rank	motif_DB	motif_ID	motif_alt_ID	consensus	p-value	adj_p-value	E-value	tests	FASTA_max	pos	neg	PWM_min	TP	%TP	FP	%FP
1	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1890_1.02	(Nfya)_(Homo_sapiens)_(DBD_1.00)	AGVSYKCTGATTGGTBSR	3.37e-10	4.98e-8	3.58e-5	148	22	22	1012	6.58	10	45.45	26	2.57
2	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5209_1.02	(Sp5)_(Drosophila_melanogaster)_(DBD_0.93)	GKGGGCGKRKC	2.08e-10	8.25e-8	5.92e-5	397	22	22	1012	3.58	15	68.18	101	9.98
3	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2274_1.02	Egr2	GKGYGTGGGYGKRDS	2.18e-10	8.75e-8	6.28e-5	402	22	22	1012	17	7	31.82	4	0.40
4	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4527_1.02	(Smarcc2)_(Homo_sapiens)_(DBD_1.00)	RRACTACAAYTCCCAGVAKGC	2.70e-9	1.51e-7	1.09e-4	56	22	22	1012	3.17e+05	5	22.73	0	0.00
5	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6135_1.02	Tbx2	RRACTACAWHTCCCAGVADGC	2.70e-9	1.89e-7	1.36e-4	70	22	22	1012	6.08e+05	5	22.73	0	0.00
6	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4484_1.02	(Zfp143)_(Homo_sapiens)_(DBD_0.97)	CTGGGARTTGTAGTY	2.70e-9	2.67e-7	1.92e-4	99	22	22	1012	3.12e+03	5	22.73	0	0.00
7	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6270_1.02	(Nhlh1)_(Homo_sapiens)_(DBD_1.00)	RRGGMCGCAGCTGMKMCCCV	2.97e-9	4.10e-7	2.95e-4	138	22	22	1012	6.58	9	40.91	23	2.27
8	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2299_1.02	Myod1	NRNRRCAGCTGSN	1.10e-9	4.28e-7	3.07e-4	388	22	22	1012	11.8	7	31.82	6	0.59
9	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0421_1.02	Klf8	NGGGYGKGKN	9.66e-10	6.20e-7	4.45e-4	642	22	22	1012	1.64	16	72.73	138	13.64
10	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0443_1.02	Klf12	DGGGCGKGKY	2.14e-9	1.14e-6	8.21e-4	535	22	22	1012	2.26	13	59.09	78	7.71
11	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4473_1.02	(Pbx3)_(Homo_sapiens)_(DBD_1.00)	NBCDGCCAATSRGVR	4.14e-9	1.32e-6	9.44e-4	318	22	22	1012	4.96	8	36.36	15	1.48
12	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4549_1.02	(Nr2c2)_(Homo_sapiens)_(DBD_0.99)	WBYRCTTCCGGGKCR	8.90e-9	1.60e-6	1.15e-3	180	22	22	1012	8.26	8	36.36	17	1.68
13	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2271_1.02	E2f3	SDSYGVGGGCGGGAR	1.78e-8	6.54e-6	4.70e-3	367	22	22	1012	9.66	8	36.36	19	1.88
14	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2300_1.02	Myog	RRCAGCTGSNV	1.92e-8	7.09e-6	5.09e-3	370	22	22	1012	9.75	7	31.82	11	1.09
15	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6127_1.02	Klf2	DGGGYGKGGCB	2.80e-8	1.47e-5	1.05e-2	525	22	22	1012	2.82	16	72.73	175	17.29
16	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6482_1.02	(Sp3)_(Homo_sapiens)_(DBD_0.97)	VGVVGGGGGCGGGGCBRGSS	3.76e-8	1.83e-5	1.31e-2	486	22	22	1012	3.03	18	81.82	247	24.41
17	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5592_1.02	(Klf14)_(Homo_sapiens)_(DBD_0.96)	ARGKGGGCGTGGYM	9.29e-8	2.38e-5	1.71e-2	256	22	22	1012	2.96	11	50.00	68	6.72
18	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0316_1.02	Nfil3	NRTTACGYMA	1.45e-7	2.42e-5	1.74e-2	167	22	22	1012	2.38	5	22.73	3	0.30
19	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2317_1.02	Tcf12	RACAGCTGSNV	6.74e-8	2.43e-5	1.75e-2	361	22	22	1012	9.17	7	31.82	14	1.38
20	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6240_1.02	(Foxi1)_(Homo_sapiens)_(DBD_0.99)	RRCCAATCAVAR	1.54e-7	2.64e-5	1.90e-2	171	22	22	1012	142	4	18.18	0	0.00
21	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0178_1.02	Ascl2	NVCAGCTGBN	4.55e-8	2.73e-5	1.96e-2	601	22	22	1012	3.04	7	31.82	13	1.28
22	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4688_1.02	(Elf1)_(Homo_sapiens)_(DBD_1.00)	ACCCGGAAGY	1.54e-7	2.75e-5	1.97e-2	178	22	22	1012	60.7	4	18.18	0	0.00
23	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2318_1.02	Tcf3	SMCAGCTGCHB	7.53e-8	3.30e-5	2.37e-2	438	22	22	1012	3.26	13	59.09	107	10.57
24	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2294_1.02	Klf1	WGGGTGTGGYH	8.36e-8	3.40e-5	2.44e-2	407	22	22	1012	2.45	13	59.09	108	10.67
25	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5856_1.02	(Sp8)_(Homo_sapiens)_(DBD_1.00)	RGKGGGCGTGGY	7.50e-8	3.74e-5	2.69e-2	499	22	22	1012	1.24	21	95.45	403	39.82
26	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2298_1.02	Meis1	NVNDGASTGACAGSW	1.01e-7	3.81e-5	2.73e-2	376	22	22	1012	3.41	12	54.55	88	8.70
27	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0405_1.02	Klf7	DGGGCGKGGY	8.91e-8	4.81e-5	3.45e-2	540	22	22	1012	1.96	16	72.73	190	18.77
28	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5593_1.02	(Klf16)_(Homo_sapiens)_(DBD_0.92)	GGGGGCGTGKC	1.32e-7	6.09e-5	4.37e-2	463	22	22	1012	2.82	18	81.82	267	26.38
29	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4692_1.02	(Six5)_(Homo_sapiens)_(DBD_1.00)	ACTACAAYTC	6.24e-7	9.67e-5	6.94e-2	155	22	22	1012	2.95	10	45.45	64	6.32
30	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6466_1.02	(Smad4)_(Homo_sapiens)_(DBD_1.00)	TGTCTGBCY	1.98e-7	1.09e-4	7.79e-2	549	22	22	1012	4.53	6	27.27	9	0.89
31	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0414_1.02	Egr3	RCGTGGGYGD	3.23e-7	1.50e-4	1.08e-1	465	22	22	1012	1.2	19	86.36	326	32.21
32	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2391_1.02	(Klf5)_(Homo_sapiens)_(DBD_0.95)	DGGGHGGGGC	2.57e-7	1.50e-4	1.08e-1	584	22	22	1012	1.89	20	90.91	371	36.66
33	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6535_1.02	(Wt1)_(Homo_sapiens)_(DBD_0.99)	GMGGGGGCGKGGG	3.74e-7	1.56e-4	1.12e-1	418	22	22	1012	1.69	18	81.82	285	28.16
34	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1891_1.02	Gabpa	CCGGAAGTGVN	7.62e-7	2.00e-4	1.44e-1	263	22	22	1012	17.6	4	18.18	1	0.10
35	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6154_1.02	(Atf5)_(Homo_sapiens)_(DBD_0.98)	TAAGGRAGARGK	6.69e-7	2.63e-4	1.89e-1	393	22	22	1012	2.25	14	63.64	157	15.51
36	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0390_1.02	Zscan4	ATGTGCAC	1.15e-6	2.75e-4	1.98e-1	240	22	22	1012	5.7	5	22.73	6	0.59
37	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0696_1.02	Ehf	WNVMGGAART	7.62e-7	3.57e-4	2.56e-1	469	22	22	1012	3.73	4	18.18	1	0.10
38	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0392_1.02	Sp1	GGGGGCGKG	8.62e-7	3.73e-4	2.68e-1	433	22	22	1012	2.07	17	77.27	260	25.69
39	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4467_1.02	(Mef2c)_(Homo_sapiens)_(DBD_1.00)	NDKCYAAAAATAGMH	1.45e-6	4.05e-4	2.91e-1	279	22	22	1012	2.38	12	54.55	114	11.26
40	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1871_1.02	Klf4	DGGGYGKGGC	8.62e-7	4.28e-4	3.07e-1	496	22	22	1012	2.03	17	77.27	260	25.69
41	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6485_1.02	(Spib)_(Homo_sapiens)_(DBD_0.99)	ARAAASMGGAAS	2.09e-6	7.49e-4	5.38e-1	359	22	22	1012	1.26	17	77.27	276	27.27
42	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6337_1.02	(Mbd2)_(Homo_sapiens)_(DBD_0.99)	SSGKCCGGMGR	2.68e-6	8.55e-4	6.14e-1	319	22	22	1012	6.18	6	27.27	16	1.58
43	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0216_1.02	Nhlh2	NGCAGCTGYN	2.25e-6	1.01e-3	7.23e-1	447	22	22	1012	5.22	4	18.18	2	0.20
44	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4466_1.02	(Mef2a)_(Homo_sapiens)_(DBD_1.00)	NDKCYAAAAATAGMH	4.35e-6	1.15e-3	8.25e-1	264	22	22	1012	2.01	12	54.55	127	12.55
45	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4680_1.02	(Bach2)_(Homo_sapiens)_(DBD_0.72)	GTCACGTG	6.32e-6	1.18e-3	8.49e-1	187	22	22	1012	2.35	9	40.91	64	6.32
46	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0317_1.02	Dbp	NVTTAYRYAA	5.18e-6	1.39e-3	1.00e0	269	22	22	1012	2.27	4	18.18	3	0.30
47	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6121_1.02	Pou5f1	TTTRCATDWVAAARR	5.95e-6	1.95e-3	1.40e0	328	22	22	1012	4.27	11	50.00	106	10.47
48	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0708_1.02	Elf2	DNSCGGAARY	5.18e-6	2.42e-3	1.74e0	467	22	22	1012	2.33	4	18.18	3	0.30
49	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1061_1.02	Tgif2	NNCTGTCANN	5.18e-6	2.55e-3	1.83e0	493	22	22	1012	3	4	18.18	3	0.30
50	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0301_1.02	Fosl2	GATGACGY	2.58e-5	3.71e-3	2.67e0	144	22	22	1012	3.62	5	22.73	14	1.38
51	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0219_1.02	Tcf4	VCAGGTGBN	6.57e-6	4.01e-3	2.88e0	612	22	22	1012	1.16	20	90.91	443	43.77
52	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5697_1.02	(Onecut3)_(Homo_sapiens)_(DBD_0.98)	DTTATYGATTTTTY	4.11e-5	4.26e-3	3.06e0	104	22	22	1012	4.61	6	27.27	28	2.77
53	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6402_1.02	(Ovol1)_(Homo_sapiens)_(DBD_0.94)	KGTAACKGT	2.32e-5	4.74e-3	3.40e0	205	22	22	1012	1.22	12	54.55	150	14.82
54	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4453_1.02	(Bcl11a)_(Homo_sapiens)_(DBD_1.00)	ADGRGGAASTGARAV	1.31e-5	5.02e-3	3.61e0	383	22	22	1012	1.2	17	77.27	313	30.93
55	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1582_1.02	Hmg20b	NWAWATAATWN	3.40e-5	5.29e-3	3.80e0	156	22	22	1012	4.98	5	22.73	15	1.48
56	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6285_1.02	(Onecut1)_(Homo_sapiens)_(DBD_1.00)	WWTATTGATTTWDH	3.10e-5	5.72e-3	4.11e0	185	22	22	1012	2.31	9	40.91	79	7.81
57	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0448_1.02	(Ovol2)_(Caenorhabditis_elegans)_(DBD_0.70)	VTAACGGD	6.81e-5	6.59e-3	4.73e0	97	22	22	1012	2.61	6	27.27	31	3.06
58	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5627_1.02	(Mesp2)_(Homo_sapiens)_(DBD_0.98)	NVCAGGTGYD	1.41e-5	6.92e-3	4.97e0	491	22	22	1012	4.47	5	22.73	12	1.19
59	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0437_1.02	Zfp637	TATRTATRT	3.79e-5	7.84e-3	5.63e0	208	22	22	1012	1.01	13	59.09	188	18.58
60	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2314_1.02	(Sp2)_(Homo_sapiens)_(DBD_1.00)	SSSVRGRGGCGGGRC	1.77e-5	8.52e-3	6.12e0	484	22	22	1012	1.19	19	86.36	413	40.81
61	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4639_1.02	(Yy1)_(Homo_sapiens)_(DBD_1.00)	VNCCAAGATGGCGGC	6.83e-5	8.64e-3	6.20e0	127	22	22	1012	10.9	4	18.18	8	0.79
62	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6542_1.02	(Zbtb6)_(Homo_sapiens)_(DBD_1.00)	VGRTGATRGAGCC	4.45e-5	8.64e-3	6.20e0	195	22	22	1012	1.35	11	50.00	132	13.04
63	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6553_1.02	(Zfp219)_(Homo_sapiens)_(DBD_1.00)	GDGGGGGGYGGA	1.92e-5	9.25e-3	6.64e0	485	22	22	1012	1.28	19	86.36	415	41.01
64	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4599_1.02	(E2f6)_(Homo_sapiens)_(DBD_0.98)	NRGGCGGGARR	2.48e-5	1.07e-2	7.67e0	433	22	22	1012	2.88	10	45.45	99	9.78
65	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2065_1.02	(Esr2)_(Homo_sapiens)_(DBD_1.00)	RGGKCANBSTGACCT	3.38e-5	1.15e-2	8.27e0	343	22	22	1012	1.75	13	59.09	186	18.38
66	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6226_1.02	(Fev)_(Homo_sapiens)_(DBD_1.00)	CAGGAARTDA	4.76e-5	1.23e-2	8.84e0	260	22	22	1012	1.84	11	50.00	133	13.14
67	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0812_1.02	Gcm1	NATRCGGGY	2.98e-5	1.30e-2	9.34e0	439	22	22	1012	1.66	4	18.18	6	0.59

# AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28
# The format of this file is described at http://meme-suite.org/doc/ame-output-format.html.
# ame --control --shuffle-- -o AME-CISBP_Mus_musculus-gencode.vM4.annotation.TSS-500bp.OrangeGenes ../gencode.vM4.annotation.TSS-500bp.OrangeGenes.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme