# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SNF2_N PF00176.18 CAMPEP_0191135812 - 3.7e-63 213.1 0.0 5.1e-63 212.6 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191135812 - 8.9e-13 47.9 0.0 1.9e-12 46.8 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0191135812 - 1.3e-06 27.4 0.0 5.1e-06 25.5 0.0 1.7 1 1 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 SNF2_N PF00176.18 CAMPEP_0191156888 - 3.3e-63 213.2 0.1 4.4e-63 212.8 0.1 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191156888 - 7.3e-15 54.5 0.0 1.7e-14 53.4 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191156888 - 1.3e-05 25.1 0.0 6.7e-05 22.7 0.0 2.0 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0191156888 - 3.6e-05 23.3 0.0 7.7e-05 22.2 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.1 CAMPEP_0191156888 - 0.08 13.0 0.0 0.23 11.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain SNF2_N PF00176.18 CAMPEP_0191091348 - 4.5e-15 55.2 0.0 8e-15 54.4 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191091348 - 8e-12 44.8 0.0 7.5e-11 41.7 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 CAMPEP_0191095378 - 9.4e-49 165.8 0.0 3.6e-47 160.6 0.0 2.9 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191095378 - 1.6e-13 50.3 0.0 3.9e-13 49.0 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191095378 - 0.00019 21.3 0.6 0.19 11.5 0.0 3.2 4 0 0 4 4 4 2 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0191092718 - 9.1e-50 169.1 0.0 7.8e-49 166.0 0.0 2.3 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191092718 - 1.6e-12 47.1 0.0 3.6e-12 45.9 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191092718 - 0.00087 19.1 0.0 0.022 14.6 0.0 2.6 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DUF2089 PF09862.4 CAMPEP_0191092718 - 0.17 11.6 2.9 13 5.5 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2089) SNF2_N PF00176.18 CAMPEP_0191197350 - 2.5e-57 193.9 0.0 4.4e-57 193.1 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191197350 - 3e-15 55.8 0.0 1e-11 44.4 0.0 2.5 2 0 0 2 2 2 2 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191197350 - 5.6e-07 29.5 0.0 2.8e-06 27.3 0.0 2.2 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0191197350 - 0.0015 18.0 0.0 0.83 9.1 0.0 2.9 3 0 0 3 3 3 2 DEAD/DEAH box helicase SNF2_N PF00176.18 CAMPEP_0191094142 - 3.9e-29 101.3 0.0 3.2e-14 52.4 0.0 3.2 2 1 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191094142 - 3.7e-12 45.9 0.0 1.1e-11 44.4 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 CAMPEP_0191087566 - 1.4e-56 191.4 0.0 2e-56 190.9 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191087566 - 1.7e-13 50.2 0.0 3.2e-13 49.3 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AAA_22 PF13401.1 CAMPEP_0191087566 - 0.036 14.1 0.2 0.71 10.0 0.0 2.8 3 0 0 3 3 3 0 AAA domain DUF2279 PF10043.4 CAMPEP_0191087566 - 0.13 12.4 3.3 0.83 9.9 0.1 2.5 2 0 0 2 2 2 0 Predicted periplasmic lipoprotein (DUF2279) SNF2_N PF00176.18 CAMPEP_0191096208 - 3.3e-30 104.9 0.0 8.8e-30 103.5 0.0 1.6 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191096208 - 4.7e-15 55.2 0.0 2.2e-14 53.0 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-RING_2 PF13639.1 CAMPEP_0191096208 - 4.9e-11 42.2 4.1 4.9e-11 42.2 2.8 2.6 2 1 0 2 2 1 1 Ring finger domain zf-C3HC4_2 PF13923.1 CAMPEP_0191096208 - 7.3e-07 29.1 2.0 7.3e-07 29.1 1.4 2.8 2 1 1 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.2 CAMPEP_0191096208 - 6.2e-06 26.2 0.4 6.2e-06 26.2 0.3 2.1 2 0 0 2 2 1 1 RING-H2 zinc finger zf-C3HC4 PF00097.20 CAMPEP_0191096208 - 7.4e-06 25.5 1.6 7.4e-06 25.5 1.1 2.3 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.1 CAMPEP_0191096208 - 4.8e-05 23.0 1.9 4.8e-05 23.0 1.3 2.4 2 0 0 2 2 1 1 zinc-RING finger domain PHD PF00628.24 CAMPEP_0191096208 - 0.0011 18.5 1.3 0.0011 18.5 0.9 2.1 2 1 0 2 2 1 1 PHD-finger zf-Apc11 PF12861.2 CAMPEP_0191096208 - 0.0024 17.6 0.5 0.0081 15.9 0.3 1.9 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.1 CAMPEP_0191096208 - 0.0026 17.4 1.6 0.0026 17.4 1.1 2.8 3 1 1 4 4 3 1 Prokaryotic RING finger family 1 zf-RING_6 PF14835.1 CAMPEP_0191096208 - 0.3 10.9 2.5 1 9.2 1.7 1.9 1 1 0 1 1 1 0 zf-RING of BARD1-type protein SNF2_N PF00176.18 CAMPEP_0191196462 - 2.3e-60 203.9 0.0 2.9e-60 203.6 0.0 1.1 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191196462 - 6.8e-17 61.0 0.0 1.6e-16 59.9 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191196462 - 1.9e-05 24.5 0.0 5.8e-05 22.9 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.3 CAMPEP_0191196462 - 0.01 14.6 0.0 0.019 13.8 0.0 1.4 1 1 0 1 1 1 0 Class II histone deacetylase complex subunits 2 and 3 SNF2_N PF00176.18 CAMPEP_0191124222 - 7.8e-40 136.5 0.1 9.7e-40 136.2 0.1 1.1 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191124222 - 7.5e-15 54.5 0.2 1.9e-14 53.2 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191124222 - 0.013 15.3 0.0 0.029 14.1 0.0 1.6 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0191124222 - 0.13 11.7 0.0 0.27 10.7 0.0 1.6 1 0 0 1 1 1 0 DEAD/DEAH box helicase SNF2_N PF00176.18 CAMPEP_0191122222 - 5.4e-63 212.5 0.1 7.2e-63 212.1 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191122222 - 2.2e-14 53.0 0.1 5.2e-14 51.8 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191122222 - 2.5e-05 24.2 0.0 0.00016 21.5 0.0 2.1 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0191122222 - 0.00087 18.8 0.0 0.0018 17.8 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.1 CAMPEP_0191122222 - 0.058 13.5 0.0 0.18 11.9 0.0 1.8 1 0 0 1 1 1 0 AAA domain SNF2_N PF00176.18 CAMPEP_0191121724 - 4.4e-63 212.8 0.1 5.8e-63 212.4 0.1 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191121724 - 2.2e-14 53.0 0.1 5.2e-14 51.8 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191121724 - 1.2e-05 25.1 0.0 6.7e-05 22.7 0.0 2.0 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0191121724 - 4e-05 23.1 0.0 7.7e-05 22.2 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.1 CAMPEP_0191121724 - 0.078 13.1 0.0 0.23 11.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain SNF2_N PF00176.18 CAMPEP_0191040158 - 3.3e-56 190.2 0.0 1.3e-55 188.3 0.0 1.8 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191040158 - 2.1e-13 49.9 0.0 4.9e-13 48.7 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191040158 - 8.7e-05 22.4 0.0 0.00024 20.9 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0191183522 - 6.1e-62 209.1 0.1 9.9e-62 208.4 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191183522 - 4.1e-15 55.3 0.0 9.5e-15 54.2 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 CAMPEP_0191193240 - 2.1e-61 207.3 0.4 3.2e-61 206.7 0.3 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191193240 - 1e-13 50.9 0.0 2.2e-13 49.8 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191193240 - 7.6e-07 29.1 0.0 1.4e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.3 CAMPEP_0191193240 - 7.1e-05 21.7 0.0 0.00035 19.4 0.0 2.1 1 1 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 DEAD PF00270.24 CAMPEP_0191193240 - 0.00023 20.6 0.0 0.00042 19.8 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF2075 PF09848.4 CAMPEP_0191193240 - 0.012 14.6 0.0 0.019 13.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DUF3890 PF13029.1 CAMPEP_0191193240 - 0.033 14.2 0.2 0.081 12.9 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3890) Surfac_D-trimer PF09006.6 CAMPEP_0191193240 - 0.084 12.6 0.1 0.19 11.4 0.1 1.6 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation SNF2_N PF00176.18 CAMPEP_0191194086 - 2.6e-55 187.3 0.0 4.4e-55 186.5 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191194086 - 1.6e-12 47.0 0.0 1.3e-10 40.9 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191194086 - 1.8e-06 27.8 0.0 0.0016 18.3 0.0 2.6 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0191194086 - 0.011 15.2 0.0 0.062 12.7 0.0 2.0 2 0 0 2 2 2 0 DEAD/DEAH box helicase INTS2 PF14750.1 CAMPEP_0191194086 - 0.25 8.7 0.0 0.35 8.3 0.0 1.1 1 0 0 1 1 1 0 Integrator complex subunit 2 SNF2_N PF00176.18 CAMPEP_0191189364 - 5.9e-65 219.0 0.1 6.9e-32 110.4 0.1 2.2 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191189364 - 2.3e-13 49.7 0.0 5.5e-13 48.5 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain zf-PARP PF00645.13 CAMPEP_0191189364 - 2.6e-11 43.6 0.0 2.6e-11 43.6 0.0 2.5 3 0 0 3 3 2 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region SAP PF02037.22 CAMPEP_0191189364 - 3.4e-08 32.7 0.0 1.2e-07 31.0 0.0 2.0 1 0 0 1 1 1 1 SAP domain DEAD PF00270.24 CAMPEP_0191189364 - 9.3e-08 31.7 0.0 2.4e-06 27.1 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase zf-RING_2 PF13639.1 CAMPEP_0191189364 - 9.6e-08 31.7 1.1 9.6e-08 31.7 0.8 3.1 3 0 0 3 3 2 1 Ring finger domain ResIII PF04851.10 CAMPEP_0191189364 - 9.7e-06 25.5 0.0 0.0026 17.5 0.0 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit zf-C3HC4 PF00097.20 CAMPEP_0191189364 - 3.6e-05 23.3 0.4 3.6e-05 23.3 0.3 3.6 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.2 CAMPEP_0191189364 - 0.00027 20.9 0.6 0.00027 20.9 0.4 2.3 2 0 0 2 2 2 1 RING-H2 zinc finger zf-C2HC_2 PF13913.1 CAMPEP_0191189364 - 0.00069 19.2 0.3 0.00069 19.2 0.2 3.3 4 0 0 4 4 4 1 zinc-finger of a C2HC-type zf-C3HC4_2 PF13923.1 CAMPEP_0191189364 - 0.0056 16.6 1.0 0.0056 16.6 0.7 3.5 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) SNF2_N PF00176.18 CAMPEP_0191179102 - 4.9e-63 212.6 0.1 6.5e-63 212.2 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0191179102 - 1.3e-14 53.7 0.0 3.1e-14 52.6 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0191179102 - 2.2e-05 24.3 0.0 0.00015 21.6 0.0 2.1 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0191179102 - 0.00076 19.0 0.0 0.0016 17.9 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.1 CAMPEP_0191179102 - 0.055 13.6 0.0 0.17 12.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain