#Deleted in new
chr1	226679	226804
#Deleted in new
chr1	469688	469840
#Deleted in new
chr1	739528	739720
#Deleted in new
chr1	813997	814393
#Deleted in new
chr1	1133875	1134000
#Deleted in new
chr1	2833898	2834023
#Deleted in new
chr1	3078101	3078340
#Partially deleted in new
chr1	3182185	3182310
#Partially deleted in new
chr1	5073187	5073525
#Partially deleted in new
chr1	10491864	10491989
#Deleted in new
chr1	12649577	12649792
#Deleted in new
chr1	13975994	13976165
#Partially deleted in new
chr1	14629916	14630063
#Deleted in new
chr1	14699664	14699911
#Deleted in new
chr1	16183591	16183926
#Deleted in new
chr1	16195757	16195882
#Deleted in new
chr1	18126682	18126890
#Deleted in new
chr1	18330387	18330615
#Deleted in new
chr1	18866441	18866641
#Deleted in new
chr1	20954739	20955040
#Deleted in new
chr1	24513966	24514134
#Partially deleted in new
chr1	25708043	25708168
#Deleted in new
chr1	25809808	25809978
#Deleted in new
chr1	26920818	26920982
#Deleted in new
chr1	26953947	26954143
#Partially deleted in new
chr1	27611371	27611564
#Deleted in new
chr1	27803604	27803851
#Deleted in new
chr1	29034530	29034751
#Deleted in new
chr1	29931599	29931724
#Deleted in new
chr1	30454045	30454221
#Partially deleted in new
chr1	35020030	35020180
#Deleted in new
chr1	35731713	35731848
#Partially deleted in new
chr1	36962907	36963038
#Deleted in new
chr1	38281348	38281543
#Deleted in new
chr1	38431471	38431604
#Partially deleted in new
chr1	39411072	39411260
#Deleted in new
chr1	40578964	40579120
#Deleted in new
chr1	40633958	40634162
#Deleted in new
chr1	41823196	41823321
#Deleted in new
chr1	42264043	42264168
#Partially deleted in new
chr1	42656867	42657064
#Deleted in new
chr1	43405361	43405487
#Deleted in new
chr1	45305729	45305854
#Partially deleted in new
chr1	46179734	46179919
#Partially deleted in new
chr1	46905177	46905355
#Partially deleted in new
chr1	47941601	47941743
#Deleted in new
chr1	49334598	49334810
#Deleted in new
chr1	49803328	49803471
#Deleted in new
chr1	52142214	52142399
#Deleted in new
chr1	55108968	55109140
#Deleted in new
chr1	55115242	55115497
#Deleted in new
chr1	55416227	55416397
#Partially deleted in new
chr1	55476486	55476611
#Deleted in new
chr1	55581750	55582010
#Deleted in new
chr1	55776558	55776740
#Deleted in new
chr1	56191237	56191489
#Deleted in new
chr1	57223639	57223778
#Deleted in new
chr1	57657565	57657719
#Deleted in new
chr1	58200210	58200408
#Deleted in new
chr1	58591633	58591758
#Deleted in new
chr1	61849660	61849912
#Deleted in new
chr1	61893516	61893730
#Partially deleted in new
chr1	62113693	62113881
#Partially deleted in new
chr1	62470728	62470853
#Deleted in new
chr1	62796631	62796887
#Deleted in new
chr1	66058918	66059043
#Deleted in new
chr1	66244456	66244581
#Deleted in new
chr1	68561877	68562002
#Deleted in new
chr1	69155981	69156141
#Deleted in new
chr1	69564656	69564792
#Deleted in new
chr1	69647002	69647321
#Deleted in new
chr1	69856910	69857095
#Deleted in new
chr1	70035377	70035643
#Partially deleted in new
chr1	70545367	70545563
#Deleted in new
chr1	70710820	70710979
#Deleted in new
chr1	71028220	71028478
#Duplicated in new
chr1	71577008	71577271
#Deleted in new
chr1	72041182	72041692
#Deleted in new
chr1	72060307	72060469
#Deleted in new
chr1	72131523	72131676
#Deleted in new
chr1	72240616	72240754
#Deleted in new
chr1	72309194	72309355
#Deleted in new
chr1	72912278	72912650
#Deleted in new
chr1	73497376	73497622
#Deleted in new
chr1	73596208	73596333
#Deleted in new
chr1	75048122	75048302
#Deleted in new
chr1	75742277	75742402
#Partially deleted in new
chr1	75804764	75804899
#Deleted in new
chr1	75843671	75843922
#Deleted in new
chr1	75929341	75929481
#Deleted in new
chr1	76294134	76294268
#Deleted in new
chr1	76443305	76443470
#Deleted in new
chr1	76908254	76908449
#Deleted in new
chr1	78543787	78544025
#Deleted in new
chr1	80061312	80061508
#Deleted in new
chr1	80483021	80483227
#Deleted in new
chr1	80954616	80954833
#Deleted in new
chr1	82028542	82028667
#Partially deleted in new
chr1	82554404	82554546
#Deleted in new
chr1	84104714	84104839
#Partially deleted in new
chr1	84905797	84905922
#Deleted in new
chr1	85039892	85040044
#Deleted in new
chr1	85192218	85192404
#Deleted in new
chr1	85493806	85494045
#Deleted in new
chr1	85548281	85548471
#Deleted in new
chr1	85766801	85766944
#Deleted in new
chr1	85926618	85926766
#Deleted in new
chr1	85942956	85943084
#Deleted in new
chr1	88255139	88255363
#Deleted in new
chr1	92836763	92836891
#Deleted in new
chr1	93111739	93111910
#Deleted in new
chr1	93293820	93293945
#Deleted in new
chr1	93295132	93295257
#Deleted in new
chr1	93448724	93448849
#Deleted in new
chr1	93941693	93941944
#Deleted in new
chr1	93957969	93958094
#Deleted in new
chr1	95618219	95618396
#Deleted in new
chr1	95897596	95897802
#Deleted in new
chr1	96014089	96014266
#Deleted in new
chr1	96906206	96906447
#Deleted in new
chr1	97285012	97285276
#Deleted in new
chr1	97600535	97600678
#Deleted in new
chr1	97607892	97608093
#Deleted in new
chr1	97852699	97852842
#Deleted in new
chr1	97853988	97854143
#Deleted in new
chr1	98023508	98023723
#Deleted in new
chr1	98027208	98027333
#Deleted in new
chr1	98376874	98376999
#Deleted in new
chr1	98552818	98553273
#Deleted in new
chr1	98696440	98696565
#Partially deleted in new
chr1	98937825	98938063
#Deleted in new
chr1	98972451	98972691
#Deleted in new
chr1	99045789	99046014
#Deleted in new
chr1	99344858	99345103
#Deleted in new
chr1	99378767	99378909
#Deleted in new
chr1	99379373	99379596
#Deleted in new
chr1	99834315	99834555
#Deleted in new
chr1	99863412	99863593
#Deleted in new
chr1	101156923	101157064
#Deleted in new
chr1	101161187	101161403
#Deleted in new
chr1	101344251	101344392
#Deleted in new
chr1	101657366	101657690
#Deleted in new
chr1	101657744	101657987
#Deleted in new
chr1	101782654	101782823
#Deleted in new
chr1	101856545	101856670
#Deleted in new
chr1	102106773	102107037
#Deleted in new
chr1	102209234	102209471
#Deleted in new
chr1	102266951	102267112
#Deleted in new
chr1	102378765	102378944
#Deleted in new
chr1	102484755	102484880
#Deleted in new
chr1	102554457	102554682
#Deleted in new
chr1	102676867	102677040
#Deleted in new
chr1	102827324	102827579
#Deleted in new
chr1	102831468	102831684
#Deleted in new
chr1	103005722	103005898
#Deleted in new
chr1	103111947	103112199
#Deleted in new
chr1	103174067	103174240
#Deleted in new
chr1	105338744	105338941
#Duplicated in new
chr1	105546328	105546480
#Partially deleted in new
chr1	105580259	105580405
#Deleted in new
chr1	105642879	105643342
#Deleted in new
chr1	105751835	105751974
#Deleted in new
chr1	106058267	106058513
#Deleted in new
chr1	106253435	106253641
#Deleted in new
chr1	106264305	106264430
#Deleted in new
chr1	106264579	106264811
#Deleted in new
chr1	106327533	106327742
#Partially deleted in new
chr1	106340584	106340810
#Deleted in new
chr1	106503526	106503751
#Deleted in new
chr1	106512122	106512265
#Deleted in new
chr1	106638222	106638349
#Deleted in new
chr1	106702394	106702591
#Deleted in new
chr1	106841948	106842092
#Deleted in new
chr1	107101102	107101338
#Deleted in new
chr1	107449354	107449814
#Deleted in new
chr1	107463208	107463456
#Deleted in new
chr1	107508857	107509166
#Deleted in new
chr1	107551902	107552065
#Deleted in new
chr1	107713288	107713420
#Deleted in new
chr1	107886600	107887098
#Deleted in new
chr1	107970960	107971189
#Deleted in new
chr1	108204247	108204464
#Deleted in new
chr1	108296080	108296306
#Deleted in new
chr1	108341885	108342060
#Deleted in new
chr1	108411593	108411718
#Deleted in new
chr1	108449839	108450025
#Deleted in new
chr1	108701416	108701602
#Partially deleted in new
chr1	108732962	108733202
#Partially deleted in new
chr1	108825213	108825635
#Partially deleted in new
chr1	108872051	108872183
#Deleted in new
chr1	108946369	108946596
#Deleted in new
chr1	109171423	109171548
#Deleted in new
chr1	109323526	109323720
#Deleted in new
chr1	109432794	109432919
#Partially deleted in new
chr1	109433426	109433551
#Deleted in new
chr1	109437522	109437670
#Deleted in new
chr1	109545228	109545366
#Deleted in new
chr1	109552034	109552302
#Deleted in new
chr1	109557538	109557673
#Deleted in new
chr1	109558014	109558247
#Deleted in new
chr1	109558334	109558502
#Deleted in new
chr1	109773188	109773405
#Duplicated in new
chr1	109912626	109913017
#Deleted in new
chr1	110034055	110034208
#Partially deleted in new
chr1	110111704	110111879
#Deleted in new
chr1	110175033	110175183
#Deleted in new
chr1	110311617	110311852
#Partially deleted in new
chr1	110362749	110362973
#Deleted in new
chr1	110395738	110395879
#Deleted in new
chr1	110640838	110641098
#Deleted in new
chr1	110764352	110764584
#Deleted in new
chr1	110776591	110776716
#Deleted in new
chr1	111367281	111367443
#Deleted in new
chr1	111891087	111891360
#Partially deleted in new
chr1	112476814	112477054
#Deleted in new
chr1	112558661	112558955
#Deleted in new
chr1	112774671	112774828
#Deleted in new
chr1	112961541	112961743
#Deleted in new
chr1	113232553	113232678
#Deleted in new
chr1	113350613	113350792
#Partially deleted in new
chr1	113762455	113762656
#Deleted in new
chr1	114091566	114091774
#Deleted in new
chr1	114146833	114146964
#Deleted in new
chr1	114172625	114172810
#Deleted in new
chr1	114172898	114173023
#Deleted in new
chr1	114551092	114551376
#Deleted in new
chr1	114668847	114669124
#Deleted in new
chr1	114839303	114839512
#Deleted in new
chr1	114943923	114944148
#Deleted in new
chr1	115805651	115805781
#Deleted in new
chr1	116448890	116449061
#Deleted in new
chr1	116826329	116826499
#Deleted in new
chr1	117346348	117346478
#Deleted in new
chr1	117570979	117571104
#Deleted in new
chr1	117916876	117917025
#Deleted in new
chr1	118151287	118151428
#Deleted in new
chr1	118237317	118237517
#Deleted in new
chr1	119137496	119137621
#Deleted in new
chr1	119137841	119138238
#Deleted in new
chr1	119268415	119268592
#Deleted in new
chr1	119419089	119419214
#Deleted in new
chr1	121585991	121586119
#Deleted in new
chr10	87489	87649
#Deleted in new
chr10	255724	255900
#Deleted in new
chr10	370764	370899
#Deleted in new
chr10	372671	372796
#Deleted in new
chr10	387779	387986
#Deleted in new
chr10	466537	466713
#Deleted in new
chr10	468115	468249
#Deleted in new
chr10	546509	546634
#Deleted in new
chr10	718566	718700
#Deleted in new
chr10	751314	751547
#Deleted in new
chr10	938172	938297
#Deleted in new
chr10	1032046	1032171
#Deleted in new
chr10	1073274	1073521
#Deleted in new
chr10	1545057	1545192
#Deleted in new
chr10	1733426	1733630
#Deleted in new
chr10	3699870	3700001
#Partially deleted in new
chr10	5462444	5462591
#Duplicated in new
chr10	5703082	5703442
#Deleted in new
chr10	7092549	7092716
#Deleted in new
chr10	8467967	8468213
#Deleted in new
chr10	10854758	10854947
#Deleted in new
chr10	10891435	10891560
#Deleted in new
chr10	11312877	11313130
#Deleted in new
chr10	11363174	11363475
#Deleted in new
chr10	11366227	11366441
#Deleted in new
chr10	11504012	11504158
#Partially deleted in new
chr10	11720492	11720714
#Deleted in new
chr10	12461437	12461618
#Deleted in new
chr10	13658604	13658729
#Partially deleted in new
chr10	16897175	16897361
#Deleted in new
chr10	16916379	16916585
#Deleted in new
chr10	17014225	17014597
#Deleted in new
chr10	17221189	17221426
#Deleted in new
chr10	19537157	19537400
#Deleted in new
chr10	20534098	20534291
#Partially deleted in new
chr10	20592777	20592988
#Deleted in new
chr10	21803665	21803843
#Deleted in new
chr10	21923297	21923422
#Deleted in new
chr10	22450519	22450671
#Deleted in new
chr10	22664158	22664527
#Deleted in new
chr10	22729979	22730104
#Deleted in new
chr10	22800262	22800503
#Deleted in new
chr10	22803663	22803880
#Deleted in new
chr10	22894710	22894836
#Deleted in new
chr10	22952297	22952659
#Deleted in new
chr10	23571570	23571695
#Deleted in new
chr10	23627567	23627698
#Deleted in new
chr10	23692275	23692484
#Deleted in new
chr10	23922510	23922745
#Deleted in new
chr10	23972279	23972513
#Deleted in new
chr10	24430694	24430819
#Deleted in new
chr10	25526239	25526437
#Deleted in new
chr10	25904368	25904617
#Deleted in new
chr10	26156471	26156623
#Deleted in new
chr10	26620260	26620385
#Deleted in new
chr10	26842196	26842365
#Deleted in new
chr10	27502984	27503124
#Deleted in new
chr10	27528321	27528662
#Deleted in new
chr10	27943586	27943765
#Deleted in new
chr10	28188656	28188934
#Deleted in new
chr10	28244177	28244306
#Deleted in new
chr10	28532090	28532356
#Deleted in new
chr10	28769378	28769559
#Partially deleted in new
chr10	30474393	30474634
#Deleted in new
chr10	31001450	31001669
#Partially deleted in new
chr10	31946515	31946655
#Deleted in new
chr10	33378133	33378279
#Partially deleted in new
chr10	33444508	33444686
#Deleted in new
chr10	34133034	34133198
#Deleted in new
chr10	34248245	34248539
#Partially deleted in new
chr10	34271838	34271964
#Deleted in new
chr10	34388126	34388344
#Deleted in new
chr10	34888043	34888204
#Deleted in new
chr10	35154323	35154472
#Deleted in new
chr10	35164432	35164639
#Deleted in new
chr10	35187843	35188068
#Deleted in new
chr10	35599115	35599390
#Deleted in new
chr10	35700501	35700654
#Deleted in new
chr10	37355653	37355817
#Deleted in new
chr10	37486953	37487078
#Deleted in new
chr10	37903313	37903558
#Deleted in new
chr10	40958605	40958730
#Deleted in new
chr10	41675905	41676051
#Deleted in new
chr10	41712249	41712388
#Partially deleted in new
chr10	43125363	43125609
#Deleted in new
chr10	43239102	43239227
#Deleted in new
chr10	43379191	43379455
#Deleted in new
chr10	44142180	44142395
#Deleted in new
chr10	45392253	45392486
#Deleted in new
chr10	45392622	45392758
#Deleted in new
chr10	45582650	45582788
#Partially deleted in new
chr10	45699345	45699542
#Partially deleted in new
chr10	45939295	45939429
#Partially deleted in new
chr10	46863593	46863807
#Deleted in new
chr10	47676943	47677135
#Deleted in new
chr10	47941110	47941325
#Deleted in new
chr10	48514416	48514541
#Deleted in new
chr10	48677210	48677431
#Deleted in new
chr10	49410329	49410574
#Deleted in new
chr10	49491985	49492110
#Deleted in new
chr10	49505567	49505794
#Deleted in new
chr10	50404916	50405137
#Deleted in new
chr10	50741859	50741993
#Deleted in new
chr10	53919300	53919500
#Partially deleted in new
chr10	54692260	54692458
#Partially deleted in new
chr10	55190437	55190655
#Deleted in new
chr10	55265580	55265714
#Partially deleted in new
chr10	56224680	56224847
#Deleted in new
chr10	56316152	56316277
#Deleted in new
chr10	58376450	58376704
#Partially deleted in new
chr10	58924548	58924673
#Deleted in new
chr10	61256982	61257110
#Partially deleted in new
chr10	61504288	61504472
#Deleted in new
chr10	61513984	61514124
#Deleted in new
chr10	61891553	61891740
#Deleted in new
chr10	61956435	61956590
#Deleted in new
chr10	62074733	62074917
#Deleted in new
chr10	62268744	62268869
#Deleted in new
chr10	62573658	62573783
#Deleted in new
chr10	63383024	63383307
#Deleted in new
chr10	63391340	63391493
#Deleted in new
chr10	64126184	64126309
#Deleted in new
chr10	64522582	64522933
#Deleted in new
chr10	64672180	64672431
#Partially deleted in new
chr10	68699016	68699141
#Deleted in new
chr11	59273	59398
#Deleted in new
chr11	130064	130189
#Deleted in new
chr11	196494	196639
#Deleted in new
chr11	229619	229864
#Deleted in new
chr11	529787	529920
#Deleted in new
chr11	830448	830669
#Deleted in new
chr11	1001246	1001497
#Partially deleted in new
chr11	1185117	1185333
#Deleted in new
chr11	1246952	1247182
#Deleted in new
chr11	1909240	1909431
#Deleted in new
chr11	1944332	1944715
#Deleted in new
chr11	1995994	1996123
#Deleted in new
chr11	2043096	2043263
#Deleted in new
chr11	2130072	2130354
#Deleted in new
chr11	2130469	2130594
#Deleted in new
chr11	2513676	2513812
#Deleted in new
chr11	2828686	2828838
#Deleted in new
chr11	2828971	2829207
#Deleted in new
chr11	2830028	2830257
#Deleted in new
chr11	3173584	3173723
#Deleted in new
chr11	3441008	3441173
#Deleted in new
chr11	3461387	3461512
#Deleted in new
chr11	5338084	5338232
#Deleted in new
chr11	5619310	5619442
#Deleted in new
chr11	5621900	5622092
#Deleted in new
chr11	7421734	7421859
#Deleted in new
chr11	8306230	8306440
#Deleted in new
chr11	8397038	8397163
#Deleted in new
chr11	10014329	10014550
#Deleted in new
chr11	10166971	10167163
#Deleted in new
chr11	11368690	11368815
#Deleted in new
chr11	11752228	11752362
#Deleted in new
chr11	12769173	12769309
#Partially deleted in new
chr11	15668722	15669066
#Deleted in new
chr11	15798270	15798509
#Deleted in new
chr11	15833685	15833877
#Deleted in new
chr11	15927459	15927716
#Deleted in new
chr11	16007333	16007483
#Deleted in new
chr11	17925524	17925750
#Deleted in new
chr11	18107111	18107347
#Deleted in new
chr11	18494909	18495034
#Deleted in new
chr11	19563387	19563597
#Deleted in new
chr11	20591487	20591762
#Deleted in new
chr11	21049057	21049182
#Partially deleted in new
chr11	21145935	21146062
#Partially deleted in new
chr11	21982607	21982834
#Partially deleted in new
chr11	22298769	22298894
#Deleted in new
chr11	22383011	22383136
#Deleted in new
chr11	22941554	22941694
#Partially deleted in new
chr11	24483971	24484100
#Deleted in new
chr11	25737228	25737374
#Deleted in new
chr11	26276778	26276903
#Deleted in new
chr11	26566198	26566323
#Partially deleted in new
chr11	26672741	26672872
#Deleted in new
chr11	26810603	26810815
#Deleted in new
chr11	26851246	26851457
#Deleted in new
chr11	26859815	26860065
#Deleted in new
chr11	27108109	27108349
#Deleted in new
chr11	27469808	27469940
#Deleted in new
chr11	29085254	29085423
#Deleted in new
chr11	30602170	30602464
#Deleted in new
chr11	30652689	30652849
#Partially deleted in new
chr11	30731345	30731470
#Partially deleted in new
chr11	33720177	33720318
#Partially deleted in new
chr11	34007119	34007279
#Deleted in new
chr11	34075141	34075266
#Deleted in new
chr11	34660772	34660897
#Deleted in new
chr11	34662281	34662468
#Deleted in new
chr11	35427387	35427767
#Partially deleted in new
chr11	35786092	35786237
#Deleted in new
chr11	35877552	35877677
#Partially deleted in new
chr11	38426870	38427024
#Deleted in new
chr11	39039675	39039888
#Deleted in new
chr11	39166326	39166451
#Deleted in new
chr11	40715869	40716064
#Deleted in new
chr11	40772204	40772333
#Deleted in new
chr11	45606116	45606267
#Partially deleted in new
chr11	49768396	49768636
#Deleted in new
chr11	49836172	49836467
#Deleted in new
chr11	49849244	49849382
#Deleted in new
chr11	50200196	50200321
#Partially deleted in new
chr11	51337267	51337415
#Deleted in new
chr11	51416014	51416149
#Deleted in new
chr11	51490547	51490708
#Deleted in new
chr11	51504773	51504963
#Deleted in new
chr11	51703948	51704080
#Deleted in new
chr11	52607474	52607611
#Deleted in new
chr11	52652226	52652449
#Deleted in new
chr11	52720397	52720588
#Deleted in new
chr11	54163760	54163984
#Deleted in new
chr11	54375407	54375588
#Duplicated in new
chr11	54560199	54560578
#Deleted in new
chr11	57285162	57285324
#Partially deleted in new
chr11	57415220	57415430
#Deleted in new
chr11	57955473	57955685
#Deleted in new
chr11	58178007	58178189
#Deleted in new
chr11	58205350	58205536
#Deleted in new
chr11	58947914	58948110
#Partially deleted in new
chr11	59374134	59374330
#Deleted in new
chr11	59620715	59620847
#Duplicated in new
chr11	60740585	60740917
#Partially deleted in new
chr11	61502073	61502244
#Partially deleted in new
chr11	64287806	64287931
#Deleted in new
chr11	64352274	64352399
#Deleted in new
chr11	64425092	64425302
#Deleted in new
chr11	65231233	65231499
#Deleted in new
chr11	65595874	65595999
#Deleted in new
chr11	66244486	66244611
#Deleted in new
chr11	66281523	66281690
#Deleted in new
chr11	66521055	66521301
#Deleted in new
chr11	66561376	66561635
#Deleted in new
chr11	66614812	66614937
#Deleted in new
chr11	66828270	66828438
#Deleted in new
chr11	66837531	66837725
#Deleted in new
chr11	66873954	66874132
#Deleted in new
chr11	66903668	66903795
#Deleted in new
chr11	66944922	66945063
#Deleted in new
chr11	67314253	67314378
#Deleted in new
chr11	67756041	67756166
#Deleted in new
chr11	72613525	72613653
#Deleted in new
chr12	138765	138901
#Partially deleted in new
chr12	173079	173221
#Deleted in new
chr12	415432	415681
#Deleted in new
chr12	503963	504328
#Duplicated in new
chr12	514196	514321
#Deleted in new
chr12	604993	605286
#Deleted in new
chr12	799893	800066
#Deleted in new
chr12	919664	919843
#Deleted in new
chr12	931612	931828
#Deleted in new
chr12	1295993	1296161
#Partially deleted in new
chr12	1319095	1319291
#Deleted in new
chr12	1378523	1378754
#Deleted in new
chr12	1632555	1632848
#Duplicated in new
chr12	1650220	1650511
#Deleted in new
chr12	1999162	1999340
#Partially deleted in new
chr12	2104577	2104702
#Deleted in new
chr12	3352408	3352582
#Deleted in new
chr12	3545888	3546013
#Deleted in new
chr12	3548445	3548570
#Deleted in new
chr12	3638402	3638580
#Deleted in new
chr12	3729257	3729453
#Deleted in new
chr12	4054971	4055096
#Deleted in new
chr12	4283719	4283952
#Deleted in new
chr12	4654172	4654358
#Deleted in new
chr12	4769265	4769423
#Partially deleted in new
chr12	5010998	5011258
#Deleted in new
chr12	5054185	5054310
#Deleted in new
chr12	5474626	5474751
#Partially deleted in new
chr12	5551552	5551726
#Deleted in new
chr12	5735128	5735381
#Partially deleted in new
chr12	5933268	5933439
#Deleted in new
chr12	6097701	6097872
#Deleted in new
chr12	6111098	6111223
#Deleted in new
chr12	7321032	7321157
#Deleted in new
chr12	7579987	7580279
#Deleted in new
chr12	7580345	7580470
#Partially deleted in new
chr12	8551704	8551829
#Deleted in new
chr12	10682961	10683159
#Deleted in new
chr12	10719137	10719339
#Deleted in new
chr12	11204911	11205068
#Partially deleted in new
chr12	11499775	11499933
#Deleted in new
chr12	11700424	11700549
#Deleted in new
chr12	11803168	11803293
#Deleted in new
chr12	12603767	12603892
#Partially deleted in new
chr12	15640510	15640699
#Deleted in new
chr12	16577433	16577591
#Partially deleted in new
chr12	16725567	16725694
#Duplicated in new
chr12	16775434	16775559
#Deleted in new
chr12	17127943	17128103
#Deleted in new
chr12	17506586	17506723
#Deleted in new
chr12	17558639	17558820
#Deleted in new
chr12	18199104	18199287
#Deleted in new
chr12	18322355	18322576
#Deleted in new
chr12	19953827	19953959
#Deleted in new
chr12	20408038	20408232
#Deleted in new
chr12	20675448	20675573
#Deleted in new
chr12	20969591	20969733
#Deleted in new
chr12	21116673	21116826
#Deleted in new
chr12	21161849	21161987
#Deleted in new
chr12	21239492	21239617
#Deleted in new
chr12	21867169	21867296
#Partially deleted in new
chr12	22536656	22536781
#Partially deleted in new
chr12	23151308	23151497
#Partially deleted in new
chr12	23931081	23931307
#Deleted in new
chr12	24355628	24355812
#Partially deleted in new
chr12	24370735	24371216
#Deleted in new
chr12	24859022	24859245
#Deleted in new
chr12	27127637	27127798
#Deleted in new
chr12	30838448	30838759
#Deleted in new
chr12	32633210	32633370
#Deleted in new
chr12	33003548	33003810
#Deleted in new
chr12	35501093	35501348
#Deleted in new
chr12	35574777	35574951
#Deleted in new
chr12	35575687	35575836
#Deleted in new
chr12	35695792	35695917
#Partially deleted in new
chr12	35919131	35919256
#Deleted in new
chr12	36169151	36169368
#Partially deleted in new
chr12	36214777	36214939
#Deleted in new
chr12	37195508	37195665
#Deleted in new
chr12	38721525	38721688
#Deleted in new
chr12	39313160	39313285
#Deleted in new
chr12	39382205	39382330
#Deleted in new
chr12	40503159	40503369
#Deleted in new
chr12	40696469	40696607
#Deleted in new
chr12	41180673	41180892
#Partially deleted in new
chr12	42769923	42770048
#Partially deleted in new
chr12	42773875	42774000
#Deleted in new
chr12	44481978	44482122
#Deleted in new
chr12	46665622	46665870
#Partially deleted in new
chr12	47048850	47048975
#Deleted in new
chr12	48454044	48454169
#Deleted in new
chr12	48642040	48642165
#Deleted in new
chr12	48850550	48850737
#Deleted in new
chr12	51215892	51216017
#Deleted in new
chr12	55694768	55694947
#Deleted in new
chr12	57645479	57645626
#Deleted in new
chr12	58421169	58421318
#Deleted in new
chr12	61432949	61433091
#Deleted in new
chr12	62662801	62662985
#Deleted in new
chr12	64247851	64248090
#Deleted in new
chr12	65266064	65266222
#Partially deleted in new
chr12	66679946	66680075
#Deleted in new
chr12	67242496	67242666
#Deleted in new
chr12	67255782	67255921
#Deleted in new
chr12	67482966	67483137
#Deleted in new
chr12	67493219	67493400
#Deleted in new
chr12	67741336	67741525
#Partially deleted in new
chr12	71914849	71915051
#Deleted in new
chr12	71946692	71946889
#Deleted in new
chr13	307027	307234
#Deleted in new
chr13	787739	787881
#Deleted in new
chr13	1864466	1864594
#Deleted in new
chr13	1879478	1879612
#Deleted in new
chr13	2128201	2128336
#Deleted in new
chr13	2728062	2728249
#Deleted in new
chr13	2994003	2994128
#Deleted in new
chr13	3838350	3838475
#Deleted in new
chr13	4124945	4125133
#Deleted in new
chr13	4160935	4161166
#Partially deleted in new
chr13	4183550	4183739
#Deleted in new
chr13	4829031	4829286
#Deleted in new
chr13	5873176	5873335
#Deleted in new
chr13	8093725	8093878
#Deleted in new
chr13	10997168	10997299
#Deleted in new
chr13	12186049	12186280
#Deleted in new
chr13	16182964	16183110
#Deleted in new
chr13	16226580	16226863
#Deleted in new
chr13	16256013	16256218
#Deleted in new
chr13	17041818	17042058
#Deleted in new
chr13	19015894	19016026
#Deleted in new
chr13	19032762	19032958
#Deleted in new
chr13	19389701	19389918
#Deleted in new
chr13	19571816	19571961
#Deleted in new
chr13	19683913	19684135
#Deleted in new
chr13	20840282	20840425
#Deleted in new
chr13	21306730	21306957
#Deleted in new
chr13	21539078	21539303
#Deleted in new
chr13	22535788	22536074
#Deleted in new
chr13	22538414	22538653
#Partially deleted in new
chr13	22564772	22564998
#Deleted in new
chr13	22606256	22606407
#Deleted in new
chr13	22669520	22669741
#Deleted in new
chr13	22958870	22959023
#Deleted in new
chr13	23735794	23736079
#Partially deleted in new
chr13	23913096	23913272
#Deleted in new
chr13	23996405	23996530
#Partially deleted in new
chr13	26979312	26979447
#Deleted in new
chr13	28548017	28548181
#Deleted in new
chr13	29068395	29068616
#Deleted in new
chr13	30357793	30357918
#Deleted in new
chr13	30685413	30685570
#Deleted in new
chr13	30925747	30925931
#Deleted in new
chr13	34892636	34892856
#Deleted in new
chr13	35442853	35443160
#Deleted in new
chr13	35524826	35525082
#Deleted in new
chr13	35530886	35531049
#Deleted in new
chr13	35563352	35563477
#Deleted in new
chr13	35615504	35615763
#Deleted in new
chr13	35701416	35701623
#Deleted in new
chr13	36781645	36781796
#Deleted in new
chr13	36890072	36890395
#Deleted in new
chr13	36933096	36933235
#Deleted in new
chr13	37017349	37017559
#Deleted in new
chr13	37137861	37137999
#Deleted in new
chr13	37436773	37436987
#Deleted in new
chr13	37533610	37533768
#Deleted in new
chr13	37584423	37584593
#Deleted in new
chr13	37621041	37621225
#Deleted in new
chr13	37897745	37897971
#Deleted in new
chr13	37899125	37899412
#Deleted in new
chr13	38038551	38038676
#Deleted in new
chr13	38040199	38040485
#Deleted in new
chr13	38058273	38058451
#Deleted in new
chr13	38484768	38485072
#Deleted in new
chr13	39653277	39653473
#Deleted in new
chr13	39696921	39697063
#Deleted in new
chr13	43305521	43305666
#Deleted in new
chr13	43825759	43825924
#Deleted in new
chr13	48760432	48760791
#Partially deleted in new
chr13	48988619	48988908
#Deleted in new
chr13	49054143	49054421
#Deleted in new
chr13	58798999	58799168
#Deleted in new
chr13	58933332	58933457
#Deleted in new
chr13	58951333	58951463
#Deleted in new
chr13	59356469	59356653
#Deleted in new
chr13	59988182	59988323
#Deleted in new
chr13	60125795	60125969
#Deleted in new
chr13	60432258	60432383
#Deleted in new
chr13	60823825	60823982
#Deleted in new
chr13	60843924	60844092
#Deleted in new
chr13	61777544	61777732
#Deleted in new
chr13	61852343	61852509
#Deleted in new
chr13	61920606	61920731
#Duplicated in new
chr13	62316921	62317128
#Deleted in new
chr13	62364408	62364656
#Deleted in new
chr13	62659566	62659790
#Partially deleted in new
chr13	62823113	62823353
#Deleted in new
chr14	187021	187146
#Deleted in new
chr14	803724	804009
#Deleted in new
chr14	853740	853959
#Deleted in new
chr14	2919015	2919182
#Deleted in new
chr14	3669188	3669344
#Partially deleted in new
chr14	3767026	3767230
#Deleted in new
chr14	4533243	4533497
#Partially deleted in new
chr14	5332385	5332569
#Deleted in new
chr14	5405952	5406109
#Deleted in new
chr14	5713369	5713613
#Deleted in new
chr14	5773175	5773302
#Deleted in new
chr14	6216300	6216522
#Deleted in new
chr14	6220409	6220568
#Deleted in new
chr14	6265406	6265531
#Deleted in new
chr14	7032427	7032691
#Partially deleted in new
chr14	7270324	7270525
#Deleted in new
chr14	7271905	7272030
#Deleted in new
chr14	7422926	7423112
#Deleted in new
chr14	7845599	7845776
#Deleted in new
chr14	8226610	8226778
#Partially deleted in new
chr14	8793938	8794113
#Deleted in new
chr14	10905897	10906164
#Deleted in new
chr14	11780413	11780563
#Deleted in new
chr14	13456839	13457120
#Partially deleted in new
chr14	13631426	13631624
#Deleted in new
chr14	13643227	13643363
#Partially deleted in new
chr14	13905298	13905448
#Partially deleted in new
chr14	15048533	15048698
#Deleted in new
chr14	16065430	16065660
#Partially deleted in new
chr14	16210421	16210600
#Deleted in new
chr14	17791904	17792118
#Deleted in new
chr14	18597503	18597628
#Deleted in new
chr14	20191928	20192198
#Deleted in new
chr14	20576000	20576153
#Deleted in new
chr14	20774705	20774962
#Deleted in new
chr14	22232838	22232963
#Deleted in new
chr14	22513845	22513970
#Deleted in new
chr14	22771288	22771468
#Deleted in new
chr14	23253624	23253854
#Deleted in new
chr14	25264553	25264727
#Partially deleted in new
chr14	26155929	26156212
#Deleted in new
chr14	27104286	27104429
#Deleted in new
chr14	27483590	27483737
#Deleted in new
chr14	27511525	27511650
#Deleted in new
chr14	28124174	28124300
#Deleted in new
chr14	31640319	31640570
#Partially deleted in new
chr14	31692871	31693109
#Deleted in new
chr14	35462213	35462414
#Deleted in new
chr14	35474454	35474592
#Deleted in new
chr14	35816770	35817035
#Partially deleted in new
chr14	36746280	36746477
#Deleted in new
chr14	36785982	36786291
#Deleted in new
chr14	37015387	37015549
#Deleted in new
chr14	37049651	37049883
#Deleted in new
chr14	38590835	38591060
#Deleted in new
chr14	39312498	39312700
#Deleted in new
chr14	39659253	39659472
#Deleted in new
chr14	39764641	39764841
#Deleted in new
chr14	40445759	40445941
#Deleted in new
chr14	45220615	45220767
#Partially deleted in new
chr14	46556025	46556216
#Deleted in new
chr14	46902208	46902454
#Duplicated in new
chr14	47174430	47174693
#Deleted in new
chr14	48795839	48796041
#Deleted in new
chr14	48800660	48800906
#Deleted in new
chr14	51559371	51559496
#Deleted in new
chr14	51678583	51678762
#Deleted in new
chr14	52199388	52199541
#Deleted in new
chr14	53536458	53536583
#Deleted in new
chr14	55437029	55437192
#Deleted in new
chr14	55840341	55840466
#Deleted in new
chr14	60082725	60082850
#Partially deleted in new
chr15	645610	645844
#Deleted in new
chr15	1966205	1966358
#Deleted in new
chr15	1982957	1983103
#Deleted in new
chr15	2398810	2399142
#Deleted in new
chr15	3548804	3548957
#Deleted in new
chr15	3604701	3604863
#Deleted in new
chr15	3792408	3792638
#Deleted in new
chr15	3802722	3802992
#Partially deleted in new
chr15	4968042	4968223
#Deleted in new
chr15	6042275	6042441
#Deleted in new
chr15	6763629	6763841
#Deleted in new
chr15	6849577	6849702
#Deleted in new
chr15	8364574	8364798
#Deleted in new
chr15	8720991	8721116
#Deleted in new
chr15	8844256	8844448
#Deleted in new
chr15	8847419	8847653
#Partially deleted in new
chr15	9604645	9604860
#Deleted in new
chr15	10328418	10328676
#Deleted in new
chr15	10715699	10715884
#Deleted in new
chr15	11262737	11262958
#Deleted in new
chr15	12337679	12337894
#Deleted in new
chr15	13594066	13594191
#Deleted in new
chr15	14431855	14432045
#Deleted in new
chr15	14610483	14610707
#Deleted in new
chr15	14621412	14621558
#Deleted in new
chr15	14991524	14991679
#Partially deleted in new
chr15	15328984	15329109
#Deleted in new
chr15	16177871	16178072
#Partially deleted in new
chr15	16641420	16641626
#Deleted in new
chr15	17049392	17049613
#Deleted in new
chr15	17689643	17689768
#Deleted in new
chr15	17857458	17857687
#Deleted in new
chr15	18001468	18001630
#Deleted in new
chr15	18284129	18284311
#Deleted in new
chr15	18368979	18369104
#Deleted in new
chr15	19650686	19650811
#Deleted in new
chr15	25105094	25105219
#Partially deleted in new
chr15	28257004	28257145
#Deleted in new
chr15	28345383	28345576
#Deleted in new
chr15	28744363	28744629
#Deleted in new
chr15	29222143	29222325
#Deleted in new
chr15	29283698	29283865
#Deleted in new
chr15	29509740	29509904
#Deleted in new
chr15	30373242	30373444
#Deleted in new
chr15	31087811	31088019
#Deleted in new
chr15	33659521	33659646
#Deleted in new
chr15	33674381	33674555
#Deleted in new
chr15	33842875	33843058
#Deleted in new
chr15	34929572	34929754
#Deleted in new
chr15	35446738	35446893
#Deleted in new
chr15	35738983	35739111
#Partially deleted in new
chr15	35746630	35746796
#Partially deleted in new
chr15	38006025	38006284
#Partially deleted in new
chr15	39096354	39096629
#Deleted in new
chr15	39151563	39151688
#Partially deleted in new
chr15	40528454	40528588
#Deleted in new
chr15	40648609	40648991
#Partially deleted in new
chr15	40924295	40924420
#Deleted in new
chr15	42651901	42652026
#Partially deleted in new
chr15	42668139	42668315
#Deleted in new
chr15	42681104	42681445
#Deleted in new
chr15	42692057	42692276
#Deleted in new
chr15	42756428	42756558
#Deleted in new
chr15	43899493	43899655
#Deleted in new
chr15	44156274	44156411
#Deleted in new
chr15	44272248	44272416
#Deleted in new
chr15	46044827	46044995
#Deleted in new
chr15	46049194	46049457
#Partially deleted in new
chr15	46185867	46186021
#Deleted in new
chr15	46317045	46317170
#Deleted in new
chr15	46398756	46398933
#Deleted in new
chr15	46542958	46543083
#Deleted in new
chr15	49345001	49345230
#Deleted in new
chr15	51182859	51182985
#Partially deleted in new
chr15	51612387	51612639
#Partially deleted in new
chr15	52541462	52541664
#Deleted in new
chr15	52836636	52836761
#Deleted in new
chr15	52836864	52837112
#Deleted in new
chr15	53017830	53017983
#Deleted in new
chr15	53462182	53462346
#Deleted in new
chr15	55975165	55975316
#Partially deleted in new
chr15	58616043	58616168
#Deleted in new
chr15	61308032	61308240
#Deleted in new
chr15	63490950	63491108
#Partially deleted in new
chr16	93366	93509
#Deleted in new
chr16	105436	105607
#Deleted in new
chr16	156484	156614
#Deleted in new
chr16	1030726	1030889
#Deleted in new
chr16	1087026	1087241
#Deleted in new
chr16	1519913	1520075
#Deleted in new
chr16	1992877	1993002
#Deleted in new
chr16	2019147	2019272
#Deleted in new
chr16	2168206	2168334
#Deleted in new
chr16	3093202	3093408
#Deleted in new
chr16	4774332	4774590
#Partially deleted in new
chr16	4833476	4833602
#Deleted in new
chr16	5258217	5258360
#Deleted in new
chr16	5304270	5304570
#Deleted in new
chr16	6775464	6775700
#Deleted in new
chr16	6807619	6807787
#Duplicated in new
chr16	6989170	6989343
#Deleted in new
chr16	7010659	7010788
#Deleted in new
chr16	7013848	7014064
#Deleted in new
chr16	7299732	7299887
#Deleted in new
chr16	7491386	7491618
#Deleted in new
chr16	8511027	8511173
#Deleted in new
chr16	8847859	8848065
#Deleted in new
chr16	9503060	9503186
#Deleted in new
chr16	9523747	9524076
#Deleted in new
chr16	10336522	10336663
#Partially deleted in new
chr16	10355783	10355935
#Deleted in new
chr16	12307675	12307843
#Deleted in new
chr16	12960484	12960689
#Deleted in new
chr16	13542817	13543007
#Deleted in new
chr16	13582908	13583127
#Deleted in new
chr16	13591346	13591471
#Deleted in new
chr16	14275224	14275368
#Duplicated in new
chr16	14428985	14429312
#Deleted in new
chr16	14473316	14473485
#Deleted in new
chr16	14474062	14474387
#Deleted in new
chr16	14518271	14518452
#Partially deleted in new
chr16	14692609	14692817
#Deleted in new
chr16	15342289	15342414
#Deleted in new
chr16	15430283	15430408
#Deleted in new
chr16	15506146	15506304
#Deleted in new
chr16	15816547	15816692
#Partially deleted in new
chr16	16270199	16270427
#Deleted in new
chr16	16421791	16421938
#Deleted in new
chr16	17334712	17334837
#Deleted in new
chr16	18241761	18241909
#Deleted in new
chr16	18458274	18458410
#Deleted in new
chr16	18642722	18642978
#Partially deleted in new
chr16	19237768	19237969
#Deleted in new
chr16	19889616	19889759
#Deleted in new
chr16	19910892	19911055
#Partially deleted in new
chr16	20631021	20631214
#Deleted in new
chr16	20834718	20834896
#Deleted in new
chr16	21182853	21183127
#Deleted in new
chr16	21183401	21183553
#Deleted in new
chr16	21226509	21226741
#Deleted in new
chr16	21261609	21261773
#Deleted in new
chr16	21491989	21492114
#Deleted in new
chr16	21886703	21886879
#Deleted in new
chr16	22597195	22597396
#Deleted in new
chr16	22716446	22716666
#Deleted in new
chr16	22768252	22768450
#Deleted in new
chr16	23053825	23054051
#Deleted in new
chr16	23103411	23103596
#Deleted in new
chr16	23117147	23117313
#Deleted in new
chr16	23358397	23358631
#Deleted in new
chr16	23596800	23597042
#Partially deleted in new
chr16	24023725	24023858
#Deleted in new
chr16	24091492	24091617
#Deleted in new
chr16	24164691	24164860
#Deleted in new
chr16	25021470	25021696
#Deleted in new
chr16	25177001	25177126
#Deleted in new
chr16	25271343	25271494
#Deleted in new
chr16	25413241	25413412
#Deleted in new
chr16	25444560	25444756
#Deleted in new
chr16	26437845	26438061
#Deleted in new
chr16	27048032	27048244
#Deleted in new
chr16	27049119	27049300
#Deleted in new
chr16	27302584	27302767
#Deleted in new
chr16	27344858	27345042
#Deleted in new
chr16	27482310	27482537
#Deleted in new
chr16	27494940	27495137
#Deleted in new
chr16	27794037	27794162
#Deleted in new
chr16	28190208	28190364
#Deleted in new
chr16	33782189	33782381
#Deleted in new
chr16	33862825	33862959
#Deleted in new
chr16	34004605	34004794
#Deleted in new
chr16	34058298	34058530
#Deleted in new
chr16	35837125	35837290
#Deleted in new
chr16	35954219	35954360
#Deleted in new
chr16	36197816	36198114
#Partially deleted in new
chr16	37062745	37062894
#Deleted in new
chr16	39060789	39061046
#Deleted in new
chr16	39427003	39427188
#Deleted in new
chr16	40129904	40130141
#Deleted in new
chr16	41314435	41314564
#Deleted in new
chr16	41315757	41315891
#Deleted in new
chr16	41373604	41373977
#Partially deleted in new
chr16	44877903	44878156
#Deleted in new
chr16	45249050	45249283
#Deleted in new
chr16	45409350	45409516
#Deleted in new
chr16	45636762	45636932
#Deleted in new
chr16	46002469	46002620
#Deleted in new
chr16	46754875	46755029
#Partially deleted in new
chr16	49387140	49387365
#Deleted in new
chr16	49536642	49536770
#Deleted in new
chr16	52230939	52231114
#Deleted in new
chr16	53354380	53354616
#Deleted in new
chr16	53994864	53995057
#Deleted in new
chr16	53996875	53997120
#Deleted in new
chr16	54284754	54284919
#Deleted in new
chr16	57226601	57226770
#Deleted in new
chr16	58270382	58270508
#Deleted in new
chr17	99558	99793
#Deleted in new
chr17	2114321	2114528
#Partially deleted in new
chr17	4478212	4478337
#Deleted in new
chr17	4659114	4659254
#Deleted in new
chr17	6515495	6515708
#Deleted in new
chr17	7050237	7050770
#Deleted in new
chr17	7134623	7134817
#Deleted in new
chr17	7186486	7186611
#Partially deleted in new
chr17	7649937	7650085
#Partially deleted in new
chr17	8735298	8735511
#Deleted in new
chr17	8865630	8865866
#Deleted in new
chr17	11364821	11364993
#Deleted in new
chr17	11527394	11527525
#Deleted in new
chr17	15391739	15391950
#Deleted in new
chr17	18368655	18368780
#Deleted in new
chr17	18384411	18384540
#Deleted in new
chr17	18396641	18396829
#Deleted in new
chr17	18422837	18422992
#Deleted in new
chr17	19290881	19291009
#Deleted in new
chr17	19297330	19297514
#Deleted in new
chr17	19445845	19446028
#Deleted in new
chr17	19824012	19824173
#Deleted in new
chr17	20009105	20009230
#Partially deleted in new
chr17	20039409	20039577
#Deleted in new
chr17	20826701	20826846
#Deleted in new
chr17	21136660	21136853
#Deleted in new
chr17	21148458	21148583
#Deleted in new
chr17	21265793	21265974
#Deleted in new
chr17	23895523	23895729
#Deleted in new
chr17	25068378	25068541
#Deleted in new
chr17	25918850	25918983
#Deleted in new
chr17	26661056	26661181
#Deleted in new
chr17	26859073	26859252
#Deleted in new
chr17	28104411	28104561
#Deleted in new
chr17	29711470	29711678
#Deleted in new
chr17	29752256	29752381
#Deleted in new
chr17	29856161	29856321
#Deleted in new
chr17	29940543	29940668
#Partially deleted in new
chr17	31089421	31089642
#Deleted in new
chr17	31364127	31364306
#Partially deleted in new
chr17	31694711	31694984
#Deleted in new
chr17	34316236	34316412
#Partially deleted in new
chr17	34318745	34318870
#Deleted in new
chr17	34395066	34395499
#Deleted in new
chr17	34398828	34399053
#Deleted in new
chr17	34468901	34469116
#Deleted in new
chr17	34711282	34711459
#Deleted in new
chr17	34713780	34713953
#Deleted in new
chr17	35148543	35148755
#Deleted in new
chr17	35197125	35197379
#Deleted in new
chr17	35204645	35204898
#Deleted in new
chr17	36314705	36314893
#Deleted in new
chr17	36534025	36534388
#Deleted in new
chr17	36648634	36648841
#Deleted in new
chr17	36696441	36696566
#Deleted in new
chr17	36696641	36696898
#Deleted in new
chr17	36709495	36709734
#Partially deleted in new
chr17	36802626	36802850
#Deleted in new
chr17	36819991	36820116
#Deleted in new
chr17	36884704	36884990
#Deleted in new
chr17	37255464	37255741
#Deleted in new
chr17	37531732	37531984
#Duplicated in new
chr17	37544904	37545110
#Deleted in new
chr17	37595489	37595748
#Deleted in new
chr17	38112937	38113190
#Deleted in new
chr17	38518279	38518404
#Partially deleted in new
chr17	39154019	39154190
#Deleted in new
chr17	39440921	39441092
#Deleted in new
chr17	39694922	39695076
#Deleted in new
chr17	40603609	40603768
#Deleted in new
chr17	43283987	43284135
#Partially deleted in new
chr17	44630943	44631095
#Deleted in new
chr17	44863615	44863740
#Duplicated in new
chr17	47708032	47708255
#Deleted in new
chr17	47795195	47795418
#Deleted in new
chr17	47814253	47814518
#Deleted in new
chr17	48185148	48185390
#Deleted in new
chr17	48937677	48938041
#Deleted in new
chr17	49354082	49354284
#Deleted in new
chr17	49723168	49723336
#Deleted in new
chr17	49817893	49818115
#Deleted in new
chr17	51763537	51763739
#Partially deleted in new
chr17	56499151	56499423
#Deleted in new
chr17	56550489	56550614
#Duplicated in new
chr17	56559005	56559345
#Deleted in new
chr17	57377236	57377389
#Deleted in new
chr17	58050584	58050792
#Deleted in new
chr17	58786711	58786926
#Deleted in new
chr17	58818689	58818852
#Deleted in new
chr17	58836673	58836800
#Partially deleted in new
chr17	59143864	59143989
#Deleted in new
chr17	59419240	59419575
#Partially deleted in new
chr17	59459983	59460156
#Deleted in new
chr17	59482319	59482444
#Deleted in new
chr17	59544050	59544293
#Partially deleted in new
chr17	59657530	59657678
#Deleted in new
chr17	59766681	59766882
#Deleted in new
chr17	59812413	59812547
#Deleted in new
chr17	59842006	59842131
#Deleted in new
chr17	59889344	59889476
#Deleted in new
chr17	59981668	59981870
#Deleted in new
chr17	60349068	60349250
#Deleted in new
chr17	60443545	60443757
#Deleted in new
chr17	60496397	60496546
#Partially deleted in new
chr17	60531996	60532151
#Partially deleted in new
chr17	60750930	60751073
#Deleted in new
chr17	60765882	60766017
#Deleted in new
chr17	61799145	61799391
#Deleted in new
chr17	62473011	62473136
#Deleted in new
chr17	62530127	62530295
#Deleted in new
chr17	62700426	62700551
#Deleted in new
chr17	62745979	62746150
#Deleted in new
chr17	62916349	62916501
#Deleted in new
chr17	63137446	63137586
#Deleted in new
chr17	64017795	64017920
#Deleted in new
chr17	64232669	64232943
#Partially deleted in new
chr18	508927	509153
#Deleted in new
chr18	1639212	1639346
#Deleted in new
chr18	2410711	2410841
#Deleted in new
chr18	3867109	3867240
#Deleted in new
chr18	6248046	6248263
#Deleted in new
chr18	6268270	6268577
#Deleted in new
chr18	6515876	6516039
#Deleted in new
chr18	6979981	6980192
#Deleted in new
chr18	7211869	7212043
#Deleted in new
chr18	7339434	7339623
#Deleted in new
chr18	7586281	7586406
#Deleted in new
chr18	9778130	9778260
#Deleted in new
chr18	9965247	9965381
#Deleted in new
chr18	9998348	9998522
#Deleted in new
chr18	10732046	10732200
#Duplicated in new
chr18	13137713	13137920
#Deleted in new
chr18	13243650	13243775
#Deleted in new
chr18	13261703	13261828
#Deleted in new
chr18	13323408	13323533
#Deleted in new
chr18	14039987	14040386
#Deleted in new
chr18	14259681	14259834
#Deleted in new
chr18	14291681	14291859
#Deleted in new
chr18	14910111	14910331
#Deleted in new
chr18	15024202	15024343
#Deleted in new
chr18	16943556	16943683
#Deleted in new
chr18	17523818	17524029
#Deleted in new
chr18	17697494	17697621
#Deleted in new
chr18	17911386	17911517
#Partially deleted in new
chr18	18234925	18235076
#Deleted in new
chr18	20380818	20380982
#Deleted in new
chr18	25332976	25333208
#Partially deleted in new
chr18	25350630	25350874
#Deleted in new
chr18	25455119	25455446
#Deleted in new
chr18	25509706	25510031
#Deleted in new
chr18	25582169	25582372
#Deleted in new
chr18	26016263	26016481
#Deleted in new
chr18	31698444	31698604
#Deleted in new
chr18	32499593	32499773
#Partially deleted in new
chr18	33778812	33778953
#Partially deleted in new
chr18	34277474	34277599
#Deleted in new
chr18	34843390	34843554
#Deleted in new
chr18	34907039	34907176
#Deleted in new
chr18	36072426	36072656
#Deleted in new
chr18	37026499	37026677
#Deleted in new
chr18	37659662	37659871
#Deleted in new
chr18	37734724	37734849
#Deleted in new
chr18	37735340	37735546
#Deleted in new
chr18	38466565	38466703
#Deleted in new
chr18	38488893	38489106
#Deleted in new
chr18	38554964	38555089
#Deleted in new
chr18	40953580	40953734
#Deleted in new
chr18	41256591	41256886
#Deleted in new
chr18	41432793	41433008
#Deleted in new
chr18	41583525	41583667
#Deleted in new
chr18	41903279	41903454
#Deleted in new
chr18	41917764	41917889
#Deleted in new
chr18	41994434	41994570
#Partially deleted in new
chr18	42100391	42100527
#Deleted in new
chr18	42468573	42468713
#Partially deleted in new
chr18	42472126	42472335
#Deleted in new
chr18	42771216	42771483
#Deleted in new
chr18	42797302	42797444
#Deleted in new
chr18	42873878	42874004
#Deleted in new
chr18	42962414	42962608
#Deleted in new
chr18	44505881	44506006
#Deleted in new
chr18	45228190	45228448
#Deleted in new
chr18	45314075	45314366
#Deleted in new
chr18	45314418	45314605
#Deleted in new
chr18	45318067	45318220
#Deleted in new
chr18	45592725	45592953
#Deleted in new
chr18	45717280	45717419
#Deleted in new
chr18	45855105	45855241
#Deleted in new
chr18	45855327	45855584
#Deleted in new
chr18	45890022	45890191
#Deleted in new
chr18	45905166	45905341
#Deleted in new
chr18	45978848	45978981
#Deleted in new
chr18	45979081	45979206
#Duplicated in new
chr18	46329826	46330055
#Deleted in new
chr18	46400148	46400463
#Deleted in new
chr18	46410986	46411161
#Deleted in new
chr18	46555549	46555705
#Partially deleted in new
chr18	46688809	46689701
#Deleted in new
chr18	46689854	46689979
#Deleted in new
chr18	46873939	46874092
#Deleted in new
chr18	46901971	46902117
#Deleted in new
chr18	46974988	46975212
#Deleted in new
chr18	47022974	47023099
#Deleted in new
chr18	47024309	47024434
#Deleted in new
chr18	47254879	47255143
#Deleted in new
chr18	47259729	47259941
#Deleted in new
chr18	47328639	47328829
#Partially deleted in new
chr18	47381666	47381840
#Deleted in new
chr18	47524022	47524198
#Deleted in new
chr18	47526819	47527329
#Deleted in new
chr18	47551077	47551202
#Deleted in new
chr18	48308126	48308328
#Deleted in new
chr18	49109160	49109285
#Deleted in new
chr18	49572350	49572477
#Deleted in new
chr18	49609543	49609735
#Deleted in new
chr18	49730908	49731239
#Deleted in new
chr18	49772893	49773256
#Deleted in new
chr18	49848945	49849094
#Deleted in new
chr18	49931438	49931563
#Duplicated in new
chr18	50001087	50001268
#Deleted in new
chr18	50104127	50104353
#Deleted in new
chr18	50246210	50246470
#Deleted in new
chr18	50773442	50773663
#Deleted in new
chr18	50933181	50933306
#Deleted in new
chr18	50942850	50943003
#Deleted in new
chr18	51238311	51238495
#Deleted in new
chr18	51483400	51483653
#Deleted in new
chr18	51516679	51516804
#Deleted in new
chr18	51683974	51684268
#Deleted in new
chr18	51691353	51691531
#Deleted in new
chr18	51742968	51743182
#Deleted in new
chr18	51859911	51860108
#Deleted in new
chr18	51922476	51922601
#Deleted in new
chr18	51935406	51935606
#Deleted in new
chr18	51963242	51963425
#Deleted in new
chr18	52034846	52034998
#Deleted in new
chr18	52049825	52050159
#Duplicated in new
chr18	52068974	52069178
#Partially deleted in new
chr18	52144456	52144886
#Deleted in new
chr18	52652872	52652997
#Deleted in new
chr18	53467659	53467915
#Partially deleted in new
chr18	53674785	53674931
#Deleted in new
chr18	53696752	53696896
#Deleted in new
chr18	53828212	53828450
#Deleted in new
chr18	54338716	54338853
#Deleted in new
chr18	54496670	54496892
#Deleted in new
chr18	54616502	54616701
#Deleted in new
chr18	54630384	54630558
#Deleted in new
chr18	54665145	54665311
#Deleted in new
chr18	55019192	55019413
#Deleted in new
chr18	55521295	55521472
#Deleted in new
chr18	55803054	55803218
#Deleted in new
chr19	2247588	2247782
#Deleted in new
chr19	3199106	3199242
#Deleted in new
chr19	3236491	3236706
#Deleted in new
chr19	3504630	3504792
#Deleted in new
chr19	4483222	4483363
#Deleted in new
chr19	8069153	8069343
#Deleted in new
chr19	9929638	9929903
#Deleted in new
chr19	11022747	11022872
#Partially deleted in new
chr19	11473817	11474102
#Deleted in new
chr19	11875034	11875161
#Partially deleted in new
chr19	12146372	12146558
#Deleted in new
chr19	13034531	13034731
#Deleted in new
chr19	14265776	14265974
#Deleted in new
chr19	14405015	14405204
#Deleted in new
chr19	16113314	16113524
#Partially deleted in new
chr19	18013733	18014003
#Deleted in new
chr19	19081014	19081155
#Deleted in new
chr19	20952388	20952706
#Deleted in new
chr19	21518210	21518335
#Deleted in new
chr19	22388362	22388497
#Deleted in new
chr19	22710999	22711177
#Deleted in new
chr19	22858765	22858995
#Deleted in new
chr19	22898226	22898653
#Duplicated in new
chr19	23141341	23141658
#Deleted in new
chr19	23630569	23630792
#Deleted in new
chr19	27133220	27133400
#Deleted in new
chr19	28847823	28848082
#Partially deleted in new
chr19	29631717	29631842
#Deleted in new
chr19	29911007	29911164
#Deleted in new
chr19	29978517	29978712
#Partially deleted in new
chr19	30288114	30288239
#Deleted in new
chr19	30619878	30620029
#Deleted in new
chr19	30677674	30677875
#Deleted in new
chr19	30834743	30834993
#Deleted in new
chr19	32668263	32668499
#Deleted in new
chr19	35343841	35343966
#Partially deleted in new
chr19	35426224	35426360
#Partially deleted in new
chr19	35897232	35897382
#Deleted in new
chr19	36214132	36214361
#Deleted in new
chr19	37194378	37194529
#Deleted in new
chr19	37822746	37822919
#Deleted in new
chr19	38260928	38261077
#Deleted in new
chr19	38588364	38588609
#Deleted in new
chr19	39045933	39046069
#Deleted in new
chr19	39198974	39199181
#Deleted in new
chr19	40556636	40556761
#Deleted in new
chr19	40922131	40922330
#Deleted in new
chr19	43451486	43451613
#Deleted in new
chr19	50430101	50430226
#Partially deleted in new
chr19	51626699	51626865
#Partially deleted in new
chr19	53664765	53664900
#Deleted in new
chr2	2314031	2314156
#Partially deleted in new
chr2	3503873	3503998
#Partially deleted in new
chr2	6787562	6787714
#Partially deleted in new
chr2	9062815	9062940
#Deleted in new
chr2	9766956	9767081
#Deleted in new
chr2	9781710	9781835
#Deleted in new
chr2	9908250	9908375
#Deleted in new
chr2	10545720	10545855
#Deleted in new
chr2	11906622	11906763
#Deleted in new
chr2	11997265	11997405
#Deleted in new
chr2	12410531	12410740
#Deleted in new
chr2	13505824	13505982
#Deleted in new
chr2	13636911	13637071
#Deleted in new
chr2	14043228	14043365
#Partially deleted in new
chr2	14548126	14548378
#Deleted in new
chr2	16706975	16707255
#Deleted in new
chr2	16813695	16813894
#Deleted in new
chr2	17281814	17281977
#Deleted in new
chr2	18006364	18006661
#Deleted in new
chr2	20336763	20336888
#Deleted in new
chr2	21332092	21332289
#Deleted in new
chr2	21518677	21518860
#Deleted in new
chr2	22155994	22156168
#Deleted in new
chr2	23311750	23311958
#Deleted in new
chr2	24178782	24178949
#Deleted in new
chr2	25443674	25443807
#Deleted in new
chr2	28526388	28526604
#Deleted in new
chr2	29040370	29040536
#Deleted in new
chr2	30109125	30109406
#Deleted in new
chr2	32222819	32223054
#Deleted in new
chr2	32341315	32341440
#Partially deleted in new
chr2	32746752	32746970
#Deleted in new
chr2	34593126	34593303
#Deleted in new
chr2	34593440	34593565
#Deleted in new
chr2	35286928	35287152
#Deleted in new
chr2	35671807	35671932
#Deleted in new
chr2	35771830	35771955
#Partially deleted in new
chr2	36561956	36562171
#Deleted in new
chr2	37156638	37156763
#Deleted in new
chr2	38234566	38234691
#Deleted in new
chr2	42104538	42104663
#Deleted in new
chr2	42421637	42421814
#Deleted in new
chr2	42605571	42605696
#Deleted in new
chr2	42880705	42880987
#Deleted in new
chr2	42990133	42990308
#Deleted in new
chr2	43360608	43360864
#Deleted in new
chr2	45368765	45369003
#Deleted in new
chr2	45743031	45743219
#Partially deleted in new
chr2	47350497	47350622
#Deleted in new
chr2	47486360	47486506
#Partially deleted in new
chr2	47637715	47637840
#Deleted in new
chr2	47964441	47964566
#Deleted in new
chr2	48923544	48923669
#Deleted in new
chr2	51549917	51550161
#Deleted in new
chr2	52649804	52649967
#Deleted in new
chr2	53155159	53155284
#Deleted in new
chr2	54384680	54384863
#Deleted in new
chr2	54466734	54466909
#Deleted in new
chr2	54759057	54759265
#Deleted in new
chr2	56664931	56665056
#Deleted in new
chr2	57194304	57194558
#Deleted in new
chr2	57194595	57194738
#Deleted in new
chr2	57723498	57723713
#Deleted in new
chr2	58062735	58062873
#Partially deleted in new
chr2	58475872	58476067
#Deleted in new
chr2	58488455	58488580
#Deleted in new
chr2	58862928	58863170
#Deleted in new
chr2	58879556	58879828
#Deleted in new
chr2	59098597	59098849
#Deleted in new
chr2	59869867	59870043
#Deleted in new
chr2	60397891	60398049
#Deleted in new
chr2	60556245	60556379
#Deleted in new
chr2	61981873	61982082
#Partially deleted in new
chr2	62277824	62277961
#Duplicated in new
chr2	62299224	62299387
#Partially deleted in new
chr2	62308523	62308726
#Deleted in new
chr2	62492140	62492265
#Deleted in new
chr2	64399047	64399212
#Deleted in new
chr2	64858323	64858467
#Deleted in new
chr2	65060932	65061057
#Partially deleted in new
chr2	65183888	65184115
#Deleted in new
chr2	65286191	65286350
#Deleted in new
chr2	65318432	65318557
#Deleted in new
chr2	65461099	65461224
#Deleted in new
chr2	65907300	65907520
#Deleted in new
chr2	66659995	66660142
#Deleted in new
chr2	67729631	67729756
#Deleted in new
chr2	67770982	67771185
#Deleted in new
chr2	67853467	67853612
#Deleted in new
chr2	68342118	68342358
#Partially deleted in new
chr2	68644999	68645124
#Partially deleted in new
chr2	68691167	68691292
#Deleted in new
chr2	68931571	68931704
#Partially deleted in new
chr2	68938247	68938396
#Deleted in new
chr2	69825246	69825435
#Deleted in new
chr2	69876411	69876602
#Deleted in new
chr2	69937660	69937799
#Deleted in new
chr2	71274321	71274506
#Deleted in new
chr2	71911625	71911881
#Deleted in new
chr2	71923171	71923320
#Deleted in new
chr2	72099439	72099568
#Deleted in new
chr2	72475457	72475611
#Deleted in new
chr2	73523197	73523404
#Deleted in new
chr2	73709961	73710086
#Deleted in new
chr2	73797186	73797489
#Deleted in new
chr2	73869691	73869826
#Deleted in new
chr2	74079989	74080114
#Deleted in new
chr2	74096619	74096778
#Deleted in new
chr2	74557633	74557764
#Deleted in new
chr2	74898182	74898400
#Deleted in new
chr2	75059056	75059181
#Deleted in new
chr2	75548493	75548708
#Partially deleted in new
chr2	75553233	75553512
#Deleted in new
chr2	76013055	76013275
#Deleted in new
chr2	76139124	76139377
#Deleted in new
chr2	76405787	76406046
#Deleted in new
chr2	77146172	77146452
#Deleted in new
chr2	77378981	77379423
#Deleted in new
chr2	77379553	77379678
#Deleted in new
chr2	77650556	77650976
#Partially deleted in new
chr2	78108446	78108583
#Deleted in new
chr2	78338636	78338978
#Partially deleted in new
chr2	78820927	78821053
#Deleted in new
chr2	79305047	79305182
#Deleted in new
chr2	80104037	80104181
#Deleted in new
chr2	80104459	80104584
#Deleted in new
chr2	80833799	80833955
#Partially deleted in new
chr2	81005254	81005545
#Partially deleted in new
chr2	81290952	81291077
#Deleted in new
chr2	81818481	81818617
#Deleted in new
chr2	81932532	81932694
#Duplicated in new
chr2	83690382	83690601
#Deleted in new
chr2	83705322	83705504
#Deleted in new
chr2	84369974	84370100
#Deleted in new
chr2	85375832	85375957
#Deleted in new
chr20	449645	449818
#Deleted in new
chr20	714617	714855
#Deleted in new
chr20	822858	823064
#Deleted in new
chr20	851643	851827
#Deleted in new
chr20	1026405	1026583
#Deleted in new
chr20	1770449	1770647
#Partially deleted in new
chr20	1883578	1883703
#Deleted in new
chr20	1916962	1917179
#Partially deleted in new
chr20	2126831	2126956
#Deleted in new
chr20	2599391	2599524
#Deleted in new
chr20	2719737	2719877
#Deleted in new
chr20	3508265	3508400
#Deleted in new
chr20	3634373	3634498
#Deleted in new
chr20	5315316	5315482
#Deleted in new
chr20	5376022	5376206
#Deleted in new
chr20	5459649	5459881
#Deleted in new
chr20	5490471	5490668
#Partially deleted in new
chr20	5536354	5536549
#Deleted in new
chr20	5710867	5711021
#Deleted in new
chr20	5798587	5798819
#Deleted in new
chr20	5889513	5889672
#Deleted in new
chr20	6825839	6826025
#Deleted in new
chr20	7093479	7093607
#Deleted in new
chr20	8201612	8201843
#Duplicated in new
chr20	8273665	8273853
#Deleted in new
chr20	8381730	8381883
#Deleted in new
chr20	8821618	8821791
#Deleted in new
chr20	8857896	8858064
#Deleted in new
chr20	9484778	9485010
#Duplicated in new
chr20	12575392	12575701
#Partially deleted in new
chr20	15072312	15072543
#Deleted in new
chr20	18426360	18426485
#Deleted in new
chr20	19232976	19233171
#Deleted in new
chr20	24426595	24426823
#Deleted in new
chr20	25759765	25759892
#Deleted in new
chr20	27057092	27057217
#Partially deleted in new
chr20	27206325	27206450
#Deleted in new
chr20	30986325	30986450
#Deleted in new
chr20	31340316	31340526
#Deleted in new
chr20	32110623	32110756
#Deleted in new
chr20	32279006	32279180
#Deleted in new
chr20	36307723	36307988
#Deleted in new
chr20	36515830	36516007
#Deleted in new
chr20	36527791	36528012
#Deleted in new
chr20	36707421	36707897
#Deleted in new
chr20	36838054	36838195
#Deleted in new
chr20	36838265	36838531
#Deleted in new
chr20	36913310	36913563
#Deleted in new
chr20	37477684	37477922
#Deleted in new
chr20	37524942	37525089
#Deleted in new
chr20	37590195	37590358
#Deleted in new
chr20	38148053	38148237
#Deleted in new
chr20	39670460	39670625
#Deleted in new
chr20	39792787	39793233
#Deleted in new
chr20	40259740	40259927
#Deleted in new
chr20	40741439	40741619
#Deleted in new
chr20	40797655	40797862
#Deleted in new
chr20	40845186	40845405
#Deleted in new
chr20	40943343	40943472
#Deleted in new
chr20	41211453	41211626
#Deleted in new
chr20	41422979	41423114
#Deleted in new
chr20	41520841	41521009
#Deleted in new
chr20	42132732	42132895
#Deleted in new
chr20	42150766	42150933
#Deleted in new
chr20	42204962	42205087
#Deleted in new
chr20	42287242	42287479
#Partially deleted in new
chr20	42820303	42820428
#Partially deleted in new
chr20	43341681	43341933
#Deleted in new
chr20	43516606	43516840
#Partially deleted in new
chr20	43694348	43694521
#Duplicated in new
chr20	43694783	43695010
#Deleted in new
chr20	43728889	43729101
#Deleted in new
chr20	44027504	44027640
#Deleted in new
chr20	44620294	44620419
#Deleted in new
chr20	45345938	45346171
#Deleted in new
chr20	45348017	45348273
#Partially deleted in new
chr20	45539827	45539988
#Deleted in new
chr20	45635526	45635759
#Partially deleted in new
chr20	45767622	45767871
#Deleted in new
chr20	46000292	46000470
#Deleted in new
chr20	46402203	46402343
#Deleted in new
chr20	46426701	46426836
#Deleted in new
chr20	46584881	46585097
#Duplicated in new
chr20	46610819	46610944
#Deleted in new
chr20	47048106	47048356
#Deleted in new
chr20	47720609	47720760
#Partially deleted in new
chr20	48016591	48016716
#Deleted in new
chr20	48102531	48102656
#Deleted in new
chr20	48191079	48191258
#Deleted in new
chr20	48254672	48254933
#Partially deleted in new
chr20	48264178	48264352
#Partially deleted in new
chr20	48295865	48296036
#Deleted in new
chr20	48388234	48388476
#Deleted in new
chr20	48469930	48470116
#Deleted in new
chr20	48589918	48590093
#Deleted in new
chr20	48661124	48661420
#Deleted in new
chr20	48735341	48735517
#Deleted in new
chr20	48755513	48755719
#Deleted in new
chr20	49027041	49027347
#Deleted in new
chr20	49027547	49027905
#Deleted in new
chr20	49456452	49456793
#Partially deleted in new
chr20	49517794	49518000
#Deleted in new
chr20	49764332	49764591
#Deleted in new
chr20	49774586	49774859
#Duplicated in new
chr20	49802755	49803108
#Partially deleted in new
chr20	49821677	49821823
#Deleted in new
chr20	50001614	50001951
#Partially deleted in new
chr20	50176941	50177081
#Deleted in new
chr20	50739688	50739813
#Deleted in new
chr20	50741170	50741413
#Deleted in new
chr20	50967979	50968104
#Deleted in new
chr20	50968172	50968426
#Deleted in new
chr20	51046429	51046721
#Deleted in new
chr20	51194499	51194883
#Deleted in new
chr20	51414318	51414443
#Deleted in new
chr20	51437150	51437322
#Deleted in new
chr20	51527106	51527374
#Deleted in new
chr20	51844341	51844508
#Deleted in new
chr20	51976683	51976953
#Deleted in new
chr20	52167250	52167483
#Deleted in new
chr20	52178939	52179168
#Deleted in new
chr20	52199625	52199832
#Deleted in new
chr20	52230331	52230513
#Deleted in new
chr20	52511053	52511523
#Deleted in new
chr20	52529428	52529698
#Partially deleted in new
chr20	52658186	52658371
#Deleted in new
chr20	52695783	52695944
#Deleted in new
chr20	52842860	52842985
#Deleted in new
chr20	52859078	52859355
#Deleted in new
chr20	52872512	52872810
#Deleted in new
chr20	52925591	52925759
#Deleted in new
chr20	52975930	52976055
#Deleted in new
chr20	53183418	53183592
#Partially deleted in new
chr20	53377321	53377490
#Deleted in new
chr20	53602749	53602889
#Deleted in new
chr20	53619537	53619774
#Deleted in new
chr20	53700102	53700405
#Deleted in new
chr20	53700504	53700629
#Deleted in new
chr20	53841006	53841602
#Deleted in new
chr20	53996056	53996316
#Deleted in new
chr20	53996402	53996527
#Partially deleted in new
chr20	54061593	54061816
#Deleted in new
chr20	54085305	54085503
#Deleted in new
chr20	54440038	54440168
#Deleted in new
chr20	54801502	54801638
#Deleted in new
chr20	54964061	54964254
#Deleted in new
chr20	54965642	54965796
#Deleted in new
chr20	55112915	55113040
#Deleted in new
chr20	55162976	55163120
#Deleted in new
chr20	55212860	55213005
#Deleted in new
chr20	55317748	55318025
#Deleted in new
chr20	55382049	55382241
#Deleted in new
chr20	55451285	55451411
#Deleted in new
chr20	55557628	55557860
#Deleted in new
chr20	55564381	55564546
#Duplicated in new
chr20	55574731	55575015
#Deleted in new
chr20	55603447	55603611
#Deleted in new
chr20	55743071	55743320
#Partially deleted in new
chr20	55750742	55750928
#Partially deleted in new
chr20	55770444	55770674
#Deleted in new
chr20	55772585	55772757
#Deleted in new
chr20	56005984	56006239
#Deleted in new
chr20	56172345	56172592
#Deleted in new
chr20	56180085	56180319
#Deleted in new
chr20	56452811	56452988
#Deleted in new
chr20	56509955	56510176
#Deleted in new
chr20	56510241	56510366
#Deleted in new
chr20	56528920	56529070
#Duplicated in new
chr20	56532939	56533413
#Deleted in new
chr20	56574975	56575100
#Deleted in new
chr20	56631883	56632028
#Deleted in new
chr20	56634219	56634354
#Deleted in new
chr20	56838746	56838941
#Deleted in new
chr20	56885719	56885917
#Deleted in new
chr20	56952348	56952533
#Deleted in new
chr20	56984697	56984822
#Deleted in new
chr20	57332857	57332982
#Deleted in new
chr21	864078	864225
#Deleted in new
chr21	2118099	2118224
#Deleted in new
chr21	3618223	3618432
#Deleted in new
chr21	4477940	4478085
#Deleted in new
chr21	6313004	6313156
#Deleted in new
chr21	6872827	6873020
#Deleted in new
chr21	6991470	6991598
#Deleted in new
chr21	7065387	7065512
#Deleted in new
chr21	8391656	8391840
#Deleted in new
chr21	12623615	12623829
#Deleted in new
chr21	12665841	12666029
#Partially deleted in new
chr21	13355360	13355502
#Deleted in new
chr21	13775714	13775839
#Deleted in new
chr21	15929938	15930082
#Partially deleted in new
chr21	16082342	16082566
#Deleted in new
chr21	16191844	16192068
#Deleted in new
chr21	16542551	16542733
#Deleted in new
chr21	16756697	16756872
#Partially deleted in new
chr21	17915189	17915314
#Deleted in new
chr21	19241786	19242033
#Deleted in new
chr21	21045587	21045718
#Deleted in new
chr21	21278355	21278483
#Deleted in new
chr21	21777075	21777200
#Partially deleted in new
chr21	22203145	22203310
#Deleted in new
chr21	23179191	23179450
#Deleted in new
chr21	23587289	23587507
#Deleted in new
chr21	24498744	24498909
#Deleted in new
chr21	24512891	24513137
#Deleted in new
chr21	24513235	24513360
#Deleted in new
chr21	24778108	24778241
#Deleted in new
chr21	25055285	25055421
#Deleted in new
chr21	25171033	25171164
#Deleted in new
chr21	25431648	25431831
#Deleted in new
chr21	25489930	25490055
#Deleted in new
chr21	25927324	25927497
#Deleted in new
chr21	25936816	25937118
#Deleted in new
chr21	26106715	26106956
#Deleted in new
chr21	27799474	27799599
#Deleted in new
chr21	28464138	28464358
#Deleted in new
chr21	28494588	28494776
#Deleted in new
chr21	28630530	28630656
#Deleted in new
chr21	28708732	28708909
#Deleted in new
chr21	29454105	29454230
#Deleted in new
chr21	29516883	29517008
#Deleted in new
chr21	31205212	31205356
#Deleted in new
chr21	31854654	31854791
#Partially deleted in new
chr21	32856481	32856697
#Deleted in new
chr21	32916356	32916505
#Split in new
chr21	33901154	33901461
#Deleted in new
chr21	34093536	34093669
#Deleted in new
chr21	34260856	34261020
#Deleted in new
chr21	34282953	34283160
#Duplicated in new
chr21	35947211	35947437
#Deleted in new
chr21	37233012	37233162
#Deleted in new
chr21	37411404	37411541
#Deleted in new
chr21	37542268	37542398
#Deleted in new
chr21	39675555	39675777
#Deleted in new
chr21	39861750	39861875
#Deleted in new
chr21	39921892	39922096
#Partially deleted in new
chr21	39922252	39922432
#Deleted in new
chr21	41167325	41167532
#Partially deleted in new
chr21	42045459	42045584
#Deleted in new
chr21	42457422	42457547
#Deleted in new
chr21	43149694	43149819
#Partially deleted in new
chr21	44255027	44255156
#Partially deleted in new
chr21	47520046	47520171
#Partially deleted in new
chr21	47611049	47611291
#Deleted in new
chr21	50287703	50287921
#Deleted in new
chr21	50427990	50428115
#Deleted in new
chr22	137644	137854
#Deleted in new
chr22	941628	941800
#Deleted in new
chr22	1626622	1626836
#Deleted in new
chr22	2052584	2052780
#Deleted in new
chr22	2248181	2248354
#Deleted in new
chr22	2347893	2348146
#Deleted in new
chr22	2471052	2471297
#Deleted in new
chr22	3268318	3268495
#Partially deleted in new
chr22	4739416	4739571
#Deleted in new
chr22	4913563	4913777
#Deleted in new
chr22	6002889	6003014
#Deleted in new
chr22	7826394	7826539
#Deleted in new
chr22	8196067	8196244
#Deleted in new
chr22	9323134	9323316
#Deleted in new
chr22	9404194	9404446
#Deleted in new
chr22	9414485	9414726
#Deleted in new
chr22	9525752	9525877
#Deleted in new
chr22	25685103	25685426
#Deleted in new
chr22	29257112	29257239
#Deleted in new
chr22	29929326	29929563
#Partially deleted in new
chr22	30376673	30376820
#Deleted in new
chr22	30540646	30540793
#Deleted in new
chr22	32645399	32645619
#Deleted in new
chr22	41870182	41870354
#Partially deleted in new
chr22	42319473	42319706
#Deleted in new
chr22	45930246	45930479
#Deleted in new
chr22	46294422	46294721
#Deleted in new
chr22	48221204	48221329
#Deleted in new
chr22	48221389	48221580
#Deleted in new
chr22	49223826	49223971
#Deleted in new
chr22	49232118	49232284
#Deleted in new
chr22	49238704	49238916
#Deleted in new
chr22	49260681	49260814
#Deleted in new
chr22	49618932	49619108
#Deleted in new
chr22	49992034	49992215
#Deleted in new
chr22	49994707	49994833
#Deleted in new
chr22	53196007	53196218
#Deleted in new
chr22	58302356	58302481
#Deleted in new
chr22	58318352	58318554
#Deleted in new
chr22	58318705	58318830
#Deleted in new
chr22	58468098	58468245
#Deleted in new
chr22	58843215	58843340
#Deleted in new
chr22	58877081	58877276
#Deleted in new
chr22	58929361	58929571
#Deleted in new
chr22	59174659	59174829
#Deleted in new
chr22	60398828	60399011
#Deleted in new
chr22	60545911	60546089
#Deleted in new
chr22	60729023	60729178
#Deleted in new
chr22	61078916	61079119
#Deleted in new
chr22	61122787	61123013
#Deleted in new
chr22	61318827	61318952
#Deleted in new
chr23	27943	28151
#Deleted in new
chr23	119152	119277
#Deleted in new
chr23	378525	378650
#Deleted in new
chr23	381742	381956
#Deleted in new
chr23	920825	920974
#Partially deleted in new
chr23	1184718	1184843
#Deleted in new
chr23	1369134	1369297
#Deleted in new
chr23	1388473	1388650
#Deleted in new
chr23	1845983	1846165
#Deleted in new
chr23	1894301	1894596
#Deleted in new
chr23	3133675	3133832
#Deleted in new
chr23	3868782	3868970
#Deleted in new
chr23	3980842	3981005
#Deleted in new
chr23	7037537	7037828
#Deleted in new
chr23	7052112	7052253
#Partially deleted in new
chr23	7155518	7155734
#Deleted in new
chr23	7627182	7627321
#Deleted in new
chr23	8118539	8118782
#Deleted in new
chr23	8206244	8206386
#Deleted in new
chr23	8898234	8898474
#Deleted in new
chr23	9381775	9381952
#Deleted in new
chr23	10115749	10115962
#Deleted in new
chr23	11400556	11400684
#Deleted in new
chr23	11535459	11535634
#Deleted in new
chr23	11739657	11739812
#Deleted in new
chr23	12000953	12001218
#Deleted in new
chr23	12020872	12021042
#Partially deleted in new
chr23	12325317	12325488
#Deleted in new
chr23	16058957	16059082
#Deleted in new
chr23	17845353	17845478
#Deleted in new
chr23	18281120	18281269
#Deleted in new
chr23	19754493	19754709
#Deleted in new
chr23	20738818	20739056
#Deleted in new
chr23	21374529	21374658
#Deleted in new
chr23	21467650	21467859
#Deleted in new
chr23	23157345	23157470
#Deleted in new
chr23	25319329	25319592
#Deleted in new
chr23	27402789	27402982
#Deleted in new
chr23	27735937	27736074
#Deleted in new
chr23	28414816	28414954
#Deleted in new
chr23	29343441	29343698
#Deleted in new
chr23	29632126	29632259
#Deleted in new
chr23	29734588	29734883
#Deleted in new
chr23	30151468	30151595
#Deleted in new
chr23	30928949	30929074
#Deleted in new
chr23	33481051	33481217
#Deleted in new
chr23	34187938	34188119
#Deleted in new
chr23	34541907	34542125
#Deleted in new
chr23	34901088	34901246
#Deleted in new
chr23	35015887	35016080
#Deleted in new
chr23	35060297	35060422
#Deleted in new
chr23	37542578	37542775
#Deleted in new
chr23	41068853	41068978
#Partially deleted in new
chr23	41753248	41753399
#Deleted in new
chr23	41863819	41864120
#Deleted in new
chr23	43544133	43544570
#Deleted in new
chr23	43752495	43752748
#Deleted in new
chr23	44120289	44120526
#Deleted in new
chr23	44492274	44492624
#Deleted in new
chr23	44574472	44574780
#Deleted in new
chr23	44587140	44587302
#Deleted in new
chr23	45182546	45182984
#Deleted in new
chr23	45245382	45245639
#Deleted in new
chr23	45332399	45332635
#Deleted in new
chr23	46324061	46324274
#Deleted in new
chr23	47605261	47605478
#Deleted in new
chr23	48770292	48770527
#Deleted in new
chr24	2629735	2629985
#Partially deleted in new
chr24	2801537	2801682
#Deleted in new
chr24	3569788	3570012
#Deleted in new
chr24	3583429	3583623
#Deleted in new
chr24	5414810	5415022
#Deleted in new
chr24	5538600	5538826
#Partially deleted in new
chr24	5564906	5565077
#Deleted in new
chr24	6055997	6056163
#Deleted in new
chr24	6197175	6197432
#Deleted in new
chr24	7140797	7140922
#Deleted in new
chr24	11444374	11444525
#Deleted in new
chr24	11871911	11872036
#Deleted in new
chr24	11936995	11937153
#Deleted in new
chr24	12882344	12882528
#Deleted in new
chr24	14073410	14073543
#Deleted in new
chr24	14135150	14135401
#Deleted in new
chr24	15990731	15991071
#Deleted in new
chr24	17330063	17330191
#Partially deleted in new
chr24	17466335	17466478
#Deleted in new
chr24	17945760	17945983
#Partially deleted in new
chr24	18074233	18074358
#Partially deleted in new
chr24	18123958	18124083
#Deleted in new
chr24	18315332	18315457
#Deleted in new
chr24	18383770	18383944
#Deleted in new
chr24	20080163	20080293
#Deleted in new
chr24	20458305	20458491
#Deleted in new
chr24	20476064	20476267
#Deleted in new
chr24	20503644	20503911
#Deleted in new
chr24	20733879	20734086
#Deleted in new
chr24	20748231	20748441
#Deleted in new
chr24	20936356	20936538
#Deleted in new
chr24	20953553	20953864
#Deleted in new
chr24	22081362	22081547
#Deleted in new
chr24	22241107	22241482
#Deleted in new
chr24	22646231	22646443
#Deleted in new
chr24	22729409	22729553
#Deleted in new
chr24	22744673	22744830
#Deleted in new
chr24	23108666	23108863
#Deleted in new
chr24	23506435	23506652
#Deleted in new
chr24	24121434	24121559
#Deleted in new
chr24	24197638	24197812
#Deleted in new
chr24	24700265	24700405
#Deleted in new
chr24	24833740	24833887
#Deleted in new
chr24	25640073	25640222
#Deleted in new
chr24	25762966	25763169
#Deleted in new
chr24	25922992	25923124
#Deleted in new
chr24	26051316	26051445
#Deleted in new
chr24	26598254	26598414
#Deleted in new
chr24	26891542	26891697
#Deleted in new
chr24	26924679	26924914
#Deleted in new
chr24	27436693	27436818
#Deleted in new
chr24	27601143	27601278
#Deleted in new
chr24	27783943	27784068
#Deleted in new
chr24	29642833	29643000
#Deleted in new
chr24	31305571	31305759
#Deleted in new
chr24	31387041	31387280
#Deleted in new
chr24	31752137	31752262
#Deleted in new
chr24	31939458	31939636
#Deleted in new
chr24	32179046	32179171
#Deleted in new
chr24	32179215	32179366
#Deleted in new
chr24	32562609	32562873
#Partially deleted in new
chr24	32704913	32705055
#Deleted in new
chr24	32743044	32743260
#Partially deleted in new
chr24	32999126	32999394
#Deleted in new
chr24	33640413	33640586
#Deleted in new
chr24	33731873	33732093
#Deleted in new
chr24	33775101	33775376
#Deleted in new
chr24	34495919	34496053
#Deleted in new
chr24	34646421	34646550
#Deleted in new
chr24	35883371	35883553
#Deleted in new
chr24	35905220	35905345
#Deleted in new
chr24	35910459	35910584
#Deleted in new
chr24	36207021	36207261
#Partially deleted in new
chr24	39399739	39399883
#Deleted in new
chr24	41606756	41606881
#Deleted in new
chr24	41718904	41719110
#Deleted in new
chr24	42362021	42362146
#Deleted in new
chr24	42388106	42388231
#Deleted in new
chr24	42998605	42998730
#Deleted in new
chr24	44196821	44196978
#Deleted in new
chr24	46131055	46131269
#Deleted in new
chr24	46204786	46204995
#Partially deleted in new
chr24	46729217	46729342
#Deleted in new
chr24	47643228	47643672
#Duplicated in new
chr25	391136	391312
#Deleted in new
chr25	505659	505807
#Deleted in new
chr25	1246343	1246468
#Deleted in new
chr25	1557414	1557561
#Partially deleted in new
chr25	2553723	2553852
#Deleted in new
chr25	4207071	4207293
#Duplicated in new
chr25	6919274	6919440
#Deleted in new
chr25	7097118	7097293
#Deleted in new
chr25	7334904	7335058
#Deleted in new
chr25	9606016	9606142
#Partially deleted in new
chr25	9766911	9767187
#Deleted in new
chr25	11132701	11132826
#Partially deleted in new
chr25	11147783	11147977
#Deleted in new
chr25	11211657	11211863
#Deleted in new
chr25	11395663	11395788
#Deleted in new
chr25	13583324	13583453
#Deleted in new
chr25	14655310	14655496
#Deleted in new
chr25	15307396	15307653
#Deleted in new
chr25	15600724	15600849
#Deleted in new
chr25	15700421	15700580
#Deleted in new
chr25	16618123	16618259
#Deleted in new
chr25	17144563	17144710
#Partially deleted in new
chr25	17589896	17590041
#Deleted in new
chr25	17984428	17984611
#Duplicated in new
chr25	18039755	18040007
#Deleted in new
chr25	18134831	18134956
#Duplicated in new
chr25	18203044	18203252
#Deleted in new
chr25	18214744	18214869
#Deleted in new
chr25	18275176	18275301
#Deleted in new
chr25	18954448	18954641
#Deleted in new
chr25	19055872	19056134
#Deleted in new
chr25	19385186	19385311
#Deleted in new
chr25	19566139	19566320
#Partially deleted in new
chr25	19625609	19625837
#Partially deleted in new
chr25	20159728	20159853
#Deleted in new
chr25	20334681	20334822
#Deleted in new
chr25	20519020	20519166
#Deleted in new
chr25	20523323	20523505
#Deleted in new
chr25	22961513	22961701
#Deleted in new
chr25	22962780	22962905
#Deleted in new
chr25	25522724	25522852
#Partially deleted in new
chr25	25971256	25971779
#Partially deleted in new
chr25	26034437	26034668
#Deleted in new
chr25	26313801	26314055
#Deleted in new
chr25	26501914	26502114
#Deleted in new
chr25	27111050	27111374
#Deleted in new
chr25	27377518	27377643
#Partially deleted in new
chr25	28816963	28817088
#Deleted in new
chr25	29239130	29239318
#Deleted in new
chr25	29890530	29890660
#Deleted in new
chr25	30064266	30064565
#Deleted in new
chr25	31019801	31020032
#Partially deleted in new
chr25	31264435	31264569
#Deleted in new
chr25	33726730	33726855
#Deleted in new
chr25	34235960	34236132
#Deleted in new
chr25	34344903	34345107
#Deleted in new
chr25	34975356	34975632
#Deleted in new
chr25	35211149	35211301
#Deleted in new
chr25	37040458	37040721
#Deleted in new
chr25	37111467	37111604
#Deleted in new
chr25	37177147	37177382
#Deleted in new
chr25	37359258	37359475
#Deleted in new
chr25	37577977	37578174
#Deleted in new
chr25	38963020	38963214
#Deleted in new
chr25	40438130	40438255
#Deleted in new
chr25	42371463	42371588
#Deleted in new
chr25	42949545	42949814
#Deleted in new
chr25	43302584	43302812
#Deleted in new
chr25	43302937	43303062
#Deleted in new
chr25	43382203	43382364
#Deleted in new
chr25	43390273	43390398
#Deleted in new
chr25	43392429	43392671
#Deleted in new
chr25	43459663	43459850
#Deleted in new
chr25	43520221	43520409
#Partially deleted in new
chr25	43669947	43670072
#Deleted in new
chr25	43671105	43671303
#Deleted in new
chr25	44237071	44237462
#Deleted in new
chr25	44238080	44238205
#Deleted in new
chr25	44240190	44240393
#Deleted in new
chr25	45806914	45807114
#Deleted in new
chr25	46206248	46206443
#Deleted in new
chr25	47407012	47407236
#Deleted in new
chr25	48598909	48599043
#Deleted in new
chr25	48775389	48775628
#Deleted in new
chr25	48897144	48897387
#Deleted in new
chr25	49542354	49542479
#Deleted in new
chr25	51067847	51067991
#Deleted in new
chr25	51122855	51123028
#Deleted in new
chr25	51313370	51313505
#Deleted in new
chr25	51448382	51448507
#Deleted in new
chr26	308586	308711
#Deleted in new
chr26	533069	533209
#Deleted in new
chr26	551748	551930
#Deleted in new
chr26	796698	796939
#Deleted in new
chr26	841757	841911
#Deleted in new
chr26	998928	999091
#Deleted in new
chr26	1180650	1180839
#Deleted in new
chr26	1421428	1421667
#Partially deleted in new
chr26	1450724	1450849
#Deleted in new
chr26	1458543	1458693
#Deleted in new
chr26	1491300	1491425
#Deleted in new
chr26	2802878	2803082
#Deleted in new
chr26	4840352	4840503
#Deleted in new
chr26	4994381	4994622
#Deleted in new
chr26	5028614	5028859
#Deleted in new
chr26	5130134	5130325
#Deleted in new
chr26	5905810	5906036
#Deleted in new
chr26	5906842	5907007
#Deleted in new
chr26	7402585	7402728
#Partially deleted in new
chr26	7602654	7602952
#Duplicated in new
chr26	7685448	7685633
#Deleted in new
chr26	7806276	7806452
#Deleted in new
chr26	8482283	8482505
#Deleted in new
chr26	8902110	8902252
#Deleted in new
chr26	9025385	9025510
#Deleted in new
chr26	9321958	9322095
#Deleted in new
chr26	9373064	9373297
#Deleted in new
chr26	9677547	9677695
#Deleted in new
chr26	9706384	9706651
#Partially deleted in new
chr26	9958186	9958311
#Deleted in new
chr26	9961184	9961321
#Partially deleted in new
chr26	10463357	10463504
#Partially deleted in new
chr26	10677191	10677338
#Deleted in new
chr26	10696271	10696659
#Partially deleted in new
chr26	12989509	12989677
#Deleted in new
chr26	13326765	13326909
#Deleted in new
chr26	13343959	13344084
#Deleted in new
chr26	13777862	13777987
#Deleted in new
chr26	16071434	16071561
#Partially deleted in new
chr26	16212582	16212814
#Deleted in new
chr26	17110357	17110492
#Partially deleted in new
chr26	17245960	17246117
#Deleted in new
chr26	17982863	17983002
#Deleted in new
chr26	19164711	19164936
#Deleted in new
chr26	19165035	19165168
#Deleted in new
chr26	19167217	19167440
#Duplicated in new
chr26	19312036	19312480
#Deleted in new
chr26	20168653	20168788
#Deleted in new
chr26	22028490	22028630
#Deleted in new
chr26	22044668	22044793
#Partially deleted in new
chr26	22640769	22640960
#Deleted in new
chr26	23688908	23689174
#Deleted in new
chr26	23950023	23950148
#Deleted in new
chr26	24210417	24210542
#Deleted in new
chr26	24388862	24389009
#Deleted in new
chr26	24558318	24558455
#Deleted in new
chr26	24576648	24576792
#Deleted in new
chr26	24641071	24641211
#Duplicated in new
chr26	27050539	27050721
#Deleted in new
chr26	27657407	27657644
#Deleted in new
chr26	27661201	27661403
#Deleted in new
chr26	27662743	27662925
#Deleted in new
chr26	27720609	27720801
#Deleted in new
chr26	27939466	27939752
#Deleted in new
chr26	28050709	28050867
#Deleted in new
chr26	28421382	28421625
#Duplicated in new
chr26	28531414	28531539
#Deleted in new
chr26	28596819	28597036
#Deleted in new
chr26	28599712	28599895
#Deleted in new
chr26	28763452	28763590
#Deleted in new
chr26	28821730	28821857
#Deleted in new
chr26	29031321	29031495
#Deleted in new
chr26	29063047	29063200
#Deleted in new
chr26	29210830	29210978
#Deleted in new
chr26	29290598	29290879
#Deleted in new
chr26	30015224	30015446
#Deleted in new
chr26	30019074	30019300
#Deleted in new
chr26	30225316	30225489
#Deleted in new
chr26	30383029	30383365
#Deleted in new
chr26	30419701	30420080
#Deleted in new
chr26	30861664	30861805
#Deleted in new
chr26	31035026	31035151
#Partially deleted in new
chr26	31065687	31065887
#Deleted in new
chr26	31141411	31141651
#Deleted in new
chr26	34879124	34879367
#Deleted in new
chr26	35725987	35726266
#Deleted in new
chr26	37387136	37387269
#Deleted in new
chr26	37603813	37603950
#Deleted in new
chr26	38700248	38700373
#Deleted in new
chr26	38765932	38766159
#Deleted in new
chr27	244620	244832
#Deleted in new
chr27	1821934	1822112
#Deleted in new
chr27	1828606	1828763
#Deleted in new
chr27	1828894	1829056
#Deleted in new
chr27	1868644	1868771
#Partially deleted in new
chr27	2040539	2040689
#Deleted in new
chr27	3550278	3550428
#Deleted in new
chr27	3573188	3573352
#Partially deleted in new
chr27	3680767	3680894
#Deleted in new
chr27	3845189	3845347
#Deleted in new
chr27	3905161	3905286
#Deleted in new
chr27	3908727	3908852
#Deleted in new
chr27	3927530	3927663
#Deleted in new
chr27	3937262	3937387
#Deleted in new
chr27	3962410	3962617
#Deleted in new
chr27	4428554	4428702
#Deleted in new
chr27	4710934	4711089
#Deleted in new
chr27	5169460	5169586
#Deleted in new
chr27	6094676	6094809
#Deleted in new
chr27	6340516	6340641
#Deleted in new
chr27	7214898	7215151
#Deleted in new
chr27	8270651	8270812
#Deleted in new
chr27	11628025	11628150
#Deleted in new
chr27	11628192	11628439
#Deleted in new
chr27	13279890	13280038
#Deleted in new
chr27	13689006	13689141
#Deleted in new
chr27	15194258	15194383
#Deleted in new
chr27	16218762	16218921
#Deleted in new
chr27	16414070	16414364
#Partially deleted in new
chr27	16530416	16530541
#Deleted in new
chr27	17136317	17136603
#Partially deleted in new
chr27	17173675	17173882
#Deleted in new
chr27	17284403	17284727
#Partially deleted in new
chr27	17292066	17292198
#Deleted in new
chr27	17470420	17470556
#Deleted in new
chr27	17491947	17492146
#Deleted in new
chr27	17791290	17791415
#Deleted in new
chr27	19023681	19023814
#Deleted in new
chr27	20562113	20562266
#Partially deleted in new
chr27	20604735	20605046
#Deleted in new
chr27	20858593	20858718
#Deleted in new
chr27	24684990	24685159
#Partially deleted in new
chr27	26631912	26632037
#Deleted in new
chr27	26817326	26817523
#Deleted in new
chr27	27700141	27700266
#Deleted in new
chr27	27870724	27870955
#Deleted in new
chr27	29051786	29051937
#Deleted in new
chr27	29400944	29401157
#Deleted in new
chr27	30440503	30440775
#Partially deleted in new
chr27	30605457	30605582
#Deleted in new
chr27	30824209	30824424
#Partially deleted in new
chr27	30871998	30872215
#Deleted in new
chr27	31554660	31554785
#Partially deleted in new
chr27	32273150	32273275
#Deleted in new
chr27	32290088	32290213
#Deleted in new
chr27	33356091	33356321
#Deleted in new
chr27	34634263	34634531
#Deleted in new
chr27	34645926	34646081
#Deleted in new
chr27	35032641	35032774
#Deleted in new
chr27	35964999	35965134
#Partially deleted in new
chr27	36208167	36208452
#Deleted in new
chr27	36254683	36254919
#Deleted in new
chr27	36380356	36380583
#Deleted in new
chr27	36481307	36481544
#Deleted in new
chr27	36511393	36511518
#Deleted in new
chr27	36907860	36908069
#Deleted in new
chr27	37176068	37176336
#Deleted in new
chr27	37176451	37176678
#Deleted in new
chr27	37182435	37182734
#Deleted in new
chr27	37234689	37234973
#Deleted in new
chr27	37584916	37585061
#Deleted in new
chr27	37602913	37603081
#Deleted in new
chr27	37603690	37603873
#Deleted in new
chr27	38218526	38218669
#Deleted in new
chr27	38297473	38297598
#Deleted in new
chr27	39824445	39824657
#Deleted in new
chr27	43028973	43029100
#Deleted in new
chr27	43065531	43065670
#Deleted in new
chr27	43075895	43076020
#Deleted in new
chr27	43772416	43772566
#Deleted in new
chr27	43814081	43814206
#Deleted in new
chr27	43933117	43933316
#Deleted in new
chr27	43966251	43966412
#Partially deleted in new
chr27	44738183	44738487
#Deleted in new
chr27	45255441	45255746
#Deleted in new
chr27	45364872	45365077
#Deleted in new
chr27	45738637	45738767
#Deleted in new
chr28	1018365	1018490
#Deleted in new
chr28	1381725	1381895
#Deleted in new
chr28	1821988	1822113
#Deleted in new
chr28	1825408	1825533
#Deleted in new
chr28	1847434	1847559
#Deleted in new
chr28	1855276	1855401
#Deleted in new
chr28	1903140	1903270
#Deleted in new
chr28	2004112	2004562
#Deleted in new
chr28	2135630	2135785
#Deleted in new
chr28	2228619	2228872
#Deleted in new
chr28	2436242	2436529
#Deleted in new
chr28	3159283	3159408
#Deleted in new
chr28	3340079	3340301
#Partially deleted in new
chr28	3471842	3471993
#Deleted in new
chr28	3572551	3572748
#Deleted in new
chr28	3576373	3576534
#Deleted in new
chr28	3991717	3991990
#Deleted in new
chr28	4316552	4316737
#Deleted in new
chr28	4889817	4890092
#Deleted in new
chr28	6372136	6372644
#Deleted in new
chr28	6466330	6466462
#Deleted in new
chr28	6792460	6792588
#Deleted in new
chr28	6830268	6830393
#Deleted in new
chr28	6968900	6969189
#Deleted in new
chr28	7041935	7042086
#Deleted in new
chr28	7402758	7402903
#Deleted in new
chr28	8627270	8627397
#Duplicated in new
chr28	8699430	8699624
#Partially deleted in new
chr28	8767775	8767946
#Deleted in new
chr28	8788190	8788319
#Deleted in new
chr28	10135715	10135842
#Deleted in new
chr28	10143608	10143755
#Deleted in new
chr28	10163912	10164056
#Partially deleted in new
chr28	10629306	10629431
#Deleted in new
chr28	10630047	10630172
#Deleted in new
chr28	10935560	10935685
#Duplicated in new
chr28	12597665	12597881
#Deleted in new
chr28	13023164	13023289
#Partially deleted in new
chr28	14149722	14149865
#Deleted in new
chr28	14746452	14746624
#Deleted in new
chr28	14900082	14900207
#Deleted in new
chr28	15167472	15167671
#Deleted in new
chr28	15305826	15306036
#Deleted in new
chr28	15466649	15466846
#Partially deleted in new
chr28	15561632	15561763
#Deleted in new
chr28	15617259	15617389
#Deleted in new
chr28	15634876	15635066
#Deleted in new
chr28	16638921	16639122
#Partially deleted in new
chr28	16729419	16729632
#Deleted in new
chr28	18144772	18144901
#Deleted in new
chr28	18424432	18424640
#Partially deleted in new
chr28	21342510	21342737
#Deleted in new
chr28	21904988	21905113
#Partially deleted in new
chr28	22203516	22203653
#Deleted in new
chr28	22620465	22620590
#Partially deleted in new
chr28	23407198	23407329
#Deleted in new
chr28	24609664	24609851
#Partially deleted in new
chr28	25467927	25468094
#Deleted in new
chr28	26250927	26251145
#Deleted in new
chr28	29250881	29251006
#Deleted in new
chr28	29251055	29251298
#Deleted in new
chr28	29500819	29500944
#Deleted in new
chr28	31774997	31775275
#Deleted in new
chr28	32203956	32204126
#Deleted in new
chr28	33803701	33803832
#Deleted in new
chr28	34266883	34267064
#Deleted in new
chr28	34561512	34561689
#Deleted in new
chr28	34978706	34978974
#Deleted in new
chr28	35927554	35927679
#Deleted in new
chr28	38170271	38170493
#Deleted in new
chr28	39961802	39961988
#Deleted in new
chr28	40872012	40872137
#Deleted in new
chr28	41091830	41092043
#Deleted in new
chr29	331579	331902
#Deleted in new
chr29	514577	514843
#Deleted in new
chr29	1909230	1909436
#Deleted in new
chr29	3429861	3429986
#Deleted in new
chr29	3651367	3651615
#Deleted in new
chr29	3783793	3783926
#Partially deleted in new
chr29	3887813	3888062
#Partially deleted in new
chr29	3903941	3904091
#Partially deleted in new
chr29	5733282	5733452
#Partially deleted in new
chr29	6424318	6424443
#Deleted in new
chr29	7637953	7638078
#Partially deleted in new
chr29	8857696	8857847
#Deleted in new
chr29	8869821	8869946
#Deleted in new
chr29	9440702	9440929
#Deleted in new
chr29	13313791	13313955
#Partially deleted in new
chr29	14551564	14551801
#Deleted in new
chr29	15140817	15140961
#Deleted in new
chr29	15382098	15382223
#Deleted in new
chr29	16399004	16399187
#Deleted in new
chr29	16617081	16617207
#Deleted in new
chr29	19292250	19292376
#Deleted in new
chr29	19778542	19778803
#Partially deleted in new
chr29	19812025	19812153
#Deleted in new
chr29	21053307	21053582
#Deleted in new
chr29	22323174	22323362
#Deleted in new
chr29	22525420	22525577
#Deleted in new
chr29	22527595	22527738
#Deleted in new
chr29	24410599	24410724
#Partially deleted in new
chr29	24443134	24443314
#Partially deleted in new
chr29	27561593	27561815
#Deleted in new
chr29	28769464	28769631
#Deleted in new
chr29	28872969	28873103
#Partially deleted in new
chr29	31724080	31724205
#Partially deleted in new
chr29	31947705	31947886
#Deleted in new
chr29	32160447	32160578
#Deleted in new
chr29	32223105	32223361
#Deleted in new
chr29	32443136	32443265
#Deleted in new
chr29	33828159	33828313
#Deleted in new
chr29	38715656	38715947
#Partially deleted in new
chr29	40749711	40749836
#Partially deleted in new
chr3	454541	454731
#Deleted in new
chr3	696175	696300
#Deleted in new
chr3	974874	975000
#Deleted in new
chr3	1843589	1843777
#Duplicated in new
chr3	2504188	2504379
#Deleted in new
chr3	2722248	2722416
#Deleted in new
chr3	3313366	3313509
#Deleted in new
chr3	3611891	3612081
#Deleted in new
chr3	8123603	8123754
#Deleted in new
chr3	9393819	9393975
#Deleted in new
chr3	9411008	9411201
#Deleted in new
chr3	12007638	12007823
#Deleted in new
chr3	13939390	13939525
#Deleted in new
chr3	13952665	13952875
#Deleted in new
chr3	14016619	14016788
#Deleted in new
chr3	14310050	14310193
#Deleted in new
chr3	15134408	15134539
#Deleted in new
chr3	16097543	16097743
#Deleted in new
chr3	17869938	17870116
#Deleted in new
chr3	18488620	18488745
#Deleted in new
chr3	18502385	18502558
#Deleted in new
chr3	18926949	18927163
#Deleted in new
chr3	21474386	21474615
#Partially deleted in new
chr3	21926068	21926206
#Deleted in new
chr3	25426510	25426662
#Deleted in new
chr3	26575723	26575852
#Deleted in new
chr3	26656263	26656702
#Deleted in new
chr3	26780534	26780717
#Partially deleted in new
chr3	26789129	26789345
#Partially deleted in new
chr3	29769067	29769329
#Deleted in new
chr3	30768032	30768158
#Partially deleted in new
chr3	30858576	30858727
#Deleted in new
chr3	31984977	31985249
#Deleted in new
chr3	32022527	32022847
#Deleted in new
chr3	32040105	32040232
#Deleted in new
chr3	32385414	32385596
#Partially deleted in new
chr3	33368828	33369026
#Deleted in new
chr3	33960740	33960883
#Deleted in new
chr3	35286933	35287254
#Deleted in new
chr3	36468429	36468646
#Deleted in new
chr3	37397470	37397699
#Partially deleted in new
chr3	37564991	37565282
#Deleted in new
chr3	37754779	37755011
#Partially deleted in new
chr3	37824827	37824952
#Deleted in new
chr3	39408041	39408227
#Deleted in new
chr3	39784287	39784478
#Deleted in new
chr3	40589028	40589256
#Partially deleted in new
chr3	41148411	41148547
#Deleted in new
chr3	41312778	41312903
#Deleted in new
chr3	41532833	41532958
#Deleted in new
chr3	42548307	42548574
#Partially deleted in new
chr3	42608196	42608321
#Deleted in new
chr3	44733933	44734132
#Deleted in new
chr3	45168984	45169142
#Deleted in new
chr3	46284822	46284956
#Deleted in new
chr3	47159168	47159306
#Deleted in new
chr3	48888238	48888416
#Deleted in new
chr3	48927028	48927153
#Partially deleted in new
chr3	51853663	51853856
#Deleted in new
chr3	52637216	52637353
#Deleted in new
chr3	52729914	52730185
#Deleted in new
chr3	52966992	52967126
#Deleted in new
chr3	53806865	53807004
#Deleted in new
chr3	53845344	53845570
#Partially deleted in new
chr3	53891784	53891909
#Deleted in new
chr3	53955557	53955714
#Deleted in new
chr3	53965443	53965578
#Partially deleted in new
chr3	54455135	54455295
#Deleted in new
chr3	54571252	54571381
#Deleted in new
chr3	54791404	54791539
#Deleted in new
chr3	54989088	54989318
#Deleted in new
chr3	55542643	55542810
#Deleted in new
chr3	55866881	55867026
#Deleted in new
chr3	56526613	56526764
#Deleted in new
chr3	57327593	57327740
#Deleted in new
chr3	57334506	57334661
#Deleted in new
chr3	57432209	57432442
#Deleted in new
chr3	57502088	57502246
#Partially deleted in new
chr3	57821864	57821989
#Partially deleted in new
chr3	58114872	58114997
#Deleted in new
chr3	58782330	58782637
#Duplicated in new
chr3	60044669	60045115
#Deleted in new
chr3	60202667	60202910
#Deleted in new
chr3	60208789	60208928
#Deleted in new
chr3	60265867	60266011
#Deleted in new
chr3	60853682	60853808
#Partially deleted in new
chr3	60983912	60984105
#Deleted in new
chr3	61390148	61390417
#Deleted in new
chr3	61502261	61502511
#Deleted in new
chr3	61717969	61718094
#Deleted in new
chr3	62124168	62124399
#Partially deleted in new
chr3	62671060	62671192
#Deleted in new
chr3	62866912	62867132
#Deleted in new
chr3	62927262	62927396
#Deleted in new
chr3	62947155	62947280
#Partially deleted in new
chr3	63470465	63470677
#Deleted in new
chr3	63969944	63970126
#Deleted in new
chr3	64311323	64311470
#Deleted in new
chr3	64502510	64502642
#Deleted in new
chr3	64515552	64515742
#Deleted in new
chr3	64932687	64932812
#Deleted in new
chr3	67417214	67417343
#Deleted in new
chr3	69278805	69279071
#Deleted in new
chr3	69390766	69390945
#Deleted in new
chr3	69497100	69497331
#Deleted in new
chr3	71239722	71239857
#Partially deleted in new
chr3	71852682	71852901
#Partially deleted in new
chr3	71892568	71892825
#Deleted in new
chr3	72339779	72339904
#Deleted in new
chr3	72560201	72560343
#Deleted in new
chr3	72689734	72689916
#Partially deleted in new
chr3	72728255	72728451
#Deleted in new
chr3	72773947	72774086
#Deleted in new
chr3	72786579	72786784
#Deleted in new
chr3	72924465	72924702
#Deleted in new
chr3	73975487	73975638
#Deleted in new
chr3	74061337	74061462
#Partially deleted in new
chr3	74274264	74274473
#Partially deleted in new
chr3	76186532	76186726
#Deleted in new
chr3	79620240	79620365
#Partially deleted in new
chr3	80585579	80585752
#Duplicated in new
chr3	81522301	81522601
#Deleted in new
chr3	82572396	82572651
#Deleted in new
chr3	82761383	82761539
#Partially deleted in new
chr3	83946377	83946645
#Deleted in new
chr3	84055601	84055780
#Deleted in new
chr3	84820807	84821083
#Deleted in new
chr3	85046224	85046349
#Deleted in new
chr3	91173648	91173803
#Deleted in new
chr3	91857428	91857563
#Deleted in new
chr30	2349233	2349360
#Partially deleted in new
chr30	2671018	2671217
#Deleted in new
chr30	3133866	3134063
#Deleted in new
chr30	3163097	3163253
#Deleted in new
chr30	5630997	5631209
#Deleted in new
chr30	6172982	6173161
#Deleted in new
chr30	7122905	7123170
#Deleted in new
chr30	7179323	7179448
#Deleted in new
chr30	7969070	7969217
#Deleted in new
chr30	8414494	8414667
#Partially deleted in new
chr30	8887929	8888081
#Partially deleted in new
chr30	9357606	9357832
#Deleted in new
chr30	11351576	11351833
#Deleted in new
chr30	11449098	11449404
#Deleted in new
chr30	11688487	11688732
#Deleted in new
chr30	15140110	15140235
#Deleted in new
chr30	15841369	15841503
#Deleted in new
chr30	15880003	15880251
#Duplicated in new
chr30	16146665	16146866
#Deleted in new
chr30	16706519	16706667
#Partially deleted in new
chr30	17117573	17117785
#Duplicated in new
chr30	17879988	17880222
#Deleted in new
chr30	18397116	18397319
#Partially deleted in new
chr30	19381926	19382112
#Deleted in new
chr30	20358677	20358802
#Deleted in new
chr30	21199987	21200183
#Deleted in new
chr30	23298654	23298831
#Deleted in new
chr30	23975662	23975787
#Deleted in new
chr30	24358766	24358891
#Deleted in new
chr30	26848776	26848978
#Deleted in new
chr30	27512120	27512281
#Deleted in new
chr30	27849482	27849723
#Deleted in new
chr30	28119328	28119524
#Deleted in new
chr30	28303136	28303261
#Deleted in new
chr30	28567046	28567171
#Deleted in new
chr30	28782740	28782907
#Deleted in new
chr30	29228396	29228694
#Deleted in new
chr30	29569465	29569713
#Deleted in new
chr30	29595666	29595862
#Deleted in new
chr30	29685742	29685929
#Deleted in new
chr30	29794835	29795031
#Deleted in new
chr30	30195248	30195410
#Deleted in new
chr30	30558934	30559156
#Deleted in new
chr30	30665391	30665517
#Deleted in new
chr30	30852560	30852685
#Deleted in new
chr30	31978284	31978474
#Deleted in new
chr30	31997422	31997594
#Deleted in new
chr30	32823311	32823605
#Deleted in new
chr30	32831932	32832057
#Deleted in new
chr30	35822718	35822915
#Deleted in new
chr30	37216930	37217098
#Deleted in new
chr30	38038646	38038771
#Partially deleted in new
chr30	38180165	38180381
#Deleted in new
chr30	38196211	38196346
#Deleted in new
chr30	38292633	38292838
#Deleted in new
chr30	38954031	38954189
#Deleted in new
chr30	39371986	39372261
#Deleted in new
chr31	2420664	2420789
#Deleted in new
chr31	5653063	5653244
#Deleted in new
chr31	5841374	5841501
#Deleted in new
chr31	6406268	6406482
#Deleted in new
chr31	8629538	8629663
#Deleted in new
chr31	10172300	10172449
#Deleted in new
chr31	10351820	10351951
#Deleted in new
chr31	11780665	11780811
#Deleted in new
chr31	13358813	13358938
#Deleted in new
chr31	14136245	14136370
#Deleted in new
chr31	14312118	14312249
#Deleted in new
chr31	15871506	15871879
#Deleted in new
chr31	18955435	18955632
#Deleted in new
chr31	19151036	19151216
#Partially deleted in new
chr31	20933643	20933768
#Deleted in new
chr31	23367563	23367688
#Duplicated in new
chr31	24094434	24094638
#Deleted in new
chr31	24319263	24319393
#Partially deleted in new
chr31	25341025	25341189
#Deleted in new
chr31	25807059	25807184
#Deleted in new
chr31	26469762	26469887
#Deleted in new
chr31	26639078	26639225
#Deleted in new
chr31	26703727	26703857
#Deleted in new
chr31	27396829	27396988
#Deleted in new
chr31	27491693	27491881
#Deleted in new
chr31	27497843	27497976
#Deleted in new
chr31	31112584	31112764
#Partially deleted in new
chr31	31318065	31318320
#Deleted in new
chr31	31360882	31361083
#Deleted in new
chr31	32538030	32538232
#Deleted in new
chr31	32909550	32909784
#Deleted in new
chr31	34420245	34420488
#Deleted in new
chr31	36207945	36208138
#Deleted in new
chr31	36703733	36703858
#Deleted in new
chr31	36754301	36754519
#Deleted in new
chr31	36929381	36929526
#Deleted in new
chr31	37111975	37112254
#Deleted in new
chr31	37179765	37179978
#Deleted in new
chr31	37189719	37189869
#Deleted in new
chr31	37834467	37834623
#Deleted in new
chr31	38118397	38118599
#Deleted in new
chr31	38471297	38471422
#Deleted in new
chr31	38905290	38905460
#Deleted in new
chr31	38909733	38909870
#Deleted in new
chr31	38994682	38994948
#Deleted in new
chr31	39213213	39213367
#Deleted in new
chr31	39806558	39806769
#Deleted in new
chr31	39806898	39807085
#Deleted in new
chr32	41322	41516
#Partially deleted in new
chr32	249580	249716
#Deleted in new
chr32	281660	281817
#Deleted in new
chr32	402435	402616
#Deleted in new
chr32	635581	635716
#Deleted in new
chr32	636232	636373
#Deleted in new
chr32	811172	811362
#Deleted in new
chr32	880126	880257
#Deleted in new
chr32	1005077	1005330
#Deleted in new
chr32	1006737	1006974
#Deleted in new
chr32	1037104	1037321
#Deleted in new
chr32	1440181	1440405
#Deleted in new
chr32	1578513	1578689
#Deleted in new
chr32	1809143	1809505
#Deleted in new
chr32	2999154	2999301
#Deleted in new
chr32	4336281	4336441
#Deleted in new
chr32	5119664	5119811
#Deleted in new
chr32	5666978	5667176
#Deleted in new
chr32	7139838	7139964
#Partially deleted in new
chr32	7339724	7339931
#Deleted in new
chr32	8955370	8955495
#Deleted in new
chr32	9467352	9467508
#Partially deleted in new
chr32	10508499	10508725
#Deleted in new
chr32	10951293	10951519
#Deleted in new
chr32	11535817	11535952
#Deleted in new
chr32	11593666	11593806
#Deleted in new
chr32	11660701	11660860
#Deleted in new
chr32	13108654	13108798
#Deleted in new
chr32	13430366	13430551
#Deleted in new
chr32	13799506	13799631
#Deleted in new
chr32	20147489	20147614
#Deleted in new
chr32	20492959	20493084
#Deleted in new
chr32	21310969	21311260
#Deleted in new
chr32	22829702	22829827
#Deleted in new
chr32	23091365	23091495
#Deleted in new
chr32	23243779	23243939
#Deleted in new
chr32	23681075	23681306
#Deleted in new
chr32	24007016	24007198
#Deleted in new
chr32	24287051	24287208
#Deleted in new
chr32	24445081	24445531
#Deleted in new
chr32	25258754	25258993
#Deleted in new
chr32	26650210	26650346
#Deleted in new
chr32	26696939	26697168
#Deleted in new
chr32	26698798	26698993
#Deleted in new
chr32	27723892	27724058
#Partially deleted in new
chr32	28451284	28451526
#Deleted in new
chr32	29665277	29665412
#Deleted in new
chr32	29806946	29807084
#Deleted in new
chr32	29892392	29892565
#Deleted in new
chr32	29994950	29995075
#Deleted in new
chr32	30135266	30135474
#Deleted in new
chr32	30399185	30399310
#Partially deleted in new
chr32	30478637	30478802
#Deleted in new
chr32	30664930	30665277
#Deleted in new
chr32	31989307	31989487
#Deleted in new
chr32	32054325	32054545
#Deleted in new
chr32	32177097	32177241
#Partially deleted in new
chr32	33588674	33588829
#Deleted in new
chr32	33626423	33626558
#Deleted in new
chr32	36196267	36196461
#Deleted in new
chr32	37496409	37496589
#Deleted in new
chr32	37796406	37796531
#Partially deleted in new
chr32	38647102	38647243
#Deleted in new
chr33	708531	708677
#Deleted in new
chr33	3653680	3653812
#Deleted in new
chr33	3848673	3848836
#Deleted in new
chr33	4040867	4040992
#Partially deleted in new
chr33	4505516	4505641
#Deleted in new
chr33	4930939	4931171
#Deleted in new
chr33	5785867	5786010
#Deleted in new
chr33	6972786	6972918
#Deleted in new
chr33	7610565	7610861
#Deleted in new
chr33	10838461	10838675
#Deleted in new
chr33	15050151	15050481
#Deleted in new
chr33	15329035	15329231
#Deleted in new
chr33	16926364	16926491
#Deleted in new
chr33	17828244	17828402
#Deleted in new
chr33	22128912	22129037
#Deleted in new
chr33	22505186	22505427
#Deleted in new
chr33	22942801	22943035
#Deleted in new
chr33	23427320	23427507
#Partially deleted in new
chr33	23527824	23527973
#Deleted in new
chr33	23814094	23814327
#Deleted in new
chr33	25101111	25101236
#Deleted in new
chr33	25744085	25744313
#Deleted in new
chr33	26343088	26343256
#Deleted in new
chr33	26619565	26619690
#Deleted in new
chr33	27600412	27600626
#Deleted in new
chr33	27780276	27780476
#Deleted in new
chr33	28497548	28497673
#Deleted in new
chr33	28625610	28625779
#Deleted in new
chr33	28928465	28928602
#Deleted in new
chr33	28939297	28939428
#Deleted in new
chr33	29251276	29251418
#Deleted in new
chr33	29383866	29383995
#Deleted in new
chr33	29575604	29575729
#Deleted in new
chr33	29793814	29794028
#Deleted in new
chr33	30032689	30032819
#Deleted in new
chr33	30699395	30699520
#Deleted in new
chr33	30755094	30755260
#Deleted in new
chr33	31199174	31199299
#Deleted in new
chr33	31371644	31371911
#Deleted in new
chr34	2386904	2387056
#Deleted in new
chr34	3661185	3661310
#Partially deleted in new
chr34	3943213	3943352
#Deleted in new
chr34	4004841	4005084
#Deleted in new
chr34	4008551	4008757
#Deleted in new
chr34	4008890	4009106
#Deleted in new
chr34	4050203	4050337
#Deleted in new
chr34	4050752	4050906
#Deleted in new
chr34	5703019	5703164
#Deleted in new
chr34	7009010	7009136
#Deleted in new
chr34	7088776	7088908
#Deleted in new
chr34	7089107	7089255
#Deleted in new
chr34	7174852	7175028
#Deleted in new
chr34	7405352	7405577
#Deleted in new
chr34	10979331	10979490
#Deleted in new
chr34	11031739	11031918
#Partially deleted in new
chr34	11391909	11392179
#Deleted in new
chr34	11484315	11484440
#Deleted in new
chr34	11522287	11522573
#Partially deleted in new
chr34	11658590	11658907
#Partially deleted in new
chr34	12106832	12107139
#Deleted in new
chr34	12341967	12342193
#Deleted in new
chr34	12482396	12482521
#Deleted in new
chr34	12581177	12581374
#Deleted in new
chr34	13379052	13379177
#Deleted in new
chr34	13426180	13426348
#Partially deleted in new
chr34	13860965	13861106
#Deleted in new
chr34	15936949	15937086
#Deleted in new
chr34	16333020	16333155
#Deleted in new
chr34	16388204	16388364
#Duplicated in new
chr34	16415533	16415756
#Deleted in new
chr34	16850211	16850394
#Deleted in new
chr34	17311023	17311242
#Deleted in new
chr34	18066643	18066768
#Deleted in new
chr34	18279047	18279359
#Deleted in new
chr34	18556615	18556779
#Deleted in new
chr34	20649345	20649470
#Deleted in new
chr34	21459498	21459702
#Deleted in new
chr34	22059183	22059347
#Deleted in new
chr34	22478136	22478410
#Deleted in new
chr34	23278156	23278364
#Partially deleted in new
chr34	23598276	23598439
#Deleted in new
chr34	23869926	23870052
#Deleted in new
chr34	24847593	24847718
#Deleted in new
chr34	26145498	26145702
#Deleted in new
chr34	26540689	26540814
#Partially deleted in new
chr34	26907814	26907975
#Deleted in new
chr34	27006355	27006558
#Deleted in new
chr34	27204240	27204396
#Deleted in new
chr34	28079193	28079342
#Deleted in new
chr34	32633991	32634202
#Deleted in new
chr34	32740519	32740644
#Deleted in new
chr34	33213098	33213329
#Deleted in new
chr34	34640059	34640293
#Deleted in new
chr34	35628663	35628845
#Deleted in new
chr34	36008732	36008955
#Deleted in new
chr34	36280351	36280485
#Deleted in new
chr34	37842054	37842312
#Deleted in new
chr34	38792194	38792319
#Deleted in new
chr34	41570664	41570789
#Deleted in new
chr35	372361	372508
#Partially deleted in new
chr35	372584	372800
#Deleted in new
chr35	430098	430398
#Deleted in new
chr35	430586	431043
#Deleted in new
chr35	546311	546522
#Deleted in new
chr35	568346	568572
#Deleted in new
chr35	3224427	3224613
#Partially deleted in new
chr35	3241714	3241856
#Deleted in new
chr35	3295353	3295478
#Deleted in new
chr35	3324162	3324425
#Deleted in new
chr35	3460487	3460648
#Deleted in new
chr35	3485754	3485965
#Deleted in new
chr35	3531542	3531815
#Duplicated in new
chr35	5149677	5149921
#Partially deleted in new
chr35	5582894	5583027
#Deleted in new
chr35	6143470	6143694
#Deleted in new
chr35	6356669	6356856
#Deleted in new
chr35	6907555	6907695
#Deleted in new
chr35	7606823	7607157
#Deleted in new
chr35	7772393	7772540
#Deleted in new
chr35	10631227	10631370
#Deleted in new
chr35	12214521	12214756
#Deleted in new
chr35	12936650	12936785
#Deleted in new
chr35	14083556	14083681
#Deleted in new
chr35	14383956	14384081
#Deleted in new
chr35	14472770	14472906
#Deleted in new
chr35	15482622	15482867
#Deleted in new
chr35	16046507	16046657
#Deleted in new
chr35	16097760	16097968
#Deleted in new
chr35	16205885	16206010
#Deleted in new
chr35	16503064	16503230
#Partially deleted in new
chr35	16507139	16507348
#Deleted in new
chr35	16516913	16517137
#Deleted in new
chr35	16583411	16583557
#Deleted in new
chr35	16925001	16925299
#Partially deleted in new
chr35	17091152	17091348
#Deleted in new
chr35	22276611	22276771
#Deleted in new
chr35	22710546	22710674
#Deleted in new
chr35	23240889	23241014
#Deleted in new
chr35	23800716	23801114
#Deleted in new
chr35	23981419	23981560
#Deleted in new
chr35	24571835	24572021
#Deleted in new
chr35	24609974	24610110
#Deleted in new
chr35	24943405	24943676
#Deleted in new
chr35	24995044	24995201
#Deleted in new
chr35	25067418	25067656
#Deleted in new
chr35	25681937	25682062
#Partially deleted in new
chr35	25718352	25718514
#Deleted in new
chr36	420426	420583
#Deleted in new
chr36	5822532	5822657
#Deleted in new
chr36	6408694	6408837
#Deleted in new
chr36	13174582	13174749
#Deleted in new
chr36	13278142	13278393
#Partially deleted in new
chr36	13287845	13288000
#Deleted in new
chr36	13479215	13479431
#Deleted in new
chr36	14508461	14508603
#Deleted in new
chr36	14510828	14510953
#Deleted in new
chr36	14566452	14566577
#Deleted in new
chr36	14738672	14738948
#Partially deleted in new
chr36	15022935	15023068
#Deleted in new
chr36	16170097	16170359
#Deleted in new
chr36	16370464	16370589
#Deleted in new
chr36	16885182	16885422
#Partially deleted in new
chr36	18456106	18456233
#Deleted in new
chr36	18565509	18565794
#Deleted in new
chr36	19061291	19061507
#Partially deleted in new
chr36	19073630	19073839
#Deleted in new
chr36	19244324	19244483
#Deleted in new
chr36	19268081	19268249
#Deleted in new
chr36	21004800	21004925
#Partially deleted in new
chr36	21019774	21019937
#Deleted in new
chr36	21220233	21220358
#Deleted in new
chr36	21495216	21495506
#Deleted in new
chr36	25653737	25653937
#Deleted in new
chr36	28797990	28798139
#Deleted in new
chr37	247061	247186
#Deleted in new
chr37	486553	486713
#Deleted in new
chr37	966817	966977
#Partially deleted in new
chr37	1718603	1718792
#Deleted in new
chr37	4968518	4968706
#Deleted in new
chr37	5522548	5522673
#Deleted in new
chr37	6027528	6027659
#Deleted in new
chr37	6356861	6356997
#Partially deleted in new
chr37	7000003	7000150
#Deleted in new
chr37	7069173	7069368
#Deleted in new
chr37	7193692	7193847
#Deleted in new
chr37	7293234	7293431
#Deleted in new
chr37	7554580	7554705
#Deleted in new
chr37	8265488	8265613
#Deleted in new
chr37	9891108	9891289
#Deleted in new
chr37	9922896	9923178
#Deleted in new
chr37	9924539	9924744
#Deleted in new
chr37	9924934	9925070
#Deleted in new
chr37	10032117	10032242
#Deleted in new
chr37	10451204	10451394
#Deleted in new
chr37	11330216	11330392
#Deleted in new
chr37	11408724	11408903
#Deleted in new
chr37	11441628	11441779
#Deleted in new
chr37	11875076	11875261
#Deleted in new
chr37	12101754	12102034
#Deleted in new
chr37	12211541	12211724
#Deleted in new
chr37	12293824	12293987
#Deleted in new
chr37	12555011	12555243
#Deleted in new
chr37	15379808	15379953
#Deleted in new
chr37	16691865	16692036
#Deleted in new
chr37	17320680	17320902
#Deleted in new
chr37	21277590	21277808
#Deleted in new
chr37	21648800	21649033
#Deleted in new
chr37	21909965	21910123
#Deleted in new
chr37	22390279	22390471
#Deleted in new
chr37	25377481	25377606
#Deleted in new
chr37	28794261	28794462
#Deleted in new
chr37	30050606	30050731
#Deleted in new
chr37	30128864	30128989
#Deleted in new
chr37	30869373	30869572
#Deleted in new
chr38	953235	953360
#Deleted in new
chr38	953448	953615
#Deleted in new
chr38	1636093	1636218
#Deleted in new
chr38	2334631	2334901
#Deleted in new
chr38	3188743	3188910
#Deleted in new
chr38	5958628	5958829
#Deleted in new
chr38	6300305	6300449
#Deleted in new
chr38	6300734	6300942
#Deleted in new
chr38	7922869	7923115
#Deleted in new
chr38	8134690	8134815
#Deleted in new
chr38	14724685	14724810
#Deleted in new
chr38	15349326	15349520
#Deleted in new
chr38	15418598	15418731
#Deleted in new
chr38	15486029	15486154
#Deleted in new
chr38	17021142	17021337
#Partially deleted in new
chr38	17709118	17709264
#Deleted in new
chr38	17943676	17943827
#Deleted in new
chr38	19588039	19588239
#Deleted in new
chr38	20282029	20282597
#Deleted in new
chr38	20926075	20926347
#Deleted in new
chr38	21611081	21611299
#Deleted in new
chr38	21850624	21850822
#Deleted in new
chr38	22400403	22400592
#Deleted in new
chr38	23415675	23415882
#Deleted in new
chr38	23823221	23823408
#Deleted in new
chr4	10864	10990
#Deleted in new
chr4	1744378	1744504
#Deleted in new
chr4	3937066	3937191
#Deleted in new
chr4	4158418	4158552
#Deleted in new
chr4	4563124	4563346
#Deleted in new
chr4	4641362	4641554
#Deleted in new
chr4	6034613	6034808
#Deleted in new
chr4	6232806	6232996
#Partially deleted in new
chr4	6289301	6289573
#Deleted in new
chr4	6796749	6796918
#Deleted in new
chr4	8695262	8695512
#Deleted in new
chr4	8764062	8764344
#Deleted in new
chr4	9007577	9007731
#Deleted in new
chr4	9034396	9034523
#Deleted in new
chr4	9313251	9313428
#Partially deleted in new
chr4	9362639	9362805
#Deleted in new
chr4	9577133	9577259
#Deleted in new
chr4	10475795	10476031
#Deleted in new
chr4	10574656	10574906
#Deleted in new
chr4	10575004	10575166
#Deleted in new
chr4	11514474	11514814
#Deleted in new
chr4	11811176	11811425
#Deleted in new
chr4	12036752	12037029
#Deleted in new
chr4	15191667	15191792
#Deleted in new
chr4	15262737	15262869
#Partially deleted in new
chr4	19139111	19139236
#Deleted in new
chr4	19143811	19144059
#Deleted in new
chr4	19160215	19160559
#Deleted in new
chr4	19171164	19171289
#Deleted in new
chr4	19283841	19284076
#Deleted in new
chr4	19540189	19540336
#Split in new
chr4	19781025	19781219
#Deleted in new
chr4	19916115	19916364
#Deleted in new
chr4	20303085	20303285
#Deleted in new
chr4	20671756	20671881
#Deleted in new
chr4	21321322	21321606
#Deleted in new
chr4	21633895	21634061
#Deleted in new
chr4	21754561	21754728
#Deleted in new
chr4	22636076	22636207
#Deleted in new
chr4	22636321	22636510
#Partially deleted in new
chr4	22956191	22956325
#Deleted in new
chr4	23067412	23067604
#Deleted in new
chr4	23465375	23465590
#Deleted in new
chr4	23465827	23466078
#Deleted in new
chr4	23566611	23566767
#Deleted in new
chr4	24023680	24023832
#Deleted in new
chr4	24542718	24542843
#Partially deleted in new
chr4	24572594	24572788
#Partially deleted in new
chr4	24742729	24742874
#Deleted in new
chr4	24819245	24819370
#Deleted in new
chr4	25235529	25235703
#Deleted in new
chr4	26015970	26016289
#Deleted in new
chr4	27642643	27642951
#Deleted in new
chr4	29089270	29089489
#Deleted in new
chr4	29368608	29368861
#Deleted in new
chr4	29429040	29429206
#Deleted in new
chr4	29522602	29522800
#Deleted in new
chr4	29803064	29803236
#Deleted in new
chr4	32226013	32226195
#Deleted in new
chr4	34217460	34217585
#Partially deleted in new
chr4	34281460	34281723
#Deleted in new
chr4	34460066	34460239
#Deleted in new
chr4	34703911	34704122
#Deleted in new
chr4	34704183	34704326
#Deleted in new
chr4	34708163	34708288
#Deleted in new
chr4	34728469	34728594
#Deleted in new
chr4	34729852	34730104
#Deleted in new
chr4	35139624	35139908
#Deleted in new
chr4	35203868	35204091
#Deleted in new
chr4	35204217	35204368
#Deleted in new
chr4	35318586	35318733
#Deleted in new
chr4	35601831	35602014
#Deleted in new
chr4	35785145	35785484
#Deleted in new
chr4	36039494	36039777
#Deleted in new
chr4	36176619	36176799
#Partially deleted in new
chr4	36837559	36837684
#Deleted in new
chr4	36963719	36963853
#Deleted in new
chr4	37099105	37099305
#Deleted in new
chr4	37356783	37356908
#Deleted in new
chr4	37389539	37389800
#Partially deleted in new
chr4	37793945	37794071
#Deleted in new
chr4	38849942	38850067
#Deleted in new
chr4	39406084	39406209
#Deleted in new
chr4	40225827	40226035
#Deleted in new
chr4	43225382	43225578
#Deleted in new
chr4	45669712	45669920
#Deleted in new
chr4	47061846	47062012
#Deleted in new
chr4	49932874	49933014
#Deleted in new
chr4	53000104	53000364
#Deleted in new
chr4	54923446	54923572
#Partially deleted in new
chr4	55131150	55131314
#Deleted in new
chr4	58350772	58350897
#Deleted in new
chr4	58590356	58590594
#Deleted in new
chr4	60342099	60342229
#Deleted in new
chr4	60671590	60671738
#Deleted in new
chr4	62353366	62353491
#Deleted in new
chr4	64380658	64380865
#Deleted in new
chr4	66578504	66578687
#Deleted in new
chr4	66777900	66778111
#Deleted in new
chr4	66908850	66909047
#Partially deleted in new
chr4	67256572	67256719
#Deleted in new
chr4	67647356	67647481
#Partially deleted in new
chr4	67861725	67861857
#Partially deleted in new
chr4	71692923	71693111
#Deleted in new
chr4	72431947	72432110
#Deleted in new
chr4	72732800	72732970
#Deleted in new
chr4	74209302	74209441
#Deleted in new
chr4	74464501	74464652
#Deleted in new
chr4	74749627	74749868
#Deleted in new
chr4	74921862	74922122
#Deleted in new
chr4	75032894	75033037
#Deleted in new
chr4	75136704	75136949
#Partially deleted in new
chr4	75231045	75231210
#Deleted in new
chr4	75299770	75299905
#Deleted in new
chr4	76554734	76554882
#Deleted in new
chr4	80483096	80483243
#Deleted in new
chr4	86192428	86192553
#Deleted in new
chr4	86438166	86438299
#Deleted in new
chr4	87535808	87535933
#Partially deleted in new
chr5	4994991	4995205
#Deleted in new
chr5	5133417	5133545
#Deleted in new
chr5	6588789	6588914
#Deleted in new
chr5	8791076	8791230
#Deleted in new
chr5	8985927	8986148
#Deleted in new
chr5	8995371	8995583
#Deleted in new
chr5	10530787	10530994
#Deleted in new
chr5	11297621	11297810
#Deleted in new
chr5	11309898	11310024
#Deleted in new
chr5	11310161	11310316
#Deleted in new
chr5	11452287	11452471
#Deleted in new
chr5	11805349	11805474
#Deleted in new
chr5	11833962	11834225
#Partially deleted in new
chr5	12811421	12811579
#Deleted in new
chr5	13815158	13815390
#Deleted in new
chr5	14728932	14729057
#Partially deleted in new
chr5	14788261	14788461
#Deleted in new
chr5	14986198	14986373
#Deleted in new
chr5	15189878	15190056
#Deleted in new
chr5	15420619	15420823
#Deleted in new
chr5	16489375	16489552
#Partially deleted in new
chr5	18992999	18993132
#Deleted in new
chr5	19577282	19577495
#Partially deleted in new
chr5	20911519	20911718
#Deleted in new
chr5	21018058	21018213
#Deleted in new
chr5	21106543	21106677
#Deleted in new
chr5	22466691	22466920
#Deleted in new
chr5	23838415	23838544
#Deleted in new
chr5	24489979	24490136
#Deleted in new
chr5	26979299	26979444
#Partially deleted in new
chr5	29310519	29310721
#Deleted in new
chr5	29460388	29460541
#Deleted in new
chr5	30408555	30408745
#Deleted in new
chr5	30456786	30456953
#Deleted in new
chr5	30462382	30462591
#Deleted in new
chr5	30595764	30595937
#Deleted in new
chr5	30636063	30636188
#Partially deleted in new
chr5	30654792	30654987
#Deleted in new
chr5	31499805	31500027
#Deleted in new
chr5	31525693	31525898
#Deleted in new
chr5	31598764	31598919
#Deleted in new
chr5	31922182	31922307
#Deleted in new
chr5	31922520	31922666
#Deleted in new
chr5	31965076	31965239
#Deleted in new
chr5	32039126	32039265
#Deleted in new
chr5	32254941	32255138
#Deleted in new
chr5	32267015	32267140
#Deleted in new
chr5	32296145	32296290
#Deleted in new
chr5	32333662	32333929
#Deleted in new
chr5	32409336	32409468
#Deleted in new
chr5	32409610	32409863
#Deleted in new
chr5	32451390	32451515
#Deleted in new
chr5	32457038	32457163
#Deleted in new
chr5	32533834	32534048
#Deleted in new
chr5	32820405	32820561
#Deleted in new
chr5	36895622	36895747
#Deleted in new
chr5	36984809	36985049
#Deleted in new
chr5	38077705	38077874
#Deleted in new
chr5	39373073	39373226
#Deleted in new
chr5	39373448	39373687
#Deleted in new
chr5	39422508	39422795
#Deleted in new
chr5	39750962	39751156
#Deleted in new
chr5	40417458	40417594
#Deleted in new
chr5	40475979	40476326
#Deleted in new
chr5	40557041	40557266
#Deleted in new
chr5	40701149	40701362
#Deleted in new
chr5	40769709	40769862
#Deleted in new
chr5	40997742	40997933
#Partially deleted in new
chr5	41136301	41136479
#Deleted in new
chr5	41175894	41176019
#Deleted in new
chr5	41181415	41181848
#Deleted in new
chr5	41504033	41504213
#Deleted in new
chr5	42421298	42421551
#Deleted in new
chr5	42607165	42607381
#Deleted in new
chr5	42608180	42608319
#Deleted in new
chr5	42701852	42701984
#Deleted in new
chr5	42702085	42702215
#Partially deleted in new
chr5	42880761	42880886
#Partially deleted in new
chr5	42918724	42918877
#Deleted in new
chr5	43096443	43096575
#Deleted in new
chr5	43114447	43114717
#Deleted in new
chr5	43548933	43549144
#Deleted in new
chr5	44281592	44281766
#Deleted in new
chr5	44669324	44669468
#Deleted in new
chr5	45077636	45077761
#Partially deleted in new
chr5	45189019	45189219
#Deleted in new
chr5	45277920	45278045
#Deleted in new
chr5	46053653	46053830
#Deleted in new
chr5	46835655	46835780
#Partially deleted in new
chr5	47365266	47365431
#Deleted in new
chr5	47884792	47884990
#Deleted in new
chr5	47904363	47904536
#Partially deleted in new
chr5	48893931	48894077
#Deleted in new
chr5	51088207	51088332
#Partially deleted in new
chr5	52511337	52511537
#Partially deleted in new
chr5	53956131	53956463
#Deleted in new
chr5	54284413	54284685
#Deleted in new
chr5	55078639	55078788
#Deleted in new
chr5	55124368	55124580
#Partially deleted in new
chr5	55276323	55276455
#Partially deleted in new
chr5	55751713	55751940
#Deleted in new
chr5	55769359	55769531
#Deleted in new
chr5	55966493	55966618
#Partially deleted in new
chr5	55971642	55971933
#Deleted in new
chr5	56020800	56020995
#Deleted in new
chr5	56123427	56123552
#Deleted in new
chr5	56133711	56134011
#Deleted in new
chr5	56211819	56211944
#Deleted in new
chr5	56229182	56229318
#Deleted in new
chr5	56248618	56249114
#Deleted in new
chr5	56419571	56419789
#Deleted in new
chr5	56671598	56672158
#Deleted in new
chr5	56731121	56731257
#Partially deleted in new
chr5	56752034	56752323
#Deleted in new
chr5	58151524	58151693
#Deleted in new
chr5	60152002	60152127
#Partially deleted in new
chr5	60221732	60221984
#Deleted in new
chr5	60237694	60237914
#Deleted in new
chr5	60237994	60238125
#Deleted in new
chr5	61749929	61750147
#Deleted in new
chr5	62160974	62161159
#Deleted in new
chr5	62386768	62386926
#Deleted in new
chr5	62964679	62964957
#Deleted in new
chr5	62979815	62979979
#Deleted in new
chr5	63165614	63165757
#Deleted in new
chr5	63203256	63203416
#Deleted in new
chr5	63320329	63320573
#Deleted in new
chr5	63542591	63542952
#Deleted in new
chr5	63555491	63555691
#Deleted in new
chr5	63582053	63582252
#Deleted in new
chr5	63725991	63726162
#Deleted in new
chr5	63736143	63736301
#Deleted in new
chr5	63908140	63908382
#Deleted in new
chr5	63976330	63976670
#Deleted in new
chr5	64007142	64007285
#Deleted in new
chr5	64059185	64059321
#Deleted in new
chr5	64198658	64198865
#Deleted in new
chr5	64249568	64249958
#Deleted in new
chr5	64315921	64316065
#Deleted in new
chr5	64469781	64469937
#Deleted in new
chr5	64559452	64559577
#Deleted in new
chr5	64579174	64579457
#Deleted in new
chr5	64809198	64809485
#Deleted in new
chr5	65163795	65164058
#Deleted in new
chr5	65212464	65212605
#Deleted in new
chr5	65281724	65282074
#Deleted in new
chr5	65378930	65379170
#Deleted in new
chr5	65385465	65385598
#Deleted in new
chr5	65394375	65394581
#Partially deleted in new
chr5	65659152	65659320
#Deleted in new
chr5	65768405	65768973
#Deleted in new
chr5	65798366	65798543
#Deleted in new
chr5	67441299	67441430
#Deleted in new
chr5	68065841	68066078
#Deleted in new
chr5	68462573	68462738
#Duplicated in new
chr5	68771921	68772449
#Deleted in new
chr5	70498054	70498222
#Deleted in new
chr5	70660574	70660782
#Deleted in new
chr5	70663211	70663368
#Deleted in new
chr5	71535076	71535251
#Deleted in new
chr5	72200171	72200407
#Deleted in new
chr5	73931578	73931733
#Deleted in new
chr5	75192190	75192379
#Deleted in new
chr5	75361294	75361503
#Partially deleted in new
chr5	75370553	75370751
#Deleted in new
chr5	75533993	75534145
#Partially deleted in new
chr5	75586390	75586542
#Deleted in new
chr5	75587436	75587561
#Deleted in new
chr5	75941175	75941336
#Deleted in new
chr5	75977323	75977448
#Deleted in new
chr5	76036108	76036334
#Deleted in new
chr5	76210228	76210367
#Deleted in new
chr5	77293826	77294086
#Deleted in new
chr5	77350929	77351216
#Deleted in new
chr5	77486636	77486809
#Deleted in new
chr5	77542959	77543087
#Deleted in new
chr5	78231978	78232128
#Deleted in new
chr5	78310066	78310191
#Deleted in new
chr5	78437283	78437464
#Deleted in new
chr5	79980777	79980902
#Deleted in new
chr5	79992813	79992938
#Deleted in new
chr5	80341660	80341841
#Deleted in new
chr5	80364835	80364960
#Deleted in new
chr5	80494456	80494654
#Deleted in new
chr5	80737921	80738078
#Deleted in new
chr5	80861147	80861291
#Deleted in new
chr5	80953720	80953915
#Partially deleted in new
chr5	81389566	81389734
#Deleted in new
chr5	81908469	81908715
#Deleted in new
chr5	82050002	82050127
#Deleted in new
chr5	82246763	82247096
#Partially deleted in new
chr5	82321431	82321694
#Partially deleted in new
chr5	82342493	82342629
#Deleted in new
chr5	82387136	82387273
#Deleted in new
chr5	82799929	82800137
#Deleted in new
chr6	333150	333382
#Duplicated in new
chr6	608979	609113
#Deleted in new
chr6	678905	679048
#Partially deleted in new
chr6	757909	758178
#Deleted in new
chr6	762522	762730
#Deleted in new
chr6	779959	780244
#Partially deleted in new
chr6	1107343	1107498
#Deleted in new
chr6	1372941	1373143
#Deleted in new
chr6	3493353	3493480
#Deleted in new
chr6	4107094	4107219
#Deleted in new
chr6	5525967	5526180
#Deleted in new
chr6	5578365	5578602
#Deleted in new
chr6	5831550	5831675
#Deleted in new
chr6	6091798	6091956
#Deleted in new
chr6	6475810	6475985
#Deleted in new
chr6	6518313	6518455
#Deleted in new
chr6	6996825	6996982
#Deleted in new
chr6	7125420	7125619
#Deleted in new
chr6	7214831	7215105
#Deleted in new
chr6	7233777	7234000
#Deleted in new
chr6	7581869	7581994
#Deleted in new
chr6	7582059	7582281
#Deleted in new
chr6	7862299	7862572
#Deleted in new
chr6	8288287	8288412
#Deleted in new
chr6	8344064	8344202
#Deleted in new
chr6	8495470	8495631
#Partially deleted in new
chr6	8554145	8554279
#Deleted in new
chr6	8596220	8596454
#Deleted in new
chr6	8596505	8596670
#Deleted in new
chr6	8628009	8628163
#Deleted in new
chr6	9299006	9299148
#Deleted in new
chr6	9411652	9411815
#Deleted in new
chr6	9471032	9471333
#Deleted in new
chr6	9505651	9506070
#Deleted in new
chr6	9650776	9650980
#Deleted in new
chr6	9718802	9718960
#Deleted in new
chr6	9903082	9903295
#Deleted in new
chr6	10108870	10109131
#Deleted in new
chr6	10330845	10331078
#Partially deleted in new
chr6	10473120	10473306
#Deleted in new
chr6	10657684	10657838
#Deleted in new
chr6	10684861	10684986
#Deleted in new
chr6	10886062	10886216
#Deleted in new
chr6	11419301	11419643
#Deleted in new
chr6	11795378	11795503
#Deleted in new
chr6	11915417	11915549
#Deleted in new
chr6	11948455	11948630
#Deleted in new
chr6	12403605	12403858
#Deleted in new
chr6	12427679	12427827
#Partially deleted in new
chr6	12561381	12561669
#Deleted in new
chr6	12702241	12702384
#Deleted in new
chr6	12775055	12775180
#Deleted in new
chr6	12775231	12775417
#Deleted in new
chr6	13123325	13123590
#Partially deleted in new
chr6	14487233	14487358
#Deleted in new
chr6	14548147	14548293
#Deleted in new
chr6	14627370	14627601
#Deleted in new
chr6	14627766	14627891
#Deleted in new
chr6	14732649	14732865
#Deleted in new
chr6	14814828	14815121
#Deleted in new
chr6	14988777	14988944
#Deleted in new
chr6	15078440	15078565
#Deleted in new
chr6	15209242	15209619
#Deleted in new
chr6	15556692	15556850
#Partially deleted in new
chr6	15737787	15738091
#Deleted in new
chr6	15868435	15868609
#Deleted in new
chr6	15918574	15918722
#Deleted in new
chr6	16147975	16148105
#Deleted in new
chr6	16499232	16499376
#Deleted in new
chr6	16628095	16628260
#Deleted in new
chr6	16650527	16650755
#Deleted in new
chr6	16671546	16671728
#Deleted in new
chr6	16737414	16737590
#Deleted in new
chr6	16910206	16910478
#Deleted in new
chr6	16910571	16910782
#Deleted in new
chr6	17174314	17174439
#Deleted in new
chr6	17174564	17174725
#Deleted in new
chr6	17315004	17315129
#Deleted in new
chr6	17361588	17361833
#Deleted in new
chr6	17533069	17533319
#Deleted in new
chr6	17582891	17583115
#Deleted in new
chr6	17583920	17584045
#Deleted in new
chr6	17600054	17600291
#Deleted in new
chr6	17603635	17603763
#Deleted in new
chr6	17603835	17604062
#Partially deleted in new
chr6	17619601	17619759
#Deleted in new
chr6	17674294	17674426
#Deleted in new
chr6	17751563	17751789
#Deleted in new
chr6	17754206	17754390
#Deleted in new
chr6	17781630	17781838
#Deleted in new
chr6	17821035	17821230
#Deleted in new
chr6	17884651	17884856
#Deleted in new
chr6	17970206	17970343
#Deleted in new
chr6	18210664	18210806
#Deleted in new
chr6	18270549	18270804
#Deleted in new
chr6	18273391	18273522
#Deleted in new
chr6	18364336	18364586
#Deleted in new
chr6	18370187	18370312
#Deleted in new
chr6	18430644	18430803
#Deleted in new
chr6	18679042	18679266
#Deleted in new
chr6	19084097	19084269
#Partially deleted in new
chr6	19516046	19516209
#Deleted in new
chr6	19920323	19920448
#Deleted in new
chr6	19944274	19944399
#Deleted in new
chr6	19946581	19946885
#Deleted in new
chr6	19946983	19947108
#Deleted in new
chr6	20248787	20248912
#Deleted in new
chr6	21239999	21240343
#Deleted in new
chr6	21421453	21421715
#Deleted in new
chr6	21421766	21421894
#Deleted in new
chr6	21445106	21445231
#Deleted in new
chr6	22044043	22044175
#Deleted in new
chr6	22146440	22146661
#Deleted in new
chr6	23236939	23237148
#Deleted in new
chr6	23832794	23833058
#Deleted in new
chr6	23940254	23940487
#Deleted in new
chr6	23980020	23980160
#Deleted in new
chr6	23985744	23985926
#Deleted in new
chr6	24002588	24002735
#Deleted in new
chr6	24040491	24040720
#Deleted in new
chr6	24176212	24176463
#Deleted in new
chr6	25389884	25390009
#Deleted in new
chr6	25603695	25603890
#Deleted in new
chr6	25650327	25650526
#Deleted in new
chr6	26154960	26155085
#Deleted in new
chr6	28117411	28117607
#Deleted in new
chr6	28251150	28251357
#Deleted in new
chr6	28400060	28400185
#Deleted in new
chr6	28408862	28409055
#Deleted in new
chr6	28530639	28530769
#Deleted in new
chr6	28533453	28533653
#Deleted in new
chr6	28533712	28533847
#Deleted in new
chr6	29049977	29050125
#Deleted in new
chr6	29331718	29331921
#Deleted in new
chr6	30896299	30896460
#Deleted in new
chr6	31179528	31179896
#Partially deleted in new
chr6	31733691	31734030
#Deleted in new
chr6	32053849	32053982
#Deleted in new
chr6	33183199	33183405
#Deleted in new
chr6	33328266	33328454
#Deleted in new
chr6	33328552	33328724
#Deleted in new
chr6	36407444	36407635
#Deleted in new
chr6	36482437	36482562
#Partially deleted in new
chr6	36549741	36549877
#Deleted in new
chr6	36673952	36674192
#Deleted in new
chr6	36692898	36693062
#Deleted in new
chr6	36752740	36752903
#Deleted in new
chr6	36834501	36834626
#Deleted in new
chr6	36885785	36885910
#Deleted in new
chr6	36949074	36949360
#Deleted in new
chr6	37287274	37287496
#Deleted in new
chr6	37558602	37558820
#Deleted in new
chr6	37746294	37746475
#Deleted in new
chr6	37978804	37978961
#Deleted in new
chr6	38079203	38079434
#Deleted in new
chr6	38079559	38079684
#Deleted in new
chr6	38100111	38100481
#Deleted in new
chr6	38110118	38110256
#Deleted in new
chr6	38242805	38243066
#Deleted in new
chr6	38266309	38266564
#Deleted in new
chr6	38387309	38387521
#Deleted in new
chr6	38501222	38501467
#Deleted in new
chr6	38699956	38700240
#Deleted in new
chr6	38753666	38753796
#Deleted in new
chr6	39464060	39464348
#Deleted in new
chr6	39846365	39846551
#Deleted in new
chr6	39951990	39952149
#Deleted in new
chr6	40103760	40103928
#Duplicated in new
chr6	40112641	40112858
#Deleted in new
chr6	40440821	40441073
#Deleted in new
chr6	40441539	40441718
#Deleted in new
chr6	40602560	40602721
#Deleted in new
chr6	40704976	40705126
#Deleted in new
chr6	40944947	40945146
#Deleted in new
chr6	41175738	41176009
#Deleted in new
chr6	41176088	41176305
#Deleted in new
chr6	41589826	41590005
#Deleted in new
chr6	41605534	41605659
#Deleted in new
chr6	41606424	41606549
#Deleted in new
chr6	41659350	41659475
#Deleted in new
chr6	41663488	41663693
#Deleted in new
chr6	42687357	42687528
#Deleted in new
chr6	42776697	42776831
#Deleted in new
chr6	42990838	42990970
#Deleted in new
chr6	42992220	42992373
#Deleted in new
chr6	48276079	48276204
#Deleted in new
chr6	49369903	49370072
#Deleted in new
chr6	49752714	49752839
#Deleted in new
chr6	49896465	49896590
#Partially deleted in new
chr6	50088346	50088540
#Deleted in new
chr6	53378961	53379095
#Partially deleted in new
chr6	54716880	54717009
#Partially deleted in new
chr6	54993596	54993779
#Partially deleted in new
chr6	55505039	55505164
#Deleted in new
chr6	55661485	55661613
#Deleted in new
chr6	55784566	55784712
#Partially deleted in new
chr6	56192456	56192614
#Partially deleted in new
chr6	56328256	56328448
#Deleted in new
chr6	57403594	57403730
#Deleted in new
chr6	58324909	58325109
#Deleted in new
chr6	59143275	59143413
#Partially deleted in new
chr6	59347761	59347964
#Partially deleted in new
chr6	61155958	61156182
#Deleted in new
chr6	61673366	61673547
#Deleted in new
chr6	63322018	63322190
#Deleted in new
chr6	63696906	63697090
#Deleted in new
chr6	68414499	68414624
#Deleted in new
chr6	69149637	69149762
#Partially deleted in new
chr6	69477053	69477289
#Deleted in new
chr6	70861873	70862003
#Deleted in new
chr6	70877590	70877755
#Deleted in new
chr6	70934594	70934874
#Deleted in new
chr6	74823131	74823256
#Deleted in new
chr6	75417490	75417858
#Deleted in new
chr6	76702492	76702617
#Deleted in new
chr6	76778324	76778479
#Partially deleted in new
chr6	76802832	76803045
#Partially deleted in new
chr7	1132646	1132771
#Deleted in new
chr7	2792881	2793006
#Partially deleted in new
chr7	2825732	2825909
#Deleted in new
chr7	3378358	3378548
#Deleted in new
chr7	5599714	5599881
#Deleted in new
chr7	5810602	5810938
#Deleted in new
chr7	5879369	5879494
#Deleted in new
chr7	6286173	6286446
#Deleted in new
chr7	6486033	6486260
#Deleted in new
chr7	9863838	9864274
#Partially deleted in new
chr7	9901402	9901559
#Partially deleted in new
chr7	10246258	10246409
#Partially deleted in new
chr7	10299306	10299431
#Deleted in new
chr7	10618942	10619156
#Deleted in new
chr7	11914024	11914149
#Deleted in new
chr7	12544883	12545119
#Duplicated in new
chr7	13114338	13114523
#Deleted in new
chr7	14023550	14023675
#Deleted in new
chr7	14173024	14173151
#Deleted in new
chr7	14653398	14653595
#Deleted in new
chr7	14673879	14674070
#Deleted in new
chr7	15901663	15901911
#Deleted in new
chr7	16305075	16305255
#Deleted in new
chr7	16400713	16400914
#Deleted in new
chr7	17009125	17009270
#Partially deleted in new
chr7	17357984	17358149
#Deleted in new
chr7	17966594	17966746
#Deleted in new
chr7	18392551	18392838
#Deleted in new
chr7	19611791	19611925
#Deleted in new
chr7	20800878	20801048
#Partially deleted in new
chr7	20820565	20820729
#Deleted in new
chr7	21089132	21089257
#Partially deleted in new
chr7	21134394	21134651
#Deleted in new
chr7	21260816	21260941
#Deleted in new
chr7	21399240	21399367
#Deleted in new
chr7	23325874	23326001
#Deleted in new
chr7	23656575	23656700
#Deleted in new
chr7	25510619	25510749
#Deleted in new
chr7	26411417	26411699
#Duplicated in new
chr7	27198502	27198735
#Deleted in new
chr7	27598590	27598786
#Deleted in new
chr7	29372918	29373046
#Deleted in new
chr7	30588504	30588653
#Deleted in new
chr7	30656128	30656309
#Deleted in new
chr7	30892748	30892877
#Deleted in new
chr7	30893005	30893237
#Partially deleted in new
chr7	31076948	31077130
#Deleted in new
chr7	31099455	31099580
#Deleted in new
chr7	31311720	31311948
#Deleted in new
chr7	31375695	31375911
#Deleted in new
chr7	33820757	33821003
#Deleted in new
chr7	34075538	34075663
#Deleted in new
chr7	35502604	35502768
#Deleted in new
chr7	35538007	35538263
#Deleted in new
chr7	35784290	35784416
#Deleted in new
chr7	36599895	36600115
#Deleted in new
chr7	36734325	36734580
#Deleted in new
chr7	37031349	37031474
#Deleted in new
chr7	37421729	37421854
#Deleted in new
chr7	37430775	37430900
#Deleted in new
chr7	37828157	37828307
#Partially deleted in new
chr7	37944087	37944320
#Partially deleted in new
chr7	38176907	38177032
#Partially deleted in new
chr7	38491922	38492087
#Deleted in new
chr7	39023374	39023499
#Deleted in new
chr7	39262375	39262567
#Deleted in new
chr7	39269332	39269550
#Deleted in new
chr7	39330977	39331135
#Partially deleted in new
chr7	39908423	39908637
#Deleted in new
chr7	40471650	40471807
#Deleted in new
chr7	40595901	40596176
#Deleted in new
chr7	40779350	40779475
#Deleted in new
chr7	40803554	40803945
#Deleted in new
chr7	40902482	40902746
#Deleted in new
chr7	41639927	41640154
#Deleted in new
chr7	41857293	41857488
#Deleted in new
chr7	41872708	41872833
#Deleted in new
chr7	42250875	42251069
#Deleted in new
chr7	42653218	42653441
#Deleted in new
chr7	42712782	42712918
#Deleted in new
chr7	42965471	42965670
#Deleted in new
chr7	43092146	43092274
#Deleted in new
chr7	43152405	43152646
#Deleted in new
chr7	43158397	43158655
#Partially deleted in new
chr7	43227245	43227370
#Deleted in new
chr7	43316024	43316192
#Deleted in new
chr7	43539290	43539513
#Deleted in new
chr7	44415360	44415539
#Deleted in new
chr7	44754045	44754224
#Deleted in new
chr7	44956843	44957004
#Deleted in new
chr7	53243919	53244132
#Partially deleted in new
chr7	53410452	53410643
#Deleted in new
chr7	54093503	54093672
#Partially deleted in new
chr7	54345147	54345370
#Deleted in new
chr7	54369925	54370082
#Deleted in new
chr7	54680005	54680220
#Deleted in new
chr7	54838908	54839061
#Deleted in new
chr7	57661149	57661382
#Partially deleted in new
chr7	57840489	57840659
#Deleted in new
chr7	57924876	57925070
#Deleted in new
chr7	57978341	57978578
#Partially deleted in new
chr7	62383393	62383581
#Deleted in new
chr7	64185393	64185571
#Deleted in new
chr7	64399636	64399761
#Deleted in new
chr7	64629133	64629258
#Partially deleted in new
chr7	65127510	65127713
#Deleted in new
chr7	65191246	65191534
#Deleted in new
chr7	65204389	65204514
#Deleted in new
chr7	65325992	65326152
#Deleted in new
chr7	65845737	65845961
#Deleted in new
chr7	66386344	66386504
#Deleted in new
chr7	66799787	66799938
#Deleted in new
chr7	67181265	67181495
#Deleted in new
chr7	69322221	69322448
#Partially deleted in new
chr7	69903021	69903260
#Deleted in new
chr7	70248323	70248497
#Deleted in new
chr7	70517045	70517177
#Partially deleted in new
chr7	72766403	72766604
#Deleted in new
chr7	73391785	73391961
#Deleted in new
chr7	73511315	73511440
#Partially deleted in new
chr7	74018448	74018636
#Deleted in new
chr7	75345721	75345891
#Partially deleted in new
chr7	76068999	76069243
#Deleted in new
chr7	77570521	77570646
#Deleted in new
chr7	77794668	77794814
#Deleted in new
chr7	78337201	78337491
#Deleted in new
chr7	78652390	78652644
#Deleted in new
chr7	78960869	78961019
#Deleted in new
chr7	79065562	79065706
#Deleted in new
chr7	79085274	79085399
#Deleted in new
chr7	80837990	80838136
#Deleted in new
chr8	151833	151964
#Deleted in new
chr8	877824	878088
#Deleted in new
chr8	979750	980034
#Partially deleted in new
chr8	1118817	1118958
#Deleted in new
chr8	1212909	1213093
#Deleted in new
chr8	1832492	1832617
#Deleted in new
chr8	2152514	2152780
#Deleted in new
chr8	2749423	2749611
#Partially deleted in new
chr8	2994964	2995097
#Partially deleted in new
chr8	3267720	3267874
#Deleted in new
chr8	3491770	3491981
#Deleted in new
chr8	3701625	3701779
#Deleted in new
chr8	4032309	4032547
#Deleted in new
chr8	4326180	4326550
#Deleted in new
chr8	4355350	4355488
#Deleted in new
chr8	4356524	4356777
#Deleted in new
chr8	4544666	4544908
#Deleted in new
chr8	10109869	10110145
#Deleted in new
chr8	10513698	10513823
#Deleted in new
chr8	10529903	10530111
#Partially deleted in new
chr8	13192546	13192852
#Deleted in new
chr8	13998780	13998907
#Deleted in new
chr8	14046797	14046951
#Deleted in new
chr8	14316898	14317075
#Deleted in new
chr8	16996668	16996817
#Deleted in new
chr8	17235863	17236089
#Deleted in new
chr8	17236408	17236533
#Deleted in new
chr8	17563579	17563726
#Deleted in new
chr8	17850712	17850837
#Deleted in new
chr8	17996358	17996483
#Partially deleted in new
chr8	18992828	18993018
#Deleted in new
chr8	20082518	20082662
#Deleted in new
chr8	21568671	21568806
#Deleted in new
chr8	21671222	21671347
#Deleted in new
chr8	23776132	23776265
#Deleted in new
chr8	23934995	23935167
#Deleted in new
chr8	25539332	25539457
#Deleted in new
chr8	26990951	26991133
#Deleted in new
chr8	27270455	27270876
#Deleted in new
chr8	28361424	28361571
#Deleted in new
chr8	29045710	29045835
#Duplicated in new
chr8	29374297	29374506
#Deleted in new
chr8	30061742	30061955
#Deleted in new
chr8	31281966	31282141
#Deleted in new
chr8	32003841	32004057
#Duplicated in new
chr8	32765598	32765996
#Deleted in new
chr8	33009176	33009390
#Deleted in new
chr8	35161219	35161429
#Partially deleted in new
chr8	35269988	35270162
#Duplicated in new
chr8	35655129	35655361
#Deleted in new
chr8	36680891	36681035
#Deleted in new
chr8	37850629	37850866
#Deleted in new
chr8	38098723	38098901
#Deleted in new
chr8	38131653	38131816
#Deleted in new
chr8	38180872	38181086
#Deleted in new
chr8	38220695	38220832
#Deleted in new
chr8	38703242	38703367
#Deleted in new
chr8	38841521	38841753
#Deleted in new
chr8	39028032	39028157
#Deleted in new
chr8	39746086	39746237
#Deleted in new
chr8	40655533	40655658
#Deleted in new
chr8	40806967	40807092
#Deleted in new
chr8	41101883	41102008
#Deleted in new
chr8	41244747	41244889
#Deleted in new
chr8	41429848	41429973
#Deleted in new
chr8	41430026	41430230
#Deleted in new
chr8	41469114	41469348
#Partially deleted in new
chr8	41499617	41499742
#Partially deleted in new
chr8	41635075	41635227
#Partially deleted in new
chr8	42951444	42951662
#Deleted in new
chr8	43601345	43601770
#Partially deleted in new
chr8	44616215	44616384
#Deleted in new
chr8	44764105	44764291
#Deleted in new
chr8	45389533	45389658
#Deleted in new
chr8	46550277	46550402
#Deleted in new
chr8	46811364	46811636
#Deleted in new
chr8	46916880	46917054
#Deleted in new
chr8	46923685	46923822
#Deleted in new
chr8	47202498	47202650
#Deleted in new
chr8	47644981	47645180
#Deleted in new
chr8	48351616	48351741
#Partially deleted in new
chr8	49057524	49057706
#Deleted in new
chr8	49653674	49653799
#Deleted in new
chr8	50197131	50197296
#Deleted in new
chr8	50691762	50692039
#Partially deleted in new
chr8	52641118	52641256
#Deleted in new
chr8	53042852	53043021
#Partially deleted in new
chr8	53343860	53343990
#Deleted in new
chr8	53838237	53838439
#Deleted in new
chr8	59450204	59450329
#Deleted in new
chr8	59509376	59509502
#Partially deleted in new
chr8	59818267	59818421
#Deleted in new
chr8	61349752	61349881
#Partially deleted in new
chr8	61351873	61352067
#Deleted in new
chr8	62014249	62014392
#Partially deleted in new
chr8	62049942	62050101
#Duplicated in new
chr8	62058289	62058439
#Deleted in new
chr8	62081545	62081670
#Partially deleted in new
chr8	62247207	62247364
#Deleted in new
chr8	63323166	63323391
#Deleted in new
chr8	63454833	63455118
#Deleted in new
chr8	65109379	65109504
#Deleted in new
chr8	65237106	65237241
#Deleted in new
chr8	67869515	67869711
#Deleted in new
chr8	68420819	68421057
#Deleted in new
chr8	68442224	68442485
#Deleted in new
chr8	68551014	68551168
#Deleted in new
chr8	68551208	68551434
#Deleted in new
chr8	69778333	69778574
#Deleted in new
chr8	69787628	69787793
#Deleted in new
chr8	69792426	69792575
#Deleted in new
chr8	69814232	69814433
#Deleted in new
chr8	69987877	69988002
#Deleted in new
chr8	70217151	70217276
#Deleted in new
chr8	70253338	70253570
#Deleted in new
chr8	70651568	70651792
#Partially deleted in new
chr8	70766987	70767132
#Deleted in new
chr8	70804002	70804127
#Deleted in new
chr8	71006208	71006465
#Deleted in new
chr8	71018225	71018455
#Deleted in new
chr8	71084807	71085029
#Deleted in new
chr8	71123392	71123538
#Deleted in new
chr8	71624685	71624910
#Deleted in new
chr8	71741135	71741263
#Deleted in new
chr8	72355917	72356123
#Partially deleted in new
chr8	72370659	72370849
#Deleted in new
chr8	72472508	72472633
#Deleted in new
chr8	72476522	72476699
#Deleted in new
chr9	12722	12901
#Deleted in new
chr9	153913	154099
#Deleted in new
chr9	170010	170294
#Partially deleted in new
chr9	216048	216307
#Deleted in new
chr9	287697	287822
#Partially deleted in new
chr9	1214620	1214745
#Deleted in new
chr9	1865466	1866161
#Deleted in new
chr9	1887062	1887187
#Partially deleted in new
chr9	2527444	2527765
#Deleted in new
chr9	2544308	2544636
#Deleted in new
chr9	2572353	2572590
#Deleted in new
chr9	2762374	2762606
#Deleted in new
chr9	3027501	3027629
#Partially deleted in new
chr9	3664211	3664405
#Deleted in new
chr9	3702354	3702491
#Deleted in new
chr9	3702954	3703193
#Deleted in new
chr9	4834470	4834595
#Deleted in new
chr9	4834644	4834773
#Partially deleted in new
chr9	5083690	5083973
#Deleted in new
chr9	5098482	5098634
#Deleted in new
chr9	5199055	5199180
#Deleted in new
chr9	5358923	5359142
#Deleted in new
chr9	5764485	5764643
#Deleted in new
chr9	5850735	5850959
#Deleted in new
chr9	5948420	5948545
#Deleted in new
chr9	6160502	6160778
#Deleted in new
chr9	7238173	7238418
#Deleted in new
chr9	8606597	8606791
#Deleted in new
chr9	9360092	9360331
#Duplicated in new
chr9	9365676	9365900
#Deleted in new
chr9	9378037	9378203
#Deleted in new
chr9	9392843	9392995
#Deleted in new
chr9	9904003	9904128
#Deleted in new
chr9	10523284	10523614
#Deleted in new
chr9	11704913	11705085
#Deleted in new
chr9	12010075	12010209
#Deleted in new
chr9	12243315	12243512
#Deleted in new
chr9	12402737	12402862
#Deleted in new
chr9	12443146	12443271
#Deleted in new
chr9	12567185	12567482
#Deleted in new
chr9	14044309	14044512
#Deleted in new
chr9	14105110	14105245
#Deleted in new
chr9	14198326	14198726
#Deleted in new
chr9	14661287	14661532
#Deleted in new
chr9	15223948	15224131
#Deleted in new
chr9	18466416	18466673
#Partially deleted in new
chr9	18466742	18466976
#Deleted in new
chr9	19245842	19246022
#Deleted in new
chr9	19354857	19355040
#Deleted in new
chr9	19860753	19860878
#Partially deleted in new
chr9	19991265	19991456
#Deleted in new
chr9	19992950	19993174
#Deleted in new
chr9	22202466	22202634
#Duplicated in new
chr9	22210675	22210902
#Deleted in new
chr9	22342552	22342677
#Deleted in new
chr9	23037832	23037957
#Partially deleted in new
chr9	23927139	23927283
#Deleted in new
chr9	24370048	24370198
#Partially deleted in new
chr9	25362229	25362490
#Deleted in new
chr9	25438742	25438881
#Partially deleted in new
chr9	26026331	26026456
#Deleted in new
chr9	26121325	26121493
#Deleted in new
chr9	26280050	26280236
#Partially deleted in new
chr9	26369934	26370066
#Partially deleted in new
chr9	26604924	26605083
#Deleted in new
chr9	27040062	27040187
#Deleted in new
chr9	27105860	27106138
#Partially deleted in new
chr9	27543429	27543595
#Deleted in new
chr9	28109679	28109804
#Deleted in new
chr9	28143444	28143577
#Deleted in new
chr9	29954130	29954352
#Deleted in new
chr9	31764752	31765088
#Deleted in new
chr9	31838930	31839069
#Deleted in new
chr9	32822777	32822924
#Partially deleted in new
chr9	32941550	32941746
#Deleted in new
chr9	33252328	33252506
#Deleted in new
chr9	33252973	33253167
#Deleted in new
chr9	33253208	33253333
#Deleted in new
chr9	33276903	33277136
#Deleted in new
chr9	33474851	33475031
#Deleted in new
chr9	33659456	33659630
#Deleted in new
chr9	33700193	33700318
#Deleted in new
chr9	33822020	33822235
#Partially deleted in new
chr9	33825549	33825679
#Deleted in new
chr9	34335914	34336039
#Deleted in new
chr9	34346719	34346869
#Deleted in new
chr9	34347053	34347286
#Deleted in new
chr9	34545918	34546123
#Deleted in new
chr9	35344967	35345092
#Deleted in new
chr9	36647949	36648092
#Deleted in new
chr9	37648323	37648584
#Deleted in new
chr9	37649492	37649813
#Deleted in new
chr9	37746579	37746819
#Partially deleted in new
chr9	38038748	38038901
#Deleted in new
chr9	38402406	38402531
#Deleted in new
chr9	39041542	39041667
#Deleted in new
chr9	39077417	39077585
#Deleted in new
chr9	40032970	40033268
#Deleted in new
chr9	40112548	40112706
#Deleted in new
chr9	40530815	40530967
#Deleted in new
chr9	40704027	40704191
#Deleted in new
chr9	40739973	40740202
#Partially deleted in new
chr9	41261726	41261940
#Deleted in new
chr9	41900062	41900216
#Deleted in new
chr9	42245394	42245598
#Deleted in new
chr9	42670287	42670450
#Deleted in new
chr9	42807941	42808079
#Deleted in new
chr9	42908368	42908550
#Partially deleted in new
chr9	42941213	42941451
#Deleted in new
chr9	43469700	43469825
#Deleted in new
chr9	44900473	44900681
#Deleted in new
chr9	44943825	44944034
#Deleted in new
chr9	45329910	45330096
#Deleted in new
chr9	45954340	45954549
#Deleted in new
chr9	45970897	45971040
#Deleted in new
chr9	46391047	46391201
#Deleted in new
chr9	47026688	47026914
#Partially deleted in new
chr9	47349338	47349637
#Deleted in new
chr9	47769523	47769758
#Deleted in new
chr9	47888574	47888864
#Deleted in new
chr9	48024720	48024950
#Deleted in new
chr9	48026593	48026790
#Deleted in new
chr9	48090867	48090992
#Partially deleted in new
chr9	48101995	48102120
#Duplicated in new
chr9	48312193	48312340
#Deleted in new
chr9	48317289	48317503
#Deleted in new
chr9	48550555	48550719
#Deleted in new
chr9	48706955	48707128
#Deleted in new
chr9	48716171	48716429
#Deleted in new
chr9	48804084	48804226
#Deleted in new
chr9	48870622	48870833
#Partially deleted in new
chr9	49124528	49124740
#Deleted in new
chr9	49177197	49177322
#Deleted in new
chr9	49179699	49179992
#Deleted in new
chr9	49612639	49612788
#Deleted in new
chr9	49757245	49757406
#Deleted in new
chr9	50600073	50600233
#Deleted in new
chr9	51401936	51402061
#Deleted in new
chr9	51402158	51402425
#Partially deleted in new
chr9	51855087	51855228
#Deleted in new
chr9	53280464	53280599
#Deleted in new
chr9	53397129	53397340
#Deleted in new
chr9	53475207	53475457
#Deleted in new
chr9	53563310	53563466
#Deleted in new
chr9	53563617	53563904
#Deleted in new
chr9	53817607	53817732
#Deleted in new
chr9	54235398	54235538
#Deleted in new
chr9	54775451	54775645
#Deleted in new
chr9	55205327	55205452
#Deleted in new
chr9	55218765	55218890
#Duplicated in new
chr9	55225524	55225720
#Deleted in new
chr9	55408410	55408619
#Deleted in new
chr9	55429043	55429168
#Deleted in new
chr9	55988334	55988475
#Deleted in new
chr9	56480116	56480258
#Deleted in new
chr9	57814515	57814702
#Deleted in new
chr9	57841213	57841338
#Deleted in new
chr9	58281295	58281420
#Deleted in new
chr9	58312260	58312399
#Deleted in new
chr9	58832915	58833075
#Deleted in new
chr9	59419970	59420196
#Deleted in new
chr9	59729840	59729985
#Deleted in new
chrUn_AAEX03020982	17925	18057
#Deleted in new
chrUn_AAEX03020982	18141	18512
#Deleted in new
chrUn_AAEX03022141	7979	8115
#Deleted in new
chrUn_AAEX03023560	5235	5360
#Partially deleted in new
chrUn_AAEX03023755	3560	3790
#Deleted in new
chrUn_AAEX03024207	4270	4529
#Deleted in new
chrUn_AAEX03024207	4681	4806
#Partially deleted in new
chrUn_AAEX03024279	3501	3648
#Deleted in new
chrUn_AAEX03024957	1355	1480
#Deleted in new
chrUn_AAEX03025258	1700	1825
#Deleted in new
chrUn_AAEX03025511	393	558
#Deleted in new
chrUn_JH373239	522337	522471
#Deleted in new
chrUn_JH373242	481172	481377
#Deleted in new
chrUn_JH373243	28015	28166
#Deleted in new
chrUn_JH373243	159588	159713
#Deleted in new
chrUn_JH373243	241776	241971
#Deleted in new
chrUn_JH373278	276535	276740
#Deleted in new
chrUn_JH373304	126597	126765
#Deleted in new
chrUn_JH373329	40574	40948
#Deleted in new
chrUn_JH373335	157324	157503
#Deleted in new
chrUn_JH373335	223831	223965
#Partially deleted in new
chrUn_JH373336	25403	25555
#Deleted in new
chrUn_JH373367	6026	6153
#Deleted in new
chrUn_JH373372	26717	26847
#Deleted in new
chrUn_JH373471	5565	5690
#Deleted in new
chrUn_JH373507	40458	40592
#Deleted in new
chrUn_JH373583	5989	6252
#Deleted in new
chrUn_JH373683	27787	27995
#Deleted in new
chrUn_JH373704	476	618
#Deleted in new
chrUn_JH374124	8822	9070
#Deleted in new
chrX	760670	760799
#Deleted in new
chrX	812424	812677
#Deleted in new
chrX	870945	871265
#Deleted in new
chrX	909561	909698
#Deleted in new
chrX	917592	917861
#Deleted in new
chrX	1005280	1005481
#Deleted in new
chrX	1353273	1353398
#Deleted in new
chrX	1371342	1371632
#Deleted in new
chrX	1437428	1437596
#Deleted in new
chrX	6413974	6414115
#Deleted in new
chrX	8358375	8358500
#Deleted in new
chrX	9729261	9729458
#Deleted in new
chrX	10332468	10332597
#Deleted in new
chrX	12558773	12558908
#Deleted in new
chrX	13298960	13299214
#Partially deleted in new
chrX	15321666	15321851
#Deleted in new
chrX	15325339	15325676
#Partially deleted in new
chrX	17699692	17699821
#Deleted in new
chrX	19592991	19593116
#Deleted in new
chrX	19700261	19700398
#Deleted in new
chrX	19702823	19703027
#Deleted in new
chrX	23335806	23336009
#Partially deleted in new
chrX	24900669	24900794
#Deleted in new
chrX	25876015	25876211
#Deleted in new
chrX	28801728	28801853
#Deleted in new
chrX	29280403	29280576
#Deleted in new
chrX	29648362	29648487
#Deleted in new
chrX	30361189	30361314
#Deleted in new
chrX	31455763	31455904
#Deleted in new
chrX	35497357	35497651
#Deleted in new
chrX	35913551	35913686
#Deleted in new
chrX	37622203	37622416
#Deleted in new
chrX	39203376	39203501
#Deleted in new
chrX	40062765	40062983
#Deleted in new
chrX	40302019	40302276
#Deleted in new
chrX	40853892	40854111
#Deleted in new
chrX	41079836	41079975
#Deleted in new
chrX	41107443	41107634
#Deleted in new
chrX	41165889	41166014
#Deleted in new
chrX	41290503	41290742
#Deleted in new
chrX	41507014	41507154
#Deleted in new
chrX	41524431	41524638
#Deleted in new
chrX	41611020	41611231
#Deleted in new
chrX	41611368	41611539
#Deleted in new
chrX	41844902	41845082
#Deleted in new
chrX	42146924	42147053
#Deleted in new
chrX	42887136	42887342
#Deleted in new
chrX	43716169	43716294
#Deleted in new
chrX	44526314	44526591
#Partially deleted in new
chrX	44859804	44860031
#Deleted in new
chrX	45182848	45182973
#Deleted in new
chrX	45549259	45549495
#Deleted in new
chrX	45998087	45998220
#Deleted in new
chrX	46350437	46350657
#Deleted in new
chrX	46383167	46383399
#Deleted in new
chrX	46525909	46526042
#Deleted in new
chrX	47858953	47859132
#Deleted in new
chrX	47882211	47882348
#Deleted in new
chrX	48548679	48548952
#Deleted in new
chrX	48823511	48823743
#Deleted in new
chrX	49739667	49739907
#Deleted in new
chrX	49901840	49901989
#Deleted in new
chrX	51642099	51642224
#Deleted in new
chrX	51894385	51894510
#Deleted in new
chrX	52637151	52637529
#Deleted in new
chrX	54040653	54040823
#Deleted in new
chrX	55054053	55054252
#Deleted in new
chrX	56768884	56769009
#Deleted in new
chrX	56819594	56819891
#Deleted in new
chrX	57519371	57519517
#Deleted in new
chrX	58144238	58144488
#Deleted in new
chrX	58196864	58197148
#Deleted in new
chrX	59263083	59263208
#Deleted in new
chrX	59737834	59737959
#Deleted in new
chrX	60362437	60362562
#Deleted in new
chrX	61153314	61153473
#Deleted in new
chrX	62221750	62221943
#Deleted in new
chrX	64522697	64522969
#Deleted in new
chrX	64621665	64621790
#Deleted in new
chrX	64894234	64894444
#Deleted in new
chrX	65822899	65823117
#Deleted in new
chrX	67624606	67624785
#Deleted in new
chrX	67753814	67754065
#Deleted in new
chrX	67783138	67783269
#Deleted in new
chrX	68992806	68993052
#Deleted in new
chrX	69514262	69514570
#Deleted in new
chrX	69544856	69544990
#Deleted in new
chrX	69762106	69762297
#Deleted in new
chrX	69877958	69878094
#Deleted in new
chrX	71606292	71606454
#Deleted in new
chrX	74606405	74606641
#Duplicated in new
chrX	75463906	75464126
#Deleted in new
chrX	75672304	75672438
#Deleted in new
chrX	75899780	75899989
#Deleted in new
chrX	79553909	79554176
#Duplicated in new
chrX	79713201	79713432
#Deleted in new
chrX	80367299	80367424
#Partially deleted in new
chrX	82941008	82941157
#Deleted in new
chrX	86574710	86574913
#Deleted in new
chrX	87649520	87649748
#Deleted in new
chrX	88360064	88360189
#Deleted in new
chrX	90308486	90308614
#Deleted in new
chrX	91352907	91353171
#Deleted in new
chrX	91645849	91646100
#Deleted in new
chrX	91813153	91813303
#Deleted in new
chrX	91878553	91878792
#Deleted in new
chrX	91892201	91892326
#Deleted in new
chrX	91892789	91892970
#Deleted in new
chrX	91996485	91996696
#Deleted in new
chrX	92479405	92479546
#Deleted in new
chrX	95309286	95309457
#Deleted in new
chrX	98076481	98076606
#Deleted in new
chrX	99938864	99939034
#Deleted in new
chrX	105853888	105854095
#Deleted in new
chrX	106103987	106104112
#Deleted in new
chrX	106166154	106166290
#Deleted in new
chrX	106243869	106244004
#Deleted in new
chrX	106300868	106301057
#Deleted in new
chrX	107058463	107058603
#Deleted in new
chrX	107231960	107232169
#Deleted in new
chrX	107232219	107232344
#Deleted in new
chrX	107253979	107254196
#Deleted in new
chrX	108622416	108622633
#Deleted in new
chrX	109500682	109500909
#Deleted in new
chrX	110961082	110961207
#Deleted in new
chrX	111411093	111411300
#Deleted in new
chrX	119201212	119201337
#Deleted in new
chrX	120024285	120024410
#Deleted in new
chrX	120638230	120638453
#Deleted in new
chrX	121483809	121483976
#Deleted in new
chrX	122593576	122593824
#Deleted in new
chrX	123458015	123458151
#Partially deleted in new
chrX	123808390	123808590