# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SNF2_N PF00176.18 CAMPEP_0194534692 - 3e-66 223.2 0.0 4.5e-66 222.6 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194534692 - 5.7e-14 51.7 0.0 1.1e-13 50.7 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain zf-RING_2 PF13639.1 CAMPEP_0194534692 - 4.8e-12 45.5 11.5 1.3e-11 44.1 8.0 1.8 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.1 CAMPEP_0194534692 - 1.4e-07 31.3 9.9 3.3e-07 30.1 6.9 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.1 CAMPEP_0194534692 - 2.5e-07 30.2 8.7 6.1e-07 29.0 6.1 1.7 1 0 0 1 1 1 1 zinc-RING finger domain ResIII PF04851.10 CAMPEP_0194534692 - 6.7e-07 29.3 0.1 4.6e-06 26.5 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit zf-rbx1 PF12678.2 CAMPEP_0194534692 - 1.1e-06 28.6 4.7 2.7e-06 27.3 3.3 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger zf-C3HC4_3 PF13920.1 CAMPEP_0194534692 - 3.1e-05 23.5 9.8 7e-05 22.4 6.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.20 CAMPEP_0194534692 - 5.7e-05 22.6 9.5 0.00013 21.4 6.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.1 CAMPEP_0194534692 - 0.0029 17.2 6.5 0.0072 16.0 4.5 1.7 1 0 0 1 1 1 1 RING-type zinc-finger DEAD_2 PF06733.10 CAMPEP_0194534692 - 0.0096 15.3 0.0 0.047 13.1 0.0 2.0 2 0 0 2 2 2 1 DEAD_2 zf-Apc11 PF12861.2 CAMPEP_0194534692 - 0.029 14.2 3.5 0.065 13.0 2.4 1.6 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger HIRAN PF08797.6 CAMPEP_0194534692 - 0.034 14.0 0.0 0.085 12.7 0.0 1.6 1 0 0 1 1 1 0 HIRAN domain zf-RING-like PF08746.6 CAMPEP_0194534692 - 0.052 13.5 7.0 0.14 12.2 4.9 1.7 1 0 0 1 1 1 0 RING-like domain zf-RING_6 PF14835.1 CAMPEP_0194534692 - 0.12 12.1 5.4 0.41 10.4 3.7 1.9 1 0 0 1 1 1 0 zf-RING of BARD1-type protein RINGv PF12906.2 CAMPEP_0194534692 - 0.35 10.9 8.9 0.93 9.5 6.1 1.7 1 0 0 1 1 1 0 RING-variant domain FANCL_C PF11793.3 CAMPEP_0194534692 - 0.41 10.6 12.2 0.22 11.4 5.0 2.6 2 0 0 2 2 2 0 FANCL C-terminal domain SNF2_N PF00176.18 CAMPEP_0194520742 - 2.8e-63 213.4 0.1 1.4e-30 106.1 0.0 2.5 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194520742 - 1.2e-14 53.8 0.0 3.5e-14 52.4 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain zf-PARP PF00645.13 CAMPEP_0194520742 - 1e-12 48.0 0.4 3.7e-12 46.3 0.0 2.3 2 0 0 2 2 1 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region zf-RING_2 PF13639.1 CAMPEP_0194520742 - 5.2e-09 35.7 1.0 5.2e-09 35.7 0.7 2.8 2 0 0 2 2 1 1 Ring finger domain DEAD PF00270.24 CAMPEP_0194520742 - 2.8e-08 33.4 0.0 1.4e-05 24.6 0.0 2.8 3 0 0 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.10 CAMPEP_0194520742 - 8.4e-07 28.9 0.1 0.004 17.0 0.0 2.9 3 0 0 3 3 3 2 Type III restriction enzyme, res subunit SAP PF02037.22 CAMPEP_0194520742 - 2.2e-06 27.0 0.1 6.8e-06 25.4 0.0 1.9 1 0 0 1 1 1 1 SAP domain zf-rbx1 PF12678.2 CAMPEP_0194520742 - 2.8e-05 24.1 0.1 0.0001 22.3 0.1 2.0 1 0 0 1 1 1 1 RING-H2 zinc finger zf-C3HC4 PF00097.20 CAMPEP_0194520742 - 3.9e-05 23.2 0.6 3.9e-05 23.2 0.4 2.4 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) AP2 PF00847.15 CAMPEP_0194520742 - 5.2e-05 23.3 0.4 0.00016 21.7 0.3 1.9 1 0 0 1 1 1 1 AP2 domain zf-C3HC4_2 PF13923.1 CAMPEP_0194520742 - 0.00051 20.0 0.9 0.00051 20.0 0.6 2.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.1 CAMPEP_0194520742 - 0.0011 18.6 0.9 0.0011 18.6 0.6 3.0 3 0 0 3 3 2 1 zinc-RING finger domain zf-Nse PF11789.3 CAMPEP_0194520742 - 0.15 11.5 1.9 0.52 9.8 0.2 2.4 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.1 CAMPEP_0194520742 - 0.4 10.4 0.0 0.4 10.4 0.0 3.4 4 1 1 5 5 5 0 RING-type zinc-finger SNF2_N PF00176.18 CAMPEP_0194524076 - 2.8e-58 197.0 0.0 3.9e-58 196.5 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194524076 - 1.9e-13 50.0 0.0 1.9e-12 46.8 0.0 2.4 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0194524076 - 1.7e-05 24.7 0.0 0.00025 20.9 0.0 2.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0194521066 - 1.1e-50 172.1 0.0 1.2e-49 168.7 0.0 2.6 2 1 0 2 2 2 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194521066 - 1.5e-13 50.4 0.1 4.3e-13 48.9 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 CAMPEP_0194554908 - 3.4e-64 216.5 0.0 5e-64 215.9 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194554908 - 2.4e-14 52.9 0.0 6.2e-14 51.6 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0194554908 - 9.5e-06 25.5 0.0 0.00012 22.0 0.0 2.5 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0194554908 - 0.017 14.5 0.0 0.064 12.7 0.0 1.9 2 0 0 2 2 2 0 DEAD/DEAH box helicase SNF2_N PF00176.18 CAMPEP_0194542324 - 1.3e-64 217.8 0.5 1.9e-64 217.3 0.3 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194542324 - 3.4e-15 55.6 0.1 1.8e-14 53.3 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0194542324 - 2.9e-10 40.2 1.1 3.9e-10 39.8 0.1 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0194542324 - 6.6e-06 25.7 0.0 2.4e-05 23.9 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase DUF2075 PF09848.4 CAMPEP_0194542324 - 0.0081 15.1 0.8 0.013 14.4 0.1 1.7 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) SNF2_N PF00176.18 CAMPEP_0194555710 - 3e-63 213.4 0.0 1.1e-62 211.5 0.0 1.9 2 0 0 2 2 2 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194555710 - 1.4e-15 56.8 0.0 3.6e-15 55.5 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0194555710 - 0.0052 15.6 0.1 0.035 12.9 0.0 2.3 2 1 0 2 2 2 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.10 CAMPEP_0194555710 - 0.061 13.1 0.0 0.49 10.2 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0194549288 - 1.1e-58 198.4 0.0 4.5e-58 196.3 0.0 1.9 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194549288 - 4.6e-12 45.6 0.0 9.8e-12 44.5 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 CAMPEP_0194549288 - 5.4e-05 22.7 0.0 0.00012 21.6 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Gal4_dimer PF03902.8 CAMPEP_0194549288 - 0.029 14.3 0.0 4.3 7.3 0.0 2.7 2 0 0 2 2 2 0 Gal4-like dimerisation domain HDA2-3 PF11496.3 CAMPEP_0194549288 - 0.099 11.4 0.0 0.17 10.6 0.0 1.3 1 0 0 1 1 1 0 Class II histone deacetylase complex subunits 2 and 3 SNF2_N PF00176.18 CAMPEP_0194555146 - 6.4e-52 176.2 0.0 8.7e-52 175.7 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0194555146 - 1.2e-11 44.2 0.0 3.1e-11 42.9 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0194555146 - 1.8e-06 26.9 0.0 3.6e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.10 CAMPEP_0194555146 - 0.00039 20.2 0.0 0.00088 19.1 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0194555146 - 0.0005 19.5 0.0 0.0013 18.2 0.0 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase