rank	motif_DB	motif_ID	motif_alt_ID	consensus	p-value	adj_p-value	E-value	tests	FASTA_max	pos	neg	PWM_min	TP	%TP	FP	%FP
1	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2317_1.02	Tcf12	RACAGCTGSNV	2.97e-13	1.41e-10	1.01e-7	475	137	137	1096	1.83	71	51.82	234	21.35
2	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0178_1.02	Ascl2	NVCAGCTGBN	3.82e-13	2.65e-10	1.90e-7	692	137	137	1096	3.05	46	33.58	100	9.12
3	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0195_1.02	Msc	DMCAKMTGKH	6.81e-13	3.19e-10	2.29e-7	468	137	137	1096	1.38	57	41.61	157	14.32
4	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2300_1.02	Myog	RRCAGCTGSNV	6.96e-13	3.26e-10	2.34e-7	469	137	137	1096	2.19	66	48.18	208	18.98
5	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6136_1.02	Bcl6	RRRDRRVVRRRRRRRRGGAAGWVWKGRARA	1.21e-12	7.73e-10	5.55e-7	639	137	137	1096	4.95	69	50.36	229	20.89
6	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2299_1.02	Myod1	NRNRRCAGCTGSN	1.81e-12	8.70e-10	6.24e-7	481	137	137	1096	1.38	80	58.39	303	27.65
7	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2318_1.02	Tcf3	SMCAGCTGCHB	3.25e-12	1.72e-9	1.24e-6	531	137	137	1096	7.19	38	27.74	72	6.57
8	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2314_1.02	(Sp2)_(Homo_sapiens)_(DBD_1.00)	SSVVRGRGGCGGGRC	1.50e-10	6.03e-8	4.33e-5	403	137	137	1096	8.48	31	22.63	55	5.02
9	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6482_1.02	(Sp3)_(Homo_sapiens)_(DBD_0.97)	VGVVGGGGGCGGGGCBRGSS	2.65e-10	1.12e-7	8.08e-5	425	137	137	1096	9.13	34	24.82	69	6.30
10	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2274_1.02	Egr2	GKGYGTGGGYGKRDS	4.83e-10	1.37e-7	9.84e-5	284	137	137	1096	2.44	42	30.66	108	9.85
11	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6535_1.02	(Wt1)_(Homo_sapiens)_(DBD_0.99)	GMGGGGGCGKGGG	8.89e-10	3.17e-7	2.27e-4	356	137	137	1096	4.85	36	26.28	82	7.48
12	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0176_1.02	Tcfap4	MCAKMTGDY	7.74e-10	5.20e-7	3.73e-4	672	137	137	1096	2.06	42	30.66	110	10.04
13	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2391_1.02	(Klf5)_(Homo_sapiens)_(DBD_0.95)	DGGGHGGGGC	1.10e-9	5.38e-7	3.86e-4	489	137	137	1096	6.55	31	22.63	61	5.57
14	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4971_1.02	(Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89)	GTVACAGVTG	1.46e-9	6.78e-7	4.87e-4	466	137	137	1096	1.6	62	45.26	226	20.62
15	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0214_1.02	Tcf21	AACAKMTGK	2.66e-9	7.68e-7	5.52e-4	289	137	137	1096	1.14	56	40.88	193	17.61
16	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0177_1.02	Twist2	NMCATATGTN	5.49e-9	1.11e-6	7.96e-4	202	137	137	1096	1.09	46	33.58	140	12.77
17	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0216_1.02	Nhlh2	NGCAGCTGYN	5.63e-9	3.13e-6	2.24e-3	555	137	137	1096	1.93	60	43.80	222	20.26
18	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0209_1.02	Myf6	NCANCTGWY	4.00e-9	3.28e-6	2.36e-3	822	137	137	1096	1.4	69	50.36	278	25.36
19	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6552_1.02	(Zfp148)_(Homo_sapiens)_(DBD_1.00)	KGVGKGGGGGAGGGG	1.60e-8	7.17e-6	5.15e-3	449	137	137	1096	22.6	26	18.98	49	4.47
20	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6123_1.02	Zfp281	GRGKTGGGGGAGGGG	2.07e-8	7.88e-6	5.66e-3	381	137	137	1096	58.6	21	15.33	31	2.83
21	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0219_1.02	Tcf4	VCAGGTGBN	2.97e-8	2.05e-5	1.47e-2	688	137	137	1096	1.09	100	72.99	531	48.45
22	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2271_1.02	E2f3	SDSYGVGGGCGGGAR	9.55e-8	2.71e-5	1.95e-2	284	137	137	1096	1.07	57	41.61	222	20.26
23	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0215_1.02	Hes5	VVCACGTGBB	2.09e-7	2.84e-5	2.04e-2	136	137	137	1096	1.31	22	16.06	41	3.74
24	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0183_1.02	Hey2	GNCACGTGY	2.60e-7	2.99e-5	2.15e-2	115	137	137	1096	1.06	29	21.17	72	6.57
25	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6358_1.02	(Neurod1)_(Homo_sapiens)_(DBD_1.00)	SGGCAGRTGKSC	6.48e-8	3.01e-5	2.16e-2	465	137	137	1096	1.69	59	43.07	232	21.17
26	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5209_1.02	(Sp5)_(Drosophila_melanogaster)_(DBD_0.93)	GKGGGCGKRKC	2.32e-7	5.89e-5	4.23e-2	254	137	137	1096	3.53	19	13.87	30	2.74
27	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5116_1.02	(Atoh8)_(Drosophila_melanogaster)_(DBD_0.70)	RCCACCTGK	1.27e-7	6.31e-5	4.53e-2	498	137	137	1096	1.05	83	60.58	406	37.04
28	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6554_1.02	(Zfp238)_(Homo_sapiens)_(DBD_1.00)	TCCAGATGTTBVSS	3.88e-7	7.06e-5	5.07e-2	182	137	137	1096	9.55	16	11.68	21	1.92
29	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0200_1.02	Clock	NVCACGTGBN	4.49e-7	8.90e-5	6.39e-2	198	137	137	1096	1.05	40	29.20	131	11.95
30	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4599_1.02	(E2f6)_(Homo_sapiens)_(DBD_0.98)	NRGGCGGGARR	2.79e-7	1.05e-4	7.56e-2	378	137	137	1096	1.75	50	36.50	186	16.97
31	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6122_1.02	Sfpi1	ARAAAGAGGAAGTGR	3.03e-7	1.73e-4	1.24e-1	572	137	137	1096	2.04	67	48.91	297	27.10
32	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1964_1.02	Myc	CCAYGTGSTY	1.59e-6	2.89e-4	2.07e-1	182	137	137	1096	1.72	29	21.17	80	7.30
33	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0405_1.02	Klf7	DGGGCGKGGY	6.86e-7	3.02e-4	2.17e-1	441	137	137	1096	2.11	30	21.90	81	7.39
34	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0196_1.02	Npas2	NSCACGTGTN	2.40e-6	3.09e-4	2.22e-1	129	137	137	1096	1.09	30	21.90	87	7.94
35	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0443_1.02	Klf12	DGGGYGKGKY	9.33e-7	3.79e-4	2.72e-1	406	137	137	1096	2.81	16	11.68	23	2.10
36	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5653_1.02	(Neurog2)_(Homo_sapiens)_(DBD_1.00)	RRCATATGTY	2.61e-6	3.86e-4	2.77e-1	148	137	137	1096	1.1	33	24.09	103	9.40
37	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0217_1.02	Neurog1	DCCATATGKB	1.35e-6	4.24e-4	3.04e-1	315	137	137	1096	1.42	35	25.55	110	10.04
38	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5593_1.02	(Klf16)_(Homo_sapiens)_(DBD_0.92)	GGGGGCGTGKC	1.12e-6	4.33e-4	3.11e-1	386	137	137	1096	3.11	35	25.55	109	9.95
39	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6201_1.02	(Egr4)_(Homo_sapiens)_(DBD_1.00)	GGSGGYRGGGM	1.59e-6	4.89e-4	3.51e-1	308	137	137	1096	3.94	29	21.17	80	7.30
40	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6321_1.02	(Klf15)_(Homo_sapiens)_(DBD_1.00)	RSMKGGGAGDKGGGGSS	1.24e-6	4.97e-4	3.57e-1	402	137	137	1096	4.92	33	24.09	99	9.03
41	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0218_1.02	Bhlha15	SCATATGT	2.13e-6	5.63e-4	4.05e-1	264	137	137	1096	1.14	48	35.04	188	17.15
42	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1265_1.02	Irf7	DAARCGAAAR	9.96e-7	6.72e-4	4.82e-1	675	137	137	1096	1.12	92	67.15	497	45.35
43	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0133_1.02	Phf21a	NNWATATWAATT	2.13e-6	6.89e-4	4.95e-1	323	137	137	1096	1.49	48	35.04	188	17.15
44	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5691_1.02	(Olig2)_(Homo_sapiens)_(DBD_1.00)	AMCATATGKT	4.54e-6	7.03e-4	5.05e-1	155	137	137	1096	1.02	35	25.55	117	10.68
45	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5856_1.02	(Sp8)_(Homo_sapiens)_(DBD_1.00)	RGKGGGCGTGGY	1.91e-6	7.54e-4	5.42e-1	395	137	137	1096	5.28	19	13.87	36	3.28
46	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0421_1.02	Klf8	NGGGYGKGKN	1.41e-6	7.88e-4	5.66e-1	560	137	137	1096	2.3	16	11.68	24	2.19
47	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0203_1.02	Figla	VCASSTGNN	1.68e-6	9.75e-4	7.00e-1	582	137	137	1096	1.72	62	45.26	277	25.27
48	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0175_1.02	Mnt	NNCACGTGN	8.07e-6	1.10e-3	7.88e-1	136	137	137	1096	1.26	22	16.06	54	4.93
49	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0437_1.02	Zfp637	TATRTATRT	3.88e-6	1.35e-3	9.69e-1	348	137	137	1096	1.15	50	36.50	205	18.70
50	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6125_1.02	Ctcf	CCASHAGRKGGCRSY	5.16e-6	1.43e-3	1.03e0	277	137	137	1096	14.3	13	9.49	17	1.55
51	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1871_1.02	Klf4	DGGGYGKGGC	3.82e-6	1.45e-3	1.04e0	380	137	137	1096	4.58	22	16.06	51	4.65
52	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0687_1.02	Elf3	WNVMGGAARW	2.88e-6	2.18e-3	1.57e0	759	137	137	1096	1.29	70	51.09	338	30.84
53	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4850_1.02	(Tcf15)_(Drosophila_melanogaster)_(DBD_0.70)	TKTWRTNKBBDYDMCATSTGK	1.23e-5	3.65e-3	2.62e0	298	137	137	1096	7.21	13	9.49	19	1.73
54	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0191_1.02	Hes1	NVCACGYGNN	4.06e-5	3.93e-3	2.83e0	97	137	137	1096	1.58	9	6.57	9	0.82
55	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0199_1.02	Hes2	NNNNGRCACGTGM	1.98e-5	4.34e-3	3.12e0	220	137	137	1096	1.02	43	31.39	174	15.88
56	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1879_1.02	Foxa2	VCWRWGTAAACA	1.48e-5	4.38e-3	3.14e0	297	137	137	1096	7.18	14	10.22	23	2.10
