## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.EstimateLibraryComplexity INPUT=[Peyers_patch-ENCSR017RQC-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.bam] OUTPUT=Peyers_patch-ENCSR017RQC-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.est_lib_complex_metrics.txt    MIN_IDENTICAL_BASES=5 MAX_DIFF_RATE=0.03 MIN_MEAN_QUALITY=20 MAX_GROUP_RATIO=500 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 25 10:30:54 PST 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown	0	45831723	0	0	2383784	1873991	0.052012	1880482453

## HISTOGRAM	java.lang.Integer
duplication_group_count	Unknown
1	41193563
2	2142031
3	104361
4	6115
5	735
6	302
7	191
8	117
9	86
10	57
11	49
12	55
13	42
14	34
15	22
16	23
17	15
18	5
19	10
20	9
21	11
22	11
23	11
24	6
25	6
26	5
27	2
28	6
29	3
30	6
31	2
32	2
33	5
34	1
35	1
36	3
37	3
38	1
39	5
40	1
41	2
42	3
43	1
44	2
45	2
46	3
47	1
48	2
49	2
50	3
51	2
52	2
53	3
55	1
56	2
60	1
62	1
64	2
72	1
78	1
93	1
96	1
105	1
115	1
156	1