<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence+, letter_frequencies)>
<!ATTLIST training_set datafile CDATA #REQUIRED length CDATA #REQUIRED>
<!ELEMENT alphabet (letter+)>
<!ATTLIST alphabet id (amino-acid|nucleotide) #REQUIRED
                   length CDATA #REQUIRED>
<!ELEMENT ambigs (letter+)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  min_width,
  max_width,
  minic,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  prob,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_sequences,
  num_positions,
  seed,
  seqfrac,
  strands,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT minic (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT prob (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_sequences (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT seqfrac (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif+)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                llr CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                e_value CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site+)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref+)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites+)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value+)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array+)>

]>
<!-- Begin document body -->
<MEME version="4.6.1" release="Mon Mar 21 15:08:38 EST 2011">
<training_set datafile="GATA_Negs.radius75bp.fa" length="28">
<alphabet id="nucleotide" length="4">
<letter id="letter_A" symbol="A"/>
<letter id="letter_C" symbol="C"/>
<letter id="letter_G" symbol="G"/>
<letter id="letter_T" symbol="T"/>
</alphabet>
<ambigs>
<letter id="letter_B" symbol="B"/>
<letter id="letter_D" symbol="D"/>
<letter id="letter_H" symbol="H"/>
<letter id="letter_K" symbol="K"/>
<letter id="letter_M" symbol="M"/>
<letter id="letter_N" symbol="N"/>
<letter id="letter_R" symbol="R"/>
<letter id="letter_S" symbol="S"/>
<letter id="letter_U" symbol="U"/>
<letter id="letter_V" symbol="V"/>
<letter id="letter_W" symbol="W"/>
<letter id="letter_Y" symbol="Y"/>
<letter id="letter_star" symbol="*"/>
<letter id="letter_-" symbol="-"/>
<letter id="letter_X" symbol="X"/>
</ambigs>
<sequence id="sequence_0" name="chr2:27152244-27152394" length="150" weight="1.000000" />
<sequence id="sequence_1" name="chr6:88203946-88204096" length="150" weight="1.000000" />
<sequence id="sequence_2" name="chr6:38757546-38757696" length="150" weight="1.000000" />
<sequence id="sequence_3" name="chr6:38856152-38856302" length="150" weight="1.000000" />
<sequence id="sequence_4" name="chr7:92271259-92271409" length="150" weight="1.000000" />
<sequence id="sequence_5" name="chr7:90158496-90158646" length="150" weight="1.000000" />
<sequence id="sequence_6" name="chr7:108272327-108272477" length="150" weight="1.000000" />
<sequence id="sequence_7" name="chr7:69960031-69960181" length="150" weight="1.000000" />
<sequence id="sequence_8" name="chr7:127922155-127922305" length="150" weight="1.000000" />
<sequence id="sequence_9" name="chr7:67296514-67296664" length="150" weight="1.000000" />
<sequence id="sequence_10" name="chr7:71503065-71503215" length="150" weight="1.000000" />
<sequence id="sequence_11" name="chr7:71037117-71037267" length="150" weight="1.000000" />
<sequence id="sequence_12" name="chr7:100578775-100578925" length="150" weight="1.000000" />
<sequence id="sequence_13" name="chr7:106294951-106295101" length="150" weight="1.000000" />
<sequence id="sequence_14" name="chr7:66469114-66469264" length="150" weight="1.000000" />
<sequence id="sequence_15" name="chr7:105413204-105413354" length="150" weight="1.000000" />
<sequence id="sequence_16" name="chr7:68211639-68211789" length="150" weight="1.000000" />
<sequence id="sequence_17" name="chr7:103971079-103971229" length="150" weight="1.000000" />
<sequence id="sequence_18" name="chr7:83097224-83097374" length="150" weight="1.000000" />
<sequence id="sequence_19" name="chr7:70144883-70145033" length="150" weight="1.000000" />
<sequence id="sequence_20" name="chr7:81826318-81826468" length="150" weight="1.000000" />
<sequence id="sequence_21" name="chr7:66763878-66764028" length="150" weight="1.000000" />
<sequence id="sequence_22" name="chr7:83064330-83064480" length="150" weight="1.000000" />
<sequence id="sequence_23" name="chr7:66280364-66280514" length="150" weight="1.000000" />
<sequence id="sequence_24" name="chr7:63499650-63499800" length="150" weight="1.000000" />
<sequence id="sequence_25" name="chr8:122109021-122109171" length="150" weight="1.000000" />
<sequence id="sequence_26" name="chrX:150565944-150566094" length="150" weight="1.000000" />
<sequence id="sequence_27" name="chrX:150846675-150846825" length="150" weight="1.000000" />
<letter_frequencies>
<alphabet_array>
<value letter_id="letter_A">0.271</value>
<value letter_id="letter_C">0.227</value>
<value letter_id="letter_G">0.201</value>
<value letter_id="letter_T">0.300</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme GATA_Negs.radius75bp.fa -maxw 25 -dna -nmotifs 10 -maxsize 200000 -o GATA_Negs.radius75bp.meme.maxw25 </command_line>
<host>pongo</host>
<type>zoops</type>
<nmotifs>10</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<min_width>8</min_width>
<max_width>25</max_width>
<minic>    0.00</minic>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<minsites>2</minsites>
<maxsites>28</maxsites>
<wnsites>0.8</wnsites>
<prob>1</prob>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_sequences>28</num_sequences>
<num_positions>4200</num_positions>
<seed>0</seed>
<seqfrac>       1</seqfrac>
<strands>forward</strands>
<priors_file></priors_file>
<reason_for_stopping>Stopped because nmotifs = 10 reached.</reason_for_stopping>
<background_frequencies source="dataset with add-one prior applied">
<alphabet_array>
<value letter_id="letter_A">0.271</value>
<value letter_id="letter_C">0.227</value>
<value letter_id="letter_G">0.201</value>
<value letter_id="letter_T">0.300</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="1" width="14" sites="9" ic="17.2" re="18.2" llr="114" e_value="3.9e-002" bayes_threshold="9.58158" elapsed_time="2.156000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">155</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">15</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-29</value>
<value letter_id="letter_C">177</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">71</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">89</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-128</value>
<value letter_id="letter_C">-103</value>
<value letter_id="letter_G">195</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">71</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">73</value>
<value letter_id="letter_T">-43</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">103</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">114</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">214</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-128</value>
<value letter_id="letter_C">155</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-43</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">103</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">56</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-128</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-85</value>
<value letter_id="letter_T">137</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-128</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">214</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">30</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">173</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.222222</value>
<value letter_id="letter_C">0.777778</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.444444</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.555556</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.111111</value>
<value letter_id="letter_C">0.111111</value>
<value letter_id="letter_G">0.777778</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.444444</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.222222</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.555556</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.444444</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.111111</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.222222</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.555556</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.444444</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.111111</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.111111</value>
<value letter_id="letter_T">0.777778</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.111111</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.888889</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.666667</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[CT][CA][TA]G[AGT][AG]C[CT][AT]GTG[GA]G
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_8" position="106" strand="plus" pvalue="1.30e-07" >
<left_flank>AGCTGGTAGC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AAACTCTAAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="90" strand="plus" pvalue="2.19e-07" >
<left_flank>GGACACCCTG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TAGAAGGTAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="75" strand="plus" pvalue="2.19e-07" >
<left_flank>AGATTATATT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TAAATGCAGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_22" position="81" strand="plus" pvalue="3.12e-07" >
<left_flank>ATTGACCACA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CAGTTATGAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="89" strand="plus" pvalue="3.63e-07" >
<left_flank>AAGCTCTGAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GTCGTGTGCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="114" strand="plus" pvalue="5.70e-07" >
<left_flank>TCCCAGAGCC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CGCTGGGTGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_10" position="39" strand="plus" pvalue="7.75e-07" >
<left_flank>GAATTGTGTG</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TTTCAAAGAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_17" position="71" strand="plus" pvalue="3.35e-06" >
<left_flank>AAAAACATCT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GCTTTCTGAT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_19" position="14" strand="plus" pvalue="3.76e-06" >
<left_flank>AGAATGGATG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CTCATGTGTT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_2" name="2" width="25" sites="5" ic="30.0" re="30.7" llr="106" e_value="1.0e+001" bayes_threshold="9.71253" elapsed_time="4.152000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-44</value>
<value letter_id="letter_C">181</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">114</value>
<value letter_id="letter_C">81</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">56</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">158</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">56</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">100</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">199</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-44</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">141</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">181</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">81</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">100</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-44</value>
<value letter_id="letter_C">140</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">81</value>
<value letter_id="letter_G">158</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-44</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">41</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">56</value>
<value letter_id="letter_C">81</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">156</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">114</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">41</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">181</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">100</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">56</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">41</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">199</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">156</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">181</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.800000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.800000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.800000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.600000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.800000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.800000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.800000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[CA][AC][GA][TA][GC][TA][CG][TC][CAT]CT[GC][TACGA][ACG]G[AT]C[AT]C[CT][TCG][ATG][GC][AC][CT]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_22" position="35" strand="plus" pvalue="3.70e-12" >
<left_flank>CCAAGTGAGA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CATATCATCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="82" strand="plus" pvalue="2.06e-11" >
<left_flank>TCAGCCTGGA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TGAGAAATAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_25" position="103" strand="plus" pvalue="1.37e-10" >
<left_flank>AGCTCAGGCT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AAGATCGGTC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="108" strand="plus" pvalue="3.80e-10" >
<left_flank>AATTCAATTT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CCTATATAGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="7" strand="plus" pvalue="6.57e-10" >
<left_flank>TGGCTGG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TCACATTGTG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_3" name="3" width="15" sites="5" ic="19.6" re="21.3" llr="74" e_value="1.6e+002" bayes_threshold="9.00449" elapsed_time="6.044000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">56</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">158</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-44</value>
<value letter_id="letter_C">140</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-44</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">41</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">140</value>
<value letter_id="letter_G">99</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">56</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">158</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-44</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">99</value>
<value letter_id="letter_T">41</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">81</value>
<value letter_id="letter_G">158</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">141</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">114</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">41</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.600000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.600000</value>
<value letter_id="letter_G">0.400000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.400000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GG[GA][CAG][TACGA][CG]A[GA]G[GTA][GC][TC]C[AT]G
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_5" position="13" strand="plus" pvalue="2.73e-08" >
<left_flank>GTAAACCACC</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CACCTTTTAT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_17" position="107" strand="plus" pvalue="5.62e-08" >
<left_flank>TCTCCCTTGA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGCACAATCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="120" strand="plus" pvalue="5.62e-08" >
<left_flank>GCTGTAACTG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGGCAAAGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="5" strand="plus" pvalue="1.89e-07" >
<left_flank>AAGGG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGGCTCAAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="112" strand="plus" pvalue="3.26e-07" >
<left_flank>CAATATGCAA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TGTCTGCAAT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_4" name="4" width="25" sites="12" ic="19.6" re="19.3" llr="160" e_value="2.8e+002" bayes_threshold="7.85241" elapsed_time="7.840000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">136</value>
<value letter_id="letter_G">105</value>
<value letter_id="letter_T">-1023</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">-1023</value>
<value letter_id="letter_G">-127</value>
<value letter_id="letter_T">161</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-170</value>
<value letter_id="letter_C">-145</value>
<value letter_id="letter_G">205</value>
<value letter_id="letter_T">-1023</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">114</value>
<value letter_id="letter_G">73</value>
<value letter_id="letter_T">-85</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">55</value>
<value letter_id="letter_G">-127</value>
<value letter_id="letter_T">96</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-12</value>
<value letter_id="letter_C">-1023</value>
<value letter_id="letter_G">-1023</value>
<value letter_id="letter_T">132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-170</value>
<value letter_id="letter_C">-145</value>
<value letter_id="letter_G">73</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-70</value>
<value letter_id="letter_C">55</value>
<value letter_id="letter_G">-127</value>
<value letter_id="letter_T">47</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-170</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">-1023</value>
<value letter_id="letter_T">115</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-170</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">-127</value>
<value letter_id="letter_T">96</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">-1023</value>
<value letter_id="letter_G">-1023</value>
<value letter_id="letter_T">173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">73</value>
<value letter_id="letter_T">47</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-70</value>
<value letter_id="letter_C">55</value>
<value letter_id="letter_G">-27</value>
<value letter_id="letter_T">15</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">155</value>
<value letter_id="letter_G">73</value>
<value letter_id="letter_T">-1023</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">55</value>
<value letter_id="letter_G">-1023</value>
<value letter_id="letter_T">115</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-12</value>
<value letter_id="letter_C">-145</value>
<value letter_id="letter_G">-27</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-170</value>
<value letter_id="letter_C">-45</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">172</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">-1023</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">-1023</value>
<value letter_id="letter_T">-26</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">62</value>
<value letter_id="letter_C">114</value>
<value letter_id="letter_G">-127</value>
<value letter_id="letter_T">-1023</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">-145</value>
<value letter_id="letter_G">-27</value>
<value letter_id="letter_T">-26</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-170</value>
<value letter_id="letter_C">114</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">-85</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-170</value>
<value letter_id="letter_C">187</value>
<value letter_id="letter_G">-127</value>
<value letter_id="letter_T">-1023</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">172</value>
<value letter_id="letter_G">-1023</value>
<value letter_id="letter_T">-26</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1023</value>
<value letter_id="letter_C">87</value>
<value letter_id="letter_G">-1023</value>
<value letter_id="letter_T">96</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.583333</value>
<value letter_id="letter_G">0.416667</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.083333</value>
<value letter_id="letter_T">0.916667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.083333</value>
<value letter_id="letter_C">0.083333</value>
<value letter_id="letter_G">0.833333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.083333</value>
<value letter_id="letter_T">0.583333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.750000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.083333</value>
<value letter_id="letter_C">0.083333</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.166667</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.083333</value>
<value letter_id="letter_T">0.416667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.083333</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.666667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.083333</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.083333</value>
<value letter_id="letter_T">0.583333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.416667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.166667</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.666667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.083333</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.083333</value>
<value letter_id="letter_C">0.166667</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.750000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.416667</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.083333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.083333</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.083333</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.083333</value>
<value letter_id="letter_C">0.833333</value>
<value letter_id="letter_G">0.083333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.750000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.416667</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.583333</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[CG]TG[CG][TC][TA][TG][TC][TC][TC]T[TGC][CT][CG][TC][TA][TG][CG][ACT][CA][AT][CG]C[CT][TC]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_12" position="66" strand="plus" pvalue="4.32e-10" >
<left_flank>TCTGGGAAAT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GGCATTATTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="85" strand="plus" pvalue="3.16e-09" >
<left_flank>CTGATGAGAT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>TGGTTCAAGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="46" strand="plus" pvalue="1.60e-08" >
<left_flank>AAAGTTTTCT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GTCAGCCTGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="39" strand="plus" pvalue="8.57e-08" >
<left_flank>GACTCACATT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TTCCTAAAGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="24" strand="plus" pvalue="8.57e-08" >
<left_flank>CAACTAATTT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TTTAATATTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_14" position="43" strand="plus" pvalue="2.89e-07" >
<left_flank>GTTAGAACCT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CCTTCCGTGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_2" position="2" strand="plus" pvalue="8.19e-07" >
<left_flank>AG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>AGTAGTCAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="54" strand="plus" pvalue="8.81e-07" >
<left_flank>CTCGGAAAGG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AAGCTCTGAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="14" strand="plus" pvalue="8.81e-07" >
<left_flank>TCTTTTCTGG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AAGACATTCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="37" strand="plus" pvalue="1.65e-06" >
<left_flank>CTCAATGCCA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CTAATACAGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="83" strand="plus" pvalue="1.76e-06" >
<left_flank>GAAGAGGAGC</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AGAGCCTCAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="38" strand="plus" pvalue="3.08e-06" >
<left_flank>AGGAACTAGC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GTGTGATCTT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_5" name="5" width="21" sites="4" ic="26.8" re="28.3" llr="78" e_value="1.0e+003" bayes_threshold="9.82814" elapsed_time="9.516000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-12</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">131</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">131</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-12</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">190</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">-26</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">147</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-26</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-12</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">190</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">172</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">190</value>
<value letter_id="letter_T">-26</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.750000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.750000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.750000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.750000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.750000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.750000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.750000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GA[TC][TCG][GAC]C[AT][AG][GA]G[AGT][AT][TAG][GC][CG][TG]G[GT][TCG]AG
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_1" position="34" strand="plus" pvalue="5.20e-11" >
<left_flank>TATGACTATT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TGCAGTAAAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_14" position="13" strand="plus" pvalue="4.90e-10" >
<left_flank>CATGACCTGT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TTAGAACCTC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="84" strand="plus" pvalue="1.19e-09" >
<left_flank>GGATGGCAAA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCCAGGGCTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_19" position="65" strand="plus" pvalue="2.67e-09" >
<left_flank>CATGTCATTA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GTGAAGTTAA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_6" name="6" width="14" sites="4" ic="20.9" re="21.9" llr="61" e_value="1.1e+003" bayes_threshold="10.6414" elapsed_time="11.136000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-12</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">-26</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">147</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">172</value>
<value letter_id="letter_G">31</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-12</value>
<value letter_id="letter_C">14</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.750000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.750000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
CA[ACGTA]GCCC[CT]C[AC][CG][AC][TAC]C
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_16" position="130" strand="plus" pvalue="4.73e-09" >
<left_flank>ACATAAGCTT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CATGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="17" strand="plus" pvalue="3.45e-08" >
<left_flank>AGGCCTAAAA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CTTAAAAAGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="70" strand="plus" pvalue="1.71e-07" >
<left_flank>AAGCCCTTAT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TAGCCAAATG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_24" position="118" strand="plus" pvalue="2.52e-07" >
<left_flank>TAATATCACT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ACATATGTAT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_7" name="7" width="13" sites="5" ic="19.2" re="19.6" llr="68" e_value="9.2e+002" bayes_threshold="10.5364" elapsed_time="12.688000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">156</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">114</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">199</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">114</value>
<value letter_id="letter_C">81</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">140</value>
<value letter_id="letter_G">-1</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">199</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">56</value>
<value letter_id="letter_C">140</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.800000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.600000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.800000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.600000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[AT]G[AGT][GC]C[AC]A[CGT]A[GT]CT[CA]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_8" position="49" strand="plus" pvalue="1.87e-07" >
<left_flank>ATCTATCGAA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TGTGTATGAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_25" position="85" strand="plus" pvalue="2.14e-07" >
<left_flank>TCCTTCCAAG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AGGCTCCGTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_5" position="62" strand="plus" pvalue="2.41e-07" >
<left_flank>AAAAACATGG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>AGAGACACCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="120" strand="plus" pvalue="3.50e-07" >
<left_flank>TGGTTCAAGT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>ATTGTTCTTA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="94" strand="plus" pvalue="6.38e-07" >
<left_flank>TTAACTTTTC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CTTTGTCTAT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_8" name="8" width="14" sites="7" ic="17.9" re="17.4" llr="84" e_value="1.8e+003" bayes_threshold="8.93898" elapsed_time="14.184000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-92</value>
<value letter_id="letter_C">191</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">-945</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">140</value>
<value letter_id="letter_C">-945</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">-7</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-945</value>
<value letter_id="letter_C">191</value>
<value letter_id="letter_G">-49</value>
<value letter_id="letter_T">-945</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-945</value>
<value letter_id="letter_C">214</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">-945</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">66</value>
<value letter_id="letter_C">-67</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">51</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-92</value>
<value letter_id="letter_C">33</value>
<value letter_id="letter_G">-49</value>
<value letter_id="letter_T">51</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-945</value>
<value letter_id="letter_C">33</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">125</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">8</value>
<value letter_id="letter_C">-67</value>
<value letter_id="letter_G">-49</value>
<value letter_id="letter_T">51</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">166</value>
<value letter_id="letter_C">-67</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">-945</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-945</value>
<value letter_id="letter_C">-945</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">66</value>
<value letter_id="letter_C">-67</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">51</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-945</value>
<value letter_id="letter_C">214</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">-945</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-945</value>
<value letter_id="letter_C">214</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">-945</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-945</value>
<value letter_id="letter_G">-945</value>
<value letter_id="letter_T">-945</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.142857</value>
<value letter_id="letter_C">0.857143</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.714286</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.285714</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.857143</value>
<value letter_id="letter_G">0.142857</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.428571</value>
<value letter_id="letter_C">0.142857</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.428571</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.142857</value>
<value letter_id="letter_C">0.285714</value>
<value letter_id="letter_G">0.142857</value>
<value letter_id="letter_T">0.428571</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.285714</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.714286</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.285714</value>
<value letter_id="letter_C">0.142857</value>
<value letter_id="letter_G">0.142857</value>
<value letter_id="letter_T">0.428571</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.857143</value>
<value letter_id="letter_C">0.142857</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.428571</value>
<value letter_id="letter_C">0.142857</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.428571</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
C[AT]CC[AT][TC][TC][TA]AT[AT]CCA
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_5" position="28" strand="plus" pvalue="2.67e-07" >
<left_flank>CAGGGGCCAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GTCTGTCTCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="3" strand="plus" pvalue="3.27e-07" >
<left_flank>TAA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>TAACCCTGCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="4" strand="plus" pvalue="6.89e-07" >
<left_flank>AGCA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GCCTTGGAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="103" strand="plus" pvalue="8.98e-07" >
<left_flank>ATTATTTTCC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>ACATCCTGAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_14" position="108" strand="plus" pvalue="2.38e-06" >
<left_flank>AACAAGCATT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>CTATTGGTGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_26" position="124" strand="plus" pvalue="3.78e-06" >
<left_flank>ATCTCTAGAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>AATTCAAATA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="59" strand="plus" pvalue="5.81e-06" >
<left_flank>TTCCAGCATG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GTCTGATGAG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_9" name="9" width="25" sites="2" ic="40.0" re="42.9" llr="60" e_value="2.5e+003" bayes_threshold="10.7838" elapsed_time="15.676000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">131</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">73</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">131</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">131</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">131</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">131</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">88</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">131</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GGCCAG[AT]G[GT][CT][AC][AG]TG[AG][CG][AG]GCAG[AC][CG]CC
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_8" position="3" strand="plus" pvalue="3.61e-14" >
<left_flank>CAG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CAGGGAAGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_25" position="33" strand="plus" pvalue="7.02e-14" >
<left_flank>AGGTGATCAT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CTGTCATGGT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_10" name="10" width="12" sites="5" ic="18.9" re="18.6" llr="65" e_value="2.3e+003" bayes_threshold="8.13458" elapsed_time="17.120000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">188</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">114</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">99</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">199</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">114</value>
<value letter_id="letter_C">81</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">56</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">100</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">231</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">156</value>
<value letter_id="letter_C">-18</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">199</value>
<value letter_id="letter_T">-59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">213</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">173</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.400000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.800000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.800000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
A[AG]T[GT][AC][TA]G[AC]T[GT]CT
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_4" position="132" strand="plus" pvalue="8.05e-08" >
<left_flank>CTGAGTTACA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CTCCAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="91" strand="plus" pvalue="4.45e-07" >
<left_flank>CCAGTGAGTA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CCAGAAAGTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="31" strand="plus" pvalue="7.67e-07" >
<left_flank>GCTTGTCCTC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>AAGAGATTCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="125" strand="plus" pvalue="1.32e-06" >
<left_flank>TTGAGACTTC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GTCTCTACCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_18" position="15" strand="plus" pvalue="1.74e-06" >
<left_flank>TGATCAGGCT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GTCGTGAAAC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
</motifs>
<scanned_sites_summary p_thresh="0.0001">
<scanned_sites sequence_id="sequence_0" pvalue="7.26e-08" num_sites="3"><scanned_site motif_id="motif_3" strand="plus" position="5" pvalue="1.89e-07"/>
<scanned_site motif_id="motif_4" strand="plus" position="38" pvalue="3.08e-06"/>
<scanned_site motif_id="motif_7" strand="plus" position="94" pvalue="6.38e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_1" pvalue="5.05e-10" num_sites="2"><scanned_site motif_id="motif_5" strand="plus" position="34" pvalue="5.20e-11"/>
<scanned_site motif_id="motif_2" strand="plus" position="108" pvalue="3.80e-10"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_2" pvalue="2.12e-03" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="2" pvalue="8.19e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_3" pvalue="1.11e-11" num_sites="4"><scanned_site motif_id="motif_10" strand="plus" position="31" pvalue="7.67e-07"/>
<scanned_site motif_id="motif_8" strand="plus" position="59" pvalue="5.81e-06"/>
<scanned_site motif_id="motif_4" strand="plus" position="85" pvalue="3.16e-09"/>
<scanned_site motif_id="motif_7" strand="plus" position="120" pvalue="3.50e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_4" pvalue="5.55e-07" num_sites="3"><scanned_site motif_id="motif_4" strand="plus" position="24" pvalue="8.57e-08"/>
<scanned_site motif_id="motif_8" strand="plus" position="103" pvalue="8.98e-07"/>
<scanned_site motif_id="motif_10" strand="plus" position="132" pvalue="8.05e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_5" pvalue="2.46e-09" num_sites="3"><scanned_site motif_id="motif_3" strand="plus" position="13" pvalue="2.73e-08"/>
<scanned_site motif_id="motif_8" strand="plus" position="28" pvalue="2.67e-07"/>
<scanned_site motif_id="motif_7" strand="plus" position="62" pvalue="2.41e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_6" pvalue="5.82e-05" num_sites="2"><scanned_site motif_id="motif_4" strand="plus" position="37" pvalue="1.65e-06"/>
<scanned_site motif_id="motif_10" strand="plus" position="125" pvalue="1.32e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_7" pvalue="2.94e-08" num_sites="3"><scanned_site motif_id="motif_8" strand="plus" position="3" pvalue="3.27e-07"/>
<scanned_site motif_id="motif_1" strand="plus" position="75" pvalue="2.19e-07"/>
<scanned_site motif_id="motif_10" strand="plus" position="91" pvalue="4.45e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_8" pvalue="1.87e-20" num_sites="4"><scanned_site motif_id="motif_9" strand="plus" position="3" pvalue="3.61e-14"/>
<scanned_site motif_id="motif_7" strand="plus" position="49" pvalue="1.87e-07"/>
<scanned_site motif_id="motif_5" strand="plus" position="84" pvalue="1.19e-09"/>
<scanned_site motif_id="motif_1" strand="plus" position="106" pvalue="1.30e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_9" pvalue="1.87e-05" num_sites="2"><scanned_site motif_id="motif_4" strand="plus" position="14" pvalue="8.81e-07"/>
<scanned_site motif_id="motif_6" strand="plus" position="70" pvalue="1.71e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_10" pvalue="4.82e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="39" pvalue="7.75e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_11" pvalue="2.65e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_12" pvalue="2.22e-04" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="66" pvalue="4.32e-10"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_13" pvalue="5.65e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_14" pvalue="1.06e-10" num_sites="3"><scanned_site motif_id="motif_5" strand="plus" position="13" pvalue="4.90e-10"/>
<scanned_site motif_id="motif_4" strand="plus" position="43" pvalue="2.89e-07"/>
<scanned_site motif_id="motif_8" strand="plus" position="108" pvalue="2.38e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_15" pvalue="1.59e-08" num_sites="3"><scanned_site motif_id="motif_4" strand="plus" position="54" pvalue="8.81e-07"/>
<scanned_site motif_id="motif_1" strand="plus" position="89" pvalue="3.63e-07"/>
<scanned_site motif_id="motif_3" strand="plus" position="120" pvalue="5.62e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_16" pvalue="2.60e-10" num_sites="3"><scanned_site motif_id="motif_8" strand="plus" position="4" pvalue="6.89e-07"/>
<scanned_site motif_id="motif_1" strand="plus" position="90" pvalue="2.19e-07"/>
<scanned_site motif_id="motif_6" strand="plus" position="130" pvalue="4.73e-09"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_17" pvalue="3.99e-06" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="71" pvalue="3.35e-06"/>
<scanned_site motif_id="motif_3" strand="plus" position="107" pvalue="5.62e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_18" pvalue="1.29e-01" num_sites="1"><scanned_site motif_id="motif_10" strand="plus" position="15" pvalue="1.74e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_19" pvalue="3.04e-05" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="14" pvalue="3.76e-06"/>
<scanned_site motif_id="motif_5" strand="plus" position="65" pvalue="2.67e-09"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_20" pvalue="1.29e-13" num_sites="3"><scanned_site motif_id="motif_6" strand="plus" position="17" pvalue="3.45e-08"/>
<scanned_site motif_id="motif_4" strand="plus" position="46" pvalue="1.60e-08"/>
<scanned_site motif_id="motif_2" strand="plus" position="82" pvalue="2.06e-11"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_21" pvalue="7.74e-06" num_sites="2"><scanned_site motif_id="motif_4" strand="plus" position="83" pvalue="1.76e-06"/>
<scanned_site motif_id="motif_1" strand="plus" position="114" pvalue="5.70e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_22" pvalue="4.43e-11" num_sites="2"><scanned_site motif_id="motif_2" strand="plus" position="35" pvalue="3.70e-12"/>
<scanned_site motif_id="motif_1" strand="plus" position="81" pvalue="3.12e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_23" pvalue="6.07e-13" num_sites="3"><scanned_site motif_id="motif_2" strand="plus" position="7" pvalue="6.57e-10"/>
<scanned_site motif_id="motif_4" strand="plus" position="39" pvalue="8.57e-08"/>
<scanned_site motif_id="motif_3" strand="plus" position="112" pvalue="3.26e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_24" pvalue="5.85e-02" num_sites="1"><scanned_site motif_id="motif_6" strand="plus" position="118" pvalue="2.52e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_25" pvalue="1.34e-18" num_sites="3"><scanned_site motif_id="motif_9" strand="plus" position="33" pvalue="7.02e-14"/>
<scanned_site motif_id="motif_7" strand="plus" position="85" pvalue="2.14e-07"/>
<scanned_site motif_id="motif_2" strand="plus" position="103" pvalue="1.37e-10"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_26" pvalue="1.32e-01" num_sites="1"><scanned_site motif_id="motif_8" strand="plus" position="124" pvalue="3.78e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_27" pvalue="9.96e-01" num_sites="0"></scanned_sites>
</scanned_sites_summary>
</MEME>
