python /oak/stanford/groups/akundaje/marinovg/code/ChIP/TFOverlapMatrix.py CTCF.CUT_and_RUN_N-ChIP.MACS2.overlap.files CTCF.CUT_and_RUN_N-ChIP.MACS2.overlap.files CTCF.CUT_and_RUN_N-ChIP.MACS2.overlap.table
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/TFOverlapMatrix.py CTCF.CUT_and_RUN_N-ChIP.MACS2.overlap.files CTCF.ENCODE.overlap.files CTCF.CUT_and_RUN_N-ChIP-vs-CTCF-ENCODE.overlap.table
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/TFOverlapMatrix.py CTCF.ENCODE.overlap.files CTCF.ENCODE.overlap.files CTCF-ENCODE.overlap.table