File accession File format Output type Experiment accession Assay Biosample term id Biosample term name Biosample type Biosample life stage Biosample sex Biosample Age Biosample organism Biosample treatments Biosample subcellular fraction term name Biosample phase Biosample synchronization stage Experiment target Antibody accession Library made from Library depleted in Library extraction method Library lysis method Library crosslinking method Library strand specific Experiment date released Project RBNS protein concentration Library fragmentation method Library size range Biological replicate(s) Technical replicate Read length Mapped read length Run type Paired end Paired with Derived from Size Lab md5sum dbxrefs File download URL Assembly Platform Controlled by File Status Audit WARNING Audit INTERNAL_ACTION Audit NOT_COMPLIANT Audit ERROR ENCFF002CER bed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 471008 ENCODE Consortium Analysis Working Group 72b25cc6efcdb2305f20e2fcdad29a58 https://www.encodeproject.org/files/ENCFF002CER/@@download/ENCFF002CER.bed.gz hg19 archived mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from insufficient replicate concordance extremely low read length ENCFF100WXV bed narrowPeak conservative idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF001TDO, ENCFF192RQZ, ENCFF430CBL, ENCFF739TWP 257274 ENCODE Processing Pipeline ab28ccd801d27dbd54fb35b2382fc226 https://www.encodeproject.org/files/ENCFF100WXV/@@download/ENCFF100WXV.bed.gz hg19 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF626KTJ bed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF001TDO, ENCFF192RQZ, ENCFF430CBL, ENCFF739TWP 514874 ENCODE Processing Pipeline cd4e59b9e70e529ce4a9b478d544124a https://www.encodeproject.org/files/ENCFF626KTJ/@@download/ENCFF626KTJ.bed.gz hg19 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF739TWP bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF319GFP, ENCFF845EFA 6501404 ENCODE Processing Pipeline 860d76c0cd5d8dcce10658f8a1dcfaa6 https://www.encodeproject.org/files/ENCFF739TWP/@@download/ENCFF739TWP.bed.gz hg19 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF192RQZ bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF121RMK, ENCFF245PJA, ENCFF319GFP, ENCFF845EFA 6995318 ENCODE Processing Pipeline 10501d436f31125cd55d5c35f81a0041 https://www.encodeproject.org/files/ENCFF192RQZ/@@download/ENCFF192RQZ.bed.gz hg19 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF430CBL bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 3 ENCFF121RMK, ENCFF245PJA, ENCFF319GFP 5748212 ENCODE Processing Pipeline ca3f630f6788e9fdfc49f5649995d014 https://www.encodeproject.org/files/ENCFF430CBL/@@download/ENCFF430CBL.bed.gz hg19 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF952YYL bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF302WSZ, ENCFF509IQQ 6985074 ENCODE Processing Pipeline 9ecea3e906c483200974c5509a175081 https://www.encodeproject.org/files/ENCFF952YYL/@@download/ENCFF952YYL.bed.gz GRCh38 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF952YDR bed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF250MHG, ENCFF419RSJ, ENCFF460IWD, ENCFF952YYL 507030 ENCODE Processing Pipeline 93137eae8a0a7e4817a43790e41b0849 https://www.encodeproject.org/files/ENCFF952YDR/@@download/ENCFF952YDR.bed.gz GRCh38 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF250MHG bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 3 ENCFF302WSZ 5597610 ENCODE Processing Pipeline 58906dff9cc275b97776b0ff2fcf64e8 https://www.encodeproject.org/files/ENCFF250MHG/@@download/ENCFF250MHG.bed.gz GRCh38 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF225IZQ bed narrowPeak conservative idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF250MHG, ENCFF419RSJ, ENCFF460IWD, ENCFF952YYL 260477 ENCODE Processing Pipeline f006d8e7bbc432bde7a13efd4c5c8639 https://www.encodeproject.org/files/ENCFF225IZQ/@@download/ENCFF225IZQ.bed.gz GRCh38 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF460IWD bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHF8-human ENCAB757LUG, ENCAB000AJX DNA see document see document False 2012-03-06 ENCODE 2 ENCFF509IQQ 6500610 ENCODE Processing Pipeline 92b2a0783bec6379ed050421e7f6fc4f https://www.encodeproject.org/files/ENCFF460IWD/@@download/ENCFF460IWD.bed.gz GRCh38 released mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking insufficient replicate concordance extremely low read length ENCFF882SPG bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF187ZET 5572049 ENCODE Processing Pipeline 8ed5f312510237898a4738a68929e967 https://www.encodeproject.org/files/ENCFF882SPG/@@download/ENCFF882SPG.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF710ZCP bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF198RTF 5432172 ENCODE Processing Pipeline 9e5955d134101cef2ce371de4277f59c https://www.encodeproject.org/files/ENCFF710ZCP/@@download/ENCFF710ZCP.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF789EHD bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF187ZET, ENCFF198RTF 6486284 ENCODE Processing Pipeline df9a0a4c79bf348e5f98e0e651103fa7 https://www.encodeproject.org/files/ENCFF789EHD/@@download/ENCFF789EHD.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF145JGI bed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF710ZCP, ENCFF789EHD, ENCFF882SPG 443904 ENCODE Processing Pipeline 410cab9475562ecb0983a3868f1dbe82 https://www.encodeproject.org/files/ENCFF145JGI/@@download/ENCFF145JGI.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF312XHI bed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF710ZCP, ENCFF789EHD, ENCFF882SPG 496400 ENCODE Processing Pipeline e9f3b1cbd2dddf9944661d8825db571a https://www.encodeproject.org/files/ENCFF312XHI/@@download/ENCFF312XHI.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF813HVG bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF103CZU, ENCFF578ISP, ENCFF727QOD 6490731 ENCODE Processing Pipeline 45b800c16bc87fd82dee37aacac4f078 https://www.encodeproject.org/files/ENCFF813HVG/@@download/ENCFF813HVG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF496KKT bed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF552ZAY, ENCFF803FZY, ENCFF813HVG 442923 ENCODE Processing Pipeline 0dec633c4a828f77ca7f75e4fbef4747 https://www.encodeproject.org/files/ENCFF496KKT/@@download/ENCFF496KKT.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF803FZY bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF103CZU, ENCFF578ISP 5583357 ENCODE Processing Pipeline b465b7c2b84f5f8fb8b676d502b35b66 https://www.encodeproject.org/files/ENCFF803FZY/@@download/ENCFF803FZY.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF552ZAY bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF727QOD 5439753 ENCODE Processing Pipeline cd17067a85d52f2050be5d06ce0f6a33 https://www.encodeproject.org/files/ENCFF552ZAY/@@download/ENCFF552ZAY.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF495MHZ bed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF552ZAY, ENCFF803FZY, ENCFF813HVG 486318 ENCODE Processing Pipeline 7a79922b588af54d6245ba1711aac16f https://www.encodeproject.org/files/ENCFF495MHZ/@@download/ENCFF495MHZ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF387MDX bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033UID, ENCFF412DRO 7184179 ENCODE Processing Pipeline 3fd2a3ed842a80455970f014fbf56c10 https://www.encodeproject.org/files/ENCFF387MDX/@@download/ENCFF387MDX.bed.gz GRCh38 released antibody characterized with exemption ENCFF610YNO bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033UID 6394031 ENCODE Processing Pipeline bcf49f2753707148c025f7cd24f8f2a2 https://www.encodeproject.org/files/ENCFF610YNO/@@download/ENCFF610YNO.bed.gz GRCh38 released antibody characterized with exemption ENCFF904ELN bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF412DRO 6800130 ENCODE Processing Pipeline 390ee1ca8c1ea1096b445e6e99f9980b https://www.encodeproject.org/files/ENCFF904ELN/@@download/ENCFF904ELN.bed.gz GRCh38 released antibody characterized with exemption ENCFF548ITQ bed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF387MDX, ENCFF419RSJ, ENCFF610YNO, ENCFF904ELN 300978 ENCODE Processing Pipeline b9119c3ba9d91361e3b906e073ad32e3 https://www.encodeproject.org/files/ENCFF548ITQ/@@download/ENCFF548ITQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF069AAY bed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF387MDX, ENCFF419RSJ, ENCFF610YNO, ENCFF904ELN 400019 ENCODE Processing Pipeline 4fae0f8dac0d78ddbd10368544c7f6a5 https://www.encodeproject.org/files/ENCFF069AAY/@@download/ENCFF069AAY.bed.gz GRCh38 released antibody characterized with exemption ENCFF410JJC bed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF131YKB, ENCFF235FTG, ENCFF875TQG 299981 ENCODE Processing Pipeline 994f8104a748fbc318af07ff06bd751c https://www.encodeproject.org/files/ENCFF410JJC/@@download/ENCFF410JJC.bed.gz hg19 released antibody characterized with exemption ENCFF131YKB bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF310TZE, ENCFF747SPK 6404445 ENCODE Processing Pipeline ce527a6d51afbb56bee2e1ff7aa357bf https://www.encodeproject.org/files/ENCFF131YKB/@@download/ENCFF131YKB.bed.gz hg19 released antibody characterized with exemption ENCFF875TQG bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF701AOA 6802573 ENCODE Processing Pipeline 51bb4cfa7573995a9a30f2d4d51524c1 https://www.encodeproject.org/files/ENCFF875TQG/@@download/ENCFF875TQG.bed.gz hg19 released antibody characterized with exemption ENCFF235FTG bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF310TZE, ENCFF701AOA, ENCFF747SPK 7184972 ENCODE Processing Pipeline ebea0ab3ee602810ee67f0f4c8e5709b https://www.encodeproject.org/files/ENCFF235FTG/@@download/ENCFF235FTG.bed.gz hg19 released antibody characterized with exemption ENCFF178MOP bed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF131YKB, ENCFF235FTG, ENCFF875TQG 398842 ENCODE Processing Pipeline 8793c337b4cbb250f1ea3226f4282427 https://www.encodeproject.org/files/ENCFF178MOP/@@download/ENCFF178MOP.bed.gz hg19 released antibody characterized with exemption ENCFF001VOO bed narrowPeak peaks ENCSR000DOI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 19459 Kevin Struhl, HMS c5b18252c20c6aebc467656680c51d20 https://www.encodeproject.org/files/ENCFF001VOO/@@download/ENCFF001VOO.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CXW bed narrowPeak optimal idr thresholded peaks ENCSR000DOI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 30224 ENCODE Consortium Analysis Working Group 9d13b60b0b83cf1043c1fa5e719e66a5 https://www.encodeproject.org/files/ENCFF002CXW/@@download/ENCFF002CXW.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF642AZQ bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF469YUW, ENCFF800BIH 6908161 ENCODE Processing Pipeline df619303cb7cd7dd5aa205ccf8675504 https://www.encodeproject.org/files/ENCFF642AZQ/@@download/ENCFF642AZQ.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF910COF bed narrowPeak conservative idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF138QHW, ENCFF642AZQ, ENCFF923FBF 427638 ENCODE Processing Pipeline 431e0ad1d8469bf48bd6bf98ff3065d3 https://www.encodeproject.org/files/ENCFF910COF/@@download/ENCFF910COF.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF138QHW bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF469YUW, ENCFF658ADO 6967604 ENCODE Processing Pipeline 3332e75add43e3f65ea6492367248cb1 https://www.encodeproject.org/files/ENCFF138QHW/@@download/ENCFF138QHW.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF923FBF bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF469YUW, ENCFF658ADO, ENCFF800BIH 7258022 ENCODE Processing Pipeline 7635e09ee8a1201a82a81ebfe3ccb1e5 https://www.encodeproject.org/files/ENCFF923FBF/@@download/ENCFF923FBF.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF801YZV bed narrowPeak optimal idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF138QHW, ENCFF642AZQ, ENCFF923FBF 430559 ENCODE Processing Pipeline 21629fbc4edc4f436e21cde911048f95 https://www.encodeproject.org/files/ENCFF801YZV/@@download/ENCFF801YZV.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF717XWU bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF448DJP, ENCFF825VBC 6873192 ENCODE Processing Pipeline 1f57ba82231b59474d4751b8a434c3e6 https://www.encodeproject.org/files/ENCFF717XWU/@@download/ENCFF717XWU.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF357PZU bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF241ZAF, ENCFF448DJP 6781607 ENCODE Processing Pipeline 9e116b17ae83577de98675a3ee3e8457 https://www.encodeproject.org/files/ENCFF357PZU/@@download/ENCFF357PZU.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF026FEJ bed narrowPeak conservative idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF357PZU, ENCFF419RSJ, ENCFF420GQF, ENCFF717XWU 429898 ENCODE Processing Pipeline c2331f927f2bc802a49835662479d625 https://www.encodeproject.org/files/ENCFF026FEJ/@@download/ENCFF026FEJ.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF420GQF bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF241ZAF, ENCFF448DJP, ENCFF825VBC 7240416 ENCODE Processing Pipeline 2bf2d97a56fc21758d740dae80bbcf2d https://www.encodeproject.org/files/ENCFF420GQF/@@download/ENCFF420GQF.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF922MYE bed narrowPeak optimal idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF357PZU, ENCFF419RSJ, ENCFF420GQF, ENCFF717XWU 431668 ENCODE Processing Pipeline 2e77a9768dd3084d806135f4607f3d3d https://www.encodeproject.org/files/ENCFF922MYE/@@download/ENCFF922MYE.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF001VRI bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 770970 Kevin White, UChicago 64b38546e77f71b87310cbeb7c3bf5d2 https://www.encodeproject.org/files/ENCFF001VRI/@@download/ENCFF001VRI.bed.gz hg19 archived low read depth, low read length missing derived_from, mismatched file status insufficient replicate concordance ENCFF002DDW bed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 259658 ENCODE Consortium Analysis Working Group 0418ee5601643d9817ef8322430bf64c https://www.encodeproject.org/files/ENCFF002DDW/@@download/ENCFF002DDW.bed.gz hg19 archived low read depth, low read length missing derived_from, mismatched file status insufficient replicate concordance ENCFF497LRA bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF082TOF, ENCFF240RBJ, ENCFF510BRO 6724265 ENCODE Processing Pipeline 5b959489a4fdb4f721d7a2695c3f6079 https://www.encodeproject.org/files/ENCFF497LRA/@@download/ENCFF497LRA.bed.gz GRCh38 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF960LWB bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF510BRO, ENCFF880ZXO 4392936 ENCODE Processing Pipeline 6df184b646ff792f12ea19a54b11110a https://www.encodeproject.org/files/ENCFF960LWB/@@download/ENCFF960LWB.bed.gz GRCh38 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF185LGX bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF479NOE, ENCFF647LGE, ENCFF998TMC 6732109 ENCODE Processing Pipeline 6389b0de0c4dd822db5e985c1821aee5 https://www.encodeproject.org/files/ENCFF185LGX/@@download/ENCFF185LGX.bed.gz hg19 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF776QVY bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF082TOF, ENCFF240RBJ, ENCFF510BRO, ENCFF880ZXO 6883715 ENCODE Processing Pipeline c941381935683b1e91a01147dee2df40 https://www.encodeproject.org/files/ENCFF776QVY/@@download/ENCFF776QVY.bed.gz GRCh38 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF766MMM bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF237CLM, ENCFF479NOE, ENCFF647LGE, ENCFF998TMC 6894146 ENCODE Processing Pipeline 1191f50298ae3451a569e328ac65e919 https://www.encodeproject.org/files/ENCFF766MMM/@@download/ENCFF766MMM.bed.gz hg19 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF444LYN bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF237CLM, ENCFF998TMC 4401824 ENCODE Processing Pipeline b2a6cdd23e21ed9fac80af72438d8161 https://www.encodeproject.org/files/ENCFF444LYN/@@download/ENCFF444LYN.bed.gz hg19 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF879REQ bed narrowPeak conservative idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF185LGX, ENCFF444LYN, ENCFF766MMM 160165 ENCODE Processing Pipeline f13dd0fa61360b2d42d1a03660019329 https://www.encodeproject.org/files/ENCFF879REQ/@@download/ENCFF879REQ.bed.gz hg19 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF997NUA bed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF419RSJ, ENCFF497LRA, ENCFF776QVY, ENCFF960LWB 367057 ENCODE Processing Pipeline 6e6fbb7e4e34db3c1698ef089d41790b https://www.encodeproject.org/files/ENCFF997NUA/@@download/ENCFF997NUA.bed.gz GRCh38 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF333IVK bed narrowPeak conservative idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF419RSJ, ENCFF497LRA, ENCFF776QVY, ENCFF960LWB 160956 ENCODE Processing Pipeline 8e08a706ad3498fd94909dc46d52daf0 https://www.encodeproject.org/files/ENCFF333IVK/@@download/ENCFF333IVK.bed.gz GRCh38 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF929YBC bed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF185LGX, ENCFF444LYN, ENCFF766MMM 366797 ENCODE Processing Pipeline c240b9984e20cb1538912c0c4aa2b41c https://www.encodeproject.org/files/ENCFF929YBC/@@download/ENCFF929YBC.bed.gz hg19 released low read depth, low read length mismatched file status insufficient replicate concordance ENCFF001VRH bed narrowPeak peaks ENCSR000DKB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 489269 Kevin White, UChicago 2a6280868b59db45c28f4bd94ab6c9da https://www.encodeproject.org/files/ENCFF001VRH/@@download/ENCFF001VRH.bed.gz hg19 archived low read depth, low read length missing derived_from ENCFF002DDV bed narrowPeak optimal idr thresholded peaks ENCSR000DKB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 250059 ENCODE Consortium Analysis Working Group 16ff22fbb3e4d51c95e323ee69490a75 https://www.encodeproject.org/files/ENCFF002DDV/@@download/ENCFF002DDV.bed.gz hg19 archived low read depth, low read length missing derived_from ENCFF002CMC bed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1187908 ENCODE Consortium Analysis Working Group ad3cebc9cc63d00128334a3f1539e7af https://www.encodeproject.org/files/ENCFF002CMC/@@download/ENCFF002CMC.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF335ASE bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178VEA, ENCFF913HVS 5205652 ENCODE Processing Pipeline 99b677e39d8e1bb71cf78b6c60adf7f3 https://www.encodeproject.org/files/ENCFF335ASE/@@download/ENCFF335ASE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF619NIZ bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF797FEY 6453589 ENCODE Processing Pipeline 51e6a3dc883808afb2060f66baf0b69a https://www.encodeproject.org/files/ENCFF619NIZ/@@download/ENCFF619NIZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF933FSJ bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178VEA, ENCFF797FEY 6711034 ENCODE Processing Pipeline 4b9450419227b060b82892d3876f7cef https://www.encodeproject.org/files/ENCFF933FSJ/@@download/ENCFF933FSJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF448ZSO bed narrowPeak conservative idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF335ASE, ENCFF419RSJ, ENCFF619NIZ, ENCFF933FSJ 909409 ENCODE Processing Pipeline 33fcc6e809237c1fb1bc3f66d008880e https://www.encodeproject.org/files/ENCFF448ZSO/@@download/ENCFF448ZSO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF900NVQ bed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF335ASE, ENCFF419RSJ, ENCFF619NIZ, ENCFF933FSJ 999894 ENCODE Processing Pipeline 601ed3798660585b840d49abb2d4cb1c https://www.encodeproject.org/files/ENCFF900NVQ/@@download/ENCFF900NVQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF001VRM bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 127185 Kevin White, UChicago 35973747f04c53456e53f30125e1ba96 https://www.encodeproject.org/files/ENCFF001VRM/@@download/ENCFF001VRM.bed.gz hg19 archived low read depth, low read length missing derived_from insufficient replicate concordance ENCFF585FBZ bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF108WAD, ENCFF387PPQ, ENCFF647LGE, ENCFF713KWF 6584202 ENCODE Processing Pipeline cca6ada00315104c0fa60b7e9ffd437d https://www.encodeproject.org/files/ENCFF585FBZ/@@download/ENCFF585FBZ.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF771WFB bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF108WAD, ENCFF647LGE, ENCFF713KWF 5969136 ENCODE Processing Pipeline 15028b121038cbdc39e9bb1a764f4b87 https://www.encodeproject.org/files/ENCFF771WFB/@@download/ENCFF771WFB.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF229ZGH bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF650RFL 5921871 ENCODE Processing Pipeline eb25eadb6111f8dbd9c08c1512a86b1a https://www.encodeproject.org/files/ENCFF229ZGH/@@download/ENCFF229ZGH.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF117DTC bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF602UAC, ENCFF650RFL 6584397 ENCODE Processing Pipeline 6fd2907c80ee14ec583c6b844473f4fc https://www.encodeproject.org/files/ENCFF117DTC/@@download/ENCFF117DTC.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF368NGK bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF387PPQ, ENCFF647LGE, ENCFF713KWF 5646841 ENCODE Processing Pipeline b58f5e76478991950ef4d8e8b5f0d8fd https://www.encodeproject.org/files/ENCFF368NGK/@@download/ENCFF368NGK.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF858ZAR bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF602UAC 5641637 ENCODE Processing Pipeline 15479ac58223db1458f5f3445066f9b8 https://www.encodeproject.org/files/ENCFF858ZAR/@@download/ENCFF858ZAR.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF223YTT bed narrowPeak conservative idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF368NGK, ENCFF585FBZ, ENCFF771WFB 1858 ENCODE Processing Pipeline 303b088828f1ffb96de7c7d845adcdc6 https://www.encodeproject.org/files/ENCFF223YTT/@@download/ENCFF223YTT.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF030QEM bed narrowPeak optimal idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF368NGK, ENCFF585FBZ, ENCFF771WFB 18193 ENCODE Processing Pipeline 14a3d6885148fb51f43bf238a190ef3c https://www.encodeproject.org/files/ENCFF030QEM/@@download/ENCFF030QEM.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF002VSM bed narrowPeak conservative idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF117DTC, ENCFF229ZGH, ENCFF419RSJ, ENCFF858ZAR 1091 ENCODE Processing Pipeline c6f18f3c7c85f19680cb89d4e58c2b17 https://www.encodeproject.org/files/ENCFF002VSM/@@download/ENCFF002VSM.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF868BIT bed narrowPeak optimal idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF117DTC, ENCFF229ZGH, ENCFF419RSJ, ENCFF858ZAR 15594 ENCODE Processing Pipeline 51debf39c5cf7bebc1d7e177410af26e https://www.encodeproject.org/files/ENCFF868BIT/@@download/ENCFF868BIT.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF470XSK bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF729JBY, ENCFF743HYF 6656025 ENCODE Processing Pipeline 60172433ce6edcbd05d4ded1bb9c513d https://www.encodeproject.org/files/ENCFF470XSK/@@download/ENCFF470XSK.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF783GCE bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF500XCK, ENCFF743HYF 6447846 ENCODE Processing Pipeline 7cb8cf2a71265a1596660d48d5838dec https://www.encodeproject.org/files/ENCFF783GCE/@@download/ENCFF783GCE.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF524YHM bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF500XCK, ENCFF729JBY, ENCFF743HYF 7097897 ENCODE Processing Pipeline a21018d8f50da75f19a06ee928071dfc https://www.encodeproject.org/files/ENCFF524YHM/@@download/ENCFF524YHM.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF171ODU bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF465ZZG, ENCFF604MCA 6518232 ENCODE Processing Pipeline 2dfb7b420ed4b9f47b9ce1c04ba11381 https://www.encodeproject.org/files/ENCFF171ODU/@@download/ENCFF171ODU.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF143EAJ bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF284MLL, ENCFF465ZZG, ENCFF604MCA 6967893 ENCODE Processing Pipeline 92ed1c21f494efc6d9f67a799a0c42c4 https://www.encodeproject.org/files/ENCFF143EAJ/@@download/ENCFF143EAJ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF909KSV bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF284MLL, ENCFF604MCA 6290134 ENCODE Processing Pipeline 9b52420f678325d956c2e4b63e78fb88 https://www.encodeproject.org/files/ENCFF909KSV/@@download/ENCFF909KSV.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF044TCD bed narrowPeak conservative idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF143EAJ, ENCFF171ODU, ENCFF419RSJ, ENCFF909KSV 387129 ENCODE Processing Pipeline 12446ecdc909e56ad6099521bcbd0bdc https://www.encodeproject.org/files/ENCFF044TCD/@@download/ENCFF044TCD.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF271NEP bed narrowPeak optimal idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF143EAJ, ENCFF171ODU, ENCFF419RSJ, ENCFF909KSV 389902 ENCODE Processing Pipeline 4ee33dbe140816bcee4908c36c73d3f5 https://www.encodeproject.org/files/ENCFF271NEP/@@download/ENCFF271NEP.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF602AXP bed narrowPeak optimal idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF470XSK, ENCFF524YHM, ENCFF783GCE 328275 ENCODE Processing Pipeline ad7eca2f92009aa774a2f0e1cc3ca6df https://www.encodeproject.org/files/ENCFF602AXP/@@download/ENCFF602AXP.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF433UZU bed narrowPeak conservative idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF470XSK, ENCFF524YHM, ENCFF783GCE 316519 ENCODE Processing Pipeline cffa04741a1c81b1f1a153eff47d066b https://www.encodeproject.org/files/ENCFF433UZU/@@download/ENCFF433UZU.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF237KXE bed narrowPeak peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 1 ENCFF196NQE 5891038 ENCODE Processing Pipeline 50f7b5e3af97911dc295897cfa2fc8b8 https://www.encodeproject.org/files/ENCFF237KXE/@@download/ENCFF237KXE.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF399IOW bed narrowPeak peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 1, 2 ENCFF196NQE, ENCFF326UWJ 6933761 ENCODE Processing Pipeline b18d4d8631dbd815df3fffacda7196ad https://www.encodeproject.org/files/ENCFF399IOW/@@download/ENCFF399IOW.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF590HSU bed narrowPeak peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 2 ENCFF326UWJ 5875504 ENCODE Processing Pipeline c6a2ae12e5315da4c5ca603d4b46223e https://www.encodeproject.org/files/ENCFF590HSU/@@download/ENCFF590HSU.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF215CSP bed narrowPeak conservative idr thresholded peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 1, 2 ENCFF237KXE, ENCFF399IOW, ENCFF419RSJ, ENCFF590HSU 82227 ENCODE Processing Pipeline 4b61b3e199cd54dae288ba449c102f0d https://www.encodeproject.org/files/ENCFF215CSP/@@download/ENCFF215CSP.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF985TIE bed narrowPeak optimal idr thresholded peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 1, 2 ENCFF237KXE, ENCFF399IOW, ENCFF419RSJ, ENCFF590HSU 123654 ENCODE Processing Pipeline e501581e867b37f38ba3d36cdd298cdc https://www.encodeproject.org/files/ENCFF985TIE/@@download/ENCFF985TIE.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF675GSO bed narrowPeak peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 1 ENCFF245PJA, ENCFF400QQF, ENCFF574XYY 5884954 ENCODE Processing Pipeline ba1cc78bc1ab36ea8b08d0d8f5fe30b7 https://www.encodeproject.org/files/ENCFF675GSO/@@download/ENCFF675GSO.bed.gz hg19 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF793NUP bed narrowPeak peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 2 ENCFF097KHH, ENCFF245PJA 5876055 ENCODE Processing Pipeline 234d806dc8adb14317f79b5583eded83 https://www.encodeproject.org/files/ENCFF793NUP/@@download/ENCFF793NUP.bed.gz hg19 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF405BIW bed narrowPeak peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 1, 2 ENCFF097KHH, ENCFF245PJA, ENCFF400QQF, ENCFF574XYY 6936101 ENCODE Processing Pipeline ff6c995c7d71e066affacbd1e129a281 https://www.encodeproject.org/files/ENCFF405BIW/@@download/ENCFF405BIW.bed.gz hg19 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF474OCG bed narrowPeak optimal idr thresholded peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF405BIW, ENCFF675GSO, ENCFF793NUP 126237 ENCODE Processing Pipeline a7c76d24905baca5a833970775793fce https://www.encodeproject.org/files/ENCFF474OCG/@@download/ENCFF474OCG.bed.gz hg19 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF120WZL bed narrowPeak conservative idr thresholded peaks ENCSR915SJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens WDR5-human ENCAB975FNJ DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF405BIW, ENCFF675GSO, ENCFF793NUP 83270 ENCODE Processing Pipeline 645383cca23a03a9b8a21c4180ab4a11 https://www.encodeproject.org/files/ENCFF120WZL/@@download/ENCFF120WZL.bed.gz hg19 released inconsistent platforms, borderline replicate concordance experiment not submitted to GEO antibody not characterized to standard ENCFF058DFD bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF523PEG, ENCFF773XAD, ENCFF918WMQ 6166034 ENCODE Processing Pipeline 76e0de8a5ea139b2ab650f2a5c6e81cb https://www.encodeproject.org/files/ENCFF058DFD/@@download/ENCFF058DFD.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF138XJT bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF523PEG, ENCFF773XAD 5167428 ENCODE Processing Pipeline 1a4fc262ff8b6b7d1b7a7af59ee3373f https://www.encodeproject.org/files/ENCFF138XJT/@@download/ENCFF138XJT.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF165PIM bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF773XAD, ENCFF918WMQ 5438648 ENCODE Processing Pipeline 45571ed9fb10e650d229fc35923273d2 https://www.encodeproject.org/files/ENCFF165PIM/@@download/ENCFF165PIM.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF576XRJ bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF979BFW 5012873 ENCODE Processing Pipeline 26f03483bb43207ce5e0c83e6c75bc74 https://www.encodeproject.org/files/ENCFF576XRJ/@@download/ENCFF576XRJ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF509LOB bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF102ZOS, ENCFF979BFW 5963583 ENCODE Processing Pipeline e19d9d7e5141004d4dabbe738bc7543e https://www.encodeproject.org/files/ENCFF509LOB/@@download/ENCFF509LOB.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF460FNJ bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF102ZOS 5229612 ENCODE Processing Pipeline 3c48e1373f45127091e14e9a8e34d41f https://www.encodeproject.org/files/ENCFF460FNJ/@@download/ENCFF460FNJ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF208VCB bed narrowPeak optimal idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF460FNJ, ENCFF509LOB, ENCFF576XRJ 313712 ENCODE Processing Pipeline c2113a6ba83d8fda7f552be4c72912be https://www.encodeproject.org/files/ENCFF208VCB/@@download/ENCFF208VCB.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF003GOA bed narrowPeak conservative idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF058DFD, ENCFF138XJT, ENCFF165PIM 266886 ENCODE Processing Pipeline 603d579136fb94a8a916673206def8bc https://www.encodeproject.org/files/ENCFF003GOA/@@download/ENCFF003GOA.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF417TXD bed narrowPeak optimal idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF058DFD, ENCFF138XJT, ENCFF165PIM 267307 ENCODE Processing Pipeline b55f438e6fa9a3b6ae13846dda2ca4b7 https://www.encodeproject.org/files/ENCFF417TXD/@@download/ENCFF417TXD.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF002CMX bed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 477726 ENCODE Consortium Analysis Working Group ad2e68ab363f735a8ae9c4144c611460 https://www.encodeproject.org/files/ENCFF002CMX/@@download/ENCFF002CMX.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF541WVG bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF567GMS, ENCFF913HVS 2421088 ENCODE Processing Pipeline 3bbca13cf836fd9b3061d2d9d000ff37 https://www.encodeproject.org/files/ENCFF541WVG/@@download/ENCFF541WVG.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF908XHK bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF067TWQ, ENCFF234NVU, ENCFF913HVS 5930295 ENCODE Processing Pipeline dce3876dc35ff66f9ce31a1e98a96d32 https://www.encodeproject.org/files/ENCFF908XHK/@@download/ENCFF908XHK.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF535FVE bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067TWQ, ENCFF234NVU, ENCFF567GMS, ENCFF913HVS 6003961 ENCODE Processing Pipeline 848e5667d4bfa1ea05c8b4392248d48a https://www.encodeproject.org/files/ENCFF535FVE/@@download/ENCFF535FVE.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF024TJO bed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF535FVE, ENCFF541WVG, ENCFF908XHK 507864 ENCODE Processing Pipeline 0dd0a3eb71a0ca45616c9c9568ab7bb5 https://www.encodeproject.org/files/ENCFF024TJO/@@download/ENCFF024TJO.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF938BND bed narrowPeak conservative idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF535FVE, ENCFF541WVG, ENCFF908XHK 134424 ENCODE Processing Pipeline 7305cbf694d07d141a50db874c165cce https://www.encodeproject.org/files/ENCFF938BND/@@download/ENCFF938BND.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF002CMK bed narrowPeak optimal idr thresholded peaks ENCSR000BKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 750678 ENCODE Consortium Analysis Working Group 2088844e8679b778990032cd82e725c4 https://www.encodeproject.org/files/ENCFF002CMK/@@download/ENCFF002CMK.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CMM bed narrowPeak optimal idr thresholded peaks ENCSR000BGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 94185 ENCODE Consortium Analysis Working Group 1f0494497f4bf36bc3b8cda4c0c37dde https://www.encodeproject.org/files/ENCFF002CMM/@@download/ENCFF002CMM.bed.gz hg19 released low read length missing derived_from, biological replicates with identical biosample ENCFF961ADP bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF181PST, ENCFF559EGU 7002170 ENCODE Processing Pipeline 6ece835dcbdf4828c1f339abadab621f https://www.encodeproject.org/files/ENCFF961ADP/@@download/ENCFF961ADP.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF857RCJ bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF181PST, ENCFF559EGU, ENCFF602FUW 7224900 ENCODE Processing Pipeline 54181619aa6c737d06304a79dfb147f5 https://www.encodeproject.org/files/ENCFF857RCJ/@@download/ENCFF857RCJ.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF814SES bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF181PST, ENCFF602FUW 6403721 ENCODE Processing Pipeline adcbd23aff63735c0557f15b852f6b3c https://www.encodeproject.org/files/ENCFF814SES/@@download/ENCFF814SES.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF473FJI bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF243UPF, ENCFF701KAF 6927190 ENCODE Processing Pipeline 65d00adfe73f5ddf5450c8937d913ec3 https://www.encodeproject.org/files/ENCFF473FJI/@@download/ENCFF473FJI.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF497BUE bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF243UPF, ENCFF922JWO 6263965 ENCODE Processing Pipeline bbfd8520e9d478f8c05d7c6a1e2ed665 https://www.encodeproject.org/files/ENCFF497BUE/@@download/ENCFF497BUE.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF367SQU bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF243UPF, ENCFF701KAF, ENCFF922JWO 7185007 ENCODE Processing Pipeline 4be035025e8e07a8a87e686bccb7e86d https://www.encodeproject.org/files/ENCFF367SQU/@@download/ENCFF367SQU.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF251ZSJ bed narrowPeak conservative idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF367SQU, ENCFF419RSJ, ENCFF473FJI, ENCFF497BUE 206360 ENCODE Processing Pipeline c919cc6810dc7324655e518b9f096c61 https://www.encodeproject.org/files/ENCFF251ZSJ/@@download/ENCFF251ZSJ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF203LRV bed narrowPeak optimal idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF367SQU, ENCFF419RSJ, ENCFF473FJI, ENCFF497BUE 326196 ENCODE Processing Pipeline 12b2738402bccb1e62af49e3ce0ed95d https://www.encodeproject.org/files/ENCFF203LRV/@@download/ENCFF203LRV.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF372XLP bed narrowPeak conservative idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF814SES, ENCFF857RCJ, ENCFF961ADP 176211 ENCODE Processing Pipeline ca85f4e90a52e224291c6f8884748547 https://www.encodeproject.org/files/ENCFF372XLP/@@download/ENCFF372XLP.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF388AJH bed narrowPeak optimal idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF814SES, ENCFF857RCJ, ENCFF961ADP 272085 ENCODE Processing Pipeline 84c15f8be1f7b09a51e64536e6a6dd11 https://www.encodeproject.org/files/ENCFF388AJH/@@download/ENCFF388AJH.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF290BUP bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF056XVW 5862231 ENCODE Processing Pipeline a1851aec8d208649a3b9f1729ac5be39 https://www.encodeproject.org/files/ENCFF290BUP/@@download/ENCFF290BUP.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF359CNE bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF540SXT 6153223 ENCODE Processing Pipeline d64d8d256acff1ce3d67ffd20f4997e8 https://www.encodeproject.org/files/ENCFF359CNE/@@download/ENCFF359CNE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF057EGU bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF056XVW, ENCFF540SXT 6545134 ENCODE Processing Pipeline 13d8b796d014fd1a1aafa5b03e5c2569 https://www.encodeproject.org/files/ENCFF057EGU/@@download/ENCFF057EGU.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF389KBV bed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF057EGU, ENCFF290BUP, ENCFF359CNE, ENCFF419RSJ 61908 ENCODE Processing Pipeline 6053ff17ee44221ef85259f47a011a74 https://www.encodeproject.org/files/ENCFF389KBV/@@download/ENCFF389KBV.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF532HCE bed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF057EGU, ENCFF290BUP, ENCFF359CNE, ENCFF419RSJ 65861 ENCODE Processing Pipeline 024805d8bbc803eb8d4a9e158fa30823 https://www.encodeproject.org/files/ENCFF532HCE/@@download/ENCFF532HCE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF774DGH bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF444TNY, ENCFF847YDJ, ENCFF875XTU 5923453 ENCODE Processing Pipeline 1c68465e3c10cf7ca801edb567c6a1c8 https://www.encodeproject.org/files/ENCFF774DGH/@@download/ENCFF774DGH.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF433RNR bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ 6188871 ENCODE Processing Pipeline 4f349162fa27939dac8a7fc617b685f9 https://www.encodeproject.org/files/ENCFF433RNR/@@download/ENCFF433RNR.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF671XXI bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ, ENCFF875XTU 6588901 ENCODE Processing Pipeline 0b32b352d9146441b84ad9468d59806b https://www.encodeproject.org/files/ENCFF671XXI/@@download/ENCFF671XXI.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF633OQQ bed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF433RNR, ENCFF671XXI, ENCFF774DGH 60284 ENCODE Processing Pipeline 04088c209c696a78154ec3e0025ffc50 https://www.encodeproject.org/files/ENCFF633OQQ/@@download/ENCFF633OQQ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF786WZD bed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF433RNR, ENCFF671XXI, ENCFF774DGH 64933 ENCODE Processing Pipeline 35a9ccfb765df1b979ffba0e21e27919 https://www.encodeproject.org/files/ENCFF786WZD/@@download/ENCFF786WZD.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF318ICI bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF066TDG 6594649 ENCODE Processing Pipeline c31f11d8abe3e70259e45c68f8f21361 https://www.encodeproject.org/files/ENCFF318ICI/@@download/ENCFF318ICI.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF665RFE bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF066TDG, ENCFF330ZVF 7084471 ENCODE Processing Pipeline a3878e2c9d342dd3cc2f8a67d233cf93 https://www.encodeproject.org/files/ENCFF665RFE/@@download/ENCFF665RFE.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF179HIK bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF330ZVF 5008917 ENCODE Processing Pipeline cf4d1f9904f6c62a0df213b1061f951b https://www.encodeproject.org/files/ENCFF179HIK/@@download/ENCFF179HIK.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF561ZCZ bed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF179HIK, ENCFF318ICI, ENCFF419RSJ, ENCFF665RFE 103633 ENCODE Processing Pipeline 132d8cec16663937ab3d080451cd2263 https://www.encodeproject.org/files/ENCFF561ZCZ/@@download/ENCFF561ZCZ.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF955AOD bed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF179HIK, ENCFF318ICI, ENCFF419RSJ, ENCFF665RFE 149529 ENCODE Processing Pipeline bc4c11d9d78b94563fe383ad4e73cabf https://www.encodeproject.org/files/ENCFF955AOD/@@download/ENCFF955AOD.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF653KSG bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF061QOJ, ENCFF697MUV 5013280 ENCODE Processing Pipeline 3b05dbf77ef7c94afb2756e092c442af https://www.encodeproject.org/files/ENCFF653KSG/@@download/ENCFF653KSG.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF274QRN bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF444TNY, ENCFF687NJZ 6619368 ENCODE Processing Pipeline 9623122622e543751f25f98e9569871c https://www.encodeproject.org/files/ENCFF274QRN/@@download/ENCFF274QRN.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF321EBZ bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF061QOJ, ENCFF444TNY, ENCFF687NJZ, ENCFF697MUV 7082793 ENCODE Processing Pipeline 38d601c00b062ea1c82507bfe9a3f98c https://www.encodeproject.org/files/ENCFF321EBZ/@@download/ENCFF321EBZ.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF042RAK bed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF274QRN, ENCFF321EBZ, ENCFF653KSG 143406 ENCODE Processing Pipeline 5999caca5c955d8fcf5642d2be510f69 https://www.encodeproject.org/files/ENCFF042RAK/@@download/ENCFF042RAK.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth mismatched status ENCFF053ADC bed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF274QRN, ENCFF321EBZ, ENCFF653KSG 99607 ENCODE Processing Pipeline 9679702e2cbe451a0251b3e344a98c49 https://www.encodeproject.org/files/ENCFF053ADC/@@download/ENCFF053ADC.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth mismatched status ENCFF002CES bed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 369147 ENCODE Consortium Analysis Working Group 86b81d77fa5dc25665ce55080ea5a16e https://www.encodeproject.org/files/ENCFF002CES/@@download/ENCFF002CES.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length missing derived_from insufficient replicate concordance ENCFF334EYE bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 1 ENCFF915BFX 6507653 ENCODE Processing Pipeline 17360aff5282fadbdaf170d7933f703b https://www.encodeproject.org/files/ENCFF334EYE/@@download/ENCFF334EYE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF296MZN bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF529ZVO, ENCFF915BFX 6759066 ENCODE Processing Pipeline b36f176dea912eace8aac61b36d59f08 https://www.encodeproject.org/files/ENCFF296MZN/@@download/ENCFF296MZN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF629JIS bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 1 ENCFF245PJA, ENCFF574XYY, ENCFF968GEX 6530562 ENCODE Processing Pipeline 5fddb2dafc4ceb20398de06505d31d68 https://www.encodeproject.org/files/ENCFF629JIS/@@download/ENCFF629JIS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF604PEX bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 2 ENCFF529ZVO 4452898 ENCODE Processing Pipeline 08cf1d7680eb25c63175fe4f0c702aef https://www.encodeproject.org/files/ENCFF604PEX/@@download/ENCFF604PEX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF573OMT bed narrowPeak conservative idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF296MZN, ENCFF334EYE, ENCFF419RSJ, ENCFF604PEX 6809 ENCODE Processing Pipeline fe02d957bdc075288e2b2fa3ac5d9aac https://www.encodeproject.org/files/ENCFF573OMT/@@download/ENCFF573OMT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF106WXI bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF508VRU 4459629 ENCODE Processing Pipeline 28a4597f2f0ebdeb3dba733477d56e22 https://www.encodeproject.org/files/ENCFF106WXI/@@download/ENCFF106WXI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF758VGA bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF245PJA, ENCFF508VRU, ENCFF574XYY, ENCFF968GEX 6798083 ENCODE Processing Pipeline 7e0ae144ef9fcd17e9e7f5ac2548024f https://www.encodeproject.org/files/ENCFF758VGA/@@download/ENCFF758VGA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF668XLN bed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF296MZN, ENCFF334EYE, ENCFF419RSJ, ENCFF604PEX 399306 ENCODE Processing Pipeline ca7272ef7a4efd32be3d3dd96504e87c https://www.encodeproject.org/files/ENCFF668XLN/@@download/ENCFF668XLN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF826CYV bed narrowPeak conservative idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF106WXI, ENCFF629JIS, ENCFF758VGA 5590 ENCODE Processing Pipeline 2c9aa433dd5ca7fe69d8f7b71a3f29da https://www.encodeproject.org/files/ENCFF826CYV/@@download/ENCFF826CYV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF368TYM bed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM5B-human ENCAB487VWD, ENCAB000AJZ DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF106WXI, ENCFF629JIS, ENCFF758VGA 411041 ENCODE Processing Pipeline 345d4603d143c43d2fd3a5937287c1f4 https://www.encodeproject.org/files/ENCFF368TYM/@@download/ENCFF368TYM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient replicate concordance ENCFF001VPC bed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 733885 Michael Snyder, Stanford 5f961cf9a4a338ac77890f2cbbd41b1c https://www.encodeproject.org/files/ENCFF001VPC/@@download/ENCFF001VPC.bed.gz hg19 released low read depth, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF002CYK bed narrowPeak optimal idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 452402 ENCODE Consortium Analysis Working Group 679423057e1c8b5be5b7229891b84cb2 https://www.encodeproject.org/files/ENCFF002CYK/@@download/ENCFF002CYK.bed.gz hg19 released low read depth, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF001VMV bed narrowPeak peaks ENCSR000FAG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 79114 Sherman Weissman, Yale 17c3632f80445408b56fef214358cd6a https://www.encodeproject.org/files/ENCFF001VMV/@@download/ENCFF001VMV.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CWI bed narrowPeak optimal idr thresholded peaks ENCSR000FAG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 100566 ENCODE Consortium Analysis Working Group dc7b2f11aa6ce545fdba1c08dc21c233 https://www.encodeproject.org/files/ENCFF002CWI/@@download/ENCFF002CWI.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF243AWG bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF591PYL, ENCFF748QNI 6702271 ENCODE Processing Pipeline 48e73ba4a2edbd11ad5617c5bae35faa https://www.encodeproject.org/files/ENCFF243AWG/@@download/ENCFF243AWG.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF258HYJ bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF591PYL, ENCFF632XPI 6525547 ENCODE Processing Pipeline 0707452f5158f3676955c29043b9816f https://www.encodeproject.org/files/ENCFF258HYJ/@@download/ENCFF258HYJ.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF802GJA bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF591PYL, ENCFF632XPI, ENCFF748QNI 7225697 ENCODE Processing Pipeline 28a2fed7e3d9e6ceb65d3ffa54860502 https://www.encodeproject.org/files/ENCFF802GJA/@@download/ENCFF802GJA.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF633PGJ bed narrowPeak conservative idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF243AWG, ENCFF258HYJ, ENCFF802GJA 422002 ENCODE Processing Pipeline 3975b1a4f948fb5c2ab2b04a7c98b18d https://www.encodeproject.org/files/ENCFF633PGJ/@@download/ENCFF633PGJ.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF320THV bed narrowPeak optimal idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF243AWG, ENCFF258HYJ, ENCFF802GJA 447479 ENCODE Processing Pipeline b709cb1dcaca3ca588904fc3e400b3da https://www.encodeproject.org/files/ENCFF320THV/@@download/ENCFF320THV.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF020YJO bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF096KBP 6701620 ENCODE Processing Pipeline 650241c9f9b2fb917d23fe39ea675840 https://www.encodeproject.org/files/ENCFF020YJO/@@download/ENCFF020YJO.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF212MIH bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF285CII 6504626 ENCODE Processing Pipeline c429c7b562c8c57b30735c490b57d17a https://www.encodeproject.org/files/ENCFF212MIH/@@download/ENCFF212MIH.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF141XEH bed narrowPeak conservative idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF020YJO, ENCFF212MIH, ENCFF419RSJ, ENCFF863QLQ 413747 ENCODE Processing Pipeline 2a39ea9a417129c5520dc913d26f942f https://www.encodeproject.org/files/ENCFF141XEH/@@download/ENCFF141XEH.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF863QLQ bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF096KBP, ENCFF285CII 7203273 ENCODE Processing Pipeline 87d454d48dee1b031ed4db893a839b83 https://www.encodeproject.org/files/ENCFF863QLQ/@@download/ENCFF863QLQ.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF431GJK bed narrowPeak optimal idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF020YJO, ENCFF212MIH, ENCFF419RSJ, ENCFF863QLQ 446273 ENCODE Processing Pipeline 07faf723ed3075a3081c4c8d9b173ccf https://www.encodeproject.org/files/ENCFF431GJK/@@download/ENCFF431GJK.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF981LHO bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF124STW, ENCFF860REV 5953388 ENCODE Processing Pipeline 20b265d3d51a939bbb83700dca54c959 https://www.encodeproject.org/files/ENCFF981LHO/@@download/ENCFF981LHO.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF351JUL bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF124STW, ENCFF400FDW, ENCFF860REV 6972262 ENCODE Processing Pipeline e0d0cbad321bdcda11cb355184863281 https://www.encodeproject.org/files/ENCFF351JUL/@@download/ENCFF351JUL.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF069PPO bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF124STW, ENCFF400FDW 6175393 ENCODE Processing Pipeline 6641e81b3eae2a5e024312e55a53bba0 https://www.encodeproject.org/files/ENCFF069PPO/@@download/ENCFF069PPO.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF235HIP bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF586KRI, ENCFF662KUU 6862390 ENCODE Processing Pipeline a58c3dfb906f93014f62c68595b938cc https://www.encodeproject.org/files/ENCFF235HIP/@@download/ENCFF235HIP.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF041ATK bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF586KRI 5806562 ENCODE Processing Pipeline e2b7ca1ee767ebdb89591f59e8053eca https://www.encodeproject.org/files/ENCFF041ATK/@@download/ENCFF041ATK.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF841XAB bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF662KUU 6016291 ENCODE Processing Pipeline 9cd3ff136e0f576a3ef7523933153408 https://www.encodeproject.org/files/ENCFF841XAB/@@download/ENCFF841XAB.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF803HUH bed narrowPeak conservative idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF041ATK, ENCFF235HIP, ENCFF419RSJ, ENCFF841XAB 79132 ENCODE Processing Pipeline b1d1973297dd68897052bef9c5f1efb3 https://www.encodeproject.org/files/ENCFF803HUH/@@download/ENCFF803HUH.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF587PBU bed narrowPeak optimal idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF041ATK, ENCFF235HIP, ENCFF419RSJ, ENCFF841XAB 87923 ENCODE Processing Pipeline 89af7748e051ca3be492460952e50e39 https://www.encodeproject.org/files/ENCFF587PBU/@@download/ENCFF587PBU.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF332DRG bed narrowPeak optimal idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF069PPO, ENCFF351JUL, ENCFF981LHO 86566 ENCODE Processing Pipeline 1e20dd325116baacb561791a59333622 https://www.encodeproject.org/files/ENCFF332DRG/@@download/ENCFF332DRG.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF320ZVD bed narrowPeak conservative idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF069PPO, ENCFF351JUL, ENCFF981LHO 65637 ENCODE Processing Pipeline d2a7ec45263ca5b3e3377e81acd82e71 https://www.encodeproject.org/files/ENCFF320ZVD/@@download/ENCFF320ZVD.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF001VRK bed narrowPeak peaks ENCSR000DJY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 729683 Kevin White, UChicago 171e5b65d57537390e9e55accafb9afb https://www.encodeproject.org/files/ENCFF001VRK/@@download/ENCFF001VRK.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, moderate library complexity, low read length missing derived_from insufficient read depth, severe bottlenecking ENCFF002DDY bed narrowPeak optimal idr thresholded peaks ENCSR000DJY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 273015 ENCODE Consortium Analysis Working Group d1ef04cbb500ad6a7e978a640b6e8b01 https://www.encodeproject.org/files/ENCFF002DDY/@@download/ENCFF002DDY.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, moderate library complexity, low read length missing derived_from insufficient read depth, severe bottlenecking ENCFF001VRJ bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 265852 Kevin White, UChicago 5f54a00f490be9bd92213e0295408d81 https://www.encodeproject.org/files/ENCFF001VRJ/@@download/ENCFF001VRJ.bed.gz hg19 archived low read depth, low read length missing derived_from insufficient replicate concordance ENCFF002DDX bed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 33793 ENCODE Consortium Analysis Working Group d1487abda2136e261aadb10bdf04addd https://www.encodeproject.org/files/ENCFF002DDX/@@download/ENCFF002DDX.bed.gz hg19 archived low read depth, low read length missing derived_from insufficient replicate concordance ENCFF835SWC bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF138FPL, ENCFF647LGE, ENCFF721IXJ 6392683 ENCODE Processing Pipeline 948b5e041781adbef373741551e875b4 https://www.encodeproject.org/files/ENCFF835SWC/@@download/ENCFF835SWC.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF547GIJ bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF138FPL, ENCFF647LGE, ENCFF721IXJ, ENCFF788FFM 6842772 ENCODE Processing Pipeline 5c86883bebbe6179bba9231e24255344 https://www.encodeproject.org/files/ENCFF547GIJ/@@download/ENCFF547GIJ.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF621HTW bed narrowPeak conservative idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF011ZRR, ENCFF547GIJ, ENCFF835SWC 21221 ENCODE Processing Pipeline 51ef0f0a5a46ed44d6ff2a5e81830b7b https://www.encodeproject.org/files/ENCFF621HTW/@@download/ENCFF621HTW.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF176GTK bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF786TLS 6372481 ENCODE Processing Pipeline 861980e081373c051615c12d91821be1 https://www.encodeproject.org/files/ENCFF176GTK/@@download/ENCFF176GTK.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF833KXP bed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF011ZRR, ENCFF547GIJ, ENCFF835SWC 43873 ENCODE Processing Pipeline 215555097926bb12b0154429fa63d0fe https://www.encodeproject.org/files/ENCFF833KXP/@@download/ENCFF833KXP.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF011ZRR bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF138FPL, ENCFF647LGE, ENCFF788FFM 4681633 ENCODE Processing Pipeline a4f8c8552ac239cf18baaac502d0326c https://www.encodeproject.org/files/ENCFF011ZRR/@@download/ENCFF011ZRR.bed.gz hg19 released low read depth, low read length insufficient replicate concordance ENCFF595XOF bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF659KOL 4837884 ENCODE Processing Pipeline 7bc553fc169b919941ea629d8f826df6 https://www.encodeproject.org/files/ENCFF595XOF/@@download/ENCFF595XOF.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF887IVP bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF659KOL, ENCFF786TLS 6826226 ENCODE Processing Pipeline 135c2ec57ad4f6e5f65f8ae25175bc32 https://www.encodeproject.org/files/ENCFF887IVP/@@download/ENCFF887IVP.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF237RPL bed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF176GTK, ENCFF419RSJ, ENCFF595XOF, ENCFF887IVP 42093 ENCODE Processing Pipeline 58b0a8c7747dd8173a3b0aa870073ea6 https://www.encodeproject.org/files/ENCFF237RPL/@@download/ENCFF237RPL.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF631RMQ bed narrowPeak conservative idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF176GTK, ENCFF419RSJ, ENCFF595XOF, ENCFF887IVP 18980 ENCODE Processing Pipeline e4987686f399d91c918e1ec133168a0b https://www.encodeproject.org/files/ENCFF631RMQ/@@download/ENCFF631RMQ.bed.gz GRCh38 released low read depth, low read length insufficient replicate concordance ENCFF001VOH bed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 112755 Michael Snyder, Stanford e878710ad764502ef990eeff2524a04a https://www.encodeproject.org/files/ENCFF001VOH/@@download/ENCFF001VOH.bed.gz hg19 released missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CXQ bed narrowPeak optimal idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 201419 ENCODE Consortium Analysis Working Group 084ad0406460e0147c0920c7d6ee0855 https://www.encodeproject.org/files/ENCFF002CXQ/@@download/ENCFF002CXQ.bed.gz hg19 released missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF001UTE bed narrowPeak peaks ENCSR000DMA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 1504839 Vishwanath Iyer, UTA 984abaf5e5a6fa22237906bc107644ac https://www.encodeproject.org/files/ENCFF001UTE/@@download/ENCFF001UTE.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002DBD bed narrowPeak optimal idr thresholded peaks ENCSR000DMA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 1077102 ENCODE Consortium Analysis Working Group 691e48b1344e23067ee35e35c640d364 https://www.encodeproject.org/files/ENCFF002DBD/@@download/ENCFF002DBD.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF772XDS bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF220WDD, ENCFF736LGI 6670751 ENCODE Processing Pipeline b7b315993188bf1abc678d70b38144eb https://www.encodeproject.org/files/ENCFF772XDS/@@download/ENCFF772XDS.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF469YOH bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF736LGI, ENCFF812HBY 7059386 ENCODE Processing Pipeline f50f1f3780c9198b3c3454752863a295 https://www.encodeproject.org/files/ENCFF469YOH/@@download/ENCFF469YOH.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF820FCA bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF220WDD, ENCFF736LGI, ENCFF812HBY 7235484 ENCODE Processing Pipeline b9c2f1c3f5bbf0b61f08bfc1745bb904 https://www.encodeproject.org/files/ENCFF820FCA/@@download/ENCFF820FCA.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF356MDE bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF221XVM 6495494 ENCODE Processing Pipeline 62ecdfedf414fcc71f91a2d32fd24d50 https://www.encodeproject.org/files/ENCFF356MDE/@@download/ENCFF356MDE.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF443POG bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF042SJF, ENCFF221XVM 7172438 ENCODE Processing Pipeline 19fc6c3b735fb09b051f9e053458a806 https://www.encodeproject.org/files/ENCFF443POG/@@download/ENCFF443POG.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF795UBE bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF042SJF 6964069 ENCODE Processing Pipeline 0cf18f474a866ebeabed10e75457c7aa https://www.encodeproject.org/files/ENCFF795UBE/@@download/ENCFF795UBE.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF752RBV bed narrowPeak conservative idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF356MDE, ENCFF419RSJ, ENCFF443POG, ENCFF795UBE 234782 ENCODE Processing Pipeline c187c9c6b62752e9ebf7303126535376 https://www.encodeproject.org/files/ENCFF752RBV/@@download/ENCFF752RBV.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF365WQR bed narrowPeak optimal idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF356MDE, ENCFF419RSJ, ENCFF443POG, ENCFF795UBE 308624 ENCODE Processing Pipeline 7f044fedfd3ee72ba2de5399f6421de2 https://www.encodeproject.org/files/ENCFF365WQR/@@download/ENCFF365WQR.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF319BCP bed narrowPeak optimal idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF469YOH, ENCFF772XDS, ENCFF820FCA 249611 ENCODE Processing Pipeline 1a3945bf43921b404e8afa5fea99ca48 https://www.encodeproject.org/files/ENCFF319BCP/@@download/ENCFF319BCP.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF476YGX bed narrowPeak conservative idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF469YOH, ENCFF772XDS, ENCFF820FCA 190668 ENCODE Processing Pipeline 10cf300bc70b86079fd310bbd0d61d6b https://www.encodeproject.org/files/ENCFF476YGX/@@download/ENCFF476YGX.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF293JHO bed narrowPeak peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 1 ENCFF668VFP 5187866 ENCODE Processing Pipeline 9c2adf7060cfa3e3c7aafaefc29283e3 https://www.encodeproject.org/files/ENCFF293JHO/@@download/ENCFF293JHO.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF630VPK bed narrowPeak peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 1, 2 ENCFF157HDL, ENCFF668VFP 6052079 ENCODE Processing Pipeline e9201b61df332279789603ad258a21cf https://www.encodeproject.org/files/ENCFF630VPK/@@download/ENCFF630VPK.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF988SHT bed narrowPeak peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 2 ENCFF157HDL 3714336 ENCODE Processing Pipeline fe59524fc5faf0a1d6573e8923438490 https://www.encodeproject.org/files/ENCFF988SHT/@@download/ENCFF988SHT.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF540DIG bed narrowPeak conservative idr thresholded peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 1, 2 ENCFF293JHO, ENCFF419RSJ, ENCFF630VPK, ENCFF988SHT 12382 ENCODE Processing Pipeline 1f1d1fafba6dbcdc173420b051f70a3e https://www.encodeproject.org/files/ENCFF540DIG/@@download/ENCFF540DIG.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF779XNE bed narrowPeak optimal idr thresholded peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 1, 2 ENCFF293JHO, ENCFF419RSJ, ENCFF630VPK, ENCFF988SHT 21725 ENCODE Processing Pipeline 1bed88a742af0a5288edd13a25d30148 https://www.encodeproject.org/files/ENCFF779XNE/@@download/ENCFF779XNE.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF415UTU bed narrowPeak peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 2 ENCFF057IQO, ENCFF245PJA 3960764 ENCODE Processing Pipeline 1ec46040a9711e29f9754887497556e2 https://www.encodeproject.org/files/ENCFF415UTU/@@download/ENCFF415UTU.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF433HPA bed narrowPeak peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 1 ENCFF058VJB, ENCFF245PJA, ENCFF574XYY 5216449 ENCODE Processing Pipeline d0ae60ae614dbb9aae6999b3d37a60eb https://www.encodeproject.org/files/ENCFF433HPA/@@download/ENCFF433HPA.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF550KZE bed narrowPeak peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 1, 2 ENCFF057IQO, ENCFF058VJB, ENCFF245PJA, ENCFF574XYY 6044899 ENCODE Processing Pipeline 2d5a1aacc49be424b701006bcce74aa7 https://www.encodeproject.org/files/ENCFF550KZE/@@download/ENCFF550KZE.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF310MFF bed narrowPeak conservative idr thresholded peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 1, 2 ENCFF001TDO, ENCFF415UTU, ENCFF433HPA, ENCFF550KZE 13165 ENCODE Processing Pipeline f782f5d695a937386e26cdb18bb10959 https://www.encodeproject.org/files/ENCFF310MFF/@@download/ENCFF310MFF.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF309WAZ bed narrowPeak optimal idr thresholded peaks ENCSR530IUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RING1-human ENCAB608SSK, ENCAB582KNL DNA False 2017-01-08 ENCODE 1, 2 ENCFF001TDO, ENCFF415UTU, ENCFF433HPA, ENCFF550KZE 22637 ENCODE Processing Pipeline d42207eec2d698b3014d35ba29c459ab https://www.encodeproject.org/files/ENCFF309WAZ/@@download/ENCFF309WAZ.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, mixed read lengths, low read length, low read depth experiment not submitted to GEO uncharacterized antibody, partially characterized antibody ENCFF796QIY bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF523XHJ, ENCFF658DNV 7178952 ENCODE Processing Pipeline 5947fc9058236a998e643417ae7835fb https://www.encodeproject.org/files/ENCFF796QIY/@@download/ENCFF796QIY.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF915SSM bed narrowPeak conservative idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF124LKA, ENCFF490ZQW, ENCFF796QIY 103537 ENCODE Processing Pipeline 4ef498e594f6dfcbb27bf3a6499dee0c https://www.encodeproject.org/files/ENCFF915SSM/@@download/ENCFF915SSM.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF490ZQW bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF357MEA, ENCFF523XHJ 7019384 ENCODE Processing Pipeline e0167fabd2b873b50d51fa3aec537cf9 https://www.encodeproject.org/files/ENCFF490ZQW/@@download/ENCFF490ZQW.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF124LKA bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF357MEA, ENCFF523XHJ, ENCFF658DNV 7356838 ENCODE Processing Pipeline a17bdc450ae440e43075d17008430cd6 https://www.encodeproject.org/files/ENCFF124LKA/@@download/ENCFF124LKA.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF167HYX bed narrowPeak optimal idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF124LKA, ENCFF490ZQW, ENCFF796QIY 121570 ENCODE Processing Pipeline 38fe13495b413cb9d70bd0c99f9cfa0d https://www.encodeproject.org/files/ENCFF167HYX/@@download/ENCFF167HYX.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF004ADR bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF438XEX, ENCFF458FYW 7148858 ENCODE Processing Pipeline 6eff4c10b75728f02b9208ac8574bacf https://www.encodeproject.org/files/ENCFF004ADR/@@download/ENCFF004ADR.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF095RMB bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF458FYW, ENCFF709ZMI 6937957 ENCODE Processing Pipeline 4b7ce55c3c11c3a73d4d26bfa26181d6 https://www.encodeproject.org/files/ENCFF095RMB/@@download/ENCFF095RMB.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF839QEL bed narrowPeak optimal idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF004ADR, ENCFF095RMB, ENCFF121FFD, ENCFF419RSJ 126672 ENCODE Processing Pipeline 59818792fa40c2c3892123fb99218bb0 https://www.encodeproject.org/files/ENCFF839QEL/@@download/ENCFF839QEL.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF121FFD bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF438XEX, ENCFF458FYW, ENCFF709ZMI 7364037 ENCODE Processing Pipeline b1e72cc7840066f6441c7cb55462b458 https://www.encodeproject.org/files/ENCFF121FFD/@@download/ENCFF121FFD.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF950VDB bed narrowPeak conservative idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF004ADR, ENCFF095RMB, ENCFF121FFD, ENCFF419RSJ 105202 ENCODE Processing Pipeline 6dffb6d717979e9bb91ec8730d0aa948 https://www.encodeproject.org/files/ENCFF950VDB/@@download/ENCFF950VDB.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF692UXG bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF983RUX 5096786 ENCODE Processing Pipeline f99d7704310b119804fde0f9e66e8957 https://www.encodeproject.org/files/ENCFF692UXG/@@download/ENCFF692UXG.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF933RQE bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF677BBS 5145493 ENCODE Processing Pipeline 11a191ad1719dfa3fd71f2ae995cf63c https://www.encodeproject.org/files/ENCFF933RQE/@@download/ENCFF933RQE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF775JQN bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF677BBS, ENCFF983RUX 6525116 ENCODE Processing Pipeline 319a5a7cf20096c69ee770664e2d48b4 https://www.encodeproject.org/files/ENCFF775JQN/@@download/ENCFF775JQN.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF830UEH bed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF692UXG, ENCFF775JQN, ENCFF933RQE 120652 ENCODE Processing Pipeline fa200eedc4e96c25daeacf1ebc412940 https://www.encodeproject.org/files/ENCFF830UEH/@@download/ENCFF830UEH.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF071NYD bed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF692UXG, ENCFF775JQN, ENCFF933RQE 138537 ENCODE Processing Pipeline 529e27cb03d15bfeee667ecbcfc0a4bf https://www.encodeproject.org/files/ENCFF071NYD/@@download/ENCFF071NYD.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF616LVN bed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF175RNO, ENCFF373SQY, ENCFF472YHR 130606 ENCODE Processing Pipeline b10e96e443b6ef583669219f71f72a11 https://www.encodeproject.org/files/ENCFF616LVN/@@download/ENCFF616LVN.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF175RNO bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF012IGR, ENCFF061QOJ, ENCFF527GGD, ENCFF578ISP 6524209 ENCODE Processing Pipeline b006770fcaf5952edc18c06c66e6941d https://www.encodeproject.org/files/ENCFF175RNO/@@download/ENCFF175RNO.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF472YHR bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF527GGD 5360673 ENCODE Processing Pipeline 3eef564b1fbc3ea5f95219df16d69765 https://www.encodeproject.org/files/ENCFF472YHR/@@download/ENCFF472YHR.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF373SQY bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF012IGR, ENCFF578ISP 5147423 ENCODE Processing Pipeline 73a37eb0fe3c63684da32b63ebfb2efc https://www.encodeproject.org/files/ENCFF373SQY/@@download/ENCFF373SQY.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF522LWR bed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF175RNO, ENCFF373SQY, ENCFF472YHR 116149 ENCODE Processing Pipeline 834438d958584db57bb090e19d02c420 https://www.encodeproject.org/files/ENCFF522LWR/@@download/ENCFF522LWR.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF710KBI bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF099DHX, ENCFF807NZJ 6603746 ENCODE Processing Pipeline 5c96a10199f866ef8d8ff81060efc315 https://www.encodeproject.org/files/ENCFF710KBI/@@download/ENCFF710KBI.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF670KBE bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF099DHX, ENCFF767NHP 6408804 ENCODE Processing Pipeline e30b7c45b6616618875246c074065c8f https://www.encodeproject.org/files/ENCFF670KBE/@@download/ENCFF670KBE.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF694BDZ bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF099DHX, ENCFF767NHP, ENCFF807NZJ 7101195 ENCODE Processing Pipeline af90e22bf4cff8c3624eb3d60fcd0789 https://www.encodeproject.org/files/ENCFF694BDZ/@@download/ENCFF694BDZ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF789XDM bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF396AXY 6251232 ENCODE Processing Pipeline 844ca49edf86a942363064a8918b134c https://www.encodeproject.org/files/ENCFF789XDM/@@download/ENCFF789XDM.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF189PHJ bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF391BBO 6474392 ENCODE Processing Pipeline 55d7ce51df381dd813b7132ca6656014 https://www.encodeproject.org/files/ENCFF189PHJ/@@download/ENCFF189PHJ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF065BOS bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF391BBO, ENCFF396AXY 7049991 ENCODE Processing Pipeline b76ace1ce3215e700684ab44cf688214 https://www.encodeproject.org/files/ENCFF065BOS/@@download/ENCFF065BOS.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF400JHH bed narrowPeak conservative idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF065BOS, ENCFF189PHJ, ENCFF419RSJ, ENCFF789XDM 237619 ENCODE Processing Pipeline 45fedfcfc2106230520282d0e6dc2808 https://www.encodeproject.org/files/ENCFF400JHH/@@download/ENCFF400JHH.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF205IFX bed narrowPeak optimal idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF065BOS, ENCFF189PHJ, ENCFF419RSJ, ENCFF789XDM 266097 ENCODE Processing Pipeline 6fd62fd2b04c80cb9fbed279e5b2a0a1 https://www.encodeproject.org/files/ENCFF205IFX/@@download/ENCFF205IFX.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF048DTR bed narrowPeak conservative idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF670KBE, ENCFF694BDZ, ENCFF710KBI 196845 ENCODE Processing Pipeline 0f056a0878f013af157453cb04729afc https://www.encodeproject.org/files/ENCFF048DTR/@@download/ENCFF048DTR.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF545DAF bed narrowPeak optimal idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF670KBE, ENCFF694BDZ, ENCFF710KBI 243151 ENCODE Processing Pipeline 2d74e845180c2708a1b8a2f4ba901591 https://www.encodeproject.org/files/ENCFF545DAF/@@download/ENCFF545DAF.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF001UWR bed narrowPeak peaks ENCSR000EKN DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens vorinostat DNA see document see document False 2012-08-28 ENCODE 2080992 Gregory Crawford, Duke 9940212e3156352f57a76d874e63f268 https://www.encodeproject.org/files/ENCFF001UWR/@@download/ENCFF001UWR.bed.gz hg19 released missing derived_from, biological replicates with identical biosample ENCFF001VLY bed narrowPeak peaks ENCSR000DOG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 15999 Kevin Struhl, HMS bb4b58423b77a01e4bde05290e5f507b https://www.encodeproject.org/files/ENCFF001VLY/@@download/ENCFF001VLY.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CVN bed narrowPeak optimal idr thresholded peaks ENCSR000DOG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 30756 ENCODE Consortium Analysis Working Group f96359d316397bebb076f46153d104bf https://www.encodeproject.org/files/ENCFF002CVN/@@download/ENCFF002CVN.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001VNW bed narrowPeak peaks ENCSR000DOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NELFE-human ENCAB000AIZ DNA see document see document False 2011-10-29 ENCODE 7740 Kevin Struhl, HMS bf7be507971c91dea6fd109f2c7b895e https://www.encodeproject.org/files/ENCFF001VNW/@@download/ENCFF001VNW.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CXG bed narrowPeak optimal idr thresholded peaks ENCSR000DOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NELFE-human ENCAB000AIZ DNA see document see document False 2011-10-29 ENCODE 12288 ENCODE Consortium Analysis Working Group 04c642582e8fd9e37bbf42c38b05c517 https://www.encodeproject.org/files/ENCFF002CXG/@@download/ENCFF002CXG.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001UWQ bed narrowPeak peaks ENCSR000EKS DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNA see document see document False 2011-04-19 ENCODE 1971964 Gregory Crawford, Duke 967fa97156ca5b756800fa14bd9db61f https://www.encodeproject.org/files/ENCFF001UWQ/@@download/ENCFF001UWQ.bed.gz hg19 archived mixed read lengths, low spot score missing derived_from, mismatched file status, biological replicates with identical biosample insufficient spot score extremely low spot score ENCFF002CEP bed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 28146 ENCODE Consortium Analysis Working Group 13bd20b1e3ab003e3db4cdced8b95873 https://www.encodeproject.org/files/ENCFF002CEP/@@download/ENCFF002CEP.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth missing derived_from insufficient read depth ENCFF057OAB bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF428XVO 4204873 ENCODE Processing Pipeline 328d3274d279df5305dcd31d96932272 https://www.encodeproject.org/files/ENCFF057OAB/@@download/ENCFF057OAB.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF322OPC bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF245PJA, ENCFF422HPM, ENCFF574XYY 4336218 ENCODE Processing Pipeline 3580d942b4d0b3d698399cc018084638 https://www.encodeproject.org/files/ENCFF322OPC/@@download/ENCFF322OPC.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF480PEW bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF213CZL, ENCFF428XVO 4977114 ENCODE Processing Pipeline 468e6e58a1c6c4a673f101c50770ff1f https://www.encodeproject.org/files/ENCFF480PEW/@@download/ENCFF480PEW.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF996VOF bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF245PJA, ENCFF392VDD 3689177 ENCODE Processing Pipeline c9dd6ff51d059e1f979716b9efb805d9 https://www.encodeproject.org/files/ENCFF996VOF/@@download/ENCFF996VOF.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF676RZD bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF245PJA, ENCFF392VDD, ENCFF422HPM, ENCFF574XYY 5073702 ENCODE Processing Pipeline 2d696324ca493f3e066ce7f4a9dc1cce https://www.encodeproject.org/files/ENCFF676RZD/@@download/ENCFF676RZD.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF025HHM bed narrowPeak conservative idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF001TDO, ENCFF322OPC, ENCFF676RZD, ENCFF996VOF 18045 ENCODE Processing Pipeline aa6d067088248069a5b0d3aad3cc622f https://www.encodeproject.org/files/ENCFF025HHM/@@download/ENCFF025HHM.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF998HOR bed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF001TDO, ENCFF322OPC, ENCFF676RZD, ENCFF996VOF 33412 ENCODE Processing Pipeline 7ae9a8cbf62137818bd83b824a2f16a5 https://www.encodeproject.org/files/ENCFF998HOR/@@download/ENCFF998HOR.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF178MEM bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF213CZL 3567059 ENCODE Processing Pipeline c0c61074ac70a3165051c4dce66b19a7 https://www.encodeproject.org/files/ENCFF178MEM/@@download/ENCFF178MEM.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF669QKC bed narrowPeak conservative idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF057OAB, ENCFF178MEM, ENCFF419RSJ, ENCFF480PEW 14214 ENCODE Processing Pipeline 1dcb8ef3234c911a9a0ed3f04ba67ecd https://www.encodeproject.org/files/ENCFF669QKC/@@download/ENCFF669QKC.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF295GBP bed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF057OAB, ENCFF178MEM, ENCFF419RSJ, ENCFF480PEW 28789 ENCODE Processing Pipeline 68bf42e1127e4d21380226156afcb00f https://www.encodeproject.org/files/ENCFF295GBP/@@download/ENCFF295GBP.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth insufficient read depth ENCFF436VLT bed narrowPeak conservative idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF001TDO, ENCFF259GGN, ENCFF878IXX, ENCFF899WHU 39259 ENCODE Processing Pipeline 4cac43825aa66c90ee229715ebdbb477 https://www.encodeproject.org/files/ENCFF436VLT/@@download/ENCFF436VLT.bed.gz hg19 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF878IXX bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF210NXE, ENCFF245PJA, ENCFF574XYY, ENCFF965GBZ 6756256 ENCODE Processing Pipeline 182bfa3c5923a78514852b50e1040aee https://www.encodeproject.org/files/ENCFF878IXX/@@download/ENCFF878IXX.bed.gz hg19 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF244SSS bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF781JEI 3137209 ENCODE Processing Pipeline ec1abde3487aeb144cb9f40e632ab538 https://www.encodeproject.org/files/ENCFF244SSS/@@download/ENCFF244SSS.bed.gz GRCh38 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF210GJE bed narrowPeak optimal idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF064CHN, ENCFF244SSS, ENCFF391THL, ENCFF419RSJ 84014 ENCODE Processing Pipeline deffa54571fba63b8dcf1a3a04b6298a https://www.encodeproject.org/files/ENCFF210GJE/@@download/ENCFF210GJE.bed.gz GRCh38 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF899WHU bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF210NXE, ENCFF574XYY 3175361 ENCODE Processing Pipeline de97e63da95381464b0585cfcc301a51 https://www.encodeproject.org/files/ENCFF899WHU/@@download/ENCFF899WHU.bed.gz hg19 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF259GGN bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF245PJA, ENCFF574XYY, ENCFF965GBZ 5985541 ENCODE Processing Pipeline 7c06ada8c4afcca9a87c7d40ad8e052e https://www.encodeproject.org/files/ENCFF259GGN/@@download/ENCFF259GGN.bed.gz hg19 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF064CHN bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF954PRL 5969961 ENCODE Processing Pipeline 213c1e8d6651e22f120d6ed955c885ef https://www.encodeproject.org/files/ENCFF064CHN/@@download/ENCFF064CHN.bed.gz GRCh38 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF391THL bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF781JEI, ENCFF954PRL 6746202 ENCODE Processing Pipeline bd8f3b183fae9c685e64bb4e29dffda8 https://www.encodeproject.org/files/ENCFF391THL/@@download/ENCFF391THL.bed.gz GRCh38 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF346SWX bed narrowPeak conservative idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF064CHN, ENCFF244SSS, ENCFF391THL, ENCFF419RSJ 39126 ENCODE Processing Pipeline a6e815cdcf02c454ed4263080cde6af6 https://www.encodeproject.org/files/ENCFF346SWX/@@download/ENCFF346SWX.bed.gz GRCh38 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF456PQY bed narrowPeak optimal idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF001TDO, ENCFF259GGN, ENCFF878IXX, ENCFF899WHU 84138 ENCODE Processing Pipeline fd9253bc90bc6d93040317f11af2b98a https://www.encodeproject.org/files/ENCFF456PQY/@@download/ENCFF456PQY.bed.gz hg19 released low read depth, mixed run types, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking mismatched status insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF001VMP bed narrowPeak peaks ENCSR000FAH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 146616 Sherman Weissman, Yale 7ed01cd027c0414c49da3f4df1c41fe1 https://www.encodeproject.org/files/ENCFF001VMP/@@download/ENCFF001VMP.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CWC bed narrowPeak optimal idr thresholded peaks ENCSR000FAH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 192247 ENCODE Consortium Analysis Working Group abdba0bac5cb6444fefa32850edddc63 https://www.encodeproject.org/files/ENCFF002CWC/@@download/ENCFF002CWC.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CEU bed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 316070 ENCODE Consortium Analysis Working Group 281c4ee8e2b9fc087b8c64b15fb8dcd9 https://www.encodeproject.org/files/ENCFF002CEU/@@download/ENCFF002CEU.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF528ISK bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF178KOP, ENCFF574XYY 4417958 ENCODE Processing Pipeline d3f7cca88a9ed3ff600d59ee4106d0fb https://www.encodeproject.org/files/ENCFF528ISK/@@download/ENCFF528ISK.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF058DJL bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF574XYY, ENCFF707DNG 6863158 ENCODE Processing Pipeline ee81955a8585a9d1a942965e8afb2823 https://www.encodeproject.org/files/ENCFF058DJL/@@download/ENCFF058DJL.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF617FLM bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF178KOP, ENCFF245PJA, ENCFF574XYY, ENCFF707DNG 6978811 ENCODE Processing Pipeline 0d12bdaa6e35e22c278b4ced9e8d450c https://www.encodeproject.org/files/ENCFF617FLM/@@download/ENCFF617FLM.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF483WSN bed narrowPeak conservative idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF058DJL, ENCFF528ISK, ENCFF617FLM 309086 ENCODE Processing Pipeline 531d2d33a60a8d8192e30780325724f1 https://www.encodeproject.org/files/ENCFF483WSN/@@download/ENCFF483WSN.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF379MPS bed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF058DJL, ENCFF528ISK, ENCFF617FLM 443533 ENCODE Processing Pipeline afdb5fc3b65ee21fff5b7c97fe28142f https://www.encodeproject.org/files/ENCFF379MPS/@@download/ENCFF379MPS.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF805AOR bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF550DDF 6843301 ENCODE Processing Pipeline 948ca6b287b4b9c17d5cdbe00ef0cfb1 https://www.encodeproject.org/files/ENCFF805AOR/@@download/ENCFF805AOR.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF899YUP bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF713RXC 4215327 ENCODE Processing Pipeline 91c2f7ceb852450b1d9a162f5175d57c https://www.encodeproject.org/files/ENCFF899YUP/@@download/ENCFF899YUP.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF666PCE bed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF419RSJ, ENCFF805AOR, ENCFF899YUP, ENCFF941HWG 444907 ENCODE Processing Pipeline 32519d91cf9265db07609fd8a27284a6 https://www.encodeproject.org/files/ENCFF666PCE/@@download/ENCFF666PCE.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF941HWG bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF550DDF, ENCFF713RXC 6980764 ENCODE Processing Pipeline 1ede3aef6419bc71acfe3c3819cf0121 https://www.encodeproject.org/files/ENCFF941HWG/@@download/ENCFF941HWG.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF930OMM bed narrowPeak conservative idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF419RSJ, ENCFF805AOR, ENCFF899YUP, ENCFF941HWG 308367 ENCODE Processing Pipeline 7b1312155dffd40473bd76b65e3c05df https://www.encodeproject.org/files/ENCFF930OMM/@@download/ENCFF930OMM.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF001VOK bed narrowPeak peaks ENCSR000EHF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 1227266 Michael Snyder, Stanford 3dce75d663db7e3d0db775c02bba0fd2 https://www.encodeproject.org/files/ENCFF001VOK/@@download/ENCFF001VOK.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002DDU bed narrowPeak optimal idr thresholded peaks ENCSR000EHF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 44670 ENCODE Consortium Analysis Working Group b080f173f628f221e5b9d573a1a10fe3 https://www.encodeproject.org/files/ENCFF002DDU/@@download/ENCFF002DDU.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001XGV bed narrowPeak peaks ENCSR000DWD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ARB DNA see document see document False 2011-02-11 ENCODE 1 ENCFF001FWO 710142 John Stamatoyannopoulos, UW a33537cc1834d1d15c4f0c1eefd13ec3 https://www.encodeproject.org/files/ENCFF001XGV/@@download/ENCFF001XGV.bed.gz hg19 archived low read depth, low read length ENCFF001XGW bed narrowPeak peaks ENCSR000DWD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ARB DNA see document see document False 2011-02-11 ENCODE 2 ENCFF001FWT 709654 John Stamatoyannopoulos, UW 576dbb558e807a6511feff478d4ba3f9 https://www.encodeproject.org/files/ENCFF001XGW/@@download/ENCFF001XGW.bed.gz hg19 archived low read depth, low read length ENCFF709WNV bed narrowPeak peaks ENCSR000DWD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ARB DNA see document see document False 2011-02-11 ENCODE 1 ENCFF185YRK, ENCFF873PSH 689243 ENCODE Processing Pipeline 7e45c13152c9902be6fe06082aae249a https://www.encodeproject.org/files/ENCFF709WNV/@@download/ENCFF709WNV.bed.gz GRCh38 released low read depth, low read length ENCFF537XMF bed narrowPeak peaks ENCSR000DWD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ARB DNA see document see document False 2011-02-11 ENCODE 1, 2 ENCFF185YRK, ENCFF873PSH, ENCFF955AMI 619819 ENCODE Processing Pipeline c0faa52d3b6c0604c6c6a69ee1468a47 https://www.encodeproject.org/files/ENCFF537XMF/@@download/ENCFF537XMF.bed.gz GRCh38 released low read depth, low read length ENCFF862MSZ bed narrowPeak peaks ENCSR000DWD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ARB DNA see document see document False 2011-02-11 ENCODE 2 ENCFF873PSH, ENCFF955AMI 689471 ENCODE Processing Pipeline 1b5868daf7a200de8ddd00c9f29a9335 https://www.encodeproject.org/files/ENCFF862MSZ/@@download/ENCFF862MSZ.bed.gz GRCh38 released low read depth, low read length ENCFF148POZ bed narrowPeak replicated peaks ENCSR000DWD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ARB DNA see document see document False 2011-02-11 ENCODE 1, 2 ENCFF537XMF, ENCFF709WNV, ENCFF862MSZ 799663 ENCODE Processing Pipeline bba174497f0a94d497e6b9eb4b8fe0a4 https://www.encodeproject.org/files/ENCFF148POZ/@@download/ENCFF148POZ.bed.gz GRCh38 released low read depth, low read length ENCFF001VPG bed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 905466 Michael Snyder, Stanford a5cc3f9197a9d86b96881b76f6d8a663 https://www.encodeproject.org/files/ENCFF001VPG/@@download/ENCFF001VPG.bed.gz hg19 released low read depth, moderate library complexity, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF002CYO bed narrowPeak optimal idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 351292 ENCODE Consortium Analysis Working Group 44267b4dcba8700327baacc860fcbc08 https://www.encodeproject.org/files/ENCFF002CYO/@@download/ENCFF002CYO.bed.gz hg19 released low read depth, moderate library complexity, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF867NYH bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF090SFR, ENCFF512YJL 6694469 ENCODE Processing Pipeline 4443b2f52359735db8559ae5077158e0 https://www.encodeproject.org/files/ENCFF867NYH/@@download/ENCFF867NYH.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF529CTW bed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF736LSP, ENCFF867NYH, ENCFF953QWL 59369 ENCODE Processing Pipeline f559647127a153384e1d0729e29ada42 https://www.encodeproject.org/files/ENCFF529CTW/@@download/ENCFF529CTW.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF736LSP bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF512YJL 5584155 ENCODE Processing Pipeline 5a0a61ede9d89286e74f9a63e52525c6 https://www.encodeproject.org/files/ENCFF736LSP/@@download/ENCFF736LSP.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF953QWL bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF090SFR 5515829 ENCODE Processing Pipeline a6559f06dba3b2a1a7967c0b4a061391 https://www.encodeproject.org/files/ENCFF953QWL/@@download/ENCFF953QWL.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF739XTO bed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF736LSP, ENCFF867NYH, ENCFF953QWL 92277 ENCODE Processing Pipeline 6a857de42db30576df96a5224a3d56b8 https://www.encodeproject.org/files/ENCFF739XTO/@@download/ENCFF739XTO.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF997SXB bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF061QOJ, ENCFF095BVD 5589037 ENCODE Processing Pipeline decbba0f1d48cd087724ff92cac4575c https://www.encodeproject.org/files/ENCFF997SXB/@@download/ENCFF997SXB.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF325KGM bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF061QOJ, ENCFF095BVD, ENCFF444TNY, ENCFF709WYV 6693331 ENCODE Processing Pipeline 8426882f9c1e9f96649011903ff68939 https://www.encodeproject.org/files/ENCFF325KGM/@@download/ENCFF325KGM.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF127XOZ bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF444TNY, ENCFF709WYV 5234413 ENCODE Processing Pipeline 2540b3700f187069edc19cf750478f22 https://www.encodeproject.org/files/ENCFF127XOZ/@@download/ENCFF127XOZ.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF209OUI bed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF127XOZ, ENCFF325KGM, ENCFF997SXB 59020 ENCODE Processing Pipeline 5ab02af87b3770c3fb0b0d8b956220e9 https://www.encodeproject.org/files/ENCFF209OUI/@@download/ENCFF209OUI.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF426DUB bed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF127XOZ, ENCFF325KGM, ENCFF997SXB 95173 ENCODE Processing Pipeline 9f0888598e4c0a94620276153bf94d46 https://www.encodeproject.org/files/ENCFF426DUB/@@download/ENCFF426DUB.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF834WGJ bed narrowPeak optimal idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF096XNX, ENCFF211EQN, ENCFF396RQL 221226 ENCODE Processing Pipeline 31f39e7e53f6aa68a77cdb6385d89ac6 https://www.encodeproject.org/files/ENCFF834WGJ/@@download/ENCFF834WGJ.bed.gz hg19 released experiment not submitted to GEO ENCFF211EQN bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF129IXY, ENCFF949SXE 7188875 ENCODE Processing Pipeline 9503995f71ff536c4adfe93168cc0182 https://www.encodeproject.org/files/ENCFF211EQN/@@download/ENCFF211EQN.bed.gz hg19 released experiment not submitted to GEO ENCFF096XNX bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF129IXY, ENCFF821SUV 7115701 ENCODE Processing Pipeline 0e76f84baefde2f4cff875157755018e https://www.encodeproject.org/files/ENCFF096XNX/@@download/ENCFF096XNX.bed.gz hg19 released experiment not submitted to GEO ENCFF396RQL bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF129IXY, ENCFF821SUV, ENCFF949SXE 7272347 ENCODE Processing Pipeline 57e11a3a632dbd8f80eb7d732dadf665 https://www.encodeproject.org/files/ENCFF396RQL/@@download/ENCFF396RQL.bed.gz hg19 released experiment not submitted to GEO ENCFF565EUP bed narrowPeak optimal idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF656LUR, ENCFF759XRT, ENCFF841IWY 215562 ENCODE Processing Pipeline 41e7fefe9a39f61ac92989bdc3f65800 https://www.encodeproject.org/files/ENCFF565EUP/@@download/ENCFF565EUP.bed.gz GRCh38 released experiment not submitted to GEO ENCFF610XQH bed narrowPeak conservative idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF096XNX, ENCFF211EQN, ENCFF396RQL 204242 ENCODE Processing Pipeline 78aa33b6144d912670765fcf90542d6c https://www.encodeproject.org/files/ENCFF610XQH/@@download/ENCFF610XQH.bed.gz hg19 released experiment not submitted to GEO ENCFF841IWY bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF230BZG, ENCFF606TJM, ENCFF772UWJ 7275651 ENCODE Processing Pipeline 0f956574719d378351eeb404f2ecd954 https://www.encodeproject.org/files/ENCFF841IWY/@@download/ENCFF841IWY.bed.gz GRCh38 released experiment not submitted to GEO ENCFF512UAX bed narrowPeak conservative idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF656LUR, ENCFF759XRT, ENCFF841IWY 202328 ENCODE Processing Pipeline 8c2990eb357aea977e1bad9d790f93c3 https://www.encodeproject.org/files/ENCFF512UAX/@@download/ENCFF512UAX.bed.gz GRCh38 released experiment not submitted to GEO ENCFF656LUR bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF230BZG, ENCFF606TJM 7093565 ENCODE Processing Pipeline e73bda8d9d9388e1071ea85cf72de74a https://www.encodeproject.org/files/ENCFF656LUR/@@download/ENCFF656LUR.bed.gz GRCh38 released experiment not submitted to GEO ENCFF759XRT bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF230BZG, ENCFF772UWJ 7174514 ENCODE Processing Pipeline 302b16549fbc9c873e4c29dd0799a6d6 https://www.encodeproject.org/files/ENCFF759XRT/@@download/ENCFF759XRT.bed.gz GRCh38 released experiment not submitted to GEO ENCFF903FBL bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF139MVO, ENCFF284BJY, ENCFF356LRY 7079020 ENCODE Processing Pipeline 5adc0944ca4d0fb5a20e8c6463262515 https://www.encodeproject.org/files/ENCFF903FBL/@@download/ENCFF903FBL.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF233FOV bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF139MVO, ENCFF284BJY 6429901 ENCODE Processing Pipeline 17babe61f65b3c87ed973fd946ef985d https://www.encodeproject.org/files/ENCFF233FOV/@@download/ENCFF233FOV.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF188UYW bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF139MVO, ENCFF356LRY 6563813 ENCODE Processing Pipeline 152f4cc7ab9826b2bd18f6611a240141 https://www.encodeproject.org/files/ENCFF188UYW/@@download/ENCFF188UYW.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF955QYT bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF338MSY 6308309 ENCODE Processing Pipeline c8db82c453a30d55f593fb78cda1394b https://www.encodeproject.org/files/ENCFF955QYT/@@download/ENCFF955QYT.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF106DEP bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF338MSY, ENCFF910XWG 6927149 ENCODE Processing Pipeline 3f5756c8c7486322b5d5b7c5ac9f24d5 https://www.encodeproject.org/files/ENCFF106DEP/@@download/ENCFF106DEP.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF018SYW bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF910XWG 6237873 ENCODE Processing Pipeline c2d4bae5eb21f133e94200a351d4fd6e https://www.encodeproject.org/files/ENCFF018SYW/@@download/ENCFF018SYW.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF301FKQ bed narrowPeak optimal idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF018SYW, ENCFF106DEP, ENCFF419RSJ, ENCFF955QYT 149072 ENCODE Processing Pipeline bb60d5ef02304ef3e26cf1135dd4057c https://www.encodeproject.org/files/ENCFF301FKQ/@@download/ENCFF301FKQ.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF350TYH bed narrowPeak conservative idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF018SYW, ENCFF106DEP, ENCFF419RSJ, ENCFF955QYT 142809 ENCODE Processing Pipeline d92a22a11cd26a71da777be1ddd7815a https://www.encodeproject.org/files/ENCFF350TYH/@@download/ENCFF350TYH.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF669BPX bed narrowPeak conservative idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF188UYW, ENCFF233FOV, ENCFF903FBL 117901 ENCODE Processing Pipeline dac6a1df1646df37753b3993bb9c83f3 https://www.encodeproject.org/files/ENCFF669BPX/@@download/ENCFF669BPX.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF898FAQ bed narrowPeak optimal idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF188UYW, ENCFF233FOV, ENCFF903FBL 124815 ENCODE Processing Pipeline e289ccf3c9b78c0755899343b35f0f61 https://www.encodeproject.org/files/ENCFF898FAQ/@@download/ENCFF898FAQ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF415MTB bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF424AYM, ENCFF990ZOB 7060962 ENCODE Processing Pipeline 60dfebafea7c06794e27f9c17994ba44 https://www.encodeproject.org/files/ENCFF415MTB/@@download/ENCFF415MTB.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF996DAB bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF130RDX, ENCFF424AYM, ENCFF990ZOB 7376876 ENCODE Processing Pipeline e5bd2c484aaa549f135b6ae7525a4173 https://www.encodeproject.org/files/ENCFF996DAB/@@download/ENCFF996DAB.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF606TEA bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF130RDX, ENCFF990ZOB 7210069 ENCODE Processing Pipeline 48f782a7be2f1c2cbeb3286ef0fcc710 https://www.encodeproject.org/files/ENCFF606TEA/@@download/ENCFF606TEA.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF583QKD bed narrowPeak conservative idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF415MTB, ENCFF606TEA, ENCFF996DAB 88975 ENCODE Processing Pipeline 7addb56110a37189923a726b167981d2 https://www.encodeproject.org/files/ENCFF583QKD/@@download/ENCFF583QKD.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF545RHH bed narrowPeak optimal idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF415MTB, ENCFF606TEA, ENCFF996DAB 114029 ENCODE Processing Pipeline 5ba0b64c3abc78bf61a940ba47b5cb4f https://www.encodeproject.org/files/ENCFF545RHH/@@download/ENCFF545RHH.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF970WRP bed narrowPeak conservative idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF222THM, ENCFF385SWE, ENCFF419RSJ, ENCFF894OHV 88583 ENCODE Processing Pipeline ac89010dd33b4372f59bfc4648a8ef6e https://www.encodeproject.org/files/ENCFF970WRP/@@download/ENCFF970WRP.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF865OKF bed narrowPeak optimal idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF222THM, ENCFF385SWE, ENCFF419RSJ, ENCFF894OHV 114417 ENCODE Processing Pipeline 51caa09eff3bc25c819286358f93a8e0 https://www.encodeproject.org/files/ENCFF865OKF/@@download/ENCFF865OKF.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF222THM bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF165STC 6997255 ENCODE Processing Pipeline 4b3663d1fdd04490087f068dfaafd16a https://www.encodeproject.org/files/ENCFF222THM/@@download/ENCFF222THM.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF385SWE bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF694KHP 7179481 ENCODE Processing Pipeline f5d0c7b825c7ea06024088e686b61c36 https://www.encodeproject.org/files/ENCFF385SWE/@@download/ENCFF385SWE.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF894OHV bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF165STC, ENCFF694KHP 7378120 ENCODE Processing Pipeline 003a89f5c4e821d3a3a0130d1e63f5b1 https://www.encodeproject.org/files/ENCFF894OHV/@@download/ENCFF894OHV.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF119IJS bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF652HPU, ENCFF860JBC 4446870 ENCODE Processing Pipeline 7defd19a814aff71e31ce686a45db6db https://www.encodeproject.org/files/ENCFF119IJS/@@download/ENCFF119IJS.bed.gz GRCh38 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF191IRT bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF652HPU 6457184 ENCODE Processing Pipeline 2084f98a66769daa66716ad4d9208174 https://www.encodeproject.org/files/ENCFF191IRT/@@download/ENCFF191IRT.bed.gz GRCh38 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF884DZX bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF860JBC 5978308 ENCODE Processing Pipeline e692e8265200557dc1c3583c6057e0d4 https://www.encodeproject.org/files/ENCFF884DZX/@@download/ENCFF884DZX.bed.gz GRCh38 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF118EOA bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF162YLU, ENCFF207FFX, ENCFF245PJA, ENCFF574XYY 4441877 ENCODE Processing Pipeline a073d466810f865c5036a394aa4150d3 https://www.encodeproject.org/files/ENCFF118EOA/@@download/ENCFF118EOA.bed.gz hg19 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF875ITP bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF207FFX, ENCFF245PJA, ENCFF574XYY 6496431 ENCODE Processing Pipeline 573f75d1fa10e63ede230866edb301d9 https://www.encodeproject.org/files/ENCFF875ITP/@@download/ENCFF875ITP.bed.gz hg19 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF267CBS bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF162YLU, ENCFF245PJA 5987659 ENCODE Processing Pipeline ddfca0067976c24be42533ed23458433 https://www.encodeproject.org/files/ENCFF267CBS/@@download/ENCFF267CBS.bed.gz hg19 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF714XHL bed narrowPeak optimal idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF001TDO, ENCFF118EOA, ENCFF267CBS, ENCFF875ITP 153694 ENCODE Processing Pipeline cfcf61727521d15bd154f71181a11674 https://www.encodeproject.org/files/ENCFF714XHL/@@download/ENCFF714XHL.bed.gz hg19 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF825ZCR bed narrowPeak conservative idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF119IJS, ENCFF191IRT, ENCFF419RSJ, ENCFF884DZX 115699 ENCODE Processing Pipeline 82a72bac4ab2f8aa5d1f0565b3cd2857 https://www.encodeproject.org/files/ENCFF825ZCR/@@download/ENCFF825ZCR.bed.gz GRCh38 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF868NFS bed narrowPeak conservative idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF001TDO, ENCFF118EOA, ENCFF267CBS, ENCFF875ITP 115468 ENCODE Processing Pipeline 50594c6a20322d3d1c79fd80752cd463 https://www.encodeproject.org/files/ENCFF868NFS/@@download/ENCFF868NFS.bed.gz hg19 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF806CQB bed narrowPeak optimal idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF119IJS, ENCFF191IRT, ENCFF419RSJ, ENCFF884DZX 158450 ENCODE Processing Pipeline 6c11ae767907b2c40166f00135ee589e https://www.encodeproject.org/files/ENCFF806CQB/@@download/ENCFF806CQB.bed.gz GRCh38 released inconsistent platforms experiment not submitted to GEO partially characterized antibody ENCFF001VNZ bed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 373965 Michael Snyder, Stanford 8c433880d36d2a0b9ffee991cba1904e https://www.encodeproject.org/files/ENCFF001VNZ/@@download/ENCFF001VNZ.bed.gz hg19 released missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read length ENCFF002CXJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 207601 ENCODE Consortium Analysis Working Group 7ba84d9348d64c9aa4530e5b7b77c40e https://www.encodeproject.org/files/ENCFF002CXJ/@@download/ENCFF002CXJ.bed.gz hg19 released missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read length ENCFF002CMO bed narrowPeak optimal idr thresholded peaks ENCSR000BNL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 78442 ENCODE Consortium Analysis Working Group 2828cc5054bd1a82a2799daebfd143a3 https://www.encodeproject.org/files/ENCFF002CMO/@@download/ENCFF002CMO.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF002CLS bed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 892491 ENCODE Consortium Analysis Working Group 749db3fdd18af5e96e12683dc67852b6 https://www.encodeproject.org/files/ENCFF002CLS/@@download/ENCFF002CLS.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF349NJE bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234NVU, ENCFF391HFU, ENCFF691BQZ, ENCFF913HVS 5145036 ENCODE Processing Pipeline 7ae05f4b87eb1b8b16ceaa490a09d31d https://www.encodeproject.org/files/ENCFF349NJE/@@download/ENCFF349NJE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF667VJC bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF691BQZ, ENCFF913HVS 4336302 ENCODE Processing Pipeline dda20a17ec0748c3d2c9adee1841e951 https://www.encodeproject.org/files/ENCFF667VJC/@@download/ENCFF667VJC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF822CTO bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234NVU, ENCFF391HFU 3326942 ENCODE Processing Pipeline df0bd3dad982550d48aed690ce4afe47 https://www.encodeproject.org/files/ENCFF822CTO/@@download/ENCFF822CTO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF101MTI bed narrowPeak conservative idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NJE, ENCFF419RSJ, ENCFF667VJC, ENCFF822CTO 695018 ENCODE Processing Pipeline 5f488b52e2d086ba8f2d1a0a064d3b02 https://www.encodeproject.org/files/ENCFF101MTI/@@download/ENCFF101MTI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF119XFJ bed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NJE, ENCFF419RSJ, ENCFF667VJC, ENCFF822CTO 801899 ENCODE Processing Pipeline d188231ecd51e08a69f22a2b2faf23f6 https://www.encodeproject.org/files/ENCFF119XFJ/@@download/ENCFF119XFJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF767ZAZ bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF242FHJ, ENCFF614AZS, ENCFF891JES 7294856 ENCODE Processing Pipeline edd8d0f8099063cffdbc8f55a48a1cd1 https://www.encodeproject.org/files/ENCFF767ZAZ/@@download/ENCFF767ZAZ.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF464FVG bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF242FHJ, ENCFF891JES 7036651 ENCODE Processing Pipeline ccdcaf9293bb0c0d8e5b0cd30f95ece0 https://www.encodeproject.org/files/ENCFF464FVG/@@download/ENCFF464FVG.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF244XAR bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF242FHJ, ENCFF614AZS 7030599 ENCODE Processing Pipeline 09abb517586ae010888de294cb016b61 https://www.encodeproject.org/files/ENCFF244XAR/@@download/ENCFF244XAR.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF363HUX bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF059OPC, ENCFF695GTB 6976623 ENCODE Processing Pipeline acae3c176f8c8063aab1f0537f0745ea https://www.encodeproject.org/files/ENCFF363HUX/@@download/ENCFF363HUX.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF380CHE bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF059OPC, ENCFF115BME 6962935 ENCODE Processing Pipeline c95ebc18ec087162c551bd016770f18a https://www.encodeproject.org/files/ENCFF380CHE/@@download/ENCFF380CHE.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF723UBG bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF059OPC, ENCFF115BME, ENCFF695GTB 7298045 ENCODE Processing Pipeline cd88aa0117d4a602315369482a4a59c7 https://www.encodeproject.org/files/ENCFF723UBG/@@download/ENCFF723UBG.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF815REG bed narrowPeak conservative idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF363HUX, ENCFF380CHE, ENCFF419RSJ, ENCFF723UBG 359849 ENCODE Processing Pipeline 29a3e6d2b254185994479efa6057fd2b https://www.encodeproject.org/files/ENCFF815REG/@@download/ENCFF815REG.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF638WDU bed narrowPeak optimal idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF363HUX, ENCFF380CHE, ENCFF419RSJ, ENCFF723UBG 452199 ENCODE Processing Pipeline f5df8fa0af9688603bfec4e9a641a7f9 https://www.encodeproject.org/files/ENCFF638WDU/@@download/ENCFF638WDU.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF835YLR bed narrowPeak optimal idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF244XAR, ENCFF464FVG, ENCFF767ZAZ 376136 ENCODE Processing Pipeline f318a5df6df3b0f5af86990b56d56fe1 https://www.encodeproject.org/files/ENCFF835YLR/@@download/ENCFF835YLR.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF792DSI bed narrowPeak conservative idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF244XAR, ENCFF464FVG, ENCFF767ZAZ 290783 ENCODE Processing Pipeline a3e585939b9783d2498a5048909eb2b1 https://www.encodeproject.org/files/ENCFF792DSI/@@download/ENCFF792DSI.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF501SMZ bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF456BYT, ENCFF573SRY 5315049 ENCODE Processing Pipeline 42017006100aada57107d4935adbead8 https://www.encodeproject.org/files/ENCFF501SMZ/@@download/ENCFF501SMZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF013REF bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF321CYT, ENCFF514LUN 5482870 ENCODE Processing Pipeline 2f77da514212a67e6b9b46c0f1f7fb40 https://www.encodeproject.org/files/ENCFF013REF/@@download/ENCFF013REF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF838LKB bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF321CYT, ENCFF456BYT, ENCFF514LUN, ENCFF573SRY 6696807 ENCODE Processing Pipeline bda0d47c90aa43da4a155d81eda82233 https://www.encodeproject.org/files/ENCFF838LKB/@@download/ENCFF838LKB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF650VQU bed narrowPeak conservative idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF013REF, ENCFF501SMZ, ENCFF838LKB 128541 ENCODE Processing Pipeline 4a3962a08ffd5b8a05af4443c46c931f https://www.encodeproject.org/files/ENCFF650VQU/@@download/ENCFF650VQU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF010STZ bed narrowPeak optimal idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF013REF, ENCFF501SMZ, ENCFF838LKB 141550 ENCODE Processing Pipeline 96e79c69c0c270cedd9c75735c44d6bf https://www.encodeproject.org/files/ENCFF010STZ/@@download/ENCFF010STZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF106WRW bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 6366354 ENCODE Processing Pipeline 87292ab1949c87c6aaaff0e84e4cf796 https://www.encodeproject.org/files/ENCFF106WRW/@@download/ENCFF106WRW.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF134OVY bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF361KFD, ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 7106902 ENCODE Processing Pipeline 82477c0d9e81006cd37be7bcac866750 https://www.encodeproject.org/files/ENCFF134OVY/@@download/ENCFF134OVY.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF510ZUJ bed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF106WRW, ENCFF134OVY, ENCFF604XWK 290077 ENCODE Processing Pipeline 854bcc3923d7bcf9c470288133d1a39a https://www.encodeproject.org/files/ENCFF510ZUJ/@@download/ENCFF510ZUJ.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF604XWK bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF361KFD, ENCFF444TNY, ENCFF847YDJ 6853798 ENCODE Processing Pipeline 0ce20453e7cc72bebc28e6ce7dddc3cf https://www.encodeproject.org/files/ENCFF604XWK/@@download/ENCFF604XWK.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF712AXK bed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF106WRW, ENCFF134OVY, ENCFF604XWK 402996 ENCODE Processing Pipeline d4ef75a204c84efaad5df40feb9c957b https://www.encodeproject.org/files/ENCFF712AXK/@@download/ENCFF712AXK.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF316RDN bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF908MXL 6196811 ENCODE Processing Pipeline 999516396eec2cde6ea1b7a2f132c990 https://www.encodeproject.org/files/ENCFF316RDN/@@download/ENCFF316RDN.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF951LYB bed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF316RDN, ENCFF419RSJ, ENCFF526CVF, ENCFF864BPS 289679 ENCODE Processing Pipeline 133cad071ec1f2d8337e4f02f3575215 https://www.encodeproject.org/files/ENCFF951LYB/@@download/ENCFF951LYB.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF526CVF bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN 6743951 ENCODE Processing Pipeline 5cf4d36156dd1ec9a6f7b50c46b31fcb https://www.encodeproject.org/files/ENCFF526CVF/@@download/ENCFF526CVF.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF864BPS bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN, ENCFF908MXL 7005842 ENCODE Processing Pipeline 5be9c56718d6ad65f3f2adf8ad6240f2 https://www.encodeproject.org/files/ENCFF864BPS/@@download/ENCFF864BPS.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF194VBK bed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF316RDN, ENCFF419RSJ, ENCFF526CVF, ENCFF864BPS 405789 ENCODE Processing Pipeline 851d5f8c99376f6433641934c9eeeb00 https://www.encodeproject.org/files/ENCFF194VBK/@@download/ENCFF194VBK.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF001UWM bed narrowPeak peaks ENCSR000EKQ DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens G1 DNA see document see document False 2012-08-28 ENCODE 1841349 Gregory Crawford, Duke 580381acc78f88955a2c70e70e2aee0a https://www.encodeproject.org/files/ENCFF001UWM/@@download/ENCFF001UWM.bed.gz hg19 released mixed read lengths missing derived_from, mismatched file status, biological replicates with identical biosample extremely low spot score ENCFF001XGQ bed narrowPeak peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 1 ENCFF001FWE 444613 John Stamatoyannopoulos, UW 93859de4af3813cd4d13749dd60121e2 https://www.encodeproject.org/files/ENCFF001XGQ/@@download/ENCFF001XGQ.bed.gz hg19 archived mild to moderate bottlenecking, low read length insufficient read depth ENCFF001XGR bed narrowPeak peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 2 ENCFF001FWI 409399 John Stamatoyannopoulos, UW c756b072eb8d34fe2c52bba15f9dc5d5 https://www.encodeproject.org/files/ENCFF001XGR/@@download/ENCFF001XGR.bed.gz hg19 archived mild to moderate bottlenecking, low read length insufficient read depth ENCFF736MDX bed narrowPeak peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 1 ENCFF465CVS, ENCFF481KZO 2555399 ENCODE Processing Pipeline 68bacafc7504a6cd5064a6ff9169c32d https://www.encodeproject.org/files/ENCFF736MDX/@@download/ENCFF736MDX.bed.gz hg19 released mild to moderate bottlenecking, low read length insufficient read depth ENCFF828STE bed narrowPeak peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 2 ENCFF162YFK, ENCFF465CVS 2615189 ENCODE Processing Pipeline 862d85c3e69e525ddd2bc87d66183142 https://www.encodeproject.org/files/ENCFF828STE/@@download/ENCFF828STE.bed.gz hg19 released mild to moderate bottlenecking, low read length insufficient read depth ENCFF473DJX bed narrowPeak peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 1, 2 ENCFF162YFK, ENCFF465CVS, ENCFF481KZO 1514745 ENCODE Processing Pipeline d2a6bd23506e4942bdb2da13a957bbd7 https://www.encodeproject.org/files/ENCFF473DJX/@@download/ENCFF473DJX.bed.gz hg19 released mild to moderate bottlenecking, low read length insufficient read depth ENCFF662VQR bed narrowPeak peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 1 ENCFF873PSH, ENCFF989ORU 2593462 ENCODE Processing Pipeline 97648359778dff60c316de510f221087 https://www.encodeproject.org/files/ENCFF662VQR/@@download/ENCFF662VQR.bed.gz GRCh38 released mild to moderate bottlenecking, low read length insufficient read depth ENCFF929PEE bed narrowPeak peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 1, 2 ENCFF873PSH, ENCFF975JFV, ENCFF989ORU 1516473 ENCODE Processing Pipeline a24b48a3b13f5e8a124ff2b68f206dba https://www.encodeproject.org/files/ENCFF929PEE/@@download/ENCFF929PEE.bed.gz GRCh38 released mild to moderate bottlenecking, low read length insufficient read depth ENCFF873OAY bed narrowPeak peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 2 ENCFF873PSH, ENCFF975JFV 2625225 ENCODE Processing Pipeline 208042829c479452dd89d2b05c7d40f0 https://www.encodeproject.org/files/ENCFF873OAY/@@download/ENCFF873OAY.bed.gz GRCh38 released mild to moderate bottlenecking, low read length insufficient read depth ENCFF676RWX bed narrowPeak replicated peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 1, 2 ENCFF473DJX, ENCFF736MDX, ENCFF828STE 1553012 ENCODE Processing Pipeline 876246c2551fff9499562f668448ba80 https://www.encodeproject.org/files/ENCFF676RWX/@@download/ENCFF676RWX.bed.gz hg19 released mild to moderate bottlenecking, low read length insufficient read depth ENCFF631VWP bed narrowPeak replicated peaks ENCSR000DWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000AQW DNA see document see document False 2011-02-11 ENCODE 1, 2 ENCFF662VQR, ENCFF873OAY, ENCFF929PEE 1550285 ENCODE Processing Pipeline b1b1a74b8a714907d071d9f4730d57c3 https://www.encodeproject.org/files/ENCFF631VWP/@@download/ENCFF631VWP.bed.gz GRCh38 released mild to moderate bottlenecking, low read length insufficient read depth ENCFF001VOL bed narrowPeak peaks ENCSR000EHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 2127 Michael Snyder, Stanford 9123418a8d342a40a1f9614cbfca0806 https://www.encodeproject.org/files/ENCFF001VOL/@@download/ENCFF001VOL.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CXT bed narrowPeak optimal idr thresholded peaks ENCSR000EHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 4627 ENCODE Consortium Analysis Working Group bda0160eadd3d7e99ccac755fa0b2e2c https://www.encodeproject.org/files/ENCFF002CXT/@@download/ENCFF002CXT.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001VNY bed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 167203 Michael Snyder, Stanford 8f67ba8132ba74601046c928a46fac93 https://www.encodeproject.org/files/ENCFF001VNY/@@download/ENCFF001VNY.bed.gz hg19 released missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read length ENCFF002CXI bed narrowPeak optimal idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 97329 ENCODE Consortium Analysis Working Group 59e4f965b7bd0a75446915be7160aa9b https://www.encodeproject.org/files/ENCFF002CXI/@@download/ENCFF002CXI.bed.gz hg19 released missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read length ENCFF718ZLW bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF719XQY 5768360 ENCODE Processing Pipeline f1f68f95d037e8c649e5ad40f57950a8 https://www.encodeproject.org/files/ENCFF718ZLW/@@download/ENCFF718ZLW.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF105RJJ bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF544DDY, ENCFF719XQY 7003878 ENCODE Processing Pipeline dce07d13585a7349b2ed2cb6584240cc https://www.encodeproject.org/files/ENCFF105RJJ/@@download/ENCFF105RJJ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF515RUZ bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF544DDY 6431040 ENCODE Processing Pipeline 0c755a6f2bb9135aa0a3421567c13e9c https://www.encodeproject.org/files/ENCFF515RUZ/@@download/ENCFF515RUZ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF666MKU bed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF105RJJ, ENCFF419RSJ, ENCFF515RUZ, ENCFF718ZLW 165150 ENCODE Processing Pipeline dfec03e4332932d52d1345a1eec18895 https://www.encodeproject.org/files/ENCFF666MKU/@@download/ENCFF666MKU.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF741CLJ bed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF105RJJ, ENCFF419RSJ, ENCFF515RUZ, ENCFF718ZLW 303753 ENCODE Processing Pipeline fd614180ded8d33a00c702f5fc83e723 https://www.encodeproject.org/files/ENCFF741CLJ/@@download/ENCFF741CLJ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF844TQX bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF107VJA, ENCFF444TNY 6439920 ENCODE Processing Pipeline 282e4782f8494d85976bcf5d26aef0a7 https://www.encodeproject.org/files/ENCFF844TQX/@@download/ENCFF844TQX.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF820ZTK bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF082GBO, ENCFF708IYO 5560359 ENCODE Processing Pipeline f8f01706849c4eee56860e0693bd4143 https://www.encodeproject.org/files/ENCFF820ZTK/@@download/ENCFF820ZTK.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF576LFG bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF082GBO, ENCFF107VJA, ENCFF444TNY, ENCFF708IYO 6999284 ENCODE Processing Pipeline 24ec94b58a385ffd60d08cb75a51c5b3 https://www.encodeproject.org/files/ENCFF576LFG/@@download/ENCFF576LFG.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF513CNT bed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF576LFG, ENCFF820ZTK, ENCFF844TQX 165635 ENCODE Processing Pipeline 3db56811c1a96845e566ea81b37416ed https://www.encodeproject.org/files/ENCFF513CNT/@@download/ENCFF513CNT.bed.gz hg19 released borderline replicate concordance, low read depth mismatched status ENCFF972LPT bed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF576LFG, ENCFF820ZTK, ENCFF844TQX 305539 ENCODE Processing Pipeline 1563fb6abad7b6e01e1a4b592835b343 https://www.encodeproject.org/files/ENCFF972LPT/@@download/ENCFF972LPT.bed.gz hg19 released borderline replicate concordance, low read depth mismatched status ENCFF001VNX bed narrowPeak peaks ENCSR000FAF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 29060 Sherman Weissman, Yale 3d953871c7379fe1b0ce7a5c0776b24e https://www.encodeproject.org/files/ENCFF001VNX/@@download/ENCFF001VNX.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CXH bed narrowPeak optimal idr thresholded peaks ENCSR000FAF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 53709 ENCODE Consortium Analysis Working Group 3fa5b2aaff7064f6bb43628c6a33c4a5 https://www.encodeproject.org/files/ENCFF002CXH/@@download/ENCFF002CXH.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF667SBT bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF089EVB, ENCFF548ERH 5596224 ENCODE Processing Pipeline 0590079ae7fb20d34a1ed34117199a3b https://www.encodeproject.org/files/ENCFF667SBT/@@download/ENCFF667SBT.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF316SRU bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF180RGQ, ENCFF548ERH 5694368 ENCODE Processing Pipeline 846b3c258e98742cc867e2e1be70d7d5 https://www.encodeproject.org/files/ENCFF316SRU/@@download/ENCFF316SRU.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF523JZB bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF089EVB, ENCFF180RGQ, ENCFF548ERH 6591925 ENCODE Processing Pipeline 6dcb369ee8c1345a052f3c533b22b014 https://www.encodeproject.org/files/ENCFF523JZB/@@download/ENCFF523JZB.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF404ETV bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF810IRF 5503571 ENCODE Processing Pipeline 298365b6d9ae9e26766c015673e12c97 https://www.encodeproject.org/files/ENCFF404ETV/@@download/ENCFF404ETV.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF848WUG bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF760JNE 5468581 ENCODE Processing Pipeline d1afbc43dbc56cc654c1007258b0e077 https://www.encodeproject.org/files/ENCFF848WUG/@@download/ENCFF848WUG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF883IIP bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF760JNE, ENCFF810IRF 6422432 ENCODE Processing Pipeline 6388f49d3f21ebe872522425e07c00df https://www.encodeproject.org/files/ENCFF883IIP/@@download/ENCFF883IIP.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF007LBS bed narrowPeak conservative idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF404ETV, ENCFF419RSJ, ENCFF848WUG, ENCFF883IIP 77349 ENCODE Processing Pipeline fc286d16abbb2ece5f19f58026a21c6e https://www.encodeproject.org/files/ENCFF007LBS/@@download/ENCFF007LBS.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF952MVU bed narrowPeak optimal idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF404ETV, ENCFF419RSJ, ENCFF848WUG, ENCFF883IIP 101636 ENCODE Processing Pipeline 5f109587b86a22367553b0cbbf888dc2 https://www.encodeproject.org/files/ENCFF952MVU/@@download/ENCFF952MVU.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF018SRT bed narrowPeak conservative idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF316SRU, ENCFF523JZB, ENCFF667SBT 63131 ENCODE Processing Pipeline ae730decaca2abf01e955eb963be0284 https://www.encodeproject.org/files/ENCFF018SRT/@@download/ENCFF018SRT.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF009DUY bed narrowPeak optimal idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF316SRU, ENCFF523JZB, ENCFF667SBT 81569 ENCODE Processing Pipeline 5ec5b91ac03669cedec82fbe43737f45 https://www.encodeproject.org/files/ENCFF009DUY/@@download/ENCFF009DUY.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF448HGE bed narrowPeak peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF273YNM, ENCFF847POA 6392132 ENCODE Processing Pipeline 4000e524dfff99b0d2a25ee478ce2524 https://www.encodeproject.org/files/ENCFF448HGE/@@download/ENCFF448HGE.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF160OTS bed narrowPeak peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF273YNM, ENCFF709ODW 6512204 ENCODE Processing Pipeline 41cf49180cb86a4c4965df630ab09f8e https://www.encodeproject.org/files/ENCFF160OTS/@@download/ENCFF160OTS.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF450JEG bed narrowPeak peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF273YNM, ENCFF709ODW, ENCFF847POA 6944952 ENCODE Processing Pipeline 88e69c22dfc9b3999227bff7c2ce7763 https://www.encodeproject.org/files/ENCFF450JEG/@@download/ENCFF450JEG.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF262UCE bed narrowPeak peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF407GAB 6336297 ENCODE Processing Pipeline 90adc1604bc833bfa1a190a2e6fa6ee1 https://www.encodeproject.org/files/ENCFF262UCE/@@download/ENCFF262UCE.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF528GDJ bed narrowPeak peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF137QTZ, ENCFF407GAB 6836892 ENCODE Processing Pipeline a63b8f0fc96d85cf0b30e42ceabc940d https://www.encodeproject.org/files/ENCFF528GDJ/@@download/ENCFF528GDJ.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF710ZND bed narrowPeak peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF137QTZ 6223332 ENCODE Processing Pipeline 025f476658eb3ac843c3bd4e4f69ac55 https://www.encodeproject.org/files/ENCFF710ZND/@@download/ENCFF710ZND.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF893ZPT bed narrowPeak optimal idr thresholded peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF262UCE, ENCFF419RSJ, ENCFF528GDJ, ENCFF710ZND 306057 ENCODE Processing Pipeline 935053200e2472992305d630c3b5aeca https://www.encodeproject.org/files/ENCFF893ZPT/@@download/ENCFF893ZPT.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF713QNO bed narrowPeak conservative idr thresholded peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF160OTS, ENCFF448HGE, ENCFF450JEG 256820 ENCODE Processing Pipeline b23b96ae0a0c9d8859b83559f6b05df6 https://www.encodeproject.org/files/ENCFF713QNO/@@download/ENCFF713QNO.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF904ZGQ bed narrowPeak optimal idr thresholded peaks ENCSR338QAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELK1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF160OTS, ENCFF448HGE, ENCFF450JEG 263633 ENCODE Processing Pipeline dc90868e2e101d978fcf0d5d22f77880 https://www.encodeproject.org/files/ENCFF904ZGQ/@@download/ENCFF904ZGQ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments insufficient replicate concordance ENCFF720GTN bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF503IYW 6297985 ENCODE Processing Pipeline 8a69653d8232fb391d7e70b377170e74 https://www.encodeproject.org/files/ENCFF720GTN/@@download/ENCFF720GTN.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF409VRO bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF540VVE 5976723 ENCODE Processing Pipeline b3c74e0b2d91ec162784edba77f5fca4 https://www.encodeproject.org/files/ENCFF409VRO/@@download/ENCFF409VRO.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF544LQA bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF503IYW, ENCFF540VVE 6670094 ENCODE Processing Pipeline 770addb39913f64e89f2ae9ffac3b2c1 https://www.encodeproject.org/files/ENCFF544LQA/@@download/ENCFF544LQA.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF247ULP bed narrowPeak optimal idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF409VRO, ENCFF419RSJ, ENCFF544LQA, ENCFF720GTN 339930 ENCODE Processing Pipeline eabb60aab577cde931169e93d976d842 https://www.encodeproject.org/files/ENCFF247ULP/@@download/ENCFF247ULP.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF472SCD bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF243GPO, ENCFF538HUN 6005884 ENCODE Processing Pipeline 2bab94bc6306c9d1f5743617b8c62493 https://www.encodeproject.org/files/ENCFF472SCD/@@download/ENCFF472SCD.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF260RNL bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF243GPO, ENCFF775KLX 6032960 ENCODE Processing Pipeline f8148af9c2ae9084fb7a592c87363903 https://www.encodeproject.org/files/ENCFF260RNL/@@download/ENCFF260RNL.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF721LDD bed narrowPeak optimal idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF195EMK, ENCFF260RNL, ENCFF472SCD 349948 ENCODE Processing Pipeline ce3af08120a96fe3dd29ae6b4b209bae https://www.encodeproject.org/files/ENCFF721LDD/@@download/ENCFF721LDD.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF195EMK bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF243GPO, ENCFF538HUN, ENCFF775KLX 6703095 ENCODE Processing Pipeline 585759a6549be2f387282f46e4840c70 https://www.encodeproject.org/files/ENCFF195EMK/@@download/ENCFF195EMK.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF197LEN bed narrowPeak conservative idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF195EMK, ENCFF260RNL, ENCFF472SCD 339648 ENCODE Processing Pipeline 624b9ac0430f98821d11e93a624f1483 https://www.encodeproject.org/files/ENCFF197LEN/@@download/ENCFF197LEN.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF963OMH bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF795XBH 7060584 ENCODE Processing Pipeline c27b230a997f55b6d03766cadf4d692f https://www.encodeproject.org/files/ENCFF963OMH/@@download/ENCFF963OMH.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF261YCK bed narrowPeak conservative idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF100GOE, ENCFF419RSJ, ENCFF515FAV, ENCFF963OMH 343232 ENCODE Processing Pipeline 4afb866025b1d03b43c03d677989f767 https://www.encodeproject.org/files/ENCFF261YCK/@@download/ENCFF261YCK.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF354QYM bed narrowPeak optimal idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF100GOE, ENCFF419RSJ, ENCFF515FAV, ENCFF963OMH 413663 ENCODE Processing Pipeline fff52e8bd25e2bdfe21098cee0a7dc56 https://www.encodeproject.org/files/ENCFF354QYM/@@download/ENCFF354QYM.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF515FAV bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF070MZX 6619030 ENCODE Processing Pipeline 48366b3c2ed51cac2f10f78eb4b0d06c https://www.encodeproject.org/files/ENCFF515FAV/@@download/ENCFF515FAV.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF100GOE bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF070MZX, ENCFF795XBH 7270021 ENCODE Processing Pipeline b40b5b35d6fcf3c17038e1f5d77a4d4f https://www.encodeproject.org/files/ENCFF100GOE/@@download/ENCFF100GOE.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF179TYN bed narrowPeak conservative idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF250VQN, ENCFF676RSO, ENCFF833HIY 343223 ENCODE Processing Pipeline bd96e0762553afef00b3610bcbf102cd https://www.encodeproject.org/files/ENCFF179TYN/@@download/ENCFF179TYN.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched status, mismatched file status ENCFF250VQN bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF488CVL, ENCFF744LSD 6611423 ENCODE Processing Pipeline 2b3b093652493683ee15e2cad32627d2 https://www.encodeproject.org/files/ENCFF250VQN/@@download/ENCFF250VQN.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF701MXF bed narrowPeak optimal idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF250VQN, ENCFF676RSO, ENCFF833HIY 415746 ENCODE Processing Pipeline 708b867532b9183badb53e580e240bf4 https://www.encodeproject.org/files/ENCFF701MXF/@@download/ENCFF701MXF.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched status, mismatched file status ENCFF833HIY bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF488CVL, ENCFF744LSD, ENCFF826XVE 7268911 ENCODE Processing Pipeline 21906adc3fe5725ecb68b1b4f7718061 https://www.encodeproject.org/files/ENCFF833HIY/@@download/ENCFF833HIY.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF142DIA bed narrowPeak peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 2 ENCFF245PJA, ENCFF534ERV, ENCFF574XYY 4806380 ENCODE Processing Pipeline a91d779c929d9a1dd264ff466d2a2eb1 https://www.encodeproject.org/files/ENCFF142DIA/@@download/ENCFF142DIA.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF388OJZ bed narrowPeak peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 2 ENCFF370NVV 4723796 ENCODE Processing Pipeline a72d60e761886118a0244ef838450bc5 https://www.encodeproject.org/files/ENCFF388OJZ/@@download/ENCFF388OJZ.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF489UOU bed narrowPeak peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 1 ENCFF966VXD 4207518 ENCODE Processing Pipeline 7d66074b6c560c9a1865b439a3a3408d https://www.encodeproject.org/files/ENCFF489UOU/@@download/ENCFF489UOU.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF836OJZ bed narrowPeak peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 1, 2 ENCFF370NVV, ENCFF966VXD 5616686 ENCODE Processing Pipeline 25d699d9c86ec8ce788d1cf0f3ebdde3 https://www.encodeproject.org/files/ENCFF836OJZ/@@download/ENCFF836OJZ.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF249ZSW bed narrowPeak conservative idr thresholded peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 1, 2 ENCFF388OJZ, ENCFF419RSJ, ENCFF489UOU, ENCFF836OJZ 45840 ENCODE Processing Pipeline c08a771287de84e18a0869e21beb2a08 https://www.encodeproject.org/files/ENCFF249ZSW/@@download/ENCFF249ZSW.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF711TXI bed narrowPeak optimal idr thresholded peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 1, 2 ENCFF388OJZ, ENCFF419RSJ, ENCFF489UOU, ENCFF836OJZ 53917 ENCODE Processing Pipeline 0cd38f8774c3b11af5f949e8498f9a86 https://www.encodeproject.org/files/ENCFF711TXI/@@download/ENCFF711TXI.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF024ZDC bed narrowPeak peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 1 ENCFF574XYY, ENCFF868XSP 4226006 ENCODE Processing Pipeline b2531c41514fd409f88dc336a9143d0d https://www.encodeproject.org/files/ENCFF024ZDC/@@download/ENCFF024ZDC.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF693DIG bed narrowPeak peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 1, 2 ENCFF245PJA, ENCFF534ERV, ENCFF574XYY, ENCFF868XSP 5619207 ENCODE Processing Pipeline c1ba5fd8962373096655ab48b4fdf12b https://www.encodeproject.org/files/ENCFF693DIG/@@download/ENCFF693DIG.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF513REQ bed narrowPeak conservative idr thresholded peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF024ZDC, ENCFF142DIA, ENCFF693DIG 45879 ENCODE Processing Pipeline 03e585e751d19df5662ad65d784e896a https://www.encodeproject.org/files/ENCFF513REQ/@@download/ENCFF513REQ.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF325WUZ bed narrowPeak optimal idr thresholded peaks ENCSR735JCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KMT2B-human ENCAB445KMF DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF024ZDC, ENCFF142DIA, ENCFF693DIG 55935 ENCODE Processing Pipeline 48c381d122bd66adb692ae161d2f0a31 https://www.encodeproject.org/files/ENCFF325WUZ/@@download/ENCFF325WUZ.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, moderate library complexity, low read length, mild to moderate bottlenecking experiment not submitted to GEO insufficient read depth, partially characterized antibody ENCFF170VIW bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF132XOC, ENCFF587NFZ 6469689 ENCODE Processing Pipeline da1a2393510932d7e6a5e9280790a881 https://www.encodeproject.org/files/ENCFF170VIW/@@download/ENCFF170VIW.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF369MAB bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF124TQP, ENCFF587NFZ 6413409 ENCODE Processing Pipeline 3c8dc9701c59e3459d05d0c85a53f7e7 https://www.encodeproject.org/files/ENCFF369MAB/@@download/ENCFF369MAB.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF257RYT bed narrowPeak optimal idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF170VIW, ENCFF345KFF, ENCFF369MAB 270622 ENCODE Processing Pipeline 7e3090a199e6b19be857acc869c561a1 https://www.encodeproject.org/files/ENCFF257RYT/@@download/ENCFF257RYT.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF345KFF bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF124TQP, ENCFF132XOC, ENCFF587NFZ 7050591 ENCODE Processing Pipeline ff61621cea4897c161f8b69f2d4ea21c https://www.encodeproject.org/files/ENCFF345KFF/@@download/ENCFF345KFF.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF776UTN bed narrowPeak conservative idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF170VIW, ENCFF345KFF, ENCFF369MAB 230173 ENCODE Processing Pipeline d2dc072bac32b1a8a4b80447f779b60a https://www.encodeproject.org/files/ENCFF776UTN/@@download/ENCFF776UTN.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF007YKY bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF047IWR, ENCFF306LVM 6323536 ENCODE Processing Pipeline 0563937b862d4d53151640c42c9642a2 https://www.encodeproject.org/files/ENCFF007YKY/@@download/ENCFF007YKY.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF309OUB bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF047IWR, ENCFF306LVM, ENCFF662HRL 6991139 ENCODE Processing Pipeline dd167a1561914b9ac738499f1a691e10 https://www.encodeproject.org/files/ENCFF309OUB/@@download/ENCFF309OUB.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF171DGV bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF306LVM, ENCFF662HRL 6277653 ENCODE Processing Pipeline 3fd275633ca21c0831c422c18c969680 https://www.encodeproject.org/files/ENCFF171DGV/@@download/ENCFF171DGV.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF014VRD bed narrowPeak conservative idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF007YKY, ENCFF171DGV, ENCFF309OUB, ENCFF419RSJ 231998 ENCODE Processing Pipeline cbf6e087e8c23d649ea371e666b3fb07 https://www.encodeproject.org/files/ENCFF014VRD/@@download/ENCFF014VRD.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF436DME bed narrowPeak optimal idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF007YKY, ENCFF171DGV, ENCFF309OUB, ENCFF419RSJ 269263 ENCODE Processing Pipeline a24d0901a1740e0003b54864aabf5c15 https://www.encodeproject.org/files/ENCFF436DME/@@download/ENCFF436DME.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF065CJT bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF038IFQ, ENCFF316EBF 6100175 ENCODE Processing Pipeline b4ee13ebc7fd498c886ea2f21200813b https://www.encodeproject.org/files/ENCFF065CJT/@@download/ENCFF065CJT.bed.gz hg19 archived mismatched status ENCFF392SNI bed narrowPeak optimal idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF065CJT, ENCFF192SZH, ENCFF290CCX 136325 ENCODE Processing Pipeline fdef21ba8bc96ef1ebbe23d8354c5c2e https://www.encodeproject.org/files/ENCFF392SNI/@@download/ENCFF392SNI.bed.gz hg19 archived mismatched status ENCFF192SZH bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF290OJO, ENCFF316EBF 6150761 ENCODE Processing Pipeline 583b7b4b54bd4d096a3c63fddfed45b4 https://www.encodeproject.org/files/ENCFF192SZH/@@download/ENCFF192SZH.bed.gz hg19 archived mismatched status ENCFF573QWP bed narrowPeak conservative idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF065CJT, ENCFF192SZH, ENCFF290CCX 108436 ENCODE Processing Pipeline bc200fb04e318fb708268934b7c05668 https://www.encodeproject.org/files/ENCFF573QWP/@@download/ENCFF573QWP.bed.gz hg19 archived mismatched status ENCFF290CCX bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF038IFQ, ENCFF290OJO, ENCFF316EBF 6939527 ENCODE Processing Pipeline f0036795be13a0a2a5b78bcf4abd1f9b https://www.encodeproject.org/files/ENCFF290CCX/@@download/ENCFF290CCX.bed.gz hg19 archived mismatched status ENCFF545TVD bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF350IRK, ENCFF418SJR 5934728 ENCODE Processing Pipeline 1706a2abfd80b4a48d802143c4198221 https://www.encodeproject.org/files/ENCFF545TVD/@@download/ENCFF545TVD.bed.gz GRCh38 archived mismatched status ENCFF732KRW bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF303EFA, ENCFF350IRK 5994230 ENCODE Processing Pipeline 76ca0bf2779cee66b1486540556555cf https://www.encodeproject.org/files/ENCFF732KRW/@@download/ENCFF732KRW.bed.gz GRCh38 archived mismatched status ENCFF293SSA bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF303EFA, ENCFF350IRK, ENCFF418SJR 6824291 ENCODE Processing Pipeline cc77c4166299fbf5adaac8d4c38b4b3a https://www.encodeproject.org/files/ENCFF293SSA/@@download/ENCFF293SSA.bed.gz GRCh38 archived mismatched status ENCFF354MJU bed narrowPeak optimal idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF293SSA, ENCFF419RSJ, ENCFF545TVD, ENCFF732KRW 134047 ENCODE Processing Pipeline 96d6e6e0fd80c5d099b246965715c753 https://www.encodeproject.org/files/ENCFF354MJU/@@download/ENCFF354MJU.bed.gz GRCh38 archived mismatched status ENCFF967BIX bed narrowPeak conservative idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF293SSA, ENCFF419RSJ, ENCFF545TVD, ENCFF732KRW 108311 ENCODE Processing Pipeline 4bff0327337134790e061ba8a3a803f4 https://www.encodeproject.org/files/ENCFF967BIX/@@download/ENCFF967BIX.bed.gz GRCh38 archived mismatched status ENCFF002CEV bed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 217610 ENCODE Consortium Analysis Working Group a5df7c305af05ffe464e505e160dd1d5 https://www.encodeproject.org/files/ENCFF002CEV/@@download/ENCFF002CEV.bed.gz hg19 archived low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF325OIN bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF961HAZ 3774957 ENCODE Processing Pipeline 12bc331790d82cb9eb9a34b7cd820d8b https://www.encodeproject.org/files/ENCFF325OIN/@@download/ENCFF325OIN.bed.gz GRCh38 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF724JVF bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF416LJL, ENCFF961HAZ 5639671 ENCODE Processing Pipeline b9a89fc0247de9283709d7e89c87966e https://www.encodeproject.org/files/ENCFF724JVF/@@download/ENCFF724JVF.bed.gz GRCh38 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF103RHL bed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF325OIN, ENCFF419RSJ, ENCFF724JVF, ENCFF838VDJ 251066 ENCODE Processing Pipeline 5e36859e8973d66a657e5842fa816c16 https://www.encodeproject.org/files/ENCFF103RHL/@@download/ENCFF103RHL.bed.gz GRCh38 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF643AZY bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF187CGT, ENCFF245PJA 3780692 ENCODE Processing Pipeline 74b066a2b4a0716e0f843177511226d9 https://www.encodeproject.org/files/ENCFF643AZY/@@download/ENCFF643AZY.bed.gz hg19 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF235UDJ bed narrowPeak conservative idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF325OIN, ENCFF419RSJ, ENCFF724JVF, ENCFF838VDJ 150717 ENCODE Processing Pipeline 501e463fde4f64f1f89e74bf8339cfd9 https://www.encodeproject.org/files/ENCFF235UDJ/@@download/ENCFF235UDJ.bed.gz GRCh38 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF838VDJ bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF416LJL 4814033 ENCODE Processing Pipeline 20dc27e84a8a8cb1d14998b8fc895d47 https://www.encodeproject.org/files/ENCFF838VDJ/@@download/ENCFF838VDJ.bed.gz GRCh38 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF956WWZ bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF187CGT, ENCFF245PJA, ENCFF536GLO, ENCFF574XYY 5643911 ENCODE Processing Pipeline 0e16d8a8ab45ce013458b9a714cf8e58 https://www.encodeproject.org/files/ENCFF956WWZ/@@download/ENCFF956WWZ.bed.gz hg19 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF081GEA bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF536GLO, ENCFF574XYY 4808755 ENCODE Processing Pipeline 6f68aa14b9f8380db9f70eb8c31d042a https://www.encodeproject.org/files/ENCFF081GEA/@@download/ENCFF081GEA.bed.gz hg19 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF864EKR bed narrowPeak conservative idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF081GEA, ENCFF643AZY, ENCFF956WWZ 154360 ENCODE Processing Pipeline b2deae8cbb674788755593336acec2fb https://www.encodeproject.org/files/ENCFF864EKR/@@download/ENCFF864EKR.bed.gz hg19 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF718NUA bed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF081GEA, ENCFF643AZY, ENCFF956WWZ 249328 ENCODE Processing Pipeline 994d55aff4a2588ec824b795125a1166 https://www.encodeproject.org/files/ENCFF718NUA/@@download/ENCFF718NUA.bed.gz hg19 released low read depth, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF002CEN bed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 274053 ENCODE Consortium Analysis Working Group f5a3c9dd317402f9b15b3c8a2028839c https://www.encodeproject.org/files/ENCFF002CEN/@@download/ENCFF002CEN.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length missing derived_from, characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF445XTX bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF245PJA, ENCFF552DDV, ENCFF564MCX, ENCFF574XYY 6593091 ENCODE Processing Pipeline db83c687c4c3371f81aebb89beb9fc56 https://www.encodeproject.org/files/ENCFF445XTX/@@download/ENCFF445XTX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF624ZMB bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF564MCX 4089103 ENCODE Processing Pipeline ea82d4eed548e69a4de334be39dbb6d8 https://www.encodeproject.org/files/ENCFF624ZMB/@@download/ENCFF624ZMB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF451XDT bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF619AJU, ENCFF698XSR 6593181 ENCODE Processing Pipeline e9e8547d11621019dfdd58c4b2caad82 https://www.encodeproject.org/files/ENCFF451XDT/@@download/ENCFF451XDT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF200WFO bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF245PJA, ENCFF552DDV, ENCFF574XYY 6262092 ENCODE Processing Pipeline 584d30694373b6331099acf9088ef033 https://www.encodeproject.org/files/ENCFF200WFO/@@download/ENCFF200WFO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF957IOZ bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF698XSR 6230662 ENCODE Processing Pipeline eb2d48e264637a5ff56086279676d4d2 https://www.encodeproject.org/files/ENCFF957IOZ/@@download/ENCFF957IOZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF186FPQ bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF619AJU 4086222 ENCODE Processing Pipeline 0fc4c6ace37489f3bb0a1d61c5be4a3e https://www.encodeproject.org/files/ENCFF186FPQ/@@download/ENCFF186FPQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF130EPK bed narrowPeak conservative idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF200WFO, ENCFF445XTX, ENCFF624ZMB 126972 ENCODE Processing Pipeline 9ce02ac022cf18c0759adbb97ecdec78 https://www.encodeproject.org/files/ENCFF130EPK/@@download/ENCFF130EPK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF357NRL bed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF200WFO, ENCFF445XTX, ENCFF624ZMB 306918 ENCODE Processing Pipeline 4beb039261783c24cc5bb12c501a81ac https://www.encodeproject.org/files/ENCFF357NRL/@@download/ENCFF357NRL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF016MVN bed narrowPeak conservative idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF186FPQ, ENCFF419RSJ, ENCFF451XDT, ENCFF957IOZ 128478 ENCODE Processing Pipeline f23bd1199cbf0d0723eea11d5a0d0e1a https://www.encodeproject.org/files/ENCFF016MVN/@@download/ENCFF016MVN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF557WXK bed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF186FPQ, ENCFF419RSJ, ENCFF451XDT, ENCFF957IOZ 306909 ENCODE Processing Pipeline 2fd127e707de89023dde25732e1cf762 https://www.encodeproject.org/files/ENCFF557WXK/@@download/ENCFF557WXK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length characterization(s) pending review, biological replicates with identical biosample insufficient replicate concordance ENCFF001VLX bed narrowPeak peaks ENCSR000DNZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 834029 Kevin Struhl, HMS 95c2925ddbe06732dab3375c07d57fd0 https://www.encodeproject.org/files/ENCFF001VLX/@@download/ENCFF001VLX.bed.gz hg19 released low read length missing derived_from, biological replicates with identical biosample ENCFF002CVM bed narrowPeak optimal idr thresholded peaks ENCSR000DNZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 373491 ENCODE Consortium Analysis Working Group 225df5bb216e466ac39f799e1eaa6e61 https://www.encodeproject.org/files/ENCFF002CVM/@@download/ENCFF002CVM.bed.gz hg19 released low read length missing derived_from, biological replicates with identical biosample ENCFF617KCZ bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF207NLX 5841840 ENCODE Processing Pipeline 1b3caa2049a8b1d6339b5104dd2e9826 https://www.encodeproject.org/files/ENCFF617KCZ/@@download/ENCFF617KCZ.bed.gz GRCh38 released moderate library complexity, low read depth ENCFF161WZP bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF564KCD 5869046 ENCODE Processing Pipeline d86dd6901457021f3560e99080d887d1 https://www.encodeproject.org/files/ENCFF161WZP/@@download/ENCFF161WZP.bed.gz GRCh38 released moderate library complexity, low read depth ENCFF636TZL bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF207NLX, ENCFF564KCD 6373780 ENCODE Processing Pipeline 1509ce7c1c429fd1c7d7ff51e19b94d4 https://www.encodeproject.org/files/ENCFF636TZL/@@download/ENCFF636TZL.bed.gz GRCh38 released moderate library complexity, low read depth ENCFF626VDA bed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF161WZP, ENCFF419RSJ, ENCFF617KCZ, ENCFF636TZL 376439 ENCODE Processing Pipeline 073ab3f58f304ec82215a5ecfcb383b8 https://www.encodeproject.org/files/ENCFF626VDA/@@download/ENCFF626VDA.bed.gz GRCh38 released moderate library complexity, low read depth ENCFF606MZK bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862RTJ 5843860 ENCODE Processing Pipeline 951c843562da6d636f7e4f4647195342 https://www.encodeproject.org/files/ENCFF606MZK/@@download/ENCFF606MZK.bed.gz hg19 released moderate library complexity, low read depth ENCFF144PPR bed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF001TDO, ENCFF559ITE, ENCFF606MZK, ENCFF892HJT 370811 ENCODE Processing Pipeline ed341ef382b1729a4467c26b9d7afc00 https://www.encodeproject.org/files/ENCFF144PPR/@@download/ENCFF144PPR.bed.gz hg19 released moderate library complexity, low read depth mismatched status ENCFF892HJT bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ 5874459 ENCODE Processing Pipeline f7b54c7101852b2eae0e6453528c8cd5 https://www.encodeproject.org/files/ENCFF892HJT/@@download/ENCFF892HJT.bed.gz hg19 released moderate library complexity, low read depth ENCFF559ITE bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ, ENCFF862RTJ 6386406 ENCODE Processing Pipeline 1bc4bd7836fca6a87e852936ce357253 https://www.encodeproject.org/files/ENCFF559ITE/@@download/ENCFF559ITE.bed.gz hg19 released moderate library complexity, low read depth ENCFF804AYO bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF139VKC, ENCFF968SMN 6110096 ENCODE Processing Pipeline 5794fc2a4328b650b1c513b414fb8761 https://www.encodeproject.org/files/ENCFF804AYO/@@download/ENCFF804AYO.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched file status poor library complexity, severe bottlenecking ENCFF331IWR bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF139VKC, ENCFF746MMS 6433989 ENCODE Processing Pipeline 8b87c22a1102272fd3558db70746d291 https://www.encodeproject.org/files/ENCFF331IWR/@@download/ENCFF331IWR.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched file status poor library complexity, severe bottlenecking ENCFF392QMP bed narrowPeak conservative idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF331IWR, ENCFF804AYO, ENCFF982UOO 19756 ENCODE Processing Pipeline 1432f04cc5fa7a467c568fc0ad045570 https://www.encodeproject.org/files/ENCFF392QMP/@@download/ENCFF392QMP.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched file status poor library complexity, severe bottlenecking ENCFF772HOY bed narrowPeak optimal idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF331IWR, ENCFF804AYO, ENCFF982UOO 34602 ENCODE Processing Pipeline 8faf266dc68894e370a91f3389c162da https://www.encodeproject.org/files/ENCFF772HOY/@@download/ENCFF772HOY.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched file status poor library complexity, severe bottlenecking ENCFF982UOO bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF139VKC, ENCFF746MMS, ENCFF968SMN 6975338 ENCODE Processing Pipeline 859b1874edcfbdb6ff6c90c8071fb9af https://www.encodeproject.org/files/ENCFF982UOO/@@download/ENCFF982UOO.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched file status poor library complexity, severe bottlenecking ENCFF333QUP bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF535SSL 6277205 ENCODE Processing Pipeline 9d57ae2cdd0ee53fc4a015fbbf33fe7a https://www.encodeproject.org/files/ENCFF333QUP/@@download/ENCFF333QUP.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched file status poor library complexity, severe bottlenecking ENCFF687OMH bed narrowPeak optimal idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF333QUP, ENCFF419RSJ, ENCFF515APP, ENCFF834LHN 33536 ENCODE Processing Pipeline 17227c49db14dbcd7b6f29f75d53c412 https://www.encodeproject.org/files/ENCFF687OMH/@@download/ENCFF687OMH.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched status, mismatched file status poor library complexity, severe bottlenecking ENCFF834LHN bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF535SSL, ENCFF950PAH 6886626 ENCODE Processing Pipeline 18c33709ae53bc4ecbbec3d6cc8406b7 https://www.encodeproject.org/files/ENCFF834LHN/@@download/ENCFF834LHN.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched file status poor library complexity, severe bottlenecking ENCFF149PSG bed narrowPeak conservative idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF333QUP, ENCFF419RSJ, ENCFF515APP, ENCFF834LHN 19600 ENCODE Processing Pipeline 875ae09e10e568aae0e80addbff2915e https://www.encodeproject.org/files/ENCFF149PSG/@@download/ENCFF149PSG.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO, missing unfiltered alignments, mismatched status, mismatched file status poor library complexity, severe bottlenecking ENCFF627BPL bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF061ITH, ENCFF248TDS 5814015 ENCODE Processing Pipeline 8c7679a34fda59f121cf043aaec21874 https://www.encodeproject.org/files/ENCFF627BPL/@@download/ENCFF627BPL.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF771POP bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF061ITH, ENCFF612OEV 5393271 ENCODE Processing Pipeline 3d5ccbf5d23405626938d5298e2ab55d https://www.encodeproject.org/files/ENCFF771POP/@@download/ENCFF771POP.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF197SSW bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF061ITH, ENCFF248TDS, ENCFF612OEV 6618308 ENCODE Processing Pipeline b541c750fffb322010bdc55c943f7fd6 https://www.encodeproject.org/files/ENCFF197SSW/@@download/ENCFF197SSW.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF036WLT bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF027QPB, ENCFF697TDR 6487631 ENCODE Processing Pipeline 6a9877e4e7402be4b22d943ea78e1bcb https://www.encodeproject.org/files/ENCFF036WLT/@@download/ENCFF036WLT.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF965PAJ bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF697TDR 5624139 ENCODE Processing Pipeline 596a06b3d80c2db7283c68849a1f18d2 https://www.encodeproject.org/files/ENCFF965PAJ/@@download/ENCFF965PAJ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF618AYC bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF027QPB 5214328 ENCODE Processing Pipeline 2f31d75de475baa141c1f14b50defc92 https://www.encodeproject.org/files/ENCFF618AYC/@@download/ENCFF618AYC.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF671YEU bed narrowPeak conservative idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF036WLT, ENCFF419RSJ, ENCFF618AYC, ENCFF965PAJ 92544 ENCODE Processing Pipeline 74c3e5e5af4dc07e2646029ddfea9492 https://www.encodeproject.org/files/ENCFF671YEU/@@download/ENCFF671YEU.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF462UJN bed narrowPeak optimal idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF036WLT, ENCFF419RSJ, ENCFF618AYC, ENCFF965PAJ 134560 ENCODE Processing Pipeline 0957a51663a33df2a2c21557e67817b1 https://www.encodeproject.org/files/ENCFF462UJN/@@download/ENCFF462UJN.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF175IUO bed narrowPeak optimal idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF197SSW, ENCFF627BPL, ENCFF771POP 115143 ENCODE Processing Pipeline 1da9412addcc8fdacab4a65d0a9098ce https://www.encodeproject.org/files/ENCFF175IUO/@@download/ENCFF175IUO.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF625IYZ bed narrowPeak conservative idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF197SSW, ENCFF627BPL, ENCFF771POP 80810 ENCODE Processing Pipeline 1c6ae16b5a084d64eaf41776e98d524f https://www.encodeproject.org/files/ENCFF625IYZ/@@download/ENCFF625IYZ.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF001VNI bed narrowPeak peaks ENCSR000DOB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 709237 Kevin Struhl, HMS fca4dfee5f42fcc3e629200d9523a39c https://www.encodeproject.org/files/ENCFF001VNI/@@download/ENCFF001VNI.bed.gz hg19 released mixed read lengths, low read length missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CWT bed narrowPeak optimal idr thresholded peaks ENCSR000DOB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 320736 ENCODE Consortium Analysis Working Group 9784935821cde1c75e773aba4c415e7d https://www.encodeproject.org/files/ENCFF002CWT/@@download/ENCFF002CWT.bed.gz hg19 released mixed read lengths, low read length missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001VND bed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 173891 Michael Snyder, Stanford 6a07da1b0c8bc539abe32ca5078768e6 https://www.encodeproject.org/files/ENCFF001VND/@@download/ENCFF001VND.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF001VNF bed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 194296 Kevin Struhl, HMS 30cdabd6bbf43b482c8459b675f20ebe https://www.encodeproject.org/files/ENCFF001VNF/@@download/ENCFF001VNF.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CWR bed narrowPeak optimal idr thresholded peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 72817 ENCODE Consortium Analysis Working Group 75b9839093fea57946dadfdef9ed7efd https://www.encodeproject.org/files/ENCFF002CWR/@@download/ENCFF002CWR.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF294TKX bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF473NMO 6352302 ENCODE Processing Pipeline 851854e5e9bb7bc05487becd854a6b2c https://www.encodeproject.org/files/ENCFF294TKX/@@download/ENCFF294TKX.bed.gz GRCh38 released antibody characterized with exemption, low read depth mismatched file status ENCFF602FXU bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF363YKW, ENCFF473NMO 6784191 ENCODE Processing Pipeline d65fbbf671a3926934d8d08cf7107f5a https://www.encodeproject.org/files/ENCFF602FXU/@@download/ENCFF602FXU.bed.gz GRCh38 released antibody characterized with exemption, low read depth mismatched file status ENCFF675MHT bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF363YKW 5863045 ENCODE Processing Pipeline 3f4ef3f530fc925a034c676165edf98c https://www.encodeproject.org/files/ENCFF675MHT/@@download/ENCFF675MHT.bed.gz GRCh38 released antibody characterized with exemption, low read depth mismatched file status ENCFF159OAX bed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF294TKX, ENCFF419RSJ, ENCFF602FXU, ENCFF675MHT 634458 ENCODE Processing Pipeline 5704bd78e270ce39640de3e4936a4be4 https://www.encodeproject.org/files/ENCFF159OAX/@@download/ENCFF159OAX.bed.gz GRCh38 released antibody characterized with exemption, low read depth mismatched file status ENCFF021XJN bed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF294TKX, ENCFF419RSJ, ENCFF602FXU, ENCFF675MHT 663445 ENCODE Processing Pipeline 2cc7dab80c84f9a442997a58288842c1 https://www.encodeproject.org/files/ENCFF021XJN/@@download/ENCFF021XJN.bed.gz GRCh38 released antibody characterized with exemption, low read depth mismatched file status ENCFF045SMN bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF131HAH 6212068 ENCODE Processing Pipeline 4d303f0bcffe18274deecf13520dfd59 https://www.encodeproject.org/files/ENCFF045SMN/@@download/ENCFF045SMN.bed.gz hg19 released antibody characterized with exemption, low read depth mismatched file status ENCFF357OAA bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ 5760292 ENCODE Processing Pipeline 57cd23fbb6807ef1926017cdddb8efac https://www.encodeproject.org/files/ENCFF357OAA/@@download/ENCFF357OAA.bed.gz hg19 released antibody characterized with exemption, low read depth mismatched file status ENCFF477IXW bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ, ENCFF131HAH 6680945 ENCODE Processing Pipeline f5b14472ec98f963c35d668b3636b252 https://www.encodeproject.org/files/ENCFF477IXW/@@download/ENCFF477IXW.bed.gz hg19 released antibody characterized with exemption, low read depth mismatched file status ENCFF744NXL bed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF045SMN, ENCFF357OAA, ENCFF477IXW 604775 ENCODE Processing Pipeline ca800c0284be134f57aaacdd0316c355 https://www.encodeproject.org/files/ENCFF744NXL/@@download/ENCFF744NXL.bed.gz hg19 released antibody characterized with exemption, low read depth mismatched file status ENCFF948TXN bed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF045SMN, ENCFF357OAA, ENCFF477IXW 627991 ENCODE Processing Pipeline faf8f9d6ef509ef17dd410cd21d30238 https://www.encodeproject.org/files/ENCFF948TXN/@@download/ENCFF948TXN.bed.gz hg19 released antibody characterized with exemption, low read depth mismatched file status ENCFF001UTC bed narrowPeak peaks ENCSR000DLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 687895 Vishwanath Iyer, UTA 286efa162c05702c48d2945e6062b946 https://www.encodeproject.org/files/ENCFF001UTC/@@download/ENCFF001UTC.bed.gz hg19 archived moderate library complexity, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002DBC bed narrowPeak optimal idr thresholded peaks ENCSR000DLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 296247 ENCODE Consortium Analysis Working Group de830fcb2f6b0e36e7dccfd232d3ae48 https://www.encodeproject.org/files/ENCFF002DBC/@@download/ENCFF002DBC.bed.gz hg19 archived moderate library complexity, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF646YVH bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF103HTZ 7249249 ENCODE Processing Pipeline 87221ddd88053e98de0b5f627f627d77 https://www.encodeproject.org/files/ENCFF646YVH/@@download/ENCFF646YVH.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF744SVC bed narrowPeak optimal idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF225EQY, ENCFF228ORA, ENCFF849XOM 92239 ENCODE Processing Pipeline 640dd68dc008f1df30cb7d6f32a82845 https://www.encodeproject.org/files/ENCFF744SVC/@@download/ENCFF744SVC.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF504AID bed narrowPeak conservative idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF225EQY, ENCFF228ORA, ENCFF849XOM 80776 ENCODE Processing Pipeline 06150697ff256e24616c22ace6080e0d https://www.encodeproject.org/files/ENCFF504AID/@@download/ENCFF504AID.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF849XOM bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF127KUO, ENCFF432JII 7306581 ENCODE Processing Pipeline 569991f0b6311ded2e5751c48f9e24e0 https://www.encodeproject.org/files/ENCFF849XOM/@@download/ENCFF849XOM.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF228ORA bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF040FFN, ENCFF127KUO, ENCFF432JII 7276095 ENCODE Processing Pipeline e9a5cd3ba5431dec031b1956d48404f2 https://www.encodeproject.org/files/ENCFF228ORA/@@download/ENCFF228ORA.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF225EQY bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF040FFN, ENCFF127KUO 7241061 ENCODE Processing Pipeline a13201e6f9f9a88ae3150af208eea6db https://www.encodeproject.org/files/ENCFF225EQY/@@download/ENCFF225EQY.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF905NQR bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF864BUV 7316576 ENCODE Processing Pipeline 0c5980adb2664940d4da4140420602a5 https://www.encodeproject.org/files/ENCFF905NQR/@@download/ENCFF905NQR.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF386PEX bed narrowPeak conservative idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF331MJT, ENCFF419RSJ, ENCFF646YVH, ENCFF905NQR 79330 ENCODE Processing Pipeline e11b911b035ef368ed2d939aa3b6b14d https://www.encodeproject.org/files/ENCFF386PEX/@@download/ENCFF386PEX.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF533OBT bed narrowPeak optimal idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF331MJT, ENCFF419RSJ, ENCFF646YVH, ENCFF905NQR 91678 ENCODE Processing Pipeline 8a565b68c91fb99cf36e3acb754ad3aa https://www.encodeproject.org/files/ENCFF533OBT/@@download/ENCFF533OBT.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF331MJT bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF103HTZ, ENCFF864BUV 7290175 ENCODE Processing Pipeline 954d46afd3cbc0739764473c2550cb60 https://www.encodeproject.org/files/ENCFF331MJT/@@download/ENCFF331MJT.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF001VOI bed narrowPeak peaks ENCSR000FAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 278310 Sherman Weissman, Yale 41d68a9c6796b020e88d2adcf9be1ba3 https://www.encodeproject.org/files/ENCFF001VOI/@@download/ENCFF001VOI.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CXR bed narrowPeak optimal idr thresholded peaks ENCSR000FAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 372941 ENCODE Consortium Analysis Working Group c05fd64032c0e77d1958bafa8ecad68b https://www.encodeproject.org/files/ENCFF002CXR/@@download/ENCFF002CXR.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001XGM bed narrowPeak peaks ENCSR000DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-11 ENCODE 1 ENCFF001FVU 18386 John Stamatoyannopoulos, UW 548c7a733ac18e9b716b351d1868f127 https://www.encodeproject.org/files/ENCFF001XGM/@@download/ENCFF001XGM.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient read depth, severe bottlenecking extremely low read depth ENCFF001XGN bed narrowPeak peaks ENCSR000DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-11 ENCODE 2 ENCFF001FVZ 5239 John Stamatoyannopoulos, UW a56bf1a06307c81af8596f8eb43f684b https://www.encodeproject.org/files/ENCFF001XGN/@@download/ENCFF001XGN.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient read depth, severe bottlenecking extremely low read depth ENCFF431UNO bed narrowPeak peaks ENCSR000DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-11 ENCODE 2 ENCFF094FCX, ENCFF465CVS 3459068 ENCODE Processing Pipeline ff7783a78140dd6e44c594f6371f4bf5 https://www.encodeproject.org/files/ENCFF431UNO/@@download/ENCFF431UNO.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient read depth, severe bottlenecking extremely low read depth ENCFF360DMN bed narrowPeak peaks ENCSR000DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-11 ENCODE 1 ENCFF393YZO, ENCFF465CVS 3779730 ENCODE Processing Pipeline 5f6a1cb15c572100abdfc386e12a32e4 https://www.encodeproject.org/files/ENCFF360DMN/@@download/ENCFF360DMN.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient read depth, severe bottlenecking extremely low read depth ENCFF252XGD bed narrowPeak peaks ENCSR000DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-11 ENCODE 1, 2 ENCFF094FCX, ENCFF393YZO, ENCFF465CVS 2763410 ENCODE Processing Pipeline 9baeffb03d5af92b549ab699d1b8ba98 https://www.encodeproject.org/files/ENCFF252XGD/@@download/ENCFF252XGD.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient read depth, severe bottlenecking extremely low read depth ENCFF482VSO bed narrowPeak replicated peaks ENCSR000DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-11 ENCODE 1, 2 ENCFF252XGD, ENCFF360DMN, ENCFF431UNO 1088762 ENCODE Processing Pipeline 4093418ded39e35b0effb4cf2f572a14 https://www.encodeproject.org/files/ENCFF482VSO/@@download/ENCFF482VSO.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient read depth, severe bottlenecking extremely low read depth ENCFF001UWN bed narrowPeak peaks ENCSR000EKP DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens G2 DNA see document see document False 2012-08-28 ENCODE 1758908 Gregory Crawford, Duke e19ba77761cad0973cd2c8cd9a48e021 https://www.encodeproject.org/files/ENCFF001UWN/@@download/ENCFF001UWN.bed.gz hg19 released mixed read lengths missing derived_from, mismatched file status, biological replicates with identical biosample insufficient spot score extremely low spot score ENCFF001VMD bed narrowPeak peaks ENCSR000DOC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 664 Kevin Struhl, HMS 4932aa8b0f3f34a2c5fe3decb67eb76f https://www.encodeproject.org/files/ENCFF001VMD/@@download/ENCFF001VMD.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CVS bed narrowPeak optimal idr thresholded peaks ENCSR000DOC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 29151 ENCODE Consortium Analysis Working Group f075234fcb2722a9724e3854f969ff0b https://www.encodeproject.org/files/ENCFF002CVS/@@download/ENCFF002CVS.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001VMS bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 746853 Michael Snyder, Stanford a578f5369f477f5344dcab4b71263c6b https://www.encodeproject.org/files/ENCFF001VMS/@@download/ENCFF001VMS.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF002CWF bed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 680076 ENCODE Consortium Analysis Working Group 97fdb036134d390f6ab03921b34aaffe https://www.encodeproject.org/files/ENCFF002CWF/@@download/ENCFF002CWF.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF838NIW bed narrowPeak conservative idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF017FSY, ENCFF208AQB, ENCFF233XAJ, ENCFF419RSJ 475230 ENCODE Processing Pipeline 0992be8bd52a2579a88603345856d39e https://www.encodeproject.org/files/ENCFF838NIW/@@download/ENCFF838NIW.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF605WXD bed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF017FSY, ENCFF208AQB, ENCFF233XAJ, ENCFF419RSJ 653860 ENCODE Processing Pipeline 2650cfd5835a8475a07ff6d8c27ed722 https://www.encodeproject.org/files/ENCFF605WXD/@@download/ENCFF605WXD.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF208AQB bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF239WGU 4216435 ENCODE Processing Pipeline 0c9221e75e6e0dea22f90ce9b71c0f1d https://www.encodeproject.org/files/ENCFF208AQB/@@download/ENCFF208AQB.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF017FSY bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF836IMK 5174718 ENCODE Processing Pipeline 2d207f4129d811671fae0cb3bed472a3 https://www.encodeproject.org/files/ENCFF017FSY/@@download/ENCFF017FSY.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF233XAJ bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF239WGU, ENCFF836IMK 5448557 ENCODE Processing Pipeline e11f25c8c3f6dfba4dc21c10390ea330 https://www.encodeproject.org/files/ENCFF233XAJ/@@download/ENCFF233XAJ.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF199SKV bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF309ANN, ENCFF632LZV 5455388 ENCODE Processing Pipeline 9c12aa3979b8f0bddc5305ce0e8450b8 https://www.encodeproject.org/files/ENCFF199SKV/@@download/ENCFF199SKV.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF859MQB bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF632LZV 5152875 ENCODE Processing Pipeline 71baec99e51af3ddd25dbb5560627e68 https://www.encodeproject.org/files/ENCFF859MQB/@@download/ENCFF859MQB.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF884VNW bed narrowPeak conservative idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF199SKV, ENCFF357NBU, ENCFF859MQB 476665 ENCODE Processing Pipeline e800acc223086c11337a341f66ad6dc5 https://www.encodeproject.org/files/ENCFF884VNW/@@download/ENCFF884VNW.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF357NBU bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF309ANN 4223795 ENCODE Processing Pipeline 69a2a9af103dd227176648e42edaee29 https://www.encodeproject.org/files/ENCFF357NBU/@@download/ENCFF357NBU.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF676YJE bed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF199SKV, ENCFF357NBU, ENCFF859MQB 636144 ENCODE Processing Pipeline ffdaabb82feb7296592767b1c23b26fa https://www.encodeproject.org/files/ENCFF676YJE/@@download/ENCFF676YJE.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF328JKG bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF678WSG, ENCFF847WWC 5957104 ENCODE Processing Pipeline 6e62a8695452b07cd3c97d0583220ac3 https://www.encodeproject.org/files/ENCFF328JKG/@@download/ENCFF328JKG.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF313HJO bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF252BPD, ENCFF847WWC 6066355 ENCODE Processing Pipeline b487f0b2226a0251fa87c44d3d0f3897 https://www.encodeproject.org/files/ENCFF313HJO/@@download/ENCFF313HJO.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF572YZB bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF252BPD, ENCFF678WSG, ENCFF847WWC 6832331 ENCODE Processing Pipeline b91e0ce07796c45372e0303da36a545c https://www.encodeproject.org/files/ENCFF572YZB/@@download/ENCFF572YZB.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF476ZIX bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF209VFR, ENCFF294DBF 5883211 ENCODE Processing Pipeline 556c9fe28f60cfafcaf6a2934f3f2214 https://www.encodeproject.org/files/ENCFF476ZIX/@@download/ENCFF476ZIX.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF573MKN bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF209VFR, ENCFF334OKF 5825591 ENCODE Processing Pipeline 62ef11a776d3ce2b61131cec29d8b8c8 https://www.encodeproject.org/files/ENCFF573MKN/@@download/ENCFF573MKN.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF701RAG bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF209VFR, ENCFF294DBF, ENCFF334OKF 6726452 ENCODE Processing Pipeline e75f061f4ef3bea7ab864fe840f8b560 https://www.encodeproject.org/files/ENCFF701RAG/@@download/ENCFF701RAG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF027GDP bed narrowPeak conservative idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF476ZIX, ENCFF573MKN, ENCFF701RAG 192313 ENCODE Processing Pipeline 688bc3aff832e80b446a12a5a10f6fb2 https://www.encodeproject.org/files/ENCFF027GDP/@@download/ENCFF027GDP.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF606EUI bed narrowPeak optimal idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF476ZIX, ENCFF573MKN, ENCFF701RAG 274057 ENCODE Processing Pipeline 6995dcc0acd4f25451c7ad5ca83be19e https://www.encodeproject.org/files/ENCFF606EUI/@@download/ENCFF606EUI.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF459GME bed narrowPeak conservative idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF313HJO, ENCFF328JKG, ENCFF572YZB 156638 ENCODE Processing Pipeline ece1d1bd0ea684a057482ba82dad6e56 https://www.encodeproject.org/files/ENCFF459GME/@@download/ENCFF459GME.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF665FHC bed narrowPeak optimal idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF313HJO, ENCFF328JKG, ENCFF572YZB 215831 ENCODE Processing Pipeline 13b3ccebe630aa070e48ffa45ad69399 https://www.encodeproject.org/files/ENCFF665FHC/@@download/ENCFF665FHC.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF317YJY bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF194ZKK, ENCFF946QHS 6910926 ENCODE Processing Pipeline bc842742eea8b78ce621aa042251e9e5 https://www.encodeproject.org/files/ENCFF317YJY/@@download/ENCFF317YJY.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF090MIJ bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF194ZKK, ENCFF926NTQ 6779574 ENCODE Processing Pipeline 76f18f74c6f5c1d498ea8e93cac8bd80 https://www.encodeproject.org/files/ENCFF090MIJ/@@download/ENCFF090MIJ.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF319MZU bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF194ZKK, ENCFF926NTQ, ENCFF946QHS 7277111 ENCODE Processing Pipeline f2fde630471c906bf9bf9899216f9439 https://www.encodeproject.org/files/ENCFF319MZU/@@download/ENCFF319MZU.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF837QOK bed narrowPeak conservative idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF090MIJ, ENCFF317YJY, ENCFF319MZU 285691 ENCODE Processing Pipeline b30e85edba612b39d8afdc6536d78f53 https://www.encodeproject.org/files/ENCFF837QOK/@@download/ENCFF837QOK.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF859NPS bed narrowPeak optimal idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF090MIJ, ENCFF317YJY, ENCFF319MZU 384718 ENCODE Processing Pipeline 1fbe7c256ff4719ad463455c1b853fa6 https://www.encodeproject.org/files/ENCFF859NPS/@@download/ENCFF859NPS.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF299KOW bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF908PSF 6688176 ENCODE Processing Pipeline f676b20ce412da6e8b9e340d7f53da69 https://www.encodeproject.org/files/ENCFF299KOW/@@download/ENCFF299KOW.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF690WII bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF786GEU 6814944 ENCODE Processing Pipeline 5e99e3c6e54adee64d4b1d570f283d5b https://www.encodeproject.org/files/ENCFF690WII/@@download/ENCFF690WII.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF475VMR bed narrowPeak optimal idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF299KOW, ENCFF419RSJ, ENCFF690WII, ENCFF818TCS 393206 ENCODE Processing Pipeline ea26658f9dc7224f020f0594840f0d6a https://www.encodeproject.org/files/ENCFF475VMR/@@download/ENCFF475VMR.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF818TCS bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF786GEU, ENCFF908PSF 7260754 ENCODE Processing Pipeline 78a49cabbf12a3cdecb106003614425f https://www.encodeproject.org/files/ENCFF818TCS/@@download/ENCFF818TCS.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF783GDC bed narrowPeak conservative idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF299KOW, ENCFF419RSJ, ENCFF690WII, ENCFF818TCS 287867 ENCODE Processing Pipeline 04572d458b9c94a27d85d0324a0280b3 https://www.encodeproject.org/files/ENCFF783GDC/@@download/ENCFF783GDC.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF001VPI bed narrowPeak peaks ENCSR000FAC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens XRCC4-human ENCAB000AMK DNA see document see document False 2011-10-29 ENCODE 536 Sherman Weissman, Yale 53b582d7e33cebdad006cc70b1648caf https://www.encodeproject.org/files/ENCFF001VPI/@@download/ENCFF001VPI.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001VMA bed narrowPeak peaks ENCSR000DOK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 8976 Kevin Struhl, HMS 77ddebdfd55e26dbf3ad35aa4d74749f https://www.encodeproject.org/files/ENCFF001VMA/@@download/ENCFF001VMA.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CVP bed narrowPeak optimal idr thresholded peaks ENCSR000DOK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 14731 ENCODE Consortium Analysis Working Group b7736965c422593b231caef94ba62e82 https://www.encodeproject.org/files/ENCFF002CVP/@@download/ENCFF002CVP.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001VMF bed narrowPeak peaks ENCSR000DOA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 839229 Kevin Struhl, HMS 2c31d012aa97330d5e1b6cf2f24ebd8b https://www.encodeproject.org/files/ENCFF001VMF/@@download/ENCFF001VMF.bed.gz hg19 released mixed read lengths, low read length missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CVU bed narrowPeak optimal idr thresholded peaks ENCSR000DOA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 478673 ENCODE Consortium Analysis Working Group 32c2e57570701d01ddb5dfa07e83b726 https://www.encodeproject.org/files/ENCFF002CVU/@@download/ENCFF002CVU.bed.gz hg19 released mixed read lengths, low read length missing derived_from, biological replicates with identical biosample insufficient read length ENCFF990SRA bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF888AOR 6419371 ENCODE Processing Pipeline 0ee4136d06a2513eae8bbc68898ee1cd https://www.encodeproject.org/files/ENCFF990SRA/@@download/ENCFF990SRA.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF670HFC bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF382DBE, ENCFF888AOR 7098085 ENCODE Processing Pipeline ec9952c78441f3ac198de9908e8b0d8c https://www.encodeproject.org/files/ENCFF670HFC/@@download/ENCFF670HFC.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF046QEQ bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF382DBE 6126018 ENCODE Processing Pipeline 544d72f381ce8441b5d3b265945b2c96 https://www.encodeproject.org/files/ENCFF046QEQ/@@download/ENCFF046QEQ.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF191MYC bed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF046QEQ, ENCFF419RSJ, ENCFF670HFC, ENCFF990SRA 176306 ENCODE Processing Pipeline 221dcf358f7454630cd40eb494850607 https://www.encodeproject.org/files/ENCFF191MYC/@@download/ENCFF191MYC.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF163FLA bed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF046QEQ, ENCFF419RSJ, ENCFF670HFC, ENCFF990SRA 275708 ENCODE Processing Pipeline c62dfebc3a00c7cd0535bd47ec04a154 https://www.encodeproject.org/files/ENCFF163FLA/@@download/ENCFF163FLA.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF484DKT bed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF001TDO, ENCFF135TJX, ENCFF491AYX, ENCFF908UOT 257946 ENCODE Processing Pipeline 4ef8751c301c235ed067836ca888b02b https://www.encodeproject.org/files/ENCFF484DKT/@@download/ENCFF484DKT.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF135TJX bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF061QOJ, ENCFF798GLN 6448558 ENCODE Processing Pipeline fe994e22e5535e903c5d1b003e19c321 https://www.encodeproject.org/files/ENCFF135TJX/@@download/ENCFF135TJX.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF908UOT bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF061QOJ, ENCFF227XXD, ENCFF476EGJ, ENCFF798GLN 7071954 ENCODE Processing Pipeline f23079c4c92c24d44c132d688663e3f5 https://www.encodeproject.org/files/ENCFF908UOT/@@download/ENCFF908UOT.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF491AYX bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF227XXD, ENCFF476EGJ 6115452 ENCODE Processing Pipeline dda65365ecde455a4549c284db4677e3 https://www.encodeproject.org/files/ENCFF491AYX/@@download/ENCFF491AYX.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF740VTJ bed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF001TDO, ENCFF135TJX, ENCFF491AYX, ENCFF908UOT 165903 ENCODE Processing Pipeline 55a46c61ae40dbfeefbf981ed442e630 https://www.encodeproject.org/files/ENCFF740VTJ/@@download/ENCFF740VTJ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF207HZD bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF234PKC, ENCFF985LZI 5649743 ENCODE Processing Pipeline 0555764c4566ad7d32c7afc448d29081 https://www.encodeproject.org/files/ENCFF207HZD/@@download/ENCFF207HZD.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF237JZC bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF676IGA, ENCFF985LZI 6000653 ENCODE Processing Pipeline f7838b40ca9c0c92219e84adafab3aea https://www.encodeproject.org/files/ENCFF237JZC/@@download/ENCFF237JZC.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF847LIB bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF234PKC, ENCFF676IGA, ENCFF985LZI 6916136 ENCODE Processing Pipeline d052289690e58a3e229ff0818d4dd73f https://www.encodeproject.org/files/ENCFF847LIB/@@download/ENCFF847LIB.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF815TNI bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF073AHU, ENCFF145ZDW 5828660 ENCODE Processing Pipeline 8628529ccd9cd40f8b96c13392a4280e https://www.encodeproject.org/files/ENCFF815TNI/@@download/ENCFF815TNI.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF710PCL bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF073AHU, ENCFF831ODM 5444826 ENCODE Processing Pipeline cd76b7fcb1b066a9e83fed26e74e1c12 https://www.encodeproject.org/files/ENCFF710PCL/@@download/ENCFF710PCL.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF965NQP bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF073AHU, ENCFF145ZDW, ENCFF831ODM 6821495 ENCODE Processing Pipeline e9d4990980cff212b3b411ac10fbea3e https://www.encodeproject.org/files/ENCFF965NQP/@@download/ENCFF965NQP.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF036PCO bed narrowPeak conservative idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF710PCL, ENCFF815TNI, ENCFF965NQP 24243 ENCODE Processing Pipeline d233df216776f5a7b3027037942b7d5e https://www.encodeproject.org/files/ENCFF036PCO/@@download/ENCFF036PCO.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF406XWT bed narrowPeak optimal idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF710PCL, ENCFF815TNI, ENCFF965NQP 42946 ENCODE Processing Pipeline a785b0ab3b99263face2d00adc1c5c70 https://www.encodeproject.org/files/ENCFF406XWT/@@download/ENCFF406XWT.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF719RTA bed narrowPeak conservative idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF207HZD, ENCFF237JZC, ENCFF847LIB 20640 ENCODE Processing Pipeline 56cb9e83967cb122600b574351b9c3dd https://www.encodeproject.org/files/ENCFF719RTA/@@download/ENCFF719RTA.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF176NOI bed narrowPeak optimal idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF207HZD, ENCFF237JZC, ENCFF847LIB 36606 ENCODE Processing Pipeline 607bb4cf8872522d66cec5314f6ad991 https://www.encodeproject.org/files/ENCFF176NOI/@@download/ENCFF176NOI.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF367KYN bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF169LKQ, ENCFF563OVT 6402393 ENCODE Processing Pipeline 4b7df7883c2538296b947e03cbc3ab8d https://www.encodeproject.org/files/ENCFF367KYN/@@download/ENCFF367KYN.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF119DBB bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF563OVT, ENCFF708ZXK 5808722 ENCODE Processing Pipeline 61b7ec4a83f998815e2e8b035034a85c https://www.encodeproject.org/files/ENCFF119DBB/@@download/ENCFF119DBB.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF163SYH bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF169LKQ, ENCFF563OVT, ENCFF708ZXK 7095681 ENCODE Processing Pipeline 207f90c80050a48c07e83c72c794639f https://www.encodeproject.org/files/ENCFF163SYH/@@download/ENCFF163SYH.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF471VXD bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF829XLC, ENCFF936BLQ 5668159 ENCODE Processing Pipeline a6bac39081c84d1b8c1604783a50dba4 https://www.encodeproject.org/files/ENCFF471VXD/@@download/ENCFF471VXD.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF625AOG bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF771KEQ, ENCFF936BLQ 6257787 ENCODE Processing Pipeline ccbd56a931d20fc930e84f7b34c9fef1 https://www.encodeproject.org/files/ENCFF625AOG/@@download/ENCFF625AOG.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF200RYV bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF771KEQ, ENCFF829XLC, ENCFF936BLQ 6995284 ENCODE Processing Pipeline f0e4ea7436bf884646ce2abbff27188d https://www.encodeproject.org/files/ENCFF200RYV/@@download/ENCFF200RYV.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF286JTK bed narrowPeak conservative idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF200RYV, ENCFF419RSJ, ENCFF471VXD, ENCFF625AOG 152294 ENCODE Processing Pipeline 11c6a1983e80e59d32f1455140ed9ae4 https://www.encodeproject.org/files/ENCFF286JTK/@@download/ENCFF286JTK.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF381GEK bed narrowPeak optimal idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF200RYV, ENCFF419RSJ, ENCFF471VXD, ENCFF625AOG 224803 ENCODE Processing Pipeline 90e495f57873d7227a45d82efa759347 https://www.encodeproject.org/files/ENCFF381GEK/@@download/ENCFF381GEK.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF387ZED bed narrowPeak conservative idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF119DBB, ENCFF163SYH, ENCFF367KYN 124796 ENCODE Processing Pipeline 1c47d766d473a12e61a1c3dc9c644db4 https://www.encodeproject.org/files/ENCFF387ZED/@@download/ENCFF387ZED.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF802XZN bed narrowPeak optimal idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF119DBB, ENCFF163SYH, ENCFF367KYN 180679 ENCODE Processing Pipeline c2b97dbdcdb1a3eb640515e00cd7a237 https://www.encodeproject.org/files/ENCFF802XZN/@@download/ENCFF802XZN.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF272ULO bed narrowPeak optimal idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF001TDO, ENCFF183FOU, ENCFF335AYY, ENCFF880AEL 839761 ENCODE Processing Pipeline 29d7e21f3c25f41bd7185514faa49553 https://www.encodeproject.org/files/ENCFF272ULO/@@download/ENCFF272ULO.bed.gz hg19 released experiment not submitted to GEO ENCFF183FOU bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF666KPK, ENCFF929HAN 7199777 ENCODE Processing Pipeline bad146c1707938eeacedc3cfa7174b29 https://www.encodeproject.org/files/ENCFF183FOU/@@download/ENCFF183FOU.bed.gz hg19 released experiment not submitted to GEO, mismatched status ENCFF880AEL bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF309ASH, ENCFF666KPK, ENCFF929HAN 7310147 ENCODE Processing Pipeline 4ca0318ae43ad207a919bf225255991b https://www.encodeproject.org/files/ENCFF880AEL/@@download/ENCFF880AEL.bed.gz hg19 released experiment not submitted to GEO, mismatched status ENCFF797MRW bed narrowPeak optimal idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF401GFI, ENCFF419RSJ, ENCFF637YLM, ENCFF875VQM 841645 ENCODE Processing Pipeline d4109884f770228a5eb64a2622e4f30b https://www.encodeproject.org/files/ENCFF797MRW/@@download/ENCFF797MRW.bed.gz GRCh38 released experiment not submitted to GEO ENCFF335AYY bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF309ASH, ENCFF666KPK 7134776 ENCODE Processing Pipeline 7003592965f9b217550bb6548c2dd4f1 https://www.encodeproject.org/files/ENCFF335AYY/@@download/ENCFF335AYY.bed.gz hg19 released experiment not submitted to GEO, mismatched status ENCFF674WGB bed narrowPeak conservative idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF001TDO, ENCFF183FOU, ENCFF335AYY, ENCFF880AEL 734107 ENCODE Processing Pipeline aa6eeaf78f1fbb224fd42ca73c50a831 https://www.encodeproject.org/files/ENCFF674WGB/@@download/ENCFF674WGB.bed.gz hg19 released experiment not submitted to GEO ENCFF401GFI bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF092XPV, ENCFF713PVH 7119297 ENCODE Processing Pipeline f65da31c713ff3f15222dbcdfcffbea9 https://www.encodeproject.org/files/ENCFF401GFI/@@download/ENCFF401GFI.bed.gz GRCh38 released experiment not submitted to GEO, mismatched status ENCFF875VQM bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF092XPV, ENCFF713PVH, ENCFF801LQC 7281778 ENCODE Processing Pipeline a0d005e89242b10a6ef7e7328289427b https://www.encodeproject.org/files/ENCFF875VQM/@@download/ENCFF875VQM.bed.gz GRCh38 released experiment not submitted to GEO, mismatched status ENCFF638SAT bed narrowPeak conservative idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF401GFI, ENCFF419RSJ, ENCFF637YLM, ENCFF875VQM 722413 ENCODE Processing Pipeline e12eefbd6bb8cc4cb216ce3171661a1e https://www.encodeproject.org/files/ENCFF638SAT/@@download/ENCFF638SAT.bed.gz GRCh38 released experiment not submitted to GEO ENCFF637YLM bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF713PVH, ENCFF801LQC 7084942 ENCODE Processing Pipeline a6381d775e78814b8726ea3b8d6dd7bc https://www.encodeproject.org/files/ENCFF637YLM/@@download/ENCFF637YLM.bed.gz GRCh38 released experiment not submitted to GEO, mismatched status ENCFF002CEO bed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 121425 ENCODE Consortium Analysis Working Group 636ef8b5c6f6f03df33fbf7456260d38 https://www.encodeproject.org/files/ENCFF002CEO/@@download/ENCFF002CEO.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth missing derived_from ENCFF363GSV bed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF325JSZ, ENCFF419RSJ, ENCFF632FBG, ENCFF951IMJ 100086 ENCODE Processing Pipeline 67405073f47d435e55cd4f45c411b2d2 https://www.encodeproject.org/files/ENCFF363GSV/@@download/ENCFF363GSV.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF325JSZ bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF610YXS 4350637 ENCODE Processing Pipeline ff042d67bdb8fcafefa7e81bc4fd7125 https://www.encodeproject.org/files/ENCFF325JSZ/@@download/ENCFF325JSZ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF680CDC bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF118VIO, ENCFF245PJA, ENCFF574XYY, ENCFF979MVK 5850772 ENCODE Processing Pipeline a32dfdd5ef16afbcaeeebbaccb10f1f6 https://www.encodeproject.org/files/ENCFF680CDC/@@download/ENCFF680CDC.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF713HRG bed narrowPeak conservative idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF233XEO, ENCFF680CDC, ENCFF930KIS 68082 ENCODE Processing Pipeline 0477a7db4edd8a8b05d4b3754310d83a https://www.encodeproject.org/files/ENCFF713HRG/@@download/ENCFF713HRG.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF657VJX bed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF233XEO, ENCFF680CDC, ENCFF930KIS 93415 ENCODE Processing Pipeline e7464d52ba1f458c1b5e6a0c4a1cfecd https://www.encodeproject.org/files/ENCFF657VJX/@@download/ENCFF657VJX.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF951IMJ bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF456VOS 4119489 ENCODE Processing Pipeline 28289ab9ff8ea1fac55a2ffa34274695 https://www.encodeproject.org/files/ENCFF951IMJ/@@download/ENCFF951IMJ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF233XEO bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF574XYY, ENCFF979MVK 4369803 ENCODE Processing Pipeline c93be7987719bacc0e44acae6a84097b https://www.encodeproject.org/files/ENCFF233XEO/@@download/ENCFF233XEO.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF930KIS bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF118VIO, ENCFF245PJA 4151818 ENCODE Processing Pipeline fe651af8616d0ff1d7b529fa8ae545d9 https://www.encodeproject.org/files/ENCFF930KIS/@@download/ENCFF930KIS.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF660FBQ bed narrowPeak conservative idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF325JSZ, ENCFF419RSJ, ENCFF632FBG, ENCFF951IMJ 69329 ENCODE Processing Pipeline 05eed361f56bb6ec98026a3f57b05822 https://www.encodeproject.org/files/ENCFF660FBQ/@@download/ENCFF660FBQ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF632FBG bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF456VOS, ENCFF610YXS 5844670 ENCODE Processing Pipeline 1e42441c63dd7b2f207b59a107627b2a https://www.encodeproject.org/files/ENCFF632FBG/@@download/ENCFF632FBG.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth ENCFF002CEK bed narrowPeak optimal idr thresholded peaks ENCSR000AQD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 231778 ENCODE Consortium Analysis Working Group 5bfc2bf2123f8f00c74dbb393c91d933 https://www.encodeproject.org/files/ENCFF002CEK/@@download/ENCFF002CEK.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length missing derived_from ENCFF001VOR bed narrowPeak peaks ENCSR000DOH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 11275 Kevin Struhl, HMS 4b8fa5ee502da30b76a77d4a727c3bc9 https://www.encodeproject.org/files/ENCFF001VOR/@@download/ENCFF001VOR.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CXZ bed narrowPeak optimal idr thresholded peaks ENCSR000DOH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 59038 ENCODE Consortium Analysis Working Group a4825e3644d78fd762ac3b567f9c698a https://www.encodeproject.org/files/ENCFF002CXZ/@@download/ENCFF002CXZ.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CEL bed narrowPeak optimal idr thresholded peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1231983 ENCODE Consortium Analysis Working Group 7ddb20610be6d90b16f37e167c79f019 https://www.encodeproject.org/files/ENCFF002CEL/@@download/ENCFF002CEL.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, low read length missing derived_from insufficient read depth ENCFF044KHD bed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 ENCFF871GXE 3101805 ENCODE Processing Pipeline 2f2f9c0d38ebdeedb1c72d8c0b009710 https://www.encodeproject.org/files/ENCFF044KHD/@@download/ENCFF044KHD.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF712ETC bed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 ENCFF550BMQ 4160754 ENCODE Processing Pipeline 03ad07720a9d5b9f61893c2ca50a10a2 https://www.encodeproject.org/files/ENCFF712ETC/@@download/ENCFF712ETC.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF519CXF bed narrowPeak optimal idr thresholded peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF044KHD, ENCFF419RSJ, ENCFF712ETC, ENCFF873LHT 873695 ENCODE Processing Pipeline 7828af6ccfcb579226ce54757b98f05b https://www.encodeproject.org/files/ENCFF519CXF/@@download/ENCFF519CXF.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF873LHT bed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF550BMQ, ENCFF871GXE 5360130 ENCODE Processing Pipeline 4d84d257fff852f460889186b6e3f077 https://www.encodeproject.org/files/ENCFF873LHT/@@download/ENCFF873LHT.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF229LJO bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF048VYQ, ENCFF839YOM, ENCFF986OUP 6629582 ENCODE Processing Pipeline 6ea7174083212bf7161b70ea35301d5c https://www.encodeproject.org/files/ENCFF229LJO/@@download/ENCFF229LJO.bed.gz hg19 released missing unfiltered alignments, mismatched status ENCFF524QUC bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016MFU, ENCFF048VYQ, ENCFF839YOM, ENCFF986OUP 7101184 ENCODE Processing Pipeline 45256f7957987020bbac427794291943 https://www.encodeproject.org/files/ENCFF524QUC/@@download/ENCFF524QUC.bed.gz hg19 released missing unfiltered alignments, mismatched status ENCFF323QXY bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF016MFU, ENCFF048VYQ, ENCFF839YOM 6574848 ENCODE Processing Pipeline 80bc61446b1885b084dd86fe805013a8 https://www.encodeproject.org/files/ENCFF323QXY/@@download/ENCFF323QXY.bed.gz hg19 released missing unfiltered alignments, mismatched status ENCFF371IMA bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF035GBL 6372209 ENCODE Processing Pipeline 9731b9cdb0623a4de180b26b61ca4dc5 https://www.encodeproject.org/files/ENCFF371IMA/@@download/ENCFF371IMA.bed.gz GRCh38 released missing unfiltered alignments ENCFF938QIC bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF035GBL, ENCFF261BXO 6955462 ENCODE Processing Pipeline 34ff6da1005d65084f0a0455fe945330 https://www.encodeproject.org/files/ENCFF938QIC/@@download/ENCFF938QIC.bed.gz GRCh38 released missing unfiltered alignments ENCFF086AMQ bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF261BXO 6468341 ENCODE Processing Pipeline 1d51a115dc7d2efa52004b7ef1f29901 https://www.encodeproject.org/files/ENCFF086AMQ/@@download/ENCFF086AMQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF619KWZ bed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086AMQ, ENCFF371IMA, ENCFF419RSJ, ENCFF938QIC 93920 ENCODE Processing Pipeline 80c2419a8c439902fab5ff013c93e6c8 https://www.encodeproject.org/files/ENCFF619KWZ/@@download/ENCFF619KWZ.bed.gz GRCh38 released missing unfiltered alignments ENCFF388TYU bed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086AMQ, ENCFF371IMA, ENCFF419RSJ, ENCFF938QIC 108938 ENCODE Processing Pipeline 97f1ac53cbf7b2049fdc18567c700d9c https://www.encodeproject.org/files/ENCFF388TYU/@@download/ENCFF388TYU.bed.gz GRCh38 released missing unfiltered alignments ENCFF654CST bed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF229LJO, ENCFF323QXY, ENCFF524QUC 81512 ENCODE Processing Pipeline 89fe8e5c3e91937980c28c18f366c07b https://www.encodeproject.org/files/ENCFF654CST/@@download/ENCFF654CST.bed.gz hg19 released missing unfiltered alignments ENCFF650ELJ bed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF229LJO, ENCFF323QXY, ENCFF524QUC 94754 ENCODE Processing Pipeline 648ffa44acc0080b9f58e101e4240480 https://www.encodeproject.org/files/ENCFF650ELJ/@@download/ENCFF650ELJ.bed.gz hg19 released missing unfiltered alignments ENCFF001VPD bed narrowPeak peaks ENCSR000DOD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 34579 Kevin Struhl, HMS 0255769bf5158424ac1aa0f59759db60 https://www.encodeproject.org/files/ENCFF001VPD/@@download/ENCFF001VPD.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CYL bed narrowPeak optimal idr thresholded peaks ENCSR000DOD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 38890 ENCODE Consortium Analysis Working Group 7838d8b05a9dbfdedb09c34d31bbe8e8 https://www.encodeproject.org/files/ENCFF002CYL/@@download/ENCFF002CYL.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF597QZY bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF232RDZ, ENCFF907MUS 5919643 ENCODE Processing Pipeline 5663b0730a149ef14f905bc402ced55b https://www.encodeproject.org/files/ENCFF597QZY/@@download/ENCFF597QZY.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF003PSH bed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF539OHR, ENCFF597QZY, ENCFF906WAQ 70177 ENCODE Processing Pipeline fe52b915cd3c6bdc7a54add5484f1b6d https://www.encodeproject.org/files/ENCFF003PSH/@@download/ENCFF003PSH.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF269EMM bed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF539OHR, ENCFF597QZY, ENCFF906WAQ 71060 ENCODE Processing Pipeline af53a063019d668f2053979d501052f0 https://www.encodeproject.org/files/ENCFF269EMM/@@download/ENCFF269EMM.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF539OHR bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF907MUS 5029003 ENCODE Processing Pipeline 139796eb1ef6b10e47dd7dcd30db30a3 https://www.encodeproject.org/files/ENCFF539OHR/@@download/ENCFF539OHR.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF906WAQ bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF232RDZ 4866259 ENCODE Processing Pipeline 08d4a0372abef1262df64685abf4d357 https://www.encodeproject.org/files/ENCFF906WAQ/@@download/ENCFF906WAQ.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF428CPW bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF030XLK 4789332 ENCODE Processing Pipeline ac6bfa830672a3c48296508dab15ad48 https://www.encodeproject.org/files/ENCFF428CPW/@@download/ENCFF428CPW.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF479NRZ bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF030XLK, ENCFF072SKI 5559162 ENCODE Processing Pipeline 1fe0e3b2fa1fbd6d5f49583c1e94b74d https://www.encodeproject.org/files/ENCFF479NRZ/@@download/ENCFF479NRZ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF958UWK bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF072SKI 4569141 ENCODE Processing Pipeline 5833361a90c90b9a365f6a3de284a994 https://www.encodeproject.org/files/ENCFF958UWK/@@download/ENCFF958UWK.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF270VUX bed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF428CPW, ENCFF479NRZ, ENCFF958UWK 70616 ENCODE Processing Pipeline d2e6b29ef9a1a8ee426483e95978a335 https://www.encodeproject.org/files/ENCFF270VUX/@@download/ENCFF270VUX.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF925OBR bed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF428CPW, ENCFF479NRZ, ENCFF958UWK 71594 ENCODE Processing Pipeline a192e09fb75616923efec4f248adf041 https://www.encodeproject.org/files/ENCFF925OBR/@@download/ENCFF925OBR.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF001VNT bed narrowPeak peaks ENCSR000FAE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-10-29 ENCODE 45577 Sherman Weissman, Yale a19aaf8abd95dbbb946feef40beb6e21 https://www.encodeproject.org/files/ENCFF001VNT/@@download/ENCFF001VNT.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF496DRF bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF122RZR, ENCFF749SPN 6600546 ENCODE Processing Pipeline e10b945072947412a4967a04e7cda307 https://www.encodeproject.org/files/ENCFF496DRF/@@download/ENCFF496DRF.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF586UNH bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF122RZR, ENCFF151KAU, ENCFF749SPN 7054018 ENCODE Processing Pipeline 9aa1c3c23f60d389f728bb3134d3104c https://www.encodeproject.org/files/ENCFF586UNH/@@download/ENCFF586UNH.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF870WRO bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF122RZR, ENCFF151KAU 6411041 ENCODE Processing Pipeline 7468371d858620d613dcb242d0996952 https://www.encodeproject.org/files/ENCFF870WRO/@@download/ENCFF870WRO.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF262GOA bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF057CNY, ENCFF216TEN, ENCFF299GMC 6928691 ENCODE Processing Pipeline 882ca87ae01575f85d685afdf35e6a56 https://www.encodeproject.org/files/ENCFF262GOA/@@download/ENCFF262GOA.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF259KSQ bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF057CNY, ENCFF299GMC 6209799 ENCODE Processing Pipeline d607734184b9949a6bb9a0fe2fc6af5a https://www.encodeproject.org/files/ENCFF259KSQ/@@download/ENCFF259KSQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF546FHG bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF216TEN, ENCFF299GMC 6457109 ENCODE Processing Pipeline 393ce6395ed413092a919bd580df2309 https://www.encodeproject.org/files/ENCFF546FHG/@@download/ENCFF546FHG.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF757ULW bed narrowPeak conservative idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF259KSQ, ENCFF262GOA, ENCFF419RSJ, ENCFF546FHG 270644 ENCODE Processing Pipeline 3dd73563254d747956a32a24202c15a9 https://www.encodeproject.org/files/ENCFF757ULW/@@download/ENCFF757ULW.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF544HIJ bed narrowPeak optimal idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF259KSQ, ENCFF262GOA, ENCFF419RSJ, ENCFF546FHG 275769 ENCODE Processing Pipeline a03a4b47186bd0794eef7366c45cf94e https://www.encodeproject.org/files/ENCFF544HIJ/@@download/ENCFF544HIJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF498DWU bed narrowPeak conservative idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF496DRF, ENCFF586UNH, ENCFF870WRO 220043 ENCODE Processing Pipeline 597a43b6282361a313cf2dac044aed32 https://www.encodeproject.org/files/ENCFF498DWU/@@download/ENCFF498DWU.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF815TTY bed narrowPeak optimal idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF496DRF, ENCFF586UNH, ENCFF870WRO 231991 ENCODE Processing Pipeline 8eb29d69d43dda0167d9a6380166fde5 https://www.encodeproject.org/files/ENCFF815TTY/@@download/ENCFF815TTY.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF203IYU bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092TPD 5743958 ENCODE Processing Pipeline a1f5c21907d2c7d2a51fd6ba43811b72 https://www.encodeproject.org/files/ENCFF203IYU/@@download/ENCFF203IYU.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF703QQK bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF092TPD, ENCFF468LGZ 6484414 ENCODE Processing Pipeline cdf0f321a7c2edec1015a64dff75ba9a https://www.encodeproject.org/files/ENCFF703QQK/@@download/ENCFF703QQK.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF098RZO bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF468LGZ 5456078 ENCODE Processing Pipeline a20d08cef41cf34690c4b645a5314f10 https://www.encodeproject.org/files/ENCFF098RZO/@@download/ENCFF098RZO.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF403TAE bed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF098RZO, ENCFF203IYU, ENCFF419RSJ, ENCFF703QQK 126176 ENCODE Processing Pipeline 0a2c23700963d8712529a64a2b3d03a3 https://www.encodeproject.org/files/ENCFF403TAE/@@download/ENCFF403TAE.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF525FJA bed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF098RZO, ENCFF203IYU, ENCFF419RSJ, ENCFF703QQK 117052 ENCODE Processing Pipeline 8b402e7dd389473e2aceb4d748390b25 https://www.encodeproject.org/files/ENCFF525FJA/@@download/ENCFF525FJA.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF361FQK bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF454ZDW 5521548 ENCODE Processing Pipeline 546f0aed9f7d2c4d9afeb14cb1c1159f https://www.encodeproject.org/files/ENCFF361FQK/@@download/ENCFF361FQK.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF978SSL bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ 5968427 ENCODE Processing Pipeline 25f52f43840b144d07c960e5eafe18e9 https://www.encodeproject.org/files/ENCFF978SSL/@@download/ENCFF978SSL.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF219DOH bed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF361FQK, ENCFF843XJF, ENCFF978SSL 114020 ENCODE Processing Pipeline 6988bdc10ce774b12b0db425c848158c https://www.encodeproject.org/files/ENCFF219DOH/@@download/ENCFF219DOH.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF843XJF bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ, ENCFF454ZDW 6501047 ENCODE Processing Pipeline cc4a92f0c29867bfd253d5b2e84101ef https://www.encodeproject.org/files/ENCFF843XJF/@@download/ENCFF843XJF.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF062ARS bed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF361FQK, ENCFF843XJF, ENCFF978SSL 127162 ENCODE Processing Pipeline 169dba7b829155124d33176148608d77 https://www.encodeproject.org/files/ENCFF062ARS/@@download/ENCFF062ARS.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF001UTF bed narrowPeak peaks ENCSR000DLY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2943334 Vishwanath Iyer, UTA cce54edb5e2bd0631db9d67b6025055e https://www.encodeproject.org/files/ENCFF001UTF/@@download/ENCFF001UTF.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002DBE bed narrowPeak optimal idr thresholded peaks ENCSR000DLY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 393445 ENCODE Consortium Analysis Working Group 76fdcd501f47277f244843987ac855ba https://www.encodeproject.org/files/ENCFF002DBE/@@download/ENCFF002DBE.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF001VMC bed narrowPeak peaks ENCSR000DOJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 1975 Kevin Struhl, HMS 2c48e5cbdc23bf72359224b3c7554089 https://www.encodeproject.org/files/ENCFF001VMC/@@download/ENCFF001VMC.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CVR bed narrowPeak optimal idr thresholded peaks ENCSR000DOJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 5144 ENCODE Consortium Analysis Working Group 64986bc4157feecb565adbfe599fcc07 https://www.encodeproject.org/files/ENCFF002CVR/@@download/ENCFF002CVR.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF521WEX bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF064YUE, ENCFF268SHC 5731296 ENCODE Processing Pipeline 47f9f3c9fef8c244efac26f3a0b12900 https://www.encodeproject.org/files/ENCFF521WEX/@@download/ENCFF521WEX.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF629GGT bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF064YUE, ENCFF878ETO 5713700 ENCODE Processing Pipeline a321149a06867510cb81062207589609 https://www.encodeproject.org/files/ENCFF629GGT/@@download/ENCFF629GGT.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF639WQU bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF064YUE, ENCFF268SHC, ENCFF878ETO 6409135 ENCODE Processing Pipeline 878d8b59cd7b47cfe4587112875e991e https://www.encodeproject.org/files/ENCFF639WQU/@@download/ENCFF639WQU.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF687WBD bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF834YLT 5521674 ENCODE Processing Pipeline 9fb037ae36e9c53e3b6155356816f47a https://www.encodeproject.org/files/ENCFF687WBD/@@download/ENCFF687WBD.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF649WHI bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF904PBR 5495080 ENCODE Processing Pipeline 97c876afe1382a8e9c20e29de7d21e76 https://www.encodeproject.org/files/ENCFF649WHI/@@download/ENCFF649WHI.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF398CHE bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF834YLT, ENCFF904PBR 6220193 ENCODE Processing Pipeline d33660160eefc5aca7140116c8d000f4 https://www.encodeproject.org/files/ENCFF398CHE/@@download/ENCFF398CHE.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF175IUD bed narrowPeak optimal idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF398CHE, ENCFF419RSJ, ENCFF649WHI, ENCFF687WBD 276928 ENCODE Processing Pipeline b3eac9d896ea336fa10a26c381005680 https://www.encodeproject.org/files/ENCFF175IUD/@@download/ENCFF175IUD.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF452SPE bed narrowPeak optimal idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF521WEX, ENCFF629GGT, ENCFF639WQU 235803 ENCODE Processing Pipeline 7c83d0cc8201d650834cf642030fa17c https://www.encodeproject.org/files/ENCFF452SPE/@@download/ENCFF452SPE.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF797AAQ bed narrowPeak conservative idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF521WEX, ENCFF629GGT, ENCFF639WQU 225949 ENCODE Processing Pipeline 6e88bb45e6fc9cfcfe210b7a58aef722 https://www.encodeproject.org/files/ENCFF797AAQ/@@download/ENCFF797AAQ.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF001VOZ bed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1044594 Michael Snyder, Stanford 7fd1ea6d689f63e143cbf61acbf5539b https://www.encodeproject.org/files/ENCFF001VOZ/@@download/ENCFF001VOZ.bed.gz hg19 released low read depth, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF002CYH bed narrowPeak optimal idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 631761 ENCODE Consortium Analysis Working Group e1679483ad761bef6924874a72a68d6e https://www.encodeproject.org/files/ENCFF002CYH/@@download/ENCFF002CYH.bed.gz hg19 released low read depth, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF377KNC bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF496ANK, ENCFF845UEU 6391584 ENCODE Processing Pipeline 8c8e547d257945af136b6f2be70dec7e https://www.encodeproject.org/files/ENCFF377KNC/@@download/ENCFF377KNC.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF307MIA bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF013WTE, ENCFF496ANK 6173968 ENCODE Processing Pipeline 15113e25626fbfbdb4bc89e7b87c6637 https://www.encodeproject.org/files/ENCFF307MIA/@@download/ENCFF307MIA.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF816UNQ bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF013WTE, ENCFF496ANK, ENCFF845UEU 7019159 ENCODE Processing Pipeline 882189324763d320649004f168a954b8 https://www.encodeproject.org/files/ENCFF816UNQ/@@download/ENCFF816UNQ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF372WLC bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF730MAX 6220212 ENCODE Processing Pipeline 8bdcefbf07262df0dba86c2c7bc35f03 https://www.encodeproject.org/files/ENCFF372WLC/@@download/ENCFF372WLC.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF304MSV bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF384DMV 6020442 ENCODE Processing Pipeline d02c6fbc78d8241adf3bcad678e6de39 https://www.encodeproject.org/files/ENCFF304MSV/@@download/ENCFF304MSV.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF452IVR bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF384DMV, ENCFF730MAX 6942828 ENCODE Processing Pipeline 3d99a316d91b502dca9327b5d6444b73 https://www.encodeproject.org/files/ENCFF452IVR/@@download/ENCFF452IVR.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF724JQX bed narrowPeak conservative idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF304MSV, ENCFF372WLC, ENCFF419RSJ, ENCFF452IVR 118143 ENCODE Processing Pipeline 19a03e405206433daf3e364a3ae4fb12 https://www.encodeproject.org/files/ENCFF724JQX/@@download/ENCFF724JQX.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF108JFW bed narrowPeak optimal idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF304MSV, ENCFF372WLC, ENCFF419RSJ, ENCFF452IVR 149217 ENCODE Processing Pipeline 5d8acef49b68b5aa5eb08a6fbe28e3c2 https://www.encodeproject.org/files/ENCFF108JFW/@@download/ENCFF108JFW.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF322LZW bed narrowPeak conservative idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF307MIA, ENCFF377KNC, ENCFF816UNQ 95844 ENCODE Processing Pipeline 91fb15bea82e901f80e5f72fd85629a4 https://www.encodeproject.org/files/ENCFF322LZW/@@download/ENCFF322LZW.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF408SNO bed narrowPeak optimal idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF307MIA, ENCFF377KNC, ENCFF816UNQ 122119 ENCODE Processing Pipeline 303ed3ff929ea3bdad495908705d0662 https://www.encodeproject.org/files/ENCFF408SNO/@@download/ENCFF408SNO.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF948LKX bed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF089SHU, ENCFF189NGD, ENCFF624BVW 61161 ENCODE Processing Pipeline 6bf4211ebb28bb585bfed486973ea06c https://www.encodeproject.org/files/ENCFF948LKX/@@download/ENCFF948LKX.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF030HWZ bed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF089SHU, ENCFF189NGD, ENCFF624BVW 67700 ENCODE Processing Pipeline 31e9c7f935021b20bb5a136f5eb5d3e0 https://www.encodeproject.org/files/ENCFF030HWZ/@@download/ENCFF030HWZ.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF189NGD bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF837QKV 4759023 ENCODE Processing Pipeline 886ecf5439e7455261cced5fc2c31058 https://www.encodeproject.org/files/ENCFF189NGD/@@download/ENCFF189NGD.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF624BVW bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF447TYF 5039056 ENCODE Processing Pipeline e1727509e123689203fbeea3fbb815b8 https://www.encodeproject.org/files/ENCFF624BVW/@@download/ENCFF624BVW.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF089SHU bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF447TYF, ENCFF837QKV 5945369 ENCODE Processing Pipeline f27db7e818966d03ddf8bbf524186d49 https://www.encodeproject.org/files/ENCFF089SHU/@@download/ENCFF089SHU.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF522YTF bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF780DBH 4783025 ENCODE Processing Pipeline 996eed7efbed03b85dcddfb59399286a https://www.encodeproject.org/files/ENCFF522YTF/@@download/ENCFF522YTF.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF313YNI bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF515YFJ, ENCFF780DBH 5665303 ENCODE Processing Pipeline e3738c7722a7a14f582bf9e13eff43c0 https://www.encodeproject.org/files/ENCFF313YNI/@@download/ENCFF313YNI.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF644UJA bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF515YFJ 4434443 ENCODE Processing Pipeline 7b187a58788511e2c520599628303b57 https://www.encodeproject.org/files/ENCFF644UJA/@@download/ENCFF644UJA.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF539RBU bed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF313YNI, ENCFF419RSJ, ENCFF522YTF, ENCFF644UJA 60685 ENCODE Processing Pipeline 4b8f00ffef20199a9dadd77f65ea9203 https://www.encodeproject.org/files/ENCFF539RBU/@@download/ENCFF539RBU.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF715PLB bed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF313YNI, ENCFF419RSJ, ENCFF522YTF, ENCFF644UJA 64654 ENCODE Processing Pipeline a7aecaf01e510d88609e18f39450c557 https://www.encodeproject.org/files/ENCFF715PLB/@@download/ENCFF715PLB.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF027OOJ bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF593XTM 6499408 ENCODE Processing Pipeline 6653b30f24293a674c28242dc5bc4615 https://www.encodeproject.org/files/ENCFF027OOJ/@@download/ENCFF027OOJ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF119GNW bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF400MMA 6767109 ENCODE Processing Pipeline 49b75d9293f30a57900c15a39b0da469 https://www.encodeproject.org/files/ENCFF119GNW/@@download/ENCFF119GNW.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF535BMV bed narrowPeak optimal idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF027OOJ, ENCFF119GNW, ENCFF419RSJ, ENCFF832TTO 590995 ENCODE Processing Pipeline 262c811193da09ef8b05fb6bf75cc9be https://www.encodeproject.org/files/ENCFF535BMV/@@download/ENCFF535BMV.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF832TTO bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF400MMA, ENCFF593XTM 7041671 ENCODE Processing Pipeline 435a35a6cd32a8509331fab075986a9f https://www.encodeproject.org/files/ENCFF832TTO/@@download/ENCFF832TTO.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF492VKT bed narrowPeak conservative idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF027OOJ, ENCFF119GNW, ENCFF419RSJ, ENCFF832TTO 587036 ENCODE Processing Pipeline db2eabb0435fc97dd4ebadab29267c27 https://www.encodeproject.org/files/ENCFF492VKT/@@download/ENCFF492VKT.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF685KAG bed narrowPeak optimal idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF026SKI, ENCFF835LBQ, ENCFF845TET 590608 ENCODE Processing Pipeline 2642e3d21c71e17716b79b0496bbf05b https://www.encodeproject.org/files/ENCFF685KAG/@@download/ENCFF685KAG.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF845TET bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF009ZXV, ENCFF629YBN 6765258 ENCODE Processing Pipeline e7f259ed3066ecddb659b324d47541a4 https://www.encodeproject.org/files/ENCFF845TET/@@download/ENCFF845TET.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF026SKI bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF629YBN, ENCFF772DPI 6500124 ENCODE Processing Pipeline e9deff36e8ad4de02867558a33ef1222 https://www.encodeproject.org/files/ENCFF026SKI/@@download/ENCFF026SKI.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF835LBQ bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF009ZXV, ENCFF629YBN, ENCFF772DPI 7040983 ENCODE Processing Pipeline 0660ffc5d585df2a9dae9ae59d22e30d https://www.encodeproject.org/files/ENCFF835LBQ/@@download/ENCFF835LBQ.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF427YBA bed narrowPeak conservative idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF026SKI, ENCFF835LBQ, ENCFF845TET 586872 ENCODE Processing Pipeline c7604f39f8cc2afd5107ead2064eeb57 https://www.encodeproject.org/files/ENCFF427YBA/@@download/ENCFF427YBA.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF002CEM bed narrowPeak optimal idr thresholded peaks ENCSR000AQE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 45174 ENCODE Consortium Analysis Working Group 74f6a178b30866dcc4cb2563536ecc37 https://www.encodeproject.org/files/ENCFF002CEM/@@download/ENCFF002CEM.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing derived_from ENCFF002CEQ bed narrowPeak optimal idr thresholded peaks ENCSR000AQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-03-06 ENCODE 72594 ENCODE Consortium Analysis Working Group d3c2a244c475cf48d25e0de0c76d8c21 https://www.encodeproject.org/files/ENCFF002CEQ/@@download/ENCFF002CEQ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF001VPF bed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 635418 Michael Snyder, Stanford ca98f991de776737876fa7ed62528aaf https://www.encodeproject.org/files/ENCFF001VPF/@@download/ENCFF001VPF.bed.gz hg19 released low read depth, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF002CYN bed narrowPeak optimal idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 157971 ENCODE Consortium Analysis Working Group f0874364421681ba4667eee47c4a2ccf https://www.encodeproject.org/files/ENCFF002CYN/@@download/ENCFF002CYN.bed.gz hg19 released low read depth, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF001UWS bed narrowPeak peaks ENCSR000EKO DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens dimethyl sulfoxide DNA see document see document False 2012-08-28 ENCODE 2218978 Gregory Crawford, Duke b2127a59f5a0a232bb914e865b635134 https://www.encodeproject.org/files/ENCFF001UWS/@@download/ENCFF001UWS.bed.gz hg19 archived low spot score missing derived_from, mismatched file status, biological replicates with identical biosample insufficient spot score ENCFF001VOM bed narrowPeak peaks ENCSR000FAD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 264510 Sherman Weissman, Yale 31e26aa8be8f75f6f0ebfbc12e2a904f https://www.encodeproject.org/files/ENCFF001VOM/@@download/ENCFF001VOM.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF002CXU bed narrowPeak optimal idr thresholded peaks ENCSR000FAD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 367853 ENCODE Consortium Analysis Working Group 37b2c03ce75692dc617fa321d3f65c51 https://www.encodeproject.org/files/ENCFF002CXU/@@download/ENCFF002CXU.bed.gz hg19 released missing derived_from, biological replicates with identical biosample insufficient read length ENCFF001VMH bed narrowPeak peaks ENCSR000FAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 103402 Sherman Weissman, Yale b271e724564862010afa14bee0b59a10 https://www.encodeproject.org/files/ENCFF001VMH/@@download/ENCFF001VMH.bed.gz hg19 released missing derived_from, biological replicates with identical biosample, NTR biosample insufficient read length ENCFF002CVW bed narrowPeak optimal idr thresholded peaks ENCSR000FAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 153814 ENCODE Consortium Analysis Working Group 6dcfdb373210f92a6f160dc9869db949 https://www.encodeproject.org/files/ENCFF002CVW/@@download/ENCFF002CVW.bed.gz hg19 released missing derived_from, biological replicates with identical biosample, NTR biosample insufficient read length ENCFF266QUX bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF346SNT, ENCFF779PRW 7071353 ENCODE Processing Pipeline f859676fb70a9aa05e4aed818d55c2d7 https://www.encodeproject.org/files/ENCFF266QUX/@@download/ENCFF266QUX.bed.gz GRCh38 released missing unfiltered alignments ENCFF658HYK bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF002PNZ, ENCFF779PRW 7133643 ENCODE Processing Pipeline c6957e9a6bc990b1091e536cfb6a34b2 https://www.encodeproject.org/files/ENCFF658HYK/@@download/ENCFF658HYK.bed.gz GRCh38 released missing unfiltered alignments ENCFF547SJG bed narrowPeak optimal idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF266QUX, ENCFF419RSJ, ENCFF648FRJ, ENCFF658HYK 1166965 ENCODE Processing Pipeline 9566f5e3ed270c2ad7aee15acabe49d0 https://www.encodeproject.org/files/ENCFF547SJG/@@download/ENCFF547SJG.bed.gz GRCh38 released missing unfiltered alignments ENCFF450DFK bed narrowPeak conservative idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF266QUX, ENCFF419RSJ, ENCFF648FRJ, ENCFF658HYK 998715 ENCODE Processing Pipeline 39df8b81ccfe1cd1c048ee456cd8a9ec https://www.encodeproject.org/files/ENCFF450DFK/@@download/ENCFF450DFK.bed.gz GRCh38 released missing unfiltered alignments ENCFF648FRJ bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF002PNZ, ENCFF346SNT, ENCFF779PRW 7317100 ENCODE Processing Pipeline 73e98d2139add6336a99283ea6145222 https://www.encodeproject.org/files/ENCFF648FRJ/@@download/ENCFF648FRJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF441YTV bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF242UOG, ENCFF951SEJ 7188623 ENCODE Processing Pipeline 6ad9d97abd0b21bcd3a5d072ebdef340 https://www.encodeproject.org/files/ENCFF441YTV/@@download/ENCFF441YTV.bed.gz hg19 released missing unfiltered alignments ENCFF408FLA bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF014ABI, ENCFF242UOG 7154927 ENCODE Processing Pipeline 34514dcce76771f625e9a0f6c1b8e49e https://www.encodeproject.org/files/ENCFF408FLA/@@download/ENCFF408FLA.bed.gz hg19 released missing unfiltered alignments ENCFF828JWK bed narrowPeak optimal idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF408FLA, ENCFF441YTV, ENCFF519FSK 1173339 ENCODE Processing Pipeline 497b62adf65e7673d2d5bc8fa194a587 https://www.encodeproject.org/files/ENCFF828JWK/@@download/ENCFF828JWK.bed.gz hg19 released missing unfiltered alignments ENCFF519FSK bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF014ABI, ENCFF242UOG, ENCFF951SEJ 7330610 ENCODE Processing Pipeline b5ec04e6d7e8908d942922c35bb87cf8 https://www.encodeproject.org/files/ENCFF519FSK/@@download/ENCFF519FSK.bed.gz hg19 released missing unfiltered alignments ENCFF231HJU bed narrowPeak conservative idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF408FLA, ENCFF441YTV, ENCFF519FSK 989683 ENCODE Processing Pipeline 0925d905a9357d38186338a7bbe0d6a5 https://www.encodeproject.org/files/ENCFF231HJU/@@download/ENCFF231HJU.bed.gz hg19 released missing unfiltered alignments ENCFF575RVG bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF143UTJ, ENCFF930DZH 5377635 ENCODE Processing Pipeline 5a7b9d48c880acef56539f484bac771f https://www.encodeproject.org/files/ENCFF575RVG/@@download/ENCFF575RVG.bed.gz hg19 released missing unfiltered alignments ENCFF597WGL bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF143UTJ, ENCFF811OUA, ENCFF930DZH 6898473 ENCODE Processing Pipeline e49f7c3e1565644a28c7115c97376563 https://www.encodeproject.org/files/ENCFF597WGL/@@download/ENCFF597WGL.bed.gz hg19 released missing unfiltered alignments ENCFF225CMV bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF811OUA, ENCFF930DZH 6133241 ENCODE Processing Pipeline 61a68c1a03eaf0f52bcfe393211fd5ec https://www.encodeproject.org/files/ENCFF225CMV/@@download/ENCFF225CMV.bed.gz hg19 released missing unfiltered alignments ENCFF467UQI bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF498EFE 5168427 ENCODE Processing Pipeline 139e1651dd628ccb2ee1f77bbd149d11 https://www.encodeproject.org/files/ENCFF467UQI/@@download/ENCFF467UQI.bed.gz GRCh38 released missing unfiltered alignments ENCFF110CRQ bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF302OZO, ENCFF498EFE 6781330 ENCODE Processing Pipeline d799a164a6f25b8ec54a5fafc08dee77 https://www.encodeproject.org/files/ENCFF110CRQ/@@download/ENCFF110CRQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF410PQD bed narrowPeak conservative idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF110CRQ, ENCFF419RSJ, ENCFF467UQI, ENCFF500RYU 33274 ENCODE Processing Pipeline ed1684bba1d03a6d92db969ed1a008a7 https://www.encodeproject.org/files/ENCFF410PQD/@@download/ENCFF410PQD.bed.gz GRCh38 released missing unfiltered alignments ENCFF500RYU bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF302OZO 5924322 ENCODE Processing Pipeline 052f355498512b39faea6df973e48022 https://www.encodeproject.org/files/ENCFF500RYU/@@download/ENCFF500RYU.bed.gz GRCh38 released missing unfiltered alignments ENCFF265QXK bed narrowPeak optimal idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF110CRQ, ENCFF419RSJ, ENCFF467UQI, ENCFF500RYU 60234 ENCODE Processing Pipeline c176aa8d570ea5bfe905c412f1534b96 https://www.encodeproject.org/files/ENCFF265QXK/@@download/ENCFF265QXK.bed.gz GRCh38 released missing unfiltered alignments ENCFF494TFV bed narrowPeak conservative idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF225CMV, ENCFF575RVG, ENCFF597WGL 29058 ENCODE Processing Pipeline c4325f3320dcda06b9e1121d4f99f100 https://www.encodeproject.org/files/ENCFF494TFV/@@download/ENCFF494TFV.bed.gz hg19 released missing unfiltered alignments ENCFF036YVI bed narrowPeak optimal idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF225CMV, ENCFF575RVG, ENCFF597WGL 52645 ENCODE Processing Pipeline f353a61ba2e6c83a03f221aa38684c44 https://www.encodeproject.org/files/ENCFF036YVI/@@download/ENCFF036YVI.bed.gz hg19 released missing unfiltered alignments ENCFF001XST bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF001HTC 862203 John Stamatoyannopoulos, UW e8332ac71efe7497fe88b557ce628c9c https://www.encodeproject.org/files/ENCFF001XST/@@download/ENCFF001XST.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing unfiltered alignments insufficient read depth, poor library complexity, severe bottlenecking ENCFF001XSU bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF001HTD 601656 John Stamatoyannopoulos, UW ac9eb0f49655b416b767f25be87d0f8b https://www.encodeproject.org/files/ENCFF001XSU/@@download/ENCFF001XSU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing unfiltered alignments insufficient read depth, poor library complexity, severe bottlenecking ENCFF002DDJ bed narrowPeak optimal idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF001HTC, ENCFF001HTD 869756 ENCODE Consortium Analysis Working Group 8e9f23cdfc27292f8fc0f0b302cd296a https://www.encodeproject.org/files/ENCFF002DDJ/@@download/ENCFF002DDJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing unfiltered alignments insufficient read depth, poor library complexity, severe bottlenecking ENCFF248VAH bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF081HVQ 4106246 ENCODE Processing Pipeline 4836dbceb7f74afa2326b6f2eff23889 https://www.encodeproject.org/files/ENCFF248VAH/@@download/ENCFF248VAH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing unfiltered alignments insufficient read depth, poor library complexity, severe bottlenecking ENCFF075EWP bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF081HVQ, ENCFF494VZW 4464865 ENCODE Processing Pipeline b8db5b9fc22c7a7e92462c324c336ed6 https://www.encodeproject.org/files/ENCFF075EWP/@@download/ENCFF075EWP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing unfiltered alignments insufficient read depth, poor library complexity, severe bottlenecking ENCFF016NHU bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF494VZW 2729967 ENCODE Processing Pipeline cb4a3bfb3a222713f2274869d9bb937f https://www.encodeproject.org/files/ENCFF016NHU/@@download/ENCFF016NHU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing unfiltered alignments insufficient read depth, poor library complexity, severe bottlenecking ENCFF389ELU bed narrowPeak conservative idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF016NHU, ENCFF075EWP, ENCFF248VAH, ENCFF419RSJ 625017 ENCODE Processing Pipeline eab4a62407ecb1f4025aeed2f8011c85 https://www.encodeproject.org/files/ENCFF389ELU/@@download/ENCFF389ELU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing unfiltered alignments insufficient read depth, poor library complexity, severe bottlenecking ENCFF843VHC bed narrowPeak optimal idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF016NHU, ENCFF075EWP, ENCFF248VAH, ENCFF419RSJ 702428 ENCODE Processing Pipeline 58222b6f11836bebf802919942dd9933 https://www.encodeproject.org/files/ENCFF843VHC/@@download/ENCFF843VHC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing unfiltered alignments insufficient read depth, poor library complexity, severe bottlenecking ENCFF001VRL bed narrowPeak peaks ENCSR000DJX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1330450 Kevin White, UChicago 97c915f0ad3c41a65bf4d61458d07c9b https://www.encodeproject.org/files/ENCFF001VRL/@@download/ENCFF001VRL.bed.gz hg19 archived low read depth, low read length missing derived_from, mismatched file status ENCFF002DDZ bed narrowPeak optimal idr thresholded peaks ENCSR000DJX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 641106 ENCODE Consortium Analysis Working Group 0367fe66391eb886b08ee41a26b60788 https://www.encodeproject.org/files/ENCFF002DDZ/@@download/ENCFF002DDZ.bed.gz hg19 archived low read depth, low read length missing derived_from, mismatched file status ENCFF001UWO bed narrowPeak peaks ENCSR000EKR DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens sodium butyrate DNA see document see document False 2012-03-28 ENCODE 2080541 Gregory Crawford, Duke 01591de19fe952c7ee8f9f7bc3b6f138 https://www.encodeproject.org/files/ENCFF001UWO/@@download/ENCFF001UWO.bed.gz hg19 archived mixed read lengths, low spot score missing derived_from, mismatched file status, biological replicates with identical biosample insufficient replicate concordance extremely low spot score ENCFF002CMB bed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 128678 ENCODE Consortium Analysis Working Group fe645c91ac33d4e3222a007677d53650 https://www.encodeproject.org/files/ENCFF002CMB/@@download/ENCFF002CMB.bed.gz hg19 archived mild to moderate bottlenecking, low read length missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF002CMJ bed narrowPeak optimal idr thresholded peaks ENCSR000BGW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 551112 ENCODE Consortium Analysis Working Group e5deb59ab10ad4f9cf73e327a1094fd3 https://www.encodeproject.org/files/ENCFF002CMJ/@@download/ENCFF002CMJ.bed.gz hg19 released low read length missing derived_from, biological replicates with identical biosample ENCFF843JFL bed narrowPeak conservative idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF075DYV, ENCFF475TJT, ENCFF869BQK 576225 ENCODE Processing Pipeline 3c1385c9f42cd85df9747babe13ee964 https://www.encodeproject.org/files/ENCFF843JFL/@@download/ENCFF843JFL.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF075DYV bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF373IJK, ENCFF419SJQ 6482988 ENCODE Processing Pipeline b4263f8188f33604a937ef0883eb06a8 https://www.encodeproject.org/files/ENCFF075DYV/@@download/ENCFF075DYV.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF475TJT bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF373IJK, ENCFF419SJQ, ENCFF810SIO 7099157 ENCODE Processing Pipeline 2fca638f5fd9daa6551ef2d4d8c8309d https://www.encodeproject.org/files/ENCFF475TJT/@@download/ENCFF475TJT.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF869BQK bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF419SJQ, ENCFF810SIO 6589214 ENCODE Processing Pipeline b384399b73a3f804a294944539e1d43e https://www.encodeproject.org/files/ENCFF869BQK/@@download/ENCFF869BQK.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF168HAG bed narrowPeak optimal idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF075DYV, ENCFF475TJT, ENCFF869BQK 640919 ENCODE Processing Pipeline 2b8f415d6a0349fdfc57e3b592874f6a https://www.encodeproject.org/files/ENCFF168HAG/@@download/ENCFF168HAG.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF978TMB bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF177OCL, ENCFF577WGL 6361758 ENCODE Processing Pipeline 3e4f363a892bf0ba963f415a69f72397 https://www.encodeproject.org/files/ENCFF978TMB/@@download/ENCFF978TMB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF247CKB bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF177OCL, ENCFF616QUW 6502036 ENCODE Processing Pipeline 937f4d893f11be5f494452f393bf1db9 https://www.encodeproject.org/files/ENCFF247CKB/@@download/ENCFF247CKB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF679MAR bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF177OCL, ENCFF577WGL, ENCFF616QUW 7094989 ENCODE Processing Pipeline 9f2040f6084a9d186e469753a46173ff https://www.encodeproject.org/files/ENCFF679MAR/@@download/ENCFF679MAR.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF608GNP bed narrowPeak conservative idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF247CKB, ENCFF419RSJ, ENCFF679MAR, ENCFF978TMB 592909 ENCODE Processing Pipeline 19345ce586e6271022ecbe50e0bd5d1d https://www.encodeproject.org/files/ENCFF608GNP/@@download/ENCFF608GNP.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF685CMQ bed narrowPeak optimal idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF247CKB, ENCFF419RSJ, ENCFF679MAR, ENCFF978TMB 654021 ENCODE Processing Pipeline 2378aad048bf2262655ce86dae031382 https://www.encodeproject.org/files/ENCFF685CMQ/@@download/ENCFF685CMQ.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF001VMM bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 79217 Sherman Weissman, Yale 1d4d0d158f699f5cf4263fe5ad85e9a9 https://www.encodeproject.org/files/ENCFF001VMM/@@download/ENCFF001VMM.bed.gz hg19 archived mixed read lengths, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CWA bed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 183099 ENCODE Consortium Analysis Working Group 51f6da08d5b1a787ae904ac0bc01e2bc https://www.encodeproject.org/files/ENCFF002CWA/@@download/ENCFF002CWA.bed.gz hg19 archived mixed read lengths, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF144QMS bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF749RRI 1971851 ENCODE Processing Pipeline 99d446777be9c129bb2140ecaeadf9e3 https://www.encodeproject.org/files/ENCFF144QMS/@@download/ENCFF144QMS.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF291UMT bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF749RRI, ENCFF784MLU 4193394 ENCODE Processing Pipeline ac42bf04d7ad06505e7626a4995d4ecb https://www.encodeproject.org/files/ENCFF291UMT/@@download/ENCFF291UMT.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF563FUW bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF784MLU 2126899 ENCODE Processing Pipeline 60ddea27b8875f22a5a79a8107bbc8fc https://www.encodeproject.org/files/ENCFF563FUW/@@download/ENCFF563FUW.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF090VAI bed narrowPeak conservative idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF144QMS, ENCFF291UMT, ENCFF419RSJ, ENCFF563FUW 134294 ENCODE Processing Pipeline ce47e41581a9b76f924ca31202b81e87 https://www.encodeproject.org/files/ENCFF090VAI/@@download/ENCFF090VAI.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF167WUZ bed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF144QMS, ENCFF291UMT, ENCFF419RSJ, ENCFF563FUW 149656 ENCODE Processing Pipeline 12397850a41177f618070e26e9e89d28 https://www.encodeproject.org/files/ENCFF167WUZ/@@download/ENCFF167WUZ.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF015QFT bed narrowPeak conservative idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF076VIZ, ENCFF646NDI, ENCFF711IWR 130984 ENCODE Processing Pipeline ce0630e16c9b57d2a0cacf6fa3dd4b21 https://www.encodeproject.org/files/ENCFF015QFT/@@download/ENCFF015QFT.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF417QAJ bed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF076VIZ, ENCFF646NDI, ENCFF711IWR 149199 ENCODE Processing Pipeline 238b9e00469f275659c398777dc0f553 https://www.encodeproject.org/files/ENCFF417QAJ/@@download/ENCFF417QAJ.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF711IWR bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF978GBP 2129248 ENCODE Processing Pipeline 6544a6b0ba76e1f622f6e2ca2b5b305d https://www.encodeproject.org/files/ENCFF711IWR/@@download/ENCFF711IWR.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF646NDI bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF994JIB 1968931 ENCODE Processing Pipeline 8fa53b70dea97ab361bb124c40ed951e https://www.encodeproject.org/files/ENCFF646NDI/@@download/ENCFF646NDI.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF076VIZ bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF978GBP, ENCFF994JIB 4186013 ENCODE Processing Pipeline 26d16f09cf95235c9957076f45ddb7ac https://www.encodeproject.org/files/ENCFF076VIZ/@@download/ENCFF076VIZ.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CLW bed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 547340 ENCODE Consortium Analysis Working Group 7f45cf21d10df1bd05cc423854e7a79f https://www.encodeproject.org/files/ENCFF002CLW/@@download/ENCFF002CLW.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF914RGQ bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331TRC, ENCFF535PLW 5484339 ENCODE Processing Pipeline a14031581d0788f2eda7584f5fea43c6 https://www.encodeproject.org/files/ENCFF914RGQ/@@download/ENCFF914RGQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF617WYS bed narrowPeak conservative idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF373RYW, ENCFF419RSJ, ENCFF914RGQ, ENCFF940ZYR 276128 ENCODE Processing Pipeline 22af1e45992aaabb040e3d227c4300d0 https://www.encodeproject.org/files/ENCFF617WYS/@@download/ENCFF617WYS.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF463GCH bed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF373RYW, ENCFF419RSJ, ENCFF914RGQ, ENCFF940ZYR 569548 ENCODE Processing Pipeline 425ae520c266a3da61db4b1767c41189 https://www.encodeproject.org/files/ENCFF463GCH/@@download/ENCFF463GCH.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF373RYW bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331TRC 1718491 ENCODE Processing Pipeline 2ea02304fb23b1579258f43d988f1954 https://www.encodeproject.org/files/ENCFF373RYW/@@download/ENCFF373RYW.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF940ZYR bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF535PLW 5090410 ENCODE Processing Pipeline af49958ede7ca18fdc1a0dfe0afdcbbc https://www.encodeproject.org/files/ENCFF940ZYR/@@download/ENCFF940ZYR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking ENCFF002CMS bed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 69164 ENCODE Consortium Analysis Working Group 063d398298f51274e96c4d9e0cb76741 https://www.encodeproject.org/files/ENCFF002CMS/@@download/ENCFF002CMS.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF885BXV bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF518PIS, ENCFF772PJM 94123 ENCODE Processing Pipeline a6e58c04c994e4fa23083b2996b36cf5 https://www.encodeproject.org/files/ENCFF885BXV/@@download/ENCFF885BXV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF020JUH bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF126SXE, ENCFF518PIS, ENCFF772PJM 4746793 ENCODE Processing Pipeline dab4aba425eb3588b6db87887ad52b48 https://www.encodeproject.org/files/ENCFF020JUH/@@download/ENCFF020JUH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF824FNL bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF126SXE, ENCFF772PJM 197835 ENCODE Processing Pipeline 434c8469eefddfabcf849756288c9859 https://www.encodeproject.org/files/ENCFF824FNL/@@download/ENCFF824FNL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF270QLC bed narrowPeak conservative idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF020JUH, ENCFF419RSJ, ENCFF824FNL, ENCFF885BXV 7565 ENCODE Processing Pipeline 3bd5df735547bfb68148701d63779b78 https://www.encodeproject.org/files/ENCFF270QLC/@@download/ENCFF270QLC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF852NOL bed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF020JUH, ENCFF419RSJ, ENCFF824FNL, ENCFF885BXV 12435 ENCODE Processing Pipeline 5cf6d1f9a14bbdcedf73fff57d04e6fe https://www.encodeproject.org/files/ENCFF852NOL/@@download/ENCFF852NOL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF002CMN bed narrowPeak optimal idr thresholded peaks ENCSR000BKO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 175388 ENCODE Consortium Analysis Working Group ab813cc65787acdb2cdfafcb9522367a https://www.encodeproject.org/files/ENCFF002CMN/@@download/ENCFF002CMN.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF002CMD bed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 131373 ENCODE Consortium Analysis Working Group 86f7faf8431745bababf549e8455935e https://www.encodeproject.org/files/ENCFF002CMD/@@download/ENCFF002CMD.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF862SVA bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF401BQM, ENCFF850FRG 4334858 ENCODE Processing Pipeline 3498eb36e5e5745bbec797ed1ea4320d https://www.encodeproject.org/files/ENCFF862SVA/@@download/ENCFF862SVA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF190IHG bed narrowPeak conservative idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184QHH, ENCFF419RSJ, ENCFF862SVA, ENCFF894NFM 16950 ENCODE Processing Pipeline 15ab24e07bb44b0eb0172d59308cb5f2 https://www.encodeproject.org/files/ENCFF190IHG/@@download/ENCFF190IHG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF184QHH bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF850FRG 178380 ENCODE Processing Pipeline d35d70f9aa74853e1f345537054d9f28 https://www.encodeproject.org/files/ENCFF184QHH/@@download/ENCFF184QHH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF894NFM bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401BQM 128973 ENCODE Processing Pipeline 4b35f34c99006cc3973d8555e0f4eed1 https://www.encodeproject.org/files/ENCFF894NFM/@@download/ENCFF894NFM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF310SMW bed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184QHH, ENCFF419RSJ, ENCFF862SVA, ENCFF894NFM 23534 ENCODE Processing Pipeline e967915ab5610d1d6ed4def309ca49c1 https://www.encodeproject.org/files/ENCFF310SMW/@@download/ENCFF310SMW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF001VPM bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 47241 Peggy Farnham, USC de9000f06a3f75322cd7456ef370fb0e https://www.encodeproject.org/files/ENCFF001VPM/@@download/ENCFF001VPM.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYS bed narrowPeak optimal idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 63718 ENCODE Consortium Analysis Working Group 78068fe6a83e3950baf4430d38749f04 https://www.encodeproject.org/files/ENCFF002CYS/@@download/ENCFF002CYS.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF888KVA bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF094FZQ, ENCFF355SGP, ENCFF891GFG 5735739 ENCODE Processing Pipeline 227a36a7d0329d1261b53c42a94f920d https://www.encodeproject.org/files/ENCFF888KVA/@@download/ENCFF888KVA.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF592UVR bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF094FZQ, ENCFF355SGP 3374152 ENCODE Processing Pipeline 6385ee0e480656089d579e10fb5b6418 https://www.encodeproject.org/files/ENCFF592UVR/@@download/ENCFF592UVR.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF609SJE bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF891GFG 3963342 ENCODE Processing Pipeline e4ccab66aaa93ca0c41248d590eba94f https://www.encodeproject.org/files/ENCFF609SJE/@@download/ENCFF609SJE.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF607PKH bed narrowPeak conservative idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF592UVR, ENCFF609SJE, ENCFF888KVA 65842 ENCODE Processing Pipeline 87ab138464b1f3a9d4db7651896f8565 https://www.encodeproject.org/files/ENCFF607PKH/@@download/ENCFF607PKH.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF579ETM bed narrowPeak optimal idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF592UVR, ENCFF609SJE, ENCFF888KVA 67789 ENCODE Processing Pipeline b6c38bae2ef61a659aadf55b977a891a https://www.encodeproject.org/files/ENCFF579ETM/@@download/ENCFF579ETM.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF051FKL bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF362BFL 3582959 ENCODE Processing Pipeline d37e6204205236600c1cd7fc27b279c0 https://www.encodeproject.org/files/ENCFF051FKL/@@download/ENCFF051FKL.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF100FXA bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF221GJM 4035379 ENCODE Processing Pipeline c3ae106011943b7122e307a0f977bc5b https://www.encodeproject.org/files/ENCFF100FXA/@@download/ENCFF100FXA.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF537UES bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF221GJM, ENCFF362BFL 5931174 ENCODE Processing Pipeline dabddf6f455929722bd64e2fc6242da2 https://www.encodeproject.org/files/ENCFF537UES/@@download/ENCFF537UES.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF891MVM bed narrowPeak conservative idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF051FKL, ENCFF100FXA, ENCFF537UES 67975 ENCODE Processing Pipeline 6f1947b757a7ffc01cf96e02420dce62 https://www.encodeproject.org/files/ENCFF891MVM/@@download/ENCFF891MVM.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF487JYD bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF053ULL, ENCFF804GZU 6198220 ENCODE Processing Pipeline 149c202090cd8c1452ad189901f54d15 https://www.encodeproject.org/files/ENCFF487JYD/@@download/ENCFF487JYD.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF423GZH bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF053ULL, ENCFF500GNW 6055436 ENCODE Processing Pipeline 6b81da2f832fd3de56ca5db061472997 https://www.encodeproject.org/files/ENCFF423GZH/@@download/ENCFF423GZH.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF590NAP bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF053ULL, ENCFF500GNW, ENCFF804GZU 6747513 ENCODE Processing Pipeline 5f5dfbcf75ed5937e8532fe3b8b44953 https://www.encodeproject.org/files/ENCFF590NAP/@@download/ENCFF590NAP.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF867DSB bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF680KUB, ENCFF757TIT 6565491 ENCODE Processing Pipeline e6bbcd9c0153dcdd1046f08a4f1d64bd https://www.encodeproject.org/files/ENCFF867DSB/@@download/ENCFF867DSB.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF022NSD bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF757TIT 5860452 ENCODE Processing Pipeline f1164658831219149c3f9f05cd436562 https://www.encodeproject.org/files/ENCFF022NSD/@@download/ENCFF022NSD.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF572OWY bed narrowPeak optimal idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF022NSD, ENCFF419RSJ, ENCFF593LGK, ENCFF867DSB 473778 ENCODE Processing Pipeline 80a1eb3e913e8186076f68b3dc53905b https://www.encodeproject.org/files/ENCFF572OWY/@@download/ENCFF572OWY.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF593LGK bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF680KUB 5945742 ENCODE Processing Pipeline 555b9912348b75042f6fc92936e5f796 https://www.encodeproject.org/files/ENCFF593LGK/@@download/ENCFF593LGK.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF709IUJ bed narrowPeak conservative idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF022NSD, ENCFF419RSJ, ENCFF593LGK, ENCFF867DSB 470038 ENCODE Processing Pipeline 5dcd831928ffef01b05fbd2b54e2d844 https://www.encodeproject.org/files/ENCFF709IUJ/@@download/ENCFF709IUJ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF575JXW bed narrowPeak conservative idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF423GZH, ENCFF487JYD, ENCFF590NAP 414991 ENCODE Processing Pipeline 2e9780b666c281818fe50560613fe84b https://www.encodeproject.org/files/ENCFF575JXW/@@download/ENCFF575JXW.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF433RKB bed narrowPeak optimal idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF423GZH, ENCFF487JYD, ENCFF590NAP 422337 ENCODE Processing Pipeline f5ce515799a684a69f3d908d6f5358e2 https://www.encodeproject.org/files/ENCFF433RKB/@@download/ENCFF433RKB.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF688MMW bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF497VZQ, ENCFF563IAT 5858657 ENCODE Processing Pipeline b9c42852aa5db77e1422ac3c1df2bbec https://www.encodeproject.org/files/ENCFF688MMW/@@download/ENCFF688MMW.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF619AGT bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF497VZQ, ENCFF563IAT, ENCFF653FYP 6927837 ENCODE Processing Pipeline 8bf620519d530be30c82f578f33efa34 https://www.encodeproject.org/files/ENCFF619AGT/@@download/ENCFF619AGT.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF140CQS bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF563IAT, ENCFF653FYP 6409945 ENCODE Processing Pipeline 371379ba667695673065ea92fcceb6d7 https://www.encodeproject.org/files/ENCFF140CQS/@@download/ENCFF140CQS.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF759YKT bed narrowPeak conservative idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF140CQS, ENCFF619AGT, ENCFF688MMW 688659 ENCODE Processing Pipeline f3e4c6b726db91d636dee4edc466ca59 https://www.encodeproject.org/files/ENCFF759YKT/@@download/ENCFF759YKT.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF911VSD bed narrowPeak optimal idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF140CQS, ENCFF619AGT, ENCFF688MMW 793523 ENCODE Processing Pipeline d730a03d8ebbaaa61fa7df7a259778da https://www.encodeproject.org/files/ENCFF911VSD/@@download/ENCFF911VSD.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF795DQU bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF886VAQ, ENCFF945TUI 5618788 ENCODE Processing Pipeline f8a00f68846e786b04d11419a9a91bbf https://www.encodeproject.org/files/ENCFF795DQU/@@download/ENCFF795DQU.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF692VLU bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF581SOT, ENCFF886VAQ 6299551 ENCODE Processing Pipeline 3bf1dd5b553fc4d9c52039b664557cb8 https://www.encodeproject.org/files/ENCFF692VLU/@@download/ENCFF692VLU.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF290DPG bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF581SOT, ENCFF886VAQ, ENCFF945TUI 6828034 ENCODE Processing Pipeline 13461c10a9df7863d2d0e0148a4c8583 https://www.encodeproject.org/files/ENCFF290DPG/@@download/ENCFF290DPG.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF286HTI bed narrowPeak optimal idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF290DPG, ENCFF419RSJ, ENCFF692VLU, ENCFF795DQU 790918 ENCODE Processing Pipeline cea53b76d4303d99def897be661dcfcf https://www.encodeproject.org/files/ENCFF286HTI/@@download/ENCFF286HTI.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF769VDQ bed narrowPeak conservative idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF290DPG, ENCFF419RSJ, ENCFF692VLU, ENCFF795DQU 688712 ENCODE Processing Pipeline a6f9817e90d1623c30dc4edc38850979 https://www.encodeproject.org/files/ENCFF769VDQ/@@download/ENCFF769VDQ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF839IXS bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF266VDG, ENCFF508ZDE 6931086 ENCODE Processing Pipeline 8fe562fb6aaa19115d0302efb4fe971e https://www.encodeproject.org/files/ENCFF839IXS/@@download/ENCFF839IXS.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF603LKQ bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF266VDG, ENCFF473TXL 7251822 ENCODE Processing Pipeline a4ffb0ad4ba13a89b18dbdf27735fbf2 https://www.encodeproject.org/files/ENCFF603LKQ/@@download/ENCFF603LKQ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF234TBD bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF266VDG, ENCFF473TXL, ENCFF508ZDE 7326429 ENCODE Processing Pipeline fcabb37727935fcfa29107e5fa7be922 https://www.encodeproject.org/files/ENCFF234TBD/@@download/ENCFF234TBD.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF430VKO bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF228COG, ENCFF811CBJ 6766996 ENCODE Processing Pipeline 8bee2bbf93f7a7cafc6066963ef7d776 https://www.encodeproject.org/files/ENCFF430VKO/@@download/ENCFF430VKO.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF161HQY bed narrowPeak conservative idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF430VKO, ENCFF570SZP, ENCFF849NZN 166554 ENCODE Processing Pipeline c175dfd706b74d424680b547899b9fd1 https://www.encodeproject.org/files/ENCFF161HQY/@@download/ENCFF161HQY.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF849NZN bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF228COG, ENCFF413VAR 7165845 ENCODE Processing Pipeline aba382f51e9a7cf5086dd2dafb4d373f https://www.encodeproject.org/files/ENCFF849NZN/@@download/ENCFF849NZN.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF570SZP bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF228COG, ENCFF413VAR, ENCFF811CBJ 7288416 ENCODE Processing Pipeline eca6968170fa32a7d2dc5df8decce44b https://www.encodeproject.org/files/ENCFF570SZP/@@download/ENCFF570SZP.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF648HOK bed narrowPeak optimal idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF430VKO, ENCFF570SZP, ENCFF849NZN 213653 ENCODE Processing Pipeline 1aa554ff2ac7994786b4decb81308679 https://www.encodeproject.org/files/ENCFF648HOK/@@download/ENCFF648HOK.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF115ZHW bed narrowPeak conservative idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF234TBD, ENCFF603LKQ, ENCFF839IXS 131928 ENCODE Processing Pipeline 208e7ad0aae49e44f9e58beff4c86991 https://www.encodeproject.org/files/ENCFF115ZHW/@@download/ENCFF115ZHW.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF529FWJ bed narrowPeak optimal idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF234TBD, ENCFF603LKQ, ENCFF839IXS 176626 ENCODE Processing Pipeline 7207f9b5dcf5b4248227451b79664f04 https://www.encodeproject.org/files/ENCFF529FWJ/@@download/ENCFF529FWJ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF416FBH bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD 6354589 ENCODE Processing Pipeline 9838d379404171f2fb9406628afb8ef6 https://www.encodeproject.org/files/ENCFF416FBH/@@download/ENCFF416FBH.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF929FJI bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 5900193 ENCODE Processing Pipeline cfbcf03baa291b99beb93586aa3f37cd https://www.encodeproject.org/files/ENCFF929FJI/@@download/ENCFF929FJI.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF429ZJG bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 6721454 ENCODE Processing Pipeline f11c47d20371228932e49a1b4b9c3ef5 https://www.encodeproject.org/files/ENCFF429ZJG/@@download/ENCFF429ZJG.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF719KST bed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF416FBH, ENCFF429ZJG, ENCFF929FJI 111600 ENCODE Processing Pipeline 95a7f52d4d77b88ebefe468566d3a599 https://www.encodeproject.org/files/ENCFF719KST/@@download/ENCFF719KST.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF434QZL bed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF416FBH, ENCFF429ZJG, ENCFF929FJI 128593 ENCODE Processing Pipeline 4f90e8cc9263cacf63e92bbbf564133f https://www.encodeproject.org/files/ENCFF434QZL/@@download/ENCFF434QZL.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF486YBJ bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF290MEZ 5728178 ENCODE Processing Pipeline 0e7310b6996bb7f29f30cb9eddcaccf0 https://www.encodeproject.org/files/ENCFF486YBJ/@@download/ENCFF486YBJ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF737CGV bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF290MEZ, ENCFF544ZPF 6557854 ENCODE Processing Pipeline 43cd66592b1c67a3296893c809fe7113 https://www.encodeproject.org/files/ENCFF737CGV/@@download/ENCFF737CGV.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF983RQW bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF544ZPF 6138545 ENCODE Processing Pipeline 201862c3d0457ae2cb4193b5c8341565 https://www.encodeproject.org/files/ENCFF983RQW/@@download/ENCFF983RQW.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF059AZP bed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF486YBJ, ENCFF737CGV, ENCFF983RQW 112313 ENCODE Processing Pipeline 5b315df459532cd4d767e2dc11387fb2 https://www.encodeproject.org/files/ENCFF059AZP/@@download/ENCFF059AZP.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF913HCQ bed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF486YBJ, ENCFF737CGV, ENCFF983RQW 132646 ENCODE Processing Pipeline b70784948dfa6357fa0dc16a2d1d4dc2 https://www.encodeproject.org/files/ENCFF913HCQ/@@download/ENCFF913HCQ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF001VNJ bed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 11198 Michael Snyder, Stanford 566bc3cbb717536c65406705379f91c9 https://www.encodeproject.org/files/ENCFF001VNJ/@@download/ENCFF001VNJ.bed.gz hg19 released low read depth missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read length ENCFF002CWU bed narrowPeak optimal idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 38158 ENCODE Consortium Analysis Working Group e6499640822783d31c0238b31687b4fa https://www.encodeproject.org/files/ENCFF002CWU/@@download/ENCFF002CWU.bed.gz hg19 released low read depth missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read length ENCFF001VOF bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 268652 Michael Snyder, Stanford 0e1e4bcfbc9143d6da9027890b928bf0 https://www.encodeproject.org/files/ENCFF001VOF/@@download/ENCFF001VOF.bed.gz hg19 archived mixed read lengths, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CXO bed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 369857 ENCODE Consortium Analysis Working Group eeb2549b268c9ec76e97ce900cdb85cc https://www.encodeproject.org/files/ENCFF002CXO/@@download/ENCFF002CXO.bed.gz hg19 archived mixed read lengths, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF730DLS bed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF152QPA, ENCFF419RSJ, ENCFF549VGN, ENCFF562TUU 400191 ENCODE Processing Pipeline 6703f2ed1b6467c0fb8f7151d30b608b https://www.encodeproject.org/files/ENCFF730DLS/@@download/ENCFF730DLS.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF152QPA bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF914ABF 3684784 ENCODE Processing Pipeline 04275d19a6c70caac1ace9ee8a75288a https://www.encodeproject.org/files/ENCFF152QPA/@@download/ENCFF152QPA.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF562TUU bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF548NQU, ENCFF914ABF 5887178 ENCODE Processing Pipeline a42bf7d1dac8e7925d053e72ba627dd3 https://www.encodeproject.org/files/ENCFF562TUU/@@download/ENCFF562TUU.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF365NCW bed narrowPeak conservative idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF152QPA, ENCFF419RSJ, ENCFF549VGN, ENCFF562TUU 350824 ENCODE Processing Pipeline da078730dc74993b85a4697d3365beaa https://www.encodeproject.org/files/ENCFF365NCW/@@download/ENCFF365NCW.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF549VGN bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF548NQU 5437878 ENCODE Processing Pipeline 3871b175f6f083ff4973d0cd0d3f5795 https://www.encodeproject.org/files/ENCFF549VGN/@@download/ENCFF549VGN.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF050JYN bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF743JWE 3663233 ENCODE Processing Pipeline 1017df22cef1ab3d6851b3a7962ed2fd https://www.encodeproject.org/files/ENCFF050JYN/@@download/ENCFF050JYN.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF278XFP bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF583QFG 5443236 ENCODE Processing Pipeline 5cc4ac63006cbb2586c6108c05a5b363 https://www.encodeproject.org/files/ENCFF278XFP/@@download/ENCFF278XFP.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF275TFD bed narrowPeak conservative idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF050JYN, ENCFF188QEA, ENCFF278XFP 351743 ENCODE Processing Pipeline 8325055489c2c9a56dde3da122effc74 https://www.encodeproject.org/files/ENCFF275TFD/@@download/ENCFF275TFD.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF270QAB bed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF050JYN, ENCFF188QEA, ENCFF278XFP 400425 ENCODE Processing Pipeline 932fe48d98f71d06e962f09468c47775 https://www.encodeproject.org/files/ENCFF270QAB/@@download/ENCFF270QAB.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF188QEA bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF583QFG, ENCFF743JWE 5889292 ENCODE Processing Pipeline 594dec0c561ac61635170ca86192f653 https://www.encodeproject.org/files/ENCFF188QEA/@@download/ENCFF188QEA.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF438LLN bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF277XXK, ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 6963927 ENCODE Processing Pipeline 8da2c2417956aedccde0b15abe913175 https://www.encodeproject.org/files/ENCFF438LLN/@@download/ENCFF438LLN.bed.gz hg19 released antibody characterized with exemption, mixed read lengths ENCFF988WAF bed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF204QNV, ENCFF438LLN, ENCFF925VOV 587450 ENCODE Processing Pipeline 00e2911c430ac59c84433e36a0a49b18 https://www.encodeproject.org/files/ENCFF988WAF/@@download/ENCFF988WAF.bed.gz hg19 released antibody characterized with exemption, mixed read lengths ENCFF204QNV bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 6492911 ENCODE Processing Pipeline 9de266ebdbe9e0035b2c922738642fcf https://www.encodeproject.org/files/ENCFF204QNV/@@download/ENCFF204QNV.bed.gz hg19 released antibody characterized with exemption, mixed read lengths ENCFF925VOV bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF277XXK, ENCFF454QBD, ENCFF847YDJ 6133457 ENCODE Processing Pipeline 225a6eb7aa177f322f26910ce442b90d https://www.encodeproject.org/files/ENCFF925VOV/@@download/ENCFF925VOV.bed.gz hg19 released antibody characterized with exemption, mixed read lengths ENCFF511QHY bed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF204QNV, ENCFF438LLN, ENCFF925VOV 668402 ENCODE Processing Pipeline 2a540d117bdccfec94aa0f5dc33dc677 https://www.encodeproject.org/files/ENCFF511QHY/@@download/ENCFF511QHY.bed.gz hg19 released antibody characterized with exemption, mixed read lengths ENCFF854LEH bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF056HVT 6339723 ENCODE Processing Pipeline 88121965170dc85fbd7057b07039001c https://www.encodeproject.org/files/ENCFF854LEH/@@download/ENCFF854LEH.bed.gz GRCh38 released antibody characterized with exemption, mixed read lengths ENCFF974TEI bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF900QPQ 5990521 ENCODE Processing Pipeline 5f9413804d50a7ae7c224968c18f34c8 https://www.encodeproject.org/files/ENCFF974TEI/@@download/ENCFF974TEI.bed.gz GRCh38 released antibody characterized with exemption, mixed read lengths ENCFF211PSS bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF056HVT, ENCFF900QPQ 6866642 ENCODE Processing Pipeline 0bbab442c1d8d0f96f2e28a07215d854 https://www.encodeproject.org/files/ENCFF211PSS/@@download/ENCFF211PSS.bed.gz GRCh38 released antibody characterized with exemption, mixed read lengths ENCFF429TTF bed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF211PSS, ENCFF419RSJ, ENCFF854LEH, ENCFF974TEI 585763 ENCODE Processing Pipeline 0f170d7b83a83f5e6232e5f2c409832d https://www.encodeproject.org/files/ENCFF429TTF/@@download/ENCFF429TTF.bed.gz GRCh38 released antibody characterized with exemption, mixed read lengths ENCFF195IFB bed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF211PSS, ENCFF419RSJ, ENCFF854LEH, ENCFF974TEI 670081 ENCODE Processing Pipeline baaa2bdfb02d2094530f3826d8684ed1 https://www.encodeproject.org/files/ENCFF195IFB/@@download/ENCFF195IFB.bed.gz GRCh38 released antibody characterized with exemption, mixed read lengths ENCFF281ART bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF228QPG, ENCFF319TDX 7026067 ENCODE Processing Pipeline 5490a96c5eee9cf6b27d1b2931a9ab2e https://www.encodeproject.org/files/ENCFF281ART/@@download/ENCFF281ART.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF435TZX bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF102OVJ, ENCFF228QPG, ENCFF319TDX 7276549 ENCODE Processing Pipeline e0a6d3e9fb1237aa90a5a3577bbb95dd https://www.encodeproject.org/files/ENCFF435TZX/@@download/ENCFF435TZX.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF228PSB bed narrowPeak optimal idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF281ART, ENCFF303DKR, ENCFF435TZX 799671 ENCODE Processing Pipeline 054f28f450d6d4e35a9993fce120ae4c https://www.encodeproject.org/files/ENCFF228PSB/@@download/ENCFF228PSB.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF303DKR bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF102OVJ, ENCFF319TDX 6737397 ENCODE Processing Pipeline f3f8b4ff33716b5a73ff5585e6f524b9 https://www.encodeproject.org/files/ENCFF303DKR/@@download/ENCFF303DKR.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF820BLL bed narrowPeak conservative idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF281ART, ENCFF303DKR, ENCFF435TZX 792908 ENCODE Processing Pipeline 98698eff66ac0dfe6cd233f833c610fb https://www.encodeproject.org/files/ENCFF820BLL/@@download/ENCFF820BLL.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF894JDF bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF938FQC 6659004 ENCODE Processing Pipeline af0b364522bac11653f5e232ec27a7d6 https://www.encodeproject.org/files/ENCFF894JDF/@@download/ENCFF894JDF.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF265AHI bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF327XSI, ENCFF938FQC 7216997 ENCODE Processing Pipeline 9bfdb9e00388daacc7d9330060983115 https://www.encodeproject.org/files/ENCFF265AHI/@@download/ENCFF265AHI.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF492ZNK bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF327XSI 6947208 ENCODE Processing Pipeline 39ee85589bc2498b59bd34e10c3e0d93 https://www.encodeproject.org/files/ENCFF492ZNK/@@download/ENCFF492ZNK.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF419WTZ bed narrowPeak optimal idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF265AHI, ENCFF419RSJ, ENCFF492ZNK, ENCFF894JDF 795933 ENCODE Processing Pipeline db80ad0dec4830532fc99a3350ab1b37 https://www.encodeproject.org/files/ENCFF419WTZ/@@download/ENCFF419WTZ.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF605TNJ bed narrowPeak conservative idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF265AHI, ENCFF419RSJ, ENCFF492ZNK, ENCFF894JDF 784161 ENCODE Processing Pipeline ed5636e4b4934f3ba5a5caf3db0b27ec https://www.encodeproject.org/files/ENCFF605TNJ/@@download/ENCFF605TNJ.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF002CMR bed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 312494 ENCODE Consortium Analysis Working Group c9a0dad556d6b26898d8aea60ac58f32 https://www.encodeproject.org/files/ENCFF002CMR/@@download/ENCFF002CMR.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF760KTM bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF025QKV, ENCFF919HAZ 4565728 ENCODE Processing Pipeline 1a317530dbe1ef4c851ce2ce8fae8212 https://www.encodeproject.org/files/ENCFF760KTM/@@download/ENCFF760KTM.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF290PQH bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF025QKV 2258635 ENCODE Processing Pipeline 4100b0aeb8295dfa020b3742d80b3620 https://www.encodeproject.org/files/ENCFF290PQH/@@download/ENCFF290PQH.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF637RHV bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF919HAZ 2384040 ENCODE Processing Pipeline e8ed28288299a7392c8159d5619ae412 https://www.encodeproject.org/files/ENCFF637RHV/@@download/ENCFF637RHV.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF937JNR bed narrowPeak conservative idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF290PQH, ENCFF419RSJ, ENCFF637RHV, ENCFF760KTM 311356 ENCODE Processing Pipeline 7545ae3ad70aaff5881a8b832b325fea https://www.encodeproject.org/files/ENCFF937JNR/@@download/ENCFF937JNR.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF453TIB bed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF290PQH, ENCFF419RSJ, ENCFF637RHV, ENCFF760KTM 320021 ENCODE Processing Pipeline fb8f377ae4ee66faf20bbc08f92960dc https://www.encodeproject.org/files/ENCFF453TIB/@@download/ENCFF453TIB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF285LKH bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF160VXC, ENCFF327GHK, ENCFF834TUP 6837520 ENCODE Processing Pipeline 79ea0c0bf9dea9f99781d0a485899deb https://www.encodeproject.org/files/ENCFF285LKH/@@download/ENCFF285LKH.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF549VOY bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF494NSZ, ENCFF834TUP 6317672 ENCODE Processing Pipeline 509ed1052051da43fe4fb739e335d00f https://www.encodeproject.org/files/ENCFF549VOY/@@download/ENCFF549VOY.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF407JTS bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF160VXC, ENCFF327GHK, ENCFF494NSZ, ENCFF834TUP 7223483 ENCODE Processing Pipeline cc3655f625f6cb14c1164987c83545d1 https://www.encodeproject.org/files/ENCFF407JTS/@@download/ENCFF407JTS.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF092GNI bed narrowPeak conservative idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF001TDO, ENCFF285LKH, ENCFF407JTS, ENCFF549VOY 1006 ENCODE Processing Pipeline adedc8be7cf75f5bd62dd37894163ab4 https://www.encodeproject.org/files/ENCFF092GNI/@@download/ENCFF092GNI.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF684MLP bed narrowPeak optimal idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF001TDO, ENCFF285LKH, ENCFF407JTS, ENCFF549VOY 2643 ENCODE Processing Pipeline 2044df5f64a51f66c629269a417138c3 https://www.encodeproject.org/files/ENCFF684MLP/@@download/ENCFF684MLP.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF622EZH bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF423MBY 6057544 ENCODE Processing Pipeline c7a64bb30cabc10412bf2a5f236948c0 https://www.encodeproject.org/files/ENCFF622EZH/@@download/ENCFF622EZH.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF058FSO bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF307UCL 6739760 ENCODE Processing Pipeline 9500af3d46dba2d519e16d15e3392506 https://www.encodeproject.org/files/ENCFF058FSO/@@download/ENCFF058FSO.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF887WEF bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF307UCL, ENCFF423MBY 7191289 ENCODE Processing Pipeline b34e7cabe7360ee57d195e227a68c6f4 https://www.encodeproject.org/files/ENCFF887WEF/@@download/ENCFF887WEF.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF059THO bed narrowPeak conservative idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF058FSO, ENCFF419RSJ, ENCFF622EZH, ENCFF887WEF 1334 ENCODE Processing Pipeline 6dbbc2b69076d4d0501140a63d450f18 https://www.encodeproject.org/files/ENCFF059THO/@@download/ENCFF059THO.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF552EBC bed narrowPeak optimal idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF058FSO, ENCFF419RSJ, ENCFF622EZH, ENCFF887WEF 2809 ENCODE Processing Pipeline 436543136748f9d0edf5851f8ca91c2c https://www.encodeproject.org/files/ENCFF552EBC/@@download/ENCFF552EBC.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF220RNG bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF107MLR, ENCFF252CHQ 6606473 ENCODE Processing Pipeline 43932076034d45a823611b45b7834918 https://www.encodeproject.org/files/ENCFF220RNG/@@download/ENCFF220RNG.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF867FAH bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF252CHQ, ENCFF301KAZ 6432766 ENCODE Processing Pipeline 9f722049e31e1819e6720a49090a9aea https://www.encodeproject.org/files/ENCFF867FAH/@@download/ENCFF867FAH.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF690UHD bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF107MLR, ENCFF252CHQ, ENCFF301KAZ 7204826 ENCODE Processing Pipeline 049afae9508ac7be86a5e93e1e645d93 https://www.encodeproject.org/files/ENCFF690UHD/@@download/ENCFF690UHD.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF216QWU bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF285FGV 6455792 ENCODE Processing Pipeline f5f97d0e5db99572e6c1b0b0b5ff25d9 https://www.encodeproject.org/files/ENCFF216QWU/@@download/ENCFF216QWU.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF033BMM bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF997BDJ 6272804 ENCODE Processing Pipeline 32c7f37fb807b89f0e4e26f5db0d6c19 https://www.encodeproject.org/files/ENCFF033BMM/@@download/ENCFF033BMM.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF349GBE bed narrowPeak optimal idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF033BMM, ENCFF216QWU, ENCFF419RSJ, ENCFF914ZXX 190898 ENCODE Processing Pipeline 26187d9ca672df310af6a379ceb8ab02 https://www.encodeproject.org/files/ENCFF349GBE/@@download/ENCFF349GBE.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF489ZXV bed narrowPeak conservative idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF033BMM, ENCFF216QWU, ENCFF419RSJ, ENCFF914ZXX 125559 ENCODE Processing Pipeline b0aad1903b66df79384adc9aeefde087 https://www.encodeproject.org/files/ENCFF489ZXV/@@download/ENCFF489ZXV.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF914ZXX bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF285FGV, ENCFF997BDJ 7147258 ENCODE Processing Pipeline c69b73bcf4729b550a0aafa41f2ecfe8 https://www.encodeproject.org/files/ENCFF914ZXX/@@download/ENCFF914ZXX.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF939ZFS bed narrowPeak optimal idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF220RNG, ENCFF690UHD, ENCFF867FAH 151716 ENCODE Processing Pipeline a6a46e86e184939dd243d3fdf746998a https://www.encodeproject.org/files/ENCFF939ZFS/@@download/ENCFF939ZFS.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF531QQR bed narrowPeak conservative idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF220RNG, ENCFF690UHD, ENCFF867FAH 100665 ENCODE Processing Pipeline b137a79da588cfb9e64ca67ee265043d https://www.encodeproject.org/files/ENCFF531QQR/@@download/ENCFF531QQR.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF002CLP bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 87373 ENCODE Consortium Analysis Working Group 84b23b96b527536feaeb011ecb3ad402 https://www.encodeproject.org/files/ENCFF002CLP/@@download/ENCFF002CLP.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length missing derived_from, biological replicates with identical biosample ENCFF185HLZ bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144FIS, ENCFF477WUN, ENCFF750MIM 4909274 ENCODE Processing Pipeline 5f04cd4551c1346375f9e1b5209e8658 https://www.encodeproject.org/files/ENCFF185HLZ/@@download/ENCFF185HLZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length biological replicates with identical biosample ENCFF674BPH bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF144FIS, ENCFF750MIM 755262 ENCODE Processing Pipeline 0dd0eeeb0b8df3d7fc9612b201349848 https://www.encodeproject.org/files/ENCFF674BPH/@@download/ENCFF674BPH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length biological replicates with identical biosample ENCFF650YKB bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF477WUN, ENCFF750MIM 3690353 ENCODE Processing Pipeline d43b5690540dd71c1b9f817ded4a79c2 https://www.encodeproject.org/files/ENCFF650YKB/@@download/ENCFF650YKB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length biological replicates with identical biosample ENCFF203EDM bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF185HLZ, ENCFF650YKB, ENCFF674BPH 40925 ENCODE Processing Pipeline 3946dde3684d502243421593940f2481 https://www.encodeproject.org/files/ENCFF203EDM/@@download/ENCFF203EDM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length biological replicates with identical biosample ENCFF021MAG bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339YBR, ENCFF772PJM 740067 ENCODE Processing Pipeline 1868d284f096224a23cac87210ff9ae3 https://www.encodeproject.org/files/ENCFF021MAG/@@download/ENCFF021MAG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length biological replicates with identical biosample ENCFF569NCI bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF554KEG, ENCFF772PJM 3688898 ENCODE Processing Pipeline aeaf21a2c7cabb34d3867058626708c2 https://www.encodeproject.org/files/ENCFF569NCI/@@download/ENCFF569NCI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length biological replicates with identical biosample ENCFF973HTC bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF339YBR, ENCFF554KEG, ENCFF772PJM 4902942 ENCODE Processing Pipeline b88af5fd25ed5478d6473a9d08af76e3 https://www.encodeproject.org/files/ENCFF973HTC/@@download/ENCFF973HTC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length biological replicates with identical biosample ENCFF496YJC bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021MAG, ENCFF419RSJ, ENCFF569NCI, ENCFF973HTC 39755 ENCODE Processing Pipeline f1fc3159c8dc7811416c2320108d41bb https://www.encodeproject.org/files/ENCFF496YJC/@@download/ENCFF496YJC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length biological replicates with identical biosample ENCFF149RWE bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF050VHP 6108809 ENCODE Processing Pipeline 6109305575c2038a9ac763bc2601ca60 https://www.encodeproject.org/files/ENCFF149RWE/@@download/ENCFF149RWE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF704BJM bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF050VHP, ENCFF323OVV 6825762 ENCODE Processing Pipeline 60bd65ba180ed945738f9c9a301fbd09 https://www.encodeproject.org/files/ENCFF704BJM/@@download/ENCFF704BJM.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF179STO bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF323OVV 5345337 ENCODE Processing Pipeline 91f2d2ae76bd5a625dd9df8faedc3de1 https://www.encodeproject.org/files/ENCFF179STO/@@download/ENCFF179STO.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF892JRL bed narrowPeak conservative idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF149RWE, ENCFF179STO, ENCFF419RSJ, ENCFF704BJM 140262 ENCODE Processing Pipeline f1edede9343904bb8493f30cd8856353 https://www.encodeproject.org/files/ENCFF892JRL/@@download/ENCFF892JRL.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF543INR bed narrowPeak optimal idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF149RWE, ENCFF179STO, ENCFF419RSJ, ENCFF704BJM 185965 ENCODE Processing Pipeline 0807855b6152ba7abf613dc780f4056b https://www.encodeproject.org/files/ENCFF543INR/@@download/ENCFF543INR.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF004IKJ bed narrowPeak conservative idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF001TDO, ENCFF197DMK, ENCFF251WTS, ENCFF901YWM 138381 ENCODE Processing Pipeline fa45d1dec52953777e82144dfba0cb63 https://www.encodeproject.org/files/ENCFF004IKJ/@@download/ENCFF004IKJ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF901YWM bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF160VXC, ENCFF514PZW 5344856 ENCODE Processing Pipeline 113821c7722aea3564c1cdcf523ba6b4 https://www.encodeproject.org/files/ENCFF901YWM/@@download/ENCFF901YWM.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF251WTS bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF581FCG, ENCFF834TUP 6169947 ENCODE Processing Pipeline 6957338f2ef6045cc9d16ab633b71c0b https://www.encodeproject.org/files/ENCFF251WTS/@@download/ENCFF251WTS.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF197DMK bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF160VXC, ENCFF514PZW, ENCFF581FCG, ENCFF834TUP 6822837 ENCODE Processing Pipeline 04d9d6ab389f32c6f14fc731e5b9d0e3 https://www.encodeproject.org/files/ENCFF197DMK/@@download/ENCFF197DMK.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF280GTU bed narrowPeak optimal idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF001TDO, ENCFF197DMK, ENCFF251WTS, ENCFF901YWM 190738 ENCODE Processing Pipeline d3745e7133f56987c46493d8e6d4c989 https://www.encodeproject.org/files/ENCFF280GTU/@@download/ENCFF280GTU.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF820OCS bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF764PZX, ENCFF947CVN, ENCFF977MTW 6972441 ENCODE Processing Pipeline ae5666be81653ceec822d96358b12f0c https://www.encodeproject.org/files/ENCFF820OCS/@@download/ENCFF820OCS.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF061VCB bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF947CVN, ENCFF977MTW 6359309 ENCODE Processing Pipeline 3ec09c55ea1f7b4322b25ffae57fbbd1 https://www.encodeproject.org/files/ENCFF061VCB/@@download/ENCFF061VCB.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF866TCF bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF764PZX, ENCFF977MTW 6282247 ENCODE Processing Pipeline 5266e1b14addcb13437e5be3c60e2a4a https://www.encodeproject.org/files/ENCFF866TCF/@@download/ENCFF866TCF.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF508PVH bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF115YFR, ENCFF687QLR 6202262 ENCODE Processing Pipeline d629a3b5e8680573c197930792f42565 https://www.encodeproject.org/files/ENCFF508PVH/@@download/ENCFF508PVH.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF991YRK bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF115YFR, ENCFF191EJM 6073686 ENCODE Processing Pipeline 745e75a1f4c905160243c9c517dba314 https://www.encodeproject.org/files/ENCFF991YRK/@@download/ENCFF991YRK.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF757JLA bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF115YFR, ENCFF191EJM, ENCFF687QLR 6827776 ENCODE Processing Pipeline e644636532c450a2487d99a9a949e823 https://www.encodeproject.org/files/ENCFF757JLA/@@download/ENCFF757JLA.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF165GSE bed narrowPeak optimal idr thresholded peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF508PVH, ENCFF757JLA, ENCFF991YRK 198673 ENCODE Processing Pipeline 2149e2bff9cdd51af53a0c0635250c02 https://www.encodeproject.org/files/ENCFF165GSE/@@download/ENCFF165GSE.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF853TZC bed narrowPeak optimal idr thresholded peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF061VCB, ENCFF820OCS, ENCFF866TCF 161658 ENCODE Processing Pipeline 76dff59260974ea4959eabcd3f275a6a https://www.encodeproject.org/files/ENCFF853TZC/@@download/ENCFF853TZC.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF001VOQ bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 59113 Peggy Farnham, USC 53b97f9d370e39582467b6d40f7512e7 https://www.encodeproject.org/files/ENCFF001VOQ/@@download/ENCFF001VOQ.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CXY bed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 89035 ENCODE Consortium Analysis Working Group 75566ac70f8c0b67ab237afdd882c571 https://www.encodeproject.org/files/ENCFF002CXY/@@download/ENCFF002CXY.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF690WNQ bed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF540CBP, ENCFF611CFB, ENCFF613LAW 75317 ENCODE Processing Pipeline b4dbf7b0808315c0ca7fe2235b961f76 https://www.encodeproject.org/files/ENCFF690WNQ/@@download/ENCFF690WNQ.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF540CBP bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF728IYF 5248060 ENCODE Processing Pipeline ede423f58afd63d285ed5c1b8b464c01 https://www.encodeproject.org/files/ENCFF540CBP/@@download/ENCFF540CBP.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF910AUJ bed narrowPeak conservative idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF540CBP, ENCFF611CFB, ENCFF613LAW 59636 ENCODE Processing Pipeline 9dfd97e709c9cc1a8860fc1a39014f6f https://www.encodeproject.org/files/ENCFF910AUJ/@@download/ENCFF910AUJ.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF613LAW bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF874YYW 3394408 ENCODE Processing Pipeline 9f1adf22b56621e24e4abf84c713ec69 https://www.encodeproject.org/files/ENCFF613LAW/@@download/ENCFF613LAW.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF611CFB bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF728IYF, ENCFF874YYW 5748030 ENCODE Processing Pipeline d6c7519ab4c6f2d248ba03d1cd5f9b7e https://www.encodeproject.org/files/ENCFF611CFB/@@download/ENCFF611CFB.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF463JJS bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF247BJO 5345657 ENCODE Processing Pipeline 3431b39818c317d9293ded2e754c7f64 https://www.encodeproject.org/files/ENCFF463JJS/@@download/ENCFF463JJS.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF269JVH bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF210CIB 3458692 ENCODE Processing Pipeline a8f02fb68b875e901a7c8caea5dd4008 https://www.encodeproject.org/files/ENCFF269JVH/@@download/ENCFF269JVH.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF865APC bed narrowPeak conservative idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF269JVH, ENCFF445HEP, ENCFF463JJS 60744 ENCODE Processing Pipeline b5888e91a655043773b77bd7a9da9729 https://www.encodeproject.org/files/ENCFF865APC/@@download/ENCFF865APC.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF445HEP bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF210CIB, ENCFF247BJO 5768659 ENCODE Processing Pipeline 936c0f9544eb861a2629a69dacdac214 https://www.encodeproject.org/files/ENCFF445HEP/@@download/ENCFF445HEP.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF294EHN bed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF269JVH, ENCFF445HEP, ENCFF463JJS 74645 ENCODE Processing Pipeline f88de9d2471f83c6198379e4cbf8920a https://www.encodeproject.org/files/ENCFF294EHN/@@download/ENCFF294EHN.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF877UDE bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF084TWW, ENCFF449ZQF 7097868 ENCODE Processing Pipeline 1f01fb0e9e35b80561efe31a723b097c https://www.encodeproject.org/files/ENCFF877UDE/@@download/ENCFF877UDE.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF912QBK bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF449ZQF, ENCFF541WBX 6980795 ENCODE Processing Pipeline ec15f630d11debe6ea971d6126e6d6a1 https://www.encodeproject.org/files/ENCFF912QBK/@@download/ENCFF912QBK.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF907RDS bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF084TWW, ENCFF449ZQF, ENCFF541WBX 7145428 ENCODE Processing Pipeline 0de3b8264eb4bebc43b82ec2422a9bc3 https://www.encodeproject.org/files/ENCFF907RDS/@@download/ENCFF907RDS.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF841ZQQ bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF036ZLP, ENCFF581AZU 7128004 ENCODE Processing Pipeline 826f1a951220c3ac77efce9e36ea72f7 https://www.encodeproject.org/files/ENCFF841ZQQ/@@download/ENCFF841ZQQ.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF485TYY bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF036ZLP, ENCFF500HFO, ENCFF581AZU 7125075 ENCODE Processing Pipeline b0b96acc2cfe84043baf8a6f0fd038f4 https://www.encodeproject.org/files/ENCFF485TYY/@@download/ENCFF485TYY.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF170SAA bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF036ZLP, ENCFF500HFO 6902417 ENCODE Processing Pipeline 21db5386ed2abe867291b313c4f707e1 https://www.encodeproject.org/files/ENCFF170SAA/@@download/ENCFF170SAA.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF151FYK bed narrowPeak optimal idr thresholded peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF170SAA, ENCFF419RSJ, ENCFF485TYY, ENCFF841ZQQ 1038336 ENCODE Processing Pipeline 34f8bcf3bfb337549b4d8b50e7573a8d https://www.encodeproject.org/files/ENCFF151FYK/@@download/ENCFF151FYK.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF692PVV bed narrowPeak optimal idr thresholded peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF877UDE, ENCFF907RDS, ENCFF912QBK 923866 ENCODE Processing Pipeline 04a0cb049ff73ba89ee706b1951ff137 https://www.encodeproject.org/files/ENCFF692PVV/@@download/ENCFF692PVV.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF145UOC bed narrowPeak peaks ENCSR000AKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-10 ENCODE 2 ENCFF574XYY, ENCFF666LFR 4986190 ENCODE Processing Pipeline c3b4d66248b3a83653ef6cc9d6a25bbe https://www.encodeproject.org/files/ENCFF145UOC/@@download/ENCFF145UOC.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, moderate library complexity, low read length insufficient read depth ENCFF728DBX bed narrowPeak peaks ENCSR000AKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-10 ENCODE 1 ENCFF574XYY, ENCFF937NEW 1871355 ENCODE Processing Pipeline 113f8530c8c456c89a61f884205a37f2 https://www.encodeproject.org/files/ENCFF728DBX/@@download/ENCFF728DBX.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, moderate library complexity, low read length insufficient read depth ENCFF908KJV bed narrowPeak peaks ENCSR000AKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF574XYY, ENCFF666LFR, ENCFF937NEW 3599437 ENCODE Processing Pipeline 628a6a94f9e0512aef4837d53f68fa86 https://www.encodeproject.org/files/ENCFF908KJV/@@download/ENCFF908KJV.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, moderate library complexity, low read length insufficient read depth ENCFF322IFF bed narrowPeak replicated peaks ENCSR000AKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF145UOC, ENCFF728DBX, ENCFF908KJV 1319998 ENCODE Processing Pipeline 774e84d0fa68b9bcecd1fcaa1770d409 https://www.encodeproject.org/files/ENCFF322IFF/@@download/ENCFF322IFF.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, moderate library complexity, low read length insufficient read depth ENCFF742GLG bed narrowPeak peaks ENCSR000AKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-10 ENCODE 1 ENCFF190OWE, ENCFF392XRJ 1871158 ENCODE Processing Pipeline 6f2ef2d459721fefb523b1c121d9f6ea https://www.encodeproject.org/files/ENCFF742GLG/@@download/ENCFF742GLG.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, moderate library complexity, low read length insufficient read depth ENCFF999RUO bed narrowPeak peaks ENCSR000AKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF692KQZ 4988834 ENCODE Processing Pipeline c8b0d94254d4a5aa789e25a566d18edc https://www.encodeproject.org/files/ENCFF999RUO/@@download/ENCFF999RUO.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, moderate library complexity, low read length insufficient read depth ENCFF700RBU bed narrowPeak peaks ENCSR000AKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF190OWE, ENCFF392XRJ, ENCFF692KQZ 3599398 ENCODE Processing Pipeline afa961b879793d4c6f736df264a25dbb https://www.encodeproject.org/files/ENCFF700RBU/@@download/ENCFF700RBU.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, moderate library complexity, low read length insufficient read depth ENCFF049HUP bed narrowPeak replicated peaks ENCSR000AKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANB DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF700RBU, ENCFF742GLG, ENCFF999RUO 1321672 ENCODE Processing Pipeline eee69bfb5f63194ca1017e62b811b7fa https://www.encodeproject.org/files/ENCFF049HUP/@@download/ENCFF049HUP.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, mixed read lengths, moderate library complexity, low read length insufficient read depth ENCFF449ZKG bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF836NST 6242857 ENCODE Processing Pipeline f57d50dd25547d438eb2fc58621272f0 https://www.encodeproject.org/files/ENCFF449ZKG/@@download/ENCFF449ZKG.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF770XGT bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF002FHN, ENCFF836NST 6705971 ENCODE Processing Pipeline a77523a29d6805fc32c4923362d93d67 https://www.encodeproject.org/files/ENCFF770XGT/@@download/ENCFF770XGT.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF888BUW bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF002FHN 5969385 ENCODE Processing Pipeline 29ddfe6d51e93a5c50b47a4a97fd5512 https://www.encodeproject.org/files/ENCFF888BUW/@@download/ENCFF888BUW.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF452INW bed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF449ZKG, ENCFF770XGT, ENCFF888BUW 87475 ENCODE Processing Pipeline 452e76c6b1cde91d31a6cea314121946 https://www.encodeproject.org/files/ENCFF452INW/@@download/ENCFF452INW.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF426GSY bed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF449ZKG, ENCFF770XGT, ENCFF888BUW 123462 ENCODE Processing Pipeline f372203cf93a8bdcd16c8592f8bfcf8d https://www.encodeproject.org/files/ENCFF426GSY/@@download/ENCFF426GSY.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF235BMG bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT, ENCFF970YTT 6694225 ENCODE Processing Pipeline 8fbe67c8e544b0c77491a647e48ab12c https://www.encodeproject.org/files/ENCFF235BMG/@@download/ENCFF235BMG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF539MNA bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT 6192680 ENCODE Processing Pipeline 929042b07cf8f9c996d1039cf9d60363 https://www.encodeproject.org/files/ENCFF539MNA/@@download/ENCFF539MNA.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF095DJV bed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF235BMG, ENCFF539MNA, ENCFF915TWO 86751 ENCODE Processing Pipeline f5abbd0ace1017af73f7970bd0533b9c https://www.encodeproject.org/files/ENCFF095DJV/@@download/ENCFF095DJV.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF545VNY bed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF235BMG, ENCFF539MNA, ENCFF915TWO 122108 ENCODE Processing Pipeline a29ad50d06ead7823ea05e7b4a848633 https://www.encodeproject.org/files/ENCFF545VNY/@@download/ENCFF545VNY.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF915TWO bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF970YTT 6245568 ENCODE Processing Pipeline be53c15e63e17b68db330f759e7bf3e4 https://www.encodeproject.org/files/ENCFF915TWO/@@download/ENCFF915TWO.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF001VNE bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 124606 Peggy Farnham, USC d7f7e77f95b44fbe690dfb976de51a5a https://www.encodeproject.org/files/ENCFF001VNE/@@download/ENCFF001VNE.bed.gz hg19 archived inconsistent mapped reads lengths, missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF002CWQ bed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 209407 ENCODE Consortium Analysis Working Group 36c61da27aae1632856794e5867b58b3 https://www.encodeproject.org/files/ENCFF002CWQ/@@download/ENCFF002CWQ.bed.gz hg19 archived inconsistent mapped reads lengths, missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF829VOR bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF340JWK, ENCFF355SGP 2807656 ENCODE Processing Pipeline 034d781a3942a300075bd95cfb274084 https://www.encodeproject.org/files/ENCFF829VOR/@@download/ENCFF829VOR.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF224NNV bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF340JWK, ENCFF355SGP, ENCFF779CRV 5002808 ENCODE Processing Pipeline 8f066b0e916b306aa90dc8a591f6b6a1 https://www.encodeproject.org/files/ENCFF224NNV/@@download/ENCFF224NNV.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF440KMN bed narrowPeak conservative idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF224NNV, ENCFF419RSJ, ENCFF510BVA, ENCFF829VOR 74680 ENCODE Processing Pipeline a935b660b0dc6d69044c43bf15f3c914 https://www.encodeproject.org/files/ENCFF440KMN/@@download/ENCFF440KMN.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF173TXA bed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF224NNV, ENCFF419RSJ, ENCFF510BVA, ENCFF829VOR 185059 ENCODE Processing Pipeline c395f505b604dfc3a2e6759e674e5857 https://www.encodeproject.org/files/ENCFF173TXA/@@download/ENCFF173TXA.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF510BVA bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF779CRV 4116494 ENCODE Processing Pipeline 6ea655dbcbd66b25fbd1057e53281e70 https://www.encodeproject.org/files/ENCFF510BVA/@@download/ENCFF510BVA.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF732HOE bed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF061TTI, ENCFF163ZFQ, ENCFF717ZNF 185950 ENCODE Processing Pipeline 0a5986cb974e654436fe293de05e5274 https://www.encodeproject.org/files/ENCFF732HOE/@@download/ENCFF732HOE.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF717ZNF bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF778HCA, ENCFF990JRT 5049856 ENCODE Processing Pipeline 4b8b4d5a7dc25ccddf6939ee2c2f2b65 https://www.encodeproject.org/files/ENCFF717ZNF/@@download/ENCFF717ZNF.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF727SRR bed narrowPeak conservative idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF061TTI, ENCFF163ZFQ, ENCFF717ZNF 74527 ENCODE Processing Pipeline 37886e11895c8e10ce30d0389d587035 https://www.encodeproject.org/files/ENCFF727SRR/@@download/ENCFF727SRR.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF061TTI bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF990JRT 4134004 ENCODE Processing Pipeline 460d8efe582bd8ac3d839aaaa1cb871e https://www.encodeproject.org/files/ENCFF061TTI/@@download/ENCFF061TTI.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF163ZFQ bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF778HCA 2818433 ENCODE Processing Pipeline c6f4e290a05030a7b7d4cb89d6b57354 https://www.encodeproject.org/files/ENCFF163ZFQ/@@download/ENCFF163ZFQ.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF575VCO bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF587PVQ, ENCFF742TAS 6926185 ENCODE Processing Pipeline f989a2624676b999e705716b76e3d2f5 https://www.encodeproject.org/files/ENCFF575VCO/@@download/ENCFF575VCO.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF621JVC bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF742TAS 6313460 ENCODE Processing Pipeline fef2a2cf175ee3d8a5aa91625c03603f https://www.encodeproject.org/files/ENCFF621JVC/@@download/ENCFF621JVC.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF344EVG bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF587PVQ 5960377 ENCODE Processing Pipeline 37d635e74414b9544ba832e25e7c05bf https://www.encodeproject.org/files/ENCFF344EVG/@@download/ENCFF344EVG.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF357AHH bed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF344EVG, ENCFF419RSJ, ENCFF575VCO, ENCFF621JVC 94723 ENCODE Processing Pipeline f2d4205f963f9e65d6a05c437d088950 https://www.encodeproject.org/files/ENCFF357AHH/@@download/ENCFF357AHH.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF512IAI bed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF344EVG, ENCFF419RSJ, ENCFF575VCO, ENCFF621JVC 108529 ENCODE Processing Pipeline e33e20bf2dddde8658e603a7255dc012 https://www.encodeproject.org/files/ENCFF512IAI/@@download/ENCFF512IAI.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF127VYL bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC, ENCFF946BKE 6960660 ENCODE Processing Pipeline 424c487b448113ec1d5a48e87875ff0e https://www.encodeproject.org/files/ENCFF127VYL/@@download/ENCFF127VYL.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF588ZYR bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC 6374559 ENCODE Processing Pipeline c33c3673740b566fbda54f4be7e1c3de https://www.encodeproject.org/files/ENCFF588ZYR/@@download/ENCFF588ZYR.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF086FEW bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF946BKE 5994594 ENCODE Processing Pipeline 1a05c82267f19e88a3885da5e35280e9 https://www.encodeproject.org/files/ENCFF086FEW/@@download/ENCFF086FEW.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF850HGO bed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF086FEW, ENCFF127VYL, ENCFF588ZYR 93873 ENCODE Processing Pipeline d2895077f392374a42dbb1104cb96b8f https://www.encodeproject.org/files/ENCFF850HGO/@@download/ENCFF850HGO.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF249EZR bed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF086FEW, ENCFF127VYL, ENCFF588ZYR 107201 ENCODE Processing Pipeline e6d734cd2dddbdb65175f4aac5d619c6 https://www.encodeproject.org/files/ENCFF249EZR/@@download/ENCFF249EZR.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth ENCFF002CMF bed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 312017 ENCODE Consortium Analysis Working Group efd79bfac03aaccd0ab8859080c6ee93 https://www.encodeproject.org/files/ENCFF002CMF/@@download/ENCFF002CMF.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF755HSD bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF204TUQ, ENCFF772PJM 2656759 ENCODE Processing Pipeline 69f832bd3be8be7034aeea121df7e0d2 https://www.encodeproject.org/files/ENCFF755HSD/@@download/ENCFF755HSD.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF286MTX bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF204TUQ, ENCFF546IMN, ENCFF772PJM 1756619 ENCODE Processing Pipeline f72241646af97bb20cbd34b0215fca7a https://www.encodeproject.org/files/ENCFF286MTX/@@download/ENCFF286MTX.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF082DAI bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF546IMN, ENCFF772PJM 2474090 ENCODE Processing Pipeline 1217421d297fbc437dca3d0f29a41e06 https://www.encodeproject.org/files/ENCFF082DAI/@@download/ENCFF082DAI.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF809CZV bed narrowPeak conservative idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF082DAI, ENCFF286MTX, ENCFF419RSJ, ENCFF755HSD 162696 ENCODE Processing Pipeline 1be4893c8ac580d221c18ca8fba2d66c https://www.encodeproject.org/files/ENCFF809CZV/@@download/ENCFF809CZV.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF023ZUW bed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF082DAI, ENCFF286MTX, ENCFF419RSJ, ENCFF755HSD 236250 ENCODE Processing Pipeline 32adbc5e9e50c18860ffbb3c15be97b6 https://www.encodeproject.org/files/ENCFF023ZUW/@@download/ENCFF023ZUW.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review insufficient read depth, poor library complexity, severe bottlenecking ENCFF433ANO bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF066EHS, ENCFF834TUP 7144829 ENCODE Processing Pipeline fe359d4ff2dce87656e7ebd6b6d138ba https://www.encodeproject.org/files/ENCFF433ANO/@@download/ENCFF433ANO.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF639RPL bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF066EHS, ENCFF160VXC, ENCFF712WEK, ENCFF834TUP 7251086 ENCODE Processing Pipeline 082aa1a21dc8e4ed61552495835dd97a https://www.encodeproject.org/files/ENCFF639RPL/@@download/ENCFF639RPL.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF975UYT bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF160VXC, ENCFF712WEK 6769806 ENCODE Processing Pipeline 1d5437af2fa6db05277da419a4a3e02d https://www.encodeproject.org/files/ENCFF975UYT/@@download/ENCFF975UYT.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF056MQX bed narrowPeak conservative idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF001TDO, ENCFF433ANO, ENCFF639RPL, ENCFF975UYT 34582 ENCODE Processing Pipeline b25af72a0a0f32331706d9b075e55983 https://www.encodeproject.org/files/ENCFF056MQX/@@download/ENCFF056MQX.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF588OLK bed narrowPeak optimal idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF001TDO, ENCFF433ANO, ENCFF639RPL, ENCFF975UYT 59489 ENCODE Processing Pipeline 21ad5e41efc93bdc0af0f6d786d80664 https://www.encodeproject.org/files/ENCFF588OLK/@@download/ENCFF588OLK.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF469MGU bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF548YYR, ENCFF566EXS 7250021 ENCODE Processing Pipeline 240a656325dee2867f0ecd8afff2a0e0 https://www.encodeproject.org/files/ENCFF469MGU/@@download/ENCFF469MGU.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF821HLM bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF548YYR 6643297 ENCODE Processing Pipeline 37c2b74d0d2245710ffa2cc1d4d4b798 https://www.encodeproject.org/files/ENCFF821HLM/@@download/ENCFF821HLM.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF129QWO bed narrowPeak conservative idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF469MGU, ENCFF821HLM, ENCFF964KTH 35013 ENCODE Processing Pipeline 3e35ed26efb21aa07e2847ba8095ebfe https://www.encodeproject.org/files/ENCFF129QWO/@@download/ENCFF129QWO.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF964KTH bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF566EXS 7100368 ENCODE Processing Pipeline f57af245ccb8818ca69fc56985889588 https://www.encodeproject.org/files/ENCFF964KTH/@@download/ENCFF964KTH.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF945HJR bed narrowPeak optimal idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF469MGU, ENCFF821HLM, ENCFF964KTH 56074 ENCODE Processing Pipeline 33f82cda31323b371851f3b446a0760f https://www.encodeproject.org/files/ENCFF945HJR/@@download/ENCFF945HJR.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF528NTT bed narrowPeak peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 1 ENCFF160VXC, ENCFF497KAC, ENCFF834TUP 7120426 ENCODE Processing Pipeline e2286a4dd49545cee098c9b6607bcb95 https://www.encodeproject.org/files/ENCFF528NTT/@@download/ENCFF528NTT.bed.gz hg19 released mild to moderate bottlenecking ENCFF955FHT bed narrowPeak peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 2 ENCFF058URJ, ENCFF834TUP 6985710 ENCODE Processing Pipeline 4f3f91b04a91c5094baa83d6faf5f2c4 https://www.encodeproject.org/files/ENCFF955FHT/@@download/ENCFF955FHT.bed.gz hg19 released mild to moderate bottlenecking ENCFF833BSZ bed narrowPeak peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 1, 2 ENCFF058URJ, ENCFF160VXC, ENCFF497KAC, ENCFF834TUP 7217131 ENCODE Processing Pipeline d916e638e3570d23509e4ec51df3bb4b https://www.encodeproject.org/files/ENCFF833BSZ/@@download/ENCFF833BSZ.bed.gz hg19 released mild to moderate bottlenecking ENCFF302FLM bed narrowPeak conservative idr thresholded peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 1, 2 ENCFF001TDO, ENCFF528NTT, ENCFF833BSZ, ENCFF955FHT 86041 ENCODE Processing Pipeline b27121457e461c80ba2896bcd0f76964 https://www.encodeproject.org/files/ENCFF302FLM/@@download/ENCFF302FLM.bed.gz hg19 released mild to moderate bottlenecking ENCFF117EWO bed narrowPeak optimal idr thresholded peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 1, 2 ENCFF001TDO, ENCFF528NTT, ENCFF833BSZ, ENCFF955FHT 111698 ENCODE Processing Pipeline ed6df8f4fbfb9414d371a0b7f7608180 https://www.encodeproject.org/files/ENCFF117EWO/@@download/ENCFF117EWO.bed.gz hg19 released mild to moderate bottlenecking ENCFF317UOQ bed narrowPeak peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 1 ENCFF515NUR, ENCFF712WXB, ENCFF790TAN 7091351 ENCODE Processing Pipeline c83999def2d69729999eac9725bd996c https://www.encodeproject.org/files/ENCFF317UOQ/@@download/ENCFF317UOQ.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF465YRN bed narrowPeak peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 1, 2 ENCFF515NUR, ENCFF712WXB, ENCFF790TAN, ENCFF993QLY 7219274 ENCODE Processing Pipeline 93219a30eb13ad7cafa55572e0a34c3b https://www.encodeproject.org/files/ENCFF465YRN/@@download/ENCFF465YRN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF845QTY bed narrowPeak peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 2 ENCFF712WXB, ENCFF993QLY 6894475 ENCODE Processing Pipeline 070215be0edfa8029d442d3a44049411 https://www.encodeproject.org/files/ENCFF845QTY/@@download/ENCFF845QTY.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF351DBE bed narrowPeak optimal idr thresholded peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 1, 2 ENCFF317UOQ, ENCFF419RSJ, ENCFF465YRN, ENCFF845QTY 111813 ENCODE Processing Pipeline 27b0b51708910745225fabbbb41c0e47 https://www.encodeproject.org/files/ENCFF351DBE/@@download/ENCFF351DBE.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF668NYT bed narrowPeak conservative idr thresholded peaks ENCSR402XII ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB463WVX DNA False 2016-10-14 ENCODE 1, 2 ENCFF317UOQ, ENCFF419RSJ, ENCFF465YRN, ENCFF845QTY 87156 ENCODE Processing Pipeline c6231d3ed885f3ff7be001141d440f81 https://www.encodeproject.org/files/ENCFF668NYT/@@download/ENCFF668NYT.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF002CLX bed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 212269 ENCODE Consortium Analysis Working Group 351582bb9b47db34b6c4e31180a91d50 https://www.encodeproject.org/files/ENCFF002CLX/@@download/ENCFF002CLX.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF912HSU bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF398SXO, ENCFF401KIO, ENCFF772PJM 5554652 ENCODE Processing Pipeline bb9b6f8752b916f9b14c57d4038020e5 https://www.encodeproject.org/files/ENCFF912HSU/@@download/ENCFF912HSU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF928OFV bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401KIO, ENCFF772PJM 4608923 ENCODE Processing Pipeline d7acca94b1164ef2ee6e3e4e901095fd https://www.encodeproject.org/files/ENCFF928OFV/@@download/ENCFF928OFV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF461PRP bed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF780KUW, ENCFF912HSU, ENCFF928OFV 206712 ENCODE Processing Pipeline 709b8e71866304816aad277c92c8a529 https://www.encodeproject.org/files/ENCFF461PRP/@@download/ENCFF461PRP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF780KUW bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF398SXO, ENCFF772PJM 1813656 ENCODE Processing Pipeline 0a31bd7c7d097b456fbae9809f31c11b https://www.encodeproject.org/files/ENCFF780KUW/@@download/ENCFF780KUW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF786DOF bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF090JBA, ENCFF160VXC 6967101 ENCODE Processing Pipeline 2ec38696cf24579860c517913f038387 https://www.encodeproject.org/files/ENCFF786DOF/@@download/ENCFF786DOF.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF733TAS bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF368KYI, ENCFF834TUP 7027912 ENCODE Processing Pipeline 0de62bf87fc85a4410f6e86e79d8876a https://www.encodeproject.org/files/ENCFF733TAS/@@download/ENCFF733TAS.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF163OZR bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF090JBA, ENCFF160VXC, ENCFF368KYI, ENCFF834TUP 7224661 ENCODE Processing Pipeline a9fccfe8c2260b5662877651118d1aa9 https://www.encodeproject.org/files/ENCFF163OZR/@@download/ENCFF163OZR.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF611GXL bed narrowPeak conservative idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF001TDO, ENCFF163OZR, ENCFF733TAS, ENCFF786DOF 287523 ENCODE Processing Pipeline 22441bf22be6ca6c34b085ed0459afb1 https://www.encodeproject.org/files/ENCFF611GXL/@@download/ENCFF611GXL.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF010UHD bed narrowPeak optimal idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF001TDO, ENCFF163OZR, ENCFF733TAS, ENCFF786DOF 347670 ENCODE Processing Pipeline 807a6c046733e6afc5f75fcff16832d9 https://www.encodeproject.org/files/ENCFF010UHD/@@download/ENCFF010UHD.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF723NUH bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF837ZOY 6927636 ENCODE Processing Pipeline 50b72f86c2ddd1a3f5b23e880571f659 https://www.encodeproject.org/files/ENCFF723NUH/@@download/ENCFF723NUH.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF858GQK bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF183MSQ 6899844 ENCODE Processing Pipeline 1031ecab66d9941b0d15fd56a681f7a2 https://www.encodeproject.org/files/ENCFF858GQK/@@download/ENCFF858GQK.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF588ASX bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF183MSQ, ENCFF837ZOY 7224266 ENCODE Processing Pipeline ffa4df8f56c55c46bb63e637cd24d587 https://www.encodeproject.org/files/ENCFF588ASX/@@download/ENCFF588ASX.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF667ANE bed narrowPeak conservative idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF419RSJ, ENCFF588ASX, ENCFF723NUH, ENCFF858GQK 289670 ENCODE Processing Pipeline 563feef21f0c506f338e36723cef44e2 https://www.encodeproject.org/files/ENCFF667ANE/@@download/ENCFF667ANE.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF193PVX bed narrowPeak optimal idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF419RSJ, ENCFF588ASX, ENCFF723NUH, ENCFF858GQK 351650 ENCODE Processing Pipeline 2a7a796c41def255c0a3425c32550198 https://www.encodeproject.org/files/ENCFF193PVX/@@download/ENCFF193PVX.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF216MFC bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF170DKK, ENCFF834TUP 7126296 ENCODE Processing Pipeline ba5c63ea5c27ef70e0538c87ad9ca064 https://www.encodeproject.org/files/ENCFF216MFC/@@download/ENCFF216MFC.bed.gz hg19 released mild to moderate bottlenecking ENCFF069GYB bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF170DKK, ENCFF834TUP, ENCFF991XPF 7283592 ENCODE Processing Pipeline 97b6ccb994b891eb94263b3ec1c98b26 https://www.encodeproject.org/files/ENCFF069GYB/@@download/ENCFF069GYB.bed.gz hg19 released mild to moderate bottlenecking ENCFF869KQW bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF160VXC, ENCFF991XPF 6932464 ENCODE Processing Pipeline 3273e779c299bdeae6219e06b81c38f9 https://www.encodeproject.org/files/ENCFF869KQW/@@download/ENCFF869KQW.bed.gz hg19 released mild to moderate bottlenecking ENCFF201PDX bed narrowPeak conservative idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF069GYB, ENCFF216MFC, ENCFF869KQW 197690 ENCODE Processing Pipeline 41807fca2427bef06cc8ad3d2d7dab4a https://www.encodeproject.org/files/ENCFF201PDX/@@download/ENCFF201PDX.bed.gz hg19 released mild to moderate bottlenecking ENCFF859FVX bed narrowPeak optimal idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF069GYB, ENCFF216MFC, ENCFF869KQW 270063 ENCODE Processing Pipeline 49b2fe762e83e323d77be75057dea680 https://www.encodeproject.org/files/ENCFF859FVX/@@download/ENCFF859FVX.bed.gz hg19 released mild to moderate bottlenecking ENCFF306PQS bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF432NAV, ENCFF824HGA 7284955 ENCODE Processing Pipeline 84602e359e6d8d9af6ac13aaccb28634 https://www.encodeproject.org/files/ENCFF306PQS/@@download/ENCFF306PQS.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF356NXU bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF432NAV 6852566 ENCODE Processing Pipeline b53a79ed2a69b2a47c2c8c6eeb3c4ee8 https://www.encodeproject.org/files/ENCFF356NXU/@@download/ENCFF356NXU.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF503VRU bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF824HGA 7084361 ENCODE Processing Pipeline b7b13d8a2decce1200c7cb5a28b6c1ce https://www.encodeproject.org/files/ENCFF503VRU/@@download/ENCFF503VRU.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF077WVW bed narrowPeak conservative idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF306PQS, ENCFF356NXU, ENCFF419RSJ, ENCFF503VRU 198767 ENCODE Processing Pipeline 96297eddddcd093d759d57804f8de5b0 https://www.encodeproject.org/files/ENCFF077WVW/@@download/ENCFF077WVW.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF646MEF bed narrowPeak optimal idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF306PQS, ENCFF356NXU, ENCFF419RSJ, ENCFF503VRU 278256 ENCODE Processing Pipeline fa755334fe03f026bea8a7d699fe31ca https://www.encodeproject.org/files/ENCFF646MEF/@@download/ENCFF646MEF.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF002CMZ bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 441449 ENCODE Consortium Analysis Working Group f57e8302a733b1d28d1d8fc097de34cd https://www.encodeproject.org/files/ENCFF002CMZ/@@download/ENCFF002CMZ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF345YFV bed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF101JWH, ENCFF412YTK, ENCFF644MVI 375088 ENCODE Processing Pipeline b39d11d380e03f50421cf04de59abee9 https://www.encodeproject.org/files/ENCFF345YFV/@@download/ENCFF345YFV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF412YTK bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF859KGS 4043931 ENCODE Processing Pipeline d6b3c6ecd2f902f4c5f59525622b62da https://www.encodeproject.org/files/ENCFF412YTK/@@download/ENCFF412YTK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF706ISJ bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF101JWH, ENCFF412YTK, ENCFF644MVI 533464 ENCODE Processing Pipeline ee9d4887416c08e558ca9ce0f11d8c69 https://www.encodeproject.org/files/ENCFF706ISJ/@@download/ENCFF706ISJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF101JWH bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF750MIM, ENCFF859KGS, ENCFF920CCJ 5825370 ENCODE Processing Pipeline b2c53b5b3a7acccd8ff47083c3ffb2dc https://www.encodeproject.org/files/ENCFF101JWH/@@download/ENCFF101JWH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF644MVI bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF920CCJ 5401132 ENCODE Processing Pipeline 2d9ed99c4264b18ec0eb5cc5200d7a3d https://www.encodeproject.org/files/ENCFF644MVI/@@download/ENCFF644MVI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF348XKJ bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF784SCN 4015381 ENCODE Processing Pipeline fff268e3ec4aad8fb0d9f0616aa0cbd9 https://www.encodeproject.org/files/ENCFF348XKJ/@@download/ENCFF348XKJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF193NOO bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF778PDI 5345806 ENCODE Processing Pipeline 394514c5b53808ab5532cbfc0e2931ed https://www.encodeproject.org/files/ENCFF193NOO/@@download/ENCFF193NOO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF482PBU bed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193NOO, ENCFF348XKJ, ENCFF419RSJ, ENCFF586QIP 373605 ENCODE Processing Pipeline bf7a3dd26551f2231aa18a2735e7f1dd https://www.encodeproject.org/files/ENCFF482PBU/@@download/ENCFF482PBU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF245LRG bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193NOO, ENCFF348XKJ, ENCFF419RSJ, ENCFF586QIP 530654 ENCODE Processing Pipeline 2c00a20ed88a81bb259b21e8faf4d309 https://www.encodeproject.org/files/ENCFF245LRG/@@download/ENCFF245LRG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF586QIP bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF772PJM, ENCFF778PDI, ENCFF784SCN 5817996 ENCODE Processing Pipeline 43bad6f80050c426813c06b0ebe8a806 https://www.encodeproject.org/files/ENCFF586QIP/@@download/ENCFF586QIP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF768USG bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF479IHH, ENCFF968XOX 6946843 ENCODE Processing Pipeline 745f5ce37edc7b4e7134cbfed6a06e23 https://www.encodeproject.org/files/ENCFF768USG/@@download/ENCFF768USG.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF587MUY bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF479IHH, ENCFF729SVH 6674009 ENCODE Processing Pipeline 3478ef7e080c45e4d353062fb4157e75 https://www.encodeproject.org/files/ENCFF587MUY/@@download/ENCFF587MUY.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF887PEG bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF479IHH, ENCFF729SVH, ENCFF968XOX 7208367 ENCODE Processing Pipeline 468c5f095b3bfa17490c180ac3fb2ec4 https://www.encodeproject.org/files/ENCFF887PEG/@@download/ENCFF887PEG.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF407ACB bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF095OEN 6443870 ENCODE Processing Pipeline cffab73e1a6d1edb009062a0a1eb3aec https://www.encodeproject.org/files/ENCFF407ACB/@@download/ENCFF407ACB.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF532YUW bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF334BPF 6821457 ENCODE Processing Pipeline 90ee3c724f2f52ebb0e20150e7ab2636 https://www.encodeproject.org/files/ENCFF532YUW/@@download/ENCFF532YUW.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF591NGE bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF095OEN, ENCFF334BPF 7128913 ENCODE Processing Pipeline 35d373d6c1212b46b6bad82eb9b94b9c https://www.encodeproject.org/files/ENCFF591NGE/@@download/ENCFF591NGE.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF499LJX bed narrowPeak conservative idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF407ACB, ENCFF419RSJ, ENCFF532YUW, ENCFF591NGE 237843 ENCODE Processing Pipeline 22ae967510f40d8631aab8ab35b873e9 https://www.encodeproject.org/files/ENCFF499LJX/@@download/ENCFF499LJX.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF977ZNJ bed narrowPeak optimal idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF407ACB, ENCFF419RSJ, ENCFF532YUW, ENCFF591NGE 237807 ENCODE Processing Pipeline ba773340d82d813138597b5654be9d93 https://www.encodeproject.org/files/ENCFF977ZNJ/@@download/ENCFF977ZNJ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF377ZLR bed narrowPeak conservative idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF587MUY, ENCFF768USG, ENCFF887PEG 192374 ENCODE Processing Pipeline 30ce346d0419f40d40f18293b8a6c329 https://www.encodeproject.org/files/ENCFF377ZLR/@@download/ENCFF377ZLR.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF173NRW bed narrowPeak optimal idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF587MUY, ENCFF768USG, ENCFF887PEG 196576 ENCODE Processing Pipeline 88b2198aa6b7cfb45030cc7203fa53c3 https://www.encodeproject.org/files/ENCFF173NRW/@@download/ENCFF173NRW.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF392CTG bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF054RVU, ENCFF285NOA 6823970 ENCODE Processing Pipeline 75c3cf7db837a69224afe8ae47622624 https://www.encodeproject.org/files/ENCFF392CTG/@@download/ENCFF392CTG.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF254TMJ bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF285NOA, ENCFF306XER 6085191 ENCODE Processing Pipeline 2094ae886ce87c6e14bc9cd5117889d4 https://www.encodeproject.org/files/ENCFF254TMJ/@@download/ENCFF254TMJ.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF609KYL bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF054RVU, ENCFF285NOA, ENCFF306XER 7111238 ENCODE Processing Pipeline 6b367b80b7e5ad6ca9d8bab9b15f37a9 https://www.encodeproject.org/files/ENCFF609KYL/@@download/ENCFF609KYL.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF699LOC bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF690YWW 5933518 ENCODE Processing Pipeline af2385cfd878b9af258ba8da04225c2f https://www.encodeproject.org/files/ENCFF699LOC/@@download/ENCFF699LOC.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF992JUC bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF180ZQP, ENCFF690YWW 6990183 ENCODE Processing Pipeline 920787dc67c53e37815dd3e165a66a80 https://www.encodeproject.org/files/ENCFF992JUC/@@download/ENCFF992JUC.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF582YXT bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF180ZQP 6669571 ENCODE Processing Pipeline fa2e93ec3cf8dcc80f5494adf35d174c https://www.encodeproject.org/files/ENCFF582YXT/@@download/ENCFF582YXT.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF675TCT bed narrowPeak conservative idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF582YXT, ENCFF699LOC, ENCFF992JUC 190968 ENCODE Processing Pipeline 59d9c3727b85b95b6df2df0b0aa865e2 https://www.encodeproject.org/files/ENCFF675TCT/@@download/ENCFF675TCT.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF791JWI bed narrowPeak optimal idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF582YXT, ENCFF699LOC, ENCFF992JUC 223942 ENCODE Processing Pipeline b561c235f2f24be86a30be2d0cd4b3eb https://www.encodeproject.org/files/ENCFF791JWI/@@download/ENCFF791JWI.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF755MMS bed narrowPeak conservative idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF254TMJ, ENCFF392CTG, ENCFF609KYL 151974 ENCODE Processing Pipeline 1b104cb0e83786c9e20c34ab5fa36631 https://www.encodeproject.org/files/ENCFF755MMS/@@download/ENCFF755MMS.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF654BMD bed narrowPeak optimal idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF254TMJ, ENCFF392CTG, ENCFF609KYL 174216 ENCODE Processing Pipeline 23427149d84edb0eff7ef3d6750b8089 https://www.encodeproject.org/files/ENCFF654BMD/@@download/ENCFF654BMD.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF002CMP bed narrowPeak optimal idr thresholded peaks ENCSR000BLK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 94422 ENCODE Consortium Analysis Working Group 4faa64e973c1fd4be5ecec209317dcc3 https://www.encodeproject.org/files/ENCFF002CMP/@@download/ENCFF002CMP.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF679ZDY bed narrowPeak conservative idr thresholded peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF228HWO, ENCFF275VNL, ENCFF533JRR 21056 ENCODE Processing Pipeline 1480b0be6c78795d97648c7670fb7964 https://www.encodeproject.org/files/ENCFF679ZDY/@@download/ENCFF679ZDY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF533JRR bed narrowPeak peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF477SGV, ENCFF975FFH 5247023 ENCODE Processing Pipeline bd67ba1af0ee09c71b458010c404c435 https://www.encodeproject.org/files/ENCFF533JRR/@@download/ENCFF533JRR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF228HWO bed narrowPeak peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF705ZEH, ENCFF923IOC 5162884 ENCODE Processing Pipeline 9bfbe349a82d420a38efad002cc21443 https://www.encodeproject.org/files/ENCFF228HWO/@@download/ENCFF228HWO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF275VNL bed narrowPeak peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF477SGV, ENCFF705ZEH, ENCFF923IOC, ENCFF975FFH 6613364 ENCODE Processing Pipeline a8ed4b24011134834e59a5fadf933222 https://www.encodeproject.org/files/ENCFF275VNL/@@download/ENCFF275VNL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF798URE bed narrowPeak optimal idr thresholded peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF228HWO, ENCFF275VNL, ENCFF533JRR 21631 ENCODE Processing Pipeline f893297bbcf469300a612980a576c882 https://www.encodeproject.org/files/ENCFF798URE/@@download/ENCFF798URE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF211SUA bed narrowPeak peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF702CFH 5127514 ENCODE Processing Pipeline 7f0638c5305958fc5cc9b1a850ed8078 https://www.encodeproject.org/files/ENCFF211SUA/@@download/ENCFF211SUA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF395WWG bed narrowPeak peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF159BGM 5156138 ENCODE Processing Pipeline 71ebb6184834056e7043c1fc95ccc20c https://www.encodeproject.org/files/ENCFF395WWG/@@download/ENCFF395WWG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF986BVH bed narrowPeak conservative idr thresholded peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF211SUA, ENCFF395WWG, ENCFF419RSJ, ENCFF703ZSP 21387 ENCODE Processing Pipeline ea2c7de86c51b3509c40ba4d2cc4c28a https://www.encodeproject.org/files/ENCFF986BVH/@@download/ENCFF986BVH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF703ZSP bed narrowPeak peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF159BGM, ENCFF702CFH 6620168 ENCODE Processing Pipeline 119c029cdfc5b4eaab8d9c8aa6c571a2 https://www.encodeproject.org/files/ENCFF703ZSP/@@download/ENCFF703ZSP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF862DEO bed narrowPeak optimal idr thresholded peaks ENCSR832DMO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SRSF1-human ENCAB962KAD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF211SUA, ENCFF395WWG, ENCFF419RSJ, ENCFF703ZSP 21854 ENCODE Processing Pipeline 27eb3d47424b84b5fcd2da267c441f3f https://www.encodeproject.org/files/ENCFF862DEO/@@download/ENCFF862DEO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF980ENB bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF431XVO, ENCFF572OMD 5998545 ENCODE Processing Pipeline a861b9c84c22d404d0e45ef934e017d2 https://www.encodeproject.org/files/ENCFF980ENB/@@download/ENCFF980ENB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF191KLS bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF648AFL 6220137 ENCODE Processing Pipeline 83bc0b2fc5f626e6c45d14ff150c1ac7 https://www.encodeproject.org/files/ENCFF191KLS/@@download/ENCFF191KLS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF790CEE bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF431XVO, ENCFF508DBG, ENCFF572OMD, ENCFF648AFL 7175237 ENCODE Processing Pipeline cabbccd88785f8ad1a8113c22ac7bb49 https://www.encodeproject.org/files/ENCFF790CEE/@@download/ENCFF790CEE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF556KWA bed narrowPeak conservative idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF191KLS, ENCFF790CEE, ENCFF980ENB 199829 ENCODE Processing Pipeline 5943d47018181e2692efa861635e81a1 https://www.encodeproject.org/files/ENCFF556KWA/@@download/ENCFF556KWA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF836VRV bed narrowPeak optimal idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF191KLS, ENCFF790CEE, ENCFF980ENB 213412 ENCODE Processing Pipeline ed6161b402cc3a65c4fcd72b0bcd501a https://www.encodeproject.org/files/ENCFF836VRV/@@download/ENCFF836VRV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF717NDQ bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF360QAB 6202996 ENCODE Processing Pipeline 752a2a067a1a9191ee98b5ebc49d4b5c https://www.encodeproject.org/files/ENCFF717NDQ/@@download/ENCFF717NDQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF927SOS bed narrowPeak conservative idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF110JOA, ENCFF419RSJ, ENCFF577CIY, ENCFF717NDQ 189895 ENCODE Processing Pipeline 6af1bf0c1cc7cf347f2cfbea481c3f81 https://www.encodeproject.org/files/ENCFF927SOS/@@download/ENCFF927SOS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF577CIY bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF471TDC 5974176 ENCODE Processing Pipeline ccad72acf1f51fe8632102542f1352e1 https://www.encodeproject.org/files/ENCFF577CIY/@@download/ENCFF577CIY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF110JOA bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF360QAB, ENCFF471TDC 7151450 ENCODE Processing Pipeline 0db23da7a4ed1023a9e624047836efda https://www.encodeproject.org/files/ENCFF110JOA/@@download/ENCFF110JOA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF100VYA bed narrowPeak optimal idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF110JOA, ENCFF419RSJ, ENCFF577CIY, ENCFF717NDQ 209513 ENCODE Processing Pipeline 132d647cfe6f35c66853b5033ea05b05 https://www.encodeproject.org/files/ENCFF100VYA/@@download/ENCFF100VYA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF777YSR bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF189PKR, ENCFF197TMV 5399571 ENCODE Processing Pipeline 2648b73e01a12bf1d770eab481d3b4cd https://www.encodeproject.org/files/ENCFF777YSR/@@download/ENCFF777YSR.bed.gz hg19 released missing unfiltered alignments ENCFF267PBD bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF189PKR, ENCFF197TMV, ENCFF578CTB 6518597 ENCODE Processing Pipeline 0a4010fb28336840612f4e3a90f0bd36 https://www.encodeproject.org/files/ENCFF267PBD/@@download/ENCFF267PBD.bed.gz hg19 released missing unfiltered alignments ENCFF828PUB bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF189PKR, ENCFF578CTB 5546344 ENCODE Processing Pipeline c47fb2cc45bcf3ff555033405150d4b0 https://www.encodeproject.org/files/ENCFF828PUB/@@download/ENCFF828PUB.bed.gz hg19 released missing unfiltered alignments ENCFF678UKK bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF002WSA, ENCFF280AEF, ENCFF949ENV 6350185 ENCODE Processing Pipeline 2551835d3f191855d8adae18b621e5e3 https://www.encodeproject.org/files/ENCFF678UKK/@@download/ENCFF678UKK.bed.gz GRCh38 released missing unfiltered alignments ENCFF808YPC bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF002WSA, ENCFF280AEF 5346386 ENCODE Processing Pipeline d12693d9d3fcbc3cdeb91c3d7afef09a https://www.encodeproject.org/files/ENCFF808YPC/@@download/ENCFF808YPC.bed.gz GRCh38 released missing unfiltered alignments ENCFF622SEO bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF002WSA, ENCFF949ENV 5209718 ENCODE Processing Pipeline a95a33862ee562b6b5966f64bd03b457 https://www.encodeproject.org/files/ENCFF622SEO/@@download/ENCFF622SEO.bed.gz GRCh38 released missing unfiltered alignments ENCFF895ZGS bed narrowPeak conservative idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF622SEO, ENCFF678UKK, ENCFF808YPC 84839 ENCODE Processing Pipeline 4457384fa6689d20db3e4524f7bc804e https://www.encodeproject.org/files/ENCFF895ZGS/@@download/ENCFF895ZGS.bed.gz GRCh38 released missing unfiltered alignments ENCFF563LGJ bed narrowPeak optimal idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF622SEO, ENCFF678UKK, ENCFF808YPC 122484 ENCODE Processing Pipeline 4a765afba563849acd43fff951aeb893 https://www.encodeproject.org/files/ENCFF563LGJ/@@download/ENCFF563LGJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF006PAK bed narrowPeak conservative idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF267PBD, ENCFF777YSR, ENCFF828PUB 69474 ENCODE Processing Pipeline ababe80d1949f5ff877d8575537b71e1 https://www.encodeproject.org/files/ENCFF006PAK/@@download/ENCFF006PAK.bed.gz hg19 released missing unfiltered alignments ENCFF619BDC bed narrowPeak optimal idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF267PBD, ENCFF777YSR, ENCFF828PUB 102575 ENCODE Processing Pipeline 3f2a8bb473746d1fb1310641b85ce509 https://www.encodeproject.org/files/ENCFF619BDC/@@download/ENCFF619BDC.bed.gz hg19 released missing unfiltered alignments ENCFF769MWV bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF477SGV, ENCFF551QCK 4718222 ENCODE Processing Pipeline 19256ba74f45415382b6ea8f51a7244a https://www.encodeproject.org/files/ENCFF769MWV/@@download/ENCFF769MWV.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF622THV bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF546AFS, ENCFF705ZEH 4834476 ENCODE Processing Pipeline a78791463de6509ad4f36b0cacb53445 https://www.encodeproject.org/files/ENCFF622THV/@@download/ENCFF622THV.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF626AAZ bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF477SGV, ENCFF546AFS, ENCFF551QCK, ENCFF705ZEH 6248155 ENCODE Processing Pipeline 3c16a9fa34574cb39077b028da90d179 https://www.encodeproject.org/files/ENCFF626AAZ/@@download/ENCFF626AAZ.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF260IOV bed narrowPeak conservative idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF622THV, ENCFF626AAZ, ENCFF769MWV 15938 ENCODE Processing Pipeline d8b65e9cb8984b6f9c549de80aa8b6ae https://www.encodeproject.org/files/ENCFF260IOV/@@download/ENCFF260IOV.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF033KXY bed narrowPeak optimal idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF622THV, ENCFF626AAZ, ENCFF769MWV 17570 ENCODE Processing Pipeline c90f03895f7cadf139446946d20832a2 https://www.encodeproject.org/files/ENCFF033KXY/@@download/ENCFF033KXY.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF800WMI bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF157WFG, ENCFF198JCQ, ENCFF308PSW, ENCFF372NDR 6174033 ENCODE Processing Pipeline f09ca1add0a3c8a3e067abfbd6b89d62 https://www.encodeproject.org/files/ENCFF800WMI/@@download/ENCFF800WMI.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF586LJA bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF157WFG, ENCFF308PSW 4739769 ENCODE Processing Pipeline a6d62eb90700bcdbdf231a363865a1d7 https://www.encodeproject.org/files/ENCFF586LJA/@@download/ENCFF586LJA.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF363KCU bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF372NDR 4768721 ENCODE Processing Pipeline 2395d1b3d24901d47d59648c74974b6d https://www.encodeproject.org/files/ENCFF363KCU/@@download/ENCFF363KCU.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF206MJS bed narrowPeak optimal idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF363KCU, ENCFF419RSJ, ENCFF586LJA, ENCFF800WMI 15551 ENCODE Processing Pipeline 02b18c003378b3efe5b4b035dcd08b15 https://www.encodeproject.org/files/ENCFF206MJS/@@download/ENCFF206MJS.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF012DPW bed narrowPeak conservative idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF363KCU, ENCFF419RSJ, ENCFF586LJA, ENCFF800WMI 14943 ENCODE Processing Pipeline 519d0ea3ca46a1e1658b04d4753b082d https://www.encodeproject.org/files/ENCFF012DPW/@@download/ENCFF012DPW.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF799KLQ bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF608UCM, ENCFF834TUP 7302595 ENCODE Processing Pipeline 0da9304d515c27247d0165e6bc65ba65 https://www.encodeproject.org/files/ENCFF799KLQ/@@download/ENCFF799KLQ.bed.gz hg19 released mild to moderate bottlenecking ENCFF797FYJ bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF819KCS, ENCFF834TUP 7147454 ENCODE Processing Pipeline 9b5870a34fff2d07acf06a7e8eb58f90 https://www.encodeproject.org/files/ENCFF797FYJ/@@download/ENCFF797FYJ.bed.gz hg19 released mild to moderate bottlenecking ENCFF770MXX bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF608UCM, ENCFF819KCS, ENCFF834TUP 7328583 ENCODE Processing Pipeline 761e4c1c347141bdfc481974a4d75db7 https://www.encodeproject.org/files/ENCFF770MXX/@@download/ENCFF770MXX.bed.gz hg19 released mild to moderate bottlenecking ENCFF526UKS bed narrowPeak conservative idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF770MXX, ENCFF797FYJ, ENCFF799KLQ 693900 ENCODE Processing Pipeline ce905593eb0cabf7dfedb1ec5f13ea07 https://www.encodeproject.org/files/ENCFF526UKS/@@download/ENCFF526UKS.bed.gz hg19 released mild to moderate bottlenecking ENCFF738WCE bed narrowPeak optimal idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF770MXX, ENCFF797FYJ, ENCFF799KLQ 836134 ENCODE Processing Pipeline f68cd3bad39ffbc3f6ceba8dd9405852 https://www.encodeproject.org/files/ENCFF738WCE/@@download/ENCFF738WCE.bed.gz hg19 released mild to moderate bottlenecking ENCFF453CHS bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF008IZS, ENCFF599IYT 7333070 ENCODE Processing Pipeline f249d5625433af4a976b488343574dd2 https://www.encodeproject.org/files/ENCFF453CHS/@@download/ENCFF453CHS.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF796VMI bed narrowPeak optimal idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF313FVM, ENCFF378FXV, ENCFF419RSJ, ENCFF453CHS 840969 ENCODE Processing Pipeline cc84cf4b01776c9894610ffbf9bb953c https://www.encodeproject.org/files/ENCFF796VMI/@@download/ENCFF796VMI.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF313FVM bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF599IYT 7318009 ENCODE Processing Pipeline c1d61ac32bdbaa9c41150ab4a4388a0d https://www.encodeproject.org/files/ENCFF313FVM/@@download/ENCFF313FVM.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF378FXV bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF008IZS 7078808 ENCODE Processing Pipeline 11e8adb2acbef5974b773d997816d254 https://www.encodeproject.org/files/ENCFF378FXV/@@download/ENCFF378FXV.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF605VXL bed narrowPeak conservative idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF313FVM, ENCFF378FXV, ENCFF419RSJ, ENCFF453CHS 695567 ENCODE Processing Pipeline cc32f60d69be7cc808e508a6a9ae9879 https://www.encodeproject.org/files/ENCFF605VXL/@@download/ENCFF605VXL.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF001VNO bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSI, ENCFF000YSJ 465250 Peggy Farnham, USC aa5a2a7e6d220638803775fcbf768e3e https://www.encodeproject.org/files/ENCFF001VNO/@@download/ENCFF001VNO.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF002CXA bed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSI, ENCFF000YSJ 130936 ENCODE Consortium Analysis Working Group 44c383b2a77c0adb37a0898c290fb584 https://www.encodeproject.org/files/ENCFF002CXA/@@download/ENCFF002CXA.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF811QWR bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF282OJT 6238078 ENCODE Processing Pipeline c863eb60784426b6be172bd9933ced69 https://www.encodeproject.org/files/ENCFF811QWR/@@download/ENCFF811QWR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF007QAA bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF282OJT, ENCFF997OPU 6759221 ENCODE Processing Pipeline d57794fde8102c7b0cb404948ea6c3d2 https://www.encodeproject.org/files/ENCFF007QAA/@@download/ENCFF007QAA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF591BIT bed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF007QAA, ENCFF401VYC, ENCFF811QWR 109809 ENCODE Processing Pipeline 3cbd8317834ea4a0b339e357c3badbe1 https://www.encodeproject.org/files/ENCFF591BIT/@@download/ENCFF591BIT.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF401VYC bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF997OPU 5607888 ENCODE Processing Pipeline eaa1674d9f3913d9ac45c3bc0d9f5f41 https://www.encodeproject.org/files/ENCFF401VYC/@@download/ENCFF401VYC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF016PZU bed narrowPeak conservative idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF007QAA, ENCFF401VYC, ENCFF811QWR 104182 ENCODE Processing Pipeline 12705056c7010bf8e6f71e45226d32a7 https://www.encodeproject.org/files/ENCFF016PZU/@@download/ENCFF016PZU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF745YFR bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF170NGB, ENCFF355SGP 5897867 ENCODE Processing Pipeline a633db35d0114fb5040184b527fa54d1 https://www.encodeproject.org/files/ENCFF745YFR/@@download/ENCFF745YFR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF351LUY bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF426DLJ 5199287 ENCODE Processing Pipeline 49e747dd868cfad84bd26221e9370ecf https://www.encodeproject.org/files/ENCFF351LUY/@@download/ENCFF351LUY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF905ZZX bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF170NGB, ENCFF355SGP, ENCFF426DLJ 6589321 ENCODE Processing Pipeline 6d1ff5378217060b24d44cafaaa05ca7 https://www.encodeproject.org/files/ENCFF905ZZX/@@download/ENCFF905ZZX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF821JKR bed narrowPeak conservative idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF351LUY, ENCFF419RSJ, ENCFF745YFR, ENCFF905ZZX 85206 ENCODE Processing Pipeline ed82cc20a0e0dcd78816ea3b83d7fcf8 https://www.encodeproject.org/files/ENCFF821JKR/@@download/ENCFF821JKR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF623ELO bed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF351LUY, ENCFF419RSJ, ENCFF745YFR, ENCFF905ZZX 89903 ENCODE Processing Pipeline 99942fd6c50b421da7144d15f9b304d1 https://www.encodeproject.org/files/ENCFF623ELO/@@download/ENCFF623ELO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, mixed read lengths, low read length inconsistent mapped reads lengths, missing unfiltered alignments insufficient read depth, insufficient read length ENCFF648RFW bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF084EMC, ENCFF705ZEH 4953053 ENCODE Processing Pipeline 003ea0a0ffa5b64321cb1dd310dd88df https://www.encodeproject.org/files/ENCFF648RFW/@@download/ENCFF648RFW.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF056OUU bed narrowPeak conservative idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF036VGX, ENCFF648RFW, ENCFF788AWO 16014 ENCODE Processing Pipeline 5f42da5b4e79bde9d54891c606a3f7f4 https://www.encodeproject.org/files/ENCFF056OUU/@@download/ENCFF056OUU.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF036VGX bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF173YSU, ENCFF477SGV 5188554 ENCODE Processing Pipeline 29ae6be478f6d1e855a650659b303726 https://www.encodeproject.org/files/ENCFF036VGX/@@download/ENCFF036VGX.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF788AWO bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF084EMC, ENCFF173YSU, ENCFF477SGV, ENCFF705ZEH 6582763 ENCODE Processing Pipeline 79cec121b6dc893b0ff6bbbb0ead043c https://www.encodeproject.org/files/ENCFF788AWO/@@download/ENCFF788AWO.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF768TJI bed narrowPeak optimal idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF036VGX, ENCFF648RFW, ENCFF788AWO 22390 ENCODE Processing Pipeline 00fee95f4f1764d51955ea63e1ac41fe https://www.encodeproject.org/files/ENCFF768TJI/@@download/ENCFF768TJI.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF234JHW bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF275XJW 5115499 ENCODE Processing Pipeline 72bbc03ca1eaed42953d9acb947d8167 https://www.encodeproject.org/files/ENCFF234JHW/@@download/ENCFF234JHW.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF389SYQ bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF733RTM 4943661 ENCODE Processing Pipeline 97946a4c356f6bfe13b1ab78f05ef026 https://www.encodeproject.org/files/ENCFF389SYQ/@@download/ENCFF389SYQ.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF404GRH bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF275XJW, ENCFF733RTM 6541886 ENCODE Processing Pipeline 2d73fb6b3b5609bcec17bce7cc0f5279 https://www.encodeproject.org/files/ENCFF404GRH/@@download/ENCFF404GRH.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF209OKY bed narrowPeak conservative idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF234JHW, ENCFF389SYQ, ENCFF404GRH, ENCFF419RSJ 15844 ENCODE Processing Pipeline 8b25431c86eeac4ca2d5b9d8728c0608 https://www.encodeproject.org/files/ENCFF209OKY/@@download/ENCFF209OKY.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF991ZSC bed narrowPeak optimal idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF234JHW, ENCFF389SYQ, ENCFF404GRH, ENCFF419RSJ 21270 ENCODE Processing Pipeline 8adf2bec91d77edc1bf53b8b6b388a0b https://www.encodeproject.org/files/ENCFF991ZSC/@@download/ENCFF991ZSC.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF521MOS bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM 4142355 ENCODE Processing Pipeline 585df9f882884542d2162608818d81f2 https://www.encodeproject.org/files/ENCFF521MOS/@@download/ENCFF521MOS.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF066ONU bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 1856755 ENCODE Processing Pipeline 14200e538b452e7bd169c4e2b53985d9 https://www.encodeproject.org/files/ENCFF066ONU/@@download/ENCFF066ONU.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF738BIG bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 4610777 ENCODE Processing Pipeline 512ab31f7689df6e2e25d6ab153dd82b https://www.encodeproject.org/files/ENCFF738BIG/@@download/ENCFF738BIG.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF615QOD bed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF066ONU, ENCFF521MOS, ENCFF738BIG 36527 ENCODE Processing Pipeline ecaec6d806ebba5fc4d05c9511f6de09 https://www.encodeproject.org/files/ENCFF615QOD/@@download/ENCFF615QOD.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF033EBX bed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF066ONU, ENCFF521MOS, ENCFF738BIG 62476 ENCODE Processing Pipeline 097bf841440b7b7f1ef9cb01097fd511 https://www.encodeproject.org/files/ENCFF033EBX/@@download/ENCFF033EBX.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF177MBE bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 1853408 ENCODE Processing Pipeline 6802e30d0f702fd8e080e71bed9e6948 https://www.encodeproject.org/files/ENCFF177MBE/@@download/ENCFF177MBE.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF247LOF bed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF123WWM, ENCFF177MBE, ENCFF419RSJ, ENCFF714RFQ 60929 ENCODE Processing Pipeline 58e643a89b9cf4aa01de67366da4a9be https://www.encodeproject.org/files/ENCFF247LOF/@@download/ENCFF247LOF.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF593FWV bed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF123WWM, ENCFF177MBE, ENCFF419RSJ, ENCFF714RFQ 36439 ENCODE Processing Pipeline c4ec33d07bf8e46483c6d78b023c6dd9 https://www.encodeproject.org/files/ENCFF593FWV/@@download/ENCFF593FWV.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF123WWM bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331BZT, ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 4599842 ENCODE Processing Pipeline fe2457bee3098b4961af1403df69948d https://www.encodeproject.org/files/ENCFF123WWM/@@download/ENCFF123WWM.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF714RFQ bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331BZT, ENCFF772PJM, ENCFF982BHL 4138309 ENCODE Processing Pipeline 2fb0653961f0ac954538b731da4319ae https://www.encodeproject.org/files/ENCFF714RFQ/@@download/ENCFF714RFQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF999XQG bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF359SKD, ENCFF434TTY, ENCFF846HRR 7222742 ENCODE Processing Pipeline ac11c8049c3ce981169abdc6c69c5266 https://www.encodeproject.org/files/ENCFF999XQG/@@download/ENCFF999XQG.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF847LNA bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF359SKD, ENCFF434TTY 7055585 ENCODE Processing Pipeline 0db6cf378fe8914bdee0eeae2d02fc08 https://www.encodeproject.org/files/ENCFF847LNA/@@download/ENCFF847LNA.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF162YHD bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF359SKD, ENCFF846HRR 6911168 ENCODE Processing Pipeline 5e8431bc30b30d1ab3f1b30703317636 https://www.encodeproject.org/files/ENCFF162YHD/@@download/ENCFF162YHD.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF510ADW bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF623HUN, ENCFF625AJO 6782293 ENCODE Processing Pipeline 47ede8ef0305a9fa5069bca691edac59 https://www.encodeproject.org/files/ENCFF510ADW/@@download/ENCFF510ADW.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF493OQN bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF212PQL, ENCFF623HUN 6946617 ENCODE Processing Pipeline 640db242d5014dd676fe5228665a3c03 https://www.encodeproject.org/files/ENCFF493OQN/@@download/ENCFF493OQN.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF840JEL bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF212PQL, ENCFF623HUN, ENCFF625AJO 7172738 ENCODE Processing Pipeline 7fdaf73dec2588017747b7ebf26013c6 https://www.encodeproject.org/files/ENCFF840JEL/@@download/ENCFF840JEL.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF563MXX bed narrowPeak conservative idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF493OQN, ENCFF510ADW, ENCFF840JEL 484088 ENCODE Processing Pipeline 6003362bcf68caf68da850dc025b97a7 https://www.encodeproject.org/files/ENCFF563MXX/@@download/ENCFF563MXX.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF042OZE bed narrowPeak optimal idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF493OQN, ENCFF510ADW, ENCFF840JEL 493827 ENCODE Processing Pipeline e79bd92c88ae067d27e3ebe933885b20 https://www.encodeproject.org/files/ENCFF042OZE/@@download/ENCFF042OZE.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF624CZP bed narrowPeak conservative idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF162YHD, ENCFF847LNA, ENCFF999XQG 412446 ENCODE Processing Pipeline 692d1e44ddcd7058604d10ceae315d5e https://www.encodeproject.org/files/ENCFF624CZP/@@download/ENCFF624CZP.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF462JFW bed narrowPeak optimal idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF162YHD, ENCFF847LNA, ENCFF999XQG 421045 ENCODE Processing Pipeline cbf4d9f37773b9077321587efc291d1d https://www.encodeproject.org/files/ENCFF462JFW/@@download/ENCFF462JFW.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF796SSH bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF552USH, ENCFF577QBK 6958561 ENCODE Processing Pipeline 8a9b82bc9d86cdea5b34591b1303d131 https://www.encodeproject.org/files/ENCFF796SSH/@@download/ENCFF796SSH.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF138CUL bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF552USH, ENCFF577QBK, ENCFF845ZLZ 7296018 ENCODE Processing Pipeline 9089567410de069c2ab8b031f9aabad5 https://www.encodeproject.org/files/ENCFF138CUL/@@download/ENCFF138CUL.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF373TEW bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF577QBK, ENCFF845ZLZ 6929023 ENCODE Processing Pipeline 70ec6f6f31e08f34de4b50bd339f9dd7 https://www.encodeproject.org/files/ENCFF373TEW/@@download/ENCFF373TEW.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF038KKT bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF093MXU, ENCFF106BHY 6757313 ENCODE Processing Pipeline da401500ae80663a4a0300b04f9cb17b https://www.encodeproject.org/files/ENCFF038KKT/@@download/ENCFF038KKT.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF524ZDS bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF093MXU, ENCFF623YPH 6831659 ENCODE Processing Pipeline 9e19bba4654b7bd5ecce706517fb17d3 https://www.encodeproject.org/files/ENCFF524ZDS/@@download/ENCFF524ZDS.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF379YGQ bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF093MXU, ENCFF106BHY, ENCFF623YPH 7230919 ENCODE Processing Pipeline 4307f31879c8d0528be68eea2255ae52 https://www.encodeproject.org/files/ENCFF379YGQ/@@download/ENCFF379YGQ.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF775TPP bed narrowPeak optimal idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF038KKT, ENCFF379YGQ, ENCFF419RSJ, ENCFF524ZDS 301964 ENCODE Processing Pipeline 10316078aed1474f674bbc99b20b1f4a https://www.encodeproject.org/files/ENCFF775TPP/@@download/ENCFF775TPP.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF131VZY bed narrowPeak conservative idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF038KKT, ENCFF379YGQ, ENCFF419RSJ, ENCFF524ZDS 243950 ENCODE Processing Pipeline 144c5c466457d13d60b2af3fb0ce2793 https://www.encodeproject.org/files/ENCFF131VZY/@@download/ENCFF131VZY.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF778RMG bed narrowPeak optimal idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF138CUL, ENCFF373TEW, ENCFF796SSH 253646 ENCODE Processing Pipeline b10e9ebc53d80fd09275ddc64ec080fb https://www.encodeproject.org/files/ENCFF778RMG/@@download/ENCFF778RMG.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF394WVZ bed narrowPeak conservative idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF138CUL, ENCFF373TEW, ENCFF796SSH 197309 ENCODE Processing Pipeline 63e73984e4425e3cbf06cb0ce7558780 https://www.encodeproject.org/files/ENCFF394WVZ/@@download/ENCFF394WVZ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF543QKR bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF117CKT, ENCFF574IJZ, ENCFF916QKW 7033796 ENCODE Processing Pipeline 99caf292082895bdef0a2b5f5c39929e https://www.encodeproject.org/files/ENCFF543QKR/@@download/ENCFF543QKR.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF816KBT bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF574IJZ, ENCFF916QKW 6588877 ENCODE Processing Pipeline 5abbf5c5eef77f27ff04b1ba5489df94 https://www.encodeproject.org/files/ENCFF816KBT/@@download/ENCFF816KBT.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF433SFB bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF117CKT, ENCFF574IJZ 6612953 ENCODE Processing Pipeline e560efe96923141e1f2da95dfb04ab90 https://www.encodeproject.org/files/ENCFF433SFB/@@download/ENCFF433SFB.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF987CKN bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF461OAN 6449753 ENCODE Processing Pipeline 7cdc4cd2bdbdc12c8edf52ed0d865d4d https://www.encodeproject.org/files/ENCFF987CKN/@@download/ENCFF987CKN.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF630YZV bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF433SUG 6430063 ENCODE Processing Pipeline 02466b5249a235587d20108f4cb90baf https://www.encodeproject.org/files/ENCFF630YZV/@@download/ENCFF630YZV.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF668REA bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF433SUG, ENCFF461OAN 6922323 ENCODE Processing Pipeline da87d4c92e2680035f2b40a7a5342b4c https://www.encodeproject.org/files/ENCFF668REA/@@download/ENCFF668REA.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF017JQJ bed narrowPeak optimal idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF630YZV, ENCFF668REA, ENCFF987CKN 482944 ENCODE Processing Pipeline 339764e3ef4038fa00edf4831cfadacd https://www.encodeproject.org/files/ENCFF017JQJ/@@download/ENCFF017JQJ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF599CTG bed narrowPeak conservative idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF630YZV, ENCFF668REA, ENCFF987CKN 466743 ENCODE Processing Pipeline 47922ef1344467b10f3895574c190815 https://www.encodeproject.org/files/ENCFF599CTG/@@download/ENCFF599CTG.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF644EZR bed narrowPeak conservative idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF433SFB, ENCFF543QKR, ENCFF816KBT 401666 ENCODE Processing Pipeline 0cf0e7db73fecb4e539bd97225721dbc https://www.encodeproject.org/files/ENCFF644EZR/@@download/ENCFF644EZR.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF120WOF bed narrowPeak optimal idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF433SFB, ENCFF543QKR, ENCFF816KBT 407319 ENCODE Processing Pipeline ad9c782b246e9bfbb2a00cdbb89a7885 https://www.encodeproject.org/files/ENCFF120WOF/@@download/ENCFF120WOF.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF530LEM bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF958RAN 5274330 ENCODE Processing Pipeline 2976755b3d2aaca90dab9b9f90bc820b https://www.encodeproject.org/files/ENCFF530LEM/@@download/ENCFF530LEM.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF644TNS bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF572OMD, ENCFF759PVZ 5160791 ENCODE Processing Pipeline 6bfa5f6bf5822a3bea2eb7fa002d3b3e https://www.encodeproject.org/files/ENCFF644TNS/@@download/ENCFF644TNS.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF274GZP bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF503JQK 4987638 ENCODE Processing Pipeline 39afa1485a491dd0b07f3a2c9f954816 https://www.encodeproject.org/files/ENCFF274GZP/@@download/ENCFF274GZP.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF442XTQ bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF361MTW, ENCFF503JQK 6261999 ENCODE Processing Pipeline 9510e6af8c5950d96724e5f85d61480e https://www.encodeproject.org/files/ENCFF442XTQ/@@download/ENCFF442XTQ.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF262DPM bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF361MTW 5107532 ENCODE Processing Pipeline ff9d0e272ed8771ec4ef1bb737156416 https://www.encodeproject.org/files/ENCFF262DPM/@@download/ENCFF262DPM.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF192IFJ bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF508DBG, ENCFF572OMD, ENCFF759PVZ, ENCFF958RAN 6427776 ENCODE Processing Pipeline 9344208dd7f4d437d626e0d79ddafdbf https://www.encodeproject.org/files/ENCFF192IFJ/@@download/ENCFF192IFJ.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF500ARI bed narrowPeak conservative idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF262DPM, ENCFF274GZP, ENCFF419RSJ, ENCFF442XTQ 46852 ENCODE Processing Pipeline 8d6385845c0399752fdb68dcb8b10824 https://www.encodeproject.org/files/ENCFF500ARI/@@download/ENCFF500ARI.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF137NMV bed narrowPeak conservative idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF192IFJ, ENCFF530LEM, ENCFF644TNS 43766 ENCODE Processing Pipeline 1c6065554450cecca473c16a3b270d08 https://www.encodeproject.org/files/ENCFF137NMV/@@download/ENCFF137NMV.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF688ARM bed narrowPeak optimal idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF262DPM, ENCFF274GZP, ENCFF419RSJ, ENCFF442XTQ 51122 ENCODE Processing Pipeline 38a4b430c3a24e7315b8cd6dca8134ac https://www.encodeproject.org/files/ENCFF688ARM/@@download/ENCFF688ARM.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF142CPK bed narrowPeak optimal idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF192IFJ, ENCFF530LEM, ENCFF644TNS 51659 ENCODE Processing Pipeline 9d78627b43ad26ec1f1ea21705cd7c92 https://www.encodeproject.org/files/ENCFF142CPK/@@download/ENCFF142CPK.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF002CMA bed narrowPeak optimal idr thresholded peaks ENCSR000BKM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 379332 ENCODE Consortium Analysis Working Group 375a3d9a300928e6b93f233463063ae9 https://www.encodeproject.org/files/ENCFF002CMA/@@download/ENCFF002CMA.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF002CLV bed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 754687 ENCODE Consortium Analysis Working Group 703c04df1ee5c8d5245c2751d593b317 https://www.encodeproject.org/files/ENCFF002CLV/@@download/ENCFF002CLV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample, characterization(s) pending review ENCFF178PTI bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF645IYJ 4230594 ENCODE Processing Pipeline e7a24eb01ffe31e6234de92ec1547908 https://www.encodeproject.org/files/ENCFF178PTI/@@download/ENCFF178PTI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review ENCFF913QDG bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF021CMK 4401711 ENCODE Processing Pipeline af0a13a9fda72df45edb4fc6dbc385c0 https://www.encodeproject.org/files/ENCFF913QDG/@@download/ENCFF913QDG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review ENCFF361DGT bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021CMK, ENCFF645IYJ 5111608 ENCODE Processing Pipeline 90b8af4e1e46a9f9acf4903cab5f580d https://www.encodeproject.org/files/ENCFF361DGT/@@download/ENCFF361DGT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review ENCFF561OGS bed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178PTI, ENCFF361DGT, ENCFF419RSJ, ENCFF913QDG 627927 ENCODE Processing Pipeline b45c5bffe7443eafc8922d733c211f2a https://www.encodeproject.org/files/ENCFF561OGS/@@download/ENCFF561OGS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, characterization(s) pending review ENCFF002CMY bed narrowPeak optimal idr thresholded peaks ENCSR000BKF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 82229 ENCODE Consortium Analysis Working Group 2ceb0000094de3d0931fe48293f28276 https://www.encodeproject.org/files/ENCFF002CMY/@@download/ENCFF002CMY.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF043YZF bed narrowPeak optimal idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF001TDO, ENCFF404ZDG, ENCFF700RYG, ENCFF804WBF 98778 ENCODE Processing Pipeline 35c35430c78f681d42182db300ec48a9 https://www.encodeproject.org/files/ENCFF043YZF/@@download/ENCFF043YZF.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF404ZDG bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF262CJE, ENCFF506DFV, ENCFF584YHO, ENCFF890PMJ 7160496 ENCODE Processing Pipeline e47da557586eb7ddb30ef039b8df8649 https://www.encodeproject.org/files/ENCFF404ZDG/@@download/ENCFF404ZDG.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF866QXR bed narrowPeak conservative idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF001TDO, ENCFF404ZDG, ENCFF700RYG, ENCFF804WBF 54773 ENCODE Processing Pipeline 47d90eded93641d95bc5213ab6fa1047 https://www.encodeproject.org/files/ENCFF866QXR/@@download/ENCFF866QXR.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF700RYG bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF262CJE, ENCFF506DFV, ENCFF584YHO 6326551 ENCODE Processing Pipeline d157d3b7aa72362fc82037deaf06629a https://www.encodeproject.org/files/ENCFF700RYG/@@download/ENCFF700RYG.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF804WBF bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF262CJE, ENCFF506DFV, ENCFF890PMJ 6701862 ENCODE Processing Pipeline 88d61b687f13462c227585bd884c04b5 https://www.encodeproject.org/files/ENCFF804WBF/@@download/ENCFF804WBF.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF766YHB bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF347QZM, ENCFF720AUK, ENCFF796JTX 6653869 ENCODE Processing Pipeline 7255a42d5a5bba6560efccff7c0b4158 https://www.encodeproject.org/files/ENCFF766YHB/@@download/ENCFF766YHB.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF697VRJ bed narrowPeak optimal idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF419RSJ, ENCFF747MEJ, ENCFF766YHB, ENCFF928EZI 97013 ENCODE Processing Pipeline 8203a101e2dc74caa9c493c67dc0f0a3 https://www.encodeproject.org/files/ENCFF697VRJ/@@download/ENCFF697VRJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF870ESB bed narrowPeak conservative idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF419RSJ, ENCFF747MEJ, ENCFF766YHB, ENCFF928EZI 55075 ENCODE Processing Pipeline 773a0f440403aa0fb803e2df1da8c3bb https://www.encodeproject.org/files/ENCFF870ESB/@@download/ENCFF870ESB.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF747MEJ bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF347QZM, ENCFF605ZNL, ENCFF720AUK, ENCFF796JTX 7168445 ENCODE Processing Pipeline 40736a7786f4be6af243861ae16bc42d https://www.encodeproject.org/files/ENCFF747MEJ/@@download/ENCFF747MEJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF928EZI bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF605ZNL, ENCFF720AUK, ENCFF796JTX 6308944 ENCODE Processing Pipeline 54920115ba76224279fea8f416ac7332 https://www.encodeproject.org/files/ENCFF928EZI/@@download/ENCFF928EZI.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF001VOP bed narrowPeak peaks ENCSR000EWD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 29015 Peggy Farnham, USC 74ed6582b9df786ac592b77a0b22cf1d https://www.encodeproject.org/files/ENCFF001VOP/@@download/ENCFF001VOP.bed.gz hg19 archived mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CXX bed narrowPeak optimal idr thresholded peaks ENCSR000EWD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 75057 ENCODE Consortium Analysis Working Group 3ad3b57662ab561f996e58a8c8bbd82b https://www.encodeproject.org/files/ENCFF002CXX/@@download/ENCFF002CXX.bed.gz hg19 archived mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF671OVE bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF117LCX, ENCFF160VXC 7000743 ENCODE Processing Pipeline 6128a1faa54737510c43c78ce33a8341 https://www.encodeproject.org/files/ENCFF671OVE/@@download/ENCFF671OVE.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF513RYM bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF464PKB, ENCFF834TUP 7019864 ENCODE Processing Pipeline 8a4ba87bbb665cd7592881e04722644b https://www.encodeproject.org/files/ENCFF513RYM/@@download/ENCFF513RYM.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF215LBC bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF117LCX, ENCFF160VXC, ENCFF464PKB, ENCFF834TUP 7247453 ENCODE Processing Pipeline 80089c9088b36cf66fd54bf9a024a8e7 https://www.encodeproject.org/files/ENCFF215LBC/@@download/ENCFF215LBC.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF973OME bed narrowPeak optimal idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF215LBC, ENCFF513RYM, ENCFF671OVE 404380 ENCODE Processing Pipeline 19ef8e287c2b6736403247c2b5842fef https://www.encodeproject.org/files/ENCFF973OME/@@download/ENCFF973OME.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF578SWL bed narrowPeak conservative idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF215LBC, ENCFF513RYM, ENCFF671OVE 357006 ENCODE Processing Pipeline 1c89e99464115b04700766624858774e https://www.encodeproject.org/files/ENCFF578SWL/@@download/ENCFF578SWL.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF506MLA bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF358HOW, ENCFF790TAN 7007806 ENCODE Processing Pipeline e7ab81cf77f80f93ab12adba474b1ab4 https://www.encodeproject.org/files/ENCFF506MLA/@@download/ENCFF506MLA.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF197KEG bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF036IOO, ENCFF712WXB 7011676 ENCODE Processing Pipeline 25da779ebf1630e3d426a9f118431db1 https://www.encodeproject.org/files/ENCFF197KEG/@@download/ENCFF197KEG.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF540KLM bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF036IOO, ENCFF358HOW, ENCFF712WXB, ENCFF790TAN 7253030 ENCODE Processing Pipeline af5fe5f2849bfb651fb4411852ab8619 https://www.encodeproject.org/files/ENCFF540KLM/@@download/ENCFF540KLM.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF596TWD bed narrowPeak conservative idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF197KEG, ENCFF419RSJ, ENCFF506MLA, ENCFF540KLM 358929 ENCODE Processing Pipeline 95c6309ea56b3edfdbe5a4f16bedc7aa https://www.encodeproject.org/files/ENCFF596TWD/@@download/ENCFF596TWD.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF454QQD bed narrowPeak optimal idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF197KEG, ENCFF419RSJ, ENCFF506MLA, ENCFF540KLM 409477 ENCODE Processing Pipeline 772a82f2af4913c70907f14868bbe9d7 https://www.encodeproject.org/files/ENCFF454QQD/@@download/ENCFF454QQD.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF686DEX bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF490YME 6764661 ENCODE Processing Pipeline 339648fd144d43e9f9ead1f0457cc4f6 https://www.encodeproject.org/files/ENCFF686DEX/@@download/ENCFF686DEX.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF565ADA bed narrowPeak conservative idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF673NII, ENCFF686DEX, ENCFF748JQT 7842 ENCODE Processing Pipeline b9ca9de77e9af0d7e4d60c4c27995e42 https://www.encodeproject.org/files/ENCFF565ADA/@@download/ENCFF565ADA.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF652NES bed narrowPeak optimal idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF673NII, ENCFF686DEX, ENCFF748JQT 16317 ENCODE Processing Pipeline a0c2cc1d1d1efce88907aa5363d135e5 https://www.encodeproject.org/files/ENCFF652NES/@@download/ENCFF652NES.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF748JQT bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF490YME, ENCFF794MPI 7221944 ENCODE Processing Pipeline 72916aba8bafc8cb14999bac17914f99 https://www.encodeproject.org/files/ENCFF748JQT/@@download/ENCFF748JQT.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF673NII bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF794MPI 6586688 ENCODE Processing Pipeline 9efc5df0fe779e4476592da4eabc766a https://www.encodeproject.org/files/ENCFF673NII/@@download/ENCFF673NII.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF248TTW bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF160VXC, ENCFF593YDQ, ENCFF834TUP, ENCFF927PKK 7216159 ENCODE Processing Pipeline 1112da394d3650229b3ebe1cf8bbbd23 https://www.encodeproject.org/files/ENCFF248TTW/@@download/ENCFF248TTW.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF302RJE bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF160VXC, ENCFF593YDQ 6620058 ENCODE Processing Pipeline c1eca67e5d636b2e1ffce3d0369a48d8 https://www.encodeproject.org/files/ENCFF302RJE/@@download/ENCFF302RJE.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF708LIZ bed narrowPeak conservative idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF001TDO, ENCFF248TTW, ENCFF302RJE, ENCFF507JPU 7468 ENCODE Processing Pipeline a90c858ec47788b6b5c67ca3a0deeaf7 https://www.encodeproject.org/files/ENCFF708LIZ/@@download/ENCFF708LIZ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF507JPU bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF834TUP, ENCFF927PKK 6761455 ENCODE Processing Pipeline 192e9a0745904e52ee8620b8be176c1b https://www.encodeproject.org/files/ENCFF507JPU/@@download/ENCFF507JPU.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF549GMO bed narrowPeak optimal idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF001TDO, ENCFF248TTW, ENCFF302RJE, ENCFF507JPU 18922 ENCODE Processing Pipeline df978590cd462b0053dd3bfc64f17142 https://www.encodeproject.org/files/ENCFF549GMO/@@download/ENCFF549GMO.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF002CMI bed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 532836 ENCODE Consortium Analysis Working Group 7fe8a69c0507eec9a25e61ba3bca8410 https://www.encodeproject.org/files/ENCFF002CMI/@@download/ENCFF002CMI.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF125TEX bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140UJB 6389450 ENCODE Processing Pipeline bcc60babc2cbc5fe323f83b0ddfd8011 https://www.encodeproject.org/files/ENCFF125TEX/@@download/ENCFF125TEX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF273XOJ bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140UJB, ENCFF569DZM 6982465 ENCODE Processing Pipeline a42601e81116724d570824c0fd0163d7 https://www.encodeproject.org/files/ENCFF273XOJ/@@download/ENCFF273XOJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF634MAL bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF569DZM 6576006 ENCODE Processing Pipeline c72e6c0fa31d60b4d09f812ceb5e5ddf https://www.encodeproject.org/files/ENCFF634MAL/@@download/ENCFF634MAL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF757ZGV bed narrowPeak conservative idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF125TEX, ENCFF273XOJ, ENCFF419RSJ, ENCFF634MAL 523928 ENCODE Processing Pipeline 5de4c0f1ed3d8f7300df63df129ec0c4 https://www.encodeproject.org/files/ENCFF757ZGV/@@download/ENCFF757ZGV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF182YZG bed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF125TEX, ENCFF273XOJ, ENCFF419RSJ, ENCFF634MAL 664881 ENCODE Processing Pipeline b944c338bd7ff9253c3498707b9b6b12 https://www.encodeproject.org/files/ENCFF182YZG/@@download/ENCFF182YZG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF735EGA bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF160VXC, ENCFF965SIW 6692518 ENCODE Processing Pipeline 6a302f9366a47443547a372527ca43ee https://www.encodeproject.org/files/ENCFF735EGA/@@download/ENCFF735EGA.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF497RBU bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF254NNQ, ENCFF834TUP 7172441 ENCODE Processing Pipeline 85544aad8c0d6fb0f2a0e380f554bd76 https://www.encodeproject.org/files/ENCFF497RBU/@@download/ENCFF497RBU.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF406JPU bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF160VXC, ENCFF254NNQ, ENCFF834TUP, ENCFF965SIW 7259842 ENCODE Processing Pipeline a4bc031f28c53690a1aadf54849668d3 https://www.encodeproject.org/files/ENCFF406JPU/@@download/ENCFF406JPU.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF297OMH bed narrowPeak conservative idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF406JPU, ENCFF497RBU, ENCFF735EGA 221244 ENCODE Processing Pipeline d4977f294535235cf778989c2dec3822 https://www.encodeproject.org/files/ENCFF297OMH/@@download/ENCFF297OMH.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF664ZGR bed narrowPeak optimal idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF406JPU, ENCFF497RBU, ENCFF735EGA 286705 ENCODE Processing Pipeline 99866240a9404333b974b22bd1667736 https://www.encodeproject.org/files/ENCFF664ZGR/@@download/ENCFF664ZGR.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF852JOM bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF315DCZ 7122748 ENCODE Processing Pipeline f9efad505808eb1be5230fcd9a4aaf96 https://www.encodeproject.org/files/ENCFF852JOM/@@download/ENCFF852JOM.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF492LLG bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF149WGG 6570700 ENCODE Processing Pipeline 36fcc01d2831f669db7f8c1f73f9cd15 https://www.encodeproject.org/files/ENCFF492LLG/@@download/ENCFF492LLG.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF477IDC bed narrowPeak conservative idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF272PSH, ENCFF419RSJ, ENCFF492LLG, ENCFF852JOM 221082 ENCODE Processing Pipeline fb2e2a70c2ef942d80157f996139f369 https://www.encodeproject.org/files/ENCFF477IDC/@@download/ENCFF477IDC.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF272PSH bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF149WGG, ENCFF315DCZ 7257859 ENCODE Processing Pipeline 9dac8e1c7d8822de2b7787d37b2e8918 https://www.encodeproject.org/files/ENCFF272PSH/@@download/ENCFF272PSH.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF023XHV bed narrowPeak optimal idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF272PSH, ENCFF419RSJ, ENCFF492LLG, ENCFF852JOM 289552 ENCODE Processing Pipeline 054dea6f6c2879fc4cb6179c342a2214 https://www.encodeproject.org/files/ENCFF023XHV/@@download/ENCFF023XHV.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF001VCR bed narrowPeak peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 395909 Peggy Farnham, USC dad2b246ea317d2b49316952132b480e https://www.encodeproject.org/files/ENCFF001VCR/@@download/ENCFF001VCR.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF112BHN bed narrowPeak peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 1 ENCFF355SGP, ENCFF611YPB 689559 ENCODE Processing Pipeline e5a2437cb852c65200ddb69f35d885f6 https://www.encodeproject.org/files/ENCFF112BHN/@@download/ENCFF112BHN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample ENCFF337VUR bed narrowPeak peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 2 ENCFF355SGP, ENCFF706SCF 605810 ENCODE Processing Pipeline c75ce200957df4aa28f9cb1d0148472e https://www.encodeproject.org/files/ENCFF337VUR/@@download/ENCFF337VUR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample ENCFF645GPE bed narrowPeak peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF355SGP, ENCFF611YPB, ENCFF706SCF 614207 ENCODE Processing Pipeline b8d161c9ef9c2f0b5db07a29cee1e4f0 https://www.encodeproject.org/files/ENCFF645GPE/@@download/ENCFF645GPE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample ENCFF961SPZ bed narrowPeak replicated peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF112BHN, ENCFF337VUR, ENCFF645GPE 668981 ENCODE Processing Pipeline 680df6c3c0db2033541cb544805b719b https://www.encodeproject.org/files/ENCFF961SPZ/@@download/ENCFF961SPZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample ENCFF261REY bed narrowPeak peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 2 ENCFF051ZZR, ENCFF217HOS 605446 ENCODE Processing Pipeline 9aae4e3374dadf81b80c6fc6e9be2fc9 https://www.encodeproject.org/files/ENCFF261REY/@@download/ENCFF261REY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample ENCFF883POK bed narrowPeak replicated peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF258PHY, ENCFF261REY, ENCFF757WPX 669085 ENCODE Processing Pipeline f0561b333761ff43aa06fcce76cae19e https://www.encodeproject.org/files/ENCFF883POK/@@download/ENCFF883POK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample ENCFF757WPX bed narrowPeak peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 1 ENCFF051ZZR, ENCFF955ZVN 689261 ENCODE Processing Pipeline 8f7595f5ffdcb7ed288c794b62b38e07 https://www.encodeproject.org/files/ENCFF757WPX/@@download/ENCFF757WPX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample ENCFF258PHY bed narrowPeak peaks ENCSR000EWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000ANG DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF051ZZR, ENCFF217HOS, ENCFF955ZVN 613237 ENCODE Processing Pipeline 16bbd61b5e8ca3be40d37a7c2ce48826 https://www.encodeproject.org/files/ENCFF258PHY/@@download/ENCFF258PHY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample ENCFF001VCQ bed narrowPeak peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 2004379 Peggy Farnham, USC 8664dfcb4d4d7fc30f05b0b71d7bed49 https://www.encodeproject.org/files/ENCFF001VCQ/@@download/ENCFF001VCQ.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF971OQL bed narrowPeak peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 2 ENCFF063EDR, ENCFF355SGP 2477744 ENCODE Processing Pipeline d8a811fd21b2e16772915bd1e3088982 https://www.encodeproject.org/files/ENCFF971OQL/@@download/ENCFF971OQL.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF501DZN bed narrowPeak peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 1, 2 ENCFF063EDR, ENCFF290LQY, ENCFF355SGP 2936093 ENCODE Processing Pipeline 1bdff450d0299a6719a292b19972fe83 https://www.encodeproject.org/files/ENCFF501DZN/@@download/ENCFF501DZN.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF159VKJ bed narrowPeak replicated peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 1, 2 ENCFF501DZN, ENCFF712TSU, ENCFF971OQL 2724281 ENCODE Processing Pipeline 0db8f1cdd1a82dd72b8da0f128b162a6 https://www.encodeproject.org/files/ENCFF159VKJ/@@download/ENCFF159VKJ.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF712TSU bed narrowPeak peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 1 ENCFF290LQY, ENCFF355SGP 4519629 ENCODE Processing Pipeline 39ff9f5bc30a1d03ca0e68aec11ae1b4 https://www.encodeproject.org/files/ENCFF712TSU/@@download/ENCFF712TSU.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF914PQZ bed narrowPeak peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 1 ENCFF051ZZR, ENCFF196QGZ 4519512 ENCODE Processing Pipeline 12f8311b5f5a2540dfcfeda2a8211405 https://www.encodeproject.org/files/ENCFF914PQZ/@@download/ENCFF914PQZ.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF078UPL bed narrowPeak peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 2 ENCFF051ZZR, ENCFF825PKH 2489279 ENCODE Processing Pipeline 64b9d0f6ad035094bc235e810243448f https://www.encodeproject.org/files/ENCFF078UPL/@@download/ENCFF078UPL.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF730VTO bed narrowPeak replicated peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 1, 2 ENCFF078UPL, ENCFF564QIG, ENCFF914PQZ 2688164 ENCODE Processing Pipeline 7622ab38f1105ec9c0b595b6768a9378 https://www.encodeproject.org/files/ENCFF730VTO/@@download/ENCFF730VTO.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF564QIG bed narrowPeak peaks ENCSR000EWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ANE DNA see document see document False 2011-10-07 ENCODE 1, 2 ENCFF051ZZR, ENCFF196QGZ, ENCFF825PKH 2944154 ENCODE Processing Pipeline e5c635d7ec4d69373ca3baad3b88e49a https://www.encodeproject.org/files/ENCFF564QIG/@@download/ENCFF564QIG.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF260JMM bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF318HXV, ENCFF834TUP 7100744 ENCODE Processing Pipeline 088d643e4c1e293ba708b5d62b327189 https://www.encodeproject.org/files/ENCFF260JMM/@@download/ENCFF260JMM.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF431KXB bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF160VXC, ENCFF318HXV, ENCFF834TUP, ENCFF899ORC 7285470 ENCODE Processing Pipeline 45bdf9d882d751aef8b239239586d983 https://www.encodeproject.org/files/ENCFF431KXB/@@download/ENCFF431KXB.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF191KTX bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF160VXC, ENCFF899ORC 6850176 ENCODE Processing Pipeline d6d781cc28f8d5798a2b30c9215d71be https://www.encodeproject.org/files/ENCFF191KTX/@@download/ENCFF191KTX.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF059ONJ bed narrowPeak optimal idr thresholded peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF191KTX, ENCFF260JMM, ENCFF431KXB 698405 ENCODE Processing Pipeline b90c66a28237946beae947f6c6d02cdd https://www.encodeproject.org/files/ENCFF059ONJ/@@download/ENCFF059ONJ.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF885QLV bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF698VVG 7159991 ENCODE Processing Pipeline 83a3d7a31df632d5bf2ccb1b30e56313 https://www.encodeproject.org/files/ENCFF885QLV/@@download/ENCFF885QLV.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF682WFJ bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF803TYM 6857662 ENCODE Processing Pipeline 45cced03fe00f90cfc53814c79c64799 https://www.encodeproject.org/files/ENCFF682WFJ/@@download/ENCFF682WFJ.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF415QOB bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF698VVG, ENCFF803TYM 7278240 ENCODE Processing Pipeline 963f05c1b890c4068741c4b4bb694c2e https://www.encodeproject.org/files/ENCFF415QOB/@@download/ENCFF415QOB.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF926CRV bed narrowPeak optimal idr thresholded peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF415QOB, ENCFF419RSJ, ENCFF682WFJ, ENCFF885QLV 697021 ENCODE Processing Pipeline 42dc879ba07ade844e614f635def9031 https://www.encodeproject.org/files/ENCFF926CRV/@@download/ENCFF926CRV.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF001VOV bed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 22633 Michael Snyder, Stanford 486e77ed088efb5ef805a0510c9b024b https://www.encodeproject.org/files/ENCFF001VOV/@@download/ENCFF001VOV.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF002CYD bed narrowPeak optimal idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 54441 ENCODE Consortium Analysis Working Group e8bdf374770a425d884ec74e902338b6 https://www.encodeproject.org/files/ENCFF002CYD/@@download/ENCFF002CYD.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF763YXP bed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF440UUU 2052776 ENCODE Processing Pipeline 291f711da6540d9f17763904a9aa0e40 https://www.encodeproject.org/files/ENCFF763YXP/@@download/ENCFF763YXP.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF956SIV bed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF440UUU, ENCFF739PBB 158227 ENCODE Processing Pipeline ecad71f4993868d696e98ca101678310 https://www.encodeproject.org/files/ENCFF956SIV/@@download/ENCFF956SIV.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF077EAD bed narrowPeak conservative idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF585NXD, ENCFF763YXP, ENCFF956SIV 8866 ENCODE Processing Pipeline 74daa78d138749f85d51db3d7ef6001d https://www.encodeproject.org/files/ENCFF077EAD/@@download/ENCFF077EAD.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF498DOQ bed narrowPeak optimal idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF585NXD, ENCFF763YXP, ENCFF956SIV 18040 ENCODE Processing Pipeline cabac0bdd4bc42dfea03b1f763d569c8 https://www.encodeproject.org/files/ENCFF498DOQ/@@download/ENCFF498DOQ.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF585NXD bed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF739PBB 2492541 ENCODE Processing Pipeline fa09b91df9b9e0ad5cd4892b4d9449f9 https://www.encodeproject.org/files/ENCFF585NXD/@@download/ENCFF585NXD.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length, insufficient replicate concordance ENCFF789HHG bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF224GTG, ENCFF321CYT 4774722 ENCODE Processing Pipeline 2b980e8a647d156579335201a39ef984 https://www.encodeproject.org/files/ENCFF789HHG/@@download/ENCFF789HHG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF690XXK bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF456BYT, ENCFF818HIH 5047502 ENCODE Processing Pipeline fa771e766c74b2ac2c02538825850bed https://www.encodeproject.org/files/ENCFF690XXK/@@download/ENCFF690XXK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF151HYU bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF224GTG, ENCFF321CYT, ENCFF456BYT, ENCFF818HIH 6362327 ENCODE Processing Pipeline c316effd94b7f25ca9f99bbb89663fa4 https://www.encodeproject.org/files/ENCFF151HYU/@@download/ENCFF151HYU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF617CAZ bed narrowPeak optimal idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF151HYU, ENCFF690XXK, ENCFF789HHG 14792 ENCODE Processing Pipeline 454b3aaf30cc5d814dc031bb5e8ca333 https://www.encodeproject.org/files/ENCFF617CAZ/@@download/ENCFF617CAZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF975SNX bed narrowPeak conservative idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF151HYU, ENCFF690XXK, ENCFF789HHG 10928 ENCODE Processing Pipeline 3e6254c2f3895cc2ed733012a597f5f6 https://www.encodeproject.org/files/ENCFF975SNX/@@download/ENCFF975SNX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF603GHG bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF641OBF, ENCFF661ZRO 4971802 ENCODE Processing Pipeline d37cf813e2e91871901aa7e7d88da0e6 https://www.encodeproject.org/files/ENCFF603GHG/@@download/ENCFF603GHG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF346NMC bed narrowPeak conservative idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010DBI, ENCFF419RSJ, ENCFF603GHG, ENCFF979TPQ 9205 ENCODE Processing Pipeline 98ce6d730ab5245aa16eba89d8f019a2 https://www.encodeproject.org/files/ENCFF346NMC/@@download/ENCFF346NMC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF010DBI bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF408GAN, ENCFF872FDX 4768702 ENCODE Processing Pipeline ad202b7b7bb662274f63c91c08feabad https://www.encodeproject.org/files/ENCFF010DBI/@@download/ENCFF010DBI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF979TPQ bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF408GAN, ENCFF641OBF, ENCFF661ZRO, ENCFF872FDX 6235743 ENCODE Processing Pipeline c01d1a59261478c3f7b54959e1a1e8cb https://www.encodeproject.org/files/ENCFF979TPQ/@@download/ENCFF979TPQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF710LLF bed narrowPeak optimal idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010DBI, ENCFF419RSJ, ENCFF603GHG, ENCFF979TPQ 13465 ENCODE Processing Pipeline 8feb6509c8f0d41bf06713a6127b027c https://www.encodeproject.org/files/ENCFF710LLF/@@download/ENCFF710LLF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length experiment not submitted to GEO ENCFF452PIY bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092ACZ, ENCFF677HTP 5762842 ENCODE Processing Pipeline b7329c65f34508967b1dd2c81c466aed https://www.encodeproject.org/files/ENCFF452PIY/@@download/ENCFF452PIY.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF949DLB bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033ACD, ENCFF092ACZ, ENCFF677HTP, ENCFF839YOM 6806702 ENCODE Processing Pipeline 2ec7e64ed4b7018117a83b7f263f621f https://www.encodeproject.org/files/ENCFF949DLB/@@download/ENCFF949DLB.bed.gz hg19 released low read depth missing unfiltered alignments, mismatched status ENCFF696SWI bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033ACD, ENCFF839YOM 5763732 ENCODE Processing Pipeline 82bc8dc22f3abb4669443c977af2f5c4 https://www.encodeproject.org/files/ENCFF696SWI/@@download/ENCFF696SWI.bed.gz hg19 released low read depth missing unfiltered alignments, mismatched status ENCFF459XMM bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF283ZIL 5535441 ENCODE Processing Pipeline 9f36fa5536e07057a8bd55924ecf5b34 https://www.encodeproject.org/files/ENCFF459XMM/@@download/ENCFF459XMM.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF373MAQ bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF903JXA 5517753 ENCODE Processing Pipeline c44fbb416faed138bc2700cb3ca57560 https://www.encodeproject.org/files/ENCFF373MAQ/@@download/ENCFF373MAQ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF223LCM bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF283ZIL, ENCFF903JXA 6646058 ENCODE Processing Pipeline e286163625de797d410634fe70bc0aa8 https://www.encodeproject.org/files/ENCFF223LCM/@@download/ENCFF223LCM.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF213EHL bed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF223LCM, ENCFF373MAQ, ENCFF419RSJ, ENCFF459XMM 112827 ENCODE Processing Pipeline e870575eff4d1e6f09e3962b18bac47c https://www.encodeproject.org/files/ENCFF213EHL/@@download/ENCFF213EHL.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF641AXD bed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF223LCM, ENCFF373MAQ, ENCFF419RSJ, ENCFF459XMM 137540 ENCODE Processing Pipeline 7e814721301eb261472ed85b8adbeed3 https://www.encodeproject.org/files/ENCFF641AXD/@@download/ENCFF641AXD.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF588UCZ bed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF452PIY, ENCFF696SWI, ENCFF949DLB 123356 ENCODE Processing Pipeline 48a49f9db1953c2afcbdcac760b25d65 https://www.encodeproject.org/files/ENCFF588UCZ/@@download/ENCFF588UCZ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF605XWU bed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF452PIY, ENCFF696SWI, ENCFF949DLB 99828 ENCODE Processing Pipeline 6e8f01890c80cd8d09ab802ad05dce9b https://www.encodeproject.org/files/ENCFF605XWU/@@download/ENCFF605XWU.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF671MKW bed narrowPeak peaks ENCSR000APD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K79me2-human ENCAB000ANH DNA see document see document False 2011-02-10 ENCODE 2 ENCFF171KRI, ENCFF574XYY 2212148 ENCODE Processing Pipeline 5c5c664ac6a6bb799a77770099f2e0ee https://www.encodeproject.org/files/ENCFF671MKW/@@download/ENCFF671MKW.bed.gz hg19 released inconsistent platforms, low read length insufficient read depth ENCFF392BQI bed narrowPeak peaks ENCSR000APD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K79me2-human ENCAB000ANH DNA see document see document False 2011-02-10 ENCODE 1 ENCFF294MOL, ENCFF574XYY 2014750 ENCODE Processing Pipeline 047bc2f2d0a0f7dbe1a80a195083d32d https://www.encodeproject.org/files/ENCFF392BQI/@@download/ENCFF392BQI.bed.gz hg19 released inconsistent platforms, low read length insufficient read depth ENCFF350GQM bed narrowPeak peaks ENCSR000APD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K79me2-human ENCAB000ANH DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF171KRI, ENCFF294MOL, ENCFF574XYY 1732269 ENCODE Processing Pipeline 7a130a7cf8a38a3cd7bba7a5f32a4425 https://www.encodeproject.org/files/ENCFF350GQM/@@download/ENCFF350GQM.bed.gz hg19 released inconsistent platforms, low read length insufficient read depth ENCFF354QXX bed narrowPeak peaks ENCSR000APD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K79me2-human ENCAB000ANH DNA see document see document False 2011-02-10 ENCODE 1 ENCFF392XRJ, ENCFF947DVY 2011816 ENCODE Processing Pipeline 9f2b1cce6e37293bc23611aee6b562b5 https://www.encodeproject.org/files/ENCFF354QXX/@@download/ENCFF354QXX.bed.gz GRCh38 released inconsistent platforms, low read length insufficient read depth ENCFF832FOY bed narrowPeak peaks ENCSR000APD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K79me2-human ENCAB000ANH DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF408YHI 2305631 ENCODE Processing Pipeline 4662000dcfc257bb9a3d35335686a4df https://www.encodeproject.org/files/ENCFF832FOY/@@download/ENCFF832FOY.bed.gz GRCh38 released inconsistent platforms, low read length insufficient read depth ENCFF025ZVV bed narrowPeak peaks ENCSR000APD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K79me2-human ENCAB000ANH DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF392XRJ, ENCFF408YHI, ENCFF947DVY 1729682 ENCODE Processing Pipeline 7d2e9e244193c0f6c9eedb98a004c962 https://www.encodeproject.org/files/ENCFF025ZVV/@@download/ENCFF025ZVV.bed.gz GRCh38 released inconsistent platforms, low read length insufficient read depth ENCFF769WZF bed narrowPeak replicated peaks ENCSR000APD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K79me2-human ENCAB000ANH DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF350GQM, ENCFF392BQI, ENCFF671MKW 1975636 ENCODE Processing Pipeline 3cf355403986c7945b5d2f0cdb299d4c https://www.encodeproject.org/files/ENCFF769WZF/@@download/ENCFF769WZF.bed.gz hg19 released inconsistent platforms, low read length insufficient read depth ENCFF212PQN bed narrowPeak replicated peaks ENCSR000APD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K79me2-human ENCAB000ANH DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF025ZVV, ENCFF354QXX, ENCFF832FOY 1967252 ENCODE Processing Pipeline 6b2d2205d4617091292e2a5fabb3f280 https://www.encodeproject.org/files/ENCFF212PQN/@@download/ENCFF212PQN.bed.gz GRCh38 released inconsistent platforms, low read length insufficient read depth ENCFF001VMN bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 48236 Sherman Weissman, Yale 50b07ca6d4aab39d6d36941093ee1e2f https://www.encodeproject.org/files/ENCFF001VMN/@@download/ENCFF001VMN.bed.gz hg19 archived mixed read lengths, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CWB bed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 159843 ENCODE Consortium Analysis Working Group 434c22a477db41bc83f31dc6197c638d https://www.encodeproject.org/files/ENCFF002CWB/@@download/ENCFF002CWB.bed.gz hg19 archived mixed read lengths, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF436KCV bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF691WRY, ENCFF793SYX 4310569 ENCODE Processing Pipeline cdf4ec1b8015e105b4b5e12560ceb1fa https://www.encodeproject.org/files/ENCFF436KCV/@@download/ENCFF436KCV.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF052OWI bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF691WRY 2438263 ENCODE Processing Pipeline 8e39fba942c4a657192a5716e9c84702 https://www.encodeproject.org/files/ENCFF052OWI/@@download/ENCFF052OWI.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF394RSM bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF793SYX 2131563 ENCODE Processing Pipeline 14ba65ae5c45d842c41cd3fc22b91023 https://www.encodeproject.org/files/ENCFF394RSM/@@download/ENCFF394RSM.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF618VRU bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF482LDC, ENCFF814CHV 2400958 ENCODE Processing Pipeline 9213baf30ca20a911d24ec577c36c487 https://www.encodeproject.org/files/ENCFF618VRU/@@download/ENCFF618VRU.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF192BTP bed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF052OWI, ENCFF394RSM, ENCFF436KCV 111175 ENCODE Processing Pipeline f6d9722fc246ece97dc02a364d78a156 https://www.encodeproject.org/files/ENCFF192BTP/@@download/ENCFF192BTP.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF546PAM bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF050LIC, ENCFF482LDC 2119187 ENCODE Processing Pipeline 6fb8c400d06b6c74f5c940433c13b188 https://www.encodeproject.org/files/ENCFF546PAM/@@download/ENCFF546PAM.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF527WUV bed narrowPeak conservative idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF052OWI, ENCFF394RSM, ENCFF436KCV 93899 ENCODE Processing Pipeline 32d291509934a841c40d53ff33256853 https://www.encodeproject.org/files/ENCFF527WUV/@@download/ENCFF527WUV.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF023XYC bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF050LIC, ENCFF482LDC, ENCFF814CHV 4296452 ENCODE Processing Pipeline 7babc54db99f0be5e36fd9335d46b925 https://www.encodeproject.org/files/ENCFF023XYC/@@download/ENCFF023XYC.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF058LTT bed narrowPeak conservative idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023XYC, ENCFF419RSJ, ENCFF546PAM, ENCFF618VRU 90163 ENCODE Processing Pipeline d05615565c6f8b7164cfb8592e32fa37 https://www.encodeproject.org/files/ENCFF058LTT/@@download/ENCFF058LTT.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF881AVX bed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023XYC, ENCFF419RSJ, ENCFF546PAM, ENCFF618VRU 109084 ENCODE Processing Pipeline 53d7ceedc495abecf48529eda56f93a9 https://www.encodeproject.org/files/ENCFF881AVX/@@download/ENCFF881AVX.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF001WBE bed narrowPeak peaks ENCSR000EPC DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNA see document see document False 2010-12-14 ENCODE 1 ENCFF001BSI 2326750 John Stamatoyannopoulos, UW 86eecc69fec77ead878fbe77b5ec20ad https://www.encodeproject.org/files/ENCFF001WBE/@@download/ENCFF001WBE.bed.gz hg19 archived insufficient read depth, mixed read lengths insufficient read length, insufficient replicate concordance ENCFF001WNO bed narrowPeak peaks ENCSR000EPC DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNA see document see document False 2010-12-14 ENCODE 2 ENCFF001DPC 1715821 John Stamatoyannopoulos, UW 4adce964573cc45ce1886b62df4b1c93 https://www.encodeproject.org/files/ENCFF001WNO/@@download/ENCFF001WNO.bed.gz hg19 archived insufficient read depth, mixed read lengths insufficient read length, insufficient replicate concordance ENCFF001WNN bed narrowPeak peaks ENCSR000EPC DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNA see document see document False 2010-12-14 ENCODE 1 ENCFF001DOX 1734368 John Stamatoyannopoulos, UW debf79adc0251e8b88b0d5604e79a9bf https://www.encodeproject.org/files/ENCFF001WNN/@@download/ENCFF001WNN.bed.gz hg19 archived insufficient read depth, mixed read lengths insufficient read length, insufficient replicate concordance ENCFF567LWS bed narrowPeak peaks ENCSR000EPC DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNA see document see document False 2010-12-14 ENCODE 1 ENCFF448LJP, ENCFF992CZQ 1686785 ENCODE Processing Pipeline 318d7e73f59bf2da2f1f76272d25c231 https://www.encodeproject.org/files/ENCFF567LWS/@@download/ENCFF567LWS.bed.gz GRCh38 released insufficient read depth, mixed read lengths insufficient read length, insufficient replicate concordance ENCFF422QRZ bed narrowPeak peaks ENCSR000EPC DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNA see document see document False 2010-12-14 ENCODE 2 ENCFF810RGM, ENCFF992CZQ 544094 ENCODE Processing Pipeline 6e4ef3cf03a955e91b0354eee4cef919 https://www.encodeproject.org/files/ENCFF422QRZ/@@download/ENCFF422QRZ.bed.gz GRCh38 released insufficient read depth, mixed read lengths insufficient read length, insufficient replicate concordance ENCFF346RKC bed narrowPeak peaks ENCSR000EPC DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNA see document see document False 2010-12-14 ENCODE 1 ENCFF163ZHO, ENCFF635BQF 1679288 ENCODE Processing Pipeline 50ff26a6aa905d0e376c96cfd7af85cd https://www.encodeproject.org/files/ENCFF346RKC/@@download/ENCFF346RKC.bed.gz hg19 released insufficient read depth, mixed read lengths insufficient read length, insufficient replicate concordance ENCFF881JKB bed narrowPeak peaks ENCSR000EPC DNase-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNA see document see document False 2010-12-14 ENCODE 2 ENCFF163ZHO, ENCFF484USH 539342 ENCODE Processing Pipeline 6716692c8dda3e4c2d2b09b87ebecf7d https://www.encodeproject.org/files/ENCFF881JKB/@@download/ENCFF881JKB.bed.gz hg19 released insufficient read depth, mixed read lengths insufficient read length, insufficient replicate concordance ENCFF001VPN bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 6987 Peggy Farnham, USC 486d091c324ba33cf3e46740180ccdf7 https://www.encodeproject.org/files/ENCFF001VPN/@@download/ENCFF001VPN.bed.gz hg19 archived inconsistent mapped reads lengths, missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYT bed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 7610 ENCODE Consortium Analysis Working Group b832826c9a2c89cd02efba3c468be676 https://www.encodeproject.org/files/ENCFF002CYT/@@download/ENCFF002CYT.bed.gz hg19 archived inconsistent mapped reads lengths, missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF883FSC bed narrowPeak conservative idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF107VAF, ENCFF419RSJ, ENCFF641RNP, ENCFF946QMH 6549 ENCODE Processing Pipeline 741d83b1be98f8b196f1317bef91ba78 https://www.encodeproject.org/files/ENCFF883FSC/@@download/ENCFF883FSC.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF323AWS bed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF107VAF, ENCFF419RSJ, ENCFF641RNP, ENCFF946QMH 7515 ENCODE Processing Pipeline d9d7782ccf01187a959d1c8b960d9165 https://www.encodeproject.org/files/ENCFF323AWS/@@download/ENCFF323AWS.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF641RNP bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF419SAY, ENCFF917UQJ 5057158 ENCODE Processing Pipeline 5da2ddeb380094b8f07b7875385f3b69 https://www.encodeproject.org/files/ENCFF641RNP/@@download/ENCFF641RNP.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF107VAF bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF419SAY 3759397 ENCODE Processing Pipeline 64e11601753af2b69268ee25d8b4e838 https://www.encodeproject.org/files/ENCFF107VAF/@@download/ENCFF107VAF.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF946QMH bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF917UQJ 4469699 ENCODE Processing Pipeline b798da7121cdb7bd1038415f164fd683 https://www.encodeproject.org/files/ENCFF946QMH/@@download/ENCFF946QMH.bed.gz GRCh38 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF836LBG bed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF337RTD, ENCFF556HBG, ENCFF565OZP 7351 ENCODE Processing Pipeline ee40819a3e319921e26d72427860725d https://www.encodeproject.org/files/ENCFF836LBG/@@download/ENCFF836LBG.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF556HBG bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF232PMQ 3877075 ENCODE Processing Pipeline 7b1aef55c64986987534c8007ecdb9d7 https://www.encodeproject.org/files/ENCFF556HBG/@@download/ENCFF556HBG.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF337RTD bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF656PTN 4049903 ENCODE Processing Pipeline 34a201468fe2cc830b77ab03cb4dab1e https://www.encodeproject.org/files/ENCFF337RTD/@@download/ENCFF337RTD.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF565OZP bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF232PMQ, ENCFF656PTN 5185896 ENCODE Processing Pipeline fc998cd8fd37762830baf54b29fc2691 https://www.encodeproject.org/files/ENCFF565OZP/@@download/ENCFF565OZP.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF250QWW bed narrowPeak conservative idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF337RTD, ENCFF556HBG, ENCFF565OZP 7168 ENCODE Processing Pipeline 273ee6f9d917693d1e67568a730f052d https://www.encodeproject.org/files/ENCFF250QWW/@@download/ENCFF250QWW.bed.gz hg19 released inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF816IQF bed narrowPeak peaks ENCSR000AKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANK DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF103YPC, ENCFF392XRJ, ENCFF698ROL 887435 ENCODE Processing Pipeline 4203242e7d285494c8131a7582edc3cd https://www.encodeproject.org/files/ENCFF816IQF/@@download/ENCFF816IQF.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF418BIN bed narrowPeak peaks ENCSR000AKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANK DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF355NBA, ENCFF501UKW, ENCFF574XYY 894279 ENCODE Processing Pipeline 78b5567468b987ec0fae5b1e9f89ea60 https://www.encodeproject.org/files/ENCFF418BIN/@@download/ENCFF418BIN.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF731INI bed narrowPeak peaks ENCSR000AKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANK DNA see document see document False 2011-02-10 ENCODE 1 ENCFF501UKW, ENCFF574XYY 991236 ENCODE Processing Pipeline 32682ce1b010ae7f8c25e62eef5ea41d https://www.encodeproject.org/files/ENCFF731INI/@@download/ENCFF731INI.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF171GKK bed narrowPeak peaks ENCSR000AKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANK DNA see document see document False 2011-02-10 ENCODE 2 ENCFF355NBA, ENCFF574XYY 1053770 ENCODE Processing Pipeline 70e571d3830aa6e2dd927f0f2b30c76e https://www.encodeproject.org/files/ENCFF171GKK/@@download/ENCFF171GKK.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF837WJR bed narrowPeak peaks ENCSR000AKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANK DNA see document see document False 2011-02-10 ENCODE 1 ENCFF392XRJ, ENCFF698ROL 970592 ENCODE Processing Pipeline a945b0cec81d4a9b328615197445b909 https://www.encodeproject.org/files/ENCFF837WJR/@@download/ENCFF837WJR.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF478WBY bed narrowPeak peaks ENCSR000AKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANK DNA see document see document False 2011-02-10 ENCODE 2 ENCFF103YPC, ENCFF392XRJ 1041281 ENCODE Processing Pipeline 15d125391b2886bd0ebc5e39d99ae987 https://www.encodeproject.org/files/ENCFF478WBY/@@download/ENCFF478WBY.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF173ULG bed narrowPeak replicated peaks ENCSR000AKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANK DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF171GKK, ENCFF418BIN, ENCFF731INI 946286 ENCODE Processing Pipeline f327b37056b539b37862ddbcb5bbb8bb https://www.encodeproject.org/files/ENCFF173ULG/@@download/ENCFF173ULG.bed.gz hg19 released low read depth, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF306MNO bed narrowPeak replicated peaks ENCSR000AKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANK DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF478WBY, ENCFF816IQF, ENCFF837WJR 969670 ENCODE Processing Pipeline 76d220e42f14353b6b2fabd65d4497ef https://www.encodeproject.org/files/ENCFF306MNO/@@download/ENCFF306MNO.bed.gz GRCh38 released low read depth, inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF140YDA bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF275STF, ENCFF522HDC 6352142 ENCODE Processing Pipeline 8b9ed27f9e33de801da5affaeec39691 https://www.encodeproject.org/files/ENCFF140YDA/@@download/ENCFF140YDA.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF721WZY bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF275STF, ENCFF468ZDX, ENCFF482NNF, ENCFF522HDC 6846560 ENCODE Processing Pipeline e66f5d29cd95a43e2d6f62e5a3bafe37 https://www.encodeproject.org/files/ENCFF721WZY/@@download/ENCFF721WZY.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF600QVD bed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF140YDA, ENCFF700BWV, ENCFF721WZY 135841 ENCODE Processing Pipeline 596ec4ba387fcc19d849fec109208b15 https://www.encodeproject.org/files/ENCFF600QVD/@@download/ENCFF600QVD.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF700BWV bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF468ZDX, ENCFF482NNF 3992676 ENCODE Processing Pipeline 9d32157d894fd70a374755130566ef07 https://www.encodeproject.org/files/ENCFF700BWV/@@download/ENCFF700BWV.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF858QMI bed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF140YDA, ENCFF700BWV, ENCFF721WZY 243606 ENCODE Processing Pipeline d4d2b801157ddbdfb7166fcf31bbfb22 https://www.encodeproject.org/files/ENCFF858QMI/@@download/ENCFF858QMI.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF168SJR bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF904CPI 3902770 ENCODE Processing Pipeline 3b4795c308d9de113ba1b9b69af16b65 https://www.encodeproject.org/files/ENCFF168SJR/@@download/ENCFF168SJR.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF845IXT bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF397ZVS 6215754 ENCODE Processing Pipeline 3480c7f0cc1a561f4a9a8dcd0483d627 https://www.encodeproject.org/files/ENCFF845IXT/@@download/ENCFF845IXT.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF565FCD bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF397ZVS, ENCFF904CPI 6718047 ENCODE Processing Pipeline 5f5e6b6f11ecd17173fef24c2bb08cfe https://www.encodeproject.org/files/ENCFF565FCD/@@download/ENCFF565FCD.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF528EDV bed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF168SJR, ENCFF419RSJ, ENCFF565FCD, ENCFF845IXT 134702 ENCODE Processing Pipeline e6cf147e42dd3a8517369d47aae30b05 https://www.encodeproject.org/files/ENCFF528EDV/@@download/ENCFF528EDV.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF996AMX bed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF168SJR, ENCFF419RSJ, ENCFF565FCD, ENCFF845IXT 246030 ENCODE Processing Pipeline 360d0e8096959f20f6c52a978ed25c87 https://www.encodeproject.org/files/ENCFF996AMX/@@download/ENCFF996AMX.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, inconsistent platforms, moderate library complexity, low read length, low read depth inconsistent mapped reads lengths, out of date analysis, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF756WGZ bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF092ACZ, ENCFF487NQY 5778675 ENCODE Processing Pipeline 2fe8e9448518ab9dfb022e968a4fd7bd https://www.encodeproject.org/files/ENCFF756WGZ/@@download/ENCFF756WGZ.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF954SDF bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF272HDX, ENCFF839YOM 6328125 ENCODE Processing Pipeline 8ad6e08b85a049cbcb940186df1541df https://www.encodeproject.org/files/ENCFF954SDF/@@download/ENCFF954SDF.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF576WZY bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF092ACZ, ENCFF272HDX, ENCFF487NQY, ENCFF839YOM 6959286 ENCODE Processing Pipeline 6ca64bf044354a89ebebfc8755846157 https://www.encodeproject.org/files/ENCFF576WZY/@@download/ENCFF576WZY.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF012VEN bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF179DZP 5575038 ENCODE Processing Pipeline a0da133bb02c909a59365e9c0fb5b1c6 https://www.encodeproject.org/files/ENCFF012VEN/@@download/ENCFF012VEN.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF616ZNS bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF022IWG 6154120 ENCODE Processing Pipeline 401c8e3130f974f39b62190bbd35b252 https://www.encodeproject.org/files/ENCFF616ZNS/@@download/ENCFF616ZNS.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF749TXQ bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF022IWG, ENCFF179DZP 6839954 ENCODE Processing Pipeline 440dd0736e75bd9626047af766d381a7 https://www.encodeproject.org/files/ENCFF749TXQ/@@download/ENCFF749TXQ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF423GUZ bed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF012VEN, ENCFF419RSJ, ENCFF616ZNS, ENCFF749TXQ 194393 ENCODE Processing Pipeline 2d026b202d227201c41b84d65b209702 https://www.encodeproject.org/files/ENCFF423GUZ/@@download/ENCFF423GUZ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF272LLG bed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF012VEN, ENCFF419RSJ, ENCFF616ZNS, ENCFF749TXQ 262233 ENCODE Processing Pipeline ef8ff622f37beebd0ba43150fe879b82 https://www.encodeproject.org/files/ENCFF272LLG/@@download/ENCFF272LLG.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF833VYQ bed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF576WZY, ENCFF756WGZ, ENCFF954SDF 238886 ENCODE Processing Pipeline a90923414b86e39ae438b8e65f6d0a43 https://www.encodeproject.org/files/ENCFF833VYQ/@@download/ENCFF833VYQ.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF588ZOO bed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF576WZY, ENCFF756WGZ, ENCFF954SDF 179992 ENCODE Processing Pipeline 32fb6c9ec0a02ed7aaf3f06835e9e36b https://www.encodeproject.org/files/ENCFF588ZOO/@@download/ENCFF588ZOO.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF206HKM bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF649ORS 5669748 ENCODE Processing Pipeline aefa36ddf6a836ac8d1144605c15aeb9 https://www.encodeproject.org/files/ENCFF206HKM/@@download/ENCFF206HKM.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF411LUB bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF434YXL 5926498 ENCODE Processing Pipeline 1dea257ccdec471727324e2118eaa620 https://www.encodeproject.org/files/ENCFF411LUB/@@download/ENCFF411LUB.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF820LPI bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF434YXL, ENCFF649ORS 6651178 ENCODE Processing Pipeline 9116989795d89e8d0b07a3c1431a7695 https://www.encodeproject.org/files/ENCFF820LPI/@@download/ENCFF820LPI.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF720FJY bed narrowPeak optimal idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF206HKM, ENCFF411LUB, ENCFF419RSJ, ENCFF820LPI 118476 ENCODE Processing Pipeline 3baec9b447c1c7946e00c8d364b23f1b https://www.encodeproject.org/files/ENCFF720FJY/@@download/ENCFF720FJY.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF552LKV bed narrowPeak conservative idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF206HKM, ENCFF411LUB, ENCFF419RSJ, ENCFF820LPI 85250 ENCODE Processing Pipeline 4b847859787531dde3d7c1d26933d608 https://www.encodeproject.org/files/ENCFF552LKV/@@download/ENCFF552LKV.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF430YKE bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF004VBD, ENCFF180VYU 5900331 ENCODE Processing Pipeline 38b2cefa01a1fb8d6ce8bf47823a3bd7 https://www.encodeproject.org/files/ENCFF430YKE/@@download/ENCFF430YKE.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF021CLN bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF004VBD, ENCFF137WND 5666894 ENCODE Processing Pipeline 27517a3099699e324514f9bce53e8422 https://www.encodeproject.org/files/ENCFF021CLN/@@download/ENCFF021CLN.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF311BXD bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF004VBD, ENCFF137WND, ENCFF180VYU 6647245 ENCODE Processing Pipeline 395339ff0cb584e4cd350ac595f928b6 https://www.encodeproject.org/files/ENCFF311BXD/@@download/ENCFF311BXD.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF421VCV bed narrowPeak optimal idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF021CLN, ENCFF311BXD, ENCFF430YKE 119381 ENCODE Processing Pipeline 8e82d2a59d192105c2a8862db60b61c7 https://www.encodeproject.org/files/ENCFF421VCV/@@download/ENCFF421VCV.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF876JRX bed narrowPeak conservative idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF021CLN, ENCFF311BXD, ENCFF430YKE 85480 ENCODE Processing Pipeline 3cca22439d969eec1c21485e3815e2e7 https://www.encodeproject.org/files/ENCFF876JRX/@@download/ENCFF876JRX.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF501PAH bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF498KCA 6086835 ENCODE Processing Pipeline 48d3320887430fa40ae61106359f7d60 https://www.encodeproject.org/files/ENCFF501PAH/@@download/ENCFF501PAH.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF464CGY bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400SKV, ENCFF498KCA 7038578 ENCODE Processing Pipeline e3c3e79c0e54a9e76053c4c58f9dcca5 https://www.encodeproject.org/files/ENCFF464CGY/@@download/ENCFF464CGY.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF650BPF bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF400SKV 6157446 ENCODE Processing Pipeline df51471479399d35f908de94fe5a4611 https://www.encodeproject.org/files/ENCFF650BPF/@@download/ENCFF650BPF.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF736AVY bed narrowPeak conservative idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF464CGY, ENCFF501PAH, ENCFF650BPF 74131 ENCODE Processing Pipeline 6cc474df468741aaf7591d366036aff6 https://www.encodeproject.org/files/ENCFF736AVY/@@download/ENCFF736AVY.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF229BQZ bed narrowPeak optimal idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF464CGY, ENCFF501PAH, ENCFF650BPF 97136 ENCODE Processing Pipeline 6ad779af2eef6ffe8b0bc3aae3197028 https://www.encodeproject.org/files/ENCFF229BQZ/@@download/ENCFF229BQZ.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF355KNJ bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF024MPE, ENCFF304EUO 6157206 ENCODE Processing Pipeline dd2a0ea9d56a21d71096278aa6ef3506 https://www.encodeproject.org/files/ENCFF355KNJ/@@download/ENCFF355KNJ.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF357IPW bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF304EUO, ENCFF866OLR 6081540 ENCODE Processing Pipeline 9ff6ea0815cc9537fdb85397e1843422 https://www.encodeproject.org/files/ENCFF357IPW/@@download/ENCFF357IPW.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF488ZUO bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF024MPE, ENCFF304EUO, ENCFF866OLR 7028784 ENCODE Processing Pipeline 232c2f36af89f4cbd6083828588994ca https://www.encodeproject.org/files/ENCFF488ZUO/@@download/ENCFF488ZUO.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF403EOA bed narrowPeak conservative idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF355KNJ, ENCFF357IPW, ENCFF488ZUO 72715 ENCODE Processing Pipeline 64b1427667f0ece7692715b330338dd7 https://www.encodeproject.org/files/ENCFF403EOA/@@download/ENCFF403EOA.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF007DKB bed narrowPeak optimal idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF355KNJ, ENCFF357IPW, ENCFF488ZUO 97313 ENCODE Processing Pipeline e43f9679c5db6d500d389acadd52871e https://www.encodeproject.org/files/ENCFF007DKB/@@download/ENCFF007DKB.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF373FDW bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF354IGM, ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 6696113 ENCODE Processing Pipeline 255615d0001ae16e53d98f85676ca8cc https://www.encodeproject.org/files/ENCFF373FDW/@@download/ENCFF373FDW.bed.gz hg19 released antibody characterized with exemption ENCFF844HBQ bed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF001TDO, ENCFF077SAE, ENCFF373FDW, ENCFF939WYL 312304 ENCODE Processing Pipeline b304df9dcf031ea1956760833ad45da5 https://www.encodeproject.org/files/ENCFF844HBQ/@@download/ENCFF844HBQ.bed.gz hg19 released antibody characterized with exemption ENCFF077SAE bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 6051932 ENCODE Processing Pipeline dede322ac318214dd1b720b562e528c6 https://www.encodeproject.org/files/ENCFF077SAE/@@download/ENCFF077SAE.bed.gz hg19 released antibody characterized with exemption ENCFF939WYL bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF354IGM, ENCFF444TNY, ENCFF847YDJ 6086390 ENCODE Processing Pipeline d487c96986116ccb87b786d9ddfd69c7 https://www.encodeproject.org/files/ENCFF939WYL/@@download/ENCFF939WYL.bed.gz hg19 released antibody characterized with exemption ENCFF063BGI bed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF001TDO, ENCFF077SAE, ENCFF373FDW, ENCFF939WYL 279830 ENCODE Processing Pipeline 05c50ae41a8b131604292e1cbca9838d https://www.encodeproject.org/files/ENCFF063BGI/@@download/ENCFF063BGI.bed.gz hg19 released antibody characterized with exemption ENCFF298RGN bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF408TSG, ENCFF749LRJ 6551750 ENCODE Processing Pipeline 59b5c167384b9b8df5ffd6ca20a2e722 https://www.encodeproject.org/files/ENCFF298RGN/@@download/ENCFF298RGN.bed.gz GRCh38 released antibody characterized with exemption ENCFF576FKD bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF408TSG 5898968 ENCODE Processing Pipeline 12f62e333fe9f0f6f20cfe7c040ac0c7 https://www.encodeproject.org/files/ENCFF576FKD/@@download/ENCFF576FKD.bed.gz GRCh38 released antibody characterized with exemption ENCFF379LKE bed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF298RGN, ENCFF419RSJ, ENCFF576FKD, ENCFF601FGL 310263 ENCODE Processing Pipeline 933a765031fc18c258b3ed9ebf3c4866 https://www.encodeproject.org/files/ENCFF379LKE/@@download/ENCFF379LKE.bed.gz GRCh38 released antibody characterized with exemption ENCFF601FGL bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF749LRJ 5961921 ENCODE Processing Pipeline f31122c313780f824795c80a6e5304b9 https://www.encodeproject.org/files/ENCFF601FGL/@@download/ENCFF601FGL.bed.gz GRCh38 released antibody characterized with exemption ENCFF512PBA bed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF298RGN, ENCFF419RSJ, ENCFF576FKD, ENCFF601FGL 283889 ENCODE Processing Pipeline 07a616f9dbdfaa1d5c7a2f9886e2b00f https://www.encodeproject.org/files/ENCFF512PBA/@@download/ENCFF512PBA.bed.gz GRCh38 released antibody characterized with exemption ENCFF658SVX bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF203ABU, ENCFF705ZEH 5319820 ENCODE Processing Pipeline 27097323d9c4e72c0cfc64ffabfee66d https://www.encodeproject.org/files/ENCFF658SVX/@@download/ENCFF658SVX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF948OFI bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF222PVF, ENCFF477SGV 5295909 ENCODE Processing Pipeline edab1ed4566b4314cc23b829e56f8d33 https://www.encodeproject.org/files/ENCFF948OFI/@@download/ENCFF948OFI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF473NOQ bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF203ABU, ENCFF222PVF, ENCFF477SGV, ENCFF705ZEH 6716591 ENCODE Processing Pipeline 48a613334fcd7390397d1898e33b8ca9 https://www.encodeproject.org/files/ENCFF473NOQ/@@download/ENCFF473NOQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF730URE bed narrowPeak optimal idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF473NOQ, ENCFF658SVX, ENCFF948OFI 82082 ENCODE Processing Pipeline 6da5084fceeea43dc8aba95ea3187c52 https://www.encodeproject.org/files/ENCFF730URE/@@download/ENCFF730URE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF342ZVG bed narrowPeak conservative idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF473NOQ, ENCFF658SVX, ENCFF948OFI 72695 ENCODE Processing Pipeline cbb92343d0de0b3cc29604b57c81f083 https://www.encodeproject.org/files/ENCFF342ZVG/@@download/ENCFF342ZVG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF761ITN bed narrowPeak conservative idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF251STL, ENCFF413JEY, ENCFF419RSJ, ENCFF763NYG 72551 ENCODE Processing Pipeline acd0a0a3faa69345e2e3a8597e3c06a5 https://www.encodeproject.org/files/ENCFF761ITN/@@download/ENCFF761ITN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF482DRO bed narrowPeak optimal idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF251STL, ENCFF413JEY, ENCFF419RSJ, ENCFF763NYG 82992 ENCODE Processing Pipeline d26d99b4850455d67a350c8833578aa1 https://www.encodeproject.org/files/ENCFF482DRO/@@download/ENCFF482DRO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF763NYG bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF010TVY, ENCFF308PSW 5113711 ENCODE Processing Pipeline 8c12d6b7557d89bfab48c73b290b930d https://www.encodeproject.org/files/ENCFF763NYG/@@download/ENCFF763NYG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF251STL bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF057SMG, ENCFF198JCQ 5249963 ENCODE Processing Pipeline a75437180a3da7d5761960149bcf1b18 https://www.encodeproject.org/files/ENCFF251STL/@@download/ENCFF251STL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF413JEY bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010TVY, ENCFF057SMG, ENCFF198JCQ, ENCFF308PSW 6602926 ENCODE Processing Pipeline 2ea60528636839ef52131baac4b57ad2 https://www.encodeproject.org/files/ENCFF413JEY/@@download/ENCFF413JEY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF557SFL bed narrowPeak conservative idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF299RHL, ENCFF419RSJ, ENCFF694KSM, ENCFF935HPA 612630 ENCODE Processing Pipeline 6377fbfb5a1139a8f040542e92fca5e3 https://www.encodeproject.org/files/ENCFF557SFL/@@download/ENCFF557SFL.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF525MPI bed narrowPeak optimal idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF299RHL, ENCFF419RSJ, ENCFF694KSM, ENCFF935HPA 616163 ENCODE Processing Pipeline 771e3875b5bd6a6f256953a6fad4660a https://www.encodeproject.org/files/ENCFF525MPI/@@download/ENCFF525MPI.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF299RHL bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF330XAC 7262176 ENCODE Processing Pipeline ac489291e1e4ef9a908078a1dd1817f6 https://www.encodeproject.org/files/ENCFF299RHL/@@download/ENCFF299RHL.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF694KSM bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF066JMV 7206316 ENCODE Processing Pipeline f330c0cc918766b8bd4d09d10cf83663 https://www.encodeproject.org/files/ENCFF694KSM/@@download/ENCFF694KSM.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF935HPA bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF066JMV, ENCFF330XAC 7310470 ENCODE Processing Pipeline 6cbcb5d2ee060f8423e597be99a5e148 https://www.encodeproject.org/files/ENCFF935HPA/@@download/ENCFF935HPA.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF189YFO bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF207ILO, ENCFF834TUP 7142686 ENCODE Processing Pipeline 5fba234db01600332db1a33dc36a687d https://www.encodeproject.org/files/ENCFF189YFO/@@download/ENCFF189YFO.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF230QTS bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF981ZOJ 7251235 ENCODE Processing Pipeline ac03467c13d09b0c060ac98caf91fb99 https://www.encodeproject.org/files/ENCFF230QTS/@@download/ENCFF230QTS.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF207RUE bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF160VXC, ENCFF207ILO, ENCFF834TUP, ENCFF981ZOJ 7309769 ENCODE Processing Pipeline 98bfaf46f1594d56e6b8d44ada364991 https://www.encodeproject.org/files/ENCFF207RUE/@@download/ENCFF207RUE.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF670ZCR bed narrowPeak optimal idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF189YFO, ENCFF207RUE, ENCFF230QTS 626753 ENCODE Processing Pipeline 3572fd53982de4f442b944272468c615 https://www.encodeproject.org/files/ENCFF670ZCR/@@download/ENCFF670ZCR.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF582HCK bed narrowPeak conservative idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF189YFO, ENCFF207RUE, ENCFF230QTS 612927 ENCODE Processing Pipeline e7f77bd3f6e2275f94b8e6e7d1c54a62 https://www.encodeproject.org/files/ENCFF582HCK/@@download/ENCFF582HCK.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF634SVO bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF262CJE, ENCFF506DFV, ENCFF637PNR 6429786 ENCODE Processing Pipeline e0d3f9a83e1cb435065912e0a3b08a02 https://www.encodeproject.org/files/ENCFF634SVO/@@download/ENCFF634SVO.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF197MJO bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF262CJE, ENCFF506DFV, ENCFF594JBQ 5923774 ENCODE Processing Pipeline 121bb1bdc84e093168dc663ffbb01560 https://www.encodeproject.org/files/ENCFF197MJO/@@download/ENCFF197MJO.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF400NKF bed narrowPeak conservative idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF001TDO, ENCFF197MJO, ENCFF634SVO, ENCFF801LNJ 395202 ENCODE Processing Pipeline ab7de6bb6896665b52f6e4f3189cfb79 https://www.encodeproject.org/files/ENCFF400NKF/@@download/ENCFF400NKF.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF975IRM bed narrowPeak optimal idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF001TDO, ENCFF197MJO, ENCFF634SVO, ENCFF801LNJ 469880 ENCODE Processing Pipeline 36677304d38b5f80815daf0f71286681 https://www.encodeproject.org/files/ENCFF975IRM/@@download/ENCFF975IRM.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF328QZM bed narrowPeak optimal idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF036GCO, ENCFF115DWC, ENCFF419RSJ, ENCFF651LFT 472665 ENCODE Processing Pipeline a03eb83debb7f343eca8e52bf576135f https://www.encodeproject.org/files/ENCFF328QZM/@@download/ENCFF328QZM.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF801LNJ bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF262CJE, ENCFF506DFV, ENCFF594JBQ, ENCFF637PNR 7009580 ENCODE Processing Pipeline b57ed07d810b8a2fde28215fecfdd12b https://www.encodeproject.org/files/ENCFF801LNJ/@@download/ENCFF801LNJ.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF036GCO bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF706XFF 5929424 ENCODE Processing Pipeline 58be04e03165c4566bde3eea49f1d475 https://www.encodeproject.org/files/ENCFF036GCO/@@download/ENCFF036GCO.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF651LFT bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF459MNI 6432840 ENCODE Processing Pipeline a651a82f989ca268b25ebbb200137b0f https://www.encodeproject.org/files/ENCFF651LFT/@@download/ENCFF651LFT.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF115DWC bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF459MNI, ENCFF706XFF 7015551 ENCODE Processing Pipeline 9a28e354d7e74c16028201b4f9c6f099 https://www.encodeproject.org/files/ENCFF115DWC/@@download/ENCFF115DWC.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF124NBN bed narrowPeak conservative idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF036GCO, ENCFF115DWC, ENCFF419RSJ, ENCFF651LFT 395542 ENCODE Processing Pipeline 342c028380b0ae5e674af8f89e26a152 https://www.encodeproject.org/files/ENCFF124NBN/@@download/ENCFF124NBN.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF470QLV bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF938LDN 6177835 ENCODE Processing Pipeline 9736c4051e5dd11f89ca06ed8d8caf4f https://www.encodeproject.org/files/ENCFF470QLV/@@download/ENCFF470QLV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF309FGP bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF425VIX, ENCFF572OMD 6445090 ENCODE Processing Pipeline 644311b48adc7dac81b450b4c99dcd2a https://www.encodeproject.org/files/ENCFF309FGP/@@download/ENCFF309FGP.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF590JZV bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF425VIX, ENCFF508DBG, ENCFF572OMD, ENCFF938LDN 6884691 ENCODE Processing Pipeline abfba4d54cd4c4594f984e6b7e6faa60 https://www.encodeproject.org/files/ENCFF590JZV/@@download/ENCFF590JZV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF120IDE bed narrowPeak optimal idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF309FGP, ENCFF470QLV, ENCFF590JZV 998359 ENCODE Processing Pipeline 4362859aa12a3ba4328a7931a50d40a3 https://www.encodeproject.org/files/ENCFF120IDE/@@download/ENCFF120IDE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF140GXH bed narrowPeak conservative idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF309FGP, ENCFF470QLV, ENCFF590JZV 965464 ENCODE Processing Pipeline 82ae211d0d3c247200976490a490027a https://www.encodeproject.org/files/ENCFF140GXH/@@download/ENCFF140GXH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF294HYU bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF161VHM, ENCFF721LZU 6172518 ENCODE Processing Pipeline bc5ae1fb5a55e00078598f6e4d790e9e https://www.encodeproject.org/files/ENCFF294HYU/@@download/ENCFF294HYU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF834PRZ bed narrowPeak conservative idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF102HGA, ENCFF294HYU, ENCFF314GFC, ENCFF419RSJ 971020 ENCODE Processing Pipeline 5eb30b5a4c1736d1a07a9d3d7415f6f5 https://www.encodeproject.org/files/ENCFF834PRZ/@@download/ENCFF834PRZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF102HGA bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF156OFZ, ENCFF161VHM, ENCFF721LZU 7008952 ENCODE Processing Pipeline 930e93467373cc9939e425924319e43c https://www.encodeproject.org/files/ENCFF102HGA/@@download/ENCFF102HGA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF232ASB bed narrowPeak optimal idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF102HGA, ENCFF294HYU, ENCFF314GFC, ENCFF419RSJ 1008580 ENCODE Processing Pipeline 6fb75ec10500be4f9a09c1ff700835b7 https://www.encodeproject.org/files/ENCFF232ASB/@@download/ENCFF232ASB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF314GFC bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF156OFZ 6433897 ENCODE Processing Pipeline 61b8884f72c94af212cc5f4b25c81422 https://www.encodeproject.org/files/ENCFF314GFC/@@download/ENCFF314GFC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO ENCFF002CMV bed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 364508 ENCODE Consortium Analysis Working Group ed11b14aaf5f989b08e1da0a481d73cf https://www.encodeproject.org/files/ENCFF002CMV/@@download/ENCFF002CMV.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF419ANM bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF587WWS, ENCFF772PJM 4055553 ENCODE Processing Pipeline bb48a448fb4f0cd6efb94258dc838c9e https://www.encodeproject.org/files/ENCFF419ANM/@@download/ENCFF419ANM.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF225JGM bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587WWS, ENCFF772PJM, ENCFF794ABP 2618829 ENCODE Processing Pipeline 5bf1a09c6f0de305f7f65098c9df1f4d https://www.encodeproject.org/files/ENCFF225JGM/@@download/ENCFF225JGM.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF857POG bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF794ABP 1523381 ENCODE Processing Pipeline 44b833e6e54dd885d4d2e1197854c926 https://www.encodeproject.org/files/ENCFF857POG/@@download/ENCFF857POG.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF409EYL bed narrowPeak conservative idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225JGM, ENCFF419ANM, ENCFF419RSJ, ENCFF857POG 227872 ENCODE Processing Pipeline 93784a6db50bee1592770335f530509e https://www.encodeproject.org/files/ENCFF409EYL/@@download/ENCFF409EYL.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF717KGR bed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225JGM, ENCFF419ANM, ENCFF419RSJ, ENCFF857POG 344249 ENCODE Processing Pipeline 265cbc2d514f989af73979fec5570bb3 https://www.encodeproject.org/files/ENCFF717KGR/@@download/ENCFF717KGR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF360GCE bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF642OQJ, ENCFF831FLE 6900000 ENCODE Processing Pipeline 17198703d90150d4dc8dd66cdc74f495 https://www.encodeproject.org/files/ENCFF360GCE/@@download/ENCFF360GCE.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF118EXB bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF831FLE, ENCFF938KSJ 6685960 ENCODE Processing Pipeline 80b3bb1da20547a692d75886b0ce8f51 https://www.encodeproject.org/files/ENCFF118EXB/@@download/ENCFF118EXB.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF321FDW bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF642OQJ, ENCFF831FLE, ENCFF938KSJ 7157256 ENCODE Processing Pipeline f409e3573e9634709e8bc3a394e46f13 https://www.encodeproject.org/files/ENCFF321FDW/@@download/ENCFF321FDW.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF999QIF bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF967YTY, ENCFF980YNA 6536463 ENCODE Processing Pipeline 4b14944dc1e84d9470f143200eb803c7 https://www.encodeproject.org/files/ENCFF999QIF/@@download/ENCFF999QIF.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF998EXR bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF564FBJ, ENCFF967YTY 6737883 ENCODE Processing Pipeline 62d54a894a5bf98f85504ae4e798dad5 https://www.encodeproject.org/files/ENCFF998EXR/@@download/ENCFF998EXR.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF899QEM bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF564FBJ, ENCFF967YTY, ENCFF980YNA 7067249 ENCODE Processing Pipeline 7668d8140d47eba717f0225731632a00 https://www.encodeproject.org/files/ENCFF899QEM/@@download/ENCFF899QEM.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF468VJV bed narrowPeak optimal idr thresholded peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF899QEM, ENCFF998EXR, ENCFF999QIF 357604 ENCODE Processing Pipeline 25e42b68b18ed0ff950932ea3644dab0 https://www.encodeproject.org/files/ENCFF468VJV/@@download/ENCFF468VJV.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF356ASJ bed narrowPeak optimal idr thresholded peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF118EXB, ENCFF321FDW, ENCFF360GCE 299967 ENCODE Processing Pipeline 85a7606ad879c0327dc0b15b3eec8947 https://www.encodeproject.org/files/ENCFF356ASJ/@@download/ENCFF356ASJ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF001VPJ bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 76019 Peggy Farnham, USC ef2a46485852ced4e03750fda5db807e https://www.encodeproject.org/files/ENCFF001VPJ/@@download/ENCFF001VPJ.bed.gz hg19 archived borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYQ bed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 104777 ENCODE Consortium Analysis Working Group 940cef4ff84d4b47a11d8fd9e57f53ca https://www.encodeproject.org/files/ENCFF002CYQ/@@download/ENCFF002CYQ.bed.gz hg19 archived borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF798NNI bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF633CMO 1647800 ENCODE Processing Pipeline 67907a147a81318ec5289b2a9c391116 https://www.encodeproject.org/files/ENCFF798NNI/@@download/ENCFF798NNI.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF329XCJ bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF139WUV, ENCFF633CMO 4680067 ENCODE Processing Pipeline e200ffa5f59600afae960e5334703e5a https://www.encodeproject.org/files/ENCFF329XCJ/@@download/ENCFF329XCJ.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF632ZHY bed narrowPeak conservative idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256EZU, ENCFF329XCJ, ENCFF419RSJ, ENCFF798NNI 75768 ENCODE Processing Pipeline 46f3963e5765570315a72682c2f16aaf https://www.encodeproject.org/files/ENCFF632ZHY/@@download/ENCFF632ZHY.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF256EZU bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF139WUV 3120021 ENCODE Processing Pipeline 5ecf6d529f6490697598a450dd91da03 https://www.encodeproject.org/files/ENCFF256EZU/@@download/ENCFF256EZU.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF635XCI bed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256EZU, ENCFF329XCJ, ENCFF419RSJ, ENCFF798NNI 93625 ENCODE Processing Pipeline 4545455201e3285ee2249fc874722330 https://www.encodeproject.org/files/ENCFF635XCI/@@download/ENCFF635XCI.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF211PND bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF566NKP 3133805 ENCODE Processing Pipeline 7b3c014da2fb8c5e41950d2bd25f182f https://www.encodeproject.org/files/ENCFF211PND/@@download/ENCFF211PND.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF557DSM bed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF211PND, ENCFF228AYO, ENCFF899XEM 93049 ENCODE Processing Pipeline cf8ffec94a9b83f40812443c565a6a17 https://www.encodeproject.org/files/ENCFF557DSM/@@download/ENCFF557DSM.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF899XEM bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF193QAR 1723059 ENCODE Processing Pipeline 682a1f74ecb0c3f653a3f0f457a3fdb1 https://www.encodeproject.org/files/ENCFF899XEM/@@download/ENCFF899XEM.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF228AYO bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF193QAR, ENCFF566NKP 4710456 ENCODE Processing Pipeline c5548561077713c5247041e54aeb05b0 https://www.encodeproject.org/files/ENCFF228AYO/@@download/ENCFF228AYO.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF291MOZ bed narrowPeak conservative idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF211PND, ENCFF228AYO, ENCFF899XEM 78222 ENCODE Processing Pipeline 0b12a9c311566321b659238e5df6c40b https://www.encodeproject.org/files/ENCFF291MOZ/@@download/ENCFF291MOZ.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF062GBH bed narrowPeak peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 1 ENCFF581ZBQ, ENCFF839YOM 5770083 ENCODE Processing Pipeline 2c1688238cd29a72284cc6ab236ad153 https://www.encodeproject.org/files/ENCFF062GBH/@@download/ENCFF062GBH.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched status antibody not characterized to standard ENCFF416NKY bed narrowPeak peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092ACZ, ENCFF513DAL 5948354 ENCODE Processing Pipeline 2b9dcb1a267a749da3ce4105c2e6bd61 https://www.encodeproject.org/files/ENCFF416NKY/@@download/ENCFF416NKY.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments antibody not characterized to standard ENCFF285BON bed narrowPeak peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF092ACZ, ENCFF513DAL, ENCFF581ZBQ, ENCFF839YOM 6989572 ENCODE Processing Pipeline ea759be757064fa086832c17b6398d01 https://www.encodeproject.org/files/ENCFF285BON/@@download/ENCFF285BON.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched status antibody not characterized to standard ENCFF549XOW bed narrowPeak peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 1 ENCFF684CFB 5519987 ENCODE Processing Pipeline 63c9fb6a6471893ce462f0c6cc41dafa https://www.encodeproject.org/files/ENCFF549XOW/@@download/ENCFF549XOW.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments antibody not characterized to standard ENCFF999GJZ bed narrowPeak peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 2 ENCFF780GMX 5751661 ENCODE Processing Pipeline 1b6668deefd60c780d5a2c5477770da0 https://www.encodeproject.org/files/ENCFF999GJZ/@@download/ENCFF999GJZ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments antibody not characterized to standard ENCFF885DOF bed narrowPeak peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF684CFB, ENCFF780GMX 6837780 ENCODE Processing Pipeline 741fdbd00d82e6f05b6cf7049b72b660 https://www.encodeproject.org/files/ENCFF885DOF/@@download/ENCFF885DOF.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments antibody not characterized to standard ENCFF513GIW bed narrowPeak conservative idr thresholded peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF549XOW, ENCFF885DOF, ENCFF999GJZ 88722 ENCODE Processing Pipeline ceec320bcf7513927e54250988012ba5 https://www.encodeproject.org/files/ENCFF513GIW/@@download/ENCFF513GIW.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments antibody not characterized to standard ENCFF600MGE bed narrowPeak optimal idr thresholded peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF549XOW, ENCFF885DOF, ENCFF999GJZ 100509 ENCODE Processing Pipeline dec20803f21eb434dd991ef38f9e6b1e https://www.encodeproject.org/files/ENCFF600MGE/@@download/ENCFF600MGE.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments antibody not characterized to standard ENCFF501PDU bed narrowPeak conservative idr thresholded peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF062GBH, ENCFF285BON, ENCFF416NKY 73386 ENCODE Processing Pipeline 1f303697bc915cab7e6f32376a479edb https://www.encodeproject.org/files/ENCFF501PDU/@@download/ENCFF501PDU.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments antibody not characterized to standard ENCFF560NIM bed narrowPeak optimal idr thresholded peaks ENCSR224IKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TFDP1-human ENCAB000AUI DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF062GBH, ENCFF285BON, ENCFF416NKY 87627 ENCODE Processing Pipeline ab31fcc80bd9d091f43376205abad171 https://www.encodeproject.org/files/ENCFF560NIM/@@download/ENCFF560NIM.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments antibody not characterized to standard ENCFF406QTB bed narrowPeak peaks ENCSR000AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000BLJ DNA see document see document False 2011-02-10 ENCODE 1 ENCFF574XYY, ENCFF681JQI 1020343 ENCODE Processing Pipeline 9f116ca14ab520ceba080e4270eaa254 https://www.encodeproject.org/files/ENCFF406QTB/@@download/ENCFF406QTB.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, low read depth insufficient read depth ENCFF314GKM bed narrowPeak peaks ENCSR000AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000BLJ DNA see document see document False 2011-02-10 ENCODE 2 ENCFF574XYY, ENCFF804NBY 1230522 ENCODE Processing Pipeline 25836a7ca29cfebc94b3e3a36c0f3495 https://www.encodeproject.org/files/ENCFF314GKM/@@download/ENCFF314GKM.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, low read depth insufficient read depth ENCFF507QPR bed narrowPeak peaks ENCSR000AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000BLJ DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF574XYY, ENCFF681JQI, ENCFF804NBY 1040878 ENCODE Processing Pipeline f16a9cbb8e3a38308c2b46343f491f64 https://www.encodeproject.org/files/ENCFF507QPR/@@download/ENCFF507QPR.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, low read depth insufficient read depth ENCFF127XXD bed narrowPeak replicated peaks ENCSR000AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000BLJ DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF314GKM, ENCFF406QTB, ENCFF507QPR 1096295 ENCODE Processing Pipeline c0e7d436d8ae49332abff40406b9ab8b https://www.encodeproject.org/files/ENCFF127XXD/@@download/ENCFF127XXD.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, low read depth insufficient read depth ENCFF860DEC bed narrowPeak peaks ENCSR000AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000BLJ DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF777LZD 1219457 ENCODE Processing Pipeline c7fb9ee2745a2788ecb13628269a2bd7 https://www.encodeproject.org/files/ENCFF860DEC/@@download/ENCFF860DEC.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth insufficient read depth ENCFF500EUY bed narrowPeak peaks ENCSR000AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000BLJ DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF392XRJ, ENCFF633WWH, ENCFF777LZD 1016386 ENCODE Processing Pipeline f3723deb38c24412a973d7913b186faf https://www.encodeproject.org/files/ENCFF500EUY/@@download/ENCFF500EUY.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth insufficient read depth ENCFF251TOG bed narrowPeak peaks ENCSR000AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000BLJ DNA see document see document False 2011-02-10 ENCODE 1 ENCFF392XRJ, ENCFF633WWH 1021012 ENCODE Processing Pipeline 2fb1b8c49633551898647e15836434df https://www.encodeproject.org/files/ENCFF251TOG/@@download/ENCFF251TOG.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth insufficient read depth ENCFF909PMV bed narrowPeak replicated peaks ENCSR000AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB000BLJ DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF251TOG, ENCFF500EUY, ENCFF860DEC 1069763 ENCODE Processing Pipeline c0a6138d8099c866c3509ff11e30f369 https://www.encodeproject.org/files/ENCFF909PMV/@@download/ENCFF909PMV.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth insufficient read depth ENCFF369YHE bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF180DLN, ENCFF311MHB 5606389 ENCODE Processing Pipeline d8cddbe81473e58340ce677c25e38cc5 https://www.encodeproject.org/files/ENCFF369YHE/@@download/ENCFF369YHE.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF089QJI bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF180DLN, ENCFF290VXO 5435601 ENCODE Processing Pipeline 1b3771a11fba80bd23684e282119d03b https://www.encodeproject.org/files/ENCFF089QJI/@@download/ENCFF089QJI.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF922IFQ bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF180DLN, ENCFF290VXO, ENCFF311MHB 6399513 ENCODE Processing Pipeline 05e91842f81f7d1926814e2fdd3f27de https://www.encodeproject.org/files/ENCFF922IFQ/@@download/ENCFF922IFQ.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF182JFB bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF448SJG, ENCFF596JNR 5252380 ENCODE Processing Pipeline f84be3398bf1e178da40f78b82a94102 https://www.encodeproject.org/files/ENCFF182JFB/@@download/ENCFF182JFB.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF602MFR bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF596JNR, ENCFF786KLU 5422295 ENCODE Processing Pipeline 1d256864c303da65abf4ffda27502b59 https://www.encodeproject.org/files/ENCFF602MFR/@@download/ENCFF602MFR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF310BUW bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF448SJG, ENCFF596JNR, ENCFF786KLU 6289663 ENCODE Processing Pipeline 2222ab14bd61560b581b7ee4abfabdc4 https://www.encodeproject.org/files/ENCFF310BUW/@@download/ENCFF310BUW.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF558VAL bed narrowPeak optimal idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF182JFB, ENCFF310BUW, ENCFF419RSJ, ENCFF602MFR 157997 ENCODE Processing Pipeline e16bf2d6312c6ab45aae1c7e5f8ea231 https://www.encodeproject.org/files/ENCFF558VAL/@@download/ENCFF558VAL.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF088EKR bed narrowPeak conservative idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF182JFB, ENCFF310BUW, ENCFF419RSJ, ENCFF602MFR 122590 ENCODE Processing Pipeline ab19c6d32b36f58c887894e72e87ca3b https://www.encodeproject.org/files/ENCFF088EKR/@@download/ENCFF088EKR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF265LKN bed narrowPeak optimal idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF089QJI, ENCFF369YHE, ENCFF922IFQ 128527 ENCODE Processing Pipeline 38e7c9a347317a014c942a4fb187d1c6 https://www.encodeproject.org/files/ENCFF265LKN/@@download/ENCFF265LKN.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF413OIG bed narrowPeak conservative idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF089QJI, ENCFF369YHE, ENCFF922IFQ 101256 ENCODE Processing Pipeline 12e85fe44ebdf827e3c7d618feee2aaf https://www.encodeproject.org/files/ENCFF413OIG/@@download/ENCFF413OIG.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF002CLZ bed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 290707 ENCODE Consortium Analysis Working Group e81f2714fb61f80af419bc5e45682868 https://www.encodeproject.org/files/ENCFF002CLZ/@@download/ENCFF002CLZ.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF781AWX bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF603XOJ, ENCFF902IUF 4583450 ENCODE Processing Pipeline 2b4e0cbe56a01e79132a5d60ffa468fd https://www.encodeproject.org/files/ENCFF781AWX/@@download/ENCFF781AWX.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF124HAC bed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF210BNW, ENCFF419RSJ, ENCFF507LZF, ENCFF781AWX 261370 ENCODE Processing Pipeline 02eada5e9e0de75b0ff67b7d443fead1 https://www.encodeproject.org/files/ENCFF124HAC/@@download/ENCFF124HAC.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF507LZF bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF902IUF 2539837 ENCODE Processing Pipeline 6321a82df6d44d9c955c6489ac010538 https://www.encodeproject.org/files/ENCFF507LZF/@@download/ENCFF507LZF.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF210BNW bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF603XOJ 3427898 ENCODE Processing Pipeline e6208db8813379fbb61864602f00cb73 https://www.encodeproject.org/files/ENCFF210BNW/@@download/ENCFF210BNW.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF554UPA bed narrowPeak conservative idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF210BNW, ENCFF419RSJ, ENCFF507LZF, ENCFF781AWX 192917 ENCODE Processing Pipeline 7680f41509e7f77365503fb5992ddfc0 https://www.encodeproject.org/files/ENCFF554UPA/@@download/ENCFF554UPA.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF368IHM bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF216EBS, ENCFF508DBG 5654023 ENCODE Processing Pipeline 41b2340859901069610fca97bbe1ca32 https://www.encodeproject.org/files/ENCFF368IHM/@@download/ENCFF368IHM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF059VEO bed narrowPeak conservative idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF368IHM, ENCFF700XRO, ENCFF958WJN 141741 ENCODE Processing Pipeline 4211bacd3e15f45c368f7cc3af15837e https://www.encodeproject.org/files/ENCFF059VEO/@@download/ENCFF059VEO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF700XRO bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF165COO, ENCFF216EBS, ENCFF508DBG, ENCFF572OMD 6822248 ENCODE Processing Pipeline c5f08ba342a082ecae3186d5cf41e737 https://www.encodeproject.org/files/ENCFF700XRO/@@download/ENCFF700XRO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF958WJN bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF165COO, ENCFF572OMD 5481752 ENCODE Processing Pipeline 5e55b4a47a1adfdffea227c9ea0cf556 https://www.encodeproject.org/files/ENCFF958WJN/@@download/ENCFF958WJN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF905VXX bed narrowPeak optimal idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF368IHM, ENCFF700XRO, ENCFF958WJN 148569 ENCODE Processing Pipeline dc9b0aa9306a30f02136fb2eb7c10c72 https://www.encodeproject.org/files/ENCFF905VXX/@@download/ENCFF905VXX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF546RAG bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF466OLG, ENCFF721LZU 5702685 ENCODE Processing Pipeline a00cdc891e4073c25f59d8235f94a5a2 https://www.encodeproject.org/files/ENCFF546RAG/@@download/ENCFF546RAG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF285OCH bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF466OLG, ENCFF682NGE, ENCFF721LZU 6840429 ENCODE Processing Pipeline 138bb6cb988ccd7302fed63cf0d33986 https://www.encodeproject.org/files/ENCFF285OCH/@@download/ENCFF285OCH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF809AYK bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF682NGE 5217721 ENCODE Processing Pipeline f566fb5c685dba707c8e6f0dfa094156 https://www.encodeproject.org/files/ENCFF809AYK/@@download/ENCFF809AYK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF282WIP bed narrowPeak conservative idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF285OCH, ENCFF419RSJ, ENCFF546RAG, ENCFF809AYK 152334 ENCODE Processing Pipeline 30c8ecb8f373ec17be7c6331bfd34edc https://www.encodeproject.org/files/ENCFF282WIP/@@download/ENCFF282WIP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF448YOS bed narrowPeak optimal idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF285OCH, ENCFF419RSJ, ENCFF546RAG, ENCFF809AYK 161538 ENCODE Processing Pipeline c29e833c1cf56dbb7b813161c87dbcd6 https://www.encodeproject.org/files/ENCFF448YOS/@@download/ENCFF448YOS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO ENCFF002CMQ bed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 221518 ENCODE Consortium Analysis Working Group 3e5196912f2efefafdfbb24469bf2423 https://www.encodeproject.org/files/ENCFF002CMQ/@@download/ENCFF002CMQ.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF788VWT bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF222UZK 6222897 ENCODE Processing Pipeline 54254c31c8f876ab8e61083e9d1c4523 https://www.encodeproject.org/files/ENCFF788VWT/@@download/ENCFF788VWT.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF651KJX bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF222UZK, ENCFF526DBU 6834126 ENCODE Processing Pipeline 30af8f308b4b5023fc7195e6db502b05 https://www.encodeproject.org/files/ENCFF651KJX/@@download/ENCFF651KJX.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF916OUG bed narrowPeak conservative idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313VQW, ENCFF419RSJ, ENCFF651KJX, ENCFF788VWT 168648 ENCODE Processing Pipeline c43ed1d7e6aa9735cf1fe51825df27ed https://www.encodeproject.org/files/ENCFF916OUG/@@download/ENCFF916OUG.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF313VQW bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF526DBU 6072430 ENCODE Processing Pipeline 42b19a4904c846138e74f4eaef8128bc https://www.encodeproject.org/files/ENCFF313VQW/@@download/ENCFF313VQW.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF517IXK bed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313VQW, ENCFF419RSJ, ENCFF651KJX, ENCFF788VWT 236998 ENCODE Processing Pipeline 25aaa0e8f779d8d52cd52bed7d3e3c34 https://www.encodeproject.org/files/ENCFF517IXK/@@download/ENCFF517IXK.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF417SUG bed narrowPeak peaks ENCSR000AKX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H4K20me1-human ENCAB000ANZ DNA see document see document False 2011-02-10 ENCODE 1 ENCFF574XYY, ENCFF726BNA 1413473 ENCODE Processing Pipeline e901405e8a3dc6fa03e73e3db3320070 https://www.encodeproject.org/files/ENCFF417SUG/@@download/ENCFF417SUG.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF189YWV bed narrowPeak peaks ENCSR000AKX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H4K20me1-human ENCAB000ANZ DNA see document see document False 2011-02-10 ENCODE 2 ENCFF450IFI, ENCFF574XYY 1529565 ENCODE Processing Pipeline 09bf88a8f7cbdefcc045add66ecc2725 https://www.encodeproject.org/files/ENCFF189YWV/@@download/ENCFF189YWV.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF363YMD bed narrowPeak peaks ENCSR000AKX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H4K20me1-human ENCAB000ANZ DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF450IFI, ENCFF574XYY, ENCFF726BNA 975378 ENCODE Processing Pipeline 0ad0b34d399e3c6444899695438bac8d https://www.encodeproject.org/files/ENCFF363YMD/@@download/ENCFF363YMD.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF139CKE bed narrowPeak replicated peaks ENCSR000AKX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H4K20me1-human ENCAB000ANZ DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF189YWV, ENCFF363YMD, ENCFF417SUG 683850 ENCODE Processing Pipeline 55f813eec36ff684dccf06c23e5fe4b9 https://www.encodeproject.org/files/ENCFF139CKE/@@download/ENCFF139CKE.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF001VMK bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 742055 Michael Snyder, Stanford 1f9d7b9a010e07c19113f25635dc0d41 https://www.encodeproject.org/files/ENCFF001VMK/@@download/ENCFF001VMK.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CVY bed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 217184 ENCODE Consortium Analysis Working Group c226b910f32186397ea83661cc905568 https://www.encodeproject.org/files/ENCFF002CVY/@@download/ENCFF002CVY.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF257FNC bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF650MOB, ENCFF943CTI 3403440 ENCODE Processing Pipeline c7c78f86b4257bf45fb74f8d62b94c06 https://www.encodeproject.org/files/ENCFF257FNC/@@download/ENCFF257FNC.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF063HEH bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF650MOB, ENCFF892MVR 3839966 ENCODE Processing Pipeline ffad26b8cc4cbfb3dcaa7882c1958b37 https://www.encodeproject.org/files/ENCFF063HEH/@@download/ENCFF063HEH.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF041PDN bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF703YNU 3393394 ENCODE Processing Pipeline 5b49952b52e03804593e5623a111521b https://www.encodeproject.org/files/ENCFF041PDN/@@download/ENCFF041PDN.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF726RDS bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF527CTN 3793663 ENCODE Processing Pipeline d56f6efef7152583267b5258d5173b9b https://www.encodeproject.org/files/ENCFF726RDS/@@download/ENCFF726RDS.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF767GKW bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF650MOB, ENCFF892MVR, ENCFF943CTI 4353278 ENCODE Processing Pipeline ae495c1e29894309630830002f904f26 https://www.encodeproject.org/files/ENCFF767GKW/@@download/ENCFF767GKW.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF858PRX bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF527CTN, ENCFF703YNU 4338955 ENCODE Processing Pipeline 1f5d2513c86102779f95d0fa3084b382 https://www.encodeproject.org/files/ENCFF858PRX/@@download/ENCFF858PRX.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF056IOC bed narrowPeak conservative idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF063HEH, ENCFF257FNC, ENCFF767GKW 160895 ENCODE Processing Pipeline 8dbc9f5ea57d5504cb9c5190c5bcbfd5 https://www.encodeproject.org/files/ENCFF056IOC/@@download/ENCFF056IOC.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF318SAW bed narrowPeak conservative idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF041PDN, ENCFF419RSJ, ENCFF726RDS, ENCFF858PRX 160858 ENCODE Processing Pipeline f3175a61160ed2eb20f0fc3e0b14b115 https://www.encodeproject.org/files/ENCFF318SAW/@@download/ENCFF318SAW.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF077UYM bed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF063HEH, ENCFF257FNC, ENCFF767GKW 166535 ENCODE Processing Pipeline 1bfdc3d3c368a4f534014f7554f50dcd https://www.encodeproject.org/files/ENCFF077UYM/@@download/ENCFF077UYM.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF672LKE bed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF041PDN, ENCFF419RSJ, ENCFF726RDS, ENCFF858PRX 166185 ENCODE Processing Pipeline 9ef1aec820c35f0188e0fcc19d0e91af https://www.encodeproject.org/files/ENCFF672LKE/@@download/ENCFF672LKE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth ENCFF001VOU bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 9245 Sherman Weissman, Yale 393ddc6c51b4af7c63d36664c0020a0f https://www.encodeproject.org/files/ENCFF001VOU/@@download/ENCFF001VOU.bed.gz hg19 archived borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYC bed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 37650 ENCODE Consortium Analysis Working Group bb6587b53d0ad228531645c844e82661 https://www.encodeproject.org/files/ENCFF002CYC/@@download/ENCFF002CYC.bed.gz hg19 archived borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF873CLE bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF457SCP, ENCFF998GMZ 2276128 ENCODE Processing Pipeline 41c577d36fc12da6bd7db479b80ba431 https://www.encodeproject.org/files/ENCFF873CLE/@@download/ENCFF873CLE.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF081YAN bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF636ISQ, ENCFF998GMZ 2161600 ENCODE Processing Pipeline 2ff4a5f8741d7d3809aec33b42266ba6 https://www.encodeproject.org/files/ENCFF081YAN/@@download/ENCFF081YAN.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF881JMT bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF457SCP, ENCFF636ISQ, ENCFF998GMZ 4179661 ENCODE Processing Pipeline 2e7fccb0eaf1844ca652272840672c89 https://www.encodeproject.org/files/ENCFF881JMT/@@download/ENCFF881JMT.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF270FXG bed narrowPeak conservative idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF081YAN, ENCFF873CLE, ENCFF881JMT 15591 ENCODE Processing Pipeline a4bd1f2dc53d378b8dde7c5792cc9edf https://www.encodeproject.org/files/ENCFF270FXG/@@download/ENCFF270FXG.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF254MPF bed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF081YAN, ENCFF873CLE, ENCFF881JMT 23891 ENCODE Processing Pipeline cc0458db40e7d908cb8702d577c43933 https://www.encodeproject.org/files/ENCFF254MPF/@@download/ENCFF254MPF.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF735OGT bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF089XMI, ENCFF332CUX 2247031 ENCODE Processing Pipeline c0f9fc15b72888604bf828085945b6ad https://www.encodeproject.org/files/ENCFF735OGT/@@download/ENCFF735OGT.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF304OMG bed narrowPeak conservative idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF735OGT, ENCFF857GVA, ENCFF998GXA 16181 ENCODE Processing Pipeline 2b42217089ac50aa4ad4783f27fee72d https://www.encodeproject.org/files/ENCFF304OMG/@@download/ENCFF304OMG.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF747ICD bed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF735OGT, ENCFF857GVA, ENCFF998GXA 22148 ENCODE Processing Pipeline 726728ad07d94d62ed145038a4cf6a6e https://www.encodeproject.org/files/ENCFF747ICD/@@download/ENCFF747ICD.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF998GXA bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF263PLG, ENCFF332CUX 2151827 ENCODE Processing Pipeline 88b844ffe29f3f29ab2fc5e1cd51d856 https://www.encodeproject.org/files/ENCFF998GXA/@@download/ENCFF998GXA.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF857GVA bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF089XMI, ENCFF263PLG, ENCFF332CUX 4176414 ENCODE Processing Pipeline 163c2640b9519deb60425b44c6f5c14a https://www.encodeproject.org/files/ENCFF857GVA/@@download/ENCFF857GVA.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF084PQN bed narrowPeak peaks ENCSR668LDD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB582RSV DNA False 2016-11-08 ENCODE 1 ENCFF245PJA, ENCFF572OAS, ENCFF574XYY 534349 ENCODE Processing Pipeline 37dd887b060f434978152ff85ca1ba30 https://www.encodeproject.org/files/ENCFF084PQN/@@download/ENCFF084PQN.bed.gz hg19 released inconsistent platforms ENCFF282LNM bed narrowPeak peaks ENCSR668LDD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB582RSV DNA False 2016-11-08 ENCODE 2 ENCFF245PJA, ENCFF407UPO 474942 ENCODE Processing Pipeline 6705e22fc90d0a75d56446611f687510 https://www.encodeproject.org/files/ENCFF282LNM/@@download/ENCFF282LNM.bed.gz hg19 released inconsistent platforms ENCFF752ALB bed narrowPeak peaks ENCSR668LDD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB582RSV DNA False 2016-11-08 ENCODE 1, 2 ENCFF245PJA, ENCFF407UPO, ENCFF572OAS, ENCFF574XYY 515693 ENCODE Processing Pipeline d5ed5167c76ee655cba159ba9353592d https://www.encodeproject.org/files/ENCFF752ALB/@@download/ENCFF752ALB.bed.gz hg19 released inconsistent platforms ENCFF737AMS bed narrowPeak replicated peaks ENCSR668LDD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB582RSV DNA False 2016-11-08 ENCODE 1, 2 ENCFF084PQN, ENCFF282LNM, ENCFF752ALB 615010 ENCODE Processing Pipeline adacb3368b5892230c64eb18e503c7ac https://www.encodeproject.org/files/ENCFF737AMS/@@download/ENCFF737AMS.bed.gz hg19 released inconsistent platforms ENCFF843VDV bed narrowPeak peaks ENCSR668LDD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB582RSV DNA False 2016-11-08 ENCODE 2 ENCFF661UGK, ENCFF829HZY 475030 ENCODE Processing Pipeline 32721d33bf928cbd2712f9c7558aa9e9 https://www.encodeproject.org/files/ENCFF843VDV/@@download/ENCFF843VDV.bed.gz GRCh38 released inconsistent platforms ENCFF381XPC bed narrowPeak peaks ENCSR668LDD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB582RSV DNA False 2016-11-08 ENCODE 1 ENCFF236SNL, ENCFF392XRJ, ENCFF829HZY 540484 ENCODE Processing Pipeline a1b99f2f2e97248e29673d6b032e9050 https://www.encodeproject.org/files/ENCFF381XPC/@@download/ENCFF381XPC.bed.gz GRCh38 released inconsistent platforms ENCFF999RPS bed narrowPeak peaks ENCSR668LDD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB582RSV DNA False 2016-11-08 ENCODE 1, 2 ENCFF236SNL, ENCFF392XRJ, ENCFF661UGK, ENCFF829HZY 515771 ENCODE Processing Pipeline eea8b1c7c9dde280eb1ffa5a752e9f06 https://www.encodeproject.org/files/ENCFF999RPS/@@download/ENCFF999RPS.bed.gz GRCh38 released inconsistent platforms ENCFF616DLO bed narrowPeak replicated peaks ENCSR668LDD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me3-human ENCAB582RSV DNA False 2016-11-08 ENCODE 1, 2 ENCFF381XPC, ENCFF843VDV, ENCFF999RPS 614272 ENCODE Processing Pipeline b8e50f9f46b92655e8e7b4a33aedcad0 https://www.encodeproject.org/files/ENCFF616DLO/@@download/ENCFF616DLO.bed.gz GRCh38 released inconsistent platforms ENCFF323KXF bed narrowPeak peaks ENCSR000APE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me3-human ENCAB000ANX DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF038JTR, ENCFF574XYY, ENCFF805FLY 179824 ENCODE Processing Pipeline a8536b264123331fb49fe87323514ddb https://www.encodeproject.org/files/ENCFF323KXF/@@download/ENCFF323KXF.bed.gz hg19 released low read depth, inconsistent platforms, low read length insufficient read depth ENCFF538EDC bed narrowPeak peaks ENCSR000APE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me3-human ENCAB000ANX DNA see document see document False 2011-02-10 ENCODE 1 ENCFF146NLP, ENCFF392XRJ 1357543 ENCODE Processing Pipeline a05defde46ce5498781ec5f1a6bc92c6 https://www.encodeproject.org/files/ENCFF538EDC/@@download/ENCFF538EDC.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length insufficient read depth ENCFF954LYH bed narrowPeak peaks ENCSR000APE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me3-human ENCAB000ANX DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF146NLP, ENCFF392XRJ, ENCFF559DHZ 170691 ENCODE Processing Pipeline 48c298d19c05c1285fba07e092953101 https://www.encodeproject.org/files/ENCFF954LYH/@@download/ENCFF954LYH.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length insufficient read depth ENCFF582WOP bed narrowPeak peaks ENCSR000APE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me3-human ENCAB000ANX DNA see document see document False 2011-02-10 ENCODE 2 ENCFF038JTR, ENCFF574XYY 256734 ENCODE Processing Pipeline c20fba68e26eb38837995fc4fc7af5f1 https://www.encodeproject.org/files/ENCFF582WOP/@@download/ENCFF582WOP.bed.gz hg19 released low read depth, inconsistent platforms, low read length insufficient read depth ENCFF388GQN bed narrowPeak peaks ENCSR000APE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me3-human ENCAB000ANX DNA see document see document False 2011-02-10 ENCODE 1 ENCFF574XYY, ENCFF805FLY 1396899 ENCODE Processing Pipeline 7d82ffd78b2636ecd6e74cd459637528 https://www.encodeproject.org/files/ENCFF388GQN/@@download/ENCFF388GQN.bed.gz hg19 released low read depth, inconsistent platforms, low read length insufficient read depth ENCFF957YZB bed narrowPeak peaks ENCSR000APE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me3-human ENCAB000ANX DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF559DHZ 259360 ENCODE Processing Pipeline 091e05c8e9e5091eb46efc518c8f252c https://www.encodeproject.org/files/ENCFF957YZB/@@download/ENCFF957YZB.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length insufficient read depth ENCFF894VEM bed narrowPeak replicated peaks ENCSR000APE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me3-human ENCAB000ANX DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF323KXF, ENCFF388GQN, ENCFF582WOP 114479 ENCODE Processing Pipeline fbb04246fcb4ebaf8eaf9109ca5b237d https://www.encodeproject.org/files/ENCFF894VEM/@@download/ENCFF894VEM.bed.gz hg19 released low read depth, inconsistent platforms, low read length insufficient read depth ENCFF371GMJ bed narrowPeak replicated peaks ENCSR000APE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me3-human ENCAB000ANX DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF538EDC, ENCFF954LYH, ENCFF957YZB 108614 ENCODE Processing Pipeline 1e181bc19a1c5f8e2a987eda7fc832f7 https://www.encodeproject.org/files/ENCFF371GMJ/@@download/ENCFF371GMJ.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length insufficient read depth ENCFF001VOX bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 11234 Sherman Weissman, Yale 0e0b41674a2ac38f2a4ddab39d1a3845 https://www.encodeproject.org/files/ENCFF001VOX/@@download/ENCFF001VOX.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYF bed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 77558 ENCODE Consortium Analysis Working Group f93fb9e05c31ec08feb48472ef6fddc6 https://www.encodeproject.org/files/ENCFF002CYF/@@download/ENCFF002CYF.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF395EZO bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF936IVO 2031796 ENCODE Processing Pipeline 044c3443fb18e648aac8a508ae8bf281 https://www.encodeproject.org/files/ENCFF395EZO/@@download/ENCFF395EZO.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF109BMB bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF615CWW, ENCFF767FSP 2026243 ENCODE Processing Pipeline 354aa2a24bf2870ab9e72ce8652019f2 https://www.encodeproject.org/files/ENCFF109BMB/@@download/ENCFF109BMB.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF685JSX bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF615CWW, ENCFF767FSP, ENCFF940QAP 4460626 ENCODE Processing Pipeline f844a058057a200a29efd1ff7e223242 https://www.encodeproject.org/files/ENCFF685JSX/@@download/ENCFF685JSX.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF608HRC bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF767FSP, ENCFF940QAP 2972550 ENCODE Processing Pipeline d9bb3f32a30df8c6c0c1094477d3345e https://www.encodeproject.org/files/ENCFF608HRC/@@download/ENCFF608HRC.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF926XFR bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF650MOB, ENCFF972AYH 2979768 ENCODE Processing Pipeline fa285962e1b274aac8605f7db6eeabb4 https://www.encodeproject.org/files/ENCFF926XFR/@@download/ENCFF926XFR.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF054VTQ bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF650MOB, ENCFF936IVO, ENCFF972AYH 4433602 ENCODE Processing Pipeline 04b7f3a31a6f8ac0178fa69a9d71f62c https://www.encodeproject.org/files/ENCFF054VTQ/@@download/ENCFF054VTQ.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF204VQS bed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF109BMB, ENCFF419RSJ, ENCFF608HRC, ENCFF685JSX 66160 ENCODE Processing Pipeline 5496fa50897dda446d76e8e279d6aa60 https://www.encodeproject.org/files/ENCFF204VQS/@@download/ENCFF204VQS.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF714VIT bed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF054VTQ, ENCFF395EZO, ENCFF926XFR 66698 ENCODE Processing Pipeline 6941bc52652563547e46896535a4debe https://www.encodeproject.org/files/ENCFF714VIT/@@download/ENCFF714VIT.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF014ZNK bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF075EEP, ENCFF303OOS 7084035 ENCODE Processing Pipeline 77ff4cb4f03880759fbea7159b5e1b9e https://www.encodeproject.org/files/ENCFF014ZNK/@@download/ENCFF014ZNK.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments ENCFF593QEG bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF075EEP, ENCFF303OOS, ENCFF310DOA 7216986 ENCODE Processing Pipeline 30b794e5afc03ed3440259a87f0dd797 https://www.encodeproject.org/files/ENCFF593QEG/@@download/ENCFF593QEG.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments ENCFF851RZA bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF075EEP, ENCFF310DOA 6682206 ENCODE Processing Pipeline 714549be6e829c4e2ec9fc57bfc6d884 https://www.encodeproject.org/files/ENCFF851RZA/@@download/ENCFF851RZA.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments ENCFF496GPP bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF620VNP 7001524 ENCODE Processing Pipeline 75460f6418e777a081ba03bd9aeeab01 https://www.encodeproject.org/files/ENCFF496GPP/@@download/ENCFF496GPP.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments ENCFF391ZOJ bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF693JVP 6555962 ENCODE Processing Pipeline f34ab2222d52cd34f97ff8050a2726f2 https://www.encodeproject.org/files/ENCFF391ZOJ/@@download/ENCFF391ZOJ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments ENCFF305IJQ bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF620VNP, ENCFF693JVP 7179390 ENCODE Processing Pipeline 84059ef020836f096443c1877b5c85a2 https://www.encodeproject.org/files/ENCFF305IJQ/@@download/ENCFF305IJQ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments ENCFF086CSF bed narrowPeak optimal idr thresholded peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF305IJQ, ENCFF391ZOJ, ENCFF419RSJ, ENCFF496GPP 674912 ENCODE Processing Pipeline 014da54ab1af05561f5b8bf9aa5822da https://www.encodeproject.org/files/ENCFF086CSF/@@download/ENCFF086CSF.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments ENCFF606CCB bed narrowPeak optimal idr thresholded peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF014ZNK, ENCFF593QEG, ENCFF851RZA 580428 ENCODE Processing Pipeline 36b3049693b2c5d3cc2c9991f4dbc99a https://www.encodeproject.org/files/ENCFF606CCB/@@download/ENCFF606CCB.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments ENCFF002CLY bed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 224220 ENCODE Consortium Analysis Working Group 542fee5cc2b0c4d57b8021a3254e21f6 https://www.encodeproject.org/files/ENCFF002CLY/@@download/ENCFF002CLY.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF207LLP bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF492NUF, ENCFF772PJM 494144 ENCODE Processing Pipeline c321c718396e5d2467e8c181b356c426 https://www.encodeproject.org/files/ENCFF207LLP/@@download/ENCFF207LLP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF352JPL bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF492NUF, ENCFF561ILM, ENCFF772PJM 4491619 ENCODE Processing Pipeline 175287546de0fdd307d11f0842a13d9f https://www.encodeproject.org/files/ENCFF352JPL/@@download/ENCFF352JPL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF087MFG bed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF207LLP, ENCFF267ADF, ENCFF352JPL, ENCFF419RSJ 133901 ENCODE Processing Pipeline 275db6953ea2392131ba3492abb1019d https://www.encodeproject.org/files/ENCFF087MFG/@@download/ENCFF087MFG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF267ADF bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF561ILM, ENCFF772PJM 3912102 ENCODE Processing Pipeline 0f6f72bcf3c57674363b47f59e42154d https://www.encodeproject.org/files/ENCFF267ADF/@@download/ENCFF267ADF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF503LMD bed narrowPeak conservative idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF207LLP, ENCFF267ADF, ENCFF352JPL, ENCFF419RSJ 102798 ENCODE Processing Pipeline 4add319a620d323eea8eab45d5b272e0 https://www.encodeproject.org/files/ENCFF503LMD/@@download/ENCFF503LMD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF410LYI bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF562PEW 5925947 ENCODE Processing Pipeline 9299dd6e7ba9c5c6ce6bbb48871ca2b4 https://www.encodeproject.org/files/ENCFF410LYI/@@download/ENCFF410LYI.bed.gz GRCh38 released missing unfiltered alignments ENCFF400FKO bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF562PEW, ENCFF931HWG 6736983 ENCODE Processing Pipeline 513e2047a5ec34c46cca53daa3030837 https://www.encodeproject.org/files/ENCFF400FKO/@@download/ENCFF400FKO.bed.gz GRCh38 released missing unfiltered alignments ENCFF752QBL bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF931HWG 5917778 ENCODE Processing Pipeline 31dcb882a4e018ea1b2224f147f0905a https://www.encodeproject.org/files/ENCFF752QBL/@@download/ENCFF752QBL.bed.gz GRCh38 released missing unfiltered alignments ENCFF323RGW bed narrowPeak optimal idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400FKO, ENCFF410LYI, ENCFF419RSJ, ENCFF752QBL 225739 ENCODE Processing Pipeline c230989b1a11aa4663f27432d27e71aa https://www.encodeproject.org/files/ENCFF323RGW/@@download/ENCFF323RGW.bed.gz GRCh38 released missing unfiltered alignments ENCFF465BGX bed narrowPeak conservative idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400FKO, ENCFF410LYI, ENCFF419RSJ, ENCFF752QBL 190571 ENCODE Processing Pipeline a76f48885f2a412d34b5c7e223b2d4fd https://www.encodeproject.org/files/ENCFF465BGX/@@download/ENCFF465BGX.bed.gz GRCh38 released missing unfiltered alignments ENCFF869TGI bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF373VCV, ENCFF936MBZ 5921029 ENCODE Processing Pipeline 5368257bee17f7e891c75689b2cf46b8 https://www.encodeproject.org/files/ENCFF869TGI/@@download/ENCFF869TGI.bed.gz hg19 released missing unfiltered alignments ENCFF827LZB bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF124VCI, ENCFF373VCV, ENCFF936MBZ 6731420 ENCODE Processing Pipeline f7013f62747402c1c0cd7c4493d0be63 https://www.encodeproject.org/files/ENCFF827LZB/@@download/ENCFF827LZB.bed.gz hg19 released missing unfiltered alignments ENCFF411DIA bed narrowPeak optimal idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF827LZB, ENCFF869TGI, ENCFF963EUU 225811 ENCODE Processing Pipeline 43ce1eff00a6b8021cc73f72e80b62a5 https://www.encodeproject.org/files/ENCFF411DIA/@@download/ENCFF411DIA.bed.gz hg19 released missing unfiltered alignments ENCFF511GKD bed narrowPeak conservative idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF827LZB, ENCFF869TGI, ENCFF963EUU 189282 ENCODE Processing Pipeline aea82ce28d87dadadcda001193b5001d https://www.encodeproject.org/files/ENCFF511GKD/@@download/ENCFF511GKD.bed.gz hg19 released missing unfiltered alignments ENCFF963EUU bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF124VCI, ENCFF936MBZ 5923434 ENCODE Processing Pipeline d068345d605435fcf94906b86ce05688 https://www.encodeproject.org/files/ENCFF963EUU/@@download/ENCFF963EUU.bed.gz hg19 released missing unfiltered alignments ENCFF001VPE bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 9304 Peggy Farnham, USC d77f4e16aa46dd3955b05e97b773c8d5 https://www.encodeproject.org/files/ENCFF001VPE/@@download/ENCFF001VPE.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYM bed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 15862 ENCODE Consortium Analysis Working Group 60ccba98270606ef6d27ffb5aff33ce6 https://www.encodeproject.org/files/ENCFF002CYM/@@download/ENCFF002CYM.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF914QSN bed narrowPeak conservative idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF138LHR, ENCFF159OAW, ENCFF419RSJ, ENCFF430YGK 10512 ENCODE Processing Pipeline c4cab48a77ea7400e5c310736feda32b https://www.encodeproject.org/files/ENCFF914QSN/@@download/ENCFF914QSN.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF159OAW bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF771NSF 2585711 ENCODE Processing Pipeline df28e61422fb6d868113790c8cb29777 https://www.encodeproject.org/files/ENCFF159OAW/@@download/ENCFF159OAW.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF430YGK bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF078BWN, ENCFF771NSF 4295731 ENCODE Processing Pipeline 3e8b8deb2340ca0dfbbc0b36bed49b62 https://www.encodeproject.org/files/ENCFF430YGK/@@download/ENCFF430YGK.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF791ZPU bed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF138LHR, ENCFF159OAW, ENCFF419RSJ, ENCFF430YGK 10865 ENCODE Processing Pipeline 2c06d5202c81ec20cb1b5e46ae39d730 https://www.encodeproject.org/files/ENCFF791ZPU/@@download/ENCFF791ZPU.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF138LHR bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF078BWN 1792003 ENCODE Processing Pipeline 1bfca16ba2cbb0b0b7504dfbcf6046a6 https://www.encodeproject.org/files/ENCFF138LHR/@@download/ENCFF138LHR.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF342EJU bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF396QHD 1846008 ENCODE Processing Pipeline 2204adb7de4c87af2ca746cd3217546a https://www.encodeproject.org/files/ENCFF342EJU/@@download/ENCFF342EJU.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF594LCH bed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF342EJU, ENCFF837CQV, ENCFF841ZNM 11703 ENCODE Processing Pipeline b644a99d8801abfd2155e186effd31ba https://www.encodeproject.org/files/ENCFF594LCH/@@download/ENCFF594LCH.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF837CQV bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF205OOU 2577171 ENCODE Processing Pipeline 22d2b8db8c9b6fb4ede4fec6f30d96fd https://www.encodeproject.org/files/ENCFF837CQV/@@download/ENCFF837CQV.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF841ZNM bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF205OOU, ENCFF396QHD 4367294 ENCODE Processing Pipeline 2908d011585f5d2341ef66972d32ad91 https://www.encodeproject.org/files/ENCFF841ZNM/@@download/ENCFF841ZNM.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF541SHT bed narrowPeak conservative idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF342EJU, ENCFF837CQV, ENCFF841ZNM 11181 ENCODE Processing Pipeline 5f0a343e53553ea4b02ff5f49ed75845 https://www.encodeproject.org/files/ENCFF541SHT/@@download/ENCFF541SHT.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF479MVC bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF455VOE, ENCFF572OMD 5043027 ENCODE Processing Pipeline faae7e59d41b29ecf813dcbfe2b03a9a https://www.encodeproject.org/files/ENCFF479MVC/@@download/ENCFF479MVC.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF882YQN bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF174JQR, ENCFF455VOE, ENCFF508DBG, ENCFF572OMD 6454217 ENCODE Processing Pipeline 62266859884ab87788c171984196e730 https://www.encodeproject.org/files/ENCFF882YQN/@@download/ENCFF882YQN.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF694BIA bed narrowPeak optimal idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF479MVC, ENCFF882YQN, ENCFF921LEX 86416 ENCODE Processing Pipeline 72a8e93e6ddf058b52d390f325564e50 https://www.encodeproject.org/files/ENCFF694BIA/@@download/ENCFF694BIA.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF921LEX bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF174JQR, ENCFF508DBG 5337244 ENCODE Processing Pipeline dda5c613676ab4d729d96d4c0e99c2a9 https://www.encodeproject.org/files/ENCFF921LEX/@@download/ENCFF921LEX.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF588TAS bed narrowPeak conservative idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF479MVC, ENCFF882YQN, ENCFF921LEX 76985 ENCODE Processing Pipeline 2d471554dd48a7534b18fb02fe4e1b4d https://www.encodeproject.org/files/ENCFF588TAS/@@download/ENCFF588TAS.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO ENCFF432KAK bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF525JGC 5309261 ENCODE Processing Pipeline a214b85a5bcc4a89039c3dfd7f7b082d https://www.encodeproject.org/files/ENCFF432KAK/@@download/ENCFF432KAK.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF814MDL bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF031YZL 5034740 ENCODE Processing Pipeline 9b8285072e7507e8bd212609258df51d https://www.encodeproject.org/files/ENCFF814MDL/@@download/ENCFF814MDL.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF167JUS bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF031YZL, ENCFF525JGC 6446888 ENCODE Processing Pipeline 5af07886449c98c598d090d9c72675c4 https://www.encodeproject.org/files/ENCFF167JUS/@@download/ENCFF167JUS.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF888TCK bed narrowPeak conservative idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF167JUS, ENCFF419RSJ, ENCFF432KAK, ENCFF814MDL 77088 ENCODE Processing Pipeline 365d981882b9ddbc6b0325758b302dc7 https://www.encodeproject.org/files/ENCFF888TCK/@@download/ENCFF888TCK.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF917HXV bed narrowPeak optimal idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF167JUS, ENCFF419RSJ, ENCFF432KAK, ENCFF814MDL 84401 ENCODE Processing Pipeline b7a99a8e16742bcfcb11974113622d69 https://www.encodeproject.org/files/ENCFF917HXV/@@download/ENCFF917HXV.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO ENCFF483OPS bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF277QYK, ENCFF477SGV, ENCFF705ZEH, ENCFF763SGF 6606501 ENCODE Processing Pipeline f989fb04464a87a582f7f149a97c6a87 https://www.encodeproject.org/files/ENCFF483OPS/@@download/ENCFF483OPS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF822WFQ bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF277QYK, ENCFF477SGV 4658233 ENCODE Processing Pipeline 878975b13bc47e7307609fc440a60b24 https://www.encodeproject.org/files/ENCFF822WFQ/@@download/ENCFF822WFQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF625DLL bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF705ZEH, ENCFF763SGF 5167937 ENCODE Processing Pipeline 993512bb20f3eefb5731f9d5dc7a5701 https://www.encodeproject.org/files/ENCFF625DLL/@@download/ENCFF625DLL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF398EQF bed narrowPeak optimal idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF483OPS, ENCFF625DLL, ENCFF822WFQ 2627 ENCODE Processing Pipeline 19e5d6b9e2057d0d4abbb65736d1ed41 https://www.encodeproject.org/files/ENCFF398EQF/@@download/ENCFF398EQF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF158UTC bed narrowPeak conservative idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF483OPS, ENCFF625DLL, ENCFF822WFQ 1732 ENCODE Processing Pipeline 50944a58277f3e170177b818980c2d61 https://www.encodeproject.org/files/ENCFF158UTC/@@download/ENCFF158UTC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF426XGS bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF198JCQ, ENCFF308PSW, ENCFF401PIJ, ENCFF762TAN 6505182 ENCODE Processing Pipeline 99350262ac7943f9227e3cb0fa4ba347 https://www.encodeproject.org/files/ENCFF426XGS/@@download/ENCFF426XGS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF066HLE bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF401PIJ 4982431 ENCODE Processing Pipeline 15e59b05b5928d30eda2613bc93d46c8 https://www.encodeproject.org/files/ENCFF066HLE/@@download/ENCFF066HLE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF570EIH bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF308PSW, ENCFF762TAN 4821490 ENCODE Processing Pipeline 4ecdb1a295234ecf76211fcaf3b89633 https://www.encodeproject.org/files/ENCFF570EIH/@@download/ENCFF570EIH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF904KHM bed narrowPeak conservative idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF066HLE, ENCFF419RSJ, ENCFF426XGS, ENCFF570EIH 2119 ENCODE Processing Pipeline a1de03cec7e8355db6639fc516bab94c https://www.encodeproject.org/files/ENCFF904KHM/@@download/ENCFF904KHM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF134HBP bed narrowPeak optimal idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF066HLE, ENCFF419RSJ, ENCFF426XGS, ENCFF570EIH 2589 ENCODE Processing Pipeline b2b9461da7b80c05b72cd1f582905da4 https://www.encodeproject.org/files/ENCFF134HBP/@@download/ENCFF134HBP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length experiment not submitted to GEO ENCFF010BGE bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF121MMO, ENCFF951BLJ 6256959 ENCODE Processing Pipeline 9b284f55a568bf23aa152ea8203a265a https://www.encodeproject.org/files/ENCFF010BGE/@@download/ENCFF010BGE.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF758WOZ bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF107DVQ, ENCFF121MMO, ENCFF951BLJ 6694983 ENCODE Processing Pipeline 107d4f48915dc6bd8f07d9fa97464d78 https://www.encodeproject.org/files/ENCFF758WOZ/@@download/ENCFF758WOZ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF813QPT bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF107DVQ, ENCFF951BLJ 6170472 ENCODE Processing Pipeline 4d42ef9f5b09bb4ed91ffe708bb6f317 https://www.encodeproject.org/files/ENCFF813QPT/@@download/ENCFF813QPT.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF415OJD bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF060WJH, ENCFF322EZT 5840560 ENCODE Processing Pipeline 888f8eaafd33a1c952ea953660c91eb0 https://www.encodeproject.org/files/ENCFF415OJD/@@download/ENCFF415OJD.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF784YPB bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF322EZT, ENCFF589UVV 5930672 ENCODE Processing Pipeline 94db2b8e35b7a93691af28503050c860 https://www.encodeproject.org/files/ENCFF784YPB/@@download/ENCFF784YPB.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF600ROI bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF060WJH, ENCFF322EZT, ENCFF589UVV 6470516 ENCODE Processing Pipeline aa321ed0fce3bebf036b4ba8b5e7063e https://www.encodeproject.org/files/ENCFF600ROI/@@download/ENCFF600ROI.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF834DYD bed narrowPeak conservative idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF415OJD, ENCFF419RSJ, ENCFF600ROI, ENCFF784YPB 130470 ENCODE Processing Pipeline f83c01e48d1a2b8c0230d9bc25eaf31b https://www.encodeproject.org/files/ENCFF834DYD/@@download/ENCFF834DYD.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF082KHJ bed narrowPeak optimal idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF415OJD, ENCFF419RSJ, ENCFF600ROI, ENCFF784YPB 134726 ENCODE Processing Pipeline 3b1111bf5ab82af96120034a079d77bd https://www.encodeproject.org/files/ENCFF082KHJ/@@download/ENCFF082KHJ.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF193JMA bed narrowPeak conservative idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF010BGE, ENCFF758WOZ, ENCFF813QPT 102641 ENCODE Processing Pipeline 12255b4dde9525ae83bc9ac4df57ba38 https://www.encodeproject.org/files/ENCFF193JMA/@@download/ENCFF193JMA.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF695CPH bed narrowPeak optimal idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF010BGE, ENCFF758WOZ, ENCFF813QPT 108206 ENCODE Processing Pipeline 84c3f2ea4e6958d0b457e43c2470ec24 https://www.encodeproject.org/files/ENCFF695CPH/@@download/ENCFF695CPH.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF569CMJ bed narrowPeak optimal idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF361CLP, ENCFF419RSJ, ENCFF593CDN, ENCFF864WDT 260548 ENCODE Processing Pipeline 9e55a5f7b19f75666b38def9aef21a8e https://www.encodeproject.org/files/ENCFF569CMJ/@@download/ENCFF569CMJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF334TMJ bed narrowPeak conservative idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF361CLP, ENCFF419RSJ, ENCFF593CDN, ENCFF864WDT 175805 ENCODE Processing Pipeline bc3939472acde74db4d78fcc9038dce9 https://www.encodeproject.org/files/ENCFF334TMJ/@@download/ENCFF334TMJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF593CDN bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF790TAN, ENCFF918JWJ 6718788 ENCODE Processing Pipeline 2e670a4fc1a5d394878d47acdf6eb2bf https://www.encodeproject.org/files/ENCFF593CDN/@@download/ENCFF593CDN.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF361CLP bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF580EBG, ENCFF712WXB, ENCFF790TAN 7034903 ENCODE Processing Pipeline f15a4e75910d0f34ddffe35443a1d781 https://www.encodeproject.org/files/ENCFF361CLP/@@download/ENCFF361CLP.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF864WDT bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF580EBG, ENCFF712WXB, ENCFF790TAN, ENCFF918JWJ 7258990 ENCODE Processing Pipeline b5ac94e5c1237396436464505a36d550 https://www.encodeproject.org/files/ENCFF864WDT/@@download/ENCFF864WDT.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF001VNA bed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 277843 Peggy Farnham, USC a4e704534e23245c58a832ba1a0b0fba https://www.encodeproject.org/files/ENCFF001VNA/@@download/ENCFF001VNA.bed.gz hg19 archived mixed read lengths inconsistent mapped reads lengths, missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CWN bed narrowPeak optimal idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 329444 ENCODE Consortium Analysis Working Group 9c3ea2d112c24d36793fd987ed9494a1 https://www.encodeproject.org/files/ENCFF002CWN/@@download/ENCFF002CWN.bed.gz hg19 archived mixed read lengths inconsistent mapped reads lengths, missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF501SRH bed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF011OSI, ENCFF355SGP 2993269 ENCODE Processing Pipeline 14edf18611fec3f25451a77a3fd92f18 https://www.encodeproject.org/files/ENCFF501SRH/@@download/ENCFF501SRH.bed.gz GRCh38 released mixed read lengths inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF392DVF bed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF201BQU, ENCFF355SGP 1478898 ENCODE Processing Pipeline 663b837a5222df48534f58f06a885bad https://www.encodeproject.org/files/ENCFF392DVF/@@download/ENCFF392DVF.bed.gz GRCh38 released mixed read lengths inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF130WXB bed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF011OSI, ENCFF201BQU, ENCFF355SGP 4831147 ENCODE Processing Pipeline 0f01d85d24e2b4841031c9c0c354a60c https://www.encodeproject.org/files/ENCFF130WXB/@@download/ENCFF130WXB.bed.gz GRCh38 released mixed read lengths inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF680USG bed narrowPeak conservative idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF130WXB, ENCFF392DVF, ENCFF419RSJ, ENCFF501SRH 299097 ENCODE Processing Pipeline 82611841a58d057a06473ce71cae3963 https://www.encodeproject.org/files/ENCFF680USG/@@download/ENCFF680USG.bed.gz GRCh38 released mixed read lengths inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF417DTI bed narrowPeak optimal idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF130WXB, ENCFF392DVF, ENCFF419RSJ, ENCFF501SRH 335871 ENCODE Processing Pipeline 85481cde4239ba77168c9dff2e3fa9cb https://www.encodeproject.org/files/ENCFF417DTI/@@download/ENCFF417DTI.bed.gz GRCh38 released mixed read lengths inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF001VMY bed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 139981 Peggy Farnham, USC 45f5d92b80be9bf03731e22373b94415 https://www.encodeproject.org/files/ENCFF001VMY/@@download/ENCFF001VMY.bed.gz hg19 archived borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CWM bed narrowPeak optimal idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 160130 ENCODE Consortium Analysis Working Group da49675ab05c9063e70e6dd11b5e566b https://www.encodeproject.org/files/ENCFF002CWM/@@download/ENCFF002CWM.bed.gz hg19 archived borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF966QRE bed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NIH 3606470 ENCODE Processing Pipeline b1306dc28cd74767f249794c34949816 https://www.encodeproject.org/files/ENCFF966QRE/@@download/ENCFF966QRE.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF225TLP bed narrowPeak optimal idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF121WVU, ENCFF419RSJ, ENCFF743VSN, ENCFF966QRE 172432 ENCODE Processing Pipeline bdda78cf9f5c0857af42c0c6077cd1c1 https://www.encodeproject.org/files/ENCFF225TLP/@@download/ENCFF225TLP.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF281NFW bed narrowPeak conservative idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF121WVU, ENCFF419RSJ, ENCFF743VSN, ENCFF966QRE 154490 ENCODE Processing Pipeline 180c9cf0871e63104895b50fb7502871 https://www.encodeproject.org/files/ENCFF281NFW/@@download/ENCFF281NFW.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF743VSN bed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF613CDR 1335954 ENCODE Processing Pipeline 573a552819f8eb9966bb31b13bb05f02 https://www.encodeproject.org/files/ENCFF743VSN/@@download/ENCFF743VSN.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF121WVU bed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NIH, ENCFF613CDR 4852043 ENCODE Processing Pipeline 1751ffb12bdaf32d0df7f276baf5551b https://www.encodeproject.org/files/ENCFF121WVU/@@download/ENCFF121WVU.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF001VCP bed narrowPeak peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 2283604 Peggy Farnham, USC f6617bce31addd03fb9ad1307fb70128 https://www.encodeproject.org/files/ENCFF001VCP/@@download/ENCFF001VCP.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF482YZD bed narrowPeak peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 1 ENCFF355SGP, ENCFF915XIL 4047111 ENCODE Processing Pipeline 6b339b9f74f3e6adcdb0979db0397363 https://www.encodeproject.org/files/ENCFF482YZD/@@download/ENCFF482YZD.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample insufficient read depth ENCFF439XWU bed narrowPeak peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF330YFF, ENCFF355SGP, ENCFF915XIL 3578909 ENCODE Processing Pipeline 02c0308d8891d96b7c4752ae6af63aee https://www.encodeproject.org/files/ENCFF439XWU/@@download/ENCFF439XWU.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample insufficient read depth ENCFF956JSE bed narrowPeak peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 2 ENCFF330YFF, ENCFF355SGP 3790165 ENCODE Processing Pipeline 344f8c11ae84efce5c6fb938607bb499 https://www.encodeproject.org/files/ENCFF956JSE/@@download/ENCFF956JSE.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample insufficient read depth ENCFF031FSF bed narrowPeak replicated peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF439XWU, ENCFF482YZD, ENCFF956JSE 3580016 ENCODE Processing Pipeline 90a06168472cf34bd7ae734da4b1dd39 https://www.encodeproject.org/files/ENCFF031FSF/@@download/ENCFF031FSF.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample insufficient read depth ENCFF047FUX bed narrowPeak peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 2 ENCFF051ZZR, ENCFF162VJX 3790158 ENCODE Processing Pipeline 253713193d6e7984ea1893b23f9ba2b6 https://www.encodeproject.org/files/ENCFF047FUX/@@download/ENCFF047FUX.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample insufficient read depth ENCFF565WMG bed narrowPeak peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF051ZZR, ENCFF162VJX, ENCFF676ORH 3623024 ENCODE Processing Pipeline 482fff7719dd055b4afe1cf95bbb285b https://www.encodeproject.org/files/ENCFF565WMG/@@download/ENCFF565WMG.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample insufficient read depth ENCFF126QYP bed narrowPeak replicated peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF047FUX, ENCFF565WMG, ENCFF936EYU 3586965 ENCODE Processing Pipeline 6006d167e82ec4dc49c4c4df7cec9127 https://www.encodeproject.org/files/ENCFF126QYP/@@download/ENCFF126QYP.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample insufficient read depth ENCFF936EYU bed narrowPeak peaks ENCSR000EWB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27me3-human ENCAB000ANC DNA see document see document False 2011-05-19 ENCODE 1 ENCFF051ZZR, ENCFF676ORH 4045565 ENCODE Processing Pipeline 33cf6ed087dbfeaf10b14a00273e1144 https://www.encodeproject.org/files/ENCFF936EYU/@@download/ENCFF936EYU.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample insufficient read depth ENCFF001VPO bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 130531 Peggy Farnham, USC 72c40b7f43274ade845df679cb3679b3 https://www.encodeproject.org/files/ENCFF001VPO/@@download/ENCFF001VPO.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF002CYU bed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 47845 ENCODE Consortium Analysis Working Group fc3a851a27dfec1fdf9cd1eab0a216e3 https://www.encodeproject.org/files/ENCFF002CYU/@@download/ENCFF002CYU.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF479ZWB bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF826BOX 5855561 ENCODE Processing Pipeline edd9eb1c92b6ea69c50d79c78e91dcc7 https://www.encodeproject.org/files/ENCFF479ZWB/@@download/ENCFF479ZWB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF854CCF bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF943KAZ 6238769 ENCODE Processing Pipeline 31834bde4e421dc304e7711837e58986 https://www.encodeproject.org/files/ENCFF854CCF/@@download/ENCFF854CCF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF904PBE bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF826BOX, ENCFF943KAZ 6744439 ENCODE Processing Pipeline ff87019917a4d03f518d2dd9b1b3cf0a https://www.encodeproject.org/files/ENCFF904PBE/@@download/ENCFF904PBE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF521HBG bed narrowPeak conservative idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF479ZWB, ENCFF854CCF, ENCFF904PBE 27409 ENCODE Processing Pipeline 91f643a9a0af56abc568a0d97bc3f7f8 https://www.encodeproject.org/files/ENCFF521HBG/@@download/ENCFF521HBG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF344QKL bed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF479ZWB, ENCFF854CCF, ENCFF904PBE 56693 ENCODE Processing Pipeline e1dcb354f98030f0cad5ea10cb6b8428 https://www.encodeproject.org/files/ENCFF344QKL/@@download/ENCFF344QKL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF478NGK bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF444ZUH, ENCFF474ETY 6745206 ENCODE Processing Pipeline b37f0a6959ccead08a926edb7f87b76d https://www.encodeproject.org/files/ENCFF478NGK/@@download/ENCFF478NGK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF390BXU bed narrowPeak conservative idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419HQM, ENCFF419RSJ, ENCFF478NGK, ENCFF873RKZ 27631 ENCODE Processing Pipeline 52d886e3f89aa5c369051c116fa4fb54 https://www.encodeproject.org/files/ENCFF390BXU/@@download/ENCFF390BXU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF873RKZ bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF474ETY 6239690 ENCODE Processing Pipeline 41d6268be360c8888da536d9ddf0f0d9 https://www.encodeproject.org/files/ENCFF873RKZ/@@download/ENCFF873RKZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF498VQZ bed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419HQM, ENCFF419RSJ, ENCFF478NGK, ENCFF873RKZ 56127 ENCODE Processing Pipeline eea2b83acf541e36d2707bc9f0075ad0 https://www.encodeproject.org/files/ENCFF498VQZ/@@download/ENCFF498VQZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF419HQM bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF444ZUH 5863112 ENCODE Processing Pipeline 8e9ed1068975902c98442cff532e21fb https://www.encodeproject.org/files/ENCFF419HQM/@@download/ENCFF419HQM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF098MNE bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF129RYE, ENCFF712WXB, ENCFF790TAN 7190812 ENCODE Processing Pipeline d7935bb743438cfa2f82636a34b7b201 https://www.encodeproject.org/files/ENCFF098MNE/@@download/ENCFF098MNE.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF756UDD bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF420DGT, ENCFF712WXB 6854310 ENCODE Processing Pipeline d1c6eeddfc90e75e760a0d31d26753f6 https://www.encodeproject.org/files/ENCFF756UDD/@@download/ENCFF756UDD.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF825GRZ bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF129RYE, ENCFF420DGT, ENCFF712WXB, ENCFF790TAN 7271805 ENCODE Processing Pipeline 52bd0192a1c344c4a3afe1e4f450be33 https://www.encodeproject.org/files/ENCFF825GRZ/@@download/ENCFF825GRZ.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF584ZGO bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF160VXC, ENCFF282YII, ENCFF682WTZ, ENCFF834TUP 7248295 ENCODE Processing Pipeline a1ed7479c644b147a2bb7e692edf573f https://www.encodeproject.org/files/ENCFF584ZGO/@@download/ENCFF584ZGO.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF620EUP bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF160VXC, ENCFF682WTZ, ENCFF834TUP 7172221 ENCODE Processing Pipeline 1dfaa7944b26740a476409b2fbc05319 https://www.encodeproject.org/files/ENCFF620EUP/@@download/ENCFF620EUP.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF675VGK bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF282YII, ENCFF834TUP 6846730 ENCODE Processing Pipeline 8d55e7ff85dcc1b6539585c43df576c4 https://www.encodeproject.org/files/ENCFF675VGK/@@download/ENCFF675VGK.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF691VAI bed narrowPeak conservative idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF584ZGO, ENCFF620EUP, ENCFF675VGK 443702 ENCODE Processing Pipeline fa839911c6cf87bab1251c987b0f18bc https://www.encodeproject.org/files/ENCFF691VAI/@@download/ENCFF691VAI.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF577EBU bed narrowPeak conservative idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF098MNE, ENCFF419RSJ, ENCFF756UDD, ENCFF825GRZ 450611 ENCODE Processing Pipeline cfbbfda01870acd751cd4025a009b254 https://www.encodeproject.org/files/ENCFF577EBU/@@download/ENCFF577EBU.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF165BCW bed narrowPeak optimal idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF584ZGO, ENCFF620EUP, ENCFF675VGK 472483 ENCODE Processing Pipeline 400dadc1bad41dafe27291e51353005f https://www.encodeproject.org/files/ENCFF165BCW/@@download/ENCFF165BCW.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking ENCFF856HUK bed narrowPeak optimal idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF098MNE, ENCFF419RSJ, ENCFF756UDD, ENCFF825GRZ 479826 ENCODE Processing Pipeline 3fce17d32adedb8d11def5e87ff3d0fe https://www.encodeproject.org/files/ENCFF856HUK/@@download/ENCFF856HUK.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking ENCFF490XLD bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF834TUP, ENCFF984QQT 7111483 ENCODE Processing Pipeline 5c956902a94641b04b8a3f59bc08f2c6 https://www.encodeproject.org/files/ENCFF490XLD/@@download/ENCFF490XLD.bed.gz hg19 released mild to moderate bottlenecking ENCFF499UMV bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF160VXC, ENCFF834TUP, ENCFF892UVF, ENCFF984QQT 7313485 ENCODE Processing Pipeline 2541b212e7722e9bc107563074d7984d https://www.encodeproject.org/files/ENCFF499UMV/@@download/ENCFF499UMV.bed.gz hg19 released mild to moderate bottlenecking ENCFF569IJM bed narrowPeak conservative idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF331TXU, ENCFF490XLD, ENCFF499UMV 527405 ENCODE Processing Pipeline 64a4dc051bfe39d8ba6a9ea9e1f9cdea https://www.encodeproject.org/files/ENCFF569IJM/@@download/ENCFF569IJM.bed.gz hg19 released mild to moderate bottlenecking ENCFF331TXU bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF892UVF 7232667 ENCODE Processing Pipeline b34b2ecd91e077a9bf871828610a093d https://www.encodeproject.org/files/ENCFF331TXU/@@download/ENCFF331TXU.bed.gz hg19 released mild to moderate bottlenecking ENCFF838COI bed narrowPeak optimal idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF331TXU, ENCFF490XLD, ENCFF499UMV 629731 ENCODE Processing Pipeline 29b3f9c5729c3aa115f9cfa92da97076 https://www.encodeproject.org/files/ENCFF838COI/@@download/ENCFF838COI.bed.gz hg19 released mild to moderate bottlenecking ENCFF097GPW bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF042LKP, ENCFF712WXB 7107412 ENCODE Processing Pipeline 7727f571f33ee47561150d6c024a6f74 https://www.encodeproject.org/files/ENCFF097GPW/@@download/ENCFF097GPW.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF483BRD bed narrowPeak optimal idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF097GPW, ENCFF419RSJ, ENCFF457ZDJ, ENCFF858BKR 623757 ENCODE Processing Pipeline 3424efdcc9ed08c70164c9d973284841 https://www.encodeproject.org/files/ENCFF483BRD/@@download/ENCFF483BRD.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF858BKR bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF042LKP, ENCFF342FIU, ENCFF712WXB, ENCFF790TAN 7317511 ENCODE Processing Pipeline 6587766178988746a43b2357c305861b https://www.encodeproject.org/files/ENCFF858BKR/@@download/ENCFF858BKR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF493NZN bed narrowPeak conservative idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF097GPW, ENCFF419RSJ, ENCFF457ZDJ, ENCFF858BKR 526774 ENCODE Processing Pipeline d6d3227605f8463b5d30f81339ea1c32 https://www.encodeproject.org/files/ENCFF493NZN/@@download/ENCFF493NZN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF457ZDJ bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF342FIU, ENCFF712WXB, ENCFF790TAN 7235079 ENCODE Processing Pipeline 9ccb995acfc2783cc2b1dc7cb8f61abb https://www.encodeproject.org/files/ENCFF457ZDJ/@@download/ENCFF457ZDJ.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF702DXT bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF557QLG 6648349 ENCODE Processing Pipeline 917cbd4b0f4338169a2c9cbb3d57ab32 https://www.encodeproject.org/files/ENCFF702DXT/@@download/ENCFF702DXT.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF444LCK bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF158BYF 6317319 ENCODE Processing Pipeline 04d711d3a5462a05c9058e7f166a1387 https://www.encodeproject.org/files/ENCFF444LCK/@@download/ENCFF444LCK.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF840ZAM bed narrowPeak conservative idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF444LCK, ENCFF702DXT, ENCFF950QEI 116854 ENCODE Processing Pipeline 26bef3e658884fa3c1a2245a0645a8c8 https://www.encodeproject.org/files/ENCFF840ZAM/@@download/ENCFF840ZAM.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF950QEI bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF158BYF, ENCFF557QLG 7156972 ENCODE Processing Pipeline e3752a36a4ba63ba0ee052e127370976 https://www.encodeproject.org/files/ENCFF950QEI/@@download/ENCFF950QEI.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF931SVP bed narrowPeak optimal idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF444LCK, ENCFF702DXT, ENCFF950QEI 192620 ENCODE Processing Pipeline 5645ffd3c2406c5968e2bbe78f27c11a https://www.encodeproject.org/files/ENCFF931SVP/@@download/ENCFF931SVP.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF993MOQ bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF387AIX, ENCFF904PIO 6311225 ENCODE Processing Pipeline 11f6ed6c2dc07141fabb2e9e59bf1606 https://www.encodeproject.org/files/ENCFF993MOQ/@@download/ENCFF993MOQ.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF401ROZ bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF070QUN, ENCFF387AIX, ENCFF904PIO 7156529 ENCODE Processing Pipeline 74c2adb3a26e22eadbffdd10641b898a https://www.encodeproject.org/files/ENCFF401ROZ/@@download/ENCFF401ROZ.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF939ETO bed narrowPeak conservative idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF347CVK, ENCFF401ROZ, ENCFF993MOQ 118707 ENCODE Processing Pipeline 482a64ac5276f1a7babed1320153ec49 https://www.encodeproject.org/files/ENCFF939ETO/@@download/ENCFF939ETO.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF580QGA bed narrowPeak optimal idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF347CVK, ENCFF401ROZ, ENCFF993MOQ 195207 ENCODE Processing Pipeline e5b33520cb44052d0d417f7ef5d0e38a https://www.encodeproject.org/files/ENCFF580QGA/@@download/ENCFF580QGA.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF347CVK bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF070QUN, ENCFF387AIX 6644140 ENCODE Processing Pipeline 1973f2cfc89d73a80ac9d8fb35c64493 https://www.encodeproject.org/files/ENCFF347CVK/@@download/ENCFF347CVK.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF166ADO bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF253HOC 6744640 ENCODE Processing Pipeline 2dbf10c36f3953e0b10d7c52be02cce3 https://www.encodeproject.org/files/ENCFF166ADO/@@download/ENCFF166ADO.bed.gz GRCh38 released missing unfiltered alignments ENCFF748CBU bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF773DBT 6770747 ENCODE Processing Pipeline 9653024a160550a16d25d441f7574d22 https://www.encodeproject.org/files/ENCFF748CBU/@@download/ENCFF748CBU.bed.gz GRCh38 released missing unfiltered alignments ENCFF271XRG bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF253HOC, ENCFF773DBT 7216327 ENCODE Processing Pipeline 707c41f984e9e37d528b919a85415b83 https://www.encodeproject.org/files/ENCFF271XRG/@@download/ENCFF271XRG.bed.gz GRCh38 released missing unfiltered alignments ENCFF984LWO bed narrowPeak conservative idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF166ADO, ENCFF271XRG, ENCFF419RSJ, ENCFF748CBU 754454 ENCODE Processing Pipeline 8f50cf77f97709ed1c5ecd57a93c49c2 https://www.encodeproject.org/files/ENCFF984LWO/@@download/ENCFF984LWO.bed.gz GRCh38 released missing unfiltered alignments ENCFF393CCU bed narrowPeak optimal idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF166ADO, ENCFF271XRG, ENCFF419RSJ, ENCFF748CBU 816340 ENCODE Processing Pipeline 0f9a01aecf249adadda32dae613ae85e https://www.encodeproject.org/files/ENCFF393CCU/@@download/ENCFF393CCU.bed.gz GRCh38 released missing unfiltered alignments ENCFF638THQ bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF308BKD, ENCFF500EQZ 6831070 ENCODE Processing Pipeline f0b5bdd047d8393493505853dc72eedc https://www.encodeproject.org/files/ENCFF638THQ/@@download/ENCFF638THQ.bed.gz hg19 released missing unfiltered alignments ENCFF703AYW bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF500EQZ, ENCFF743FRI 6754100 ENCODE Processing Pipeline d8dd05a8c34d3e187849ab51b732871e https://www.encodeproject.org/files/ENCFF703AYW/@@download/ENCFF703AYW.bed.gz hg19 released missing unfiltered alignments ENCFF927JBT bed narrowPeak optimal idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF421KPL, ENCFF638THQ, ENCFF703AYW 830198 ENCODE Processing Pipeline 3767fbcb94979dba34dfa376996af7a6 https://www.encodeproject.org/files/ENCFF927JBT/@@download/ENCFF927JBT.bed.gz hg19 released missing unfiltered alignments ENCFF921SVE bed narrowPeak conservative idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF421KPL, ENCFF638THQ, ENCFF703AYW 761326 ENCODE Processing Pipeline 7ce7acc1806b1034a155c489cdb64ab3 https://www.encodeproject.org/files/ENCFF921SVE/@@download/ENCFF921SVE.bed.gz hg19 released missing unfiltered alignments ENCFF421KPL bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF308BKD, ENCFF500EQZ, ENCFF743FRI 7241734 ENCODE Processing Pipeline 58b8adab70591db2724873566c7f03ac https://www.encodeproject.org/files/ENCFF421KPL/@@download/ENCFF421KPL.bed.gz hg19 released missing unfiltered alignments ENCFF002CMU bed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 71409 ENCODE Consortium Analysis Working Group 7cfa19d276cd276596c0eca1da30d958 https://www.encodeproject.org/files/ENCFF002CMU/@@download/ENCFF002CMU.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF950RJP bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF680COV, ENCFF772PJM 3809186 ENCODE Processing Pipeline 9b71261baab03d5c895ccffc7fea547b https://www.encodeproject.org/files/ENCFF950RJP/@@download/ENCFF950RJP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF130TPD bed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF061TOQ, ENCFF419RSJ, ENCFF510COO, ENCFF950RJP 106296 ENCODE Processing Pipeline b41833219a82f27ff1db888e32c31b17 https://www.encodeproject.org/files/ENCFF130TPD/@@download/ENCFF130TPD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF510COO bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF393ZAK, ENCFF772PJM 4285892 ENCODE Processing Pipeline 079c679cbd2ec6d3b42623ad499f49a0 https://www.encodeproject.org/files/ENCFF510COO/@@download/ENCFF510COO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF061TOQ bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393ZAK, ENCFF680COV, ENCFF772PJM 4777215 ENCODE Processing Pipeline bcfd6b78c9afa0aacc5f4588ede61829 https://www.encodeproject.org/files/ENCFF061TOQ/@@download/ENCFF061TOQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF144DMD bed narrowPeak conservative idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF061TOQ, ENCFF419RSJ, ENCFF510COO, ENCFF950RJP 84767 ENCODE Processing Pipeline f8a3a674d78f788bd85453d0e28e5e90 https://www.encodeproject.org/files/ENCFF144DMD/@@download/ENCFF144DMD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF559KAV bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF290MFM, ENCFF834TUP 7220426 ENCODE Processing Pipeline 67f2d90491c50a8dd513d9433326ee96 https://www.encodeproject.org/files/ENCFF559KAV/@@download/ENCFF559KAV.bed.gz hg19 released mild to moderate bottlenecking, low read depth ENCFF996ZGL bed narrowPeak optimal idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF486RQW, ENCFF559KAV, ENCFF820UXS 1088718 ENCODE Processing Pipeline 7dc77d245f171e4a785144bb7ec5342c https://www.encodeproject.org/files/ENCFF996ZGL/@@download/ENCFF996ZGL.bed.gz hg19 released mild to moderate bottlenecking, low read depth ENCFF820UXS bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF163ARJ, ENCFF290MFM, ENCFF834TUP 7233158 ENCODE Processing Pipeline bee511eb11daba31bae945c82eaebc64 https://www.encodeproject.org/files/ENCFF820UXS/@@download/ENCFF820UXS.bed.gz hg19 released mild to moderate bottlenecking, low read depth ENCFF602NCB bed narrowPeak conservative idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF486RQW, ENCFF559KAV, ENCFF820UXS 871663 ENCODE Processing Pipeline 69cc024cd6a350ea564706807f60c6f1 https://www.encodeproject.org/files/ENCFF602NCB/@@download/ENCFF602NCB.bed.gz hg19 released mild to moderate bottlenecking, low read depth ENCFF486RQW bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF160VXC, ENCFF163ARJ 6476407 ENCODE Processing Pipeline fbfee1e1f572133bd719fcf43a6ed903 https://www.encodeproject.org/files/ENCFF486RQW/@@download/ENCFF486RQW.bed.gz hg19 released mild to moderate bottlenecking, low read depth ENCFF839JZV bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF077NYA, ENCFF712WXB, ENCFF790TAN 7141204 ENCODE Processing Pipeline 476ac3e0225d92a71fd82a03729d3ab5 https://www.encodeproject.org/files/ENCFF839JZV/@@download/ENCFF839JZV.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth ENCFF610EDP bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF790TAN, ENCFF904OXK 6329803 ENCODE Processing Pipeline a6ff5eb80f5b136d4580ccaaaad7b699 https://www.encodeproject.org/files/ENCFF610EDP/@@download/ENCFF610EDP.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth ENCFF184OEL bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF077NYA, ENCFF712WXB, ENCFF790TAN, ENCFF904OXK 7208505 ENCODE Processing Pipeline a3aba52733269e8b29fa4155ec7b72a4 https://www.encodeproject.org/files/ENCFF184OEL/@@download/ENCFF184OEL.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth ENCFF825LBQ bed narrowPeak conservative idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF184OEL, ENCFF419RSJ, ENCFF610EDP, ENCFF839JZV 868829 ENCODE Processing Pipeline 5a251b14e8176d83630b79dd1f79a9e4 https://www.encodeproject.org/files/ENCFF825LBQ/@@download/ENCFF825LBQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth ENCFF104MXG bed narrowPeak optimal idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF184OEL, ENCFF419RSJ, ENCFF610EDP, ENCFF839JZV 1093881 ENCODE Processing Pipeline deefb2b075a1019cafbcf0117822e8dc https://www.encodeproject.org/files/ENCFF104MXG/@@download/ENCFF104MXG.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth ENCFF596QQG bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF104VVO, ENCFF720AUK, ENCFF796JTX 6119533 ENCODE Processing Pipeline b8bcc7de70a19175d487e4244f91e19f https://www.encodeproject.org/files/ENCFF596QQG/@@download/ENCFF596QQG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF108MZX bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF246CLD, ENCFF720AUK, ENCFF796JTX 5951461 ENCODE Processing Pipeline c8f6404ade36f5adf95dfc7c0bd287d2 https://www.encodeproject.org/files/ENCFF108MZX/@@download/ENCFF108MZX.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF013EHI bed narrowPeak optimal idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF108MZX, ENCFF419RSJ, ENCFF505RTU, ENCFF596QQG 58792 ENCODE Processing Pipeline ec6f331bac36a3d59fc3b1c9c9a1aef2 https://www.encodeproject.org/files/ENCFF013EHI/@@download/ENCFF013EHI.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF910WWV bed narrowPeak conservative idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF108MZX, ENCFF419RSJ, ENCFF505RTU, ENCFF596QQG 46020 ENCODE Processing Pipeline d9bfbad5d75440c5348e0129e544fd3a https://www.encodeproject.org/files/ENCFF910WWV/@@download/ENCFF910WWV.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF505RTU bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF104VVO, ENCFF246CLD, ENCFF720AUK, ENCFF796JTX 6778720 ENCODE Processing Pipeline d7a99efd5ba2f8241b7b11313a9cfdf2 https://www.encodeproject.org/files/ENCFF505RTU/@@download/ENCFF505RTU.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF649PUW bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF158RWF, ENCFF262CJE, ENCFF506DFV 6116974 ENCODE Processing Pipeline 547bd70b8c068f6f139acc80b31b39da https://www.encodeproject.org/files/ENCFF649PUW/@@download/ENCFF649PUW.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF511NCS bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF158RWF, ENCFF262CJE, ENCFF506DFV, ENCFF851YDT 6775439 ENCODE Processing Pipeline b26eb16256e9113023802d6813e2adf1 https://www.encodeproject.org/files/ENCFF511NCS/@@download/ENCFF511NCS.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF384FEX bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF851YDT 5954915 ENCODE Processing Pipeline cd518e0e1b3e7bf35d91cf484ccb44f1 https://www.encodeproject.org/files/ENCFF384FEX/@@download/ENCFF384FEX.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF987GXS bed narrowPeak conservative idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF384FEX, ENCFF511NCS, ENCFF649PUW 45337 ENCODE Processing Pipeline 1813a53bd4e912a3e39083983ac631e7 https://www.encodeproject.org/files/ENCFF987GXS/@@download/ENCFF987GXS.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF310AGG bed narrowPeak optimal idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF384FEX, ENCFF511NCS, ENCFF649PUW 59622 ENCODE Processing Pipeline 8660b9cd4ca65717017ecba1ad02391d https://www.encodeproject.org/files/ENCFF310AGG/@@download/ENCFF310AGG.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF252DWA bed narrowPeak peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF000BVZ, ENCFF000BWX, ENCFF000BWZ 955183 Anshul Kundaje, Stanford 55724cbc8f765f68614183fcf83eb993 https://www.encodeproject.org/files/ENCFF252DWA/@@download/ENCFF252DWA.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF240QQW bed narrowPeak peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 1 ENCFF301TVL, ENCFF392XRJ 1672332 ENCODE Processing Pipeline 256df0a15ff47c37b6561554040c637a https://www.encodeproject.org/files/ENCFF240QQW/@@download/ENCFF240QQW.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF675ADR bed narrowPeak peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF879BWC 1291133 ENCODE Processing Pipeline d2fb72174a55e5911ee54453ed2aa85d https://www.encodeproject.org/files/ENCFF675ADR/@@download/ENCFF675ADR.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF437DPT bed narrowPeak peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF301TVL, ENCFF392XRJ, ENCFF879BWC 1453272 ENCODE Processing Pipeline 154b30659e5deb2b2eef4b5b74d0aee9 https://www.encodeproject.org/files/ENCFF437DPT/@@download/ENCFF437DPT.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF038DDS bed narrowPeak replicated peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF240QQW, ENCFF437DPT, ENCFF675ADR 1298162 ENCODE Processing Pipeline b24e283c2be89cbc2679eeb1688e4962 https://www.encodeproject.org/files/ENCFF038DDS/@@download/ENCFF038DDS.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF244ZLG bed narrowPeak peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE ENCFF110OFN, ENCFF949HSL 1281911 Anshul Kundaje, Stanford 71755ced074155b9095342bf9c98f79f https://www.encodeproject.org/files/ENCFF244ZLG/@@download/ENCFF244ZLG.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF044JNJ bed narrowPeak replicated peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF578UBP, ENCFF702CFZ, ENCFF931VAQ 1272456 ENCODE Processing Pipeline 78c3b3b8e6cde054831acaeb5cdffe5b https://www.encodeproject.org/files/ENCFF044JNJ/@@download/ENCFF044JNJ.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF702CFZ bed narrowPeak peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 2 ENCFF070PWH, ENCFF574XYY 1226624 ENCODE Processing Pipeline 739b353dc094e194cf8ab3ff5881e28c https://www.encodeproject.org/files/ENCFF702CFZ/@@download/ENCFF702CFZ.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF931VAQ bed narrowPeak peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF070PWH, ENCFF384ZZM, ENCFF574XYY 1439258 ENCODE Processing Pipeline 6108853e10cfafd0f882b4225800b73f https://www.encodeproject.org/files/ENCFF931VAQ/@@download/ENCFF931VAQ.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF578UBP bed narrowPeak peaks ENCSR000AKP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K27ac-human ENCAB000ANA DNA see document see document False 2011-02-10 ENCODE 1 ENCFF384ZZM, ENCFF574XYY 1671283 ENCODE Processing Pipeline 77aa3bd456a338d00775d39e711e4a87 https://www.encodeproject.org/files/ENCFF578UBP/@@download/ENCFF578UBP.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth extremely low read depth ENCFF001VOG bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 256161 Sherman Weissman, Yale 8d7e4dc4e4c06518eba48533e260b289 https://www.encodeproject.org/files/ENCFF001VOG/@@download/ENCFF001VOG.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CXP bed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 339689 ENCODE Consortium Analysis Working Group 595e0f35033a8d5a007f811923465a60 https://www.encodeproject.org/files/ENCFF002CXP/@@download/ENCFF002CXP.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF439GEX bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF191CWT, ENCFF482LDC 2977390 ENCODE Processing Pipeline 097ae558539e388f566666a798bcb40c https://www.encodeproject.org/files/ENCFF439GEX/@@download/ENCFF439GEX.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF382GUS bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF191CWT, ENCFF482LDC, ENCFF536TPK 5910082 ENCODE Processing Pipeline b3294ec7a0f631d7f3616a5a6e3736fa https://www.encodeproject.org/files/ENCFF382GUS/@@download/ENCFF382GUS.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF960XPL bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF092XNX, ENCFF204HNK, ENCFF331ARQ 5909698 ENCODE Processing Pipeline eafe5d6aa8253767b2ff8a43a373dedc https://www.encodeproject.org/files/ENCFF960XPL/@@download/ENCFF960XPL.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF504GWC bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF092XNX, ENCFF331ARQ 3084780 ENCODE Processing Pipeline 579a7e054022988ab00ef76fb44b1f7a https://www.encodeproject.org/files/ENCFF504GWC/@@download/ENCFF504GWC.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF236JJW bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF536TPK 4826877 ENCODE Processing Pipeline 54e0613317285100475f69a1ef9c4643 https://www.encodeproject.org/files/ENCFF236JJW/@@download/ENCFF236JJW.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF070AMD bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF204HNK, ENCFF331ARQ 4885849 ENCODE Processing Pipeline b60020d752c55ab932b317dfae0c5108 https://www.encodeproject.org/files/ENCFF070AMD/@@download/ENCFF070AMD.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF231OJM bed narrowPeak conservative idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF070AMD, ENCFF504GWC, ENCFF960XPL 368368 ENCODE Processing Pipeline bad16d7b6f9665b5936a9374ea333c51 https://www.encodeproject.org/files/ENCFF231OJM/@@download/ENCFF231OJM.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF853ZMA bed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF070AMD, ENCFF504GWC, ENCFF960XPL 383287 ENCODE Processing Pipeline 414b0ad344508990af3dd892c5653dd3 https://www.encodeproject.org/files/ENCFF853ZMA/@@download/ENCFF853ZMA.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF857WHF bed narrowPeak conservative idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF236JJW, ENCFF382GUS, ENCFF419RSJ, ENCFF439GEX 371203 ENCODE Processing Pipeline 126e57955e13ccad4e0fba1aabe85dc3 https://www.encodeproject.org/files/ENCFF857WHF/@@download/ENCFF857WHF.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF099NYA bed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF236JJW, ENCFF382GUS, ENCFF419RSJ, ENCFF439GEX 383286 ENCODE Processing Pipeline c596a6ebffcfce8c02e2dedd3db4468e https://www.encodeproject.org/files/ENCFF099NYA/@@download/ENCFF099NYA.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF692PZN bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF134DGA, ENCFF504MHQ 5762717 ENCODE Processing Pipeline 451091687b3aefde73fb058b458e4c48 https://www.encodeproject.org/files/ENCFF692PZN/@@download/ENCFF692PZN.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF645BHJ bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF504MHQ, ENCFF956MXT 5519587 ENCODE Processing Pipeline 5be4408221069af6c93c53b0359ca945 https://www.encodeproject.org/files/ENCFF645BHJ/@@download/ENCFF645BHJ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF421DGE bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF134DGA, ENCFF504MHQ, ENCFF956MXT 6621004 ENCODE Processing Pipeline e080afe1cdb9112a0faa67d47f8cc323 https://www.encodeproject.org/files/ENCFF421DGE/@@download/ENCFF421DGE.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF812JMG bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF102ZZG, ENCFF656BKZ 5592616 ENCODE Processing Pipeline 4e3ba65ee3b7bbaf17915f4298cae7d8 https://www.encodeproject.org/files/ENCFF812JMG/@@download/ENCFF812JMG.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF543FMX bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF102ZZG, ENCFF670SFK 5394840 ENCODE Processing Pipeline 4da059ec466c4e74d9abf7f953967290 https://www.encodeproject.org/files/ENCFF543FMX/@@download/ENCFF543FMX.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF268KZF bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF102ZZG, ENCFF656BKZ, ENCFF670SFK 6470265 ENCODE Processing Pipeline 562aef28aefc237c01668768e3f10222 https://www.encodeproject.org/files/ENCFF268KZF/@@download/ENCFF268KZF.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF804KSB bed narrowPeak optimal idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF268KZF, ENCFF419RSJ, ENCFF543FMX, ENCFF812JMG 388044 ENCODE Processing Pipeline e04edf5fc2da7d2b966ebe8ec4e4296c https://www.encodeproject.org/files/ENCFF804KSB/@@download/ENCFF804KSB.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF332WRL bed narrowPeak conservative idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF421DGE, ENCFF645BHJ, ENCFF692PZN 330015 ENCODE Processing Pipeline 64dd3223c154b5af1dd1e9f5a68f6bed https://www.encodeproject.org/files/ENCFF332WRL/@@download/ENCFF332WRL.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF404YMX bed narrowPeak optimal idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF421DGE, ENCFF645BHJ, ENCFF692PZN 364092 ENCODE Processing Pipeline 45811baa3b4f022a78ddb6fa4be88278 https://www.encodeproject.org/files/ENCFF404YMX/@@download/ENCFF404YMX.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF465UUK bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF774RUP, ENCFF780MVW, ENCFF892LAS 7244276 ENCODE Processing Pipeline b8729c74c23dbe3c71f8a3245a8bb84e https://www.encodeproject.org/files/ENCFF465UUK/@@download/ENCFF465UUK.bed.gz GRCh38 released missing unfiltered alignments ENCFF358DZO bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF774RUP, ENCFF780MVW 7090603 ENCODE Processing Pipeline 381401889a95ca93e2cb2d9b36fe45c2 https://www.encodeproject.org/files/ENCFF358DZO/@@download/ENCFF358DZO.bed.gz GRCh38 released missing unfiltered alignments ENCFF142JBX bed narrowPeak conservative idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF358DZO, ENCFF360VMU, ENCFF419RSJ, ENCFF465UUK 785453 ENCODE Processing Pipeline e57eba8feec67bda3cc33301d2309710 https://www.encodeproject.org/files/ENCFF142JBX/@@download/ENCFF142JBX.bed.gz GRCh38 released missing unfiltered alignments ENCFF360VMU bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF780MVW, ENCFF892LAS 7143006 ENCODE Processing Pipeline ebbd9b80b1f89bd1467c700a2e1c4928 https://www.encodeproject.org/files/ENCFF360VMU/@@download/ENCFF360VMU.bed.gz GRCh38 released missing unfiltered alignments ENCFF236XAZ bed narrowPeak optimal idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF358DZO, ENCFF360VMU, ENCFF419RSJ, ENCFF465UUK 837317 ENCODE Processing Pipeline a2c7a380e59e2af725332014de4ffe83 https://www.encodeproject.org/files/ENCFF236XAZ/@@download/ENCFF236XAZ.bed.gz GRCh38 released missing unfiltered alignments ENCFF884CMO bed narrowPeak conservative idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF077HXE, ENCFF234YBT, ENCFF621JGB 794386 ENCODE Processing Pipeline e5bf0fc333d9d3474291eda0297be8bb https://www.encodeproject.org/files/ENCFF884CMO/@@download/ENCFF884CMO.bed.gz hg19 released missing unfiltered alignments ENCFF234YBT bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF465GPJ, ENCFF774NMX 7114931 ENCODE Processing Pipeline 79d418b70086dce5c7e765c1e2642f73 https://www.encodeproject.org/files/ENCFF234YBT/@@download/ENCFF234YBT.bed.gz hg19 released missing unfiltered alignments ENCFF621JGB bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF774NMX, ENCFF800DAY 7098197 ENCODE Processing Pipeline 1ba4b01a7a46ffd49b60d3c82a7a8f57 https://www.encodeproject.org/files/ENCFF621JGB/@@download/ENCFF621JGB.bed.gz hg19 released missing unfiltered alignments ENCFF232KAH bed narrowPeak optimal idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF077HXE, ENCFF234YBT, ENCFF621JGB 847500 ENCODE Processing Pipeline c7510df2956ffb6634c5f8adaa79d8ec https://www.encodeproject.org/files/ENCFF232KAH/@@download/ENCFF232KAH.bed.gz hg19 released missing unfiltered alignments ENCFF077HXE bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF465GPJ, ENCFF774NMX, ENCFF800DAY 7263586 ENCODE Processing Pipeline 649e7a6167a0693ae434010d6aea2ae9 https://www.encodeproject.org/files/ENCFF077HXE/@@download/ENCFF077HXE.bed.gz hg19 released missing unfiltered alignments ENCFF001VCS bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 765836 Peggy Farnham, USC 5435877535fbb8304b8d1651841b3e96 https://www.encodeproject.org/files/ENCFF001VCS/@@download/ENCFF001VCS.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF644XWD bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF051ZZR, ENCFF576SWI, ENCFF606ADT 2862230 ENCODE Processing Pipeline 3f2dfcfc4c57b8bb30f76f56bef245d4 https://www.encodeproject.org/files/ENCFF644XWD/@@download/ENCFF644XWD.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF295AER bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1 ENCFF051ZZR, ENCFF576SWI 2754989 ENCODE Processing Pipeline 0c3c1b11ba9ca504ebf37e6a96b61a92 https://www.encodeproject.org/files/ENCFF295AER/@@download/ENCFF295AER.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF043ACH bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 2 ENCFF051ZZR, ENCFF606ADT 4446774 ENCODE Processing Pipeline ec8d24d3a0868e13482a1a1ae8fda281 https://www.encodeproject.org/files/ENCFF043ACH/@@download/ENCFF043ACH.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF695JMF bed narrowPeak replicated peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF043ACH, ENCFF295AER, ENCFF644XWD 3027607 ENCODE Processing Pipeline a35e1079bf74cfd5bb2915272c9c473f https://www.encodeproject.org/files/ENCFF695JMF/@@download/ENCFF695JMF.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF631OTW bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1 ENCFF159SIY, ENCFF355SGP 2753060 ENCODE Processing Pipeline f75deb09be53e39f71edb8b3ee72ea75 https://www.encodeproject.org/files/ENCFF631OTW/@@download/ENCFF631OTW.bed.gz GRCh38 archived low read depth, low read length biological replicates with identical biosample ENCFF187KBC bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 2 ENCFF355SGP, ENCFF869PBP 4483638 ENCODE Processing Pipeline 0ef5095cb4a50951c05e87eec03ff01b https://www.encodeproject.org/files/ENCFF187KBC/@@download/ENCFF187KBC.bed.gz GRCh38 archived low read depth, low read length biological replicates with identical biosample ENCFF200VCY bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF159SIY, ENCFF355SGP, ENCFF869PBP 2852382 ENCODE Processing Pipeline bd6981a5b8c6027b186a7b6e335892dc https://www.encodeproject.org/files/ENCFF200VCY/@@download/ENCFF200VCY.bed.gz GRCh38 archived low read depth, low read length biological replicates with identical biosample ENCFF667VWL bed narrowPeak replicated peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF187KBC, ENCFF200VCY, ENCFF631OTW 2996457 ENCODE Processing Pipeline c10923437e7aafc913866d0ba8966f20 https://www.encodeproject.org/files/ENCFF667VWL/@@download/ENCFF667VWL.bed.gz GRCh38 archived low read depth, low read length biological replicates with identical biosample ENCFF854AMS bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF236CJR, ENCFF355SGP, ENCFF763ZGN 3029145 ENCODE Processing Pipeline 23e5ae0c780d7812d85b49de80f5a8f3 https://www.encodeproject.org/files/ENCFF854AMS/@@download/ENCFF854AMS.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF184IVL bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1 ENCFF051ZZR, ENCFF204DNG 2844125 ENCODE Processing Pipeline 5112fb14376ac3f54bfeb4247c6f2dd2 https://www.encodeproject.org/files/ENCFF184IVL/@@download/ENCFF184IVL.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF890RCT bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 2 ENCFF032SBV, ENCFF051ZZR 4545003 ENCODE Processing Pipeline aba7b1d4eb4acacd7744444929f5f103 https://www.encodeproject.org/files/ENCFF890RCT/@@download/ENCFF890RCT.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF684ZDW bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 2 ENCFF236CJR, ENCFF355SGP 4501248 ENCODE Processing Pipeline c154b15aa534bbf1e3b9961f3c681d00 https://www.encodeproject.org/files/ENCFF684ZDW/@@download/ENCFF684ZDW.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF983QJG bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1 ENCFF355SGP, ENCFF763ZGN 2798709 ENCODE Processing Pipeline c1a6b21f5f710b3c05a5d25bd408fa6e https://www.encodeproject.org/files/ENCFF983QJG/@@download/ENCFF983QJG.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF085JHT bed narrowPeak replicated peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF184IVL, ENCFF641AGA, ENCFF890RCT 3111160 ENCODE Processing Pipeline 5b5a4a7be89d9cb361338ca4d67a5806 https://www.encodeproject.org/files/ENCFF085JHT/@@download/ENCFF085JHT.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF641AGA bed narrowPeak peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF032SBV, ENCFF051ZZR, ENCFF204DNG 3060914 ENCODE Processing Pipeline 51347449793df837e6b80b8cecc4f50a https://www.encodeproject.org/files/ENCFF641AGA/@@download/ENCFF641AGA.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF558JOB bed narrowPeak replicated peaks ENCSR000EVZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9ac-human ENCAB000ANO DNA see document see document False 2011-05-19 ENCODE 1, 2 ENCFF684ZDW, ENCFF854AMS, ENCFF983QJG 3062775 ENCODE Processing Pipeline 64087477ee672519086252bd725b4291 https://www.encodeproject.org/files/ENCFF558JOB/@@download/ENCFF558JOB.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF836JVP bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF549MBS, ENCFF712WXB 5999010 ENCODE Processing Pipeline 249ca7c1a1dcff6534966d47c89fb73f https://www.encodeproject.org/files/ENCFF836JVP/@@download/ENCFF836JVP.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF239JIE bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF008CUX, ENCFF790TAN 5865333 ENCODE Processing Pipeline da0fa3d73529c424e09c5abf56b6b4f0 https://www.encodeproject.org/files/ENCFF239JIE/@@download/ENCFF239JIE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF715XCG bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF008CUX, ENCFF549MBS, ENCFF712WXB, ENCFF790TAN 6963216 ENCODE Processing Pipeline f44c4dc6dd551b9a0f588fc918dd8e81 https://www.encodeproject.org/files/ENCFF715XCG/@@download/ENCFF715XCG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF270PLW bed narrowPeak conservative idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF239JIE, ENCFF419RSJ, ENCFF715XCG, ENCFF836JVP 163058 ENCODE Processing Pipeline 8ad8a6b225ba8f9685198c544907104a https://www.encodeproject.org/files/ENCFF270PLW/@@download/ENCFF270PLW.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF515YFU bed narrowPeak optimal idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF239JIE, ENCFF419RSJ, ENCFF715XCG, ENCFF836JVP 239443 ENCODE Processing Pipeline 8752a1dbef9a6536bb34bc31cad123b3 https://www.encodeproject.org/files/ENCFF515YFU/@@download/ENCFF515YFU.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF433ZFX bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF082MPF, ENCFF834TUP 5891678 ENCODE Processing Pipeline 682e9aba849cd0eeaa24e1017405ec66 https://www.encodeproject.org/files/ENCFF433ZFX/@@download/ENCFF433ZFX.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF784OAB bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF160VXC, ENCFF839XNR 5864789 ENCODE Processing Pipeline 956d30c471c2d20a4afb3582b7d39e7d https://www.encodeproject.org/files/ENCFF784OAB/@@download/ENCFF784OAB.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF324CAZ bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF082MPF, ENCFF160VXC, ENCFF834TUP, ENCFF839XNR 6957977 ENCODE Processing Pipeline 8e14f0003fe0863336bead67e79c33be https://www.encodeproject.org/files/ENCFF324CAZ/@@download/ENCFF324CAZ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF591UOR bed narrowPeak conservative idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF001TDO, ENCFF324CAZ, ENCFF433ZFX, ENCFF784OAB 162311 ENCODE Processing Pipeline a8bba108801e3d5d8a4d273aa09208db https://www.encodeproject.org/files/ENCFF591UOR/@@download/ENCFF591UOR.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF776YPS bed narrowPeak optimal idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF001TDO, ENCFF324CAZ, ENCFF433ZFX, ENCFF784OAB 232581 ENCODE Processing Pipeline 5c0614ca3f5ea89ffbd81ad107a5c28e https://www.encodeproject.org/files/ENCFF776YPS/@@download/ENCFF776YPS.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO ENCFF002CLN bed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 312249 ENCODE Consortium Analysis Working Group d1af167591078c356c4ff1f625297619 https://www.encodeproject.org/files/ENCFF002CLN/@@download/ENCFF002CLN.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample ENCFF650KQD bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308RGN, ENCFF438DHS, ENCFF772PJM 5153728 ENCODE Processing Pipeline 7f5b53d2cccfd07ff26ce65cdd16f86a https://www.encodeproject.org/files/ENCFF650KQD/@@download/ENCFF650KQD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF980RKS bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308RGN, ENCFF772PJM 4304832 ENCODE Processing Pipeline 3801d07b163dae30363e2fb2af8a73e3 https://www.encodeproject.org/files/ENCFF980RKS/@@download/ENCFF980RKS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF364WAT bed narrowPeak conservative idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF145FYQ, ENCFF419RSJ, ENCFF650KQD, ENCFF980RKS 7082 ENCODE Processing Pipeline 43434f95dab24f3f53d2e33b299e6116 https://www.encodeproject.org/files/ENCFF364WAT/@@download/ENCFF364WAT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF145FYQ bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438DHS, ENCFF772PJM 934563 ENCODE Processing Pipeline a1f72cc6c4bbbf5378d73c25d6760d80 https://www.encodeproject.org/files/ENCFF145FYQ/@@download/ENCFF145FYQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF467WOR bed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF145FYQ, ENCFF419RSJ, ENCFF650KQD, ENCFF980RKS 131560 ENCODE Processing Pipeline 0eea4ec13ed728c59950c45219d7f880 https://www.encodeproject.org/files/ENCFF467WOR/@@download/ENCFF467WOR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample ENCFF001VNC bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 39459 Peggy Farnham, USC 0e1575e9d786484b0ea7761c0ce167c6 https://www.encodeproject.org/files/ENCFF001VNC/@@download/ENCFF001VNC.bed.gz hg19 archived borderline replicate concordance inconsistent mapped reads lengths, missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CWP bed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 80803 ENCODE Consortium Analysis Working Group cd1050d97484e1762c9332c2fe2467ac https://www.encodeproject.org/files/ENCFF002CWP/@@download/ENCFF002CWP.bed.gz hg19 archived borderline replicate concordance inconsistent mapped reads lengths, missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF484BSF bed narrowPeak conservative idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF226NEO, ENCFF419RSJ, ENCFF788ZKH, ENCFF868CAQ 49216 ENCODE Processing Pipeline 1ea7dc96438af4d51a29151a5a889fc2 https://www.encodeproject.org/files/ENCFF484BSF/@@download/ENCFF484BSF.bed.gz GRCh38 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF659WGE bed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF281ONW, ENCFF830VFD, ENCFF942MUF 69686 ENCODE Processing Pipeline 1173386ed1cdefa8840fec380d4ffbde https://www.encodeproject.org/files/ENCFF659WGE/@@download/ENCFF659WGE.bed.gz hg19 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF226NEO bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF642RHD, ENCFF788ICY 4240372 ENCODE Processing Pipeline faa9a2be4be03d9e8efbd10e32e49d36 https://www.encodeproject.org/files/ENCFF226NEO/@@download/ENCFF226NEO.bed.gz GRCh38 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF715NLX bed narrowPeak conservative idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF281ONW, ENCFF830VFD, ENCFF942MUF 49036 ENCODE Processing Pipeline 376b527bc099c180f65bec7fb4ae1352 https://www.encodeproject.org/files/ENCFF715NLX/@@download/ENCFF715NLX.bed.gz hg19 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF576YJD bed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF226NEO, ENCFF419RSJ, ENCFF788ZKH, ENCFF868CAQ 71091 ENCODE Processing Pipeline 0e027d8aeed6a6ee8da9d4e88cf23ab4 https://www.encodeproject.org/files/ENCFF576YJD/@@download/ENCFF576YJD.bed.gz GRCh38 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF281ONW bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF461UBM 1358195 ENCODE Processing Pipeline 99965bf4d8aaec0d25e61565757d4476 https://www.encodeproject.org/files/ENCFF281ONW/@@download/ENCFF281ONW.bed.gz hg19 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF942MUF bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF465DSP 3449310 ENCODE Processing Pipeline c6502e4f08098ed2b9766c2dfff6b5c2 https://www.encodeproject.org/files/ENCFF942MUF/@@download/ENCFF942MUF.bed.gz hg19 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF830VFD bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF461UBM, ENCFF465DSP 4532459 ENCODE Processing Pipeline 9978ba134c5d3cb344a45f38e35ec117 https://www.encodeproject.org/files/ENCFF830VFD/@@download/ENCFF830VFD.bed.gz hg19 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF788ZKH bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF788ICY 3392356 ENCODE Processing Pipeline 3993f1f084d6b9982cf3e2402ca607c9 https://www.encodeproject.org/files/ENCFF788ZKH/@@download/ENCFF788ZKH.bed.gz GRCh38 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF868CAQ bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF642RHD 1281589 ENCODE Processing Pipeline 33cefd5294d7a53c2b52b847bc25548a https://www.encodeproject.org/files/ENCFF868CAQ/@@download/ENCFF868CAQ.bed.gz GRCh38 released borderline replicate concordance inconsistent mapped reads lengths, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF357VCS bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF187NQM, ENCFF267TAG 7293894 ENCODE Processing Pipeline 518350f213fd7e62dcdac573752d7de7 https://www.encodeproject.org/files/ENCFF357VCS/@@download/ENCFF357VCS.bed.gz hg19 released missing unfiltered alignments ENCFF530EDL bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF267TAG, ENCFF512JPN 7255330 ENCODE Processing Pipeline 6633f9702b47a79ee6cd79f14b0037b6 https://www.encodeproject.org/files/ENCFF530EDL/@@download/ENCFF530EDL.bed.gz hg19 released missing unfiltered alignments ENCFF188IJE bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF187NQM, ENCFF267TAG, ENCFF512JPN 7382572 ENCODE Processing Pipeline d7a9ee4b6cd62d3ecdfb0efc045880bd https://www.encodeproject.org/files/ENCFF188IJE/@@download/ENCFF188IJE.bed.gz hg19 released missing unfiltered alignments ENCFF617CTX bed narrowPeak conservative idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF188IJE, ENCFF357VCS, ENCFF530EDL 399859 ENCODE Processing Pipeline 4ebf8b06f0559b86426be620d5035f64 https://www.encodeproject.org/files/ENCFF617CTX/@@download/ENCFF617CTX.bed.gz hg19 released missing unfiltered alignments ENCFF447QUG bed narrowPeak optimal idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF188IJE, ENCFF357VCS, ENCFF530EDL 434983 ENCODE Processing Pipeline dccf07316b700c70e29bc268987e06b7 https://www.encodeproject.org/files/ENCFF447QUG/@@download/ENCFF447QUG.bed.gz hg19 released missing unfiltered alignments ENCFF641OLH bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF300AUR, ENCFF752BZZ, ENCFF996AFH 7391955 ENCODE Processing Pipeline ea535c3abe68c6feaba73c05f7a00e36 https://www.encodeproject.org/files/ENCFF641OLH/@@download/ENCFF641OLH.bed.gz GRCh38 released missing unfiltered alignments ENCFF521LOL bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF300AUR, ENCFF752BZZ 7251978 ENCODE Processing Pipeline 383c6e878ccec7b358f50069511bda8a https://www.encodeproject.org/files/ENCFF521LOL/@@download/ENCFF521LOL.bed.gz GRCh38 released missing unfiltered alignments ENCFF239NNB bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF752BZZ, ENCFF996AFH 7323908 ENCODE Processing Pipeline 2265d973a36e20077bfb27a294168d9c https://www.encodeproject.org/files/ENCFF239NNB/@@download/ENCFF239NNB.bed.gz GRCh38 released missing unfiltered alignments ENCFF558SDJ bed narrowPeak conservative idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF239NNB, ENCFF419RSJ, ENCFF521LOL, ENCFF641OLH 405121 ENCODE Processing Pipeline 0c6e95c472c512800fe287ed46a5c9c2 https://www.encodeproject.org/files/ENCFF558SDJ/@@download/ENCFF558SDJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF825ZIU bed narrowPeak optimal idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF239NNB, ENCFF419RSJ, ENCFF521LOL, ENCFF641OLH 431257 ENCODE Processing Pipeline 4ab70d959a8e6194fb15b79f10ce6026 https://www.encodeproject.org/files/ENCFF825ZIU/@@download/ENCFF825ZIU.bed.gz GRCh38 released missing unfiltered alignments ENCFF255VCC bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF262CJE, ENCFF317UJS, ENCFF506DFV 6398990 ENCODE Processing Pipeline 7344145cc93f4211f897581fcc9e10b5 https://www.encodeproject.org/files/ENCFF255VCC/@@download/ENCFF255VCC.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF637AOG bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF262CJE, ENCFF317UJS, ENCFF506DFV, ENCFF798EEI 7098911 ENCODE Processing Pipeline caba2045016146600bf29e2bf717b043 https://www.encodeproject.org/files/ENCFF637AOG/@@download/ENCFF637AOG.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF630ANY bed narrowPeak conservative idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF255VCC, ENCFF637AOG, ENCFF782FAJ 577972 ENCODE Processing Pipeline 3a4fb10afba9a22ae5d5997086f825d4 https://www.encodeproject.org/files/ENCFF630ANY/@@download/ENCFF630ANY.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF782FAJ bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF798EEI 6792822 ENCODE Processing Pipeline 7f92a2c22d03cbc0d8ef279014a1724a https://www.encodeproject.org/files/ENCFF782FAJ/@@download/ENCFF782FAJ.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF558JBX bed narrowPeak optimal idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF255VCC, ENCFF637AOG, ENCFF782FAJ 605717 ENCODE Processing Pipeline 8149a5a796a465fc5a678edf965522ce https://www.encodeproject.org/files/ENCFF558JBX/@@download/ENCFF558JBX.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF814LDV bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF528YNP, ENCFF720AUK, ENCFF796JTX 6797464 ENCODE Processing Pipeline 506d16629923a10009f1025d9de08fbc https://www.encodeproject.org/files/ENCFF814LDV/@@download/ENCFF814LDV.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF376ISK bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF431IVA, ENCFF720AUK, ENCFF796JTX 6400103 ENCODE Processing Pipeline 68123bed7a4e5bc437fe0b53ae291606 https://www.encodeproject.org/files/ENCFF376ISK/@@download/ENCFF376ISK.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF878QFY bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF431IVA, ENCFF528YNP, ENCFF720AUK, ENCFF796JTX 7106807 ENCODE Processing Pipeline a2422f8956f895a40bb184909b115d9e https://www.encodeproject.org/files/ENCFF878QFY/@@download/ENCFF878QFY.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF175VSS bed narrowPeak optimal idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF376ISK, ENCFF419RSJ, ENCFF814LDV, ENCFF878QFY 612592 ENCODE Processing Pipeline 03ac720f9a6b30e8673da2c16d9bcc3f https://www.encodeproject.org/files/ENCFF175VSS/@@download/ENCFF175VSS.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF522KCK bed narrowPeak conservative idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF376ISK, ENCFF419RSJ, ENCFF814LDV, ENCFF878QFY 578663 ENCODE Processing Pipeline 65318674069e4073deeaa02b3ea1c265 https://www.encodeproject.org/files/ENCFF522KCK/@@download/ENCFF522KCK.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF002CML bed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 289014 ENCODE Consortium Analysis Working Group bda8755d57b4e4a73c98bd34c38c2fe1 https://www.encodeproject.org/files/ENCFF002CML/@@download/ENCFF002CML.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF643PFS bed narrowPeak conservative idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF628XGA, ENCFF740XTI, ENCFF966MTK 12457 ENCODE Processing Pipeline 8d04c895e8b5b66b9d80aae8eea917f7 https://www.encodeproject.org/files/ENCFF643PFS/@@download/ENCFF643PFS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient replicate concordance ENCFF740XTI bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334QAB, ENCFF772PJM 4403214 ENCODE Processing Pipeline 74fbc7e9392c031558a90301479c9a20 https://www.encodeproject.org/files/ENCFF740XTI/@@download/ENCFF740XTI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient replicate concordance ENCFF628XGA bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF329LWM, ENCFF772PJM 89962 ENCODE Processing Pipeline e355484f1860478019b7368c7c5c6d76 https://www.encodeproject.org/files/ENCFF628XGA/@@download/ENCFF628XGA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient replicate concordance ENCFF407VGB bed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF628XGA, ENCFF740XTI, ENCFF966MTK 35624 ENCODE Processing Pipeline 65f6f45f8f01ff27847c8d1f175cddb6 https://www.encodeproject.org/files/ENCFF407VGB/@@download/ENCFF407VGB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient replicate concordance ENCFF966MTK bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF329LWM, ENCFF334QAB, ENCFF772PJM 4833456 ENCODE Processing Pipeline daa8283138c35cb43f1d943295216391 https://www.encodeproject.org/files/ENCFF966MTK/@@download/ENCFF966MTK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient replicate concordance ENCFF374ISV bed narrowPeak peaks ENCSR000AKW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me1-human ENCAB000ANP DNA see document see document False 2011-02-10 ENCODE 1 ENCFF442DIM, ENCFF574XYY 249604 ENCODE Processing Pipeline ad74a77515cbfda2059e4f01bded5dc4 https://www.encodeproject.org/files/ENCFF374ISV/@@download/ENCFF374ISV.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, low read length insufficient read depth ENCFF092WJN bed narrowPeak peaks ENCSR000AKW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me1-human ENCAB000ANP DNA see document see document False 2011-02-10 ENCODE 1 ENCFF108HZT, ENCFF392XRJ 250490 ENCODE Processing Pipeline adcf09eaaccf80670aee24f09b69517c https://www.encodeproject.org/files/ENCFF092WJN/@@download/ENCFF092WJN.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read length insufficient read depth ENCFF652WML bed narrowPeak stable peaks ENCSR000AKW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me1-human ENCAB000ANP DNA see document see document False 2011-02-10 ENCODE 1 ENCFF374ISV 81241 ENCODE Processing Pipeline 1020f26465c89ef31ba475b5db05982b https://www.encodeproject.org/files/ENCFF652WML/@@download/ENCFF652WML.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, low read length insufficient read depth ENCFF285EKW bed narrowPeak stable peaks ENCSR000AKW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K9me1-human ENCAB000ANP DNA see document see document False 2011-02-10 ENCODE 1 ENCFF092WJN 81850 ENCODE Processing Pipeline 50051f7d801355fac8f8c31ae27d74ca https://www.encodeproject.org/files/ENCFF285EKW/@@download/ENCFF285EKW.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read length insufficient read depth ENCFF729PYU bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF092OEQ, ENCFF203MUO, ENCFF936VXD 5373720 ENCODE Processing Pipeline 3d415db4b3d62259eae684baa975101b https://www.encodeproject.org/files/ENCFF729PYU/@@download/ENCFF729PYU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF234GXW bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF092OEQ, ENCFF618MHM, ENCFF936VXD 5517711 ENCODE Processing Pipeline b15a8c1be18d7adab65e7c964409d99b https://www.encodeproject.org/files/ENCFF234GXW/@@download/ENCFF234GXW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF180ORT bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF092OEQ, ENCFF203MUO, ENCFF618MHM, ENCFF936VXD 6517254 ENCODE Processing Pipeline f3a997d89cbbbc378eaf5e58d124dcd9 https://www.encodeproject.org/files/ENCFF180ORT/@@download/ENCFF180ORT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF823CQK bed narrowPeak optimal idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF180ORT, ENCFF234GXW, ENCFF419RSJ, ENCFF729PYU 96411 ENCODE Processing Pipeline 23a93e1a57c7dd694ed44cfa4c5e72c1 https://www.encodeproject.org/files/ENCFF823CQK/@@download/ENCFF823CQK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF426IHW bed narrowPeak conservative idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF180ORT, ENCFF234GXW, ENCFF419RSJ, ENCFF729PYU 93604 ENCODE Processing Pipeline 38988106db508f9fe7709ca9439e9657 https://www.encodeproject.org/files/ENCFF426IHW/@@download/ENCFF426IHW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF609LOZ bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF413LCN, ENCFF466LEC, ENCFF913GCP 5522784 ENCODE Processing Pipeline 90f8e7d8022f73e44109afeff47bf187 https://www.encodeproject.org/files/ENCFF609LOZ/@@download/ENCFF609LOZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF028TZK bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF413LCN, ENCFF466LEC, ENCFF913GCP, ENCFF984PYA 6537634 ENCODE Processing Pipeline 93dc2328c6392cb99f4502781d628657 https://www.encodeproject.org/files/ENCFF028TZK/@@download/ENCFF028TZK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF219YST bed narrowPeak conservative idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF028TZK, ENCFF609LOZ, ENCFF882WGE 83629 ENCODE Processing Pipeline f744641641fba917b771b772cfb98d2a https://www.encodeproject.org/files/ENCFF219YST/@@download/ENCFF219YST.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF134NMW bed narrowPeak optimal idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF028TZK, ENCFF609LOZ, ENCFF882WGE 90103 ENCODE Processing Pipeline e27dcf77f1ba6a47765799b317b359ae https://www.encodeproject.org/files/ENCFF134NMW/@@download/ENCFF134NMW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF882WGE bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF413LCN, ENCFF466LEC, ENCFF984PYA 5668214 ENCODE Processing Pipeline bb6cceac098c9c18a285ddaac2ab0c6c https://www.encodeproject.org/files/ENCFF882WGE/@@download/ENCFF882WGE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length experiment not submitted to GEO, missing unfiltered alignments ENCFF001VNK bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 62876 Michael Snyder, Stanford 61e18337bdb14560478c340a0c5ff88f https://www.encodeproject.org/files/ENCFF001VNK/@@download/ENCFF001VNK.bed.gz hg19 archived low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, missing derived_from, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF002CWV bed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 35503 ENCODE Consortium Analysis Working Group fde2ede3ff6eb70e03a7d29c4f98aa0f https://www.encodeproject.org/files/ENCFF002CWV/@@download/ENCFF002CWV.bed.gz hg19 archived low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, missing derived_from, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF388APV bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF650MOB, ENCFF987HMV 1312157 ENCODE Processing Pipeline f850cd4b994e33bba8b5627575764c19 https://www.encodeproject.org/files/ENCFF388APV/@@download/ENCFF388APV.bed.gz hg19 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF347YQN bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF650MOB, ENCFF703RUQ, ENCFF987HMV 3968756 ENCODE Processing Pipeline 3c22de99e7db2be008aa5d0405c85d19 https://www.encodeproject.org/files/ENCFF347YQN/@@download/ENCFF347YQN.bed.gz hg19 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF256GYM bed narrowPeak conservative idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF219ASD, ENCFF467GRI, ENCFF879FJY 17204 ENCODE Processing Pipeline 819dd02b5e1b17baf83f4d5b80316bc8 https://www.encodeproject.org/files/ENCFF256GYM/@@download/ENCFF256GYM.bed.gz hg19 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched status, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF467GRI bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF703RUQ 3615122 ENCODE Processing Pipeline dc0cfa0a67c7c5b32f08bf16d2422fc9 https://www.encodeproject.org/files/ENCFF467GRI/@@download/ENCFF467GRI.bed.gz hg19 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF730RUF bed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF219ASD, ENCFF467GRI, ENCFF879FJY 28306 ENCODE Processing Pipeline a6f5b7194e601a38cffb1e0c847da96c https://www.encodeproject.org/files/ENCFF730RUF/@@download/ENCFF730RUF.bed.gz hg19 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched status, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF396MDF bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF158ZVB, ENCFF218JFL, ENCFF764RUA 3933170 ENCODE Processing Pipeline 92c1bb08e5b15e52c899ca3cae1c133c https://www.encodeproject.org/files/ENCFF396MDF/@@download/ENCFF396MDF.bed.gz GRCh38 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched status, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF741BMU bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF158ZVB, ENCFF764RUA 3650330 ENCODE Processing Pipeline 2c4a54504f57310cf8de5277d31d1206 https://www.encodeproject.org/files/ENCFF741BMU/@@download/ENCFF741BMU.bed.gz GRCh38 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched status, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF692HFK bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF218JFL, ENCFF764RUA 1310790 ENCODE Processing Pipeline 2be2dfb16fedb831954651b5fdaf10e1 https://www.encodeproject.org/files/ENCFF692HFK/@@download/ENCFF692HFK.bed.gz GRCh38 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched status, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF376GBG bed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF396MDF, ENCFF419RSJ, ENCFF692HFK, ENCFF741BMU 30021 ENCODE Processing Pipeline b1c29a09dcd386a43bfc394593d0e083 https://www.encodeproject.org/files/ENCFF376GBG/@@download/ENCFF376GBG.bed.gz GRCh38 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF947GWG bed narrowPeak conservative idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF396MDF, ENCFF419RSJ, ENCFF692HFK, ENCFF741BMU 17584 ENCODE Processing Pipeline f21a2e8b38b1201619c32187312846df https://www.encodeproject.org/files/ENCFF947GWG/@@download/ENCFF947GWG.bed.gz GRCh38 released low read depth, mixed read lengths, borderline replicate concordance, low read length inconsistent mapped reads lengths, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF001VOD bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 184328 Sherman Weissman, Yale d0fcc2fae7c18772508d2e9676a411ea https://www.encodeproject.org/files/ENCFF001VOD/@@download/ENCFF001VOD.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CXM bed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 277358 ENCODE Consortium Analysis Working Group cb46bdb294329aff6896b6c0f804bbc7 https://www.encodeproject.org/files/ENCFF002CXM/@@download/ENCFF002CXM.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF573ZMO bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF466HUV, ENCFF650MOB 3850971 ENCODE Processing Pipeline 74c008bd757c6d578f4dcedfc1637ff4 https://www.encodeproject.org/files/ENCFF573ZMO/@@download/ENCFF573ZMO.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF368DTT bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF454MRU, ENCFF650MOB 5165500 ENCODE Processing Pipeline b2516f78e2380fda0832e66adb41f82f https://www.encodeproject.org/files/ENCFF368DTT/@@download/ENCFF368DTT.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF502ZBE bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF454MRU, ENCFF466HUV, ENCFF650MOB 5928682 ENCODE Processing Pipeline f5efc8a924b03586579828582a373ff3 https://www.encodeproject.org/files/ENCFF502ZBE/@@download/ENCFF502ZBE.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF957KTN bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF323MTY, ENCFF767FSP 3593607 ENCODE Processing Pipeline 5084d6b0a1bfb45803a0a4d4829ea7cd https://www.encodeproject.org/files/ENCFF957KTN/@@download/ENCFF957KTN.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF649AEV bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF767FSP, ENCFF976EMR 5249812 ENCODE Processing Pipeline 4efad11cc85307d87ca817b956ebfbe0 https://www.encodeproject.org/files/ENCFF649AEV/@@download/ENCFF649AEV.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF842HZT bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF323MTY, ENCFF767FSP, ENCFF976EMR 5926687 ENCODE Processing Pipeline 3996d5273c51c5a1700409a65e21dccf https://www.encodeproject.org/files/ENCFF842HZT/@@download/ENCFF842HZT.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF772UWM bed narrowPeak conservative idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF368DTT, ENCFF502ZBE, ENCFF573ZMO 306209 ENCODE Processing Pipeline f3d4a2bbb85e48cf99a78773a346516e https://www.encodeproject.org/files/ENCFF772UWM/@@download/ENCFF772UWM.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF662YQK bed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF368DTT, ENCFF502ZBE, ENCFF573ZMO 329502 ENCODE Processing Pipeline f8f090e562e1e4b21badd0f06731c1e1 https://www.encodeproject.org/files/ENCFF662YQK/@@download/ENCFF662YQK.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF432VIV bed narrowPeak conservative idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF649AEV, ENCFF842HZT, ENCFF957KTN 306724 ENCODE Processing Pipeline 901f746eee80e464cd6b31b9e41ce2f7 https://www.encodeproject.org/files/ENCFF432VIV/@@download/ENCFF432VIV.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF668VIK bed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF649AEV, ENCFF842HZT, ENCFF957KTN 327240 ENCODE Processing Pipeline 9da46723e82c01d8cac75af9b1c42054 https://www.encodeproject.org/files/ENCFF668VIK/@@download/ENCFF668VIK.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF721YQO bed narrowPeak peaks ENCSR000AKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ADW DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF213ZYR, ENCFF574XYY, ENCFF798WDB 2437367 ENCODE Processing Pipeline 3cab90dfb0280b643b2454f6f5c5ca76 https://www.encodeproject.org/files/ENCFF721YQO/@@download/ENCFF721YQO.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF586SUS bed narrowPeak peaks ENCSR000AKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ADW DNA see document see document False 2011-02-10 ENCODE 2 ENCFF574XYY, ENCFF798WDB 2327933 ENCODE Processing Pipeline bf7480ee8cd0eda31545c5d6a3f75db9 https://www.encodeproject.org/files/ENCFF586SUS/@@download/ENCFF586SUS.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF254UHS bed narrowPeak peaks ENCSR000AKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ADW DNA see document see document False 2011-02-10 ENCODE 1 ENCFF213ZYR, ENCFF574XYY 3466200 ENCODE Processing Pipeline 22a6d507643fa6e775d400c929340e7c https://www.encodeproject.org/files/ENCFF254UHS/@@download/ENCFF254UHS.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF183UQD bed narrowPeak replicated peaks ENCSR000AKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me1-human ENCAB000ADW DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF254UHS, ENCFF586SUS, ENCFF721YQO 2480493 ENCODE Processing Pipeline 2ccaa58f988746392272a2c1d72e6852 https://www.encodeproject.org/files/ENCFF183UQD/@@download/ENCFF183UQD.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF034XAT bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF797FVU 6735210 ENCODE Processing Pipeline e6fb8b79b33ac42e1687fc8c2a64c085 https://www.encodeproject.org/files/ENCFF034XAT/@@download/ENCFF034XAT.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF678AVD bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF202BLM 6599752 ENCODE Processing Pipeline 43f8386b9e079217d0528038eb0f08c5 https://www.encodeproject.org/files/ENCFF678AVD/@@download/ENCFF678AVD.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF079HTI bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF202BLM, ENCFF797FVU 7021816 ENCODE Processing Pipeline 05284c0723c4ea830f572b6823a293ca https://www.encodeproject.org/files/ENCFF079HTI/@@download/ENCFF079HTI.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF912CZG bed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF034XAT, ENCFF079HTI, ENCFF419RSJ, ENCFF678AVD 425372 ENCODE Processing Pipeline 066774c1505a15379be88e6cea295b07 https://www.encodeproject.org/files/ENCFF912CZG/@@download/ENCFF912CZG.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF718DFX bed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF034XAT, ENCFF079HTI, ENCFF419RSJ, ENCFF678AVD 513563 ENCODE Processing Pipeline bd4007ae01d0f255d400fec344b2c2e9 https://www.encodeproject.org/files/ENCFF718DFX/@@download/ENCFF718DFX.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF037FVZ bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 7031469 ENCODE Processing Pipeline feb220c189b97d59af29b24ea583b4fe https://www.encodeproject.org/files/ENCFF037FVZ/@@download/ENCFF037FVZ.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF052IOC bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 6746160 ENCODE Processing Pipeline bd04ead3bc991eac41605e6d188659e2 https://www.encodeproject.org/files/ENCFF052IOC/@@download/ENCFF052IOC.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF514IDT bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD 6597708 ENCODE Processing Pipeline a21edc00eb3fd7ccf328b299898d43ae https://www.encodeproject.org/files/ENCFF514IDT/@@download/ENCFF514IDT.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF829KBM bed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF037FVZ, ENCFF052IOC, ENCFF514IDT 425262 ENCODE Processing Pipeline 37a322022254c65d6e7c7f996f3dd4ff https://www.encodeproject.org/files/ENCFF829KBM/@@download/ENCFF829KBM.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF558DSF bed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF037FVZ, ENCFF052IOC, ENCFF514IDT 507490 ENCODE Processing Pipeline 082127ee84bc475cf8b8969343b39cd0 https://www.encodeproject.org/files/ENCFF558DSF/@@download/ENCFF558DSF.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF001VOS bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 6887 Sherman Weissman, Yale 3ee906e3f2b296a935a77fbe0cadbcd4 https://www.encodeproject.org/files/ENCFF001VOS/@@download/ENCFF001VOS.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYB bed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 40339 ENCODE Consortium Analysis Working Group 1718fd972f2325347a55591909f5d6da https://www.encodeproject.org/files/ENCFF002CYB/@@download/ENCFF002CYB.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF622FPS bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF465UCG, ENCFF650MOB, ENCFF764OHG 4185597 ENCODE Processing Pipeline cae15d972cebb57bdfb84f52d5b0076f https://www.encodeproject.org/files/ENCFF622FPS/@@download/ENCFF622FPS.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF695SDJ bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF764OHG 2226729 ENCODE Processing Pipeline e5fa53b68f9680bfff30fcb11a3997e2 https://www.encodeproject.org/files/ENCFF695SDJ/@@download/ENCFF695SDJ.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF490WRP bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF465UCG, ENCFF650MOB 2645766 ENCODE Processing Pipeline b4c91a9f9340d89c0975816c7cdab774 https://www.encodeproject.org/files/ENCFF490WRP/@@download/ENCFF490WRP.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF068CSN bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF403WNR, ENCFF463LMJ 4184621 ENCODE Processing Pipeline 7284864293e4e8004eac4fd81634ea18 https://www.encodeproject.org/files/ENCFF068CSN/@@download/ENCFF068CSN.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF595BKT bed narrowPeak conservative idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF490WRP, ENCFF622FPS, ENCFF695SDJ 18246 ENCODE Processing Pipeline abb69af55b20a7cbe28eb01eb54002a3 https://www.encodeproject.org/files/ENCFF595BKT/@@download/ENCFF595BKT.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF904TMD bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF403WNR 2221464 ENCODE Processing Pipeline 33e36cc30c30eb5cb3276dc9882d7824 https://www.encodeproject.org/files/ENCFF904TMD/@@download/ENCFF904TMD.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF920DKX bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF463LMJ 2635949 ENCODE Processing Pipeline 9bfc992fbbff0406222f1eb01565fe95 https://www.encodeproject.org/files/ENCFF920DKX/@@download/ENCFF920DKX.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF290HTJ bed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF490WRP, ENCFF622FPS, ENCFF695SDJ 25619 ENCODE Processing Pipeline a9aa20b61b6e61db5f4a49be039c6f10 https://www.encodeproject.org/files/ENCFF290HTJ/@@download/ENCFF290HTJ.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF181PHR bed narrowPeak conservative idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF068CSN, ENCFF419RSJ, ENCFF904TMD, ENCFF920DKX 18501 ENCODE Processing Pipeline 12e61019930f5ebf56452dcef5e1e09d https://www.encodeproject.org/files/ENCFF181PHR/@@download/ENCFF181PHR.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF646MXG bed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF068CSN, ENCFF419RSJ, ENCFF904TMD, ENCFF920DKX 26514 ENCODE Processing Pipeline f89b2c4ecdac0570b786a0bd15c3ad2d https://www.encodeproject.org/files/ENCFF646MXG/@@download/ENCFF646MXG.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CMG bed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 315726 ENCODE Consortium Analysis Working Group 1d1567ffccbd267df03c88c0b848fb7a https://www.encodeproject.org/files/ENCFF002CMG/@@download/ENCFF002CMG.bed.gz hg19 archived low read depth, inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF706GUM bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF491DUD 6268388 ENCODE Processing Pipeline 539ce4eb7c3b405d0b061c71a74b8bcb https://www.encodeproject.org/files/ENCFF706GUM/@@download/ENCFF706GUM.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length biological replicates with identical biosample ENCFF282KQX bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF112WHF 6526092 ENCODE Processing Pipeline 718f440292da58cd51b99a8121b7bf3d https://www.encodeproject.org/files/ENCFF282KQX/@@download/ENCFF282KQX.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length biological replicates with identical biosample ENCFF613YPH bed narrowPeak conservative idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF282KQX, ENCFF419RSJ, ENCFF706GUM, ENCFF970LID 301783 ENCODE Processing Pipeline c3ee9d8cb0d6c85dbde80b35e9a28ead https://www.encodeproject.org/files/ENCFF613YPH/@@download/ENCFF613YPH.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length biological replicates with identical biosample ENCFF800QDU bed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF282KQX, ENCFF419RSJ, ENCFF706GUM, ENCFF970LID 365755 ENCODE Processing Pipeline 6eec23a48cdde52ad1922299a27a72ad https://www.encodeproject.org/files/ENCFF800QDU/@@download/ENCFF800QDU.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length biological replicates with identical biosample ENCFF970LID bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF112WHF, ENCFF491DUD 6973318 ENCODE Processing Pipeline 5699a10f512ad737a3557ab65c6d76d4 https://www.encodeproject.org/files/ENCFF970LID/@@download/ENCFF970LID.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length biological replicates with identical biosample ENCFF267JLP bed narrowPeak peaks ENCSR000APC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H2AFZ-human ENCAB000ASY DNA see document see document False 2011-02-10 ENCODE 1 ENCFF392XRJ, ENCFF472XNE 2238336 ENCODE Processing Pipeline cdbf67c5aa4c3805056e029ba7e7bb85 https://www.encodeproject.org/files/ENCFF267JLP/@@download/ENCFF267JLP.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length ENCFF451NLT bed narrowPeak peaks ENCSR000APC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H2AFZ-human ENCAB000ASY DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF407AUC 2939538 ENCODE Processing Pipeline 580ee4d8fa6ad652a81c75333ba40cf5 https://www.encodeproject.org/files/ENCFF451NLT/@@download/ENCFF451NLT.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length ENCFF518XQA bed narrowPeak peaks ENCSR000APC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H2AFZ-human ENCAB000ASY DNA see document see document False 2011-02-10 ENCODE 1 ENCFF574XYY, ENCFF840EXN 2103035 ENCODE Processing Pipeline 14228cf4559bc30795b7977a219a1491 https://www.encodeproject.org/files/ENCFF518XQA/@@download/ENCFF518XQA.bed.gz hg19 released low read depth, inconsistent platforms, low read length ENCFF681OSA bed narrowPeak peaks ENCSR000APC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H2AFZ-human ENCAB000ASY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF289NOY, ENCFF574XYY, ENCFF840EXN 1897043 ENCODE Processing Pipeline 10361b39a1e32a28b0eaf369fb7cce0f https://www.encodeproject.org/files/ENCFF681OSA/@@download/ENCFF681OSA.bed.gz hg19 released low read depth, inconsistent platforms, low read length ENCFF422GBO bed narrowPeak peaks ENCSR000APC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H2AFZ-human ENCAB000ASY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF392XRJ, ENCFF407AUC, ENCFF472XNE 1976063 ENCODE Processing Pipeline 3693c3e22b60e92aee2dbaa98a3caf19 https://www.encodeproject.org/files/ENCFF422GBO/@@download/ENCFF422GBO.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length ENCFF809JDN bed narrowPeak peaks ENCSR000APC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H2AFZ-human ENCAB000ASY DNA see document see document False 2011-02-10 ENCODE 2 ENCFF289NOY, ENCFF574XYY 2875580 ENCODE Processing Pipeline 9edad36344ffa15c33fb530a240fd283 https://www.encodeproject.org/files/ENCFF809JDN/@@download/ENCFF809JDN.bed.gz hg19 released low read depth, inconsistent platforms, low read length ENCFF624XRN bed narrowPeak replicated peaks ENCSR000APC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H2AFZ-human ENCAB000ASY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF518XQA, ENCFF681OSA, ENCFF809JDN 2215903 ENCODE Processing Pipeline 37f3e8e8879a9efea6e596f327fb8113 https://www.encodeproject.org/files/ENCFF624XRN/@@download/ENCFF624XRN.bed.gz hg19 released low read depth, inconsistent platforms, low read length ENCFF921IKK bed narrowPeak replicated peaks ENCSR000APC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H2AFZ-human ENCAB000ASY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF267JLP, ENCFF422GBO, ENCFF451NLT 2280814 ENCODE Processing Pipeline 70e47dae6135e4c5d480e7a4236bd7ab https://www.encodeproject.org/files/ENCFF921IKK/@@download/ENCFF921IKK.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length ENCFF002CWY bed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YRV, ENCFF000YRW 281340 ENCODE Consortium Analysis Working Group 1fe51e31a98f953e464df554d510bbd2 https://www.encodeproject.org/files/ENCFF002CWY/@@download/ENCFF002CWY.bed.gz hg19 archived low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF998DOG bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF468BAA 4386773 ENCODE Processing Pipeline fbf22b1fa5c379715ba2c26fac7097af https://www.encodeproject.org/files/ENCFF998DOG/@@download/ENCFF998DOG.bed.gz hg19 released low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF090UOI bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF741YEW 2659144 ENCODE Processing Pipeline fa434ec9fc05555774c1c5ee83082cb7 https://www.encodeproject.org/files/ENCFF090UOI/@@download/ENCFF090UOI.bed.gz hg19 released low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF074NOU bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF468BAA, ENCFF741YEW 4740714 ENCODE Processing Pipeline 156e0def1016e3c17aac62329795254a https://www.encodeproject.org/files/ENCFF074NOU/@@download/ENCFF074NOU.bed.gz hg19 released low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF284VUQ bed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF074NOU, ENCFF456MUP, ENCFF998DOG 247503 ENCODE Processing Pipeline c4f00a8ce99ea04dbc4ba77382440ed9 https://www.encodeproject.org/files/ENCFF284VUQ/@@download/ENCFF284VUQ.bed.gz hg19 released low read depth, mixed read lengths, low read length mismatched status, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF999SXR bed narrowPeak conservative idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF074NOU, ENCFF456MUP, ENCFF998DOG 231538 ENCODE Processing Pipeline 40bd05402e8e663eab5009035c790bd8 https://www.encodeproject.org/files/ENCFF999SXR/@@download/ENCFF999SXR.bed.gz hg19 released low read depth, mixed read lengths, low read length mismatched status, mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF428TZB bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF482LDC, ENCFF728WOA 4385660 ENCODE Processing Pipeline 7642224d73455b2b97f72d1759ee99b3 https://www.encodeproject.org/files/ENCFF428TZB/@@download/ENCFF428TZB.bed.gz GRCh38 released low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF938AOL bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF489YJG 2700348 ENCODE Processing Pipeline 7a0f21770434ac666ef4639d8aa36df9 https://www.encodeproject.org/files/ENCFF938AOL/@@download/ENCFF938AOL.bed.gz GRCh38 released low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF131WCK bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF482LDC, ENCFF489YJG, ENCFF728WOA 4734472 ENCODE Processing Pipeline cb3be48f1ec22b43ced5a0e81152e3ee https://www.encodeproject.org/files/ENCFF131WCK/@@download/ENCFF131WCK.bed.gz GRCh38 released low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF548PPV bed narrowPeak conservative idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF131WCK, ENCFF419RSJ, ENCFF428TZB, ENCFF938AOL 234167 ENCODE Processing Pipeline 2e839a708bb9f56ef306715c5cf9b3bb https://www.encodeproject.org/files/ENCFF548PPV/@@download/ENCFF548PPV.bed.gz GRCh38 released low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF346LMY bed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF131WCK, ENCFF419RSJ, ENCFF428TZB, ENCFF938AOL 251613 ENCODE Processing Pipeline 88bc01e2bc400f74f411b8459b4d70c6 https://www.encodeproject.org/files/ENCFF346LMY/@@download/ENCFF346LMY.bed.gz GRCh38 released low read depth, mixed read lengths, low read length mismatched file status, biological replicates with identical biosample, file validation error insufficient read depth, insufficient read length ENCFF001VMR bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 80854 Sherman Weissman, Yale eac64e0aefa6def263bf52c0913fd11d https://www.encodeproject.org/files/ENCFF001VMR/@@download/ENCFF001VMR.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CWE bed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 229866 ENCODE Consortium Analysis Working Group 621f5c78a485d7d2f5774a508d526313 https://www.encodeproject.org/files/ENCFF002CWE/@@download/ENCFF002CWE.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF028OCG bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF834GPI, ENCFF998GMZ 3212789 ENCODE Processing Pipeline ed9641efadb73b9a2d36f0187bb15fd8 https://www.encodeproject.org/files/ENCFF028OCG/@@download/ENCFF028OCG.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF837BDB bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF203FSU, ENCFF998GMZ 3858506 ENCODE Processing Pipeline 9daa2ed65158062bc55f643142b2d1bc https://www.encodeproject.org/files/ENCFF837BDB/@@download/ENCFF837BDB.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF951BWR bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF203FSU, ENCFF834GPI, ENCFF998GMZ 5036397 ENCODE Processing Pipeline 55c27479c67c84b1bd80da3ed3f710d0 https://www.encodeproject.org/files/ENCFF951BWR/@@download/ENCFF951BWR.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF623EST bed narrowPeak conservative idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF028OCG, ENCFF837BDB, ENCFF951BWR 188455 ENCODE Processing Pipeline 1d4b58167f41b3310c71282b71aa46f4 https://www.encodeproject.org/files/ENCFF623EST/@@download/ENCFF623EST.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF248HIX bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF357MHM, ENCFF491EUN 5025965 ENCODE Processing Pipeline 0d0814783a85a290d472d57def0d2436 https://www.encodeproject.org/files/ENCFF248HIX/@@download/ENCFF248HIX.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF353EUL bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF491EUN 3760623 ENCODE Processing Pipeline bff80b3a99f1509fa4da5df2fb0ab5a4 https://www.encodeproject.org/files/ENCFF353EUL/@@download/ENCFF353EUL.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF243XZA bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF357MHM 3245727 ENCODE Processing Pipeline 68f8566686dcaf7ecb35b1020c39101c https://www.encodeproject.org/files/ENCFF243XZA/@@download/ENCFF243XZA.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF387LTN bed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF028OCG, ENCFF837BDB, ENCFF951BWR 214182 ENCODE Processing Pipeline 7f880cffb36b0f56b3b62739e6b4b1b4 https://www.encodeproject.org/files/ENCFF387LTN/@@download/ENCFF387LTN.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF120IMP bed narrowPeak conservative idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF243XZA, ENCFF248HIX, ENCFF353EUL, ENCFF419RSJ 187993 ENCODE Processing Pipeline 8fb1589bebc85e1feca2ade17dc30c5e https://www.encodeproject.org/files/ENCFF120IMP/@@download/ENCFF120IMP.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF339AQP bed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF243XZA, ENCFF248HIX, ENCFF353EUL, ENCFF419RSJ 213482 ENCODE Processing Pipeline 07ed17fb6c01e4e0b15d825fe992e974 https://www.encodeproject.org/files/ENCFF339AQP/@@download/ENCFF339AQP.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF001VPP bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1353696 Michael Snyder, Stanford 306c904ab969183a2dbaf7482691ec1d https://www.encodeproject.org/files/ENCFF001VPP/@@download/ENCFF001VPP.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF898RKR bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF023NGN, ENCFF171VBC 4923181 ENCODE Processing Pipeline de6b6be8d061ae1b06c2179df6498352 https://www.encodeproject.org/files/ENCFF898RKR/@@download/ENCFF898RKR.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF920ITB bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF023NGN, ENCFF140ZMN 4907183 ENCODE Processing Pipeline 013431a479101f094aae9650c5b41848 https://www.encodeproject.org/files/ENCFF920ITB/@@download/ENCFF920ITB.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF595ZFJ bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF023NGN, ENCFF140ZMN, ENCFF171VBC 5540085 ENCODE Processing Pipeline fd8c7ce7aefb330bf2dac01816929c04 https://www.encodeproject.org/files/ENCFF595ZFJ/@@download/ENCFF595ZFJ.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF567XKS bed narrowPeak conservative idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF419RSJ, ENCFF595ZFJ, ENCFF898RKR, ENCFF920ITB 343008 ENCODE Processing Pipeline a26aa5495638da3dad92f943c4f2124d https://www.encodeproject.org/files/ENCFF567XKS/@@download/ENCFF567XKS.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF106YXG bed narrowPeak optimal idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF419RSJ, ENCFF595ZFJ, ENCFF898RKR, ENCFF920ITB 355876 ENCODE Processing Pipeline 76abd36bb30120ad7ee294693c18f569 https://www.encodeproject.org/files/ENCFF106YXG/@@download/ENCFF106YXG.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF001VNS bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 830561 Michael Snyder, Stanford 53d37128b9036301c7fc2b74ee4bf7d2 https://www.encodeproject.org/files/ENCFF001VNS/@@download/ENCFF001VNS.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CXD bed narrowPeak optimal idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 633651 ENCODE Consortium Analysis Working Group 13a3c429f910b853f14a8fa2de029ec9 https://www.encodeproject.org/files/ENCFF002CXD/@@download/ENCFF002CXD.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF904QUW bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF360QBV 5509072 ENCODE Processing Pipeline 1db81d98be8d40323ddd69f3664c80f5 https://www.encodeproject.org/files/ENCFF904QUW/@@download/ENCFF904QUW.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF825YKX bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF635HIS 3547264 ENCODE Processing Pipeline 8dc0c4664be0be5875661174d99d52fe https://www.encodeproject.org/files/ENCFF825YKX/@@download/ENCFF825YKX.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF795AWI bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF360QBV, ENCFF635HIS 5850250 ENCODE Processing Pipeline 7fcce035ef6a6d48628090241f338d01 https://www.encodeproject.org/files/ENCFF795AWI/@@download/ENCFF795AWI.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF481AOS bed narrowPeak conservative idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF795AWI, ENCFF825YKX, ENCFF904QUW 491554 ENCODE Processing Pipeline 0f610de1495c38eac42b5bf0496297c6 https://www.encodeproject.org/files/ENCFF481AOS/@@download/ENCFF481AOS.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF618VMC bed narrowPeak optimal idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF795AWI, ENCFF825YKX, ENCFF904QUW 625612 ENCODE Processing Pipeline f4682a1dc246195895e23f28ea0ee326 https://www.encodeproject.org/files/ENCFF618VMC/@@download/ENCFF618VMC.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF001VML bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 40087 Sherman Weissman, Yale 7e467221e96e897de9d5ee0f78142062 https://www.encodeproject.org/files/ENCFF001VML/@@download/ENCFF001VML.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CVZ bed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 127221 ENCODE Consortium Analysis Working Group 8086db1d6870a8c9418dacda7340d3a7 https://www.encodeproject.org/files/ENCFF002CVZ/@@download/ENCFF002CVZ.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF041POZ bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278VAK, ENCFF998GMZ 2532916 ENCODE Processing Pipeline adf8683858265f42f5494538a255772b https://www.encodeproject.org/files/ENCFF041POZ/@@download/ENCFF041POZ.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF930BTW bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF643UCP 2255268 ENCODE Processing Pipeline 99288f81d434c9ce6c578533335c1349 https://www.encodeproject.org/files/ENCFF930BTW/@@download/ENCFF930BTW.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF829NXG bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF573AFD, ENCFF998GMZ 2294461 ENCODE Processing Pipeline 3fe26a31a072923e0bb45a0d9b66931c https://www.encodeproject.org/files/ENCFF829NXG/@@download/ENCFF829NXG.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF280ZZP bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF479JUJ 2519763 ENCODE Processing Pipeline fc18a979408a276e8afea3fed57bbbf0 https://www.encodeproject.org/files/ENCFF280ZZP/@@download/ENCFF280ZZP.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF862SHH bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF479JUJ, ENCFF643UCP 4417992 ENCODE Processing Pipeline aae811a8393cd976142ffe82526b9e1e https://www.encodeproject.org/files/ENCFF862SHH/@@download/ENCFF862SHH.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF605EZB bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278VAK, ENCFF573AFD, ENCFF998GMZ 4408438 ENCODE Processing Pipeline b063d9eb04e8363aae6bea84354936ef https://www.encodeproject.org/files/ENCFF605EZB/@@download/ENCFF605EZB.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF893WBV bed narrowPeak conservative idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF041POZ, ENCFF605EZB, ENCFF829NXG 82401 ENCODE Processing Pipeline 2d14742f5c29fbcf0d4581e73d7c260d https://www.encodeproject.org/files/ENCFF893WBV/@@download/ENCFF893WBV.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF385TGU bed narrowPeak conservative idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF280ZZP, ENCFF419RSJ, ENCFF862SHH, ENCFF930BTW 87491 ENCODE Processing Pipeline 275a50be81d82024d510faf668ec44f9 https://www.encodeproject.org/files/ENCFF385TGU/@@download/ENCFF385TGU.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF573GQX bed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF041POZ, ENCFF605EZB, ENCFF829NXG 84349 ENCODE Processing Pipeline abed910a74ad73f3c1db21033f7275f3 https://www.encodeproject.org/files/ENCFF573GQX/@@download/ENCFF573GQX.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF032UMW bed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF280ZZP, ENCFF419RSJ, ENCFF862SHH, ENCFF930BTW 90781 ENCODE Processing Pipeline fa444e84dbaab69ed24a22454f4b9bc9 https://www.encodeproject.org/files/ENCFF032UMW/@@download/ENCFF032UMW.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF672WGZ bed narrowPeak peaks ENCSR000AKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me2-human ENCAB000ANF DNA see document see document False 2011-02-10 ENCODE 1 ENCFF475HIM, ENCFF574XYY 1362401 ENCODE Processing Pipeline 9a6983f87cd5c7d692156bcfb018ae60 https://www.encodeproject.org/files/ENCFF672WGZ/@@download/ENCFF672WGZ.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF627TIZ bed narrowPeak peaks ENCSR000AKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me2-human ENCAB000ANF DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF408XXB, ENCFF475HIM, ENCFF574XYY 1678608 ENCODE Processing Pipeline afc9f2e35cb332a6febb1974931c039e https://www.encodeproject.org/files/ENCFF627TIZ/@@download/ENCFF627TIZ.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF626TOQ bed narrowPeak peaks ENCSR000AKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me2-human ENCAB000ANF DNA see document see document False 2011-02-10 ENCODE 2 ENCFF408XXB, ENCFF574XYY 1824457 ENCODE Processing Pipeline 2144e250097ec1aa6fed870aead796af https://www.encodeproject.org/files/ENCFF626TOQ/@@download/ENCFF626TOQ.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF565KKR bed narrowPeak peaks ENCSR000AKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me2-human ENCAB000ANF DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF773VGC 2236051 ENCODE Processing Pipeline d56589549e1b0d6ad261ec414f91879e https://www.encodeproject.org/files/ENCFF565KKR/@@download/ENCFF565KKR.bed.gz GRCh38 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF390XFA bed narrowPeak peaks ENCSR000AKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me2-human ENCAB000ANF DNA see document see document False 2011-02-10 ENCODE 1 ENCFF010SKB, ENCFF392XRJ 1363038 ENCODE Processing Pipeline 779789dca268345835a117d9cca5de47 https://www.encodeproject.org/files/ENCFF390XFA/@@download/ENCFF390XFA.bed.gz GRCh38 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF104FIT bed narrowPeak peaks ENCSR000AKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me2-human ENCAB000ANF DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF010SKB, ENCFF392XRJ, ENCFF773VGC 1679990 ENCODE Processing Pipeline ec3771fd4bee543d4cf1b87e4f8b5cb1 https://www.encodeproject.org/files/ENCFF104FIT/@@download/ENCFF104FIT.bed.gz GRCh38 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF099LMD bed narrowPeak replicated peaks ENCSR000AKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me2-human ENCAB000ANF DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF626TOQ, ENCFF627TIZ, ENCFF672WGZ 1613686 ENCODE Processing Pipeline 0b63569353e535f500e5f07c3e9ef692 https://www.encodeproject.org/files/ENCFF099LMD/@@download/ENCFF099LMD.bed.gz hg19 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF118PIE bed narrowPeak replicated peaks ENCSR000AKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K4me2-human ENCAB000ANF DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF104FIT, ENCFF390XFA, ENCFF565KKR 1630598 ENCODE Processing Pipeline 441c7c97aebb0ffbc265eacac75eb83d https://www.encodeproject.org/files/ENCFF118PIE/@@download/ENCFF118PIE.bed.gz GRCh38 released inconsistent platforms, mixed read lengths, low read length insufficient read depth ENCFF048CFD bed narrowPeak peaks ENCSR000AKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000ADU DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF673KBG 2896915 ENCODE Processing Pipeline 0d1fe166baf109d81b3a8571b4d1093e https://www.encodeproject.org/files/ENCFF048CFD/@@download/ENCFF048CFD.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth ENCFF316HBY bed narrowPeak peaks ENCSR000AKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000ADU DNA see document see document False 2011-02-10 ENCODE 1 ENCFF190AQC, ENCFF574XYY 2854699 ENCODE Processing Pipeline 64c26300b2ee5d5e7ea8972ecac9b71d https://www.encodeproject.org/files/ENCFF316HBY/@@download/ENCFF316HBY.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth ENCFF537EUG bed narrowPeak peaks ENCSR000AKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000ADU DNA see document see document False 2011-02-10 ENCODE 2 ENCFF303VNU, ENCFF574XYY 2861489 ENCODE Processing Pipeline 6e86a587929d0a416b9b640dda56bdeb https://www.encodeproject.org/files/ENCFF537EUG/@@download/ENCFF537EUG.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth ENCFF119BYM bed narrowPeak peaks ENCSR000AKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000ADU DNA see document see document False 2011-02-10 ENCODE 1 ENCFF392XRJ, ENCFF639PLN 2854788 ENCODE Processing Pipeline a8fb4474ef118184de3b546aead9cf18 https://www.encodeproject.org/files/ENCFF119BYM/@@download/ENCFF119BYM.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth ENCFF028HJF bed narrowPeak peaks ENCSR000AKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000ADU DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF392XRJ, ENCFF639PLN, ENCFF673KBG 3002240 ENCODE Processing Pipeline ef9c5766e992c25d283c2ae0f4764c28 https://www.encodeproject.org/files/ENCFF028HJF/@@download/ENCFF028HJF.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth ENCFF784HLI bed narrowPeak peaks ENCSR000AKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000ADU DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF190AQC, ENCFF303VNU, ENCFF574XYY 2987099 ENCODE Processing Pipeline 96e2ea8097d36a78c5d7dfb1095cd65c https://www.encodeproject.org/files/ENCFF784HLI/@@download/ENCFF784HLI.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth ENCFF053DAC bed narrowPeak replicated peaks ENCSR000AKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000ADU DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF028HJF, ENCFF048CFD, ENCFF119BYM 1893318 ENCODE Processing Pipeline 19fb923ac5a84abd36e52c4ad639febe https://www.encodeproject.org/files/ENCFF053DAC/@@download/ENCFF053DAC.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth ENCFF498CMP bed narrowPeak replicated peaks ENCSR000AKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens H3K36me3-human ENCAB000ADU DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF316HBY, ENCFF537EUG, ENCFF784HLI 1879024 ENCODE Processing Pipeline fa22ba33d7ded78cb75b3172e514f20b https://www.encodeproject.org/files/ENCFF498CMP/@@download/ENCFF498CMP.bed.gz hg19 released mild to moderate bottlenecking, inconsistent platforms, moderate library complexity, low read length insufficient read depth ENCFF002CMT bed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 623516 ENCODE Consortium Analysis Working Group 90e37355f317426523602e11b566c865 https://www.encodeproject.org/files/ENCFF002CMT/@@download/ENCFF002CMT.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF299QNM bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF516UTV, ENCFF790FNF 7037740 ENCODE Processing Pipeline 6f9388b8a1e1bd07f65361eafd5fb445 https://www.encodeproject.org/files/ENCFF299QNM/@@download/ENCFF299QNM.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF841NBP bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF790FNF 6212835 ENCODE Processing Pipeline ee29b0cffb6c589e4e173445c51c4f4a https://www.encodeproject.org/files/ENCFF841NBP/@@download/ENCFF841NBP.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF736BJY bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF516UTV 6566541 ENCODE Processing Pipeline 0253413adfbb4baa40646189ecfd0382 https://www.encodeproject.org/files/ENCFF736BJY/@@download/ENCFF736BJY.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF779ZST bed narrowPeak conservative idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF299QNM, ENCFF419RSJ, ENCFF736BJY, ENCFF841NBP 540415 ENCODE Processing Pipeline 136ebaa4e07d4e452ff77f4d52816a85 https://www.encodeproject.org/files/ENCFF779ZST/@@download/ENCFF779ZST.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF547MLB bed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF299QNM, ENCFF419RSJ, ENCFF736BJY, ENCFF841NBP 632110 ENCODE Processing Pipeline 2b0ac9b8c1ad843bb00b47401296ab78 https://www.encodeproject.org/files/ENCFF547MLB/@@download/ENCFF547MLB.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF001VOE bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 194293 Sherman Weissman, Yale 12aaf5f1a39afac91f5ca2aba90eb3dd https://www.encodeproject.org/files/ENCFF001VOE/@@download/ENCFF001VOE.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CXN bed narrowPeak optimal idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 271627 ENCODE Consortium Analysis Working Group 2e251f0a3e82ac18e6e3da60a5ce00f8 https://www.encodeproject.org/files/ENCFF002CXN/@@download/ENCFF002CXN.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF195EME bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278NAG, ENCFF998GMZ 4582388 ENCODE Processing Pipeline 2f94b0529ae9ecc665a2ddfb4eaa134b https://www.encodeproject.org/files/ENCFF195EME/@@download/ENCFF195EME.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF196LRG bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF788CTS, ENCFF998GMZ 5084258 ENCODE Processing Pipeline 938c4d948378101e300b807bce985979 https://www.encodeproject.org/files/ENCFF196LRG/@@download/ENCFF196LRG.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF274EWP bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278NAG, ENCFF788CTS, ENCFF998GMZ 5988657 ENCODE Processing Pipeline 1135ed2b1bb71be45b98986e3e1bd661 https://www.encodeproject.org/files/ENCFF274EWP/@@download/ENCFF274EWP.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF286HZT bed narrowPeak conservative idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF195EME, ENCFF196LRG, ENCFF274EWP 305034 ENCODE Processing Pipeline 90cfa1e7c0776ce0feae8e32068157cf https://www.encodeproject.org/files/ENCFF286HZT/@@download/ENCFF286HZT.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF206YXX bed narrowPeak optimal idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF195EME, ENCFF196LRG, ENCFF274EWP 326220 ENCODE Processing Pipeline c00b821c15db119f2de9065176aee084 https://www.encodeproject.org/files/ENCFF206YXX/@@download/ENCFF206YXX.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF001VNV bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 551098 Michael Snyder, Stanford 47edb8c708aa3e49b94b4b5aae4db4e7 https://www.encodeproject.org/files/ENCFF001VNV/@@download/ENCFF001VNV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF002CXF bed narrowPeak optimal idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 167844 ENCODE Consortium Analysis Working Group ad39164396d52a0f2553d28532d80f58 https://www.encodeproject.org/files/ENCFF002CXF/@@download/ENCFF002CXF.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF332OJQ bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF388QNA 4540403 ENCODE Processing Pipeline 5ed7d4caa3ebe1bd929c3fe6188b94d7 https://www.encodeproject.org/files/ENCFF332OJQ/@@download/ENCFF332OJQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF995LKI bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF726UVN 4372633 ENCODE Processing Pipeline 278c0604af419ebf0e405ac98cbcb14a https://www.encodeproject.org/files/ENCFF995LKI/@@download/ENCFF995LKI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF677CNS bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF388QNA, ENCFF726UVN 5350178 ENCODE Processing Pipeline 1cb8ce590f11480818c7e1bb1647442a https://www.encodeproject.org/files/ENCFF677CNS/@@download/ENCFF677CNS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF457COE bed narrowPeak conservative idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332OJQ, ENCFF419RSJ, ENCFF677CNS, ENCFF995LKI 155026 ENCODE Processing Pipeline 2248e533b5649bdaec1288dd8d001e48 https://www.encodeproject.org/files/ENCFF457COE/@@download/ENCFF457COE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF243QTL bed narrowPeak optimal idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332OJQ, ENCFF419RSJ, ENCFF677CNS, ENCFF995LKI 161340 ENCODE Processing Pipeline ef2162b321cb4db6098cbf3f2a634995 https://www.encodeproject.org/files/ENCFF243QTL/@@download/ENCFF243QTL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF001VPH bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 183098 Michael Snyder, Stanford ffaffe9000db54e46d06658318118df8 https://www.encodeproject.org/files/ENCFF001VPH/@@download/ENCFF001VPH.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CYP bed narrowPeak optimal idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 82850 ENCODE Consortium Analysis Working Group 23baed3c990373140369f62e3ea7b8d4 https://www.encodeproject.org/files/ENCFF002CYP/@@download/ENCFF002CYP.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF891RTU bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF434RFX 4123952 ENCODE Processing Pipeline 432c5e28192a686478fcc45a5255b68b https://www.encodeproject.org/files/ENCFF891RTU/@@download/ENCFF891RTU.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF420KJG bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF420ZVF 4212444 ENCODE Processing Pipeline 14a60ce2f87ff66cc864b4b3520f09d3 https://www.encodeproject.org/files/ENCFF420KJG/@@download/ENCFF420KJG.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF998IVE bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF420ZVF, ENCFF434RFX 4798222 ENCODE Processing Pipeline bf859cab39d5c4220caf0f9ce086909a https://www.encodeproject.org/files/ENCFF998IVE/@@download/ENCFF998IVE.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF425FVY bed narrowPeak optimal idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF420KJG, ENCFF891RTU, ENCFF998IVE 64564 ENCODE Processing Pipeline a832fa37d29027be36f00c525b726315 https://www.encodeproject.org/files/ENCFF425FVY/@@download/ENCFF425FVY.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF602YIK bed narrowPeak conservative idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF420KJG, ENCFF891RTU, ENCFF998IVE 62768 ENCODE Processing Pipeline 5891db2058400134fe8121810abcd9ac https://www.encodeproject.org/files/ENCFF602YIK/@@download/ENCFF602YIK.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF001VMG bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 896817 Michael Snyder, Stanford d20fccbb76459a4b2a02a3814b92bdd7 https://www.encodeproject.org/files/ENCFF001VMG/@@download/ENCFF001VMG.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF688YAV bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF482CMU, ENCFF662BBY 5971527 ENCODE Processing Pipeline 4e8841d5ebff8c4658b72c66bc13cbd2 https://www.encodeproject.org/files/ENCFF688YAV/@@download/ENCFF688YAV.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF556HMX bed narrowPeak optimal idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF137HNJ, ENCFF419RSJ, ENCFF641LBE, ENCFF688YAV 123219 ENCODE Processing Pipeline 153c91356349810df0579535ad132ba6 https://www.encodeproject.org/files/ENCFF556HMX/@@download/ENCFF556HMX.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF137HNJ bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF482CMU 4905460 ENCODE Processing Pipeline b70e9d46397434a3f3d1a5ddbb2d533b https://www.encodeproject.org/files/ENCFF137HNJ/@@download/ENCFF137HNJ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF641LBE bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF662BBY 5288083 ENCODE Processing Pipeline 7ac5c8405b5927e5f9b076b6ac89aa1a https://www.encodeproject.org/files/ENCFF641LBE/@@download/ENCFF641LBE.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF317FDT bed narrowPeak conservative idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF137HNJ, ENCFF419RSJ, ENCFF641LBE, ENCFF688YAV 112575 ENCODE Processing Pipeline 22ae477e9685f1d8122ffb421f7be648 https://www.encodeproject.org/files/ENCFF317FDT/@@download/ENCFF317FDT.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF001VOT bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 771829 Michael Snyder, Stanford a72c84f021798c44d11750ea7679ffbf https://www.encodeproject.org/files/ENCFF001VOT/@@download/ENCFF001VOT.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample, NTR biosample insufficient read depth ENCFF002CYA bed narrowPeak optimal idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 539320 ENCODE Consortium Analysis Working Group 95bc0f5d20a06647d0aaa79420ee0dc4 https://www.encodeproject.org/files/ENCFF002CYA/@@download/ENCFF002CYA.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample, NTR biosample insufficient read depth ENCFF721SRJ bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF365BCR 4299042 ENCODE Processing Pipeline 8d4bbeb45a99af567455f4da994b04e5 https://www.encodeproject.org/files/ENCFF721SRJ/@@download/ENCFF721SRJ.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample insufficient read depth ENCFF995RPX bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355PQK 3696739 ENCODE Processing Pipeline 7e8ff814648709abaf90c0c0b7e234ac https://www.encodeproject.org/files/ENCFF995RPX/@@download/ENCFF995RPX.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample insufficient read depth ENCFF151QJM bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355PQK, ENCFF365BCR 4804647 ENCODE Processing Pipeline 111db4e634d317fba0756ac2325159ab https://www.encodeproject.org/files/ENCFF151QJM/@@download/ENCFF151QJM.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample insufficient read depth ENCFF662LUH bed narrowPeak conservative idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF151QJM, ENCFF419RSJ, ENCFF721SRJ, ENCFF995RPX 442869 ENCODE Processing Pipeline fc88b324e2fe8080ad2b30b605fb8e8b https://www.encodeproject.org/files/ENCFF662LUH/@@download/ENCFF662LUH.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample insufficient read depth ENCFF175UEE bed narrowPeak optimal idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF151QJM, ENCFF419RSJ, ENCFF721SRJ, ENCFF995RPX 451497 ENCODE Processing Pipeline 4dd98262b2cba021b22620f40fbb0ad5 https://www.encodeproject.org/files/ENCFF175UEE/@@download/ENCFF175UEE.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample insufficient read depth ENCFF001VOB bed narrowPeak peaks ENCSR000EGY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 325346 Michael Snyder, Stanford 882d3a365a7eb97c3e086b11f094aa3a https://www.encodeproject.org/files/ENCFF001VOB/@@download/ENCFF001VOB.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample extremely low read depth ENCFF792BGD bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF261IPD, ENCFF581ZJL 7131811 ENCODE Processing Pipeline 67d81b44082df3acf776e6da2c5fab41 https://www.encodeproject.org/files/ENCFF792BGD/@@download/ENCFF792BGD.bed.gz hg19 released missing unfiltered alignments ENCFF247ZEK bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF051LWI, ENCFF585HLM 7215524 ENCODE Processing Pipeline 568aa4401b01bb57d232d82928afe0d4 https://www.encodeproject.org/files/ENCFF247ZEK/@@download/ENCFF247ZEK.bed.gz hg19 released missing unfiltered alignments ENCFF663HVK bed narrowPeak conservative idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF001TDO, ENCFF226IEC, ENCFF247ZEK, ENCFF792BGD 1153076 ENCODE Processing Pipeline a5c27b4a3d369bf4c1c5c75e02b57645 https://www.encodeproject.org/files/ENCFF663HVK/@@download/ENCFF663HVK.bed.gz hg19 released missing unfiltered alignments ENCFF226IEC bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF051LWI, ENCFF261IPD, ENCFF581ZJL, ENCFF585HLM 7331628 ENCODE Processing Pipeline bb7ab94faf3c35c0751195507dbfaf7e https://www.encodeproject.org/files/ENCFF226IEC/@@download/ENCFF226IEC.bed.gz hg19 released missing unfiltered alignments ENCFF788EBS bed narrowPeak optimal idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF001TDO, ENCFF226IEC, ENCFF247ZEK, ENCFF792BGD 1540943 ENCODE Processing Pipeline 3a0d9fd7b87bc7f13bbf44c634b50a0c https://www.encodeproject.org/files/ENCFF788EBS/@@download/ENCFF788EBS.bed.gz hg19 released missing unfiltered alignments ENCFF777HYZ bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF267EEY 7103899 ENCODE Processing Pipeline e5ffbe0a27bfbd5c0be17af87777aa1c https://www.encodeproject.org/files/ENCFF777HYZ/@@download/ENCFF777HYZ.bed.gz GRCh38 released missing unfiltered alignments ENCFF953GBT bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF908CYX 7165573 ENCODE Processing Pipeline df1fb8a13c4ca361d6e42485219b29f3 https://www.encodeproject.org/files/ENCFF953GBT/@@download/ENCFF953GBT.bed.gz GRCh38 released missing unfiltered alignments ENCFF885VGV bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF267EEY, ENCFF908CYX 7269569 ENCODE Processing Pipeline 476140cf9f2e9a47e8557079ee0016c7 https://www.encodeproject.org/files/ENCFF885VGV/@@download/ENCFF885VGV.bed.gz GRCh38 released missing unfiltered alignments ENCFF195JOB bed narrowPeak conservative idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF777HYZ, ENCFF885VGV, ENCFF953GBT 1133273 ENCODE Processing Pipeline d54b5396de6029343654fc861b3da713 https://www.encodeproject.org/files/ENCFF195JOB/@@download/ENCFF195JOB.bed.gz GRCh38 released missing unfiltered alignments ENCFF806GUF bed narrowPeak optimal idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF777HYZ, ENCFF885VGV, ENCFF953GBT 1520737 ENCODE Processing Pipeline 1dba0952313fc92e69d70299249b4b11 https://www.encodeproject.org/files/ENCFF806GUF/@@download/ENCFF806GUF.bed.gz GRCh38 released missing unfiltered alignments ENCFF001VNR bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSW, ENCFF000YSY 1395340 Michael Snyder, Stanford a1c38b95f48a0d8af3b086c6d817893b https://www.encodeproject.org/files/ENCFF001VNR/@@download/ENCFF001VNR.bed.gz hg19 archived low read length biological replicates with identical biosample ENCFF002CXC bed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSW, ENCFF000YSY 490515 ENCODE Consortium Analysis Working Group a22f865a9c3be78243d4c596c899686a https://www.encodeproject.org/files/ENCFF002CXC/@@download/ENCFF002CXC.bed.gz hg19 archived low read length biological replicates with identical biosample ENCFF660EKS bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF433CEB, ENCFF560QPO, ENCFF710NTS 6291523 ENCODE Processing Pipeline 9ec9d8d02dedaae9c7d7129a641d1e45 https://www.encodeproject.org/files/ENCFF660EKS/@@download/ENCFF660EKS.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF887IBL bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF560QPO, ENCFF710NTS 5347011 ENCODE Processing Pipeline 073cbf8f91573c530d13ce12e03197d0 https://www.encodeproject.org/files/ENCFF887IBL/@@download/ENCFF887IBL.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF715WON bed narrowPeak conservative idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF072BMK, ENCFF660EKS, ENCFF887IBL 377511 ENCODE Processing Pipeline 0a5826ffba796be6f2b35d9d2e574962 https://www.encodeproject.org/files/ENCFF715WON/@@download/ENCFF715WON.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF072BMK bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF433CEB, ENCFF710NTS 5075327 ENCODE Processing Pipeline baca76bc8dd54ade1118dfe4cbaefb37 https://www.encodeproject.org/files/ENCFF072BMK/@@download/ENCFF072BMK.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF812QPN bed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF072BMK, ENCFF660EKS, ENCFF887IBL 482148 ENCODE Processing Pipeline 9508b48c5610d3882fe8c0e0e9bbd23e https://www.encodeproject.org/files/ENCFF812QPN/@@download/ENCFF812QPN.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF443MTV bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF719OIE 4977725 ENCODE Processing Pipeline a1ebdeb28a843fcc36c0d28e5c631e62 https://www.encodeproject.org/files/ENCFF443MTV/@@download/ENCFF443MTV.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF525DOE bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF852HSQ 5123288 ENCODE Processing Pipeline a97292dbcdbc1fe9ddfbdfea9617ebe2 https://www.encodeproject.org/files/ENCFF525DOE/@@download/ENCFF525DOE.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF420ZOS bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF719OIE, ENCFF852HSQ 6102064 ENCODE Processing Pipeline 2a1788a5cadb7b0714d6deb620dceb88 https://www.encodeproject.org/files/ENCFF420ZOS/@@download/ENCFF420ZOS.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF216COR bed narrowPeak conservative idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF420ZOS, ENCFF443MTV, ENCFF525DOE 377232 ENCODE Processing Pipeline 144e91de5892cda2efb5abb4a837127d https://www.encodeproject.org/files/ENCFF216COR/@@download/ENCFF216COR.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF893SCL bed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF420ZOS, ENCFF443MTV, ENCFF525DOE 477127 ENCODE Processing Pipeline 71d744d2459018e65e97fef53e8a8ded https://www.encodeproject.org/files/ENCFF893SCL/@@download/ENCFF893SCL.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF001VMW bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 983518 Michael Snyder, Stanford 46643afa087886801b6ca67ad4b89878 https://www.encodeproject.org/files/ENCFF001VMW/@@download/ENCFF001VMW.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CWJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 157869 ENCODE Consortium Analysis Working Group 00c00dfe8c61c384b777f1d95c60fc29 https://www.encodeproject.org/files/ENCFF002CWJ/@@download/ENCFF002CWJ.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF917EAJ bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF623TAD 5045652 ENCODE Processing Pipeline e017ddfe84d8fd0eaaa29d0314c9613a https://www.encodeproject.org/files/ENCFF917EAJ/@@download/ENCFF917EAJ.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF470SPH bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF112DFJ 5349337 ENCODE Processing Pipeline de0b92c1aa9873187b949f6bd88eaa19 https://www.encodeproject.org/files/ENCFF470SPH/@@download/ENCFF470SPH.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF389ISM bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF112DFJ, ENCFF623TAD 2757610 ENCODE Processing Pipeline e18493416146daae1fe90e2c072441d0 https://www.encodeproject.org/files/ENCFF389ISM/@@download/ENCFF389ISM.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF170JJV bed narrowPeak conservative idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF389ISM, ENCFF419RSJ, ENCFF470SPH, ENCFF917EAJ 90756 ENCODE Processing Pipeline d4e3a50fecac54e9dc9f159b71b4e656 https://www.encodeproject.org/files/ENCFF170JJV/@@download/ENCFF170JJV.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF968SUH bed narrowPeak optimal idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF389ISM, ENCFF419RSJ, ENCFF470SPH, ENCFF917EAJ 123152 ENCODE Processing Pipeline 1481dcd0e4051afd7bbabee2758f0e75 https://www.encodeproject.org/files/ENCFF968SUH/@@download/ENCFF968SUH.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF001VPA bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 694993 Michael Snyder, Stanford 1a5b0eb668f8ebaa2382eefc709dc80f https://www.encodeproject.org/files/ENCFF001VPA/@@download/ENCFF001VPA.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CYI bed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 132380 ENCODE Consortium Analysis Working Group 7179d23bbb19655b2530129332aab3e8 https://www.encodeproject.org/files/ENCFF002CYI/@@download/ENCFF002CYI.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF570BGF bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF676WXJ, ENCFF710NTS 5126978 ENCODE Processing Pipeline 3dbc54e6e80b80390a000d4502766d78 https://www.encodeproject.org/files/ENCFF570BGF/@@download/ENCFF570BGF.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF029WBH bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF645ZSW, ENCFF676WXJ, ENCFF710NTS 6005378 ENCODE Processing Pipeline fa7e9ed24a7267861d7c2a5a0676614c https://www.encodeproject.org/files/ENCFF029WBH/@@download/ENCFF029WBH.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF531SEM bed narrowPeak conservative idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF029WBH, ENCFF148FBK, ENCFF570BGF 96529 ENCODE Processing Pipeline c9dd62cbe23924e6a27e0c5ec0ce92fe https://www.encodeproject.org/files/ENCFF531SEM/@@download/ENCFF531SEM.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF048OBR bed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF029WBH, ENCFF148FBK, ENCFF570BGF 116170 ENCODE Processing Pipeline af849a8e32cce9ef81c5076327bc52fa https://www.encodeproject.org/files/ENCFF048OBR/@@download/ENCFF048OBR.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF148FBK bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF645ZSW, ENCFF710NTS 5143978 ENCODE Processing Pipeline dcb2ca543a2f81c300abae00838438a4 https://www.encodeproject.org/files/ENCFF148FBK/@@download/ENCFF148FBK.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF172HUV bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF946HWT 5048555 ENCODE Processing Pipeline d49981a8c968db9c6e0d3563222b6d9e https://www.encodeproject.org/files/ENCFF172HUV/@@download/ENCFF172HUV.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF140JVE bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF964COC 5129323 ENCODE Processing Pipeline 8f93783c28ddb7eb66e80634938eaa23 https://www.encodeproject.org/files/ENCFF140JVE/@@download/ENCFF140JVE.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF708TPP bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF946HWT, ENCFF964COC 5989284 ENCODE Processing Pipeline 05dcf53e8581f96009b9c03d9ce1c5aa https://www.encodeproject.org/files/ENCFF708TPP/@@download/ENCFF708TPP.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF117UOA bed narrowPeak conservative idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF140JVE, ENCFF172HUV, ENCFF419RSJ, ENCFF708TPP 98813 ENCODE Processing Pipeline e6913cd83fb6875729a355488118b229 https://www.encodeproject.org/files/ENCFF117UOA/@@download/ENCFF117UOA.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF239WFN bed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF140JVE, ENCFF172HUV, ENCFF419RSJ, ENCFF708TPP 117271 ENCODE Processing Pipeline 0bb3f6845b1bbca94e1dfd27a3c65a75 https://www.encodeproject.org/files/ENCFF239WFN/@@download/ENCFF239WFN.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF001VLZ bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 429763 Michael Snyder, Stanford 42895329fc8db2bc4549f005a13e4d72 https://www.encodeproject.org/files/ENCFF001VLZ/@@download/ENCFF001VLZ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF002CVO bed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 101541 ENCODE Consortium Analysis Working Group ffaad9c424d927abf310d20c1269cd5a https://www.encodeproject.org/files/ENCFF002CVO/@@download/ENCFF002CVO.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF107CCL bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF751ATX 4278578 ENCODE Processing Pipeline b256805c9fc102b8db586279a1c74419 https://www.encodeproject.org/files/ENCFF107CCL/@@download/ENCFF107CCL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF276CQA bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF710NTS, ENCFF751ATX, ENCFF866OHV 5238136 ENCODE Processing Pipeline c3e066aff3729d33b326745168c36d54 https://www.encodeproject.org/files/ENCFF276CQA/@@download/ENCFF276CQA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF423EMU bed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF091TOR, ENCFF107CCL, ENCFF276CQA 88613 ENCODE Processing Pipeline 4a5e60199fc2e91ed05449790c0ead65 https://www.encodeproject.org/files/ENCFF423EMU/@@download/ENCFF423EMU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF846TVV bed narrowPeak conservative idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF091TOR, ENCFF107CCL, ENCFF276CQA 83592 ENCODE Processing Pipeline 6f07554d56f50cb18b66639ffb6a81b1 https://www.encodeproject.org/files/ENCFF846TVV/@@download/ENCFF846TVV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF091TOR bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF710NTS, ENCFF866OHV 4520836 ENCODE Processing Pipeline 5e14d520c61c7a53b23765785084f5de https://www.encodeproject.org/files/ENCFF091TOR/@@download/ENCFF091TOR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF416UYQ bed narrowPeak conservative idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF063XMG, ENCFF419RSJ, ENCFF755GPS, ENCFF830GYV 82877 ENCODE Processing Pipeline 51c52fafc8050bd1966380f2a1562d17 https://www.encodeproject.org/files/ENCFF416UYQ/@@download/ENCFF416UYQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF830GYV bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF540DXB 4526892 ENCODE Processing Pipeline 58b732d0067976bb8e450feb3f970194 https://www.encodeproject.org/files/ENCFF830GYV/@@download/ENCFF830GYV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF063XMG bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF151GOI 3990323 ENCODE Processing Pipeline 61b8477415b3396c6b51d2f2da09eeed https://www.encodeproject.org/files/ENCFF063XMG/@@download/ENCFF063XMG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF755GPS bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF151GOI, ENCFF540DXB 5196760 ENCODE Processing Pipeline fa369f2e298e9a4823720660de359bb6 https://www.encodeproject.org/files/ENCFF755GPS/@@download/ENCFF755GPS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF543FNN bed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF063XMG, ENCFF419RSJ, ENCFF755GPS, ENCFF830GYV 88418 ENCODE Processing Pipeline 148db2913335434c4f79f4c04b546a2b https://www.encodeproject.org/files/ENCFF543FNN/@@download/ENCFF543FNN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF001VMJ bed narrowPeak peaks ENCSR000EHD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 612152 Michael Snyder, Stanford 5b5757e2837959b2d31e866c7b1c9474 https://www.encodeproject.org/files/ENCFF001VMJ/@@download/ENCFF001VMJ.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CVX bed narrowPeak optimal idr thresholded peaks ENCSR000EHD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 180740 ENCODE Consortium Analysis Working Group fb1dfe8e79debff8a8c980ed02b6612a https://www.encodeproject.org/files/ENCFF002CVX/@@download/ENCFF002CVX.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF935RWY bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF023YMB, ENCFF388AJM 6270021 ENCODE Processing Pipeline dbc92775e620277e3b12ed79fdb72198 https://www.encodeproject.org/files/ENCFF935RWY/@@download/ENCFF935RWY.bed.gz hg19 released low read depth ENCFF939VGO bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF057WPZ, ENCFF092ACZ 5334856 ENCODE Processing Pipeline eff79c853adca22eacf0d0f889aabc8d https://www.encodeproject.org/files/ENCFF939VGO/@@download/ENCFF939VGO.bed.gz hg19 released low read depth ENCFF649MHK bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF023YMB, ENCFF057WPZ, ENCFF092ACZ, ENCFF388AJM 6815016 ENCODE Processing Pipeline 1e97055946a0cdc1b6155530135a8074 https://www.encodeproject.org/files/ENCFF649MHK/@@download/ENCFF649MHK.bed.gz hg19 released low read depth ENCFF496CSN bed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF001TDO, ENCFF649MHK, ENCFF935RWY, ENCFF939VGO 196970 ENCODE Processing Pipeline 5879d9de68c11d1bf13234fc432a76b8 https://www.encodeproject.org/files/ENCFF496CSN/@@download/ENCFF496CSN.bed.gz hg19 released low read depth ENCFF470MLY bed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF001TDO, ENCFF649MHK, ENCFF935RWY, ENCFF939VGO 263596 ENCODE Processing Pipeline 4deea444df0f55717f0b9f7d26c0db9b https://www.encodeproject.org/files/ENCFF470MLY/@@download/ENCFF470MLY.bed.gz hg19 released low read depth ENCFF786NME bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF502VUK, ENCFF655OEX 6686514 ENCODE Processing Pipeline 8313c07392a735e4c4825a41653894af https://www.encodeproject.org/files/ENCFF786NME/@@download/ENCFF786NME.bed.gz GRCh38 released low read depth ENCFF183QZB bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF655OEX 6067722 ENCODE Processing Pipeline 4d460eb19f03963eb9813170043022c0 https://www.encodeproject.org/files/ENCFF183QZB/@@download/ENCFF183QZB.bed.gz GRCh38 released low read depth ENCFF674UBG bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF502VUK 5142366 ENCODE Processing Pipeline b9435d56291e10aac952795e0061b933 https://www.encodeproject.org/files/ENCFF674UBG/@@download/ENCFF674UBG.bed.gz GRCh38 released low read depth ENCFF768YPD bed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF183QZB, ENCFF419RSJ, ENCFF674UBG, ENCFF786NME 200845 ENCODE Processing Pipeline 076cba5a53b9d3e8cfedd0606cdc0985 https://www.encodeproject.org/files/ENCFF768YPD/@@download/ENCFF768YPD.bed.gz GRCh38 released low read depth ENCFF617QSK bed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF183QZB, ENCFF419RSJ, ENCFF674UBG, ENCFF786NME 266336 ENCODE Processing Pipeline 046b782ea7920ad8889abd52fee8102b https://www.encodeproject.org/files/ENCFF617QSK/@@download/ENCFF617QSK.bed.gz GRCh38 released low read depth ENCFF001VMQ bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 46587 Sherman Weissman, Yale 4e22d0d1055653b9d9d5d0df8b4aa04d https://www.encodeproject.org/files/ENCFF001VMQ/@@download/ENCFF001VMQ.bed.gz hg19 archived borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CWD bed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 174210 ENCODE Consortium Analysis Working Group f2e6a896ed9f1597694b779de3fa7a23 https://www.encodeproject.org/files/ENCFF002CWD/@@download/ENCFF002CWD.bed.gz hg19 archived borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF517GFP bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF929JOF 3101096 ENCODE Processing Pipeline e2be7bd7967e11d555813e58abd60384 https://www.encodeproject.org/files/ENCFF517GFP/@@download/ENCFF517GFP.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF761YWV bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF504AWB, ENCFF650MOB, ENCFF929JOF 4870351 ENCODE Processing Pipeline c10e60e9a670d181856d800248875a13 https://www.encodeproject.org/files/ENCFF761YWV/@@download/ENCFF761YWV.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF726YHM bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF504AWB, ENCFF650MOB 3041994 ENCODE Processing Pipeline 1a28c8a592152dca965a48085b9c329b https://www.encodeproject.org/files/ENCFF726YHM/@@download/ENCFF726YHM.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF285ILQ bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF439NNR, ENCFF767FSP 3083522 ENCODE Processing Pipeline 6cb236a6472a2e11d1a1b97e285498a4 https://www.encodeproject.org/files/ENCFF285ILQ/@@download/ENCFF285ILQ.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF758MFJ bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF483RLD, ENCFF767FSP 3037268 ENCODE Processing Pipeline 07ec6786ce2da62cd19b240242b92781 https://www.encodeproject.org/files/ENCFF758MFJ/@@download/ENCFF758MFJ.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF051ILG bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF439NNR, ENCFF483RLD, ENCFF767FSP 4839291 ENCODE Processing Pipeline b3ef4775e7c0c36edb6a4a2c3c8e4e2d https://www.encodeproject.org/files/ENCFF051ILG/@@download/ENCFF051ILG.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF836PBB bed narrowPeak conservative idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF517GFP, ENCFF726YHM, ENCFF761YWV 124991 ENCODE Processing Pipeline 0ef5794ebc84c309d877ac7933d8237d https://www.encodeproject.org/files/ENCFF836PBB/@@download/ENCFF836PBB.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF634AYU bed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF517GFP, ENCFF726YHM, ENCFF761YWV 156795 ENCODE Processing Pipeline 730d1f4239612dda93845a2c03f5db0d https://www.encodeproject.org/files/ENCFF634AYU/@@download/ENCFF634AYU.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF695KNI bed narrowPeak conservative idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ILG, ENCFF285ILQ, ENCFF419RSJ, ENCFF758MFJ 125693 ENCODE Processing Pipeline 9a50d2ade59b083ac3fe633380293c9a https://www.encodeproject.org/files/ENCFF695KNI/@@download/ENCFF695KNI.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF700TLG bed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ILG, ENCFF285ILQ, ENCFF419RSJ, ENCFF758MFJ 158337 ENCODE Processing Pipeline ff1b2e4c23fa1e538b57ef5f01112acd https://www.encodeproject.org/files/ENCFF700TLG/@@download/ENCFF700TLG.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CLR bed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 435226 ENCODE Consortium Analysis Working Group 2d10e26f9b61edce33b6059246986ef0 https://www.encodeproject.org/files/ENCFF002CLR/@@download/ENCFF002CLR.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF712GEQ bed narrowPeak conservative idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF220UJA, ENCFF258YCI, ENCFF419RSJ, ENCFF891QTR 255544 ENCODE Processing Pipeline d204ffcab93fcab5a58daf5ebacfaf70 https://www.encodeproject.org/files/ENCFF712GEQ/@@download/ENCFF712GEQ.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF220UJA bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF314OQP 6077612 ENCODE Processing Pipeline e8b679ead2b7957fcd533951f297e073 https://www.encodeproject.org/files/ENCFF220UJA/@@download/ENCFF220UJA.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF891QTR bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF154YTN, ENCFF314OQP 6235739 ENCODE Processing Pipeline 27212a268b47e11e2cf376ecb5f0b471 https://www.encodeproject.org/files/ENCFF891QTR/@@download/ENCFF891QTR.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF258YCI bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF154YTN 1811778 ENCODE Processing Pipeline 681fe5f239a1ff29b4023defd9d37409 https://www.encodeproject.org/files/ENCFF258YCI/@@download/ENCFF258YCI.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF813LOW bed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF220UJA, ENCFF258YCI, ENCFF419RSJ, ENCFF891QTR 415368 ENCODE Processing Pipeline 8163db7fab7a18aae4396d2cc750b4c1 https://www.encodeproject.org/files/ENCFF813LOW/@@download/ENCFF813LOW.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF001VOY bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 16103 Sherman Weissman, Yale d1811f74462e9d25becbae05f7872427 https://www.encodeproject.org/files/ENCFF001VOY/@@download/ENCFF001VOY.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYG bed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 52027 ENCODE Consortium Analysis Working Group 536662a0526af993e9407b8b17b37312 https://www.encodeproject.org/files/ENCFF002CYG/@@download/ENCFF002CYG.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF201CUI bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF876GQO, ENCFF951ITB 4164833 ENCODE Processing Pipeline eb9e489f4bc9bbec28e61a313f62f383 https://www.encodeproject.org/files/ENCFF201CUI/@@download/ENCFF201CUI.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF599VMK bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF969WVY, ENCFF998GMZ 1345941 ENCODE Processing Pipeline ad7df233444d5a1f7d90a06cba4f1494 https://www.encodeproject.org/files/ENCFF599VMK/@@download/ENCFF599VMK.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF544MLF bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF951ITB 1346705 ENCODE Processing Pipeline 67d90fcc463688fddf29ebbe857508a3 https://www.encodeproject.org/files/ENCFF544MLF/@@download/ENCFF544MLF.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF127UZX bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF900YNG, ENCFF998GMZ 2639252 ENCODE Processing Pipeline 5a179ea069533493ab67c3846b2f16e4 https://www.encodeproject.org/files/ENCFF127UZX/@@download/ENCFF127UZX.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF123YGX bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF876GQO 2634911 ENCODE Processing Pipeline 8649724972f3258640a00d64083d15df https://www.encodeproject.org/files/ENCFF123YGX/@@download/ENCFF123YGX.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF697GQV bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF900YNG, ENCFF969WVY, ENCFF998GMZ 4173794 ENCODE Processing Pipeline 8b7cd1bc822ff1bba4f5025aed089f8f https://www.encodeproject.org/files/ENCFF697GQV/@@download/ENCFF697GQV.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF273MGI bed narrowPeak conservative idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF127UZX, ENCFF599VMK, ENCFF697GQV 35662 ENCODE Processing Pipeline b75b69e6df9cdfc3fe4fcdf6ed4e2874 https://www.encodeproject.org/files/ENCFF273MGI/@@download/ENCFF273MGI.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF841YFF bed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF127UZX, ENCFF599VMK, ENCFF697GQV 37252 ENCODE Processing Pipeline fbccfe352a1f49d06bfa09b7f2ff0116 https://www.encodeproject.org/files/ENCFF841YFF/@@download/ENCFF841YFF.bed.gz hg19 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF545JVD bed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YGX, ENCFF201CUI, ENCFF419RSJ, ENCFF544MLF 40880 ENCODE Processing Pipeline a891a9fda490ce3ed55772f7fbfc5a79 https://www.encodeproject.org/files/ENCFF545JVD/@@download/ENCFF545JVD.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF443IZC bed narrowPeak conservative idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YGX, ENCFF201CUI, ENCFF419RSJ, ENCFF544MLF 38081 ENCODE Processing Pipeline c1832bbd8257a431b9bf48d8c2f79fbe https://www.encodeproject.org/files/ENCFF443IZC/@@download/ENCFF443IZC.bed.gz GRCh38 released biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF688JRI bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF834TUP, ENCFF974JDO 6894888 ENCODE Processing Pipeline 793d3c3aaad36a9eb226e1d4420a0d34 https://www.encodeproject.org/files/ENCFF688JRI/@@download/ENCFF688JRI.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF071TPY bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF160VXC, ENCFF720ZIN 6730526 ENCODE Processing Pipeline ed84f45cddfdff51c39de9b315cdc819 https://www.encodeproject.org/files/ENCFF071TPY/@@download/ENCFF071TPY.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF854NST bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF160VXC, ENCFF720ZIN, ENCFF834TUP, ENCFF974JDO 7193210 ENCODE Processing Pipeline f3fb390effebfb531d644a18850a92db https://www.encodeproject.org/files/ENCFF854NST/@@download/ENCFF854NST.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF737LSF bed narrowPeak conservative idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF071TPY, ENCFF688JRI, ENCFF854NST 14648 ENCODE Processing Pipeline 3f76160de1dba2a9f3ec67dfacbcd6fd https://www.encodeproject.org/files/ENCFF737LSF/@@download/ENCFF737LSF.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF698MLW bed narrowPeak optimal idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF071TPY, ENCFF688JRI, ENCFF854NST 36732 ENCODE Processing Pipeline feaff44cd5137aa6ef07a5d4c399875b https://www.encodeproject.org/files/ENCFF698MLW/@@download/ENCFF698MLW.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF672WCV bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF304KSV, ENCFF373YTD 7187681 ENCODE Processing Pipeline 856e501a78742acacf39db62fc23c2b3 https://www.encodeproject.org/files/ENCFF672WCV/@@download/ENCFF672WCV.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF402HHJ bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF304KSV 6602763 ENCODE Processing Pipeline 4861b3eeda09c00652d15bfbc4418fc7 https://www.encodeproject.org/files/ENCFF402HHJ/@@download/ENCFF402HHJ.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF343TGD bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF373YTD 6812592 ENCODE Processing Pipeline 7ba72f5ecc31190a4a34e20ed7a6cb6b https://www.encodeproject.org/files/ENCFF343TGD/@@download/ENCFF343TGD.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF082RIZ bed narrowPeak optimal idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF343TGD, ENCFF402HHJ, ENCFF419RSJ, ENCFF672WCV 35445 ENCODE Processing Pipeline 43264cb78152663aa4e31c68033a0126 https://www.encodeproject.org/files/ENCFF082RIZ/@@download/ENCFF082RIZ.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF438FCN bed narrowPeak conservative idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF343TGD, ENCFF402HHJ, ENCFF419RSJ, ENCFF672WCV 14449 ENCODE Processing Pipeline e3af8a54113109071b12162a28f7259d https://www.encodeproject.org/files/ENCFF438FCN/@@download/ENCFF438FCN.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF621DBO bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF364SJK, ENCFF720AUK, ENCFF796JTX 6075905 ENCODE Processing Pipeline 803ab312bbf60f761aa6ffa655ae3a85 https://www.encodeproject.org/files/ENCFF621DBO/@@download/ENCFF621DBO.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF058MIV bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF364SJK, ENCFF611PXX, ENCFF720AUK, ENCFF796JTX 7020037 ENCODE Processing Pipeline c8bb7d8e6ff02df3f07a2e46a55cbf2b https://www.encodeproject.org/files/ENCFF058MIV/@@download/ENCFF058MIV.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF689ZOM bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF611PXX, ENCFF720AUK, ENCFF796JTX 6365495 ENCODE Processing Pipeline 4b21d147c72232e8e00388e6e9fb8a28 https://www.encodeproject.org/files/ENCFF689ZOM/@@download/ENCFF689ZOM.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF443TUR bed narrowPeak conservative idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF058MIV, ENCFF419RSJ, ENCFF621DBO, ENCFF689ZOM 17608 ENCODE Processing Pipeline 1529c8c190aa22eaf4339f61d5a577c7 https://www.encodeproject.org/files/ENCFF443TUR/@@download/ENCFF443TUR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF765NAN bed narrowPeak optimal idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF058MIV, ENCFF419RSJ, ENCFF621DBO, ENCFF689ZOM 26015 ENCODE Processing Pipeline 7adb246f7f66d376afbf4f862b272fbc https://www.encodeproject.org/files/ENCFF765NAN/@@download/ENCFF765NAN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF996FCB bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF262CJE, ENCFF459WEJ, ENCFF506DFV 6072101 ENCODE Processing Pipeline 6a573d9edf0d948d5d9e9723b9b2c238 https://www.encodeproject.org/files/ENCFF996FCB/@@download/ENCFF996FCB.bed.gz hg19 released mild to moderate bottlenecking ENCFF113ZZY bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF926PMG 6362678 ENCODE Processing Pipeline 00f61c261bb370338c498caa0b167c0f https://www.encodeproject.org/files/ENCFF113ZZY/@@download/ENCFF113ZZY.bed.gz hg19 released mild to moderate bottlenecking ENCFF837QWL bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF262CJE, ENCFF459WEJ, ENCFF506DFV, ENCFF926PMG 7014363 ENCODE Processing Pipeline 9eb17206026c620ac90dc15fe407e37f https://www.encodeproject.org/files/ENCFF837QWL/@@download/ENCFF837QWL.bed.gz hg19 released mild to moderate bottlenecking ENCFF547KFA bed narrowPeak conservative idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF113ZZY, ENCFF837QWL, ENCFF996FCB 17860 ENCODE Processing Pipeline 0f34fc97d6b1cdb9ff9fef2b0edc9593 https://www.encodeproject.org/files/ENCFF547KFA/@@download/ENCFF547KFA.bed.gz hg19 released mild to moderate bottlenecking ENCFF809YFY bed narrowPeak optimal idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF113ZZY, ENCFF837QWL, ENCFF996FCB 26422 ENCODE Processing Pipeline 853ae621eda61d33788aa4e3acaa8aba https://www.encodeproject.org/files/ENCFF809YFY/@@download/ENCFF809YFY.bed.gz hg19 released mild to moderate bottlenecking ENCFF002CMW bed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 255495 ENCODE Consortium Analysis Working Group ac07a1c66425f00441835fc502af0c71 https://www.encodeproject.org/files/ENCFF002CMW/@@download/ENCFF002CMW.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF381ZVE bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF651HPM, ENCFF772PJM 3454051 ENCODE Processing Pipeline f078899340498ea6c7478561f691dc3f https://www.encodeproject.org/files/ENCFF381ZVE/@@download/ENCFF381ZVE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF371NVU bed narrowPeak conservative idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100YJH, ENCFF203XPP, ENCFF381ZVE, ENCFF419RSJ 79747 ENCODE Processing Pipeline 629c951b387e804bb8e8dff059b38051 https://www.encodeproject.org/files/ENCFF371NVU/@@download/ENCFF371NVU.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF203XPP bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044TAL, ENCFF651HPM, ENCFF772PJM 4446136 ENCODE Processing Pipeline ea2672c46404418e5d6d7a259ed4b96e https://www.encodeproject.org/files/ENCFF203XPP/@@download/ENCFF203XPP.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF100YJH bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044TAL, ENCFF772PJM 1789536 ENCODE Processing Pipeline fbf283ba506834372e630238b384c39e https://www.encodeproject.org/files/ENCFF100YJH/@@download/ENCFF100YJH.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF953BTB bed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100YJH, ENCFF203XPP, ENCFF381ZVE, ENCFF419RSJ 274304 ENCODE Processing Pipeline 5e0d8c3af8f5ee9de64681feb5dc4bfe https://www.encodeproject.org/files/ENCFF953BTB/@@download/ENCFF953BTB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, insufficient replicate concordance ENCFF002CLT bed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 223604 ENCODE Consortium Analysis Working Group be3ab73eefd11e9244d32e5ff3f9e878 https://www.encodeproject.org/files/ENCFF002CLT/@@download/ENCFF002CLT.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF036DBK bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF454MMY 1665736 ENCODE Processing Pipeline 3fce9268c8cc973914edfc7dd81b2b3f https://www.encodeproject.org/files/ENCFF036DBK/@@download/ENCFF036DBK.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF943BRX bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310MOR 3851100 ENCODE Processing Pipeline d02cbd0eb2e02c428d530666e0d72eb9 https://www.encodeproject.org/files/ENCFF943BRX/@@download/ENCFF943BRX.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF081QMM bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310MOR, ENCFF454MMY 4200248 ENCODE Processing Pipeline 757833ea1c24a80ef783e81e28aa707b https://www.encodeproject.org/files/ENCFF081QMM/@@download/ENCFF081QMM.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF653WEF bed narrowPeak conservative idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036DBK, ENCFF081QMM, ENCFF419RSJ, ENCFF943BRX 177236 ENCODE Processing Pipeline de17ec2cde176b415fa6a7cade839301 https://www.encodeproject.org/files/ENCFF653WEF/@@download/ENCFF653WEF.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF678TFE bed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036DBK, ENCFF081QMM, ENCFF419RSJ, ENCFF943BRX 217116 ENCODE Processing Pipeline 52cf0413173f65ad29804dc0a8b17381 https://www.encodeproject.org/files/ENCFF678TFE/@@download/ENCFF678TFE.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF001VNQ bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1146115 Michael Snyder, Stanford b2475dc323cf53adefd969fd6e10afd0 https://www.encodeproject.org/files/ENCFF001VNQ/@@download/ENCFF001VNQ.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CXB bed narrowPeak optimal idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 556411 ENCODE Consortium Analysis Working Group 184a4a65c0bd447f90055b014d4e2e95 https://www.encodeproject.org/files/ENCFF002CXB/@@download/ENCFF002CXB.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF700ZVY bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF589IXE 5052256 ENCODE Processing Pipeline 89bdbc2aff23aae9a97dff9663253dcb https://www.encodeproject.org/files/ENCFF700ZVY/@@download/ENCFF700ZVY.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF389AAK bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF097GYE, ENCFF589IXE 3444253 ENCODE Processing Pipeline 8e442cd36eb622dab93c07ab0b8b16d6 https://www.encodeproject.org/files/ENCFF389AAK/@@download/ENCFF389AAK.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF283WGH bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF097GYE 4575718 ENCODE Processing Pipeline 2a5f6935885c2b6e0d3da5174087d484 https://www.encodeproject.org/files/ENCFF283WGH/@@download/ENCFF283WGH.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF003UXM bed narrowPeak conservative idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF283WGH, ENCFF389AAK, ENCFF419RSJ, ENCFF700ZVY 378843 ENCODE Processing Pipeline 74de2195b5e8f82942feadb41018b9d1 https://www.encodeproject.org/files/ENCFF003UXM/@@download/ENCFF003UXM.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF498MGH bed narrowPeak optimal idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF283WGH, ENCFF389AAK, ENCFF419RSJ, ENCFF700ZVY 448897 ENCODE Processing Pipeline 46e06647fc96ac749c5a5de3d3cbce49 https://www.encodeproject.org/files/ENCFF498MGH/@@download/ENCFF498MGH.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF001VON bed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 692673 Michael Snyder, Stanford ae84b26b09857dfc02444fcf70734f7e https://www.encodeproject.org/files/ENCFF001VON/@@download/ENCFF001VON.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF002CXV bed narrowPeak optimal idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 58297 ENCODE Consortium Analysis Working Group 84fc3a4909c0a97058659fbe659e0f55 https://www.encodeproject.org/files/ENCFF002CXV/@@download/ENCFF002CXV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF001VMO bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 350531 Michael Snyder, Stanford e66b2414940814db9b3349c7870d8629 https://www.encodeproject.org/files/ENCFF001VMO/@@download/ENCFF001VMO.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF893YYD bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF014UUB 5228944 ENCODE Processing Pipeline 95259a286a0a8358008c223187239071 https://www.encodeproject.org/files/ENCFF893YYD/@@download/ENCFF893YYD.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF283XPJ bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF014UUB, ENCFF924CYX 5555132 ENCODE Processing Pipeline 719c93766b8b27b1d92f3a5466fad215 https://www.encodeproject.org/files/ENCFF283XPJ/@@download/ENCFF283XPJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF543MHK bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF924CYX 4246322 ENCODE Processing Pipeline 7ee72642b31d088f8dcf6eddce06bd86 https://www.encodeproject.org/files/ENCFF543MHK/@@download/ENCFF543MHK.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF905NMP bed narrowPeak conservative idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF283XPJ, ENCFF419RSJ, ENCFF543MHK, ENCFF893YYD 323656 ENCODE Processing Pipeline 7f529c720d838d577a0be11df6b0d4b0 https://www.encodeproject.org/files/ENCFF905NMP/@@download/ENCFF905NMP.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF394CEC bed narrowPeak optimal idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF283XPJ, ENCFF419RSJ, ENCFF543MHK, ENCFF893YYD 386163 ENCODE Processing Pipeline a4d1eaceaadf0a4371abbf9afa089c69 https://www.encodeproject.org/files/ENCFF394CEC/@@download/ENCFF394CEC.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF231HME bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF227IZS, ENCFF516TOF 6500271 ENCODE Processing Pipeline ba17e5819f3161a36760a3921a55a2ce https://www.encodeproject.org/files/ENCFF231HME/@@download/ENCFF231HME.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF912LXU bed narrowPeak optimal idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF231HME, ENCFF269WSX, ENCFF378QNO, ENCFF419RSJ 512986 ENCODE Processing Pipeline 5b1fd7afd9bf8cc4eff806045deca8bb https://www.encodeproject.org/files/ENCFF912LXU/@@download/ENCFF912LXU.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF378QNO bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF715AOC, ENCFF910IKB 6638817 ENCODE Processing Pipeline ef56fc5c6e73b279a71c35e457c43adf https://www.encodeproject.org/files/ENCFF378QNO/@@download/ENCFF378QNO.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF269WSX bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF227IZS, ENCFF516TOF, ENCFF715AOC, ENCFF910IKB 7189263 ENCODE Processing Pipeline b8d08fd262f954af88176d3acfb3a58b https://www.encodeproject.org/files/ENCFF269WSX/@@download/ENCFF269WSX.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF619AEN bed narrowPeak conservative idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF231HME, ENCFF269WSX, ENCFF378QNO, ENCFF419RSJ 404912 ENCODE Processing Pipeline 63061bf463563b29a07f88d089140ed8 https://www.encodeproject.org/files/ENCFF619AEN/@@download/ENCFF619AEN.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF870JMX bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF581ZJL, ENCFF795XNL 6627135 ENCODE Processing Pipeline 1936337eec37b48544e0fc591363ca1b https://www.encodeproject.org/files/ENCFF870JMX/@@download/ENCFF870JMX.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF493TZM bed narrowPeak optimal idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF001TDO, ENCFF334SEU, ENCFF337ISL, ENCFF870JMX 509065 ENCODE Processing Pipeline 3683eb367b6ea3aaab2799d3a4abd218 https://www.encodeproject.org/files/ENCFF493TZM/@@download/ENCFF493TZM.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF337ISL bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF051LWI, ENCFF316QXZ 6500158 ENCODE Processing Pipeline ea9c81a1b970ba86b392f3154ebd0115 https://www.encodeproject.org/files/ENCFF337ISL/@@download/ENCFF337ISL.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF334SEU bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF051LWI, ENCFF316QXZ, ENCFF581ZJL, ENCFF795XNL 7187022 ENCODE Processing Pipeline 972dd524ce2b7557d282612e7c086b19 https://www.encodeproject.org/files/ENCFF334SEU/@@download/ENCFF334SEU.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF139SRI bed narrowPeak conservative idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF001TDO, ENCFF334SEU, ENCFF337ISL, ENCFF870JMX 402824 ENCODE Processing Pipeline 603c30db2124ed38ab65a75b2e2e15ff https://www.encodeproject.org/files/ENCFF139SRI/@@download/ENCFF139SRI.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF506NOD bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF051LWI, ENCFF550WAC, ENCFF581ZJL, ENCFF928QMZ 7275360 ENCODE Processing Pipeline c178623e46132c76c087e31697e4ed93 https://www.encodeproject.org/files/ENCFF506NOD/@@download/ENCFF506NOD.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF857NTV bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF550WAC, ENCFF581ZJL 6990705 ENCODE Processing Pipeline 617eaae881c4775bf7fd5dc6206f45ee https://www.encodeproject.org/files/ENCFF857NTV/@@download/ENCFF857NTV.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF421AHE bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF051LWI, ENCFF928QMZ 6940783 ENCODE Processing Pipeline d9a685d1a9a7318f8cf381bc3d015eae https://www.encodeproject.org/files/ENCFF421AHE/@@download/ENCFF421AHE.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF603XZK bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF178YFO 6927877 ENCODE Processing Pipeline 36b8c7cd13d10baceb9a58ad7471d749 https://www.encodeproject.org/files/ENCFF603XZK/@@download/ENCFF603XZK.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF679IOJ bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF933HFV 6848573 ENCODE Processing Pipeline 42c05d61a0799d25bb3ad75159e9d20d https://www.encodeproject.org/files/ENCFF679IOJ/@@download/ENCFF679IOJ.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF301GRS bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF178YFO, ENCFF933HFV 7284109 ENCODE Processing Pipeline a84ff89403f47143d927750e9c403320 https://www.encodeproject.org/files/ENCFF301GRS/@@download/ENCFF301GRS.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF299RMS bed narrowPeak conservative idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF301GRS, ENCFF419RSJ, ENCFF603XZK, ENCFF679IOJ 266835 ENCODE Processing Pipeline 0fe7820c4a43c2aa9d5e35c8ef76f085 https://www.encodeproject.org/files/ENCFF299RMS/@@download/ENCFF299RMS.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF134HQP bed narrowPeak optimal idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF301GRS, ENCFF419RSJ, ENCFF603XZK, ENCFF679IOJ 406585 ENCODE Processing Pipeline d1c621345daf570dd43b3bae98baef6a https://www.encodeproject.org/files/ENCFF134HQP/@@download/ENCFF134HQP.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF595DQM bed narrowPeak conservative idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF001TDO, ENCFF421AHE, ENCFF506NOD, ENCFF857NTV 218424 ENCODE Processing Pipeline 1083898528ab82914392c5ec47f1d0a9 https://www.encodeproject.org/files/ENCFF595DQM/@@download/ENCFF595DQM.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF659WAF bed narrowPeak optimal idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF001TDO, ENCFF421AHE, ENCFF506NOD, ENCFF857NTV 338164 ENCODE Processing Pipeline 17a9dcb21ebd4ab5fd04becd0fe896f9 https://www.encodeproject.org/files/ENCFF659WAF/@@download/ENCFF659WAF.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF370TMY bed narrowPeak peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF154OCS, ENCFF581ZJL, ENCFF805PPB 7260821 ENCODE Processing Pipeline c03405433ae1ff839848d09cd849d51f https://www.encodeproject.org/files/ENCFF370TMY/@@download/ENCFF370TMY.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF548XDN bed narrowPeak peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 1 ENCFF581ZJL, ENCFF805PPB 6536861 ENCODE Processing Pipeline d1a403f9af88d01d1beb2a36217dbcc9 https://www.encodeproject.org/files/ENCFF548XDN/@@download/ENCFF548XDN.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF104IYR bed narrowPeak peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF154OCS 7111369 ENCODE Processing Pipeline 42ed9fc810335bdc3f33ff52de0a897e https://www.encodeproject.org/files/ENCFF104IYR/@@download/ENCFF104IYR.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF199DDB bed narrowPeak conservative idr thresholded peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF104IYR, ENCFF370TMY, ENCFF548XDN 247702 ENCODE Processing Pipeline 42dc520d6cc8746c0dfb116e8e13c9ad https://www.encodeproject.org/files/ENCFF199DDB/@@download/ENCFF199DDB.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF906PGD bed narrowPeak optimal idr thresholded peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF104IYR, ENCFF370TMY, ENCFF548XDN 333562 ENCODE Processing Pipeline 1b3b69fc44e232cb151f753a73154afd https://www.encodeproject.org/files/ENCFF906PGD/@@download/ENCFF906PGD.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF185ACS bed narrowPeak peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 1 ENCFF887MQT, ENCFF910IKB 6366670 ENCODE Processing Pipeline 507dae7fa449763701d0f4d19547096c https://www.encodeproject.org/files/ENCFF185ACS/@@download/ENCFF185ACS.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF495XGA bed narrowPeak peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 2 ENCFF227IZS, ENCFF543IWP 7057441 ENCODE Processing Pipeline 73bb9112addb5c2b6a49d941aab19547 https://www.encodeproject.org/files/ENCFF495XGA/@@download/ENCFF495XGA.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF632SXM bed narrowPeak peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 1, 2 ENCFF227IZS, ENCFF543IWP, ENCFF887MQT, ENCFF910IKB 7260769 ENCODE Processing Pipeline 89e6b767744f87e9cdd9ddf069490809 https://www.encodeproject.org/files/ENCFF632SXM/@@download/ENCFF632SXM.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF287RKT bed narrowPeak conservative idr thresholded peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 1, 2 ENCFF185ACS, ENCFF419RSJ, ENCFF495XGA, ENCFF632SXM 248619 ENCODE Processing Pipeline 9f3c3a6cd600d6715ced39ca55b10f40 https://www.encodeproject.org/files/ENCFF287RKT/@@download/ENCFF287RKT.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF520QSR bed narrowPeak optimal idr thresholded peaks ENCSR331BDJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NKRF-human ENCAB893CIV DNA False 2016-09-01 ENCODE 1, 2 ENCFF185ACS, ENCFF419RSJ, ENCFF495XGA, ENCFF632SXM 338676 ENCODE Processing Pipeline 8a2bda65f1df079509a1649adf334cab https://www.encodeproject.org/files/ENCFF520QSR/@@download/ENCFF520QSR.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF610XAF bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF129ZZR, ENCFF606YNV 7171179 ENCODE Processing Pipeline 6999350ac335a593e5c0587ad900d047 https://www.encodeproject.org/files/ENCFF610XAF/@@download/ENCFF610XAF.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF374WLL bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF129ZZR, ENCFF961GDC 7054215 ENCODE Processing Pipeline 967f0bbb6d85e93bba5900e6ed6d2cf1 https://www.encodeproject.org/files/ENCFF374WLL/@@download/ENCFF374WLL.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF994BAN bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF129ZZR, ENCFF606YNV, ENCFF961GDC 7292790 ENCODE Processing Pipeline d715dcfd343638c0f4875ad654690277 https://www.encodeproject.org/files/ENCFF994BAN/@@download/ENCFF994BAN.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF503GGD bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF597WPX, ENCFF699KKU, ENCFF856EXS 7277012 ENCODE Processing Pipeline 814af0b566ca8c0167511a44b72b4b01 https://www.encodeproject.org/files/ENCFF503GGD/@@download/ENCFF503GGD.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF741ZBS bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF699KKU, ENCFF856EXS 7089362 ENCODE Processing Pipeline 760c81a25c5058c1e7be71b39d5673de https://www.encodeproject.org/files/ENCFF741ZBS/@@download/ENCFF741ZBS.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF749UHD bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF597WPX, ENCFF699KKU 6984469 ENCODE Processing Pipeline c702826f7689819915155aa2899f8b76 https://www.encodeproject.org/files/ENCFF749UHD/@@download/ENCFF749UHD.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF284LYU bed narrowPeak conservative idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF503GGD, ENCFF741ZBS, ENCFF749UHD 670953 ENCODE Processing Pipeline dc744c53c76c7e3a9be9f2a76b9851d3 https://www.encodeproject.org/files/ENCFF284LYU/@@download/ENCFF284LYU.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF789AXP bed narrowPeak optimal idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF503GGD, ENCFF741ZBS, ENCFF749UHD 816401 ENCODE Processing Pipeline a28872ad6becf37b3551dfc454e2ae70 https://www.encodeproject.org/files/ENCFF789AXP/@@download/ENCFF789AXP.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF978GHB bed narrowPeak conservative idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF374WLL, ENCFF610XAF, ENCFF994BAN 581418 ENCODE Processing Pipeline c21f4e72839e1631cf4753dbcd32d199 https://www.encodeproject.org/files/ENCFF978GHB/@@download/ENCFF978GHB.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF254YOX bed narrowPeak optimal idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF374WLL, ENCFF610XAF, ENCFF994BAN 707639 ENCODE Processing Pipeline f34791c66a2d02e2f42717a679cb9573 https://www.encodeproject.org/files/ENCFF254YOX/@@download/ENCFF254YOX.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF717LPP bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF177GKX, ENCFF435MFF, ENCFF643FQM, ENCFF993VCM 6500240 ENCODE Processing Pipeline 799c63de5103084b0dcc2eaf038ca545 https://www.encodeproject.org/files/ENCFF717LPP/@@download/ENCFF717LPP.bed.gz hg19 released borderline replicate concordance, low read length missing unfiltered alignments, mismatched status insufficient read depth ENCFF154OXO bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF177GKX, ENCFF435MFF 4379244 ENCODE Processing Pipeline d7cfe7aef02f66eff3fb9963dc498f08 https://www.encodeproject.org/files/ENCFF154OXO/@@download/ENCFF154OXO.bed.gz hg19 released borderline replicate concordance, low read length missing unfiltered alignments, mismatched status insufficient read depth ENCFF854MYR bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF643FQM, ENCFF993VCM 4537557 ENCODE Processing Pipeline 1e2a4cacc1678a09807e7bd6b4304764 https://www.encodeproject.org/files/ENCFF854MYR/@@download/ENCFF854MYR.bed.gz hg19 released borderline replicate concordance, low read length missing unfiltered alignments, mismatched status insufficient read depth ENCFF625GTG bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF569XLF, ENCFF584ERB 4624336 ENCODE Processing Pipeline 38784bcb4704d1e781645370db6ab6bc https://www.encodeproject.org/files/ENCFF625GTG/@@download/ENCFF625GTG.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments, mismatched status insufficient read depth ENCFF777DYL bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF092OLM, ENCFF824KAR 3975684 ENCODE Processing Pipeline 336e3c4c1e28e0ee41ba0e5b6060be76 https://www.encodeproject.org/files/ENCFF777DYL/@@download/ENCFF777DYL.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments, mismatched status insufficient read depth ENCFF710JTQ bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF092OLM, ENCFF569XLF, ENCFF584ERB, ENCFF824KAR 5944108 ENCODE Processing Pipeline e00c45c4475fa4d14715b7f29ed2735e https://www.encodeproject.org/files/ENCFF710JTQ/@@download/ENCFF710JTQ.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments, mismatched status insufficient read depth ENCFF512CXE bed narrowPeak conservative idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF625GTG, ENCFF710JTQ, ENCFF777DYL 753 ENCODE Processing Pipeline a01eb719850f7fb678dd4ac41b01e22e https://www.encodeproject.org/files/ENCFF512CXE/@@download/ENCFF512CXE.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments, mismatched status insufficient read depth ENCFF416DAC bed narrowPeak optimal idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF625GTG, ENCFF710JTQ, ENCFF777DYL 1017 ENCODE Processing Pipeline 5008782c3093bb9cfcc4a80c1d713e88 https://www.encodeproject.org/files/ENCFF416DAC/@@download/ENCFF416DAC.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments, mismatched status insufficient read depth ENCFF036XUT bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF391CGQ, ENCFF839YOM 5615415 ENCODE Processing Pipeline 8ec609e5c76e3654b83a78aa48ca28df https://www.encodeproject.org/files/ENCFF036XUT/@@download/ENCFF036XUT.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF203RIX bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF092ACZ, ENCFF892CVA 6101217 ENCODE Processing Pipeline 2b667f7cea970efbae93119444958cfc https://www.encodeproject.org/files/ENCFF203RIX/@@download/ENCFF203RIX.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF376GWL bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF092ACZ, ENCFF391CGQ, ENCFF839YOM, ENCFF892CVA 7028925 ENCODE Processing Pipeline 6d7659075d867d6b71f53e8a00bea550 https://www.encodeproject.org/files/ENCFF376GWL/@@download/ENCFF376GWL.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF157SQN bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF812KIP 5841730 ENCODE Processing Pipeline effa89adbba74efcd57568b3796df7c9 https://www.encodeproject.org/files/ENCFF157SQN/@@download/ENCFF157SQN.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF246VDU bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF011XRF 5331491 ENCODE Processing Pipeline 547153566bb601110b982ec6211d9a1b https://www.encodeproject.org/files/ENCFF246VDU/@@download/ENCFF246VDU.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF560AQD bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF011XRF, ENCFF812KIP 6903840 ENCODE Processing Pipeline e6f01f1ac4b374a039812285aca29452 https://www.encodeproject.org/files/ENCFF560AQD/@@download/ENCFF560AQD.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF049YPY bed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF157SQN, ENCFF246VDU, ENCFF419RSJ, ENCFF560AQD 56619 ENCODE Processing Pipeline 29a3ffe5a110a514e48acc2db47dcc5e https://www.encodeproject.org/files/ENCFF049YPY/@@download/ENCFF049YPY.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF091MQJ bed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF157SQN, ENCFF246VDU, ENCFF419RSJ, ENCFF560AQD 66220 ENCODE Processing Pipeline 5c2f1d696ec866604a2f43624f6b8839 https://www.encodeproject.org/files/ENCFF091MQJ/@@download/ENCFF091MQJ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF693TKE bed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF036XUT, ENCFF203RIX, ENCFF376GWL 47781 ENCODE Processing Pipeline 9d336ceb18616e24ae5b0a2ef5bf40f6 https://www.encodeproject.org/files/ENCFF693TKE/@@download/ENCFF693TKE.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF820QQB bed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF036XUT, ENCFF203RIX, ENCFF376GWL 62557 ENCODE Processing Pipeline 43b076b85a81a461a35791d676746a2a https://www.encodeproject.org/files/ENCFF820QQB/@@download/ENCFF820QQB.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF002CLQ bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 466076 ENCODE Consortium Analysis Working Group 3995b6b545fecf8ce9fe78928e2563f5 https://www.encodeproject.org/files/ENCFF002CLQ/@@download/ENCFF002CLQ.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF831QNI bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF725HAK 6882452 ENCODE Processing Pipeline b636262d4059d2227749aab51878ac9d https://www.encodeproject.org/files/ENCFF831QNI/@@download/ENCFF831QNI.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF653UJT bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF045NWB, ENCFF522HDC 6103983 ENCODE Processing Pipeline 7384bf8990c218b47cac769d4470c370 https://www.encodeproject.org/files/ENCFF653UJT/@@download/ENCFF653UJT.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF064WFD bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF045NWB, ENCFF522HDC, ENCFF725HAK 7028966 ENCODE Processing Pipeline 2671d55a6b2309c18e827d8b9a49f29b https://www.encodeproject.org/files/ENCFF064WFD/@@download/ENCFF064WFD.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF692KUW bed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF064WFD, ENCFF653UJT, ENCFF831QNI 325281 ENCODE Processing Pipeline acb123ed11f022aff111eecf80eaa575 https://www.encodeproject.org/files/ENCFF692KUW/@@download/ENCFF692KUW.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF455TDM bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF064WFD, ENCFF653UJT, ENCFF831QNI 465905 ENCODE Processing Pipeline 5c2ed80d53a4008c80594b13b59766fa https://www.encodeproject.org/files/ENCFF455TDM/@@download/ENCFF455TDM.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF469CQE bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF093QMN, ENCFF289RGM, ENCFF836OEO 7033869 ENCODE Processing Pipeline 9459d9e7a6ba5c6e5c9e13420d233016 https://www.encodeproject.org/files/ENCFF469CQE/@@download/ENCFF469CQE.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF848QNF bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF289RGM, ENCFF836OEO 6843039 ENCODE Processing Pipeline c6395b38e2eb101a6a1b18372a817f7f https://www.encodeproject.org/files/ENCFF848QNF/@@download/ENCFF848QNF.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF275XNU bed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF469CQE, ENCFF725LHJ, ENCFF848QNF 325309 ENCODE Processing Pipeline 11a6b527fa4aa0a41993ef20d1def353 https://www.encodeproject.org/files/ENCFF275XNU/@@download/ENCFF275XNU.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF951BQB bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF469CQE, ENCFF725LHJ, ENCFF848QNF 466486 ENCODE Processing Pipeline a7402798ec5e5c167abce02eb04f525f https://www.encodeproject.org/files/ENCFF951BQB/@@download/ENCFF951BQB.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF725LHJ bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF093QMN, ENCFF836OEO 6076313 ENCODE Processing Pipeline 9330733615eb556207191e4d69257d4f https://www.encodeproject.org/files/ENCFF725LHJ/@@download/ENCFF725LHJ.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF001VPL bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1294981 Michael Snyder, Stanford 259dc65d0d017eadee8cce89dddddf24 https://www.encodeproject.org/files/ENCFF001VPL/@@download/ENCFF001VPL.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CYR bed narrowPeak optimal idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 686281 ENCODE Consortium Analysis Working Group 0a9d8e90c7bf4abb3e7a2e3320eba6b3 https://www.encodeproject.org/files/ENCFF002CYR/@@download/ENCFF002CYR.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF912GFX bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF975ZXB 5230461 ENCODE Processing Pipeline 1dff45d0100d976f37a77ff96ab1320a https://www.encodeproject.org/files/ENCFF912GFX/@@download/ENCFF912GFX.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF493ZHZ bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF682XGC 4770260 ENCODE Processing Pipeline dfd0acc6803913c793fc368c546744d7 https://www.encodeproject.org/files/ENCFF493ZHZ/@@download/ENCFF493ZHZ.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF086USH bed narrowPeak conservative idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256RXW, ENCFF419RSJ, ENCFF493ZHZ, ENCFF912GFX 418038 ENCODE Processing Pipeline 5d148ece198c9a75d566251b85914259 https://www.encodeproject.org/files/ENCFF086USH/@@download/ENCFF086USH.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF256RXW bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF682XGC, ENCFF975ZXB 2860111 ENCODE Processing Pipeline 3b2de140ca940de34b8947c6639fea71 https://www.encodeproject.org/files/ENCFF256RXW/@@download/ENCFF256RXW.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF700GZI bed narrowPeak optimal idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256RXW, ENCFF419RSJ, ENCFF493ZHZ, ENCFF912GFX 506955 ENCODE Processing Pipeline 0763f9b615cf96f8212332eb4a11703f https://www.encodeproject.org/files/ENCFF700GZI/@@download/ENCFF700GZI.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF001VNB bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 359741 Michael Snyder, Stanford 13deddbf404a44f36b3ff0779b88f209 https://www.encodeproject.org/files/ENCFF001VNB/@@download/ENCFF001VNB.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample, NTR biosample ENCFF002CWO bed narrowPeak optimal idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 71329 ENCODE Consortium Analysis Working Group 512f15c00d79972570f34a368bb388d7 https://www.encodeproject.org/files/ENCFF002CWO/@@download/ENCFF002CWO.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample, NTR biosample ENCFF527ABX bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF865ISL 4509736 ENCODE Processing Pipeline 66eefbd3751f3d1402300be2c6214cbb https://www.encodeproject.org/files/ENCFF527ABX/@@download/ENCFF527ABX.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample ENCFF453ZWL bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF554BLC, ENCFF865ISL 5324611 ENCODE Processing Pipeline 12e35e15b4a5b53ffbf56298ee356030 https://www.encodeproject.org/files/ENCFF453ZWL/@@download/ENCFF453ZWL.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample ENCFF382JSK bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF554BLC 4589062 ENCODE Processing Pipeline f115a49b163b4a1f690e46e00603fe40 https://www.encodeproject.org/files/ENCFF382JSK/@@download/ENCFF382JSK.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample ENCFF119SCQ bed narrowPeak optimal idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF382JSK, ENCFF419RSJ, ENCFF453ZWL, ENCFF527ABX 72970 ENCODE Processing Pipeline d5791bd9656128411f3090b76911951b https://www.encodeproject.org/files/ENCFF119SCQ/@@download/ENCFF119SCQ.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample ENCFF408WSW bed narrowPeak conservative idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF382JSK, ENCFF419RSJ, ENCFF453ZWL, ENCFF527ABX 68263 ENCODE Processing Pipeline 2708307466f54122c6613b2fe38486ec https://www.encodeproject.org/files/ENCFF408WSW/@@download/ENCFF408WSW.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample, NTR biosample ENCFF001VMU bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1199066 Michael Snyder, Stanford 41b1b33137420093e34f6c6f25dd363a https://www.encodeproject.org/files/ENCFF001VMU/@@download/ENCFF001VMU.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CWH bed narrowPeak optimal idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 521895 ENCODE Consortium Analysis Working Group 2afcc7647009b98a31ef5cc965732f63 https://www.encodeproject.org/files/ENCFF002CWH/@@download/ENCFF002CWH.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF004CLN bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF641HZR 5554111 ENCODE Processing Pipeline 665761ec4367656e32586b2c6d7c1713 https://www.encodeproject.org/files/ENCFF004CLN/@@download/ENCFF004CLN.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF836QWS bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF006GQZ, ENCFF023NGN, ENCFF641HZR 6255792 ENCODE Processing Pipeline 0cf01b14e16bfe90fe5d4914f798e8bf https://www.encodeproject.org/files/ENCFF836QWS/@@download/ENCFF836QWS.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF330UQJ bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF006GQZ, ENCFF023NGN 5530719 ENCODE Processing Pipeline 41bde4653f2806c740b0840f02a38a2a https://www.encodeproject.org/files/ENCFF330UQJ/@@download/ENCFF330UQJ.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF196VRG bed narrowPeak conservative idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF004CLN, ENCFF330UQJ, ENCFF419RSJ, ENCFF836QWS 515296 ENCODE Processing Pipeline 9affd13d5e0cf7e47ddf6b1d0d6a80f9 https://www.encodeproject.org/files/ENCFF196VRG/@@download/ENCFF196VRG.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF492XUU bed narrowPeak optimal idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF004CLN, ENCFF330UQJ, ENCFF419RSJ, ENCFF836QWS 530950 ENCODE Processing Pipeline de1e6fbb2410c41327714236770bd01e https://www.encodeproject.org/files/ENCFF492XUU/@@download/ENCFF492XUU.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF214PFV bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF072EMM, ENCFF581ZJL 6498662 ENCODE Processing Pipeline 3f11270a3c900c60b30b8dba11743b2a https://www.encodeproject.org/files/ENCFF214PFV/@@download/ENCFF214PFV.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF277IZH bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF581KEJ 6638468 ENCODE Processing Pipeline 36d9bfe21968a5410a8c3ac308937f8d https://www.encodeproject.org/files/ENCFF277IZH/@@download/ENCFF277IZH.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF898TYH bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF072EMM, ENCFF581KEJ, ENCFF581ZJL 7171522 ENCODE Processing Pipeline 70feaec10f89eef19f742fbc30a0c91b https://www.encodeproject.org/files/ENCFF898TYH/@@download/ENCFF898TYH.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF300XAN bed narrowPeak conservative idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF214PFV, ENCFF277IZH, ENCFF898TYH 22178 ENCODE Processing Pipeline 66e09f01191216e74310e8f01ff790e2 https://www.encodeproject.org/files/ENCFF300XAN/@@download/ENCFF300XAN.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF246HIU bed narrowPeak optimal idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF214PFV, ENCFF277IZH, ENCFF898TYH 51934 ENCODE Processing Pipeline 93b69ccf7b369f691b390eff17a17422 https://www.encodeproject.org/files/ENCFF246HIU/@@download/ENCFF246HIU.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF852FJH bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF910IKB, ENCFF954HWS 6427346 ENCODE Processing Pipeline 049ddc36c11ec20e75db3a609b515621 https://www.encodeproject.org/files/ENCFF852FJH/@@download/ENCFF852FJH.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF728DGC bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF124RUL, ENCFF227IZS 6514718 ENCODE Processing Pipeline 1899c3c43f1c1fc7c67a9fe7bab302d4 https://www.encodeproject.org/files/ENCFF728DGC/@@download/ENCFF728DGC.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF880DLB bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF124RUL, ENCFF227IZS, ENCFF910IKB, ENCFF954HWS 7152682 ENCODE Processing Pipeline bc4dc45465b4b32244095fbd4219a2bc https://www.encodeproject.org/files/ENCFF880DLB/@@download/ENCFF880DLB.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF964DVU bed narrowPeak conservative idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF419RSJ, ENCFF728DGC, ENCFF852FJH, ENCFF880DLB 22607 ENCODE Processing Pipeline 0ef49881d14780b79b49be1c3596031d https://www.encodeproject.org/files/ENCFF964DVU/@@download/ENCFF964DVU.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF508WCC bed narrowPeak optimal idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF419RSJ, ENCFF728DGC, ENCFF852FJH, ENCFF880DLB 54121 ENCODE Processing Pipeline aab7dd8e8aff59499adaa07c77c9ba55 https://www.encodeproject.org/files/ENCFF508WCC/@@download/ENCFF508WCC.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF118MIQ bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF769DDY 6924357 ENCODE Processing Pipeline 754ee193f4606544cb76668109fb26e8 https://www.encodeproject.org/files/ENCFF118MIQ/@@download/ENCFF118MIQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF289CCG bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF221CPW 7079306 ENCODE Processing Pipeline 6f7c8dca19181e7bef59866421bcf054 https://www.encodeproject.org/files/ENCFF289CCG/@@download/ENCFF289CCG.bed.gz GRCh38 released missing unfiltered alignments ENCFF593YVU bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF221CPW, ENCFF769DDY 7209233 ENCODE Processing Pipeline a63254c14d64305c9c90d1f3126723ee https://www.encodeproject.org/files/ENCFF593YVU/@@download/ENCFF593YVU.bed.gz GRCh38 released missing unfiltered alignments ENCFF428RTI bed narrowPeak conservative idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF118MIQ, ENCFF289CCG, ENCFF419RSJ, ENCFF593YVU 144033 ENCODE Processing Pipeline ca643415cb59762fab086b5a51da4b48 https://www.encodeproject.org/files/ENCFF428RTI/@@download/ENCFF428RTI.bed.gz GRCh38 released missing unfiltered alignments ENCFF297WMY bed narrowPeak optimal idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF118MIQ, ENCFF289CCG, ENCFF419RSJ, ENCFF593YVU 216647 ENCODE Processing Pipeline 3606e415e91b6de4450102636c9a356a https://www.encodeproject.org/files/ENCFF297WMY/@@download/ENCFF297WMY.bed.gz GRCh38 released missing unfiltered alignments ENCFF415ZVO bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF051LWI, ENCFF073BGI, ENCFF204DQZ, ENCFF581ZJL 7200902 ENCODE Processing Pipeline 1c2c73dcaf3d5995047ec9d24c4ed272 https://www.encodeproject.org/files/ENCFF415ZVO/@@download/ENCFF415ZVO.bed.gz hg19 released missing unfiltered alignments ENCFF701JMF bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF073BGI, ENCFF581ZJL 6933666 ENCODE Processing Pipeline 1620ca7375f85882e35e913c96ae9ec5 https://www.encodeproject.org/files/ENCFF701JMF/@@download/ENCFF701JMF.bed.gz hg19 released missing unfiltered alignments ENCFF926PTQ bed narrowPeak conservative idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF328KFN, ENCFF415ZVO, ENCFF701JMF 142211 ENCODE Processing Pipeline 115d779926062d7aa719aec177231932 https://www.encodeproject.org/files/ENCFF926PTQ/@@download/ENCFF926PTQ.bed.gz hg19 released missing unfiltered alignments ENCFF328KFN bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF051LWI, ENCFF204DQZ 7070560 ENCODE Processing Pipeline d09fa112a2f46a52ff767bac569d3e8d https://www.encodeproject.org/files/ENCFF328KFN/@@download/ENCFF328KFN.bed.gz hg19 released missing unfiltered alignments ENCFF849ZUF bed narrowPeak optimal idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF328KFN, ENCFF415ZVO, ENCFF701JMF 214540 ENCODE Processing Pipeline 5889d9be33d5b555b97ac8b885edd835 https://www.encodeproject.org/files/ENCFF849ZUF/@@download/ENCFF849ZUF.bed.gz hg19 released missing unfiltered alignments ENCFF691REI bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF225IQS, ENCFF712WXB, ENCFF790TAN 7214076 ENCODE Processing Pipeline aba487b064ca0d42248f8185ff040d18 https://www.encodeproject.org/files/ENCFF691REI/@@download/ENCFF691REI.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF552EXM bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF431WVX, ENCFF712WXB 7272664 ENCODE Processing Pipeline f8e880a523f52386876cff40ca1af644 https://www.encodeproject.org/files/ENCFF552EXM/@@download/ENCFF552EXM.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF446XYW bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF225IQS, ENCFF431WVX, ENCFF712WXB, ENCFF790TAN 7315665 ENCODE Processing Pipeline 0c80bfb3dcca65c9b77c3073f3d48c63 https://www.encodeproject.org/files/ENCFF446XYW/@@download/ENCFF446XYW.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF771TNK bed narrowPeak conservative idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF446XYW, ENCFF552EXM, ENCFF691REI 881511 ENCODE Processing Pipeline 346d1e87400370765de81d3202d3c139 https://www.encodeproject.org/files/ENCFF771TNK/@@download/ENCFF771TNK.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF249TYS bed narrowPeak optimal idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF446XYW, ENCFF552EXM, ENCFF691REI 912130 ENCODE Processing Pipeline f66a6d097165ef7e610fde9a4db94da0 https://www.encodeproject.org/files/ENCFF249TYS/@@download/ENCFF249TYS.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF231SVC bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF160VXC, ENCFF503INV, ENCFF834TUP 7236685 ENCODE Processing Pipeline 627b7ac1338041ecaa9fb192e32943f6 https://www.encodeproject.org/files/ENCFF231SVC/@@download/ENCFF231SVC.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF118ZSL bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF160VXC, ENCFF503INV, ENCFF834TUP, ENCFF919XGC 7343115 ENCODE Processing Pipeline 05b1b1752d0dbbb3cab40f575ad26578 https://www.encodeproject.org/files/ENCFF118ZSL/@@download/ENCFF118ZSL.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF549JYE bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF834TUP, ENCFF919XGC 7294885 ENCODE Processing Pipeline c69725cc8f688211356ca018373a030c https://www.encodeproject.org/files/ENCFF549JYE/@@download/ENCFF549JYE.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF676SJQ bed narrowPeak conservative idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF118ZSL, ENCFF231SVC, ENCFF549JYE 886667 ENCODE Processing Pipeline c3aae66271a63c709411d06c1b21a7e8 https://www.encodeproject.org/files/ENCFF676SJQ/@@download/ENCFF676SJQ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF225MPC bed narrowPeak optimal idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF118ZSL, ENCFF231SVC, ENCFF549JYE 928168 ENCODE Processing Pipeline cfb2dc624b924c1459c00c31b9d67fff https://www.encodeproject.org/files/ENCFF225MPC/@@download/ENCFF225MPC.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF564UTR bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF873BRB, ENCFF910IKB 6966286 ENCODE Processing Pipeline ae4085d2674045c516927ad3b830905b https://www.encodeproject.org/files/ENCFF564UTR/@@download/ENCFF564UTR.bed.gz GRCh38 released missing unfiltered alignments ENCFF118UYB bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF149LTH, ENCFF227IZS 7132481 ENCODE Processing Pipeline b6872dc8aae8cb232b01e7801f1a1720 https://www.encodeproject.org/files/ENCFF118UYB/@@download/ENCFF118UYB.bed.gz GRCh38 released missing unfiltered alignments ENCFF058FAF bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF149LTH, ENCFF227IZS, ENCFF873BRB, ENCFF910IKB 7222565 ENCODE Processing Pipeline 21c7ac322ab0c6808345be3fa8f86d25 https://www.encodeproject.org/files/ENCFF058FAF/@@download/ENCFF058FAF.bed.gz GRCh38 released missing unfiltered alignments ENCFF571NDF bed narrowPeak conservative idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF058FAF, ENCFF118UYB, ENCFF419RSJ, ENCFF564UTR 518271 ENCODE Processing Pipeline ac1b57f6fdf886135da15fcacaa3be15 https://www.encodeproject.org/files/ENCFF571NDF/@@download/ENCFF571NDF.bed.gz GRCh38 released missing unfiltered alignments ENCFF088LZZ bed narrowPeak optimal idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF058FAF, ENCFF118UYB, ENCFF419RSJ, ENCFF564UTR 551900 ENCODE Processing Pipeline 6b756a71455696367d8fba2829e048c9 https://www.encodeproject.org/files/ENCFF088LZZ/@@download/ENCFF088LZZ.bed.gz GRCh38 released missing unfiltered alignments ENCFF707CDO bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF051LWI, ENCFF295CQL 7127888 ENCODE Processing Pipeline 4dcaba83d4d91c73c9e927c32207b2d4 https://www.encodeproject.org/files/ENCFF707CDO/@@download/ENCFF707CDO.bed.gz hg19 released missing unfiltered alignments ENCFF417LEJ bed narrowPeak optimal idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF001TDO, ENCFF361LXO, ENCFF707CDO, ENCFF727WJU 563762 ENCODE Processing Pipeline ee5c6e2a9253142ea4ec418a2668994d https://www.encodeproject.org/files/ENCFF417LEJ/@@download/ENCFF417LEJ.bed.gz hg19 released missing unfiltered alignments ENCFF361LXO bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF051LWI, ENCFF295CQL, ENCFF581ZJL, ENCFF861YTF 7247839 ENCODE Processing Pipeline 7a23ac37a95706e8f7e5a1fa01ae85c0 https://www.encodeproject.org/files/ENCFF361LXO/@@download/ENCFF361LXO.bed.gz hg19 released missing unfiltered alignments ENCFF727WJU bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF581ZJL, ENCFF861YTF 7063882 ENCODE Processing Pipeline 12166be600da69a05f8b8c0a2b48599d https://www.encodeproject.org/files/ENCFF727WJU/@@download/ENCFF727WJU.bed.gz hg19 released missing unfiltered alignments ENCFF593VVO bed narrowPeak conservative idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF001TDO, ENCFF361LXO, ENCFF707CDO, ENCFF727WJU 526638 ENCODE Processing Pipeline bbec7cf52676b9209866f20a813e9731 https://www.encodeproject.org/files/ENCFF593VVO/@@download/ENCFF593VVO.bed.gz hg19 released missing unfiltered alignments ENCFF001VMT bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 158167 Sherman Weissman, Yale 1559f0c4b290124d18d21caebe70a85e https://www.encodeproject.org/files/ENCFF001VMT/@@download/ENCFF001VMT.bed.gz hg19 archived mixed read lengths, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CWG bed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 401062 ENCODE Consortium Analysis Working Group d5ec7ee4fc4ed19db3b6d72ce1341cdd https://www.encodeproject.org/files/ENCFF002CWG/@@download/ENCFF002CWG.bed.gz hg19 archived mixed read lengths, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF728VLI bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF014DRH, ENCFF482LDC 2632162 ENCODE Processing Pipeline ba407bb759b9d6cd787864ba08319b8b https://www.encodeproject.org/files/ENCFF728VLI/@@download/ENCFF728VLI.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF677RZA bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF014DRH, ENCFF482LDC, ENCFF553WMU 5035983 ENCODE Processing Pipeline aa47c7e820a787c18a61ba841aa9466b https://www.encodeproject.org/files/ENCFF677RZA/@@download/ENCFF677RZA.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF122BCQ bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF553WMU 4626333 ENCODE Processing Pipeline 3d2c6ee0cf440e413e1a219592af0760 https://www.encodeproject.org/files/ENCFF122BCQ/@@download/ENCFF122BCQ.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF723QGS bed narrowPeak conservative idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF122BCQ, ENCFF419RSJ, ENCFF677RZA, ENCFF728VLI 221919 ENCODE Processing Pipeline 9ca035477c6ae95fe30eada01d7ffa43 https://www.encodeproject.org/files/ENCFF723QGS/@@download/ENCFF723QGS.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF162CMX bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF786FUF 2638510 ENCODE Processing Pipeline f5b08c1bb672d0c431f41530b2bea7fe https://www.encodeproject.org/files/ENCFF162CMX/@@download/ENCFF162CMX.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF527EGF bed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF122BCQ, ENCFF419RSJ, ENCFF677RZA, ENCFF728VLI 371250 ENCODE Processing Pipeline 3a8523899d1f1064e0fc3ca82eed8c9b https://www.encodeproject.org/files/ENCFF527EGF/@@download/ENCFF527EGF.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF934ENB bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF786FUF, ENCFF856BHN 5035619 ENCODE Processing Pipeline 71fc661f1eec0e96a9d500014c38457b https://www.encodeproject.org/files/ENCFF934ENB/@@download/ENCFF934ENB.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF987HSI bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF856BHN 4571912 ENCODE Processing Pipeline 4d3e144ab7b5f8f68869361d01a844a0 https://www.encodeproject.org/files/ENCFF987HSI/@@download/ENCFF987HSI.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF390IMT bed narrowPeak conservative idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF162CMX, ENCFF934ENB, ENCFF987HSI 221318 ENCODE Processing Pipeline da826e78c48b0e1e1aa8ae4611dab38f https://www.encodeproject.org/files/ENCFF390IMT/@@download/ENCFF390IMT.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF099SDW bed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF162CMX, ENCFF934ENB, ENCFF987HSI 365512 ENCODE Processing Pipeline a5ea998d3571ba34457f33fe6da76db2 https://www.encodeproject.org/files/ENCFF099SDW/@@download/ENCFF099SDW.bed.gz hg19 released mixed read lengths, borderline replicate concordance biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF001VMI bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1882743 Michael Snyder, Stanford ebf5ea511ad1df631c5ff99c4f772e1e https://www.encodeproject.org/files/ENCFF001VMI/@@download/ENCFF001VMI.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CVV bed narrowPeak optimal idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 892426 ENCODE Consortium Analysis Working Group 04e3941e0e52a83b13096436c6491a25 https://www.encodeproject.org/files/ENCFF002CVV/@@download/ENCFF002CVV.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF055JYQ bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF729WGC 5039609 ENCODE Processing Pipeline 4d5e2f4ec418809660c03ea8aae3364d https://www.encodeproject.org/files/ENCFF055JYQ/@@download/ENCFF055JYQ.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF174YEH bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF953ZZL 5026150 ENCODE Processing Pipeline 2fc56ee9649c16389f5b9cf74edc0288 https://www.encodeproject.org/files/ENCFF174YEH/@@download/ENCFF174YEH.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF817MVX bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF729WGC, ENCFF953ZZL 5902996 ENCODE Processing Pipeline 2320eb5e619ab2ec8e58bb429751dbf7 https://www.encodeproject.org/files/ENCFF817MVX/@@download/ENCFF817MVX.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF321KQD bed narrowPeak optimal idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF055JYQ, ENCFF174YEH, ENCFF419RSJ, ENCFF817MVX 765147 ENCODE Processing Pipeline 7eefd24d34e7e7022be375a336f82ac8 https://www.encodeproject.org/files/ENCFF321KQD/@@download/ENCFF321KQD.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF196UZE bed narrowPeak conservative idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF055JYQ, ENCFF174YEH, ENCFF419RSJ, ENCFF817MVX 720168 ENCODE Processing Pipeline 013ff1a9b0eea71e032c73043ad273db https://www.encodeproject.org/files/ENCFF196UZE/@@download/ENCFF196UZE.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF001VOJ bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1785687 Michael Snyder, Stanford 5f7f919615060c200ba047bece218c5e https://www.encodeproject.org/files/ENCFF001VOJ/@@download/ENCFF001VOJ.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CXS bed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 112983 ENCODE Consortium Analysis Working Group 92403e1ae30fd8ab1f735a7344bbfbd3 https://www.encodeproject.org/files/ENCFF002CXS/@@download/ENCFF002CXS.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF388ATO bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF263ZPM, ENCFF710NTS 6963167 ENCODE Processing Pipeline 194e237e1eb582828183e76472f0d467 https://www.encodeproject.org/files/ENCFF388ATO/@@download/ENCFF388ATO.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF932UHC bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF207UON, ENCFF710NTS 7095210 ENCODE Processing Pipeline df87abde436c4eb20e311cfa808f3398 https://www.encodeproject.org/files/ENCFF932UHC/@@download/ENCFF932UHC.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF039RTS bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF207UON, ENCFF263ZPM, ENCFF710NTS 7125640 ENCODE Processing Pipeline 5f5453e828ea7d250f70357dc366c9ea https://www.encodeproject.org/files/ENCFF039RTS/@@download/ENCFF039RTS.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF296CNQ bed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF039RTS, ENCFF388ATO, ENCFF932UHC 185689 ENCODE Processing Pipeline 96912e3d9f88029951abcd019f3a5721 https://www.encodeproject.org/files/ENCFF296CNQ/@@download/ENCFF296CNQ.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF712GHT bed narrowPeak conservative idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF039RTS, ENCFF388ATO, ENCFF932UHC 132287 ENCODE Processing Pipeline c12b463ec2517a3d4ea9717b040c4e3c https://www.encodeproject.org/files/ENCFF712GHT/@@download/ENCFF712GHT.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF027TJN bed narrowPeak conservative idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF137UHI, ENCFF222KTC, ENCFF419RSJ, ENCFF446MMZ 129023 ENCODE Processing Pipeline b4c9dbc4a4e524a0aac441b41a352c37 https://www.encodeproject.org/files/ENCFF027TJN/@@download/ENCFF027TJN.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF222KTC bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF630JRN 6957946 ENCODE Processing Pipeline dab330a66dafea71c26fa7a9169b6f25 https://www.encodeproject.org/files/ENCFF222KTC/@@download/ENCFF222KTC.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF446MMZ bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF594OID, ENCFF630JRN 7123586 ENCODE Processing Pipeline 99818a4135c8d018548f641d18a19614 https://www.encodeproject.org/files/ENCFF446MMZ/@@download/ENCFF446MMZ.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF137UHI bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF594OID 7095140 ENCODE Processing Pipeline 051bb94191798cdef61c59e8c3e09a1c https://www.encodeproject.org/files/ENCFF137UHI/@@download/ENCFF137UHI.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF266OPF bed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF137UHI, ENCFF222KTC, ENCFF419RSJ, ENCFF446MMZ 199055 ENCODE Processing Pipeline a30020977d8528dcc6f60d2d4c5abef4 https://www.encodeproject.org/files/ENCFF266OPF/@@download/ENCFF266OPF.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF001VNU bed narrowPeak peaks ENCSR000EFX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 1390144 Michael Snyder, Stanford 571e908772418b3339c3915fa8b881da https://www.encodeproject.org/files/ENCFF001VNU/@@download/ENCFF001VNU.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CXE bed narrowPeak optimal idr thresholded peaks ENCSR000EFX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 721064 ENCODE Consortium Analysis Working Group e1863bce31615f8e2ec3ec40640a81d4 https://www.encodeproject.org/files/ENCFF002CXE/@@download/ENCFF002CXE.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF001VMX bed narrowPeak peaks ENCSR000EGG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 1957921 Michael Snyder, Stanford 1efe7c07cb88530f416b34924fde2d3c https://www.encodeproject.org/files/ENCFF001VMX/@@download/ENCFF001VMX.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF002CWK bed narrowPeak optimal idr thresholded peaks ENCSR000EGG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 773454 ENCODE Consortium Analysis Working Group 7da6aa23d8d814b41ba1072b9b31d1cb https://www.encodeproject.org/files/ENCFF002CWK/@@download/ENCFF002CWK.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF722AOG bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF500YYZ 6762980 ENCODE Processing Pipeline 33d4328fe4ff3a472edff81bf8f5d566 https://www.encodeproject.org/files/ENCFF722AOG/@@download/ENCFF722AOG.bed.gz GRCh38 released missing unfiltered alignments ENCFF155HVK bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF717OYW 6948068 ENCODE Processing Pipeline 02fd518818560c28ed20ed98f4c291bd https://www.encodeproject.org/files/ENCFF155HVK/@@download/ENCFF155HVK.bed.gz GRCh38 released missing unfiltered alignments ENCFF316ASR bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF500YYZ, ENCFF717OYW 7235161 ENCODE Processing Pipeline 50e19bd44174bb286aa28ae2a15e7b8f https://www.encodeproject.org/files/ENCFF316ASR/@@download/ENCFF316ASR.bed.gz GRCh38 released missing unfiltered alignments ENCFF319TPR bed narrowPeak conservative idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF155HVK, ENCFF316ASR, ENCFF419RSJ, ENCFF722AOG 308195 ENCODE Processing Pipeline 9cd65cf4f07b83af35770c4a098fd4c6 https://www.encodeproject.org/files/ENCFF319TPR/@@download/ENCFF319TPR.bed.gz GRCh38 released missing unfiltered alignments ENCFF553KIK bed narrowPeak optimal idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF155HVK, ENCFF316ASR, ENCFF419RSJ, ENCFF722AOG 416663 ENCODE Processing Pipeline a5af5857bfbc3bfc8fea09cb90e67a16 https://www.encodeproject.org/files/ENCFF553KIK/@@download/ENCFF553KIK.bed.gz GRCh38 released missing unfiltered alignments ENCFF846MNB bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF666BDF, ENCFF875HFU 7230895 ENCODE Processing Pipeline 7f90af1afbe228c27a92cc79aea4dfc1 https://www.encodeproject.org/files/ENCFF846MNB/@@download/ENCFF846MNB.bed.gz hg19 released missing unfiltered alignments ENCFF407AOX bed narrowPeak optimal idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF295KFV, ENCFF597MUA, ENCFF846MNB 415569 ENCODE Processing Pipeline 66b1a2d68c92fbeb25faa3e5e7de339a https://www.encodeproject.org/files/ENCFF407AOX/@@download/ENCFF407AOX.bed.gz hg19 released missing unfiltered alignments ENCFF597MUA bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF875HFU 6760876 ENCODE Processing Pipeline 1ae57fda98146bd40cef8c7399d85572 https://www.encodeproject.org/files/ENCFF597MUA/@@download/ENCFF597MUA.bed.gz hg19 released missing unfiltered alignments ENCFF295KFV bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF666BDF 6937560 ENCODE Processing Pipeline b92d3204db03532d0f6a6daf12d76ac8 https://www.encodeproject.org/files/ENCFF295KFV/@@download/ENCFF295KFV.bed.gz hg19 released missing unfiltered alignments ENCFF568FLE bed narrowPeak conservative idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF295KFV, ENCFF597MUA, ENCFF846MNB 305483 ENCODE Processing Pipeline 0673b3135cd30ac0509e0fc4ec01edb6 https://www.encodeproject.org/files/ENCFF568FLE/@@download/ENCFF568FLE.bed.gz hg19 released missing unfiltered alignments ENCFF224GWU bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF056YEU, ENCFF581ZJL 6885777 ENCODE Processing Pipeline 70192d3307157e7e26c82dba98d77c9d https://www.encodeproject.org/files/ENCFF224GWU/@@download/ENCFF224GWU.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF035WWJ bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF688SSK 6996638 ENCODE Processing Pipeline 1e16fc976551c3b160a13c72af02467e https://www.encodeproject.org/files/ENCFF035WWJ/@@download/ENCFF035WWJ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF359OAZ bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF056YEU, ENCFF581ZJL, ENCFF688SSK 7160460 ENCODE Processing Pipeline 505401679b58f689a58f4932a8bc76d7 https://www.encodeproject.org/files/ENCFF359OAZ/@@download/ENCFF359OAZ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF615BZR bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF284XYU 6784009 ENCODE Processing Pipeline 86a7cd8db98332b152e44a13e13c4e71 https://www.encodeproject.org/files/ENCFF615BZR/@@download/ENCFF615BZR.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF754BES bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF550IUC 6949241 ENCODE Processing Pipeline b1b415c9b9f964d4b2cf246830bd50c9 https://www.encodeproject.org/files/ENCFF754BES/@@download/ENCFF754BES.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF888YHJ bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF284XYU, ENCFF550IUC 7123575 ENCODE Processing Pipeline 9a0df81b4f7740c73a603f2ade5e029e https://www.encodeproject.org/files/ENCFF888YHJ/@@download/ENCFF888YHJ.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF067JKB bed narrowPeak conservative idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF615BZR, ENCFF754BES, ENCFF888YHJ 590349 ENCODE Processing Pipeline 7df767d8ffe21784582fddfb3063c3e5 https://www.encodeproject.org/files/ENCFF067JKB/@@download/ENCFF067JKB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF363IQN bed narrowPeak optimal idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF615BZR, ENCFF754BES, ENCFF888YHJ 681758 ENCODE Processing Pipeline 604cdb65e93975323200d473f7490995 https://www.encodeproject.org/files/ENCFF363IQN/@@download/ENCFF363IQN.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF175IIE bed narrowPeak optimal idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF035WWJ, ENCFF224GWU, ENCFF359OAZ 603194 ENCODE Processing Pipeline adbe9db9e3821e3e5d266adc496d2cf0 https://www.encodeproject.org/files/ENCFF175IIE/@@download/ENCFF175IIE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF078SJN bed narrowPeak conservative idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF035WWJ, ENCFF224GWU, ENCFF359OAZ 515602 ENCODE Processing Pipeline 76344cdee4dc5d4227dad8bf9b6c9287 https://www.encodeproject.org/files/ENCFF078SJN/@@download/ENCFF078SJN.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF127MAS bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF030VNO, ENCFF051LWI, ENCFF293FTN, ENCFF581ZJL 7248174 ENCODE Processing Pipeline efa71e3f661982c3607f80b53f2dfe80 https://www.encodeproject.org/files/ENCFF127MAS/@@download/ENCFF127MAS.bed.gz hg19 released missing unfiltered alignments ENCFF856IOQ bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF293FTN 7007064 ENCODE Processing Pipeline ae25957c3193462c602438160b8c2ba7 https://www.encodeproject.org/files/ENCFF856IOQ/@@download/ENCFF856IOQ.bed.gz hg19 released missing unfiltered alignments ENCFF816EGL bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF030VNO, ENCFF581ZJL 7132065 ENCODE Processing Pipeline 0680be1dc095e0e4b488f230d0f6608d https://www.encodeproject.org/files/ENCFF816EGL/@@download/ENCFF816EGL.bed.gz hg19 released missing unfiltered alignments ENCFF646VQW bed narrowPeak optimal idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF127MAS, ENCFF816EGL, ENCFF856IOQ 621283 ENCODE Processing Pipeline 74f7c15fa48b8b2fb599b23015bb2563 https://www.encodeproject.org/files/ENCFF646VQW/@@download/ENCFF646VQW.bed.gz hg19 released missing unfiltered alignments ENCFF647EPQ bed narrowPeak conservative idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF127MAS, ENCFF816EGL, ENCFF856IOQ 442995 ENCODE Processing Pipeline 5be8bd5e5b9ca2a667b825dddc9d095d https://www.encodeproject.org/files/ENCFF647EPQ/@@download/ENCFF647EPQ.bed.gz hg19 released missing unfiltered alignments ENCFF138SQK bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF551IFV 7045635 ENCODE Processing Pipeline 0890d982ee973fd384230043d8c1f870 https://www.encodeproject.org/files/ENCFF138SQK/@@download/ENCFF138SQK.bed.gz GRCh38 released missing unfiltered alignments ENCFF024BEZ bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF923LMN 6927208 ENCODE Processing Pipeline 8ade1d8fa2d1a1973a651e5da95eff35 https://www.encodeproject.org/files/ENCFF024BEZ/@@download/ENCFF024BEZ.bed.gz GRCh38 released missing unfiltered alignments ENCFF461ZWP bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF551IFV, ENCFF923LMN 7236048 ENCODE Processing Pipeline bf80e764f5b7fb97655213b27d8f34be https://www.encodeproject.org/files/ENCFF461ZWP/@@download/ENCFF461ZWP.bed.gz GRCh38 released missing unfiltered alignments ENCFF263NDI bed narrowPeak conservative idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF024BEZ, ENCFF138SQK, ENCFF419RSJ, ENCFF461ZWP 441643 ENCODE Processing Pipeline 79d7ff2e44217193f2c934be2c6436dc https://www.encodeproject.org/files/ENCFF263NDI/@@download/ENCFF263NDI.bed.gz GRCh38 released missing unfiltered alignments ENCFF063NXI bed narrowPeak optimal idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF024BEZ, ENCFF138SQK, ENCFF419RSJ, ENCFF461ZWP 622936 ENCODE Processing Pipeline b6c9eb5283c3caed90a72319bac3b3e5 https://www.encodeproject.org/files/ENCFF063NXI/@@download/ENCFF063NXI.bed.gz GRCh38 released missing unfiltered alignments ENCFF001VLW bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 849854 Michael Snyder, Stanford cb26007d18a7cf24a0b680ad24cb1d4a https://www.encodeproject.org/files/ENCFF001VLW/@@download/ENCFF001VLW.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CVL bed narrowPeak optimal idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 209743 ENCODE Consortium Analysis Working Group 506383a9730f9b5869c629ba78084b51 https://www.encodeproject.org/files/ENCFF002CVL/@@download/ENCFF002CVL.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF478PFP bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF495MEU 5188721 ENCODE Processing Pipeline c63f7f67ba202142b0eca0d01b5a1b2c https://www.encodeproject.org/files/ENCFF478PFP/@@download/ENCFF478PFP.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF952GND bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF477DKP 4436184 ENCODE Processing Pipeline bd6e0623aead2f87c84242c26f8d1639 https://www.encodeproject.org/files/ENCFF952GND/@@download/ENCFF952GND.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF954ZUM bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF477DKP, ENCFF495MEU 5711942 ENCODE Processing Pipeline 96d3da87dc7d1915ec0f0a2e1656b9d1 https://www.encodeproject.org/files/ENCFF954ZUM/@@download/ENCFF954ZUM.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF272CWK bed narrowPeak conservative idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF478PFP, ENCFF952GND, ENCFF954ZUM 187740 ENCODE Processing Pipeline a277c342ec70c32bc1c8e1a6a8e4fe18 https://www.encodeproject.org/files/ENCFF272CWK/@@download/ENCFF272CWK.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF757OML bed narrowPeak optimal idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF478PFP, ENCFF952GND, ENCFF954ZUM 202727 ENCODE Processing Pipeline 1470b97c347d6d31e38f0fb7655aa78f https://www.encodeproject.org/files/ENCFF757OML/@@download/ENCFF757OML.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF313UKE bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF747PCD 6812372 ENCODE Processing Pipeline 85ba7f28c130cc201d5bef20fda3226d https://www.encodeproject.org/files/ENCFF313UKE/@@download/ENCFF313UKE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF122FWH bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF558XOV 6858089 ENCODE Processing Pipeline 9cd613d51d776b7ba4ac1c3f13831780 https://www.encodeproject.org/files/ENCFF122FWH/@@download/ENCFF122FWH.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF240NFK bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF558XOV, ENCFF581ZJL, ENCFF747PCD 7214480 ENCODE Processing Pipeline 511fdf36f68b74570878b1c8145fa532 https://www.encodeproject.org/files/ENCFF240NFK/@@download/ENCFF240NFK.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF936WPW bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF857YYV, ENCFF910IKB 6812175 ENCODE Processing Pipeline e7f4b0c75e14fbd99a48dadaec25ac20 https://www.encodeproject.org/files/ENCFF936WPW/@@download/ENCFF936WPW.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF833IMP bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF320WXN 6773022 ENCODE Processing Pipeline 161f9074b0ad77ad6b09990f6a0d57a3 https://www.encodeproject.org/files/ENCFF833IMP/@@download/ENCFF833IMP.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF944XDI bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF320WXN, ENCFF857YYV, ENCFF910IKB 7167898 ENCODE Processing Pipeline 3e3fce687a5de40c4f8e897f39351a9a https://www.encodeproject.org/files/ENCFF944XDI/@@download/ENCFF944XDI.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF038PPG bed narrowPeak conservative idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF833IMP, ENCFF936WPW, ENCFF944XDI 400835 ENCODE Processing Pipeline b454808d7e4189ea74ef12d1ad33b5a2 https://www.encodeproject.org/files/ENCFF038PPG/@@download/ENCFF038PPG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF592GWM bed narrowPeak optimal idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF833IMP, ENCFF936WPW, ENCFF944XDI 581507 ENCODE Processing Pipeline 9c784f26d319aa77a01800ad900d28ba https://www.encodeproject.org/files/ENCFF592GWM/@@download/ENCFF592GWM.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF602OKQ bed narrowPeak optimal idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF122FWH, ENCFF240NFK, ENCFF313UKE 520809 ENCODE Processing Pipeline 03db0bf5bd21f1912d550e6072f5ece4 https://www.encodeproject.org/files/ENCFF602OKQ/@@download/ENCFF602OKQ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF058HGE bed narrowPeak conservative idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF122FWH, ENCFF240NFK, ENCFF313UKE 353314 ENCODE Processing Pipeline 54f82fe70fabe92fa9bd9bb44295a1dd https://www.encodeproject.org/files/ENCFF058HGE/@@download/ENCFF058HGE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF138RWJ bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF986GTB 6970449 ENCODE Processing Pipeline afd34a6b4a486fa0b6feb85b2992031d https://www.encodeproject.org/files/ENCFF138RWJ/@@download/ENCFF138RWJ.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF263SML bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF615FDE 6840897 ENCODE Processing Pipeline 3d9c51ef3db7280749befdb5d623ea1f https://www.encodeproject.org/files/ENCFF263SML/@@download/ENCFF263SML.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF978MYZ bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF615FDE, ENCFF986GTB 7149174 ENCODE Processing Pipeline d608454c08c8de0f51d7972f7aca6387 https://www.encodeproject.org/files/ENCFF978MYZ/@@download/ENCFF978MYZ.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF552SBR bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF722LJA 6864653 ENCODE Processing Pipeline 96f2f1111693aeeb92783096181709ee https://www.encodeproject.org/files/ENCFF552SBR/@@download/ENCFF552SBR.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF387LCD bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF564CXM, ENCFF910IKB 6797676 ENCODE Processing Pipeline 2d46b9d2ef30b56f84e6f55f6e502621 https://www.encodeproject.org/files/ENCFF387LCD/@@download/ENCFF387LCD.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF490KOA bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF564CXM, ENCFF722LJA, ENCFF910IKB 7136563 ENCODE Processing Pipeline 9e5056eaec2bc0f5d6ab1761c2e65245 https://www.encodeproject.org/files/ENCFF490KOA/@@download/ENCFF490KOA.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF782YFS bed narrowPeak optimal idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF387LCD, ENCFF419RSJ, ENCFF490KOA, ENCFF552SBR 684837 ENCODE Processing Pipeline f22788b5a3d64f0348e8aa61bf92085c https://www.encodeproject.org/files/ENCFF782YFS/@@download/ENCFF782YFS.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF762NRN bed narrowPeak conservative idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF387LCD, ENCFF419RSJ, ENCFF490KOA, ENCFF552SBR 643781 ENCODE Processing Pipeline 66af117f75856c31f1eef9c811eb6723 https://www.encodeproject.org/files/ENCFF762NRN/@@download/ENCFF762NRN.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF905MTJ bed narrowPeak conservative idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF138RWJ, ENCFF263SML, ENCFF978MYZ 566520 ENCODE Processing Pipeline 499de513bf3853402210c3ef992bde7c https://www.encodeproject.org/files/ENCFF905MTJ/@@download/ENCFF905MTJ.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF809MSQ bed narrowPeak optimal idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF138RWJ, ENCFF263SML, ENCFF978MYZ 603740 ENCODE Processing Pipeline c5c300d8c24705b1cf027b0ddc4468af https://www.encodeproject.org/files/ENCFF809MSQ/@@download/ENCFF809MSQ.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF719MEC bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF274ZBZ, ENCFF581ZJL, ENCFF950GGY 7249645 ENCODE Processing Pipeline 68858fd2b2be45acbdab1c2ea2759df5 https://www.encodeproject.org/files/ENCFF719MEC/@@download/ENCFF719MEC.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF596CWP bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF950GGY 6695065 ENCODE Processing Pipeline ef13e3b8be36e873b31da94086526824 https://www.encodeproject.org/files/ENCFF596CWP/@@download/ENCFF596CWP.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF893FDT bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF274ZBZ 6996985 ENCODE Processing Pipeline 923708270fe325cf05efb068175c9b1f https://www.encodeproject.org/files/ENCFF893FDT/@@download/ENCFF893FDT.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF562ERQ bed narrowPeak conservative idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF493XGB, ENCFF853PDJ, ENCFF874WMJ 257860 ENCODE Processing Pipeline 1819aaf3bf659ffcfa220d60672385e9 https://www.encodeproject.org/files/ENCFF562ERQ/@@download/ENCFF562ERQ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF853PDJ bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF405YCF, ENCFF910IKB 6590433 ENCODE Processing Pipeline 1068151e1afa24764c290fdb7f791b11 https://www.encodeproject.org/files/ENCFF853PDJ/@@download/ENCFF853PDJ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF874WMJ bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF358SSM 6867148 ENCODE Processing Pipeline 98372b3bd268a11c54fd4aeefaf312e7 https://www.encodeproject.org/files/ENCFF874WMJ/@@download/ENCFF874WMJ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF493XGB bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF358SSM, ENCFF405YCF, ENCFF910IKB 7243087 ENCODE Processing Pipeline e0d0b90c894cc3e8094717102e077822 https://www.encodeproject.org/files/ENCFF493XGB/@@download/ENCFF493XGB.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF566HGU bed narrowPeak optimal idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF493XGB, ENCFF853PDJ, ENCFF874WMJ 409522 ENCODE Processing Pipeline 8ac2d34f8435e5c7c7cb81889c5f2479 https://www.encodeproject.org/files/ENCFF566HGU/@@download/ENCFF566HGU.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF708GFU bed narrowPeak optimal idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF596CWP, ENCFF719MEC, ENCFF893FDT 344465 ENCODE Processing Pipeline a0e276147e2f327c48369ebaaa3944d4 https://www.encodeproject.org/files/ENCFF708GFU/@@download/ENCFF708GFU.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF313FMB bed narrowPeak conservative idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF596CWP, ENCFF719MEC, ENCFF893FDT 213384 ENCODE Processing Pipeline 61759af3e1d69abfdeac2cfa492f2e80 https://www.encodeproject.org/files/ENCFF313FMB/@@download/ENCFF313FMB.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read depth missing unfiltered alignments ENCFF786SHU bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF690URW 6674084 ENCODE Processing Pipeline 5ffc9373da303fbbce7ff3bcee792941 https://www.encodeproject.org/files/ENCFF786SHU/@@download/ENCFF786SHU.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF428HHR bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF208HMF, ENCFF581ZJL 6312651 ENCODE Processing Pipeline 7b8c9af1b060b40e547da91d419384f4 https://www.encodeproject.org/files/ENCFF428HHR/@@download/ENCFF428HHR.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF633IWB bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF208HMF, ENCFF581ZJL, ENCFF690URW 7176680 ENCODE Processing Pipeline b908015cbd5ccd5a2dda5c8ea4cd6dc2 https://www.encodeproject.org/files/ENCFF633IWB/@@download/ENCFF633IWB.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF399LZL bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF427CAA 6160121 ENCODE Processing Pipeline 426e7ae48529c34482ddc45a60186c55 https://www.encodeproject.org/files/ENCFF399LZL/@@download/ENCFF399LZL.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF947VSX bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF314PZG 6561827 ENCODE Processing Pipeline 403f1774e65df6f1b16e1a77848ec318 https://www.encodeproject.org/files/ENCFF947VSX/@@download/ENCFF947VSX.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF227NAG bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF314PZG, ENCFF427CAA 7141205 ENCODE Processing Pipeline 52e9c6e7fe3f409edbd17b62a8cf7605 https://www.encodeproject.org/files/ENCFF227NAG/@@download/ENCFF227NAG.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF371FZO bed narrowPeak conservative idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF227NAG, ENCFF399LZL, ENCFF419RSJ, ENCFF947VSX 172119 ENCODE Processing Pipeline fb425035e45219df7e6857a720b762af https://www.encodeproject.org/files/ENCFF371FZO/@@download/ENCFF371FZO.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF382RFJ bed narrowPeak optimal idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF227NAG, ENCFF399LZL, ENCFF419RSJ, ENCFF947VSX 293750 ENCODE Processing Pipeline 94a6818dd2484bf30baacc328b3f53e3 https://www.encodeproject.org/files/ENCFF382RFJ/@@download/ENCFF382RFJ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF152WSS bed narrowPeak conservative idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF428HHR, ENCFF633IWB, ENCFF786SHU 145412 ENCODE Processing Pipeline 4ded47f7fed94992b16ae022272e8b84 https://www.encodeproject.org/files/ENCFF152WSS/@@download/ENCFF152WSS.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF701NVT bed narrowPeak optimal idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF428HHR, ENCFF633IWB, ENCFF786SHU 243759 ENCODE Processing Pipeline 2d4ce296af6dc930e1ec43681398c171 https://www.encodeproject.org/files/ENCFF701NVT/@@download/ENCFF701NVT.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF829KOI bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF247FGI 6523130 ENCODE Processing Pipeline a61313938b97b417a8b64b95393e2417 https://www.encodeproject.org/files/ENCFF829KOI/@@download/ENCFF829KOI.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF638IIC bed narrowPeak optimal idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF266OPP, ENCFF419RSJ, ENCFF473CGS, ENCFF829KOI 168899 ENCODE Processing Pipeline a6fb144af17e1bf26776ea364011337f https://www.encodeproject.org/files/ENCFF638IIC/@@download/ENCFF638IIC.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF473CGS bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF488BQX 6592061 ENCODE Processing Pipeline f804384992c365c23482ac454e0e66fa https://www.encodeproject.org/files/ENCFF473CGS/@@download/ENCFF473CGS.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF266OPP bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF247FGI, ENCFF488BQX 7192496 ENCODE Processing Pipeline cf628c0d321ea29f9d3957e57740d46b https://www.encodeproject.org/files/ENCFF266OPP/@@download/ENCFF266OPP.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF757UDB bed narrowPeak conservative idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF266OPP, ENCFF419RSJ, ENCFF473CGS, ENCFF829KOI 117072 ENCODE Processing Pipeline d25836a0a038ff0426c857de4a6ee295 https://www.encodeproject.org/files/ENCFF757UDB/@@download/ENCFF757UDB.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF053IVE bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF051LWI, ENCFF491SHN 6543669 ENCODE Processing Pipeline 90dfef52ac8083f3669e86d458fcf7e5 https://www.encodeproject.org/files/ENCFF053IVE/@@download/ENCFF053IVE.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF380AQD bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF252BMK, ENCFF581ZJL 6596604 ENCODE Processing Pipeline adb8150c7c79973e22d5a89c5e5f8249 https://www.encodeproject.org/files/ENCFF380AQD/@@download/ENCFF380AQD.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF269ZNE bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF051LWI, ENCFF252BMK, ENCFF491SHN, ENCFF581ZJL 7193815 ENCODE Processing Pipeline d541d28f5f064a3aecb26d090dfc28c0 https://www.encodeproject.org/files/ENCFF269ZNE/@@download/ENCFF269ZNE.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF062BMU bed narrowPeak conservative idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF053IVE, ENCFF269ZNE, ENCFF380AQD 116065 ENCODE Processing Pipeline e692cab543695a6b11a1d2614b6a169e https://www.encodeproject.org/files/ENCFF062BMU/@@download/ENCFF062BMU.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF080NBZ bed narrowPeak optimal idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF053IVE, ENCFF269ZNE, ENCFF380AQD 166325 ENCODE Processing Pipeline e76d0ae33614c1e309ad3b9500285627 https://www.encodeproject.org/files/ENCFF080NBZ/@@download/ENCFF080NBZ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF508CQR bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF308WNU, ENCFF581ZJL, ENCFF903MUJ 6202139 ENCODE Processing Pipeline ab27d8f45f974a913458d063b70a81cb https://www.encodeproject.org/files/ENCFF508CQR/@@download/ENCFF508CQR.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF415ATH bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF903MUJ 5480434 ENCODE Processing Pipeline e663731b6cbec67cbebc13b84865e7a6 https://www.encodeproject.org/files/ENCFF415ATH/@@download/ENCFF415ATH.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF397VOW bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF308WNU 5396166 ENCODE Processing Pipeline 2fb2202576ba8df823a78813e0b45aba https://www.encodeproject.org/files/ENCFF397VOW/@@download/ENCFF397VOW.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF872YNU bed narrowPeak optimal idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF397VOW, ENCFF415ATH, ENCFF508CQR 7405 ENCODE Processing Pipeline ee5d6d997ebb23f6c456b49af593f6a6 https://www.encodeproject.org/files/ENCFF872YNU/@@download/ENCFF872YNU.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF326NWF bed narrowPeak conservative idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF397VOW, ENCFF415ATH, ENCFF508CQR 2144 ENCODE Processing Pipeline a2b230274b13d559d71574aa4f04a0b8 https://www.encodeproject.org/files/ENCFF326NWF/@@download/ENCFF326NWF.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF692ENC bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF125HKL 5860619 ENCODE Processing Pipeline 7ac00cd675836b16b392758629b26b51 https://www.encodeproject.org/files/ENCFF692ENC/@@download/ENCFF692ENC.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF771QTQ bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF046VNU 5968414 ENCODE Processing Pipeline b17721e18b85f5e14d25f33295df7e3a https://www.encodeproject.org/files/ENCFF771QTQ/@@download/ENCFF771QTQ.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF694OEX bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF046VNU, ENCFF125HKL 6895952 ENCODE Processing Pipeline d37be6c274e633cc99cf1a6adfb34e35 https://www.encodeproject.org/files/ENCFF694OEX/@@download/ENCFF694OEX.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF386ZWB bed narrowPeak conservative idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF692ENC, ENCFF694OEX, ENCFF771QTQ 2105 ENCODE Processing Pipeline 69c3ade3eaebd76afc0d8bc18b59f44b https://www.encodeproject.org/files/ENCFF386ZWB/@@download/ENCFF386ZWB.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF603SXI bed narrowPeak optimal idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF692ENC, ENCFF694OEX, ENCFF771QTQ 7154 ENCODE Processing Pipeline 1507bf9a1624f8c26861bce02c5ab885 https://www.encodeproject.org/files/ENCFF603SXI/@@download/ENCFF603SXI.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF001VNP bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1778034 Michael Snyder, Stanford ab5e64ba56a9a195b2d841a044d1d435 https://www.encodeproject.org/files/ENCFF001VNP/@@download/ENCFF001VNP.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF002CWZ bed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 788904 ENCODE Consortium Analysis Working Group fc92c89774100278488f9604f2b41d14 https://www.encodeproject.org/files/ENCFF002CWZ/@@download/ENCFF002CWZ.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF159IRT bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF904GCT 4828402 ENCODE Processing Pipeline 1aadafa6f0c66521cb34dd178f33868b https://www.encodeproject.org/files/ENCFF159IRT/@@download/ENCFF159IRT.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF367HPL bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF532IBJ, ENCFF710NTS 5543746 ENCODE Processing Pipeline f1705fbca0567dced7c801e7385cff4e https://www.encodeproject.org/files/ENCFF367HPL/@@download/ENCFF367HPL.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF774OPQ bed narrowPeak conservative idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF159IRT, ENCFF367HPL, ENCFF844LUC 665238 ENCODE Processing Pipeline b3fafbad2fadd92c91718e6f7b0a8afc https://www.encodeproject.org/files/ENCFF774OPQ/@@download/ENCFF774OPQ.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF337DKJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF159IRT, ENCFF367HPL, ENCFF844LUC 761693 ENCODE Processing Pipeline 3a2d773ef2c1c39f7ac48b0924f2febe https://www.encodeproject.org/files/ENCFF337DKJ/@@download/ENCFF337DKJ.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF844LUC bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF532IBJ, ENCFF710NTS, ENCFF904GCT 6005735 ENCODE Processing Pipeline fd8465215b193f6a6e08d11e0279e439 https://www.encodeproject.org/files/ENCFF844LUC/@@download/ENCFF844LUC.bed.gz hg19 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF416NHC bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF400BSN 4962159 ENCODE Processing Pipeline d83714f13c2bdcd19e88bc46778b12b6 https://www.encodeproject.org/files/ENCFF416NHC/@@download/ENCFF416NHC.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF587YQM bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF321ZQU 5592576 ENCODE Processing Pipeline 600e934e76282c503150b0a9653e6d36 https://www.encodeproject.org/files/ENCFF587YQM/@@download/ENCFF587YQM.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF571YBD bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF321ZQU, ENCFF400BSN 6153337 ENCODE Processing Pipeline 7d2b966d4712f84fabbda31debaf2757 https://www.encodeproject.org/files/ENCFF571YBD/@@download/ENCFF571YBD.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF826HDC bed narrowPeak conservative idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF416NHC, ENCFF419RSJ, ENCFF571YBD, ENCFF587YQM 711297 ENCODE Processing Pipeline 3ee82424a1d7aeb2fddde0e757dc775a https://www.encodeproject.org/files/ENCFF826HDC/@@download/ENCFF826HDC.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF213EYD bed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF416NHC, ENCFF419RSJ, ENCFF571YBD, ENCFF587YQM 808369 ENCODE Processing Pipeline 46a248a637663e0555402451943362c9 https://www.encodeproject.org/files/ENCFF213EYD/@@download/ENCFF213EYD.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF710KKZ bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF768VEY 6525420 ENCODE Processing Pipeline 8101449533063d4491dcd437c4d4400e https://www.encodeproject.org/files/ENCFF710KKZ/@@download/ENCFF710KKZ.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF218RJK bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF483UIU, ENCFF581ZJL 6233227 ENCODE Processing Pipeline 90c9ab711eba70a009b0589ea7057131 https://www.encodeproject.org/files/ENCFF218RJK/@@download/ENCFF218RJK.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF159RHZ bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF483UIU, ENCFF581ZJL, ENCFF768VEY 7148672 ENCODE Processing Pipeline 54ce759192f750f3ffc29b6826cdc475 https://www.encodeproject.org/files/ENCFF159RHZ/@@download/ENCFF159RHZ.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF877WEN bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF226KOW, ENCFF846CYU 7081904 ENCODE Processing Pipeline 79cb452ece2efdba21a13fd906b578ff https://www.encodeproject.org/files/ENCFF877WEN/@@download/ENCFF877WEN.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF546JXV bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF226KOW 6392247 ENCODE Processing Pipeline 5e0fc25c3914668186f0e14aae7b1980 https://www.encodeproject.org/files/ENCFF546JXV/@@download/ENCFF546JXV.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF711DYD bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF846CYU 6031283 ENCODE Processing Pipeline 7d351d15f9ba1b236be1800fda572f58 https://www.encodeproject.org/files/ENCFF711DYD/@@download/ENCFF711DYD.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF634VUQ bed narrowPeak conservative idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF546JXV, ENCFF711DYD, ENCFF877WEN 140035 ENCODE Processing Pipeline 266db749f52bbe13e5747d9affba5f00 https://www.encodeproject.org/files/ENCFF634VUQ/@@download/ENCFF634VUQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF445VTT bed narrowPeak optimal idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF546JXV, ENCFF711DYD, ENCFF877WEN 167855 ENCODE Processing Pipeline b3a7a5144a292cafe35edcd2c7e0439d https://www.encodeproject.org/files/ENCFF445VTT/@@download/ENCFF445VTT.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF414ZZX bed narrowPeak conservative idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF159RHZ, ENCFF218RJK, ENCFF710KKZ 118286 ENCODE Processing Pipeline 321d5c28d1817a7bd38eee7a1389ba70 https://www.encodeproject.org/files/ENCFF414ZZX/@@download/ENCFF414ZZX.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF998YJY bed narrowPeak optimal idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF159RHZ, ENCFF218RJK, ENCFF710KKZ 145663 ENCODE Processing Pipeline 167456f68af8d185c73af8324361f14e https://www.encodeproject.org/files/ENCFF998YJY/@@download/ENCFF998YJY.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF615KWQ bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF657TZQ 7092343 ENCODE Processing Pipeline 165ccb4d4554a0ef081544a8b208531d https://www.encodeproject.org/files/ENCFF615KWQ/@@download/ENCFF615KWQ.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF567GWM bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF738AVH 7173717 ENCODE Processing Pipeline 4e4e39d3eb0eeab7e7cdca7904d8be90 https://www.encodeproject.org/files/ENCFF567GWM/@@download/ENCFF567GWM.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF532BAK bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF657TZQ, ENCFF738AVH 7279285 ENCODE Processing Pipeline 76b74493e2ff9ccc4724263d0fff29de https://www.encodeproject.org/files/ENCFF532BAK/@@download/ENCFF532BAK.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF535ZFM bed narrowPeak conservative idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF532BAK, ENCFF567GWM, ENCFF615KWQ 416129 ENCODE Processing Pipeline 7793c91cafb20c8e4171d421c299d5b2 https://www.encodeproject.org/files/ENCFF535ZFM/@@download/ENCFF535ZFM.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF260CBQ bed narrowPeak optimal idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF532BAK, ENCFF567GWM, ENCFF615KWQ 520138 ENCODE Processing Pipeline 5a37d6db72e31e29e52b6c2b83618f68 https://www.encodeproject.org/files/ENCFF260CBQ/@@download/ENCFF260CBQ.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF309SZA bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF891JGT 7176855 ENCODE Processing Pipeline 49d352536c4577a2bfc11622141afab3 https://www.encodeproject.org/files/ENCFF309SZA/@@download/ENCFF309SZA.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF720BVJ bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF057NCM, ENCFF581ZJL 7096882 ENCODE Processing Pipeline 5642da1c0113cedbfd494e26d8fe70cc https://www.encodeproject.org/files/ENCFF720BVJ/@@download/ENCFF720BVJ.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF924XOY bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF057NCM, ENCFF581ZJL, ENCFF891JGT 7301964 ENCODE Processing Pipeline 58942973d3f4e298ec657e05dafe9706 https://www.encodeproject.org/files/ENCFF924XOY/@@download/ENCFF924XOY.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF016XTQ bed narrowPeak conservative idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF309SZA, ENCFF720BVJ, ENCFF924XOY 424887 ENCODE Processing Pipeline b0a55b9cab5d1aecab294b47f21dbf87 https://www.encodeproject.org/files/ENCFF016XTQ/@@download/ENCFF016XTQ.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF340PPI bed narrowPeak optimal idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF309SZA, ENCFF720BVJ, ENCFF924XOY 530134 ENCODE Processing Pipeline 9a398398d2c9211d4896d977bf907b72 https://www.encodeproject.org/files/ENCFF340PPI/@@download/ENCFF340PPI.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF206YAY bed narrowPeak peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF211VZK 6806041 ENCODE Processing Pipeline 77d3f93e75ac9a5a243dc582a536b3e9 https://www.encodeproject.org/files/ENCFF206YAY/@@download/ENCFF206YAY.bed.gz hg19 released missing unfiltered alignments ENCFF717PAZ bed narrowPeak peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF211VZK, ENCFF581ZJL, ENCFF830OUU 7271899 ENCODE Processing Pipeline 1a6c6738d85a6ba4ed67a313a47dc166 https://www.encodeproject.org/files/ENCFF717PAZ/@@download/ENCFF717PAZ.bed.gz hg19 released missing unfiltered alignments ENCFF650AVU bed narrowPeak peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 1 ENCFF581ZJL, ENCFF830OUU 7034070 ENCODE Processing Pipeline 3303713b423e3d106d61bfd1c67f89ba https://www.encodeproject.org/files/ENCFF650AVU/@@download/ENCFF650AVU.bed.gz hg19 released missing unfiltered alignments ENCFF396NSO bed narrowPeak optimal idr thresholded peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF206YAY, ENCFF650AVU, ENCFF717PAZ 236021 ENCODE Processing Pipeline 5f23794b8e210ad0e5823f33ffb2f8af https://www.encodeproject.org/files/ENCFF396NSO/@@download/ENCFF396NSO.bed.gz hg19 released missing unfiltered alignments ENCFF197MBB bed narrowPeak conservative idr thresholded peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF206YAY, ENCFF650AVU, ENCFF717PAZ 138156 ENCODE Processing Pipeline e88f7403962c6a3d770ee05d4a726c7c https://www.encodeproject.org/files/ENCFF197MBB/@@download/ENCFF197MBB.bed.gz hg19 released missing unfiltered alignments ENCFF673SJH bed narrowPeak peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 1 ENCFF499CUL 6953013 ENCODE Processing Pipeline 08f5e078b6c900499d71e6a07aa99872 https://www.encodeproject.org/files/ENCFF673SJH/@@download/ENCFF673SJH.bed.gz GRCh38 released missing unfiltered alignments ENCFF402BVU bed narrowPeak peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 2 ENCFF904NPY 6665542 ENCODE Processing Pipeline 602fb8db9f4d0338f4411a2548085cf4 https://www.encodeproject.org/files/ENCFF402BVU/@@download/ENCFF402BVU.bed.gz GRCh38 released missing unfiltered alignments ENCFF409DGD bed narrowPeak peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 1, 2 ENCFF499CUL, ENCFF904NPY 7269711 ENCODE Processing Pipeline 850c34b48f75d7d1e31b7f17441c5dc7 https://www.encodeproject.org/files/ENCFF409DGD/@@download/ENCFF409DGD.bed.gz GRCh38 released missing unfiltered alignments ENCFF998GIO bed narrowPeak conservative idr thresholded peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 1, 2 ENCFF402BVU, ENCFF409DGD, ENCFF419RSJ, ENCFF673SJH 139372 ENCODE Processing Pipeline 338274a4591e204da427ee757c9c1259 https://www.encodeproject.org/files/ENCFF998GIO/@@download/ENCFF998GIO.bed.gz GRCh38 released missing unfiltered alignments ENCFF689LNQ bed narrowPeak optimal idr thresholded peaks ENCSR090JNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HLTF-human ENCAB902OZZ DNA False 2016-09-01 ENCODE 1, 2 ENCFF402BVU, ENCFF409DGD, ENCFF419RSJ, ENCFF673SJH 237629 ENCODE Processing Pipeline 0fc275ea9102fbc6b6ac690099d14140 https://www.encodeproject.org/files/ENCFF689LNQ/@@download/ENCFF689LNQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF794VUJ bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF882JOI 6789866 ENCODE Processing Pipeline 235c938786e379e416bcee3bb756c555 https://www.encodeproject.org/files/ENCFF794VUJ/@@download/ENCFF794VUJ.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF731JDO bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF724MBT 7095383 ENCODE Processing Pipeline c35cf7cbae9e72bc00e9688c8705e0b5 https://www.encodeproject.org/files/ENCFF731JDO/@@download/ENCFF731JDO.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF116JUN bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF724MBT, ENCFF882JOI 7182225 ENCODE Processing Pipeline 26d260ae9ace801d7f8f70505b4ac162 https://www.encodeproject.org/files/ENCFF116JUN/@@download/ENCFF116JUN.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF203LQZ bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF337GMY, ENCFF910IKB 6694355 ENCODE Processing Pipeline 6c59a8dd3c781dd837f77a4acaf8de66 https://www.encodeproject.org/files/ENCFF203LQZ/@@download/ENCFF203LQZ.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF108OPZ bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF821HMU 6987127 ENCODE Processing Pipeline 311ca73985eaf262135fa6bfdacbc782 https://www.encodeproject.org/files/ENCFF108OPZ/@@download/ENCFF108OPZ.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF535XLA bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF337GMY, ENCFF821HMU, ENCFF910IKB 7170867 ENCODE Processing Pipeline c39a1d202f0d89978725ae91400bb3e4 https://www.encodeproject.org/files/ENCFF535XLA/@@download/ENCFF535XLA.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF460GYT bed narrowPeak conservative idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF108OPZ, ENCFF203LQZ, ENCFF419RSJ, ENCFF535XLA 517105 ENCODE Processing Pipeline 226e8cfa8460f75225beeffe80341297 https://www.encodeproject.org/files/ENCFF460GYT/@@download/ENCFF460GYT.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF543STN bed narrowPeak optimal idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF108OPZ, ENCFF203LQZ, ENCFF419RSJ, ENCFF535XLA 617859 ENCODE Processing Pipeline a0c264cf57e6f232c64edeacf60a911a https://www.encodeproject.org/files/ENCFF543STN/@@download/ENCFF543STN.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF431NKM bed narrowPeak conservative idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF116JUN, ENCFF731JDO, ENCFF794VUJ 453909 ENCODE Processing Pipeline 722ddcaa9d45655ee854d37daf3626ec https://www.encodeproject.org/files/ENCFF431NKM/@@download/ENCFF431NKM.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF638YFC bed narrowPeak optimal idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF116JUN, ENCFF731JDO, ENCFF794VUJ 549409 ENCODE Processing Pipeline 251eed7221822cb7a11fd6e446f1ffc8 https://www.encodeproject.org/files/ENCFF638YFC/@@download/ENCFF638YFC.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF363AAC bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF155TVA, ENCFF160VXC, ENCFF411OFR, ENCFF834TUP 7321973 ENCODE Processing Pipeline 261290cb05031626787a10c961837e83 https://www.encodeproject.org/files/ENCFF363AAC/@@download/ENCFF363AAC.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF537WLH bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF411OFR, ENCFF834TUP 7140162 ENCODE Processing Pipeline 7beca13c72ab6a9518c4c80fa839c534 https://www.encodeproject.org/files/ENCFF537WLH/@@download/ENCFF537WLH.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF575STA bed narrowPeak conservative idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF322TVZ, ENCFF363AAC, ENCFF537WLH 565107 ENCODE Processing Pipeline 7658d629e977de0e2c608c86a1920c23 https://www.encodeproject.org/files/ENCFF575STA/@@download/ENCFF575STA.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF273TYA bed narrowPeak optimal idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF322TVZ, ENCFF363AAC, ENCFF537WLH 662184 ENCODE Processing Pipeline c8ba92b030fc5472424b29f32f637dc7 https://www.encodeproject.org/files/ENCFF273TYA/@@download/ENCFF273TYA.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF322TVZ bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF155TVA, ENCFF160VXC 7093766 ENCODE Processing Pipeline ab63538dc764ed73d698c6004ed4af4a https://www.encodeproject.org/files/ENCFF322TVZ/@@download/ENCFF322TVZ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF277ZUZ bed narrowPeak conservative idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF560EPF, ENCFF643KVK, ENCFF667UFY 566076 ENCODE Processing Pipeline 1f41526ccf454592ac24daf2566523ca https://www.encodeproject.org/files/ENCFF277ZUZ/@@download/ENCFF277ZUZ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF643KVK bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF437IVZ, ENCFF712WXB 7144969 ENCODE Processing Pipeline 2714f0cdd850717c1e557c05841baca7 https://www.encodeproject.org/files/ENCFF643KVK/@@download/ENCFF643KVK.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF667UFY bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF119ZDI, ENCFF437IVZ, ENCFF712WXB, ENCFF790TAN 7325831 ENCODE Processing Pipeline e662190e6c4fff0ba83c9f6821d340a6 https://www.encodeproject.org/files/ENCFF667UFY/@@download/ENCFF667UFY.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF972UGK bed narrowPeak optimal idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF560EPF, ENCFF643KVK, ENCFF667UFY 677044 ENCODE Processing Pipeline 719a9d4a46c1991103ec3136bde2c0ef https://www.encodeproject.org/files/ENCFF972UGK/@@download/ENCFF972UGK.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560EPF bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF119ZDI, ENCFF790TAN 7097761 ENCODE Processing Pipeline 954d1a3724e8b484b33be1b93c69c9b9 https://www.encodeproject.org/files/ENCFF560EPF/@@download/ENCFF560EPF.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF002CME bed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 342030 ENCODE Consortium Analysis Working Group 30d95e9beac104673ddddd030762942b https://www.encodeproject.org/files/ENCFF002CME/@@download/ENCFF002CME.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF836ATN bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF665EXC 6196481 ENCODE Processing Pipeline cf5ad2caed13eecb0451f34aa62b80f1 https://www.encodeproject.org/files/ENCFF836ATN/@@download/ENCFF836ATN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length biological replicates with identical biosample ENCFF747XLZ bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF568RDF 6630979 ENCODE Processing Pipeline ee1d7f7b2940d61745d4c49f19426578 https://www.encodeproject.org/files/ENCFF747XLZ/@@download/ENCFF747XLZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length biological replicates with identical biosample ENCFF567VBY bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF568RDF, ENCFF665EXC 6906555 ENCODE Processing Pipeline ce4d8a7d74914fb9f611be77bb32e571 https://www.encodeproject.org/files/ENCFF567VBY/@@download/ENCFF567VBY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length biological replicates with identical biosample ENCFF056DZM bed narrowPeak conservative idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF567VBY, ENCFF747XLZ, ENCFF836ATN 292624 ENCODE Processing Pipeline a04015dacc8ce1a693d658f9fb715acd https://www.encodeproject.org/files/ENCFF056DZM/@@download/ENCFF056DZM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length biological replicates with identical biosample ENCFF118HUH bed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF567VBY, ENCFF747XLZ, ENCFF836ATN 357044 ENCODE Processing Pipeline 1040399115870575346daaba5c6bc46a https://www.encodeproject.org/files/ENCFF118HUH/@@download/ENCFF118HUH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent platforms, low read length biological replicates with identical biosample ENCFF001VNL bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 777725 Michael Snyder, Stanford c9ce493872b283bdc57102c6469aed39 https://www.encodeproject.org/files/ENCFF001VNL/@@download/ENCFF001VNL.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing derived_from, mismatched file status, biological replicates with identical biosample, file validation error ENCFF002CWW bed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 217639 ENCODE Consortium Analysis Working Group 7abe5f941557c480b288e4e5411459e0 https://www.encodeproject.org/files/ENCFF002CWW/@@download/ENCFF002CWW.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing derived_from, mismatched file status, biological replicates with identical biosample, file validation error ENCFF540WNN bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF792CXJ, ENCFF998GMZ 4768546 ENCODE Processing Pipeline 3a3c724d61ca08071aeab0017094a2ed https://www.encodeproject.org/files/ENCFF540WNN/@@download/ENCFF540WNN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched file status, biological replicates with identical biosample, file validation error ENCFF517QNU bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF026NGK, ENCFF998GMZ 4438555 ENCODE Processing Pipeline 3214b84988940e0c8d9440e92627a546 https://www.encodeproject.org/files/ENCFF517QNU/@@download/ENCFF517QNU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched file status, biological replicates with identical biosample, file validation error ENCFF680ENZ bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF026NGK, ENCFF792CXJ, ENCFF998GMZ 5406424 ENCODE Processing Pipeline 8a2bec40813cb8b250df6663b3781b79 https://www.encodeproject.org/files/ENCFF680ENZ/@@download/ENCFF680ENZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched file status, biological replicates with identical biosample, file validation error ENCFF546ZGF bed narrowPeak conservative idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF025ZWJ, ENCFF517QNU, ENCFF920BWA 192279 ENCODE Processing Pipeline f63ed3aa130f8f9f7736195158053c26 https://www.encodeproject.org/files/ENCFF546ZGF/@@download/ENCFF546ZGF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched status, mismatched file status, biological replicates with identical biosample, file validation error ENCFF909LKK bed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF025ZWJ, ENCFF517QNU, ENCFF920BWA 231075 ENCODE Processing Pipeline c977d55edfbe570ff2123255d9b82488 https://www.encodeproject.org/files/ENCFF909LKK/@@download/ENCFF909LKK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched status, mismatched file status, biological replicates with identical biosample, file validation error ENCFF172XHL bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF244IJF, ENCFF259RRK 5357987 ENCODE Processing Pipeline 460d44c7bdba7887a4c5b3ad35750b0f https://www.encodeproject.org/files/ENCFF172XHL/@@download/ENCFF172XHL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched file status, biological replicates with identical biosample, file validation error ENCFF816CMK bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF259RRK 4742350 ENCODE Processing Pipeline 641168b46cbb841aa69ad60152907f10 https://www.encodeproject.org/files/ENCFF816CMK/@@download/ENCFF816CMK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched file status, biological replicates with identical biosample, file validation error ENCFF928TBI bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF244IJF 4429693 ENCODE Processing Pipeline 5f66e8cf8fb59691a3d991b9e9dcc587 https://www.encodeproject.org/files/ENCFF928TBI/@@download/ENCFF928TBI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched file status, biological replicates with identical biosample, file validation error ENCFF736MBF bed narrowPeak conservative idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF172XHL, ENCFF419RSJ, ENCFF816CMK, ENCFF928TBI 187311 ENCODE Processing Pipeline 721befe204f5cd95a7645193dc86ebf1 https://www.encodeproject.org/files/ENCFF736MBF/@@download/ENCFF736MBF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched file status, biological replicates with identical biosample, file validation error ENCFF978BBL bed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon alpha IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF172XHL, ENCFF419RSJ, ENCFF816CMK, ENCFF928TBI 222922 ENCODE Processing Pipeline 3cf058dd9ea7d55c1849293e4292fee6 https://www.encodeproject.org/files/ENCFF978BBL/@@download/ENCFF978BBL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length mismatched file status, biological replicates with identical biosample, file validation error ENCFF886YGC bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF247YFL, ENCFF878UKW 6487146 ENCODE Processing Pipeline 2be9aa46645d6ea3e6ef3df84c27ffa2 https://www.encodeproject.org/files/ENCFF886YGC/@@download/ENCFF886YGC.bed.gz GRCh38 released missing unfiltered alignments ENCFF563YTX bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF247YFL, ENCFF378QWS 6629776 ENCODE Processing Pipeline 05a7ca4e0219e56ce7ced16bef428130 https://www.encodeproject.org/files/ENCFF563YTX/@@download/ENCFF563YTX.bed.gz GRCh38 released missing unfiltered alignments ENCFF344ZPO bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF247YFL, ENCFF378QWS, ENCFF878UKW 7132314 ENCODE Processing Pipeline 5843c2c157da38dfd0a9cca3056136b7 https://www.encodeproject.org/files/ENCFF344ZPO/@@download/ENCFF344ZPO.bed.gz GRCh38 released missing unfiltered alignments ENCFF625FYY bed narrowPeak conservative idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF344ZPO, ENCFF419RSJ, ENCFF563YTX, ENCFF886YGC 161924 ENCODE Processing Pipeline 2bb0ea95ed7946957ca896cbc0262448 https://www.encodeproject.org/files/ENCFF625FYY/@@download/ENCFF625FYY.bed.gz GRCh38 released missing unfiltered alignments ENCFF287GDT bed narrowPeak optimal idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF344ZPO, ENCFF419RSJ, ENCFF563YTX, ENCFF886YGC 219361 ENCODE Processing Pipeline f8a5c7ac5b7fc36191a5f8785030e1dd https://www.encodeproject.org/files/ENCFF287GDT/@@download/ENCFF287GDT.bed.gz GRCh38 released missing unfiltered alignments ENCFF830SMA bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF675KUA, ENCFF929AIJ 6484837 ENCODE Processing Pipeline 9f337526edf3461d6521791dee0f24c5 https://www.encodeproject.org/files/ENCFF830SMA/@@download/ENCFF830SMA.bed.gz hg19 released missing unfiltered alignments ENCFF255LGM bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF630NYB, ENCFF675KUA, ENCFF929AIJ 7130529 ENCODE Processing Pipeline 6e83c1b938f397820dbf794db89f4c4d https://www.encodeproject.org/files/ENCFF255LGM/@@download/ENCFF255LGM.bed.gz hg19 released missing unfiltered alignments ENCFF581HPR bed narrowPeak conservative idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF255LGM, ENCFF830SMA, ENCFF842XXA 164735 ENCODE Processing Pipeline 117180912cb7d5c4f8bb975ca6ee83f9 https://www.encodeproject.org/files/ENCFF581HPR/@@download/ENCFF581HPR.bed.gz hg19 released missing unfiltered alignments ENCFF842XXA bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF630NYB, ENCFF675KUA 6676264 ENCODE Processing Pipeline f94f0bcb0b973bf3126547a8d5a59a2e https://www.encodeproject.org/files/ENCFF842XXA/@@download/ENCFF842XXA.bed.gz hg19 released missing unfiltered alignments ENCFF717TWA bed narrowPeak optimal idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF255LGM, ENCFF830SMA, ENCFF842XXA 221756 ENCODE Processing Pipeline d6e556ebcba694582483815e5740993f https://www.encodeproject.org/files/ENCFF717TWA/@@download/ENCFF717TWA.bed.gz hg19 released missing unfiltered alignments ENCFF692UVD bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF325CNX, ENCFF889DCH 5715951 ENCODE Processing Pipeline a0705a7ca020cfd57a0ac4792910889f https://www.encodeproject.org/files/ENCFF692UVD/@@download/ENCFF692UVD.bed.gz hg19 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF894WLR bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF103MEZ, ENCFF502LLI 5826405 ENCODE Processing Pipeline ff8b608eefb951b37466226b0b1091bd https://www.encodeproject.org/files/ENCFF894WLR/@@download/ENCFF894WLR.bed.gz hg19 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF310EMX bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF103MEZ, ENCFF325CNX, ENCFF502LLI, ENCFF889DCH 7122157 ENCODE Processing Pipeline d4f5f5d1c4cf8cc5828d8a3357a35691 https://www.encodeproject.org/files/ENCFF310EMX/@@download/ENCFF310EMX.bed.gz hg19 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF785ACI bed narrowPeak conservative idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF001TDO, ENCFF310EMX, ENCFF692UVD, ENCFF894WLR 119841 ENCODE Processing Pipeline ad820677d3eca6a165b3fe883114c783 https://www.encodeproject.org/files/ENCFF785ACI/@@download/ENCFF785ACI.bed.gz hg19 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF520LVQ bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF895DLK 5693207 ENCODE Processing Pipeline 53608b8841d1ed2f0b04bd38491b88a1 https://www.encodeproject.org/files/ENCFF520LVQ/@@download/ENCFF520LVQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF406DQD bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF367OYT 5715249 ENCODE Processing Pipeline 6e837f49c821c5cfb45cf8e6e6192403 https://www.encodeproject.org/files/ENCFF406DQD/@@download/ENCFF406DQD.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF648YCS bed narrowPeak conservative idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF406DQD, ENCFF419RSJ, ENCFF520LVQ, ENCFF817OVD 124115 ENCODE Processing Pipeline aa47afd5ccde8dc9dd799a5d2979c711 https://www.encodeproject.org/files/ENCFF648YCS/@@download/ENCFF648YCS.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF817OVD bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF367OYT, ENCFF895DLK 7118090 ENCODE Processing Pipeline 589824b589c74b441b636d444acb40f6 https://www.encodeproject.org/files/ENCFF817OVD/@@download/ENCFF817OVD.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF417RQZ bed narrowPeak optimal idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF406DQD, ENCFF419RSJ, ENCFF520LVQ, ENCFF817OVD 124739 ENCODE Processing Pipeline f345e7332fcc3325d1877c89f65a3cfb https://www.encodeproject.org/files/ENCFF417RQZ/@@download/ENCFF417RQZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, low read length experiment not submitted to GEO insufficient read depth, poor library complexity, severe bottlenecking ENCFF001VOA bed narrowPeak peaks ENCSR000EHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 153955 Michael Snyder, Stanford 133a4cc0e03b29a4e74f205c43065d81 https://www.encodeproject.org/files/ENCFF001VOA/@@download/ENCFF001VOA.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF002CXK bed narrowPeak optimal idr thresholded peaks ENCSR000EHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 109592 ENCODE Consortium Analysis Working Group c8f1ed8026f89575c0dd034a4de3974c https://www.encodeproject.org/files/ENCFF002CXK/@@download/ENCFF002CXK.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF001VMB bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1400659 Michael Snyder, Stanford 46c2e41f59e8c2e9cdceddfe7dd8ab4c https://www.encodeproject.org/files/ENCFF001VMB/@@download/ENCFF001VMB.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample, NTR biosample ENCFF002CVQ bed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 558105 ENCODE Consortium Analysis Working Group bc87d5c569c83dc64331f326019fb4d7 https://www.encodeproject.org/files/ENCFF002CVQ/@@download/ENCFF002CVQ.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample, NTR biosample ENCFF368XWG bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF106IJG, ENCFF710NTS 5431250 ENCODE Processing Pipeline 03e3bc481010a522f0be761ea0c49ec1 https://www.encodeproject.org/files/ENCFF368XWG/@@download/ENCFF368XWG.bed.gz hg19 released low read length biological replicates with identical biosample, NTR biosample ENCFF179NDS bed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF077KRK, ENCFF159GKF, ENCFF368XWG 491465 ENCODE Processing Pipeline 8a7b06a474913c6365c15ef047a6db83 https://www.encodeproject.org/files/ENCFF179NDS/@@download/ENCFF179NDS.bed.gz hg19 released low read length biological replicates with identical biosample, NTR biosample ENCFF077KRK bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF823NIQ 5501529 ENCODE Processing Pipeline 1e02c94c7e82b16b361f512039fdb43a https://www.encodeproject.org/files/ENCFF077KRK/@@download/ENCFF077KRK.bed.gz hg19 released low read length biological replicates with identical biosample, NTR biosample ENCFF432TSX bed narrowPeak conservative idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF077KRK, ENCFF159GKF, ENCFF368XWG 463671 ENCODE Processing Pipeline 3b2345fad1e34528d67696019967b345 https://www.encodeproject.org/files/ENCFF432TSX/@@download/ENCFF432TSX.bed.gz hg19 released low read length biological replicates with identical biosample, NTR biosample ENCFF159GKF bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF106IJG, ENCFF710NTS, ENCFF823NIQ 6320048 ENCODE Processing Pipeline cd322e707233bb8dcec5b05765ff167b https://www.encodeproject.org/files/ENCFF159GKF/@@download/ENCFF159GKF.bed.gz hg19 released low read length biological replicates with identical biosample, NTR biosample ENCFF585OPQ bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF213JOK 5407285 ENCODE Processing Pipeline c890a3dc305a9edbe1ac47477a532968 https://www.encodeproject.org/files/ENCFF585OPQ/@@download/ENCFF585OPQ.bed.gz GRCh38 released low read length biological replicates with identical biosample, NTR biosample ENCFF534PVK bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF213JOK, ENCFF988VSQ 6244298 ENCODE Processing Pipeline 52c8c7653f45314b85b70264e9cf1009 https://www.encodeproject.org/files/ENCFF534PVK/@@download/ENCFF534PVK.bed.gz GRCh38 released low read length biological replicates with identical biosample, NTR biosample ENCFF511YJO bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF988VSQ 5500702 ENCODE Processing Pipeline 195a2e7c630e89781c657037aad79ef9 https://www.encodeproject.org/files/ENCFF511YJO/@@download/ENCFF511YJO.bed.gz GRCh38 released low read length biological replicates with identical biosample, NTR biosample ENCFF819MHF bed narrowPeak conservative idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF511YJO, ENCFF534PVK, ENCFF585OPQ 436302 ENCODE Processing Pipeline 599c61554f65d243f3bc3523570e2707 https://www.encodeproject.org/files/ENCFF819MHF/@@download/ENCFF819MHF.bed.gz GRCh38 released low read length biological replicates with identical biosample, NTR biosample ENCFF477JTV bed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF511YJO, ENCFF534PVK, ENCFF585OPQ 466109 ENCODE Processing Pipeline eee6b076fbdd11c420adab6839341636 https://www.encodeproject.org/files/ENCFF477JTV/@@download/ENCFF477JTV.bed.gz GRCh38 released low read length biological replicates with identical biosample, NTR biosample ENCFF001VNH bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 798205 Michael Snyder, Stanford 0b23a5f7826f7719d4c7b71a54db8c89 https://www.encodeproject.org/files/ENCFF001VNH/@@download/ENCFF001VNH.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF912AHN bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF906VXN 4867217 ENCODE Processing Pipeline 9166549a0bef72476e102ad417f38e98 https://www.encodeproject.org/files/ENCFF912AHN/@@download/ENCFF912AHN.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF317AIN bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF042SFT, ENCFF710NTS 4992350 ENCODE Processing Pipeline 9fe7d779b69b121ed7b469075d758d9e https://www.encodeproject.org/files/ENCFF317AIN/@@download/ENCFF317AIN.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF386FIZ bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF042SFT, ENCFF710NTS, ENCFF906VXN 3510066 ENCODE Processing Pipeline 13d3449b2c1f2a3d85f276c4dff934a0 https://www.encodeproject.org/files/ENCFF386FIZ/@@download/ENCFF386FIZ.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF780MBM bed narrowPeak conservative idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF317AIN, ENCFF386FIZ, ENCFF912AHN 226888 ENCODE Processing Pipeline dca636cdd0e2849e9463ecb02a718f08 https://www.encodeproject.org/files/ENCFF780MBM/@@download/ENCFF780MBM.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF474NLG bed narrowPeak optimal idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF317AIN, ENCFF386FIZ, ENCFF912AHN 236039 ENCODE Processing Pipeline fe108db88c03657b64f8b0ec52bd7c3e https://www.encodeproject.org/files/ENCFF474NLG/@@download/ENCFF474NLG.bed.gz hg19 released low read depth, low read length biological replicates with identical biosample ENCFF597CNC bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF023NGN, ENCFF976DWY 5003141 ENCODE Processing Pipeline c3ef2be2351d104b4fee1a07992f1793 https://www.encodeproject.org/files/ENCFF597CNC/@@download/ENCFF597CNC.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF734CJH bed narrowPeak conservative idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF138HLO, ENCFF419RSJ, ENCFF587HWD, ENCFF597CNC 227045 ENCODE Processing Pipeline 3e156bea19565d96dcbe468174d3ce4e https://www.encodeproject.org/files/ENCFF734CJH/@@download/ENCFF734CJH.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF167RXK bed narrowPeak optimal idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF138HLO, ENCFF419RSJ, ENCFF587HWD, ENCFF597CNC 231740 ENCODE Processing Pipeline 9fb1d6927269b28a07d2a4418fb2486b https://www.encodeproject.org/files/ENCFF167RXK/@@download/ENCFF167RXK.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF587HWD bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF023NGN, ENCFF068XVC 4862254 ENCODE Processing Pipeline b60c9ca96400e0311c85b087cf7f6d5d https://www.encodeproject.org/files/ENCFF587HWD/@@download/ENCFF587HWD.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF138HLO bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF023NGN, ENCFF068XVC, ENCFF976DWY 3501333 ENCODE Processing Pipeline 4eab57df1806b70d1e94a62b440a02d2 https://www.encodeproject.org/files/ENCFF138HLO/@@download/ENCFF138HLO.bed.gz GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF860KMP bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF853EMP 6406002 ENCODE Processing Pipeline d30d79c50d0e12b2f2743ff47d3af71d https://www.encodeproject.org/files/ENCFF860KMP/@@download/ENCFF860KMP.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF222PPL bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF581ZJL, ENCFF989OSX 6412170 ENCODE Processing Pipeline f703f936ce9333620ca52565db1f4a11 https://www.encodeproject.org/files/ENCFF222PPL/@@download/ENCFF222PPL.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF786MKH bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF853EMP, ENCFF989OSX 7165721 ENCODE Processing Pipeline f5b2581e60dd754101ff2cf93317003e https://www.encodeproject.org/files/ENCFF786MKH/@@download/ENCFF786MKH.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF524BVG bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF502NAY, ENCFF910IKB 6285306 ENCODE Processing Pipeline c19dae0e19a1dae0cd68b54ed60295f6 https://www.encodeproject.org/files/ENCFF524BVG/@@download/ENCFF524BVG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF913QZG bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF046ACV, ENCFF227IZS 6280116 ENCODE Processing Pipeline e466bc2e046a0bd805a23d8b9aefe247 https://www.encodeproject.org/files/ENCFF913QZG/@@download/ENCFF913QZG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF982UTK bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF046ACV, ENCFF227IZS, ENCFF502NAY, ENCFF910IKB 7127557 ENCODE Processing Pipeline 014ba2bc893f64ca2a21fe2e666a3a9e https://www.encodeproject.org/files/ENCFF982UTK/@@download/ENCFF982UTK.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF558HHY bed narrowPeak conservative idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF524BVG, ENCFF913QZG, ENCFF982UTK 157189 ENCODE Processing Pipeline 3eb93e46e6d41c359a5d4174b89899ef https://www.encodeproject.org/files/ENCFF558HHY/@@download/ENCFF558HHY.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF010OOE bed narrowPeak optimal idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF524BVG, ENCFF913QZG, ENCFF982UTK 209209 ENCODE Processing Pipeline c13baaaec9ca12f5c386ff6409336470 https://www.encodeproject.org/files/ENCFF010OOE/@@download/ENCFF010OOE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF419FNX bed narrowPeak conservative idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF222PPL, ENCFF786MKH, ENCFF860KMP 129320 ENCODE Processing Pipeline 0deb1f296b994a9298e1eb724825fc43 https://www.encodeproject.org/files/ENCFF419FNX/@@download/ENCFF419FNX.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF676NPW bed narrowPeak optimal idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF222PPL, ENCFF786MKH, ENCFF860KMP 171892 ENCODE Processing Pipeline b2426299acedb3521638e6d425f68ba5 https://www.encodeproject.org/files/ENCFF676NPW/@@download/ENCFF676NPW.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF993AXA bed narrowPeak peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 1 ENCFF209NVH, ENCFF581ZJL 6589416 ENCODE Processing Pipeline 09f40e73aa3aacccc6e11cc03b216863 https://www.encodeproject.org/files/ENCFF993AXA/@@download/ENCFF993AXA.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF629PBS bed narrowPeak peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 2 ENCFF537SUS, ENCFF581ZJL 6737537 ENCODE Processing Pipeline 32fd453d458d08a55581dd51695123e9 https://www.encodeproject.org/files/ENCFF629PBS/@@download/ENCFF629PBS.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF079BRC bed narrowPeak peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 1, 2 ENCFF209NVH, ENCFF537SUS, ENCFF581ZJL 7156178 ENCODE Processing Pipeline a782f822abd13af214836ae39d81095e https://www.encodeproject.org/files/ENCFF079BRC/@@download/ENCFF079BRC.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF697LDV bed narrowPeak conservative idr thresholded peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF079BRC, ENCFF629PBS, ENCFF993AXA 57294 ENCODE Processing Pipeline 8d42b837c0516cd649e04e47bf8300f7 https://www.encodeproject.org/files/ENCFF697LDV/@@download/ENCFF697LDV.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF574LAO bed narrowPeak optimal idr thresholded peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF079BRC, ENCFF629PBS, ENCFF993AXA 107127 ENCODE Processing Pipeline 5df7ecbbd51099a146da54647bf22ee6 https://www.encodeproject.org/files/ENCFF574LAO/@@download/ENCFF574LAO.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF402TIE bed narrowPeak peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 1 ENCFF541OEZ, ENCFF910IKB 6444703 ENCODE Processing Pipeline c69c5f980b7426c943cc6aa46ea50eeb https://www.encodeproject.org/files/ENCFF402TIE/@@download/ENCFF402TIE.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF808UCQ bed narrowPeak peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 2 ENCFF063VLB, ENCFF910IKB 6579628 ENCODE Processing Pipeline fe778dbd99a6d6c7c771c9516497e94b https://www.encodeproject.org/files/ENCFF808UCQ/@@download/ENCFF808UCQ.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF129LFO bed narrowPeak peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 1, 2 ENCFF063VLB, ENCFF541OEZ, ENCFF910IKB 7116815 ENCODE Processing Pipeline d245fc5a577548a23ad629401ba9b4d0 https://www.encodeproject.org/files/ENCFF129LFO/@@download/ENCFF129LFO.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF658JOH bed narrowPeak conservative idr thresholded peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 1, 2 ENCFF129LFO, ENCFF402TIE, ENCFF419RSJ, ENCFF808UCQ 54821 ENCODE Processing Pipeline aa793e507b8faed61ca1c7863b6e3c2c https://www.encodeproject.org/files/ENCFF658JOH/@@download/ENCFF658JOH.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF514DDG bed narrowPeak optimal idr thresholded peaks ENCSR213VUI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM25-human ENCAB562YGS DNA False 2016-10-31 ENCODE 1, 2 ENCFF129LFO, ENCFF402TIE, ENCFF419RSJ, ENCFF808UCQ 94955 ENCODE Processing Pipeline a0fc375177d1b51c260fb692e5c53d0d https://www.encodeproject.org/files/ENCFF514DDG/@@download/ENCFF514DDG.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF241QBV bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF775ZRK, ENCFF891YJS 6254539 ENCODE Processing Pipeline c7fb7fb7e8669a0f4968aeb0331a514c https://www.encodeproject.org/files/ENCFF241QBV/@@download/ENCFF241QBV.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF074NKQ bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF702YSS, ENCFF891YJS 6763727 ENCODE Processing Pipeline 4fcc50d833fbd8658c629457a34785d8 https://www.encodeproject.org/files/ENCFF074NKQ/@@download/ENCFF074NKQ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF769RKU bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF702YSS, ENCFF775ZRK, ENCFF891YJS 7077032 ENCODE Processing Pipeline 67c5bc0bfa084f885cf4b8f972beb88e https://www.encodeproject.org/files/ENCFF769RKU/@@download/ENCFF769RKU.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF585YJH bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF251EVS, ENCFF383YOE, ENCFF619SRD 6980123 ENCODE Processing Pipeline b25ae3e587fa1b3b695b5a26d8d5895d https://www.encodeproject.org/files/ENCFF585YJH/@@download/ENCFF585YJH.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF486DBE bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF251EVS, ENCFF383YOE 6067115 ENCODE Processing Pipeline 6b84b48b88aa8a9c5c12e65cdbb59469 https://www.encodeproject.org/files/ENCFF486DBE/@@download/ENCFF486DBE.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF377MIJ bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF383YOE, ENCFF619SRD 6589744 ENCODE Processing Pipeline 0a96540658c319201364b42b128d28cb https://www.encodeproject.org/files/ENCFF377MIJ/@@download/ENCFF377MIJ.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF066UQP bed narrowPeak conservative idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF377MIJ, ENCFF419RSJ, ENCFF486DBE, ENCFF585YJH 366230 ENCODE Processing Pipeline c8b54cbeda8665b5f65875b54ca91909 https://www.encodeproject.org/files/ENCFF066UQP/@@download/ENCFF066UQP.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF256CVB bed narrowPeak optimal idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF377MIJ, ENCFF419RSJ, ENCFF486DBE, ENCFF585YJH 368974 ENCODE Processing Pipeline d1a0dc47db40aa571af027ea0b93d037 https://www.encodeproject.org/files/ENCFF256CVB/@@download/ENCFF256CVB.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF140VIF bed narrowPeak conservative idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF074NKQ, ENCFF241QBV, ENCFF769RKU 308977 ENCODE Processing Pipeline 3d0685831059d13fc3b7a4f661551f7a https://www.encodeproject.org/files/ENCFF140VIF/@@download/ENCFF140VIF.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF526EEI bed narrowPeak optimal idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF074NKQ, ENCFF241QBV, ENCFF769RKU 313782 ENCODE Processing Pipeline 1f4cf632566898df354da40c0e111751 https://www.encodeproject.org/files/ENCFF526EEI/@@download/ENCFF526EEI.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF532RNU bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF490XTX, ENCFF910IKB 7108405 ENCODE Processing Pipeline d562ca45bb58dc624a64faa51f0bd61f https://www.encodeproject.org/files/ENCFF532RNU/@@download/ENCFF532RNU.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF365OEO bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF227IZS, ENCFF258DFY 6680109 ENCODE Processing Pipeline 436eeca6ef723befcb0af3718861549c https://www.encodeproject.org/files/ENCFF365OEO/@@download/ENCFF365OEO.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF711LIH bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF227IZS, ENCFF258DFY, ENCFF490XTX, ENCFF910IKB 7266016 ENCODE Processing Pipeline 78e8152816e1e52dc89aab67c38072a7 https://www.encodeproject.org/files/ENCFF711LIH/@@download/ENCFF711LIH.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF446YER bed narrowPeak conservative idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF365OEO, ENCFF419RSJ, ENCFF532RNU, ENCFF711LIH 222312 ENCODE Processing Pipeline 255d56b1e5d669c149171265fdfbe76f https://www.encodeproject.org/files/ENCFF446YER/@@download/ENCFF446YER.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF655EFA bed narrowPeak optimal idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF365OEO, ENCFF419RSJ, ENCFF532RNU, ENCFF711LIH 304147 ENCODE Processing Pipeline e59659a28b1920affc1dc60214f358c4 https://www.encodeproject.org/files/ENCFF655EFA/@@download/ENCFF655EFA.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF848FSH bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF921BVG, ENCFF948XRU 7260496 ENCODE Processing Pipeline 6ed6bde5b6fce4621dd2e4bb9a8bc089 https://www.encodeproject.org/files/ENCFF848FSH/@@download/ENCFF848FSH.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF032MDN bed narrowPeak conservative idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF505URD, ENCFF829KFC, ENCFF848FSH 219423 ENCODE Processing Pipeline c0ba57087eddfc09918d0b562f256a94 https://www.encodeproject.org/files/ENCFF032MDN/@@download/ENCFF032MDN.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF829KFC bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF051LWI, ENCFF921BVG 6680008 ENCODE Processing Pipeline 9916a25b6b7c1363fbfb629df670f9c3 https://www.encodeproject.org/files/ENCFF829KFC/@@download/ENCFF829KFC.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF471ZTZ bed narrowPeak optimal idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF505URD, ENCFF829KFC, ENCFF848FSH 309156 ENCODE Processing Pipeline 720a3ea4fe1bb47e81c212a2969a67f6 https://www.encodeproject.org/files/ENCFF471ZTZ/@@download/ENCFF471ZTZ.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF505URD bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF581ZJL, ENCFF948XRU 7107880 ENCODE Processing Pipeline daaf9e7a697b0d64edcb01c4a0f21f2a https://www.encodeproject.org/files/ENCFF505URD/@@download/ENCFF505URD.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF898ILE bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF175TNH, ENCFF581ZJL, ENCFF720PEL 7151903 ENCODE Processing Pipeline f7621d311206eb0618a9bca6441fb0c1 https://www.encodeproject.org/files/ENCFF898ILE/@@download/ENCFF898ILE.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF244YZX bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF175TNH, ENCFF581ZJL 6318220 ENCODE Processing Pipeline 7690abbf3fc7c97d08a017e957604a05 https://www.encodeproject.org/files/ENCFF244YZX/@@download/ENCFF244YZX.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF050TDD bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF720PEL 6579727 ENCODE Processing Pipeline ef27ea44e3d30e879a25641255d79101 https://www.encodeproject.org/files/ENCFF050TDD/@@download/ENCFF050TDD.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF367RSU bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF019RWB, ENCFF910IKB 6175526 ENCODE Processing Pipeline 68afc59870a0384a45b17e4f50939bcc https://www.encodeproject.org/files/ENCFF367RSU/@@download/ENCFF367RSU.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF471OVB bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF353EFN 6427343 ENCODE Processing Pipeline 21e810e7ea49a4074f863f29ba8cbe48 https://www.encodeproject.org/files/ENCFF471OVB/@@download/ENCFF471OVB.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF736YXX bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF019RWB, ENCFF227IZS, ENCFF353EFN, ENCFF910IKB 7109326 ENCODE Processing Pipeline 6ed19628b6759b0f24de3178832a2252 https://www.encodeproject.org/files/ENCFF736YXX/@@download/ENCFF736YXX.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF772WLM bed narrowPeak conservative idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF367RSU, ENCFF419RSJ, ENCFF471OVB, ENCFF736YXX 151635 ENCODE Processing Pipeline dd1229a236355ba53a00a6d8e27267ce https://www.encodeproject.org/files/ENCFF772WLM/@@download/ENCFF772WLM.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF577LQR bed narrowPeak optimal idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF367RSU, ENCFF419RSJ, ENCFF471OVB, ENCFF736YXX 184702 ENCODE Processing Pipeline bb9c159f53df46172d968d0f6d728c72 https://www.encodeproject.org/files/ENCFF577LQR/@@download/ENCFF577LQR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF921WMN bed narrowPeak optimal idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF050TDD, ENCFF244YZX, ENCFF898ILE 169082 ENCODE Processing Pipeline 20b395a93cc75d57adb1473906fc3ec0 https://www.encodeproject.org/files/ENCFF921WMN/@@download/ENCFF921WMN.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF223MVK bed narrowPeak conservative idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF050TDD, ENCFF244YZX, ENCFF898ILE 123774 ENCODE Processing Pipeline 167b03474eca1be06a0e11484acec536 https://www.encodeproject.org/files/ENCFF223MVK/@@download/ENCFF223MVK.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF537WGM bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF207HQD, ENCFF581ZJL 6921340 ENCODE Processing Pipeline 93a0ffdf4ad41df3b9c58f6d97807eab https://www.encodeproject.org/files/ENCFF537WGM/@@download/ENCFF537WGM.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF551YGS bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF051LWI, ENCFF153FSJ 6917819 ENCODE Processing Pipeline 2cae284037126b33f97ce7c6234a34f6 https://www.encodeproject.org/files/ENCFF551YGS/@@download/ENCFF551YGS.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF621XGF bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF051LWI, ENCFF153FSJ, ENCFF207HQD, ENCFF581ZJL 7237247 ENCODE Processing Pipeline c804f8189ce60593dc50092e9f736670 https://www.encodeproject.org/files/ENCFF621XGF/@@download/ENCFF621XGF.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF593XRH bed narrowPeak conservative idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF537WGM, ENCFF551YGS, ENCFF621XGF 220690 ENCODE Processing Pipeline 7c6cc21b5ee378a78d4235595eaec02a https://www.encodeproject.org/files/ENCFF593XRH/@@download/ENCFF593XRH.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF561USY bed narrowPeak optimal idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF537WGM, ENCFF551YGS, ENCFF621XGF 336516 ENCODE Processing Pipeline 4c12ec35960c97bf65d22a7ac9ebd2cf https://www.encodeproject.org/files/ENCFF561USY/@@download/ENCFF561USY.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF618DRP bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF273NVY, ENCFF910IKB 6888374 ENCODE Processing Pipeline ce8a95ed684139b21139c0b38a0e0f5d https://www.encodeproject.org/files/ENCFF618DRP/@@download/ENCFF618DRP.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF268RZL bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF227IZS, ENCFF555QMG 6813366 ENCODE Processing Pipeline 3a99b4ad6655f1c1b6fa1080fcec3ccf https://www.encodeproject.org/files/ENCFF268RZL/@@download/ENCFF268RZL.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF171VKW bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF227IZS, ENCFF273NVY, ENCFF555QMG, ENCFF910IKB 7233111 ENCODE Processing Pipeline 61140f9234c12a70e60a95d3d141c8a6 https://www.encodeproject.org/files/ENCFF171VKW/@@download/ENCFF171VKW.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF830BRF bed narrowPeak conservative idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF171VKW, ENCFF268RZL, ENCFF419RSJ, ENCFF618DRP 220384 ENCODE Processing Pipeline ed1d44e6a3a5c26d395631b73837c8f9 https://www.encodeproject.org/files/ENCFF830BRF/@@download/ENCFF830BRF.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF189WAO bed narrowPeak optimal idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF171VKW, ENCFF268RZL, ENCFF419RSJ, ENCFF618DRP 338408 ENCODE Processing Pipeline 6068ae7bdb859eb8165ed7690cd60f4d https://www.encodeproject.org/files/ENCFF189WAO/@@download/ENCFF189WAO.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, missing unfiltered alignments ENCFF276SHQ bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF227IZS, ENCFF331BYU, ENCFF809OVE, ENCFF910IKB 7268964 ENCODE Processing Pipeline 9daa06b3eedc42d8482e5902b26b0fe8 https://www.encodeproject.org/files/ENCFF276SHQ/@@download/ENCFF276SHQ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF936EBH bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF809OVE, ENCFF910IKB 7101462 ENCODE Processing Pipeline c2b09a999f58d30b15932fa3c400984e https://www.encodeproject.org/files/ENCFF936EBH/@@download/ENCFF936EBH.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF787GMQ bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF227IZS, ENCFF331BYU 6947125 ENCODE Processing Pipeline cf2058649f114e1a61ff58bfe03c3e57 https://www.encodeproject.org/files/ENCFF787GMQ/@@download/ENCFF787GMQ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF349UTF bed narrowPeak optimal idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF276SHQ, ENCFF419RSJ, ENCFF787GMQ, ENCFF936EBH 901584 ENCODE Processing Pipeline c5363ca9e8b87de50a6c4b50c96790de https://www.encodeproject.org/files/ENCFF349UTF/@@download/ENCFF349UTF.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF805RSY bed narrowPeak conservative idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF276SHQ, ENCFF419RSJ, ENCFF787GMQ, ENCFF936EBH 633216 ENCODE Processing Pipeline fbcbea3d75f1572267fad5a40dfd8b7e https://www.encodeproject.org/files/ENCFF805RSY/@@download/ENCFF805RSY.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO, missing unfiltered alignments, mismatched file status ENCFF063GMG bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF147VCN, ENCFF335IPE, ENCFF852RLW, ENCFF879OQC 6729858 ENCODE Processing Pipeline a9f8443f4492d3091639f0cd7a56157d https://www.encodeproject.org/files/ENCFF063GMG/@@download/ENCFF063GMG.bed.gz hg19 released low read length missing unfiltered alignments ENCFF135VWG bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF852RLW, ENCFF879OQC 5660342 ENCODE Processing Pipeline b7a0aac41ac7f624fc8866dbfd8e2129 https://www.encodeproject.org/files/ENCFF135VWG/@@download/ENCFF135VWG.bed.gz hg19 released low read length missing unfiltered alignments ENCFF770GWM bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF147VCN, ENCFF335IPE 5247189 ENCODE Processing Pipeline ae86b2319905c3bbce4a66fa7affa0a3 https://www.encodeproject.org/files/ENCFF770GWM/@@download/ENCFF770GWM.bed.gz hg19 released low read length missing unfiltered alignments ENCFF344HRG bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF178EJY 5121643 ENCODE Processing Pipeline 208f76b1214d2c8bc120a6addc214a9b https://www.encodeproject.org/files/ENCFF344HRG/@@download/ENCFF344HRG.bed.gz GRCh38 released low read length missing unfiltered alignments ENCFF886EVL bed narrowPeak optimal idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF344HRG, ENCFF419RSJ, ENCFF785QCU, ENCFF934EYD 162552 ENCODE Processing Pipeline d9a2d56a4d106637d515cedb4176fae9 https://www.encodeproject.org/files/ENCFF886EVL/@@download/ENCFF886EVL.bed.gz GRCh38 released low read length missing unfiltered alignments ENCFF785QCU bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF057KBN, ENCFF577FNG 5470469 ENCODE Processing Pipeline f56050b119170957b4278817f4a37ea9 https://www.encodeproject.org/files/ENCFF785QCU/@@download/ENCFF785QCU.bed.gz GRCh38 released low read length missing unfiltered alignments ENCFF934EYD bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF057KBN, ENCFF156FED, ENCFF178EJY, ENCFF577FNG 6596165 ENCODE Processing Pipeline 4426ab492f93716962efe1b69d6e2707 https://www.encodeproject.org/files/ENCFF934EYD/@@download/ENCFF934EYD.bed.gz GRCh38 released low read length missing unfiltered alignments ENCFF403GZC bed narrowPeak conservative idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF344HRG, ENCFF419RSJ, ENCFF785QCU, ENCFF934EYD 117587 ENCODE Processing Pipeline 810a3ceaf02c4b0befba613f5be4f648 https://www.encodeproject.org/files/ENCFF403GZC/@@download/ENCFF403GZC.bed.gz GRCh38 released low read length missing unfiltered alignments ENCFF629ZSD bed narrowPeak conservative idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF063GMG, ENCFF135VWG, ENCFF770GWM 98680 ENCODE Processing Pipeline 8d60e8b213fe10958274f490e0cfe048 https://www.encodeproject.org/files/ENCFF629ZSD/@@download/ENCFF629ZSD.bed.gz hg19 released low read length missing unfiltered alignments ENCFF231TGQ bed narrowPeak optimal idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF063GMG, ENCFF135VWG, ENCFF770GWM 131926 ENCODE Processing Pipeline 18f3a5f97cca0b5c798f4d6623c542f8 https://www.encodeproject.org/files/ENCFF231TGQ/@@download/ENCFF231TGQ.bed.gz hg19 released low read length missing unfiltered alignments ENCFF261OOY bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF880NAD 6789096 ENCODE Processing Pipeline e743490d7df20591f455f87097e4306e https://www.encodeproject.org/files/ENCFF261OOY/@@download/ENCFF261OOY.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF303OST bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF222XNY 6744989 ENCODE Processing Pipeline cdfc6e5c799192f140ca4b3d9f0347cc https://www.encodeproject.org/files/ENCFF303OST/@@download/ENCFF303OST.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF121KKJ bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF222XNY, ENCFF581ZJL, ENCFF880NAD 7245731 ENCODE Processing Pipeline e7a3c665f0be890bf5ebbc1b4c449bcb https://www.encodeproject.org/files/ENCFF121KKJ/@@download/ENCFF121KKJ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF608XIU bed narrowPeak conservative idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF121KKJ, ENCFF261OOY, ENCFF303OST 256896 ENCODE Processing Pipeline f01a481112333050d21fca16938e7d2a https://www.encodeproject.org/files/ENCFF608XIU/@@download/ENCFF608XIU.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF049CRW bed narrowPeak optimal idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF121KKJ, ENCFF261OOY, ENCFF303OST 364868 ENCODE Processing Pipeline 365d731ad998698c1878c914037ef74d https://www.encodeproject.org/files/ENCFF049CRW/@@download/ENCFF049CRW.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF227UBK bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF079SPF, ENCFF910IKB 6726204 ENCODE Processing Pipeline bee76617ba767b38019fbc121fb22151 https://www.encodeproject.org/files/ENCFF227UBK/@@download/ENCFF227UBK.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF382EKG bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF738QLQ 6620263 ENCODE Processing Pipeline bbad40f9dd3e8612040226f035b26b81 https://www.encodeproject.org/files/ENCFF382EKG/@@download/ENCFF382EKG.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF720KEL bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF079SPF, ENCFF227IZS, ENCFF738QLQ, ENCFF910IKB 7236012 ENCODE Processing Pipeline f2c77749ceb2dd4cc3bd3c65d944c878 https://www.encodeproject.org/files/ENCFF720KEL/@@download/ENCFF720KEL.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF950TOJ bed narrowPeak optimal idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF227UBK, ENCFF382EKG, ENCFF419RSJ, ENCFF720KEL 369995 ENCODE Processing Pipeline 10336ca13796bd6de0efef8d3ed56c0e https://www.encodeproject.org/files/ENCFF950TOJ/@@download/ENCFF950TOJ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF857AXB bed narrowPeak conservative idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF227UBK, ENCFF382EKG, ENCFF419RSJ, ENCFF720KEL 258667 ENCODE Processing Pipeline 230ff7a71ccd06daa57122123d4550da https://www.encodeproject.org/files/ENCFF857AXB/@@download/ENCFF857AXB.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF872ZMD bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF446HGS, ENCFF712WXB, ENCFF790TAN 7161215 ENCODE Processing Pipeline 0e9e09fc2fe699e1c31bf0dd3a4a2c8e https://www.encodeproject.org/files/ENCFF872ZMD/@@download/ENCFF872ZMD.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF012TVZ bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF406TJQ, ENCFF712WXB 7200828 ENCODE Processing Pipeline cbecef0e703aa5497d0e507973135a09 https://www.encodeproject.org/files/ENCFF012TVZ/@@download/ENCFF012TVZ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF407JUL bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF406TJQ, ENCFF446HGS, ENCFF712WXB, ENCFF790TAN 7248526 ENCODE Processing Pipeline 1b0316c1c1940b47ce742b0b79ad169e https://www.encodeproject.org/files/ENCFF407JUL/@@download/ENCFF407JUL.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF302XKF bed narrowPeak conservative idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF012TVZ, ENCFF407JUL, ENCFF419RSJ, ENCFF872ZMD 50610 ENCODE Processing Pipeline 14be49dfdf070fa86b17f0863c49db08 https://www.encodeproject.org/files/ENCFF302XKF/@@download/ENCFF302XKF.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF354UUL bed narrowPeak optimal idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF012TVZ, ENCFF407JUL, ENCFF419RSJ, ENCFF872ZMD 88032 ENCODE Processing Pipeline a01682d2085868345e98e93637c59466 https://www.encodeproject.org/files/ENCFF354UUL/@@download/ENCFF354UUL.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF119HTJ bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF713FNS, ENCFF834TUP 7158688 ENCODE Processing Pipeline 75295dfe55f5bd4bfd290e17652e20fa https://www.encodeproject.org/files/ENCFF119HTJ/@@download/ENCFF119HTJ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF613QHY bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF160VXC, ENCFF713FNS, ENCFF834TUP, ENCFF894UKH 7243838 ENCODE Processing Pipeline 16ac8d3b1027ce9f4715e9cb34efd8ad https://www.encodeproject.org/files/ENCFF613QHY/@@download/ENCFF613QHY.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF196BYO bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF834TUP, ENCFF894UKH 7190905 ENCODE Processing Pipeline 384d7721ceedfc6c87bc7fdbba81a592 https://www.encodeproject.org/files/ENCFF196BYO/@@download/ENCFF196BYO.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF610KUB bed narrowPeak conservative idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF119HTJ, ENCFF196BYO, ENCFF613QHY 50532 ENCODE Processing Pipeline 4ee902c1263a19cf31eca4ff4a23e403 https://www.encodeproject.org/files/ENCFF610KUB/@@download/ENCFF610KUB.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF294VWT bed narrowPeak optimal idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF119HTJ, ENCFF196BYO, ENCFF613QHY 95376 ENCODE Processing Pipeline a6f8dcd67064d010c2255be4e069cee1 https://www.encodeproject.org/files/ENCFF294VWT/@@download/ENCFF294VWT.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF041EID bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF335IPE, ENCFF708LOC 3776183 ENCODE Processing Pipeline fef6dda7aa2bb57a75863df1649746b9 https://www.encodeproject.org/files/ENCFF041EID/@@download/ENCFF041EID.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF248AZH bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF621GUP, ENCFF879OQC 4746442 ENCODE Processing Pipeline 920cb17166e327ea21f13d89051b2cd1 https://www.encodeproject.org/files/ENCFF248AZH/@@download/ENCFF248AZH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF133TIH bed narrowPeak conservative idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF041EID, ENCFF248AZH, ENCFF469ORR 12028 ENCODE Processing Pipeline 15e62804318fd046a39e2b6f1070160a https://www.encodeproject.org/files/ENCFF133TIH/@@download/ENCFF133TIH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF597DIY bed narrowPeak optimal idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF041EID, ENCFF248AZH, ENCFF469ORR 20168 ENCODE Processing Pipeline 23fbea40b5d67edb1d62e497fbf80945 https://www.encodeproject.org/files/ENCFF597DIY/@@download/ENCFF597DIY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF469ORR bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF335IPE, ENCFF621GUP, ENCFF708LOC, ENCFF879OQC 5411942 ENCODE Processing Pipeline 475b1cc58fd630bdb84cb1586163e4a7 https://www.encodeproject.org/files/ENCFF469ORR/@@download/ENCFF469ORR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF941TIL bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF417HNM 3653464 ENCODE Processing Pipeline 6770de3c57d497643b8af49cb3c3cdf5 https://www.encodeproject.org/files/ENCFF941TIL/@@download/ENCFF941TIL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF404UQP bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF384WCY 4530743 ENCODE Processing Pipeline 64ab67e5c3dbc0c3f576f2ecb615aa36 https://www.encodeproject.org/files/ENCFF404UQP/@@download/ENCFF404UQP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF055TID bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF384WCY, ENCFF417HNM 5155110 ENCODE Processing Pipeline 77dfe32ba31c0492e569913b23d714bb https://www.encodeproject.org/files/ENCFF055TID/@@download/ENCFF055TID.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF953ZSO bed narrowPeak conservative idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF055TID, ENCFF404UQP, ENCFF419RSJ, ENCFF941TIL 12401 ENCODE Processing Pipeline 37ac6d6b1b1ffaae569fc32783c9e2ce https://www.encodeproject.org/files/ENCFF953ZSO/@@download/ENCFF953ZSO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF526PMI bed narrowPeak optimal idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF055TID, ENCFF404UQP, ENCFF419RSJ, ENCFF941TIL 21193 ENCODE Processing Pipeline 69fd6d6fa35b80f8d160e562391c7d70 https://www.encodeproject.org/files/ENCFF526PMI/@@download/ENCFF526PMI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF530GIY bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF767FRB 6777709 ENCODE Processing Pipeline e2874ffe928f5e3b2b2158e2d9ac76dc https://www.encodeproject.org/files/ENCFF530GIY/@@download/ENCFF530GIY.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF950ILH bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF910IKB, ENCFF911BGV 6946386 ENCODE Processing Pipeline 8483d127513c4118063faf467a9fbb82 https://www.encodeproject.org/files/ENCFF950ILH/@@download/ENCFF950ILH.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF459DYU bed narrowPeak optimal idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF521EAO, ENCFF530GIY, ENCFF950ILH 576447 ENCODE Processing Pipeline 624fb737709c3ddaa02467eac3bc9eba https://www.encodeproject.org/files/ENCFF459DYU/@@download/ENCFF459DYU.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF521EAO bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF767FRB, ENCFF910IKB, ENCFF911BGV 7247401 ENCODE Processing Pipeline a2291ca818def310256efcbd7aa7333f https://www.encodeproject.org/files/ENCFF521EAO/@@download/ENCFF521EAO.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF119EPK bed narrowPeak conservative idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF521EAO, ENCFF530GIY, ENCFF950ILH 480583 ENCODE Processing Pipeline 2cb97f1ef2af870da2442d5764851277 https://www.encodeproject.org/files/ENCFF119EPK/@@download/ENCFF119EPK.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF799NMK bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF750PMI 6794130 ENCODE Processing Pipeline dc1143c5fb672ca9b5a0bf818538506d https://www.encodeproject.org/files/ENCFF799NMK/@@download/ENCFF799NMK.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF228QNJ bed narrowPeak conservative idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF595GHN, ENCFF799NMK, ENCFF846YPA 450613 ENCODE Processing Pipeline cf77539f2a46edb31c4d4c3bc64756e7 https://www.encodeproject.org/files/ENCFF228QNJ/@@download/ENCFF228QNJ.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF595GHN bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF510XHR, ENCFF581ZJL, ENCFF750PMI 7151498 ENCODE Processing Pipeline e099eb679c86628154d85fb234b9c010 https://www.encodeproject.org/files/ENCFF595GHN/@@download/ENCFF595GHN.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF846YPA bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF510XHR, ENCFF581ZJL 6969714 ENCODE Processing Pipeline 62e5ebddd24974b5d6e8e6dbb6cc0480 https://www.encodeproject.org/files/ENCFF846YPA/@@download/ENCFF846YPA.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF567GSX bed narrowPeak optimal idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF595GHN, ENCFF799NMK, ENCFF846YPA 542551 ENCODE Processing Pipeline dade819d689c4ea2e878e83004ee4f3b https://www.encodeproject.org/files/ENCFF567GSX/@@download/ENCFF567GSX.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF001VNG bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 408221 Michael Snyder, Stanford 24c2a5ba894e0cc0c6527157d5a9d17e https://www.encodeproject.org/files/ENCFF001VNG/@@download/ENCFF001VNG.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF002CWS bed narrowPeak optimal idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 95959 ENCODE Consortium Analysis Working Group 3258cc485e176b5d51866301f5e00016 https://www.encodeproject.org/files/ENCFF002CWS/@@download/ENCFF002CWS.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF392JBV bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF215TDO 4803335 ENCODE Processing Pipeline e891117a4f0d2ce918017f7d7a9012ea https://www.encodeproject.org/files/ENCFF392JBV/@@download/ENCFF392JBV.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF718UFW bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF040MZK 4660940 ENCODE Processing Pipeline 1a9d561713b44a41317872fad7b08e1b https://www.encodeproject.org/files/ENCFF718UFW/@@download/ENCFF718UFW.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF145AYG bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF040MZK, ENCFF215TDO 5614865 ENCODE Processing Pipeline e04d5a715e6631ebc52fdcfb1cd924df https://www.encodeproject.org/files/ENCFF145AYG/@@download/ENCFF145AYG.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF115DVM bed narrowPeak conservative idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF145AYG, ENCFF392JBV, ENCFF419RSJ, ENCFF718UFW 92303 ENCODE Processing Pipeline b0d6b3ddfaa8c7712061d7f3ea595c6e https://www.encodeproject.org/files/ENCFF115DVM/@@download/ENCFF115DVM.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF478HYJ bed narrowPeak optimal idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF145AYG, ENCFF392JBV, ENCFF419RSJ, ENCFF718UFW 100269 ENCODE Processing Pipeline 853e928757ef6c6998959eb6e2068ef3 https://www.encodeproject.org/files/ENCFF478HYJ/@@download/ENCFF478HYJ.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF483NEI bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF361VCB, ENCFF581ZJL 6513282 ENCODE Processing Pipeline c770544017dc29caa52a24fae3ce7366 https://www.encodeproject.org/files/ENCFF483NEI/@@download/ENCFF483NEI.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF118YQO bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF889BVE 6858994 ENCODE Processing Pipeline 7763099fa0d7ef87e37db04101e1b836 https://www.encodeproject.org/files/ENCFF118YQO/@@download/ENCFF118YQO.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF496FNH bed narrowPeak conservative idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF118YQO, ENCFF483NEI, ENCFF788QDP 232861 ENCODE Processing Pipeline f2edbc5020a623c3ea937596f67b847d https://www.encodeproject.org/files/ENCFF496FNH/@@download/ENCFF496FNH.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF253NXR bed narrowPeak optimal idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF118YQO, ENCFF483NEI, ENCFF788QDP 323129 ENCODE Processing Pipeline ce16e91b56c848b604565d6e0c378f09 https://www.encodeproject.org/files/ENCFF253NXR/@@download/ENCFF253NXR.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF788QDP bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF361VCB, ENCFF581ZJL, ENCFF889BVE 7227272 ENCODE Processing Pipeline 03a6c1c79824a0d64677b31384f15103 https://www.encodeproject.org/files/ENCFF788QDP/@@download/ENCFF788QDP.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF547YAA bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF122RSM, ENCFF910IKB 6375691 ENCODE Processing Pipeline 23e09b5d55164430a3beff2f17bfc46e https://www.encodeproject.org/files/ENCFF547YAA/@@download/ENCFF547YAA.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF155JOD bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF450TNG 6758053 ENCODE Processing Pipeline ff4074cf18755b7000d86ad7e6249d41 https://www.encodeproject.org/files/ENCFF155JOD/@@download/ENCFF155JOD.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF804CZV bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF122RSM, ENCFF227IZS, ENCFF450TNG, ENCFF910IKB 7204235 ENCODE Processing Pipeline 24799fff7c9436bae5bbe8b2d828cc26 https://www.encodeproject.org/files/ENCFF804CZV/@@download/ENCFF804CZV.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF148GRM bed narrowPeak conservative idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF155JOD, ENCFF419RSJ, ENCFF547YAA, ENCFF804CZV 233795 ENCODE Processing Pipeline 1dcb125f70b6baadb1ccedb1f0895941 https://www.encodeproject.org/files/ENCFF148GRM/@@download/ENCFF148GRM.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF908ZLN bed narrowPeak optimal idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF155JOD, ENCFF419RSJ, ENCFF547YAA, ENCFF804CZV 325836 ENCODE Processing Pipeline 2613b9d76c067f199852593f8ae62cfb https://www.encodeproject.org/files/ENCFF908ZLN/@@download/ENCFF908ZLN.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF593QQM bed narrowPeak peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 2 ENCFF618GRR, ENCFF712WXB 6958991 ENCODE Processing Pipeline 7e85507f8aa826793cafa28f654592d8 https://www.encodeproject.org/files/ENCFF593QQM/@@download/ENCFF593QQM.bed.gz GRCh38 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF919NGD bed narrowPeak peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF988ZHP 7242984 ENCODE Processing Pipeline 3e56b9307c0df40425c7e12d3e8f9002 https://www.encodeproject.org/files/ENCFF919NGD/@@download/ENCFF919NGD.bed.gz GRCh38 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF357DBY bed narrowPeak peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 1, 2 ENCFF618GRR, ENCFF712WXB, ENCFF790TAN, ENCFF988ZHP 7296272 ENCODE Processing Pipeline f1f43475015aba4f261f7a4db5920591 https://www.encodeproject.org/files/ENCFF357DBY/@@download/ENCFF357DBY.bed.gz GRCh38 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF126GSZ bed narrowPeak conservative idr thresholded peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 1, 2 ENCFF357DBY, ENCFF419RSJ, ENCFF593QQM, ENCFF919NGD 299196 ENCODE Processing Pipeline 8d9a0fa1e92d9986a1c7e3cbb949a941 https://www.encodeproject.org/files/ENCFF126GSZ/@@download/ENCFF126GSZ.bed.gz GRCh38 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF014WCO bed narrowPeak optimal idr thresholded peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 1, 2 ENCFF357DBY, ENCFF419RSJ, ENCFF593QQM, ENCFF919NGD 367070 ENCODE Processing Pipeline 30c53fc81c2d34d48759c316c8986dd4 https://www.encodeproject.org/files/ENCFF014WCO/@@download/ENCFF014WCO.bed.gz GRCh38 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF092RVY bed narrowPeak peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 2 ENCFF011FXS, ENCFF834TUP 6970189 ENCODE Processing Pipeline b5e8398f7eb51ee7056ba42b7c6db79f https://www.encodeproject.org/files/ENCFF092RVY/@@download/ENCFF092RVY.bed.gz hg19 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF419UUM bed narrowPeak peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF409LFN, ENCFF834TUP 7253431 ENCODE Processing Pipeline 0c8f8e327188aa4fa5280a5bccb00cc4 https://www.encodeproject.org/files/ENCFF419UUM/@@download/ENCFF419UUM.bed.gz hg19 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF956NGK bed narrowPeak peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 1, 2 ENCFF011FXS, ENCFF160VXC, ENCFF409LFN, ENCFF834TUP 7291648 ENCODE Processing Pipeline 5a857217c2c516a84b9cc42e70fd2118 https://www.encodeproject.org/files/ENCFF956NGK/@@download/ENCFF956NGK.bed.gz hg19 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF544ACA bed narrowPeak conservative idr thresholded peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF092RVY, ENCFF419UUM, ENCFF956NGK 299297 ENCODE Processing Pipeline 03a249688e84868e91279fa0b994b836 https://www.encodeproject.org/files/ENCFF544ACA/@@download/ENCFF544ACA.bed.gz hg19 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF262BVP bed narrowPeak optimal idr thresholded peaks ENCSR213HBY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TOE1-human ENCAB755SML DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF092RVY, ENCFF419UUM, ENCFF956NGK 363499 ENCODE Processing Pipeline 2cc3acce54994851432f7de7dce20f80 https://www.encodeproject.org/files/ENCFF262BVP/@@download/ENCFF262BVP.bed.gz hg19 released antibody characterized with exemption, moderate library complexity, mild to moderate bottlenecking ENCFF001VPK bed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 609225 Michael Snyder, Stanford f3c6590064e9f00e2d27030c95559992 https://www.encodeproject.org/files/ENCFF001VPK/@@download/ENCFF001VPK.bed.gz hg19 archived low read depth, low read length missing derived_from, mismatched file status, biological replicates with identical biosample ENCFF044BDY bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF532BVM 6471115 ENCODE Processing Pipeline 3caabdf7296c8f602cc28ed8af78873f https://www.encodeproject.org/files/ENCFF044BDY/@@download/ENCFF044BDY.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF304BDR bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF283SLJ 6607409 ENCODE Processing Pipeline 29a97c01d23a2cfd53c3cb12a42e343e https://www.encodeproject.org/files/ENCFF304BDR/@@download/ENCFF304BDR.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF952JIK bed narrowPeak optimal idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF044BDY, ENCFF223ZVT, ENCFF304BDR, ENCFF419RSJ 294522 ENCODE Processing Pipeline 52ed0332d740140a177782f40e0872bc https://www.encodeproject.org/files/ENCFF952JIK/@@download/ENCFF952JIK.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF223ZVT bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF283SLJ, ENCFF532BVM 7193691 ENCODE Processing Pipeline 0f12f6f00f46c3eaa03f0faacb533b8f https://www.encodeproject.org/files/ENCFF223ZVT/@@download/ENCFF223ZVT.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF883AYB bed narrowPeak conservative idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF044BDY, ENCFF223ZVT, ENCFF304BDR, ENCFF419RSJ 196231 ENCODE Processing Pipeline 2566c03c3201c8842a55f9491c3171de https://www.encodeproject.org/files/ENCFF883AYB/@@download/ENCFF883AYB.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF627NVL bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF652SID 6612322 ENCODE Processing Pipeline c94f36c4657842187a9a2e757738c0f2 https://www.encodeproject.org/files/ENCFF627NVL/@@download/ENCFF627NVL.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF242IWJ bed narrowPeak optimal idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF436EEZ, ENCFF627NVL, ENCFF777QKF 294099 ENCODE Processing Pipeline a3a1e5f8f633db2836973205f624314e https://www.encodeproject.org/files/ENCFF242IWJ/@@download/ENCFF242IWJ.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF436EEZ bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF702MHE 6757441 ENCODE Processing Pipeline 43e8a65d9d33f9e5bf8e0dfaccc72e29 https://www.encodeproject.org/files/ENCFF436EEZ/@@download/ENCFF436EEZ.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF777QKF bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF652SID, ENCFF702MHE 7214303 ENCODE Processing Pipeline 38df1b0cb28d70f686b34b3b8802e292 https://www.encodeproject.org/files/ENCFF777QKF/@@download/ENCFF777QKF.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF766PSK bed narrowPeak conservative idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF436EEZ, ENCFF627NVL, ENCFF777QKF 198181 ENCODE Processing Pipeline 40eeca92928cbaa227f538cca2e80ea9 https://www.encodeproject.org/files/ENCFF766PSK/@@download/ENCFF766PSK.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF031VXJ bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF272DYC, ENCFF712WXB, ENCFF790TAN 7263292 ENCODE Processing Pipeline d1bdc5d490ce703dfa9de0a157634557 https://www.encodeproject.org/files/ENCFF031VXJ/@@download/ENCFF031VXJ.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF654XFG bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF059AYM, ENCFF272DYC, ENCFF712WXB, ENCFF790TAN 7305530 ENCODE Processing Pipeline 24169255eb1bd2e283828e56dbde1ad2 https://www.encodeproject.org/files/ENCFF654XFG/@@download/ENCFF654XFG.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF981FUV bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF059AYM, ENCFF712WXB 7228242 ENCODE Processing Pipeline ed52d70ebbde88f412f5b8f450323df3 https://www.encodeproject.org/files/ENCFF981FUV/@@download/ENCFF981FUV.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF092TVM bed narrowPeak optimal idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF031VXJ, ENCFF419RSJ, ENCFF654XFG, ENCFF981FUV 878508 ENCODE Processing Pipeline 755fcf39e0513f266110edb9abe198a7 https://www.encodeproject.org/files/ENCFF092TVM/@@download/ENCFF092TVM.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF132TXF bed narrowPeak conservative idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF031VXJ, ENCFF419RSJ, ENCFF654XFG, ENCFF981FUV 859248 ENCODE Processing Pipeline 358dace8ca2c640240859ceca2c46c93 https://www.encodeproject.org/files/ENCFF132TXF/@@download/ENCFF132TXF.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF292SNP bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF753LGT, ENCFF834TUP 7252193 ENCODE Processing Pipeline e75f3e53f1fb259d8bc04167166d255b https://www.encodeproject.org/files/ENCFF292SNP/@@download/ENCFF292SNP.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF072WWL bed narrowPeak conservative idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF292SNP, ENCFF351DKB, ENCFF754CMK 855707 ENCODE Processing Pipeline 5e181fde622ec273b1a5685c383e368e https://www.encodeproject.org/files/ENCFF072WWL/@@download/ENCFF072WWL.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF351DKB bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF160VXC, ENCFF822VWX, ENCFF834TUP 7258939 ENCODE Processing Pipeline 96bc24b8a37c141356d2d757d60d26ec https://www.encodeproject.org/files/ENCFF351DKB/@@download/ENCFF351DKB.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF370ENX bed narrowPeak optimal idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF292SNP, ENCFF351DKB, ENCFF754CMK 878417 ENCODE Processing Pipeline c5c8948cb0e3434da4fa620f09ef9812 https://www.encodeproject.org/files/ENCFF370ENX/@@download/ENCFF370ENX.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF754CMK bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF160VXC, ENCFF753LGT, ENCFF822VWX, ENCFF834TUP 7301117 ENCODE Processing Pipeline 6f2bd3fb9c8d0f1fe300daa205cb1e3f https://www.encodeproject.org/files/ENCFF754CMK/@@download/ENCFF754CMK.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO ENCFF131ZOO bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF045NGS, ENCFF581ZJL 7152432 ENCODE Processing Pipeline 022b59d0cfcc0164573c320d5b12e414 https://www.encodeproject.org/files/ENCFF131ZOO/@@download/ENCFF131ZOO.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF716AIG bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF349GIB 7115295 ENCODE Processing Pipeline e9e72796ae9f43e88c1043dfb722ab1f https://www.encodeproject.org/files/ENCFF716AIG/@@download/ENCFF716AIG.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF877PNB bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF045NGS, ENCFF051LWI, ENCFF349GIB, ENCFF581ZJL 7258123 ENCODE Processing Pipeline 3b3b1152258dd1fb93fc01cea2dc3b3f https://www.encodeproject.org/files/ENCFF877PNB/@@download/ENCFF877PNB.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF577RMM bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF109OWW 7091293 ENCODE Processing Pipeline dc741022ab20d810ebe9b7d004aa9d47 https://www.encodeproject.org/files/ENCFF577RMM/@@download/ENCFF577RMM.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF420TBJ bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF205VDU 7063665 ENCODE Processing Pipeline b2827728db30e54b6aa62dff650655ba https://www.encodeproject.org/files/ENCFF420TBJ/@@download/ENCFF420TBJ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF600USA bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF109OWW, ENCFF205VDU 7226046 ENCODE Processing Pipeline ab5c33b904cbeb9e957f8d1a0d50e473 https://www.encodeproject.org/files/ENCFF600USA/@@download/ENCFF600USA.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF394AJV bed narrowPeak conservative idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF420TBJ, ENCFF577RMM, ENCFF600USA 443437 ENCODE Processing Pipeline 21c603fc21897479d75361f2740eceef https://www.encodeproject.org/files/ENCFF394AJV/@@download/ENCFF394AJV.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF007EEV bed narrowPeak optimal idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF420TBJ, ENCFF577RMM, ENCFF600USA 489096 ENCODE Processing Pipeline d9037895850efa7df09bc263f8c6c129 https://www.encodeproject.org/files/ENCFF007EEV/@@download/ENCFF007EEV.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF015AWN bed narrowPeak conservative idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF131ZOO, ENCFF716AIG, ENCFF877PNB 372398 ENCODE Processing Pipeline ce33b81aff22f0d83233fef0a6edaa58 https://www.encodeproject.org/files/ENCFF015AWN/@@download/ENCFF015AWN.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF973LDQ bed narrowPeak optimal idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF131ZOO, ENCFF716AIG, ENCFF877PNB 405803 ENCODE Processing Pipeline 5aced2d7e389eb5908524ecfd6ae9e02 https://www.encodeproject.org/files/ENCFF973LDQ/@@download/ENCFF973LDQ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF699WES bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541UXW 6803821 ENCODE Processing Pipeline 30f8a9e2d5f84d79f7c8112a89120a22 https://www.encodeproject.org/files/ENCFF699WES/@@download/ENCFF699WES.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF459WKK bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541UXW, ENCFF545HSY, ENCFF581ZJL 7190556 ENCODE Processing Pipeline 7c3e23942b93b36f294f4ea77bdfe10c https://www.encodeproject.org/files/ENCFF459WKK/@@download/ENCFF459WKK.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF422VXS bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF545HSY, ENCFF581ZJL 6568266 ENCODE Processing Pipeline ec5244eb4f12cadf3aca61e411e7ab61 https://www.encodeproject.org/files/ENCFF422VXS/@@download/ENCFF422VXS.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF442GMI bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF758LME 6682964 ENCODE Processing Pipeline 227aebf171c61609e000a54338069d5d https://www.encodeproject.org/files/ENCFF442GMI/@@download/ENCFF442GMI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF440HZQ bed narrowPeak conservative idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF442GMI, ENCFF482RLB, ENCFF621FNG 229367 ENCODE Processing Pipeline 88c1b7ca7f379fff5cdb27b438c4cf05 https://www.encodeproject.org/files/ENCFF440HZQ/@@download/ENCFF440HZQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF452LDK bed narrowPeak optimal idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF442GMI, ENCFF482RLB, ENCFF621FNG 269540 ENCODE Processing Pipeline c9f1fe671a19405e9d00c16311861993 https://www.encodeproject.org/files/ENCFF452LDK/@@download/ENCFF452LDK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF482RLB bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF487SUP, ENCFF910IKB 6431546 ENCODE Processing Pipeline e71fb4987f4c809fd1ed0afd87f19fea https://www.encodeproject.org/files/ENCFF482RLB/@@download/ENCFF482RLB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF621FNG bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF487SUP, ENCFF758LME, ENCFF910IKB 7190972 ENCODE Processing Pipeline 74603f2eaa3a7de6d1b8dd547908efc4 https://www.encodeproject.org/files/ENCFF621FNG/@@download/ENCFF621FNG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF321TMN bed narrowPeak conservative idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF422VXS, ENCFF459WKK, ENCFF699WES 193656 ENCODE Processing Pipeline 7a44b6ab7a431e0d5f11a87d001d19ef https://www.encodeproject.org/files/ENCFF321TMN/@@download/ENCFF321TMN.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF058NMZ bed narrowPeak optimal idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF422VXS, ENCFF459WKK, ENCFF699WES 223612 ENCODE Processing Pipeline 573eb94247a08300f7c022e4b16aeff5 https://www.encodeproject.org/files/ENCFF058NMZ/@@download/ENCFF058NMZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF579YKA bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF856TBD, ENCFF910IKB 7161401 ENCODE Processing Pipeline a60372d54cb372c01713f0b394c2a9bf https://www.encodeproject.org/files/ENCFF579YKA/@@download/ENCFF579YKA.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF019FWB bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF227IZS, ENCFF799FNR 7104401 ENCODE Processing Pipeline 69a5dbdc97d345ebba1768aa6b5c8c66 https://www.encodeproject.org/files/ENCFF019FWB/@@download/ENCFF019FWB.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF458SHG bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF227IZS, ENCFF799FNR, ENCFF856TBD, ENCFF910IKB 7196613 ENCODE Processing Pipeline a38c8e65f2b5a2e84a025a362b85c425 https://www.encodeproject.org/files/ENCFF458SHG/@@download/ENCFF458SHG.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF445RNG bed narrowPeak conservative idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF019FWB, ENCFF419RSJ, ENCFF458SHG, ENCFF579YKA 830188 ENCODE Processing Pipeline 13837091c6a6564bf9bd71dc2c3b0d6d https://www.encodeproject.org/files/ENCFF445RNG/@@download/ENCFF445RNG.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF423LPW bed narrowPeak optimal idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF019FWB, ENCFF419RSJ, ENCFF458SHG, ENCFF579YKA 963003 ENCODE Processing Pipeline 4b1841acd8c1d519ba0db7a6c19e4987 https://www.encodeproject.org/files/ENCFF423LPW/@@download/ENCFF423LPW.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF026BYE bed narrowPeak conservative idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF471MPD, ENCFF706LNT, ENCFF875ISD 870467 ENCODE Processing Pipeline 3ec57cb9f9f1f3c024d9dbc233cf391a https://www.encodeproject.org/files/ENCFF026BYE/@@download/ENCFF026BYE.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF471MPD bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF011MCR, ENCFF581ZJL 7133917 ENCODE Processing Pipeline eac7607be827468e48cf0c599196747a https://www.encodeproject.org/files/ENCFF471MPD/@@download/ENCFF471MPD.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF706LNT bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF051LWI, ENCFF767TZS 7049612 ENCODE Processing Pipeline ff995f9cd1c55eec79946c18067b474a https://www.encodeproject.org/files/ENCFF706LNT/@@download/ENCFF706LNT.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF875ISD bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF011MCR, ENCFF051LWI, ENCFF581ZJL, ENCFF767TZS 7320798 ENCODE Processing Pipeline 87a62b0c6b3efe0893fb3b22d77a4ae4 https://www.encodeproject.org/files/ENCFF875ISD/@@download/ENCFF875ISD.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF314ULQ bed narrowPeak optimal idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF471MPD, ENCFF706LNT, ENCFF875ISD 1006532 ENCODE Processing Pipeline 807407007c047f1cd624d59e5aff4373 https://www.encodeproject.org/files/ENCFF314ULQ/@@download/ENCFF314ULQ.bed.gz hg19 released moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF958LLL bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF469DEJ, ENCFF581ZJL 6673322 ENCODE Processing Pipeline 975a07ecd07b60af1afa02f8d730bce8 https://www.encodeproject.org/files/ENCFF958LLL/@@download/ENCFF958LLL.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF904JFG bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF745TZN 6852614 ENCODE Processing Pipeline 500d04a0c0adb72a12ce4c535498d6d5 https://www.encodeproject.org/files/ENCFF904JFG/@@download/ENCFF904JFG.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF997JHM bed narrowPeak conservative idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF904JFG, ENCFF940ADN, ENCFF958LLL 23618 ENCODE Processing Pipeline ba64babb2e03f2acfa71ad96315d06f5 https://www.encodeproject.org/files/ENCFF997JHM/@@download/ENCFF997JHM.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF940ADN bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF469DEJ, ENCFF581ZJL, ENCFF745TZN 7229913 ENCODE Processing Pipeline 7d69edafb10a4b1d2e93dfe0429cfdff https://www.encodeproject.org/files/ENCFF940ADN/@@download/ENCFF940ADN.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF034PQD bed narrowPeak optimal idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF904JFG, ENCFF940ADN, ENCFF958LLL 70153 ENCODE Processing Pipeline 79eeb002c4537a9f9bcd3ee531b71688 https://www.encodeproject.org/files/ENCFF034PQD/@@download/ENCFF034PQD.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF823TIB bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF573OTF, ENCFF910IKB 6544776 ENCODE Processing Pipeline d1055dad7904b3f75fc7d662f6fb4de7 https://www.encodeproject.org/files/ENCFF823TIB/@@download/ENCFF823TIB.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF997WEM bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF378UVV 6752341 ENCODE Processing Pipeline a5294f45391169efc94cd59885e60849 https://www.encodeproject.org/files/ENCFF997WEM/@@download/ENCFF997WEM.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF129ADK bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF227IZS, ENCFF378UVV, ENCFF573OTF, ENCFF910IKB 7216775 ENCODE Processing Pipeline 9598eed5ee7b6fe4ee2dacfaff9e0e3b https://www.encodeproject.org/files/ENCFF129ADK/@@download/ENCFF129ADK.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF505HOV bed narrowPeak conservative idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF129ADK, ENCFF419RSJ, ENCFF823TIB, ENCFF997WEM 22760 ENCODE Processing Pipeline 2f9670056522d97050504be2a0ce6996 https://www.encodeproject.org/files/ENCFF505HOV/@@download/ENCFF505HOV.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF549TVW bed narrowPeak optimal idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF129ADK, ENCFF419RSJ, ENCFF823TIB, ENCFF997WEM 69618 ENCODE Processing Pipeline fbd5755d528bd1922c7187aa896ed42c https://www.encodeproject.org/files/ENCFF549TVW/@@download/ENCFF549TVW.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF032INA bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF785NOU, ENCFF790TAN 6423005 ENCODE Processing Pipeline 3be5b6a9b5c3953f496271f2c3ac9e49 https://www.encodeproject.org/files/ENCFF032INA/@@download/ENCFF032INA.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF596JMC bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF135YTU, ENCFF712WXB, ENCFF790TAN 7084324 ENCODE Processing Pipeline 0f978650c7475d3f4c6c470f4f1773dd https://www.encodeproject.org/files/ENCFF596JMC/@@download/ENCFF596JMC.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF661VOO bed narrowPeak optimal idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF032INA, ENCFF332REP, ENCFF419RSJ, ENCFF596JMC 76135 ENCODE Processing Pipeline 61e24bc3f8f4c822d14ccef71fd89050 https://www.encodeproject.org/files/ENCFF661VOO/@@download/ENCFF661VOO.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF332REP bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF135YTU, ENCFF712WXB, ENCFF785NOU, ENCFF790TAN 7354774 ENCODE Processing Pipeline 55cb93dbcf3e06a750c032be09dcb72a https://www.encodeproject.org/files/ENCFF332REP/@@download/ENCFF332REP.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF237ZFZ bed narrowPeak conservative idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF032INA, ENCFF332REP, ENCFF419RSJ, ENCFF596JMC 38592 ENCODE Processing Pipeline 01ab19ed6bbfddf189ed76a639aa30d0 https://www.encodeproject.org/files/ENCFF237ZFZ/@@download/ENCFF237ZFZ.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF079BZJ bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF160VXC, ENCFF769UEW 6419314 ENCODE Processing Pipeline d380eda55ddb0be8f68ad0ee2bddd97f https://www.encodeproject.org/files/ENCFF079BZJ/@@download/ENCFF079BZJ.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF536DPF bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF080BSG, ENCFF160VXC, ENCFF769UEW, ENCFF834TUP 7344565 ENCODE Processing Pipeline 78fb4efce1a828c27cd255cc587deb66 https://www.encodeproject.org/files/ENCFF536DPF/@@download/ENCFF536DPF.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF605KFA bed narrowPeak optimal idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF001TDO, ENCFF079BZJ, ENCFF536DPF, ENCFF849NGF 74757 ENCODE Processing Pipeline 63f4f243cb229ebb48b19b79389deedf https://www.encodeproject.org/files/ENCFF605KFA/@@download/ENCFF605KFA.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF849NGF bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF080BSG, ENCFF160VXC, ENCFF834TUP 7073903 ENCODE Processing Pipeline c95f638a38ecf23b1d2c16768da90c41 https://www.encodeproject.org/files/ENCFF849NGF/@@download/ENCFF849NGF.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF652JEE bed narrowPeak conservative idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF001TDO, ENCFF079BZJ, ENCFF536DPF, ENCFF849NGF 37938 ENCODE Processing Pipeline 03d8238d498037952031823de3466b03 https://www.encodeproject.org/files/ENCFF652JEE/@@download/ENCFF652JEE.bed.gz hg19 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking ENCFF165OLG bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF561GSY, ENCFF581ZJL 7194804 ENCODE Processing Pipeline 3ee7173d67a0ae3c64c577669ba2e544 https://www.encodeproject.org/files/ENCFF165OLG/@@download/ENCFF165OLG.bed.gz hg19 released missing unfiltered alignments ENCFF320JKZ bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF051LWI, ENCFF777WTJ 7163528 ENCODE Processing Pipeline abde4ca054c2bc93c58be11b81372073 https://www.encodeproject.org/files/ENCFF320JKZ/@@download/ENCFF320JKZ.bed.gz hg19 released missing unfiltered alignments ENCFF519QZC bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF051LWI, ENCFF561GSY, ENCFF581ZJL, ENCFF777WTJ 7143401 ENCODE Processing Pipeline b28be6209e576830c06ae1bea8a3ed77 https://www.encodeproject.org/files/ENCFF519QZC/@@download/ENCFF519QZC.bed.gz hg19 released missing unfiltered alignments ENCFF766NVP bed narrowPeak conservative idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF001TDO, ENCFF165OLG, ENCFF320JKZ, ENCFF519QZC 758293 ENCODE Processing Pipeline 544fd964a347a9bea2097f2a3602f350 https://www.encodeproject.org/files/ENCFF766NVP/@@download/ENCFF766NVP.bed.gz hg19 released missing unfiltered alignments ENCFF886VSU bed narrowPeak optimal idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF001TDO, ENCFF165OLG, ENCFF320JKZ, ENCFF519QZC 870116 ENCODE Processing Pipeline 75a920f51d6077f2f65ffc7fadadfe2e https://www.encodeproject.org/files/ENCFF886VSU/@@download/ENCFF886VSU.bed.gz hg19 released missing unfiltered alignments ENCFF094JFK bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF016KRJ, ENCFF227IZS 7032330 ENCODE Processing Pipeline 9a29279856a44890c37faf2473456c0d https://www.encodeproject.org/files/ENCFF094JFK/@@download/ENCFF094JFK.bed.gz GRCh38 released missing unfiltered alignments ENCFF674ELX bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF880SVB, ENCFF910IKB 7142588 ENCODE Processing Pipeline 8edc8dd336c1d89969c7bb7a9406cd57 https://www.encodeproject.org/files/ENCFF674ELX/@@download/ENCFF674ELX.bed.gz GRCh38 released missing unfiltered alignments ENCFF004CAC bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF016KRJ, ENCFF227IZS, ENCFF880SVB, ENCFF910IKB 7139471 ENCODE Processing Pipeline e0c6ae7d13bd527fcf7f1ff344362747 https://www.encodeproject.org/files/ENCFF004CAC/@@download/ENCFF004CAC.bed.gz GRCh38 released missing unfiltered alignments ENCFF589RYN bed narrowPeak conservative idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF004CAC, ENCFF094JFK, ENCFF419RSJ, ENCFF674ELX 756706 ENCODE Processing Pipeline 998f12640990aa5f14f31b18b05e58d8 https://www.encodeproject.org/files/ENCFF589RYN/@@download/ENCFF589RYN.bed.gz GRCh38 released missing unfiltered alignments ENCFF785BTP bed narrowPeak optimal idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF004CAC, ENCFF094JFK, ENCFF419RSJ, ENCFF674ELX 869837 ENCODE Processing Pipeline 858e8076f6d72cab574d40906762dc53 https://www.encodeproject.org/files/ENCFF785BTP/@@download/ENCFF785BTP.bed.gz GRCh38 released missing unfiltered alignments ENCFF508MDN bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF518TII, ENCFF581ZJL 6690900 ENCODE Processing Pipeline 04bd69cb516b2ca5310ee105263c240d https://www.encodeproject.org/files/ENCFF508MDN/@@download/ENCFF508MDN.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF505XYY bed narrowPeak conservative idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF231LOJ, ENCFF370RBU, ENCFF508MDN 90306 ENCODE Processing Pipeline ba8c797d9cd4eb7d4d8f76fe9d65c0ae https://www.encodeproject.org/files/ENCFF505XYY/@@download/ENCFF505XYY.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF231LOJ bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF134HTY, ENCFF518TII, ENCFF581ZJL 7221782 ENCODE Processing Pipeline 7ae8cbc53fa189cbfe53de27f75f9909 https://www.encodeproject.org/files/ENCFF231LOJ/@@download/ENCFF231LOJ.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF462FRU bed narrowPeak optimal idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF231LOJ, ENCFF370RBU, ENCFF508MDN 140167 ENCODE Processing Pipeline 1426f48c300e84e812d6c2bc81cb4162 https://www.encodeproject.org/files/ENCFF462FRU/@@download/ENCFF462FRU.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF370RBU bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF134HTY 6668633 ENCODE Processing Pipeline 508447dc5f2ece5fee0b0816bac0d5c7 https://www.encodeproject.org/files/ENCFF370RBU/@@download/ENCFF370RBU.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF460KXU bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF229VMU, ENCFF910IKB 6559854 ENCODE Processing Pipeline d5c43ac0583934baf38c2668a9ac59ab https://www.encodeproject.org/files/ENCFF460KXU/@@download/ENCFF460KXU.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF004DDR bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF227IZS, ENCFF802CIM 6486265 ENCODE Processing Pipeline 950043a6f5ce35dfb7dabf5ef9a8112d https://www.encodeproject.org/files/ENCFF004DDR/@@download/ENCFF004DDR.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF417RJF bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF227IZS, ENCFF229VMU, ENCFF802CIM, ENCFF910IKB 7197461 ENCODE Processing Pipeline 1185fef69c066d37829c4115ce75ec24 https://www.encodeproject.org/files/ENCFF417RJF/@@download/ENCFF417RJF.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF988OXX bed narrowPeak optimal idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF004DDR, ENCFF417RJF, ENCFF419RSJ, ENCFF460KXU 134417 ENCODE Processing Pipeline 5c57af4ee5d1b18dd20c07695adbcf98 https://www.encodeproject.org/files/ENCFF988OXX/@@download/ENCFF988OXX.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF111EXG bed narrowPeak conservative idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF004DDR, ENCFF417RJF, ENCFF419RSJ, ENCFF460KXU 89302 ENCODE Processing Pipeline 322741a82aca469029f5129e9f70f9f0 https://www.encodeproject.org/files/ENCFF111EXG/@@download/ENCFF111EXG.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF181NNV bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF150PLO, ENCFF335IPE, ENCFF660MJY, ENCFF879OQC 5633586 ENCODE Processing Pipeline bf9643e4324ed066be22a990eb61e8f0 https://www.encodeproject.org/files/ENCFF181NNV/@@download/ENCFF181NNV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF688TJX bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF660MJY 4209685 ENCODE Processing Pipeline 99e76d8e305893efffbd5686a4d47778 https://www.encodeproject.org/files/ENCFF688TJX/@@download/ENCFF688TJX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF292NAI bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF150PLO, ENCFF879OQC 4277069 ENCODE Processing Pipeline 3e2b5051cc3a350a4bd7cd2457d15ab5 https://www.encodeproject.org/files/ENCFF292NAI/@@download/ENCFF292NAI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF483AVE bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF925CYF 4078694 ENCODE Processing Pipeline c1a56fea78e8144600e1f12369ef6cf9 https://www.encodeproject.org/files/ENCFF483AVE/@@download/ENCFF483AVE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF527XGE bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF257QQX 4058451 ENCODE Processing Pipeline 9b2617dc9392137a9af23097f5df0869 https://www.encodeproject.org/files/ENCFF527XGE/@@download/ENCFF527XGE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF826QOQ bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF257QQX, ENCFF925CYF 5319665 ENCODE Processing Pipeline f529bb96d7a45d74efdcdf9788a64297 https://www.encodeproject.org/files/ENCFF826QOQ/@@download/ENCFF826QOQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF056LZZ bed narrowPeak conservative idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF483AVE, ENCFF527XGE, ENCFF826QOQ 1975 ENCODE Processing Pipeline abe16d70db6d7a3517d4fbd275899bed https://www.encodeproject.org/files/ENCFF056LZZ/@@download/ENCFF056LZZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF186MFI bed narrowPeak optimal idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF483AVE, ENCFF527XGE, ENCFF826QOQ 3663 ENCODE Processing Pipeline 4f7ac6d1c8c85892792cdff04e1d7c4a https://www.encodeproject.org/files/ENCFF186MFI/@@download/ENCFF186MFI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF665VTI bed narrowPeak conservative idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF181NNV, ENCFF292NAI, ENCFF688TJX 1656 ENCODE Processing Pipeline 442ee9ea6411079615fc9490034b8777 https://www.encodeproject.org/files/ENCFF665VTI/@@download/ENCFF665VTI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF870PWV bed narrowPeak optimal idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF181NNV, ENCFF292NAI, ENCFF688TJX 3045 ENCODE Processing Pipeline 986967daa8d46a11dc6651f790c0f80b https://www.encodeproject.org/files/ENCFF870PWV/@@download/ENCFF870PWV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length missing unfiltered alignments ENCFF002CLU bed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 495891 ENCODE Consortium Analysis Working Group b27d8f475ea230f1eb132ba49fd7bffe https://www.encodeproject.org/files/ENCFF002CLU/@@download/ENCFF002CLU.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF600KSR bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF827SLL 4618643 ENCODE Processing Pipeline f80fb0a330e853076d1ecde97c30d612 https://www.encodeproject.org/files/ENCFF600KSR/@@download/ENCFF600KSR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF387JQM bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF823GCX, ENCFF913HVS 2327422 ENCODE Processing Pipeline 919ab98f1062428b5bacc0e4b1fa2c45 https://www.encodeproject.org/files/ENCFF387JQM/@@download/ENCFF387JQM.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF111LUX bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234NVU, ENCFF823GCX, ENCFF827SLL, ENCFF913HVS 5407264 ENCODE Processing Pipeline 8151ed30cf0e34d025af1edbe8c3f1f9 https://www.encodeproject.org/files/ENCFF111LUX/@@download/ENCFF111LUX.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF160TXQ bed narrowPeak conservative idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF111LUX, ENCFF387JQM, ENCFF419RSJ, ENCFF600KSR 336013 ENCODE Processing Pipeline 4b878558672672e2613aaced03c649fe https://www.encodeproject.org/files/ENCFF160TXQ/@@download/ENCFF160TXQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF533GSH bed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF111LUX, ENCFF387JQM, ENCFF419RSJ, ENCFF600KSR 533841 ENCODE Processing Pipeline 7d606acf8a9036afa2f4744e0e01b98b https://www.encodeproject.org/files/ENCFF533GSH/@@download/ENCFF533GSH.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, moderate library complexity, low read length biological replicates with identical biosample insufficient read depth, poor library complexity, severe bottlenecking ENCFF945CSK bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF634KQT, ENCFF647SZO 6038101 ENCODE Processing Pipeline 69fccc2938f61aece15908d669cb1b01 https://www.encodeproject.org/files/ENCFF945CSK/@@download/ENCFF945CSK.bed.gz GRCh38 released missing unfiltered alignments ENCFF688SPJ bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF623MQU, ENCFF647SZO 5966749 ENCODE Processing Pipeline e7ccab97c6560c425c2d6487a2b9d0c9 https://www.encodeproject.org/files/ENCFF688SPJ/@@download/ENCFF688SPJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF754RLJ bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF623MQU, ENCFF634KQT, ENCFF647SZO 6910152 ENCODE Processing Pipeline 7a8a84499bc4687e33636cc2591dae5a https://www.encodeproject.org/files/ENCFF754RLJ/@@download/ENCFF754RLJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF166MJJ bed narrowPeak conservative idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF688SPJ, ENCFF754RLJ, ENCFF945CSK 132744 ENCODE Processing Pipeline 0999afd2ed37c5ba1e7f70ff49716588 https://www.encodeproject.org/files/ENCFF166MJJ/@@download/ENCFF166MJJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF863WCN bed narrowPeak optimal idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF688SPJ, ENCFF754RLJ, ENCFF945CSK 172340 ENCODE Processing Pipeline a10e035162770658df2a39f20f34dc49 https://www.encodeproject.org/files/ENCFF863WCN/@@download/ENCFF863WCN.bed.gz GRCh38 released missing unfiltered alignments ENCFF437EBC bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF090MZL, ENCFF472AKN 6044717 ENCODE Processing Pipeline 79c1ec872125b7c061e60ab15a3e95fc https://www.encodeproject.org/files/ENCFF437EBC/@@download/ENCFF437EBC.bed.gz hg19 released missing unfiltered alignments ENCFF672YBV bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF090MZL, ENCFF472AKN, ENCFF572JRO 6911844 ENCODE Processing Pipeline e2e7d31e4b98fccede99c91efacc1ffc https://www.encodeproject.org/files/ENCFF672YBV/@@download/ENCFF672YBV.bed.gz hg19 released missing unfiltered alignments ENCFF878TRQ bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF472AKN, ENCFF572JRO 5963655 ENCODE Processing Pipeline 9d8706b5041da11aef4b0eed9722590d https://www.encodeproject.org/files/ENCFF878TRQ/@@download/ENCFF878TRQ.bed.gz hg19 released missing unfiltered alignments ENCFF850QMO bed narrowPeak conservative idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF437EBC, ENCFF672YBV, ENCFF878TRQ 136496 ENCODE Processing Pipeline 7f00bcb2cb9f6253e167186bb42edc00 https://www.encodeproject.org/files/ENCFF850QMO/@@download/ENCFF850QMO.bed.gz hg19 released missing unfiltered alignments ENCFF196DHR bed narrowPeak optimal idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF437EBC, ENCFF672YBV, ENCFF878TRQ 178677 ENCODE Processing Pipeline d604bcfbecd8c71778b4f1843c67dfd9 https://www.encodeproject.org/files/ENCFF196DHR/@@download/ENCFF196DHR.bed.gz hg19 released missing unfiltered alignments ENCFF767VQM bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF887LAD, ENCFF910IKB 6707535 ENCODE Processing Pipeline f275d65537634a8adf1ddae792b22340 https://www.encodeproject.org/files/ENCFF767VQM/@@download/ENCFF767VQM.bed.gz GRCh38 released missing unfiltered alignments ENCFF959DNJ bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF777ZPZ 7042364 ENCODE Processing Pipeline 55ad10afb1c93666b48ca7f83f5eac4d https://www.encodeproject.org/files/ENCFF959DNJ/@@download/ENCFF959DNJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF442TDR bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF777ZPZ, ENCFF887LAD, ENCFF910IKB 7287634 ENCODE Processing Pipeline 279736b0d88de11871852ef1e18ec977 https://www.encodeproject.org/files/ENCFF442TDR/@@download/ENCFF442TDR.bed.gz GRCh38 released missing unfiltered alignments ENCFF037UMP bed narrowPeak conservative idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF442TDR, ENCFF767VQM, ENCFF959DNJ 378663 ENCODE Processing Pipeline c26fa1023ac535b700fd89dca658cdbd https://www.encodeproject.org/files/ENCFF037UMP/@@download/ENCFF037UMP.bed.gz GRCh38 released missing unfiltered alignments ENCFF010AIG bed narrowPeak optimal idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF442TDR, ENCFF767VQM, ENCFF959DNJ 476775 ENCODE Processing Pipeline 1066a28ac5d170f198afbf05a1d694b8 https://www.encodeproject.org/files/ENCFF010AIG/@@download/ENCFF010AIG.bed.gz GRCh38 released missing unfiltered alignments ENCFF768MUF bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF069MNA 7062306 ENCODE Processing Pipeline 134d35f18b36ac678477cb75e19a27a2 https://www.encodeproject.org/files/ENCFF768MUF/@@download/ENCFF768MUF.bed.gz hg19 released missing unfiltered alignments ENCFF743CIS bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF463KKL, ENCFF581ZJL 6703465 ENCODE Processing Pipeline f4e5c9c63dc8c1100f49bb50b9cad7b2 https://www.encodeproject.org/files/ENCFF743CIS/@@download/ENCFF743CIS.bed.gz hg19 released missing unfiltered alignments ENCFF948VWR bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF069MNA, ENCFF463KKL, ENCFF581ZJL 7288631 ENCODE Processing Pipeline fd4e7234862d196afe25c7a47a39f3bc https://www.encodeproject.org/files/ENCFF948VWR/@@download/ENCFF948VWR.bed.gz hg19 released missing unfiltered alignments ENCFF460XQR bed narrowPeak conservative idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF743CIS, ENCFF768MUF, ENCFF948VWR 376774 ENCODE Processing Pipeline 2af86103d1a85a8795d53e5b6bd3a118 https://www.encodeproject.org/files/ENCFF460XQR/@@download/ENCFF460XQR.bed.gz hg19 released missing unfiltered alignments ENCFF440JJW bed narrowPeak optimal idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF743CIS, ENCFF768MUF, ENCFF948VWR 474010 ENCODE Processing Pipeline 8e35e0276097b2e8621be227dd056368 https://www.encodeproject.org/files/ENCFF440JJW/@@download/ENCFF440JJW.bed.gz hg19 released missing unfiltered alignments ENCFF804EPQ bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF350LLA, ENCFF581ZJL, ENCFF866PHS 7186272 ENCODE Processing Pipeline cd57a51b80df2d7d183804360fba3f62 https://www.encodeproject.org/files/ENCFF804EPQ/@@download/ENCFF804EPQ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF805KEB bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF350LLA 6635169 ENCODE Processing Pipeline 45e1425a9acf2feddb601a4f89b81aae https://www.encodeproject.org/files/ENCFF805KEB/@@download/ENCFF805KEB.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF847FHY bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF581ZJL, ENCFF866PHS 6320438 ENCODE Processing Pipeline 2aa8318060a352cb9fc918b08c5f97b7 https://www.encodeproject.org/files/ENCFF847FHY/@@download/ENCFF847FHY.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF778XYS bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF182YDN 6218179 ENCODE Processing Pipeline 3da93f5c53738804b6f3c19fd34f13f9 https://www.encodeproject.org/files/ENCFF778XYS/@@download/ENCFF778XYS.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF163BVD bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF855NIZ 6514222 ENCODE Processing Pipeline 326fb2e02f8f48898d67623e69d5cf6f https://www.encodeproject.org/files/ENCFF163BVD/@@download/ENCFF163BVD.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF153UAP bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF182YDN, ENCFF855NIZ 7099573 ENCODE Processing Pipeline c3516d69e6a0ace27b9170975ccf5a4b https://www.encodeproject.org/files/ENCFF153UAP/@@download/ENCFF153UAP.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF805OCR bed narrowPeak conservative idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF153UAP, ENCFF163BVD, ENCFF419RSJ, ENCFF778XYS 234353 ENCODE Processing Pipeline 74c977c79ee030ee6a832247710f63a5 https://www.encodeproject.org/files/ENCFF805OCR/@@download/ENCFF805OCR.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF778PWE bed narrowPeak optimal idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF153UAP, ENCFF163BVD, ENCFF419RSJ, ENCFF778XYS 314329 ENCODE Processing Pipeline 4226c87a701f4ad111bfd234293ec22e https://www.encodeproject.org/files/ENCFF778PWE/@@download/ENCFF778PWE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF869BQV bed narrowPeak conservative idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF804EPQ, ENCFF805KEB, ENCFF847FHY 211228 ENCODE Processing Pipeline a5794914da85bfbe1ea16625734ec816 https://www.encodeproject.org/files/ENCFF869BQV/@@download/ENCFF869BQV.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF699ZII bed narrowPeak optimal idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF804EPQ, ENCFF805KEB, ENCFF847FHY 287070 ENCODE Processing Pipeline 4775f57db3e59a973c0c857c17c0de9b https://www.encodeproject.org/files/ENCFF699ZII/@@download/ENCFF699ZII.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF842YAM bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF241GJI, ENCFF910IKB 6959549 ENCODE Processing Pipeline 9027af2dd3fe4d3989281e196936e643 https://www.encodeproject.org/files/ENCFF842YAM/@@download/ENCFF842YAM.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF411DEF bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF647FZE 6715667 ENCODE Processing Pipeline 8bba1fe00b543f5a7d80e5f2d0c513bc https://www.encodeproject.org/files/ENCFF411DEF/@@download/ENCFF411DEF.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF889ODV bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF241GJI, ENCFF647FZE, ENCFF910IKB 7252384 ENCODE Processing Pipeline fcf4c685721726eb4482913caf594c51 https://www.encodeproject.org/files/ENCFF889ODV/@@download/ENCFF889ODV.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF801KEW bed narrowPeak optimal idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF002ZRH, ENCFF411DEF, ENCFF419RSJ, ENCFF724MJA 335713 ENCODE Processing Pipeline 2b67efa03e5a670d42fcb599b73d4122 https://www.encodeproject.org/files/ENCFF801KEW/@@download/ENCFF801KEW.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF843MEU bed narrowPeak conservative idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF002ZRH, ENCFF411DEF, ENCFF419RSJ, ENCFF724MJA 198575 ENCODE Processing Pipeline 1db4df0b0089fadf4b6468b67890deff https://www.encodeproject.org/files/ENCFF843MEU/@@download/ENCFF843MEU.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF724MJA bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF241GJI, ENCFF910IKB 6959549 ENCODE Processing Pipeline e73af50fb431a48550eb58cc31b3fffd https://www.encodeproject.org/files/ENCFF724MJA/@@download/ENCFF724MJA.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF002ZRH bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF241GJI, ENCFF647FZE, ENCFF910IKB 7252384 ENCODE Processing Pipeline 731228a3c1acb8f944968956491a282c https://www.encodeproject.org/files/ENCFF002ZRH/@@download/ENCFF002ZRH.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF407VAS bed narrowPeak conservative idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF253PLF, ENCFF387NDE, ENCFF658ZHZ 199852 ENCODE Processing Pipeline 6f75192193f0a2bef5ddc99e7a21e518 https://www.encodeproject.org/files/ENCFF407VAS/@@download/ENCFF407VAS.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF769GYG bed narrowPeak optimal idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF253PLF, ENCFF387NDE, ENCFF658ZHZ 334404 ENCODE Processing Pipeline 9721f8e11cc0a98b2e92a7ee4f682542 https://www.encodeproject.org/files/ENCFF769GYG/@@download/ENCFF769GYG.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF253PLF bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF950LGW 6719475 ENCODE Processing Pipeline f3894190ca5645019fbfae164354c932 https://www.encodeproject.org/files/ENCFF253PLF/@@download/ENCFF253PLF.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF387NDE bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF412LRS, ENCFF581ZJL 6967086 ENCODE Processing Pipeline 36aa5a16f94265a8106622b095f3da35 https://www.encodeproject.org/files/ENCFF387NDE/@@download/ENCFF387NDE.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF658ZHZ bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF412LRS, ENCFF581ZJL, ENCFF950LGW 7251771 ENCODE Processing Pipeline c420bf9bfec2cbbaec23f1b7ad1dc794 https://www.encodeproject.org/files/ENCFF658ZHZ/@@download/ENCFF658ZHZ.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF714QFT bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF387BDW, ENCFF910IKB 7036368 ENCODE Processing Pipeline 83a131a0e537cbc0f623d4adfc8b9ec2 https://www.encodeproject.org/files/ENCFF714QFT/@@download/ENCFF714QFT.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF361OHW bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF294UTM 6964158 ENCODE Processing Pipeline ee9b3d8b92752a01cb4f31f7aea4bdd7 https://www.encodeproject.org/files/ENCFF361OHW/@@download/ENCFF361OHW.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF993DRQ bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF294UTM, ENCFF387BDW, ENCFF910IKB 7106346 ENCODE Processing Pipeline 924a15247057c31eb932639946fd80a9 https://www.encodeproject.org/files/ENCFF993DRQ/@@download/ENCFF993DRQ.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF355IGX bed narrowPeak conservative idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF361OHW, ENCFF419RSJ, ENCFF714QFT, ENCFF993DRQ 414697 ENCODE Processing Pipeline cd9b36fedd530fc6d8ce1f485971b921 https://www.encodeproject.org/files/ENCFF355IGX/@@download/ENCFF355IGX.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF435SZS bed narrowPeak optimal idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF361OHW, ENCFF419RSJ, ENCFF714QFT, ENCFF993DRQ 628471 ENCODE Processing Pipeline 8bfd54d7b34ff6b8b5afaebb7957e9f7 https://www.encodeproject.org/files/ENCFF435SZS/@@download/ENCFF435SZS.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF216OFC bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF868URB 7046613 ENCODE Processing Pipeline 46d98ee5e5f4ed73ee11ee9bf5aa5bd7 https://www.encodeproject.org/files/ENCFF216OFC/@@download/ENCFF216OFC.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF704QCS bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF115WLQ, ENCFF581ZJL, ENCFF868URB 7123376 ENCODE Processing Pipeline 803bc987900fd64dee1c82633eb30979 https://www.encodeproject.org/files/ENCFF704QCS/@@download/ENCFF704QCS.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF118OEM bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF115WLQ 6930776 ENCODE Processing Pipeline 7ebe12154b71d7b0c29387f0c8cd6fa8 https://www.encodeproject.org/files/ENCFF118OEM/@@download/ENCFF118OEM.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF811SJN bed narrowPeak conservative idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF118OEM, ENCFF216OFC, ENCFF704QCS 415363 ENCODE Processing Pipeline 9d94ddf8c251fb24c62858a99c618dc8 https://www.encodeproject.org/files/ENCFF811SJN/@@download/ENCFF811SJN.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF622RBW bed narrowPeak optimal idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF118OEM, ENCFF216OFC, ENCFF704QCS 630202 ENCODE Processing Pipeline 5f057957225cf1e6e0f6ab38a3f8c7fd https://www.encodeproject.org/files/ENCFF622RBW/@@download/ENCFF622RBW.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF157PBO bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF138LNW, ENCFF581ZJL 7197429 ENCODE Processing Pipeline 0af8663cfafe4ae8f1f42901e348933e https://www.encodeproject.org/files/ENCFF157PBO/@@download/ENCFF157PBO.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF109VMO bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF839GLQ 7254397 ENCODE Processing Pipeline 946487180b55d5e1e6a68781d9572952 https://www.encodeproject.org/files/ENCFF109VMO/@@download/ENCFF109VMO.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF656WXD bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF138LNW, ENCFF581ZJL, ENCFF839GLQ 7295050 ENCODE Processing Pipeline 15bc7c82e626a458d3a5a1cbc17cce62 https://www.encodeproject.org/files/ENCFF656WXD/@@download/ENCFF656WXD.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF248IWJ bed narrowPeak optimal idr thresholded peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF109VMO, ENCFF157PBO, ENCFF656WXD 771608 ENCODE Processing Pipeline 5483386eae2504c8c9ca1e71d470c6a3 https://www.encodeproject.org/files/ENCFF248IWJ/@@download/ENCFF248IWJ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF547VDF bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF438GBD 7104038 ENCODE Processing Pipeline d43a3f6ae0d1a9715fb9d72539877e67 https://www.encodeproject.org/files/ENCFF547VDF/@@download/ENCFF547VDF.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF714KCD bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF601CVJ 7122462 ENCODE Processing Pipeline 75f79b02ff8028b92a6793ceaa149be1 https://www.encodeproject.org/files/ENCFF714KCD/@@download/ENCFF714KCD.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF516BJP bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF438GBD, ENCFF601CVJ 7200636 ENCODE Processing Pipeline 58c7e607e48ad9107d75d25fb9fd3249 https://www.encodeproject.org/files/ENCFF516BJP/@@download/ENCFF516BJP.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF285MBX bed narrowPeak optimal idr thresholded peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF516BJP, ENCFF547VDF, ENCFF714KCD 745128 ENCODE Processing Pipeline b66ab75e232ac34877a053faf9db5195 https://www.encodeproject.org/files/ENCFF285MBX/@@download/ENCFF285MBX.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF196NEV bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF729TUK, ENCFF879OQC 4963186 ENCODE Processing Pipeline bc72f3c31d4c4930de1d951cb69f3c28 https://www.encodeproject.org/files/ENCFF196NEV/@@download/ENCFF196NEV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF603ABN bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF707DVP 4472627 ENCODE Processing Pipeline 81881c2eb3c994ca231224ff2b71f64a https://www.encodeproject.org/files/ENCFF603ABN/@@download/ENCFF603ABN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF671UIB bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF335IPE, ENCFF707DVP, ENCFF729TUK, ENCFF879OQC 6136465 ENCODE Processing Pipeline 35579a6a058ce6955e06f44bea582a10 https://www.encodeproject.org/files/ENCFF671UIB/@@download/ENCFF671UIB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF183SEC bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF576EDK 4267076 ENCODE Processing Pipeline 0a40a4133c1a9c2aae902a2c88388f6b https://www.encodeproject.org/files/ENCFF183SEC/@@download/ENCFF183SEC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF120AAX bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF799RPS 4686761 ENCODE Processing Pipeline d6992f62b5549aee9691233e824010d2 https://www.encodeproject.org/files/ENCFF120AAX/@@download/ENCFF120AAX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF179GMV bed narrowPeak conservative idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF120AAX, ENCFF183SEC, ENCFF274WAV, ENCFF419RSJ 17075 ENCODE Processing Pipeline becb48a377e025017d3900afa248223f https://www.encodeproject.org/files/ENCFF179GMV/@@download/ENCFF179GMV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF274WAV bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF576EDK, ENCFF799RPS 5919282 ENCODE Processing Pipeline 2a04fe2ed814b375771089eae8ec3d08 https://www.encodeproject.org/files/ENCFF274WAV/@@download/ENCFF274WAV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF797OWK bed narrowPeak optimal idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF120AAX, ENCFF183SEC, ENCFF274WAV, ENCFF419RSJ 25073 ENCODE Processing Pipeline 84185a6b0f28628215c2fd54a269237b https://www.encodeproject.org/files/ENCFF797OWK/@@download/ENCFF797OWK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF392TKK bed narrowPeak optimal idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF001TDO, ENCFF196NEV, ENCFF603ABN, ENCFF671UIB 21050 ENCODE Processing Pipeline c3bda9e03d77f48fd2712a1af5c26a09 https://www.encodeproject.org/files/ENCFF392TKK/@@download/ENCFF392TKK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF054RBS bed narrowPeak conservative idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF001TDO, ENCFF196NEV, ENCFF603ABN, ENCFF671UIB 14326 ENCODE Processing Pipeline 2b767586df97e0ca28fcea7ab899d400 https://www.encodeproject.org/files/ENCFF054RBS/@@download/ENCFF054RBS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF902RHR bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF158LEE, ENCFF581ZJL 7166913 ENCODE Processing Pipeline c79d8243bfba48199c241beffa9d9377 https://www.encodeproject.org/files/ENCFF902RHR/@@download/ENCFF902RHR.bed.gz hg19 released missing unfiltered alignments ENCFF452CEM bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF051LWI, ENCFF204XLM 7193583 ENCODE Processing Pipeline db70e968a32451c5251dbc5acdc4e646 https://www.encodeproject.org/files/ENCFF452CEM/@@download/ENCFF452CEM.bed.gz hg19 released missing unfiltered alignments ENCFF548OKF bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF051LWI, ENCFF158LEE, ENCFF204XLM, ENCFF581ZJL 7178717 ENCODE Processing Pipeline 5da3dc4f11b407e1074dcdf274dc4ad4 https://www.encodeproject.org/files/ENCFF548OKF/@@download/ENCFF548OKF.bed.gz hg19 released missing unfiltered alignments ENCFF484HCG bed narrowPeak optimal idr thresholded peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF001TDO, ENCFF452CEM, ENCFF548OKF, ENCFF902RHR 545686 ENCODE Processing Pipeline edb704f30f5be1dd1284828f92f6a8ed https://www.encodeproject.org/files/ENCFF484HCG/@@download/ENCFF484HCG.bed.gz hg19 released missing unfiltered alignments ENCFF986PTF bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF079TBV, ENCFF910IKB 7110923 ENCODE Processing Pipeline 6ae8ef77cf4ff11989591a6ae4bc6d3e https://www.encodeproject.org/files/ENCFF986PTF/@@download/ENCFF986PTF.bed.gz GRCh38 released missing unfiltered alignments ENCFF680XEG bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF227IZS, ENCFF772XIR 7119635 ENCODE Processing Pipeline afe45810bce07a58c7319d9e41dfc2d1 https://www.encodeproject.org/files/ENCFF680XEG/@@download/ENCFF680XEG.bed.gz GRCh38 released missing unfiltered alignments ENCFF710LBM bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF079TBV, ENCFF227IZS, ENCFF772XIR, ENCFF910IKB 7188257 ENCODE Processing Pipeline 8b5cc6a9a4c3247b7e707846b9ce23e0 https://www.encodeproject.org/files/ENCFF710LBM/@@download/ENCFF710LBM.bed.gz GRCh38 released missing unfiltered alignments ENCFF721DPQ bed narrowPeak optimal idr thresholded peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF680XEG, ENCFF710LBM, ENCFF986PTF 544728 ENCODE Processing Pipeline e42a19231a68bed191cd2e322f964da2 https://www.encodeproject.org/files/ENCFF721DPQ/@@download/ENCFF721DPQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF723ESB bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF475POO, ENCFF581ZJL 6989631 ENCODE Processing Pipeline c5a9c9206e878fe8941bc3ea139ce753 https://www.encodeproject.org/files/ENCFF723ESB/@@download/ENCFF723ESB.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF669ACI bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF572MZM 7096163 ENCODE Processing Pipeline b03385abd664a172cb86eefdadf9db0a https://www.encodeproject.org/files/ENCFF669ACI/@@download/ENCFF669ACI.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF038VEX bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF475POO, ENCFF572MZM, ENCFF581ZJL 7196410 ENCODE Processing Pipeline 5c35cc55400ee755f9c829f3ec65fbd0 https://www.encodeproject.org/files/ENCFF038VEX/@@download/ENCFF038VEX.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF306ZCS bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF752FIR 6904325 ENCODE Processing Pipeline 6ff0167ab161220441f612e445384f5c https://www.encodeproject.org/files/ENCFF306ZCS/@@download/ENCFF306ZCS.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF794ZCA bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF013MXK, ENCFF910IKB 6884550 ENCODE Processing Pipeline e8a0848a77d27b6f4b0d2db77210cb99 https://www.encodeproject.org/files/ENCFF794ZCA/@@download/ENCFF794ZCA.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF957QFG bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF013MXK, ENCFF227IZS, ENCFF752FIR, ENCFF910IKB 7097074 ENCODE Processing Pipeline 542ae9664bb7ff56bbe3b4b0763a9189 https://www.encodeproject.org/files/ENCFF957QFG/@@download/ENCFF957QFG.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF994OQH bed narrowPeak optimal idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF306ZCS, ENCFF419RSJ, ENCFF794ZCA, ENCFF957QFG 959869 ENCODE Processing Pipeline c34f95ee3df4e2e3e5092c6da750dd67 https://www.encodeproject.org/files/ENCFF994OQH/@@download/ENCFF994OQH.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF214VWR bed narrowPeak conservative idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF306ZCS, ENCFF419RSJ, ENCFF794ZCA, ENCFF957QFG 860812 ENCODE Processing Pipeline 2f15c06fecd9a0b8c63cdecd7e14a905 https://www.encodeproject.org/files/ENCFF214VWR/@@download/ENCFF214VWR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF570TDY bed narrowPeak conservative idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF038VEX, ENCFF669ACI, ENCFF723ESB 759062 ENCODE Processing Pipeline b4cd03af3d9947e55e0ac2f0e7a7278e https://www.encodeproject.org/files/ENCFF570TDY/@@download/ENCFF570TDY.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF968JVX bed narrowPeak optimal idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF038VEX, ENCFF669ACI, ENCFF723ESB 853540 ENCODE Processing Pipeline 684bdc0057a6241a64f889a8afb4cd56 https://www.encodeproject.org/files/ENCFF968JVX/@@download/ENCFF968JVX.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF674FOQ bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF239DXH, ENCFF581ZJL 6613524 ENCODE Processing Pipeline 68b5c4aee6f13205eba0cc76e6b34593 https://www.encodeproject.org/files/ENCFF674FOQ/@@download/ENCFF674FOQ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF235FNK bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF239DXH, ENCFF581ZJL, ENCFF943WPZ 7244029 ENCODE Processing Pipeline 9badfc32837ff8bfaac8d89424f31cba https://www.encodeproject.org/files/ENCFF235FNK/@@download/ENCFF235FNK.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF338NAH bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF943WPZ 6424347 ENCODE Processing Pipeline a0e6904c4853be483cc4109cec75962b https://www.encodeproject.org/files/ENCFF338NAH/@@download/ENCFF338NAH.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF056XZH bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF437UWB, ENCFF530UEA 7229581 ENCODE Processing Pipeline e45d991eb36013ae2a8925b21f28e85a https://www.encodeproject.org/files/ENCFF056XZH/@@download/ENCFF056XZH.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF417SCW bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF437UWB 6483812 ENCODE Processing Pipeline 7705a328b6d10e6e54b76e6f1d028d3f https://www.encodeproject.org/files/ENCFF417SCW/@@download/ENCFF417SCW.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF745PQT bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF530UEA 6313784 ENCODE Processing Pipeline 3f0c6b3c3d9bc21c056b850a3413da4c https://www.encodeproject.org/files/ENCFF745PQT/@@download/ENCFF745PQT.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF594KPG bed narrowPeak conservative idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF056XZH, ENCFF417SCW, ENCFF419RSJ, ENCFF745PQT 370146 ENCODE Processing Pipeline c74b7f4b0ef067d037295ce82b74a579 https://www.encodeproject.org/files/ENCFF594KPG/@@download/ENCFF594KPG.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF158FUG bed narrowPeak optimal idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF056XZH, ENCFF417SCW, ENCFF419RSJ, ENCFF745PQT 435320 ENCODE Processing Pipeline 7ac60df853db86986c8c15d8e9875565 https://www.encodeproject.org/files/ENCFF158FUG/@@download/ENCFF158FUG.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF157UUF bed narrowPeak optimal idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF235FNK, ENCFF338NAH, ENCFF674FOQ 360420 ENCODE Processing Pipeline f149fb690dd6079819477e00024ce227 https://www.encodeproject.org/files/ENCFF157UUF/@@download/ENCFF157UUF.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF739UMP bed narrowPeak conservative idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF235FNK, ENCFF338NAH, ENCFF674FOQ 297237 ENCODE Processing Pipeline ae1c7cdfdbb5cd15b1bfc698e6f18bd4 https://www.encodeproject.org/files/ENCFF739UMP/@@download/ENCFF739UMP.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF124ZGQ bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF650WIA 6505261 ENCODE Processing Pipeline a84f6e7f61469eeb3bde492893558f04 https://www.encodeproject.org/files/ENCFF124ZGQ/@@download/ENCFF124ZGQ.bed.gz hg19 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF457XPX bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF254KBN 6769825 ENCODE Processing Pipeline 4637ee3d180c920116d1cf40c67d71cf https://www.encodeproject.org/files/ENCFF457XPX/@@download/ENCFF457XPX.bed.gz hg19 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF103VVN bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF254KBN, ENCFF581ZJL, ENCFF650WIA 7210514 ENCODE Processing Pipeline 3dc7e986e4f8a8b49de1471db3ef0890 https://www.encodeproject.org/files/ENCFF103VVN/@@download/ENCFF103VVN.bed.gz hg19 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF030QKC bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF168TBA, ENCFF910IKB 6293246 ENCODE Processing Pipeline 997d7f8b8a4ac0ac0f0ac4457caa2a48 https://www.encodeproject.org/files/ENCFF030QKC/@@download/ENCFF030QKC.bed.gz GRCh38 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF311WKM bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF024NZQ, ENCFF168TBA, ENCFF227IZS, ENCFF910IKB 7151332 ENCODE Processing Pipeline 0b353760a0bc06f90647bebb984bf6a3 https://www.encodeproject.org/files/ENCFF311WKM/@@download/ENCFF311WKM.bed.gz GRCh38 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF472VUW bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF024NZQ, ENCFF227IZS 6645313 ENCODE Processing Pipeline 8f69cc1736cecc40ef276565fdb0ef60 https://www.encodeproject.org/files/ENCFF472VUW/@@download/ENCFF472VUW.bed.gz GRCh38 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF691HAG bed narrowPeak conservative idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF030QKC, ENCFF311WKM, ENCFF419RSJ, ENCFF472VUW 203612 ENCODE Processing Pipeline 2d1f61f4db20de2a96edb002c3942e18 https://www.encodeproject.org/files/ENCFF691HAG/@@download/ENCFF691HAG.bed.gz GRCh38 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF740OPF bed narrowPeak optimal idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF030QKC, ENCFF311WKM, ENCFF419RSJ, ENCFF472VUW 316367 ENCODE Processing Pipeline 24167873343f8c9474b61ebc7b91c167 https://www.encodeproject.org/files/ENCFF740OPF/@@download/ENCFF740OPF.bed.gz GRCh38 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF924XJK bed narrowPeak conservative idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF103VVN, ENCFF124ZGQ, ENCFF457XPX 187397 ENCODE Processing Pipeline 933c6a190f9167d9a591e3cdecf88352 https://www.encodeproject.org/files/ENCFF924XJK/@@download/ENCFF924XJK.bed.gz hg19 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF096XMD bed narrowPeak optimal idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF103VVN, ENCFF124ZGQ, ENCFF457XPX 282692 ENCODE Processing Pipeline 59332e8ca90fc4507468b673efd55907 https://www.encodeproject.org/files/ENCFF096XMD/@@download/ENCFF096XMD.bed.gz hg19 released low read depth, borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF778NFD bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF051LWI, ENCFF675GYP 7067095 ENCODE Processing Pipeline 3555732e90f0ff054715edfa7fa639e3 https://www.encodeproject.org/files/ENCFF778NFD/@@download/ENCFF778NFD.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF388RWJ bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF397XVJ, ENCFF581ZJL 7022368 ENCODE Processing Pipeline c5f090b4652004481eb89024056e4c29 https://www.encodeproject.org/files/ENCFF388RWJ/@@download/ENCFF388RWJ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF108BVL bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF051LWI, ENCFF397XVJ, ENCFF581ZJL, ENCFF675GYP 7278648 ENCODE Processing Pipeline 2e985497367799e3ea0d43b1ad7cb110 https://www.encodeproject.org/files/ENCFF108BVL/@@download/ENCFF108BVL.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF139UBB bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF226IAA 7005465 ENCODE Processing Pipeline 9afe7615d59c4041bc392986e28402d5 https://www.encodeproject.org/files/ENCFF139UBB/@@download/ENCFF139UBB.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF930SRJ bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF632WSK 7022101 ENCODE Processing Pipeline 27898cff43da2d6384e20a271b264424 https://www.encodeproject.org/files/ENCFF930SRJ/@@download/ENCFF930SRJ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF673YDA bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF226IAA, ENCFF632WSK 7144801 ENCODE Processing Pipeline 0c2ac8d2fc662b8eba2083101a045794 https://www.encodeproject.org/files/ENCFF673YDA/@@download/ENCFF673YDA.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF909FRB bed narrowPeak conservative idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF139UBB, ENCFF419RSJ, ENCFF673YDA, ENCFF930SRJ 874272 ENCODE Processing Pipeline f0ab1dadc53548c21013b56ae11d10e0 https://www.encodeproject.org/files/ENCFF909FRB/@@download/ENCFF909FRB.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF556STK bed narrowPeak optimal idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF139UBB, ENCFF419RSJ, ENCFF673YDA, ENCFF930SRJ 1123859 ENCODE Processing Pipeline fbe90617a2d058c5b6c374a662588443 https://www.encodeproject.org/files/ENCFF556STK/@@download/ENCFF556STK.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF681IOP bed narrowPeak conservative idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF001TDO, ENCFF108BVL, ENCFF388RWJ, ENCFF778NFD 759324 ENCODE Processing Pipeline faa326900a794100ddc74dd9fb3cc602 https://www.encodeproject.org/files/ENCFF681IOP/@@download/ENCFF681IOP.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF408FQC bed narrowPeak optimal idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF001TDO, ENCFF108BVL, ENCFF388RWJ, ENCFF778NFD 974557 ENCODE Processing Pipeline a9f515a615c9736874c5b02b3ef2f106 https://www.encodeproject.org/files/ENCFF408FQC/@@download/ENCFF408FQC.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF156CAB bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF641ACA 7197623 ENCODE Processing Pipeline 258dc50cffc52d10458538e5364f12b1 https://www.encodeproject.org/files/ENCFF156CAB/@@download/ENCFF156CAB.bed.gz hg19 released missing unfiltered alignments ENCFF547QMS bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF269EAD 7104313 ENCODE Processing Pipeline 4b45735c8984edb6cb159083cf179107 https://www.encodeproject.org/files/ENCFF547QMS/@@download/ENCFF547QMS.bed.gz hg19 released missing unfiltered alignments ENCFF305RMT bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF269EAD, ENCFF581ZJL, ENCFF641ACA 7247504 ENCODE Processing Pipeline 7f3fff033890b11d8b8451fd6ea3f9f7 https://www.encodeproject.org/files/ENCFF305RMT/@@download/ENCFF305RMT.bed.gz hg19 released missing unfiltered alignments ENCFF995NIE bed narrowPeak optimal idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF156CAB, ENCFF305RMT, ENCFF547QMS 357758 ENCODE Processing Pipeline 19f29cf8d02b673dca79fcc242980eb8 https://www.encodeproject.org/files/ENCFF995NIE/@@download/ENCFF995NIE.bed.gz hg19 released missing unfiltered alignments ENCFF989TYW bed narrowPeak conservative idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF156CAB, ENCFF305RMT, ENCFF547QMS 201341 ENCODE Processing Pipeline dd1ddf189fed03527b9c39a64942b70b https://www.encodeproject.org/files/ENCFF989TYW/@@download/ENCFF989TYW.bed.gz hg19 released missing unfiltered alignments ENCFF493PNH bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF910IKB, ENCFF914TEL 7177371 ENCODE Processing Pipeline ceada2171c29e43d6dded5463b60324b https://www.encodeproject.org/files/ENCFF493PNH/@@download/ENCFF493PNH.bed.gz GRCh38 released missing unfiltered alignments ENCFF168SEL bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF122TGF, ENCFF227IZS 7051302 ENCODE Processing Pipeline 791dc456bd30725d113834a0b887ef5f https://www.encodeproject.org/files/ENCFF168SEL/@@download/ENCFF168SEL.bed.gz GRCh38 released missing unfiltered alignments ENCFF601RBH bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF122TGF, ENCFF227IZS, ENCFF910IKB, ENCFF914TEL 7249354 ENCODE Processing Pipeline 3b06902021f768b7994f8161cdce7bc6 https://www.encodeproject.org/files/ENCFF601RBH/@@download/ENCFF601RBH.bed.gz GRCh38 released missing unfiltered alignments ENCFF438DWU bed narrowPeak conservative idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF168SEL, ENCFF419RSJ, ENCFF493PNH, ENCFF601RBH 200296 ENCODE Processing Pipeline 12a1ab2c3e30f79bc7c2d1fb59dba39f https://www.encodeproject.org/files/ENCFF438DWU/@@download/ENCFF438DWU.bed.gz GRCh38 released missing unfiltered alignments ENCFF481TNF bed narrowPeak optimal idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF168SEL, ENCFF419RSJ, ENCFF493PNH, ENCFF601RBH 355021 ENCODE Processing Pipeline e342a3d251dfd1eb825e08c2f533a212 https://www.encodeproject.org/files/ENCFF481TNF/@@download/ENCFF481TNF.bed.gz GRCh38 released missing unfiltered alignments ENCFF001VOC bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1381827 Michael Snyder, Stanford 68ae1503a36a8e4e49d5435a7ef819da https://www.encodeproject.org/files/ENCFF001VOC/@@download/ENCFF001VOC.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF002CXL bed narrowPeak optimal idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 560754 ENCODE Consortium Analysis Working Group ec1717748eb321c02c89b809da728501 https://www.encodeproject.org/files/ENCFF002CXL/@@download/ENCFF002CXL.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF514SHW bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF982AFE 5253849 ENCODE Processing Pipeline fc4af747c1250ed6b3804674de683ec0 https://www.encodeproject.org/files/ENCFF514SHW/@@download/ENCFF514SHW.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF765ZUN bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF200PYZ 5325781 ENCODE Processing Pipeline 341de4fe2c24b5814c5309b5e306bd39 https://www.encodeproject.org/files/ENCFF765ZUN/@@download/ENCFF765ZUN.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF020TYZ bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF200PYZ, ENCFF982AFE 4291534 ENCODE Processing Pipeline 70b534cb6cc0392779a70100627fa218 https://www.encodeproject.org/files/ENCFF020TYZ/@@download/ENCFF020TYZ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF433PKW bed narrowPeak conservative idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF020TYZ, ENCFF419RSJ, ENCFF514SHW, ENCFF765ZUN 422586 ENCODE Processing Pipeline 1008d69a69a54bb582da6aab516adb4a https://www.encodeproject.org/files/ENCFF433PKW/@@download/ENCFF433PKW.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF755HCK bed narrowPeak optimal idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF020TYZ, ENCFF419RSJ, ENCFF514SHW, ENCFF765ZUN 507309 ENCODE Processing Pipeline 0f3d11026ed80414d813c56b0c574482 https://www.encodeproject.org/files/ENCFF755HCK/@@download/ENCFF755HCK.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF763UFC bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF367UIT 7147888 ENCODE Processing Pipeline 50903e83e12dbeb447c95ecffa403841 https://www.encodeproject.org/files/ENCFF763UFC/@@download/ENCFF763UFC.bed.gz hg19 released missing unfiltered alignments ENCFF279NYK bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF367HYB, ENCFF581ZJL 7069487 ENCODE Processing Pipeline b61f8701b5f98bac19965b927a3da8d4 https://www.encodeproject.org/files/ENCFF279NYK/@@download/ENCFF279NYK.bed.gz hg19 released missing unfiltered alignments ENCFF636VOC bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF367HYB, ENCFF367UIT, ENCFF581ZJL 7198879 ENCODE Processing Pipeline fe4dadc48f6e8f5c198831a8a6a8eb47 https://www.encodeproject.org/files/ENCFF636VOC/@@download/ENCFF636VOC.bed.gz hg19 released missing unfiltered alignments ENCFF467YYR bed narrowPeak conservative idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF279NYK, ENCFF636VOC, ENCFF763UFC 593124 ENCODE Processing Pipeline c17a6f033f7ecb8e5b252c35b091d271 https://www.encodeproject.org/files/ENCFF467YYR/@@download/ENCFF467YYR.bed.gz hg19 released missing unfiltered alignments ENCFF057ZUY bed narrowPeak optimal idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF279NYK, ENCFF636VOC, ENCFF763UFC 794464 ENCODE Processing Pipeline eb1f9eb14541c9c86ab5f62539332276 https://www.encodeproject.org/files/ENCFF057ZUY/@@download/ENCFF057ZUY.bed.gz hg19 released missing unfiltered alignments ENCFF765TQQ bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF207LND, ENCFF910IKB 7013733 ENCODE Processing Pipeline 708f056acdeb1efaaa27d0aa6c8f9642 https://www.encodeproject.org/files/ENCFF765TQQ/@@download/ENCFF765TQQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF347TKX bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF227IZS, ENCFF541XEW 7061712 ENCODE Processing Pipeline 820c5a667db657dc69c5388522ed5ad2 https://www.encodeproject.org/files/ENCFF347TKX/@@download/ENCFF347TKX.bed.gz GRCh38 released missing unfiltered alignments ENCFF536VKO bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF207LND, ENCFF227IZS, ENCFF541XEW, ENCFF910IKB 7155199 ENCODE Processing Pipeline 97145b67e6b8b9ac8f4e7b61938bfe69 https://www.encodeproject.org/files/ENCFF536VKO/@@download/ENCFF536VKO.bed.gz GRCh38 released missing unfiltered alignments ENCFF538UZE bed narrowPeak conservative idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF347TKX, ENCFF419RSJ, ENCFF536VKO, ENCFF765TQQ 579549 ENCODE Processing Pipeline 255d2c2f784199d077fe6369ae3b1551 https://www.encodeproject.org/files/ENCFF538UZE/@@download/ENCFF538UZE.bed.gz GRCh38 released missing unfiltered alignments ENCFF186JKG bed narrowPeak optimal idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF347TKX, ENCFF419RSJ, ENCFF536VKO, ENCFF765TQQ 787885 ENCODE Processing Pipeline 5fc56d41933b612a84f520ac8901c382 https://www.encodeproject.org/files/ENCFF186JKG/@@download/ENCFF186JKG.bed.gz GRCh38 released missing unfiltered alignments ENCFF845XVK bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF257OOQ, ENCFF712WXB, ENCFF779IQL, ENCFF790TAN 7376735 ENCODE Processing Pipeline 1d26ebf3c1f9e99501878d213800902e https://www.encodeproject.org/files/ENCFF845XVK/@@download/ENCFF845XVK.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF958TGL bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF257OOQ, ENCFF712WXB 7323182 ENCODE Processing Pipeline 23970b7cb7ad48e4cf709d42492a44b7 https://www.encodeproject.org/files/ENCFF958TGL/@@download/ENCFF958TGL.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF269JKK bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF712WXB, ENCFF779IQL, ENCFF790TAN 7262523 ENCODE Processing Pipeline e332104f07fa650f7a4071ecb253f7ec https://www.encodeproject.org/files/ENCFF269JKK/@@download/ENCFF269JKK.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF389LKZ bed narrowPeak conservative idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF269JKK, ENCFF419RSJ, ENCFF845XVK, ENCFF958TGL 72508 ENCODE Processing Pipeline 2a8f74f2a62d28f9df97c65648d86c32 https://www.encodeproject.org/files/ENCFF389LKZ/@@download/ENCFF389LKZ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF462AZY bed narrowPeak optimal idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF269JKK, ENCFF419RSJ, ENCFF845XVK, ENCFF958TGL 733892 ENCODE Processing Pipeline 5a66428f408e8eb4593f0ec2663cebff https://www.encodeproject.org/files/ENCFF462AZY/@@download/ENCFF462AZY.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF321RTR bed narrowPeak conservative idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF059LBQ, ENCFF134OWN, ENCFF789DUE 73953 ENCODE Processing Pipeline dc65968bffa8e7abe16da8ab14e999d1 https://www.encodeproject.org/files/ENCFF321RTR/@@download/ENCFF321RTR.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF134OWN bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF160VXC, ENCFF521MJN, ENCFF719JNQ, ENCFF834TUP 7369817 ENCODE Processing Pipeline a6b3812bc035338f05a99e996dc4b4c6 https://www.encodeproject.org/files/ENCFF134OWN/@@download/ENCFF134OWN.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF644WLI bed narrowPeak optimal idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF059LBQ, ENCFF134OWN, ENCFF789DUE 740515 ENCODE Processing Pipeline 4a0a8623e3cb7340dd9ced9610ab18e2 https://www.encodeproject.org/files/ENCFF644WLI/@@download/ENCFF644WLI.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF059LBQ bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF521MJN, ENCFF834TUP 7254816 ENCODE Processing Pipeline 308d63dee50ea770d3a9870c122a6492 https://www.encodeproject.org/files/ENCFF059LBQ/@@download/ENCFF059LBQ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF789DUE bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF719JNQ, ENCFF834TUP 7334096 ENCODE Processing Pipeline dc8ca93624ffa5580dd9bdb280637134 https://www.encodeproject.org/files/ENCFF789DUE/@@download/ENCFF789DUE.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF001VPB bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1157057 Michael Snyder, Stanford c4f170ccd454708a9833617832e98eda https://www.encodeproject.org/files/ENCFF001VPB/@@download/ENCFF001VPB.bed.gz hg19 archived mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF002CYJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 190993 ENCODE Consortium Analysis Working Group ff50199d757b891bf404ac2488933573 https://www.encodeproject.org/files/ENCFF002CYJ/@@download/ENCFF002CYJ.bed.gz hg19 archived mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF850MTK bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF232HND, ENCFF375HMX, ENCFF710NTS 6177942 ENCODE Processing Pipeline 3ef47a2b6d104c8390e87b2833a15a91 https://www.encodeproject.org/files/ENCFF850MTK/@@download/ENCFF850MTK.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF676HRI bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF375HMX, ENCFF710NTS 5153956 ENCODE Processing Pipeline 8d4df699854aa4528b138d46b01e6f27 https://www.encodeproject.org/files/ENCFF676HRI/@@download/ENCFF676HRI.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF205BAR bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF232HND, ENCFF710NTS 5205295 ENCODE Processing Pipeline 0668bcb1f596df50e9193d8ba5c90e50 https://www.encodeproject.org/files/ENCFF205BAR/@@download/ENCFF205BAR.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF626MVT bed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF205BAR, ENCFF676HRI, ENCFF850MTK 276959 ENCODE Processing Pipeline 2431f6463d18398443482deaf2effc00 https://www.encodeproject.org/files/ENCFF626MVT/@@download/ENCFF626MVT.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF823JUG bed narrowPeak conservative idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF205BAR, ENCFF676HRI, ENCFF850MTK 253500 ENCODE Processing Pipeline 857c0f6ad4a05f14a3198a73d5d69eb9 https://www.encodeproject.org/files/ENCFF823JUG/@@download/ENCFF823JUG.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF400AUH bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF188QGH 5179889 ENCODE Processing Pipeline 64651123ac68cdda4ccd879a59b7a88c https://www.encodeproject.org/files/ENCFF400AUH/@@download/ENCFF400AUH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF992BIU bed narrowPeak conservative idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF400AUH, ENCFF417VTJ, ENCFF419RSJ, ENCFF487WEO 255392 ENCODE Processing Pipeline 4a6121d29f763e2669f6f26fd10cc0fc https://www.encodeproject.org/files/ENCFF992BIU/@@download/ENCFF992BIU.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF487WEO bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF188QGH, ENCFF719NDH 6159793 ENCODE Processing Pipeline 4165e7a04706d12b67cde4429c706821 https://www.encodeproject.org/files/ENCFF487WEO/@@download/ENCFF487WEO.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF417VTJ bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF719NDH 5148978 ENCODE Processing Pipeline b99fda23e3d932f7df6eca9baa7d036e https://www.encodeproject.org/files/ENCFF417VTJ/@@download/ENCFF417VTJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF868SWL bed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF400AUH, ENCFF417VTJ, ENCFF419RSJ, ENCFF487WEO 275587 ENCODE Processing Pipeline 36c7bcbb729dc172e1cf6fbe7620a435 https://www.encodeproject.org/files/ENCFF868SWL/@@download/ENCFF868SWL.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF001VMZ bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1633362 Michael Snyder, Stanford e3fee0039ab77f91306e2853aafa3005 https://www.encodeproject.org/files/ENCFF001VMZ/@@download/ENCFF001VMZ.bed.gz hg19 archived mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF002CWL bed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1125159 ENCODE Consortium Analysis Working Group 7c774d345a596a6b268fcab76040507a https://www.encodeproject.org/files/ENCFF002CWL/@@download/ENCFF002CWL.bed.gz hg19 archived mild to moderate bottlenecking, low read length missing derived_from, biological replicates with identical biosample ENCFF973WXW bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF488CXC 4799039 ENCODE Processing Pipeline bc4273f7f883ff050b00b56cb922128e https://www.encodeproject.org/files/ENCFF973WXW/@@download/ENCFF973WXW.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF694KDC bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF198CVB 4688825 ENCODE Processing Pipeline fb2ecaaa5017a77872fc0855a617f2bd https://www.encodeproject.org/files/ENCFF694KDC/@@download/ENCFF694KDC.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF175EOP bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF198CVB, ENCFF488CXC 4501560 ENCODE Processing Pipeline 71a317358eef60f6d10dee652ae6db7b https://www.encodeproject.org/files/ENCFF175EOP/@@download/ENCFF175EOP.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF041ODC bed narrowPeak conservative idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF175EOP, ENCFF419RSJ, ENCFF694KDC, ENCFF973WXW 870798 ENCODE Processing Pipeline 0685e5699688caba74c62ee3c87090a9 https://www.encodeproject.org/files/ENCFF041ODC/@@download/ENCFF041ODC.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF396BZQ bed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF175EOP, ENCFF419RSJ, ENCFF694KDC, ENCFF973WXW 912199 ENCODE Processing Pipeline ec6d58713b0306f762dbc4cab091df71 https://www.encodeproject.org/files/ENCFF396BZQ/@@download/ENCFF396BZQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF545EHA bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF496SZR, ENCFF710NTS 4817312 ENCODE Processing Pipeline f537e875ce6fc4c5e3a7015a07e63207 https://www.encodeproject.org/files/ENCFF545EHA/@@download/ENCFF545EHA.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF264LXL bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF487UYG, ENCFF496SZR, ENCFF710NTS 4182075 ENCODE Processing Pipeline d37764996284c4fb0667c44061e5406b https://www.encodeproject.org/files/ENCFF264LXL/@@download/ENCFF264LXL.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF559HEE bed narrowPeak conservative idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF264LXL, ENCFF545EHA, ENCFF595QHF 866636 ENCODE Processing Pipeline 3f577d118c3c2ae7f868e48972c1ff26 https://www.encodeproject.org/files/ENCFF559HEE/@@download/ENCFF559HEE.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF738TKN bed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF264LXL, ENCFF545EHA, ENCFF595QHF 905102 ENCODE Processing Pipeline 8635b84f3c5785702257302d4b4b8f8a https://www.encodeproject.org/files/ENCFF738TKN/@@download/ENCFF738TKN.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF595QHF bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF487UYG, ENCFF710NTS 4688230 ENCODE Processing Pipeline be40a763bd65492b830c3cf768a541ad https://www.encodeproject.org/files/ENCFF595QHF/@@download/ENCFF595QHF.bed.gz hg19 released mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF074FFL bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF406KFP, ENCFF581ZJL, ENCFF686HTQ 7065052 ENCODE Processing Pipeline 1e856749a0963af3924232f5d1184597 https://www.encodeproject.org/files/ENCFF074FFL/@@download/ENCFF074FFL.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF888AZU bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF406KFP, ENCFF581ZJL 6893480 ENCODE Processing Pipeline aa22323020872da6f25c0326969b9c18 https://www.encodeproject.org/files/ENCFF888AZU/@@download/ENCFF888AZU.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF810MGC bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF686HTQ 6915987 ENCODE Processing Pipeline a3c8fdc3ddfd955a8ff0e3dc31180d4d https://www.encodeproject.org/files/ENCFF810MGC/@@download/ENCFF810MGC.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF562JDH bed narrowPeak optimal idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF074FFL, ENCFF810MGC, ENCFF888AZU 563260 ENCODE Processing Pipeline cc91f30f2f516fcd7c689ded645811d5 https://www.encodeproject.org/files/ENCFF562JDH/@@download/ENCFF562JDH.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF631IAC bed narrowPeak conservative idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF074FFL, ENCFF810MGC, ENCFF888AZU 405112 ENCODE Processing Pipeline 22a606470a5877124d50fd35f51ee691 https://www.encodeproject.org/files/ENCFF631IAC/@@download/ENCFF631IAC.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF448UGC bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF408BKE, ENCFF910IKB 6937384 ENCODE Processing Pipeline 8d7198842a1abe38f33967945463a336 https://www.encodeproject.org/files/ENCFF448UGC/@@download/ENCFF448UGC.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF999UMW bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF497GOO 6857449 ENCODE Processing Pipeline f31689d7850c5ab8fe50560f2aae4de4 https://www.encodeproject.org/files/ENCFF999UMW/@@download/ENCFF999UMW.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF735PXM bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF227IZS, ENCFF408BKE, ENCFF497GOO, ENCFF910IKB 7064525 ENCODE Processing Pipeline 9dc258f89fc7c332df95b2f3e14fe41c https://www.encodeproject.org/files/ENCFF735PXM/@@download/ENCFF735PXM.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF672AGD bed narrowPeak conservative idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF448UGC, ENCFF735PXM, ENCFF999UMW 399564 ENCODE Processing Pipeline e3390556316cb513ab9a4eca8f0f5191 https://www.encodeproject.org/files/ENCFF672AGD/@@download/ENCFF672AGD.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF618YRQ bed narrowPeak optimal idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF448UGC, ENCFF735PXM, ENCFF999UMW 559567 ENCODE Processing Pipeline 4874fe372a32dd38b068561e6343a8b0 https://www.encodeproject.org/files/ENCFF618YRQ/@@download/ENCFF618YRQ.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF724DTR bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF108SDD 6901725 ENCODE Processing Pipeline 7c41264509610d4941bd8759027abbf5 https://www.encodeproject.org/files/ENCFF724DTR/@@download/ENCFF724DTR.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF532BNS bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF928JGK 6785115 ENCODE Processing Pipeline 7f9a2ad7d8e3dda51b9785da719d52da https://www.encodeproject.org/files/ENCFF532BNS/@@download/ENCFF532BNS.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF776GYC bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF108SDD, ENCFF928JGK 7247466 ENCODE Processing Pipeline cea8c8b2355862e17df25703e2c6b959 https://www.encodeproject.org/files/ENCFF776GYC/@@download/ENCFF776GYC.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF805MAQ bed narrowPeak conservative idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF419RSJ, ENCFF532BNS, ENCFF724DTR, ENCFF776GYC 148058 ENCODE Processing Pipeline ac2f0694d1ab02bcf6beefcc7853aea6 https://www.encodeproject.org/files/ENCFF805MAQ/@@download/ENCFF805MAQ.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF447FIO bed narrowPeak optimal idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF419RSJ, ENCFF532BNS, ENCFF724DTR, ENCFF776GYC 216862 ENCODE Processing Pipeline 94c5616daeacc3b7d0b525da033c9f7a https://www.encodeproject.org/files/ENCFF447FIO/@@download/ENCFF447FIO.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF011UZZ bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF367QVT, ENCFF581ZJL 6897052 ENCODE Processing Pipeline 75f43cabef1cec46da521df4ee68fd85 https://www.encodeproject.org/files/ENCFF011UZZ/@@download/ENCFF011UZZ.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF071HZE bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF051LWI, ENCFF367QVT, ENCFF518IYV, ENCFF581ZJL 7246665 ENCODE Processing Pipeline 8d61e3167b86dd42914539aae5dd80fe https://www.encodeproject.org/files/ENCFF071HZE/@@download/ENCFF071HZE.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF521JOW bed narrowPeak conservative idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF001TDO, ENCFF011UZZ, ENCFF071HZE, ENCFF652WXC 146916 ENCODE Processing Pipeline e6a7061337af685721735a2231aaa57e https://www.encodeproject.org/files/ENCFF521JOW/@@download/ENCFF521JOW.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF652WXC bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF051LWI, ENCFF518IYV 6775311 ENCODE Processing Pipeline 255864953a6693c48e10c5c5811564d7 https://www.encodeproject.org/files/ENCFF652WXC/@@download/ENCFF652WXC.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF507MGL bed narrowPeak optimal idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF001TDO, ENCFF011UZZ, ENCFF071HZE, ENCFF652WXC 214239 ENCODE Processing Pipeline 5840c9b0b65a89375f82d3cdf94ec1f5 https://www.encodeproject.org/files/ENCFF507MGL/@@download/ENCFF507MGL.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF101SDV bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF167RGS, ENCFF581ZJL, ENCFF689KTQ 7178040 ENCODE Processing Pipeline 0de4c28ddb2b43817cc84236be2e66a4 https://www.encodeproject.org/files/ENCFF101SDV/@@download/ENCFF101SDV.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF524RDY bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF167RGS, ENCFF581ZJL 6933055 ENCODE Processing Pipeline 1c3305645ee0244fa7084996518070cd https://www.encodeproject.org/files/ENCFF524RDY/@@download/ENCFF524RDY.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF333ULN bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF689KTQ 7069411 ENCODE Processing Pipeline 038820ec11df6d6781de8da33e8ea384 https://www.encodeproject.org/files/ENCFF333ULN/@@download/ENCFF333ULN.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF909RRT bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF035CJB, ENCFF910IKB 6826961 ENCODE Processing Pipeline 7b33c6ed24b61d7cb79c779745ba4ed9 https://www.encodeproject.org/files/ENCFF909RRT/@@download/ENCFF909RRT.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF183XMA bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF754GYS 6960087 ENCODE Processing Pipeline e01d68b420ab4baec07c47906baebf4c https://www.encodeproject.org/files/ENCFF183XMA/@@download/ENCFF183XMA.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF431YFN bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF035CJB, ENCFF227IZS, ENCFF754GYS, ENCFF910IKB 7199473 ENCODE Processing Pipeline 464d6f1b6c3388a9855f2c5a85bce639 https://www.encodeproject.org/files/ENCFF431YFN/@@download/ENCFF431YFN.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF892BNB bed narrowPeak conservative idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF183XMA, ENCFF419RSJ, ENCFF431YFN, ENCFF909RRT 393806 ENCODE Processing Pipeline 1b84e4fb556284f763450540a0fd441d https://www.encodeproject.org/files/ENCFF892BNB/@@download/ENCFF892BNB.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF808NWU bed narrowPeak optimal idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF183XMA, ENCFF419RSJ, ENCFF431YFN, ENCFF909RRT 494804 ENCODE Processing Pipeline 091147fb85557ce881ed563fdad1fcbd https://www.encodeproject.org/files/ENCFF808NWU/@@download/ENCFF808NWU.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF132ZXL bed narrowPeak conservative idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF101SDV, ENCFF333ULN, ENCFF524RDY 339125 ENCODE Processing Pipeline 44eca35ec4dc43390bc8312b6bec294c https://www.encodeproject.org/files/ENCFF132ZXL/@@download/ENCFF132ZXL.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF076IFG bed narrowPeak optimal idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF101SDV, ENCFF333ULN, ENCFF524RDY 429072 ENCODE Processing Pipeline 2685a6bf489be07bdc3b2f2d29d997cd https://www.encodeproject.org/files/ENCFF076IFG/@@download/ENCFF076IFG.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF001VPQ bed narrowPeak peaks ENCSR000EFQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 862896 Michael Snyder, Stanford 19d2b7ddc8ef34d60def3494ebc4311e https://www.encodeproject.org/files/ENCFF001VPQ/@@download/ENCFF001VPQ.bed.gz hg19 archived low read depth, low read length missing derived_from, biological replicates with identical biosample ENCFF725PEY bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF357FKU, ENCFF581ZJL, ENCFF791XQO 7262863 ENCODE Processing Pipeline 54ba1f98062c391f062ccdd5e1d221a1 https://www.encodeproject.org/files/ENCFF725PEY/@@download/ENCFF725PEY.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF813JVU bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF791XQO 6793802 ENCODE Processing Pipeline f2494b346b270c93b3bc1584d8375fab https://www.encodeproject.org/files/ENCFF813JVU/@@download/ENCFF813JVU.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF883ZAE bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF357FKU, ENCFF581ZJL 6932385 ENCODE Processing Pipeline 973b8e66a7e34eae1cbfafbd7b88fd0a https://www.encodeproject.org/files/ENCFF883ZAE/@@download/ENCFF883ZAE.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF925NTW bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF784MTZ 6823064 ENCODE Processing Pipeline 89be9e45d1bbc045ef667766bc21a48e https://www.encodeproject.org/files/ENCFF925NTW/@@download/ENCFF925NTW.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF009QBO bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF477CYZ 6680199 ENCODE Processing Pipeline 388f40761313b2cfc884ce6ceb5cfcb4 https://www.encodeproject.org/files/ENCFF009QBO/@@download/ENCFF009QBO.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF334KUA bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF477CYZ, ENCFF784MTZ 7205587 ENCODE Processing Pipeline f439a70db82dc7eb70f8b4a1a5af42fb https://www.encodeproject.org/files/ENCFF334KUA/@@download/ENCFF334KUA.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF667LOH bed narrowPeak conservative idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF009QBO, ENCFF334KUA, ENCFF419RSJ, ENCFF925NTW 239726 ENCODE Processing Pipeline a8854b3a59c290552fedc6d254ca85fb https://www.encodeproject.org/files/ENCFF667LOH/@@download/ENCFF667LOH.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF617ZLL bed narrowPeak optimal idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF009QBO, ENCFF334KUA, ENCFF419RSJ, ENCFF925NTW 307664 ENCODE Processing Pipeline 7acca57727469981d879609a9141e3af https://www.encodeproject.org/files/ENCFF617ZLL/@@download/ENCFF617ZLL.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF067ZUO bed narrowPeak conservative idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF725PEY, ENCFF813JVU, ENCFF883ZAE 210435 ENCODE Processing Pipeline a9fea1f3a6f7a66e764e52804a09f322 https://www.encodeproject.org/files/ENCFF067ZUO/@@download/ENCFF067ZUO.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF392MUM bed narrowPeak optimal idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF725PEY, ENCFF813JVU, ENCFF883ZAE 271048 ENCODE Processing Pipeline feec5c83ee0073bfeead5b1f269e553f https://www.encodeproject.org/files/ENCFF392MUM/@@download/ENCFF392MUM.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF116JZW bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF686NWE 6978919 ENCODE Processing Pipeline cf5c9590a33d846f803d14df40f54a91 https://www.encodeproject.org/files/ENCFF116JZW/@@download/ENCFF116JZW.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF267RGU bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541OZF, ENCFF581ZJL 7085717 ENCODE Processing Pipeline 86e12d6a6279d291ed62cc05f1c9411f https://www.encodeproject.org/files/ENCFF267RGU/@@download/ENCFF267RGU.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF876EHZ bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541OZF, ENCFF581ZJL, ENCFF686NWE 7253211 ENCODE Processing Pipeline 0457be4dfc44cdc4dccdf0556f3d019e https://www.encodeproject.org/files/ENCFF876EHZ/@@download/ENCFF876EHZ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF221OAM bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF268CBK, ENCFF910IKB 7009064 ENCODE Processing Pipeline 448a39b077d4513658bfda7f2c220251 https://www.encodeproject.org/files/ENCFF221OAM/@@download/ENCFF221OAM.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF465GUK bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF253JTJ, ENCFF910IKB 6975145 ENCODE Processing Pipeline 6b0fd18b95b306edf1053d274b8ad807 https://www.encodeproject.org/files/ENCFF465GUK/@@download/ENCFF465GUK.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF290ESJ bed narrowPeak optimal idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF048BGI, ENCFF221OAM, ENCFF419RSJ, ENCFF465GUK 861777 ENCODE Processing Pipeline cda2eb3701a3c2cf983119e3cb16ca41 https://www.encodeproject.org/files/ENCFF290ESJ/@@download/ENCFF290ESJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF048BGI bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF253JTJ, ENCFF268CBK, ENCFF910IKB 7225529 ENCODE Processing Pipeline 773ddfa0d6425cd17e06bb3dcf5d3dbf https://www.encodeproject.org/files/ENCFF048BGI/@@download/ENCFF048BGI.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF418BWE bed narrowPeak conservative idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF048BGI, ENCFF221OAM, ENCFF419RSJ, ENCFF465GUK 634000 ENCODE Processing Pipeline 9e0cb2424df83a5fd404c4d65397f4a8 https://www.encodeproject.org/files/ENCFF418BWE/@@download/ENCFF418BWE.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF120MVT bed narrowPeak conservative idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF116JZW, ENCFF267RGU, ENCFF876EHZ 572629 ENCODE Processing Pipeline d95b5bae8dbbcd87ca390a6b07ccfc8b https://www.encodeproject.org/files/ENCFF120MVT/@@download/ENCFF120MVT.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF895QLA bed narrowPeak optimal idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF116JZW, ENCFF267RGU, ENCFF876EHZ 767264 ENCODE Processing Pipeline 566a637ff871d08a8eb27aa1153826fb https://www.encodeproject.org/files/ENCFF895QLA/@@download/ENCFF895QLA.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF839WLX bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF581ZJL, ENCFF607LWB 7182624 ENCODE Processing Pipeline 7cdf0e768ab4a89b9f8bb35087b49d87 https://www.encodeproject.org/files/ENCFF839WLX/@@download/ENCFF839WLX.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF622WDZ bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF473GDU 7079040 ENCODE Processing Pipeline 817b2387e09c000d8bee229f9933df2a https://www.encodeproject.org/files/ENCFF622WDZ/@@download/ENCFF622WDZ.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF701XIM bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF473GDU, ENCFF581ZJL, ENCFF607LWB 7237550 ENCODE Processing Pipeline fba6edeb7e7d91994bddf1b275cf4b58 https://www.encodeproject.org/files/ENCFF701XIM/@@download/ENCFF701XIM.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF171AYO bed narrowPeak conservative idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF622WDZ, ENCFF701XIM, ENCFF839WLX 113454 ENCODE Processing Pipeline fb45c2e070852523b4f8759e606b924f https://www.encodeproject.org/files/ENCFF171AYO/@@download/ENCFF171AYO.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF197YHU bed narrowPeak optimal idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF622WDZ, ENCFF701XIM, ENCFF839WLX 578376 ENCODE Processing Pipeline 23f1dd4b6ba4d0826d8a51cdd0b8657d https://www.encodeproject.org/files/ENCFF197YHU/@@download/ENCFF197YHU.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF222FIP bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF606LUD 7141425 ENCODE Processing Pipeline da265fd2a97bacb94e50ce735073ae87 https://www.encodeproject.org/files/ENCFF222FIP/@@download/ENCFF222FIP.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF572UYY bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF157HYJ 6950714 ENCODE Processing Pipeline 0d87bbf3d5056b5b4b865ac94e18bb79 https://www.encodeproject.org/files/ENCFF572UYY/@@download/ENCFF572UYY.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF968DGA bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF157HYJ, ENCFF606LUD 7242349 ENCODE Processing Pipeline e89d7e0e4007cbd4dc79307de27d8ffd https://www.encodeproject.org/files/ENCFF968DGA/@@download/ENCFF968DGA.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF300RMI bed narrowPeak conservative idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF222FIP, ENCFF419RSJ, ENCFF572UYY, ENCFF968DGA 110231 ENCODE Processing Pipeline 137c77d7e8efb2d6eda11897d6002c90 https://www.encodeproject.org/files/ENCFF300RMI/@@download/ENCFF300RMI.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF361RWX bed narrowPeak optimal idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF222FIP, ENCFF419RSJ, ENCFF572UYY, ENCFF968DGA 465677 ENCODE Processing Pipeline b1f87d1b831be06b49195b578bc64bbc https://www.encodeproject.org/files/ENCFF361RWX/@@download/ENCFF361RWX.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance missing unfiltered alignments ENCFF869FII bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF494OJC 6941106 ENCODE Processing Pipeline 361afd2fa5e03ad6915e779742d5bfb4 https://www.encodeproject.org/files/ENCFF869FII/@@download/ENCFF869FII.bed.gz GRCh38 released missing unfiltered alignments ENCFF726HXU bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF494OJC, ENCFF636IGK, ENCFF910IKB 7031917 ENCODE Processing Pipeline 934fef71495b6b0afc0c97a4ece6b7f5 https://www.encodeproject.org/files/ENCFF726HXU/@@download/ENCFF726HXU.bed.gz GRCh38 released missing unfiltered alignments ENCFF700WGW bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF636IGK, ENCFF910IKB 7007895 ENCODE Processing Pipeline 7c0956da2de099e0a3f9eccd1c04f481 https://www.encodeproject.org/files/ENCFF700WGW/@@download/ENCFF700WGW.bed.gz GRCh38 released missing unfiltered alignments ENCFF804ARW bed narrowPeak conservative idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF700WGW, ENCFF726HXU, ENCFF869FII 721962 ENCODE Processing Pipeline 2ee5336f432bfb83f545595ff44fd506 https://www.encodeproject.org/files/ENCFF804ARW/@@download/ENCFF804ARW.bed.gz GRCh38 released missing unfiltered alignments ENCFF062VBB bed narrowPeak optimal idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF700WGW, ENCFF726HXU, ENCFF869FII 887713 ENCODE Processing Pipeline bf16b0269116a4fa4b389df05237843a https://www.encodeproject.org/files/ENCFF062VBB/@@download/ENCFF062VBB.bed.gz GRCh38 released missing unfiltered alignments ENCFF572VXK bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF394VWK, ENCFF581ZJL 7033899 ENCODE Processing Pipeline c0d6060bab366f6158b69de0f02afd5e https://www.encodeproject.org/files/ENCFF572VXK/@@download/ENCFF572VXK.bed.gz hg19 released missing unfiltered alignments ENCFF279KYF bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF133FDG 7001273 ENCODE Processing Pipeline cd2c87ab7d899cbebf90812117c66479 https://www.encodeproject.org/files/ENCFF279KYF/@@download/ENCFF279KYF.bed.gz hg19 released missing unfiltered alignments ENCFF853VOT bed narrowPeak conservative idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF279KYF, ENCFF572VXK, ENCFF967UHQ 716202 ENCODE Processing Pipeline 97d24254d0413d7c4008e40697153a51 https://www.encodeproject.org/files/ENCFF853VOT/@@download/ENCFF853VOT.bed.gz hg19 released missing unfiltered alignments ENCFF544XKC bed narrowPeak optimal idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF279KYF, ENCFF572VXK, ENCFF967UHQ 884225 ENCODE Processing Pipeline 1be1447808c5db1b66e6c0b3f3cf0782 https://www.encodeproject.org/files/ENCFF544XKC/@@download/ENCFF544XKC.bed.gz hg19 released missing unfiltered alignments ENCFF967UHQ bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF133FDG, ENCFF394VWK, ENCFF581ZJL 6994917 ENCODE Processing Pipeline 303f660256a14fa67dff0a4001f9a0e7 https://www.encodeproject.org/files/ENCFF967UHQ/@@download/ENCFF967UHQ.bed.gz hg19 released missing unfiltered alignments ENCFF908VVI bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF350FCE, ENCFF910IKB 7006298 ENCODE Processing Pipeline d314d08440081fb1b73adc5a24b84d80 https://www.encodeproject.org/files/ENCFF908VVI/@@download/ENCFF908VVI.bed.gz GRCh38 released missing unfiltered alignments ENCFF045ANV bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF744TCZ 7062210 ENCODE Processing Pipeline d347a190a73f6fb5b2224a64bb9720d3 https://www.encodeproject.org/files/ENCFF045ANV/@@download/ENCFF045ANV.bed.gz GRCh38 released missing unfiltered alignments ENCFF680GSE bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF350FCE, ENCFF744TCZ, ENCFF910IKB 7172777 ENCODE Processing Pipeline 1b367799eb3963396e96b274e06ebf21 https://www.encodeproject.org/files/ENCFF680GSE/@@download/ENCFF680GSE.bed.gz GRCh38 released missing unfiltered alignments ENCFF333IXA bed narrowPeak conservative idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF045ANV, ENCFF419RSJ, ENCFF680GSE, ENCFF908VVI 542406 ENCODE Processing Pipeline 3a3930a6bff606bc1bac5b4bfdbcc13b https://www.encodeproject.org/files/ENCFF333IXA/@@download/ENCFF333IXA.bed.gz GRCh38 released missing unfiltered alignments ENCFF868UOJ bed narrowPeak optimal idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF045ANV, ENCFF419RSJ, ENCFF680GSE, ENCFF908VVI 721619 ENCODE Processing Pipeline 63d768a026e5098724274b19f13558e2 https://www.encodeproject.org/files/ENCFF868UOJ/@@download/ENCFF868UOJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF883TOD bed narrowPeak optimal idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF513IHI, ENCFF541RTC, ENCFF891UIQ 747434 ENCODE Processing Pipeline cec784262d95b72f7a8d5f021ea99398 https://www.encodeproject.org/files/ENCFF883TOD/@@download/ENCFF883TOD.bed.gz hg19 released missing unfiltered alignments ENCFF541RTC bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF620XKU 7097716 ENCODE Processing Pipeline e6c25db4b623fa7b1eff41e9a7ac6536 https://www.encodeproject.org/files/ENCFF541RTC/@@download/ENCFF541RTC.bed.gz hg19 released missing unfiltered alignments ENCFF513IHI bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF620XKU, ENCFF676EUR 7276138 ENCODE Processing Pipeline 832048d93b84753e18b2f10067363414 https://www.encodeproject.org/files/ENCFF513IHI/@@download/ENCFF513IHI.bed.gz hg19 released missing unfiltered alignments ENCFF891UIQ bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF676EUR 7092260 ENCODE Processing Pipeline a67287c32c3af5831e07a97dd0c47456 https://www.encodeproject.org/files/ENCFF891UIQ/@@download/ENCFF891UIQ.bed.gz hg19 released missing unfiltered alignments ENCFF670PUR bed narrowPeak conservative idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF513IHI, ENCFF541RTC, ENCFF891UIQ 573419 ENCODE Processing Pipeline 3ce2a16d13243c553c7ed86b72868a8f https://www.encodeproject.org/files/ENCFF670PUR/@@download/ENCFF670PUR.bed.gz hg19 released missing unfiltered alignments ENCFF298ANN bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF477POF, ENCFF581ZJL 6668549 ENCODE Processing Pipeline fe70ba76f997927a58faceef760078aa https://www.encodeproject.org/files/ENCFF298ANN/@@download/ENCFF298ANN.bed.gz hg19 released missing unfiltered alignments ENCFF165WWF bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF044ZGL, ENCFF477POF, ENCFF581ZJL 7146513 ENCODE Processing Pipeline b3641340d51f917d043e9927a3333d40 https://www.encodeproject.org/files/ENCFF165WWF/@@download/ENCFF165WWF.bed.gz hg19 released missing unfiltered alignments ENCFF232KWI bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF044ZGL, ENCFF581ZJL 6647154 ENCODE Processing Pipeline e5d1fa786643f62b7da74009b2bb1f10 https://www.encodeproject.org/files/ENCFF232KWI/@@download/ENCFF232KWI.bed.gz hg19 released missing unfiltered alignments ENCFF005JRY bed narrowPeak conservative idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF165WWF, ENCFF232KWI, ENCFF298ANN 23371 ENCODE Processing Pipeline c85968bec0af33dc24640b4fc9df21cc https://www.encodeproject.org/files/ENCFF005JRY/@@download/ENCFF005JRY.bed.gz hg19 released missing unfiltered alignments ENCFF278ONE bed narrowPeak optimal idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF165WWF, ENCFF232KWI, ENCFF298ANN 42864 ENCODE Processing Pipeline f001f8218fe092df94f9780e7635d9ad https://www.encodeproject.org/files/ENCFF278ONE/@@download/ENCFF278ONE.bed.gz hg19 released missing unfiltered alignments ENCFF618NEQ bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF548AHK, ENCFF910IKB 6513507 ENCODE Processing Pipeline 6093ae718a44b3866293c9d0522c3aa7 https://www.encodeproject.org/files/ENCFF618NEQ/@@download/ENCFF618NEQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF035VLB bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF548AHK, ENCFF910IKB, ENCFF995UTD 7111942 ENCODE Processing Pipeline e82224471ac284faa2ab20ce48e402a2 https://www.encodeproject.org/files/ENCFF035VLB/@@download/ENCFF035VLB.bed.gz GRCh38 released missing unfiltered alignments ENCFF240ALI bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF910IKB, ENCFF995UTD 6537629 ENCODE Processing Pipeline 66ac6d94bdf1cff5e17c256d03cc79d5 https://www.encodeproject.org/files/ENCFF240ALI/@@download/ENCFF240ALI.bed.gz GRCh38 released missing unfiltered alignments ENCFF250NHM bed narrowPeak conservative idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF035VLB, ENCFF240ALI, ENCFF419RSJ, ENCFF618NEQ 20033 ENCODE Processing Pipeline 635a90ee36c0f77beb100d2f6e9d0c15 https://www.encodeproject.org/files/ENCFF250NHM/@@download/ENCFF250NHM.bed.gz GRCh38 released missing unfiltered alignments ENCFF288ZRD bed narrowPeak optimal idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF035VLB, ENCFF240ALI, ENCFF419RSJ, ENCFF618NEQ 38961 ENCODE Processing Pipeline a857aa4b2e3800fd7500c4f91739f432 https://www.encodeproject.org/files/ENCFF288ZRD/@@download/ENCFF288ZRD.bed.gz GRCh38 released missing unfiltered alignments ENCFF698PFW bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF263MBV 6816846 ENCODE Processing Pipeline 9d9fb9b2a61fa31b2115892e3a0973a7 https://www.encodeproject.org/files/ENCFF698PFW/@@download/ENCFF698PFW.bed.gz GRCh38 released missing unfiltered alignments ENCFF350AET bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF860IRS, ENCFF910IKB 6664929 ENCODE Processing Pipeline 0abc58eb407274509ee0756648997027 https://www.encodeproject.org/files/ENCFF350AET/@@download/ENCFF350AET.bed.gz GRCh38 released missing unfiltered alignments ENCFF617JTC bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF227IZS, ENCFF263MBV, ENCFF860IRS, ENCFF910IKB 7267852 ENCODE Processing Pipeline ea204ba38af0a06568afd393be48c473 https://www.encodeproject.org/files/ENCFF617JTC/@@download/ENCFF617JTC.bed.gz GRCh38 released missing unfiltered alignments ENCFF937LGS bed narrowPeak conservative idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF350AET, ENCFF419RSJ, ENCFF617JTC, ENCFF698PFW 154306 ENCODE Processing Pipeline 10e41f35487806314be10a7bc33c89f1 https://www.encodeproject.org/files/ENCFF937LGS/@@download/ENCFF937LGS.bed.gz GRCh38 released missing unfiltered alignments ENCFF909RMQ bed narrowPeak optimal idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF350AET, ENCFF419RSJ, ENCFF617JTC, ENCFF698PFW 240056 ENCODE Processing Pipeline 15bf101d68f40346d3faec87fbca4aa1 https://www.encodeproject.org/files/ENCFF909RMQ/@@download/ENCFF909RMQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF654INX bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF581ZJL, ENCFF978JTT 6632005 ENCODE Processing Pipeline 91abe29c9a4aed1614168c0945be1519 https://www.encodeproject.org/files/ENCFF654INX/@@download/ENCFF654INX.bed.gz hg19 released missing unfiltered alignments ENCFF261XPP bed narrowPeak optimal idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF001TDO, ENCFF506ZBZ, ENCFF612BYB, ENCFF654INX 242184 ENCODE Processing Pipeline ac65d03826f780526495ec873aa0d673 https://www.encodeproject.org/files/ENCFF261XPP/@@download/ENCFF261XPP.bed.gz hg19 released missing unfiltered alignments ENCFF506ZBZ bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF770FOE 6818155 ENCODE Processing Pipeline 608eaff7ddd2e050aa1865b7cbf368e2 https://www.encodeproject.org/files/ENCFF506ZBZ/@@download/ENCFF506ZBZ.bed.gz hg19 released missing unfiltered alignments ENCFF612BYB bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF770FOE, ENCFF978JTT 7262870 ENCODE Processing Pipeline 09fd9a63d684e03969815904c0fe1c20 https://www.encodeproject.org/files/ENCFF612BYB/@@download/ENCFF612BYB.bed.gz hg19 released missing unfiltered alignments ENCFF235UZG bed narrowPeak conservative idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF001TDO, ENCFF506ZBZ, ENCFF612BYB, ENCFF654INX 153665 ENCODE Processing Pipeline 457f23bc42d399c1f2eeccd3a189a518 https://www.encodeproject.org/files/ENCFF235UZG/@@download/ENCFF235UZG.bed.gz hg19 released missing unfiltered alignments ENCFF440AAA bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF695TZQ 6578157 ENCODE Processing Pipeline a1889128d98db837709410a30eb86996 https://www.encodeproject.org/files/ENCFF440AAA/@@download/ENCFF440AAA.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF992YKP bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF525CPA 6541996 ENCODE Processing Pipeline db6221ae776c3ed906185381d4b7036d https://www.encodeproject.org/files/ENCFF992YKP/@@download/ENCFF992YKP.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF717WWT bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF525CPA, ENCFF695TZQ 7160052 ENCODE Processing Pipeline 5aa9f46949978b816c0f32a06fa1539c https://www.encodeproject.org/files/ENCFF717WWT/@@download/ENCFF717WWT.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF412EVD bed narrowPeak conservative idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF440AAA, ENCFF717WWT, ENCFF992YKP 402895 ENCODE Processing Pipeline 7c7740c265c0e8c3f8717c79afaf8e3d https://www.encodeproject.org/files/ENCFF412EVD/@@download/ENCFF412EVD.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF475LFH bed narrowPeak optimal idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF440AAA, ENCFF717WWT, ENCFF992YKP 501763 ENCODE Processing Pipeline 57a4f9c69022e7387283f16da692f152 https://www.encodeproject.org/files/ENCFF475LFH/@@download/ENCFF475LFH.bed.gz GRCh38 released mild to moderate bottlenecking missing unfiltered alignments ENCFF106RGY bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF341UEE 6541828 ENCODE Processing Pipeline e6f5f66dd80e240ea9a45a7df2ae5940 https://www.encodeproject.org/files/ENCFF106RGY/@@download/ENCFF106RGY.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF435YKY bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF341UEE, ENCFF389WLJ, ENCFF581ZJL 7138907 ENCODE Processing Pipeline ff67e223112fba5e51c5d05cf2e602ef https://www.encodeproject.org/files/ENCFF435YKY/@@download/ENCFF435YKY.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF661CJD bed narrowPeak conservative idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF106RGY, ENCFF435YKY, ENCFF808YAS 395733 ENCODE Processing Pipeline 575cd73c45f4d212b331865809bcc149 https://www.encodeproject.org/files/ENCFF661CJD/@@download/ENCFF661CJD.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF808YAS bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF389WLJ, ENCFF581ZJL 6588440 ENCODE Processing Pipeline b7d7d11be5c02c6de486c7485eeaf585 https://www.encodeproject.org/files/ENCFF808YAS/@@download/ENCFF808YAS.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF284LRP bed narrowPeak optimal idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF106RGY, ENCFF435YKY, ENCFF808YAS 490842 ENCODE Processing Pipeline 3c526cb3b4923a306e8fa5fbc8fc4dd0 https://www.encodeproject.org/files/ENCFF284LRP/@@download/ENCFF284LRP.bed.gz hg19 released mild to moderate bottlenecking missing unfiltered alignments ENCFF696NDZ bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF050ZWR, ENCFF581ZJL 6922724 ENCODE Processing Pipeline cdeff180b250f2f1f3a024f0da98ba52 https://www.encodeproject.org/files/ENCFF696NDZ/@@download/ENCFF696NDZ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF232HEV bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF842SKP 6884646 ENCODE Processing Pipeline 4416b7547a5b229856a3940d5b90c0f9 https://www.encodeproject.org/files/ENCFF232HEV/@@download/ENCFF232HEV.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF813HMN bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF050ZWR, ENCFF051LWI, ENCFF581ZJL, ENCFF842SKP 7260038 ENCODE Processing Pipeline 708edd54fcc71c29c1c51c1f0d9321f9 https://www.encodeproject.org/files/ENCFF813HMN/@@download/ENCFF813HMN.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF243MBZ bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF015UIX 6805431 ENCODE Processing Pipeline 53cb9d06b5f42fedbf17fb42e2129e74 https://www.encodeproject.org/files/ENCFF243MBZ/@@download/ENCFF243MBZ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF831GNR bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF587HZM 6823843 ENCODE Processing Pipeline 4af38959390946dc6019fbd98ba68bc3 https://www.encodeproject.org/files/ENCFF831GNR/@@download/ENCFF831GNR.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF057PDR bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF015UIX, ENCFF587HZM 7255373 ENCODE Processing Pipeline cc1aa6c8daf96c178ffdaa07f9dfeec4 https://www.encodeproject.org/files/ENCFF057PDR/@@download/ENCFF057PDR.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF966CGZ bed narrowPeak conservative idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF057PDR, ENCFF243MBZ, ENCFF419RSJ, ENCFF831GNR 101654 ENCODE Processing Pipeline 850bc8018e9d1f71532a78f51b18e468 https://www.encodeproject.org/files/ENCFF966CGZ/@@download/ENCFF966CGZ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF349MSP bed narrowPeak optimal idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF057PDR, ENCFF243MBZ, ENCFF419RSJ, ENCFF831GNR 164122 ENCODE Processing Pipeline dfb29d14928060c7b12347bbf74fedb5 https://www.encodeproject.org/files/ENCFF349MSP/@@download/ENCFF349MSP.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF539WLH bed narrowPeak optimal idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF232HEV, ENCFF696NDZ, ENCFF813HMN 128344 ENCODE Processing Pipeline 2a1c65eb617ccef1f2444da1282bf8b0 https://www.encodeproject.org/files/ENCFF539WLH/@@download/ENCFF539WLH.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF697DZC bed narrowPeak conservative idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF232HEV, ENCFF696NDZ, ENCFF813HMN 81053 ENCODE Processing Pipeline db0b6abbe2913ccc712c01c3aaa674ae https://www.encodeproject.org/files/ENCFF697DZC/@@download/ENCFF697DZC.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF625PVR bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF051LWI, ENCFF105XTZ, ENCFF581ZJL, ENCFF606YTH 7218596 ENCODE Processing Pipeline b7b93a32812f7a3a31bb504b9892b82d https://www.encodeproject.org/files/ENCFF625PVR/@@download/ENCFF625PVR.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF307JUJ bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF051LWI, ENCFF606YTH 6500043 ENCODE Processing Pipeline 5c65bc9a01516d7a56cae72f2baf034a https://www.encodeproject.org/files/ENCFF307JUJ/@@download/ENCFF307JUJ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF734SUP bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF105XTZ, ENCFF581ZJL 6729307 ENCODE Processing Pipeline 74392f29101d939774a874931fce12b7 https://www.encodeproject.org/files/ENCFF734SUP/@@download/ENCFF734SUP.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF105NCA bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF339RWU, ENCFF910IKB 6603415 ENCODE Processing Pipeline e5a4dca9eda8d57b923ef6aa6cf65d04 https://www.encodeproject.org/files/ENCFF105NCA/@@download/ENCFF105NCA.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF870UGO bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF227IZS, ENCFF958WMW 6390404 ENCODE Processing Pipeline 6e707f83fe85adc367acc96f8a61b714 https://www.encodeproject.org/files/ENCFF870UGO/@@download/ENCFF870UGO.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF114RXP bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF227IZS, ENCFF339RWU, ENCFF910IKB, ENCFF958WMW 7176379 ENCODE Processing Pipeline 5325987842ebbe8b83818280d47de0bb https://www.encodeproject.org/files/ENCFF114RXP/@@download/ENCFF114RXP.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF136UPB bed narrowPeak conservative idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF105NCA, ENCFF114RXP, ENCFF419RSJ, ENCFF870UGO 321165 ENCODE Processing Pipeline 1212b8461e51602ead61133dc7f34de9 https://www.encodeproject.org/files/ENCFF136UPB/@@download/ENCFF136UPB.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF539SXG bed narrowPeak optimal idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF105NCA, ENCFF114RXP, ENCFF419RSJ, ENCFF870UGO 372701 ENCODE Processing Pipeline 40f72df28c276c4dbe859b809f985ff0 https://www.encodeproject.org/files/ENCFF539SXG/@@download/ENCFF539SXG.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF976WHF bed narrowPeak conservative idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF307JUJ, ENCFF625PVR, ENCFF734SUP 273845 ENCODE Processing Pipeline af07b6f51bfe9fd037e268547e59f97d https://www.encodeproject.org/files/ENCFF976WHF/@@download/ENCFF976WHF.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF502KHR bed narrowPeak optimal idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF307JUJ, ENCFF625PVR, ENCFF734SUP 329872 ENCODE Processing Pipeline c2e187f6d861df3100e2acf5d12e3e45 https://www.encodeproject.org/files/ENCFF502KHR/@@download/ENCFF502KHR.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity, low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF733BAD bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF051LWI, ENCFF690CWG 6810880 ENCODE Processing Pipeline 1099a7eba7de19b93fa68046112910e4 https://www.encodeproject.org/files/ENCFF733BAD/@@download/ENCFF733BAD.bed.gz hg19 released low read depth ENCFF649STG bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF051LWI, ENCFF411PRP, ENCFF581ZJL, ENCFF690CWG 7225762 ENCODE Processing Pipeline d3445bb552d890141b649942e051b032 https://www.encodeproject.org/files/ENCFF649STG/@@download/ENCFF649STG.bed.gz hg19 released low read depth ENCFF810EAC bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF411PRP, ENCFF581ZJL 6721746 ENCODE Processing Pipeline 5cc4b114acb6825cc1974b8168d3c37e https://www.encodeproject.org/files/ENCFF810EAC/@@download/ENCFF810EAC.bed.gz hg19 released low read depth ENCFF366UBB bed narrowPeak optimal idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF649STG, ENCFF733BAD, ENCFF810EAC 523344 ENCODE Processing Pipeline b70248917b378e34aa1952f19b956f77 https://www.encodeproject.org/files/ENCFF366UBB/@@download/ENCFF366UBB.bed.gz hg19 released low read depth ENCFF098XOZ bed narrowPeak conservative idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF649STG, ENCFF733BAD, ENCFF810EAC 448046 ENCODE Processing Pipeline c4dcbcdc941c978113d733fb61f5d29c https://www.encodeproject.org/files/ENCFF098XOZ/@@download/ENCFF098XOZ.bed.gz hg19 released low read depth ENCFF512XHP bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF033JFM, ENCFF072KEJ, ENCFF227IZS, ENCFF910IKB 7127787 ENCODE Processing Pipeline 5c15ab9b57ee3c699a8398c74b74cc69 https://www.encodeproject.org/files/ENCFF512XHP/@@download/ENCFF512XHP.bed.gz GRCh38 released low read depth ENCFF917BXV bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF072KEJ, ENCFF227IZS 6704878 ENCODE Processing Pipeline 73a22a5dd8710492a27107d660700ac2 https://www.encodeproject.org/files/ENCFF917BXV/@@download/ENCFF917BXV.bed.gz GRCh38 released low read depth ENCFF150TDO bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF033JFM, ENCFF910IKB 6561010 ENCODE Processing Pipeline f3deb96da0f612c01ee43892b636aa8d https://www.encodeproject.org/files/ENCFF150TDO/@@download/ENCFF150TDO.bed.gz GRCh38 released low read depth ENCFF007ZUL bed narrowPeak optimal idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF150TDO, ENCFF419RSJ, ENCFF512XHP, ENCFF917BXV 490433 ENCODE Processing Pipeline 878253b762325dff1663e201db17803c https://www.encodeproject.org/files/ENCFF007ZUL/@@download/ENCFF007ZUL.bed.gz GRCh38 released low read depth ENCFF032MJB bed narrowPeak conservative idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF150TDO, ENCFF419RSJ, ENCFF512XHP, ENCFF917BXV 424894 ENCODE Processing Pipeline 4827f9e193c2a9aac07eea85936856e9 https://www.encodeproject.org/files/ENCFF032MJB/@@download/ENCFF032MJB.bed.gz GRCh38 released low read depth ENCFF590LRH bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF479XRX, ENCFF503YHD 7126045 ENCODE Processing Pipeline c4dd620d8cb73921a71e311ff1644875 https://www.encodeproject.org/files/ENCFF590LRH/@@download/ENCFF590LRH.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF603BTL bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF503YHD, ENCFF783CXK 7009038 ENCODE Processing Pipeline 4d3412ad428852982210ca66bd1e37a2 https://www.encodeproject.org/files/ENCFF603BTL/@@download/ENCFF603BTL.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF748XDB bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF479XRX, ENCFF503YHD, ENCFF783CXK 7269760 ENCODE Processing Pipeline c5fac7fdbbf59314cecc01c9477e6fbf https://www.encodeproject.org/files/ENCFF748XDB/@@download/ENCFF748XDB.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF827OBX bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF540ZTB, ENCFF609HLC 6920685 ENCODE Processing Pipeline 68f2d01dba737b3b6e74223ed81289de https://www.encodeproject.org/files/ENCFF827OBX/@@download/ENCFF827OBX.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF836SVL bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF609HLC, ENCFF666EIZ 7045570 ENCODE Processing Pipeline 2cc3e244bc2ab1cbd8537d2d33cf1377 https://www.encodeproject.org/files/ENCFF836SVL/@@download/ENCFF836SVL.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF295TTE bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF540ZTB, ENCFF609HLC, ENCFF666EIZ 7236886 ENCODE Processing Pipeline 7c385676ff72f84b83c12d4fad863ecb https://www.encodeproject.org/files/ENCFF295TTE/@@download/ENCFF295TTE.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF003MTQ bed narrowPeak conservative idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF295TTE, ENCFF419RSJ, ENCFF827OBX, ENCFF836SVL 393067 ENCODE Processing Pipeline 5e03d2e650a7f229a61df5ae8907700b https://www.encodeproject.org/files/ENCFF003MTQ/@@download/ENCFF003MTQ.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF817ARM bed narrowPeak optimal idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF295TTE, ENCFF419RSJ, ENCFF827OBX, ENCFF836SVL 401684 ENCODE Processing Pipeline 89c7f08b01d55a381b810fbd45dd5481 https://www.encodeproject.org/files/ENCFF817ARM/@@download/ENCFF817ARM.bed.gz GRCh38 released low read depth experiment not submitted to GEO, missing unfiltered alignments ENCFF219ZRU bed narrowPeak conservative idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF590LRH, ENCFF603BTL, ENCFF748XDB 325491 ENCODE Processing Pipeline 51e3bb743f954592f2e9b14ce8f1ef29 https://www.encodeproject.org/files/ENCFF219ZRU/@@download/ENCFF219ZRU.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched status ENCFF396GUH bed narrowPeak optimal idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF590LRH, ENCFF603BTL, ENCFF748XDB 328085 ENCODE Processing Pipeline c0f9021391f0142e862d9de195e2fccc https://www.encodeproject.org/files/ENCFF396GUH/@@download/ENCFF396GUH.bed.gz hg19 released low read depth experiment not submitted to GEO, missing unfiltered alignments, mismatched status ENCFF060XZX bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF335IPE, ENCFF833DBR 4381264 ENCODE Processing Pipeline 383e6889efb44997cec370ab5d17c325 https://www.encodeproject.org/files/ENCFF060XZX/@@download/ENCFF060XZX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF274DVQ bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF508MJP, ENCFF879OQC 4527559 ENCODE Processing Pipeline 989e63de6058c49c3266aaa1f69937d1 https://www.encodeproject.org/files/ENCFF274DVQ/@@download/ENCFF274DVQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF975NRI bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF335IPE, ENCFF508MJP, ENCFF833DBR, ENCFF879OQC 6063898 ENCODE Processing Pipeline c2192e723f27a63840455d5300ad9609 https://www.encodeproject.org/files/ENCFF975NRI/@@download/ENCFF975NRI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF635SZW bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF156FED, ENCFF425MJK 4074036 ENCODE Processing Pipeline d1fb531001e427b471b156cf928c46ae https://www.encodeproject.org/files/ENCFF635SZW/@@download/ENCFF635SZW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF364FBS bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF577FNG, ENCFF600TNR 4356080 ENCODE Processing Pipeline 8a81b1d7b8e2a5f57cbf403bdfb99da4 https://www.encodeproject.org/files/ENCFF364FBS/@@download/ENCFF364FBS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF567TSK bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF156FED, ENCFF425MJK, ENCFF577FNG, ENCFF600TNR 5779468 ENCODE Processing Pipeline 472a63529bff009c252c9bbf582eddff https://www.encodeproject.org/files/ENCFF567TSK/@@download/ENCFF567TSK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF749WKK bed narrowPeak conservative idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF364FBS, ENCFF419RSJ, ENCFF567TSK, ENCFF635SZW 32491 ENCODE Processing Pipeline 375dc0adbb26d52151bd1e9eba3e2061 https://www.encodeproject.org/files/ENCFF749WKK/@@download/ENCFF749WKK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF556FYF bed narrowPeak optimal idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF364FBS, ENCFF419RSJ, ENCFF567TSK, ENCFF635SZW 39688 ENCODE Processing Pipeline 06fd850832b427a97078af5d005d43e5 https://www.encodeproject.org/files/ENCFF556FYF/@@download/ENCFF556FYF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF205MMX bed narrowPeak conservative idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF060XZX, ENCFF274DVQ, ENCFF975NRI 28797 ENCODE Processing Pipeline b4c3930727f5f86632e6ce7ae12c7156 https://www.encodeproject.org/files/ENCFF205MMX/@@download/ENCFF205MMX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF312RFN bed narrowPeak optimal idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF060XZX, ENCFF274DVQ, ENCFF975NRI 34454 ENCODE Processing Pipeline 0d2abc09baae3bbab2319c87770d5ba6 https://www.encodeproject.org/files/ENCFF312RFN/@@download/ENCFF312RFN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing unfiltered alignments ENCFF718AFD bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF579IUE, ENCFF879OQC 5040348 ENCODE Processing Pipeline 0ce9c9477d4487d493a5e07f3bc934fb https://www.encodeproject.org/files/ENCFF718AFD/@@download/ENCFF718AFD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF791GAM bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF335IPE, ENCFF729BKM 5988481 ENCODE Processing Pipeline 99ecd27acaeac0e97bc7a7718227b136 https://www.encodeproject.org/files/ENCFF791GAM/@@download/ENCFF791GAM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF877VHC bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF335IPE, ENCFF579IUE, ENCFF729BKM, ENCFF879OQC 6859409 ENCODE Processing Pipeline d8dbb7005f5ec54696e86d6fe01e27c4 https://www.encodeproject.org/files/ENCFF877VHC/@@download/ENCFF877VHC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF006BQW bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF385PRZ, ENCFF577FNG 4825137 ENCODE Processing Pipeline 00da91069b53ab211d31f1f61e1e05d7 https://www.encodeproject.org/files/ENCFF006BQW/@@download/ENCFF006BQW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF695GOE bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF156FED, ENCFF315DZX 5798010 ENCODE Processing Pipeline e2b883bccd59f19e01b7955fd7388c77 https://www.encodeproject.org/files/ENCFF695GOE/@@download/ENCFF695GOE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF419HDS bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF156FED, ENCFF315DZX, ENCFF385PRZ, ENCFF577FNG 6734540 ENCODE Processing Pipeline ef570450c6a5057d95e592dcea641a20 https://www.encodeproject.org/files/ENCFF419HDS/@@download/ENCFF419HDS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF446MUL bed narrowPeak conservative idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF006BQW, ENCFF419HDS, ENCFF419RSJ, ENCFF695GOE 213036 ENCODE Processing Pipeline b3e1cdd432d61c6e50569e9a00aafeb3 https://www.encodeproject.org/files/ENCFF446MUL/@@download/ENCFF446MUL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF802JAN bed narrowPeak optimal idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF006BQW, ENCFF419HDS, ENCFF419RSJ, ENCFF695GOE 250513 ENCODE Processing Pipeline 24417aa4f4564a237fc97e6e33fd4e0c https://www.encodeproject.org/files/ENCFF802JAN/@@download/ENCFF802JAN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF191MPD bed narrowPeak optimal idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF718AFD, ENCFF791GAM, ENCFF877VHC 209919 ENCODE Processing Pipeline 73ff664a4d223fafe5f230e633552942 https://www.encodeproject.org/files/ENCFF191MPD/@@download/ENCFF191MPD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF435GRA bed narrowPeak conservative idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF718AFD, ENCFF791GAM, ENCFF877VHC 181213 ENCODE Processing Pipeline c2b3c97807efdbd5b9476a0dcd9c6b47 https://www.encodeproject.org/files/ENCFF435GRA/@@download/ENCFF435GRA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, moderate library complexity, low read length missing unfiltered alignments ENCFF905VIC bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF177GPP, ENCFF335IPE, ENCFF672FSO, ENCFF879OQC 6738545 ENCODE Processing Pipeline 6b75de55d0db26aa3bc12a2c6d66f215 https://www.encodeproject.org/files/ENCFF905VIC/@@download/ENCFF905VIC.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF558QUM bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF672FSO 5904108 ENCODE Processing Pipeline b80370bc9652a73cb54822a4fd3c9a3b https://www.encodeproject.org/files/ENCFF558QUM/@@download/ENCFF558QUM.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF533MTU bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF177GPP, ENCFF879OQC 4533441 ENCODE Processing Pipeline ea922578f229cf2741b1dd492b421187 https://www.encodeproject.org/files/ENCFF533MTU/@@download/ENCFF533MTU.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF694OAS bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF726AYE 5624816 ENCODE Processing Pipeline 542b62ec94b073e2b47f0aea5c2bee1d https://www.encodeproject.org/files/ENCFF694OAS/@@download/ENCFF694OAS.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF908MOD bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF880ODJ 4340622 ENCODE Processing Pipeline 7a733374cec02db3a79c657b51575f64 https://www.encodeproject.org/files/ENCFF908MOD/@@download/ENCFF908MOD.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF326CMY bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF726AYE, ENCFF880ODJ 6552272 ENCODE Processing Pipeline 177939b5b1b40e14a1170bef4ce58660 https://www.encodeproject.org/files/ENCFF326CMY/@@download/ENCFF326CMY.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF876CPX bed narrowPeak conservative idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF326CMY, ENCFF419RSJ, ENCFF694OAS, ENCFF908MOD 50145 ENCODE Processing Pipeline 4ea5f35f9ef0ebea8231a27f1ae5909e https://www.encodeproject.org/files/ENCFF876CPX/@@download/ENCFF876CPX.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF820LKT bed narrowPeak optimal idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF326CMY, ENCFF419RSJ, ENCFF694OAS, ENCFF908MOD 91248 ENCODE Processing Pipeline 222287580210015da4086a1003fa371e https://www.encodeproject.org/files/ENCFF820LKT/@@download/ENCFF820LKT.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF379WER bed narrowPeak conservative idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF533MTU, ENCFF558QUM, ENCFF905VIC 42338 ENCODE Processing Pipeline e47fc91f1c855e2d37f4de9792ce89a0 https://www.encodeproject.org/files/ENCFF379WER/@@download/ENCFF379WER.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF485MXM bed narrowPeak optimal idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF533MTU, ENCFF558QUM, ENCFF905VIC 76440 ENCODE Processing Pipeline cfb6a3095d48e09ffa9b902b0cdc7fa7 https://www.encodeproject.org/files/ENCFF485MXM/@@download/ENCFF485MXM.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF596AQS bed narrowPeak peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 1 ENCFF581ZJL, ENCFF888HAW 7003993 ENCODE Processing Pipeline 1cd4889de685903503036faedcd30fdd https://www.encodeproject.org/files/ENCFF596AQS/@@download/ENCFF596AQS.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF125FXN bed narrowPeak peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF542QPX 6566983 ENCODE Processing Pipeline 35424a6156bccfd1b340882aa72d2387 https://www.encodeproject.org/files/ENCFF125FXN/@@download/ENCFF125FXN.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF245HDG bed narrowPeak peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF542QPX, ENCFF581ZJL, ENCFF888HAW 7271360 ENCODE Processing Pipeline 9c13a76e11b567810066214518c94b9f https://www.encodeproject.org/files/ENCFF245HDG/@@download/ENCFF245HDG.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF991PHJ bed narrowPeak conservative idr thresholded peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF125FXN, ENCFF245HDG, ENCFF596AQS 89659 ENCODE Processing Pipeline 0aad3a653b0d76278a9e2e4ec08df5b2 https://www.encodeproject.org/files/ENCFF991PHJ/@@download/ENCFF991PHJ.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF511OXK bed narrowPeak optimal idr thresholded peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF125FXN, ENCFF245HDG, ENCFF596AQS 182723 ENCODE Processing Pipeline 7cad7dbd4340dfba2b5fa7f17060ae98 https://www.encodeproject.org/files/ENCFF511OXK/@@download/ENCFF511OXK.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF880PHH bed narrowPeak peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 1, 2 ENCFF076WTJ, ENCFF518GJM 7266573 ENCODE Processing Pipeline cc8a0edd56d334a47b2839d9ad222a5a https://www.encodeproject.org/files/ENCFF880PHH/@@download/ENCFF880PHH.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF780DXP bed narrowPeak peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 1 ENCFF518GJM 6929369 ENCODE Processing Pipeline 9bd31fc9fe2133b9b5d4dd8bc7bac19d https://www.encodeproject.org/files/ENCFF780DXP/@@download/ENCFF780DXP.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF036VQP bed narrowPeak peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 2 ENCFF076WTJ 6436012 ENCODE Processing Pipeline d10cf0cd6ed30b237479bfe92f48f1ed https://www.encodeproject.org/files/ENCFF036VQP/@@download/ENCFF036VQP.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF752ETB bed narrowPeak conservative idr thresholded peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 1, 2 ENCFF036VQP, ENCFF419RSJ, ENCFF780DXP, ENCFF880PHH 88551 ENCODE Processing Pipeline e0ab50d5736cb5567b863019950de49b https://www.encodeproject.org/files/ENCFF752ETB/@@download/ENCFF752ETB.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF668ZTJ bed narrowPeak optimal idr thresholded peaks ENCSR288MOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens LARP7-human ENCAB568DRS DNA False 2016-09-01 ENCODE 1, 2 ENCFF036VQP, ENCFF419RSJ, ENCFF780DXP, ENCFF880PHH 189607 ENCODE Processing Pipeline 6d9ee84f162d871b9fe2541c95420e2f https://www.encodeproject.org/files/ENCFF668ZTJ/@@download/ENCFF668ZTJ.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF008XTO bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF581ZJL, ENCFF862UZN 6606736 ENCODE Processing Pipeline f35483d19c4445bdeed1b505251a418e https://www.encodeproject.org/files/ENCFF008XTO/@@download/ENCFF008XTO.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF830YCS bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF051LWI, ENCFF080MNK 6824938 ENCODE Processing Pipeline 1f26fecef2e02649484455fc3cc1772f https://www.encodeproject.org/files/ENCFF830YCS/@@download/ENCFF830YCS.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF811RGP bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF051LWI, ENCFF080MNK, ENCFF581ZJL, ENCFF862UZN 7183477 ENCODE Processing Pipeline de10bf4b5542e94981e07d5156011e3b https://www.encodeproject.org/files/ENCFF811RGP/@@download/ENCFF811RGP.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF097OOH bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF871KNP 6498924 ENCODE Processing Pipeline cf88dee06d156cccad7e33a003b5c7b0 https://www.encodeproject.org/files/ENCFF097OOH/@@download/ENCFF097OOH.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF276DDZ bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF490ICL 6693668 ENCODE Processing Pipeline 0f21f5e7ff1602801567634053e61590 https://www.encodeproject.org/files/ENCFF276DDZ/@@download/ENCFF276DDZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF482TTM bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF490ICL, ENCFF871KNP 7156825 ENCODE Processing Pipeline 9fa2a5ce4ce8c130036e12dd24f8d1c6 https://www.encodeproject.org/files/ENCFF482TTM/@@download/ENCFF482TTM.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF951EDR bed narrowPeak conservative idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF097OOH, ENCFF276DDZ, ENCFF419RSJ, ENCFF482TTM 312211 ENCODE Processing Pipeline def0445013b104e6d0cb84dfd757c1c3 https://www.encodeproject.org/files/ENCFF951EDR/@@download/ENCFF951EDR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF905GXS bed narrowPeak optimal idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF097OOH, ENCFF276DDZ, ENCFF419RSJ, ENCFF482TTM 336627 ENCODE Processing Pipeline f9cf1c77884bac03869a5b8f336e1ac2 https://www.encodeproject.org/files/ENCFF905GXS/@@download/ENCFF905GXS.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF934JXG bed narrowPeak conservative idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF008XTO, ENCFF811RGP, ENCFF830YCS 275981 ENCODE Processing Pipeline cccc8f6c4b7f9ac00b6a7c6dd18431df https://www.encodeproject.org/files/ENCFF934JXG/@@download/ENCFF934JXG.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF237UAN bed narrowPeak optimal idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF008XTO, ENCFF811RGP, ENCFF830YCS 297362 ENCODE Processing Pipeline cf2d85601c8811ad39574a73908395c8 https://www.encodeproject.org/files/ENCFF237UAN/@@download/ENCFF237UAN.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF908JEV bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF133ZYE, ENCFF754ZXY 6500240 ENCODE Processing Pipeline 70b159f8f15ea265f6041673fefe95e3 https://www.encodeproject.org/files/ENCFF908JEV/@@download/ENCFF908JEV.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF040CEH bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF323PVX, ENCFF754ZXY 6561709 ENCODE Processing Pipeline bce420b248bca27e98b833b8038a3721 https://www.encodeproject.org/files/ENCFF040CEH/@@download/ENCFF040CEH.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF205LAU bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF133ZYE, ENCFF323PVX, ENCFF754ZXY 7051178 ENCODE Processing Pipeline 6570c5867feab057e5b6b595bcdafa55 https://www.encodeproject.org/files/ENCFF205LAU/@@download/ENCFF205LAU.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF061LHW bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF321YGO, ENCFF398UYF 6356677 ENCODE Processing Pipeline f3c07592e6c320e6d26ce5944b09d387 https://www.encodeproject.org/files/ENCFF061LHW/@@download/ENCFF061LHW.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF528UAD bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF227TEG, ENCFF321YGO 6404704 ENCODE Processing Pipeline 3bb9e6793cea75259ed205c93f2ceafe https://www.encodeproject.org/files/ENCFF528UAD/@@download/ENCFF528UAD.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF153AXV bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF227TEG, ENCFF321YGO, ENCFF398UYF 6952064 ENCODE Processing Pipeline 45b6f69cf629eb6ff4ab6f509feea49e https://www.encodeproject.org/files/ENCFF153AXV/@@download/ENCFF153AXV.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF168PYI bed narrowPeak optimal idr thresholded peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF061LHW, ENCFF153AXV, ENCFF419RSJ, ENCFF528UAD 484763 ENCODE Processing Pipeline 211b66d0c8bb0ae5a04fb5856233f719 https://www.encodeproject.org/files/ENCFF168PYI/@@download/ENCFF168PYI.bed.gz GRCh38 released experiment not submitted to GEO, missing unfiltered alignments ENCFF248AOD bed narrowPeak optimal idr thresholded peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF040CEH, ENCFF205LAU, ENCFF908JEV 405344 ENCODE Processing Pipeline 2b29bf3d96987a1477ec6855a06b7040 https://www.encodeproject.org/files/ENCFF248AOD/@@download/ENCFF248AOD.bed.gz hg19 released experiment not submitted to GEO, missing unfiltered alignments ENCFF944TDV bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF131XTL, ENCFF910IKB 6644453 ENCODE Processing Pipeline 12d561d0a8581e2249aca22a13713e2e https://www.encodeproject.org/files/ENCFF944TDV/@@download/ENCFF944TDV.bed.gz GRCh38 released missing unfiltered alignments ENCFF137YWA bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF353XMB 6345252 ENCODE Processing Pipeline 215344f8d95ab198099232c60c721b8a https://www.encodeproject.org/files/ENCFF137YWA/@@download/ENCFF137YWA.bed.gz GRCh38 released missing unfiltered alignments ENCFF998NLN bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF131XTL, ENCFF227IZS, ENCFF353XMB, ENCFF910IKB 7226040 ENCODE Processing Pipeline 55d2deb88aed77ed1f3ef9748bf3d17a https://www.encodeproject.org/files/ENCFF998NLN/@@download/ENCFF998NLN.bed.gz GRCh38 released missing unfiltered alignments ENCFF745CJF bed narrowPeak conservative idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF137YWA, ENCFF419RSJ, ENCFF944TDV, ENCFF998NLN 167041 ENCODE Processing Pipeline 1c2c00bf18bf71714844a3bb37a62d92 https://www.encodeproject.org/files/ENCFF745CJF/@@download/ENCFF745CJF.bed.gz GRCh38 released missing unfiltered alignments ENCFF388LUX bed narrowPeak optimal idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF137YWA, ENCFF419RSJ, ENCFF944TDV, ENCFF998NLN 249289 ENCODE Processing Pipeline 2bd8969d70f944c99a46017e037274a6 https://www.encodeproject.org/files/ENCFF388LUX/@@download/ENCFF388LUX.bed.gz GRCh38 released missing unfiltered alignments ENCFF057GKG bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF821TOA 6650101 ENCODE Processing Pipeline c685a5d1d610d6d4d42b6e64e6cba59b https://www.encodeproject.org/files/ENCFF057GKG/@@download/ENCFF057GKG.bed.gz hg19 released missing unfiltered alignments ENCFF929AWJ bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF471WLV 6341953 ENCODE Processing Pipeline b55cda7b5759eaf429e79fa33aa4ff83 https://www.encodeproject.org/files/ENCFF929AWJ/@@download/ENCFF929AWJ.bed.gz hg19 released missing unfiltered alignments ENCFF148VLB bed narrowPeak conservative idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF057GKG, ENCFF400BXE, ENCFF929AWJ 168994 ENCODE Processing Pipeline c3ec8b30735636847557c4dc4c33131d https://www.encodeproject.org/files/ENCFF148VLB/@@download/ENCFF148VLB.bed.gz hg19 released missing unfiltered alignments ENCFF197OGH bed narrowPeak optimal idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF057GKG, ENCFF400BXE, ENCFF929AWJ 255168 ENCODE Processing Pipeline c15d2ef58a82ef9fef93dd34f601b9fe https://www.encodeproject.org/files/ENCFF197OGH/@@download/ENCFF197OGH.bed.gz hg19 released missing unfiltered alignments ENCFF400BXE bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF471WLV, ENCFF581ZJL, ENCFF821TOA 7231144 ENCODE Processing Pipeline be3d1c655e0c192b2e782be178ccd282 https://www.encodeproject.org/files/ENCFF400BXE/@@download/ENCFF400BXE.bed.gz hg19 released missing unfiltered alignments ENCFF286BGV bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF425DVG, ENCFF581ZJL 6176129 ENCODE Processing Pipeline c9a3e2a7d340aab9c112f48ab6fb8c0c https://www.encodeproject.org/files/ENCFF286BGV/@@download/ENCFF286BGV.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF191CDX bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF366IHT, ENCFF425DVG, ENCFF581ZJL 7039698 ENCODE Processing Pipeline 40bc967ea9077eb3884225f23973c5b5 https://www.encodeproject.org/files/ENCFF191CDX/@@download/ENCFF191CDX.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF010VLV bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF366IHT 6282170 ENCODE Processing Pipeline eafd607c9835055ae6d129e2c51038f4 https://www.encodeproject.org/files/ENCFF010VLV/@@download/ENCFF010VLV.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF845CXJ bed narrowPeak conservative idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF010VLV, ENCFF191CDX, ENCFF286BGV 35858 ENCODE Processing Pipeline dd7220fae12206cce889215ed857d759 https://www.encodeproject.org/files/ENCFF845CXJ/@@download/ENCFF845CXJ.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF399GAE bed narrowPeak optimal idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF010VLV, ENCFF191CDX, ENCFF286BGV 48865 ENCODE Processing Pipeline b4f54e4c49a4190a7b2f6cf67ec4bb84 https://www.encodeproject.org/files/ENCFF399GAE/@@download/ENCFF399GAE.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF380JJE bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF980TTL 6022156 ENCODE Processing Pipeline a26fae2825e5a0bc9477bd97f9d5d85d https://www.encodeproject.org/files/ENCFF380JJE/@@download/ENCFF380JJE.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF990OKM bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF245YPG 6094093 ENCODE Processing Pipeline 1424c40fecd54cff0924886f8364e5a0 https://www.encodeproject.org/files/ENCFF990OKM/@@download/ENCFF990OKM.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF743YDQ bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF245YPG, ENCFF980TTL 6981108 ENCODE Processing Pipeline 2c305fef9fd359fe98355ef6b71b4bea https://www.encodeproject.org/files/ENCFF743YDQ/@@download/ENCFF743YDQ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF777MDP bed narrowPeak conservative idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF380JJE, ENCFF419RSJ, ENCFF743YDQ, ENCFF990OKM 35841 ENCODE Processing Pipeline cb5fab9683426991b76e6b7ab06a4c8f https://www.encodeproject.org/files/ENCFF777MDP/@@download/ENCFF777MDP.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF159MQI bed narrowPeak optimal idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF380JJE, ENCFF419RSJ, ENCFF743YDQ, ENCFF990OKM 48563 ENCODE Processing Pipeline 552dcc1a4366dc2b4561aef2a19e6fbc https://www.encodeproject.org/files/ENCFF159MQI/@@download/ENCFF159MQI.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF032UMZ bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF948RVR 6940315 ENCODE Processing Pipeline 7fe98b1db8a51da117e0bb6035488924 https://www.encodeproject.org/files/ENCFF032UMZ/@@download/ENCFF032UMZ.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF650HMR bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF262STC, ENCFF581ZJL, ENCFF948RVR 7268761 ENCODE Processing Pipeline 95bafa47f2faeff7d2d871566b7a397f https://www.encodeproject.org/files/ENCFF650HMR/@@download/ENCFF650HMR.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF021DHZ bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF262STC 7016934 ENCODE Processing Pipeline 2b207983b554dccb298e6a982558fbca https://www.encodeproject.org/files/ENCFF021DHZ/@@download/ENCFF021DHZ.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF650QRE bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF397LNB 6801433 ENCODE Processing Pipeline 6daffeac26caf78eb938152fe8dbb664 https://www.encodeproject.org/files/ENCFF650QRE/@@download/ENCFF650QRE.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF219QEL bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF700WSI 6931066 ENCODE Processing Pipeline d6e0e882359ceacc4f0c99523f8fff66 https://www.encodeproject.org/files/ENCFF219QEL/@@download/ENCFF219QEL.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF676XEI bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF397LNB, ENCFF700WSI 7247901 ENCODE Processing Pipeline 12997715425bce34a2f104788cd94e9f https://www.encodeproject.org/files/ENCFF676XEI/@@download/ENCFF676XEI.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF023PLP bed narrowPeak conservative idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF219QEL, ENCFF419RSJ, ENCFF650QRE, ENCFF676XEI 258032 ENCODE Processing Pipeline 8024a88a7c27ba193731001e1ab55caa https://www.encodeproject.org/files/ENCFF023PLP/@@download/ENCFF023PLP.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF728KKP bed narrowPeak optimal idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF219QEL, ENCFF419RSJ, ENCFF650QRE, ENCFF676XEI 383162 ENCODE Processing Pipeline 8dd1f3b760d18bb50be1a56c01c5bcf3 https://www.encodeproject.org/files/ENCFF728KKP/@@download/ENCFF728KKP.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF981VUX bed narrowPeak conservative idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF021DHZ, ENCFF032UMZ, ENCFF650HMR 211292 ENCODE Processing Pipeline eb96ca3f7828b9ca78b44ddbe4345336 https://www.encodeproject.org/files/ENCFF981VUX/@@download/ENCFF981VUX.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF074EZL bed narrowPeak optimal idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF021DHZ, ENCFF032UMZ, ENCFF650HMR 321865 ENCODE Processing Pipeline 7e52fb41f5a8121abd5a3b5a07f42747 https://www.encodeproject.org/files/ENCFF074EZL/@@download/ENCFF074EZL.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF110WHJ bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF862XFS 5663782 ENCODE Processing Pipeline fd128ffdaa7fd80c453ef7691c01b730 https://www.encodeproject.org/files/ENCFF110WHJ/@@download/ENCFF110WHJ.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF799KQV bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF323IVG 6007579 ENCODE Processing Pipeline 5eeb4d67c018aaa2ab36fe96ba89d924 https://www.encodeproject.org/files/ENCFF799KQV/@@download/ENCFF799KQV.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF806AJO bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF323IVG, ENCFF862XFS 6943476 ENCODE Processing Pipeline 0d638464f5d2e31134c3ec9dda315a17 https://www.encodeproject.org/files/ENCFF806AJO/@@download/ENCFF806AJO.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF205LME bed narrowPeak conservative idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF110WHJ, ENCFF419RSJ, ENCFF799KQV, ENCFF806AJO 21261 ENCODE Processing Pipeline 1d182280a8311f07ace6ee7ce48aa9e1 https://www.encodeproject.org/files/ENCFF205LME/@@download/ENCFF205LME.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF054DTJ bed narrowPeak optimal idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF110WHJ, ENCFF419RSJ, ENCFF799KQV, ENCFF806AJO 62610 ENCODE Processing Pipeline 11e37f4d08c13ba386427268a861516b https://www.encodeproject.org/files/ENCFF054DTJ/@@download/ENCFF054DTJ.bed.gz GRCh38 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF027UPQ bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF581ZJL, ENCFF623FBO 6005463 ENCODE Processing Pipeline 1353812070a8ae4076074665d90ec565 https://www.encodeproject.org/files/ENCFF027UPQ/@@download/ENCFF027UPQ.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF662CIT bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF051LWI, ENCFF687OFO 5665796 ENCODE Processing Pipeline 734bfef27a0bf430b9620e9a05ddb2b0 https://www.encodeproject.org/files/ENCFF662CIT/@@download/ENCFF662CIT.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF202AHW bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF623FBO, ENCFF687OFO 6939829 ENCODE Processing Pipeline f60bc81957085889e127495f12db228a https://www.encodeproject.org/files/ENCFF202AHW/@@download/ENCFF202AHW.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF401FXT bed narrowPeak conservative idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF001TDO, ENCFF027UPQ, ENCFF202AHW, ENCFF662CIT 20186 ENCODE Processing Pipeline 0970677dc42cc851e920616c085ce58c https://www.encodeproject.org/files/ENCFF401FXT/@@download/ENCFF401FXT.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF462CPT bed narrowPeak optimal idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF001TDO, ENCFF027UPQ, ENCFF202AHW, ENCFF662CIT 61355 ENCODE Processing Pipeline e5f4357bf52033266e56f7a93118ed40 https://www.encodeproject.org/files/ENCFF462CPT/@@download/ENCFF462CPT.bed.gz hg19 released antibody characterized with exemption, borderline replicate concordance, low read depth experiment not submitted to GEO ENCFF558BWS bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF335IPE, ENCFF460VLB, ENCFF879OQC, ENCFF890OID 6044352 ENCODE Processing Pipeline 9214e6951304b9d8adf49bcdd36c2dd7 https://www.encodeproject.org/files/ENCFF558BWS/@@download/ENCFF558BWS.bed.gz hg19 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF611XPF bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF890OID 4886038 ENCODE Processing Pipeline b3815ddeec64dda0ee78e87fa3eebd62 https://www.encodeproject.org/files/ENCFF611XPF/@@download/ENCFF611XPF.bed.gz hg19 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF315GZR bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF460VLB, ENCFF879OQC 4255538 ENCODE Processing Pipeline 4f8d22993149919034182d1036579416 https://www.encodeproject.org/files/ENCFF315GZR/@@download/ENCFF315GZR.bed.gz hg19 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF808CFK bed narrowPeak conservative idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF315GZR, ENCFF558BWS, ENCFF611XPF 27851 ENCODE Processing Pipeline b907dc9da9a5797b4a3025ff2473167f https://www.encodeproject.org/files/ENCFF808CFK/@@download/ENCFF808CFK.bed.gz hg19 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF660VPM bed narrowPeak optimal idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF315GZR, ENCFF558BWS, ENCFF611XPF 48570 ENCODE Processing Pipeline 627872c6c63dc5283d8687e9efa8fe7b https://www.encodeproject.org/files/ENCFF660VPM/@@download/ENCFF660VPM.bed.gz hg19 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF899ZVN bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF003FNG, ENCFF417FHN 5977605 ENCODE Processing Pipeline 7cae2a795579bba647f9eb7ecbf87719 https://www.encodeproject.org/files/ENCFF899ZVN/@@download/ENCFF899ZVN.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF484FZK bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF417FHN 4091359 ENCODE Processing Pipeline 1db8132c60456cce55068c509756f938 https://www.encodeproject.org/files/ENCFF484FZK/@@download/ENCFF484FZK.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF460HJU bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF003FNG 4663355 ENCODE Processing Pipeline 56a32039f7074be351bdd56e206248f6 https://www.encodeproject.org/files/ENCFF460HJU/@@download/ENCFF460HJU.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF569AQR bed narrowPeak conservative idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF460HJU, ENCFF484FZK, ENCFF899ZVN 26950 ENCODE Processing Pipeline 4dee60c47e9d12c1762d288f21ef47f1 https://www.encodeproject.org/files/ENCFF569AQR/@@download/ENCFF569AQR.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF658SGJ bed narrowPeak optimal idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF460HJU, ENCFF484FZK, ENCFF899ZVN 46712 ENCODE Processing Pipeline 4de570718b1b7ba652606e67430ff594 https://www.encodeproject.org/files/ENCFF658SGJ/@@download/ENCFF658SGJ.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF067DNS bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF051LWI, ENCFF324TIY, ENCFF554KBV, ENCFF581ZJL 7211675 ENCODE Processing Pipeline c9ae1d1b3ddb3b60ec351321987dc636 https://www.encodeproject.org/files/ENCFF067DNS/@@download/ENCFF067DNS.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF370RXL bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF051LWI, ENCFF324TIY 6491769 ENCODE Processing Pipeline e4a41a2fa968685a3a194a553f6db1dd https://www.encodeproject.org/files/ENCFF370RXL/@@download/ENCFF370RXL.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF904CJM bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF554KBV, ENCFF581ZJL 6838004 ENCODE Processing Pipeline 8c3b46431cc070beac03de662698d275 https://www.encodeproject.org/files/ENCFF904CJM/@@download/ENCFF904CJM.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF602CFZ bed narrowPeak optimal idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF001TDO, ENCFF067DNS, ENCFF370RXL, ENCFF904CJM 97867 ENCODE Processing Pipeline 514af67301c0f065646dccd0e7160e69 https://www.encodeproject.org/files/ENCFF602CFZ/@@download/ENCFF602CFZ.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF571OOG bed narrowPeak conservative idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF001TDO, ENCFF067DNS, ENCFF370RXL, ENCFF904CJM 63769 ENCODE Processing Pipeline db5ce328093ae8f9009b94c80fb6abe4 https://www.encodeproject.org/files/ENCFF571OOG/@@download/ENCFF571OOG.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF102TJI bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF227IZS, ENCFF362TFV 6338799 ENCODE Processing Pipeline 70b6ceeaf09d0472739ccf59f806ac42 https://www.encodeproject.org/files/ENCFF102TJI/@@download/ENCFF102TJI.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF073ZIR bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF007ALP, ENCFF910IKB 6716028 ENCODE Processing Pipeline b1373c1009188071f6e6569e602e0c25 https://www.encodeproject.org/files/ENCFF073ZIR/@@download/ENCFF073ZIR.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF917IMX bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF007ALP, ENCFF227IZS, ENCFF362TFV, ENCFF910IKB 7192288 ENCODE Processing Pipeline 293af94d92f1e0394a90b63c26ca12cd https://www.encodeproject.org/files/ENCFF917IMX/@@download/ENCFF917IMX.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF467REJ bed narrowPeak conservative idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF073ZIR, ENCFF102TJI, ENCFF419RSJ, ENCFF917IMX 63208 ENCODE Processing Pipeline 41d8cfeea90298df4b91b6c93a714b66 https://www.encodeproject.org/files/ENCFF467REJ/@@download/ENCFF467REJ.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF538GSS bed narrowPeak optimal idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF073ZIR, ENCFF102TJI, ENCFF419RSJ, ENCFF917IMX 101839 ENCODE Processing Pipeline de93a2419e7685898d66b352c86f0e60 https://www.encodeproject.org/files/ENCFF538GSS/@@download/ENCFF538GSS.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF188GHO bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF928REO 6860119 ENCODE Processing Pipeline fd59c3000d29184e8110f9bdc7c6ecc8 https://www.encodeproject.org/files/ENCFF188GHO/@@download/ENCFF188GHO.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF451DBC bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF599UMI, ENCFF928REO 7143490 ENCODE Processing Pipeline 4e4e927c22ff9106926871ad25ca7a9f https://www.encodeproject.org/files/ENCFF451DBC/@@download/ENCFF451DBC.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF158PJI bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF581ZJL, ENCFF599UMI 6292302 ENCODE Processing Pipeline 5817bd2bc47a0d98ce9dbc84ff763fe4 https://www.encodeproject.org/files/ENCFF158PJI/@@download/ENCFF158PJI.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF327NEA bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF373AFZ 6150060 ENCODE Processing Pipeline 7fe57bd5d92128f13b9d59975aae8ad2 https://www.encodeproject.org/files/ENCFF327NEA/@@download/ENCFF327NEA.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF060MAZ bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF563FZR 6723612 ENCODE Processing Pipeline 1279efdb9aaa9db46c04750a0a805be1 https://www.encodeproject.org/files/ENCFF060MAZ/@@download/ENCFF060MAZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF738BXO bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF373AFZ, ENCFF563FZR 7155862 ENCODE Processing Pipeline 14df7082ddd06acdb544ec1b9b0c008a https://www.encodeproject.org/files/ENCFF738BXO/@@download/ENCFF738BXO.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF606WYG bed narrowPeak conservative idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF060MAZ, ENCFF327NEA, ENCFF419RSJ, ENCFF738BXO 352017 ENCODE Processing Pipeline c6cbfb388bba0fa6bb93bfb303a38b28 https://www.encodeproject.org/files/ENCFF606WYG/@@download/ENCFF606WYG.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF490EQR bed narrowPeak optimal idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF060MAZ, ENCFF327NEA, ENCFF419RSJ, ENCFF738BXO 413118 ENCODE Processing Pipeline 8e7d965948f669a017bdd7bc2b7685dd https://www.encodeproject.org/files/ENCFF490EQR/@@download/ENCFF490EQR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF492GXZ bed narrowPeak optimal idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF158PJI, ENCFF188GHO, ENCFF451DBC 368132 ENCODE Processing Pipeline 78f64e4354c002e60b1ba43e77ebe73c https://www.encodeproject.org/files/ENCFF492GXZ/@@download/ENCFF492GXZ.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF960WIT bed narrowPeak conservative idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF158PJI, ENCFF188GHO, ENCFF451DBC 311177 ENCODE Processing Pipeline 097a863b523b10d3ecf4bbba3e058663 https://www.encodeproject.org/files/ENCFF960WIT/@@download/ENCFF960WIT.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF612BZJ bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF845QLW 6936134 ENCODE Processing Pipeline d72f450110faad9e7f9859b35d269540 https://www.encodeproject.org/files/ENCFF612BZJ/@@download/ENCFF612BZJ.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF670NDN bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF666QOX 7008065 ENCODE Processing Pipeline fb61bad4afd6e625fe1b841d2b318320 https://www.encodeproject.org/files/ENCFF670NDN/@@download/ENCFF670NDN.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF845UBO bed narrowPeak conservative idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF612BZJ, ENCFF670NDN, ENCFF763UDO 450573 ENCODE Processing Pipeline b50abfe1e7a4c0e6033f60d10886aea4 https://www.encodeproject.org/files/ENCFF845UBO/@@download/ENCFF845UBO.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF937VZI bed narrowPeak optimal idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF612BZJ, ENCFF670NDN, ENCFF763UDO 484306 ENCODE Processing Pipeline 42f2932c2c3ab72016c12df15687dfd1 https://www.encodeproject.org/files/ENCFF937VZI/@@download/ENCFF937VZI.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF763UDO bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF666QOX, ENCFF845QLW 7275287 ENCODE Processing Pipeline 559de1fbe59b62a1e14173f0fb447d3a https://www.encodeproject.org/files/ENCFF763UDO/@@download/ENCFF763UDO.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF859OSW bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF725WJS, ENCFF910IKB 6826738 ENCODE Processing Pipeline 4d89c51618b3622ca92cdefb0e1924e9 https://www.encodeproject.org/files/ENCFF859OSW/@@download/ENCFF859OSW.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF883AML bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF559BJS 6876282 ENCODE Processing Pipeline 2cf32c5d73ae6995667389fcc3ac87c5 https://www.encodeproject.org/files/ENCFF883AML/@@download/ENCFF883AML.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF676PAG bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF227IZS, ENCFF559BJS, ENCFF725WJS, ENCFF910IKB 7206574 ENCODE Processing Pipeline 2fad57a1780724f2da652eee6f8b7a15 https://www.encodeproject.org/files/ENCFF676PAG/@@download/ENCFF676PAG.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF909KNE bed narrowPeak conservative idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF676PAG, ENCFF859OSW, ENCFF883AML 430233 ENCODE Processing Pipeline 4c699a00b4ecc06deba87ba13230b7a3 https://www.encodeproject.org/files/ENCFF909KNE/@@download/ENCFF909KNE.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF881ONC bed narrowPeak optimal idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF676PAG, ENCFF859OSW, ENCFF883AML 459016 ENCODE Processing Pipeline f8a5691141a23717efbeb8a04ca5463d https://www.encodeproject.org/files/ENCFF881ONC/@@download/ENCFF881ONC.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF916KLD bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF295KFF, ENCFF879OQC 5050350 ENCODE Processing Pipeline d8a3931ec7358fc3503f9890169714fb https://www.encodeproject.org/files/ENCFF916KLD/@@download/ENCFF916KLD.bed.gz hg19 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF405AOP bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF592VTW 4718152 ENCODE Processing Pipeline 66a344d1223b1829dba0c2f3c5e1cc85 https://www.encodeproject.org/files/ENCFF405AOP/@@download/ENCFF405AOP.bed.gz hg19 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF085MZN bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF295KFF, ENCFF335IPE, ENCFF592VTW, ENCFF879OQC 6265867 ENCODE Processing Pipeline 04b57985a2d895f62d03391011084640 https://www.encodeproject.org/files/ENCFF085MZN/@@download/ENCFF085MZN.bed.gz hg19 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF263ZGK bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF623PVZ 3925957 ENCODE Processing Pipeline dc36f3209359a1374c927d8e3a759431 https://www.encodeproject.org/files/ENCFF263ZGK/@@download/ENCFF263ZGK.bed.gz GRCh38 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF640KEE bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF405EME, ENCFF577FNG 4805387 ENCODE Processing Pipeline 47e0dffe82e992e006d488a2a361640e https://www.encodeproject.org/files/ENCFF640KEE/@@download/ENCFF640KEE.bed.gz GRCh38 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF048AYA bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF405EME, ENCFF577FNG, ENCFF623PVZ 5992781 ENCODE Processing Pipeline 4b4dea4e62cefbb636697aa4cbefad4c https://www.encodeproject.org/files/ENCFF048AYA/@@download/ENCFF048AYA.bed.gz GRCh38 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF777MYW bed narrowPeak optimal idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF048AYA, ENCFF263ZGK, ENCFF419RSJ, ENCFF640KEE 53894 ENCODE Processing Pipeline 003e9a52b0eec20cf37812002d52be38 https://www.encodeproject.org/files/ENCFF777MYW/@@download/ENCFF777MYW.bed.gz GRCh38 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF869JTA bed narrowPeak conservative idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF048AYA, ENCFF263ZGK, ENCFF419RSJ, ENCFF640KEE 43284 ENCODE Processing Pipeline 81e2776d6b285184b32b8897dab11d2b https://www.encodeproject.org/files/ENCFF869JTA/@@download/ENCFF869JTA.bed.gz GRCh38 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF708WDH bed narrowPeak conservative idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF085MZN, ENCFF405AOP, ENCFF916KLD 36945 ENCODE Processing Pipeline 8a05d236c3a99789165ed12aa6b2c599 https://www.encodeproject.org/files/ENCFF708WDH/@@download/ENCFF708WDH.bed.gz hg19 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF890YEO bed narrowPeak optimal idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF085MZN, ENCFF405AOP, ENCFF916KLD 46140 ENCODE Processing Pipeline c0e06ca08ca05f128423079002568224 https://www.encodeproject.org/files/ENCFF890YEO/@@download/ENCFF890YEO.bed.gz hg19 released antibody characterized with exemption, low read depth, borderline replicate concordance, low read length missing unfiltered alignments ENCFF040DGA bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF169POV, ENCFF879OQC 5183776 ENCODE Processing Pipeline d9c3da1be91de8c8c2e9fa1a52c88cdc https://www.encodeproject.org/files/ENCFF040DGA/@@download/ENCFF040DGA.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF511MUZ bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF142DHE, ENCFF169POV, ENCFF335IPE, ENCFF879OQC 6576913 ENCODE Processing Pipeline 68449846a7b35262d721f508bfd0d5d4 https://www.encodeproject.org/files/ENCFF511MUZ/@@download/ENCFF511MUZ.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF656CUX bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF142DHE, ENCFF335IPE 5509302 ENCODE Processing Pipeline 942fb93cdd4270c3101187df6db73966 https://www.encodeproject.org/files/ENCFF656CUX/@@download/ENCFF656CUX.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF754IPA bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF071KOM 5352511 ENCODE Processing Pipeline fa8eec71959d25b682dfb21f43951c1d https://www.encodeproject.org/files/ENCFF754IPA/@@download/ENCFF754IPA.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF668AKQ bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF236ZUN 5014630 ENCODE Processing Pipeline 4049c27a5843a5815bf35159520dbd49 https://www.encodeproject.org/files/ENCFF668AKQ/@@download/ENCFF668AKQ.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF888HUZ bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF071KOM, ENCFF236ZUN 6409968 ENCODE Processing Pipeline 37aade51ca8c101b19a1ba9287be93d0 https://www.encodeproject.org/files/ENCFF888HUZ/@@download/ENCFF888HUZ.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF329HLY bed narrowPeak conservative idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF668AKQ, ENCFF754IPA, ENCFF888HUZ 206776 ENCODE Processing Pipeline 1c824728b9b5a4a4405445ae382afbc2 https://www.encodeproject.org/files/ENCFF329HLY/@@download/ENCFF329HLY.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF704VDI bed narrowPeak optimal idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF668AKQ, ENCFF754IPA, ENCFF888HUZ 215226 ENCODE Processing Pipeline d73efa30d687f0d6906ccc21b9513aa8 https://www.encodeproject.org/files/ENCFF704VDI/@@download/ENCFF704VDI.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF090QJO bed narrowPeak conservative idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF040DGA, ENCFF511MUZ, ENCFF656CUX 180739 ENCODE Processing Pipeline e3cadc3a3da564b018420bd1c26738f9 https://www.encodeproject.org/files/ENCFF090QJO/@@download/ENCFF090QJO.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF163VUK bed narrowPeak optimal idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF040DGA, ENCFF511MUZ, ENCFF656CUX 217692 ENCODE Processing Pipeline c743b22b355085c49a0ee67adfa8f5f2 https://www.encodeproject.org/files/ENCFF163VUK/@@download/ENCFF163VUK.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF804ZDO bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF474PWT, ENCFF581ZJL 6601859 ENCODE Processing Pipeline 422447557aaa8aeac1f203d11e682a59 https://www.encodeproject.org/files/ENCFF804ZDO/@@download/ENCFF804ZDO.bed.gz hg19 released missing unfiltered alignments ENCFF666TVL bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF051LWI, ENCFF452QYJ 6573285 ENCODE Processing Pipeline da592a6f1324752fe87aee24fb491ba2 https://www.encodeproject.org/files/ENCFF666TVL/@@download/ENCFF666TVL.bed.gz hg19 released missing unfiltered alignments ENCFF297LLA bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF051LWI, ENCFF452QYJ, ENCFF474PWT, ENCFF581ZJL 7182008 ENCODE Processing Pipeline 3c276986e7119a604cfce800230a06fb https://www.encodeproject.org/files/ENCFF297LLA/@@download/ENCFF297LLA.bed.gz hg19 released missing unfiltered alignments ENCFF015PTS bed narrowPeak conservative idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF001TDO, ENCFF297LLA, ENCFF666TVL, ENCFF804ZDO 70197 ENCODE Processing Pipeline 413513dd7b67ac322964e26d032b4055 https://www.encodeproject.org/files/ENCFF015PTS/@@download/ENCFF015PTS.bed.gz hg19 released missing unfiltered alignments ENCFF986MHU bed narrowPeak optimal idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF001TDO, ENCFF297LLA, ENCFF666TVL, ENCFF804ZDO 116563 ENCODE Processing Pipeline a5428ff5fcb7004b76804e57d613d5fd https://www.encodeproject.org/files/ENCFF986MHU/@@download/ENCFF986MHU.bed.gz hg19 released missing unfiltered alignments ENCFF697UPK bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF318SPV 6470064 ENCODE Processing Pipeline cabdf25c8664d4b276e9a4d74a15582f https://www.encodeproject.org/files/ENCFF697UPK/@@download/ENCFF697UPK.bed.gz GRCh38 released missing unfiltered alignments ENCFF734RJI bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF833ZOK 6446115 ENCODE Processing Pipeline f65c21e8321457a36cd195892b87859b https://www.encodeproject.org/files/ENCFF734RJI/@@download/ENCFF734RJI.bed.gz GRCh38 released missing unfiltered alignments ENCFF270BVJ bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF318SPV, ENCFF833ZOK 7153186 ENCODE Processing Pipeline b7c5779df2a501f9b00886dad5492d5e https://www.encodeproject.org/files/ENCFF270BVJ/@@download/ENCFF270BVJ.bed.gz GRCh38 released missing unfiltered alignments ENCFF408CMK bed narrowPeak conservative idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF270BVJ, ENCFF419RSJ, ENCFF697UPK, ENCFF734RJI 69195 ENCODE Processing Pipeline 444cf63da29da4f0c3fb90cfb12b82e3 https://www.encodeproject.org/files/ENCFF408CMK/@@download/ENCFF408CMK.bed.gz GRCh38 released missing unfiltered alignments ENCFF329STX bed narrowPeak optimal idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF270BVJ, ENCFF419RSJ, ENCFF697UPK, ENCFF734RJI 116079 ENCODE Processing Pipeline d1f2b121f7aa2350682803c87d5f63f2 https://www.encodeproject.org/files/ENCFF329STX/@@download/ENCFF329STX.bed.gz GRCh38 released missing unfiltered alignments ENCFF203SUN bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF073XZO 6769212 ENCODE Processing Pipeline 23d5725b84132909e80e5661417b18a3 https://www.encodeproject.org/files/ENCFF203SUN/@@download/ENCFF203SUN.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF037YFB bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF135OYM, ENCFF581ZJL 6453786 ENCODE Processing Pipeline 8f2d9cef390dd17b72020147d0bd37c5 https://www.encodeproject.org/files/ENCFF037YFB/@@download/ENCFF037YFB.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF732HYH bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF073XZO, ENCFF135OYM, ENCFF581ZJL 7124871 ENCODE Processing Pipeline 3ef725c04659439dcfb40c8b0e4b2113 https://www.encodeproject.org/files/ENCFF732HYH/@@download/ENCFF732HYH.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF491ELB bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF931HHQ 6648837 ENCODE Processing Pipeline c91f4f0afc2a3634203ae9858c4fa288 https://www.encodeproject.org/files/ENCFF491ELB/@@download/ENCFF491ELB.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF754RKE bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF703CKR, ENCFF910IKB, ENCFF931HHQ 7175534 ENCODE Processing Pipeline 5542a6f954d9927d2385f3c1c24f60dd https://www.encodeproject.org/files/ENCFF754RKE/@@download/ENCFF754RKE.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF066CWG bed narrowPeak optimal idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF491ELB, ENCFF621LTB, ENCFF754RKE 416652 ENCODE Processing Pipeline e5b124183cfc87b447bf46aeec688b49 https://www.encodeproject.org/files/ENCFF066CWG/@@download/ENCFF066CWG.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF621LTB bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF703CKR, ENCFF910IKB 6311330 ENCODE Processing Pipeline 9c0e0fa9325b5b66f6777ec47fa2ce38 https://www.encodeproject.org/files/ENCFF621LTB/@@download/ENCFF621LTB.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF154SRU bed narrowPeak conservative idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF491ELB, ENCFF621LTB, ENCFF754RKE 329078 ENCODE Processing Pipeline da971323006e67aad36b282e569f788b https://www.encodeproject.org/files/ENCFF154SRU/@@download/ENCFF154SRU.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF540IYS bed narrowPeak conservative idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF037YFB, ENCFF203SUN, ENCFF732HYH 280128 ENCODE Processing Pipeline bbcf86dc31f22b419bcd6680ed3fb772 https://www.encodeproject.org/files/ENCFF540IYS/@@download/ENCFF540IYS.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF248VHN bed narrowPeak optimal idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF037YFB, ENCFF203SUN, ENCFF732HYH 358492 ENCODE Processing Pipeline 6617b946d9b9a9e353cf71f681323126 https://www.encodeproject.org/files/ENCFF248VHN/@@download/ENCFF248VHN.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF377LWJ bed narrowPeak peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 2 ENCFF046AZQ, ENCFF051LWI 6617146 ENCODE Processing Pipeline e3d30fdb25eebbec5db2ed672cdf83fa https://www.encodeproject.org/files/ENCFF377LWJ/@@download/ENCFF377LWJ.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF669FWC bed narrowPeak peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 1 ENCFF146VMQ, ENCFF581ZJL 6634486 ENCODE Processing Pipeline 1e9684e523cc9743cd403978a6911184 https://www.encodeproject.org/files/ENCFF669FWC/@@download/ENCFF669FWC.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF087GPO bed narrowPeak peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 1, 2 ENCFF046AZQ, ENCFF051LWI, ENCFF146VMQ, ENCFF581ZJL 7185985 ENCODE Processing Pipeline bd6a9190e0315579affc5f4b556c2a12 https://www.encodeproject.org/files/ENCFF087GPO/@@download/ENCFF087GPO.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF799FQQ bed narrowPeak conservative idr thresholded peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF087GPO, ENCFF377LWJ, ENCFF669FWC 17715 ENCODE Processing Pipeline 36e65605ddd2189ffb6aef2422086aab https://www.encodeproject.org/files/ENCFF799FQQ/@@download/ENCFF799FQQ.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF821VBM bed narrowPeak optimal idr thresholded peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF087GPO, ENCFF377LWJ, ENCFF669FWC 40796 ENCODE Processing Pipeline 4c2f9aa249bf5ca54365ab220deeccc7 https://www.encodeproject.org/files/ENCFF821VBM/@@download/ENCFF821VBM.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF462LIN bed narrowPeak peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 1 ENCFF746ASI 6497093 ENCODE Processing Pipeline 886612c61d50bd2097db0363a68c1874 https://www.encodeproject.org/files/ENCFF462LIN/@@download/ENCFF462LIN.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF043QUK bed narrowPeak peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 2 ENCFF864RNL 6492523 ENCODE Processing Pipeline bed701436d0d8056af4fa9cae9f04ee5 https://www.encodeproject.org/files/ENCFF043QUK/@@download/ENCFF043QUK.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF250UEQ bed narrowPeak peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 1, 2 ENCFF746ASI, ENCFF864RNL 7164758 ENCODE Processing Pipeline 459274e8fc7b5fc0599e88dcc29c5b66 https://www.encodeproject.org/files/ENCFF250UEQ/@@download/ENCFF250UEQ.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF738EAY bed narrowPeak conservative idr thresholded peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 1, 2 ENCFF043QUK, ENCFF250UEQ, ENCFF419RSJ, ENCFF462LIN 17009 ENCODE Processing Pipeline da4645ba59afb5c9c671998aede33a00 https://www.encodeproject.org/files/ENCFF738EAY/@@download/ENCFF738EAY.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF671BMR bed narrowPeak optimal idr thresholded peaks ENCSR626QJQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CSDE1-human ENCAB563OWJ DNA False 2016-09-01 ENCODE 1, 2 ENCFF043QUK, ENCFF250UEQ, ENCFF419RSJ, ENCFF462LIN 43300 ENCODE Processing Pipeline 62e1bc4c843abbf2597b0ea638cf14e8 https://www.encodeproject.org/files/ENCFF671BMR/@@download/ENCFF671BMR.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF221YZK bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF530XAQ, ENCFF581ZJL 6885176 ENCODE Processing Pipeline c1e525a49f7412ded1a318d271cfeeda https://www.encodeproject.org/files/ENCFF221YZK/@@download/ENCFF221YZK.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF873ZUQ bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF233IID 6929067 ENCODE Processing Pipeline e474c90e1cb307a33e2f01fe1d28d6e2 https://www.encodeproject.org/files/ENCFF873ZUQ/@@download/ENCFF873ZUQ.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF113GBF bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF233IID, ENCFF530XAQ, ENCFF581ZJL 7265651 ENCODE Processing Pipeline 71b3437d73c0c5e183b5f44e7c76ae45 https://www.encodeproject.org/files/ENCFF113GBF/@@download/ENCFF113GBF.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF721IEI bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF677JTW, ENCFF910IKB 6896401 ENCODE Processing Pipeline d7e66e9fb69a79fe7ca8bfb8f141c140 https://www.encodeproject.org/files/ENCFF721IEI/@@download/ENCFF721IEI.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF496FSD bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF921IAQ 6919479 ENCODE Processing Pipeline 84950b2e86b94b363dba0e762af5bfe6 https://www.encodeproject.org/files/ENCFF496FSD/@@download/ENCFF496FSD.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF513MBZ bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF677JTW, ENCFF910IKB, ENCFF921IAQ 7165764 ENCODE Processing Pipeline 77ed071150e5a7f4fd4c7255cdff21f5 https://www.encodeproject.org/files/ENCFF513MBZ/@@download/ENCFF513MBZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF410AIK bed narrowPeak conservative idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF496FSD, ENCFF513MBZ, ENCFF721IEI 823921 ENCODE Processing Pipeline ee71e829565cd6295cda45d76c7dd53c https://www.encodeproject.org/files/ENCFF410AIK/@@download/ENCFF410AIK.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF188TBM bed narrowPeak optimal idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF496FSD, ENCFF513MBZ, ENCFF721IEI 917615 ENCODE Processing Pipeline fb05b3614c249aebaa15b71588273a47 https://www.encodeproject.org/files/ENCFF188TBM/@@download/ENCFF188TBM.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF925QJY bed narrowPeak conservative idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF113GBF, ENCFF221YZK, ENCFF873ZUQ 714422 ENCODE Processing Pipeline 317638949f22b9bfc1969222e65adab9 https://www.encodeproject.org/files/ENCFF925QJY/@@download/ENCFF925QJY.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF019ALY bed narrowPeak optimal idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF113GBF, ENCFF221YZK, ENCFF873ZUQ 807730 ENCODE Processing Pipeline 6e5b27278b7140bede72c439e1f952d4 https://www.encodeproject.org/files/ENCFF019ALY/@@download/ENCFF019ALY.bed.gz hg19 released mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF973DVW bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF715AMR 5920237 ENCODE Processing Pipeline 54fb633d2eece5a1f6e510ccce8eafba https://www.encodeproject.org/files/ENCFF973DVW/@@download/ENCFF973DVW.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF918CHH bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF195WOK 5620574 ENCODE Processing Pipeline d7556b845affe37a5c42772f8c80c1bb https://www.encodeproject.org/files/ENCFF918CHH/@@download/ENCFF918CHH.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF902FVT bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF195WOK, ENCFF715AMR 6892634 ENCODE Processing Pipeline 0d7cf528abea37e1f61ff21969efcf50 https://www.encodeproject.org/files/ENCFF902FVT/@@download/ENCFF902FVT.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF740JCX bed narrowPeak conservative idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF902FVT, ENCFF918CHH, ENCFF973DVW 9514 ENCODE Processing Pipeline 14d7be275e791a1a1db454b1e27c4fc6 https://www.encodeproject.org/files/ENCFF740JCX/@@download/ENCFF740JCX.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF520DIY bed narrowPeak optimal idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF902FVT, ENCFF918CHH, ENCFF973DVW 25433 ENCODE Processing Pipeline 9fe8d8108be9a9a2a89fc11da7c04f03 https://www.encodeproject.org/files/ENCFF520DIY/@@download/ENCFF520DIY.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF706LIT bed narrowPeak optimal idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF609DTK, ENCFF669CKL, ENCFF749VLH 26921 ENCODE Processing Pipeline 1fde054e4ffdaa0d943623283ebc001a https://www.encodeproject.org/files/ENCFF706LIT/@@download/ENCFF706LIT.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF749VLH bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF509PRR, ENCFF581ZJL, ENCFF869CLO 6885687 ENCODE Processing Pipeline 3cdd62a71274791f962614d9d85b3c5c https://www.encodeproject.org/files/ENCFF749VLH/@@download/ENCFF749VLH.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF609DTK bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF869CLO 5620010 ENCODE Processing Pipeline 13acb9cf6ce2e69b859c7aabf99aaa7e https://www.encodeproject.org/files/ENCFF609DTK/@@download/ENCFF609DTK.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF669CKL bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF509PRR 5169710 ENCODE Processing Pipeline d898317747cf0dc762e0cc49c37d2566 https://www.encodeproject.org/files/ENCFF669CKL/@@download/ENCFF669CKL.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF452VYJ bed narrowPeak conservative idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF609DTK, ENCFF669CKL, ENCFF749VLH 9905 ENCODE Processing Pipeline 2050dce921d0d27c91ba8d0a271771a6 https://www.encodeproject.org/files/ENCFF452VYJ/@@download/ENCFF452VYJ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing unfiltered alignments ENCFF555TEL bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF750EKT 6657617 ENCODE Processing Pipeline 5ffc028e5f6966158b641136d09a2ec2 https://www.encodeproject.org/files/ENCFF555TEL/@@download/ENCFF555TEL.bed.gz GRCh38 released missing unfiltered alignments ENCFF522CRC bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF563DGZ 6744559 ENCODE Processing Pipeline fdfb738531591607b7a83d3a74eb0f1a https://www.encodeproject.org/files/ENCFF522CRC/@@download/ENCFF522CRC.bed.gz GRCh38 released missing unfiltered alignments ENCFF930YEZ bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF563DGZ, ENCFF750EKT 7232862 ENCODE Processing Pipeline f5625116dea33ad50cfcfcf0e294a06d https://www.encodeproject.org/files/ENCFF930YEZ/@@download/ENCFF930YEZ.bed.gz GRCh38 released missing unfiltered alignments ENCFF558XIL bed narrowPeak optimal idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF522CRC, ENCFF555TEL, ENCFF930YEZ 278755 ENCODE Processing Pipeline 8d835dff011022794af375901627d2ee https://www.encodeproject.org/files/ENCFF558XIL/@@download/ENCFF558XIL.bed.gz GRCh38 released missing unfiltered alignments ENCFF778TXT bed narrowPeak conservative idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF084ILX, ENCFF605LJE, ENCFF850ENR 284610 ENCODE Processing Pipeline 37c88c600d2774186bc3228c17581896 https://www.encodeproject.org/files/ENCFF778TXT/@@download/ENCFF778TXT.bed.gz hg19 released missing unfiltered alignments ENCFF084ILX bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF063DLZ, ENCFF581ZJL 6667597 ENCODE Processing Pipeline 360bae6f96a56e295c8cf96a5d962f32 https://www.encodeproject.org/files/ENCFF084ILX/@@download/ENCFF084ILX.bed.gz hg19 released missing unfiltered alignments ENCFF850ENR bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF539VZJ 6735588 ENCODE Processing Pipeline f1a7d7acf30f8769e3ec52429b8541d6 https://www.encodeproject.org/files/ENCFF850ENR/@@download/ENCFF850ENR.bed.gz hg19 released missing unfiltered alignments ENCFF605LJE bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF063DLZ, ENCFF539VZJ, ENCFF581ZJL 7237606 ENCODE Processing Pipeline 86a80d8937e56eb9206edddc2230c24d https://www.encodeproject.org/files/ENCFF605LJE/@@download/ENCFF605LJE.bed.gz hg19 released missing unfiltered alignments ENCFF662MVX bed narrowPeak optimal idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF084ILX, ENCFF605LJE, ENCFF850ENR 384677 ENCODE Processing Pipeline 21d4fc2074ca86610ddb256b957f4bfa https://www.encodeproject.org/files/ENCFF662MVX/@@download/ENCFF662MVX.bed.gz hg19 released missing unfiltered alignments ENCFF270KFK bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF990RGE 6953744 ENCODE Processing Pipeline b4ff747cda216dbd657bb70ed71c07ec https://www.encodeproject.org/files/ENCFF270KFK/@@download/ENCFF270KFK.bed.gz GRCh38 released missing unfiltered alignments ENCFF866GQW bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF205JWI 7081882 ENCODE Processing Pipeline 837bf54ed6ea5dfa0037ea25db86d35f https://www.encodeproject.org/files/ENCFF866GQW/@@download/ENCFF866GQW.bed.gz GRCh38 released missing unfiltered alignments ENCFF604PYY bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF205JWI, ENCFF990RGE 7076825 ENCODE Processing Pipeline b0db0cc49e12aeef6a7bd83ff809d09e https://www.encodeproject.org/files/ENCFF604PYY/@@download/ENCFF604PYY.bed.gz GRCh38 released missing unfiltered alignments ENCFF315QEI bed narrowPeak conservative idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF270KFK, ENCFF419RSJ, ENCFF604PYY, ENCFF866GQW 719807 ENCODE Processing Pipeline 5c6e471d10b6e130280ca21b58d0489b https://www.encodeproject.org/files/ENCFF315QEI/@@download/ENCFF315QEI.bed.gz GRCh38 released missing unfiltered alignments ENCFF217ZTP bed narrowPeak optimal idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF270KFK, ENCFF419RSJ, ENCFF604PYY, ENCFF866GQW 810140 ENCODE Processing Pipeline 2a578032f9978572c617f3bea687c6e1 https://www.encodeproject.org/files/ENCFF217ZTP/@@download/ENCFF217ZTP.bed.gz GRCh38 released missing unfiltered alignments ENCFF023VOJ bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF419BCJ, ENCFF581ZJL 7181376 ENCODE Processing Pipeline 3083a486dc1b0b3129c6eff438f6bf88 https://www.encodeproject.org/files/ENCFF023VOJ/@@download/ENCFF023VOJ.bed.gz hg19 released missing unfiltered alignments ENCFF577FLU bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF275MTH, ENCFF419BCJ, ENCFF581ZJL 7073849 ENCODE Processing Pipeline 79d74b742addce40d1078d853ff2a677 https://www.encodeproject.org/files/ENCFF577FLU/@@download/ENCFF577FLU.bed.gz hg19 released missing unfiltered alignments ENCFF206HJJ bed narrowPeak conservative idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF023VOJ, ENCFF577FLU, ENCFF994IZJ 721887 ENCODE Processing Pipeline 233433cd141483e4d68e08405ce9eebf https://www.encodeproject.org/files/ENCFF206HJJ/@@download/ENCFF206HJJ.bed.gz hg19 released missing unfiltered alignments ENCFF823SYE bed narrowPeak optimal idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF023VOJ, ENCFF577FLU, ENCFF994IZJ 812173 ENCODE Processing Pipeline 59b72560947ff818b0d51aac88596a9b https://www.encodeproject.org/files/ENCFF823SYE/@@download/ENCFF823SYE.bed.gz hg19 released missing unfiltered alignments ENCFF994IZJ bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF275MTH 7191587 ENCODE Processing Pipeline 36d1b5a86c8378751f9dce955bef0765 https://www.encodeproject.org/files/ENCFF994IZJ/@@download/ENCFF994IZJ.bed.gz hg19 released missing unfiltered alignments ENCFF438RUW bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF042HRP, ENCFF581ZJL 7190369 ENCODE Processing Pipeline 29979f3a75ae2c25cf3e69c12045ab0c https://www.encodeproject.org/files/ENCFF438RUW/@@download/ENCFF438RUW.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF601IZU bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF042HRP, ENCFF051LWI, ENCFF465ENL, ENCFF581ZJL 7275622 ENCODE Processing Pipeline b5cf75c692c3f8c8a6ecae96896aa146 https://www.encodeproject.org/files/ENCFF601IZU/@@download/ENCFF601IZU.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF648JAT bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF465ENL 6825636 ENCODE Processing Pipeline 573107bfc0e8e29ef5b25a41ef1594c0 https://www.encodeproject.org/files/ENCFF648JAT/@@download/ENCFF648JAT.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF949HEL bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF682OCC, ENCFF910IKB 7150016 ENCODE Processing Pipeline 41f6f260225cf2a2cb3f73d4e8965429 https://www.encodeproject.org/files/ENCFF949HEL/@@download/ENCFF949HEL.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF991PXQ bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF639CLN 6726180 ENCODE Processing Pipeline 93f78692efaca8138b2e133a8c199266 https://www.encodeproject.org/files/ENCFF991PXQ/@@download/ENCFF991PXQ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF318JNW bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF639CLN, ENCFF682OCC, ENCFF910IKB 7271574 ENCODE Processing Pipeline 11cffb5a9615064667a373e7bea3de88 https://www.encodeproject.org/files/ENCFF318JNW/@@download/ENCFF318JNW.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF710ZFM bed narrowPeak conservative idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF318JNW, ENCFF419RSJ, ENCFF949HEL, ENCFF991PXQ 135199 ENCODE Processing Pipeline db2e5731edcb19bb8ed3dbabc8c35cba https://www.encodeproject.org/files/ENCFF710ZFM/@@download/ENCFF710ZFM.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF163YZB bed narrowPeak optimal idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF318JNW, ENCFF419RSJ, ENCFF949HEL, ENCFF991PXQ 187646 ENCODE Processing Pipeline 7852cd66283e8e5a48b2b02aaece67e0 https://www.encodeproject.org/files/ENCFF163YZB/@@download/ENCFF163YZB.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF945LXQ bed narrowPeak conservative idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF438RUW, ENCFF601IZU, ENCFF648JAT 107428 ENCODE Processing Pipeline 74dff9470dbcc23c534e9a72e1717c2c https://www.encodeproject.org/files/ENCFF945LXQ/@@download/ENCFF945LXQ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF365NKO bed narrowPeak optimal idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF438RUW, ENCFF601IZU, ENCFF648JAT 150984 ENCODE Processing Pipeline 76edeea358cea581c91fbf496c434e0a https://www.encodeproject.org/files/ENCFF365NKO/@@download/ENCFF365NKO.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth missing unfiltered alignments ENCFF361EMP bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF984NVJ 6580997 ENCODE Processing Pipeline 2299b20bf8507132afdc05f47fa6d9ae https://www.encodeproject.org/files/ENCFF361EMP/@@download/ENCFF361EMP.bed.gz hg19 released missing unfiltered alignments ENCFF830THH bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF069VLP 6570586 ENCODE Processing Pipeline 8e908668460f3de17877175ec4ff2aff https://www.encodeproject.org/files/ENCFF830THH/@@download/ENCFF830THH.bed.gz hg19 released missing unfiltered alignments ENCFF108JTM bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF069VLP, ENCFF581ZJL, ENCFF984NVJ 7209529 ENCODE Processing Pipeline da8182b7bcf60321b0c0de562530d7b3 https://www.encodeproject.org/files/ENCFF108JTM/@@download/ENCFF108JTM.bed.gz hg19 released missing unfiltered alignments ENCFF820ZHR bed narrowPeak conservative idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF108JTM, ENCFF361EMP, ENCFF830THH 75366 ENCODE Processing Pipeline 6d38cb6be34d63761a9c45259f85d192 https://www.encodeproject.org/files/ENCFF820ZHR/@@download/ENCFF820ZHR.bed.gz hg19 released missing unfiltered alignments ENCFF643TEZ bed narrowPeak optimal idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF108JTM, ENCFF361EMP, ENCFF830THH 110168 ENCODE Processing Pipeline 88bb8380a704122b98e88220e68c0d21 https://www.encodeproject.org/files/ENCFF643TEZ/@@download/ENCFF643TEZ.bed.gz hg19 released missing unfiltered alignments ENCFF037YLO bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF201MXQ, ENCFF910IKB 6471171 ENCODE Processing Pipeline b13e77a8ec9e9df200bf03f48cdec82f https://www.encodeproject.org/files/ENCFF037YLO/@@download/ENCFF037YLO.bed.gz GRCh38 released missing unfiltered alignments ENCFF474XWG bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF049RJI, ENCFF227IZS 6439941 ENCODE Processing Pipeline 6a74e53dc7a0371df3a3a792014f3e41 https://www.encodeproject.org/files/ENCFF474XWG/@@download/ENCFF474XWG.bed.gz GRCh38 released missing unfiltered alignments ENCFF214AZP bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF049RJI, ENCFF201MXQ, ENCFF227IZS, ENCFF910IKB 7187945 ENCODE Processing Pipeline 7b39406b31830920a9c3fc490e67ab97 https://www.encodeproject.org/files/ENCFF214AZP/@@download/ENCFF214AZP.bed.gz GRCh38 released missing unfiltered alignments ENCFF575VHZ bed narrowPeak conservative idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF037YLO, ENCFF214AZP, ENCFF419RSJ, ENCFF474XWG 74731 ENCODE Processing Pipeline 08d5ef79db4c86cb32b7263283fa881e https://www.encodeproject.org/files/ENCFF575VHZ/@@download/ENCFF575VHZ.bed.gz GRCh38 released missing unfiltered alignments ENCFF384ALH bed narrowPeak optimal idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF037YLO, ENCFF214AZP, ENCFF419RSJ, ENCFF474XWG 111921 ENCODE Processing Pipeline 3e1236ba63044fac20b89dfacb9f2191 https://www.encodeproject.org/files/ENCFF384ALH/@@download/ENCFF384ALH.bed.gz GRCh38 released missing unfiltered alignments ENCFF461DMV bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF259XPA 6655933 ENCODE Processing Pipeline 01a95c77831e19fba6e77544197f87e8 https://www.encodeproject.org/files/ENCFF461DMV/@@download/ENCFF461DMV.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF237YNN bed narrowPeak conservative idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF461DMV, ENCFF654PAG, ENCFF693NGB 473181 ENCODE Processing Pipeline 0dafb2fb7171a8807435302b7540e39f https://www.encodeproject.org/files/ENCFF237YNN/@@download/ENCFF237YNN.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF654PAG bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF153QLL, ENCFF259XPA 7175014 ENCODE Processing Pipeline 8d78b7c98d6cb22cf8325070ad31c89c https://www.encodeproject.org/files/ENCFF654PAG/@@download/ENCFF654PAG.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF693NGB bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF153QLL 6499306 ENCODE Processing Pipeline 331f42a9b13f9101bac8ee2dabe94a12 https://www.encodeproject.org/files/ENCFF693NGB/@@download/ENCFF693NGB.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF375RDB bed narrowPeak optimal idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF461DMV, ENCFF654PAG, ENCFF693NGB 538133 ENCODE Processing Pipeline df1598e8f6f9854c15424d47603f41b4 https://www.encodeproject.org/files/ENCFF375RDB/@@download/ENCFF375RDB.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF920IJY bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF065XRG, ENCFF581ZJL 6522057 ENCODE Processing Pipeline 5eabd6928477c3a58ca0ae21b1f17a75 https://www.encodeproject.org/files/ENCFF920IJY/@@download/ENCFF920IJY.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF634YJK bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF293ZMY 6662684 ENCODE Processing Pipeline e54b64c6a6acb14134508fc5c8ce4087 https://www.encodeproject.org/files/ENCFF634YJK/@@download/ENCFF634YJK.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF529GVQ bed narrowPeak conservative idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF343JJX, ENCFF634YJK, ENCFF920IJY 487577 ENCODE Processing Pipeline b18946ccaf1da4ada50e3619780dfc68 https://www.encodeproject.org/files/ENCFF529GVQ/@@download/ENCFF529GVQ.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF343JJX bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF065XRG, ENCFF293ZMY, ENCFF581ZJL 7206115 ENCODE Processing Pipeline cba0e2fa24564ec8b1cf8f14f0545dfe https://www.encodeproject.org/files/ENCFF343JJX/@@download/ENCFF343JJX.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF004WYV bed narrowPeak optimal idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF343JJX, ENCFF634YJK, ENCFF920IJY 557721 ENCODE Processing Pipeline f1a92ff86172ca7ec73d6ddfff66ecc4 https://www.encodeproject.org/files/ENCFF004WYV/@@download/ENCFF004WYV.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF349DOV bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF899GZH 4973568 ENCODE Processing Pipeline 5207521ced5ffdc41c59ac3c68d6ba0a https://www.encodeproject.org/files/ENCFF349DOV/@@download/ENCFF349DOV.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF076QRM bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF845YHI, ENCFF879OQC 5395752 ENCODE Processing Pipeline 1ccda4371d5402a9011ac952a3684b18 https://www.encodeproject.org/files/ENCFF076QRM/@@download/ENCFF076QRM.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF207BTX bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF335IPE, ENCFF845YHI, ENCFF879OQC, ENCFF899GZH 6661666 ENCODE Processing Pipeline 154f6e3919a5d7f5e10f183b10139295 https://www.encodeproject.org/files/ENCFF207BTX/@@download/ENCFF207BTX.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF533DZJ bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF723QZO 4678629 ENCODE Processing Pipeline 8506ba966dbf6e8327d47dadc58561c1 https://www.encodeproject.org/files/ENCFF533DZJ/@@download/ENCFF533DZJ.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF934QVF bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF019PLG, ENCFF577FNG 5179144 ENCODE Processing Pipeline 47129b10bfb1bb266476ea39936c8ae9 https://www.encodeproject.org/files/ENCFF934QVF/@@download/ENCFF934QVF.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF991DCR bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF019PLG, ENCFF156FED, ENCFF577FNG, ENCFF723QZO 6410222 ENCODE Processing Pipeline 4f2cda43258cb7efbaa7bc1b27119059 https://www.encodeproject.org/files/ENCFF991DCR/@@download/ENCFF991DCR.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF376CAG bed narrowPeak conservative idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF419RSJ, ENCFF533DZJ, ENCFF934QVF, ENCFF991DCR 50866 ENCODE Processing Pipeline 7e24417837434d49700cb933b824fd7e https://www.encodeproject.org/files/ENCFF376CAG/@@download/ENCFF376CAG.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF495BPY bed narrowPeak optimal idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF419RSJ, ENCFF533DZJ, ENCFF934QVF, ENCFF991DCR 64861 ENCODE Processing Pipeline c8c48ba855f11cafe36a2332b9f617ab https://www.encodeproject.org/files/ENCFF495BPY/@@download/ENCFF495BPY.bed.gz GRCh38 released low read depth, low read length missing unfiltered alignments ENCFF223KKR bed narrowPeak optimal idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF076QRM, ENCFF207BTX, ENCFF349DOV 56943 ENCODE Processing Pipeline 1fb0605c8d59b50eb5d2ab330e5e849b https://www.encodeproject.org/files/ENCFF223KKR/@@download/ENCFF223KKR.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF519NQW bed narrowPeak conservative idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF076QRM, ENCFF207BTX, ENCFF349DOV 43437 ENCODE Processing Pipeline 39b6c961d98a4133ee84974c428d7338 https://www.encodeproject.org/files/ENCFF519NQW/@@download/ENCFF519NQW.bed.gz hg19 released low read depth, low read length missing unfiltered alignments ENCFF533JJE bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF355RGO, ENCFF879OQC 5168158 ENCODE Processing Pipeline 0a40f43f66e87af77fa6b37d4e25d8ca https://www.encodeproject.org/files/ENCFF533JJE/@@download/ENCFF533JJE.bed.gz hg19 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF585JRW bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF136XHP, ENCFF335IPE, ENCFF355RGO, ENCFF879OQC 6606695 ENCODE Processing Pipeline 6bf3d8f04632c683cd7e18b182fce60b https://www.encodeproject.org/files/ENCFF585JRW/@@download/ENCFF585JRW.bed.gz hg19 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF965OFQ bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF136XHP, ENCFF335IPE 5138333 ENCODE Processing Pipeline ccd55d8ab868c1c9d2233bbe675e6445 https://www.encodeproject.org/files/ENCFF965OFQ/@@download/ENCFF965OFQ.bed.gz hg19 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF468IXU bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF918CSI 4909507 ENCODE Processing Pipeline 948c7e088d0b63d7a7e0c04949998116 https://www.encodeproject.org/files/ENCFF468IXU/@@download/ENCFF468IXU.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF639VZZ bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF110FDC, ENCFF156FED 4798606 ENCODE Processing Pipeline 86f56df383ec7eda19ddae203ff773f9 https://www.encodeproject.org/files/ENCFF639VZZ/@@download/ENCFF639VZZ.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF890SFW bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF110FDC, ENCFF156FED, ENCFF577FNG, ENCFF918CSI 6354971 ENCODE Processing Pipeline 91d82c0629b576a9b7d3824f68c61999 https://www.encodeproject.org/files/ENCFF890SFW/@@download/ENCFF890SFW.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF352DRR bed narrowPeak optimal idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF468IXU, ENCFF639VZZ, ENCFF890SFW 52553 ENCODE Processing Pipeline d1d7aba5f95aad6a5682208eec556e60 https://www.encodeproject.org/files/ENCFF352DRR/@@download/ENCFF352DRR.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF753LFL bed narrowPeak conservative idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF468IXU, ENCFF639VZZ, ENCFF890SFW 38960 ENCODE Processing Pipeline 7edea7a982228e98681c36c5f0be1b9b https://www.encodeproject.org/files/ENCFF753LFL/@@download/ENCFF753LFL.bed.gz GRCh38 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF427CNQ bed narrowPeak conservative idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF533JJE, ENCFF585JRW, ENCFF965OFQ 33839 ENCODE Processing Pipeline d99078965015adc3a09061142e13db44 https://www.encodeproject.org/files/ENCFF427CNQ/@@download/ENCFF427CNQ.bed.gz hg19 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF633VCV bed narrowPeak optimal idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF533JJE, ENCFF585JRW, ENCFF965OFQ 44104 ENCODE Processing Pipeline a3731781debd99421892562f126a3fee https://www.encodeproject.org/files/ENCFF633VCV/@@download/ENCFF633VCV.bed.gz hg19 released borderline replicate concordance, low read length missing unfiltered alignments ENCFF009PGQ bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF193XPY, ENCFF335IPE 5075484 ENCODE Processing Pipeline f52779d780056f5dbc75289ced0e3718 https://www.encodeproject.org/files/ENCFF009PGQ/@@download/ENCFF009PGQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF107SGI bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF558LSV, ENCFF879OQC 4674325 ENCODE Processing Pipeline 418758f943c545f62ba0589e070eb71f https://www.encodeproject.org/files/ENCFF107SGI/@@download/ENCFF107SGI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF341WWD bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF193XPY, ENCFF335IPE, ENCFF558LSV, ENCFF879OQC 6343952 ENCODE Processing Pipeline ab0ae4464d6adbbf3a01041b345c4d12 https://www.encodeproject.org/files/ENCFF341WWD/@@download/ENCFF341WWD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF394JNY bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF986KSB 4730069 ENCODE Processing Pipeline 6b16f83ead995b6253574abddec44076 https://www.encodeproject.org/files/ENCFF394JNY/@@download/ENCFF394JNY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF732IJX bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF614RBF 4393904 ENCODE Processing Pipeline 063d7843577a6d9c248ca77bc53d7dda https://www.encodeproject.org/files/ENCFF732IJX/@@download/ENCFF732IJX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF241NZQ bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF614RBF, ENCFF986KSB 6125622 ENCODE Processing Pipeline 78b6453885d6304b984e633d2aadffd9 https://www.encodeproject.org/files/ENCFF241NZQ/@@download/ENCFF241NZQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF856HYC bed narrowPeak optimal idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF241NZQ, ENCFF394JNY, ENCFF419RSJ, ENCFF732IJX 43926 ENCODE Processing Pipeline 9aeff388cdd3efa63a663f43f6a37be8 https://www.encodeproject.org/files/ENCFF856HYC/@@download/ENCFF856HYC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF319JHV bed narrowPeak conservative idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF009PGQ, ENCFF107SGI, ENCFF341WWD 39703 ENCODE Processing Pipeline bdce8eaebe3e5c93ab99ea062fbdb1e0 https://www.encodeproject.org/files/ENCFF319JHV/@@download/ENCFF319JHV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF966MVC bed narrowPeak optimal idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF009PGQ, ENCFF107SGI, ENCFF341WWD 45116 ENCODE Processing Pipeline 1567fb3dc23551e8036656e989bcb56f https://www.encodeproject.org/files/ENCFF966MVC/@@download/ENCFF966MVC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, borderline replicate concordance, low read length missing unfiltered alignments ENCFF094YIY bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF333NCC 6297379 ENCODE Processing Pipeline 642dae0844a0e8d8dd075f82b553215f https://www.encodeproject.org/files/ENCFF094YIY/@@download/ENCFF094YIY.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF501DZY bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF568FRV, ENCFF581ZJL 6216671 ENCODE Processing Pipeline 930752e7e889e06e0e3a436fa59bb5ef https://www.encodeproject.org/files/ENCFF501DZY/@@download/ENCFF501DZY.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF186VAU bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF333NCC, ENCFF568FRV, ENCFF581ZJL 7097726 ENCODE Processing Pipeline d7c9ad3f216460e2d0dd721db5ec966e https://www.encodeproject.org/files/ENCFF186VAU/@@download/ENCFF186VAU.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF817DXM bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF254IUH, ENCFF910IKB 6097340 ENCODE Processing Pipeline 91c110f53c2a075d1f90a5e9f3caa392 https://www.encodeproject.org/files/ENCFF817DXM/@@download/ENCFF817DXM.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF136BJU bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF167NVK, ENCFF227IZS 6171534 ENCODE Processing Pipeline c52340bfe4754d2535b7a9213ffc54f5 https://www.encodeproject.org/files/ENCFF136BJU/@@download/ENCFF136BJU.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF418PEX bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF167NVK, ENCFF227IZS, ENCFF254IUH, ENCFF910IKB 7069186 ENCODE Processing Pipeline 51d63d06686f5205a3d744be3053fdc2 https://www.encodeproject.org/files/ENCFF418PEX/@@download/ENCFF418PEX.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF299JOC bed narrowPeak conservative idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF136BJU, ENCFF418PEX, ENCFF419RSJ, ENCFF817DXM 254119 ENCODE Processing Pipeline 92589e53ff60a66e990c49240bfe374b https://www.encodeproject.org/files/ENCFF299JOC/@@download/ENCFF299JOC.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF713ZVD bed narrowPeak optimal idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF136BJU, ENCFF418PEX, ENCFF419RSJ, ENCFF817DXM 311438 ENCODE Processing Pipeline 7d5c422e2e0fbd38738e7f2e5ba6653d https://www.encodeproject.org/files/ENCFF713ZVD/@@download/ENCFF713ZVD.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF752DRC bed narrowPeak conservative idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF094YIY, ENCFF186VAU, ENCFF501DZY 216437 ENCODE Processing Pipeline d34a115aeb98915ee5cbc17d740e2677 https://www.encodeproject.org/files/ENCFF752DRC/@@download/ENCFF752DRC.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF410EDG bed narrowPeak optimal idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF094YIY, ENCFF186VAU, ENCFF501DZY 259215 ENCODE Processing Pipeline dcb6e6f91e09c643f12408b087773474 https://www.encodeproject.org/files/ENCFF410EDG/@@download/ENCFF410EDG.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF385LTD bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF051LWI, ENCFF606HVQ 7102147 ENCODE Processing Pipeline fd18be84207ef924b9342b60af421079 https://www.encodeproject.org/files/ENCFF385LTD/@@download/ENCFF385LTD.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF409HKO bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF581ZJL, ENCFF737QLL 7041480 ENCODE Processing Pipeline 03f4452079d0de2dd45f193dde177e9a https://www.encodeproject.org/files/ENCFF409HKO/@@download/ENCFF409HKO.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF264KUV bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF606HVQ, ENCFF737QLL 7112874 ENCODE Processing Pipeline f02236fa69e0de342ead26e968d2998a https://www.encodeproject.org/files/ENCFF264KUV/@@download/ENCFF264KUV.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF581OFS bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF702WHX 7003997 ENCODE Processing Pipeline 99bde86aa26b691a9b9937cde6c0f5cc https://www.encodeproject.org/files/ENCFF581OFS/@@download/ENCFF581OFS.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF983GOR bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF795OAZ 7078399 ENCODE Processing Pipeline 698ace53e4b4c68d26a6e00d7c312d88 https://www.encodeproject.org/files/ENCFF983GOR/@@download/ENCFF983GOR.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF871MFK bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF702WHX, ENCFF795OAZ 7148530 ENCODE Processing Pipeline 8ab8234fcc58fd060b56ae8fb59226fc https://www.encodeproject.org/files/ENCFF871MFK/@@download/ENCFF871MFK.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF086TFH bed narrowPeak conservative idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF581OFS, ENCFF871MFK, ENCFF983GOR 156026 ENCODE Processing Pipeline 3e2a35f05b37d2d39e8f35b71d5bfb9f https://www.encodeproject.org/files/ENCFF086TFH/@@download/ENCFF086TFH.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF575WFB bed narrowPeak optimal idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF581OFS, ENCFF871MFK, ENCFF983GOR 188401 ENCODE Processing Pipeline e902bd67ee5b2c86f079498a170f908d https://www.encodeproject.org/files/ENCFF575WFB/@@download/ENCFF575WFB.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF565WKY bed narrowPeak conservative idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF001TDO, ENCFF264KUV, ENCFF385LTD, ENCFF409HKO 137716 ENCODE Processing Pipeline 118789a9549ea886b6a5fad66d9cbb97 https://www.encodeproject.org/files/ENCFF565WKY/@@download/ENCFF565WKY.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF561WNI bed narrowPeak optimal idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF001TDO, ENCFF264KUV, ENCFF385LTD, ENCFF409HKO 176911 ENCODE Processing Pipeline 938fcbd1e3573ad84cdb46925b19eb89 https://www.encodeproject.org/files/ENCFF561WNI/@@download/ENCFF561WNI.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF736FJB bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF303ICH, ENCFF790TAN 6433481 ENCODE Processing Pipeline 2ca863a87d807fbd9e97da4974aad0d3 https://www.encodeproject.org/files/ENCFF736FJB/@@download/ENCFF736FJB.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF474QPI bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF041ZVD, ENCFF712WXB, ENCFF790TAN 7213523 ENCODE Processing Pipeline 7b0594e4834f351cf66ad388685b2009 https://www.encodeproject.org/files/ENCFF474QPI/@@download/ENCFF474QPI.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF526QZM bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF041ZVD, ENCFF303ICH, ENCFF712WXB, ENCFF790TAN 7253737 ENCODE Processing Pipeline 8c31af33e79e54eecf1ba0ea1a5120eb https://www.encodeproject.org/files/ENCFF526QZM/@@download/ENCFF526QZM.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF056SEM bed narrowPeak optimal idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF419RSJ, ENCFF474QPI, ENCFF526QZM, ENCFF736FJB 354148 ENCODE Processing Pipeline fe638884c76bb59409ba977becdde421 https://www.encodeproject.org/files/ENCFF056SEM/@@download/ENCFF056SEM.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF647FMI bed narrowPeak conservative idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF419RSJ, ENCFF474QPI, ENCFF526QZM, ENCFF736FJB 245187 ENCODE Processing Pipeline 9ccf94bf33c47c7a7ed30f886253b7dd https://www.encodeproject.org/files/ENCFF647FMI/@@download/ENCFF647FMI.bed.gz GRCh38 released borderline replicate concordance, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF002CMH bed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 482481 ENCODE Consortium Analysis Working Group 30682bdafd5195e37a07eb7a47a18ebf https://www.encodeproject.org/files/ENCFF002CMH/@@download/ENCFF002CMH.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, moderate library complexity, low read length missing derived_from, biological replicates with identical biosample insufficient read depth inconsistent ontology term ENCFF001VME bed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 15872 Michael Snyder, Stanford 8b8df75e28cdea9eb62cef888fd2437f https://www.encodeproject.org/files/ENCFF001VME/@@download/ENCFF001VME.bed.gz hg19 released low read depth missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CVT bed narrowPeak optimal idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 62006 ENCODE Consortium Analysis Working Group f0053fecf831b5f3782432eb66f512e0 https://www.encodeproject.org/files/ENCFF002CVT/@@download/ENCFF002CVT.bed.gz hg19 released low read depth missing derived_from, mismatched file status, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF759MWN bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF085AZW, ENCFF581ZJL 6464456 ENCODE Processing Pipeline 3e6b7da4081d167ce8628755eb7f42ae https://www.encodeproject.org/files/ENCFF759MWN/@@download/ENCFF759MWN.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF513RYS bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF295OIX 6709320 ENCODE Processing Pipeline f9c73cee15733bf6764b14d01bb16516 https://www.encodeproject.org/files/ENCFF513RYS/@@download/ENCFF513RYS.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF826QEY bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF085AZW, ENCFF295OIX, ENCFF581ZJL 7152191 ENCODE Processing Pipeline 93a0fdf61a4e8b49dfc4e0433fdf04ae https://www.encodeproject.org/files/ENCFF826QEY/@@download/ENCFF826QEY.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF803FHN bed narrowPeak optimal idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF129HSC, ENCFF419RSJ, ENCFF764SAO, ENCFF784QTQ 809457 ENCODE Processing Pipeline 7add0259e2d935a4afcb4e8316e0e26c https://www.encodeproject.org/files/ENCFF803FHN/@@download/ENCFF803FHN.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF129HSC bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF227IZS, ENCFF719FYJ 6594131 ENCODE Processing Pipeline 632ffc386ef26520be2e9ae1d6896a44 https://www.encodeproject.org/files/ENCFF129HSC/@@download/ENCFF129HSC.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF764SAO bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF883MZR, ENCFF910IKB 6314480 ENCODE Processing Pipeline 814ad53ca1c348d9a2eda0056f70a6f5 https://www.encodeproject.org/files/ENCFF764SAO/@@download/ENCFF764SAO.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF784QTQ bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF227IZS, ENCFF719FYJ, ENCFF883MZR, ENCFF910IKB 7101045 ENCODE Processing Pipeline 5d97f7d51fd84b5da95f986896fca49c https://www.encodeproject.org/files/ENCFF784QTQ/@@download/ENCFF784QTQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF207FUE bed narrowPeak conservative idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF129HSC, ENCFF419RSJ, ENCFF764SAO, ENCFF784QTQ 577300 ENCODE Processing Pipeline 47ea47bf6e2b1fcd449000357112e5d7 https://www.encodeproject.org/files/ENCFF207FUE/@@download/ENCFF207FUE.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF525YRJ bed narrowPeak conservative idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF513RYS, ENCFF759MWN, ENCFF826QEY 529867 ENCODE Processing Pipeline 02ebd3ea34b858dd25859bc0abde0ac2 https://www.encodeproject.org/files/ENCFF525YRJ/@@download/ENCFF525YRJ.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF968KBN bed narrowPeak optimal idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF513RYS, ENCFF759MWN, ENCFF826QEY 723708 ENCODE Processing Pipeline 4aad24f6ab0ecc423ff32a4a1989e087 https://www.encodeproject.org/files/ENCFF968KBN/@@download/ENCFF968KBN.bed.gz hg19 released mild to moderate bottlenecking, low read depth experiment not submitted to GEO ENCFF390GHC bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF539AVI, ENCFF581ZJL 6835475 ENCODE Processing Pipeline 1e4982da3ee81697cbcd6e206d6bd045 https://www.encodeproject.org/files/ENCFF390GHC/@@download/ENCFF390GHC.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF355OVA bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF288YZC, ENCFF539AVI, ENCFF581ZJL 7203151 ENCODE Processing Pipeline 6a309cb361febca9809b97952c196ffd https://www.encodeproject.org/files/ENCFF355OVA/@@download/ENCFF355OVA.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF903NXY bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF288YZC 6491428 ENCODE Processing Pipeline 39529d91dcd5aa5a8305a0601fdfcc31 https://www.encodeproject.org/files/ENCFF903NXY/@@download/ENCFF903NXY.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF850AYK bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF562ATM 6741243 ENCODE Processing Pipeline 68edb27a79f1b89d1d90feb09f2f9e95 https://www.encodeproject.org/files/ENCFF850AYK/@@download/ENCFF850AYK.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF455YZU bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF546ZLD 6313799 ENCODE Processing Pipeline dcd2a6f2df241f9e313cb0ca2e5336c0 https://www.encodeproject.org/files/ENCFF455YZU/@@download/ENCFF455YZU.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF046HDT bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF546ZLD, ENCFF562ATM 7160973 ENCODE Processing Pipeline 1a5e408ea4ccefb3fe976bb665b5300f https://www.encodeproject.org/files/ENCFF046HDT/@@download/ENCFF046HDT.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF161EHH bed narrowPeak conservative idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF046HDT, ENCFF419RSJ, ENCFF455YZU, ENCFF850AYK 151813 ENCODE Processing Pipeline b3f0142a013dae17f1431e4c7f05000d https://www.encodeproject.org/files/ENCFF161EHH/@@download/ENCFF161EHH.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF536LKB bed narrowPeak optimal idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF046HDT, ENCFF419RSJ, ENCFF455YZU, ENCFF850AYK 188949 ENCODE Processing Pipeline 8f6a1814b4ac0307dc16bca134697e6b https://www.encodeproject.org/files/ENCFF536LKB/@@download/ENCFF536LKB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF738XGF bed narrowPeak conservative idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF355OVA, ENCFF390GHC, ENCFF903NXY 130638 ENCODE Processing Pipeline 26afde19db8989bcb8941ebfa250e35d https://www.encodeproject.org/files/ENCFF738XGF/@@download/ENCFF738XGF.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF338HQY bed narrowPeak optimal idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF355OVA, ENCFF390GHC, ENCFF903NXY 158966 ENCODE Processing Pipeline 7a457cf032688b56edd701ad2d8a0330 https://www.encodeproject.org/files/ENCFF338HQY/@@download/ENCFF338HQY.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity, low read depth missing unfiltered alignments ENCFF436PYK bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF095UEF 6191704 ENCODE Processing Pipeline dfd4ddecf20c1deb9cf5c955f1208c50 https://www.encodeproject.org/files/ENCFF436PYK/@@download/ENCFF436PYK.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF826RWZ bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF095UEF, ENCFF481RQA, ENCFF581ZJL 6976755 ENCODE Processing Pipeline 119c463f64589438cdd39745a0d57bc8 https://www.encodeproject.org/files/ENCFF826RWZ/@@download/ENCFF826RWZ.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF766PWX bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF481RQA, ENCFF581ZJL 5925779 ENCODE Processing Pipeline 4ab6a0de3a57b3c8f5aed0957747ab0a https://www.encodeproject.org/files/ENCFF766PWX/@@download/ENCFF766PWX.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF370QHV bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF548STV 5733001 ENCODE Processing Pipeline 3a48d9cf00b3a18e1ccaef13d57a2c3e https://www.encodeproject.org/files/ENCFF370QHV/@@download/ENCFF370QHV.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF172NAU bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF350NUJ 6008035 ENCODE Processing Pipeline 91e7565e155fe24d76079c4c9ea7af8a https://www.encodeproject.org/files/ENCFF172NAU/@@download/ENCFF172NAU.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF519QJO bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF350NUJ, ENCFF548STV 6917823 ENCODE Processing Pipeline 99f229de73ee1e73c9d58312fe45fe79 https://www.encodeproject.org/files/ENCFF519QJO/@@download/ENCFF519QJO.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF264QLP bed narrowPeak conservative idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF172NAU, ENCFF370QHV, ENCFF419RSJ, ENCFF519QJO 60729 ENCODE Processing Pipeline 278fde192db149dc4113da0dc7ca0841 https://www.encodeproject.org/files/ENCFF264QLP/@@download/ENCFF264QLP.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF545WXN bed narrowPeak optimal idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF172NAU, ENCFF370QHV, ENCFF419RSJ, ENCFF519QJO 97883 ENCODE Processing Pipeline 3b9c2426564898386263afe97322ba0d https://www.encodeproject.org/files/ENCFF545WXN/@@download/ENCFF545WXN.bed.gz GRCh38 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF089MLX bed narrowPeak conservative idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF436PYK, ENCFF766PWX, ENCFF826RWZ 51333 ENCODE Processing Pipeline ce4b88de4d6b5bc3ce3cbf87ad9fe12b https://www.encodeproject.org/files/ENCFF089MLX/@@download/ENCFF089MLX.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF804ABO bed narrowPeak optimal idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF436PYK, ENCFF766PWX, ENCFF826RWZ 82785 ENCODE Processing Pipeline 148481b2344282d1938e29f26cd718b8 https://www.encodeproject.org/files/ENCFF804ABO/@@download/ENCFF804ABO.bed.gz hg19 released low read depth, moderate library complexity, mild to moderate bottlenecking missing unfiltered alignments ENCFF420MBN bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF951UTH 7005846 ENCODE Processing Pipeline 9105af60d97e15745da580d902c1dbe1 https://www.encodeproject.org/files/ENCFF420MBN/@@download/ENCFF420MBN.bed.gz hg19 released missing unfiltered alignments ENCFF980UAQ bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF581ZJL, ENCFF967XYK 6886863 ENCODE Processing Pipeline 4451bcb37eb9571933343a709a60e8de https://www.encodeproject.org/files/ENCFF980UAQ/@@download/ENCFF980UAQ.bed.gz hg19 released missing unfiltered alignments ENCFF186JNG bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF951UTH, ENCFF967XYK 7260274 ENCODE Processing Pipeline 86c6856a23182b2bae130377bc710876 https://www.encodeproject.org/files/ENCFF186JNG/@@download/ENCFF186JNG.bed.gz hg19 released missing unfiltered alignments ENCFF028FED bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF227IZS, ENCFF786MHJ, ENCFF910IKB 6938291 ENCODE Processing Pipeline 38d617012fceaa131e30058d7dc5b6d5 https://www.encodeproject.org/files/ENCFF028FED/@@download/ENCFF028FED.bed.gz GRCh38 released missing unfiltered alignments ENCFF906TXC bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF227IZS, ENCFF686ZIH, ENCFF786MHJ, ENCFF910IKB 7260939 ENCODE Processing Pipeline ca2738ca9624452db3f5f39dbe24b11b https://www.encodeproject.org/files/ENCFF906TXC/@@download/ENCFF906TXC.bed.gz GRCh38 released missing unfiltered alignments ENCFF723JDW bed narrowPeak optimal idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF028FED, ENCFF419RSJ, ENCFF906TXC, ENCFF987AHA 336190 ENCODE Processing Pipeline 22f8e676daeb979e726fc1f4d8bcdab8 https://www.encodeproject.org/files/ENCFF723JDW/@@download/ENCFF723JDW.bed.gz GRCh38 released missing unfiltered alignments ENCFF987AHA bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF686ZIH, ENCFF910IKB 6779705 ENCODE Processing Pipeline d5fb3ecd68c46f26c97a273b1dbcbdd7 https://www.encodeproject.org/files/ENCFF987AHA/@@download/ENCFF987AHA.bed.gz GRCh38 released missing unfiltered alignments ENCFF941XDH bed narrowPeak conservative idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF028FED, ENCFF419RSJ, ENCFF906TXC, ENCFF987AHA 236055 ENCODE Processing Pipeline 1a5ed1ab7cd79a64a4142eefd90aabf2 https://www.encodeproject.org/files/ENCFF941XDH/@@download/ENCFF941XDH.bed.gz GRCh38 released missing unfiltered alignments ENCFF933ZIS bed narrowPeak conservative idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF001TDO, ENCFF186JNG, ENCFF420MBN, ENCFF980UAQ 194534 ENCODE Processing Pipeline 0ac55263e7087ce526ce18e15369eebb https://www.encodeproject.org/files/ENCFF933ZIS/@@download/ENCFF933ZIS.bed.gz hg19 released missing unfiltered alignments ENCFF238MYM bed narrowPeak optimal idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF001TDO, ENCFF186JNG, ENCFF420MBN, ENCFF980UAQ 280876 ENCODE Processing Pipeline e3c5e27d52c123cb162294504181685d https://www.encodeproject.org/files/ENCFF238MYM/@@download/ENCFF238MYM.bed.gz hg19 released missing unfiltered alignments ENCFF260MCD bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF508SEX, ENCFF581ZJL 6644738 ENCODE Processing Pipeline 38fc5094fedb938a0cd694b3d2ffd88e https://www.encodeproject.org/files/ENCFF260MCD/@@download/ENCFF260MCD.bed.gz hg19 released missing unfiltered alignments ENCFF262RPX bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF621JTB 7072773 ENCODE Processing Pipeline ed8b89f25a858edca351d442df02f59a https://www.encodeproject.org/files/ENCFF262RPX/@@download/ENCFF262RPX.bed.gz hg19 released missing unfiltered alignments ENCFF530ETK bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF508SEX, ENCFF581ZJL, ENCFF621JTB 7233376 ENCODE Processing Pipeline 200d67b2045a04d5547c856cde94ac0b https://www.encodeproject.org/files/ENCFF530ETK/@@download/ENCFF530ETK.bed.gz hg19 released missing unfiltered alignments ENCFF605QGJ bed narrowPeak conservative idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF260MCD, ENCFF262RPX, ENCFF530ETK 33226 ENCODE Processing Pipeline 442aefc6145383ced59d427b142cd044 https://www.encodeproject.org/files/ENCFF605QGJ/@@download/ENCFF605QGJ.bed.gz hg19 released missing unfiltered alignments ENCFF679ITJ bed narrowPeak optimal idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF260MCD, ENCFF262RPX, ENCFF530ETK 53864 ENCODE Processing Pipeline 4809a1434ba955b7c1164f4b9f572b67 https://www.encodeproject.org/files/ENCFF679ITJ/@@download/ENCFF679ITJ.bed.gz hg19 released missing unfiltered alignments ENCFF209WCI bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF668FCG, ENCFF910IKB 6502942 ENCODE Processing Pipeline ef14b3ef0c28e0e8c859f6514c67555f https://www.encodeproject.org/files/ENCFF209WCI/@@download/ENCFF209WCI.bed.gz GRCh38 released missing unfiltered alignments ENCFF799RSQ bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF145NON, ENCFF227IZS, ENCFF910IKB 7010408 ENCODE Processing Pipeline 9439994cd87a99d3dc7df0f035af8883 https://www.encodeproject.org/files/ENCFF799RSQ/@@download/ENCFF799RSQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF483MZB bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF145NON, ENCFF227IZS, ENCFF668FCG, ENCFF910IKB 7234067 ENCODE Processing Pipeline ddec7b234e581e12173910bd3fb5d9f8 https://www.encodeproject.org/files/ENCFF483MZB/@@download/ENCFF483MZB.bed.gz GRCh38 released missing unfiltered alignments ENCFF122GOC bed narrowPeak conservative idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF209WCI, ENCFF419RSJ, ENCFF483MZB, ENCFF799RSQ 30438 ENCODE Processing Pipeline 9bc7be50679ae4d8c6eb6c09da1b758d https://www.encodeproject.org/files/ENCFF122GOC/@@download/ENCFF122GOC.bed.gz GRCh38 released missing unfiltered alignments ENCFF672PYP bed narrowPeak optimal idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF209WCI, ENCFF419RSJ, ENCFF483MZB, ENCFF799RSQ 51856 ENCODE Processing Pipeline 6c8a3fa3bb9dcefb3bb5f8c48cd57489 https://www.encodeproject.org/files/ENCFF672PYP/@@download/ENCFF672PYP.bed.gz GRCh38 released missing unfiltered alignments ENCFF671OTI bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF207OPF, ENCFF581ZJL 6525471 ENCODE Processing Pipeline a33f2e2aa0d57c1b11a69c5be5a45e49 https://www.encodeproject.org/files/ENCFF671OTI/@@download/ENCFF671OTI.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF023FAR bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF461OLA, ENCFF581ZJL 6198170 ENCODE Processing Pipeline 5c9f75fe0e7e582caaf556099b29c7c9 https://www.encodeproject.org/files/ENCFF023FAR/@@download/ENCFF023FAR.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF763LNG bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF207OPF, ENCFF461OLA, ENCFF581ZJL 6962841 ENCODE Processing Pipeline a1a112d8ec82a48b8cd6673b117f2837 https://www.encodeproject.org/files/ENCFF763LNG/@@download/ENCFF763LNG.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF567GFO bed narrowPeak conservative idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF023FAR, ENCFF671OTI, ENCFF763LNG 26218 ENCODE Processing Pipeline b296639d910bc390f29a14b93aa2e4ff https://www.encodeproject.org/files/ENCFF567GFO/@@download/ENCFF567GFO.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF772QPO bed narrowPeak optimal idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF023FAR, ENCFF671OTI, ENCFF763LNG 44388 ENCODE Processing Pipeline d43ee2f381e8065adaf48e7520a7473a https://www.encodeproject.org/files/ENCFF772QPO/@@download/ENCFF772QPO.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF765MEY bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF707JIA, ENCFF910IKB 6375117 ENCODE Processing Pipeline 8a90718803bbbd2b835c711fd2fcd7c1 https://www.encodeproject.org/files/ENCFF765MEY/@@download/ENCFF765MEY.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF549QBY bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF578CKQ, ENCFF910IKB 6057099 ENCODE Processing Pipeline 950b843f21e92580d952e40063f1dddc https://www.encodeproject.org/files/ENCFF549QBY/@@download/ENCFF549QBY.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF039XQE bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF578CKQ, ENCFF707JIA, ENCFF910IKB 6885170 ENCODE Processing Pipeline dcc2a31ca150564a4893c47cbee3f8ae https://www.encodeproject.org/files/ENCFF039XQE/@@download/ENCFF039XQE.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF549HMO bed narrowPeak conservative idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF039XQE, ENCFF419RSJ, ENCFF549QBY, ENCFF765MEY 25666 ENCODE Processing Pipeline c31e8d45e093f74fb6a7c5a7e1990ef2 https://www.encodeproject.org/files/ENCFF549HMO/@@download/ENCFF549HMO.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF207ZEK bed narrowPeak optimal idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF039XQE, ENCFF419RSJ, ENCFF549QBY, ENCFF765MEY 45021 ENCODE Processing Pipeline 55e40305c16312e404edd86ba8de8bc2 https://www.encodeproject.org/files/ENCFF207ZEK/@@download/ENCFF207ZEK.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read depth missing unfiltered alignments ENCFF001VNM bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 842930 Michael Snyder, Stanford 767c90a87cb34d7f74ae69fbd816cf74 https://www.encodeproject.org/files/ENCFF001VNM/@@download/ENCFF001VNM.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF002CWX bed narrowPeak optimal idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 265788 ENCODE Consortium Analysis Working Group 24eba98c3ea79e788b5dc044958e6784 https://www.encodeproject.org/files/ENCFF002CWX/@@download/ENCFF002CWX.bed.gz hg19 archived mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF846FXF bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF287WTN, ENCFF293UAO 4677267 ENCODE Processing Pipeline 5d04eabf7d801827ba9dd428b67b3a2a https://www.encodeproject.org/files/ENCFF846FXF/@@download/ENCFF846FXF.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF390PTY bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF287WTN, ENCFF389FCP 4432438 ENCODE Processing Pipeline ab2e3391da9694f3f4d7e4e25f9d67bf https://www.encodeproject.org/files/ENCFF390PTY/@@download/ENCFF390PTY.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF908UIY bed narrowPeak conservative idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF370WUU, ENCFF390PTY, ENCFF846FXF 245198 ENCODE Processing Pipeline ec29245560e4baf22e4e5e93fac1d297 https://www.encodeproject.org/files/ENCFF908UIY/@@download/ENCFF908UIY.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF370WUU bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF287WTN, ENCFF293UAO, ENCFF389FCP 5360627 ENCODE Processing Pipeline cccf95223313c722121027af3403818d https://www.encodeproject.org/files/ENCFF370WUU/@@download/ENCFF370WUU.bed.gz hg19 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF023PTJ bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF299HHL, ENCFF942FFX 4616294 ENCODE Processing Pipeline b5dc212377600b36c85344eddbae0ae6 https://www.encodeproject.org/files/ENCFF023PTJ/@@download/ENCFF023PTJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF642JPJ bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF168KTM, ENCFF942FFX 4442680 ENCODE Processing Pipeline 1c076edd67df6208a4e7f62fc963be72 https://www.encodeproject.org/files/ENCFF642JPJ/@@download/ENCFF642JPJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF688XON bed narrowPeak optimal idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023PTJ, ENCFF314LWQ, ENCFF419RSJ, ENCFF642JPJ 246488 ENCODE Processing Pipeline da91f0a6bf4dc7319b2c220c94ea6655 https://www.encodeproject.org/files/ENCFF688XON/@@download/ENCFF688XON.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF314LWQ bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF168KTM, ENCFF299HHL, ENCFF942FFX 5288698 ENCODE Processing Pipeline 93b6b2c7350ba9dc135184b4b9f9c7a6 https://www.encodeproject.org/files/ENCFF314LWQ/@@download/ENCFF314LWQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF137UEG bed narrowPeak peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 1 ENCFF516SFQ, ENCFF581ZJL 6893610 ENCODE Processing Pipeline 7f858a778fe7cec07de34dfec07db4fe https://www.encodeproject.org/files/ENCFF137UEG/@@download/ENCFF137UEG.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF235YVR bed narrowPeak peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF274MDK, ENCFF516SFQ, ENCFF581ZJL 7245368 ENCODE Processing Pipeline 86f7406b97eba3e25b54c1c1c7aaa660 https://www.encodeproject.org/files/ENCFF235YVR/@@download/ENCFF235YVR.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF285TLP bed narrowPeak peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF274MDK 6939853 ENCODE Processing Pipeline a20ff27b74f23bd3204f8c0d7cce3a36 https://www.encodeproject.org/files/ENCFF285TLP/@@download/ENCFF285TLP.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF651ZYJ bed narrowPeak conservative idr thresholded peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF137UEG, ENCFF235YVR, ENCFF285TLP 135363 ENCODE Processing Pipeline bf6a97af8a6ee7775d5ee19c16190788 https://www.encodeproject.org/files/ENCFF651ZYJ/@@download/ENCFF651ZYJ.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF809OEX bed narrowPeak optimal idr thresholded peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF137UEG, ENCFF235YVR, ENCFF285TLP 234269 ENCODE Processing Pipeline cf047d7e1a2046e2cde2bfe08ea658a4 https://www.encodeproject.org/files/ENCFF809OEX/@@download/ENCFF809OEX.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF650LAD bed narrowPeak peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 1 ENCFF049FZG, ENCFF910IKB 6811757 ENCODE Processing Pipeline dea73b889e66d7c7aa71820b68dea096 https://www.encodeproject.org/files/ENCFF650LAD/@@download/ENCFF650LAD.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF200TFW bed narrowPeak peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF667WHX 6851022 ENCODE Processing Pipeline 8b243d6bcdbc8e0966902a1c0d590ef2 https://www.encodeproject.org/files/ENCFF200TFW/@@download/ENCFF200TFW.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF480AAV bed narrowPeak peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 1, 2 ENCFF049FZG, ENCFF227IZS, ENCFF667WHX, ENCFF910IKB 7257740 ENCODE Processing Pipeline f72cd35003129fbb68416dfa4e620bdd https://www.encodeproject.org/files/ENCFF480AAV/@@download/ENCFF480AAV.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF588EZF bed narrowPeak optimal idr thresholded peaks ENCSR494PWZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZC3H8-human ENCAB192ZJZ DNA False 2016-10-31 ENCODE 1, 2 ENCFF200TFW, ENCFF419RSJ, ENCFF480AAV, ENCFF650LAD 142690 ENCODE Processing Pipeline 138a759e818fe9e79cd8f1bf412dbe04 https://www.encodeproject.org/files/ENCFF588EZF/@@download/ENCFF588EZF.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF001VOW bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 18033 Michael Snyder, Stanford e083514337ac09f22ea264e17f22c278 https://www.encodeproject.org/files/ENCFF001VOW/@@download/ENCFF001VOW.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF002CYE bed narrowPeak optimal idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 48537 ENCODE Consortium Analysis Working Group 199b233a57914bd4ff8cd80e03ae96bc https://www.encodeproject.org/files/ENCFF002CYE/@@download/ENCFF002CYE.bed.gz hg19 archived mixed read lengths missing derived_from, biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF797EKN bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF113JSN, ENCFF331ARQ 3236176 ENCODE Processing Pipeline 07b93e0a5afac38587f86032ead1a9d2 https://www.encodeproject.org/files/ENCFF797EKN/@@download/ENCFF797EKN.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF947WYS bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF972AUH 1865185 ENCODE Processing Pipeline 448a218d0b8b82117f2a236becd6d1c4 https://www.encodeproject.org/files/ENCFF947WYS/@@download/ENCFF947WYS.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF473ULH bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF113JSN, ENCFF331ARQ, ENCFF972AUH 4609370 ENCODE Processing Pipeline 59b892a9b152e624fb0865052d1ab77c https://www.encodeproject.org/files/ENCFF473ULH/@@download/ENCFF473ULH.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF964OWK bed narrowPeak conservative idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF473ULH, ENCFF797EKN, ENCFF947WYS 42073 ENCODE Processing Pipeline a16cbb7d4af4f373bfeb48e9baa3c968 https://www.encodeproject.org/files/ENCFF964OWK/@@download/ENCFF964OWK.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length ENCFF648NYF bed narrowPeak optimal idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens interferon gamma STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF473ULH, ENCFF797EKN, ENCFF947WYS 49746 ENCODE Processing Pipeline 2a8c734f74b99e36c8be46d2216ac62e https://www.encodeproject.org/files/ENCFF648NYF/@@download/ENCFF648NYF.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient read depth, insufficient read length