## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.EstimateLibraryComplexity INPUT=[thyroid_gland-ENCSR201FIW-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.bam] OUTPUT=thyroid_gland-ENCSR201FIW-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.est_lib_complex_metrics.txt    MIN_IDENTICAL_BASES=5 MAX_DIFF_RATE=0.03 MIN_MEAN_QUALITY=20 MAX_GROUP_RATIO=500 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 25 10:30:59 PST 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown	0	24957663	0	0	3743689	3202254	0.150002	429794941

## HISTOGRAM	java.lang.Integer
duplication_group_count	Unknown
1	18116946
2	2586103
3	416410
4	74714
5	14622
6	3194
7	809
8	273
9	140
10	83
11	53
12	54
13	42
14	31
15	36
16	32
17	31
18	32
19	18
20	25
21	13
22	22
23	14
24	18
25	19
26	15
27	9
28	17
29	14
30	13
31	9
32	14
33	7
34	9
35	6
36	6
37	8
38	3
39	10
40	2
41	8
42	3
43	5
44	3
45	4
46	2
47	2
48	4
49	3
50	1
51	6
52	4
53	3
55	3
56	2
57	1
58	2
60	6
61	4
64	1
65	1
66	2
67	2
68	2
69	1
70	1
71	1
72	2
76	1
77	3
80	2
82	1
83	1
86	1
87	2
90	1
91	1
92	2
93	1
95	1
96	2
98	3
101	1
105	1
110	1
114	1
115	2
118	2
119	1
127	1
129	1
130	2
132	1
133	1
135	1
137	2
138	1
144	2
150	2
151	1
152	1
166	1
190	1
203	1
210	1
217	1
279	1
283	1
330	1
360	1
402	1