## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.EstimateLibraryComplexity INPUT=[gastrocnemius_medialis-ENCSR308HPZ-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.bam] OUTPUT=gastrocnemius_medialis-ENCSR308HPZ-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.est_lib_complex_metrics.txt    MIN_IDENTICAL_BASES=5 MAX_DIFF_RATE=0.03 MIN_MEAN_QUALITY=20 MAX_GROUP_RATIO=500 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 25 10:30:48 PST 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown	0	42429642	0	0	1419832	454297	0.033463	898364949

## HISTOGRAM	java.lang.Integer
duplication_group_count	Unknown
1	39720411
2	1195498
3	73211
4	13365
5	4044
6	1602
7	723
8	340
9	208
10	123
11	66
12	55
13	35
14	28
15	17
16	12
17	15
18	4
19	5
20	11
21	7
22	3
23	4
24	1
25	3
27	1
28	4
29	2
31	1
33	1
34	2
35	3
37	1
38	2
41	1
42	2
44	3
45	2
46	1
47	1
54	1
56	1
58	1
60	1
66	1
70	1