rank	motif_DB	motif_ID	motif_alt_ID	consensus	p-value	adj_p-value	E-value	tests	FASTA_max	pos	neg	PWM_min	TP	%TP	FP	%FP
1	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0721_1.02	Foxj2	RTMAACANN	7.92e-12	4.55e-9	3.27e-6	574	32	32	1024	1.96	14	43.75	35	3.42
2	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0730_1.02	Foxo4	NNRWMAACAN	6.41e-11	3.59e-8	2.57e-5	559	32	32	1024	2.62	9	28.12	7	0.68
3	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0436_1.02	Zfp105	TTRTTKDHYN	9.26e-11	6.03e-8	4.33e-5	651	32	32	1024	3.83	7	21.88	1	0.10
4	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2283_1.02	(Foxp4)_(Homo_sapiens)_(DBD_0.87)	HWWADGTAAACAAAR	9.97e-10	4.79e-7	3.44e-4	480	32	32	1024	2.8	23	71.88	207	20.21
5	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0726_1.02	Foxj3	NRTAAACAWW	2.89e-9	1.36e-6	9.78e-4	472	32	32	1024	4.8	10	31.25	20	1.95
6	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6244_1.02	(Foxm1)_(Homo_sapiens)_(DBD_0.99)	RWAAWCAMWCAAV	3.27e-9	1.87e-6	1.35e-3	573	32	32	1024	36.3	6	18.75	1	0.10
7	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0723_1.02	Foxg1	NNRWMAAYAN	3.65e-9	2.12e-6	1.52e-3	579	32	32	1024	1.69	12	37.50	38	3.71
8	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1265_1.02	Irf7	DAARCGAAAR	3.63e-9	2.82e-6	2.03e-3	779	32	32	1024	1.96	24	75.00	246	24.02
9	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0756_1.02	(ENSMUSG00000090020)_(Strongylocentrotus_purpuratus)_(DBD_0.44)	NNHMACANN	1.14e-8	6.38e-6	4.58e-3	562	32	32	1024	1.33	13	40.62	54	5.27
10	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0746_1.02	Gm5294	NNTRTAAACAHN	1.51e-8	6.51e-6	4.67e-3	432	32	32	1024	2.74	15	46.88	82	8.01
11	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0728_1.02	Foxj1	NRTAAACAAANN	1.28e-8	6.54e-6	4.70e-3	511	32	32	1024	19.6	6	18.75	2	0.20
12	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6241_1.02	(Foxn3)_(Homo_sapiens)_(DBD_0.45)	WAAAYAAACA	2.77e-8	1.09e-5	7.86e-3	395	32	32	1024	16	8	25.00	12	1.17
13	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6365_1.02	(Nfatc4)_(Homo_sapiens)_(DBD_0.99)	WADTTTTCCH	2.35e-8	1.69e-5	1.21e-2	720	32	32	1024	5.19	15	46.88	85	8.30
14	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6166_1.02	(Cdc5l)_(Homo_sapiens)_(DBD_1.00)	RWTAYRTTAAMWCVC	1.35e-7	2.80e-5	2.01e-2	208	32	32	1024	1.1	19	59.38	172	16.80
15	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0735_1.02	Foxo6	NNVWMAAYAN	6.87e-8	3.95e-5	2.84e-2	575	32	32	1024	1.43	13	40.62	64	6.25
16	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6234_1.02	(Foxa3)_(Homo_sapiens)_(DBD_1.00)	RVWAARYAAAYAD	9.20e-8	4.11e-5	2.95e-2	447	32	32	1024	17.7	6	18.75	4	0.39
17	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6482_1.02	(Sp3)_(Homo_sapiens)_(DBD_0.97)	VGVVGGGGGCGGGGCBRGSS	1.09e-7	6.50e-5	4.67e-2	596	32	32	1024	211	5	15.62	1	0.10
18	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0131_1.02	Ahctf1	AAATAAAT	1.11e-7	6.84e-5	4.91e-2	616	32	32	1024	3.29	16	50.00	113	11.04
19	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6552_1.02	(Zfp148)_(Homo_sapiens)_(DBD_1.00)	KGVGKGGGGGAGGGG	1.49e-7	9.44e-5	6.77e-2	634	32	32	1024	115	8	25.00	16	1.56
20	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6237_1.02	(Foxd3)_(Homo_sapiens)_(DBD_1.00)	AAACAAACA	1.98e-7	1.01e-4	7.22e-2	508	32	32	1024	26.1	6	18.75	5	0.49
21	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0390_1.02	Zscan4	ATGTGCAC	9.44e-7	1.46e-4	1.05e-1	155	32	32	1024	2.16	9	28.12	31	3.03
22	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4635_1.02	(Stat2)_(Homo_sapiens)_(DBD_0.81)	GAAANYGAAACTDAA	4.12e-7	1.48e-4	1.07e-1	360	32	32	1024	1.13	24	75.00	311	30.37
23	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6123_1.02	Zfp281	GRGKTGGGGGAGGGG	2.72e-7	1.50e-4	1.07e-1	550	32	32	1024	10.4	19	59.38	180	17.58
24	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0734_1.02	Foxc1	WRNRTMAAYA	2.79e-7	1.63e-4	1.17e-1	583	32	32	1024	1.85	15	46.88	104	10.16
25	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0710_1.02	Gm5454	NRCCGGAAGY	6.98e-7	1.72e-4	1.23e-1	246	32	32	1024	6.17	4	12.50	0	0.00
26	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0732_1.02	Foxc2	WRNRTMAAYA	3.13e-7	1.82e-4	1.31e-1	582	32	32	1024	1.96	15	46.88	105	10.25
27	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6136_1.02	Bcl6	RRRDRRVVRRRRRRRRGGAAGWVWKGRARA	2.80e-7	2.12e-4	1.52e-1	756	32	32	1024	8.14	24	75.00	305	29.79
28	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1950_1.02	(Zfp354c)_(Homo_sapiens)_(DBD_0.89)	GTGGAK	4.41e-7	2.13e-4	1.53e-1	484	32	32	1024	1.74	10	31.25	38	3.71
29	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2304_1.02	Nr5a2	SCTGRCCTTGAACTY	6.98e-7	2.30e-4	1.65e-1	330	32	32	1024	202	4	12.50	0	0.00
30	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0725_1.02	Foxp1	NGTAAACAN	4.56e-7	2.41e-4	1.73e-1	527	32	32	1024	2.15	9	28.12	28	2.73
31	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5446_1.02	(Foxd1)_(Homo_sapiens)_(DBD_0.99)	GTAAACA	6.65e-7	2.53e-4	1.82e-1	381	32	32	1024	2.34	10	31.25	40	3.91
32	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0391_1.02	Bcl6b	NYCTAGAAARAN	2.80e-7	2.56e-4	1.84e-1	914	32	32	1024	2.19	27	84.38	400	39.06
33	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0747_1.02	Foxl1	WNNRTAAAYA	7.77e-7	4.26e-4	3.06e-1	549	32	32	1024	2.35	12	37.50	66	6.45
34	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6456_1.02	(Rreb1)_(Homo_sapiens)_(DBD_0.99)	DKGKKKGKGGKTGKTTKGGGKT	1.19e-6	4.27e-4	3.07e-1	359	32	32	1024	2.11	21	65.62	246	24.02
35	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0736_1.02	Foxk1	RTMAACAA	1.02e-6	4.68e-4	3.36e-1	458	32	32	1024	4.72	7	21.88	14	1.37
36	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2391_1.02	(Klf5)_(Homo_sapiens)_(DBD_0.95)	DGGGHGGGGC	8.28e-7	5.28e-4	3.79e-1	638	32	32	1024	7.4	13	40.62	81	7.91
37	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5398_1.02	(Erf)_(Homo_sapiens)_(DBD_1.00)	ACCGGAAGTR	3.42e-6	5.33e-4	3.82e-1	156	32	32	1024	23.1	4	12.50	1	0.10
38	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1882_1.02	(Irf1)_(Homo_sapiens)_(DBD_1.00)	AAANNGAAAGTGAAASYRRRN	1.38e-6	5.76e-4	4.14e-1	416	32	32	1024	3.37	18	56.25	178	17.38
39	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6466_1.02	(Smad4)_(Homo_sapiens)_(DBD_1.00)	TGTCTGBCY	1.79e-6	7.71e-4	5.54e-1	430	32	32	1024	1.07	25	78.12	366	35.74
40	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5421_1.02	(Etv2)_(Homo_sapiens)_(DBD_0.99)	AACCGGAAATR	6.85e-6	8.96e-4	6.44e-1	131	32	32	1024	8.62	6	18.75	12	1.17
41	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0700_1.02	Etv4	NRCCGGAARY	3.42e-6	9.87e-4	7.08e-1	289	32	32	1024	4.22	4	12.50	1	0.10
42	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4453_1.02	(Bcl11a)_(Homo_sapiens)_(DBD_1.00)	ADGRGGAASTGAAAV	1.86e-6	1.09e-3	7.79e-1	584	32	32	1024	1.28	28	87.50	472	46.09
43	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2300_1.02	Myog	RRCAGCTGSNV	3.42e-6	1.09e-3	7.79e-1	318	32	32	1024	16.2	4	12.50	1	0.10
44	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6553_1.02	(Zfp219)_(Homo_sapiens)_(DBD_1.00)	GDGGGGGGYGGA	1.97e-6	1.11e-3	7.98e-1	565	32	32	1024	23.6	6	18.75	9	0.88
45	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6535_1.02	(Wt1)_(Homo_sapiens)_(DBD_0.99)	GMGGGGGCGKGGG	2.35e-6	1.33e-3	9.55e-1	566	32	32	1024	10.3	12	37.50	74	7.23
46	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2314_1.02	(Sp2)_(Homo_sapiens)_(DBD_1.00)	SSVVRGRGGCGGGRC	2.44e-6	1.45e-3	1.04e0	597	32	32	1024	13.6	11	34.38	60	5.86
47	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0421_1.02	Klf8	NGGGYGKGKN	2.50e-6	1.60e-3	1.15e0	642	32	32	1024	2.03	13	40.62	90	8.79
48	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0733_1.02	Foxo3	RTAAACAA	4.00e-6	1.84e-3	1.32e0	460	32	32	1024	2.94	10	31.25	50	4.88
49	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0724_1.02	Foxp2	RTAAACAA	4.27e-6	1.87e-3	1.34e0	438	32	32	1024	1.91	14	43.75	112	10.94
50	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0633_1.02	(Dmrt2)_(Homo_sapiens)_(DBD_1.00)	KAATKTATWN	6.71e-6	2.25e-3	1.61e0	335	32	32	1024	2.78	13	40.62	99	9.67
51	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0698_1.02	Etv5	RCCGGAARY	1.00e-5	2.91e-3	2.09e0	291	32	32	1024	3.63	4	12.50	2	0.20
52	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2317_1.02	Tcf12	RACAGCTGSNV	1.00e-5	3.18e-3	2.29e0	318	32	32	1024	17.1	4	12.50	2	0.20
53	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2299_1.02	Myod1	NRNRRCAGCTGSN	1.00e-5	3.31e-3	2.38e0	331	32	32	1024	16.5	4	12.50	2	0.20
54	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2271_1.02	E2f3	SDSYGVGGGCGGGAR	7.54e-6	3.49e-3	2.51e0	464	32	32	1024	33	5	15.62	6	0.59
55	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0178_1.02	Ascl2	NVCAGCTGBN	1.00e-5	4.65e-3	3.34e0	465	32	32	1024	3.72	4	12.50	2	0.20
56	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6122_1.02	Sfpi1	ARAAAGAGGAAGTGR	7.64e-6	5.31e-3	3.81e0	697	32	32	1024	1.29	30	93.75	588	57.42
57	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0695_1.02	Elk1	NRCCGGAAGY	2.29e-5	6.12e-3	4.39e0	268	32	32	1024	5.36	4	12.50	3	0.29
58	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0635_1.02	Dmrtc2	NAMATGTATHMWN	2.53e-5	6.62e-3	4.75e0	262	32	32	1024	9.63	3	9.38	0	0.00
59	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0216_1.02	Nhlh2	NGCAGCTGYN	2.29e-5	7.76e-3	5.57e0	340	32	32	1024	4.48	4	12.50	3	0.29
60	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6323_1.02	(Klf3)_(Homo_sapiens)_(DBD_1.00)	HRCYWGGGTGKGGCT	2.49e-5	7.80e-3	5.60e0	315	32	32	1024	1.87	17	53.12	195	19.04
61	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1641_1.02	Tbp	WTAWAWN	2.53e-5	1.34e-2	9.62e0	532	32	32	1024	2.69	3	9.38	0	0.00
62	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0692_1.02	Elk3	NRCCGGAARY	4.48e-5	1.37e-2	9.81e0	307	32	32	1024	3.43	4	12.50	4	0.39

# AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28
# The format of this file is described at http://meme-suite.org/doc/ame-output-format.html.
# ame --control --shuffle-- -o AME-CISBP_Mus_musculus-gencode.vM4.annotation.TSS-500bp.GreyGenes ../gencode.vM4.annotation.TSS-500bp.GreyGenes.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme