rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0131_1.02 Ahctf1 AAATAAAT 5.49e-8 2.41e-5 1.73e-2 439 12 12 1008 5.15 4 33.33 1 0.10 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6279_1.02 (Hmga1)_(Homo_sapiens)_(DBD_1.00) AAAATWN 1.25e-6 4.76e-4 3.42e-1 382 12 12 1008 3.05 3 25.00 0 0.00 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0436_1.02 Zfp105 TTRTTKDHYN 1.25e-6 6.95e-4 4.99e-1 557 12 12 1008 4.88 3 25.00 0 0.00 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0132_1.02 Hmga2 NNNNRWWWWN 2.23e-6 9.06e-4 6.50e-1 406 12 12 1008 1.57 4 33.33 6 0.60 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6201_1.02 (Egr4)_(Homo_sapiens)_(DBD_1.00) GGSGGYRGGGM 3.84e-6 1.23e-3 8.84e-1 321 12 12 1008 2.26 9 75.00 141 13.99 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0426_1.02 Zfp3 DGTGTGCGYNN 4.96e-6 1.47e-3 1.06e0 297 12 12 1008 3.83 3 25.00 1 0.10 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0118_1.02 (Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40) NNNNDAAWT 4.96e-6 2.06e-3 1.48e0 415 12 12 1008 2.15 3 25.00 1 0.10 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0133_1.02 Phf21a NNWATATWAATT 1.04e-5 2.18e-3 1.56e0 210 12 12 1008 4.12 4 33.33 10 0.99 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6123_1.02 Zfp281 GRGKTGGGGGAGGGG 7.35e-6 3.13e-3 2.25e0 427 12 12 1008 2.5 10 83.33 208 20.63 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2283_1.02 (Foxp4)_(Homo_sapiens)_(DBD_0.87) HWWADGTAAACAAAR 1.23e-5 3.89e-3 2.80e0 317 12 12 1008 55.1 3 25.00 2 0.20 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0105_1.02 Arid3a NTTTDATHN 1.04e-5 4.00e-3 2.87e0 386 12 12 1008 1.93 4 33.33 10 0.99 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0437_1.02 Zfp637 TATRTATRT 2.76e-5 4.78e-3 3.43e0 174 12 12 1008 1.26 6 50.00 56 5.56 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0726_1.02 Foxj3 NRTAAACAWW 1.86e-5 5.96e-3 4.28e0 321 12 12 1008 3.9 4 33.33 12 1.19 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6552_1.02 (Zfp148)_(Homo_sapiens)_(DBD_1.00) KGVGKGGGGGAGGGG 1.23e-5 6.34e-3 4.56e0 517 12 12 1008 72 3 25.00 2 0.20 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6212_1.02 (Hif3a)_(Homo_sapiens)_(DBD_0.74) CMCACGYAYDCAC 2.45e-5 7.75e-3 5.56e0 318 12 12 1008 51.9 3 25.00 3 0.30 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6482_1.02 (Sp3)_(Homo_sapiens)_(DBD_0.97) VGVVGGGGGCGGGGCBRGSS 1.45e-5 7.81e-3 5.61e0 541 12 12 1008 4.91 7 58.33 80 7.94 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2314_1.02 (Sp2)_(Homo_sapiens)_(DBD_1.00) SSSVRGRGGCGGGRC 2.37e-5 1.13e-2 8.09e0 478 12 12 1008 6.87 5 41.67 30 2.98 # AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28 # The format of this file is described at http://meme-suite.org/doc/ame-output-format.html. # ame --control --shuffle-- -o AME-CISBP_Mus_musculus-mm10-refFlat-2014-10-26.TSS-500bp.YellowGreenGenes ../mm10-refFlat-2014-10-26.TSS-500bp.YellowGreenGenes.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme