## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.EstimateLibraryComplexity INPUT=[thyroid_gland-ENCSR914DTI-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.bam] OUTPUT=thyroid_gland-ENCSR914DTI-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.est_lib_complex_metrics.txt    MIN_IDENTICAL_BASES=5 MAX_DIFF_RATE=0.03 MIN_MEAN_QUALITY=20 MAX_GROUP_RATIO=500 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 25 10:30:59 PST 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown	0	33434586	0	0	5344245	4604431	0.159842	552096118

## HISTOGRAM	java.lang.Integer
duplication_group_count	Unknown
1	23694826
2	3636893
3	614801
4	113672
5	22795
6	5165
7	1286
8	332
9	143
10	63
11	50
12	29
13	28
14	21
15	32
16	20
17	20
18	15
19	10
20	14
21	9
22	9
23	6
24	13
25	3
26	8
27	6
28	4
29	4
30	2
31	7
32	1
33	1
34	2
35	2
37	4
38	2
39	3
40	1
41	1
43	1
44	2
45	1
46	1
47	3
48	1
49	2
50	2
51	2
52	1
53	3
54	3
55	1
56	2
57	1
59	2
61	1
62	4
63	1
64	1
65	1
68	2
69	1
70	2
71	1
72	1
73	2
74	2
75	1
76	1
80	2
81	3
82	1
83	2
87	2
92	1
98	1
104	1
135	1
138	1
157	1
164	1
187	1
212	1
223	1
237	1