<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence+, letter_frequencies)>
<!ATTLIST training_set datafile CDATA #REQUIRED length CDATA #REQUIRED>
<!ELEMENT alphabet (letter+)>
<!ATTLIST alphabet id (amino-acid|nucleotide) #REQUIRED
                   length CDATA #REQUIRED>
<!ELEMENT ambigs (letter+)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  min_width,
  max_width,
  minic,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  prob,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_sequences,
  num_positions,
  seed,
  seqfrac,
  strands,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT minic (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT prob (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_sequences (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT seqfrac (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif+)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                llr CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                e_value CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site+)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref+)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites+)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value+)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array+)>

]>
<!-- Begin document body -->
<MEME version="4.6.1" release="Mon Mar 21 15:08:38 EST 2011">
<training_set datafile="GATA_Negs.radius25bp.fa" length="28">
<alphabet id="nucleotide" length="4">
<letter id="letter_A" symbol="A"/>
<letter id="letter_C" symbol="C"/>
<letter id="letter_G" symbol="G"/>
<letter id="letter_T" symbol="T"/>
</alphabet>
<ambigs>
<letter id="letter_B" symbol="B"/>
<letter id="letter_D" symbol="D"/>
<letter id="letter_H" symbol="H"/>
<letter id="letter_K" symbol="K"/>
<letter id="letter_M" symbol="M"/>
<letter id="letter_N" symbol="N"/>
<letter id="letter_R" symbol="R"/>
<letter id="letter_S" symbol="S"/>
<letter id="letter_U" symbol="U"/>
<letter id="letter_V" symbol="V"/>
<letter id="letter_W" symbol="W"/>
<letter id="letter_Y" symbol="Y"/>
<letter id="letter_star" symbol="*"/>
<letter id="letter_-" symbol="-"/>
<letter id="letter_X" symbol="X"/>
</ambigs>
<sequence id="sequence_0" name="chr2:27152294-27152344" length="50" weight="1.000000" />
<sequence id="sequence_1" name="chr6:38856202-38856252" length="50" weight="1.000000" />
<sequence id="sequence_2" name="chr6:88203996-88204046" length="50" weight="1.000000" />
<sequence id="sequence_3" name="chr6:38757596-38757646" length="50" weight="1.000000" />
<sequence id="sequence_4" name="chr7:68211689-68211739" length="50" weight="1.000000" />
<sequence id="sequence_5" name="chr7:63499700-63499750" length="50" weight="1.000000" />
<sequence id="sequence_6" name="chr7:108272377-108272427" length="50" weight="1.000000" />
<sequence id="sequence_7" name="chr7:105413254-105413304" length="50" weight="1.000000" />
<sequence id="sequence_8" name="chr7:103971129-103971179" length="50" weight="1.000000" />
<sequence id="sequence_9" name="chr7:106295001-106295051" length="50" weight="1.000000" />
<sequence id="sequence_10" name="chr7:71037167-71037217" length="50" weight="1.000000" />
<sequence id="sequence_11" name="chr7:71503115-71503165" length="50" weight="1.000000" />
<sequence id="sequence_12" name="chr7:67296564-67296614" length="50" weight="1.000000" />
<sequence id="sequence_13" name="chr7:69960081-69960131" length="50" weight="1.000000" />
<sequence id="sequence_14" name="chr7:127922205-127922255" length="50" weight="1.000000" />
<sequence id="sequence_15" name="chr7:66469164-66469214" length="50" weight="1.000000" />
<sequence id="sequence_16" name="chr7:90158546-90158596" length="50" weight="1.000000" />
<sequence id="sequence_17" name="chr7:83097274-83097324" length="50" weight="1.000000" />
<sequence id="sequence_18" name="chr7:66280414-66280464" length="50" weight="1.000000" />
<sequence id="sequence_19" name="chr7:81826368-81826418" length="50" weight="1.000000" />
<sequence id="sequence_20" name="chr7:66763928-66763978" length="50" weight="1.000000" />
<sequence id="sequence_21" name="chr7:100578825-100578875" length="50" weight="1.000000" />
<sequence id="sequence_22" name="chr7:92271309-92271359" length="50" weight="1.000000" />
<sequence id="sequence_23" name="chr7:83064380-83064430" length="50" weight="1.000000" />
<sequence id="sequence_24" name="chr7:70144933-70144983" length="50" weight="1.000000" />
<sequence id="sequence_25" name="chr8:122109071-122109121" length="50" weight="1.000000" />
<sequence id="sequence_26" name="chrX:150565994-150566044" length="50" weight="1.000000" />
<sequence id="sequence_27" name="chrX:150846725-150846775" length="50" weight="1.000000" />
<letter_frequencies>
<alphabet_array>
<value letter_id="letter_A">0.281</value>
<value letter_id="letter_C">0.223</value>
<value letter_id="letter_G">0.193</value>
<value letter_id="letter_T">0.304</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme GATA_Negs.radius25bp.fa -maxw 25 -dna -nmotifs 10 -maxsize 200000 -o GATA_Negs.radius25bp.meme.maxw25 </command_line>
<host>pongo</host>
<type>zoops</type>
<nmotifs>10</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<min_width>8</min_width>
<max_width>25</max_width>
<minic>    0.00</minic>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<minsites>2</minsites>
<maxsites>28</maxsites>
<wnsites>0.8</wnsites>
<prob>1</prob>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_sequences>28</num_sequences>
<num_positions>1400</num_positions>
<seed>0</seed>
<seqfrac>       1</seqfrac>
<strands>forward</strands>
<priors_file></priors_file>
<reason_for_stopping>Stopped because nmotifs = 10 reached.</reason_for_stopping>
<background_frequencies source="dataset with add-one prior applied">
<alphabet_array>
<value letter_id="letter_A">0.281</value>
<value letter_id="letter_C">0.223</value>
<value letter_id="letter_G">0.193</value>
<value letter_id="letter_T">0.303</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="1" width="8" sites="8" ic="11.9" re="12.5" llr="69" e_value="4.2e+000" bayes_threshold="7.224" elapsed_time="0.492000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">164</value>
<value letter_id="letter_C">-965</value>
<value letter_id="letter_G">-63</value>
<value letter_id="letter_T">-965</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-17</value>
<value letter_id="letter_C">-965</value>
<value letter_id="letter_G">196</value>
<value letter_id="letter_T">-965</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">42</value>
<value letter_id="letter_C">116</value>
<value letter_id="letter_G">-63</value>
<value letter_id="letter_T">-965</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-965</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-965</value>
<value letter_id="letter_T">-965</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">164</value>
<value letter_id="letter_C">-965</value>
<value letter_id="letter_G">-965</value>
<value letter_id="letter_T">-128</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-965</value>
<value letter_id="letter_C">17</value>
<value letter_id="letter_G">196</value>
<value letter_id="letter_T">-965</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-965</value>
<value letter_id="letter_C">-965</value>
<value letter_id="letter_G">-965</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-965</value>
<value letter_id="letter_C">-965</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-965</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.875000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.125000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.750000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.375000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.125000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.875000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.125000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.750000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
A[GA][CA]CA[GC]TG
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_23" position="35" strand="plus" pvalue="8.55e-06" >
<left_flank>ACCACACATG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGCAGTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="2" strand="plus" pvalue="1.93e-05" >
<left_flank>CA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>ATATTACCTA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_18" position="21" strand="plus" pvalue="3.66e-05" >
<left_flank>CCCTTCCTAA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TACATGTTGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_13" position="29" strand="plus" pvalue="4.91e-05" >
<left_flank>TATATTTCAG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGTAAATGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_26" position="10" strand="plus" pvalue="9.23e-05" >
<left_flank>CAGCTATACA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TTACATTTCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="37" strand="plus" pvalue="9.23e-05" >
<left_flank>TCAAGCTCTG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CTTGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_19" position="29" strand="plus" pvalue="9.97e-05" >
<left_flank>CTGTCAGCCT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TCCACTGCCG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_2" position="14" strand="plus" pvalue="1.20e-04" >
<left_flank>GTGCAGTAAA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGTGTTTAGA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_2" name="2" width="14" sites="5" ic="18.6" re="19.4" llr="67" e_value="7.9e+000" bayes_threshold="7.11894" elapsed_time="0.924000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">84</value>
<value letter_id="letter_G">163</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">109</value>
<value letter_id="letter_C">84</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">51</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">163</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-49</value>
<value letter_id="letter_C">-16</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-49</value>
<value letter_id="letter_C">84</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">-60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">163</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">184</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">105</value>
<value letter_id="letter_T">98</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.800000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.400000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[GC][AC][GA]A[TACGA][CAGTA]CCTG[GT][CG]A[TG]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_16" position="26" strand="plus" pvalue="1.78e-07" >
<left_flank>CAATAGCTAA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>TGATCTCTGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="32" strand="plus" pvalue="2.13e-07" >
<left_flank>TCTTTTCCCT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>TATT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_25" position="1" strand="plus" pvalue="2.43e-07" >
<left_flank>G</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GGTGTCAGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_24" position="22" strand="plus" pvalue="6.99e-07" >
<left_flank>TTAGATTCCA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GTGAAGTTAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_19" position="12" strand="plus" pvalue="1.18e-06" >
<left_flank>TTATTTCCTT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCTGGACAGT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_3" name="3" width="13" sites="4" ic="18.1" re="19.5" llr="54" e_value="1.1e+002" bayes_threshold="8.04985" elapsed_time="1.296000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-17</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">196</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">16</value>
<value letter_id="letter_G">137</value>
<value letter_id="letter_T">-28</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-17</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">196</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">142</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-28</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">142</value>
<value letter_id="letter_C">16</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">37</value>
<value letter_id="letter_T">-28</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">142</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">37</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-17</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">196</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.750000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.750000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.750000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.750000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.750000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.750000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[GA]GA[GCT][GA]GC[AT][AC][AGT][AG][GA]C
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_25" position="33" strand="plus" pvalue="1.09e-07" >
<left_flank>CATCCTTCCA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TCAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="10" strand="plus" pvalue="1.92e-07" >
<left_flank>CAAAAAACAT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TAAGAGACAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="20" strand="plus" pvalue="3.97e-07" >
<left_flank>TACTTGGGCA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TCTGAGCCTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_14" position="24" strand="plus" pvalue="6.72e-07" >
<left_flank>TGTATGAAGT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CACAAGGTAA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_4" name="4" width="14" sites="6" ic="17.2" re="17.1" llr="71" e_value="4.1e+002" bayes_threshold="7.87316" elapsed_time="1.648000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">25</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">179</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">137</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">137</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-42</value>
<value letter_id="letter_G">-21</value>
<value letter_id="letter_T">113</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">25</value>
<value letter_id="letter_C">58</value>
<value letter_id="letter_G">-21</value>
<value letter_id="letter_T">-86</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">116</value>
<value letter_id="letter_G">-21</value>
<value letter_id="letter_T">14</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">116</value>
<value letter_id="letter_G">137</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-21</value>
<value letter_id="letter_T">146</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">116</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">72</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">190</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-86</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.666667</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.166667</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.666667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.833333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.833333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[GA][AG][AG]AT[AC][CT][CG]CTT[CT]CT
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_1" position="30" strand="plus" pvalue="1.52e-07" >
<left_flank>CCAGTCTGAT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>ATGCCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_18" position="5" strand="plus" pvalue="4.72e-07" >
<left_flank>CTCTG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>AAAGCCACTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="11" strand="plus" pvalue="1.38e-06" >
<left_flank>TCGGCTCTGG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>TTTCCCTGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="29" strand="plus" pvalue="2.05e-06" >
<left_flank>GGGTTTGATA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CAACCAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="4" strand="plus" pvalue="5.84e-06" >
<left_flank>TCTT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>AGAGTCACTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="28" strand="plus" pvalue="6.16e-06" >
<left_flank>TCTCCTGAAC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GATTCTCT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_5" name="5" width="25" sites="5" ic="28.9" re="26.6" llr="92" e_value="8.0e+002" bayes_threshold="7.42906" elapsed_time="1.968000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">151</value>
<value letter_id="letter_C">-16</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-16</value>
<value letter_id="letter_G">163</value>
<value letter_id="letter_T">-60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-49</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">98</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">184</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-16</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">140</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">151</value>
<value letter_id="letter_C">-16</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">51</value>
<value letter_id="letter_C">-16</value>
<value letter_id="letter_G">105</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">151</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-49</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">140</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">109</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">109</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">51</value>
<value letter_id="letter_C">84</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">151</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">151</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">143</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-49</value>
<value letter_id="letter_C">84</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">109</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">-60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">51</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">5</value>
<value letter_id="letter_T">140</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-49</value>
<value letter_id="letter_C">84</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.800000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.400000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.800000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.600000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[AC][GCT][TAG]G[CT]T[TC][AC][AGC][AG][TA][AT]T[AT][ACT][AG][AG][CT][CTA][AGT]T[ATG][TG][CTA]T
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_13" position="1" strand="plus" pvalue="3.53e-10" >
<left_flank>T</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CAGAACCAGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_27" position="17" strand="plus" pvalue="5.64e-10" >
<left_flank>ATGAGCTAAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GGAACGTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_2" position="22" strand="plus" pvalue="1.59e-09" >
<left_flank>AAAGGCACTG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>AAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="23" strand="plus" pvalue="3.51e-09" >
<left_flank>GGCTTCCTTC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>AA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_22" position="5" strand="plus" pvalue="1.01e-08" >
<left_flank>TTAAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CATCAGCATA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_6" name="6" width="9" sites="2" ic="18.0" re="18.2" llr="25" e_value="1.0e+003" bayes_threshold="9.19722" elapsed_time="2.248000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
AGTGCAGTA
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_8" position="1" strand="plus" pvalue="3.27e-06" >
<left_flank>C</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>CAAAAACATC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_2" position="3" strand="plus" pvalue="3.27e-06" >
<left_flank>GTT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>AAAGGCACTG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_7" name="7" width="8" sites="4" ic="13.2" re="13.6" llr="38" e_value="1.6e+003" bayes_threshold="8.22882" elapsed_time="2.508000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">16</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">130</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-17</value>
<value letter_id="letter_C">16</value>
<value letter_id="letter_G">37</value>
<value letter_id="letter_T">-28</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.750000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
CAGCA[TC][ACGTA]C
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_1" position="2" strand="plus" pvalue="9.88e-06" >
<left_flank>TC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AGCCCCAATT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_25" position="20" strand="plus" pvalue="2.13e-05" >
<left_flank>GTCATGGTGT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TTCCAAGAGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_22" position="33" strand="plus" pvalue="3.57e-05" >
<left_flank>CATTTATCAT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CTATTATTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_26" position="40" strand="plus" pvalue="8.89e-05" >
<left_flank>ATAATCCATT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_8" name="8" width="8" sites="4" ic="14.5" re="13.6" llr="38" e_value="3.0e+003" bayes_threshold="8.22882" elapsed_time="2.764000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">16</value>
<value letter_id="letter_G">37</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.250000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[ACG]AAAACAT
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_16" position="2" strand="plus" pvalue="3.33e-05" >
<left_flank>CA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GGAGAGCAAT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="11" strand="plus" pvalue="3.33e-05" >
<left_flank>AGTGCAGTAC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CTCCTGAACA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_24" position="0" strand="plus" pvalue="5.61e-05" >
<left_flank></left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GTCATTAGAT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="15" strand="plus" pvalue="8.25e-05" >
<left_flank>TTGTGCGTCC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GAAGAGGAGC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_9" name="9" width="8" sites="2" ic="15.0" re="15.9" llr="22" e_value="2.4e+003" bayes_threshold="7.45991" elapsed_time="3.008000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">72</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">216</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
C[AT]CGGCTC
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_6" position="37" strand="plus" pvalue="7.84e-06" >
<left_flank>TTCTGTTATT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CATAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="0" strand="plus" pvalue="1.63e-05" >
<left_flank></left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TGGGAAATGT</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_10" name="10" width="11" sites="6" ic="14.5" re="14.2" llr="59" e_value="2.8e+003" bayes_threshold="6.30378" elapsed_time="3.252000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">183</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">190</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-86</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">58</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-86</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-75</value>
<value letter_id="letter_C">-42</value>
<value letter_id="letter_G">79</value>
<value letter_id="letter_T">14</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">25</value>
<value letter_id="letter_C">58</value>
<value letter_id="letter_G">79</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">237</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-75</value>
<value letter_id="letter_C">-42</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">113</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-42</value>
<value letter_id="letter_G">211</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.833333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.166667</value>
<value letter_id="letter_C">0.166667</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.166667</value>
<value letter_id="letter_C">0.166667</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.666667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.166667</value>
<value letter_id="letter_G">0.833333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
AC[AC]T[GT]T[ACG]TGTG
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_14" position="5" strand="plus" pvalue="3.94e-06" >
<left_flank>GAGCA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TATGAAGTGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="1" strand="plus" pvalue="8.65e-06" >
<left_flank>C</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TCCCAAAACA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="37" strand="plus" pvalue="1.17e-05" >
<left_flank>AAGTTAATTA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_27" position="1" strand="plus" pvalue="1.28e-05" >
<left_flank>C</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CTAATACAGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_5" position="13" strand="plus" pvalue="2.18e-05" >
<left_flank>GTATATATAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TATACATATA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="15" strand="plus" pvalue="3.93e-05" >
<left_flank>CAGTGATATT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>GCTTTGCTGA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
</motifs>
<scanned_sites_summary p_thresh="0.0001">
<scanned_sites sequence_id="sequence_0" pvalue="5.19e-02" num_sites="1"><scanned_site motif_id="motif_10" strand="plus" position="37" pvalue="1.17e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_1" pvalue="3.92e-05" num_sites="2"><scanned_site motif_id="motif_7" strand="plus" position="2" pvalue="9.88e-06"/>
<scanned_site motif_id="motif_4" strand="plus" position="30" pvalue="1.52e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_2" pvalue="7.63e-08" num_sites="2"><scanned_site motif_id="motif_6" strand="plus" position="3" pvalue="3.27e-06"/>
<scanned_site motif_id="motif_5" strand="plus" position="22" pvalue="1.59e-09"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_3" pvalue="1.02e-02" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="2" pvalue="1.93e-05"/>
<scanned_site motif_id="motif_10" strand="plus" position="15" pvalue="3.93e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_4" pvalue="5.43e-02" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="29" pvalue="2.05e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_5" pvalue="3.81e-01" num_sites="1"><scanned_site motif_id="motif_10" strand="plus" position="13" pvalue="2.18e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_6" pvalue="3.60e-02" num_sites="1"><scanned_site motif_id="motif_9" strand="plus" position="37" pvalue="7.84e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_7" pvalue="5.11e-07" num_sites="2"><scanned_site motif_id="motif_3" strand="plus" position="20" pvalue="3.97e-07"/>
<scanned_site motif_id="motif_1" strand="plus" position="37" pvalue="9.23e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_8" pvalue="2.76e-06" num_sites="3"><scanned_site motif_id="motif_6" strand="plus" position="1" pvalue="3.27e-06"/>
<scanned_site motif_id="motif_8" strand="plus" position="11" pvalue="3.33e-05"/>
<scanned_site motif_id="motif_4" strand="plus" position="28" pvalue="6.16e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_9" pvalue="8.49e-02" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="4" pvalue="5.84e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_10" pvalue="5.35e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_11" pvalue="4.82e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_12" pvalue="8.05e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_13" pvalue="2.83e-07" num_sites="2"><scanned_site motif_id="motif_5" strand="plus" position="1" pvalue="3.53e-10"/>
<scanned_site motif_id="motif_1" strand="plus" position="29" pvalue="4.91e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_14" pvalue="1.54e-04" num_sites="2"><scanned_site motif_id="motif_10" strand="plus" position="5" pvalue="3.94e-06"/>
<scanned_site motif_id="motif_3" strand="plus" position="24" pvalue="6.72e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_15" pvalue="1.89e-05" num_sites="1"><scanned_site motif_id="motif_5" strand="plus" position="23" pvalue="3.51e-09"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_16" pvalue="1.40e-08" num_sites="3"><scanned_site motif_id="motif_8" strand="plus" position="2" pvalue="3.33e-05"/>
<scanned_site motif_id="motif_3" strand="plus" position="10" pvalue="1.92e-07"/>
<scanned_site motif_id="motif_2" strand="plus" position="26" pvalue="1.78e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_17" pvalue="6.02e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_18" pvalue="8.17e-04" num_sites="2"><scanned_site motif_id="motif_4" strand="plus" position="5" pvalue="4.72e-07"/>
<scanned_site motif_id="motif_1" strand="plus" position="21" pvalue="3.66e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_19" pvalue="6.85e-04" num_sites="2"><scanned_site motif_id="motif_2" strand="plus" position="12" pvalue="1.18e-06"/>
<scanned_site motif_id="motif_1" strand="plus" position="29" pvalue="9.97e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_20" pvalue="2.91e-03" num_sites="2"><scanned_site motif_id="motif_10" strand="plus" position="1" pvalue="8.65e-06"/>
<scanned_site motif_id="motif_8" strand="plus" position="15" pvalue="8.25e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_21" pvalue="1.14e-06" num_sites="3"><scanned_site motif_id="motif_9" strand="plus" position="0" pvalue="1.63e-05"/>
<scanned_site motif_id="motif_4" strand="plus" position="11" pvalue="1.38e-06"/>
<scanned_site motif_id="motif_2" strand="plus" position="32" pvalue="2.13e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_22" pvalue="1.63e-04" num_sites="2"><scanned_site motif_id="motif_5" strand="plus" position="5" pvalue="1.01e-08"/>
<scanned_site motif_id="motif_7" strand="plus" position="33" pvalue="3.57e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_23" pvalue="2.70e-02" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="35" pvalue="8.55e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_24" pvalue="1.27e-03" num_sites="2"><scanned_site motif_id="motif_8" strand="plus" position="0" pvalue="5.61e-05"/>
<scanned_site motif_id="motif_2" strand="plus" position="22" pvalue="6.99e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_25" pvalue="5.38e-08" num_sites="3"><scanned_site motif_id="motif_2" strand="plus" position="1" pvalue="2.43e-07"/>
<scanned_site motif_id="motif_7" strand="plus" position="20" pvalue="2.13e-05"/>
<scanned_site motif_id="motif_3" strand="plus" position="33" pvalue="1.09e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_26" pvalue="1.41e-02" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="10" pvalue="9.23e-05"/>
<scanned_site motif_id="motif_7" strand="plus" position="40" pvalue="8.89e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_27" pvalue="1.87e-06" num_sites="2"><scanned_site motif_id="motif_10" strand="plus" position="1" pvalue="1.28e-05"/>
<scanned_site motif_id="motif_5" strand="plus" position="17" pvalue="5.64e-10"/>
</scanned_sites>
</scanned_sites_summary>
</MEME>
