rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0131_1.02 Ahctf1 AAATAAAT 5.09e-8 2.28e-5 1.63e-2 447 25 25 1025 7.9 8 32.00 19 1.85 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6123_1.02 Zfp281 GRGKKGGGGGAGGGG 4.36e-7 1.97e-4 1.42e-1 453 25 25 1025 7.08 13 52.00 106 10.34 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1582_1.02 Hmg20b NWAWATAATWN 1.47e-6 3.09e-4 2.22e-1 210 25 25 1025 3.28 11 44.00 78 7.61 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6336_1.02 (Maz)_(Homo_sapiens)_(DBD_0.98) RGGGRGGGGAGGGRGGG 5.55e-7 3.30e-4 2.37e-1 594 25 25 1025 1.62 23 92.00 442 43.12 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6321_1.02 (Klf15)_(Homo_sapiens)_(DBD_1.00) RSMKGGGAGDKGGGGSS 9.30e-7 4.58e-4 3.29e-1 493 25 25 1025 1.07 23 92.00 453 44.20 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0133_1.02 Phf21a NNWATATWAATT 1.58e-6 4.99e-4 3.58e-1 315 25 25 1025 3.55 12 48.00 98 9.56 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5593_1.02 (Klf16)_(Homo_sapiens)_(DBD_0.92) GGGGGCGTGKC 1.34e-6 5.07e-4 3.64e-1 378 25 25 1025 3.48 10 40.00 60 5.85 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6399_1.02 (Onecut2)_(Homo_sapiens)_(DBD_1.00) DKSWTKWTATKGATTTTWYYT 5.04e-6 6.95e-4 4.99e-1 138 25 25 1025 7.95 7 28.00 26 2.54 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2314_1.02 (Sp2)_(Homo_sapiens)_(DBD_1.00) SSSVRGRGGCGGGRC 2.02e-6 1.13e-3 8.10e-1 560 25 25 1025 4.45 13 52.00 122 11.90 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0737_1.02 Foxb1 WRWGTAAAYA 4.46e-6 1.72e-3 1.24e0 387 25 25 1025 1.65 16 64.00 211 20.59 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6239_1.02 (Foxf2)_(Homo_sapiens)_(DBD_1.00) HWADGTAAACA 7.45e-6 2.16e-3 1.55e0 290 25 25 1025 10.7 6 24.00 17 1.66 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6552_1.02 (Zfp148)_(Homo_sapiens)_(DBD_1.00) KGVGKGGGGGAGGGG 5.02e-6 2.80e-3 2.01e0 559 25 25 1025 7.98 12 48.00 110 10.73 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0732_1.02 Foxc2 WRNRTMAAYA 6.67e-6 2.93e-3 2.11e0 440 25 25 1025 2.71 11 44.00 92 8.98 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0747_1.02 Foxl1 NNNRTAAAYA 8.14e-6 3.24e-3 2.33e0 399 25 25 1025 3.97 9 36.00 57 5.56 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6136_1.02 Bcl6 RRRDRRVVRRRRRRRRGGAAGWVWKGRARA 7.14e-6 3.64e-3 2.62e0 511 25 25 1025 4.78 17 68.00 250 24.39 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1882_1.02 (Irf1)_(Homo_sapiens)_(DBD_1.00) RAAVNGAAAGTGAAASYRRRN 1.60e-5 3.76e-3 2.70e0 235 25 25 1025 2.11 13 52.00 148 14.44 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0746_1.02 Gm5294 NNTRTAAACAHN 1.29e-5 4.30e-3 3.09e0 334 25 25 1025 9.57 5 20.00 10 0.98 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5209_1.02 (Sp5)_(Drosophila_melanogaster)_(DBD_0.93) GKGGGCGKRKC 1.39e-5 4.34e-3 3.12e0 314 25 25 1025 1.29 15 60.00 200 19.51 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2283_1.02 (Foxp4)_(Homo_sapiens)_(DBD_0.87) MWWADGTAAACAAAR 1.57e-5 4.81e-3 3.45e0 308 25 25 1025 1.86 15 60.00 202 19.71 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6166_1.02 (Cdc5l)_(Homo_sapiens)_(DBD_1.00) RWTAYRTTAAMWCVC 2.77e-5 5.02e-3 3.61e0 182 25 25 1025 4.86 7 28.00 35 3.41 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6236_1.02 (Foxs1)_(Homo_sapiens)_(DBD_0.78) YCTRDSWAAACAAAC 3.50e-5 5.59e-3 4.01e0 160 25 25 1025 14.1 5 20.00 13 1.27 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6456_1.02 (Rreb1)_(Homo_sapiens)_(DBD_0.99) DKGKKKGKGGKTGKTTKGGGKT 3.50e-5 6.18e-3 4.44e0 177 25 25 1025 15.8 5 20.00 13 1.27 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2391_1.02 (Klf5)_(Homo_sapiens)_(DBD_0.95) DGGGHGGGGC 1.34e-5 7.45e-3 5.35e0 558 25 25 1025 1.05 23 92.00 515 50.24 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1965_1.02 (Foxa1)_(Homo_sapiens)_(DBD_1.00) HWRWGTAAACANVNN 3.25e-5 8.23e-3 5.91e0 254 25 25 1025 7.21 7 28.00 36 3.51 25 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0183_1.02 Hey2 GNCACGTGY 7.40e-5 8.92e-3 6.40e0 121 25 25 1025 3.19 4 16.00 7 0.68 26 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6127_1.02 Klf2 DGGGYGKGGCB 2.18e-5 9.24e-3 6.64e0 426 25 25 1025 1.85 14 56.00 179 17.46 27 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0633_1.02 (Dmrt2)_(Homo_sapiens)_(DBD_1.00) KAATKTATHN 4.15e-5 9.33e-3 6.70e0 226 25 25 1025 1.46 13 52.00 162 15.80 28 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0411_1.02 Zfp300 NNYNRTGTATAMNNN 2.80e-5 9.39e-3 6.74e0 337 25 25 1025 1.03 18 72.00 311 30.34 29 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6241_1.02 (Foxn3)_(Homo_sapiens)_(DBD_0.45) WAAAYAAACA 3.50e-5 1.03e-2 7.38e0 295 25 25 1025 16.2 5 20.00 13 1.27 30 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6122_1.02 Sfpi1 ARAAAGAGGAAGTGR 2.14e-5 1.05e-2 7.55e0 494 25 25 1025 1.35 20 80.00 383 37.37 31 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6535_1.02 (Wt1)_(Homo_sapiens)_(DBD_0.99) GMGGGGGCGKGGG 2.55e-5 1.17e-2 8.43e0 464 25 25 1025 1.21 20 80.00 387 37.76 32 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0734_1.02 Foxc1 WRNRTMAAYA 2.65e-5 1.20e-2 8.59e0 454 25 25 1025 2.6 10 40.00 86 8.39 33 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1265_1.02 Irf7 DAARCGAAAR 2.05e-5 1.22e-2 8.76e0 599 25 25 1025 3.78 6 24.00 21 2.05 34 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5856_1.02 (Sp8)_(Homo_sapiens)_(DBD_1.00) RGKGGGCGTGGY 3.92e-5 1.37e-2 9.84e0 352 25 25 1025 3.72 6 24.00 24 2.34 # AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28 # The format of this file is described at http://meme-suite.org/doc/ame-output-format.html. # ame --control --shuffle-- -o AME-CISBP_Mus_musculus-mm10-refFlat-2014-10-26.TSS-500bp.Redgenes_Loose ../mm10-refFlat-2014-10-26.TSS-500bp.Redgenes_Loose.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme