## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[body_of_pancreas-ENCSR765MXG-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.bam] OUTPUT=body_of_pancreas-ENCSR765MXG-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.dedup.bam METRICS_FILE=body_of_pancreas-ENCSR765MXG-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Sep 04 10:20:25 PDT 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	50323701	0	0	2738494	812741	0.054418	619848549

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.015758
2.0	1.952309
3.0	2.815828
4.0	3.612011
5.0	4.346109
6.0	5.022963
7.0	5.647036
8.0	6.222445
9.0	6.752984
10.0	7.242153
11.0	7.693176
12.0	8.10903
13.0	8.492455
14.0	8.845982
15.0	9.171941
16.0	9.472482
17.0	9.749587
18.0	10.005084
19.0	10.240657
20.0	10.457861
21.0	10.658127
22.0	10.842777
23.0	11.013028
24.0	11.170003
25.0	11.314738
26.0	11.448186
27.0	11.571228
28.0	11.684675
29.0	11.789276
30.0	11.885721
31.0	11.974644
32.0	12.056634
33.0	12.13223
34.0	12.201931
35.0	12.266197
36.0	12.325451
37.0	12.380085
38.0	12.430459
39.0	12.476904
40.0	12.519728
41.0	12.559213
42.0	12.595618
43.0	12.629185
44.0	12.660134
45.0	12.68867
46.0	12.71498
47.0	12.739239
48.0	12.761606
49.0	12.78223
50.0	12.801244
51.0	12.818777
52.0	12.834942
53.0	12.849846
54.0	12.863588
55.0	12.876259
56.0	12.887942
57.0	12.898713
58.0	12.908645
59.0	12.917802
60.0	12.926245
61.0	12.93403
62.0	12.941208
63.0	12.947826
64.0	12.953927
65.0	12.959554
66.0	12.964741
67.0	12.969524
68.0	12.973934
69.0	12.978
70.0	12.981749
71.0	12.985205
72.0	12.988392
73.0	12.991331
74.0	12.99404
75.0	12.996539
76.0	12.998842
77.0	13.000966
78.0	13.002924
79.0	13.004729
80.0	13.006394
81.0	13.007929
82.0	13.009344
83.0	13.010649
84.0	13.011852
85.0	13.012961
86.0	13.013984
87.0	13.014927
88.0	13.015796
89.0	13.016598
90.0	13.017337
91.0	13.018018
92.0	13.018647
93.0	13.019226
94.0	13.01976
95.0	13.020253
96.0	13.020707
97.0	13.021126
98.0	13.021512
99.0	13.021868
100.0	13.022196