## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[gastroesophageal_sphincter-ENCSR670REK-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.bam] OUTPUT=gastroesophageal_sphincter-ENCSR670REK-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.dedup.bam METRICS_FILE=gastroesophageal_sphincter-ENCSR670REK-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Sep 04 10:20:22 PDT 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	74431983	0	0	10524373	8753307	0.141396	1195829896

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.129175
2.0	2.190209
3.0	3.187215
4.0	4.124056
5.0	5.004363
6.0	5.831548
7.0	6.608815
8.0	7.339178
9.0	8.025468
10.0	8.670342
11.0	9.276302
12.0	9.845694
13.0	10.380726
14.0	10.883472
15.0	11.355879
16.0	11.799779
17.0	12.216891
18.0	12.608832
19.0	12.977122
20.0	13.323187
21.0	13.648368
22.0	13.953926
23.0	14.241046
24.0	14.510838
25.0	14.764351
26.0	15.002564
27.0	15.226403
28.0	15.436734
29.0	15.634373
30.0	15.820085
31.0	15.99459
32.0	16.158564
33.0	16.312644
34.0	16.457425
35.0	16.59347
36.0	16.721304
37.0	16.841425
38.0	16.954297
39.0	17.060357
40.0	17.160018
41.0	17.253664
42.0	17.341659
43.0	17.424344
44.0	17.50204
45.0	17.575046
46.0	17.643648
47.0	17.708109
48.0	17.76868
49.0	17.825597
50.0	17.879078
51.0	17.929332
52.0	17.976554
53.0	18.020926
54.0	18.062621
55.0	18.101799
56.0	18.138613
57.0	18.173205
58.0	18.20571
59.0	18.236254
60.0	18.264954
61.0	18.291923
62.0	18.317264
63.0	18.341075
64.0	18.36345
65.0	18.384475
66.0	18.404231
67.0	18.422794
68.0	18.440238
69.0	18.456629
70.0	18.47203
71.0	18.486503
72.0	18.500102
73.0	18.51288
74.0	18.524887
75.0	18.53617
76.0	18.546771
77.0	18.556733
78.0	18.566094
79.0	18.57489
80.0	18.583155
81.0	18.590922
82.0	18.59822
83.0	18.605077
84.0	18.61152
85.0	18.617575
86.0	18.623264
87.0	18.62861
88.0	18.633634
89.0	18.638354
90.0	18.64279
91.0	18.646957
92.0	18.650874
93.0	18.654553
94.0	18.658011
95.0	18.66126
96.0	18.664314
97.0	18.667182
98.0	18.669878
99.0	18.672411
100.0	18.674792