57	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4536_1.02	(E2f1)_(Homo_sapiens)_(DBD_0.98)	VRRVRGVGCGCGCRS	2.45e-5	4.74e-3	3.41e0	194	137	137	1096	6.81	11	8.03	14	1.28
58	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6336_1.02	(Maz)_(Homo_sapiens)_(DBD_0.98)	RGGGDRGGGAGGGRGGG	9.93e-6	4.92e-3	3.53e0	497	137	137	1096	3.71	51	37.23	219	19.98
59	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1927_1.02	Mycn	RCCACGTG	4.49e-5	5.95e-3	4.27e0	133	137	137	1096	1.91	18	13.14	43	3.92
60	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6212_1.02	(Hif3a)_(Homo_sapiens)_(DBD_0.74)	CMCACGYAYDCAC	3.07e-5	5.96e-3	4.28e0	195	137	137	1096	1.06	39	28.47	153	13.96
61	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2283_1.02	(Foxp4)_(Homo_sapiens)_(DBD_0.87)	HWWADGTAAACAAAR	1.65e-5	6.31e-3	4.53e0	383	137	137	1096	2.11	45	32.85	185	16.88
62	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5446_1.02	(Foxd1)_(Homo_sapiens)_(DBD_0.99)	GTAAACA	1.77e-5	6.69e-3	4.80e0	378	137	137	1096	2.43	24	17.52	67	6.11
63	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6500_1.02	(Tal1)_(Homo_sapiens)_(DBD_1.00)	GACCATCTGTTS	3.99e-5	7.04e-3	5.05e0	177	137	137	1096	1.35	32	23.36	114	10.40
64	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0426_1.02	Zfp3	DGTGTGCGYNN	3.86e-5	7.47e-3	5.36e0	194	137	137	1096	1.42	25	18.25	76	6.93
65	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0131_1.02	Ahctf1	AAATAAAT	1.67e-5	8.60e-3	6.17e0	516	137	137	1096	1.51	62	45.26	298	27.19
66	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6127_1.02	Klf2	DGGGYGKGGYB	2.19e-5	8.64e-3	6.20e0	397	137	137	1096	4.33	25	18.25	73	6.66
67	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6135_1.02	Tbx2	RRACTACAWHTCCCAGRADGC	1.47e-4	1.05e-2	7.54e0	72	137	137	1096	314	4	2.92	0	0.00
68	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0747_1.02	Foxl1	WNNRTAAAYA	2.18e-5	1.08e-2	7.73e0	497	137	137	1096	2.9	24	17.52	68	6.20
69	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5627_1.02	(Mesp2)_(Homo_sapiens)_(DBD_0.98)	NVCAGGTGYD	1.91e-5	1.11e-2	7.99e0	585	137	137	1096	1.14	82	59.85	448	40.88
70	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6226_1.02	(Fev)_(Homo_sapiens)_(DBD_1.00)	CAGGAARTDA	4.03e-5	1.17e-2	8.37e0	291	137	137	1096	1.02	52	37.96	238	21.72
71	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1641_1.02	Tbp	WTAWAWN	2.60e-5	1.18e-2	8.49e0	458	137	137	1096	1.39	46	33.58	195	17.79
72	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0633_1.02	(Dmrt2)_(Homo_sapiens)_(DBD_1.00)	KAATKTATWN	4.88e-5	1.20e-2	8.60e0	247	137	137	1096	1.06	45	32.85	194	17.70
73	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0221_1.02	Max	NCRCGTGNN	5.15e-5	1.29e-2	9.29e0	253	137	137	1096	1.09	39	28.47	157	14.32

# AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28
# The format of this file is described at http://meme-suite.org/doc/ame-output-format.html.
# ame --control --shuffle-- -o AME-CISBP_Mus_musculus-limbDnaseHotspotAllBulkAndSCTSSGoodLateMuscle ../limbDnaseHotspotAllBulkAndSCTSSGoodLateMuscle.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme