-5 1.05e-2 25584 994 994 171468 1.06 213 21.43 24368 14.21 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0405_1.02 Klf7 DGGGCGKGGY 3.52e-10 2.23e-5 1.60e-2 63410 994 994 171468 2.32 190 19.11 20928 12.21 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0422_1.02 Zic5 SYRGGGGGTM 3.67e-10 2.26e-5 1.62e-2 61688 994 994 171468 1.07 415 41.75 55461 32.34 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0417_1.02 Egr1 NGMGKGGGYG 3.68e-10 2.53e-5 1.81e-2 68768 994 994 171468 1.01 492 49.50 68178 39.76 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0406_1.02 Zbtb7b NNRGGGGKCN 6.00e-10 3.95e-5 2.83e-2 65740 994 994 171468 1.19 383 38.53 50487 29.44 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0084_1.02 Tcfap2c HSCCBSAGGS 6.20e-10 4.00e-5 2.87e-2 64598 994 994 171468 1.52 298 29.98 37131 21.65 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0082_1.02 Tcfap2a HGCCBBVGGS 7.65e-10 5.29e-5 3.80e-2 69165 994 994 171468 1.83 226 22.74 26354 15.37 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4612_1.02 (Ctcfl)_(Homo_sapiens)_(DBD_0.81) CCRSCAGGGGGCGCY 2.18e-9 6.87e-5 4.93e-2 31462 994 994 171468 2.96 156 15.69 16622 9.69 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1871_1.02 Klf4 DGGGYGKGGC 1.10e-9 6.89e-5 4.95e-2 62685 994 994 171468 3.24 237 23.84 28091 16.38 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0443_1.02 Klf12 DGGGYGKGKY 1.25e-9 7.55e-5 5.42e-2 60197 994 994 171468 2.2 179 18.01 19704 11.49 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1419_1.02 Gm98 YSGTRCCABS 7.91e-9 1.13e-4 8.14e-2 14338 994 994 171468 1 136 13.68 14182 8.27 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0421_1.02 Klf8 NGGGYGKGKN 2.00e-9 1.55e-4 1.11e-1 77395 994 994 171468 1.97 174 17.51 19120 11.15 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6127_1.02 Klf2 DGGGYGKGGYB 1.11e-8 7.24e-4 5.20e-1 65163 994 994 171468 5.5 161 16.20 17742 10.35 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0812_1.02 Gcm1 NATRCGGGY 2.81e-8 1.28e-3 9.21e-1 45651 994 994 171468 1.12 253 25.45 31589 18.42 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6420_1.02 (Plag1)_(Homo_sapiens)_(DBD_0.96) GGRGGSMHNWVKAGGGG 2.26e-8 1.32e-3 9.51e-1 58753 994 994 171468 1.32 373 37.53 50359 29.37 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0414_1.02 Egr3 RCGTGGGYGD 2.73e-8 1.64e-3 1.17e0 59908 994 994 171468 1.89 166 16.70 18701 10.91 25 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2391_1.02 (Klf5)_(Homo_sapiens)_(DBD_0.95) DGGGHGGGGC 2.53e-8 1.92e-3 1.38e0 75910 994 994 171468 6.45 223 22.43 27020 15.76 26 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2314_1.02 (Sp2)_(Homo_sapiens)_(DBD_1.00) SSSVRGRGGCGGGRC 2.83e-8 1.94e-3 1.40e0 68732 994 994 171468 1.32 444 44.67 62080 36.21 27 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0083_1.02 Tcfap2b TNSCCYSAGG 5.84e-8 3.31e-3 2.38e0 56807 994 994 171468 1.42 300 30.18 39141 22.83 28 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0397_1.02 Zfp263 GGGAGSAC 7.69e-8 5.10e-3 3.66e0 66482 994 994 171468 1.1 410 41.25 56932 33.20 29 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0085_1.02 Tcfap2e THGCCYSVGG 8.96e-8 5.59e-3 4.01e0 62489 994 994 171468 1.22 362 36.42 49189 28.69 30 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2294_1.02 Klf1 WGGGTGTGGYH 1.23e-7 7.01e-3 5.03e0 57384 994 994 171468 1.77 284 28.57 36938 21.54 31 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1922_1.02 Ets1 VRVRCAGGAAGTGGN 1.17e-7 9.71e-3 6.97e0 83147 994 994 171468 44.8 40 4.02 2668 1.56 # AME (Analysis of Motif Enrichment): Version 5.0.5 compiled on Mar 31 2019 at 02:23:12 # The format of this file is described at http://meme-suite.org//doc/ame-output-format.html. # ame --control ../limbDnaseHotspotAllBulkAndSCTSSGood.fa -o AME-CISBP_Mus_musculus-limbDnaseHotspotAllBulkAndSCTSSGoodEMP.0.4 ../limbDnaseHotspotAllBulkAndSCTSSGoodEMP.0.4.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme