rank	motif_DB	motif_ID	motif_alt_ID	consensus	p-value	adj_p-value	E-value	tests	FASTA_max	pos	neg	PWM_min	TP	%TP	FP	%FP
1	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6136_1.02	Bcl6	RRRDRRVVRRRRRRRRGGAAGWVWKGRARA	2.77e-13	2.19e-10	1.57e-7	792	66	66	1056	1.84	63	95.45	571	54.07
2	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2283_1.02	(Foxp4)_(Homo_sapiens)_(DBD_0.87)	HWWADGTAAACAAAR	5.68e-10	2.72e-7	1.95e-4	478	66	66	1056	3.33	37	56.06	211	19.98
3	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2274_1.02	Egr2	GKGYGTGGGYGKRDS	1.79e-9	7.91e-7	5.68e-4	443	66	66	1056	140	7	10.61	0	0.00
4	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2271_1.02	E2f3	SDSYGVGGGCGGGAR	2.84e-9	1.21e-6	8.68e-4	426	66	66	1056	3.23	32	48.48	167	15.81
5	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0414_1.02	Egr3	RCGTGGGYGD	3.87e-9	2.07e-6	1.49e-3	535	66	66	1056	5.31	8	12.12	2	0.19
6	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1882_1.02	(Irf1)_(Homo_sapiens)_(DBD_1.00)	AAANNGAAAGTGAAASYRRRN	5.54e-9	2.37e-6	1.70e-3	427	66	66	1056	2.94	38	57.58	242	22.92
7	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4599_1.02	(E2f6)_(Homo_sapiens)_(DBD_0.98)	NRGGCGGGARR	1.22e-8	6.47e-6	4.64e-3	529	66	66	1056	2.77	31	46.97	167	15.81
8	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6221_1.02	(Ets2)_(Homo_sapiens)_(DBD_1.00)	VMVGGAAGTKS	1.88e-8	1.33e-5	9.52e-3	704	66	66	1056	1.8	35	53.03	216	20.45
9	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6212_1.02	(Hif3a)_(Homo_sapiens)_(DBD_0.74)	CMCACGYAYDCAC	7.96e-8	2.13e-5	1.53e-2	267	66	66	1056	1.03	35	53.03	229	21.69
10	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0218_1.02	Bhlha15	SCATATGT	3.66e-7	9.63e-5	6.91e-2	263	66	66	1056	1.07	32	48.48	207	19.60
11	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6122_1.02	Sfpi1	ARAAAGAGGAAGTGR	1.66e-7	1.10e-4	7.93e-2	666	66	66	1056	3.64	35	53.03	236	22.35
12	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0131_1.02	Ahctf1	AAATAAAT	2.83e-7	1.43e-4	1.03e-1	505	66	66	1056	6.37	9	13.64	10	0.95
13	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0405_1.02	Klf7	DGGGCGKGGY	2.96e-7	1.72e-4	1.23e-1	581	66	66	1056	4.15	16	24.24	50	4.73
14	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2314_1.02	(Sp2)_(Homo_sapiens)_(DBD_1.00)	SSVVRGRGGCGGGRC	3.12e-7	1.86e-4	1.33e-1	596	66	66	1056	11.5	29	43.94	171	16.19
15	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6121_1.02	Pou5f1	TTTRCATDWNAAARR	4.28e-7	2.09e-4	1.50e-1	488	66	66	1056	5.87	25	37.88	131	12.41
16	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1956_1.02	(Rest)_(Homo_sapiens)_(DBD_0.98)	TTCAGCACCATGGACAGCDCC	3.01e-6	3.04e-4	2.18e-1	101	66	66	1056	4.84	12	18.18	32	3.03
17	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6250_1.02	(Foxq1)_(Homo_sapiens)_(DBD_1.00)	AAATAAACAATD	1.50e-6	3.04e-4	2.19e-1	203	66	66	1056	20.2	8	12.12	9	0.85
18	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6336_1.02	(Maz)_(Homo_sapiens)_(DBD_0.98)	RGGGDRGGGAGGGRGGG	5.81e-7	3.82e-4	2.74e-1	657	66	66	1056	15.9	34	51.52	236	22.35
19	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0443_1.02	Klf12	DGGGYGKGKY	9.20e-7	5.02e-4	3.61e-1	546	66	66	1056	3.44	17	25.76	63	5.97
20	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6241_1.02	(Foxn3)_(Homo_sapiens)_(DBD_0.45)	WAAAYAAACA	1.32e-6	5.61e-4	4.03e-1	424	66	66	1056	16.6	9	13.64	13	1.23
21	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0689_1.02	Etv3	NDNMGGAWRY	2.29e-6	9.19e-4	6.60e-1	401	66	66	1056	1.32	15	22.73	52	4.92
22	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2391_1.02	(Klf5)_(Homo_sapiens)_(DBD_0.95)	DGGGHGGGGC	1.53e-6	9.77e-4	7.01e-1	637	66	66	1056	5.08	30	45.45	197	18.66
23	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5209_1.02	(Sp5)_(Drosophila_melanogaster)_(DBD_0.93)	GKGGGCGKRKC	2.38e-6	9.99e-4	7.17e-1	419	66	66	1056	6.61	16	24.24	60	5.68
24	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6553_1.02	(Zfp219)_(Homo_sapiens)_(DBD_1.00)	GDGGGGGGYGGA	2.42e-6	1.29e-3	9.24e-1	533	66	66	1056	2.8	37	56.06	291	27.56
25	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6237_1.02	(Foxd3)_(Homo_sapiens)_(DBD_1.00)	AAACAAACA	2.76e-6	1.31e-3	9.40e-1	475	66	66	1056	7.34	17	25.76	69	6.53
26	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6244_1.02	(Foxm1)_(Homo_sapiens)_(DBD_0.99)	RWAAWCAMWCAAV	2.57e-6	1.51e-3	1.08e0	586	66	66	1056	12	8	12.12	10	0.95
27	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6482_1.02	(Sp3)_(Homo_sapiens)_(DBD_0.97)	VGVVGGGGGCGGGGCBRGSS	2.67e-6	1.60e-3	1.15e0	599	66	66	1056	4.7	39	59.09	320	30.30
28	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0434_1.02	Zscan4c	KVTGTGCAB	4.28e-6	2.14e-3	1.53e0	499	66	66	1056	1.04	45	68.18	416	39.39
29	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4466_1.02	(Mef2a)_(Homo_sapiens)_(DBD_1.00)	NDKCYAAAAATAGMH	5.49e-6	2.19e-3	1.57e0	399	66	66	1056	1.29	37	56.06	301	28.50
30	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6535_1.02	(Wt1)_(Homo_sapiens)_(DBD_0.99)	GMGGGGGCGKGGG	4.40e-6	2.47e-3	1.78e0	563	66	66	1056	80.6	7	10.61	7	0.66
31	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0421_1.02	Klf8	NGGGYGKGKN	3.92e-6	2.59e-3	1.86e0	663	66	66	1056	2.86	12	18.18	33	3.12
32	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6321_1.02	(Klf15)_(Homo_sapiens)_(DBD_1.00)	RSMKGGGAGDKGGGGSS	4.84e-6	2.74e-3	1.97e0	567	66	66	1056	1.85	44	66.67	402	38.07
33	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6201_1.02	(Egr4)_(Homo_sapiens)_(DBD_1.00)	GGSGGYRGGGM	6.82e-6	3.02e-3	2.17e0	443	66	66	1056	11.7	21	31.82	112	10.61
34	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0687_1.02	Elf3	WNVMGGAARW	4.08e-6	3.11e-3	2.23e0	763	66	66	1056	1.56	22	33.33	118	11.17
35	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2264_1.02	Atoh1	RCCAKCTG	7.22e-6	3.12e-3	2.24e0	433	66	66	1056	3.74	23	34.85	133	12.59
36	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6358_1.02	(Neurod1)_(Homo_sapiens)_(DBD_1.00)	SGGCAGRTGKSC	1.04e-5	4.72e-3	3.39e0	456	66	66	1056	7.6	8	12.12	13	1.23
37	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1265_1.02	Irf7	DAARCGAAAR	7.48e-6	4.81e-3	3.45e0	644	66	66	1056	1.03	54	81.82	580	54.92
38	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6552_1.02	(Zfp148)_(Homo_sapiens)_(DBD_1.00)	KGVGKGGGGGAGGGG	8.38e-6	5.06e-3	3.63e0	605	66	66	1056	11.8	31	46.97	227	21.50
39	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4635_1.02	(Stat2)_(Homo_sapiens)_(DBD_0.81)	GAAANYGAAACTDAA	1.58e-5	5.67e-3	4.07e0	360	66	66	1056	1.2	35	53.03	287	27.18
40	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6123_1.02	Zfp281	GRGKTGGGGGAGGGG	1.10e-5	6.02e-3	4.32e0	548	66	66	1056	3.62	38	57.58	324	30.68
41	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6346_1.02	(Mlxipl)_(Homo_sapiens)_(DBD_1.00)	VCACGVSGKKGBCMCRTGC	5.10e-5	7.01e-3	5.03e0	138	66	66	1056	8.32	7	10.61	12	1.14
42	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0714_1.02	Gm4881	NDBCGGAWRY	1.85e-5	7.01e-3	5.03e0	381	66	66	1056	1.36	16	24.24	72	6.82
43	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4467_1.02	(Mef2c)_(Homo_sapiens)_(DBD_1.00)	NDKCYAAAAATAGMH	2.15e-5	8.58e-3	6.16e0	401	66	66	1056	1.38	35	53.03	291	27.56
44	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4453_1.02	(Bcl11a)_(Homo_sapiens)_(DBD_1.00)	ADGRGGAASTGAAAV	1.72e-5	9.56e-3	6.86e0	559	66	66	1056	1.4	41	62.12	374	35.42
45	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4537_1.02	(E2f4)_(Homo_sapiens)_(DBD_1.00)	GGCGGGAARWTBVRR	3.40e-5	1.01e-2	7.27e0	299	66	66	1056	2.27	18	27.27	95	9.00
46	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4708_1.02	(Tbpl2)_(Homo_sapiens)_(DBD_0.85)	TATGCAAATA	3.22e-5	1.02e-2	7.33e0	319	66	66	1056	1.55	27	40.91	193	18.28
47	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1358_1.02	Terf2	NAACCCTAV	5.10e-5	1.07e-2	7.72e0	212	66	66	1056	7.63	7	10.61	12	1.14
48	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0198_1.02	Sohlh2	NRYNCGTGCN	4.10e-5	1.08e-2	7.73e0	264	66	66	1056	1.97	6	9.09	7	0.66
49	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0728_1.02	Foxj1	NRTAAACAAANN	2.15e-5	1.12e-2	8.03e0	523	66	66	1056	5.77	16	24.24	73	6.91
50	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4612_1.02	(Ctcfl)_(Homo_sapiens)_(DBD_0.81)	CCRSCAGGGGGCGCY	3.38e-5	1.24e-2	8.89e0	369	66	66	1056	53.9	7	10.61	11	1.04
51	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0746_1.02	Gm5294	NNTRTAAACAHN	3.08e-5	1.29e-2	9.28e0	423	66	66	1056	1.82	29	43.94	217	20.55

# AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28
# The format of this file is described at http://meme-suite.org/doc/ame-output-format.html.
# ame --control --shuffle-- -o AME-CISBP_Mus_musculus-gencode.vM4.annotation.TSS-500bp.BlueGenes ../gencode.vM4.annotation.TSS-500bp.BlueGenes.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme