Index of /kundaje/marinovg/oak/papers/2018-ENCODE-enhancers/2016-11-16-ChIP-seq

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.MACS-2.1.0.p1e-1_model.r2016-11-16 12:11 76K 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22016-11-16 12:19 1.9M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.MACS-2.1.0.p1e-1_peaks.xls.bz22016-11-16 12:19 2.3M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.MACS-2.1.0.p1e-1_summits.bed.bz22016-11-16 12:19 1.3M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep1.MACS-2.1.0.p1e-1_model.r2016-11-16 12:04 76K 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22016-11-16 12:08 2.1M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.top100K-p-value-sort.bz22016-11-16 12:19 1.5M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.xls.bz22016-11-16 12:08 2.4M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep1.MACS-2.1.0.p1e-1_summits.bed.bz22016-11-16 12:08 1.4M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep2.MACS-2.1.0.p1e-1_model.r2016-11-16 12:05 76K 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22016-11-16 12:09 2.1M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.top100K-p-value-sort.bz22016-11-16 12:19 1.5M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.xls.bz22016-11-16 12:09 2.4M 
[ ]10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep2.MACS-2.1.0.p1e-1_summits.bed.bz22016-11-16 12:09 1.4M 
[ ]18001.lines2016-11-15 23:51 10  
[ ]18002.lines2016-11-15 23:51 10  
[ ]18003.lines2016-11-15 23:51 10  
[ ]18004.lines2016-11-15 23:51 10  
[ ]ERANGE2016-11-16 02:42 142  
[TXT]IDR-10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep-Rout.txt2016-11-16 12:47 1.3K 
[ ]IDR-10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep-em.sav.bz22016-11-16 12:47 6.6M 
[TXT]IDR-10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep-npeaks-aboveIDR.txt2016-11-16 12:47 5.9K 
[ ]IDR-10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep-overlapped-peaks.txt.bz22016-11-16 12:47 2.2M 
[ ]IDR-10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep-plot.ps2016-11-16 12:48 20K 
[ ]IDR-10Thalf-exp-H3K27ac-18002-vs-18004.pooled.sorted.pseudoRep-uri.sav.bz22016-11-16 12:45 6.5M 
[TXT]IDR-10Thalf-exp-H3K27ac-FR-vs-G3-Rout.txt2016-11-16 12:30 1.2K 
[ ]IDR-10Thalf-exp-H3K27ac-FR-vs-G3-em.sav.bz22016-11-16 12:30 6.1M 
[TXT]IDR-10Thalf-exp-H3K27ac-FR-vs-G3-npeaks-aboveIDR.txt2016-11-16 12:30 5.8K 
[ ]IDR-10Thalf-exp-H3K27ac-FR-vs-G3-overlapped-peaks.txt.bz22016-11-16 12:30 2.1M 
[ ]IDR-10Thalf-exp-H3K27ac-FR-vs-G3-plot.ps2016-11-16 12:48 20K 
[ ]IDR-10Thalf-exp-H3K27ac-FR-vs-G3-uri.sav.bz22016-11-16 12:24 6.6M 
[ ]IDR-H3K27ac-npeaks-aboveIDR.files2016-11-16 12:48 207  
[ ]IDR-H3K27ac-npeaks-aboveIDR.table2016-11-16 12:50 488  
[ ]IDR-MACS-H3K27ac-pseudoreps.condor2016-11-16 12:22 677  
[ ]IDR-MACS-H3K27ac.condor2016-11-16 11:59 612  
[ ]MACS2.1.0-IDR-pseudoreps.condor2016-11-16 11:58 1.1K 
[ ]MACS2.1.0-IDR.condor2016-11-16 11:57 939  
[ ]MACS2.1.0.condor2016-11-16 03:05 887  
[ ]NA_peaks.encodePeak2016-11-16 01:27 40  
[TXT]README.txt2016-11-16 01:27 7.5K 
[ ]Rscript.condor2016-11-15 23:51 2.0K 
[ ]SAMstats-10Thalf-exp-H3K27ac-F3_5907092339-18002.mm10.36mers2016-11-16 01:42 155  
[ ]SAMstats-10Thalf-exp-H3K27ac-F3_5907092339-18002.mm10.50mers2016-11-16 01:43 155  
[ ]SAMstats-10Thalf-exp-H3K27ac-G3_5907092340-18004.mm10.36mers2016-11-16 01:36 155  
[ ]SAMstats-10Thalf-exp-H3K27ac-G3_5907092340-18004.mm10.50mers2016-11-16 01:47 155  
[ ]SAMstats-10Thalf-exp-Input-F3_5907092325-18001.mm10.36mers2016-11-16 01:48 155  
[ ]SAMstats-10Thalf-exp-Input-F3_5907092325-18001.mm10.50mers2016-11-16 01:53 155  
[ ]SAMstats-10Thalf-exp-Input-G3_5907092326-18003.mm10.36mers2016-11-16 01:45 155  
[ ]SAMstats-10Thalf-exp-Input-G3_5907092326-18003.mm10.50mers2016-11-16 01:48 155  
[ ]SAMstats.files2016-11-16 01:19 888  
[ ]SAMstats.table2016-11-16 02:16 774  
[ ]batch-consistency-analysis.r2016-11-16 01:27 5.6K 
[ ]batch-consistency-plot-merged2.r2016-11-16 01:27 8.2K 
[ ]batch-consistency-plot.r2016-11-16 01:27 2.5K 
[ ]findall.log2016-11-16 02:34 2.4K 
[ ]functions-all-clayton-12-13.r2016-11-16 01:27 94K 
[TXT]genome_table.txt2016-11-16 01:27 376  
[TXT]idrOverlap2npk.sh2016-11-16 01:27 1.3K 
[ ]map.condor2016-11-15 23:52 4.6K 
[DIR]pdf/2016-11-16 12:16 -  
[TXT]peakCallingPipelineForIdr.txt2016-11-16 01:27 349  
[TXT]submit.idrmerge.lsf.sh2016-11-16 01:27 2.5K 
[TXT]submit.idrpair.lsf.sh2016-11-16 01:27 2.8K 
[ ]z2016-11-16 12:21 1.6K 
[ ]zz-region-stats-ERANGE2016-11-16 02:42 196  
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443